LOCUS       DADMIB010000001        89995 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.001, whole genome shotgun sequence.
ACCESSION   DADMIB010000001 DADMIB010000000
VERSION     DADMIB010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 89995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 89995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..89995
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.001"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..790
                     /locus_tag="JNZ89_000001"
     CDS             <1..790
                     /locus_tag="JNZ89_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8933998.1"
                     /translation="DSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQT
                     GVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGVWVDGMGSPSTGD
                     FHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITY
                     DCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQ
                     NGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVMVR"
     gene            complement(833..1693)
                     /gene="rsmI"
                     /locus_tag="JNZ89_000002"
     CDS             complement(833..1693)
                     /gene="rsmI"
                     /locus_tag="JNZ89_000002"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HAY8933999.1"
                     /translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAE
                     DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG
                     YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
                     AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK
                     EDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALVAEIHGVKKNA
                     LYKYALEQQG"
     gene            1757..3784
                     /locus_tag="JNZ89_000003"
     CDS             1757..3784
                     /locus_tag="JNZ89_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HAY8934000.1"
                     /translation="MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQ
                     ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKT
                     LLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
                     QEPLLGAKEKKQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP
                     DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTI
                     QQGFEAAKNIGTQPVAAQVAAADVAEQPQPQTADGVASPAQASVSDLTGDQPAAQPVP
                     VSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEEL
                     LKSNTPLNVLVLNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSS
                     LGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGTPITPRATTDSG
                     MTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGAMLYAS
                     SRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDA
                     WSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS"
     gene            3742..4137
                     /locus_tag="JNZ89_000004"
     CDS             3742..4137
                     /locus_tag="JNZ89_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HAY8934001.1"
                     /translation="MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVN
                     ERGGEIDLIMREGWTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
                     FDTVDCRFDVVAFTGNEVEWIKDAFNDHS"
     gene            4157..4747
                     /gene="diaA"
                     /locus_tag="JNZ89_000005"
     CDS             4157..4747
                     /gene="diaA"
                     /locus_tag="JNZ89_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA initiator-associating protein DiaA"
                     /protein_id="HAY8934002.1"
                     /translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI
                     LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
                     VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
                     IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD"
     gene            4757..5332
                     /gene="yraP"
                     /locus_tag="JNZ89_000006"
     CDS             4757..5332
                     /gene="yraP"
                     /locus_tag="JNZ89_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HAY8934003.1"
                     /translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
                     VDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD
                     GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
                     LVTEREAKAAADIASRVSGVKRVTTAFTFIK"
     gene            complement(5452..6003)
                     /locus_tag="JNZ89_000007"
                     /pseudo
     CDS             complement(5452..6003)
                     /locus_tag="JNZ89_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312059.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
     gene            complement(6076..6711)
                     /locus_tag="JNZ89_000008"
     CDS             complement(6076..6711)
                     /locus_tag="JNZ89_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HAY8934004.1"
                     /translation="MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGV
                     FNPHDPQLSDALAQVTEPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLG
                     AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNE
                     TLFAPLFRLLPGNWKSIDARDVARVMLAEAMRPEHEGVTILSSSELRKRAE"
     gene            6839..7357
                     /gene="yhbO"
                     /locus_tag="JNZ89_000009"
     CDS             6839..7357
                     /gene="yhbO"
                     /locus_tag="JNZ89_000009"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein/nucleic acid deglycase"
                     /protein_id="HAY8934005.1"
                     /translation="MSKKIAVLISDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVK
                     GKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFA
                     ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
                     AFNREALRLLGA"
     gene            complement(7337..7780)
                     /locus_tag="JNZ89_000010"
     CDS             complement(7337..7780)
                     /locus_tag="JNZ89_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbP family protein"
                     /protein_id="HAY8934006.1"
                     /translation="METLITISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY
                     ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYN
                     HRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA"
     gene            7831..8133
                     /gene="yhbQ"
                     /locus_tag="JNZ89_000011"
     CDS             7831..8133
                     /gene="yhbQ"
                     /locus_tag="JNZ89_000011"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708956.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage response exodeoxyribonuclease YhbQ"
                     /protein_id="HAY8934007.1"
                     /translation="MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG
                     ELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD"
     gene            complement(8120..8623)
                     /locus_tag="JNZ89_000012"
     CDS             complement(8120..8623)
                     /locus_tag="JNZ89_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY8934008.1"
                     /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
                     VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE
                     FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEY
                     HEHFNRF"
     gene            complement(8617..9141)
                     /locus_tag="JNZ89_000013"
     CDS             complement(8617..9141)
                     /locus_tag="JNZ89_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HAY8934009.1"
                     /translation="MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA
                     LDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADVSDLLMIAA
                     RKQDPDTLFFQRRLVIEGDTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
                     TAPETKQTSVGEPC"
     gene            9350..10330
                     /locus_tag="JNZ89_000014"
     CDS             9350..10330
                     /locus_tag="JNZ89_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HAY8934010.1"
                     /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
                     KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
                     AAERYPNIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL
                     EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLID
                     RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
                     SPAYVSQVAKVWRQAIDRCKADPQSAWMETLGSMSEGTQTTLGAYHRKWQ"
     gene            10339..11217
                     /locus_tag="JNZ89_000015"
     CDS             10339..11217
                     /locus_tag="JNZ89_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312067.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HAY8934011.1"
                     /translation="MKYSLGPVLWYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRA
                     TKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM
                     CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
                     QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN
                     GIQTMSGYVYNLGNELTSMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLLLTANS
                     DCNGYWRRLAGLELQA"
     gene            11423..12430
                     /locus_tag="JNZ89_000016"
     CDS             11423..12430
                     /locus_tag="JNZ89_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase-like monooxygenase"
                     /protein_id="HAY8934012.1"
                     /translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY
                     WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
                     PGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
                     YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP
                     YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGV
                     QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL
                     G"
     gene            complement(12548..13792)
                     /gene="mtr"
                     /locus_tag="JNZ89_000017"
     CDS             complement(12548..13792)
                     /gene="mtr"
                     /locus_tag="JNZ89_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HAY8934013.1"
                     /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
                     MAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
                     TYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAK
                     VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY
                     GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV
                     LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRLKTALLTFAPPV
                     VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMITLIL
                     VFGVGNALVHILSSFNLLPVYQ"
     gene            complement(13946..15835)
                     /locus_tag="JNZ89_000018"
     CDS             complement(13946..15835)
                     /locus_tag="JNZ89_000018"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH family ATP-dependent RNA helicase"
                     /protein_id="HAY8934014.1"
                     /translation="MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR
                     DVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR
                     GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE
                     MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
                     DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN
                     GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG
                     RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ
                     QQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKR
                     EFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI
                     ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPH
                     TGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRR
                     FGGDA"
     gene            complement(15828..15908)
                     /gene="yrbN"
                     /locus_tag="JNZ89_000019"
     CDS             complement(15828..15908)
                     /gene="yrbN"
                     /locus_tag="JNZ89_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YrbN"
                     /protein_id="HAY8934015.1"
                     /translation="MKIADQFHDELCRLAAINFEAHVLHG"
     gene            complement(16015..16899)
                     /gene="nlpI"
                     /locus_tag="JNZ89_000020"
     CDS             complement(16015..16899)
                     /gene="nlpI"
                     /locus_tag="JNZ89_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020802045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HAY8934016.1"
                     /translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL
                     ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
                     GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
                     PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER
                     LKADATDNTSLAEHLSETNFYLGKYYLSLGDSDSATALFKLAVANNVHNFVEHRYALL
                     ELSLLGQDQDDLAESDQQ"
     gene            complement(17008..19143)
                     /gene="pnp"
                     /locus_tag="JNZ89_000021"
     CDS             complement(17008..19143)
                     /gene="pnp"
                     /locus_tag="JNZ89_000021"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312072.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HAY8934017.1"
                     /translation="MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV
                     VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPL
                     FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ
                     YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQN
                     INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSE
                     TIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL
                     PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGM
                     VGSPKRREIGHGRLAKRSVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL
                     MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSREGISALQMD
                     IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDICEFAPRIHTIKINPDKIK
                     DVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRV
                     YTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ
                     GRIRLSIKEATEQSQPAAAPEAPAAEQGE"
     gene            complement(19391..19660)
                     /gene="rpsO"
                     /locus_tag="JNZ89_000022"
     CDS             complement(19391..19660)
                     /gene="rpsO"
                     /locus_tag="JNZ89_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HAY8934018.1"
                     /translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA
                     EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR"
     gene            complement(19809..20753)
                     /gene="truB"
                     /locus_tag="JNZ89_000023"
     CDS             complement(19809..20753)
                     /gene="truB"
                     /locus_tag="JNZ89_000023"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HAY8934019.1"
                     /translation="MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHT
                     GALDPLATGMLPICFGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT
                     FSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITIYELLF
                     IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH
                     LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
                     LEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA"
     gene            complement(20753..21154)
                     /gene="rbfA"
                     /locus_tag="JNZ89_000024"
     CDS             complement(20753..21154)
                     /gene="rbfA"
                     /locus_tag="JNZ89_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001712908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HAY8934020.1"
                     /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS
                     RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
                     LVEGMRMSNLVTSVVKHDEERRVNPDDSKED"
     gene            complement(21318..24014)
                     /gene="infB"
                     /locus_tag="JNZ89_000025"
     CDS             complement(21318..24014)
                     /gene="infB"
                     /locus_tag="JNZ89_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HAY8934021.1"
                     /translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQT
                     LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL
                     AAEEQAQREAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREA
                     AEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMA
                     EENKWTDNAEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKH
                     AESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMA
                     VKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTG
                     AAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITF
                     LDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKI
                     DKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELK
                     AVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQE
                     VLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKL
                     ENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETD
                     ATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPEL
                     KQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRF
                     KDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA"
     gene            complement(24039..25526)
                     /gene="nusA"
                     /locus_tag="JNZ89_000026"
     CDS             complement(24039..25526)
                     /gene="nusA"
                     /locus_tag="JNZ89_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HAY8934022.1"
                     /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
                     VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF
                     DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLELGNNAEA
                     VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE
                     EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW
                     DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW
                     ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFATVLVEEGFSTLEELAYVPMKEL
                     LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGIDRDLAFKLAA
                     RGVCTLEDLAEQGIDDLADIEGVTDEKAGALIMAARNICWFGDEA"
     gene            complement(25554..26006)
                     /gene="rimP"
                     /locus_tag="JNZ89_000027"
     CDS             complement(25554..26006)
                     /gene="rimP"
                     /locus_tag="JNZ89_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HAY8934023.1"
                     /translation="MSTLEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSED
                     GINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLV
                     LRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
     gene            complement(26213..26289)
                     /locus_tag="JNZ89_000028"
     tRNA            complement(26213..26289)
                     /locus_tag="JNZ89_000028"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26253..26255),aa:Met,seq:cat)
     gene            26637..27980
                     /gene="argG"
                     /locus_tag="JNZ89_000029"
     CDS             26637..27980
                     /gene="argG"
                     /locus_tag="JNZ89_000029"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HAY8934024.1"
                     /translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
                     LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
                     TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
                     DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN
                     PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSNDVEMMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
                     RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG
                     DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSATSGVPQVENMENKGQ"
     gene            complement(27988..29613)
                     /locus_tag="JNZ89_000030"
     CDS             complement(27988..29613)
                     /locus_tag="JNZ89_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HAY8934025.1"
                     /translation="MTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFF
                     VLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDP
                     DEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQ
                     FAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVR
                     DTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISGAPYTALSVP
                     LSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETV
                     YVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDAC
                     YDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHV
                     PMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDS
                     RVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG"
     gene            complement(30072..30158)
                     /locus_tag="JNZ89_000031"
     tRNA            complement(30072..30158)
                     /locus_tag="JNZ89_000031"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30122..30124),aa:Leu,seq:gag)
     gene            complement(30173..30505)
                     /gene="secG"
                     /locus_tag="JNZ89_000032"
     CDS             complement(30173..30505)
                     /gene="secG"
                     /locus_tag="JNZ89_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HAY8934026.1"
                     /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
                     SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWENLSAPAKTEQTQPAAPA
                     KPTSDIPN"
     gene            complement(30733..32070)
                     /gene="glmM"
                     /locus_tag="JNZ89_000033"
     CDS             complement(30733..32070)
                     /gene="glmM"
                     /locus_tag="JNZ89_000033"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003905541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HAY8934027.1"
                     /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
                     IIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS
                     HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE
                     FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG
                     ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQL
                     RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD
                     KTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK
                     AVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV"
     gene            complement(32063..32911)
                     /gene="folP"
                     /locus_tag="JNZ89_000034"
     CDS             complement(32063..32911)
                     /gene="folP"
                     /locus_tag="JNZ89_000034"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312083.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HAY8934028.1"
                     /translation="MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHA
                     NLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWLSVDTSKPEV
                     IRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE
                     VNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGM
                     SRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK
                     ENKRYE"
     gene            complement(33001..34935)
                     /gene="ftsH"
                     /locus_tag="JNZ89_000035"
     CDS             complement(33001..34935)
                     /gene="ftsH"
                     /locus_tag="JNZ89_000035"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HAY8934029.1"
                     /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND
                     QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI
                     FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
                     KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
                     SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
                     QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
                     MRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMIEFEKAKDKI
                     MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
                     EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG
                     FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD
                     NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRP
                     VDEPRTPNPGNTMSEQLGDK"
     gene            complement(35035..35664)
                     /gene="rlmE"
                     /locus_tag="JNZ89_000036"
     CDS             complement(35035..35664)
                     /gene="rlmE"
                     /locus_tag="JNZ89_000036"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HAY8934030.1"
                     /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
                     SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
                     ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
                     FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP"
     gene            35790..36083
                     /gene="yhbY"
                     /locus_tag="JNZ89_000037"
     CDS             35790..36083
                     /gene="yhbY"
                     /locus_tag="JNZ89_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HAY8934031.1"
                     /translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH
                     ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
     gene            complement(36240..36716)
                     /gene="greA"
                     /locus_tag="JNZ89_000038"
     CDS             complement(36240..36716)
                     /gene="greA"
                     /locus_tag="JNZ89_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006178768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HAY8934032.1"
                     /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE
                     QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL"
     gene            36964..38397
                     /gene="dacB"
                     /locus_tag="JNZ89_000039"
     CDS             36964..38397
                     /gene="dacB"
                     /locus_tag="JNZ89_000039"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HAY8934033.1"
                     /translation="MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVG
                     ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV
                     ARFGADPTLKRQDIRNMIATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF
                     SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
                     LDVIPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR
                     QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD
                     AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
                     AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
                     EPADQRNRRIPLVRFESRLYKDIYQNN"
     gene            complement(38437..39609)
                     /gene="cgtA"
                     /locus_tag="JNZ89_000040"
     CDS             complement(38437..39609)
                     /gene="cgtA"
                     /locus_tag="JNZ89_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HAY8934034.1"
                     /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
                     VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
                     ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA
                     DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI
                     EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAK
                     PRWLVFNKIDLLDKAEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE
                     NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR"
     gene            complement(39625..40590)
                     /locus_tag="JNZ89_000041"
     CDS             complement(39625..40590)
                     /locus_tag="JNZ89_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012135318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY8934035.1"
                     /translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL
                     MASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ
                     VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWG
                     VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ
                     LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR
                     PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE"
     gene            complement(40717..40974)
                     /gene="rpmA"
                     /locus_tag="JNZ89_000042"
     CDS             complement(40717..40974)
                     /gene="rpmA"
                     /locus_tag="JNZ89_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HAY8934036.1"
                     /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE"
     gene            complement(40995..41306)
                     /gene="rplU"
                     /locus_tag="JNZ89_000043"
     CDS             complement(40995..41306)
                     /gene="rplU"
                     /locus_tag="JNZ89_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HAY8934037.1"
                     /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG
                     EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
                     A"
     gene            41565..42536
                     /gene="ispB"
                     /locus_tag="JNZ89_000044"
     CDS             41565..42536
                     /gene="ispB"
                     /locus_tag="JNZ89_000044"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HAY8934038.1"
                     /translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG
                     KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
                     FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
                     ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA
                     DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN
                     ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR"
     gene            42764..43042
                     /gene="sfsB"
                     /locus_tag="JNZ89_000045"
     CDS             42764..43042
                     /gene="sfsB"
                     /locus_tag="JNZ89_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SfsB"
                     /protein_id="HAY8934039.1"
                     /translation="MESNFIDWHPPDIIAGLRKKGTSMAAESRRNGLSSSTLANALSR
                     PWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK"
     gene            complement(43090..44349)
                     /gene="murA"
                     /locus_tag="JNZ89_000046"
     CDS             complement(43090..44349)
                     /gene="murA"
                     /locus_tag="JNZ89_000046"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HAY8934040.1"
                     /translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
                     PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA
                     RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
                     VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV
                     ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
                     EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
                     VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
                     YHIDRGYERIEDKLRALGANIKRVKGE"
     gene            complement(44404..44658)
                     /gene="ibaG"
                     /locus_tag="JNZ89_000047"
     CDS             complement(44404..44658)
                     /gene="ibaG"
                     /locus_tag="JNZ89_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015585657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family iron metabolism protein IbaG"
                     /protein_id="HAY8934041.1"
                     /translation="MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVK
                     KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
     gene            complement(44818..45111)
                     /gene="mlaB"
                     /locus_tag="JNZ89_000048"
     CDS             complement(44818..45111)
                     /gene="mlaB"
                     /locus_tag="JNZ89_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312097.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HAY8934042.1"
                     /translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDL
                     SRVSRVDTGGLALLLHLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR"
     gene            complement(45111..45746)
                     /gene="mlaC"
                     /locus_tag="JNZ89_000049"
     CDS             complement(45111..45746)
                     /gene="mlaC"
                     /locus_tag="JNZ89_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HAY8934043.1"
                     /translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN
                     EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK
                     QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
                     WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK"
     gene            complement(45765..46316)
                     /gene="mlaD"
                     /locus_tag="JNZ89_000050"
     CDS             complement(45765..46316)
                     /gene="mlaD"
                     /locus_tag="JNZ89_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HAY8934044.1"
                     /translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYA
                     TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR
                     TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK
                     NSGDAPAAAPGNNETTEPVGTTK"
     gene            complement(46321..47103)
                     /gene="mlaE"
                     /locus_tag="JNZ89_000051"
     CDS             complement(46321..47103)
                     /gene="mlaE"
                     /locus_tag="JNZ89_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HAY8934045.1"
                     /translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL
                     VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
                     VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV
                     IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL
                     FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN"
     gene            complement(47111..47920)
                     /gene="mlaF"
                     /locus_tag="JNZ89_000052"
     CDS             complement(47111..47920)
                     /gene="mlaF"
                     /locus_tag="JNZ89_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HAY8934046.1"
                     /translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG
                     IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
                     FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
                     LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL
                     ADKKIVAHGCAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS"
     gene            48130..49107
                     /locus_tag="JNZ89_000053"
     CDS             48130..49107
                     /locus_tag="JNZ89_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HAY8934047.1"
                     /translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV
                     VSIGTSLPEIIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR
                     RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTR
                     EQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAI
                     GTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDY
                     SVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE"
     gene            49121..50107
                     /gene="kdsD"
                     /locus_tag="JNZ89_000054"
     CDS             49121..50107
                     /gene="kdsD"
                     /locus_tag="JNZ89_000054"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase KdsD"
                     /protein_id="HAY8934048.1"
                     /translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK
                     MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIA
                     ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP
                     TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH
                     VKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADV
                     MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV"
     gene            50128..50694
                     /gene="kdsC"
                     /locus_tag="JNZ89_000055"
     CDS             50128..50694
                     /gene="kdsC"
                     /locus_tag="JNZ89_000055"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HAY8934049.1"
                     /translation="MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYM
                     GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
                     LIAFSELLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA
                     GGRGAVREVCDLLLLAQGKLDEAKGQSI"
     gene            50691..51266
                     /gene="lptC"
                     /locus_tag="JNZ89_000056"
     CDS             50691..51266
                     /gene="lptC"
                     /locus_tag="JNZ89_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HAY8934050.1"
                     /translation="MSKARRWVTIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS
                     EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK
                     LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG
                     LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
     gene            51235..51792
                     /gene="lptA"
                     /locus_tag="JNZ89_000057"
     CDS             51235..51792
                     /gene="lptA"
                     /locus_tag="JNZ89_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide ABC transporter
                     substrate-binding protein LptA"
                     /protein_id="HAY8934051.1"
                     /translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS
                     LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG
                     KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV
                     TTVLVPSQLQDKNNKGQTPAQKKGN"
     gene            51799..52524
                     /gene="lptB"
                     /locus_tag="JNZ89_000058"
     CDS             51799..52524
                     /gene="lptB"
                     /locus_tag="JNZ89_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004091254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HAY8934052.1"
                     /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
                     TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
                     LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
                     GTPTEILQDEHVKRVYLGEDFRL"
     gene            52572..54005
                     /gene="rpoN"
                     /locus_tag="JNZ89_000059"
     CDS             52572..54005
                     /gene="rpoN"
                     /locus_tag="JNZ89_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HAY8934053.1"
                     /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN
                     PLLEQIDTHEEIDTSETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSG
                     DYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLED
                     ILESMGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL
                     IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
                     LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE
                     SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
                     PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
                     IMVARRTVAKYRESLSIPPSNQRKQLV"
     gene            54028..54315
                     /gene="hpf"
                     /locus_tag="JNZ89_000060"
     CDS             54028..54315
                     /gene="hpf"
                     /locus_tag="JNZ89_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation promoting factor"
                     /protein_id="HAY8934054.1"
                     /translation="MQLNITGNNVEITEALREFVRAKFAKLEQYFDRINQVYVVLKVE
                     KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH"
     gene            54433..54924
                     /gene="ptsN"
                     /locus_tag="JNZ89_000061"
     CDS             54433..54924
                     /gene="ptsN"
                     /locus_tag="JNZ89_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HAY8934055.1"
                     /translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS
                     LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
                     PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP
                     DEA"
     gene            54970..55824
                     /gene="rapZ"
                     /locus_tag="JNZ89_000062"
     CDS             54970..55824
                     /gene="rapZ"
                     /locus_tag="JNZ89_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HAY8934056.1"
                     /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
                     ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
                     HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
                     TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
                     IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
                     RTLEKRKP"
     gene            55821..56093
                     /gene="npr"
                     /locus_tag="JNZ89_000063"
     CDS             55821..56093
                     /gene="npr"
                     /locus_tag="JNZ89_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS phosphocarrier protein NPr"
                     /protein_id="HAY8934057.1"
                     /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
                     EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED"
     gene            56307..56939
                     /gene="yrbL"
                     /locus_tag="JNZ89_000064"
     CDS             56307..56939
                     /gene="yrbL"
                     /locus_tag="JNZ89_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP regulatory network protein YrbL"
                     /protein_id="HAY8934058.1"
                     /translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIR
                     RELKYYAYLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR
                     YEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHHISESEVIPVVCDNIGESTLI
                     PLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA"
     gene            complement(56936..57664)
                     /gene="mtgA"
                     /locus_tag="JNZ89_000065"
     CDS             complement(56936..57664)
                     /gene="mtgA"
                     /locus_tag="JNZ89_000065"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HAY8934059.1"
                     /translation="MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAV
                     MVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLAVIAAEDQKFPEHRGFDVASIEKA
                     LAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV
                     YLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSSPSGYVRS
                     RQAWILRQMYQLGGEPFMQQHQLD"
     gene            complement(57661..58314)
                     /gene="elbB"
                     /locus_tag="JNZ89_000066"
     CDS             complement(57661..58314)
                     /gene="elbB"
                     /locus_tag="JNZ89_000066"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709007.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HAY8934060.1"
                     /translation="MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ
                     QVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLS
                     NFATLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTA
                     EVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE"
     gene            complement(58544..60880)
                     /gene="arcB"
                     /locus_tag="JNZ89_000067"
     CDS             complement(58544..60880)
                     /gene="arcB"
                     /locus_tag="JNZ89_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic respiration two-component sensor
                     histidine kinase ArcB"
                     /protein_id="HAY8934061.1"
                     /translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
                     VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
                     SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF
                     LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK
                     VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
                     ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI
                     FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV
                     ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
                     FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV
                     AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK
                     PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD
                     VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI
                     TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS
                     PDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK"
     gene            complement(60976..61905)
                     /locus_tag="JNZ89_000068"
     CDS             complement(60976..61905)
                     /locus_tag="JNZ89_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312117.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HAY8934062.1"
                     /translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
                     CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
                     QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG
                     HDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHI
                     VKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
                     ENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE"
     gene            62580..67040
                     /gene="gltB"
                     /locus_tag="JNZ89_000069"
     CDS             62580..67040
                     /gene="gltB"
                     /locus_tag="JNZ89_000069"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HAY8934063.1"
                     /translation="MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
                     ILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIV
                     EEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIA
                     RRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
                     STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNET
                     GSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWD
                     GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
                     PGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELD
                     DDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
                     QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
                     TMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLP
                     VPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL
                     GRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
                     VGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPD
                     VVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFK
                     RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
                     FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
                     GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
                     SFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARE
                     TRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTEN
                     NPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
                     ADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH
                     EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCIL
                     GKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLNVDDLAIHEEHLRGLITEHVQ
                     HTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
     gene            67053..68471
                     /locus_tag="JNZ89_000070"
     CDS             67053..68471
                     /locus_tag="JNZ89_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY8934064.1"
                     /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEQFSEGQAKAQA
                     DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
                     LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA
                     CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
                     VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENKDADGVYAALPFLIANTKQLMGFGE
                     TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN
                     AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPA
                     DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSD
                     LVVTAIAEGRKAADGIMNWLEV"
     gene            68655..69134
                     /locus_tag="JNZ89_000071"
     CDS             68655..69134
                     /locus_tag="JNZ89_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 domain-containing protein"
                     /protein_id="HAY8934065.1"
                     /translation="MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWE
                     IGRRIVEFEQGGEARAAYGAQLIKRLSKDLSLRYKRGFSAKNLRQMRLFYLFFQHVEI
                     RQTMSGELTPLGIPQTPSAEFPSAKIWQTLSAKLRGCLIFPQLLYCISYFRFVYSCK"
     gene            69151..69456
                     /locus_tag="JNZ89_000072"
     CDS             69151..69456
                     /locus_tag="JNZ89_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8934066.1"
                     /translation="MIYIEQLELIHKSGDVLYPVKITRKSSGKTAFHLVPFGLNKTHD
                     LLEVEDASEAIRLVIDERHSIRCSTLTATITNKKGKRIKRTGIYSIKGVNIKEYNVR"
     gene            complement(69532..69996)
                     /locus_tag="JNZ89_000073"
     CDS             complement(69532..69996)
                     /locus_tag="JNZ89_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
                     /protein_id="HAY8934067.1"
                     /translation="MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN
                     IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ
                     LCSTIDNEQAIILKPGMFAVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA"
     gene            complement(69993..70868)
                     /locus_tag="JNZ89_000074"
     CDS             complement(69993..70868)
                     /locus_tag="JNZ89_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312122.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HAY8934068.1"
                     /translation="MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPQALRDA
                     LAALVAPLQAHAQQVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLSNLPTIA
                     INDAQAAAWAEYQALEGDITDMVFITVSTGVGGGVVSGGKLLTGPGGLAGHIGHTLAD
                     PHGPVCGCGRTGCVEAIASGRGIAAAAQGELMGADARTIFTRAGQGDEQAQQLIHRSA
                     HVLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHD
                     AGLLGAALLAQGEKL"
     gene            complement(70865..71554)
                     /locus_tag="JNZ89_000075"
     CDS             complement(70865..71554)
                     /locus_tag="JNZ89_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HAY8934069.1"
                     /translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ
                     AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII
                     AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
                     ETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQ
                     WYNTAMKKAVL"
     gene            complement(71602..73092)
                     /gene="nanT"
                     /locus_tag="JNZ89_000076"
     CDS             complement(71602..73092)
                     /gene="nanT"
                     /locus_tag="JNZ89_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312124.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid transporter NanT"
                     /protein_id="HAY8934070.1"
                     /translation="MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
                     EVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLAC
                     GFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA
                     AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY
                     RGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPT
                     GVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVSGFL
                     GDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIG
                     GYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLI
                     GLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS"
     gene            complement(73201..74094)
                     /gene="nanA"
                     /locus_tag="JNZ89_000077"
     CDS             complement(73201..74094)
                     /gene="nanA"
                     /locus_tag="JNZ89_000077"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HAY8934071.1"
                     /translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV
                     GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA
                     VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
                     VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
                     GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP
                     VDEKYLPELKALAQQLMQERG"
     gene            complement(74216..75007)
                     /gene="nanR"
                     /locus_tag="JNZ89_000078"
     CDS             complement(74216..75007)
                     /gene="nanR"
                     /locus_tag="JNZ89_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417693.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NanR"
                     /protein_id="HAY8934072.1"
                     /translation="MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMI
                     RRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
                     IIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQ
                     SLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVS
                     YQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK"
     gene            75387..76753
                     /gene="dcuC"
                     /locus_tag="JNZ89_000079"
                     /pseudo
     CDS             75387..76753
                     /gene="dcuC"
                     /locus_tag="JNZ89_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417694.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
     gene            complement(76796..77293)
                     /gene="sspB"
                     /locus_tag="JNZ89_000080"
     CDS             complement(76796..77293)
                     /gene="sspB"
                     /locus_tag="JNZ89_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HAY8934073.1"
                     /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPME
                     YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT
                     MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPA
                     LRVVK"
     gene            complement(77299..77937)
                     /gene="sspA"
                     /locus_tag="JNZ89_000081"
     CDS             complement(77299..77937)
                     /gene="sspA"
                     /locus_tag="JNZ89_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HAY8934074.1"
                     /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
                     NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
                     MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
                     LAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS"
     gene            complement(78332..78724)
                     /gene="rpsI"
                     /locus_tag="JNZ89_000082"
     CDS             complement(78332..78724)
                     /gene="rpsI"
                     /locus_tag="JNZ89_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HAY8934075.1"
                     /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
                     RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG
                     FVTRDARQVERKKVGLRKARRRPQFSKR"
     gene            complement(78740..79168)
                     /gene="rplM"
                     /locus_tag="JNZ89_000083"
     CDS             complement(78740..79168)
                     /gene="rplM"
                     /locus_tag="JNZ89_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HAY8934076.1"
                     /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
                     TPHVDTGDYIIVLNADKVAVTGNKCTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
                     IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
     gene            complement(79386..80513)
                     /locus_tag="JNZ89_000084"
     CDS             complement(79386..80513)
                     /locus_tag="JNZ89_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HAY8934077.1"
                     /translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSRP
                     PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR
                     LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM
                     KALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL
                     TQAHLWLSPLHDETRAQMDKLWLALAGAKRENSPTLEINHRPLATMGAENQTLAVSFT
                     TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS
                     AEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG"
     gene            80707..81105
                     /locus_tag="JNZ89_000085"
     CDS             80707..81105
                     /locus_tag="JNZ89_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1043 family protein"
                     /protein_id="HAY8934078.1"
                     /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
                     LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES
                     EASNDQAPVQMPRDYSEGASGLLRTGAKRD"
     gene            81259..82626
                     /gene="degQ"
                     /locus_tag="JNZ89_000086"
     CDS             81259..82626
                     /gene="degQ"
                     /locus_tag="JNZ89_000086"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegQ"
                     /protein_id="HAY8934079.1"
                     /translation="MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAP
                     MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKG
                     YVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSD
                     KLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGAL
                     LNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM
                     SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIAT
                     TEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDCGKGI
                     KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESI
                     YLLMR"
     gene            82716..83783
                     /gene="degS"
                     /locus_tag="JNZ89_000087"
     CDS             82716..83783
                     /gene="degS"
                     /locus_tag="JNZ89_000087"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HAY8934080.1"
                     /translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP
                     ASYNLAVRRAAPAVVNVYNRGVNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
                     QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN
                     PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
                     SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQSGGI
                     DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV
                     VMRDDKQLTLQVTIQEYPATN"
     gene            complement(83846..84784)
                     /gene="mdh"
                     /locus_tag="JNZ89_000088"
     CDS             complement(83846..84784)
                     /gene="mdh"
                     /locus_tag="JNZ89_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HAY8934081.1"
                     /translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV
                     DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
                     QQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
                     LKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKA
                     GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE
                     ERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK"
     gene            85219..85689
                     /gene="argR"
                     /locus_tag="JNZ89_000089"
     CDS             85219..85689
                     /gene="argR"
                     /locus_tag="JNZ89_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HAY8934082.1"
                     /translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS
                     KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
                     GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL"
     gene            86054..86317
                     /gene="yhcN"
                     /locus_tag="JNZ89_000090"
     CDS             86054..86317
                     /gene="yhcN"
                     /locus_tag="JNZ89_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417705.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HAY8934083.1"
                     /translation="MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSG
                     VASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK"
     gene            complement(86372..86644)
                     /locus_tag="JNZ89_000091"
     CDS             complement(86372..86644)
                     /locus_tag="JNZ89_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934084.1"
                     /translation="MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMN
                     DVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH"
     gene            complement(86736..88703)
                     /gene="aaeB"
                     /locus_tag="JNZ89_000092"
     CDS             complement(86736..88703)
                     /gene="aaeB"
                     /locus_tag="JNZ89_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeB"
                     /protein_id="HAY8934085.1"
                     /translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA
                     IVAAGPAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW
                     AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA
                     IIADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTALQ
                     GMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDT
                     PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE
                     EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS
                     LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE
                     VQQRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR
                     DRTERVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM
                     IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK
                     LRIWQAPPQVTEPVHRLAGMLHKYQHALTDS"
     gene            complement(88709..89641)
                     /gene="aaeA"
                     /locus_tag="JNZ89_000093"
                     /pseudo
     CDS             complement(88709..89641)
                     /gene="aaeA"
                     /locus_tag="JNZ89_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417708.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeA"
     gene            complement(89649..89852)
                     /locus_tag="JNZ89_000094"
     CDS             complement(89649..89852)
                     /locus_tag="JNZ89_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AaeX family protein"
                     /protein_id="HAY8934086.1"
                     /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFV
                     WHPALFNTALYCCLFYLISRLFV"
BASE COUNT        22131 a        24165 c        22361 g        21338 t
ORIGIN      
        1 tgacagcctg gatattaaaa ccacattaca ggcaaacgac attccaggac tcacaaccga
       61 ccaggttgtc tctgttaaca cccgattcac acagataaaa agcagcaccg tatattctgc
      121 tgcaacccaa acgggtgttt gccagggtga cacgtctcgt tatggacccg ttaatattgg
      181 tgcaaatacc acctttaccc tgtatgtcac caagccattt ctcggctcga tgaccattcc
      241 gaaaacggat attgccgtca ttaaaggcgt gtgggtcgat ggaatgggaa gcccgtctac
      301 aggtgacttc catgatttag tcaagttatc gattcaggga aatctcaccg ccccacagtc
      361 gtgcaaaatt aatcagggcg atgttattaa ggttaatttt ggattcatca atggtcagaa
      421 gtttaccacc cgcaatgcca tgccagacgg ttttactcca gtagactttg atatcactta
      481 tgactgtggt gatacttcaa agattaaaaa ctcgttgcaa atgcgcatcg acggtacaac
      541 tggggtagta gaccagtaca acctggtcgc caggcgaaga agttcagaca atgtgcccga
      601 tgtcggtatt cgtattgaaa atctcggcgg cggagttgca aatattcctt ttcagaacgg
      661 tatccttccc gttgatcctt ccgggcatgg caccgtcaat atgcgcgcct ggccagttaa
      721 tctggtcggt ggtgagctgg aaacaggaaa atttcagggc acagccacca ttaccgtcat
      781 ggtgcggtaa aagaagacgt tgcgttttga ttaacgcaac gcttcggcac tgttacccct
      841 gctgctccag cgcatactta tacagcgcat ttttcttcac gccatgaatt tctgcgacca
      901 gcgccgccgc ttttttcagc ggcagttctg cctgtagcag cgccagcgtg cgcagggcat
      961 cggcgggtaa gtcttcttcc tgtgctttat gaccttcgac aatcagcacc atttcgcctt
     1021 tgcgacggtt ttcatcttcc tttacccacg ccagcagttc gccaacgggc gcgccgtgaa
     1081 tggtttccca ggttttggtc agctcacgcg ccagaaccac gtagcgggat tcgcctaata
     1141 ccgcaacgat atcttccagg ctatctaaca gacggtgggt ggattcataa aaaatcagcg
     1201 tgcgcggctc cgcttcaatg gcttttagcg catcacggcg gccttttgat ttggcaggta
     1261 aaaagccttc gtaacagaaa cggtcagagg gtaaacccgc ggcgcttaac gcagtgatag
     1321 cagcacacgg cccgggtagc ggcaccacgc gaatccccgc ttcacggcag gtacgcacca
     1381 gatggtagcc aggatcgtta attagcggcg ttccggcatc ggaaaccagc gcaatgtttt
     1441 gcccctcttg cagcttcgcc agcagcgttt cggctttttg ttgttcgtta tggtcgtgca
     1501 gcgcaaacaa ccgggcatta atcccaaaat gttgcagcaa taaaccggtg tgacgagtat
     1561 cctcggcggc aatcagatca acggcctgta atacctctaa cgcacgctgg gtgatatccg
     1621 ccagattgcc gattggcgtc ggtacaatgt aaagctggcc ctgagaatta tccgccgatt
     1681 ggtgttgttt cattgtgtcg tccgtattgc cgatttaata ttgagcattg cgtaaaaaaa
     1741 tatcactgga tacattatgg taccctcaac attttctcgt ttgaaagccg cgcgttgtct
     1801 gcctgttgtt ctggcagccc tgattttcgc cggttgtggc acccatactc ccgatcagtc
     1861 cactgcttat atgcagggca cagcgcaggc tgattctgcc ttttatcttc agcagatgca
     1921 gcaaagctct gatgatacca ggatcaactg gcaattactc gccattcgtg cactggtgaa
     1981 agaaggtaaa accgggcagg cggttgagtt gtttaaccaa ctaccgcaag aactgaacga
     2041 ttctcagcgt cgcgagaaaa cactgctggc ggtagagatt aaactggcgc agaaagattt
     2101 tgctggcgcg caaaacttgc tggcgaaaat cacacctgcc gatttagaac aaaaccagca
     2161 agcgcgttac tggcaggcaa aaatcgatgc cagccagggg cgtccttcca ttgatttact
     2221 gcgcgcgtta attgctcagg aaccgctgct cggcgcgaaa gaaaaaaagc agaatattga
     2281 tgccacctgg caggcgctct cctccatgac tcaggaacag gcgaatacgc tggtgatcaa
     2341 cgccgacgaa aatattctgc aaggctggct ggatctgcag cgcgtctggt ttgataaccg
     2401 taacgatccc gatatgatga aagccgggat cgccgactgg cagaaacgtt atccgaacaa
     2461 tccgggcgcg aaaatgctgc caacgcagtt ggttaacgta aaagcgttta aaccagcctc
     2521 gaccaacaaa atcgccctgc tgttgccgct gaatggccag gcagcggtat ttggtcgcac
     2581 tattcagcaa ggctttgaag cggcgaaaaa tatcggcact cagccagtgg cggctcaggt
     2641 agctgccgca gacgtagcag aacaacctca gccgcaaact gcggatggcg ttgccagccc
     2701 ggcacaagcc tcggttagcg atctgaccgg tgatcagcct gcggcccagc cggtgcctgt
     2761 aagcgccccg gcgacaagca ccgcagcggt aagcgcaccc gcaaatccat ccgcagagct
     2821 gaaaatctac gatacctcat cacaaccact tagccagatc ttaagccagg ttcagcagga
     2881 tggcgcgagt attgtggttg gtccgttgct gaaaaataac gttgaagagt tgcttaagag
     2941 caacaccccg ctgaacgtgc tggtactgaa ccagccggag aatatcgaaa accgcgtcaa
     3001 tatttgttac ttcgcgcttt caccggaaga cgaagcgcgc gatgcagcgc gtcatattcg
     3061 tgaccagggt aaacaagcgc cgctggtgct gatcccacgc agttcattgg gcgatcgcgt
     3121 agccaatgcg tttgcgcagg agtggcagaa actgggcggc ggcaccgttc tgcaacaaaa
     3181 atttggttcc accagcgaat tacgcgcggg tgttaacggc ggttctggta tcgctttaac
     3241 gggtaccccg attactccca gagcgacaac cgactccggc atgacgacca acaatccaac
     3301 gctgcaaacc acgccaaccg atgaccagtt caccaataat ggcggtcgtg tcgatgcggt
     3361 gtacattgtg gcaacgccgg gtgaaatcgc ttttatcaaa ccgatgatcg ccatgcgtaa
     3421 cggtagccag agcggtgcaa tgctgtacgc cagctcccgc agcgcacaag gcaccgcagg
     3481 cccggatttc cgtctggaga tggaaggttt gcagtacagc gaaatcccga tgctggcggg
     3541 cggtaatctg ccgttaatgc agcaggcact cagcgcggtg aataacgatt attcactggc
     3601 tcgcatgtat gcgatgggcg tcgatgcctg gtcgctggca aatcatttct cacaaatgcg
     3661 ccaggttcag ggttttgaaa tcaacggtaa taccggaagc ctgacggcaa acccggattg
     3721 cgtgattaac aggaagttat catggctaca gtaccaacaa ggtcaggtag tccccgccag
     3781 ttaaccacca aacagaccgg cgatgcgtgg gaagtacaag cgcgtcgctg gctggaaggc
     3841 aaaggactgc gatttgtcgc cgctaacgtg aacgagcgtg gcggtgagat cgatctgata
     3901 atgcgtgaag gctggaccac cgtttttgtc gaggtgcgtt accgccgctc tgcgctttat
     3961 ggcggcgcgg cagccagtgt gacccgcagc aaacaacaca aattattaca gactgcccgc
     4021 ttgtggctcg cgcgtcataa tgggagtttt gatactgtgg attgccggtt cgatgtggta
     4081 gccttcaccg ggaatgaggt tgagtggatt aaggatgcct ttaatgacca ctcataatta
     4141 aggtttaagg attagcgtgc aagaaagaat taaagcttgc ttcactgaaa gcattcaaac
     4201 tcaaattgcg gcggcagagg cgcttccgga tgccatctcc cgtgcagcca tgacgctggt
     4261 tcagtctctg ctcaatggca acaaaatcct ctgttgtggt aatggaactt ccgctgccaa
     4321 tgcacagcat tttgctgcca gcatgatcaa ccgtttcgaa acggagcggc ccagcttacc
     4381 tgccattgca ctaaatactg ataatgttgt cttaacggcg attgccaacg atcgcttaca
     4441 tgatgaagtg tatgcaaaac aggtgcgggc gctgggtcat gcgggagatg tattgttagc
     4501 catttccacc cgtggcaaca gccgcgatat tgttaaagca gttgaagccg ccgttacgcg
     4561 tgatatgacc attgtggcat tgaccggcta tgacggcggc gaacttgcag gtttgttagg
     4621 gccacaggat gtggagatcc gcattccttc gcatcgtagt gctcgcattc aggaaatgca
     4681 tatgctgacg gtaaattgcc tgtgcgatct gatcgataac acgcttttcc ctcaccagga
     4741 tgattaagga gaatacatga aggcattatc gccaatcgca gtccttattt ccgcgctgct
     4801 gttgcaaggt tgtgttgccg ctgccgtagt gggtaccgct gctgtgggta ccaaagccgc
     4861 aactgaccca cgcagtgtcg gtacccaggt ggacgatggt accctggaag tgcgcgtgaa
     4921 cagcgcattg tcgaaagacg aacagattaa gaaagaaacc cgtattaatg tcacggcgta
     4981 tcagggcaaa gtgctgctgg ttgggcagtc accaaatgct gaactttcgg ctcgcgccaa
     5041 acagattgct atgggcgtag acggtgccaa cgaagtgtat aacgagattc gtcagggcca
     5101 gccgattggt ctgggcgaag catctaacga tacgtggatc accaccaaag tgcgttcgca
     5161 gctcttaacc agcgacctgg tgaaatcgtc caacgtgaaa gtgaccaccg aaaacggtga
     5221 agtgttcctg atggggctgg tgactgaacg tgaagcgaaa gcggcggcag atattgccag
     5281 ccgggtgagc ggcgtaaagc gggtaaccac agcgtttacg tttattaaat agcagcccct
     5341 tgtaatgcct gatgcgacgc ttgccgcgtc ttatcaggcc tacaacgatg caaaccgtag
     5401 gtcggataag gcgtttacgc cgcatccgac atgttttccc tcaaatcaga acaacagcgc
     5461 cagcccggcc accagacaaa tcgccgcaaa accccagccg aggacaaacc ccataaacac
     5521 cagcgtcgcc gggtttaaca ccggattgcc catccagaat gccagcgcac cgcccatcga
     5581 tacctgttgg cgacgcatcc ccgccgcgac cggagccgca cagcaggtac acatcatgcc
     5641 cggcagcgaa aacagcgttc ccagcagcgt gccgcgaaag cgcgattgcc caagcgtacg
     5701 caacaaccag tcacgcggga tcagcacctg aatcaacgaa ccgaggatca cccccagcac
     5761 cgccgctttc catactgcga ggaaatagat catcgcgtaa tccaacgccg cttgccacgg
     5821 attagcatcc gcctgcgcaa ggatagattt accgatactg tgggtttcgg ctgcagtaaa
     5881 cgctttgccg tagtaatgtt gccatttcac ataccagaga ccggcaatga caacgagaaa
     5941 gaaaagcgcg ggtttccacc actgaatggg tgttgccgcc tgagatgaag actgaccagt
     6001 catagcattc cctaggaata agttatgata attgagcgcg tgaatattac gctcactatc
     6061 aattcttggg aataattatt cagctctttt gcgtaattct gaagagctta aaatcgtcac
     6121 gccttcatgc tcaggccgca tcgcctctgc cagcatgacc cgcgccacgt ctctcgcatc
     6181 aatggatttc cagttacctg gtaacaaacg gaacagcggc gcaaaaagcg tttcgttcat
     6241 ccgctgtttg ctacgatcgc ccagtaacat cgacgggcga gcaatggtca atttcggcca
     6301 gttctgggca attaatgctt cttccatctc ccctttgacg cggttataga aaaacggcga
     6361 gtgggcattg gcccccatag cactgaccac cagcatatgc tgcgcgccca gccgccgccc
     6421 ggttaatgcg gtatccacta ccagcgtgta atcggcatga ataaacgcct ctttgctccc
     6481 cgcttctcgc cgcgtggtgc cgagacaaca aaacacaatg tcgatgggtt cggtgacctg
     6541 cgccaacgcg tcactcagtt gcggatcatg gggattaaac accccgggca tatcgcccaa
     6601 cggacgtcgc gtcggcgcag caatggcgtt aactttcggt tcattaatca acatccgcag
     6661 caggtgaccg cccaccagcc ccgttgcgcc tgtaatcagt acctgactca tcttcgctcc
     6721 tttacagaat tgtctgcctt gcgctccacg gctcatgcac cagtcttaat agaccatgag
     6781 gtaattatcc ccgattgtgg gaaattcgcc tcatccaatg caacaacgcg gaggaagcat
     6841 gagtaagaaa attgccgttt taatcagtga tgaatttgag gattcagaat ttacttcacc
     6901 cgcagacgag ttccgtaaag ccggacacga agtaattacc attgaaaagc aagcgggtaa
     6961 aacggtgaaa ggcaaaaaag gagaagccag cgtgaccatc gataaatcca tcgatgaagt
     7021 gacgccagcg gagtttgatg ccctgctgct accgggcggc cattcaccgg attatctgcg
     7081 tggggacaac cgttttgtca cctttacccg tgattttgtg aatagcggca aacctgtttt
     7141 cgccatctgt cacggtccgc agctgctgat cagcgccgat gtgattcggg ggcgcaaact
     7201 gaccgcagtt aaaccgatca ttattgatgt taaaaatgcg ggcgcggaat tttacgatca
     7261 ggaagtcgtg gttgataaag atcagctggt taccagccgg acaccggacg atctgccagc
     7321 gtttaaccgc gaggcgttac gcctgctcgg tgcctgagtc gcgtagccaa atcatttttt
     7381 taccaaagcc cagcgtgttg tcggtgaatt tgatttcatc gagccggatt tcccacaccg
     7441 gggccgacag cattctggca accggaaagc gatgattgta cgccttgcgc gcgaggtcgc
     7501 tttcctcacc ttccagcctg cggatctcac ctttaaactg cacaccgcga attaacgcta
     7561 ccgttttcgg ctgaccgttt accgttccgg caaccgcagc ctgcggccca ctcatctgcg
     7621 cgtggcgcgt tttttcttcc gtcaaaatgt agaaggcgac tttctgcgca tcaaacagat
     7681 aaaaagcatt agcgcaccac agttcccctt cctgctgcac acaccaggtg acaacatgtt
     7741 gttttgccaa ccaacggctg atggtgatga gtgtttccat tgctgttctc ttttatactg
     7801 tgggcctgac cttaacatgc gacgcagacg atgacaccct ggtttcttta cttgatccgt
     7861 accgccgaca ataagcttta taccgggatc accacggatg tcgaacgccg ctatcagcag
     7921 caccaaagcg gcaaaggggc gaaagcactg cgcgggaaag gagaactgac gctggcgttt
     7981 tctgcgccag tgggcgaccg ttcgctggca ctacgggcgg aatatcgcgt taagcaactg
     8041 accaaacggc aaaaagagcg tctggtagcg gaaggcgcag ggtttgcaga actgttgagc
     8101 agcctgcaaa ccccggagat taaaagcgat tgaaatgctc gtgatactca accagaccgg
     8161 ttacgccatt cagcgcgtca tccgctaaac gatgtacctg gaaggcgctt tcagtgcccg
     8221 gccagcggca acgcagatcg tgatgcgccg ccagttcaaa gccgaaacga ctgtacagcg
     8281 ccggatcgcc cagcgtcacc actgcggcat agccgaactc attaagcgaa tcgagtcctt
     8341 catagaccag ttggcgtgcc agcccctgtc cacggtattt ttcatcaacc gccaacggtg
     8401 ccatgccgac ccattgcagg tcttcgccct gcacatcaac cggactaaat gccacatagc
     8461 caatgacctg accttcgtca tctgtcgcca ccagccccag cgtcagaaag ccatcttcac
     8521 gcagatcgtg aaccagcttc gcttccgcat cactttcgaa tgagcgacgc agcagggcat
     8581 caatacccgg cgcatcaatg ggaatttcta ctcgaattag catggttcac ctaccgatgt
     8641 ctgtttggtt tcaggcgcgg ttttcattcc cgcctcaaca aaatccgcca gttgcagcag
     8701 catcatgcgt aaggctttcg gcatttgctc cagttcaatg gcgtccatca ggtttttcac
     8761 atgcagcccc agctccgtat cgccttcaat caccagccga cgctggaaga agagcgtatc
     8821 tggatcttgt ttacgcgccg caatcatcag cagatcgctg acgtcggcac taaaactcac
     8881 atcagcttgc gcgttctggc tgaccaccag tttgccattc accaccgagg taaaccattg
     8941 caggtcaata tcacgcacat gaatacttaa ccagcggcct tcaagaaact ccagctcgcc
     9001 atcatccagc gcctgacgga attgccagct taagacctgc tcaagaacct ggcgttttag
     9061 cgcaaatggc gtcagtttta ccggtacact caacagagat ggccccaaat gcacaatacg
     9121 ggaacgaagt ttatccaaca cgagttttac tccctgtttc aacaatcatc ctattttgcc
     9181 atatcagaaa aataacatag cggtataaat caacaattcc atatgaaatt gctgctacca
     9241 ccaatacaac tttaactgcc ttaaatcaaa aattgtcgca gcaaggttaa ctaaaatccc
     9301 agttcgttaa catttttgcg ttttgatagc gcaaccttca ggaaaaatta tggagctgct
     9361 ctgccctgcc ggaaatctcc cggcgcttaa ggcggccatc gaaaacggcg cagatgctgt
     9421 ttatatcggg ctaaaagatg ataccaatgc ccgtcacttc gccggcctta actttaccga
     9481 gaaaaaattg caggaagcgg tgagttttgt ccatcaacat cgccgcaaac ttcacatcgc
     9541 gattaacact tttgcgcatc cggacggtta cgcccgttgg cagcgcgccg tggatatggc
     9601 ggcgcagctg ggtgccgacg cgctgatcct cgccgacctc gccatgctgg aatacgccgc
     9661 cgagcgttat ccgaatattg agcgccacgt atcggtgcag gcttcggcga ccaatgaaga
     9721 ggcgattaac ttttatcatc gccattttga cgttgcccgc gtggtgctgc cgcgcgtgtt
     9781 gtcgattcat caggtgaaac agctggcacg ggtcacacct gtaccactgg aagtgtttgc
     9841 tttcggcagc ctgtgcatta tgtcggaagg ccgttgctat ctgtcgtcgt atctgacggg
     9901 tgagtcgcct aacaccgtgg gcgcgtgttc tccggcccgt ttcgtgcgct ggcaacaaac
     9961 gccgcagggg ctggaatccc gcctgaacga agtgctgatc gaccgttatc aggacggcga
    10021 aaacgcaggt tatccgacgc tgtgtaaagg gcgttatctg gtggacggcg agcgctatca
    10081 cgcgctggaa gaaccaacca gtctcaatac cttggaactg ctgccggagt taatggcggc
    10141 gaatattgct tcggtgaaaa ttgaaggccg ccagcgtagc ccggcgtatg tcagccaggt
    10201 ggcgaaagtc tggcgtcagg ctatcgaccg ttgtaaggcc gatccgcaaa gcgcgtggat
    10261 ggagacgctc gggtcgatgt ccgaaggcac gcagaccacc cttggcgcgt atcaccgtaa
    10321 atggcagtga gaagagcaat gaaatattcc ttagggccag tgctgtggta ctggccaaaa
    10381 gagacgctgg aagattttta tcagcaggcc gccaccagca gcgccgacgt gatttatctt
    10441 ggagaagcgg tatgcagcaa gcgccgggca accaaagttg gcgactggct ggagatggca
    10501 aaatcgctcg ccggaagtgg caagcagatt gtgctctcca cgctggcgct ggtgcaggca
    10561 tcctctgaac tgggcgaact gaaacgctat gttgagaacg gtgagtttct gattgaagcc
    10621 agcgatctcg gcgtggtgaa tatgtgcgct gaacgcaaac tgccgttcgt cgccgggcac
    10681 gcgctgaact gctacaacgc ggtgacgctg aaaatattgc tcaaacaggg catgatgcgc
    10741 tggtgtatgc cggtggagct ttcccgcgac tggctggtga atctgcttaa tcagtgcgat
    10801 gagctgggca ttcgcaacca gtttgaagtg gaagtcctga gctacggtca tctaccgctg
    10861 gcctactccg ctcgctgctt taccgcgcgt tcggaagacc gcccgaaaga tgagtgtgaa
    10921 acctgctgca ttaagtatcc gaacgggcgc aacgtgctgt cgcaggaaaa ccaacaagtg
    10981 tttgtactca atggcattca gaccatgagc ggctacgttt acaacctcgg taacgagctg
    11041 acatccatgc agggattggt tgatgtggtc cgcctgtcac cgcagggtac tgacactttc
    11101 gcgatgctcg acgccttccg cgctaatgaa aatggcgctg cgccactatt gttgacggca
    11161 aacagcgact gtaacggcta ctggcggcgg ctggcaggac tggagctgca agcctaagta
    11221 aatatgctcg tcatacttca agttgcatgt gctgcatctg cattcgttca ccccagtcac
    11281 ttacttatgt aagctcctgg ggattcactc tcttgtcgcc ttcctgcaac tcgaattatt
    11341 tagagcacag ctcactttgt taacaacttt aactactctt taatgcagta ttaaagatta
    11401 atcggtaaca aagtgagctg ttatgactga taaaaccatt gcgttttcgt tactcgatct
    11461 ggcccccatt cccgaaggtt cttcagcgcg agaagcattc tcccactctc tcgatctcgc
    11521 ccgtctggct gaaaagcgcg gctatcatcg ctactggctg gcagaacacc acaatatgac
    11581 tggcattgcc agtgctgcca cgtcggtatt gattggctat ctggcggcga ataccaccac
    11641 gctgcatctg gggtctggcg gcgtgatgtt gcctaaccac tcaccgttgg tcattgccga
    11701 acagttcggc acgctcaata cactctatcc ggggcgaatc gatttggggc tgggtcgtgc
    11761 gccaggtagt gaccaacgga caatgatggc gctgcgtcgc catatgagcg gcgatattga
    11821 taatttcccc cgcgatgtcg cggagctggt ggactggttt gacgcccgcg atcccaatcc
    11881 gcatgtgcgc ccggtaccag gctatggcga gaaaatcccc gtgtggttgt taggctccag
    11941 cctttacagc gcgcaactgg cggcgcagct tggtctgccg ttcgcgtttg cctcacactt
    12001 cgcgccggat atgttgttcc aggcgctgca tctttatcgc agcaacttca aaccgtcggc
    12061 acgactggaa aaaccatacg cgatggtgtg catcaatatt atcgccgccg acagcaaccg
    12121 cgatgccgaa ttcctgttta cctcaatgca gcaagccttt gtgaagctgc gccgcggcga
    12181 aaccgggcaa ctgccgccac cgattcaaaa tatggatcag ttctggtcgc cgtccgaaca
    12241 gtatggtgtg cagcaggcgc tgagtatgtc gttggtaggt gataaagcga aagtgcgtca
    12301 tggcttgcag tcgatcctgc gcgaaaccga cgccgatgag attatggtca acgggcagat
    12361 tttcgaccac caggcgcggc tgcattcgtt tgagctggcg atggatgtta aggaagagtt
    12421 gttgggatag tgtgtcttaa cgcgggaagc cttatccgag ctggcaacgc tgtcctacgt
    12481 agacctgata agcgaagcgc atcaggcatt gtgtaggcag cagaaatgtc ggataaggca
    12541 ccgctgatta ctgatacacc ggcagtaaat taaagctcga taaaatatgt accaatgcgt
    12601 tgccgacgcc aaacaccaga atcagcgtaa tcatcggctt gccgccccag acgcggaatt
    12661 tcgggctgcc aaagcgttta cgcgatgcgc gggccagcag tgccggaaca attgccgccc
    12721 agatggtagc cgctaaacca gcataaccaa tggcgtacag gaatccattc gggaacagca
    12781 gaccacccac aacaggcggt gcaaaggtca acaatgctgt tttcaagcgg cccatagccg
    12841 agtcatcgaa accaaacaga tctgccagat agtcaaacaa acccagcgtt acgccaagga
    12901 acgaactcgc taccgcaaag tttgagaaca cgaccagcag aaggtccagg ctacggctgt
    12961 tcagcacgcc gcttaatgcc tgtaccagca catcaatatt accgcccttc tctgcaatac
    13021 cgataaactc cggacgcggg atgttaccca tcgtcgccag caaccagatg gtatacagcg
    13081 ccagtgccat cagcgtaccg tacaccaggc atttcacgat ggttttcgga tctttgccgt
    13141 aatacttcat caggcttggc acgttaccgt gataaccaaa cgacgccagg cagaacggca
    13201 atgtcatcag cagatacggc gcataagatg cattgctttc tgcaacgttg aacaatgtcg
    13261 caggctgcac atgccccaac aggctgccaa aggtgaggaa gaaggtaatg actttcgccc
    13321 ccagcacaat cgccgtcatg cggctgacgg ccttagtact caaccacacc acaaacgcta
    13381 ccagcagtgc aaaaccaaaa cccgccgccc gtgccgggac gtttagcgac atctctgcga
    13441 aggtgtgatg cagaattgaa ccactggcag aaatataggc ataggtcagg atatagagca
    13501 caaaggcaat ggaaataccg ttgaccacgt tccagccttt gcccagcaaa tctttggtga
    13561 tggtgtcaaa actcgaaccg attcggtaat tcaggttagc ttccagaatc atcaagccgg
    13621 aatgcagcat acagaaccag gtaaagatca gcgccgccat tgaccagaaa aaccacgccc
    13681 cggacatgac cactggcaga gaaaacatcc ctgcgccaat aatggtgccg ccgataatca
    13741 ccacgccgcc aagcagcgac ggtgacgttt gggtggtggt tagtgttgcc atgagggctt
    13801 ctctccagtg aaaaatagtg cgactgcgtt gttatgcatt gcactgtacc agtacgcgag
    13861 tacaaaagac agaaaaaaag ccccgatggt aaaaatcggg gctgtatata ttattttaca
    13921 gattgtgttc gctgttcagc gatgattacg catcaccacc gaaacgacga cgaccggtag
    13981 agtcatcacg acgcggagcg cggccttcac gacgttcgcc gctaaaacga cgaccatcac
    14041 cacggccacc ttcacggcgt tcaccgctga agttacgacc gccttcacga cgttcgccac
    14101 cgaaaccacg accaccgcca cgacgctcac cgccagtatg cggctgtgca tcgcccagta
    14161 actgcatgtt catcggcttg ttgagaatgc gagtgcgcgt aaagtgttgc agcacttcac
    14221 ccggcatacc tttcggcagt tcgatggtgg agtgagaagc aaacagcttg atgttaccaa
    14281 tgtaacggct gctgatgtcg ccttcgttag caatcgcacc aacgatatga cgaacttcaa
    14341 caccatcatc acggcccact tcaatgcggt acagctgcat atcgccaaca tcacgacgtt
    14401 cacgacgcgg acgatcttca cggtcaccac gcgggccacg gtcgttacga tcgcgcggac
    14461 cacggtcatc acggtcacgg aattcacgtt tcggacgcat cggcgcatct ggcggtacga
    14521 tcagagtacg ttcaccctgt gccattttca gcagtgccgc agccagagtt tcgagatcca
    14581 gctcttcacc ttctgcagtc ggctgaattt tgctcagcag tgcgcggtat tgatccagat
    14641 cgctgctttc cagctgctgc tgtactttag cggcgaattt ttccagacgg cgtttgccca
    14701 gcagttctgc gttcggcagt tctacttccg gaatagtcag cttcatagta cgttcaatgt
    14761 tgcgcagcag acgacgctcg cggttctcaa cgaacagcag cgcgcggcca gcacgacccg
    14821 cacgaccggt acgaccgata cggtgaacgt aagactcaga atccatcggg atatcgtagt
    14881 taactaccag gctgatacgc tcaacgtcca ggccacgggc tgcaacgtcg gtcgcaatca
    14941 ggatgtccag acgaccatct ttcaggcgtt ccagtgtctg ttcacgcagc gcctggttca
    15001 tgtcaccgtt cagcgcggcg ctgttgtagc cgttacgctc aagagcttca gccacttcca
    15061 gagtcgcgtt tttggtacga acgaagataa tcgccgcatc aaaatcttcc gcttccagga
    15121 aacgtaccag tgcttcgttt ttgcgcatac cccagacagt ccagtagctc tggctgatgt
    15181 caggacgggt agtcacgctg gactgaatgc gcacttcctg cggctctttc ataaagcggc
    15241 gggtaatgcg acgaatcgct tccggcatgg ttgcagagaa cagagcggtc tgatgacctt
    15301 ccgggatctg cgccataatg gtttcaacgt cttcgatgaa gcccatgcgc agcatttcgt
    15361 cagcttcatc cagaaccaga ccgctcagtt tagagaggtc cagagtgcca cgtttcaggt
    15421 ggtccagcag acggcccgga gtaccgacaa cgatctgcgg cccctgacgc agggcgcgta
    15481 attgcacgtc ataacgctgg ccgccgtaca gagcaaccac atttacgccg cgcatgtgtt
    15541 tagagaaatc cgtcattgct tcagcaacct gtaccgccag ttcgcgggtc ggtgccagca
    15601 ccagaatctg tggtgctttc agctcaggat caagattctg caacagaggt aaagagaatg
    15661 ctgcagtttt tccgctcccc gtctgggcca tacccagaac gtcgcggcca ttcagcagat
    15721 gtggaataca ctctgcctga attggagatg gtttttcgta acccagatcg ttaagggctt
    15781 caaggatagg agccttcagg cccagatctg caaaagtggt ttcgaattca gccatgtagt
    15841 acgtgtgcct caaaattaat ggcggccagt ctacataact catcatgaaa ttgatcagca
    15901 attttcattg aaaagtgtga accggctcaa agtaggtgta ttaacgaaca acaacgccct
    15961 caccccttaa ggtgatggca atcaaaaaag attacgggct gatgtgtacg tcagctattg
    16021 ctggtccgat tctgccaggt catcttggtc ctggcccagg agcgataatt ccaacaatgc
    16081 gtatcggtgc tcaacaaagt tatgaacgtt gttggcaacc gccagtttga acagtgccgt
    16141 ggcgctgtcc gaatccccca gacttaggta gtacttacct aaatagaagt tggtttcact
    16201 gagatgctca gcgagcgagg tgttatccgt tgcgtccgcc ttgagccttt ccattaacgt
    16261 ttgttcgcta atgttgccca ggtagaactc gacaatgttc catccccact gttccttatc
    16321 cgatttttcg aagtgctgtt tcaacacttc tttagcctgc ttctcatcga gcttctgctc
    16381 ggcgagataa agccacagac tacggaaagg atcattggga tcgtcttgat aaaacgccag
    16441 cagatcatct tgcgctaact tgtcacgacc gccgtaatat aatgcgatcc cgcgattcaa
    16501 gtgcgcgtag ttgtaagttg gatcaagctc aagtacagaa tcaaacgctt cataggcagc
    16561 atcaaaattg cctgcctgcg ttaaatatat gcctaagtaa ttgaacactt caggcatatc
    16621 cggtcggatt gccagcgctt gcgaaaaatc gttacgcgct aatgccctca gaccgagact
    16681 atcatacaac actccgcgct catataaaag ctgtgcgcgt tcgtcatcgg ttaaagcccg
    16741 actggcaagg atttgttcca tacgtgccag aatcacttcc tgctgtaaag tcggttgcaa
    16801 tggtaccgcg aggacttcac ttttacgcca ggaagtatta ctgcatcctg caagcgtaag
    16861 tgctgtcgca acgaaacacc agcgcaaaaa aggcttcatt tcccactccc gaagaccacg
    16921 gttgaatgaa cgtcctgttc ccggttgcta acaaggcgtc ctgcccggtt aaaagccccc
    16981 cgccgcagcg gagggcaaat ggcaacctta ctcgccctgt tcagcagccg gagcttccgg
    17041 tgctgcagca ggttgagact gctcagtcgc ttctttaatg ctcagacgga tacggccctg
    17101 gcgatcaact tccagaactt tcaccggtac ttcctgaccc atctgcaggt aatcggtcac
    17161 tttctcaacg cgtttgtcag cgatttgaga gatgtggacc agaccttctt taccgccgcc
    17221 gatggcaaca aatgcgccaa agtcaacgat acgggtcact ttaccagtgt agacgcggcc
    17281 cacttcgatt tctgcagtga tctcttcgat acgacgaata gcatgtttcg ctttctcgcc
    17341 gtcggtcgct gcgatcttca cagtaccgtc atcttcgatt tcgatggtag tgccagtttc
    17401 ttcggtcagg gcacggataa cagagccgcc tttaccgata acgtctttga tcttgtccgg
    17461 gttgatcttg atggtatgga tacgcggtgc gaactcacag atatcgccac gcggcgcgtt
    17521 gatcgcctgt tccattacgc ccaggatatg cagacgcgca cctttagcct ggttcagcgc
    17581 aacctgcatg atctctttgg tgataccttc aattttgata tccatctgca atgcagagat
    17641 accctcgcgg gaacccgcaa ctttgaagtc catatcgccc aggtgatctt cgtcgcccaa
    17701 aatgtcagac agtacaacgt agttgtcgcc ttctttcacc agacccattg cgatacccgc
    17761 aacggcagct ttgatcggca cacctgcgtc catcagcgcc agagacgcgc cgcacacgga
    17821 agccatagaa gaggaaccgt tggattcagt gatttcagac acaacacgta cggtgtacgg
    17881 gaatttgtcc atatccggca tgactgccag cacgctgcgc ttcgccagac gaccgtgacc
    17941 aatttcacga cgcttcggag aaccgaccat gccggtttcg cctacggagt acggagggaa
    18001 gttgtagtgg aacaggaagg tatcggtacg ttcgcccatc agttcatcaa gaacctgcgc
    18061 gtcacgagca gtacccagcg ttgcggtaac cagcgcctgc gtttcaccac gggtgaacag
    18121 cgcagaaccg tgagtacgcg gcagcacgcc agtacgcaca tccagaccac ggatcatatc
    18181 tttttcacga ccgtcgatac gcggttcgcc tgccagtacg cggctacgaa caacgttttt
    18241 ctcgatagcg tgcagaattt cacccagttc gttttcgtcc agggtttcgt cttcagcaag
    18301 cagcgtcgcg atggtttcag atttgatgac atcaacctgc gcataacgct cttgtttgtc
    18361 ggtgatgcgg taagcatcgc tcaggcgagc ttcagccagt gcagcaacgc gcgcgttcag
    18421 cgcttcgttt accggctccg gctgccagtc ccaacgtggt ttaccggctt ctttcaccag
    18481 ttcattgatg ttctgaataa caacctgctg ttgttcatga ccgaacacta ctgcgcccag
    18541 catctggtct tcgctcagca gttcagcttc agattcaacc atcagaacag cggcttcagt
    18601 accggcaaca accagatcca gtttgctctc tttcagctcg tcctgagtcg ggttcagtac
    18661 gtactggtca ttgatgtaac ctacgcgagc agcaccaatc ggaccattga acggaatacc
    18721 agacagagac agtgctgcgg aagcaccaat catcgcgacg atatccgggt taacttgcgg
    18781 gttaacagaa accacggtgg cgataacctg aacttcgttg acgaagcctt ccgggaacag
    18841 cgggcgaatc gggcggtcaa tcagacgcgc gatcagggtt tcgccttcgc ttggacgacc
    18901 ttcacgacgg aagaagctac ccgggatacg accagcagcg taggtacgct cctgatagtt
    18961 aacggtcagt gggaagaagt cctgacctgg tttggctttt ttctggccaa caacggtaac
    19021 aaataccgcg gtgtcatcca tgctaaccat aacagcggca gtagcctgac gagccatcat
    19081 gccggtttcc agagtcacgg tgtgttggcc gtactggaat ttacgaacga tcggattaag
    19141 caatgtaata tcctttctct ttcttagaca gtaccttacg gcactggtgt taatacccga
    19201 tcttctgcgc atcctcgcga ctaatgacaa ccctaaccca gctctatgtg ggtaaagcct
    19261 ctcattagcc gcgcgaacct ctgcaacgga agatcattca tagcaacaat acattagttt
    19321 ccagtgaatt gctgccgtca gcttgaaaaa aggggccact caggccccct tttctgaaac
    19381 tcggcaggaa ttagcgacgc agacccaggc gctcgatgag ctgggtgtaa cgtgctacgt
    19441 ctttacgttt caggtagtcg agcagtttac gacgctgaga aaccatgcgc agcagaccac
    19501 gacggctgtg gtgatctttt ttgtgctctg caaagtggcc ctgcaggtgg ttgatctgtg
    19561 cagtcagcag tgctacctga acttcggtag aaccggtgtc gtttgcgtca cgaccaaact
    19621 cagaaacgat tttagctgtt gcttcagtac ttagagacat tttaaaactc caaagtatat
    19681 agaatgaaag gacgccgatc tctaattcag cgatcccagt gtacgttacg caaagtgtta
    19741 aacaatttac gcgacgttaa gcggcagtat tctactcgta gcgacttgtt atcgcaagac
    19801 ggttaacatt acgccgggta ttcaaccacc aggcgacgag gcgcgacgcg gccttcatcg
    19861 tcaatttcgc ccataccgat aaacttgccg ttctcacctt ctgtaacgcg aaccagtcct
    19921 tccagcggcg caccggatgt acgaactggg ttaccatttt tgaagtaaac agaagacgtt
    19981 aacggaagat tcaccaccgg gtagtccgaa gctggactgt ccattggcat cagtaatgga
    20041 tcaagtaact ccgcagccgg aatatcctgc tgttcggctt gttcgaccag ttcacgcaga
    20101 tgttccaggg tcaccatccg ttcaaccgga tatttactta ccgccagacg acgcaggtaa
    20161 ataacatgcg cgccacaacc gagtttttca cccaggtcat caatgatggt gcggatataa
    20221 gtgccttttg agcagtgaat ttccagctcc agctcattgc cttcgtggcg aataaacagc
    20281 aattcataaa tggtaatcgg gcgcgcttca cgcggtactt caatgccctg acgcgcatat
    20341 tcgtacagtt ttttaccctg atatttcagt gctgaataca tcgaagggat ctgttcgata
    20401 tcgccacgga aagtatccag cgccgccgcc agttgctctg cgctaaaggt taccggacgt
    20461 tcttcaacga tttgtccgtc ggcatcagaa gtatcggtac gctgtccaag acgcgcaatg
    20521 acccgatagc gtttgtcgga gtccagcaga tactgggaaa acttcgtcgc ttccccgaag
    20581 caaattggca acatgccagt tgccagcggg tccagcgcac cggtatgccc ggcacggttg
    20641 gcgttataaa tccgtttcac tttttgcagc gcatcattgc tggacatacc ctgcggttta
    20701 tccagcaaca aaacgccgtt aatgtcgcga ccgcgacgac gaggacgact cattagtcct
    20761 ccttgctgtc gtccgggtta acacgacgtt cttcgtcatg tttgaccacg ctggtcacca
    20821 ggtttgacat gcgcatccct tcaaccagag agttgtcgta gaagaaggtc agttccggca
    20881 cgatacgcag gcgcatcgct ttccccagca ggctgcggat gaaaccagaa gcttcttgca
    20941 acgctttgat gcccgcttta accgcgtctt catctttgtc gttgaggaac gtcacatata
    21001 ctttggcata cgccaggtcg cgagacattt cgacaccgga aacggtggtc atcatgccca
    21061 ggcgaggatc tttaatttca cgctgcagga tgagagcgat ctctttttgc atttcctgcg
    21121 ctacgcgctg cgggcgacca aattctttcg ccataataaa ttctcctgac aaaaaaggga
    21181 ctgttagccc ctttttaaaa ttaatttcag gtggaagggc tgttcacgtt ggcctgataa
    21241 gacgcgccag cgtcacatca ggcaatccat gccggatgcg gcgtaaacgc cttatcccgc
    21301 atggaaccct aaaaacctta agcgatggta cgttggatct cgatgatttc gaatacttcg
    21361 atcacatcgc cagtgcggac gtcgttgtag ttcttaacgc cgataccaca ttccataccg
    21421 ttacggactt cgttaacgtc atctttgaag cggcgcaggg actccagctc gccttcgtag
    21481 ataaccacgt tgtcacgcag aacgcggatc gggttgtgac gtttaaccac accttcggta
    21541 accatacagc ctgcgatggc accaaatttc ggcgatttga acacgtcacg aacttccgcc
    21601 agaccgataa tctgctgttt cagttccgga gacagcatac cgctcatcgc cgctttcact
    21661 tcgtcaatca ggttatagat gacggagtag taacgcagat ctaggctttc cgcttcaatc
    21721 actttacgtg cagaggcatc agcacgtacg ttgaagccaa ccaggatggc gttggacgcc
    21781 gcagccaggg tggcgtcggt ttcggtgata ccacctacgc cagaaccgat gatcttcact
    21841 ttaacttcgt cagtagacag tttcagcaag gagtcggaga tcgcttccac agaaccctgt
    21901 acgtctgcct tcaggacgat gttcacttcg tgaacttcgc cttcggtcat gttggcgaac
    21961 atgttctcga gtttagattt ctgctgacgc gccagtttaa cttcgcggaa tttaccctga
    22021 cgatacagtg caacttcacg cgctttcttc tcgtcacgta caacggtaac ttcatcaccc
    22081 gcagccggta cgccggacag gccgaggatt tccaccggaa tggacggacc cgcttccagc
    22141 acttcctgac ccagttcgtt acgcatcgca cgaacacgac cgtattcgaa gccacacaga
    22201 acgatatcgc ccttgtgcag agtaccttca cgtaccagaa cggtagcaac cggaccacga
    22261 cctttatcga ggaaggattc gataaccgca ccgctcgcca tacctttacg taccgctttc
    22321 agctccagaa cttccgcctg cagcaggata gcgtccagca gttcatcgat gccggtaccc
    22381 gctttcgcag atacgtgtac gaactggctt tcaccgcccc actcttctgg caggatgcca
    22441 tactgggaga gttcgttctt aacacgatcc ggatcggctt ctggtttatc aatcttgttc
    22501 actgcaacca ccaccggtac ctgcgccgct ttcgcgtgct ggattgcttc gatggtctgc
    22561 ggcatcacgc cgtcgtcggc agcaacaacc aggactacga tgtccgttgc ctgcgcacca
    22621 cgagcacgca ttgaagtaaa cgcggcgtgc cctggggtgt ccaggaaggt gatcatgccg
    22681 ttttcagttt caacgtggta tgcaccaatg tgctgggtaa tgccgcccgc ttcgccagag
    22741 gccactttcg ttgaacgaat gtagtccagc agagaggttt taccgtggtc aacgtgaccc
    22801 atgatggtca caaccggcgc gcgcggttca gccgcagccc ccgtgtcacg gtcgctcatt
    22861 accgcctctt ccagctcgtt ttcacgacgc aggataactt tgtggcccat ctcttcagca
    22921 accagctgtg cggtttcctg atcgataacc tggttgatgg ttgccattgc gcccagtttc
    22981 atcatcgctt tgatgacctg agagccttta accgccatct tgttcgccag ttcgccaacg
    23041 gtgatggttt cgccgatcac aacgtcacgg ttaacggcct gagctggctt ctggaagcct
    23101 tgctgcaggg aagaaccttt acgttttccg cctttacctc cacgtactgc tgcgcgagct
    23161 tcttcacgat cagcttttga ttcagcgtgt ttgttgcctt tcttcggacg cgctgctttc
    23221 gcgttacgac cacggccacg gccgccttcg acttcacgat cgctttcgtc ttctgcctgg
    23281 cgagcatgtt gagaagtagt gacgtgataa tcgctggaat cttcagtcgg ttccgcgtta
    23341 tcagtccatt tgttttcttc cgccatacga cgtgcttctt cagcaacgcg acgtgcttct
    23401 tcttcgagtt tacgacgcgc ttcttcttca gctttacgct tgagctctgc agcttcctgc
    23461 tcacggcggg ctttttcagc ctgggcgttt ttagtcatat cgtcttgttg attgctcact
    23521 ttgtcttttt ccgcagcttc acgtttcgct tgttcagcag cttcacgctt agcttgttct
    23581 gcggcctcac gttcagcttt ttgttgcgcc tcgcgtttag ccgattcttc tgcctcacga
    23641 cgggcttgct cttccgcttc acgctgcgct tgctcttccg cttcacgctg cgcttgctct
    23701 tccgctgcaa ggcgttcagc ctcttgcgga tcgcgtttca caaaggtgcg tttcttgcgg
    23761 acttcgattt gtaccgattt gctttttcca ccggtaccag gaatgttaag ggtgctgcgt
    23821 gttttacgtt gcagcgtcaa tttgtccggg cctgaatttt tctgattcag gtggtcaatc
    23881 aaagtctgtt tctcttgtgc ggacacagag tcgtcagcag acttccggat acctgcatca
    23941 gcaaattgct gtaccaggcg ttccacggag gtctgtcgct ctgcggccag cgttttaatc
    24001 gttacatctg tcatgctgtt ccttcctgct acagtttatt acgcttcgtc accgaaccag
    24061 caaatattac gggcagccat aatcagtgct ccggcttttt cgtcggtcac cccttcgata
    24121 tcagccagat catcaatgcc ctgttcggcg agatcttcca gcgtacaaac gccacgggcg
    24181 gccagtttga atgccaaatc acgatctatc ccttcaaggt tcagcagatc gtcagccggt
    24241 ttgttatcac cgaggctttc ttcctgggcc tgtgcaatgg tggccagtgc atttttagca
    24301 cgctcgcgca gtgcttcaac ggtcggctca tcaaggcctt cgatttccaa cagctctttc
    24361 atcggcacat aggccagttc ttccagcgtc gagaagcctt cttctaccag aacagtcgcg
    24421 aagtcttcgt cgatgtcgag atatttggtg aaggtgtcga tcgctgcgtg cgcttccgcc
    24481 tgatgcttag cctgcaggtc gtcaacggtc atcacgttga gttcccaacc gctcagctgc
    24541 gaagccagac gcacgttctg accgttacgg ccaatcgcct gcgccaggtt accggcttca
    24601 acggcgatat ccatggtgtg tttatcttca tccaccacga tagaagcaac gtctgccggt
    24661 gccattgcgt taatcacaaa ctgcgccggg ttatcatccc acaggacgat atcgatacgc
    24721 tcgccgccca gttcagtaga aaccgcctga acacgcgcgc cacgcatacc tacacaggca
    24781 cctaccggat cgatacgttt atcgttggtt ttcaccgcga ttttcgcacg agaacccgga
    24841 tcgcgagccg ctgctttaat ttcaatcact tcttcgccga tttctggcac ttcaatacgg
    24901 aacagttcga tcagcatttc cggcttggaa cgagtgacga acagttgcgc gccacgcgct
    24961 tccgggcgaa cggaatagag cacgccacga acgcggtcgc cagggcggaa gttttcacgc
    25021 ggcagcatat cttcgcgcag gatcacggct tcagcattgt tgcccagctc cagagagatg
    25081 ttgtcgcggt ttactttttt caccacgccg gtgatgattt caccttcgtg ttcacggaac
    25141 tgatcaacca ccatcgcacg ttcggcttca cgcactttct gcacgataac ctgttttgcc
    25201 gtctgggtag tgatacggtc aaaggtaaca gactcaatct gatcttcaac gtaatcgccc
    25261 aggttcaggc tttcatcttc ataacgtgcg gcttcaaggg tgatttcctt ggtcggctgg
    25321 gtgacttcat caacaactaa ccagcgacgg aaggtgtcaa aatcaccgct tttgcgatcg
    25381 atctgtacgc ggacgtcgat ctcttgttca tattttttct ttgttgctgt cgccagcgcg
    25441 ctttccaatg cttcgaaaat cttctcgcga ggtagcgcct tttcattgga tacggcttca
    25501 actacagcca aaatttcttt gttcatcgcg ggcttttcac ctcatccaga ctattaaaag
    25561 tggggaacca ggttcgcctt ctggatatta ctcagcgcga acacttcatc tttaccttcg
    25621 acggtaactg tgatcatttc accgtctacc gctttgataa cgccctgcca tttacgacgg
    25681 ttttgtaccg ccatacggag aaccagagtc acctcttctc cgacaaaacg ggcgtagtgt
    25741 tcagccgtga acagtgggcg atcgagaccc ggtgaggaga cttccaggtt ataagcaacg
    25801 gtgatgggat cttcaacatc cagcacagca cttacctggt ggctcacatc agcacaatca
    25861 tcaacattga tgccatcttc actatcaata tagatgcgca gtgtggatgt gtgaccgcga
    25921 ataaattcga tgccaaccag ttcaaaaccc agggcctcaa ctggcgcagt aatcatctct
    25981 gttaattttt gctctaatgt ggacaagccc acccccaaga cataaaaaaa gggcctaaag
    26041 cccagttatt ctgtagtcag ataacaaaaa accccgataa atcggggctt tatataactg
    26101 aaccctataa ccgcaactgc ggtctggagc actttccaga aggatttttt caaatcccac
    26161 tacgaaggcc gaagtcttca cagtatattt gaaaaaggac tctaagggaa agtggttgcg
    26221 ggggccggat ttgaaccgac gaccttcggg ttatgagccc gacgagctac caggctgctc
    26281 caccccgcgc ctgaaactcg gcaaattcta ctcgttttgg gtaaaagatg caaatactgc
    26341 tgggatttgg tgtaccgaga cgggacgtaa aatctgcagg cattatagtg atccatgcca
    26401 cattttgtca acgtttattg ctaatcacgt gaatgaatat ccagttcact ttcatttgtt
    26461 gaatactttt gccttctcct gctctccctt aagcgcatta ttttacaaaa aacacactaa
    26521 actcttcctg tctccgataa aagatgatta aatgaaaact catttatttt gcataaaaat
    26581 tcagtgagag cggaaatcca ggctcatcat cagttaatta agcagggtgt tattttatga
    26641 cgacgattct caagcatctc ccggtaggtc aacgtattgg tatcgctttt tctggcggtc
    26701 tggacaccag tgccgcactg ctgtggatgc gacaaaaggg agcggttcct tatgcatata
    26761 ctgcaaacct aggccagcca gacgaagagg attatgatgc gatccctcgt cgtgccatgg
    26821 aatacggcgc ggagaacgca cgtctgatcg actgccgcaa acaactggtg gccgaaggta
    26881 ttgccgctat tcagtgtggc gcatttcata acaccaccgg cggcctgacc tatttcaaca
    26941 cgacgccgct gggccgcgcc gtgactggta ccatgctggt tgctgcgatg aaagaagatg
    27001 gcgtgaatat ctggggtgac ggtagcacct ataaaggaaa cgatatcgaa cgtttctatc
    27061 gttatggtct gctgaccaat gctgaactgc agatttacaa accgtggctt gatactgact
    27121 ttattgatga actgggcggc cgtcatgaga tgtctgaatt tatgattgcc tgcggtttcg
    27181 actacaaaat gtctgtcgaa aaagcctact ccacagactc caacatgctt ggtgcaacgc
    27241 atgaagcgaa ggatctggaa tacctcaact ccagcgtcaa aatcgtcaac ccgattatgg
    27301 gcgtgaaatt ctgggatgag agcgtgaaga tcccggcaga agaagtcaca gtacgctttg
    27361 agcaaggtca tccggtggcg ctgaacggta aaacctttag caacgacgta gaaatgatgc
    27421 tggaagctaa ccgcatcggc ggtcgtcacg gcctgggcat gagcgaccag attgagaacc
    27481 gtatcatcga agcgaaaagc cgtggtattt acgaagctcc ggggatggca ctgctgcaca
    27541 ttgcgtatga acgtctgttg accggtattc acaacgaaga caccattgag cagtatcacg
    27601 cgcatggtcg tcagttgggc cgtctactgt accaggggcg ttggtttgac tcccaggcgc
    27661 tgatgctgcg tgactctctg caacgctggg ttgccagcca gatcactggt gaagttaccc
    27721 tggagctgcg ccgtgggaac gattattcaa tcctgaatac cgtctcagag aacctgacct
    27781 acaagccaga gcgtctgacg atggaaaaag gcgactcggt gttctcgcca gatgatcgta
    27841 ttggtcaatt gaccatgcgt aatctggata tcactgatac ccgagagaaa ctttttggtt
    27901 atgccaaaac tggcctgctc tcctcctctg ccacttcagg cgtgccgcag gtggagaata
    27961 tggaaaacaa aggccagtaa ttcgacatca accctgccct tcaggggggg ggttaccttg
    28021 cttatcctct gtaaactcct ttctgaacat cacataatcg aaaacatcat ggtttgcatc
    28081 cacaacccgt gagtctcctt tatagtgtgc aatcacttcc tcaagcgttt gcggctgttc
    28141 cggctttgtt acccccatcc acgcattaat aaggtaatta ttgtaagctg tcgaaaagat
    28201 gttgttttcc gttgtgcgat ccacgccatc cccaagaacg gggctatacc agataaacat
    28261 cgggacatga tatgcctgct ggctagcctc cctgcctcca tgaaaataga cgttcttctt
    28321 cgtagggtca cgttccaggc cgtggtcggc aaaatacatg accgaggcgc ggcgatcttt
    28381 taataattca aaaacctgac ctagcaaact atctgtgtaa tgaatggagt tgtcatagca
    28441 ggcatcctga tcgtcctgcg gttgaaacac ggcgctggat tgcggatagg cgctacaagc
    28501 cggttcatgg cttccattta aatgaagaac aatcagtttc ttttgctgcg tattttgctg
    28561 taatgcttgc gataaatgcg gcaacaacaa ttcatcaaat cctctgacat aaactgtttc
    28621 catggcgcgc atggcgatac tggtaactgc agtaccattc tgccgaaaag cggattgcga
    28681 gcttagccag aaagtctgaa atcctgcttg attagccata ttaataatgt tgtcggggta
    28741 attatgaatg tcatgactca aaacagaatc agcagttaaa gaaaggggaa ccgacagcgc
    28801 agtgtaaggt gcgccgctta ttgcttgatt aaacagtttg atctgttttc tttgtgcttc
    28861 aacttgcggt gtcgtagagc gtgtatatcc atacaaagac atattgtcga cacgtacaga
    28921 ctcccccaca atcaacacgt aggtatcaat acctgtatcc ctgactgata attgaaaata
    28981 cggcaccgtg tttgcaattg agagtaatct ttgatgctct ttcgctgcta aagcaaaata
    29041 gttgagattg aaaaacggcg tataggtagc aaatcgcgac gctagtatat atggactgaa
    29101 cgttttttta ttttttgcat ctttataagc aaattgacaa gcggaaaata aactgcccga
    29161 aatgacaatc agcaataata ttcctgtcac tttttttgtc ggcaaggaaa catcatattt
    29221 tattattact gcccaaaaaa gaagggataa aaaagcaaag gcacatagat aagggatata
    29281 catccccagc attttgacaa cttcatccgg atcactctgg agcacactaa tcgcaaatcc
    29341 atcattgaaa gttgtaccaa aggtacacca tgaatagagg ctaatactca tgtctgccgc
    29401 agtcagtaac acaaatggtg cggcaacaag cagacgaagc ggaagggatg atatacgttt
    29461 tacaaccagg atggtcagga cgaagaacag caatcgctga accatatgcg cgccggaaga
    29521 ggcgactaag ttcgtaatac caaaaacaat aacacaaaga tacaacaacc aatgagattt
    29581 aaaacttcta gcaaatttgt tgaatactgt catccagaaa tccaagttca caaccaatat
    29641 aaacaattat caacaatgtt caattttata tcagacatgt ttttcaactc tgatccatat
    29701 cagaccgaaa cactgttagt tttttctttt taaatgatgc ggccattgcg ttctcagtaa
    29761 ttaaataaca ttatcaatgc gtctctaaac attacgcaga acgtagccat cagtagttat
    29821 actgacagga gcaggatggt ttatcgagaa gtaaacatat ccgtattcgt accggaactg
    29881 gagttgacac aataaagtgc caattatgtc agcagaaggg aaaagtttat aactaaggcg
    29941 taccggcacc atcgtttcaa ggtaccagct acgagtaaag caactggacg agatacagat
    30001 acctgacaac cattcctcag accaggacca aaacgaaaaa agacgctttt cagcgtctct
    30061 tttctggagt ttggtaccga ggacgggact tgaacccgta agccctattg ggcactacca
    30121 cctcaaggta gcgtgtctac caattccacc acctcggcac ggatactact ttttagttcg
    30181 ggatatcgct ggtcggctta gccggagcag ctggttgagt ttgttcggtt ttcgccggtg
    30241 cactcagatt ttcccattcg ctacctttat tggttttgtt gctgttgatg ttacccagca
    30301 ccagactgat gatgaagaat aacgttgcca gcagcgccgt catgcgggtc atgaagttac
    30361 cagaaccact tgaaccaaac agcgtagcgg aagcgcctgc tccgaaggag gctcccatat
    30421 cagcgccttt accttgctgc agcatgatca gaccaacaag gccaattgcc acaataagga
    30481 aaactaccaa aagagcttcg tacataatca acctgttcct tgcggagttg ccgcgtacca
    30541 atgcttcaac caataaagcg ggagttttta atctttccca ctgaagcggg tgtgaatact
    30601 aaccaaagcg aatgaccttc gcaagggcaa ttttatcgca ttgtatcaac tgcggaaaaa
    30661 aacagcaaaa ccgatgtatt cgctgagaaa aaaggcgaca atcgccgcct ttttagccag
    30721 tcatttatcg ttttaaacgg cttttactgc atcggcgatg cggtgtgcaa attcagtcac
    30781 ctgcgcttcg tcttcgcctt ccaccatcac gcgaattaac ggttcggtgc cggatttacg
    30841 cagcaacacg cgtccacggt tgcccagcgc agcttcaacc tctgcggtca cggctttaac
    30901 tgactcatgc tcaagcggat cgccgctacc tgcggtgtaa cgcacgttaa ccagaatctg
    30961 cgggaacatt ttcatgccgc tgcaaaggtc gtgcaggctc atatggttac gtgccatcgc
    31021 cgccagcacc tgcaagccag caacgatgcc gtcaccggta gtggttttat ccagcaggat
    31081 cacatgaccg gaattctctg caccgatacg ccagcctttc tcctgcattt tttccagtac
    31141 gtagcggtca cccactttcg cgcgcgcaaa tggaatacct aactgtttca gcgccagctc
    31201 aagccccatg ttactcatca atgtacccac agcaccacca cgcagctggc cctgacgaag
    31261 accttcacgc gcgatgatat acatgatctg atcaccatcg actttattgc cttcatggtc
    31321 aaccataatc acgcgatcgc cgtcgccgtc gaaggcaata ccgagatccg ctttttcagc
    31381 cagcacacga gcctggagcg cgcgaacgtc ggtagccccc acttcggcat tgatgtttac
    31441 accgttcggc tcacaaccga tagcgataac gttcgccccc agttcacgca gcacgttcgg
    31501 cgcgatgtga taagtcgcac cgtttgcgca atccaccaca atcttcagtt cgctgaggct
    31561 aagttcgttc gggaacgtgg ctttgcaaaa ctcgatatag cgacccgcag catcaacgat
    31621 acggctggct ttacccagtt ctgccgaatc aacacagctg atctcttttt ccatttccgc
    31681 ttcgatggcc tcttctaccg catccggtag tttggtgccg tcgatagaga aaaatttaat
    31741 gccattatcg tagaacgggt tatgcgatgc agatatcaca attccggcct ctgcgcggaa
    31801 ggtacgcgtc agataagcca cggccggtgt tggcatcggg ccagtgaaga gtgcggaaag
    31861 gcccgctgcc gccagacccg cttccagtgc tgactccagc atatagccag aaatacgcgt
    31921 gtctttacca ataatgatct tacgggagcc gtggcgcgcc agcactttac ccgcggccca
    31981 acccagctta agcacaaaat caggtgtgat cggcgcatcc cctacacgac cacgaatccc
    32041 atcggtaccg aaatatttac gattactcat agcgtttgtt ttcctttgca gacagagtgg
    32101 cttccaccac ccgcatcgct tctacggttt ctttgacgtc atgaacacga ataatgtgcg
    32161 cgccttgcat tgcggcaatg accgcacagg ccagactacc gctcaggcgc tcggacggcc
    32221 ccacgttcag cagctgccca atcatcgatt ttcgtgacat acctaccaac agcggcaggt
    32281 tgaaatggtg aaattcagcc aggcgcgcca gtaatgaata gttatgggag agatttttac
    32341 cgaaaccgaa tccggggtcg agcaacaatt tctcttttgc gatacccgcc tgctcgcaac
    32401 gtgctatttg ctcaataaag tagcgattca cttctgcaaa gacatcgtca tacttcggag
    32461 cttcctgcat ggtttttgga tttccctgca tatgcatcag acaaaccggt aaaccggttt
    32521 ctgccgccgc ctccagagcg ccaggttcgg aaagggagcg gatatcgtta ataatgtgag
    32581 cgccaacttt cgctgactca cggatgactt ctggtttgga tgtatctacc gagagccaga
    32641 cttcgaagcg ttgagcaatt gcctcaacca caggaataac acgttgcaac tcttcttcaa
    32701 cgctaacttc cgccgcccct gggcgcgtgg actcgccacc aacgtcaatg atcgtcgcgc
    32761 cagcgttgat catcagattc gcatgtttca ccgcatctat cagcgagtta tgcgtgccac
    32821 catccgaaaa ggaatcaggc gtgacgttga ggatccccat tacgtgagga tggctaaggt
    32881 ccagtgaagt gccctgggca aagagtttca tggtgttatc cctggtatga attgataaga
    32941 aaaaaccccg gagcacgccc cggggttttc ggtacaaata cagtcatctg atgcgggaac
    33001 ttacttgtcg cctaactgct ctgacatggt gttacccggg ttcggcgtac gcggttcatc
    33061 aaccggacga ggagcctttg gactaccatt gtcgccagaa ttgttagaag cgcctggttc
    33121 ttcccagccc gctggcggac gtacatcgcg acgtgccatc aggtcatcaa tctgcggtgc
    33181 gtcgatagtc tcatatttca tgagagcatc tttcatcgca tgcagaatat ccatattgtc
    33241 ggtcagaagc tgacgcgcac gattatagtt acgctcaatc agtgctttca cttcctggtc
    33301 gatgatacgt gcagtttcat cggacatatg tttcgctttc gctacgctac ggccgaggaa
    33361 cacttcacct tcttcttccg cgtacagcag tggacccaat ttctcagaga agccccactg
    33421 agtcaccata ttacgcgcca ggttggtcgc aactttaata tcgttggacg caccggtaga
    33481 aacatgttcc ggcccgtaga tgatctcttc tgccagacga ccaccgtaca gcgtagaaat
    33541 ctggctttcc agtttctgac ggctggcgct gattgcgtcg ccctcaggca agaagaaagt
    33601 cacacccagc gcacgaccgc gtgggataat cgtcactttg tgcaccggat cgtgttccgg
    33661 caccaagcga ccgataatcg catgacccgc ttcgtggtaa gccgtcgatt ctttctgcgc
    33721 ttccgtcatc accatggagc gacgttccgc acccatcatg attttatctt tcgctttttc
    33781 gaactcaatc atcgacacaa cgcgtttgtt gccacgagca gcgaacagtg ccgcttcgtt
    33841 taccaggttc gccaggtcag caccggagaa accaggagta ccacgggcaa tgattgccgc
    33901 gtcgatatcg ggtgccaatg gtacgcgacg catgtgaact ttcaggatct gctcacgacc
    33961 gcgaacatct ggcaagccaa ccacaacctg acggtcgaaa cggccaggac gcagcagggc
    34021 tgggtcaaga acgtccggac ggttagtcgc ggcgataacg atgatacctt cgttaccttc
    34081 gaagccatcc atctcaacca gcatctggtt cagagtctgt tcacgttcat cgtgaccacc
    34141 gcccagacca gcgccacgct ggcggcctac ggcgtcgatt tcatcgataa agatgatgca
    34201 cggtgccgct ttcttcgcct gttcgaacat gtcacgaaca cgggatgcac ccacaccgac
    34261 gaacatttct acgaagtcag aaccggagat agtaaagaac ggaactttcg cttcgcctgc
    34321 aatcgctttc gccagcaacg ttttaccggt acccggagga ccgaccatca ggacgccttt
    34381 cgggatctta ccgccgagtt tctggaagcg gctcggctcg cgcagatact ctaccagttc
    34441 agcaacttct tcttttgctt cgtcgcagcc cgcaacgtca gcaaaggtcg ttttgatctg
    34501 atcttccgtc agcatgcgcg ctttgctctt accaaacgac atggcacctt tgccaccgcc
    34561 gccctgcatt tgacgcatga agaagatcca gacaccaatc agcaacagca tcgggaacca
    34621 agagatgaag atagaagcca gcaggcttgg ttcttcaggc ggttcaccga caaccttgac
    34681 gttcttggtc aacaggttat ccagtaattt cggatcctga accggaatgt aagtggtata
    34741 acggttacta tctttcttgg taacgttgat ttcacgtccg ttgatacgcg cttcacgaac
    34801 ctggtcgtta ttgacctctt gtaggaaggt agagtaatcc accttacggc cattagactc
    34861 gctgggccca aagctctgga atactgacat cagcacaacg gcaatgacca gccagagtat
    34921 taggtttttc gccatgtcac tcaagggatt aacctcttat tacaactgtg ttaaaaacag
    34981 cgtcaggata ctctatatcc agcatctttc aaactttcgt ctgaaatctc ccggttaggg
    35041 tttacgcccg gtcgctacaa tatacacttc ccgcgaacgt gcacgagaag agtccggctt
    35101 acgaactttg accttcgtaa acagggagcg aatttccctt agatactcat cgaaaccttc
    35161 gccctggaac accttcacta caaaactgcc acctggcgct aatacatcac gacacatttc
    35221 taacgccagt tccaccagat acatggcacg ggggatatcc accgccggtg ttccgctcat
    35281 gtttggtgcc atatcggaca tgacaacctg gactttgctg tcgccaacgc gctccagcag
    35341 tgctttcatc accagttcat cacgaaaatc gccctgaaga aagtccacac caacgatagg
    35401 atccataggt aaaagatcgc aagcgatgat gcggcctttg ccgccaattt gggtgaccac
    35461 atattgtgac caaccacccg gagcagcacc aaggtcgaca accgtcattc ccggtttaaa
    35521 gagtttgtca ctttgctgta tttcatcaag tttaaaccag gcacgggaac gtaacccctt
    35581 tttctgtgcc tgttgaacat atttatcgct aaagtgttcc tgaagccagc ggctggagct
    35641 ggcagaacgc ttcttacctg tcatttaact ttcccatggg gataactcat cgtaaccaat
    35701 tgcgtaaatt tttacgcgcc tatttggtga tatatgggag atggcggtag aatgacccgt
    35761 tttcaatccc aacgtaagca aaaaatacga tgaatctgag tactaaacaa aaacagcacc
    35821 tgaaaggtct ggcacatccg ctcaagccag ttgttctgct tggcagtaat ggtttgaccg
    35881 aaggggtgct ggccgagatt gaacaagcgt tagagcacca tgaactcatc aaggtgaaaa
    35941 tcgccaccga agatcgcgaa acaaaaacct tgatcgtgga agctatcgtg cgcgaaaccg
    36001 gcgcctgtaa tgtacaggtc atcggtaaaa cgctggtgct ttatcgccca actaaagaac
    36061 gtaaaatctc gctgccacgc taagattatc ctaaagttac acacatttgc tgtgtaaaac
    36121 gaggggtttt ccgcaggcag gagagcaaaa tgccacgctc tgttcgttga taaaaggccg
    36181 catagcggcc tttttccttt ctttacaata catcaacatc ttgatgtatt gggtaattct
    36241 tacaggtatt ccaccttaat tacttcaaat tctacttcgc cgcccggcgt tttgatgacc
    36301 acaacatcat cttcttcttt gccgatcagg ccacgagcaa taggcgagtt tacagaaatc
    36361 aggttttgtt taaagtcagc ttcgtcatcg ccaacgatgc gataagtctg ttcttcgtca
    36421 gaatccagat tcagcaccgt tacggtagca ccaaaaataa cgcgcccatt gttgggcatt
    36481 ttggtgacat caatcacctg cgcgttcgac agcttggctt cgatgtcttt aatacggcct
    36541 tcgcagaaac cctgctgttc acgagctgcg tggtattcgg cgttttcttt caggtcgcca
    36601 tgctcacgcg cttccgcgat agcagcaatg atttcaggac ggcgcacaga tttcagaaaa
    36661 tccagctctt cgcgtaattt ttcagcgccg cgtaaggtca tcggaatagc ttgcatttgt
    36721 tatacctctt gaatattcct gatggggcaa gtcttcaccc accccggctg ttcggcctgc
    36781 ccggcataac tcctcaccgg gaccagaagc aaaaaaatac cgacccgggt acaagtccca
    36841 ggtcagctac aattcacatt ttgatagtca ttttaccctg aagttcccga agggtcatcg
    36901 tttactttat agggcgttgc gccgtagtat gacggctcga ttccaggttg ttagcgcgag
    36961 attatgcgat tttccagatt tatcatcgga ttgaccagct gtatagcgtt cagtgttcag
    37021 gccgcgaatg ttgatgagta cgttactcaa ctccccgctg gtgccaacct tgccctgatg
    37081 gtgcaaaaag tcggcgcgtc ggcccccgct attgattacc acagtcagca gatggcgctg
    37141 cccgccagta cgcagaaagt gattactgcg ctggcggcgt tgattcaact cggccccgat
    37201 tttcgtttca ccacgacgct tgaaaccaaa ggcaatgtgg aaaacggcgt acttaagggt
    37261 gacttagtgg cgcgatttgg tgccgatccg acgttaaaac gtcaggatat tcgcaatatg
    37321 atcgcgactt tgaaaaaatc tggcgtcaac caaatcgatg gcaatgtgtt gatagatacc
    37381 tccattttcg ccagccacga taaagccccc ggctggccat ggaatgacat gacacaatgc
    37441 tttagcgctc cgcctgccgc tgccatagtt gaccgcaact gtttctccgt ctcgctctac
    37501 agtgccccaa aacctggtga tatggctttt atacgcgtgg catcttatta ccccgttacg
    37561 atgttcagcc aggtacgcac cctcccccga ggttctgccg aagcgcaata ctgcgaactg
    37621 gatgtcatac caggcgacct gaaccgcttt acgctgacgg gatgcctgcc acaacgttct
    37681 gagccgctcc cgttggcttt tgccgtgcag gatggagcca gctatgccgg ggcaattctg
    37741 aaagatgagt taaaacaggc aggtatcacc tggagcggaa cactgctgcg ccagactcag
    37801 gttaacgaac ctggaacggt agttgccagt aaacagtcgg ccccgttgca cgatctgctt
    37861 aagattatgc tgaaaaagtc ggacaacatg atcgccgata cggttttccg catgataggc
    37921 catgcgcgct tcaatgtgcc tggaacatgg cgggccgggt cggacgccgt gcgtcagatc
    37981 ctgcgccagc aagccggtgt cgatattgga aacaccatta ttgccgatgg ttcagggctt
    38041 tcgcggcata acctgattgc ccccgccacc atgatgcagg tgttgcaata cattgcccaa
    38101 cacgacaatg aacttaactt tatctccatg ctgccgctgg cgggctatga tggctctttg
    38161 cagtaccgtg caggtctgca tcaggcgggc gtggatggaa aagtctcagc gaaaaccggt
    38221 tcgttgcagg gggtatataa cctggcggga ttcattacca cagcgagcgg gcaacgaatg
    38281 gcgtttgtac aatatctttc tggctatgca gtagaaccgg cggatcagcg taatcgccgt
    38341 attccgttag tgcgttttga aagccgtttg tataaagata tttatcagaa caattagtca
    38401 aaaagaaacc ccggcacatg gccggggttt tgctgattaa cgcttgtaaa tgaactcaac
    38461 gccttcttcg tcgtcttcgt cccagtcatc atcccagtcc tcatcatcct cttcagcaat
    38521 ctcttcaagc tgctggcgat gataatcatc ccacatgaat tcgactttct ctggctgttt
    38581 cgcttcttca gcctgcacga ccgggttttc aatgataaag gtcatcacat cccagcagag
    38641 atctttcacg cccagtccac tcgccgcaga gatcagataa tatttatctt cccagcccag
    38701 cgcttcagca atcgctttcg ctttctcttc agcttctgcc ttatccagca gatcgatctt
    38761 attgaacact aaccaacgcg gtttcgccgc cagatcctgg ctgtattttt ccagctcgct
    38821 gataataata cgcgcgtttt caaccggatc ggtgccgtca atcggatcga tatcgatgag
    38881 gtgcaacagg acgcggcaac gttccaggtg cttcaggaag cggataccca gacctgcgcc
    38941 ttccgcagcg ccttcaatca gtcctggaat atcggcaaca acgaagctct tttcgttgtc
    39001 cattcgtacc acacccagac ttggcaccag agtggtaaac ggataatccg ccactttcgg
    39061 tttagccgcc gataccgcgc gaataaaggt cgatttaccc gcgtttggca tccccaacat
    39121 accgacgtca gccagcagca tcagctccag cagcagctca cgcttatcac ccggcgtacc
    39181 gttggttttc tgccgtggtg tacggttaac ggacgatttg aaacgggtat tgcccagacc
    39241 gtgccagccg cccttagcaa ccagcagacg ctgaccgtgt ttagtcatat cgcccatggt
    39301 ttcaccagta ccctggtcga ttacacgcgt acctaccggc actttaatcg tcacgtcttt
    39361 accgcgctta ccggtacaat cgcggcttgc gccgttctga ccgcgctctg cacggaaaga
    39421 tttttcaaaa cgataatcga taagcgtgtt caggttttcg tcggcttcca tccatacgtc
    39481 accaccatca ccaccgtcgc cgccatccgg gccgcctttc ggaatatact tttcgcggcg
    39541 gaagctcacg caaccattac cgccatcacc tgcaacgacc agaatcgatg cttcatcaac
    39601 aaacttcatt ttattctccg taaatcattc gcctgcgcgg ggttgcgata ccaccgttgt
    39661 atgcttacgt aatccgcccc aaatacgatg accaatggcg gaatacatcg cgcccgcaac
    39721 cacgacaaac gcaccgagat aacctaaaag gtttaacatc ggtctggcga agaaatcggg
    39781 ccaggccagt gataaaagat ctgaaaaaaa cagcgtaaac agtggggtga gcgtgatgat
    39841 cgcgctcacc tgcgctgcct gccagcgagc catcgcttcc gccagggcgc catatcctac
    39901 caatgtattc agtccgcaaa aaattaaaca tgcgagctgc cagtggctaa gctgcgctat
    39961 cactcctggc tttgccagag ggaagagcgc aattgtacat aaagtgtaca gcaaaaacag
    40021 gatctgcggt gaggccagcc gacgcaataa aaccttttgc gccacgccat aactcaccca
    40081 aaccgtcgcc gcaccgaccc caaagatgac tccccaggtg taatcagtga gctttgtaaa
    40141 tatctcgacc agactggtgt taaaaaacat caccaggccg ctcaggagca tcaatgcccc
    40201 tacaacctga gtgctgcgca ttttctcttt caggataaat acgctggcaa ccatcatgcc
    40261 aactggcgag agttgcccaa tcacctgcga agcggtcgga ctcaggtatt gcaaggatga
    40321 gctgaacagg atgaagttcc caaacagccc ggcggtcgcc actgccaaca aaatcaacca
    40381 gcgtggctta cgaaacacgc gtaatggcgg caacctcttc ttcaccgcaa gaatggcacc
    40441 caggccaata ctcgccatca agaaacggta aaacacgatt gtcggaggtt ccatcacctc
    40501 cagcacctgc ttcattgcga ttggcaacgc cccccagcaa attgctgtgg tgagcgccaa
    40561 aagaatgcca atgcctgcct gctgcttcat accgtattcc ctgcaaagcg catttgcgga
    40621 ttaacgccgc accatgctca tttttaccgg ttatcgaatg taaaaagccc cgcaacgtgt
    40681 tgcggggctt tcatccgtta ccgggacgcg aaaaacttat tcagcttcga tgctgataaa
    40741 tttacggttt ttcgggcctt taacttcgaa tttcacttta ccgtctgctt tagcaaacag
    40801 agtgtggtca cgaccgcaac ctacgttagc gccagcgtgg aatttggtac cacgttgacg
    40861 aacgatgatg ctacccgcca gaacggattc gccaccgaaa cgcttaacgc ccaggcgttt
    40921 agcttctgaa tcgcgaccgt tacgtgtgga gccgccagcc tttttatgtg ccatttgaaa
    40981 tctctcctca ggtcttaggc gctgatgcca gtaattttca catcagtgaa ccactgacga
    41041 tggccctgct gcttacgata gtgtttacga cgacgaaact taacgatttt aactttctcg
    41101 ccacgaccgt gagcaacaac ttcagctttg attacgccgc catcaacgaa aggaacgccg
    41161 attttgactt cttcaccgtt tgcgatcatc agcacttcag cgaactcaac agtttcgcca
    41221 gttgcgatgt ccagcttttc caggcgaacg gtctgacctt cgcttactcg gtgttgttta
    41281 ccaccacttt ggaaaaccgc gtacatataa aactccgctt ccgcgcacac cttttcaatg
    41341 attcagagtg cgctataaat attcacaata gggcgcgaat attacgcaaa acgcacgcct
    41401 ttgacaagtg ctacagtcaa tacacgaaga aaaaaaacac aacttgtacg gtaacgttta
    41461 tctgtgccat tttttcagta caatcaccct atattcctaa ccataaaccc taagttgcct
    41521 ttgttcacag taaggtaatc ggggcgaaaa gcccggcttt tgcgatgaat ttagaaaaaa
    41581 tcaatgagtt aaccgcgcaa gatatggcgg gtgttaatgc ggcaatcctt gagcagctta
    41641 attccgacgt ccaactgatc aatcagttag gctattacat cgtcagcggc ggcggtaaac
    41701 gtattcgtcc gatgattgct gtactggctg cacgagctgt tggctatgag ggaaatgcgc
    41761 atgtcaccat tgctgccctg atcgagttta tccacacggc gactctgcta cacgacgacg
    41821 ttgtggatga atcagatatg cgcaggggta aagctaccgc caacgctgca tttggcaatg
    41881 ccgccagcgt gctggtaggc gattttattt atacccgcgc gttccagatg atgaccagcc
    41941 tcggttcact caaagtgctg gaagtcatgt cagaagctgt aaacgtcatc gcagaaggtg
    42001 aagttctgca actgatgaac gttaacgatc cggacatcac tgaagaaaac tacatgcgcg
    42061 ttatctatag caaaaccgcg cgtctgtttg aggctgccgc gcagtgttcc gggattctgg
    42121 ctggctgtac gccggaggag gagaaaggcc tgcaggatta tgggcgctat ctcggcactg
    42181 ctttccagtt gatcgacgat ttactcgatt acaatgccga tggcgaacag ttaggtaaaa
    42241 acgtcggcga cgatctgaac gaaggtaaac cgacgctgcc gctgctgcat gcgatgcatc
    42301 atggcacacc agaacaggca cagatgatcc gtaccgccat cgaacagggt aacggtcgcc
    42361 atcttctgga accggttctg gaagcaatga acgcttgtgg atctcttgaa tggacgcgtc
    42421 agcgcgccga ggaagaagca gacaaagcca tcgcagcgtt acaggtgctc ccggacaccc
    42481 cttggcgaga agcactcatc ggcctcgcgc acatcgctgt tcaacgcgat cgttaatccc
    42541 ctcccttcat cccgcgcagt gcgcgggatg attccagtaa attccataaa aacactaatt
    42601 cagcgctata acacctgaaa aaaagggcga tgaatcttta tatattctga atattcacac
    42661 tctttacagg aactttttag agcaataggc catcaggagt atagtgatgc ccgacagaag
    42721 aagtgttctg aatgaaagcg actaacttaa ggagtgagga aagatggaaa gtaatttcat
    42781 tgactggcat ccccctgaca tcattgcagg tttgcgcaag aaaggaacgt caatggcggc
    42841 ggaatctcgc agaaatggtt tgagttcctc aacgctggca aacgcattat cgcgcccatg
    42901 gccgaaagga gagatgatta ttgcgaaagc cctgggaact gacccctggg ttatctggcc
    42961 atcacgctac catgatccgc agacccatga gtttatcgac agaacgcagt tgatgcgtag
    43021 ctacactaaa ccgaaaaaat gagtggtctg gcggtagccc cgcgaacggg gctgccagct
    43081 ctcagacgat tactcgcctt tcacacgctt aatatttgca cctaaagcgc gcagtttgtc
    43141 ttcaatgcgt tcgtagccac gatcgatgtg ataaatacga tcaaccaccg tcgtcccttc
    43201 cgcaatacag ccagccagca ccaggcttgc tgatgcacgc agatcggttg ccataacctg
    43261 tgcaccagaa agtttttcaa caccatgaca aataacggta ttgctttcga tttcggcatg
    43321 cgcgcccata cggctaagct ccggcacatg cataaagcgg ttttcaaaga ccgtttcggt
    43381 gatgaatccg gtcccttctg ccaccaggtt caacagcgtg aactgggcct gcatatcggt
    43441 cgggaatgcc ggatgcggcg cggtacgtac gttaacagcc ttcggacgtt tgccatgcat
    43501 atccaggcta atccagtctt cgccgacttc gatgtccgct ccagcgtcac gcagtttcgc
    43561 cagcacggcg tcgagagtat ctggctgcgc gttacggcag ataattttgc cgcgagaaat
    43621 cgccgccgcc accaggaaag taccggtttc gatacgatcc ggtagcacgc gatagacacc
    43681 gccgcctaaa cgttccacac cttcgatgac gatacgatcg gtgccctgac cgctaatttt
    43741 cgcacccagc gtaatcagga agttcgcggt atcgacgatt tccggttcac gcgctgcgtt
    43801 ttcaataatc gtggtacctt ccgccagggt tgcagcacac atgatggtca ccgttgcgcc
    43861 aacgctgact ttatccatca cgatatgtgc gcctttcaga cgaccatcga cggaagcttt
    43921 aacgtaacct tcttccagtt tgatggtcgc gcctaattgt tcgaggccag aaatgtgtag
    43981 atcaaccgga cgcgcaccga tcgtacaacc gccaggcagt gaaacttgcc cctgaccaaa
    44041 gcgcgctacc agcggcccca gtgcccagat agaagcacgc atggttttaa ccagatcgta
    44101 aggtgcgcag aatacattaa cgtcgcgggc atcaatatgc acagaaccat tacgttctac
    44161 tttcgcaccc agctgactta gcagcttcat tgatgtatcg acgtctttca gtttcgggac
    44221 gttctggatc tctaccggtt cttccgccag tagagcggca aaaaggatag gcagagcagc
    44281 atttttagcg ccggaaattg tgacttcgcc ctggagcttc gttggcccct gaacacgaaa
    44341 tttatccatt tagtttgttc tcagttaaca attcatatcc gctaccggcg aatcgcccat
    44401 agctcaaaag ccgttcagtt tgcgatcgcg cgcccactcc gcaggggtat acgctttgat
    44461 cgacacagca tgaatgcggt tatccgcaat atattccatc agcgggccat agaccgtctg
    44521 ctgtttttta acccgactca tgccgtcaaa caactcaccc acggcaataa cctgaaagtg
    44581 gctgccatcg ccggaaacgt ggacttcctg gagggagaga gcgttcatca acacgctctg
    44641 aatttcatta ttttccatgg gatcttcaat catcagttaa taaaccagcg aaacatctta
    44701 gagcaaagtt gcgctggcat aaataagcaa aaagcctcgc tgataaatca gacaaggctc
    44761 gacttgcagg caggtttgcc ggacaggcgg ttaacgccat atccggcctg aaaaaattta
    44821 acgaggcaga acatcagcag gcaaattata caatttcgcc agggtataca ctttgtcgtt
    44881 taccccctga agcgtcacat tgttgccctg ctttttcgcc agatcgataa gatggagcag
    44941 cagtgccagt ccccccgtat ccacgcggga cacacggcta agatcgatgc aggtaatccc
    45001 cttcaccgct tcctcacgca tttcccaaag cggtagcaaa acgtcctgat ccagctctcc
    45061 ggataacgcc agcgtgtcac ccgtctgcat ccagctcagt gactcgctca ttattttttc
    45121 tcttccagag tgattttctg ttgagaaatc gatttcagtt gcgcagtcag gccgtcgata
    45181 cctttggtac gcagcagcgt tccccactcg ttttgtttgg tggtgatcat actgacgcct
    45241 tcagcaatca tgtcgtaagc ctgccagttg cccgtctggg agtttttacg ccactggaag
    45301 tccagacgca ccggcgggcg gccattcgga tcaataatgg taacgcgaat cggcacaatg
    45361 gttttatcgc ccagcggctg ttctggcgca atctgatagg tttgaccatg atacatcgcc
    45421 agcgcctgac cgtaagcctg cttcaggtac tcacggaaag cggcaaagta ggcttcacgt
    45481 tgagcagggg tcgcactctt gtaatactgg cccagcacca gcgcaccggc gtatttcacc
    45541 tgtacgtatg gcagcagttc ctgatcaaca atggtacgca gataatccgg gttggcccga
    45601 atttgcggtt gctcattctt caggcgatcg aacgttttct gcgccgcctc gtccatcagc
    45661 ttataaggat tggtctggtc tgccgcggtt gccgcactca gcggtgcaat caccagcaaa
    45721 gcgaccatca ttaaacgttt aaacatgcgt cggttctcct gaaattattt cgttgtaccc
    45781 acaggttcag tggtttcatt attacctggc gcagcagctg gcgcatcgcc actattctta
    45841 ttgtcatcgc ctttactacc gtaaaggaac tgaccaatga gatcttccag caccatcgca
    45901 gacttagtgt cctgaattgt atcgccatcc ttcaggatag cagtccccag ttccgggtct
    45961 tcaaaaccga cgtttaatgc cagatattgt tcccccagta ggccggaagt acgaatgctc
    46021 agcgaactgg tatctggaat gtggttataa cgttgttcaa tttccagcgt tacgcgtggc
    46081 agataggttt tcgggtccag cgtaatatcc gccacccggc ccacaacaac gccaccaata
    46141 ctgaccggag agcgcgcttt caggccgcca atgttatcga acgtcgcata aagcgtgtag
    46201 gtcggttcag tacgtatgga cgtcacgttc gccgccttca ggcaaacaaa cagagccgcc
    46261 agcagtgctg ctaataaaaa gatacccacc caaatttcat tttttttcgt ttgcatgtac
    46321 tcaattccca aacatcaatg cggtcagcac aaaatccagc cccagaacag ccagagacga
    46381 gtggacaacg gtgcgagtgg ttgcccggct aatcccggca gacgtcggga tggcgtcgta
    46441 gccgttaaac aacgaaatcc acgtcaccgt gatggcgaac accacgctct taatcagaca
    46501 gttgaccaga tccatacgcc agtcgacggc attttgcatt gccgaccaga agaacccgct
    46561 atcaatgcct ttccaactga cgccgaccag agatccgccc cagatcccca cggcgacgaa
    46621 aataaccgtc aacagtggta atgaaataac cccagcccag aaacggggag aaataacccg
    46681 acgcagcgga tccaccgcca tcatctccat actggagagt tgctctgtag cgcgcatcag
    46741 gccgatttct gcggttagcg ccgaaccagc acgcccggca aacaacaacg cggcaaccac
    46801 cggccccagt tcacgcagta gcgataacgc caccagcata cccagactgg tttccgcact
    46861 ataagtggtc agaaccagat aaccttgcag ccccaacacc attccgatga acacgccaga
    46921 aaccacaata atcagcatcg acaggacgcc gacattatag agctggcgca ccagcagcgg
    46981 cgcatgtttg cgaaattccg gtttgccgac cagcgcattg aataacatta acccggcccg
    47041 cccgaacgtt ctcagggttt taatcccttt atgtccgagc gacgccagcg catttaacag
    47101 catgagtggc ttaactccct ggtaaaagat cagcgtgata atcgccggca ggatagcgga
    47161 acggaacagg cccgtcagct atcccgtcca gaaactgacg tacgcgcgga tcaggattcg
    47221 cctgcaacgc ctgggcacag ccatgagcga caattttttt gtccgccagg atccaggcgt
    47281 gatccgcaat acttaacact tccggcacat cgtgagaaac caccacacaa gtcacgccca
    47341 gcgcgctgtt cagctcagaa atcagcttca ccagtacgcc catggtgatg ggatcttgcc
    47401 caacaaaagg ttcatcaaac atgatgagat ccggctccag cgcaatcgca cgcgccagcg
    47461 ctgcacgccg cgccatccca ccggaaagtt cagaaggcat tagtttagcc gctccacgca
    47521 gccccacggc ctccagcttc atcatcaccg tactatgcaa caatggcgcg ggaagttggg
    47581 tatgttcgcg cagtggatag gcgacgttgt caaatacgtt catatcagtg aacaacgccc
    47641 cggactgaaa taacatgctc atccgtttgc gcactgtata caggcgcgaa cgagacatcg
    47701 ccggaatatt ctcaccatcg aaaaggatct caccatgatc tggtgcgatt tgcccgccaa
    47761 tcagacggag tagcgtcgtt ttaccgatgc ccgatggccc catgatcgcc gtgatcttcc
    47821 ctcgcggcac ggtcagggaa atattatcga agatgcagcg attgccacgc gtaaaactga
    47881 catcgcgcat atcgactaaa ttcgccacag actgctccat aattcaccct tcgtcttgcg
    47941 ttgattttct aagcatggcg ctcaatttaa ccttgaaccc aacatattta cagaatatta
    48001 cccgctgtgg ttagcgaaag ctggcatttg ttttactttt tagccgcata aagtcaaaat
    48061 taagaatccg ttacggcttt ctgaaaatct tcagcggacc ggcgagtata cctgaagaaa
    48121 ggacgttaga tgcttttagc tacggcactg ttaattgttg gtttactttt ggtcgtttac
    48181 agtgccgacc gcctggtttt tgccgcgtct attctttgcc gaacctttgg catcccgccg
    48241 ctgatcatcg gcatgacggt ggtcagtatt ggtacatcgt taccagaaat catcgtctcg
    48301 cttgccgcgt ctctgcacga acaacgcgat ttagccgttg gtacagccct cggctcaaac
    48361 attatcaata ttttgctgat cctcggtctg gctgcgctgg ttcgtccttt taccgtccat
    48421 tccgatgttc tgcgtcgtga attaccctta atgttgttgg tcagcgtagt ggccggttcc
    48481 gtactctatg acggacaact tagtcgcagc gatggtatct ttctcctctt tctggctgtg
    48541 ctatggctgc tgttcattgt taaacttgca cgtcaggctg aacgtcaggg gactgacagc
    48601 ctgaccagag agcagcttgc agagctgccg cgtgacggcg gattgcccgt cgcgttttta
    48661 tggctcggca ttgcgcttat catcatgcca gtggccacgc ggatggtggt tgataacgcc
    48721 acggtgctgg cgaattactt tgccatcagc gagttgacga tgggtctgac ggcaattgct
    48781 atcggaacca gcctgccgga actggcaacc gcaatagcgg gggttcgcaa aggtgaaaac
    48841 gacattgctg tcggaaatat cattggcgca aacattttta atattgtcat cgtgttgggt
    48901 ttacccgcgc tgataacacc aggagagatt gatccattgg cgtacagtcg tgactacagc
    48961 gtgatgttgc tggtgagcat tatttttgcg ttgctgtgct ggcggcgctc cccgcaaccg
    49021 ggccgtggtg taggggtatt attaactggc ggatttatcg tatggctggc gatgttgtac
    49081 tggttatcgc caatactcgt tgaataactg gaaacgcatt atgtcgcacg tagagttaca
    49141 accgggtttt gactttcagc aagcaggtaa agaagtcctg gcgattgaac gtgaatgcct
    49201 ggcggagctt gatcaataca tcaatcagaa tttcacgctt gcctgtgaaa agatgttctg
    49261 gtgtaaaggg aaagttgtcg tcatggggat ggggaaatcg gggcacatcg ggcgcaaaat
    49321 ggccgcaacg tttgccagca ccggtacacc ttcatttttc gtccatcctg gtgaagccgc
    49381 gcatggtgat ttaggcatgg tcaccccaca ggatgtggtg attgctatct ctaactcagg
    49441 tgaatccagc gaaatcacgg ccttaattcc agtgcttaag cgtcttcacg taccgttaat
    49501 ctgcatcacc ggtcgcccgg agagcagcat ggcgcgcgcc gcagatgtgc atctgtgtgt
    49561 taaagtagcg aaagaagcct gtccgttagg gctggcaccg accagcagca ccaccgccac
    49621 gctggttatg ggcgatgccc tcgctgtcgc gctgttaaaa gcacgcggct ttactgctga
    49681 agattttgcg ctctcacacc caggcggcgc actgggtcgt aaacttctgc tgcgcgtaaa
    49741 cgatattatg catacgggcg atgagatccc gcatgttaag aaaacggcca gtctgcgtga
    49801 cgcattgctg gaagttaccc gcaaaaatct tggtatgact gtcatttgcg atgacaatat
    49861 gatgattgaa ggcatcttta ccgacggtga tttacgccgt gtcttcgata tgggagtgga
    49921 tgttcgtcag ttaagtattg ccgatgtgat gacgccgggg ggaatacgcg tgcgccctgg
    49981 cattctggcc gttgaggcac tgaacttaat gcagtcccgc catatcacct ccgtgatggt
    50041 tgccgatggc gaccatttac tcggtgtgtt acatatgcat gatttactgc gtgcaggcgt
    50101 agtgtaaaga ttcaaggata aacaacaatg agcaaagcag gtgcgtcgct tgcgacctgt
    50161 tacggccctg tcagcgccga cgttatagca aaagcagaga acattcgtct gctgatcctc
    50221 gacgttgatg gcgtactgtc agatggcctg atttatatgg gcaataacgg cgaagagctg
    50281 aaagcgttca atgttcgtga cggttatggc attcgttgtg cgctcacctc tgatattgaa
    50341 gtcgctatca ttaccgggcg aaaggctaaa ctggtagaag atcgttgtgc cacattgggg
    50401 atcactcact tgtatcaggg gcagtcaaac aaactgatcg cctttagcga actgctggaa
    50461 aaactggcga ttgccccgga aaatgtggct tatgtcggcg atgatctcat cgactggccg
    50521 gtaatggaaa aagtgggttt aagcgtcgcc gtggccgatg ctcatccact gttgatcccg
    50581 cgcgccgatt atgtgacgcg cattgctggc ggtcgtggcg cagtgcgaga agtttgcgac
    50641 ttattactcc tggcgcaggg caaactggat gaagccaaag ggcaatcgat atgagtaaag
    50701 ccagacgttg ggttaccatt gtgctatcac tggcggttct ggtgatgatc ggcattaata
    50761 tggccgaaaa agacgatacc gcccaggtgg tcgtcaacaa caatgatccc acctataaaa
    50821 gcgagcatac ggacacgctc gtctataacc cagaaggggc actaagctat cgattgattg
    50881 ctcaacacgt tgaatattat tccgatcagg ccgtttcgtg gtttacgcag ccggtactta
    50941 ccacgtttga taaggataaa atcccgacat ggtccgtaaa agcagataaa gccaagctga
    51001 ccaatgaccg gatgctctat ttatatggac acgttgaagt caacgcactt gtgccggact
    51061 ctcaacttcg cagaatcacg acggataacg cgcagatcaa tctggtgacg caggatgtta
    51121 cctctgaaga cctcgtcacg ttatacggaa caacatttaa ctccagcggt ctgaaaatgc
    51181 gcggcaactt acgcagcaag aacgccgagc tgattgaaaa ggttagaaca tcctatgaaa
    51241 ttcaaaacaa acaaactcag ccttaatctt gtgcttgcca gctcacttct ggccgccagc
    51301 attccggcat ttgccgtaac cggagacact gatcagccga tccacattga atcggaccag
    51361 caatctcttg atatgcaagg caacgtggtt acctttaccg gtaatgtcat cgtcacccag
    51421 ggcaccatca aaattaatgc cgacaaagtg gtcgttaccc gtccgggcgg cgaacaaggt
    51481 aaagaagtga ttgacggcta cggtaaaccg gcaacgttct accagatgca ggacaacggt
    51541 aaacccgttg aaggtcatgc ttcccagatg cactacgaac tggcaaaaga ttttgtcgtt
    51601 ctgacgggta atgcttatct gcagcaggtc gatagcaaca ttaagggcga taagatcact
    51661 tacctggtga aagagcagaa aatgcaggct ttcagcgaca aaggcaagcg cgtaacaacc
    51721 gttctggtgc cgtcgcagct gcaggacaaa aacaacaaag gccagacccc ggcacagaag
    51781 aagggtaatt aattcgttat ggcaacatta actgcaaaga accttgcaaa agcctataaa
    51841 ggccgtcgcg tggtagaaga cgtcagcctg accgtcaact ccggggaaat tgtcggtctg
    51901 ctggggccaa acggtgccgg taagaccacc actttctata tggttgttgg cattgtgccg
    51961 cgcgatgcgg gcaacatcat tattgatgat gacgatatca gtctgctgcc tctgcatgca
    52021 cgcgcgcgcc gcggtatcgg ctatctgcca caggaagcct ccattttccg tcgcctcagc
    52081 gtttacgata acctgatggc ggtactgcaa attcgtgacg acttgtctgc tgaacaacgt
    52141 gaagaccgcg cgaacgagct gatggaagag tttcacattg agcacctgcg tgacagcatg
    52201 gggcagtcac tctccggggg tgaacgtcgc cgtgtagaaa ttgcccgcgc actggctgcg
    52261 aatccgaaat ttattctact cgacgaaccg tttgccgggg ttgacccgat ctcggttatc
    52321 gacattaaac gcatcattga acacctgcgc gacagcggcc tgggcgtact gatcactgac
    52381 cacaacgtgc gtgaaacact ggcggtttgt gaacgcgctt atatcgtcag tcaggggcat
    52441 ttgattgccc acggcacgcc tacagaaatc ttacaagacg aacacgttaa gcgtgtatac
    52501 cttggggaag acttcagact ctgatagggt agaagtttgc gacgttttag caggagagta
    52561 cgattctgaa catgaagcaa ggtttgcaac tcaggcttag ccaacaactg gcgatgacgc
    52621 cacagcttca acaggcgatt cgtctgttgc agttgtcgac gctggaactt cagcaggagc
    52681 tacagcaggc gctggagagt aatccgctgc ttgagcaaat cgacactcat gaagaaatcg
    52741 acaccagcga aacgcaagac agtgaaacgc tggacaccgc cgacgcgctc gaacaaaaag
    52801 agatgccgga agagctgccg ctcgatgcca gttgggacac catttacacc gctggtacac
    52861 catccggcac cagcggtgac tacattgacg atgagctgcc ggtctatcag ggcgaaacga
    52921 cgcagacctt gcaggattac ctgatgtggc aggtcgagct gacaccgttt tccgacactg
    52981 accgcgctat tgctacctct atcgtcgatg ccgttgatga caccggttat ctgactgtcc
    53041 cgctggaaga tattctcgaa agtatgggcg atgaagagat cgacatcgac gaggttgaag
    53101 ccgtccttaa gcggatccaa cggtttgatc cggtcggtgt agcggcaaaa gatctgcgtg
    53161 actgcctgct aatccaactc tcccaattcg ataaaaccac gccgtggctg gaagaggcca
    53221 gactgatcat tagcgatcat ctcgatctgt tagccaatca cgacttccgc actttaatgc
    53281 gcgtcacgcg tctgaaagaa gatgtgctga aagaagccgt caatctgatc cagtcgctcg
    53341 atccgcgccc cgggcagtcg atccagactg gcgaacctga gtatgtcatt ccagatgtgc
    53401 tggtgcgtaa gcataacggt cactggacgg tagaactcaa cagtgacagc attccgcgtc
    53461 tgcaaatcaa ccagcactac gcctcgatgt gcaataacgc gcgcaacgat ggtgacagcc
    53521 agtttatccg cagcaatctg caggatgcca aatggttgat caagagtctg gaaagccgta
    53581 acgatacgct actgcgcgtg agtcgctgta tcgttgaaca gcagcaagcc ttctttgagc
    53641 aaggtgaaga atatatgaaa ccgatggtac tggccgatat cgcccaggct gtcgaaatgc
    53701 atgaatcgac gatatctcgc gtgaccacgc aaaaatacct gcatagtcca cgaggcattt
    53761 ttgaactgaa gtatttcttt tccagtcacg tcaataccga gggcggcggc gaagcttcct
    53821 ccacggcgat tcgtgcgctg gtgaagaaat taatcgcggc ggaaaaccca gcgaaaccgt
    53881 tgagcgacag caagttaacc tctttgctgt cggaacaagg tatcatggtg gcacgccgca
    53941 ctgttgcgaa gtaccgagag tctttatcca ttccgccgtc aaaccagcgt aaacagctcg
    54001 tttgacccaa ccgataagga agacactatg cagctcaaca ttaccggaaa taacgtcgag
    54061 atcaccgagg cactgcgcga atttgttaga gccaaatttg ccaaacttga gcaatatttt
    54121 gaccgaatca accaggtcta tgttgttctg aaagtggaga aagtcaccca cacctcagat
    54181 gcaacactgc atgtaaacgg tggtgaaatt catgccagcg cggaaggtca ggacatgtac
    54241 gctgccattg atggcttaat tgataagctg gcacgccagt tgaccaaaca taaagataaa
    54301 ctgaaacaac actaattgtc cgggcaatta gcatgtgcat ggcggcctgt tgtgcggcac
    54361 aacgggccat ttgtacggtt aatgctccga gcctgttcca ctgtttgagt gggcaggttc
    54421 ttaggtgaaa ttatgacaaa taatgataca actctacagc ttagcagtgt tcttaacagg
    54481 gaatgtacgc gaagccgcgt tcactgtcag agcaaaaaac gcgccctgga aatcatcagc
    54541 gagctggcgg cgaaacaact tagcctgccg cctcaggtgg tttttgaagc tatcctgacg
    54601 cgggaaaaaa tgggcagtac cggtatcggc aatggtattg ccattccgca tggcaaactg
    54661 gaagaagata ctctgcgcgc cgttggcgtt ttcgttcagc tcgaaacgcc tatagctttc
    54721 gatgccatcg acaaccaacc ggtggactta ctttttgccc tgctggtgcc ggcagaccaa
    54781 actaaaacgc acctgcatac tctgtcgctg gtggcgaaac gtctggcgga caaaaccatc
    54841 tgccgccgtt tacgcgcagc ccagagcgat gaagagctgt atcaaatcat tacggatacc
    54901 gaaggtactc cggatgaagc gtagttattc ggtaatgtct cttttagacg ttgtgaggag
    54961 aaacagtaca tggtactgat gatcgtcagc ggacgttcag gttcaggtaa atctgtcgcc
    55021 ctgcgtgcgc tggaagatat gggtttttac tgcgtggata accttcccgt agtgttgtta
    55081 cccgatctgg ctcgaaccct ggccgatcgc gagatttctg ccgccgtcag cattgatgtt
    55141 cgtaatatgc cggagtcacc agaaatattc gaacaggcga tgagtaacct gcctgacgct
    55201 ttctcaccgc aactcctgtt cctggatgcc gaccgtaata ccttaattcg tcgttacagt
    55261 gacacgcgcc gactgcatcc gctttccagc aaaaacctgt cgctggaaag tgctatcgac
    55321 aaagaaagcg atttgctgga gcctctgcgt tcgcgagcgg atctgattgt cgatacctca
    55381 gaaatgtccg ttcacgagct ggctgaaatg ctgcgtaccc gtctgctggg taaacgtgaa
    55441 cgcgaactga ccatggtctt tgagtctttc ggcttcaaac acggtatccc tatcgatgca
    55501 gattacgtct ttgacgtgcg cttcttgccg aacccgcact gggatccgaa actgcgtcca
    55561 atgacaggtc ttgataaacc tgtcgccgcg ttcctcgacc gccacacaga agtacacaat
    55621 tttatctacc agacgcgaag ctatcttgag ctatggttac ctatgctgga aaccaacaac
    55681 cgtagctact tgacggtcgc cattggttgt accggcggga agcaccgttc ggtgtatatt
    55741 gcagagcaac tggcagacta cttccgctcg cgcggtaaaa acgtccagtc acgccatcgt
    55801 acgctggaaa aacgtaaacc atgaccgtca agcaaactgt tgaaatcaca aacaagctgg
    55861 gcatgcatgc ccggcctgca atgaagctgt ttgaattaat gcagggtttt gacgctgaag
    55921 tgctgttacg taatgacgaa ggcaccgagg ccgaagccaa cagcgttatt gcgctgctga
    55981 tgttggattc tgccaaagga cggcagattg aagttgaagc gaccggccca caggaagagg
    56041 aagcactggc cgccgttatc gccctcttta actctggttt tgatgaagat taatcttcat
    56101 cactttgaca tacaactccc ttcaaactcc ccccgacaat aagaaaatca cgtactgaaa
    56161 tcgttctcaa tcaacgtcat ttgtacattt tgtgcgcttt tcactttcag aagaacctta
    56221 agaaaacctt aagaggcatt gtttaggttt tgtttaagtt aatcgaccat actggagatc
    56281 gtcagaaaat atttccagga gatggcatga ttcgcttatc tgaacaaagt cccctgggca
    56341 ccggaagaca tcggaaatgt tatgcgcatc cggaagatgc ccaacgctgt atcaagattg
    56401 tctaccatcg tggcgatggt ggcgataaag agatccgccg tgagttaaag tactacgcgt
    56461 atcttggtcg ccggttaaaa gactggagtg gaataccgcg ctatcacggt accgttgaga
    56521 cggattgcgg aaccggttat gtctacgatg tgattgcaga ttttgacggc aaaccctcca
    56581 ttacgctgac cgaatttgct gaacaatgcc gttacgaaga agacattgca caactgcgcc
    56641 agctactgaa acagctgaag cgttatttgc aggataaccg tatcgtgacg atgtcgctga
    56701 agccgcagaa tatcctctgt caccacatca gtgagtcaga ggttatcccg gtcgtctgcg
    56761 acaacattgg tgaaagcaca ttgattccac tggcgacctg gtcgaagtgg tgttgtctgc
    56821 gtaagcaaga gcggttatgg aaacgattta tcgcccaacc ggcgctggct attgccctgc
    56881 agaaagatct gcaacctcgt gagagcaaaa cgctggccct cacttcgcgc gaagcttaat
    56941 ccagctggtg ttgttgcata aacggctcac cgcctaactg atacatctgc cgtaaaatcc
    57001 acgcctgacg gctacgcacg tagcccgatg gcgaggagac tttgaaacga agtggattag
    57061 gtaatacagc tgccagtaat gcagcttccg accgggtaag tttgctcgcg ggtttgtgga
    57121 aataacgttg tgccgcagct tcgacgccaa acacaccgtc gccaaattcg gcgatattca
    57181 ggtaaaccgt caggatacgc tttttgctcc agactgtttc tatccccagc gttaatccag
    57241 cttccagccc ttttcgtacc cagctacgcc catcccataa aaagagattt ttggccgtct
    57301 gctgagaaat cgttgaagca ccgcgaatac ggttttcatt gcgctcgttg tgcgccaggg
    57361 ctttctcaat ggaagcgaca tcaaagcccc ggtgctcagg aaatttctga tcttctgcgg
    57421 caatcaccgc cagtcccatc cacggcgaga tttgatccat actgacccag tcagaatgtg
    57481 ccacgtaacg aaaattgcca tgcagccagg cgctgacctg tcgctcgacc attaccgctg
    57541 agaagggaac aggcgcaaca ctaaacaacg cgatgccccc gccccagaaa acggcgagga
    57601 caaccattaa ccgcaaaaga aaacggcgaa cgaaactaaa caccgttaag cggcttttac
    57661 tcattcagcc agaaccagca cgcgggaaac cagcttatca atgccgctcg ccgcttctgc
    57721 aatgttctgc gccagcatat atgctggggt ggtgacaatc ttattgtctt catcaaccac
    57781 gatatcatcg acaggacagg gcacatgctc cgcgcccatc tcttccagca cttctgcggt
    57841 atcgatatca gtaccgatgg tcaaacgcag cgggaaatcg aaaattttcg gcagcatcgc
    57901 cggggcaata cacataaaac caagcggttt tccggcctga tgcatcgctt gtgccagcgc
    57961 ctttaattca cggtcaacgg tgcattcgct accaagagtg gcaaaattgc ttaaattctt
    58021 cgccgcgcca aacccccccg gcacaatcaa cgcatccagt tcagcggcat cggcctgggc
    58081 cagaggacgg atttcaccgc gcgttattcg tgccgcttca atcagcacgt tgcgcgtttc
    58141 cgtcatcgct tcgccagtta aatggttgat aacatcaacc tgctgcttat ccggtgcaaa
    58201 gcagaccgcc tgcgcaccgc tgcgtgaaat agctaacaac gtcaacaccg cttcatgaat
    58261 ttcagaaccg tcatagacgc cgcatccgct cagaattacg ccaattttct tcattgtgat
    58321 catcctttcg caattgactg aaacacatta atttttttaa taaaaatggt acgcatcaca
    58381 catttaactg attcatgtaa caaatcattt aagttttgct atcttaactg cgtgcggcct
    58441 gaaaaacagt gctgtgccct tgtaactcat cataataatt tacggcgcag ccaagatttc
    58501 cctggtgttg gcgcagtatt cgcgcacccc ggtctagccg gggtcatttt ttagtggctt
    58561 ttgccaccca cgctttcagc acttctacgt cgtgacgcca ctcttctttc atctcttcaa
    58621 tccattcacc gacgttatct tcccaggcag gaaggtcagg agactgaatt tgctgaccca
    58681 gctgttgcag atggcgtaac cccactgacc ccgccgcacc tttaatttta tgtccttcct
    58741 caacaatgcc ttttttatcc tgcgccgtca gattcgactc cagcacgctg acatagcccg
    58801 gcatcatctt ctcaaacacc gctaacccgt cggtgatcag cttcggtcct acaagttcga
    58861 gatactgttc cagcatggga atatcgagca atgcttctga tttactgttc tcttctgtcg
    58921 tcaccgtact ctcctcatca tcctgggtat cccagaattt cttgatcatc gcggttagcg
    58981 ccggaaccga aagcggctta ctcagcacat catccattcc agcattgagg tactcttgtt
    59041 tgtctttcag cacgttagcg gttaaggcca ccagcggcgg taaatcctcg cgcggataac
    59101 gcttcgtcag ttcacgagag atatccagcc cggtcatatc tggcaactga atatccagca
    59161 acaccaggtc gtattcgccc ggtttaaaca tctccagcgc cgccttgccg gtcatggcga
    59221 catcaacgct gttacctaat ttttccagca cagaacgcgc aacaatcacg ttcagttcaa
    59281 tgtcttccac cagcagcaca ttcagcgccg gtaaaggcat atcgtcttca tcaaacgcat
    59341 catcgacctc ttctgctacc gacggtgcgt ggatcgtcaa cgtaaaggtt gaacctttgc
    59401 cctgttcgct ggtaaccgta atatcgccgc ccatattttt cgccagacga cgagaaacgg
    59461 ccagaccaat accggtgccg gtggcaggtt taccgccatg actgtctttc acctggtaat
    59521 acatggcgaa aattttatcc agctcatcct gcggaatgcc gataccagag tcttccactt
    59581 caaaatgcag catatcgcct tcatcgtagc gcacgcgcac ggtaacctgg ccttgctggg
    59641 tgaatttgac ggcgttactg atgaggttcc acaggatctg ccgtaaacgc gtcccgtcgg
    59701 taatgacctg atgcggtaat ggcagcgtcg gctccaggtt aaagcgcaat cctttttgtt
    59761 gcgcctgcaa tgcggagaga ttttccagat cggcaaggaa gctggtgaaa tcaaccggtt
    59821 gattatcaag ctggaccttg cgccgttcca tcttatccat gtcgataata tcgttaaaga
    59881 tattccccag cgtgacggcc gaaacatgga tggtcttgag atatttttcc tgctcggcgg
    59941 tgagttcggt atccagcaga atgcggctca gaccgacgat accgttcagc ggtgtacgca
    60001 attcgtgact gatggtggag ataaacgtcg ttttgtcgcg gctggcccgt tcaagcgcat
    60061 cctgataccg cttacgctcg gtaatgtcgc gaccaaagcc catcaaaccg tgacgtttac
    60121 ccacgcggtc gtagtacggc actttacgga tttcaaagca ggctttgcgc ccgtccgggt
    60181 aatccagcca ctgttcatag gtcagtgaca cattatgacg gaacactttt tcatcggttt
    60241 caatgacttt tgcggcggct tccggtgagt aaacatcagc aggtttcagg tgaaccagtt
    60301 gtttttcgct ttttccggtc agcagctcca tcgcgcggtt acagccggaa aactctttat
    60361 cttcgttacg ataaaaaacc aggtcgggtg aagcatcaag gaaggaacgt aagaatgagg
    60421 attgctgctc gagctgaatt tgtgtctctt cgcgctcttt gatttcaatt ttcagttggc
    60481 cgaaggtttc ctgcagttct gcttccgctt tttcacgaac ggcaatttcc tgatttagct
    60541 gggcaatatt atcttttaac tgaacgttga ggctcaaatc gcgctcgcgc atctcctcca
    60601 gtttttgcac cagccgtgac agacgttgtc gtgactcctc cagttgctcg acgaccaccg
    60661 atagaaagta gaccgcccac ggcgtaatca gcaaaccaaa gaagatagaa cgaataacat
    60721 caatgctttc gacctgacca tgcagcacca tggttaccgc catttgtacc acaatggcaa
    60781 gaacgacgag ggccagcgcc agcaacattg agaagcgcac cagacctaac ttcatcatca
    60841 ggtcaacata atactgcgcc agcagacgaa tttgcttcat tagggaattc cttcacgaca
    60901 acctgcccca ataataccca attctgacag ttacgttata aattgtgtga gaaatgcgga
    60961 attcccctca acgacctact ccgttggagg tagccacgga cgtcccagcg ccgatccctg
    61021 tacgccatgt tcattcagat agcgatccag ctcgaccatt cccgtccatc gattttcgca
    61081 ccacagcgga gcaagcagcg tcgggcgacg ggcgctggcg gaaatgcggt ggtagatcac
    61141 ttccggtggc gtatggcgaa tcatttctcc ggcagtgagc gtgtaatcct ccagttcaat
    61201 accgttcaaa cgccccgctt cccaggcttt cgccataatg ctgcctttca caatatgcag
    61261 cggatgcagc tttatgccgt ccacgccggt ttcaaccact cgctccagcg tttgcaaaca
    61321 ttcagcctgc ccttcaccag gcaggccgac aattaagtgg gaacacacct tcagcccgcg
    61381 ctgacgtgcc agctgggttg tacgctgata acaggcaaaa tcatggccgc ggttgatgcg
    61441 atgcagtgtt ttgtcgtggg cggtttgtag ccccagctcc agccacactt cgtaaccctg
    61501 gtccttatat tcgcaaagca gatccagcac cgcatccggc acgcagtccg ggcgggtacc
    61561 aacacacaaa ccgacaatat tggcctggct caccgcctgc tgatacatag aacgcagcac
    61621 ctgaacttcc gcaaaggtgc tagtatacgc ctgaaagtag gccagatagc gtttagcgcg
    61681 gttaactaaa ttcgcctggt gcgccagttg ctcggcaatg gaacgatgct gctgcgcttc
    61741 atcggcaaac gaggcaacat tacagaatgt gcagccacca cgcccgatgg taccgtcacg
    61801 gttagggcag ctaaaaccgc cgtgcagcgt cagcttatgc accttttgcc cataacgacg
    61861 ggtgagatca ccaccaaaca tattgactaa tttctgtaac tgcataatct gatagaccgc
    61921 gccttgaaaa gaggccaaag cctgccattt ttagctcaat tcggcgatga cctggatcaa
    61981 tcgtcccggc ctgcttttat caactgcata atcaatcaaa attaccgaaa tttcatgcat
    62041 aatcacataa atcacttttg cttatcttgt gtcagatttt tttatctcct tatggatttt
    62101 aggcaaaaac agtagcatga aacgtcatta ccaattaagg cagtataaaa tgctggtttt
    62161 ctcgtcagtt caaggtagga taagggttaa cacgccttta tgacagtcag gaattgactg
    62221 tttctctaac gacttccctt ttagccttaa agataaaatt cattttaatt tcagttgctt
    62281 aataaagaat tttgcgctaa agcacatttc tgtaccaata agcttgccat ttgacctgta
    62341 tcagctttcc cgataagttg gaaatccgct ggaagctttc tggatgagca gcctgctcat
    62401 catatttatg cagtaattga gatcccctct tcaccgtatt aaccgatgcg aaaaggacaa
    62461 caagggggcg aatacgaggc gcgcgtatga cacgcaaccc ccgtcgccac gctctttctg
    62521 tgcccgtgcg cagcggttcg gaagtggggt tcccgcagag cctgggggag gttcacgata
    62581 tgttgtacga taaatccctt gagagggata actgtggttt cggcctgatc gcccacatag
    62641 aaggcgaacc tagccacaag gtagtgcgta ctgcaataca cgcactggcc cgcatgcagc
    62701 accgtggcgc gattctcgcc gatggtaaaa ccggtgacgg ttgcggcttg ctgttacaaa
    62761 aaccggatcg cttttttcgc atcgttgcgc aggagcgcgg ctggcgttta gcaaaaaact
    62821 acgctgtcgg gatgctcttc ctgaataaag atcctgaact cgcggctgcc gcacgccgca
    62881 tcgttgaaga agagctgcaa cgcgaaacct tgtcgattgt gggctggcgt gatgtcccca
    62941 ctaacgaagg cgtgctgggt gaaatcgccc tctcctctct gccccgcatt gagcaaattt
    63001 tcgttaacgc tccggcaggc tggcgtccgc gggatatgga gcgccgtctg tttatcgccc
    63061 gccgccgcat tgaaaagcgt ctcgaagccg acaaagactt ctacgtctgt agcctgtcga
    63121 atctggtgaa catctataaa ggtctgtgta tgccggcgga tctgccgcgc ttttatctgg
    63181 atcttgcgga cctgcgtctg gaatcggcca tctgcctgtt ccaccagcgc ttctccacta
    63241 acaccgtacc gcgctggccg ctggcgcagc cgttccgcta cctggcgcat aacggtgaaa
    63301 tcaacaccat caccggtaac cgccaatggg cgcgtgcgcg tacctataaa ttccagacgc
    63361 cgcttatccc tgatctgcac gacgccgcac cgttcgtcaa cgaaaccggc tctgactcca
    63421 gttcgatgga taacatgctg gaactgctgc tggcaggcgg gatggatatc atccgcgcca
    63481 tgcgtctgtt agtgccaccc gcctggcaga acaacccgga tatggacccg gaactgcgtg
    63541 ccttctttga ctttaactcc atgcatatgg agccgtggga tggcccggcg ggcatcgtga
    63601 tgtccgacgg tcgttttgcc gcctgtaacc tcgaccgtaa cggtctgcgt ccggcgcgct
    63661 acgtcatcac caaagataag ctcatcacct gcgcctctga agtcggtatc tgggattacc
    63721 agcctgacga agtggtcgaa aaaggccgcg tcgggccagg cgaactgatg gttatcgaca
    63781 cccgcagtgg gcgtattctg cactcggcag aaaccgatga cgatctgaaa agccgccatc
    63841 catataaaga gtggatggag aaaaacgtcc gcagactggt accgtttgaa gatctgcccg
    63901 atgaagaagt gggtagccgc gaattggacg acgacacgct tgccagctac cagaaacagt
    63961 ttaactacag tgcggaagag ctggactccg taattcgcgt actgggcgaa aacggtcagg
    64021 aagcggtcgg ttcgatgggc gatgataccc cattcgccgt gctctccagt cagccgcgca
    64081 ttatttacga ctacttccgc cagcagtttg cccaggtgac taacccgcca atcgacccgc
    64141 tgcgtgaagc gcatgttatg tcgctcgcca ccagtatcgg tcgtgaaatg aacgtctttt
    64201 gcgaagcaga gggccaggcg caccgtttaa gctttaaatc gccgattctg ctctactccg
    64261 atttcaaaca gctcacgacg atgaaagagg agcactaccg cgcagatacg ctggatatca
    64321 cctttgacgt cactaaaacc acgctcgaag cgacagtcaa agagctgtgc gacaaagccg
    64381 aaaaaatggt acgtagcggc accgtgctgc tggtgctctc cgaccggaat atcgctaaag
    64441 atcgcctgcc ggttccagcc ccgatggcgg ttggcgcgat ccagacccgt ctggtcgatc
    64501 aaagcctgcg ttgcgatgcc aacatcatcg tcgaaaccgc cagcgcccgc gatccgcacc
    64561 acttcgccgt gttgctgggc ttcggcgcga cggctattta tccatacctt gcctatgaaa
    64621 cgctgggccg cctggtagac acccatgcga ttgccaaaga ttatcgtacc gtgatgctca
    64681 actaccgtaa cggcatcaac aaaggcttgt acaaaatcat gtccaaaatg ggcatctcca
    64741 ccatcgcctc ttaccgctgc tcgaaactgt ttgaagcggt cggtctgcac gatgatgtag
    64801 tgggcctgtg cttccagggg gcggtcagcc gcattggtgg ggcgagcttt gaagacttcc
    64861 agcaggatct gctgaacctg tcgaaacgtg cctggctggc gcgtaagccc atcagccagg
    64921 gcggcctgct gaaatacgtc cacggcggcg aataccacgc ttacaacccg gacgtggtgc
    64981 gcacgctgca acaggcggta caaagcggcg agtacagcga ctatcaggaa tacgcgaagc
    65041 tggttaatga gcgtccggca accacgctgc gcgatctgct ggcaattacg ccgggtgaaa
    65101 acgcggtcaa cattgctgat gttgaaccgg caagcgaact gtttaaacgc tttgataccg
    65161 ccgcgatgtc tatcggcgcg ttaagcccgg aagcccacga ggcgctggcg gaagcgatga
    65221 atagcatcgg cggtaactcg aactccggtg aaggcggcga agacccggcg cgctatggca
    65281 ctaacaaagt gtcgcgcatc aagcaggtgg cttctggtcg cttcggcgtt actccggcgt
    65341 atctggtcaa tgccgacgtc attcagatta aagtcgccca gggcgcgaag ccgggcgaag
    65401 gcggtcagtt gccgggcgac aaagtcactc cttacatcgc caaactgcgc tattcggtgc
    65461 ccggagtgac gctgatctcc ccgccgccgc accacgatat ctactctatc gaggacttag
    65521 cgcagctcat tttcgacctc aagcaggtta acccgaaagc gatgatctcc gtgaagctgg
    65581 tttccgaacc gggcgtaggc accatcgcga ctggcgtggc aaaagcttat gccgatttaa
    65641 tcaccatcgc aggctatgac ggtggcaccg gcgcaagccc gctgtcgtca gtgaaatacg
    65701 caggttgccc gtgggagctg gggcttgttg aaacccagca ggcgctggtt gccaatggtc
    65761 tgcgtcataa gatccgtttg caggtcgatg gcggcctgaa aaccggtgtt gatatcatca
    65821 aagcggcgat tctcggcgca gaaagcttcg gcttcggcac tggcccaatg gtcgcgctcg
    65881 gctgtaaata tctgcgtatt tgccacctga acaactgcgc aacgggtgtg gcaactcagg
    65941 atgacaaact gcgtaagaat cactatcacg gcctgccgtt caaggtgacg aattactttg
    66001 agtttatcgc ccgtgaaacc cgcgagctga tggcacagct gggggtaacg cggctggtgg
    66061 atctgattgg tcgcaccgac ctgctgaaag agctggacgg tttcaccgcc aaacagcaga
    66121 aactggcgct gtcgaagctg ctggagaccg ccgaaccgca tccaggtaag gcactctact
    66181 gcaccgaaaa caacccgccg tttgataacg gcctgctgaa cgcgcagttg ctgcaacagg
    66241 cgaaaccgtt tgtcgatgaa cgccagagca aaaccttctg gttcgatatc cgcaataccg
    66301 atcgctccgt gggcgcgtcg ctttcaggct atatcgccca gacgcacggc gatcaggggc
    66361 tggcagccga tcctatcaaa gcgtacttca acggcaccgc aggccagagt ttcggtgtat
    66421 ggaacgcggg cggcgtggaa ctgtacctga ccggggatgc caacgactat gtcggtaaag
    66481 gcatggcggg cggcttaatc gccattcgtc ctccggttgg ttccgccttc cgcagccatg
    66541 aagcaagtat tatcggcaac acctgcctgt atggcgcgac cggtggtcgt ctgtatgccg
    66601 caggccgcgc gggtgaacgt ttcggcgtgc ggaactccgg tgctatcacc gtggtagaag
    66661 gcattggcga caacggctgt gaatatatga cgggcggtat tgtctgtatt ctgggtaaaa
    66721 ccggcgttaa cttcggtgcg ggcatgaccg gcggcttcgc ttacgttctc gatgaaagcg
    66781 gtgatttccg caaacgcgtt aacccggaac tggtcgaggt cttaaacgtt gacgatctgg
    66841 cgatccatga agagcatctg cgcggtctta tcaccgagca tgttcagcat actggctctc
    66901 agcgcggtga agagattctg gcgaactggt caaccttcgc cactaaattt gcgctggtta
    66961 aaccgaagtc cagtgatgta aaagcactgc tgggtcaccg tagtcgtagc gcagcagagt
    67021 tgcgcgtgca ggcgcagtaa ggggtagcaa caatgagtca gaatgtttat caatttatcg
    67081 acctgcagcg cgttgatccg cctaagaaac cgctgaagat ccgcaaaatt gagtttgttg
    67141 aaatttacga gcagttttcc gaaggccagg ccaaagcgca ggctgaccgc tgcctgtcgt
    67201 gcggcaaccc atactgcgag tggaaatgtc cggtacacaa ctacatcccg aactggctga
    67261 agctcgccaa cgaggggcgt atttttgaag cggcggaact gtcgcaccag accaacaccc
    67321 tgccggaagt ttgcggacga gtctgcccgc aagaccgtct gtgcgaaggt tcctgcactc
    67381 tgaacgatga gtttggcgcg gtgaccatcg gcaacattga gcgttatatc aatgataaag
    67441 cgttcgaaat gggctggcgt ccggatatgt ccggcgtgaa gcaaaccggt aaaaaagtgg
    67501 cgattatcgg cgcaggcccg gcaggtctgg cgtgtgcgga tgtcctgacg cgtaacggcg
    67561 taaaagccgt tgtcttcgac cgtcatccag aaattggcgg gctgctgacc ttcggtattc
    67621 cggccttcaa gctggaaaaa gaggtaatga cgcgtcgccg tgaaatcttc accggcatgg
    67681 gtattgaatt caaactcaat accgaagtgg gccgcgacgt gcagctggac gatctgctga
    67741 gtgattacga tgccgtcttc cttggcgtcg ggacttatca gtcaatgcgc ggcgggctgg
    67801 aaaacaaaga cgccgatggc gtgtacgcag cgctgccgtt ccttatcgcc aacaccaaac
    67861 agttaatggg ctttggtgaa acccgcgacg aaccgttcgt cagcatggaa ggcaaacgcg
    67921 tggtggtcct tggcggtggc gacactgcga tggactgcgt gcgtacgtcc gtgcgccagg
    67981 gagcgaagca cgttacctgt gcctatcgtc gtgatgaaga gaacatgccg ggttcccgcc
    68041 gcgaagtgaa aaacgcgcgg gaagaaggcg tagagttcaa attcaacgtc cagccactgg
    68101 ggattgaagt gaacggtaac ggcaaagtca gcggcgtaaa aatggtacgt accgaaatgg
    68161 gcgaaccgga tgccaaaggc cgtcgccgcg cggagatcgt tgcaggttcc gaacatatcg
    68221 ttccggcaga tgcagtgatc atggcgtttg gtttccgtcc acacaacatg gaatggctgg
    68281 caaaacacag cgtcgagctg gattcacaag gccgcatcat cgccccggaa ggcagcgaca
    68341 acgccttcca gaccagcaac ccgaaaatct ttgctggcgg cgatatcgtc cgtggttccg
    68401 atctggtggt aaccgctatt gccgaaggtc gtaaggcggc agacggtatt atgaactggc
    68461 tggaagttta agctctgtcc cagcgccgcc tcctcagaaa agagtcggcg ctgaaattct
    68521 cctttctttc tggaaagcgc ctcgcataat ctgaagaaaa ccaatgtaat acgctcatct
    68581 ggattgttac cggtagatgc ccggcgtata gctgattcca ttattcaacg cagcgccata
    68641 taaagggaca gataatggaa tcgctctcag agagaacctc aacaggctac cagcaaatcc
    68701 acgacggtat tattcacctg gtcgatagcg cccggacgga aacggtacgt agcgttaacg
    68761 cgctgatgac cgcgacatac tgggaaattg gccgacgaat tgtcgaattt gaacaaggtg
    68821 gcgaggcaag ggctgcgtat ggtgcgcagc taatcaagcg actatcaaag gatttaagtc
    68881 taaggtataa gcgtgggttc tctgcaaaaa acttacgcca aatgaggctt ttttacctct
    68941 tttttcaaca tgttgaaatt cgccagacaa tgtctggcga attaacacca ttgggaattc
    69001 cgcagacacc atctgcagaa ttcccatcgg caaagatttg gcagacgctg tctgccaaat
    69061 tgagaggctg tttgatattt ccacagcttt tgtattgcat ctcctatttt cggtttgtat
    69121 attcatgcaa ataaacgaag gaaagttgcc atgatttaca ttgaacagct tgaattaatc
    69181 cataaaagtg gtgatgtgtt gtatccagta aaaataacca gaaaatcatc aggaaaaact
    69241 gccttccatc ttgttccatt cggcttaaat aagactcacg accttctaga ggtggaagat
    69301 gcttcagaag caattcggct ggtgattgat gaacgtcatt ccattcgctg cagtacactt
    69361 acagcaacta ttacgaataa aaagggcaag cgaattaagc ggacaggtat atacagtatc
    69421 aagggtgtta acataaaaga atacaacgtc aggtaatggc acagagcggt ccgtcagttc
    69481 aggtttggct ctgtgccaaa gatgggtcag gtcacacctg atctaataaa tttaagccat
    69541 taaatcagcc ttaaccttca ccaccacctt tttaatctca cccggctcgc cgacaacgca
    69601 tcctggttta tgcggttcac ttggcataaa cacggcgaac attcccggtt ttaagatgat
    69661 ggcttgctcg ttatcaatgg tgctgcaaag ctgataatca tcctcatggt ggaactcttc
    69721 acactggcgc gcagtgcctg ccatgccaaa cagaatccgt tcctcaccgt ttaataacag
    69781 ctggatatca atgtattgct cgtgcaattc cgcttttttc tcgacgggcg attgagtgtt
    69841 aaacgtcatg acattcataa agatattgtc gccctgtaat tcgtaacgac caggcgcttt
    69901 ttcttgcggt ctggcagcta atgccagcgt taacgcgtcc tgtaacgcag gatgtaaccc
    69961 agcagacggt aatgactgta cttcacccat catcataatt tttctccctg ggccaacagc
    70021 gcagccccaa gtaaacctgc atcgtggcgg tagtgcgccg ccagtaaatc aacatgaaat
    70081 gccgctggct cctgcgccag atacgtttcc accaacgcca gatacccttc tgccagacca
    70141 acgctgccac cgaccaccac gcactggcaa tcagttgtgg ctttaatatc agcgatcagc
    70201 cttgccagca catgtgcgga gcggtgaatc agttgctgcg cctgctcgtc gccctgcccg
    70261 gcgcgtgtga aaatagttct cgcatccgcg cccatgagtt caccttgcgc tgccgctgca
    70321 ataccgcgac cagaagcaat cgcttccacg caacctgtgc gtccacagcc gcagactggg
    70381 ccgtgtggat cggcaagcgt atgcccgatg tgccccgcca gaccgccagg gccggtaagc
    70441 agtttaccgc cgctcactac accgccgccg acgccagtgg aaacggtgat aaacaccata
    70501 tcggttatat cgccttccag cgcctgatac tctgcccatg ctgcggcctg cgcgtcgtta
    70561 atggcaatgg tcggcaaatt ggaaagttgt tccagcgttt tgactaacgg aaagtgtagc
    70621 aatccaccaa gattatgcgg attcagcgcc agcaagctgc cgtcgcgaat aattccggtt
    70681 gaagcgatgg caacctgctg cgcatgagct tgcaacgggg cgactaacgc ggctaaggca
    70741 tcacgcaacg cctgcggagt ctggctggct ggtgtcggaa gttctcggcg atcgcggatc
    70801 tgcccgtcag cgccaatcag cgcggcggca agtttagtac cgccgatatc aatcgccaac
    70861 gtggtcatag caccgccttt ttcatcgctg tgttgtacca ctgacaaatg tgttcaagac
    70921 gcgtaatggc agaaccgacc gtcaccgccc acgcgccgtg gcgcatcgca tctgccgcct
    70981 gagcaggcgt gttgtaacgc ccttcggcaa tcacccgaca tccggcgtcg ctcaacgttt
    71041 tcaccagcgc cagatccggc tcttctggcg tttcaggcgt ggtatagcca gaaagcgtag
    71101 tgccaataat ttcggctccc agcttttggc atgccaggcc gtcttccggc gttgagcagt
    71161 cggtcatcgc cagtaaaccg tgatggtgaa tacgtgccag cagcgtttca acaggcaccg
    71221 gacgcgggcg gtcggtgccg tcaatggcga taatgtccgc gcccgcctgc gccagcgcat
    71281 caacatcttc aatataggcc gtgatgcgta ccggagaatc ctccagatcg cgtttcacaa
    71341 ttccaataat cggcacgctc accaccgcac gcgtggcttg cagatttgcc acaccttcaa
    71401 tgcgaatggc aaccgcgccc gcctgttctg ccgctaatgc catggcagcg acgatttcgg
    71461 gtttatcgag cgggctgtcc ggaaccggct ggcaggagac aatcaggcca ccgttagcag
    71521 cgattttttg atccagttgt gcaagtaacg acatacatct tcccttagcg aaaggcccgg
    71581 tacagagacc gggcaacagg attaactttt ggttttgact aaatcgtttt tggcgctgcc
    71641 aaatggcacg gcaccgctaa atggtttgcc gtcgatagcg tcatgagtac gcaatgcttc
    71701 cgggcgcagc caacgctgaa cgcgggaagg catatccaga ccaatcagca ggatcaccac
    71761 aaatgtcaga ctgaacgata gcgatgccag cgcagtaccc agatccagac gttgagcgat
    71821 caacgcgccg atgattgggg ccagtgcgcc gcccaatgcg ccaacgttgt aggtaaagcc
    71881 caggcccgct gcacgctggt cggtatcgaa ataaccgcca atcagtttcg gtaagatccc
    71941 ggcgatccct tgtccaagca tttgctggaa gaacagtaac agaccgagca cccagacgtt
    72001 tgcgccgcca atcgcaaata ccggaataat caacagctgc gaggccaaca ggctacaaac
    72061 gtaggctttg cgggttccca gccagtcacc gaggaagccg ctgacacagc accccaccgc
    72121 agccccaaag ccgctaaaga acagcacatt ggcgacagta tgcgggttat aagccagatc
    72181 ggttttcaga tacgttggca gcagcgcctg aatcggccat gagtagagga aagcaaacaa
    72241 cacgaccacc atcagcatta cgcccgttgg ccagcgttta cccgtacttt gcaccataaa
    72301 gctgataaag attgcggcgc ataacagccc aagaacagcg acgatcgcgg cattttgcag
    72361 gttaccggcg aagcaaaacc acagcgcagt agccgccgcc agtgtcatta cgatattggc
    72421 aatgcgatgt tcaccacggt agagaatatc taccatcgtg cgtactggtg ctttacctgc
    72481 atgcttctct ttccagtctt ccgcttccgg gatgttttta cgcagccaga gagcaaagat
    72541 gataggcaaa atgccgataa agaacagcgc acgccagccc cagaccggaa ccaccaggct
    72601 atagacctga gcggcaacga cggcccccac agagaagcct gaaatcagaa aaccactggc
    72661 tttgttacgc agatgttttg gccagctttc aatgacatag gtggcgctgg aaccgtattc
    72721 acccgccatc cccatgccga tgaccagacg cgcgataaac atggtgatgt agcctggcgc
    72781 aaagccgcag gccagcgtcc cggccgagaa gagaacgatg ctggtgacca ttgccagacg
    72841 acgcccgtag cggtcaccca tagcgccgag catcaggccg ccgaaccagc gagagataaa
    72901 ggctgcggag atcagacttg ccgcctgcac cgtcgtcagc ccgaattcac cctgtacttc
    72961 ggtgagtacc agggcgatta aaacgaaatc aaaaccgtca agcagatatc ccaaccaggc
    73021 agcggaaaat gcgcgccatt gtgcacggtt gagatggcga taccacggga tattctgggt
    73081 tgtagtactc attgtgagtc tcccgcggtg ggcgatgccc acacgctttg gtataaaaat
    73141 tgtagggtac agatgcgttt atttcccctc acccggtagg ggcgagcgag gggaaacaac
    73201 tcacccgcgc tcttgcatca actgctgggc cagcgccttc agttctggca gatatttttc
    73261 atctaccggt ccaaacggtt tgcggcacag cggcacagaa acgacatcca tataatggag
    73321 gacagttttc aggccgcgga atacgcccgt tttgatcagt aaatcaatga ctttattgca
    73381 ttcagtttgc agtttctgcg cggtctggat atcgccttct ttcagcgcct taacgatccc
    73441 ctgatagcgc cagcccatga tgttgtaggt actaccgata ccaccatcag cgcccgccag
    73501 cagaccagag gcgaagattt cgtcgtaacc gttatagagc acaagatcag gatgttcacg
    73561 acggatctgc tccatctgat agagatcgcc agaggtctgt ttcagcgcac ctacgccagg
    73621 caatgtaaca agtgtgttga tctgatccag ggtcagtttt accccactca gggctggaat
    73681 gttgtacacc accatcggca aaccatccgc cgaatcaata attgcccgat agtgatcgca
    73741 gtgttcttca aagctgaaag gatagtagaa cggcgtgacg gcggagacgg catcgaagcc
    73801 ataacgttta gccgatgccg caagttgttg gctttcggcg gtgctgacgc aaccgacgtg
    73861 ggcgatgagt ttaatcttac ctttcgcctc ttcggcgacg atttccagta cctgttcacg
    73921 ctcggaaagg ctttgtacaa aggcctcgcc ggtcgaacca cccacgtata aaccgtcgat
    73981 gccctgctga atattgaact gaaccaggcg acgcagactc gctttatcca gtgcttgttg
    74041 ttggtcaaaa ggagtcagga gtgcagccat tacgccacgt aaattcgttg ccataaatac
    74101 ctctgaagtg atgcttgtct gataaacgat atacctttat acctgttata ccagatcgat
    74161 taagcaacac cccatacaga aagcttataa tgcgatctgc ttcactaaag tggcattatt
    74221 tctttttgtt ggtggtctga ccgaaagcgt gccaggtagc agagacgctg ttgagatgcg
    74281 attgcaacgc acgatcggct tcgtcaggat catgacggcg gatcgcatca acgatcgcaa
    74341 tatgctgttg ataactaacg ttgttatgtt cgtgcagtgc ctgatcggta accgttgggc
    74401 gtgcggcaat aagccagtcg agcagggcaa cgtggatcgc catgaagatt gggttaccgg
    74461 ggatctccgc cagcacgcgg tggaaatcaa cgtctgaacg aatgaatgcc gcgttgttat
    74521 ccagcgactg actgttgatt tccagtgctt ttgccagcaa atcgatttgc tcatcggtgg
    74581 catgttcagc cgcatagcgc accagactgg attcaaagaa cagacgtaat tgttcgaaat
    74641 gggcaatccc accgggatga gaaaggaaat ctttcgccat gccggaaagc tcaccgatga
    74701 tagtgtccgc agaaggacgc gagacgcgag cgcgttcgcc gttgtttatt tgcaccagac
    74761 ctttgcgttt taacgctgcc agcgcttcac gcaccgaagg acgcccgacg ttaaagaacg
    74821 ccatcagttc gcgttcagac ggtaattgtt caccttcgcc aaattcacga cggcggatca
    74881 tctgttccag ctcttcttcc accatttcgg agagtttttt acgcgccagc gggcggctac
    74941 gcaagttgcg accaattgca ggtgaagaat cttcggtttg cgaatcaaat gcgttcataa
    75001 ggcccattct gtaaggtcag tgtgattaac atcatcagtg acatcctatc acaggattga
    75061 gagtagggga aaatggcagg tttttctctt tgtgcctcat cattaccata attaacggaa
    75121 taattaacta ttgcgaaaaa ttaatgtaac gcagataaaa acatcccgtt tgaattattt
    75181 ataagactat tcacgagcat tatgaatatt atgaatgcgt tcttgcaaaa taatcataag
    75241 cgcatatttt ttaatgaaaa attatctcac ctacaattaa aaacacgaca tccgcaccat
    75301 aaatagactt gcaaaaaata taacatcatt gttttcaatc tgccgtttat gggattgacc
    75361 gttttctttt gacacggagt tcaacaatgt tcggcataat tatatctgtc atcgtattaa
    75421 ttacgatggg ctatttgatc ctgaaaaact acaaacctca ggtggtgctg gctgccgcag
    75481 gtatcttcct gatgatgtgc ggtgtctggt tagggttcgg tggtgtactc gagcccgcca
    75541 aaagcagcgg ctacttgatc gtcgatattt ataatgaaat cctgcgcatg ctgtccaacc
    75601 gcattgccgg attggggcta tcgattatgg cggtgggcgg tatgcccgct acatggagcg
    75661 cataggggcc agtcgcgcga tggtgagctt gttaagccgc ccgttaaaac tcattcgctc
    75721 accgtatatt attctgtcgg caacttacgt catcggtcaa atcatggcgc agtttattac
    75781 cagcgcctcc ggtctgggta tgttgctgat ggtcacctta tttccgacac tggtgagtct
    75841 gggagtaagt cgtctctctg cggtggcggt tatcgcaacc acaatgtcca ttgagtgggg
    75901 aattctggaa acgaactcca tttttgcagc ccaggtcgcg ggaatgaaaa ttgccactta
    75961 cttcttccac taccagcttc cggtcgcctc ttgcgtcatt atctcggtgg cgatctccca
    76021 ctttttcgtg caacgcgctt ttgacaaaaa agataaaaat atcaatcacg aacaagcaga
    76081 gcaaaaagct ctcgataatg tcccgccgct ctattacgcc attttacctg tgatgccgtt
    76141 aatcctgatg ctcggctcgc tgttcctcgc ccacgtcggg ctgatgcagt cagaactgca
    76201 tctggtggtg gtgatgttac tgagtttgac ggtgacgatg tttgttgagt tcttccgcaa
    76261 gcataacttg cgcgaaacaa tggacgatgt gcaggcgttt tttgacggca tgggtacgca
    76321 gtttgccaac gtggtaacgc tggtggtcgc gggtgaaata tttgcgaaag gcttaacgac
    76381 gattggcact gtcgatgcgg ttatcagggg tgcggagcat tctggtctgg gcggtattgg
    76441 cgtgatgatt attatggcgc tggtcattgc catttgtgcc attgtgatgg gctctggcaa
    76501 tgcgccgttt atgtcatttg ccagtcttat tccgaatatc gcagccggac tacatgtacc
    76561 agcggttgta atgattatgc cgatgcattt tgccacgacg ctagcgcgcg cggtttcgcc
    76621 gattactgcg gtggtggtcg ttacgtcagg aattgcaggc gtttcgcctt ttgcggtggt
    76681 gaagcgaaca gcgatcccca tggcagtcgg tttcgtggtg aatatgattg ccacaatcac
    76741 gctattttat taagccatta aaagacaaaa caggccacca gggcctgttt ttgtattact
    76801 tcacaacgcg taatgccggt cgaccaccgc gtggtggctg cggaggttca tcgtcaggat
    76861 gagtgtcatc atcgtgatct ggcttgtcgc catcaataac cgacataacg gtttcgttgt
    76921 ctgccgatgc ctcttcatca ttcatgatgc tggtatcttc atcgtaggca gcttcaggct
    76981 caaacattgt gcctgcgcca ttttcacggg cgtagatagc cagcacggca gccagcggca
    77041 cagaaacctg acgcggaatg ccgccaaagc gcgcgttaaa gcgcacctca tcattcgcca
    77101 gttccagatt gccgacagca cgcggcgcaa tgttgagtac gatttgcccg tcacgcgcat
    77161 attccatagg aacctgcacg ccagggagcg tcacatccac cactaggtgc ggcgtgagct
    77221 ggttatccag caaccactca tagaatgcac gcagcagata gggacgacgt ggtgttagct
    77281 gtgacaaatc catacagatt aactccggcc cagacgcatt tcacgttctg cttcagttaa
    77341 agaagcaagg aaagagtcac gctcaaagac gcgggtcata tagcctttca gctctttcgc
    77401 acccgggccg ctgaactcga tgcccagttg cggcagacgc cacagcagcg gagcaagata
    77461 gcaatcgacc aggctgaact catcgctcag gaagtacggc ttctgaccga agaccggcgc
    77521 aatcgccagc agttcttcgc gcagttgctt acgtgcggca tctgcttcag aagctgaacc
    77581 gttgatgatg gtgttcatca gcgtgtacca gtctttttcg atgcgatgca tgtacagacg
    77641 gctttcaccg cgagctaccg ggtaaacagg catcagtggc ggatgcggga aacgctcatc
    77701 cagatattcc ataatgatgc gagattccca cagggtcagc tcacgatcca ccagggtcgg
    77761 aacgctctga ttcgggttga ggtcaatcag atcctgaggc ggattgtcct tttccacgtg
    77821 ttcgatctcg aaacttacac ctttctcagc cagcacaatg cggacctgat ggctatagat
    77881 gtcagtagga ccggaaaaca gcgtcattac cgaacgtttg ttggcagcga cagccatgaa
    77941 aacctccagg tatagtcaga atttttactg ctaccagcca ccaggtggcc agtcagaagt
    78001 tgtgttaccc agtaaggaac gactctcttt gttcgaaaat caaacaaaaa atgagcaata
    78061 cccgacattt gggcagaaaa ttggatgata gtttaccaga ttttgcgacc tttgtggtga
    78121 gtcgatgccg gaaatgggga aaaagagatg cgctttagtc tgaaatagtt gacttagtcc
    78181 cttattggcg atgtggtttt tgttttacct gtctgtcagg tggcagcaaa aagcaacttt
    78241 ccagttttta cgctgattca gattttagct ataaaaaaac ccgccgaagc gggttttttc
    78301 gaaaattgtt ttctgccgga gcagaagcca attaacgttt ggagaactgc ggacgacgac
    78361 gtgctttacg cagaccgact ttcttacgtt caacctgacg agcgtcacga gtaacgaagc
    78421 cagctttacg cagttcagaa cgcagggact cgtcgtattc catcagagcg cgggtgatac
    78481 cgtgacggat cgcaccagcc tgaccagaga taccaccacc tttaacggtg atgtacaggt
    78541 ccagtttctc aaccatgtcg accagttcca gcggctgacg aactaccatg cgggcagttt
    78601 cacgaccgaa gtactgttcc agagaacgtt ggttgattac gattttaccg ttgcccggtt
    78661 tgatgaaaac gcgagctgcg gaacttttgc ggcgaccagt gccgtagtat tgattttcag
    78721 ccattgccta taatcccgat tagatgtcaa gaacttgcgg ttgctgtgcc gcgtggttgt
    78781 gctcgttacc cgcgtaaact ttcagtttac ggaacatagc acgacccagc gggccttttg
    78841 gcaacatgcc tttaaccgcg atttcaatca cacgctcagg acggcgagca atcatctctt
    78901 caaaggtcgc ttgtttgata ccaccgatgt ggccggtgtg gtgatagtac actttgtcag
    78961 tacacttgtt gccggttaca gcaactttgt cagcgttcag aacgatgatg taatcaccgg
    79021 tatctacgtg cggagtgtat tccgctttgt gcttaccgcg caggcgacga gccagttcag
    79081 tagccagacg gcccagagtt ttaccggtcg cgtcaacaac ataccagtcg cgttttacgg
    79141 tttctggttt agctgtaaaa gttttcatta aaagcttacc caataaatag ttacacgttg
    79201 gtgaacaccc aaacgtcttc aattgttgag gttcacacga caaagtccgg caaacctacc
    79261 ccttcgaata gcctatgcca gcacacaaaa agttttggga aaaaactttc ttgtaacgtg
    79321 gggtcgcagg attatagaga agtcggggtc aaagatcgac ccctttttgt gatttgtgac
    79381 aggttttaac ccgccaaatg ctcgcgcttc agatactctt cgctttgcat ctcttgcaga
    79441 cgtgacaggc aacgctggaa ctcaaacttc agccgatcgc cctgataaat ttcatacagc
    79501 ggcacttctg cactcaccac taatttgaca tggcgctcgt aaaactcatc caccagcgca
    79561 ataaagcgcc gcgcttcgct ctccatcaac cgcgtcataa ctggtacatc aaacaacatg
    79621 accgtatgaa agaggcgtga gagcgcaata tagtcatgct ggctgcgggc atcgacacac
    79681 aaggtggtaa aagagacagc aagcgtctga ttctcagcgc ccattgtcgc cagcggtcga
    79741 tggttgattt ctaacgtcgg tgaattttcg cgtttcgctc ccgccagcgc caaccatagt
    79801 ttatccattt gtgcccgggt ttcatcgtgg agtggcgaaa gccacagatg cgcctgagtg
    79861 agtgtacgca gtcgataatc aacaccagcg tccacgttca ttacatcaca atgctgttta
    79921 atggcatcga ttgcaggcag aaaacgcgca cgttgcaagc catttcgata aagttcgtcc
    79981 ggcggaatat ttgacgttgc taccagggta ataccgcggg cgaacagggc tttcatcaga
    80041 ccgccaagta gcatggcgtc ggtaatatca gaaacaaaaa attcgtcaaa acagagcacg
    80101 tcagtttcgg ctttaaagcg atcggcaata atttccagcg gatcggtctg cccctgtaag
    80161 gcagttagct cttcgtgcac ccgcagcata aaacggtgaa agtgcaggcg ctgtttccgc
    80221 tctcccggca ggctttgata gaaaaggtcc atcagccagg ttttcccgcg tcctacaccg
    80281 ccccacatat ataagccacg cactggcgta tgctttgtgt cttcgcgttt accccacagc
    80341 ttaccgaccc gcgccattag cccactcgtc ctgggggctg gtggcctgct attgatgagt
    80401 tcttgataaa taatttccag gcggctgacg gcctcttttt gaacgtcgtc gggttgatgg
    80461 ctgccttcat tgagcgcctt caggtattgc gatgttgggg taacgctttg catgatctta
    80521 ttattattcc ttgaataatc ggtgcgccgt tgttcacggt tgacgaaaaa aaggccgttc
    80581 tacactacgc gatatgcagt cgggattcca cttctgtgga attaacggtt atagtggcat
    80641 aatcagccgt aggcatggag cctgaagcca acaccctacg gaaacaaaag acaacgggag
    80701 atgttcatga cctgggaata tgcgctaatt gggttagtcg tcggcatcat tattggtgct
    80761 gtggccatgc gttttggtaa tcgtaaacta cgccagcaac aggcgttgca gtacgaactg
    80821 gaaaagaata aagctgaact ggacgagtat cgcgaagagc tggttagcca ctttgcccgc
    80881 agcgcggaat tactggatac catggcgcac gactatcgcc agctgtatca gcacatggcg
    80941 aaaagctcca gcagcctgct gccggaactg tctgctgaag caaacccgtt ccgtaatcgt
    81001 ctggcagagt ctgaagccag caacgatcag gcaccggtgc agatgcctcg cgactattct
    81061 gaaggtgcat ccggcctgct gcgtactggc gcgaagcgcg actaatttat ttttcgggcg
    81121 cagccattgc gccctcctct tctctccctc cccgactatc atttaatctg gtgtctcatt
    81181 gttagccgtc tgaaaattca ataacatcaa actgttttga atctcttttc ttatcattca
    81241 ggtacgagag caggaataat gaaaaaacaa acccagctgt tgagtgcatt agcgttaagt
    81301 gtcgggttaa ctctctcggc gtcatttcag gccgtcgcgt cgattccagg ccaggttgcc
    81361 gatcaggccc ctctccccag tctggctcca atgctggaaa aagtgcttcc ggcagtggtg
    81421 agcgtacggg tggaaggaac ggccagtcag ggacagaaaa tcccggaaga attcaaaaag
    81481 ttttttggtg atgatttacc ggatcaacct gcacaaccct tcgaaggttt aggttccggt
    81541 gtcatcatca acgccagtaa aggctatgtg ctgaccaaca accatgtgat taatcaggca
    81601 cagaaaatca gtattcagct caatgatggg cgcgagtttg atgcaaaact gattggtagc
    81661 gatgaccaga gcgatatcgc cctgttacaa attcaaaacc cgagcaaatt aacgcaaatc
    81721 gctattgccg actccgataa attgcgcgtc ggtgattttg ccgtagcggt cggtaaccca
    81781 tttggccttg ggcaaaccgc cacctctggc attgtttccg cattaggccg cagcgggttg
    81841 aatcttgaag gtctggaaaa ctttatccag acagatgctt ccattaaccg cggtaactcc
    81901 ggcggtgcac tattaaacct taacggtgag ttaattggca tcaacactgc aatccttgcg
    81961 cctggcggcg ggagcgtcgg gattggattt gccatcccca gtaatatggc gcgaacactg
    82021 gcgcagcagc ttatcgactt tggtgaaatc aaacgcggtt tgttaggcat caaaggcacc
    82081 gagatgagtg ccgatatcgc caaagccttc aaccttgacg tgcagcgtgg cgcgtttgtc
    82141 agcgaagtgt tgccaggttc tggctcggca aaagcgggcg tcaaagcggg cgatattatt
    82201 accagcctca acggcaaacc gctgaatagc tttgctgagt tgcgctctcg tatcgcgact
    82261 acagagccgg gcacgaaagt gaagcttggc ctgctgcgta acggcaaacc actggaagta
    82321 gaagtgacgc ttgataccag cacctcttcg tcggccagcg ctgaaatgat cacgccagcg
    82381 ctggaaggtg caacgttgag cgatggtcag ctaaaagatt gcggcaaagg tattaagatc
    82441 gatgaagttg tcaaaggaag cccagctgct caggcaggct tgcaaaaaga cgatgtgatc
    82501 attggcgtca accgcgatcg ggtgaactcg attgctgaaa tgcgtaaagt gctggcggca
    82561 aaaccggcca tcatcgccct gcaaattgta cgcggcaatg aaagcatcta tctgctgatg
    82621 cgttaatgtc gtaaaccggg catcaggctt acgtgtgatg tccggttaac tcgtggtatg
    82681 ctgctgccgt tccctttttt aatgacgcct ccatcatgtt tgtgaagctc ttacgttccg
    82741 ttgcgattgg attaattgtc ggcgctattc tgctggttgc catgccttcg ctgcgcagcc
    82801 ttaacccgct ttccactccg caatttgaca gtaccgatga gacgcctgcc agctataatc
    82861 tggcggttcg ccgcgccgcg ccagcggtgg ttaacgttta caaccgtggt gtgaacacca
    82921 actctcacaa ccagcttgag atccgcaccc tgggatccgg tgtaatcatg gatcaacgcg
    82981 gttatatcat caccaataaa cacgtcatca acgacgccga tcagatcatc gtcgccttac
    83041 aggatggacg tgtatttgaa gcattgctgg tgggatctga ctctctaacc gatctggcgg
    83101 tacttaaaat taatgccact ggcggtttac ctaccattcc aattaatgca cgtcgcgtac
    83161 cgcacattgg cgacgtagta ctggcgatcg gtaacccgta caacctcggg cagaccatta
    83221 cccaagggat tattagtgcc acggggcgaa tcggtctgaa ccctaccggg cggcaaaact
    83281 tcctacaaac cgatgcttcc attaaccacg gtaactctgg cggcgcgctg gtgaactcgc
    83341 tgggagaact gatgggcatt aacacgctgt cgtttgataa gagtaacgat ggcgaaacgc
    83401 cggaaggtat cggctttgcg attcctttcc agttagcaac caaaattatg gataagctga
    83461 tccgcgatgg gcgcgtgatc cgcggctaca ttggcattgg tggacgtgag atcgcaccac
    83521 tgcacgcgca gagcggtggt atagatcaac tgcaagggat cgtggttaat gaagtgtcac
    83581 ctgacggccc ggcggcgaat gcgggtattc aggtcaacga tctgattatt tcggtggata
    83641 acaaaccggc catctctgct ctggagacga tggatcaggt ggcagaaatt cgccctggtt
    83701 cggtgatccc ggttgtagtg atgcgtgatg ataagcagtt aacgctgcag gtcaccattc
    83761 aggaatatcc ggcaaccaat taagtcgagt gctcaaaaca aaaaaccgga gtctgtgctc
    83821 cggtttttta ttattcgcta atcaattact tattaacgaa ctcttcgccc agggcgatat
    83881 ctttcttgag cgtatccagc ataccttcca gcgcgttctg ttcaaatgcg ctcagggtac
    83941 cgatagattt acgctcttcc acgccgtttt tacccagcag cagcggttga gagaagaaac
    84001 gggcgtactg accgtcgcct tcaacgtagg cacattcgac aacgccttgt tcgccctgca
    84061 gtgcacgaac cagagacaga ccaaaacgtg cagctgcctg gcccatagac agggttgcag
    84121 acccgccacc ggctttcgct tcaaccacct cagtacccgc gttctggata cgtttggtca
    84181 gatcagccac ttcctgctcg gtaaaactaa cgccaggaac ctgtgacagc agcggcagaa
    84241 tggtaacacc agagtgaccg ccaataaccg gcacttcaac ttcgcctggc tgtttgcctt
    84301 tcagttccgc aacaaaggtg ttggaacgaa tgatatccag cgtggtaacg ccgaacagtt
    84361 tgtttttgtc ataaacaccg gcttttttca gcacttcagc agcaattgca actgtggtgt
    84421 taaccgggtt agtgataata ccaatgcacg ctttcgggca ggttttcgca acttgctgta
    84481 ccaggttttt cacgatgccg gcgttaacgt taaacaggtc ggaacgatcc atacccggtt
    84541 tacgcgctac acctgcagag ataagaacga catctgcgcc ttccagcgcc ggagtcgcat
    84601 cttcaccaga aaaacctttg attttcacag cagtagggat atggctcaga tcgacagcca
    84661 caccgggagt cactggagcg atatcataca gagagagttc tgaacctgaa ggcagttggg
    84721 tttttaacag tagtgcaagc gcctggccaa taccgccagc agcgccgagg actgcgactt
    84781 tcatcctaaa ctccttatta tattgataaa ctaagatatg ttgctccgct gccgcgacct
    84841 taatccacaa aattgccgtt tacaatgacc acatatcaag aatgtgtagt cacgcaagtt
    84901 tagcgtttat gcatttaatt gccgtaatca ggaacctaac ttacgtaatt aacagtcgct
    84961 tatgcattag cgcaacattc caacaggtgg tgacaatata ccctaccgtt cagccaaaac
    85021 aacatcaatt tgataacaat taatttactt ttaagcagaa tttgcatgcc gtgacgcagg
    85081 catgtttctc aataacgaaa tttgataaaa tcccgctctt tcataacatt atttcagcct
    85141 tcttcagggt tgactgtttg cataaaaatt catctgtatg cacaataatg ttgtatcaac
    85201 caccatatcg ggtgacttat gcgaagctcg gctaagcaag aagaactagt taaagcattt
    85261 aaagcattac ttaaagaaga gaaatttagc tcccagggcg aaatcgtcgc cgcgttgcag
    85321 gagcaaggct ttgacaatat taatcagtct aaagtctcgc ggatgttgac caagtttggt
    85381 gctgtacgta cacgcaatgc caaaatggaa atggtttact gcctgccagc tgaactgggt
    85441 gtaccaacca cctccagtcc attgaagaat ctggtgctgg atatcgacta caacgatgca
    85501 gttgtcgtga ttcataccag ccctggcgcg gcgcagttaa ttgctcgcct gctggactca
    85561 ctgggcaaag cagaaggtat tctgggcacc atcgctggcg atgacaccat ctttaccacc
    85621 cctgctaacg gtttcaccgt caaagacctg tacgaagcga ttttagagct gttcgaccag
    85681 gagctttaat ctctgccccg tcgcttctgg cggcggggaa aatgttgctt atccctctca
    85741 accccctgct ttcccctgcg attaatttaa cgaatagtgc gttttactgc gacatgtcat
    85801 tcacataatg aatacatacg gtaaaaaaag cacattatgc aaaattcatt atctaattga
    85861 aaatactaga attaaaaata aatgaccgtg tttttaattc ttttttgtta ttaaaattca
    85921 catttttaac acttagtatc aactgaaaca gttagcgtgg tattaattag ttcaataatt
    85981 agtgtatgct tgattttgtg atatgggtca caaaacaaag gcccagctaa aagattatgt
    86041 cgaggtaaaa atcatgaaaa tcaaaaccac tgtagctgca ttaagcgtac tttctgttct
    86101 ctctttcggt gcattcgctg ccgactccat tgatgctgca caagcacaaa atcgtgaagc
    86161 aatcgggacc gtatccgtaa gtggtgtggc gtcttcgcca atggatatgc gtgaaatgct
    86221 gaacaaaaaa gcggaagaga aaggcgcaac ggcctaccag attactgaag ctcgtagcgg
    86281 tgacacctgg cacgctacgg ctgaactgta caaataaacc ctcatcgtct tgtccgacga
    86341 tattgccccc ggttcggggg ctttttttgc gctaatgacg aacattaaaa cgcaaatgcc
    86401 cttccagctc ttcctctgcc tcatcaaaca gcaatattaa cgcgccaaaa cggcgacgcg
    86461 ttttctctcc cagatgaaca aattcaatct caagtggtag cggcaggaca tcgttcatta
    86521 acacatccca tagtgagtcg agatcgcgta ccttatcttt cgccagacca aaggtttggc
    86581 taaagtcacg ataaaaatcc tcctgactct caatctcatc aaaatcaaag gtataaatat
    86641 tcatctattg ccaccgtcac gtttcgcggc gagttctgcc gtgcatcgct aagtatagcc
    86701 atgaaaaaac cgacactttt ggcgtcggtt ttgacctaac tatcggtcaa cgcatgttga
    86761 tacttatgga gcatacccgc cagccgatga accggttccg tcacctgcgg tggcgcttgc
    86821 cagatgcgta gcttttcctg gtagatttca agttcttcca gcaactggcc aaagtaccga
    86881 cgacgtttat catcgctacg ggcagatatc acatggtctg ctgtgcggcg catttgtcgg
    86941 tgaaacgccg ataaatcctc gttaaccggg atcggcgcat cacgcaggcg ctggtgcgcg
    87001 ataatcatcg tcagcgccag gcgaaatttc ggcaaatccc ctgggaactt attcatcagc
    87061 aaaaacagct gctgataaag tgccgggagg tggttctctt tacgacgtgc cacattggta
    87121 gtcatcgcgg aaacagcggc agaaacaaac tgattaagca gtacacgttc ggtcctgtcg
    87181 cgcgatttat cccgcacaag caaaataacg gtgaacgcga gcacacagcc gacgatttgc
    87241 cctaatgcgc tgtcgagaaa ctgactgaaa tggaaagtca tcgggttatc cagcacgata
    87301 atatttatgg tgctggccag cgcccccatc gagcccagtc gccgttgctg tacttctata
    87361 ccgaggaaaa atcccagcac tgccaggcta atacacagca gcaacatgct ctgttgggta
    87421 ttagggataa tcaccaaaaa gtagagcagc cctaacggca gcgcggccag cgtcccgtag
    87481 ataaagtcga tcgccaccat gcgtggattc ggcaaacgca ttgccagtga cgtcactacc
    87541 gcaatcatca ccattgcacc actgccggaa gtccagcccg tccacagcca gaaaagcgtg
    87601 cccagaatgc aggaaagtgt ggttcgccag aagttaacca tcgcatgatg acgttcggct
    87661 gactctactt tgacttccgg ttcgccttgc aggatctctt cttcggtggc gttgattttt
    87721 gtgttactga taacgccgcg cttgagaagc tgataacgcg ttgccgccgc gacccagcta
    87781 taaatggtga caggcgtttc ccgttccccg gtccaggcga taactctccg caggcgtttg
    87841 agctgcttgt ggacgtcctg cgcggtttct accggcgtgt caaaaaattc gcggaaagta
    87901 tcagtgatca attccgggcg cgtattctga ataagataag tttcgcagga ttgggtaatc
    87961 agcgtcagcg atagcgtatt gatcgctttt aaacgtcgat tggcccgcgc ccagcgggaa
    88021 gattccatat tcaggttgct gcgcatgcct tgtagcgccg tggtgcgtcg caccaggtcg
    88081 ccccaggctt tatcgacaac ttcaccatcg ccatgcttga tacagagttg cattaattga
    88141 tattgcgcga ccagcaaact ttccagctct cgatccactt cttgtttgat cgatcgcgga
    88201 gaaaagagca aatccgctat aatcgcacac acaataccga taacgatctc gctacaacgt
    88261 tcgacggcaa actgcggcgt aagcaatggt tccggctgaa tggtgatcac aatgatcagc
    88321 gcggtataac cggccagccc ccacgcgtac gagttttcta ttcgtaccag cgaggatatc
    88381 caggtacaaa aaccggccca gatacagcac accagaatca tcaataatgg tgcgcggatc
    88441 atcgcaatga tgatcaccag tccggcaata cagccaataa atgtgccgat gatgcgcaaa
    88501 aagccacgat aacgaatagc gccagaatac ggttcacctc ccgcagcaaa ggccggaccg
    88561 gcggcaacaa tcgccgctgt cagtaccgcc cagcgtggcg tttccagctg gaagtgaaag
    88621 ccaacaaaca gcgccagtac aatggcggtc gccagtttta ccgcaaagcg aatatgttgg
    88681 ttagcaatgg agaaaatacc catcgtgatt aaccaaactc acgcaggcga tgggccattt
    88741 tacggaagaa cgaatcctgg ctttcgtcgc gatcttgttt gccagtgacc accactgtag
    88801 cagtggtgcc cgcaggccag atgttctctt gctggttgtc gagacgaata cgaaccggaa
    88861 cacgttgcgc aagacgcacc cattcaaggt tagagtctat agtcgccatc cctttgtcgt
    88921 cacgcgtgct gctggcgttg gtgacccctg cggcaacact atcaacagtc cctttcagca
    88981 ctttgttact gccaagcggc gtgatctctg cacgataccc cggacgcacc ccttccagct
    89041 tagtttcttc catataggcc agtacataga aggagttctg tttcaccagc gcaaccgccg
    89101 ttgatcctcg agtaataaac tcaccggtat agacgttgag gttggtcacc cagccatctg
    89161 ctggcgcgcg gatcaccgtg cgttcaagat ccagttttgc cagatcgcgg gtcgcctgcg
    89221 ctttcgctaa ctgatgcaga accgtttgta gtacgttgtt agcctagtcg atctcttcgc
    89281 gagacatcgc ctgcacaccg agacggttac gacgtccggc ctcctggcgt ttctcctgtg
    89341 ccagtacctg ataataagca acatcggctt gcgcttcctc aagcgccttt tgatagcgcg
    89401 gctggtcgat ggtgaacagt atctgtcctt ttttcaccag ctggttatca tgaacattca
    89461 cctgggtaat gagtccagaa acgtccggcg cgatcgcaat gacgtcagcg ctaaagcgcg
    89521 cgtcacgcgt ccagggggat tcggtgtaat agacccaggc attaaaaatt gcgatgaagg
    89581 ccagaatgac taatacgacc gtgatggccg tacgggagaa ttttcttatt agtgttttca
    89641 cttcaacctc aaacgaacag tcgcgatatc aaataaaaca agcagcaata gagcgcggtg
    89701 ttgaacaacg ccggatgcca gacaaagtcg tagatacctg ttggcacaag tacccggcgc
    89761 accagccaga aaatcgccag tgataaaagc aattcaaaaa atatcggtgg gaaggacagc
    89821 ccaaacacca cgataacggg aaacagactc atgttgacct tggttgtata gagagagcag
    89881 gcgttattat tttcagcatc tgtcgccgca gagaagggca tggaaagccg ggcgagagca
    89941 acattgctgt agattgatat ttaatatatt agcgtaactg ttatgctgtt atcta
//
LOCUS       DADMIB010000002        80658 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.002, whole genome shotgun sequence.
ACCESSION   DADMIB010000002 DADMIB010000000
VERSION     DADMIB010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 80658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 80658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..80658
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.002"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..376
                     /locus_tag="JNZ89_000095"
     CDS             <1..376
                     /locus_tag="JNZ89_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8934087.1"
                     /translation="AGTVSQPGRNVRAKSGLNRTILDQGWYEMRRQLEYKQLWRGGQV
                     LAVPPAYTSQRCACCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLAC
                     GEMVQSGRSLKQEPTEMIQATA"
     gene            complement(361..588)
                     /locus_tag="JNZ89_000096"
     CDS             complement(361..588)
                     /locus_tag="JNZ89_000096"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934088.1"
                     /translation="MSHVNPSKTQYRLMLAIASAIPTSLNPPTGYPAVVDDCFQYYGE
                     DILSQSKALKQLFDILHALKDVDSCYVQAVA"
     gene            complement(605..796)
                     /locus_tag="JNZ89_000097"
     CDS             complement(605..796)
                     /locus_tag="JNZ89_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001350911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934089.1"
                     /translation="MESIKWPVCGCPARVEEPVTATLYMPKAVRDWLAMVGNGKVSAG
                     LRKLIEMADIPELKNAWRQ"
     gene            1156..2853
                     /locus_tag="JNZ89_000098"
     CDS             1156..2853
                     /locus_tag="JNZ89_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001038836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid protein"
                     /protein_id="HAY8934090.1"
                     /translation="MNKNIQPARDREREIMNRAASVMAMTVDPTTDAAGNMIADQAVM
                     MENLDKAIQKVPMFEGVNPEVARQITGGWAMSLHEYKRQHGHYPASDILANAHMALER
                     LMTECASDTHEGTGKAMFESVAQSMRSSDGVMKVAQYAALILPASLGAATSDACTFVP
                     CDRDESNIYELVNVAGTKFGTFNQGDELNMQSAGVYSQMKRLYALSTKGDGSTKTFQF
                     NIQQFEGQSCPLRAGYNKLLINRKPSKVDDGDGNLYFNAKDSKGNTFSATAKVAYDTG
                     VIDITFTQAPPVGTEIAVQVEINIERNPSLIPVINQAMRKYEVRPSQYVLASEHTVMS
                     ASDLSREHGLELAALQFSAMRNWISHETDIMRLRTLVFHTVYGREFDVALPEAQNYES
                     WVGLLRHAVNALSQEMANRTLTTGIRGGFAGSDAANFLRSLPPQHFQIAPGYVQSPYV
                     QYIGTLFGTIRIYEVPQPVCEQFLAQGYDFGLDDIFFYGRGEGIGKAGLIAGDAVPAI
                     PYVHETNPSLVNRTTLWGSAINEVHPRNGENYFTRLRLTRAKEGAIDMLTGKVNEKK"
     gene            3001..3279
                     /locus_tag="JNZ89_000099"
     CDS             3001..3279
                     /locus_tag="JNZ89_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934091.1"
                     /translation="MSNIQVTITPPDATDKSFTVESDHPDIVQVDGTTCTALKAGQAV
                     LTIKTNDGNKTAQCTVTVREAHKSVTAVSVEPTTKEVTVGDNFTVSES"
     gene            3347..5005
                     /locus_tag="JNZ89_000100"
     CDS             3347..5005
                     /locus_tag="JNZ89_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8934092.1"
                     /translation="MNKISFSVGQAAGVVVMSVNADANLTNTSGGASVFAGLVISRRG
                     APGKVLKVDDTTYQSVLGSPIHPRLGAAFEPYRHVERAVKGGSGYVVRVCAKDMKVPG
                     ISVSVVGKAKAAKASKELSVEPTETTANPGDTLSVGVAPTATTQSVTFTPKETPQIKG
                     GEKALFFIKDGDASQNRTLSLTRDDEESELFTLTLKEKQTDGSIEVLESHQVSFNPEG
                     TNDMGQPAWIPTLLESQSTRIGAVLADNAEASAAQLIFEDVAFEGGTDGNLSEIAAAD
                     YLEALKVLEASEVNYTALLSLGCYDASALAAIKKLAEDVRVDMFYDLKGNQTPENAIS
                     EAKSHNFGGSHQPSRYYFPLSCRDTFTGMNVVYGISCDAFVAKAKGVALVPDVGGWHY
                     APAGISRAIIDRQNIARIPNIGAVDREAFVLARINPVSVAADGSVYIDDSLTTYSKNN
                     YLRFQHVSSLMNAIARDFYEVAQAIKHEPDGITKEALMKAMTELLDRYVAAGALVTPR
                     DKSQGEDPYVVQVVQKDIDLWEVSWSVCPTGTARRIVGKPILMR"
     gene            5049..5783
                     /locus_tag="JNZ89_000101"
     CDS             5049..5783
                     /locus_tag="JNZ89_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934093.1"
                     /translation="MKNYTADPFMRAIFGSGCFESGDKSTQDNNDNAMLESAGQKGKD
                     TQPKPKDDIETAMMEAVESRAQGDMRSLAASMLAGWVEDGDPEADSFDALAITMAGLA
                     DIDEGTDFTDEQIDAYNDALAALADAAVALGADQDDVTEMIDDEDDSAAERVFDALSE
                     SDTDMMETAIAIYTVAGGDSAMLEAVRKKVVRDGKVTIIRKRPRPRRMTSLQKQALKK
                     ARRKAHTSVANINRKKSMRIRKKRGL"
     gene            5851..6423
                     /locus_tag="JNZ89_000102"
     CDS             5851..6423
                     /locus_tag="JNZ89_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934094.1"
                     /translation="MPDGISPLMKVYILSSEDMVVGYIGEGSTAELSSMWQSPFENQS
                     VGGLLGGISAAAGSLADTLQTATGVTTKTLFNSMLVWEGQQPPEFNLVIDFMATTNAQ
                     LEVNAAITALLKMESPELNNVAPFGRRPETVTLNIGRNIALTDVVIKSVSYQLDAPRT
                     PEGYFTHNTVTLQCSGNTSINRSNISSVFV"
     gene            6432..6923
                     /locus_tag="JNZ89_000103"
     CDS             6432..6923
                     /locus_tag="JNZ89_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000012433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate protein"
                     /protein_id="HAY8934095.1"
                     /translation="MSGFANTKADMAFLKSRFNKNLAAGEKLIGSEYWMTIKGYEHLS
                     VLVRSTQLPEMTREDVEDYAPGGMKFNQHGPLRNSGEFQVTCAETIEGAVLAAVKQMV
                     YGKEYLEITLQAAAESNSGNHKGLIRTYSHCKVYSDAVDFSSEDVTAVVKPSLRIVYN
                     WVE"
     gene            6976..7527
                     /locus_tag="JNZ89_000104"
     CDS             6976..7527
                     /locus_tag="JNZ89_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000187854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934096.1"
                     /translation="MTPTELLESVKARFNPLLVREEETLKAFLIKALTTYQDRAGVVK
                     TLKLEKAGGTAIPLPEDYLSLVHVTDNNGLLVYSDELSGFIELELTGSERWPFRMLYL
                     VNLRDRKLDEWQVPPAIIGMLEEYLEALINVRNVARQRRASIDGKFDYSDLPDEATLY
                     ARVQEIEEKMSSNRAIIPGATIF"
     gene            7543..8250
                     /locus_tag="JNZ89_000105"
     CDS             7543..8250
                     /locus_tag="JNZ89_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000021876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8934097.1"
                     /translation="MSIFSSVGRTLTTALSFNTKSFTSNLISDILDKAISGGGVSGNY
                     SSDIAYGKNIVAAAMRIRYAQGWQWTVEVDGLNGFDMFVKDITYSSGNIETESKVIGS
                     VEFSKPTYVSAGPVTMTVRDTEDGKIMDWFKERRSRVTNPDGTINLPPEYLMKIRVYR
                     VTQDGGKELEEEMRVFPTQLGEITRSRDQVSEFLSYPITFQKYTSAGSGVSALVNGAA
                     GMATSALKGAVSGVIKF"
     gene            complement(8632..9387)
                     /locus_tag="JNZ89_000106"
     CDS             complement(8632..9387)
                     /locus_tag="JNZ89_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001077897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepB family plasmid replication initiator
                     protein"
                     /protein_id="HAY8934098.1"
                     /translation="MNRAELTAKAVSLIESATPISRSLAQANEITEAAYHLTRDQKRL
                     LFIVVGRLRYASKDGVLGSGACELTVNEYAEMYNLPSAEASKDIRKAISGLSEKKVTI
                     YNPDESTESEDSYESYPWMIKDAYSPRRGTYIIHLNPYLMPFFTLLDKRFTRLNFTEV
                     SRLTNPYSMRLYESLCQYRKDDGSGFAILGVEWMRERYGLPKSYQRYAEFKRSFLTKA
                     VAEIEKNTKMKIVFSEVTEGGKVTRIKFTYQQS"
     gene            9776..10597
                     /locus_tag="JNZ89_000107"
     CDS             9776..10597
                     /locus_tag="JNZ89_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934099.1"
                     /translation="MNIPKFPLPSRPETEIQFHAPTVKDALKYSDLNPAEDEATTTEY
                     LNSMQDGEINDSANWTVQDRRTALWWIFVNSRPDAVMTYSYECSHCGNTHHADINLSD
                     LAQTVEILTVPPYVKTNVPVNGVPTDWILKPLTGKGAELLERMRASLPDMKSPEYSAG
                     VARMRIAELALCTALKDDPEDFTQAANRRFDIIESMALETEFTPLVARIQLMQKDLRH
                     GLKMSIERGSSRLILPPQHCKNAKEGADVTTTLYVPFLNREFIPSIRSEWMANHY"
     gene            11303..14620
                     /locus_tag="JNZ89_000108"
     CDS             11303..14620
                     /locus_tag="JNZ89_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001350914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase"
                     /protein_id="HAY8934100.1"
                     /translation="MGVDGNQSSSEESLTDAAGVGAGGPLWMAARGMYDITKEITGKA
                     ESLKEWVEKGKGEASPSKATSPAITYPAVVNTQKATSATAFNNAVETKSAQAVEEQTK
                     ILQTNDNKIIDGLENVSDEVVKLRKSVSSGNKFGLSDLWRNRASRRNKINIGDQAGKN
                     KRNKPKRKGRNLGKKALSVGEKAAAGTAAAGAAKTVKTKVSKAKDISTTSDASKGIAK
                     ETKNTAKAVKPAGVVAEEATVKTGETVAKKKTESVALKSAAKIGVKSAASTAARAIPI
                     IGSLAMAGYDAIDGYTDTDAQKAAFGLSDDDAVSEQQKTAYATANVLDMGGLVSGATN
                     LIGKGISALGFERAGEKLQNFDTGDIARGVNGAVDVTKSVFGSLKDTFLSTDENTKQV
                     KKAVEDGTKKTVDAIHSLGEQLQGGRNGEDGVGEHGYTSPTEFSSPANNTIAADLNIG
                     GSNAKNRNYRNNNLGNLVFANQEGATLESPNAKGEQRFARFNTPEEGIRALANQVSSY
                     YNGTSAAAGYQKLQTVSSIISKWAPPNENNTNQYIDNVSKYLGVSPNEKIDVSKPEVM
                     TQLVRAIATKEGGNPAVNNEFIKNALGAFNTNTGRWEGQFSDETLARINKIQKENGGQ
                     LIARDSQYSVGRKVKYANGKSPAQPVLNAVPTATQQPIEVAQHAQAVKKPQKTGNQPQ
                     PINPENADVNTGSPSSLLERLIAINESGISGASNLFGGAATSLAGTSLDLVKDFALAT
                     SFGSISSLSEKAKGMDQALTEKISGLTGKSFGFKKASQVADIATAIQQKRTVNHDTEI
                     IDLLPGDQVSPSTPKTPLQEQALAISQAMEGFSSAAPVPKTPQQEQALAISQAMAGFS
                     SAAPAPKTPQQEQALAINQAMAGAAPVVTSGKRTITAPSDVQIYDNGYKVVTGEDKSF
                     FGSLFDSTVSGLKQTGTAVIPAVGDNLSRLVGGIDSTGILNDLVMQSTGQNSAIARAI
                     SPLTRNVGDWLNGGIQQTANSIRGIATGANNAIFGSASAVQEPFLAMPPQLPTVTDLA
                     RSGIRQPLTTDTINNDPAMLKALDNICSILNDLLNVNKNNTKGDPDNVVKTSQPQPRP
                     RASTTINDQSLDALLED"
     gene            14626..15000
                     /locus_tag="JNZ89_000109"
     CDS             14626..15000
                     /locus_tag="JNZ89_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934101.1"
                     /translation="MLYEIDARLQTNESGVIIAEGSTAAWMARLDEWLRTPEGSVYGL
                     PSWGSPMEEFKHEPFGSETSHIVEVAIEGRMMKKLRQDLPGLDVQGIRCTSISEDSLL
                     ISFYAKGGSMDIVMQKSSGVGA"
     gene            14997..16427
                     /locus_tag="JNZ89_000110"
     CDS             14997..16427
                     /locus_tag="JNZ89_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000156299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate protein"
                     /protein_id="HAY8934102.1"
                     /translation="MTITELLDKFNAKLNENTWWSRFVNSQFVQMHAIFGSQLIYIAR
                     TFASRGLTEGLISTATRRSSILAVAEDRSYVGRFVSASYGTTSITNKTDRDITLPAGA
                     ELLANDQTPLAIINSVVIPAGGTISGVETKQHEAVSITFDIEKETLFLTLLLSRELTK
                     EVSSLDVYVITDGVEEKWTYNPLFRMSRDKSKHYSLAYKPTEQLGVKFGDGSMGMMPP
                     AGCQVRIDVMASLGDYTLAEGQKLEPAGNIAQYVESLEFKTDSIITGGSGMETTEETR
                     NRAQYYVAYDEQVVWGGDYRQFIQNVVHGTSWLNVWGEALQEKITGFDVRNINKIFFC
                     GHKPGVSQAQLKSEILKALENVPNELNKRFEYVDTNEQPFTINFIGIVRKNVLIDDAQ
                     NAIKAALEDNFGRDSSSFSLLLQSDDDSQQCYAQVKVKDIWRVIESLDMFLSYDITIQ
                     NMKDAVYFNDFIYLNVKSSTFSISYP"
     gene            16438..17283
                     /locus_tag="JNZ89_000111"
     CDS             16438..17283
                     /locus_tag="JNZ89_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000654651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8934103.1"
                     /translation="MKDNWLKERLTKVKQDSHLWSAFIDALQDVWNEAVEPILTRISN
                     RKSFFTMDSEDMDARIAEYGRFFVITEKDKDRRPMLLAQRLDEVHFKGTILPIEQTFW
                     REFGCIPVSWEPLYAPVNIEKHPYGSYFATEIEIPTAQAQFGEFFLTSRGLVVVDQNK
                     LYRSYGEQDKEAAVQKLLSDFETVIAPLLPLHIVFDGVSFRLSAVFPEVAEILNCLST
                     DVSVIEGVYVTESMADMLSHSDTSSQVDNISLNAIPNRTAEKQLHLDVTPLDAWPLDY
                     HLQPV"
     gene            17675..17824
                     /locus_tag="JNZ89_000112"
     CDS             17675..17824
                     /locus_tag="JNZ89_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001436272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8934104.1"
                     /translation="MPDNTPYDFNTLVLVDAEEQAFAVLCTQQDTLYKGKRYSILMTI
                     EQVEG"
     gene            17827..22371
                     /locus_tag="JNZ89_000113"
     CDS             17827..22371
                     /locus_tag="JNZ89_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001436273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934105.1"
                     /translation="MGADKTNNIITLSSGVSQPLLADVQYFELYSSSALNRKLKNIVL
                     PGFYCGFEPVPGTGLSVRITSENSEGKGAASVDVNNVQISVQQIEDVTVSVKAGATNI
                     IVLEANFEHGVKTTQVDSASSVSAARIYARRDNTIGQNQIELCRVIVPSGATAVTKEM
                     IVLKYRVNRAVGVEFSNEISSTEERKAATPLAVKTLHDLVDTKAPLNSPHLSGTPTVP
                     TASQGTNSTQIANTAFVKAAIAALINGAPGTLDTLKEIAAAINNDPNFSKTINNALAL
                     KAPLASPALTGIPTAPTAAQGTNNTQIATTAYVRAAISALVGSSPEALDTLNELAAAL
                     GNDPNFATTMTNALAGKQPLDATLTALAALATGANKLPYFTGKDTVAQTDLTSVGRDI
                     LAKTSTLAVIQYLGLRELGTSGEKLPLLSTANTWSARQTFSAGITGTLTGNADTATKL
                     KTARKINGVAFDGSADITLTPEDLGLTDIASQAGNAVQRSGDTMGGQLKIGTINALRI
                     FNQAFGLIFRRSEESLHLIPTNEGEGENGDIGPLRPFSINLRTGLVSIGNGVKVGGGI
                     TGNLTGNADTATKLKTARTIGGVSFDGSANIDLPGVNKTGNQNTTGNAATATKLQTAR
                     TINGVSFDGSKNIELTPRSIGTINSATMSFSGGAGWFKLATVTMPQASSVVYISLIGG
                     AGYNVGSPQQAGISELVLRAGNGNPKGITGALWRRTSVGFTNFAWVNTSGDTYDIYVE
                     IGNYATGVNIQWDYTKDATVQIHTSPTYTANKPTGLTDGTVYVIYSSHIKPTATDVGA
                     LPITGGNLNGGLTATGEIISKSANGLRIAYGNYGFFIRNDGSNTYFMLTDSGNSLGTY
                     NRLRPLIINNANGAVTIGNGLNVTGGINGSLNGNASTATKLQTARNINGVKFDGSGDI
                     NINTLVSRGRVTALSGSTQGTAGIQMYEAYNNSYPTTYGNVLHMKGASAAGEGELLIG
                     WSGTSGAHAPVFIRSRRDNADAAWSEWAQVYTSKDSIPGVNTTGNQNTTGNAASATKL
                     QTARTIGGVSFNGTANIDLPGVNKTGNQSTTGNAATATKLLTARTINGVSFDGSANIS
                     LSPANIGCPASPTGWLVTGDNGASITTEQLVTLLRDNGAFNAKAWIARCAWAYANSAS
                     IPDSETGCGIIPLAGAVIEVFNNGNSSNNYTIRITTATTTGVSGALTNAEFVYVFNGT
                     SYSPGWRRAYNTKNKPTAADVGALPLSGGALTGGLTAAGEIISKSANGLRIAYGNYGF
                     FIRNDGSSTYFMLTDSGDSLGTYNSLRPLTINNANGAVSIGNGLTVYGSVGLGTANAL
                     GGNSIVLGDNDTGFKQNGDGILDVYANSNRVFRFKNDAAFSLKKLLVGDSKTFSLSSA
                     NTSTKNVTFNLWGASTRPVVAELGDDSGWHFYSQRNTDNSITFAVNGQVSPANYGNFD
                     SRYTLKTACVTSVRMGSAASYKPSSNGVSWTQNLGSGLVMTGIIVQETGSNSADNIGG
                     IYYRPVQYCINGTWYTAASV"
     gene            22464..22901
                     /locus_tag="JNZ89_000114"
     CDS             22464..22901
                     /locus_tag="JNZ89_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001434377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8934106.1"
                     /translation="MDENGNDWYECQKLFSECTKVIAYDSNNIVVSITDDASTLWPIG
                     LSVAEVDSLPEDVDIDGGWVFRDNSVVKRIYSDTELQQQAESKKAALLSHAESVIVTL
                     ERAVKLNMATDEERAKLEAWERYSVLVYRVDTAKPEWPEEPLL"
     gene            complement(22933..23166)
                     /locus_tag="JNZ89_000115"
     CDS             complement(22933..23166)
                     /locus_tag="JNZ89_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019076889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8934107.1"
                     /translation="MMWLFPRFIRSFRRHPFNPKQLVISQTKLLRGRILSEDEQSSLD
                     AWLDYIDAVNALDFNTITDKASFNAIVWPTELG"
     gene            complement(23108..23218)
                     /locus_tag="JNZ89_000116"
     CDS             complement(23108..23218)
                     /locus_tag="JNZ89_000116"
                     /inference="COORDINATES: protein motif:HMM:NF014814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8934108.1"
                     /translation="MRRLLEKGIPRKQVAIIYDVAVSTLYKKFPASSFQS"
     gene            complement(23249..23642)
                     /locus_tag="JNZ89_000117"
                     /pseudo
     CDS             complement(23249..23642)
                     /locus_tag="JNZ89_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708399.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            23746..24072
                     /locus_tag="JNZ89_000118"
     CDS             23746..24072
                     /locus_tag="JNZ89_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000457141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY8934109.1"
                     /translation="MFADYENLAVVVITSLLSGTGVFLLGVRDGRISASLLNLASELF
                     TAVTAGLAGYGVAVSQEWPEGIIFCVVLIASNNGREILQGLKSRASNVLNLLSVIANG
                     GKGGEK"
     gene            24072..24518
                     /locus_tag="JNZ89_000119"
     CDS             24072..24518
                     /locus_tag="JNZ89_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000526264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HAY8934110.1"
                     /translation="MGNFGNYFIFIMAFVAIIDRFIFRRKSVEILSIGDAVVKESAIA
                     FPVSLRVKRSWVSNAQIEYWLQDLKNPSVVISGKTRPVDASKRGEREEYLLIDTKYLE
                     PTKWDLKVTLTNGNCRLNPLYRIFPINDCIERQFTIEKREGGWDVK"
     gene            24508..25128
                     /locus_tag="JNZ89_000120"
     CDS             24508..25128
                     /locus_tag="JNZ89_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934111.1"
                     /translation="MSNKNNYVLLNYDELNEKGLAKLVKEISKGGYKIARVIPASNGR
                     KKDGIMTRTFTLIGLDEQTMEVQVNDTGDISGIKLNGKTVPFKPVKTMSALGQSLAAL
                     FNRGATSFQKSLARKLARAAKNIDDENKKRQGVKSNAQKLAEAKESRDALREDIANAN
                     DKLSKLQSKSDKVMQDTGNVKAALSQEVAKTRALKEEIARLEDEHD"
     gene            25121..27046
                     /locus_tag="JNZ89_000121"
     CDS             25121..27046
                     /locus_tag="JNZ89_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000609485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head protein"
                     /protein_id="HAY8934112.1"
                     /translation="MINNPLRINIQSTFADTIPGYMPSRWSSKELSEDDLIFEAATLE
                     DIELAYMGNEILVVSDEAMFESITTTRIRLAQTMRAFVRALNRGLNGTNIMAGTDEAG
                     TDENGRNCIGGAIIGRVRRVANIPVLTAQIPLTDGQSTSIIFHSPTADGAKIKSNDEL
                     VAFQFLLNKRNVTHVVAPIGGRDVSLSQVCQALSNLIERNSEKFKKAKERQDKMKADI
                     ESYLNEADKLAEERSITIDQVDVAQRGLTEKRAALTEMQKKLDAQKAINEELQEKRDK
                     LLSAKGEKTKERAFSDQLRHVKHNLAIDGKTVLDNGAEVNYVTSGSDNFVTIVAPEGK
                     FSIDASAVKGGSLADAATKLLKAYREHNADKYKVDVLPGQQEDSEPPQTAPETNPVSQ
                     PESQDVGKYHYALQSRPAGVGAVPDGNKAVLDRPDQADQYYGYARHGIITYDRKLTDK
                     EVSQYELLYLPDEDELKDFAGQLVVSSMSKHIDGYVDLFGSDLKTFKAQVKILFRKAF
                     PNVAYPLGDGENLFIMDVYNALQNYSSEVKTEHVVEPESQPQPAPEQEPEPEEAGESA
                     SEADQEADKALEYLKSVPEQFTSRDLTVISTELDHVQEAANALISAGRYDENEATVGA
                     AVDYLINILAEIQQGGA"
     gene            27046..27414
                     /locus_tag="JNZ89_000122"
     CDS             27046..27414
                     /locus_tag="JNZ89_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000156173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934113.1"
                     /translation="MTISVLDRLKLGKELSDLMQAQKTAPVLQRVTIGKQIVDVMLKL
                     GLGTAAQPAAEPQQQTDPVVDEVPKIVTDFLGGVFTKSTQMEFIDALRGISNYVGEFL
                     TLEQAKEQTISWVKANGYAG"
     gene            27509..28894
                     /locus_tag="JNZ89_000123"
     CDS             27509..28894
                     /locus_tag="JNZ89_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934114.1"
                     /translation="MNKSVTSALSEAADINSVIALVSSLERKETRMGRSSYVVTSKGA
                     EVKTAFKVVDASSLIISNNLDGTINPAFPEELQPRDRTRLSSKLQVNRIASDLRPAQL
                     TDSGMSSHGAPIVGPDNVVESGNGRSMGIWRAYEQGQADEYRQYLIDHAKEFGLNPDE
                     ISQMSMPVLVRERLTDVDRAQFARDSNISDLQEMAASEKAYADAQFLTESVMALFNPS
                     DDGNLLARSNDAFIRAFLREIGDTATAGLLTADGRPTKQLIDRIQNAIFAKAYKDERL
                     VRLVSEEPDPEMRNILIALNTAASDFAQMQSLSGDAHHDAVTGLVDGIEQVNGLDTQA
                     IAALQEAINLVREAKDNGQAVEEVIAQRGLFGDSTPEAEALALFIVANNRSAKRMGAA
                     FKKMAQKINDELTHKQQALGDMFGGGDVDLRSILSAVSDEIEGEFGEGKGLNFAMFEN
                     STVPNNCRTEN"
     gene            28959..29337
                     /locus_tag="JNZ89_000124"
                     /pseudo
     CDS             28959..29337
                     /locus_tag="JNZ89_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001427840.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="poly(3-hydroxybutyrate) depolymerase"
     gene            29409..30641
                     /locus_tag="JNZ89_000125"
     CDS             29409..30641
                     /locus_tag="JNZ89_000125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HAY8934115.1"
                     /translation="MAIFGVSYVRPYAEQGRGITGIESSYYTLPHFVQEFYRGSQLVG
                     FSGDYILDTHSLRRVITEPWNLVSMKNPYWTPQHKVIPVSYGTKGYSLLSDQADKPLM
                     ETQNYGTSFLEYSYEPYLNLCASLAALKSTRNNAAKIDRLIALTTNTLDPVNAANYTR
                     GVSQALKRHSDLVAQRSINANAIPTVLNHLIPVMGDGKNGITIDTQSIPADISGIEDV
                     MFHLRQLAASLGIDATMLGWADQMSGGLGEGGWQQTAIQAALRANWIRQAAQRTIYRL
                     LDIHLAYKYGKVYTEKNRPYDVQFNSMNTAIQEEENRELDARANFVAVISQIMDQIQN
                     NPKLAGSDAFMRYLFTEQLHIDDDTLNTMIKEFKANESEQNNEHGMYESAPLSSGDDP
                     ENWTPEQLINFAKFVMSN"
     gene            30655..31653
                     /locus_tag="JNZ89_000126"
     CDS             30655..31653
                     /locus_tag="JNZ89_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head processing protein"
                     /protein_id="HAY8934116.1"
                     /translation="MQSLNTVTDRFSLVEKIRKHTPQNNRNYVIQSVRDTFNSPETKE
                     RIALGEMYGYYGHGRRAMHYNKTKSLNLPEVSVVMVDGKPVVLENVPSNRTIDISIDD
                     NGIVTHTQEILDTDTGRIVQGMINSGAGGWSWATSGPDSSVSLVKSFHGFDYVTVPNY
                     ISLDKKSLMLESAEERDAAIHAALIEQGFTDNAATDLVHHFSAMKNQQAIFESAQREA
                     LESELMLLEVENIQLRDKLRTQTAMMESQGENAKQCRRILRDAIQEMPVFISAEQRRA
                     LCRMQSEDDARIVAAMLESLGANATYGLPISGKKEPELSPKESKNTTPLLFVSRRA"
     gene            31854..32816
                     /locus_tag="JNZ89_000127"
     CDS             31854..32816
                     /locus_tag="JNZ89_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001023800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic replication protein"
                     /protein_id="HAY8934117.1"
                     /translation="MNILNSVSVTFNTSEYKNNTEYHKKIKGHQLSFFARHSGLLSPS
                     HSAIIAEFANLAGATDEYMIRRSYADMSEITGRSISTVRRAFAEATKCGMLVRQHQVA
                     NNNAQVCNVYRFTTQFLHFIHVAMETGGKQGIKFANATKLVKQLISKVRYFFETGNPL
                     FILNKSPHVQNEQPIENKSHSIAKRRERSCAVQPKASPADSSQADNGALDKKPVIREE
                     HTNRCLAAAKARAAKRRSDEGHAKRQALYRTAEKLAKKFAWIRSAATAVNKPKQSSAL
                     DFSMDYSGSQGCATIGEAFDLMKQRGYRSEFDREDWSIPAGFRG"
     gene            33230..33454
                     /locus_tag="JNZ89_000128"
     CDS             33230..33454
                     /locus_tag="JNZ89_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000245715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HAY8934118.1"
                     /translation="MVNANPCSRPEFIWRFHSLQKHCDHFAIAATEKEARSLIPDQYG
                     VLTGRFSTSPQPNTNPWYRNITNPSIAEAH"
     gene            complement(33557..34042)
                     /locus_tag="JNZ89_000129"
     CDS             complement(33557..34042)
                     /locus_tag="JNZ89_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HAY8934119.1"
                     /translation="MANIEPRWLIEARRHIGLTEIKGAKHNPEIVQFWRDIKRGGIKD
                     DETPWCAAFVGAMLERVGIRSTRFESAKSYLDWGEKLDTPAYGCIVVFTRVGGGHVGF
                     VVGRRANGDLIVLGGNQGDAVNIRAFPTSRVSGYRWPAGEPRNTALLPVGDAATSTNE
                     A"
     gene            34192..41034
                     /locus_tag="JNZ89_000130"
     CDS             34192..41034
                     /locus_tag="JNZ89_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000359478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HAY8934120.1"
                     /translation="MDKLLHSISEASSLGELIEIVSRLHKLRAVATFGVKKVDGVGIQ
                     KTRRAANNAAVELLNSLPPGFDGAKLTDEQRQILAGYTGEGGLTDGEGSQYEYYTPQF
                     MAEGIWDLFADYGIDGGHVLEPSAGTGIFQETKRQGMIMTSAELSPISGRINQLLHPE
                     DDVNIGAFEALAAKDAMYDHAVGNVPFGEGRSGVAGLDPAYANEKNVGNYFVLRTIDK
                     VKPGGLIVLVVPNGMTDGTKYKKLRDKVSRKAEFLGAHRMPSGTFSESGTDTVVDVWV
                     LRKHPETFLEMIPDTDDSTLKSANVLWDTFLKGKWFTTEGKRFVYGDMERTSFRNTLV
                     VKKDGRVSNESMKTALSRRFDSRINWDLLGVTTQAWQGAKVGDKRLVGGIWHEFDGLK
                     WVKDTTTKSSALDVSRYGVSTFGDLQTTFQSTNGILALSWGQISAIASDYPSVISDEV
                     AAMIRFAGKQREKDRERIMRGALIGQLINKALDKRNLGENVDDELADAARLTAAEVAK
                     YGPPHAIKLNDITEAGAKNWLTFTGNVNQDGEASDLLSGRLDVSKGAAGIDFTRPEQV
                     VTHLFSDVALNPINLDDFREAFKGELPEDDDQALEYLAKFDDIAIDGYGCLLPMGRAT
                     SGDIKSKVALLVGWRDASTGERKANFERQLSKIEEKRTFTPLNKVTVNLNARWLDRRL
                     IKEFLAEQGYDEFKYTEPDLKVEDGILVSPDDYEGKDGVFTGYQLRTVNGKNGNEFKK
                     ANNKDGFLNQLENYLNGVKPRGQNANEYLDKIAQLETSFNDWLRTHPQADQIARDYND
                     AFNGYIPFTHSDAPLGLEGISGKRIPLSYQNEEVRRLSEDGRGIMGFGTGLGKTTTAL
                     ALEAYNFETGRTKRTCIVVPKAVYQNWYHEAQSFYSADAFANMMFIGLDEVRDGDGNI
                     QTAPVLDQDGTPRLDNDGNPITRNVVKESASAVIAQRMNMIPSSNWRTVIMTKEQFAS
                     IPLRDETIGENSQQAVFNAAEMGRLDLASGKHRDAQKKNKIKDQAANTGTAKKQNIPY
                     FEDMNFDSVIADEGHNYRNSFGAGREAGQLAYLPNPAVSKMARDMAVKAAYMMKRHNG
                     RGVVMLTATPLVNSPIDAFNMLSTVIPQHEWMHMGIITPDDFVRVFGKTATVQVQKIS
                     GEVEEKQGLVGFQNLDGLRGIFHRWTTLKTASDVGATVKIPDIVENTLQIPMTPEQQA
                     AYEELRKRAQELSRGDDVTVDDEGNITGGKPDDFIFSIIRDMDKVAIDPDLYASAITF
                     QFPVELTEQVKSIANNLPKVAGGKAADDAEEAEEDATGGLVSTRTSKVVATTFSEHPN
                     HVELRASIDLEAEILKAIADAGIDMKQVSHPIPPKYAALIENLREGLKNGKQIIFIDE
                     KAQHQKLRRIIASALQMPEQEIGIINATTVSQAGGVKLKKVKKPTEPTPNKDGEYKEG
                     AWETYYSKLAQYEDYLSAKNDAGLEGMEGIAADYNEGRTRIIICNKKAEVGINLHIGT
                     TDIHHLTLPWTPASIDQRNGRGARVGSPQEKVNVHYYCGKGTFDDFRLDTLKRKKDWI
                     KMVMTSDMSEIANGDADDADERAIMLAANPEERRAIMARQSKEREERLRLKAQREANN
                     ALDNYLKAANAAGKDIGMMEAELKSAMEQAQRYQSDLDGLIKSGTNKNGQKYTLSALS
                     KAKKRVRELRFAITRAKDADTVMKRSRGDVERAIKSGVLDISIDVIQNPQEYMRTGKN
                     ILLHKGSYYRAVIDAEYETTAIVRVTQIEGEKAQYTCRVAWLDRASRHSRSPGSTMTL
                     PFDSVVEAVTFEEGVAESREIAARGVQSHQLSTSLSRDQFYDAIRSGVMRVTGRDRGG
                     WQGAPDVNYWAYRNANGQIQMAFTYGGMIGQKISASGSDEIAPEQWIYPDVNDEALKR
                     EVAKIQTGDNPLRISEAEGFLRALFGFDYEQGMEAWGAQATMDDVVKAFDGWMAGRDL
                     SGRSLEKVTQEDVRSLFRKPNGEGLETYWRGVLSFRDFQGRMKAFTNGSEISQMFEQL
                     RTSKITTKIEKTRMALNAWRDALFDQYKMQSDADGWASLASLADQSVYSAQLSISNAD
                     NPLETSATVWIKAGALIHAFEDKSITRDDFADADSLNRLVGMAIRHANALKAGGYVEE
                     LPDALKSATWDDFVSLKNSGATESEIAERLAAAKTEREEQADAAENKADEAANDDYII
                     VVNDKPIRAKARVRGRWWSVSEDAGAVYLIADMPGSSSIRNAKDAIKKIGGRFWNFEV
                     NPVADVDFDRPAWMVSTRYSIDEVRKIIEAAA"
     gene            41071..41505
                     /locus_tag="JNZ89_000131"
     CDS             41071..41505
                     /locus_tag="JNZ89_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000209223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="olxA"
                     /protein_id="HAY8934121.1"
                     /translation="MTTLIDTVKPTESYLEDILPQALNGRSEEAFLDAYLNGMVERLK
                     RDPQLYHLYGPWWPALKTLLLERGDISFGQVVDSDVAEIYKMSRPALTVLAGHLYSSD
                     RLENDAVYNPVHALEVALYADDTEPYVYTSYDESIEKYRIVG"
     gene            41508..41747
                     /locus_tag="JNZ89_000132"
     CDS             41508..41747
                     /locus_tag="JNZ89_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001230915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934122.1"
                     /translation="MRKNRRFTIDDLKAYSQGKGYALEYHRYKRVFTLRHIENPSKWG
                     WIYFPHTDDKLVGLVDDLSYEGWMIAIDKAVTGIN"
     gene            42105..42401
                     /locus_tag="JNZ89_000133"
     CDS             42105..42401
                     /locus_tag="JNZ89_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001548246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HAY8934123.1"
                     /translation="MRYVYEHTHSTPNGGLRGKRTAIKMVAEGQKKGYPDLSIDLARG
                     GYHGMRIEMKHGRNRLTPEQLVWMTRLTEAGYYCFEARSADEAIKAITEYVNLD"
     gene            42631..42912
                     /locus_tag="JNZ89_000134"
     CDS             42631..42912
                     /locus_tag="JNZ89_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934124.1"
                     /translation="MSLAFADDAGRTRSITLSTPVKAVTAPLIREALRELELGENSAL
                     LSVSWLGKMSEKQYVDGVTPITVMRLLSLLQWAIVPVFIAYLIYEAATQ"
     gene            43026..44234
                     /locus_tag="JNZ89_000135"
     CDS             43026..44234
                     /locus_tag="JNZ89_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000077917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934125.1"
                     /translation="MSQHTDASNLEIISTAIETLRTQIALIQKRNPGDDLSKRLHESV
                     IATTDNLVAEINKLLDDGAVDYNKLVDQFEEYQQAVNDGLIRFSQVTGVSATVESLGD
                     AVNQFAVNMRNEIGNLEARLEQANTLRKSAEADLNRYKKDYPPSLTKRLDVAEKDNRT
                     LKRERRELKERLTKLNQQCIDYQGEGVTLRKKLATAQSIIETLKRECSQLGHDLNRAC
                     GMGQRPETFPLMYDGRDAIAYIHEYPHGLVAETGQRGEALLTANYHQQIRTNRLLTMD
                     VIPSVWGTPLYYRLPGFEKDWNTDIDECLADKIMAYLETDFPRLYRRIMDSKDAPIDE
                     LKMRPETLEAIKQTEFDTVFSVACIPSCFHESIPFMQGDRRQEIIDACRVWANEWDKK
                     NGGVEDLYGK"
     gene            45459..45533
                     /locus_tag="JNZ89_000136"
     tRNA            45459..45533
                     /locus_tag="JNZ89_000136"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:45491..45493,aa:Asn,seq:gtt)
     gene            45539..45625
                     /locus_tag="JNZ89_000137"
     tRNA            45539..45625
                     /locus_tag="JNZ89_000137"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:45573..45575,aa:Tyr,seq:gta)
     gene            45630..45705
                     /locus_tag="JNZ89_000138"
     tRNA            45630..45705
                     /locus_tag="JNZ89_000138"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:45663..45665,aa:Thr,seq:tgt)
     gene            46411..46497
                     /locus_tag="JNZ89_000139"
     tRNA            46411..46497
                     /locus_tag="JNZ89_000139"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:46443..46445,aa:Ser,seq:tga)
     gene            46978..47805
                     /locus_tag="JNZ89_000140"
     CDS             46978..47805
                     /locus_tag="JNZ89_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000734576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HAY8934126.1"
                     /translation="MKKTLISAAIIFGSLCLTGCDRVEPGNVGIKVNKLGDDKGVGEV
                     VGVGRYWTGWNTEVYIFPTFKQMKTYDDPFSFQMSDGTTIGYHIGVAYKVDPAKVTTV
                     FQTYRKGVDDITDTDLRQKIADALNRLASKMTTDKFIDGGKSELLDAALKDIQEEMTP
                     IGIQVMSLSYVGKPEYPPTVIDSINAKVTANQKTLQREQEVKQREAEANMLRAEAAGQ
                     ADAIRTKAQAEADAIRLRGEALRQNPGVMELEAINKWNGTLPQYMTSNTAVPFVPVK"
     gene            47960..48035
                     /locus_tag="JNZ89_000141"
     tRNA            47960..48035
                     /locus_tag="JNZ89_000141"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:47993..47995,aa:Ile,seq:cat)
     gene            48873..49064
                     /locus_tag="JNZ89_000142"
     CDS             48873..49064
                     /locus_tag="JNZ89_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000488304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934127.1"
                     /translation="MFRGSIGSKEKLFEFLPEEAFDIVEGCDVMVMPRLVMMNGDLQA
                     QTDWFATGVDIIATDWEAF"
     gene            49064..49456
                     /locus_tag="JNZ89_000143"
     CDS             49064..49456
                     /locus_tag="JNZ89_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000274530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934128.1"
                     /translation="MYGTTKLSTQQATNMEWSIANCKIVSCNATRTDVGHKSTITGYL
                     VMTTRGMRVSFRWKAEQVTPFREPSMPLQVEQDYLCLPEIDGGMLVESDGSKADFEAN
                     LKLAQAVINSCRGKWIAKVKHVVRLSRW"
     gene            49565..49957
                     /locus_tag="JNZ89_000144"
     CDS             49565..49957
                     /locus_tag="JNZ89_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000435256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="late promoter activating protein"
                     /protein_id="HAY8934129.1"
                     /translation="MEQISSAEIADIMIRADCYLTVTEITILAKEKYPHLHVSRVSVT
                     NIIRHFVRSSRAICELDDRVYPRKYWLHGLNGYQFKVRGRTPEYGSLLVKNCSRKSVE
                     QARKEQRELVDMANKLWNAAVKKRGVAL"
     gene            50338..51318
                     /locus_tag="JNZ89_000145"
     CDS             50338..51318
                     /locus_tag="JNZ89_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001444356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA pacase A subunit"
                     /protein_id="HAY8934130.1"
                     /translation="MAKMIPEEDKSAPKIEGSSAMIPDGAVQRATLPTTNVARDMMKN
                     GAEEHLRLAIQMAQERALQYQSIVDQEAERLQAEIDTLGDKEPEGMHPGQRLLGLISD
                     AAYYMNDFISRLAAIYQSEQKLRQGDEKLRQSARQQAFKEAEAREKLELARLQAEQRG
                     KEIEYRIGADARAARVIAAAIRMREREELDDIGVAEYIERQGVSVPAILAARAAKAIT
                     LLEPPVSDVNDVDDEQLDKEAREFATLQANHPQWLAERRADVATIVEELGCGDYDRNG
                     ERKAGEFEANDEELDIDPSATAEIYGDYDASDAGYDAGDDDIAIEPPEDD"
     gene            51318..52826
                     /locus_tag="JNZ89_000146"
     CDS             51318..52826
                     /locus_tag="JNZ89_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000897062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HAY8934131.1"
                     /translation="MAGGRKVKCVTRDPRWRDMVIKYRYNFTQAVVDIFGMFPSPQQQ
                     QIIQSVQETGSRTTVTSGHGTGKSSLTAMLLLIFMILFPDARVIIVANKIGQVKTGVF
                     KYVKQYWANAVKRHGWLQTYFVLSDTMFYERSRKGIWEVLCKGYRLGNEEALAGEHAA
                     HLLLILDEASGISDKAIGVMTGALTEEDNRMLMLSQPTRPSGYFYDSHHSRAKTPDNP
                     KGIWTAIVLNSEESPFVTPQFIKEKLLEYGGRDSIEYMVKVLGQFPREINGYLLGRDE
                     CDRSARRKVLLEKNWGWVATADVGNGRDKSVLNICKVSGHRDKRRVVNFKVMEMPGTM
                     DPLAFADFIYNECTPEKYPNITIAVDADGFGSDTCAQLVRRGANPVRIRWGKPMFANK
                     DRERFVNQRAYANIMARDAIKSGRMRIDSDPKTAEQASKIPFLMNEEGKMAMMRKEHM
                     RQKLNIKSPDRWDTYCFTMLVDYVPANEDIGAEMATFRDQVLADIEMPDLDI"
     gene            complement(52854..53093)
                     /locus_tag="JNZ89_000147"
     CDS             complement(52854..53093)
                     /locus_tag="JNZ89_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000888609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934132.1"
                     /translation="MLEDADPAIRHIIERKIRTSREAMARLDKMDLELLDVMMASGDD
                     LTGIKLNEARKKYGKAIEERYGYTFPQTQYAAKLW"
     gene            54288..55316
                     /locus_tag="JNZ89_000148"
     CDS             54288..55316
                     /locus_tag="JNZ89_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001292230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8934133.1"
                     /translation="MSELIISGSSGGFLRNIGKEYQEAAENFMRFMNDQGAYAPNTLR
                     DLRLVFHSWARWCHARQLAWFPISPEMAREYFLQLHDADLASTTIDKHYAMLNMLLSQ
                     CGLPQLSDDKSVSLAMRRIRREAATEKGERTGQAIPLRWDDLKLLDVLLSRSERLVDQ
                     RNRAFLFVAYNTLMRMSEISRIRVGDLDQTGDTVTLHISHTKTITTAAGLDKVLSRRT
                     TAVLNDWLDVSGLREHPDAVLFPPIHRSNKARITTTPLTAPAMEKIFSDAWVLLNKRD
                     AAPNKGRYRTWTGHSARVGAAIDMAEKQVSMVEIMQEGTWKKPETLMRYLRRGGVSVG
                     ANSRLMDS"
     gene            55426..55734
                     /locus_tag="JNZ89_000149"
     CDS             55426..55734
                     /locus_tag="JNZ89_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000349258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934134.1"
                     /translation="MDGYTVTFAAGVKNSHAVVVFGIMTGLEAVPVFTLEKNWRNLEE
                     AESYVRKVTIIAAEKLLAHYQENYRTMVEKINLAFTRPTTGFIAPDTNAGRYPARGRR
                     "
     gene            55731..56207
                     /locus_tag="JNZ89_000150"
     CDS             55731..56207
                     /locus_tag="JNZ89_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934135.1"
                     /translation="MKTYYPSLNCYPSSYPGLSGKLLALLAKAPTEWFKPVVINPHFL
                     DYGSVRTRNELKNLLAHGFIRHRAGKGYQLSIAPEEAVRLFAYRDSQTKARVIAQILH
                     NGSTYARQFGGDTSQFLRAVRSLVEQGVIESSCIPVPTVPHIKRRVYTFTQRAKKQ"
     gene            56204..56698
                     /gene="dut"
                     /locus_tag="JNZ89_000151"
     CDS             56204..56698
                     /gene="dut"
                     /locus_tag="JNZ89_000151"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000640903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HAY8934136.1"
                     /translation="MIYVKVKRLHPAAKLPAYATSGSAAMDFEAVEIKPCVDSNGAIS
                     SSWWVYTGLAMEIPPGWCLKLYPRSGLGCKKHTRLANCVGIIDSDYRGEIMAKLITDP
                     GGEGVCLKPGMAVMQGIFERVEPVSMVEVDELDETERGAGGFGSTSEDRVEIKRTPLQ
                     YAKF"
     gene            56713..57375
                     /locus_tag="JNZ89_000152"
     CDS             56713..57375
                     /locus_tag="JNZ89_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000255077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2829 domain-containing protein"
                     /protein_id="HAY8934137.1"
                     /translation="MVSTFQVFPKYKCHSIIRASKIKDIVIVGKAYAPIFGSIEVVEP
                     KGMTLRVDGVFLEKFRPQIGGYLVTAENGYLVYVPEKAFEKCYSRVNDASENGVSLSI
                     EGHNGVTFITARDVTISAGGIATLQEEIDLEAADFSDALMWLKDGKKVARRGWNGENQ
                     FCWLVPEGQYPARMEAIKGYFPGDLVPYGAYFALKNAQGVVVPWLPSVGDLLACDWFV
                     VE"
     gene            57382..58182
                     /locus_tag="JNZ89_000153"
     CDS             57382..58182
                     /locus_tag="JNZ89_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000432093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934138.1"
                     /translation="MENTKAIQYRLRNGLLVAVNADMSLPFDTIERTIMTYLGFNEEL
                     NEEHGVAIWSDAESGVHRYITARGKDYSLEELFTLAQSFECVALDMFNDPAIAQRLIR
                     ELGLSVTPIIFKNGSLTGTWRVERISNYLPYNRQLNGVISGVNQPVACENVNLVAAVL
                     ATACRVIGLAKQAFIHFPNGAEGSAEIIACDFEFTWMLREYLDQTVFRAEELDMYITS
                     MIPDDVRAEAIATARAKCRAAIAEQAKEEPSDEAVADVEAEVAEDADA"
     gene            complement(58266..58646)
                     /locus_tag="JNZ89_000154"
     CDS             complement(58266..58646)
                     /locus_tag="JNZ89_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001216040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HAY8934139.1"
                     /translation="MRHISPEELIALHDANISRYGGLPGMSDPGRAEAIIGRVQARVA
                     YEEITDLFEVSATYLVATARGHIFNDANKRTALNSALLFLRRNGIQVYDSPVLVELAV
                     GAATGEIPVSSVAEKLRELFGSNI"
     gene            complement(58646..58867)
                     /locus_tag="JNZ89_000155"
     CDS             complement(58646..58867)
                     /locus_tag="JNZ89_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001603498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HAY8934140.1"
                     /translation="MQSINFRTARGNLSEVLNNVEAGEEVEITRRGREPAVIVSKATF
                     EAYKKAALDAEFASLFDTLDSTNKELVNR"
     gene            complement(58940..59329)
                     /locus_tag="JNZ89_000156"
     CDS             complement(58940..59329)
                     /locus_tag="JNZ89_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000506727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein"
                     /protein_id="HAY8934141.1"
                     /translation="MGFPSPAADYAESRISLDQQLIRHPSATYFMRAADSHHREGILQ
                     GALLVVDSSLTPVDGSLLVCAMEGEYRIKRYRKYPRQHLEDLSTGRKEALPVDDDGCT
                     GSNAVFGVITHVINDVRSGEFDDCPVI"
     gene            complement(59428..59679)
                     /locus_tag="JNZ89_000157"
     CDS             complement(59428..59679)
                     /locus_tag="JNZ89_000157"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001286531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HAY8934142.1"
                     /translation="MSDRNIAAKSQEERDKVNVDLAASGVAYKERLNIPVIAEQVARE
                     QPENLRAYFMERLRHYRQLSLQLPKGSDPVYQKEDIAKK"
     gene            59853..60062
                     /locus_tag="JNZ89_000158"
     CDS             59853..60062
                     /locus_tag="JNZ89_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934143.1"
                     /translation="MRFILTLKSETEGIKHSVKVFSEAILLNGKLRHLVRPERQYPDV
                     LAREKDLLSEVQDRVIDFVKCYPLH"
     gene            complement(60047..60331)
                     /locus_tag="JNZ89_000159"
     CDS             complement(60047..60331)
                     /locus_tag="JNZ89_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001142397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin PHD"
                     /protein_id="HAY8934144.1"
                     /translation="MPTKAELQVRVDELEKENASLKKMLSRAERELSGKLLPEELPPA
                     DIPDRVSWWMKYFRAPWEAFWCYDHRRWCDELDSSFPYFAEGNTCPQCRG"
     gene            complement(60315..61016)
                     /locus_tag="JNZ89_000160"
     CDS             complement(60315..61016)
                     /locus_tag="JNZ89_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000208133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934145.1"
                     /translation="MTTITREQALKIIEAADEVISALAGTNEDVHPGSDNMLRLWDDL
                     NDRYAPPEVVRELARIALASLEAEPIGEVSEKRHGLVMDGTVDLGGKSTYRIIKGEKA
                     MKLLPLGTKFYIAPPAPVIQADVAQSIENLKQKLVECNRYNYCADAVKGVEDACRAVM
                     LQSGNFRESDVITPDHHKQAEKSGLERCHLETALNIKPGHTLGIIDALLVHKMARALL
                     PLVAEKHEADHANES"
     gene            complement(61013..61222)
                     /locus_tag="JNZ89_000161"
     CDS             complement(61013..61222)
                     /locus_tag="JNZ89_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000951711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934146.1"
                     /translation="MAIAASYTMHLYCDCRQCTEGVYPVPDFGEYIGTSWAGCAKEAR
                     KDGWRISKDKTRAFAPGHKVLRINK"
     gene            complement(61224..61412)
                     /locus_tag="JNZ89_000162"
     CDS             complement(61224..61412)
                     /locus_tag="JNZ89_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934147.1"
                     /translation="MKNRKAKILLVRRNAPGVWQWVRLSNRRVGLMKHYGMMDCGFCK
                     KPSAAQNRWKNHLRTKGE"
     gene            complement(61585..62031)
                     /locus_tag="JNZ89_000163"
     CDS             complement(61585..62031)
                     /locus_tag="JNZ89_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY8934148.1"
                     /translation="MSKIDYQKLREIAEKTKIAGEAPVMPFDQRINALNDFMKHFSPD
                     IALALLDEWERNQQYIKRRDQENEDIALTVGKLRVELEAEKQRAKDLFMENARLKSGI
                     AGLIHLGIRYADVEVMRIAGDAQLSTPCTDSIINSIATGIRIKGGE"
     gene            complement(62028..62723)
                     /locus_tag="JNZ89_000164"
     CDS             complement(62028..62723)
                     /locus_tag="JNZ89_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY8934149.1"
                     /translation="MTIDYQVLREAAEQATQEEWVAYILPGHNGIYPARTSEGRHCGY
                     FIDWPGIDGQRNAGANARYIAAIPPKVALALLGEIKRLEDTNIDAMCRIAPLETKLAA
                     LVAENAGLKLAMAVTLDHVSVTDAGQAGVAAMIINDALHHSETPATDAFLAEGKTEAR
                     KEGAYFVANRMLAAWKAGFIDDTAKNAADIARMILTSTEFMANAPEGDFDRSFSDGVL
                     EDIAEQLRKGVIQ"
     gene            complement(62720..63364)
                     /locus_tag="JNZ89_000165"
     CDS             complement(62720..63364)
                     /locus_tag="JNZ89_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934150.1"
                     /translation="MNNRFYMMCLRETVGNNASFHRHNGNGYSSDIDRAHVYTLEEAQ
                     KAWNCGRDIDQPVCADSVDAMAVWHVDCQYIPTESLIESDCTAYVAYKKGCWNGNDVY
                     WLQHGGLPTDDFSKATIFSVANKNEPGIVWLPFSIADAAKRRTFNINNFNRRTMVQGA
                     GLIMPDWLKKQNRRKKSRSGKVRWNCPHCGKITWQYSPYDFEGCSDYNCEGWRE"
     gene            complement(63357..63599)
                     /locus_tag="JNZ89_000166"
     CDS             complement(63357..63599)
                     /locus_tag="JNZ89_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005025292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934151.1"
                     /translation="MINDKKIEPCAALAQSLEQDAEYTTRKGLLKYKIYNHELIHSQD
                     LIMLRSGELSKSPIRVSFCPFCGESLKTWEAEATSE"
     gene            complement(63664..64659)
                     /locus_tag="JNZ89_000167"
     CDS             complement(63664..64659)
                     /locus_tag="JNZ89_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001273100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HAY8934152.1"
                     /translation="MSAIITPHFVNGAGVAVFPVDKPTSNYIGAGRRFIISPLPREQA
                     ENTPDGVVDLNYSLVANQSLKPFFQSERVFNALGGEDSLVHWVSSNIHDCQAHDKRDC
                     SHQLTTHFYNGSAVRLCWKHDAEYMMKGYGKLDDQLSLNRANWVMNWAASELKLPPER
                     DLSMVELTFWAIRRNLKDELPDEAGRIAFCQPKQEIPTGTLKESDITWEHSTRELVDI
                     TAEQIVNLSVDEDSGLLYMRRPKAVLGKSPAYLRFVVSRPCIGCGGKVNHPFMYRARS
                     LNEHDRWAVPLCDDCARSAENDVRAWEKAHGIRLYVAANQLFDFAIERGVITFNN"
     gene            complement(64757..65449)
                     /locus_tag="JNZ89_000168"
     CDS             complement(64757..65449)
                     /locus_tag="JNZ89_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HAY8934153.1"
                     /translation="MNQALHEVNLYSRIDGSGYRNIWVVGDLHGCCTLLMNELHRVDF
                     DPTQDLLISVGDLIDRGTENVECLELLQMPWFRSVMGNHERLMIDALSPAGNVNNWLM
                     NGGQWFFMLDTDQEILARALVELVKRLPYIIELNTGHETIVIAHADYPGGEYQFGKDV
                     SLFDVVWSRSRVGDSIDGIGGEITGADRFIFGHTPVRRPKAYWNQHYIDTGAVFCGNL
                     TLMQVKGGQLKV"
     gene            complement(65446..65757)
                     /locus_tag="JNZ89_000169"
     CDS             complement(65446..65757)
                     /locus_tag="JNZ89_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934154.1"
                     /translation="MSIIKEMPVERDEYGCWTHPEYEKFCAGREYISTEEFDAWMKEN
                     NLQWTIRSMDEDHFNLDADGPDIAAWEPERPEGEGWFVGSIHDTEDGPVCIWLREKVA
                     A"
     gene            complement(65754..65978)
                     /locus_tag="JNZ89_000170"
     CDS             complement(65754..65978)
                     /locus_tag="JNZ89_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934155.1"
                     /translation="MTEQTMTNRELVDAAIELAGDFYSMMGYEHRPGFKYWESPHPQE
                     QQVFEMACRAFEVIRGSDVMDAVADLEDEE"
     gene            complement(65975..66250)
                     /locus_tag="JNZ89_000171"
     CDS             complement(65975..66250)
                     /locus_tag="JNZ89_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4752 family protein"
                     /protein_id="HAY8934156.1"
                     /translation="MNIDTTITIDMALNTGLALLGWLYIMSRTWRWLGSIFLKQWKKR
                     RKQELRQKALEAFYDAFELGSIEPGTTARIATKGDLMIVMFRQEKTK"
     gene            complement(66247..66942)
                     /locus_tag="JNZ89_000172"
     CDS             complement(66247..66942)
                     /locus_tag="JNZ89_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000672519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY8934157.1"
                     /translation="MKFSKFSELVNRILSNNHSHRRDMDVTIVVHSPGRIGSTPSVEV
                     QSIHAGFDWDSGQVLIFPAQPLTTLTPEQITDITDSVRKGQSWHAYQEYKKHKEQLEK
                     LSIELDAAKQRIAELEGNCAALAAENAGIKSAIPESRDIEDDNDNMDDVSLAEDFGFN
                     HAIERMRRQIPETPTTDAFLAEVRAQGLEMFAQKCNSKSEQSLASDIRDNWKLLGEHA
                     TDFADELRRGSSK"
     gene            complement(66939..67301)
                     /locus_tag="JNZ89_000173"
     CDS             complement(66939..67301)
                     /locus_tag="JNZ89_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate--amine ligase"
                     /protein_id="HAY8934158.1"
                     /translation="MKSEGLTPAQLAERNAELPRITQEKAFHILERLETLATEEKISP
                     EMLVECSRVILRRKNDIARLTSGAPSVSASPTLYCSFCNKSQHTVKKLIAGDNVFICN
                     ECVKDCNNIIQEEQRESA"
     gene            complement(67291..67575)
                     /locus_tag="JNZ89_000174"
     CDS             complement(67291..67575)
                     /locus_tag="JNZ89_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001369111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8934159.1"
                     /translation="MILRQCAGTMTVESIGKLIGRTGDAVRTKARELGISMILKGDFH
                     PSAKYRQSDIELARQLHQCGVPRREIAEKLEMPLGMINQYVYFERRVYEV"
     gene            complement(67605..68216)
                     /locus_tag="JNZ89_000175"
     CDS             complement(67605..68216)
                     /locus_tag="JNZ89_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000240858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4406 domain-containing protein"
                     /protein_id="HAY8934160.1"
                     /translation="MSKRIMKIYIAGPMTGYPDYNRTAFFSKAKELMEVGHIVLNPAL
                     LPAGLCQSEYMDICLAMVRSANAVYLLKGWEESVGARAEHELAQKLGLNVIYESPTNI
                     ECQVAPHIYRELVNALRDIAAVYHGTEQLRERLAHTISYYLSLSHEHKLRQKVMIKFI
                     MRLSKSLANADPKNPLPKEAMNYLKSCNVVSEDGVLLVRRSSA"
     gene            complement(68216..68371)
                     /locus_tag="JNZ89_000176"
     CDS             complement(68216..68371)
                     /locus_tag="JNZ89_000176"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934161.1"
                     /translation="MMLVAISAIHQQSGTEIGLLYALFFTVLALFELGIELFALINFC
                     VTFLGKL"
     gene            68488..69063
                     /locus_tag="JNZ89_000177"
     CDS             68488..69063
                     /locus_tag="JNZ89_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001171844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase"
                     /protein_id="HAY8934162.1"
                     /translation="MKQSYWEKQRQKAMQKLADPAWREEQRAKRLQQAQRQQQRAREK
                     AASPEYRQKKIEKAKQYEQRRKDKAVSAPPKKTRTSRGLKGRSLTADERRIQTAIGTL
                     PCIACHIHGQHSPVVSLHHIFGRTAENAHKYVLPLCKWHHQYAAPAEVREQYPWLVPV
                     HADGKIGGKADFMRRNADEMTLYQMAIELMN"
     gene            complement(69741..69968)
                     /locus_tag="JNZ89_000178"
     CDS             complement(69741..69968)
                     /locus_tag="JNZ89_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934163.1"
                     /translation="MSYVFQEYAEMGGTYTLYSLDVPSRGDMTLSHQWQNADGEALRE
                     VKTEKCGTFHSFKGKAPNVKSVLEKQRAGEL"
     gene            complement(70154..70762)
                     /locus_tag="JNZ89_000179"
     CDS             complement(70154..70762)
                     /locus_tag="JNZ89_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934164.1"
                     /translation="MKLRALGAALAAMLGCVSANTANATALPAQFRAGQQVMNNAGGD
                     HSQAAIMDFCKREGIPLRPVGTQFIGKTDFCVFAYTAYLTDKAITKTGYSTKDTLSRL
                     SQGWQQFEVYRQQGLGELLQPLFMLALVPEGQQFLVKKGMLRQSDIAGFDSMMAYERK
                     LTEQRNKKPSASCVQSKTAEYSAVAGPLAKQMAEQWCKKYGQ"
     gene            71046..71699
                     /locus_tag="JNZ89_000180"
     CDS             71046..71699
                     /locus_tag="JNZ89_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000410955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maturation control protein"
                     /protein_id="HAY8934165.1"
                     /translation="MEKIAIFSLTTSKPQMLTAILKDGALIINEVKPLPASALEQKQK
                     IPPAIAALRKSKFKVLVDEITPTISAGTGASQVTLKTRHADGRAAIIVGMERYRELKL
                     QKLLSLPQNNKGAFEIPDSIVDTEYNGNGEEVYRVNWQDIRPEHILMILCCYATVYHN
                     VASADYVEQMTGTVEKEQKTGILASFLSIIGHEKVKAGTSQPKTLTGKEVDEDTVIL"
     gene            72028..72357
                     /locus_tag="JNZ89_000181"
     CDS             72028..72357
                     /locus_tag="JNZ89_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000542383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate protein"
                     /protein_id="HAY8934166.1"
                     /translation="MGYSRLDDRYIEDDIFRALFHQEMIKRVSEYHSDNFQYTIKIDE
                     VYRSDLAAYRAYGNADLRWVFRVLVGHESEMEEMPAGTTLTLPDVAWLRNKIRDYASA
                     EPEIENA"
     gene            72350..73546
                     /locus_tag="JNZ89_000182"
     CDS             72350..73546
                     /locus_tag="JNZ89_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8934167.1"
                     /translation="MPDFLKKQDGRYITDGLSSKDFTRLFEIIRKEQTRKRRQAHRTL
                     TPGRLRNKSAEDILKLGKKKGGTFFTRDDLKGFEKLRSKTREKYDSKTAGITYAQLVA
                     SSQAIDIKRANNAVDDGSGIKRATPVSLRHNVINIRVEASDISVHQHHIVRIRFEEWD
                     QMVDDIAEDDKSALKITKSLCAGRVSFDCDCGRHQYWYRYIATAGNFALAPPKEYAYP
                     KVRNPKLQGVACKHVIHSMTRLQSASWQMSIARALQKAATQIAFGDDRRRTTKHFSKE
                     DEKEFNRNRSSKTNVEAAKREWRLYQKRQAALSTKLAKDNGKIDKLRDQLTRARKLSD
                     AQKKRAAAKEAALQREKQKNKELQQRLADQFALKKQAFIDALVMAGTSPEQAEKMFME
                     YVKKGS"
     gene            complement(73581..73940)
                     /locus_tag="JNZ89_000183"
     CDS             complement(73581..73940)
                     /locus_tag="JNZ89_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007374288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8934168.1"
                     /translation="MNIKPIRTEQDYEAALRAVEPMFDNEPEMNTPEGDFFEVMCLLI
                     EEYEKKHYPIEPPSPIEAIKFRMEQQGLTVKDLEPAIGKSNRVYEVLNGTRNLTLPMI
                     RRLHSQFGIPLESLVGV"
     gene            complement(73944..74246)
                     /locus_tag="JNZ89_000184"
     CDS             complement(73944..74246)
                     /locus_tag="JNZ89_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004142601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigB family
                     toxin"
                     /protein_id="HAY8934169.1"
                     /translation="MKIISLKTLRDFWAKNPDAEQPLKAWVDEATKADWKNPAEIKEQ
                     YRTASILKNRRVVFNIKGNDYRLIVAIAYQRGWMFVKFIGTHKEYDAIEADTIELE"
     gene            74392..75183
                     /locus_tag="JNZ89_000185"
     CDS             74392..75183
                     /locus_tag="JNZ89_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8934170.1"
                     /translation="MGRFDEWFADDANLASKESEHDSTQRETPATVEADAGSAPEHGN
                     AGPDSFSILEEQSTAEADSHDNFADSNGGLTPDAGEPDIAILPPSLAGREPTPQLKAR
                     YNGHKAFNDQIRADWMLIIESSPDAFQALLYRPDVGTYGVVSDETGEESFTELDNNQR
                     ELTYQEPEIVYVLDNPDGRDSFHAIDADGEQDGLTDDVLILRIAANNVPVGSILEWNE
                     EMVNGVARRWWYVHRIFSYGTQHVGSLYYCIPARNFDTTQNGVIE"
     gene            75180..75947
                     /locus_tag="JNZ89_000186"
     CDS             75180..75947
                     /locus_tag="JNZ89_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000203291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate"
                     /protein_id="HAY8934171.1"
                     /translation="MTSNKTLLARTGEWQTLRTGKFQTTGFENVDNAFATLISNIFSD
                     ILLVAPAPEEKRFASFLNRPPAERVYMARFDNAIEFLKAVRRANAGQGRKPENQNINR
                     DALPLVNISRTMDINYINDDQQIDRKKVASFCEPDSGTPLAELEYTQAILTYDVTLMA
                     TDKATMSLMCNSLGARLRLMTGTQFEATTHLVRVPVPLICSIQDAKEVGFTDVSAPIG
                     EERIYATQAPISVIADVITAWELDAKRIITETSISMG"
     gene            75951..76931
                     /locus_tag="JNZ89_000187"
     CDS             75951..76931
                     /locus_tag="JNZ89_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000046500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail length tape measure protein"
                     /protein_id="HAY8934172.1"
                     /translation="MAQELQQYFLQSVLINDNKVPRDWIFTAVYVEKTSLKAPLLKLE
                     IHDATGTVIDDWKAKYGASLVAEMGDPNGNAGTFKTDFFVTSAMLAGDVVTVIAVSED
                     VRRFKIPSPRTNLHTNKTPDAIFKAYSGKLKITSSVLKRAVTYHLNAGDKPSKMLSEI
                     ARDKGALCWVCRGEFNFYTLADLMKQTPSFTYEGNNPKAEYTLSKMRLLQQEHATTAK
                     NQYRFVGYSMTDGYVEYGDSSLPVRYISDSDMETLRNMQLSLVPKMDIEVAGNPDIKP
                     GMVIEIIVYRYDQENRIDESMPRKLIVKNVAHFEDRVGYTTRMILGVPNK"
     gene            76928..77581
                     /locus_tag="JNZ89_000188"
     CDS             76928..77581
                     /locus_tag="JNZ89_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000828871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate protein"
                     /protein_id="HAY8934173.1"
                     /translation="MKRRAQIVGTVHPAGLMRAQVRVLPDWNGVPDDDLPWAEYLLPI
                     GNAFVPTVKGDLVWVEFPYLDVNGRIDTRRPMIVGAAQDAPGGVPNVAPEASGNGSGW
                     TPPEVDGAPPRPQISATKDFVIHRNNILEVRTAGGGYEIANTAAGSRIGMNESGQIYI
                     IGPADVIVNAGGSVNVKSANNINVNGENIAVTANGDIAFKAGGTFQATAGNFDFKKG"
     gene            77641..78546
                     /gene="rdgC"
                     /locus_tag="JNZ89_000189"
     CDS             77641..78546
                     /gene="rdgC"
                     /locus_tag="JNZ89_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009444180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HAY8934174.1"
                     /translation="MRSVAFKNIFIYRLSREVNWDTAEVNAALSKFVFTPCGSQDMAK
                     AGWTPILGDNLTHENQGFLLMQHKREEKILPSQVLKEELQKKILKLEEEQDRKLKKTE
                     KDSLKDEVLHSLLPRAFTRKSLAKILIDRSNHLVFVEASSAKKAEDQLALLRKSLGSL
                     PVIPFTPREPLEITMTEWFKNGFPAGFTAGEDATLKGLLDNGGAVRCNKVDLQSDEIM
                     SHIEAGKVATTVAINWMDRASFRVNDDMSIKALTFCDDLYDQNDDIDREDVAQRFDAD
                     FVLFTGELSALFNALVEAIGGEAER"
     gene            78530..79210
                     /locus_tag="JNZ89_000190"
     CDS             78530..79210
                     /locus_tag="JNZ89_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000812238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934175.1"
                     /translation="MKQNDNNRPLVVSLCDFTGAMVAPWLEYGVDAAIVDPQHLSTSD
                     ERMQSGAVLTRISAIIDSDEVYAFLRKNLQRIVFLAGFPPCTDLAVSGARWFSDKANK
                     DPVFQFKAMQVVWQCYDIAKMIGCPYMIENPVSKISTFWRKPDHIFHPYFFTAYCQED
                     NYTKKTCLWSGQGFVMPDALMDESLGKPDNRIHAAPPGPDRANFRSATPHGFAKAVFE
                     ANKGVLYE"
     gene            79203..80108
                     /locus_tag="JNZ89_000191"
     CDS             79203..80108
                     /locus_tag="JNZ89_000191"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000045489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HAY8934176.1"
                     /translation="MSKSIASIVIEKQDTMAEISYMRTIRTPDEYERPIFKWVGGKFS
                     ELPTVLEHLPHGKRLIEPFVGGGSVFTNAGFRHNLLNDINGDLINFYQTLQREGHSLV
                     TLSYSFFQNYNNADGYLEVREAFNRGKYDQLHHAAAFLYLNRHCFNGVTRYNQNGEFN
                     VGYGKYKAPYFPHAEMEAFLADDVLKNTSFVSGDFAGVIEAAGEGDVIFCDPPYEPLP
                     DTEGFTSYSGNSFRFDEQKRLVSLLVEAHQRGAKVVITNSGAPSIRELYEGNGFKVHH
                     MAARRSVSCKASTRVVANDIIAIMK"
     gene            complement(80157..>80658)
                     /locus_tag="JNZ89_000192"
     CDS             complement(80157..>80658)
                     /locus_tag="JNZ89_000192"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="catalyzes a two-step reaction, first charging a
                     glutamine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HAY8934177.1"
                     /translation="IDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNI
                     TTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFL
                     SVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRD
                     TWAKLG"
BASE COUNT        22241 a        18617 c        19807 g        19993 t
ORIGIN      
        1 agcgggtacg gtcagccagc cggggcgcaa tgtccgggca aaatcaggtt taaaccgtac
       61 gatactggat cagggctggt atgaaatgcg ccgccagctt gagtacaagc agctctggcg
      121 tggcggtcag gtgcttgctg ttccgccagc gtacacaagc cagcgttgcg cgtgctgtgg
      181 tcatacagcg aaagaaaatc gcctgtcaca aagtaaattc agatgccagg tatgtggata
      241 tacagcgaac gccgatgtaa acggcgctcg taacatttta gcggcggggc acgccgttct
      301 tgcctgtgga gagatggtgc agtcaggccg ctcgttgaag caggaaccca ccgaaatgat
      361 tcaggcgaca gcctgaacgt agcaggaatc cacgtccttc agggcgtgga ggatgtcaaa
      421 taactgcttg agcgcttttg actggctcag gatgtcttct ccgtaatact gaaaacaatc
      481 atcaacaaca gcgggatagc ctgtcggggg attcaggctg gttggtatag ctgacgcgat
      541 cgccagcatt aagcgatatt gtgtttttga tgggttaacg tgactcattt tgtcccttgt
      601 ttactcattg tcgccatgca ttttttaact caggaatatc tgccatttca attaacttgc
      661 gaagtccagc actgactttc ccattgccaa ccatagcaag ccaatctctt acagctttcg
      721 gcatgtagag cgttgcagtt accggctctt caaccctggc aggacatccg catacaggcc
      781 atttaattga ttccataact gcggatgccg gggtgagggt ggggacattg agtatatctc
      841 taccagaaaa ctggataacg atccgttcag cgagcgagag tatctcactt tcggcaagaa
      901 ttgatgccaa ctgcgcctca acaagaaagc gacttgttgt gttcagagag tggctcttag
      961 cgccattttt atacgaaaca aagattcgat acgccataac tctaatgttt tgtgttagaa
     1021 aattaaaatt aaaacacata acaacgtgac tgttaataga ttttatttta ctaaaactat
     1081 tgactaaatc acaaagttgg tattgttagc ccgtcaaaag aaccttcacg ccgcgcccga
     1141 atttagggct taaccgtgaa taaaaacatt cagccagctc gtgatcgcga gcgcgagatt
     1201 atgaatcggg cggcaagcgt catggctatg accgtcgatc cgaccaccga tgcagcaggc
     1261 aacatgattg ctgaccaggc agtaatgatg gaaaacctgg ataaagcaat ccagaaagtg
     1321 cctatgtttg aaggcgtaaa tccagaggtc gctcgtcaga tcactggtgg gtgggctatg
     1381 tctctgcatg agtataaacg tcaacatggt cattacccgg caagtgacat cctggcgaac
     1441 gcacacatgg ctcttgaacg cctgatgact gaatgtgcca gtgataccca tgaaggcacg
     1501 ggtaaggcaa tgtttgagtc tgtcgcgcaa tcaatgcgta gctctgacgg cgtaatgaaa
     1561 gttgctcaat atgctgctct aattctgcct gcttctctgg gcgctgctac cagtgatgcc
     1621 tgtacttttg ttccttgtga tcgtgacgag tcaaatattt atgaactggt caacgtagca
     1681 ggcacaaaat tcggcacctt caaccaaggt gacgaactga atatgcagtc agctggtgtt
     1741 tattctcaaa tgaagcgcct gtatgccctt tccactaaag gggatggcag caccaaaacc
     1801 ttccagttca acatccaaca atttgaggga caatcctgcc cgcttcgcgc tggttataac
     1861 aaactgctga tcaaccgcaa accgtccaaa gttgacgacg gcgatggcaa cctttatttc
     1921 aatgctaaag acagcaaagg taatactttc tcagcgactg ccaaagttgc ctatgacact
     1981 ggtgtcattg acattacatt tacccaggct ccgccagtag gtactgaaat tgctgttcag
     2041 gtcgaaatta acatcgagcg caatccaagc ctgattccgg tgatcaacca ggctatgcgt
     2101 aagtacgaag ttcgtccgtc ccagtacgta cttgcttccg aacacacggt aatgtccgca
     2161 tccgatttaa gccgtgagca cggccttgaa ttagcggcac ttcagttctc cgcgatgcgt
     2221 aactggatct cccatgaaac cgacatcatg cgtctgcgca ccctggtatt ccataccgtt
     2281 tatggtcgtg aatttgatgt ggctctgccg gaagctcaaa actatgagtc ctgggtcggc
     2341 ctcctgcgtc acgcagtaaa cgctctgtct caagaaatgg caaatcgtac cctgacaacg
     2401 ggtattcgtg gcggctttgc tggtagtgac gccgcgaact tcctgcgctc tctgcctcca
     2461 cagcacttcc agatcgcacc aggttacgtt cagtcgccgt atgtacagta catcggcacc
     2521 ctgtttggca cgattcgtat ttacgaagtg ccgcaacctg tctgtgagca attcctggca
     2581 cagggatatg acttcgggct ggatgacatc ttcttctatg ggcgtggcga aggcattggt
     2641 aaagccggtc tgattgctgg tgatgcagtc ccagcaatcc cttacgttca cgaaaccaat
     2701 ccgtctctcg ttaaccgtac cactctctgg ggcagtgcca tcaacgaagt acatcctcgc
     2761 aacggtgaaa actacttcac ccgcctgcgt ctgactcgtg ccaaagaagg tgctatcgac
     2821 atgctgacag gcaaggttaa cgaaaaaaag tgatggtggc gaacgtgtcg gtatcaccaa
     2881 cgtcacttga cgtagatgaa ggtgaaacta tcgccgcgaa cacttcaaag gcacagaaaa
     2941 aaccaaaaca taagtaaggc aaaaacacgc ccctgattaa ggggcgttaa ggagaaaaaa
     3001 atgtcaaaca ttcaagtaac tatcacgcca cctgacgcaa cagacaaatc tttcactgtt
     3061 gagtcagatc accctgatat tgtccaggtt gatggcacta catgtaccgc tcttaaggcc
     3121 gggcaggcag tgctgacaat caaaacaaat gacggcaata aaaccgcaca gtgcacagtc
     3181 actgttaggg aggcacataa aagcgtaacc gccgtcagtg ttgaaccaac tacgaaagaa
     3241 gtaaccgtag gcgataactt cacggtaagc gaatcctgat cagaggctgc ccattaaccg
     3301 tgggcagcct tgcctcgttc tctcgcttta gaggataaga accagcatga ataagattag
     3361 tttttcggta gggcaggcag ctggcgttgt tgtaatgtca gtaaatgctg acgctaacct
     3421 caccaatacc agcggtggcg catccgtctt tgctgggctt gtaatatcgc gtcgtggcgc
     3481 accgggtaag gtactgaaag ttgacgatac gacttatcaa agcgtattag gttcaccgat
     3541 tcaccctcgc ctgggcgcgg catttgaacc atatcgccac gtggagcgtg cagtaaaagg
     3601 cggctctgga tatgtcgttc gagtttgcgc taaagacatg aaggtgccgg gtatttctgt
     3661 ttccgttgtg ggcaaagcaa aagcggcaaa ggcgagcaaa gaactttccg ttgaacctac
     3721 tgaaaccaca gcaaatccag gtgacacatt aagcgttggt gttgctccaa ctgcaacgac
     3781 tcaatcagtg accttcacac ccaaagagac gccccagatt aaaggtggag agaaggcatt
     3841 attcttcatc aaagatggtg atgcatctca aaatcgcacg ttatcactaa ctcgcgatga
     3901 tgaagaaagc gaactcttta cgctgacgct gaaagaaaaa caaaccgatg ggtccattga
     3961 ggtgctggaa agccaccagg tgtctttcaa tccagaaggc accaacgaca tgggccaacc
     4021 agcatggatt ccgacactgc ttgaaagcca gtccactcgc attggtgccg tactggcaga
     4081 taatgcagaa gcatccgctg ctcaactcat ttttgaggat gtagcttttg aaggtggtac
     4141 tgatggaaat ctgtccgaaa ttgccgctgc agactatctg gaagcattaa aggttctcga
     4201 agcttcagag gttaattaca ccgcattgct gtcattgggt tgttatgacg catccgcctt
     4261 agccgcaatc aaaaagctgg ctgaagatgt tcgcgtagac atgttctatg acctgaaggg
     4321 caaccagaca cctgaaaacg ctatttcaga agcgaaaagc cataattttg gcggctcaca
     4381 tcaaccaagc cgttactact tcccgctctc ctgccgagat actttcactg gaatgaatgt
     4441 cgtctatggc attagctgcg acgcattcgt agcgaaggca aaaggagtgg cgctggtacc
     4501 ggatgttggt ggttggcatt acgcaccggc aggtatatca cgcgcgatta ttgatcgaca
     4561 gaacattgcc cgaattccaa atatcggtgc agttgatcgt gaagcgttcg ttcttgcgcg
     4621 cattaatcca gtttcagttg ctgctgacgg gtccgtttac attgacgact ctttaacaac
     4681 ttacagcaaa aacaactatc tgcgattcca gcatgtgtct tccttgatga acgccatcgc
     4741 cagagatttc tatgaagtag ctcaggcgat taagcacgaa ccggatggca ttaccaaaga
     4801 agcgctaatg aaagcaatga ctgaattgct tgaccgttac gttgcagccg gtgcgctggt
     4861 tactccacgt gacaagtccc agggtgaaga tccatatgtt gttcaggttg tccaaaagga
     4921 catcgatctg tgggaagtgt cctggtctgt ttgtccgacc ggtacagctc gccgaatcgt
     4981 cggtaagcca attctgatgc gctgatttat aacccccgct aaatgatgcg ggggagagag
     5041 gtttgaatat gaaaaattat actgctgatc cgtttatgcg tgcgattttc ggttctggct
     5101 gctttgaaag cggtgataaa tccactcagg acaataatga taacgccatg ctggaaagcg
     5161 caggacagaa aggaaaggac actcaaccaa agcccaaaga cgacattgaa accgcgatga
     5221 tggaagcggt tgaatcccgt gcacaaggtg atatgcgcag cctggcagcg tccatgcttg
     5281 ctggttgggt tgaagatggt gatccggagg ctgactcatt tgatgcatta gcaatcacta
     5341 tggctggcct ggctgatatc gatgaaggca ccgatttcac cgatgaacaa atcgatgctt
     5401 ataacgatgc tctcgcagct cttgctgatg cagctgttgc gcttggcgct gatcaggacg
     5461 atgtaaccga aatgatcgac gatgaagatg actcagctgc cgaacgtgtt tttgacgctc
     5521 tttccgaaag cgacaccgac atgatggaaa cagctattgc catttacacc gttgctggtg
     5581 gtgatagcgc aatgctggaa gcggtacgta aaaaagtggt tcgtgatggc aaggttacca
     5641 tcatccgtaa acgcccgcgt cctcgccgca tgacgtcatt gcaaaaacag gcgctgaaaa
     5701 aagcacgccg caaagcacat acatccgtag cgaatatcaa ccgcaaaaaa tcaatgcgca
     5761 ttcgcaaaaa acgcggtttg taagtgacat aggccgcctg caaaggtggc ctctaccagg
     5821 gagaaatagc gtttgatttg cggcgcgata atgcctgacg gaattagtcc gttaatgaag
     5881 gtttatatcc tctcttcaga ggatatggtc gtcggttata tcggtgaagg atctaccgca
     5941 gaactatcat caatgtggca atcaccattt gaaaaccagt cagtaggagg tttgcttggt
     6001 ggtattagcg ctgcggctgg ctctcttgca gatacgcttc agaccgcaac cggcgtaaca
     6061 acaaaaaccc tcttcaactc aatgcttgtt tgggaaggtc agcaaccgcc tgaatttaat
     6121 ctggtaattg atttcatggc gacaacgaac gcgcaacttg aagtgaacgc agccattaca
     6181 gcattgctga agatggaatc gccggaactg aacaatgtag cgccattcgg tcgtcgcccg
     6241 gagacagtaa cgttaaacat aggtaggaac atagccctta ccgacgttgt tatcaaaagc
     6301 gtgagttacc aactggacgc cccgcgcaca ccagaaggct atttcactca taacacggta
     6361 accctgcaat gcagcggtaa tacatcgatc aaccgtagca atatctcatc tgtttttgtg
     6421 taggagtatt tatgtccggt tttgcaaata caaaagccga tatggccttt ctaaaatccc
     6481 ggtttaataa aaacctggct gcaggcgaaa aacttattgg ttctgaatat tggatgacca
     6541 ttaagggtta cgaacatctg tctgtacttg ttcgttccac tcagttacca gaaatgacac
     6601 gcgaagatgt ggaggattac gcccctggtg gcatgaaatt caaccagcac ggaccattac
     6661 gcaactctgg tgaatttcag gtcacatgcg cggaaactat cgaaggcgca gttctcgccg
     6721 ctgtaaaaca gatggtatac ggaaaagaat atctggaaat taccttacag gcggcggcgg
     6781 aatcgaatag cggtaaccat aaaggtctga tccgcacata ttctcattgc aaagtgtatt
     6841 ccgacgccgt ggacttctca tccgaagacg taacagcggt cgttaagcct tccctgcgta
     6901 ttgtttacaa ctgggtagag tgatcttttt cccgcccttg tggcgggaat tccttgtatt
     6961 tgagttgtag gtacgatgac accaaccgaa ttattagaaa gcgttaaagc acgatttaat
     7021 ccactgcttg tgcgtgaaga agaaacgctg aaagccttcc tgatcaaagc tctgaccacg
     7081 tatcaggaca gggcaggggt agtgaaaacg ttaaaacttg aaaaagctgg tggtactgca
     7141 atcccgttgc cagaagatta tctctctctg gttcatgtta ccgacaacaa tggcttgttg
     7201 gtctattcgg atgaattatc cggatttatt gaattagagc taacaggttc agaacgctgg
     7261 ccttttcgaa tgctgtatct ggttaatcta cgcgacagaa agctggatga atggcaagtg
     7321 cctcctgcaa tcattggaat gctggaggaa tatctggagg cgcttatcaa tgtaagaaat
     7381 gtcgcccggc agcgtagagc gtccatcgac gggaaatttg actactccga tctgcccgat
     7441 gaagccacgc tatatgcccg cgtgcaggag attgaggaaa aaatgtcctc aaaccgggcc
     7501 attattccgg gggctaccat tttttaacgc tggaggcgca gagtgagtat tttcagcagc
     7561 gttggtagaa cgttgaccac cgcattgtca tttaacacga aatcattcac cagcaacctc
     7621 attagcgaca ttcttgataa agccatatca ggcggcgggg taagcgggaa ttacagtagc
     7681 gatattgcct acgggaaaaa tattgttgct gccgctatgc gtatccgtta cgcccagggg
     7741 tggcagtgga ccgttgaagt ggatggtctg aacggcttcg atatgttcgt gaaggatatc
     7801 acctacagca gtgggaacat cgagacagaa agcaaggtga tcggcagcgt agaattcagc
     7861 aagccaacct atgttagcgc cggaccggtc actatgaccg tgagggatac cgaagatggc
     7921 aagatcatgg actggttcaa agagcgtcgt tctcgtgtaa caaatcctga tggaacaata
     7981 aaccttcctc cggaatatct gatgaaaatc cgtgtctacc gggtaactca ggacggcgga
     8041 aaagaactgg aagaagaaat gcgcgtattt cctactcaac ttggggaaat cactcgctca
     8101 cgtgatcagg tgtcagagtt cttgtcatac ccaatcactt tccagaaata cacatccgca
     8161 ggctcaggtg tttctgcttt ggtcaacggt gccgctggca tggctacaag tgcgttaaag
     8221 ggggctgtga gtggagtgat caaattctga atagctttaa ttatgtgtgc tggagggttg
     8281 ctcatttccc gtcagcaccc acgacctcaa cgatagcggg tagggaaggt agcgcaatgt
     8341 tgagggcatt ttttacatca tcaatccatc agcaatgaag gcattcttta catatttcaa
     8401 taatatcaat cagttaacac agtgaatgat aataaaaaag cgcaataaga atgcacgata
     8461 cgcacgatat tggttgaggg cgatttttac ataatcctta catatcaata tgttgtataa
     8521 aaacacaact tgctaataac gagatacatg caattaagat gtaaaaattg ccctcaattg
     8581 ccgatcgtta agggcaaatt ctacaccttg agaggggtgt aaaaattgcc cttaagactg
     8641 ctgataggta aattttatcc tggtaacttt gccgccttcc gtcacctctg agaagactat
     8701 tttcattttt gtattttttt caatctctgc tacagccttc gttaaaaaac ttctcttaaa
     8761 ttcggcatac cgctgatagc tttttggtaa cccataacgc tcccgcatcc attcgacgcc
     8821 aagtatggca aagccgcttc catcatcctt cctgtactgg cataaggact cataaagccg
     8881 catagaataa ggatttgtaa ggcgagatac ttcggtaaaa ttcagccttg tgaatctctt
     8941 atcaagcaga gtaaaaaacg gcatgagata tggattaaga tgaataatgt aagtcccgcg
     9001 ccgtggtgaa taggcatcct taatcatcca gggataagac tcataactgt cttctgattc
     9061 ggtcgattca tcagggttat atatcgtaac tttcttctcg ctaagccctg aaatggcctt
     9121 acgaatatcc ttgctggctt cagcagaggg caaattatac atctctgcat attcgttgac
     9181 cgtcaactca caggcacctg aaccaagaac gccatcctta gaagcatagc gaagtcttcc
     9241 caccacaata aacaacagtc gcttttggtc gcgagtcagg tgataagcag cctccgtgat
     9301 ctcattggct tgtgccagac tacgactaat aggtgtcgct gactcaatca ggctgacggc
     9361 ttttgctgtt aattccgctc tgttcataac cctgtgtgat ccttcaaatg gtgagggcaa
     9421 tttttacacc actttgaggg caattactac accttttgag ggcaaatctt acaccttctg
     9481 agggcaaatc ttacaccgat cgtatttaat tgagggcaaa tcttacacca gcctcctcta
     9541 cagcccgcgc cactactggc cccagcgacg cctaaaaagg atctaaaaag gattaaaaat
     9601 ggaaaaaggt ttataaaaat actctgtgga tatgtgagta gcgtcactta aggtgtaaaa
     9661 atcaccctca ataatcgctt ctcgaccggc aaagatcttc attcaatccc catcgcaaat
     9721 cacacactac ctatcctctg gaaaatgaac agatacctgc ttttcggagg aataattgaa
     9781 cattccaaaa ttcccattgc cttcccgtcc tgagacagaa attcagttcc acgcccctac
     9841 cgtgaaggat gcgctgaaat attctgacct gaacccggca gaagatgagg caacgactac
     9901 agagtacctt aactctatgc aggatggtga aattaacgac agtgctaact ggacagttca
     9961 ggatcgcaga actgctcttt ggtggatatt tgttaattcg cgccccgatg ctgtaatgac
    10021 ctactcctat gagtgcagtc actgcggtaa tacgcatcat gccgatatta acctgagcga
    10081 cctggcccaa acagtagaaa tactcactgt acctccttac gtgaaaacca acgtaccagt
    10141 aaatggagta ccaactgact ggatacttaa accattaacc gggaaaggcg cggaactcct
    10201 tgaacgaatg cgagcgtcac ttcctgatat gaaaagtccc gaatacagtg ctggcgtagc
    10261 acggatgcga attgctgaac tcgctttatg cacggcgctt aaagacgatc cggaggactt
    10321 cacgcaggcc gctaaccgac gctttgacat cattgaaagc atggcgcttg aaaccgaatt
    10381 taccccgctt gtggctcgca tacagcttat gcaaaaagac ctacgccacg gcctgaaaat
    10441 gtctattgag agaggctcaa gccgactgat cctgcctccg caacattgca aaaacgctaa
    10501 ggagggtgca gatgtgacaa ccacactgta cgtccccttt ctcaatagag agtttatccc
    10561 atcaattaga tctgaatgga tggctaacca ttattaacaa cctgactctg tatggatatc
    10621 agcccgttag tgacgttgaa caattgccac aatggcgagc actccatatg tcaaaagcac
    10681 tggaagaaaa atacaaagct caagccggga aacgttgatc gccgctggca aaagagaggt
    10741 tattttgaaa gagaataaag accgtatcgc aataattgac gctattcagg gggcgagcac
    10801 aaacgaactt aacgctcttg ctgagatcaa agacgccatt ctctctggta gagggtctat
    10861 aactcaactt ggtgaaaatc aaggtaaagt aagtcaaaga ctatcccgta gactcatagc
    10921 aagcgaaccc tatgtctctg atgatgccaa gaatacccaa gctaacccat atataaaacg
    10981 ccttccgatg aaaaaaggga ggacgcaggt caacaacgga gaagaacgtc tcattgttgc
    11041 aaccaacaca tcagagcgcg ttcattttgc gtcatcacgc cagtcagccc aaaagttgaa
    11101 aggttctgtg ccagtagccg ctaattctgc tcctcttgaa ccacaatccc cccaaagtca
    11161 aaaaggaccg cttcgggata gtaacggacg ctttgtatcc cagaaaaaca acgaagatat
    11221 agccagaaaa aaagaatggc agaaagcaca taaggccgac gccaaactac aagaaggctt
    11281 cctccggaaa ttaggctcca ttataggggt agatggcaat cagtcttcca gtgaagagtc
    11341 tttaacagat gccgcaggtg ttggcgctgg tggtccgttg tggatggctg ctcgcggcat
    11401 gtacgatatt actaaagaga tcacaggtaa agcagaatct cttaaagaat gggtagaaaa
    11461 ggggaaaggt gaggcttcac cttcgaaagc gacatctcca gctatcactt atccggcggt
    11521 ggttaatact caaaaagcaa cctctgcaac agcatttaat aatgctgttg agacaaaatc
    11581 agcacaagca gtagaagagc aaacaaaaat tcttcagacc aatgacaaca aaataattga
    11641 tggtctggaa aatgtctccg acgaagtagt taagctacgc aaatcagtat cttctgggaa
    11701 taagttcggc ttaagtgatc tctggagaaa tcgagcaagc agaagaaata aaatcaatat
    11761 tggcgatcag gctggtaaaa ataaacggaa caaaccgaaa aggaaaggtc gcaatctggg
    11821 gaaaaaagcc ctttctgttg gtgaaaaagc cgctgccgga accgctgctg ctggagctgc
    11881 aaagactgtt aaaacaaagg ttagtaaagc caaagacatc agcaccacaa gcgacgcatc
    11941 taagggtatt gctaaagaaa caaaaaacac agcaaaggca gttaagccag caggtgttgt
    12001 tgccgaagag gccacagtta aaacaggtga aactgttgca aagaaaaaaa ccgaatccgt
    12061 agccctcaaa agtgctgcaa aaataggtgt taaatcagct gcttctacag ctgcaagagc
    12121 tatccctatc atcggatcgc tggctatggc gggatatgac gctatagatg gttacactga
    12181 tacagatgcg caaaaggcag cctttggatt aagtgacgat gatgctgtat ccgaacagca
    12241 aaaaacggct tacgcaacag ctaatgtgct cgatatgggg ggcttggtgt cgggcgcaac
    12301 gaacttgata gggaaaggaa tttctgcgct aggatttgaa agagcaggtg aaaaacttca
    12361 gaattttgat accggagata ttgctcgtgg tgttaacggc gcggtagatg tcaccaaatc
    12421 tgtttttggt agccttaagg atacattttt atccactgac gaaaacacga aacaagtaaa
    12481 aaaagctgtt gaagacggca ccaaaaaaac tgtcgatgcg attcattctc taggtgaaca
    12541 attacaaggt gggcgtaatg gcgaggatgg agttggtgag cacgggtata cttctccaac
    12601 tgaatttagt tcacctgcca acaacaccat tgcagcggat ctgaatattg gcggcagcaa
    12661 cgctaaaaac cgcaattacc gaaataataa tctcggcaat cttgtttttg ccaaccagga
    12721 aggggcgacg ctggaatcgc caaatgcaaa aggtgaacaa cgttttgcgc gatttaacac
    12781 acctgaagaa gggatcaggg cactggcaaa ccaggtttcc agctattaca acggcaccag
    12841 tgccgcagcg ggatatcaga agttacagac ggtatccagc atcatttcaa aatgggcacc
    12901 gccaaatgag aacaatacta accaatatat tgataacgtc agtaaatatc ttggtgtatc
    12961 gcctaatgaa aaaatagatg tcagcaaacc agaggttatg acgcaattag ttcgtgcaat
    13021 tgcgacgaaa gaaggcggaa atccggcagt taataatgag ttcattaaga acgcacttgg
    13081 agcatttaac acaaacactg gtcgatggga gggacaattc tctgacgaaa cattggcgcg
    13141 gattaataaa attcagaaag aaaatggtgg tcagctaatt gcccgcgatt cgcaatatag
    13201 tgttggtcgc aaggtaaaat atgctaatgg aaaatctcca gctcaaccag ttttgaatgc
    13261 cgttccgaca gcaacacaac agccaattga ggttgcacaa catgcccagg cagtcaaaaa
    13321 gccacaaaaa acaggtaacc aaccacaacc gattaatcca gagaacgctg atgttaatac
    13381 cggctctcca tcgagtttgc ttgagcggtt aatcgcaata aatgaaagcg gaatcagtgg
    13441 tgcaagtaat ttatttggcg gcgcggctac cagccttgct ggaacaagtc tggacctggt
    13501 aaaggatttt gcgttggcta cttcgtttgg ttctatatct tcgctttccg aaaaagcgaa
    13561 aggaatggat caggctctta ctgaaaagat atccggctta accggtaaat cttttggatt
    13621 taaaaaagct tctcaagtgg ctgatatcgc aacagccata caacaaaaac gcactgttaa
    13681 tcacgataca gaaatcattg atctacttcc gggagatcaa gtatcccctt ctactccgaa
    13741 aactccactg caggagcagg ctctagcaat cagccaggct atggagggct tttcatctgc
    13801 agcgccagta ccgaaaaccc cacagcagga gcaggctcta gcaatcagcc aggctatggc
    13861 gggcttttcg tctgcagcgc cagcaccgaa aaccccacag caggagcagg ctctagcaat
    13921 caaccaggct atggcgggag ctgcgccagt agttacctct ggaaaacgaa ctatcacggc
    13981 accaagtgat gtgcagattt atgacaacgg ctacaaggtg gttacaggtg aggataagag
    14041 cttctttggt tcgctatttg attccacggt gtcagggctt aaacagacag gaaccgcagt
    14101 aattcctgcc gttggcgata acctttcacg acttgttggg gggattgata gtacagggat
    14161 attgaacgat cttgtaatgc agtctactgg gcagaatagt gcgattgcgc gagctattag
    14221 cccattaaca agaaatgttg gagactggct gaatgggggg attcaacaaa ccgctaatag
    14281 cattagggga atagcaactg gtgccaataa cgccatattt ggctctgctt cagctgtgca
    14341 agaacctttt cttgctatgc cgccacaact ccctactgta accgatctcg cacgaagcgg
    14401 aataagacaa ccattaacta ctgacactat aaataacgat cctgctatgt tgaaggcgct
    14461 ggataacatc tgctctatcc tgaacgatct gctgaatgtg aacaagaaca atacaaaagg
    14521 cgatccggat aatgttgtca aaacatcgca gccgcagccg cgaccacgtg cgagcacaac
    14581 tattaatgac cagtcgctgg atgctctgct tgaggattaa tactgatgct ttacgaaata
    14641 gacgcaagac ttcaaacgaa tgagagcggt gtcattattg cagaaggaag taccgcagca
    14701 tggatggccc gacttgacga gtggctacga acccctgaag ggagtgttta tggtttaccc
    14761 tcttggggga gtccaatgga agaatttaag catgaaccat tcggctctga aacttcgcac
    14821 atagttgaag tggctattga agggagaatg atgaaaaaac tacgacaaga cttgccaggt
    14881 ttggatgtgc aggggattcg ttgcacatca atttctgaag attctttatt aattagtttt
    14941 tatgcgaaag gtgggagcat ggatattgtt atgcagaaat caagtggggt gggcgcgtga
    15001 cgattacaga attactggac aaatttaacg ccaagttaaa tgaaaacaca tggtggtcac
    15061 gatttgtaaa tagtcagttt gtgcagatgc acgctatatt cggatcgcag cttatttata
    15121 ttgcccgtac atttgcaagc cgcggcctca ctgagggact tatttcaacg gcaacgcgtc
    15181 gctcaagtat tttagcggtt gctgaagacc gtagctacgt agggcgattt gttagtgctt
    15241 catacggaac aacgtctata accaataaaa ctgatcggga tattacgtta ccagccgggg
    15301 ctgaattgct tgccaatgac caaacacctt tggcaattat taacagtgtt gtaattcctg
    15361 ctggaggaac tatttctggc gtagaaacta aacagcatga agctgttagc attacatttg
    15421 atattgagaa ggaaacttta tttctgacat tgttgctttc cagagagtta acaaaagaag
    15481 tctctagcct ggatgtttat gttattacag atggagtaga agaaaaatgg acatataacc
    15541 cattatttag aatgtccaga gacaagagta agcactattc attggcatat aaacctacag
    15601 aacaacttgg agtcaagttt ggtgatggtt ctatgggtat gatgcctcca gcaggctgtc
    15661 aggttcgaat cgatgttatg gctagccttg gcgactatac tttggctgaa ggacaaaagt
    15721 tagaaccggc tggaaatatc gctcaatatg tggagtcact agagtttaaa actgattcga
    15781 tcattaccgg tggtagtggt atggaaacta cagaagaaac tcgaaatcgt gctcagtatt
    15841 atgttgcata cgatgaacaa gtggtatggg gcggtgatta tcgccaattc attcagaatg
    15901 ttgttcatgg aacttcatgg ttgaacgttt ggggcgaagc gttacaagag aaaataactg
    15961 ggtttgacgt tcgaaacatc aacaaaattt tcttttgcgg acataagccg ggtgtaagcc
    16021 aggctcagct aaaatcagaa atactgaaag ccctggagaa tgtgccaaat gaattgaaca
    16081 agcggttcga gtatgtagat acaaatgaac agccatttac tataaatttt ataggtattg
    16141 tacgtaaaaa tgttctgata gacgatgctc aaaatgctat taaagcagcg ttggaagata
    16201 attttggccg tgattcgtca tcattcagct tattactaca gagtgatgat gattcccaac
    16261 aatgttatgc acaggtaaaa gttaaagata tttggcgagt aatagagtct ctggatatgt
    16321 ttctgtctta cgacataaca atacaaaata tgaaagatgc tgtttacttt aatgacttca
    16381 tttatcttaa cgtaaaatct tcaacgttca gcatttctta cccgtaatga ggttagcatg
    16441 aaagataatt ggcttaagga acgattaact aaagtaaaac aggattcaca tctctggagt
    16501 gcatttatag acgctttaca ggatgtctgg aatgaggcag tagaaccaat attaacaaga
    16561 ataagtaaca gaaaatcctt cttcactatg gacagtgagg atatggatgc ccgcattgct
    16621 gaatacgggc gttttttcgt tatcactgaa aaagataagg accgtaggcc aatgctgctg
    16681 gcgcaacgtt tagatgaagt gcactttaaa ggcactatct tgcctattga gcagacattc
    16741 tggcgtgaat tcggttgtat tcctgttagt tgggaaccgc tgtatgcacc tgtaaatata
    16801 gaaaaacacc cctatggttc atattttgcg accgaaatag aaatacctac ggcacaggct
    16861 caattcggtg agttcttcct gacatcaagg gggctggtcg ttgttgatca gaacaagcta
    16921 tatcgctcat atggagagca ggataaagaa gccgctgtgc agaaattgtt atctgacttc
    16981 gaaacagtaa tagccccttt gttgccattg catattgttt ttgatggcgt ctcgtttcgg
    17041 cttagtgctg tattccctga agtggcagaa atactaaatt gcttgtctac ggatgtttcg
    17101 gtaattgaag gtgtttatgt tactgagagt atggctgata tgctatccca tagtgatacc
    17161 tccagccagg tagacaatat ttctcttaac gccataccga accgaacggc agaaaagcaa
    17221 ttacatcttg atgtaacccc actcgatgcg tggcctttgg attaccacct tcaacctgtt
    17281 taataattct tcccccgcat ttgggggaag aacaacggaa atcacaaact gagcatactc
    17341 tcctttggtt cattgcttat gaaggggcta tgttcgtatg gctgaaaatt taaaggtaag
    17401 agatggtaac cgcctgtata aggcgcaatt gctttcctac tattattcac gccgcgctga
    17461 gtcggcgatc ggcaaaggtg cgcgttttgt tatctctaag gcgtattggt gcaaatctag
    17521 tctggtaact gctaatggtg caggaggctg gaatatagcg gacattccac tcaattttaa
    17581 attgagtaac gctcaacagt ttgctgtgtc cgatctgata ttgtccagtg tggatgggat
    17641 tatcactatc aatgcagcct tccctcaaga aaaaatgccg gataacacgc cttacgactt
    17701 taacacgctt gtgcttgttg atgctgagga acaggctttt gctgtgcttt gcacccagca
    17761 agacaccctc tataaaggta aacgttacag tattctcatg acaatcgagc aagttgaggg
    17821 ttgattatgg gtgctgataa aacgaacaac ataataacac tatcctctgg tgtctcacag
    17881 ccgttgcttg ctgatgttca atatttcgaa ctctatagta gttctgctct taacagaaaa
    17941 cttaaaaata ttgttttgcc gggcttttac tgtggatttg aaccagttcc cggcacaggg
    18001 ttgagcgtcc gtataacttc tgaaaactca gaaggtaaag gggctgcttc agtagatgta
    18061 aataatgttc agatatccgt tcagcaaata gaagatgtga ctgtctcggt aaaggctggg
    18121 gctaccaaca ttattgtgct ggaagccaat tttgaacatg gtgtaaaaac gacacaggta
    18181 gatagcgcat cttctgtcag tgctgcaaga atttacgcgc gtagagacaa tactattggg
    18241 cagaatcaaa ttgaattatg tcgagttatc gtgcctagcg gcgcaacggc tgtgactaaa
    18301 gaaatgattg tgcttaaata ccgagttaac cgtgctgttg gtgtcgaatt ctctaatgaa
    18361 ataagcagta cagaagaaag aaaagcggct acacctctgg ctgtcaaaac tcttcatgat
    18421 ttggttgata caaaagctcc gctcaatagt ccgcatctgt caggtacgcc gacagtgcct
    18481 acggcctcac aaggcacaaa tagcacgcag atcgcaaata cagcctttgt taaggcagct
    18541 atagcggcac ttatcaacgg tgcacctggc acactggata cgcttaaaga aatagctgct
    18601 gcgatcaata acgacccgaa tttcagcaaa actatcaaca atgctctggc tcttaaagct
    18661 cctttagcaa gtcctgcatt aacgggaata cctactgcgc ctaccgctgc acagggtacg
    18721 aataacacgc agattgctac gaccgcttat gtaagagctg ccatatccgc attggttggt
    18781 tcatcaccag aagctcttga taccctgaat gagcttgccg cagcacttgg taatgacccg
    18841 aactttgcga caacaatgac aaatgcgctg gcaggcaaac agcctctgga tgcaacttta
    18901 accgcgctcg ctgcccttgc gactggtgca aacaaactgc cttatttcac tggtaaggat
    18961 acggtagcgc agactgattt aacgtcagtc ggtcgcgata ttctggctaa aacaagcaca
    19021 ctggccgtta tccaatacct tggtttaaga gaactcggaa ccagcggaga aaagctcccc
    19081 ctgttgagca cagctaatac ctggagtgca cgccagacct tcagcgcggg gatcactggt
    19141 acgctgaccg ggaacgccga tactgcgacg aaattaaaaa cagccagaaa gattaacggt
    19201 gtggcatttg atgggtcggc agatattact ctgacccctg aagatcttgg cttaacggat
    19261 attgcttctc aagctggtaa cgcagttcag cgttctggcg acacaatggg ggggcagcta
    19321 aaaattggaa caataaatgc ccttcgaata tttaaccagg cctttggcct tatcttcagg
    19381 agatccgagg aatctcttca tcttatcccg acaaatgaag gggagggtga aaatggtgac
    19441 atcgggccat taagaccatt ttctataaac ttaagaactg ggttggtgtc catcggtaac
    19501 ggcgtaaaag ttggcggtgg tattactggt aatttgacgg gaaacgcaga tactgccaca
    19561 aagctcaaga cagctcgaac gatcggcgga gtgtcatttg atggcagcgc caatatcgac
    19621 ctgcctggcg tgaataaaac aggtaatcag aacacaaccg gtaatgcagc gacagcgacc
    19681 aagttacaaa ccgctagaac tataaatggg gtgtcgtttg acggttctaa aaacattgag
    19741 ctaactccaa ggtctatagg cacgatcaac tcagcaacaa tgtcttttag tggtggtgcc
    19801 ggatggttca agctggcaac tgtaaccatg ccacaggcca gttccgtggt ttacataagc
    19861 ctgattggtg gtgcagggta taacgttggc tccccgcagc aagctggcat atctgagctg
    19921 gttctgcgtg caggaaatgg gaatccaaaa ggtattactg gtgcattatg gcgacggacc
    19981 tcggttggat ttactaattt tgcatgggtg aatacatccg gtgataccta tgacatttat
    20041 gtagaaatag gtaattacgc cacaggtgtt aatatccagt gggattatac aaaggatgca
    20101 actgtacaaa ttcatacatc accaacttat acagcgaata aaccaacagg cctgacagat
    20161 ggaactgtat atgtaattta cagttcgcac attaaaccga ccgccacgga tgtcggcgca
    20221 ttaccaataa ccggagggaa tctcaacggc ggtttaacgg ctactggtga gatcatttca
    20281 aaatcggcga atggtctgcg cattgcctat ggcaactatg gattctttat ccgaaacgat
    20341 ggttcaaaca catacttcat gttgaccgat tcgggtaaca gcctgggaac ctataatagg
    20401 ttaaggccgc ttatcattaa caatgccaat ggtgctgtta cgatcggtaa tggactcaat
    20461 gttactggcg gcatcaatgg tagtttgaac ggtaatgctt caacagctac gaagttgcaa
    20521 acagcgagaa acatcaatgg tgttaagttt gatggttcag gcgatatcaa cattaataca
    20581 ttggtatctc gtggccgagt tacggcgtta agcggctcta ctcaaggcac tgctggcatt
    20641 caaatgtacg aggcgtacaa caatagctac ccgaccacgt atggcaacgt attgcacatg
    20701 aaaggtgcga gtgctgctgg tgagggcgag ttgcttattg gctggagtgg tacgagcggt
    20761 gcacatgcgc cagttttcat tcgctcccga agagataacg cagatgcggc atggtctgag
    20821 tgggcacagg tctatacatc gaaagactcc ataccgggcg taaatacaac gggcaaccag
    20881 aacacaacag gaaatgcggc gtctgccacg aaattacaaa cggcaagaac cattggtggc
    20941 gtttcattta atggtaccgc aaacatcgac ctgccaggtg tgaataaaac aggtaatcag
    21001 agcactaccg gcaatgcagc tacggctacc aaattgctaa cagcgcgtac cattaatggg
    21061 gtttcatttg acggttctgc gaatatctca ctgtcaccag caaatattgg ttgcccggca
    21121 tctcctactg gttggcttgt aacaggtgat aatggagctt caataacaac agagcaatta
    21181 gtgactctgc tacgagataa tggtgctttt aatgcaaagg catggatagc gcgttgtgcc
    21241 tgggcgtatg caaatagtgc atccatacca gacagcgaaa caggatgcgg cattattcca
    21301 ctggctggcg cagttattga ggtatttaat aacggcaata gctcaaacaa ttatacgatt
    21361 cgtataacaa cggcaacaac gacaggtgtc tctggcgcac tcactaatgc ggagtttgtc
    21421 tatgtgttta acgggacgag ctattcacca ggatggcgca gagcgtataa cactaaaaac
    21481 aagcctactg cggctgatgt cggagcttta ccactatctg gaggagcgtt aactggcgga
    21541 ttaactgctg ctggcgagat tatttccaaa tcggcgaatg gtcttcgcat tgcctatggc
    21601 aactatggat tctttatccg aaacgatggt tcaagcacat acttcatgtt gaccgattcg
    21661 ggtgacagcc tgggaaccta taatagttta agaccgctta ccattaacaa cgccaatggt
    21721 gctgtttcaa tcggtaatgg tttaactgtt tatggttctg ttggtctggg tactgcaaat
    21781 gctcttggtg gtaactctat cgtccttggc gataatgata ctggttttaa acagaatggt
    21841 gatggcattc ttgatgttta cgctaatagc aatagagtat tccgctttaa gaatgatgca
    21901 gctttttctt taaaaaaatt gctggtcgga gatagtaaaa ctttttcatt atcaagtgca
    21961 aacacatcca ctaagaacgt aacctttaat ctatggggtg cctctactcg tcctgttgta
    22021 gctgaattag gtgatgattc aggatggcat ttttatagtc agagaaatac tgataacagt
    22081 ataacatttg ctgtaaatgg tcaggtgtcc cccgctaatt atggtaattt tgactcgcgc
    22141 tacacattaa aaacggcttg tgtgacaagc gtaagaatgg gatctgctgc cagttataaa
    22201 ccatcaagca atggtgtttc ctggactcag aatctaggaa gcggactggt tatgacaggt
    22261 attattgttc aagaaacagg aagtaattca gctgacaata tcggcgggat ttattatcga
    22321 ccggttcaat attgtatcaa cggaacatgg tacacagcag catcagtata atgagagagc
    22381 atatgaataa ctttaaaaat ttcgcaccat atacgccagg cgaagataaa agagagcttg
    22441 ttgatgcagg agttttattc ctgttggatg aaaacggtaa cgactggtat gaatgtcaaa
    22501 agttattttc ggaatgtaca aaagtaattg cgtatgatag caacaatatc gttgtcagca
    22561 ttacagatga cgcctcaacc ctttggccca taggactatc tgtagcagaa gtggatagtt
    22621 tacctgaaga tgtagatatc gacggtggtt gggtgtttag agacaactct gttgttaaac
    22681 gcatatattc tgatacggag ttacaacagc aagctgaatc aaaaaaggct gccttacttt
    22741 cacatgccga atcagtaatt gtaactcttg agcgggcggt taaattgaat atggcaacag
    22801 atgaggaacg agctaaactg gaggcatggg agcgttatag cgtgttggtt tatcgcgtag
    22861 atacagctaa accagaatgg ccagaagaac cgttgttgtg aagtgaaggc ccgatttatc
    22921 gggccttaac ttttaaccta gctcagtagg ccagacgatc gcattgaaac tggctttatc
    22981 tgttattgtg ttgaaatcta atgcattaac tgcatcaata tagtccagcc aggcgtcaag
    23041 agaagactgt tcatcttcag ataatattct gccgcgtagt aattttgtct ggctaatcac
    23101 gagctgttta ggattgaaag gatgacgccg gaaacttctt ataaagcgtg gaaacagcca
    23161 catcatagat gattgcaacc tgcttacggg ggatgccctt ctccagcaat cgccgcattt
    23221 gctgccatgt ttcttcttgg tatttaggtc aacgtccacc tatacgacct tctgcgcgag
    23281 ctgcattaag tccagcgcgt gtacgttcaa cgataagctc acgttccatt tctgccagcg
    23341 ccccattggt gtactggtgt cgatggagtc agtgagactc cggaagttaa tgcctctgtc
    23401 acgcagctct tccaccagca caactaagtg acacatgccg cgaccaagac ggtctaactt
    23461 ccatacgacc agggtatcac ctctggaaag catacggagt acctttttta atccagggcg
    23521 ctcagccttt ttgccgctcg ccttgtcctc aaaaattagc tcacatcctg cgctttcaag
    23581 ggcatttcgt tgcaaagcgg tgtttgggca tttgttgata tgcgaatgta tccaataagc
    23641 atatgtctcc cttgtatgct aaggatacga ttctagaaga tgtcctgtaa ggaaataaca
    23701 aactgactaa gttagtggtg cattagatgt tatttctgga ggggtatgtt tgcagattat
    23761 gaaaatctgg ctgtagtagt cataacatcc ctactaagtg gaaccggcgt attccttctc
    23821 ggagttagag acgggcgcat ttctgcgtcc ctgctcaatc ttgcgagtga attgtttact
    23881 gcggtaacag ccgggcttgc ggggtatggg gtggcggtta gccaagaatg gcctgaaggt
    23941 atcattttct gcgttgttct gattgccagt aacaacggaa gagaaatttt acagggcttg
    24001 aagtccagag ctagtaacgt cttgaatctc ttaagcgtaa tagcgaatgg gggaaaaggt
    24061 ggagagaaat aatgggtaac tttgggaatt atttcatttt tatcatggca tttgttgcca
    24121 tcattgaccg tttcattttt cgtcgcaaga gtgttgagat tttgagtatt ggtgacgctg
    24181 tagtgaaaga atccgctata gcatttcctg tttcgctacg tgttaagcga agctgggtca
    24241 gcaatgctca aatcgaatat tggttgcaag acctgaaaaa tccatctgtg gttatttcag
    24301 ggaaaacgcg accagttgac gcctcaaaac gcggtgagag agaagagtat ttgctcatcg
    24361 atacgaaata tcttgagcca acgaagtggg atctgaaagt cacattgact aacggtaact
    24421 gccgactgaa tccgctttat cgcattttcc ctatcaatga ctgcatagag cgccagttta
    24481 cgatcgaaaa gcgtgaagga ggctgggatg tcaaataaga ataattatgt tcttcttaat
    24541 tatgatgagt taaacgaaaa ggggctggca aaactcgtca aagaaatcag caaaggtggt
    24601 tacaagatag cgagggtgat ccctgcaagt aatggcagga agaaagatgg gatcatgacg
    24661 cgcacgttta cccttattgg tcttgatgaa cagacaatgg aagttcaggt taacgatacc
    24721 ggtgatatat ctgggatcaa actgaatggt aaaacagtac cgttcaagcc agtaaaaaca
    24781 atgtcggctt tggggcaatc tcttgcggct ttatttaatc gcggagcaac ttctttccag
    24841 aagtcattag ctcgaaaact tgctcgtgca gcaaaaaata ttgatgacga aaataagaag
    24901 cggcagggag ttaaatccaa cgctcagaaa ttagctgaag cgaaagaatc acgtgatgca
    24961 ctccgtgaag atatcgctaa tgctaacgac aaactgtcta aactccagag caagtcagac
    25021 aaagtaatgc aagatacggg taacgttaaa gctgccttgt ctcaggaagt agctaagaca
    25081 cgtgctctta aagaagaaat cgcgcgcctg gaggatgagc atgattaaca atcctttacg
    25141 aattaatatt cagtctactt ttgctgatac gatccccggc tatatgccaa gtcgctggtc
    25201 ttcaaaagaa ttaagcgaag atgacctgat ttttgaggcg gcgaccttag aagatattga
    25261 gcttgcctat atgggcaatg aaattctggt tgtgtctgac gaagctatgt ttgagtccat
    25321 aactacaacc agaattcggt tagctcaaac aatgcgagct ttcgtccgtg cgctgaatcg
    25381 tggcctgaat ggtacgaata ttatggcagg gactgatgaa gccgggaccg atgaaaatgg
    25441 acgtaattgt attggtggtg cgattatcgg tcgtgtacgt cgggtagcta atatccctgt
    25501 tttgaccgcg cagataccgc ttactgacgg gcagagtaca agcataattt tccactctcc
    25561 aacagctgac ggggcaaaaa taaagagtaa cgacgagctt gttgcatttc agtttttact
    25621 taataagcgt aacgtaactc acgttgtcgc cccgattggt gggagagatg tttctttaag
    25681 ccaggtatgc caggcgctat ctaatttgat tgagcgtaac agcgaaaagt ttaagaaagc
    25741 aaaagagcgc caggacaaaa tgaaggcaga tattgagagt tatctcaatg aagcagataa
    25801 actggcagaa gaacggtcaa taacaattga tcaggtggac gttgcgcaac gtgggctgac
    25861 tgaaaagcgt gctgctctta cggagatgca aaaaaaactt gatgcccaga aagccatcaa
    25921 cgaggaatta caagaaaaac gcgataaatt gttgtctgct aaaggtgaaa aaacgaagga
    25981 gcgagcgttt agtgaccagc tgcgacatgt aaaacataat cttgccattg acggaaaaac
    26041 agtgctggat aatggcgctg aagttaatta tgtcacgtcc ggcagtgaca atttcgttac
    26101 gatagttgca cctgaaggta aattcagtat tgatgccagt gctgtcaaag gaggcagttt
    26161 ggcagatgct gcaaccaaat tacttaaagc ctaccgagag cataacgcag ataaatataa
    26221 agttgatgtg ttaccaggcc agcaggaaga ctccgaacca ccacagacag cccccgagac
    26281 gaacccagta tcacaaccag agagccaaga tgtaggtaaa taccactatg cacttcaatc
    26341 tcgcccggct ggtgttggtg ctgtgccgga tggaaataaa gccgtgcttg atcgtcctga
    26401 ccaggctgat cagtattacg gatatgctcg tcacggtatc attacgtatg accgtaaact
    26461 gacagataaa gaagtcagcc agtacgagtt gctctatctt cctgatgaag atgagctgaa
    26521 agattttgca ggccaattgg ttgtgtccag catgtctaaa catattgatg gctatgtgga
    26581 cctgtttggc agtgacctga aaacattcaa ggcgcaagtg aaaattcttt tccgcaaagc
    26641 gtttccaaac gtggcgtatc cacttggtga tggggagaac cttttcatta tggacgtgta
    26701 taacgccctt caaaattatt caagcgaagt aaaaacagag catgtggttg agccagaatc
    26761 acaaccacaa ccagcaccag aacaggagcc ggagccagaa gaagcgggtg aatcagcaag
    26821 tgaagctgat caggaggcag ataaagcgct ggagtacctg aaatccgtgc cggagcagtt
    26881 tacatcccgc gatctgacgg tcatcagtac tgaacttgat catgtacagg aagcagcaaa
    26941 tgctctaatc agtgcaggtc gatacgacga gaacgaagcc actgtgggtg cagcagttga
    27001 ctacctgatc aacattctgg ctgaaattca gcagggaggt gcttaatgac catctctgtt
    27061 ttagaccgcc tgaaattagg taaagagcta tcagatctaa tgcaggcgca gaaaactgcg
    27121 ccagtattgc aacgcgtcac cattggtaag cagattgttg atgtgatgct gaaattgggc
    27181 ctggggactg ccgcgcaacc ggcagcggaa ccgcaacaac agactgatcc tgttgtagat
    27241 gaagtcccta agatagtgac tgacttcctg ggcggtgtgt tcacaaagtc cacacaaatg
    27301 gaatttattg atgcgctgcg tgggatctca aactatgttg gcgagttcct tacgttggag
    27361 caggctaaag aacagaccat aagctgggtg aaagccaacg gttatgccgg gtaatcaaaa
    27421 gggggtgaaa tccccctttc acttctctgt tctcacataa atcacactct ttttacactc
    27481 acagctttct ctatagttgg agtgtatttt gaacaaatca gttacttctg cgctttccga
    27541 ggccgcagat attaacagcg tcattgctct ggtttcttca ttagagagga aagaaacacg
    27601 catggggcga agtagctacg tagtcaccag caaaggcgca gaggtaaaga cggcttttaa
    27661 ggtcgttgat gccagcagtc taatcatttc gaacaacctt gacggtacga ttaacccggc
    27721 cttcccggaa gaactccaac cacgagatcg tacccggcta tccagcaaac tccaggttaa
    27781 ccgtattgcc tccgatttac gcccggcaca attaacggat tccggtatga gcagccatgg
    27841 agcgccgata gttggtccgg acaacgttgt tgaatccggc aacggaagga gtatgggtat
    27901 ctggcgtgcc tatgagcaag gacaggcgga tgagtatcgc cagtacctga tcgaccatgc
    27961 gaaagagttt ggtctgaatc ctgacgaaat ttcgcaaatg tctatgcccg tactggtgcg
    28021 agaaagactc acagatgtag accgcgctca atttgcccgc gattcaaaca ttagtgatct
    28081 gcaagagatg gcagcaagtg aaaaagcgta tgcggatgcg caatttctca ctgagagcgt
    28141 catggcgcta tttaatcctt cagatgatgg aaatctgctg gcgcggtcca atgatgcgtt
    28201 tattcgtgcg tttttgcgcg aaattggcga tacagcgacg gcaggcttgc ttactgccga
    28261 tgggcgtccc acgaaacagc ttatcgatcg catccagaat gcaatttttg ccaaagcgta
    28321 caaggatgaa aggcttgttc ggctggtgtc ggaagagcca gatccggaaa tgcgtaatat
    28381 cctgatcgca ttaaatacgg cagccagcga ttttgcgcaa atgcagtcgc tgtctggcga
    28441 cgctcaccat gacgcagtaa caggcttagt ggacggtata gagcaggtta atggcctgga
    28501 tacacaggcg atagcagcac tccaggaagc aattaatctt gtacgtgaag ccaaagacaa
    28561 cggtcaggcc gttgaagaag tgatcgccca aagggggtta ttcggcgaca gtacaccgga
    28621 agctgaggca ttggcgctat tcatcgtagc aaataatcgc agtgcgaagc gtatgggggc
    28681 agcattcaaa aaaatggcgc aaaaaatcaa cgacgagctg actcataaac aacaggcttt
    28741 gggcgatatg ttcggcggtg gcgatgttga tctgcgtagt attttgtctg ctgtatctga
    28801 tgaaattgag ggtgaatttg gcgaagggaa aggtctgaac tttgctatgt ttgaaaattc
    28861 tacagttcca aataattgcc gtacagaaaa ctaaaccaac cgctgaaatc acatactgat
    28921 tatgctgccg caaaactgga aacaatttgc ggtgattcat ggcaacgaaa gacaaaaaca
    28981 aaggctttct gtcagcattg aagaaagcct tcaacggtgg tgatgttacg cccgccgatc
    29041 cggtcgtttt tacgagcgga catagtgtcg ttgctcgttc cggcctgtct gctttacgtc
    29101 caggcatcct ggggagcaat agcgatggca tgacgagtga ggcagattca atttctttat
    29161 ccgctgaact gcccggcgag cgcctgcaaa agtacaacat cctggaaacg atggctaaaa
    29221 gcccgactat ctcgacggct ttaaacattc acattgcaca tgcgcttgcg ccttcaaaaa
    29281 aaaacggaca ggcattcatc ctttcgccaa aggatggttc cgatgccgag gcagtaagta
    29341 gatgtgaaga gttaaccgct gatttggggg cgatgattaa tgacggactt ccttcatggg
    29401 ccatgatcat ggcgatcttt ggggtgtctt atgtccgacc ttatgctgaa cagggcaggg
    29461 ggataacagg cattgagtcc agttattaca ctctgccaca tttcgtccag gaattttatc
    29521 gcggtagcca gctggttgga ttcagtggtg attacatcct ggatacgcat agtttgcgca
    29581 gagtaataac cgaaccgtgg aatctggttt ccatgaaaaa tccctattgg acgccacagc
    29641 ataaagttat tccggttagc tacggcacaa aagggtactc actgttaagt gatcaagctg
    29701 ataagccgtt aatggagacg cagaattacg gaacttcatt cctggaatac agctatgaac
    29761 cttaccttaa tttatgtgct tcgctcgccg cgctgaaatc aacgcgaaat aatgcagcca
    29821 aaattgaccg cctgattgct cttacgacga acacacttga cccggttaat gcggcgaact
    29881 atacgcgtgg cgtcagccag gcattgaagc gtcatagtga cctggtggcg caaaggtcga
    29941 ttaatgccaa cgctattcca actgtgctta accatctgat acctgttatg ggagacggga
    30001 agaacggcat caccattgat acgcaatcca tacccgcaga tatcagtggt atcgaagacg
    30061 ttatgtttca cctccggcag cttgctgcaa gcctcggcat tgacgcaaca atgcttggct
    30121 gggctgatca gatgagcgga gggcttggag aaggcggctg gcagcaaact gctatccagg
    30181 ctgcattgcg tgcgaactgg atcagacagg ccgcccagcg aactatttat cggcttctgg
    30241 acattcacct tgcttataaa tacggcaagg tttacaccga aaaaaaccgc ccttatgacg
    30301 tgcaattcaa ctcaatgaac actgctattc aggaagagga aaaccgggaa ctggatgcac
    30361 gcgccaactt tgttgctgtc atctcccaaa ttatggacca gatccagaac aacccgaaac
    30421 tggctggtag tgacgcgttt atgcgttatc tgttcaccga gcagttgcac atcgacgatg
    30481 acactctcaa caccatgatc aaagagttta aggcgaatga atcagagcaa aacaacgagc
    30541 atggtatgta cgaatccgcg ccgttgtcgt ccggtgacga tccggaaaac tggacgccag
    30601 aacagttaat aaactttgca aaatttgtga tgagcaatta accggaggga aataatgcaa
    30661 tcactgaaca ctgttacgga tcgcttctcc ctggtagaga aaatccgcaa acacacaccg
    30721 cagaacaatc gaaattacgt tattcagtcg gtgcgagaca cattcaactc gccagaaaca
    30781 aaagagcgta tcgcacttgg tgagatgtat ggctattacg gtcatggtcg ccgggcgatg
    30841 cactataaca aaacgaaaag cctgaacctg ccggaagtct ctgttgtgat ggttgatggg
    30901 aaacctgttg tattggagaa cgtgccatca aacaggacta tcgacatttc gattgacgac
    30961 aacggcattg ttacccatac gcaggaaata ctggatacag acaccgggcg tattgtacag
    31021 ggaatgatta attctggtgc gggtggttgg tcatgggcta catctggccc agattcatct
    31081 gtatccctgg taaagtcttt tcacggcttt gattacgtaa ctgtgcctaa ctatatcagt
    31141 ctggacaaga aaagcctgat gctggaatca gcagaagagc gcgacgcggc tattcatgcg
    31201 gcacttatcg aacaaggttt taccgataac gcggctacgg atcttgttca ccacttttca
    31261 gcaatgaaga atcagcaggc tattttcgag tcagcacagc gtgaagccct tgagtcagaa
    31321 ttgatgctcc ttgaagtgga aaacatacag cttcgagata agctgcgcac tcaaacagcg
    31381 atgatggaaa gccaggggga aaatgcaaag caatgccgcc ggattttgcg tgacgctatc
    31441 caggaaatgc ctgtttttat tagcgcagaa cagcgccggg cgctctgccg tatgcagtct
    31501 gaagatgatg ctcgcatagt ggctgcgatg cttgaatcac tgggggcaaa tgcgacttat
    31561 ggcttgccga tatcaggcaa gaaagagccg gagttatcgc cgaaggagag caaaaatact
    31621 accccattac tcttcgtttc gcgacgggca taaccgtagg atgaaattaa atttctaaca
    31681 tagtgtattt atatacactg ttgattctgt ccgatgtgat cgagtaggat cgcggtcact
    31741 gctccggtag cgactgccaa aaaaagcaaa agccgctgag aagcggcttt ttggtgtata
    31801 aatccactgg catagattta tacggtagat agattttttc acggaactat ctgatgaata
    31861 ttttaaattc agtttcagta actttcaaca cttctgagta taaaaacaac actgaatacc
    31921 acaaaaaaat caaaggtcat cagttgagtt tttttgctcg tcatagcggt cttctttccc
    31981 cttcacatag cgctattatt gccgagttcg ccaacctggc aggggctacc gatgaataca
    32041 tgatccgtcg ctcatatgct gatatgtccg agattacagg acgcagtatt tctactgtac
    32101 gccgggcatt tgctgaagcg acgaagtgcg gaatgcttgt taggcaacat caggtagcga
    32161 ataacaatgc ccaggtgtgt aacgtatatc ggtttacgac acaatttctc cacttcattc
    32221 atgtagcaat ggagacaggg ggtaagcagg gcatcaaatt tgccaacgcc acaaaactgg
    32281 ttaagcagtt gatttcaaag gttcgttatt tttttgaaac tgggaacccc ctgttcattt
    32341 tgaacaagtc cccccatgtt caaaatgaac agccaataga aaataagagt cactctatag
    32401 caaaaagaag agaaagatca tgcgcggttc agccaaaggc ttcaccagca gatagttctc
    32461 aagcggataa tggggcgctg gataaaaaac cagtaatcag ggaagaacat accaaccgct
    32521 gcctggcggc ggcaaaagcg agagctgcaa agcgtcgttc agacgagggg cacgcaaaac
    32581 ggcaggctct gtatcgtacc gctgaaaagc tggcaaaaaa atttgcatgg atacgtagtg
    32641 ccgctaccgc agtgaataag cctaaacaat ccagtgccct ggatttctca atggattatt
    32701 ctggctccca ggggtgtgca accattggtg aagcctttga cctgatgaaa cagcgtggct
    32761 atcggtctga atttgaccgg gaggattggt caatccctgc gggatttagg ggatgacctg
    32821 tgtgcctaca aaacatccca atgatcggca aatgctcact cgatgatttg tattagaaaa
    32881 ttaattttct gtttctaaat cggaatgtat gatctgcatc atcgactgaa gtcatccatt
    32941 gctgaaattt ttagttgatc ttccatgttt tcaggcttat attcatgccg tcgtagcaaa
    33001 ttctgcgacc aggtttgaca gcctgaatgt tagtgcggac aaccgcagat ttccgatatt
    33061 gcggtatttt tgtgtccgta aatcgcgtta cgcccgaatt atggtggggc gtgatgggga
    33121 ggcttcggcc tgctggtttc actaacgcca gtctgtcaac cctgtcacgt cctgccacct
    33181 gtttgacagc gggtagcagg ttgttaaacc tgttagtgag gccgtaacta tggttaatgc
    33241 caatccttgc tcacgtccag aattcatctg gcgtttccac tccctgcaaa aacactgcga
    33301 tcacttcgca attgccgcaa ccgaaaaaga agcccgttct ctgatccctg atcagtatgg
    33361 tgttcttact ggtcgtttct ctacttcccc acaaccaaac actaatccct ggtatcgcaa
    33421 tattaccaat cccagcattg cggaggctca ctgatggact ccagatccgg gaagttgatt
    33481 tatcgacggc tgatatagtc ggtaatgatt ggaccgtgac ttgaagcgtg atgccccggc
    33541 ctggtcgggg cttttttcat gcctcattag ttgaggttgc tgcgtctccg actggtaaca
    33601 gagcggtatt gcgtggttcg ccagcaggcc agcgatagcc agacactctt gatgttggga
    33661 atgcgcgaat attaaccgca tccccctggt tcccacccag gacaatcaga tcgccattgg
    33721 cgcggcgtcc gacaacgaag cctacgtgcc caccgcctac gcgggtaaat acaacgatac
    33781 atccgtatgc cggtgtatct aatttctcgc cccaatccag ataggatttt gccgactcaa
    33841 atcttgttga gcggatgcct acacgttcca gcattgcacc gacaaatgct gcgcaccacg
    33901 gcgtttcatc gtctttaatt ccgccgcgct tgatgtcgcg ccaaaactga acgatttcag
    33961 ggttgtgttt agcgcctttt atttcagtca ggccaatgtg cctacgtgct tcaattagcc
    34021 agcgaggttc aatgtttgcc atattttttt ccggtcatgg gttaataagt aggcaaacta
    34081 tggggggtat gtgattttga cggtagtatc gtccccgtga aaataacatt ctccataccc
    34141 tctcaaccgt accgcatagc ggatttttta cggtttagag ggggtaatcc tttggataaa
    34201 ctacttcatt caatcagtga agcctccagc ttaggcgaac tgattgagat tgttagtcgg
    34261 ttgcataaat tacgtgctgt tgcgaccttt ggcgttaaga aagtcgatgg tgtcggcatt
    34321 caaaaaacac ggcgggcagc aaacaacgcc gcagtagagc ttcttaattc ccttccgccc
    34381 ggcttcgatg gggcgaaatt aactgacgaa cagcgtcaga ttcttgccgg gtataccggt
    34441 gaaggcggcc tgacagatgg tgagggcagc caatacgaat actacacgcc acagtttatg
    34501 gctgaaggta tatgggatct gtttgctgac tacggtattg atggcgggca cgtactggaa
    34561 ccatcagcgg gcacaggtat tttccaggag acaaaacgac agggcatgat aatgaccagc
    34621 gccgaactgt ctccgatttc cggtcgaata aaccagcttt tgcacccgga agacgatgtg
    34681 aatatcgggg cgtttgaggc gctggcggcg aaagacgcaa tgtatgatca cgctgttggt
    34741 aacgtaccgt ttggtgaagg gcgttccggt gtcgccgggc ttgatccggc atatgcaaac
    34801 gagaagaacg ttggcaatta ctttgtgctg cgcacgatcg acaaggttaa gcctggtggg
    34861 cttatcgtat tggtggtgcc gaatggcatg accgatggta cgaaatataa aaaattgcgc
    34921 gataaagtca gccgtaaagc ggaatttttg ggcgcacatc gtatgccttc cggtacgttc
    34981 agcgaatccg gtacagatac cgtggtggac gtatgggtat tgcgtaaaca cccggaaacc
    35041 ttcctggaga tgatccccga cacggatgat tcaacactca aatcggcaaa cgtcctttgg
    35101 gataccttcc tcaaaggaaa atggtttaca accgaaggga agcgatttgt ttacggcgac
    35161 atggaacgta ccagcttccg caataccctg gtggtgaaaa aggacggtcg tgtatccaat
    35221 gagtcgatga aaaccgcgct atctcgtcgc tttgatagtc gcattaattg ggatttgctc
    35281 ggcgtaacta ctcaggcatg gcagggcgcg aaagtgggcg ataaacgcct agtaggcggc
    35341 atctggcatg agtttgatgg cctgaaatgg gtcaaggaca cgacaaccaa atcctccgcg
    35401 cttgatgtaa gtcgatatgg tgtttcgaca ttcggtgatc tgcaaacaac gttccaatca
    35461 acaaacggca ttctggctct gtcatggggg cagatatccg cgatcgcttc cgactatcca
    35521 tcggttatca gtgatgaagt agcggcaatg attcgctttg ctgggaaaca acgcgaaaaa
    35581 gaccgtgagc gcattatgcg cggtgcgctg atcgggcaac ttatcaataa agcgctggat
    35641 aagcgtaacc ttggtgaaaa cgtcgatgat gaactggctg atgccgcacg tctgacggct
    35701 gccgaagttg ctaaatatgg cccaccacac gccattaagc taaacgacat taccgaagcg
    35761 ggcgcgaaga actggctgac attcaccggg aacgtcaatc aggacggtga agcatccgat
    35821 ctgctgtccg gacggcttga tgttagcaaa ggggctgctg gtattgattt cactcgtccg
    35881 gaacaggttg tgacacacct tttcagcgat gttgccctta atcctatcaa tcttgatgac
    35941 ttccgcgagg cgtttaaagg cgaactgcca gaagacgacg atcaagcact ggaatacctg
    36001 gcgaaattcg acgatatcgc tattgatgga tatggttgcc tgctaccgat gggccgtgcc
    36061 actagcggtg atattaaatc aaaagtggca ctgctggtgg gctggcgaga cgcgtccaca
    36121 ggagagcgga aggccaactt tgagcgccag ctttcaaaaa tcgaagagaa acgcacgttt
    36181 acaccgctga acaaagtcac ggtaaacctt aacgcacggt ggttggatcg ccgcctgata
    36241 aaagagttcc tggcagagca gggctatgac gagtttaagt atacagaacc cgaccttaag
    36301 gttgaggacg gcattctggt atctccggac gattacgaag gtaaggacgg ggtatttact
    36361 ggctatcaac tacgaaccgt aaacggcaaa aacgggaacg agttcaagaa agcgaataac
    36421 aaagatggct tcctgaatca gcttgagaac tacctgaacg gtgttaaacc gcgcggacag
    36481 aacgctaacg agtacctgga caaaatcgcc cagcttgaga cgagttttaa cgactggtta
    36541 agaactcacc cgcaggcaga ccagatcgcc cgcgattata acgacgcctt taacggttat
    36601 attccattta cccattcaga cgcacccctg gggcttgaag gcatcagcgg gaaacgtata
    36661 ccgctttctt accagaacga agaagttcgt cgtctgtcgg aagatgggcg cgggattatg
    36721 ggattcggaa ctggtttggg taaaacgacg accgcgctgg cactggaagc ctataacttt
    36781 gaaaccgggc gaaccaaacg tacctgtatc gttgttccaa aggccgtata ccagaactgg
    36841 tatcacgagg cacagagctt ctacagtgca gatgccttcg ccaatatgat gtttatcggt
    36901 ctggacgaag tgcgcgatgg tgacggaaat attcagactg ccccagtgct cgaccaggac
    36961 ggcaccccgc gacttgataa cgacggcaat ccgatcaccc gtaatgttgt taaagaatcc
    37021 gccagtgccg ttatcgctca acgcatgaac atgatcccat cgtcgaactg gcgaacggtc
    37081 atcatgacaa aagagcagtt cgcatctatc ccgttgcgcg atgaaaccat cggagaaaac
    37141 tcacagcagg ctgtctttaa tgccgccgaa atggggcgtc ttgacctggc gtcaggcaag
    37201 caccgtgatg cgcagaagaa gaacaagatt aaggaccagg ccgcgaatac cggtacagcg
    37261 aagaagcaga atatcccgta ctttgaggat atgaacttcg atagcgtaat tgccgacgaa
    37321 gggcacaact accgcaactc ctttggtgcc gggcgtgaag cggggcaact ggcatattta
    37381 cctaatccgg cggtatccaa aatggcccgt gacatggctg taaaagctgc gtacatgatg
    37441 aaacgtcaca atgggcgcgg cgtcgtaatg ctgacagcaa ctccgctggt taatagccct
    37501 attgacgcct tcaacatgct gtcaacggtg atccctcagc acgagtggat gcacatgggg
    37561 attattaccc ctgacgactt tgtgcgagtg ttcggtaaaa cagccactgt tcaggtccag
    37621 aaaatttctg gcgaagtgga agagaaacag gggctggtgg gcttccagaa ccttgatggt
    37681 ctgcgtggca ttttccaccg ctggacaacg cttaaaacgg cttccgatgt tggtgcaacg
    37741 gtaaaaatcc cggatatcgt cgaaaacacc ttgcagatcc caatgactcc agagcagcaa
    37801 gcagcttatg aagagcttcg taaacgcgcg caggagttaa gtcgtggtga tgacgtcact
    37861 gtcgatgatg aaggcaatat cactggcggg aaaccggatg atttcatttt ctctatcatt
    37921 cgcgacatgg ataaggtcgc tatcgacccg gatctttacg ccagcgctat cacattccag
    37981 ttccctgtag aacttactga acaggtgaag tctatagcta ataacctacc aaaagtggct
    38041 ggtgggaaag cggcagacga tgcagaagaa gcagaggagg atgcgaccgg aggcctggtc
    38101 agtacccgta ccagcaaggt tgtagctaca acatttagtg agcatccaaa tcacgtcgaa
    38161 ttgcgtgcca gcattgacct ggaggctgaa atactcaagg caattgctga tgcaggcatc
    38221 gacatgaaac aggtgtcaca cccgatcccg cctaagtatg ccgcacttat cgagaacctt
    38281 cgagaagggc ttaagaacgg taagcaaatt atctttatcg acgagaaagc ccagcaccag
    38341 aaactacgtc gcatcattgc cagtgcgttg caaatgccag agcaggagat aggcattatc
    38401 aatgctacga ctgttagcca ggctggtggt gttaagctga aaaaggtcaa aaaaccgacc
    38461 gaaccgacgc caaacaaaga cggtgaatac aaagaaggcg catgggaaac ctactacagt
    38521 aaactggccc aatatgagga ttatctctct gctaaaaatg atgctggcct tgaggggatg
    38581 gaaggtattg ctgccgacta taacgaaggg cgcacgcgga tcattatctg taacaagaaa
    38641 gccgaagtag gtatcaacct gcatattgga acgaccgata ttcaccacct gacactaccc
    38701 tggactcctg ccagtatcga ccaacgaaat gggcgcggtg cgcgcgtagg ttctccgcaa
    38761 gagaaggtta atgttcacta ttattgtggc aaaggcacat tcgatgactt ccgtctggat
    38821 acgcttaaac gtaagaaaga ctggatcaag atggtgatga cctccgatat gtcagagatc
    38881 gccaatggtg atgcggatga cgctgatgaa cgcgccatta tgctggcggc aaatccggaa
    38941 gaacgacgcg caattatggc tcgtcagtcg aaagaacgtg aggaacgcct gcgacttaaa
    39001 gcgcaacgcg aagccaataa tgctctcgat aactacctga aagcggcgaa tgctgccggg
    39061 aaggatatcg gcatgatgga ggcagaactg aaaagcgcga tggagcaggc gcaacgatac
    39121 cagagtgatc tggatggact gattaagagc ggcaccaaca aaaacggaca gaaatatacg
    39181 ctttcagcac taagcaaagc taaaaaaaga gtgcgtgaat tgcgatttgc aatcaccagg
    39241 gcgaaggacg cggatactgt tatgaaacgc tctcgtggtg atgtggagcg tgctattaag
    39301 tctggtgtgc tggatatcag tatcgatgtt attcagaacc cgcaggagta tatgcgcact
    39361 ggcaagaaca tcctgttgca taaaggtagt tactaccgtg cagtcattga tgctgaatac
    39421 gagacaacgg cgattgtacg cgtgacacaa attgagggcg aaaaagcgca atacacctgc
    39481 cgcgtcgcct ggctggatag agcaagtcgc cactctcgtt ctcctggctc aaccatgaca
    39541 ttaccgtttg actcagtggt tgaagcggta acatttgaag agggggtggc tgaatcacga
    39601 gaaatagcgg cacgtggtgt tcaaagccac cagctttcaa cctctctttc tcgcgatcaa
    39661 ttctatgacg ctattcgtag cggtgttatg cgggtaactg ggagagatcg tggcggttgg
    39721 caaggagcac cggatgtaaa ctattgggct tatcgtaacg ccaatggtca gattcaaatg
    39781 gcctttacct atggcgggat gattggtcaa aaaattagcg catctggaag tgacgagata
    39841 gcacctgaac aatggattta tcctgatgta aacgacgaag cattaaaacg cgaagtcgcg
    39901 aaaatccaga caggtgataa cccacttcgt atttcagagg cagaaggttt tctccgtgca
    39961 ttgtttggct tcgattatga gcaaggtatg gaggcatggg gcgctcaggc cactatggat
    40021 gatgtggtca aggcgttcga tggctggatg gcagggcgcg atctctccgg gcgttcactt
    40081 gaaaaagtga ctcaggaaga tgtccgcagc ttgttccgca agccaaatgg agaaggcctg
    40141 gaaacgtact ggcgaggcgt gctttctttc cgcgatttcc aggggcgcat gaaagccttc
    40201 accaatggtt cggagatttc gcagatgttc gaacaactgc gaacgtccaa aatcacaacc
    40261 aaaattgaga aaacacgcat ggcgctaaat gcatggcgtg atgcgctgtt tgatcagtac
    40321 aaaatgcaaa gtgatgcaga tggttgggcg tcacttgcct cgttggcaga tcagtcagtt
    40381 tacagtgcgc aactaagcat ttctaatgcc gataatccgc ttgaaacatc tgcaacagtc
    40441 tggattaaag cgggggcgtt aattcatgca tttgaggata aaagcattac ccgtgatgat
    40501 ttcgcagatg cagatagctt gaatcgtctt gtcgggatgg ctatacgcca tgctaacgcc
    40561 ttaaaagcgg gcgggtatgt ggaagagttg cctgatgctc tgaaatctgc aacgtgggat
    40621 gactttgtgt cgcttaaaaa tagtggcgct acggagtcag agattgctga acgtcttgcg
    40681 gcggctaaga ctgaacggga agaacaggct gatgctgctg agaacaaggc tgacgaggca
    40741 gcaaatgatg attacattat cgtggtaaac gataagccta ttcgcgccaa agcacgtgtc
    40801 cgcggtcgct ggtggagcgt aagtgaagac gctggtgctg tttatctcat tgcagatatg
    40861 cccggatctt catctattcg caacgcaaaa gatgccatca agaaaatcgg tgggcgtttc
    40921 tggaacttcg aagttaaccc ggttgccgat gtggactttg accgtccggc ctggatggta
    40981 tcgacgcgct attcaattga tgaagtgcgt aaaatcattg aagcggcggc ttaacagata
    41041 tggagcggcc tcgaaagagg ccgaattaaa atgacaacat tgatcgacac agtaaaacca
    41101 acggaatcct accttgagga cattttgccg caggcgctca atggcaggag tgaagaggca
    41161 tttctggatg catatctgaa tggcatggtg gaaaggctga aacgagatcc acagctttat
    41221 cacctttatg ggccgtggtg gcctgcgctt aaaacgttat tgctggagcg cggcgacata
    41281 tcatttggac aagttgtaga tagtgatgtg gcagagatct acaaaatgag tcgcccggcg
    41341 cttacggttt tggctgggca tctgtattcg agcgatcgcc tggaaaatga cgcggtatac
    41401 aatcctgttc atgctctgga agtcgcgctt tatgctgatg atacagagcc atacgtatac
    41461 acaagttacg acgagtctat agagaaatat cgaatcgtgg ggtagccatg cgaaagaatc
    41521 gtaggtttac gatcgacgac ttaaaagcgt actcacaagg gaagggatac gcccttgaat
    41581 accaccgtta taagcgagta tttaccctgc ggcatataga aaacccttcg aaatggggat
    41641 ggatttattt tccgcacact gacgataagc tggtggggct tgttgatgat ttatcctatg
    41701 aaggatggat gattgctatc gacaaggcgg ttacgggaat taactaaccg gataaagtaa
    41761 accattaaaa ataacaagtt gggtaaatga catacaattt acccggcttg ttgacccgca
    41821 tcaccattta ttctaaaaac aagtccgacc tgttgcattc acctatctct ttagtagtat
    41881 tcccctcgat tttgataaag ctaacgatct tgttattatc gtgttcatga ttttaggaat
    41941 tttgtgttag aaaattgatg cgaagacgca ggcatcatag tgcgtattct gaaatatccc
    42001 cgcacgctgc tgcactgaga gagttagaaa gaaatcctga cttattaaaa cggaattacg
    42061 aacattacga acaggttcgc gttctggatt ggctgtatcg caacatgcga tacgtgtatg
    42121 agcacacaca ctcaacaccg aacggcggcc tgagaggcaa aaggacagcc attaagatgg
    42181 tggcagaagg tcagaagaag ggctatccgg acctttctat tgaccttgct cgtggtgggt
    42241 atcacggaat gcgcattgag atgaagcacg ggagaaaccg tctgactccc gaacagctcg
    42301 tctggatgac tcgcctcacg gaagcaggct attactgctt tgaggcgcgc agtgccgatg
    42361 aagccataaa agctatcacg gaatatgtaa atcttgatta aacggagaaa tcgttttgcg
    42421 tttacttaac gtggctgaac ttatccctgc aggaactaat gctatcgctc ggcgtcgctc
    42481 atggcaacag gctctatgta ttgagatctc gaaacgtatc aatggaagtt ttgaagctcg
    42541 caatattgtt actggcgata aggttcacat aaccccggaa agtgcaagcg ctgatgattg
    42601 ggagtttgta cattgagcaa aaaatattat gtgagtctgg cgttcgctga cgatgcgggg
    42661 aggacgcgga gtatcacgtt gagcacaccg gttaaggctg tgacagcgcc gttaatccgt
    42721 gaagctctca gagagctgga attgggtgaa aactcggcac tgttgtcggt tagttggtta
    42781 gggaaaatgt cagagaaaca atacgtggat ggagttaccc caataacagt aatgaggcta
    42841 ctttcattgc tgcaatgggc catcgtacct gtatttatcg cgtatcttat ttatgaggct
    42901 gcaacacagt aattgcataa aaacccgcca attagcgggt tttttgttta ttgcatcttc
    42961 cgataccgtc atcaaactaa taaaatatgt tagaaaacta atttaacaag gtaacgggaa
    43021 cagcaatgag tcaacacact gatgcttcta atctggaaat tatctcgaca gcaattgaaa
    43081 cgctgcgcac acaaatcgct cttatacaga aacggaatcc gggtgatgac ctgtcaaagc
    43141 gactgcacga gagtgtcatt gccactacag ataacctggt ggcggaaatc aacaagctgc
    43201 ttgatgatgg ggcagttgat tacaataagc tggtggatca gtttgaggaa taccaacaag
    43261 ccgttaatga tggcttgatc cgtttttcac aagtcacagg cgtatcagcg acagttgaaa
    43321 gcctgggtga tgcagttaat caatttgccg tgaatatgcg taatgagatc ggcaatctgg
    43381 aagcgcgtct tgaacaggca aatacactgc gtaaatctgc cgaagccgat ttgaaccgtt
    43441 acaaaaaaga ctatccgccc agcctgacaa agcggctgga tgttgcggag aaggataacc
    43501 gcacgctgaa aagagagcgc cgggaactaa aagagcgttt aaccaagctc aatcagcaat
    43561 gcattgatta tcaaggcgaa ggcgtcacac tgcgtaaaaa gttggctaca gcacagagca
    43621 ttatcgaaac attaaagcga gagtgctcac agcttggtca cgatctgaac cgtgcttgtg
    43681 gcatgggaca aagaccagag acatttccac ttatgtatga tgggcgggat gccattgcct
    43741 acatccatga gtatccgcac ggcctggttg cggaaactgg gcagcgtggc gaagcactgc
    43801 tgacggctaa ttaccatcaa caaatcagaa ccaatcgcct gttaacgatg gatgtgatcc
    43861 catcggtatg gggaacgccg ctttactatc gcctgccggg cttcgaaaag gactggaata
    43921 ccgacataga cgaatgtctc gcagataaaa ttatggcgta cctggagacg gattttccgc
    43981 gcttatatcg ccggattatg gactctaagg atgcgccaat cgatgaatta aaaatgcgtc
    44041 cggagacgct ggaggcaatc aagcagacgg agtttgatac tgtattcagt gtggcctgca
    44101 ttccaagctg tttccatgaa agcattccgt tcatgcaagg agatcgtcgt caggaaatca
    44161 ttgacgcttg ccgggtatgg gcgaacgaat gggataagaa gaatgggggg gtagaagatc
    44221 tttacgggaa ataatatgtt agaaatctaa aattacgatt cgaatgtatt gattgtgaag
    44281 gtaacttaac atagaatttt ccttgctggt gggcggcacc cacgtttcgc ttgctgggct
    44341 tgatagtcac ttattggtta ttgttcgccc accagcattt aacaaattaa agcgttagaa
    44401 aagtatagta atgcaagagc acgctttggc accgtgcagg ccaaagttca gcaggtttag
    44461 tgcggaaagt ggtttcagag agagcacttt gcggagtaaa cgacagtcca tgttgagcca
    44521 cggaaggtct ttttaaggtg ttcattgatg atggtccggc agagagtaac ggtacatgct
    44581 gcatctaatc atcaatgcac atcttcaaca ttaaggagac tcagggcaaa aggtaaccgc
    44641 cctatgcctc cttaatgttg cggtaatgca cctatgcgga tgtggccttg cattgtgtct
    44701 tgaaagaatg gggtaaggcc ggggatatcc ccagggggag gcacccccgc tgcaacgaac
    44761 agcctcagac ggcagtcgag tgatgggaac gtgcaaagac tttaaacctc gttatggctg
    44821 gcgtggcaaa cgcgacaacc gagacagagc ggtgacgggc ggagagagtg ccgcatcaag
    44881 aaagaagccg acttgtgatc cctttcagcg ggcatttgaa agtgaatcca gttcaggcag
    44941 tcggcttctt tcttgtgtga tacgtagcgt atttgcccat cttcgggtgg gcttttttag
    45001 ggttttcgtc atggttagcg actttgcggc ggtttagaaa ccgaccatta aagtaaatgc
    45061 aaacgatgat ctgatgatgg tagcggccta agaagcctga cgccacgggg tatgagtcgt
    45121 cccccgtcaa aaaatcgacc gcagagtgtc cccgtctgtg tattagggaa cggggaggca
    45181 taacaggcaa gggcgctggt gtgattaacc agatgaatga gaagggtcag gtctttctgg
    45241 tcagcgccct tacctgttac gtccctcccg cgtaacagcc attggttaat ggctttctgg
    45301 gataatgtct tgcaacgggt atatcccgtc atgctgaagg cgctaatcac gctggaagcc
    45361 agggttatgc atcccctgtt accgaattgc agccagggcg cggtgcgccg aaaagcatac
    45421 ggaggtggaa gccctcgccg gagacgtacc cggcaagtga tggtgtagct cagcggtaga
    45481 gcagttggct gttaaccaac tggtcggtgg ttcgaatcca cccaccatcg ccaatttagg
    45541 ggagttagtc cgtaggggca gcggggtaga ctgtaaatct actgtcattg cgactcgggt
    45601 ggttcgactc catcactccc caccaaattg ccggtttagc tcagttggta gagcgcctgc
    45661 cttgtaagca ggatgtcagc ggttcgagtc cgttaaccgg caccaacaca acaggtaagg
    45721 gtattttgcg acgtcggaga tcgccgagct tggcagaggg ttcgaatccc tacgaagtac
    45781 ccttaccgtt gtgatgaagt gcagctcttt gaagcaacca gaagataagc atctggcttc
    45841 acaacataaa ccgcaggaac gaccaataaa cggtagtccg tatggagaac accccgttga
    45901 ggaagaagcc tggccggaac cgtaaccggc actacaacgt tgagaacatt ggcgtaacgg
    45961 ggtcatatcc caatctatga ataaaggtcg cgaggcagcg tgacaaccag tgttctcaac
    46021 attgtggtga atgcacaggc tgatgtgccg caactacagt agtgcgcgct ttgcggggct
    46081 tgctacaacc ctgtgtcgga gttcagcacc gaccatcaca gtttgattct ctggcatgag
    46141 cataacgctg aaataagtcc agtctggtgc ggcccgatca cccgccgtta gctccacgaa
    46201 acggagcgca caacaggtaa gagcattggg ccgataatcg tgaagagtcg gcgagcctgg
    46261 ttagccaatg ctctttccgt tgtggttgat gcgcagactg atgcgcggaa agaaatgccc
    46321 cagcgacaca cgaggcgagt tcacacactg caatgcagtc agtagccggg gtcgctaagc
    46381 cggagatcag taccggtaac cacaacaatt ggagagtagg gagcatggtg ctcaagcggt
    46441 cttgaaaacc gtcccattgc gcaagcgatg atggttcgat tccattactc tccgccagcg
    46501 caacgttaag agtatttggc taattaagcg aatgccggaa gcagaaccgg atcaccaaat
    46561 gcgtacaggc gtcatcgccg cccagccagc caagtgctct taccattgcg gtgaatgcgg
    46621 ctaagcgcac gcggaacagt taaaacaatc ctccgtagtg gttaaatcaa acatcccggc
    46681 gttaattgtt aactggttaa cgtcacctgg aggcaccagg caccgcagct tttttattcg
    46741 ttgaataatg gagtgagagg atgcagaaca atccgaacaa atgtcgaacg ctatgggtgc
    46801 ggctatatat ttatgccgtc ctctgtttga ttgtgtcact ggttctgtat gtttggcttt
    46861 tgccaaatat gatctcatct gacagcacaa tacttgtatt gttgggagtc cttctcgcgc
    46921 tcatttaccc ggcttttgca gtagtctttt ttcgtgaaaa aaccaggaaa ttgattaatg
    46981 aaaaaaacgt tgattagtgc agcgattatt tttggttctt tatgtctgac cggatgcgac
    47041 cgggtagaac caggcaatgt agggatcaaa gtaaataagc tgggggatga taaaggtgtc
    47101 ggcgaagtag ttggcgttgg tcgctactgg acaggctgga acacagaagt ttatatcttc
    47161 ccgaccttta agcaaatgaa gacctatgat gatccgttca gcttccaaat gagcgacggg
    47221 acaacaattg gttaccacat tggtgtagct tacaaggttg atccggcaaa agtcacaact
    47281 gtatttcaga cctaccgcaa aggcgtggat gacattaccg acaccgacct gcgccagaag
    47341 attgccgacg cacttaaccg actggccagc aaaatgacca ccgacaaatt tatcgacggt
    47401 ggcaagtctg aactactgga tgcagctctt aaagacatcc aggaagaaat gacgcccatc
    47461 ggtattcagg taatgagcct ctcatatgtg ggcaagccgg agtacccgcc aaccgttatc
    47521 gacagcatta atgccaaagt cacggcgaac cagaaaactc tgcaacgcga gcaggaagtc
    47581 aagcaacgcg aagcagaagc caacatgctg cgcgcagaag ctgccggaca ggccgatgcc
    47641 attcgcacaa aagcccaggc tgaagctgat gccattcgtt tacgcggtga agctctgcgc
    47701 cagaaccccg gcgttatgga gttggaagcg atcaacaaat ggaacggaac gctaccgcag
    47761 tatatgacca gtaataccgc tgtaccgttt gttccggtga aataaccaaa tagagaacat
    47821 gatggaattt tggacgtttg ccgacaagaa cccttggtgg acatttttat ttctgctggt
    47881 ggttgcatat ggggtcgagc aagcagcaaa agccttacgc ggccctggca aaaagcgtaa
    47941 gcggaattaa cagtaatctg gccctttagc tcagtggtta gagctggcga ctcataatcg
    48001 cacggtcacc ggttcaagtc cggtaggggc caccatattt ggttgtaaca cggcgtatgg
    48061 cacatgcgtc gttagcggtc tggtgacgtt aaaggggtta ccttttcccc tagctcaggc
    48121 aacaaaccag gtagccggaa tgtgcaagcc ccgttcatat cgtcggaccg aggactcacc
    48181 accctggcga ttcggtgtga cagccggaag agtacggcgc acaacaggaa aaggcgttta
    48241 attaacgcga gcgccgtttc cgttgtggta attgcggcta tgcgctcgtg acgaagccat
    48301 tttcattcac tacgttctga taagtgacgt cgccaggagt ggctaacctg gcaggtggag
    48361 gcaccaccgc cacaactcct ttcaattcat catatagccg ctcaggctgt aacccttaat
    48421 taatacgaag tttcgacatc tctatcggtt taaccgagag atggtcgcgt gtgtaaaaag
    48481 gagacgttat gttaatggcg aacgataacg catatgcaga agaagatctc attttgagtg
    48541 acttcatagg gaagcgggaa cgctggaccc aaaagcgaga ggaactttac gcctcattag
    48601 ttcgcaaagg cgtcaatatc gaaaccgcac agagcggcga tatgacagtg gtaagcgttg
    48661 gattgcacgg tgtaagcgtg tcagcaatca atcatgagcc atacgttgcg ttatccgagt
    48721 caatggtaag gttagttaag ttcctgaagt acacagaagc gaataatgta atcattggca
    48781 aaaagaatat ccctttttcc tcggcttttt actggatgat gaaagggctt gatgcccggc
    48841 ggacatcatg gcctaaaggg agctatatat cgatgttccg tggcagcatt ggcagcaaag
    48901 aaaagctctt cgaattcttg ccggaagagg cattcgatat tgtggaaggg tgcgatgtga
    48961 tggtgatgcc tcgcctggta atgatgaatg gtgatttaca ggcgcagaca gactggtttg
    49021 caactggtgt ggatattatc gcgactgact gggaggcttt ctgatgtacg ggactaccaa
    49081 attaagcact cagcaggcca ccaatatgga gtggtctatc gctaactgta agatcgtgtc
    49141 atgcaatgcc acgcgtactg atgtgggcca taaaagcact ataacaggct atctggtaat
    49201 gaccaccagg gggatgaggg ttagctttcg ctggaaagca gagcaagtaa cgccattcag
    49261 agagccatca atgccgctgc aggttgagca ggattatcta tgtttaccag aaatagatgg
    49321 cggaatgctg gtggagtctg atggtagtaa ggctgatttt gaagccaatt tgaagctggc
    49381 acaggccgta atcaatagtt gtcgcggaaa gtggatcgca aaagtgaaac atgttgttcg
    49441 tttgtctcgc tggtagcgtt agatatttag tattaatttt ctaatacaat catctttttg
    49501 ccagtctata caattttaac attctcatta tcatcccctc ggtcatttcc tgcccggggg
    49561 attaatggaa caaatcagca gcgcagaaat tgcggatatc atgattaggg ctgactgcta
    49621 tctgacagtc actgaaatta ccattctcgc caaagaaaaa taccctcatc tccatgtctc
    49681 acgagtaagt gtaactaaca tcattcgtca ttttgttcgt tcaagcaggg caatctgtga
    49741 gcttgatgat cgcgtttacc cacgaaaata ctggttgcat ggcctgaacg gatatcagtt
    49801 caaggtgcgt gggcgaaccc ctgaatacgg cagtttactg gttaaaaact gtagcaggaa
    49861 atcagtcgaa caggcgcgaa aagagcaacg agagctggtg gacatggcga ataagctgtg
    49921 gaatgccgcc gttaaaaagc gtggtgttgc tttatgagcc tggttaattg ggaggagcac
    49981 cgcgcccgct ttatagcgtt gcgtgaagaa aaagggatca ctgtaaagga atactgtgag
    50041 gagcatggcc ttagcttcaa tacagccaga aagcatctca atatgaaaaa aaatgaggtg
    50101 cggtcgcagg taaagacaac aaaaaaaagc accaaatcac ctgaaaaaaa acgggcagga
    50161 agagcaacaa aaaagcagga agagggtgca gaaaaaacaa aatttacaga aattgacaat
    50221 tcgcagggcg caggttcttt ccgaagtatg ccgagaaaga aaacttcgga tcatgaaaat
    50281 aattcaaata ataacaatga gataaaagaa tccgtcagga gatcattgcg cgaaaaaatg
    50341 gcgaaaatga tccccgaaga agataaaagc gccccaaaaa ttgagggatc ttctgcaatg
    50401 atccctgacg gtgctgtgca gcgtgccaca ttgccaacta cgaatgttgc tcgcgatatg
    50461 atgaagaacg gcgcagaaga acacctgcgg ttagcaattc aaatggcgca agagcgcgca
    50521 cttcagtatc aaagcattgt tgatcaggag gccgaacgtc tacaggcgga aatagacacc
    50581 ctgggcgata aagagccaga aggaatgcac cctgggcagc gccttctcgg tctaatcagt
    50641 gacgcggcct actacatgaa tgattttatc agtaggttgg cagctatata tcagtccgaa
    50701 caaaagctgc gacaggggga tgaaaagctt cgtcagagcg ctcgccagca agcattcaaa
    50761 gaggctgagg ccagagaaaa actcgaatta gcacgcctac aggccgaaca gcgtggcaaa
    50821 gagattgaat atcgcattgg cgctgacgca cgcgcagcca gagttatcgc cgccgctata
    50881 cgtatgcgtg agcgcgagga actggatgat atcggtgttg ctgaatacat cgagcgccag
    50941 ggggtcagcg tcccggctat cctcgcggcg cgcgcggcga aagctatcac tcttctcgaa
    51001 ccacctgttt ctgacgtcaa tgatgttgat gatgaacagc tggacaaaga ggcaagggag
    51061 tttgcaacgc ttcaggctaa ccatccgcaa tggctggcag agcgccgggc ggatgtggca
    51121 accattgttg aagaattggg gtgcggagat tatgaccgca atggcgagcg taaagctgga
    51181 gaattcgagg ccaacgacga agagctggat attgaccctt cggcaacggc tgaaatttac
    51241 ggtgattatg atgcatctga tgcagggtat gacgccggag atgatgatat cgcgatagaa
    51301 ccgccggagg atgattaatg gctggcgggc gcaaggttaa atgcgtcacc agagatccac
    51361 gctggcgcga tatggtaatc aaataccgct acaactttac ccaggctgtt gtcgatattt
    51421 ttgggatgtt cccctccccg cagcagcagc agatcattca gtccgtacag gaaacgggga
    51481 gtaggactac cgtcacgtcc ggacacggaa cggggaagtc gtcccttacc gcgatgttgc
    51541 tgttgatttt tatgatcctg ttccccgatg cccgtgtcat cattgttgct aacaagatag
    51601 gccaggtaaa aacaggcgta ttcaaatacg ttaaacagta ttgggcgaat gcagttaagc
    51661 gtcatgggtg gttgcagacc tattttgtcc tctctgacac catgttttat gagcgctccc
    51721 gtaaggggat ttgggaagtt ctctgcaaag gttatcgact cggcaacgaa gaagcgctgg
    51781 cgggggaaca cgcggcacat ttgcttctaa ttctggatga agcatctggt atatctgata
    51841 aggcgatcgg cgtaatgacc ggtgctctta ctgaagaaga taaccggatg ttgatgctat
    51901 cccagccaac aaggccaagt ggttatttct acgattcgca ccattctcga gcaaaaaccc
    51961 cagacaaccc gaaagggatc tggacagcaa ttgttcttaa ctcggaagaa tcaccgttcg
    52021 tcactccaca attcatcaag gagaagcttc tggaatatgg cgggcgcgat tctattgagt
    52081 acatggtcaa ggtgcttggt cagttcccac gagaaattaa cggctatttg cttggtcgtg
    52141 atgaatgcga tcgctctgct cgccgcaagg tgttgttgga gaaaaactgg ggatgggtgg
    52201 caacggctga cgttggtaat gggcgagata agtcggtcct caacatctgc aaggtatcag
    52261 gtcacaggga taagcggcgc gttgttaact ttaaggtaat ggagatgcct ggcactatgg
    52321 acccattggc ctttgctgac ttcatatata acgaatgtac gccggaaaaa tacccgaata
    52381 taacaatcgc ggttgatgct gatggttttg gttctgatac gtgtgcgcag ttggtgcgtc
    52441 gtggtgcgaa cccggtacgt attcggtggg gaaaacccat gtttgcgaac aaagacaggg
    52501 agcgatttgt taatcagcgt gcctacgcaa atatcatggc gcgtgatgcc ataaagtcag
    52561 ggcgtatgcg gatagacagt gaccctaaaa cggcagagca agcgtcaaaa atcccctttt
    52621 taatgaatga agaagggaaa atggcgatga tgcgcaaaga gcacatgcgg caaaagctaa
    52681 acatcaaatc gcctgaccga tgggatacct actgcttcac tatgctggtg gactatgtgc
    52741 ctgctaatga agatattggt gccgaaatgg caactttccg agatcaggtt ctggcggata
    52801 tcgaaatgcc ggatctggat atataaagcc ccgcgatgcg gggccggttg tgattaccag
    52861 agcttcgcgg cgtactgcgt ttgggggaat gtgtatccgt aacgttcttc gattgctttg
    52921 ccgtattttt tacgagcttc attcagttta atgccggtca ggtcgtctcc agaggccatc
    52981 attacgtcta acaattccag atccatttta tccagccttg ccattgcttc acgtgatgta
    53041 cgtatcttac gctcaatgat atggcgaata gccggatcgg catcctccag catcttagcg
    53101 gatttctgct taaggctttc attgcgaata tcgatgttcc ttaagatata cgacttcgca
    53161 acgtagcttg gctggtgttt ttccaggtca cgaacacgat ataagttaaa atcgccgaga
    53221 aggctgcaag gtaccgattc gacgccagaa taaattgtaa tgctccggcg ttcaccaaca
    53281 ttattgacaa cggggatcgt tgtcttcggt agtcttgcga aaaccaatgc gccatgtgcg
    53341 ccaactctaa agcgagaaag ggcattactg ccttcgatgt ttgttgtcag cacaacatct
    53401 gtatatgcct ctttacgcgc ccggtagatc tcgccttcag gctcagcttc aaagaagcgc
    53461 tgttcttctt caagagcacc tacgatttga gaaaaaaccc tatttttcag gcttttcttt
    53521 atgattttgt cgtatttttt tagcaattgt tcacgtgtaa atgcacgtgt tgttgtagcg
    53581 ctttgcacaa cgacatgcgt gctttgattg gtgtcctcaa tgatgaatgg gatcggagaa
    53641 tatacggact caacaatgtt cgacgctttg ccgtcggcat cgcggcacat gtcaacgaag
    53701 gctttccatt cagcaagaca tttttcagct tcttctaata tgttttggtc atgcgttaat
    53761 gcaacatggc ggaattcctc accagcataa ctggtatcat ggaaaacaga gtttgcgacc
    53821 accagctctt tccaccgttc tgcggtttgc aggaaccgtt tgtactcttt ctcgatcgac
    53881 ttcatactca tcattcctac gcgatttagt tttctaacat aaaattacta tgacaaattt
    53941 atgtcgaata acagagcgag taaaggatcg gactatgatt tttttgtcat caacgttaga
    54001 aaaccaaccg ttgaaaccac acttcgcaaa ttaaagacca tgaaggcaac gttttactgt
    54061 ccatcatcaa tctatgatgg attacaaaaa aatcggcatt ttataacttt aaataattgg
    54121 cattatttaa agttagacta taatcatgtg tagatgaaca gtattgacat cactgaaaat
    54181 acgtgcttcg aatcaaaggc ttgtattttg aaaattaact tatagctacc ctgtcatttt
    54241 tatatttttc gcgtagcgtc atctgtatat agaggtgaaa tagttccatg agtgagttga
    54301 ttatctctgg cagttccggt ggttttctgc gcaacattgg caaagagtac caggaagccg
    54361 cagaaaactt tatgcggttc atgaatgacc agggggctta tgcgccgaat actctgcgcg
    54421 acctccggtt ggtgtttcat tcctgggcgc gctggtgtca cgctcgccag cttgcctggt
    54481 ttccgatctc accagaaatg gcccgcgagt attttcttca gttgcatgat gccgatctgg
    54541 cttcgaccac cattgataag cactatgcca tgcttaacat gctgctttcg caatgtggcc
    54601 tcccgcagct gtcggacgat aaaagtgtgt ctctggccat gcggcgcatc cggcgtgaag
    54661 cggcaacgga aaaaggcgag cgaacaggcc aggctatacc gttgcggtgg gacgacctga
    54721 aactgctcga cgtcctgctg tccaggtcag aacggctggt ggaccagcgc aaccgggctt
    54781 ttctctttgt tgcatacaat acgctgatgc gtatgtcgga aatctcgcgc atccgcgtcg
    54841 gagatctgga ccaaacaggt gacactgtca cgctacatat ttcacacacg aagacaataa
    54901 cgaccgccgc cgggcttgat aaggtgcttt cccgtcgcac tactgctgtg ctgaatgact
    54961 ggctggatgt ttccgggctt cgtgaacatc ctgacgcggt gctgttcccg ccgatacacc
    55021 gtagcaataa ggccaggatt acgacaacgc cccttactgc acctgcaatg gagaaaatat
    55081 tcagcgacgc ctgggtgttg ctgaataaaa gggatgccgc gccaaacaaa gggagatacc
    55141 ggacgtggac cgggcatagt gctcgtgtcg gggccgctat cgatatggct gaaaagcagg
    55201 tgtctatggt ggagatcatg caggaaggaa cctggaagaa accggaaaca cttatgcggt
    55261 atctgcgccg tggcggtgtg tctgtggggg ctaatagccg cttgatggat tcgtaaatta
    55321 aatttctaac acatcttttt agattgatat ctttgctgta aagtaccctc gcctattttg
    55381 gagggtgctt tgcagagtca aatcacggaa tcaagacgct tcacggtgga tggttacacc
    55441 gtaaccttcg ccgctggtgt taagaacagt catgctgtcg ttgtattcgg catcatgacc
    55501 gggcttgagg ccgtccctgt gtttaccctc gaaaaaaact ggcgaaatct ggaggaagca
    55561 gaaagctacg tccggaaagt aaccatcatt gccgccgaaa aactcctggc ccactatcag
    55621 gaaaattatc gcactatggt cgagaagatt aatctcgctt tcactcgccc cactaccggc
    55681 tttattgcac cggatactaa tgcaggtcga tatccggcaa gggggcgtcg gtgaaaactt
    55741 attacccatc tctgaattgt tacccgtctt cctatccagg attgtccggg aagctgttag
    55801 ctctattagc taaagcacct acggaatggt ttaagccagt cgttatcaat ccacacttcc
    55861 tggattacgg atctgttcgc actcgtaacg aactcaaaaa cctactggcg catggattca
    55921 ttcgacaccg tgccggtaaa ggctatcagt tatcgattgc gccagaagag gccgtgcggc
    55981 tattcgcata tcgtgacagc cagacaaaag ctcgggtaat agctcaaata cttcataacg
    56041 gcagcaccta tgcccgccag tttggcggcg acacgtcgca gttcttgcgg gcggtgcgat
    56101 cgctggtgga gcaaggagtt attgaaagtt cctgtattcc tgttcctacc gttccacata
    56161 tcaaacgtcg ggtttacacc ttcacgcaga gagctaaaaa acaatgattt acgtaaaagt
    56221 gaaacgccta catccggcag caaaacttcc agcttatgcc acctccggat cggcggcgat
    56281 ggattttgag gctgttgaaa taaaaccatg tgtcgatagc aatggtgcaa tttcctcaag
    56341 ctggtgggtg tacaccggac tggctatgga gatcccgccc ggctggtgtc tgaaactcta
    56401 tccgcgttcc ggattgggct gcaaaaaaca tactcgcctg gctaactgcg taggaattat
    56461 cgactccgat tatcgcggtg aaatcatggc aaaactgatt acagatcccg gtggtgaagg
    56521 cgtttgcctc aagccaggaa tggcggtcat gcaaggcatt tttgagcgtg ttgaaccggt
    56581 atcgatggta gaagttgatg aactcgatga aacagagcga ggcgctggtg gctttggtag
    56641 cacatcggaa gaccgcgttg aaatcaagcg tacaccgctt cagtacgcaa agttttaagt
    56701 agaggaagga ttatggtcag cacttttcag gtgttcccca aatacaaatg ccacagcatc
    56761 attcgggcat cgaaaatcaa agatattgtt attgtcggca aagcttatgc gcccattttt
    56821 ggcagtatcg aagtcgttga gccaaaagga atgacgcttc gtgttgatgg tgtgttcttg
    56881 gaaaaattcc gaccgcaaat aggaggatat ctcgtcactg ctgaaaatgg ctatctggtc
    56941 tatgtgccag agaaagcatt tgaaaaatgc tatagccggg ttaacgacgc ctccgaaaat
    57001 ggggtatcgc tcagcattga aggtcacaat ggggtgacat tcattacagc cagggacgta
    57061 actatttctg ctggcggtat cgctactcta caagaagaaa tcgaccttga agcagccgac
    57121 ttttctgacg cgctgatgtg gctgaaggat ggcaagaaag ttgcccggcg cgggtggaac
    57181 ggcgaaaacc aattctgctg gctggttcct gaaggacagt acccggcacg aatggaagcc
    57241 attaagggat atttccccgg cgatctcgtt ccgtatggtg cttatttcgc cttaaaaaat
    57301 gcacaaggtg tagttgttcc gtggttgcct tctgtaggcg acttactggc atgtgactgg
    57361 tttgtagtgg agtgatttaa cgtggaaaat actaaagcaa ttcaataccg cttgcgtaat
    57421 ggcctgctgg tggctgttaa cgccgacatg tcactgccgt ttgacacgat tgaacgtact
    57481 atcatgacgt atctcggctt taatgaagag ctgaatgaag agcatggcgt agctatatgg
    57541 agtgatgcag aaagcggcgt tcatcgttac atcaccgcca ggggcaaaga ctactctctg
    57601 gaagaactgt ttacccttgc acagtctttc gaatgtgtag cattagacat gtttaatgat
    57661 cctgctatag cgcaacgact tatacgcgag cttgggctat ccgttacacc aattatcttt
    57721 aagaatggca gcctgactgg cacatggcgc gtagaacgca tctcaaacta ccttccatat
    57781 aaccgacagt taaatggagt aatctccggc gttaatcagc ccgtagcgtg tgaaaatgta
    57841 aacctggttg ccgctgtttt ggcaaccgca tgtcgtgtta tcggtttggc taaacaggct
    57901 tttattcatt tcccaaatgg tgcagaaggt agcgcagaga ttatcgcgtg tgatttcgaa
    57961 tttacctgga tgctacgcga atatctggac caaacagtgt tccgcgccga agaactggat
    58021 atgtatatca cgtcaatgat tcctgatgat gtgcgtgctg aagcaatcgc cacagcaagg
    58081 gccaaatgcc gtgcggcgat tgcagagcag gccaaagaag aaccgtccga tgaagccgtg
    58141 gctgatgttg aagcagaggt agcggaggat gctgacgcct aaaaacatca ccgaattagc
    58201 tggctgacag cagaaaaaat cattgagtga tagtaggaag cccgcctggt tgagcgggct
    58261 tcttttcaaa tattggaacc aaataattca cgtagttttt ccgctactga agatacgggg
    58321 atttcaccag ttgcggcccc caccgcaagt tccaccagca cgggagaatc atatacctgt
    58381 ataccgttac ggcgtagaaa tagcagcgca ctgtttagcg cggtacgctt attggcatca
    58441 ttgaatatat gccctctcgc cgtagccacc aggtaggtgg cggagacttc gaaaaggtcg
    58501 gtgatctctt cgtaggcaac tctggcctga actctcccga taatggcctc tgccctaccc
    58561 ggatctgaca ttcccggcag gccgccgtag cggcttatat tcgcatcatg aagcgcgata
    58621 agttcttccg gtgatatatg cctcattatc ggttaaccag ttccttgttg gtggagtcca
    58681 gggtgtcaaa cagggatgca aattcagcat ccagcgccgc ttttttgtag gcttcaaaag
    58741 tagccttgct gacaattact gctggctctc ggcctctgcg ggtgatttca acctcttccc
    58801 cggcttcaac attgttgagc acttcagaaa ggttgccgcg cgcggtacgg aagttaatgg
    58861 attgcataaa cacctcatgt actcgttatg tgtacacaac tataaacttc acaggtataa
    58921 agcaccagca ctttgcagct taaatcaccg gacaatcatc aaattcccca cttcggacat
    58981 cattgatgac atgagtgatc acaccaaaaa cagcattact ccccgtgcat ccatcgtcat
    59041 ccactggtaa cgcctctttc ctcccggtgc ttaaatcctc caggtgctgg cgcggatact
    59101 tcctgtatct ctttatgcga tattcaccct ccatagcgca cacaagcaga gaaccatcaa
    59161 ccggagtaag cgaggaatca accaccagca aagcaccctg caatattccc tcacggtgat
    59221 ggctatcagc tgcccgcatg aagtaggttg ctgatggatg cctgattagt tgctgatcaa
    59281 gagaaatacg gctctcagca taatccgccg caggagaagg gaagcccata gcgttttcac
    59341 ctcagaatac tgtttattca tacagtatac attaaagatg cttgaagtgt gcaatagcgc
    59401 gatgctttgc gctcgcctgg tggtgcgtta ttttttggct atatcttctt tctgatacac
    59461 cggatcgctc ccttttggca actggaggct taactgccgg tagtgccgta gccgttccat
    59521 gaaataggcg cgcaggtttt ccggttgctc acgggccacc tgctctgcaa tcacaggtat
    59581 attcagccgt tctttgtaag caacgccgct ggcggcaagg tctacgttca ccttgtctcg
    59641 ctcttcctgg cttttagctg ctatatttcg atctgacaca agaaacctcc aggagttagt
    59701 ggatcaggca catgcacaat aacgttctca atgttagccg ttcaattcag acaatcagag
    59761 actgcaccag tgtggtggca tcaatcccat tgcgaaacag catagacgaa ctgcaaattc
    59821 gtgtattgaa tccgaatcag gctaataagc aattgcgctt tattttgacg ctgaaaagtg
    59881 aaacagaggg gataaagcac agcgtaaaag tgttttctga ggccattctg cttaatggga
    59941 agctccggca tctggtaagg ccagaacgtc aatatcctga cgtcctggcg cgtgaaaaag
    60001 accttctttc tgaagttcag gatagggtga tcgatttcgt caaatgctat cccctgcatt
    60061 gagggcaggt gttcccttcc gcaaagtagg gaaaactgct atcaagttca tcacaccatc
    60121 tgcgatggtc gtagcaccaa aacgcctccc acggtgcacg gaaatacttc atccaccagg
    60181 acactcgatc aggtatatct gctggtggca gttcttctgg caataatttg cctgataatt
    60241 ccctttccgc ccgcgacagc atttttttga ggctcgcgtt ctctttttca agctcatcta
    60301 cgcgcacctg taattcagct ttcgttggca tggtccgcct catgcttttc agccaccagc
    60361 ggcaataaag ccctggccat cttatgaacc aatagtgcat caataatgcc aagcgtatgc
    60421 cccggcttaa tgtttaatgc cgtctcaagg tgacaccttt ccaggccact tttctcggct
    60481 tgtttatgat gatctggtgt aataacgtcg ctttcccgaa agtttccgga ctgaagcatg
    60541 actgcgcggc aggcatcctc gacgccctta actgcatctg cgcagtagtt atagcgattg
    60601 cattccacta atttctgctt gagattttca attgattgcg cgacatcagc ctgtattacc
    60661 ggcgctggcg gtgcgatata aaacttcgtc cccaacggca acaacttcat cgctttttct
    60721 cccttaatga tgcgataagt tgatttcccg ccaaggtcta ccgttccatc cataacaagg
    60781 ccgtgtcgct tctctgaaac ttcaccaata ggctctgctt ccagcgatgc cagtgcaatc
    60841 cgtgccagct cacgcacaac ttccggcggc gcgtaacggt cattcaggtc atcccacagg
    60901 cgtagcatgt tatcgctacc agggtgaaca tcctcgttag ttccggcaag cgcactaata
    60961 acctcatcgg ctgcctcaat aattttcaga gcttgttctc tggtaatagt ggtcatttgt
    61021 taatcctcaa aactttatgc ccaggcgcaa aagcacgtgt tttgtctttg cttattcgcc
    61081 agccatcctt acgcgcctct tttgcacaac cagcccatga cgtaccgata tactctccga
    61141 agtctggcac tggatataca ccttccgtac actggcggca gtcacaatag agatgcatgg
    61201 tgtaacttgc ggcaatagcc atatcactct cctttagtac gcaagtggtt tttccagcgg
    61261 ttttgcgccg cgctgggctt tttgcaaaaa ccacaatcca tcatcccgta atgtttcatt
    61321 aaccccaccc gtcggttgct gagtctcacc cactgccaga cgccaggagc gtttctacga
    61381 actaacagaa tctttgcttt acggtttttc atcgttttgc tctcctgcgt ttctttgctg
    61441 ctcgtcgtgc cgatgcaata ccggtatggc ggcgctttgg tgccgggatg atgttgtcag
    61501 ccatcaggac atgcggcttt gcaattagcg cagaagccca aaaacgagtc gggtacggta
    61561 acaagccgat acatgccaca cgcattactc acctcctttg atgcgaatgc ctgttgcaat
    61621 gctgtttatg atgctgtcag tgcatggggt agaaagctgg gcatctccag caattctcat
    61681 aacctcaaca tctgcatatc gaataccgag gtgtatcaga ccggctatac ctgacttaag
    61741 ccgggcattt tccataaata gatcctttgc ccgctgtttt tctgcctcaa gctcaacgcg
    61801 cagcttccca accgttagcg caatatcctc gttctcctga tcgcggcgtt ttatgtattg
    61861 ctggtttctt tcccattcat ccaacaatgc cagcgcgata tctggcgaaa agtgcttcat
    61921 aaaatcgtta agcgcattaa ttcgctgatc gaaaggcatt acaggtgctt caccagcaat
    61981 ttttgttttt tcagcgattt cacgaagctt ttgataatca atcttgctca ttggatgact
    62041 cctttacgaa gctgttcggc gatatcttcg agaacgccat cagagaatga gcgatcaaaa
    62101 tcgccttccg gcgcattagc cataaactca gtagaggtaa ggatcatccg ggcaatatcc
    62161 gcggcgttct tcgcagtatc atcaataaaa ccagctttcc aggctgccaa cattctgttc
    62221 gccacaaaat aagcgccttc cttgcgtgct tcagtcttcc cttcagccag aaaagcatcg
    62281 gtggctgggg tttcgctgtg gtgcagagca tcgttgatta tcattgcagc aactccggcc
    62341 tgccctgcat ccgtgaccga cacatgatca agagttacag ccattgcgag tttcagcccg
    62401 gcgttctctg ccaccagagc cgcgagctta gtctcaagcg gtgctattcg gcacatagca
    62461 tcaatatttg tgtcctccag gcgcttaatt tcgcccagga gtgccagcgc aacttttggt
    62521 gggatagccg cgatataacg ggcattagca ccagcattcc tttgtccatc aatgccaggc
    62581 cagtcaataa agtatccgca atgcctaccc tcagatgtgc gcgcaggata aatgccgtta
    62641 tgacccggca aaatatatgc tacccattcc tcttgtgttg cctgttccgc cgcctcgcgc
    62701 agtacctgat agtcaattgt cattctcgcc atccttcaca gttgtaatca ctacagcctt
    62761 caaaatcata tgggctgtac tgccaggtga tttttccgca atgcggacaa ttccagcgca
    62821 ccttcccgct tcgtgacttc tttcttctgt tttgcttttt caaccagtca ggcatgatca
    62881 aacctgcgcc ctgaaccatt gttctgcggt taaaattatt gatattgaac gtccgccgct
    62941 ttgctgcatc ggcaatggaa aatggcaacc aaactattcc tggttcgttt ttgttggcga
    63001 cgctaaagat ggttgcttta ctgaagtcat cggttggcaa tccaccgtgt tgaagccagt
    63061 aaacatcgtt gccattccag caaccttttt tgtaggccac atacgcagtg caatctgact
    63121 caatcaggct ttctgtaggg atgtactggc aatcaacgtg ccacactgcc attgcatcca
    63181 cgctatcagc gcaaacaggc tgatcgatat ctcgaccaca attccaggct ttttgggctt
    63241 cttccagcgt gtaaacatga gcgcgatcga tatcagagct gtaaccattg ccgttatggc
    63301 gatggaatga ggcgttatta cccacagttt cacgcaagca catcatgtaa aagcggttat
    63361 tcactggttg cctccgcttc ccacgttttc agactttcac cacagaacgg gcaaaatgaa
    63421 actcgaatcg gcgatttaga aagctcgcct gaccgcagca tgatcaggtc ttgtgaatga
    63481 attaattcat ggttatagat tttgtatttc agcagacctt tccgcgtcgt gtattcagca
    63541 tcctgctcca gggattgtgc caacgccgcg cacggttcta tttttttgtc attaatcaaa
    63601 caagtggaga ttctgcactt tgcagctccg tcaccattac cttgactcat tgcattgttc
    63661 ccatcagtta ttgaacgtga tcactccgcg ctcgatggcg aagtcaaaaa gctggttagc
    63721 ggctacgtaa aggcgtatgc catgtgcttt ttcccatgcc cggacatcgt tttctgcgct
    63781 tctggcgcag tcatcgcaaa gaggaacagc ccagcggtcg tgttcgttta acgagcgggc
    63841 gcggtacatg aacgggtggt taactttgcc accgcatccg atgcacggac gagaaaccac
    63901 aaaccggaga taagccgggc ttttaccgag gaccgctttt ggtcggcgca tataaagcag
    63961 gccggaatcc tcatctacag acaggttgac gatctgctct gcggttatgt ccaccagctc
    64021 acgggtgctg tgctcccagg tgatatccga ttctttcagt gtgccggtag ggatttcctg
    64081 ttttggctga caaaatgcaa tgcgaccggc ttcatctggc agctcgtctt tcagattccg
    64141 gcgaatggcc caaaaagtga gttcaaccat gctcagatcg cgttctggcg gtagttttaa
    64201 ctcgctcgca gcccagttca taacccagtt ggcacgattc agggataact ggtcatccag
    64261 cttgccgtac cccttcatca tgtattccgc atcatgcttc cagcacaggc gaacggcaga
    64321 gccgttatag aaatgagtgg ttagctggtg gctgcaatcg cgcttatcgt gcgcctggca
    64381 atcgtggata ttggaactta cccaatgaac aagcgaatct tcaccgccca acgcgttaaa
    64441 tacgcgctcg ctttgaaaaa acggtttcag agactggttg gcaaccagcg aataattcag
    64501 atccactacg ccatctggcg tgttttcagc ctgttcacgc ggaagtggag agataatgaa
    64561 acggcgacct gcgccaatgt agttgctggt gggcttgtct accggaaaga cagccacacc
    64621 agctccgttt acgaaatgag gtgtgattat tgcactcata atgtataccg actctgtttt
    64681 gttccgagcg gtaaaataat atgttagaaa actaaaatca atgttctaac acattttgag
    64741 tgcgtaaatg atttgatcag actttaagct gccctccctt cacctgcatt agcgtcagat
    64801 ttccgcaaaa aaccgcgccc gtgtctatgt agtgctgatt ccagtatgct tttggtcttc
    64861 gtaccggtgt gtgcccaaag ataaagcgat ctgcgcctgt gatttctcca ccaatgccat
    64921 ctatcgaatc accgacgcga ctgcgcgacc agacaacatc aaaaagcgac acatccttac
    64981 cgaactggta ctctccacct ggatagtcgg catgggctat aacgatagtt tcatgcccgg
    65041 tgttcagctc aatgatatag ggcagacgct ttaccagctc caccagcgcc ctggctaata
    65101 tttcctgatc agtgtccagc atgaagaacc attgaccgcc attcattagc cagttattca
    65161 cattgcctgc gggacttaac gcatcgatca ttaatcgctc gtggtttccc ataaccgacc
    65221 gaaaccaggg catctgcaat agctccaggc attcaacatt ttcggtgccg cgatcgataa
    65281 ggtcgccaac cgatatcagt aaatcctgtg tcgggtcaaa atccacacga tggagttcat
    65341 tcataagtag ggtgcagcaa ccgtgcaaat caccaacaac ccatatgttt ctgtagcctg
    65401 aaccatcaat acggctatat aaattcactt catgcagcgc ctgattcatg cggcaacctt
    65461 ctcccgcagc cagatacaaa ccgggccatc ttcagtgtca tgaatagagc caacaaacca
    65521 tccttcgccc tctggtcgct ctggttccca ggcggcaata tcgggaccat ctgcgtccag
    65581 attaaaatga tcttcatcca tactgcgaat agtccactga agattatttt ccttcatcca
    65641 ggcgtcaaat tcctcagtgg atatatattc acgacctgcg caaaactttt catactccgg
    65701 atgtgtccag cagccatatt catcacgttc taccggcatt tctttaatga tgctcactct
    65761 tcatcctcca agtcggcaac ggcatccatc acatcagaac cgcgaataac ctcaaaagca
    65821 cggcaggcca tttcaaacac ctgttgttct tgcggatgcg gtgactccca atacttaaaa
    65881 ccaggtcgat gctcgtaccc catcatggaa taaaaatcgc cagcaagttc aatcgcggca
    65941 tcaacaagtt cgcgatttgt catcgtctgt tctgtcattt ggttttctcc tgtctgaaca
    66001 tcactatcat caggtcgcct tttgtcgcta tcctcgctgt tgtgcctggt tcaatgctgc
    66061 caagttcaaa tgcgtcatag aacgcttcta atgccttctg gcgtagttcc tgtttgcgcc
    66121 gttttttcca ctgtttcagg aaaatggaac ccagccatcg ccatgtacgg gacatgatgt
    66181 aaagccaacc gagaagtgcc agaccggtat ttagggccat atcgatcgtt attgtcgtgt
    66241 cgatattcac ttgctgcttc ctcttcgaag ctcatcggca aagtcagttg catgttcacc
    66301 gagtagtttc cagttatcgc gtatatcaga tgcaagcgac tgttcggatt ttgagttaca
    66361 tttctgtgca aacatctcca atccctgcgc ccggacttca gccaggaaag catcagtggt
    66421 tggcgtttca ggtatctgtc tcctcatccg ttctattgca tgattgaacc cgaagtcttc
    66481 cgcgagagat acgtcatcca tattgtcatt gtcatcctca atatcccgtg attctggaat
    66541 tgcagacttt attcccgcat tctccgccgc cagcgccgcg caattaccct ccagctctgc
    66601 aatgcgctgt tttgcggcat caagttcaat cgataatttt tccaactgct ctttatgctt
    66661 cttgtattcc tgatatgcgt gccaggactg acctttgcgc acactatcag taatatcagt
    66721 aatctgttct ggtgttagcg tggtcagtgg ctgtgctggg aaaatcagca cttgcccgga
    66781 atcccaatca aaaccagcgt gaattgactg aacctcaact gaaggtgttg aaccgatgcg
    66841 accaggcgaa tgaacaacga tcgttacatc catatcgcga cgatggctgt ggttgttgga
    66901 caaaatacga ttcaccaact cagaaaattt ggaaaatttc atgctgattc cctttgctct
    66961 tcctggataa tgttgttgca atctttcacg cactcgttgc agatgaaaac gttgtccccg
    67021 gcaattaact ttttaacggt gtgctgggat ttgttgcaga agctgcaata aagcgttgga
    67081 ctggctgata cggatggtgc gccagatgtc agccgcgcga tgtcgttctt gcgacgcaat
    67141 atcacacggc tgcactcgac cagcatctcc ggggatatct tctcctccgt agcgagcgtt
    67201 tctaatcgtt cgagtatgtg gaaggctttt tcctgggtaa tcctgggtaa ttcagcgtta
    67261 cgctctgcca gttgtgcggg cgttaaacct tcagacttca tacactctcc tttcgaaata
    67321 aacgtactga ttaatcatgc ccaggggcat ttcgagtttt tccgcgatct cacggcgggg
    67381 aacaccacac tgatgaagct gccgtgccag ttctatatcg ctctgccggt atttggctga
    67441 cggatgaaag tctcctttca gaatcatgct gatccccaac tcccgcgctt tagtcctgac
    67501 ggcatcaccg gtacgaccga tcagcttccc aatactctcg accgtcatag ttccggcgca
    67561 ctggcggagt atcatgattt ctgcccttcc ccatccccgc cagctcacgc agaactcctt
    67621 ctaaccaaaa gaacgccatc ttcagaaaca acgttgcagg acttcaggta attcattgcc
    67681 tctttcggta atggattctt tggatcggcg tttgccaggg atttcgataa cctcatgata
    67741 aatttgatca ttaccttctg gcggagcttg tgctcatgag ataaagaaag gtaataggaa
    67801 atggtatggg ctaaacgctc acgaagctgt tctgtgccgt gatatacagc agcgatatca
    67861 cgcagtgcat tgaccagttc ccggtaaata tgcggagcaa cctggcattc aatgttggtt
    67921 ggtgactcat aaattacatt cagccccagc ttttgagcca gctcgtgctc tgcacgagcg
    67981 ccaactgatt cctcccaccc cttgagcaaa tagaccgcat tagccgaacg caccattgca
    68041 aggcaaatat ccatgtattc gctctggcag aggccagcag gtaacagcgc cggattcaga
    68101 acaatatgcc ctacctccat cagctctttt gctttcgaaa aaaacgctgt gcggttgtag
    68161 tcgggataac cagtcatcgg ccccgcgatg taaattttca taatgcgttt tgacatcaaa
    68221 gtttccccag gaacgttacg caaaagttga taagagcaaa gagttcaatg cccagctcaa
    68281 acaacgccag gacagtgaaa aacagggcat atagcaaccc aatttctgta ccggattgct
    68341 ggtggattgc acttattgcg acaagcatca tgacctcctg atatagcgtc tgaaaaaagt
    68401 atcttcattt tgtgttagaa aatcaatttt gattttctaa cgagtttgat caaccatagc
    68461 ggcgatgtag acaaaccggg tatttctatg aagcaaagct attgggagaa acagagacaa
    68521 aaagccatgc aaaaattggc tgacccagcc tggcgagagg aacaaagggc aaagcgcctt
    68581 caacaagctc aacgccagca gcagcgagcg agagaaaaag ccgcatcgcc tgaatatcgg
    68641 caaaagaaaa ttgaaaaagc aaagcaatat gaacagcgga gaaaagataa agcggtatcc
    68701 gctccgccca aaaaaacacg cacgtcacgc ggcctgaagg gcagatcact cacagccgat
    68761 gaacgccgga tacagaccgc tatcggtact ctcccctgca ttgcctgcca tattcacggg
    68821 caacatagcc cagtggtatc cctgcaccat atcttcggga gaacggcaga gaacgcgcat
    68881 aaatatgtcc tccctttgtg taaatggcac caccagtacg cagcgccagc cgaggtccga
    68941 gaacaatatc cctggctggt ccctgttcat gctgacggga aaataggcgg aaaagcagat
    69001 ttcatgcggc gcaatgccga tgaaatgacg ttgtatcaga tggcgattga attgatgaat
    69061 tagttttcta acattttaag ttgaattata aatttctccg atgtacattc actaccgatt
    69121 ggcacaccgg tcaacttttt gagacaaact gtatagtttt tcgtattatt gccgccgcca
    69181 tacctatggc ggtgcaatat aggtggctga aaagcccccg ttgactcacg gtgttccagc
    69241 ctttattgcg ccgccgccag accgtggaac agtcgatggc ggctccgaaa gcaaggagtc
    69301 actacactat gaacagctac tgtcttttcc catcacgcgt tgtccgccac tcacgcgata
    69361 atctgcattc tttactcgcg ctgggggtgt caaaatgacc gttcgctacc tcaactttca
    69421 aatccagaac atcactggcg gttgctatga ctggtttgtc actctcggaa aagaagtgat
    69481 cactgggaag ctggatgaag tgaaagctaa agcaatggcc tacgcctgca agcaagcccg
    69541 gaagaaatcc gccaaagcat aaaatactga cttttgcgcc ctggcattat cgtggggtat
    69601 atttctacgg caccttagaa aaacgggtgc cgggattgga acctcacgcg gtagctcctt
    69661 aacttagtca atgacctgat ggagaattcc gttccccgcc gctatcgtgc agggaacggc
    69721 atctccgtgg ttaaaggtgt ttaaagctca cctgcgcgct gtttttcaag cacagattta
    69781 acatttggcg ctttcccttt aaaagaatgg aaagtgccac atttttctgt tttaacctcg
    69841 cgcagagctt cgccatcggc gttctgccat tgatgggata atgtcatatc accgcgagaa
    69901 ggaacatcca gcgagtacag cgtgtaagtt ccccccatct ccgcatactc ctggaacaca
    69961 tagctcatta cgtcagattc agtttttcgg tgcgcgttat caaccttatt cccattcaga
    70021 aatatggcat ctggatagat ttttatatca aaccgaccgc acttaacttg taaatttccg
    70081 gcgctcgcga tcaaagggaa agacgccagt aaagcaatag ccaatctttt caattctgcc
    70141 tccgctgcgt aacttattgc ccgtattttt tacaccattg ctctgccatt tgtttggcta
    70201 aaggcccggc tactgcactg tattctgctg ttttactttg cacacatgaa gcagatggtt
    70261 ttttatttcg ctgctcggtt agtttgcgct cataagccat catgctatcg aacccggcaa
    70321 tatcactttg gcgaagcatt ccctttttaa ccaaaaattg ctgcccctct ggcaccaacg
    70381 caagcataaa aagaggttgc aataactcac ctaatccttg ctggcgatac acttcgaatt
    70441 gctgccatcc ctgacttaat ctggaaagag tatctttggt tgaataacct gtttttgtta
    70501 tagctttgtc cgtcagatat gctgtatatg caaaaacgca aaagtcagtt ttaccaataa
    70561 actgagttcc aacaggccgt aatggaatgc cctccctctt gcaaaagtcc ataatggccg
    70621 cttgtgaatg atctccacca gcgttattca taacctgctg ccctgccctg aattgtgcag
    70681 gtaacgcagt tgcattggca gtattagcag atacgcatcc caacatagcc gcgagcgcgg
    70741 cccctaaagc ccttaacttc actacaccat ccttcatgca aacaaaatga agttttatgt
    70801 tataaaaaca attaactaca taaacatgat ttaggccaaa tttcggttaa aaaataaaat
    70861 ccaccaaaag tggttgacac tattttggaa atcacaaact gcacataatc catcgcgcta
    70921 acggctcccg ttgaaggttc ttttgacgat taactttcag ccgaagcgcg gtagggagtc
    70981 ataacgccaa agcaggccgc catgtgcggc ctttttttgt atccgtcatc cgtggaggaa
    71041 ggacaatgga aaagatcgca atattcagcc tgaccaccag caagcctcaa atgctcactg
    71101 caatactgaa agacggtgct ctcattatta acgaagtaaa accccttccc gcgtcagcat
    71161 tggagcaaaa gcaaaaaatt cctccagcta tagcagccct gcggaaaagc aaatttaagg
    71221 tactggtaga cgaaattacg ccaacgatct ccgctggcac cggagcaagc caggtgactc
    71281 tcaagacccg tcatgccgat ggcagagcag caatcatcgt cgggatggaa agatacagag
    71341 agttaaaact ccagaagcta ttatccctgc cgcaaaataa caaaggtgct ttcgaaatcc
    71401 ctgactccat cgttgacacc gaatacaacg gtaacggaga agaagtctac cgggtgaact
    71461 ggcaggatat caggccggag catattttga tgatcctgtg ttgctacgcg accgtatacc
    71521 acaatgtagc cagtgcggat tacgtagagc agatgaccgg tacagtcgag aaagagcaaa
    71581 aaacaggcat actcgcttcg ttcctgtcca ttattgggca tgaaaaagtt aaagcaggca
    71641 cctcccagcc aaagacactg actgggaaag aagttgatga agataccgtg atactttgat
    71701 cacattagta gctttgttaa ctccctcaat accaggtaga agagtaacaa aaatattgac
    71761 gccagtattt gcgtggtcaa tgaggcgttc ataaacagat caataagctt taacaattct
    71821 agaataacat ccatgtcatt cactccgttt aatttttaat ctaatgccag caaatgaagc
    71881 tggcccccgc ataaagatta atgaaagtca cttgtcacca gtgaggggat ttatgaacca
    71941 catccccctg aactggtggc ctgtctgttt ctcgcatttc acaccctgca tacagtttcc
    72001 cccaggttat gattgagagg ctttgttatg ggctatagca gactcgacga taggtacatt
    72061 gaagacgata tttttcgtgc gctgtttcac caggaaatga ttaagcgggt atcggagtat
    72121 cactctgata atttccagta cacgataaag attgatgaag tatatcgttc agaccttgca
    72181 gcctacaggg cgtatggcaa tgcagatttg cgctgggtat tccgggtgct ggtgggccat
    72241 gagtcagaaa tggaagaaat gcccgccggg accacgttaa ctcttcctga tgtggcatgg
    72301 ctgaggaaca agatccgtga ttacgcgagc gcggaaccgg agatagaaaa tgcctgattt
    72361 cctgaaaaaa caggacgggc gctatatcac tgacggcctg tcctctaagg acttcacgcg
    72421 tttattcgag attatcagga aagaacaaac ccgtaagcgc cgacaagctc accggacgct
    72481 gacgccaggt agactgagga acaaatccgc cgaagatatt ctcaagttag ggaagaaaaa
    72541 aggcggcacg ttcttcacgc gagacgacct gaaaggtttc gaaaagctac ggagtaaaac
    72601 gcgcgaaaaa tatgacagca agacggctgg catcacatac gcccagctgg tggcatccag
    72661 ccaggcaatc gatattaagc gtgcaaataa cgccgtggat gacggttctg gtatcaaaag
    72721 agctaccccc gtatctcttc gccacaatgt gattaatatc cgcgtagaag catcggatat
    72781 atccgtccac cagcaccata tcgtccggat acgctttgaa gaatgggatc agatggttga
    72841 tgacatcgca gaagacgata aatcagctct caaaatcact aaatcactgt gcgccgggcg
    72901 agtgtctttc gattgtgact gtggtcgtca tcaatactgg tatcgttaca tcgccactgc
    72961 gggtaacttt gccctggcac cgccaaaaga atacgcctat ccaaaagttc gcaacccgaa
    73021 gctgcaaggc gtcgcctgta aacacgtgat ccactcaatg acgcggttac agtccgccag
    73081 ttggcaaatg agtattgctc gtgcgctaca aaaggctgca acgcaaattg catttggtga
    73141 cgatcgccgc cgtacaacta aacacttctc aaaagaagac gagaaggagt ttaatcgcaa
    73201 tcgtagcagt aaaacgaacg ttgaagccgc caaacgcgaa tggaggctct atcagaagcg
    73261 ccaggccgct ttaagtacaa aactggcaaa ggacaacggc aagatcgaca agctacgtga
    73321 ccaattgacc agggccagaa agttgtcaga cgcacagaaa aaacgggcgg ctgcaaaaga
    73381 agcggccttg caacgtgaga aacagaaaaa taaggaactt cagcaacgcc ttgccgatca
    73441 gttcgcactg aagaagcagg cgttcattga tgcactggtc atggcaggaa cgtcacctga
    73501 gcaagctgaa aaaatgttta tggagtacgt gaagaaaggt tcttgattga caacaaaggc
    73561 ggtcatacag accgccaagc tcatacacca accaggcttt caagaggaat gccaaactgg
    73621 gaatgtaaac gacgaatcat aggtaacgtt aaatttcgtg tcccatttag cacttcgtaa
    73681 acacgatttg acttaccaat cgccggttcc agatccttca cggtcagccc ttgctgttcc
    73741 atacggaatt taatggcttc aataggtgat ggtggctcaa ttgggtaatg ctttttctcg
    73801 tactcttcaa tgagcaggca cattacttca aagaaatcgc cttccggtgt gttcatttcc
    73861 ggttcgttat cgaacatcgg ttcgaccgca cgcagtgcgg cctcataatc ttgttctgta
    73921 cggataggtt taatgttcat gatttactcc agttctattg tatccgcttc aatggcatcg
    73981 tattccttat gtgttccaat aaacttaacg aacatccatc ctcgctgata agcaattgcg
    74041 acaattaacc tgtaatcatt tcccttaata ttgaacacca cgcgcctgtt tttaaggatg
    74101 ctggctgtcc ggtactgttc tttgatttca gccggatttt tccagtcagc ctttgttgct
    74161 tcatcaaccc atgcctttaa tggctgttct gcatcgggat tcttcgccca gaaatccctt
    74221 agtgttttta gcgaaattat tttcatcaca gattccttct ctctgaaagt atgctagtcc
    74281 caatatggga caatgtaaag cactttagtc ccatgctggg atatgaattg aaatcacaat
    74341 ctccagataa tgcaccctcg atacctgata aatcgacctt tgaggatgct tatgggccgt
    74401 tttgacgaat ggtttgctga cgatgcaaac ctggcaagta aggagtcaga acatgacagc
    74461 acgcagagag aaacgccagc gacggttgaa gcggatgcag gaagcgcgcc ggaacatggc
    74521 aatgccggac cggattcatt cagcattctg gaagagcaat ccaccgccga agctgatagc
    74581 catgataatt ttgctgatag caacggtggc cttactccgg acgctggcga accagatata
    74641 gccatacttc caccttccct ggctggcaga gaaccgactc cacagttaaa agcacgctat
    74701 aacgggcata aagcctttaa tgaccaaatc cgcgcagact ggatgctgat tattgaatcc
    74761 agcccagacg cgtttcaggc tctcttatat cgaccagatg ttggcacata tggggtagtc
    74821 agcgacgaaa caggagaaga gtcattcact gaactggata acaaccaacg cgaactgact
    74881 taccaggaac ctgaaatcgt ttatgtgctg gataaccctg acgggcgtga ctctttccat
    74941 gcaattgacg cagacggtga gcaggatggc ttaaccgatg atgttctgat tctgcgtatt
    75001 gcagcaaata acgtccccgt cggctcaatt cttgaatgga atgaagagat ggtaaacggc
    75061 gtagcccgcc gctggtggta cgtgcaccgt atttttagct acggcacaca gcatgttggt
    75121 tcgctttact actgcatacc tgccaggaat tttgatacga ctcaaaacgg ggtgatcgaa
    75181 tgacttcaaa taaaaccctc ctggcgcgaa ccggtgaatg gcaaacctta cgcacaggaa
    75241 aattccagac cacgggcttt gaaaacgtgg ataacgcgtt tgcgacgcta atcagcaaca
    75301 ttttttctga tatcttactg gtggcccccg cgccggaaga aaaacgcttt gcgtcattcc
    75361 tgaatcgtcc accagcagag cgtgtctata tggcccgttt cgacaatgcg atcgagtttc
    75421 ttaaagcagt tcgtcgcgca aatgccgggc aagggagaaa acctgaaaac cagaacatta
    75481 accgggatgc tctccccctg gtcaatatct cacgcactat ggatatcaat tatatcaacg
    75541 atgatcagca gattgaccgc aaaaaagtag ccagtttttg cgaaccagat agcggaacgc
    75601 ctttagcaga actggaatac acccaggcca ttctgacgta tgacgttacg ttaatggcaa
    75661 ctgataaagc gaccatgagt ctgatgtgta attcgctggg cgcacggctt cgcctgatga
    75721 caggtacaca atttgaagca accactcacc ttgttcgtgt cccggtcccg ctgatttgct
    75781 cgatacagga tgccaaagaa gtcggcttta cggatgtttc agcaccaatt ggagaagagc
    75841 gtatttatgc cacacaagcg ccgataagtg ttattgcaga cgtgatcaca gcatgggagt
    75901 tggacgcaaa acgtattatt accgaaacct cgatatctat ggggtgataa gtggcccagg
    75961 agttacaaca atattttcta cagtcagtgc tcattaacga taacaaagtg ccacgagact
    76021 ggatttttac cgcagtatat gtagaaaaaa ccagcctcaa agcccctttg ctaaaactgg
    76081 aaattcatga cgctaccggc accgtaattg atgactggaa agccaaatac ggtgcatcgc
    76141 tggtggctga aatgggcgat ccaaacggta atgctggcac ttttaaaaca gatttctttg
    76201 ttacgtctgc aatgctggct ggtgatgttg ttaccgttat tgctgtcagt gaagacgtgc
    76261 gcaggtttaa gatcccctcc ccgcgcacaa atttacatac caacaaaaca ccagacgcta
    76321 tattcaaggc atattccggc aagcttaaaa ttaccagcag cgtgctaaaa cgcgcagtta
    76381 catatcatct gaatgccggt gacaaaccgt caaaaatgct ttcggagata gcgcgagaca
    76441 aaggtgcatt gtgttgggta tgtcgggggg aatttaactt ttacaccctg gctgatctga
    76501 tgaagcaaac gccatcattt acctacgagg ggaataaccc taaagcagaa tacactttgt
    76561 caaaaatgcg cctgctccaa caggaacatg cgacaacagc aaagaatcaa tatcgttttg
    76621 ttgggtattc catgaccgat ggctacgtcg aatatggcga tagctcactc ccagtgcgtt
    76681 atatatccga ctctgatatg gaaactcttc gcaatatgca gctgtctctc gtccccaaaa
    76741 tggatataga agtcgcaggc aatcctgata taaaaccggg gatggtaata gagattatcg
    76801 tataccgcta tgaccaggaa aaccgcattg atgaatcaat gccccgtaag ctgatagtaa
    76861 aaaatgttgc gcactttgag gaccgcgtag gctacacaac acgaatgata ttgggagtgc
    76921 cgaacaaatg aagcgtagag cgcaaattgt tggaactgtg cacccggcag ggcttatgcg
    76981 tgctcaagtc cgtgttttac ctgactggaa tggcgttcct gatgacgatc taccctgggc
    77041 ggaatacctg ttacccatcg ggaacgcttt tgtacctaca gtcaaaggtg acctggtctg
    77101 ggtagagttt ccttatttag atgttaacgg tcgaatagac accagacgcc caatgatagt
    77161 tggcgcggct caggatgcgc ctggcggagt tccaaacgtc gcgccggagg catcaggcaa
    77221 tggtagcggc tggacgccgc cggaagtaga tggagcacct ccccgccccc aaatctcagc
    77281 aacgaaagac ttcgttattc accgcaacaa tattcttgaa gtacgaactg ctggtggcgg
    77341 ctatgaaatt gccaatacgg cagcaggctc aaggattggc atgaatgagt ccgggcagat
    77401 atatatcatt ggtccggctg atgtaatcgt gaatgcagga gggagtgtta acgtcaaatc
    77461 agccaacaac atcaatgtta atggggaaaa tattgctgtc accgctaacg gggacatagc
    77521 tttcaaggca gggggaacct ttcaggccac tgctggcaac ttcgatttca agaaaggata
    77581 gaaaatgcac ccatttgtgt tagataatta acgtgtgttt tctaacatat atggtgagaa
    77641 atgagatcag tcgctttcaa aaatatcttc atctatcgtc tttcacgcga agttaactgg
    77701 gataccgcag aagtaaatgc agcccttagc aagtttgtgt ttaccccatg cggttctcag
    77761 gatatggcta aagctggttg gaccccaatt cttggcgaca acctcaccca tgaaaaccag
    77821 ggttttcttc tgatgcagca taaacgagag gaaaaaatcc tgccttctca agtactcaaa
    77881 gaagagttac agaaaaaaat cctgaaactt gaagaagagc aagacagaaa gctgaagaag
    77941 accgaaaaag attcgctgaa ggatgaagtg cttcactctc ttcttcctcg tgctttcacg
    78001 agaaaatcac tcgcaaaaat cctgatcgac cgcagcaacc atctggtatt cgttgaggca
    78061 agcagcgcca aaaaggcaga ggaccagctg gctttattgc gaaaatcgct cggcagcctg
    78121 cctgtcattc cattcacacc acgcgaaccg ctggaaatta caatgaccga gtggtttaaa
    78181 aacggcttcc ctgccggatt tacagcaggt gaagacgcca cattaaaggg tctgctcgat
    78241 aatggtggtg ccgttcgctg taacaaagtt gatctacagt ccgacgagat tatgtctcac
    78301 attgaggcgg ggaaagtagc tacgaccgtt gcaattaact ggatggaccg cgcgtcgttc
    78361 agagtcaacg atgatatgag tatcaaagcc ctgacattct gtgatgatct ctatgaccag
    78421 aacgacgata tcgaccggga ggatgtagca caacgatttg atgctgattt cgtgctcttt
    78481 acgggcgaat tatctgcact gtttaacgcg ctggtggagg ccattggcgg tgaagcagaa
    78541 cgataataac cgaccgcttg ttgtgagtct ttgtgatttt acgggggcaa tggttgcccc
    78601 ctggctggaa tacggtgtcg atgccgctat cgtcgatcca cagcacttat cgaccagtga
    78661 cgagcggatg caatcaggtg ccgttctgac gcgtattagt gcgatcatcg atagcgatga
    78721 agtatacgct tttctccgta agaatttgca gcgcatcgtg tttctggccg ggttcccacc
    78781 gtgtactgac ctggctgttt ccggcgcgcg ctggttttcg gacaaggcta ataaagatcc
    78841 ggttttccag ttcaaagcaa tgcaggttgt ctggcagtgt tatgacattg caaagatgat
    78901 cggttgtccg tacatgattg aaaatccggt cagcaaaata tcgacattct ggcgtaagcc
    78961 agatcacatc tttcaccctt acttcttcac tgcatattgt caggaagata actacaccaa
    79021 aaaaacatgc ctctggagcg gccagggctt tgtcatgcct gatgccctaa tggacgaatc
    79081 attaggcaag ccagataaca gaatccatgc cgcgccacca gggcctgaca gggctaattt
    79141 tcgaagtgct actccacatg gattcgcaaa ggcagttttc gaagcgaata agggggtgct
    79201 ctatgagtaa atctatagca agcatagtca tagaaaaaca ggatacgatg gctgaaatta
    79261 gctatatgcg caccattcgg actccggatg aatatgagcg tccgatcttc aaatgggtag
    79321 gcggtaaatt ctcagagttg cctacagtgc ttgagcatct accacacggc aagcggttaa
    79381 tagaaccgtt cgttggtggc ggttctgtat ttacgaatgc aggatttcgc cacaacctgc
    79441 ttaatgatat taacggtgac ctgattaact tctatcagac attgcagcga gaaggacatt
    79501 cgctcgtcac gctgtcatat agttttttcc aaaattacaa caacgctgac ggttacctcg
    79561 aagtgcgtga ggcatttaac agaggaaagt atgaccagct acatcatgct gccgcctttt
    79621 tgtaccttaa tcggcactgt tttaatggcg taacgcggta caaccaaaat ggcgagttca
    79681 acgtggggta tggcaaatac aaagcgccct acttcccaca tgcagagatg gaggcatttt
    79741 tggctgatga cgtactcaaa aacacgtcct ttgtatcagg tgactttgct ggcgtcatcg
    79801 aggcggctgg tgaaggcgat gtgatttttt gcgatccgcc gtatgaaccg ctgccggata
    79861 cagaagggtt taccagttat tcaggaaata gcttccgttt cgacgaacag aaacggctgg
    79921 tatctctatt ggtggaagcc caccagcgcg gcgctaaggt agtgattaca aatagtggtg
    79981 cgccaagcat ccgtgaacta tatgaaggaa acgggtttaa agtacatcat atggcagcca
    80041 gacggtcggt ttcctgcaag gcgtcaacac gtgtagttgc taacgatata attgcaataa
    80101 tgaagtaaaa aacgccgcag tagcggcgtt tactttttta tgtggcgaaa tacctattaa
    80161 cctaacttcg cccaggtatc acgcagccca acggtgcggt taaataccgg tttttccgcc
    80221 gtggaatggc ggctgtcgag gcagaaataa ccttcacgct caaactggaa tgctttaccc
    80281 gcaaccgcat ctttcagcga cggttcagca aagccctgtt tgatcaccag cgattccggg
    80341 ttaatcaccg acaggaaatc atccgcagca cctgggttag gcacgctgaa cagacggtca
    80401 tacaaacgga tttcaaccgg cagcgcatgt gccgcgctca cccagtgaat aacacctttg
    80461 actttacgac catcagccgg atctttgctt aaggtgtcgg cgtcataagt acagaagatg
    80521 gtggtgatat taccttcggc atctttctcg acgcgttctg ccttaatgac gtaagcatta
    80581 cgcagacgca cttctttacc cagcaccaga cgtttgtact gcttgttagc ttcttcgcgg
    80641 aaatcggcgc gatcgatc
//
LOCUS       DADMIB010000003        72128 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.003, whole genome shotgun sequence.
ACCESSION   DADMIB010000003 DADMIB010000000
VERSION     DADMIB010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 72128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 72128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..72128
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.003"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            40..1194
                     /locus_tag="JNZ89_000193"
     CDS             40..1194
                     /locus_tag="JNZ89_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY8934178.1"
                     /translation="MPSPRIRKMSLSRALDKYLKTVSVHKKGHQQEFYRSNVIKRYPI
                     ALRNMDEITTVDIATYRDVRLAEINPRTGKPITGNTVRLELALLSSLFNIARVEWGTC
                     RTNPVELVRKPKVSSGRDRRLTSSEERRLSRYFREKNLMLYVIFHLALETAMRQGEIL
                     ALRWEHIDLRHGVAHLPETKNGHSRDVPLSRRARNFLQMMPVNLHGNVFDYTASGFKN
                     AWRIATQRLRIEDLHFHDLRHEAISRFFELGSLNVMEIAAISGHRSMNMLKRYTHLRA
                     WQLVSKLDARRRQTQKVAAWFVPYPAHITTINEENGQKAHRIEIGDFDNLHVTATTKE
                     EAVHRASEVLLRTLAIAAQKGERVPSPGALPVNDPDYIMICPLNPGSTPL"
     gene            1345..2169
                     /locus_tag="JNZ89_000194"
     CDS             1345..2169
                     /locus_tag="JNZ89_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001238934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraE"
                     /protein_id="HAY8934179.1"
                     /translation="MRLNTTGIAARMMLSLDKKAIGEKLINGRQINPTPLQVRYPQGV
                     REVLGIMSEQLAISTADLTRILLEDALHNMFMPADNTAGNIISRIEYIMLSHDINAPL
                     LATLLSPWNIRSTVIQDPARLADYLSADALEHLAECFNLNPDWLNGHENYPIALSGEW
                     PDTADNFRMLINDSSNTEVIFWHSFPFAGNTKREYYGVILRQKKEINGSVIYPALSLS
                     PTILNDEKRKWLTEYTTRQNTTMSLRRVTLRPGLAGNLITGQILPVSLFNTSLLPW"
     gene            2255..3457
                     /locus_tag="JNZ89_000195"
     CDS             2255..3457
                     /locus_tag="JNZ89_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003557916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HAY8934180.1"
                     /translation="MMKKNHITRTIIASAVLFSFNAAAATSYFEARNDAMGGTGVASS
                     HYGVAPLANPALLTKHNSNDDFSLLLPSVGAQVADPDDVSNKADDVKDDWDLFDSAVD
                     NQHGVQQAAANLKHRLQEFRNINADAQVGVSAVAAMANDTLPFALMVKSYGTVSVNGK
                     VNDADLDYLDKVANGTITDVDKNALTSRAFGRAAVITDVGISFAKELETAGQKWSLGV
                     TPKYQRVDLFNYNVTVRDYDKDDFDGDKYHNTKNGFNADIGAYTDLNDNWTVGLVAQN
                     IIPRSIDTKVVNGFKETFKVRPQATAGVSWHNDLFTTALDVDLTPASGFTSDSKRQFA
                     SVGAEFNAWKWAQLRAGYRQNMASNSGSAFTAGVGISPFDVVHIDVSGLVGTDHDYGA
                     MAQLQFTF"
     gene            3517..4101
                     /locus_tag="JNZ89_000196"
     CDS             3517..4101
                     /locus_tag="JNZ89_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001542524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HAY8934181.1"
                     /translation="MMKPRSSYSKTAFILLFSVFLVAAVTKAKSSLPDITLEQAKEIN
                     ADNTVIFLFRHGEHCDRSDMPCYSDKSGITITGTEKAQQEGIKFATIFSEYDIYSSNA
                     VRTIQTAKFFSGKEPVVMDSLSDCNNDLYKTLESIARESHKRNIVIMTHNHCLSFLAR
                     DRLGKKFKPAYLDALIMHYDGTRLILDGKYNKEA"
     gene            4496..4954
                     /gene="traH"
                     /locus_tag="JNZ89_000197"
     CDS             4496..4954
                     /gene="traH"
                     /locus_tag="JNZ89_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001079808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer lipoprotein TraH"
                     /protein_id="HAY8934182.1"
                     /translation="MNRIIPAGCLAALFLAGCNSPSQHTPVPRNYGAASDVAVTRHTQ
                     YTLWDKGVFSGQLPVSTGSHLLTANSDRLSFDWEGDAIELLNELARVRGMQFNYNGVR
                     LPLPVNLHVRDMTFSNTLRLIEAQTAWRATIHQYPGLLQVSFMQPENRKK"
     gene            4951..5769
                     /gene="traI"
                     /locus_tag="JNZ89_000198"
     CDS             4951..5769
                     /gene="traI"
                     /locus_tag="JNZ89_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer lipoprotein TraI"
                     /protein_id="HAY8934183.1"
                     /translation="MKALTSLILPVILLTGCSSSPTISPGGVNTPPPDINAWLKPRSE
                     KPDSLSETRWKMLTDAGKTLGFRGGKAQRSWELIQALNARESTLNALYDFRPLISPEG
                     WLPPVIDEAQDVAHITPDQIRTSSRVWTIIRPERFVSNPPGWRDWLLRGLSTTATPGT
                     EGSVVPEDSVQRKVWETALRQGWQEGRQNADLTLEANQKTLTRDYRGMMLYSLLWRQG
                     MITRPDVSDQMQTVTGDGKKLVTGDRVRRLKNHAEFNLQKSHWRPLIGTEGGSR"
     gene            5766..6914
                     /gene="traJ"
                     /locus_tag="JNZ89_000199"
     CDS             5766..6914
                     /gene="traJ"
                     /locus_tag="JNZ89_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid transfer ATPase TraJ"
                     /protein_id="HAY8934184.1"
                     /translation="MNIPDEFGLFPFQRFTADELRHFFVWCAAHKVSDVDLTGGSPVS
                     VSRFGRRVRCSSATLPTTLMSSLIDELFGREVIPRVLAGNPVDRTIQINGDASGRYGL
                     KRGERIRLRSHLIQGTSGAEEKAISITMRVIPTEIPDILSMNIEPDLLEAMVCKSGLG
                     FVCGETGSGKSTLCSALYRYIMDNFPDAKIVTYEDPVEYILGNENDLLPPHQAEIGRD
                     VVSFAAGLRSAVRRNPEIIGVGEIRDNETADAAVQAGNTGHYCLSTMHTKSPGETLAR
                     LLGLFPPVIRDSMAWAVLSLLQFILVQVLVRTNDGGRKAVREYIVINDELRDNLSGMP
                     HAEWGHHIDAIIRQEKRRIRDQILEMYIRNEVDRREAILFIPPGELRS"
     gene            6911..7201
                     /locus_tag="JNZ89_000200"
     CDS             6911..7201
                     /locus_tag="JNZ89_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001542523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HAY8934185.1"
                     /translation="MKREGFWRYATPPVNIQGVPLPFTMIYLFICPFPSKTTFWICTG
                     IILFFVILDRSGWTVRTICTRIFSILRGAIASGRPWWYRHHTESPRDWTGLD"
     gene            7216..7767
                     /locus_tag="JNZ89_000201"
     CDS             7216..7767
                     /locus_tag="JNZ89_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001493807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HAY8934186.1"
                     /translation="MSGKKTIVTLLRVSLLACPLLFTTPSFAMIDTPSVKVGFSPEGS
                     ASALVLDTINSAESSIRMMAYSFTDPDVMHALAKAKKRGVDVRIVVDDKGNTNRASQE
                     AMKYINLLDIPLRTVDAFPIHHDKVIIVDGNTVETGSYNFSRAAARKNSENVVVLKNM
                     PDVAAQYLEHWQDRWNKGTDWRP"
     gene            7857..11624
                     /locus_tag="JNZ89_000202"
     CDS             7857..11624
                     /locus_tag="JNZ89_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001141546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY8934187.1"
                     /translation="MPSVSRYRTWLAVPADEIEDLKKAHPPMNGHTPVIWDKEHKLWF
                     ARPGADLSRLDRWLPRPQDVSMNGSDPVTEFAQVLENAGLVLKELPVMDGKIHRVPTA
                     DDKKGQKSGAYRGFLDGRPAGWYRDYRSADNSPITWTFSGGEQTDPRARLHLKAHSMQ
                     RREDAERELKAQYNRQAAYARRYINKWPQATAHEYLTRKGIQAAPGVRVNNKNELVIP
                     FSNRNGAIRSYQRIPVTGGKDARILIDSEKTGNWFALGTPRNGQPVLFAEGYATAASL
                     HEATGLPVLMTVDGGNMIAVAENARQKWTQSPFIFCADNDHAIRVNKGIVSATKAAEL
                     TGGSVIFPAFTDAEKAQGLTDFNDLDASRGRAAFQHVINAQLEHIGVSTPNSNTPEMR
                     EALVIGNLVFTPVHTEEKTMTPTEYPETSPDTGHSHDQGPSLPSATQQEQPAASSSNI
                     ADETQSFTSHATENNGKDERHADNVQAQTESSVVQDSPAESPASPESTTASAPDEPAH
                     PAEPPEKVVSVATDKDWREFEAELSQPEKNESQQESGTSPEIPAPAATPASPEDSPSS
                     ETMNESAEPSPSPDAVKEEMTVMTEPDDKQSTGISPDTPREEAVNHVTEDIPLQPEPF
                     LPESDGPEEYENYSAYQELMNNENPEHLQENSDMPSQPDTGHVQADESELQATTDTVE
                     PAVRDDPTPQQPVQSTSSSDNTSSFLDKARGFFTRKKTDSQAHENSDPTPSPETTTTT
                     PAPDSIVYAPERPDVPISLNLDEIIKSLEGEERADRTVLYKLDGKPAFIDRVNRLEMV
                     NGASNDDRSVLAALAVATDFYGGVIELTGSDAFKQKAMQLIIEHNIKVRMKFPDQRAA
                     LEKLRKEMAVGKDTVVTHKPTPELNRNTPEQPAVPDPVKEKEATQSPASPVAPEASTV
                     STVPASSPAEPGKTADAAQGEEPPGKLRPGESVTAVLHNFGRAEYAPGKGESFFVELK
                     NRSGSKLYWGEQLESLVKNHQKGDVVTLTLQNREQFILPGEQKARFRNKWSMESVTNG
                     ISVSHDNPDKGQRIQAIPVETFMKVAAQISQGWPEEMKALRMPENVGSHLFIGEDRHP
                     VSAPQNANQVTEITSAAPDKLTPVLGSVDKDTRELNLLLVQSADEHLQGVVRLNGTLY
                     PALATPSADNSQLVINALTDKGLRFAGYGEAVNHDADSTNRPAPELMQFHLKTREEPL
                     FAAVYTPEKQPDALYRNLGFEQSWQQWSNSQKPEDRQEKTLHQDLSHSPGR"
     gene            11642..11989
                     /locus_tag="JNZ89_000203"
     CDS             11642..11989
                     /locus_tag="JNZ89_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001629514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HAY8934188.1"
                     /translation="MNMHKSLVAVLGLILISSTASAATCRAGSAAQAGSNTGYERARA
                     AADAWSQRENDVSSSLQSCLSRIKKISINLPQFPSLDDILSQLENQVCDAVVDKVNEK
                     LPGNIDPWKDYNL"
     gene            11986..12678
                     /locus_tag="JNZ89_000204"
     CDS             11986..12678
                     /locus_tag="JNZ89_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000138553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraM"
                     /protein_id="HAY8934189.1"
                     /translation="MTENTEPSSPSHPAPDPEILKSTIRAMKQSEQRANNVPALIKAL
                     LCTGTCLLISITGNAIQYWHSTNVEREYFATDNGRLVRLAPTSQPAWSQNDAMAFGSQ
                     ALATAFNLDFVHYRSQISSLSPRFSDEGFVGYVNALQASNILETIKKEKMNLTATTGA
                     GVLVRQGQMSDGVWFWTFQYPVRMRLVGQTTSKPEQSFVFEITIQRVDPRLKPSGMEI
                     RQMISRNAGPNS"
     gene            12689..13672
                     /gene="traN"
                     /locus_tag="JNZ89_000205"
     CDS             12689..13672
                     /gene="traN"
                     /locus_tag="JNZ89_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001191879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TraN"
                     /protein_id="HAY8934190.1"
                     /translation="MQSRYLLSTLLLVCSAATSADNAGWQNARTPQTTNSASDHVQNA
                     SQNTGGVPATLVKGELPAPGQASPLVQDAARLDSELSADEIRSLRSLMADNERAINAP
                     ITSVVPRISSLTVNLSPGASLPLVRTAMNNLSVVTFTDINGSPWPQSDPPYNAAPKLF
                     DVQYNENMVTITPLRPWASGNISVYLKGLSVPVILNVTSGETDTPSSSQEMDSRLDLR
                     IPRQGPTSPVVSIPTDKIALHDATLQAFLDGIPPRDPSVKRLKFTGNVPDTTIWQHGD
                     DLLVRSRAMLRDEFEQTLSSADGTHLWKLPVTPLLTFSVNGQSIHVTPELE"
     gene            13675..14964
                     /gene="traO"
                     /locus_tag="JNZ89_000206"
     CDS             13675..14964
                     /gene="traO"
                     /locus_tag="JNZ89_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001272004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraO"
                     /protein_id="HAY8934191.1"
                     /translation="MSAEQDAGKSGKKLAALLGLGSIILFGGGYIAFSKLSGSNSDMQ
                     SAVNINSAASGGTRSVTETPHYRELLRADNERGAAAAARNNQTFIASLPQGLDIPDTQ
                     EKQQQPAAKPENYAHRQASGTPQEDRAASEKRMERLQKLIVRIKDQHPAGSTPTIATT
                     MWNKSPAETTGQNGTQQFALKNASLSTPVAEKGIQLIPALTRIPAYIDTAVDSDNPSS
                     KVIATIPAGPWAGATLFSPGVKLVGNGVEIHFDRMSWNGMDLKVNAYAQREDNLMSSV
                     ASNVNTRWFKHIILPSVLGGVGSIGTLYKDANTQVIQGNYGTVTGRVGMPSGEAVAGV
                     IAGGMAERGSQILTRQAESEPYKQVEVYQHEVVSILFVDPVMTNDARSSSLSSGISPS
                     VNRTSQAEQRSQARMQTAMEQRKAVMQRRYDEQPETP"
     gene            14964..15668
                     /gene="traP"
                     /locus_tag="JNZ89_000207"
     CDS             14964..15668
                     /gene="traP"
                     /locus_tag="JNZ89_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TraP"
                     /protein_id="HAY8934192.1"
                     /translation="MKPETEIDETGSFGEPEEKPAPFWKRSVWGISVATWGLCAVVLL
                     AAIWYLFLRAPSETGMPPFNDADAGVQTWQTTQESSPSVQSTETMTVRTGEDMSQLAR
                     DVKTELDNRDEKIQATLNMLHDSINKLGEAIKKDEEYAQETRRQLDDIRSRLNGIMTQ
                     KSVTESSSTPHPAKKKTSSVLNGMKIMSMETGMAWIRWQGSTWAVREGQTLGNVVIQR
                     IDPTTRTIITSAGTLR"
     gene            15668..16195
                     /gene="traQ"
                     /locus_tag="JNZ89_000208"
     CDS             15668..16195
                     /gene="traQ"
                     /locus_tag="JNZ89_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001055571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraQ"
                     /protein_id="HAY8934193.1"
                     /translation="MNMDALTAIENFASSIFSAGMDFLFTWGEFIGVISMITLFARAR
                     SAGPVKMSPGKFIAGMLTSCMLVSLPAMINAGGVQMGFRADSFGPIAYVQPQTFGAAA
                     GAANAVLSLAKLAGVGFVMNGISIWRKAGLDGHTALSASESVSKGNVKFIAGVLLVFI
                     DRVLNALLASIGIVF"
     gene            16246..16650
                     /gene="traR"
                     /locus_tag="JNZ89_000209"
     CDS             16246..16650
                     /gene="traR"
                     /locus_tag="JNZ89_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000086965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TraR"
                     /protein_id="HAY8934194.1"
                     /translation="MSRIRVVAARLYAAFIHAQLFVMSCRSKLTKFLLLIPMMLLPKA
                     VLADGDLADMVRNVEQGAKTAQSSSLTIAQFIGVILFLGGLIGLKKVGKQGGMGLASC
                     IVSIVIGAVLVAGPEMMSRSQKQLGISSISIG"
     gene            16714..16902
                     /gene="traS"
                     /locus_tag="JNZ89_000210"
     CDS             16714..16902
                     /gene="traS"
                     /locus_tag="JNZ89_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001277253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative conjugal transfer protein TraS"
                     /protein_id="HAY8934195.1"
                     /translation="MSAWSPEHITLRRTENGNVIAHDSRDDQEFIFAECCSDEIANII
                     LEAVKRYTSTEPAHATQH"
     gene            16886..17686
                     /gene="traT"
                     /locus_tag="JNZ89_000211"
     CDS             16886..17686
                     /gene="traT"
                     /locus_tag="JNZ89_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001164783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TraT"
                     /protein_id="HAY8934196.1"
                     /translation="MQHSIKDLWLYPFPEIDVVHTQEPLLPEPELTTPGRCICCRQNV
                     RHRFRLDDSWPLRQLTDTISDTRVRLNKATEHLDKLKKRGEPVATGEKEKYNTAVKAA
                     ERALEQARLSARRLSLRHVQKAEITSTESLSEKEQELFHEDGPPYSLCAFCHAWHSLN
                     GYAAAQGVMVWLPDLHPSTVVALNRRSLQEVFSNDKFRVRRGREALSALMQNRLAVED
                     KFRSFRPADFADVFRRYPPSGRSPLREKMNGIALILTPDSFIKKEYVD"
     gene            17776..20820
                     /gene="traU"
                     /locus_tag="JNZ89_000212"
     CDS             17776..20820
                     /gene="traU"
                     /locus_tag="JNZ89_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TraU"
                     /protein_id="HAY8934197.1"
                     /translation="MNINRFIFTIEDCLNTLSRFSVASSFVEYCDLRTVIGLDRQDRE
                     RRPWLNSPYIAATKRGEYLSVFEVSGAFREMDEASDQTGPGSLESLITSMSDSLNTAY
                     KNSGHKISCVFERDPEMGKEEIEDMVAPQKRSLANTGIQLQDVVDEKVTTLSPWLVRE
                     RCWLAIWSGPDLISNSDRTAHDELVRRLAERVPKARFAQSPWQWTLSALKIRHEAFLD
                     NVEQALRHSSDGLILRLLDIHEVGREIRRQTERYSTPRNWQPHLPEDAQPAGYRWTDD
                     ESVLHAPSLHLQLFNTQVTTQGNLVQAGGLWHGMVSITLPPQNLQTFNELVRAVPRAV
                     PWRIRMDLMPGGMKALNLKKTLLTYSSFISAVRPMYESVMTLAATDEKEPVCIMTIMA
                     STWGKTREICARNQAILKSAIEGWGVCGTTTTFGDPRRAWVNTILAASGGSGPVPLYP
                     PLSHAISLFPLNRAGSVWRGKGNLMLHTEDGSAFEVGLASSQQNKHTELAPGDPGLGK
                     SVLINTLSEIQISSAQKNLPFIAYIDKGYSAQGLVQLIRDSLPPERKDEAVGIILSND
                     PEYTRNLFDVMYGAKKPITPEKNFMSSVLCALCVDTGTGQPCNPGDTRQIINQLIELA
                     FKEYGENNPRLYRASTEELVDSALQDSGLYEKHDAAWWARSTWFEVRDMLHNAGYIMA
                     AQRAHYQAMPQLPEVSSMLGHTSLRDVFGTVQRDGSNELLLDYIRRALEQGHNDYPMI
                     SGYTRFMINPETRVIAVDLNNVAGDKTPAGRLKTGIMYLLAGQIAGGDFTLPQYRDEV
                     LKQLPREYHEIALKRINQLDQEVKTKVYDELHNARGIDFIWENLDTQEREQRKFAIRT
                     VLSTQYLRDYPESVLKSANTLWLIRYKPEDIPVLRDNFNVPEFMLKRFLKMPEGPAPD
                     GSGVPVLGVFRVKSGTLARILKFTVGPLELWALNSSPKDSALRKTLTNKLGSVRARKI
                     LAENFPRGSATSLIEHRAGQHNSDNVIEDLASELIRKQGYNL"
     gene            20820..21434
                     /gene="traV"
                     /locus_tag="JNZ89_000213"
     CDS             20820..21434
                     /gene="traV"
                     /locus_tag="JNZ89_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000337395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TraV"
                     /protein_id="HAY8934198.1"
                     /translation="MCTIHITPRCRRPARGQVFLKKLEVKGDSFSFTLPSRLFRLHPA
                     PNPRVIYASDARTQGKVTGMRLLLPSSTDELITTAIWQVSVPDEAPFDVQHVIQWILP
                     SPLASLMSDDTWLWPSVPGTPALSAGDWPVMDTDPSTLRRVRRRSFSIIDNRNRKGYI
                     TRRYQCFPLAPLPEDRKYDSLPDLVLHPEQETIKCKEKHYSQPL"
     gene            21401..22603
                     /gene="traW"
                     /locus_tag="JNZ89_000214"
     CDS             21401..22603
                     /gene="traW"
                     /locus_tag="JNZ89_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TraW"
                     /protein_id="HAY8934199.1"
                     /translation="MQRKTLLAALIAILSGTACQAHAYSVTVVASRPVEQQVVPRMEA
                     IKGVLSDILSTQTATGTAINQNSEKLASVIAQNGQATRQQMIFSNETQRLEEARKSFT
                     VPDSICSESASGIATESKSASASAASKLSKGGGVSNRNIRDRLASAANSPVREAYDGA
                     AIHASYCTEAEYARFGGTAVCPSVGEIPGGDSQVRSIYHGAGTADTPAALTWDQKQID
                     AATAYMKNTSRPSAGRALGKGEVNTQSGRTYVGLQNEYNGIIDSASNPQLTLIADSTP
                     NESTRKALAETLQSDSAAAYFDQVASPEAKARGYMSTREFEAFEAGRRYANTAYLVDL
                     QEMQGDNLLRELVRITAQMNWQLNDLKEQIRQGNVISGQQLALTARQYYEKQLGSLEK
                     TINQANAR"
     gene            22632..23216
                     /locus_tag="JNZ89_000215"
     CDS             22632..23216
                     /locus_tag="JNZ89_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001037983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraX"
                     /protein_id="HAY8934200.1"
                     /translation="MNKLPENSDQTKNVKKSPSITRIATRRIINIFVPLMETRLITNS
                     VQHMLKQQKSRLEKFRQVNNKKAQLCLSWEEALLASHMSVDDLDRRFRRRRTAWRLCC
                     WSLLAIALFLSGMLFAASSLPLMTLVRAISTLMLILSGVALCASRALIVTYRLWQLHE
                     RKVSEPEQGTFRDFLNDRNGWRNATLIAVTSKQY"
     gene            23313..25481
                     /locus_tag="JNZ89_000216"
     CDS             23313..25481
                     /locus_tag="JNZ89_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000698353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DotA/TraY family protein"
                     /protein_id="HAY8934201.1"
                     /translation="MKILLRALCAGLAISSLPAMASVTYQDIVSAATNPDDLSRQALV
                     TIFGDVVTNPLSTSDPTLIGSMFWVFNNIIAVLAIVWCIFISIRHVVRSGHQGQVFSV
                     GRDIVGILSFVAGFLMIVPTGNGWSLAQLIMLWGASIMGVGSANVMVQVAADNIANGY
                     SMTVQPVQASTRTAARGIFEMELCKYAVNAGLNDFNQTAKSSTSLMTESAKTASGNYT
                     VTVSNGSGICGTASLSVEGNGTTDQSTIGKFFNPFSKNEYSGVISAQRAAMDNMISDM
                     DNAASEFVTTFLEKRNSGNGTLPDIETRIQKAADEYERAVQKSLPTDNGEQSRKEALK
                     SYLTTYGWVTLGAWYQTFATANQRLAELADRAPAVTSMSSLGEVGDTDLFSAVMSAYR
                     TQLQNSSYTPPLGTVVSSSEQRMANAQDPKSALSEIMGPLVSLTNRIATETSGTGTTS
                     AQINPLIKMKNIGDITMVSAEGIWTIYTTARVVVAGGKDSILVKFFNSLTGAASMLTA
                     LFEALAPPVYFLLFLMFCAGFSLSIYLPFIPFIFWMTGIGNWIVSVLIGCTAGPLWAA
                     THLGTSEDRGSRAAYGYIYLIDSMIRPPIMVFGFFFASVAIIAVGTILNALFGAALVN
                     VQFNSLTGIFSLAGFLLIYARICTTTVAAIFALQAYLPDHVINFLGGRDGANTLGSMA
                     NSVKEIFIGGSRNIRHTPGMKTDRLKDNTKGSDDKDGIKG"
     gene            25552..26214
                     /gene="excA"
                     /locus_tag="JNZ89_000217"
     CDS             25552..26214
                     /gene="excA"
                     /locus_tag="JNZ89_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid IncI1-type surface exclusion protein
                     ExcA"
                     /protein_id="HAY8934202.1"
                     /translation="MKAKKETTDRFPTWWLFYYVLRKAYFFLGIPFFLFCALGFTEML
                     CSDRYFGNKVEDYVVTFGSWFLLLAPGIWMYSRAKTRREKIRKVVQTIKESGFYSPEK
                     GYEGLSLTQGAYFGIDLKNGTMLYVRIYPGNIMDVIGFDIHNFTRTVTDDKKLEIHTK
                     YINLPMVPVPSWCAHPETASNTMHAMASRGYDYPVDFPRLIQEKRKEWEQIAGMPVAE
                     VF"
     gene            complement(26286..26495)
                     /locus_tag="JNZ89_000218"
     CDS             complement(26286..26495)
                     /locus_tag="JNZ89_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000062602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HAY8934203.1"
                     /translation="MSMPPAIANTFLFEMMKSKSKDVTLAAIYALGEGRCQAENITRE
                     LHRLSQSDDMEIKIAAIKALGRIYR"
     gene            27987..28238
                     /locus_tag="JNZ89_000219"
     CDS             27987..28238
                     /locus_tag="JNZ89_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934204.1"
                     /translation="MSEKWSKEFDSCFQVGSIEEIADALEKRSGSEENALAMLAMTAF
                     TLMTRRGICEMQNVAPDGKGIRLELIGFRGNETIPDTLH"
     gene            complement(28310..28462)
                     /locus_tag="JNZ89_000220"
     CDS             complement(28310..28462)
                     /locus_tag="JNZ89_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001618166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HAY8934205.1"
                     /translation="MPQRTFLMMLIVICVTILCFVWMVRDSLCVLRLQQGNTVLVATL
                     AYEVKR"
     gene            28754..29962
                     /gene="trbA"
                     /locus_tag="JNZ89_000221"
     CDS             28754..29962
                     /gene="trbA"
                     /locus_tag="JNZ89_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000121273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TrbA"
                     /protein_id="HAY8934206.1"
                     /translation="MSYNRQPVAEDPMQIWGAVGVLLILLLFVIWLFLPEVVYASCLI
                     LHTLWGLVDWGPFHNYAAPRYNLLAMTGNNAANISYSQWVNVMEQTIGILWMYLLPVT
                     LWCLWEWYQHPGQSRFTRRPVDITRLPHIFASLSPAIAPVLADGDPEKLFHGGKRPER
                     RVALTPEAFVEQHTLITNMQLDVAAARRCFMAQLGKPLTSWKDMAPHEKALFAIFGLQ
                     YFLDDRKAALKLMDTLNLSCRIKSKRDSGKFCTPVYSLAKSAFQRVIKSNGAQQWLKQ
                     HRYVRSGLVWLYAHDLRLTPPNWIWLKGVDRTLFYALHRANTTKGFIEGAGVVAVARA
                     EAEAMRFGLPCPEPCVDEAVEGLRRDMLSLGLIWDEPQPDRDRKRRILTNWSLTDDIL
                     PRTPATDNEF"
     gene            29981..31051
                     /gene="trbB"
                     /locus_tag="JNZ89_000222"
     CDS             29981..31051
                     /gene="trbB"
                     /locus_tag="JNZ89_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000151583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type conjugal transfer protein TrbB"
                     /protein_id="HAY8934207.1"
                     /translation="MTIEYFATRIAKHISVQAIWPDGRTEIIAVLPRDALSGLVTRNN
                     QLIHIAFDAMGTRNKETVLIDKQEHNADQILTAIDSCLRLEYLMERRFSRTPLFRGII
                     ASVVLFVMATIGFSLFRYVDRVFWDDTTPEAVQTAGEPRLLPPHLNHTVPLNEGIQLP
                     VPPKKDVQVPEKTITSKNPEAAAARHNLATVLKRNADRGMFTINLSSGHERTLFAFLD
                     PACPNCRLLEPALKRLASDFNVVIYPVSVIGGEESTDRVAPLLCEKDAQKRAAGWHRL
                     YSADNGMMTPSEETTPADETCLKAARAAIDVNNVAFRKFGFAGTPWVLSDTGWHLPTG
                     ILQETGTLNLFLKTTDSESDHE"
     gene            31044..33335
                     /locus_tag="JNZ89_000223"
     CDS             31044..33335
                     /locus_tag="JNZ89_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbC"
                     /protein_id="HAY8934208.1"
                     /translation="MSEHRVNPELLHRTAWGNPVWNALQSLNIYGFCLVASLVASFIW
                     PLALPACLLFTLITMLVFSLQRWRCPLRMPMTLECADPSQDRMIKRSLFSFWPTLFQY
                     EVILESPASGIFYVGYQRVRDIGRELWLSMDDLTRHIMFFATTGGGKTETIFAWAINP
                     LCWARGFTLVDGKAQNDTARTIWYLARRFGREDDVEVINFMNGGKSRSEIILSGEKTR
                     PQSNTWNPFCYSTEAFTAETMQSMLPQNVQGGEWQSRAIAMNKALVFGTKFWCVREGK
                     TMSLQMLREHMTLEGMAKLYCRGLDDQWPEEAIAPLRNYLQDVPGFDLSLVRTPSAWT
                     EEPRKQHAYLSGQFSETFSTFTEAFGDIFAEDSGDIDIRDSIHSDRILMVMIPALDTS
                     AHTTSALGRMFITQKSMILARDLGYRLEGTDSDALEVKKYKGRFPYLCFLDEVGAYYT
                     DRIAVEATQVRSLDFALILMAQDQERIEGQTTATNTATLMQNTGTKFAGRIVSEGSTA
                     RTLKSAAGEEARARMNNLQRQDGIFGESWIDSPQISILMESKIDVQELIELHPGEFFS
                     IFRGETVPSASFFIPDNEKSCSSDPVVINRYISVDAPRLDRLRRLVPRTAQRRIPSPE
                     NVSAIIGVLTAKPSRKRRKIRTEPHTIVDTFQQRIAGRQAAMAMLEEYDTDINARESA
                     LWETAVNTLKTTTREERRIRYITLNRPELPETKEENQISVRAERAGINLLTLPQDNNH
                     LTGRPVNGFHHKKTNRPDWDGMY"
     gene            complement(33372..36071)
                     /gene="nikB"
                     /locus_tag="JNZ89_000224"
     CDS             complement(33372..36071)
                     /gene="nikB"
                     /locus_tag="JNZ89_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type relaxase NikB"
                     /protein_id="HAY8934209.1"
                     /translation="MNAVIPKKRRDGKSSFEDLVSYVSVRDDMTDEELNLSSSSQAEQ
                     PHRSRFSRLVDYATRLRNESFVALVDVMKDGCEWVNFYGVTCFHNCTSLETAAADMEY
                     IAQQAHYAKDNTDPVFHYILSWQAHESPRPEQIYDSVRHTLKSLGLGEHQYVSAVHTD
                     TDNLHVHVAVNRVHPVTGYLNCLSWSQEKLSRACRELELKHGFAPDNGCWVHAPGNRI
                     VRKTAVERDRQNAWTRGKKQTFREYVAQTAVAGLRSEPVHDWLSLHRRLAEDGLYLSQ
                     MDGKFLVMDGWDRNREGVQLDSFGPSWCAEKLMKKMGDYTPVPKDIFSQVEAPGRYNP
                     DFIAADVRPEKIAETESLQQYACRHLGERLPEMAREGRLENCQAIHRTLAEAGLWMRV
                     QHGHLVICDGYDHNQTPVRADSVWSLLTLDNVNQLDGGWQPVPTDIFLQVTPTERFRG
                     RRMESCPATDKEWHRMRTGTGPQGAIKRELFSDKESLWGYSISHCSPQIEEMITQGEF
                     TWQRCHELFAQQGLMLQKQHHGLVVVDAFNHEQTPVKASSIHPDLTLGRAEPQAGPFV
                     SAPADLFDRVQPESRYNPELAVSDRYGVSSKRDPMLRRQRREARAEARADLRARYLAW
                     REQWRKPDLRYGERCREIHQACRLRKSHIRAQYDDPALRKLHYHIAEVQRMQALIRLK
                     EDIRDERQKLIADGKWYPPSYRQWVEIQAAQGDRAAVSQLRGWDYRDRRKDKSRTTTT
                     DRCVVLCEPGGTPVYGNTGDLEARLQKNGSVRFRDRRTGEFVCTDYGDRVVFRNHHDR
                     NALADKLDLIAPVLFGRDPRMGFEPEGNDKQFNQVFAEMVAWHNVTGRTGHEDYRITR
                     PDVDHHREGSERYYRDYIAANSNDDASLPPPEQDKRWEPPSPG"
     gene            complement(36082..36414)
                     /gene="nikA"
                     /locus_tag="JNZ89_000225"
     CDS             complement(36082..36414)
                     /gene="nikA"
                     /locus_tag="JNZ89_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001283947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncI1-type relaxosome accessory protein NikA"
                     /protein_id="HAY8934210.1"
                     /translation="MSDSAVRKKSEVRQKTVVRTLRFSPVEDETIRKKAEDSGLTVSA
                     YIRNAALNKRINSRTDDAFLKELMRLGRMQKHLFVQGKRTGDKEYAEVLVAITELTNT
                     LRKQLMEG"
     gene            36648..36983
                     /locus_tag="JNZ89_000226"
     CDS             36648..36983
                     /locus_tag="JNZ89_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000157082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein MobC"
                     /protein_id="HAY8934211.1"
                     /translation="MASKKFYSDDDIQLAKAALSELPDLTAQRKTLRDFLDAIRDDII
                     VLIRTKGYTLADVRDTLKNAGYEVGEKALRDIIREAESKKPSRRSSSKTAPKKTDSGR
                     KDGIDMNNN"
     gene            complement(37068..37916)
                     /locus_tag="JNZ89_000227"
     CDS             complement(37068..37916)
                     /locus_tag="JNZ89_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001401764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
                     /protein_id="HAY8934212.1"
                     /translation="MNQTLPTADLNTAGTTDVIPSVAIDRIIAQRNEGIALFMQAMEC
                     LATARKILLDASGDIFLYGFEDCVTDSVRRIDKPEEAKRNITRLADRKIWERLMTDTG
                     MYTFMSSCQRDEWNSQLMSDTCPEITLDNVLATFRHLNACKMQTFEQGLIDVYRKLSW
                     DYRTNNPCRLGKKIIIENLLYRWSNGRVTLDCSGREALDDLVRPFYLLEGRNVPDFRN
                     SIGAQYGEFLGNGDNVGKLLEGEYFTVRGYQKGTVHIVFNRSDLVEKLNDIIARHYPG
                     VLPPRV"
     gene            38497..38748
                     /locus_tag="JNZ89_000228"
     CDS             38497..38748
                     /locus_tag="JNZ89_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003980153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8934213.1"
                     /translation="MTGWELRIWRKSMLWSREKAAREFGVTQRTWHAWENAEQVDVTV
                     WRTTQALSVRDLLPHMQGMRKADIIRRLENELGETAGNV"
     gene            complement(38779..39060)
                     /locus_tag="JNZ89_000229"
     CDS             complement(38779..39060)
                     /locus_tag="JNZ89_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934214.1"
                     /translation="MRTAKPGKIPGFFASRSRENSMTLAERLIQKGFDEGFKEGFKEG
                     FKEGFKKGALEVAREAACRLRDMGWTPERIQEATGLSGEELKKLFPDEQ"
     gene            complement(39060..39962)
                     /locus_tag="JNZ89_000230"
     CDS             complement(39060..39962)
                     /locus_tag="JNZ89_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012548938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8934215.1"
                     /translation="MSKKKTTTTPTPHDAAFRSFLANPDVARDFLELHLPAEYRQLCD
                     LSTLKLEPATFVEPDLHQYASDILWSVKTTGGEDGYVYTLIEHQSTENLYMPFRMLRY
                     SVAAMQRHLEQHKTLPLVIPVLFYHGERSPYPYSMNWLDCFENPALAAKIYTNPFPLV
                     DITVVDDNEIMNHRRMAALTLLMKHIRHRDMMELLDKLPQVMVEISDEQVRVLIHYIV
                     NAGDSVSPEFMRALAERLPQHEDKLMTIAERLEQKGRQEGRMEGALEKALAIACQLQK
                     MGMTPEQIKQATGLSDDELKKITH"
     gene            complement(40027..40293)
                     /locus_tag="JNZ89_000231"
     CDS             complement(40027..40293)
                     /locus_tag="JNZ89_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934216.1"
                     /translation="MRPSIIFATAEYVKRLREECLRENKPLHRHTRFRRQELAQDEIN
                     PDVLAMSGHIARRCSEQKRVRIPAMKVSEWGHLLRALEIERVCH"
     gene            complement(40387..40821)
                     /locus_tag="JNZ89_000232"
     CDS             complement(40387..40821)
                     /locus_tag="JNZ89_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000218847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="post-segregation killing protein PndC"
                     /protein_id="HAY8934217.1"
                     /translation="MTVSSTISVFCRDGVFRTVYCHLHGEPTWNGRILHTHYATGQQA
                     EALVEHGDIRCLGPRCDKPAGHTLQNPVDGVTAYYGRDSGFRMDSEAREYRSFREAIA
                     TESTEEVRFHYVFIDGYWKVMYRTPEGWKMKALALALRRCPK"
     gene            complement(41550..42050)
                     /locus_tag="JNZ89_000233"
     CDS             complement(41550..42050)
                     /locus_tag="JNZ89_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein ArdA"
                     /protein_id="HAY8934218.1"
                     /translation="MSVVAPAVYVGTWHKYNCGSIAGRWFDLTTFDDERDFFAACRAL
                     HQDEADPELMFQDYEGFPGNMASECHINWAWVEGFRLARDEGCEEAYRLWVEDTGETD
                     FDTFRDAWWGEADSEEAFAVEFASDTGLLADVPETVALYFDYEAYARDLFLDSFTFID
                     GHVFRR"
     gene            complement(41971..42344)
                     /locus_tag="JNZ89_000234"
                     /pseudo
     CDS             complement(41971..42344)
                     /locus_tag="JNZ89_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001332439.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1472 domain-containing protein"
     gene            complement(42497..43672)
                     /gene="tnpB"
                     /locus_tag="JNZ89_000235"
     CDS             complement(42497..43672)
                     /gene="tnpB"
                     /locus_tag="JNZ89_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000942659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family element transposase accessory
                     protein TnpB"
                     /protein_id="HAY8934219.1"
                     /translation="MLRATKIRIYPTPEQAAFLNAQFGAVRFAYNKALHIKKHAYQRH
                     GVNLSPRNDLKPLLSVAKKSRKYAWLKEFDSMALQQAVINIDVAFSNFFNPKLKARFP
                     TFKRKHGKQSSYHCVGIKVLDNAIKIPKLAPIEARLHRELHGKLKSITVTRSATGKYY
                     ASILCDDGASAPEKPTYLKEEKITGLDMGLEHYAITSDAVKVPNPRHLINVSRNLRRK
                     QKALSRKQKGSANRKKARIRLAALHERVANARADFQHKLSRAIVDENQAVIVETLKTA
                     NMMKNHNLARAIGDAGWHSFITKLEYKAATKGVHLVKLDQWFASSKTCHCCGYKMPEM
                     PLHKRIWRCPECGAEHDRDINAALNIRQKGILELKAAGLVVSAHGGQRKSVAQTVAA"
     gene            complement(43802..44521)
                     /locus_tag="JNZ89_000236"
     CDS             complement(43802..44521)
                     /locus_tag="JNZ89_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001723065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid SOS inhibition protein A"
                     /protein_id="HAY8934220.1"
                     /translation="MSARSRALIPLSAEQQAAMQAVAVTEQRRRQGRTLSAWPYASAF
                     FRCLNGSRRISLTDLRFFAPALTKEEFHGNRLLWLAAVDKLIESFGEVCVLPLPSDAG
                     HRLFPSVPFREGERRRQKTTLTEQKYSRQREREAERRELEYQTCFAQAQIDLAFHTPA
                     TVGSWLSRWSGVVEEHDLETIFWGWCGRFPSLSSFDRFFWQEEPLWRLIFEAGEAGRG
                     APVQIRALEQWMIPNKLENAI"
     gene            complement(44518..44952)
                     /gene="psiB"
                     /locus_tag="JNZ89_000237"
     CDS             complement(44518..44952)
                     /gene="psiB"
                     /locus_tag="JNZ89_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000845897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugation system SOS inhibitor PsiB"
                     /protein_id="HAY8934221.1"
                     /translation="MKTELTLNALQSMNAQEYEDIRAAGSDMRRNLTHEVMREVDAPA
                     NWMMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSPGDVSQLWMLVLVNCGGQPFAVV
                     QVQHIFTPVAISHTLALAATLDAQGYSVNDIIHILMAEGGQA"
     gene            complement(45007..46965)
                     /locus_tag="JNZ89_000238"
     CDS             complement(45007..46965)
                     /locus_tag="JNZ89_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000117326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HAY8934222.1"
                     /translation="MPVTKCEPETTRKASRKSAKTQETVLSALLAQTEEVSVPLASLI
                     KSPLNVRTVPYSAESVSELAESIKGVGLLQNLVVHALPGDRYGVAAGGRRLAALNMLA
                     ERNILPADWPVRVKIIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQTG
                     DLLGYSPRHVQRMLKLADLAPVILDALAEDRITTEHCQALALENDTARQVQVFEAACQ
                     SGWGGKPDVRVIRNLITESEVAVAGNSKFRFVGADAFSPDELRTDLFSDDEGGYVDCV
                     ALDAALLEKLQAVAEHLREAEGWEWCAGRMEPVGECREDAGTYRCLPEPEAVLTEAEE
                     ERLNELMTRYDALENQCEESDLLEAEMKLMRCMAKVRAWTPEMRTGSGVVVSWRYGNV
                     CVQRGVQLRSEDDAADDADRTEQVQEKASVEEISLPLLTKMSSERTLAVQAALMQQPD
                     KSLALLAWTLCLNVFGSGAYSKPAQISLECKHYSLTSDAPSGKEGAAFMALMAEKARL
                     AALLPEGWSRDMTTFLSLSQEVLLSLLSFCTACSIHGVQTRECGHTSRSPLDTLESAI
                     GFHMRDWWQPTKANFFGHLKKPQIIAALNEAGLSGAARDAEKMKKGDAAEHAEHHMKD
                     NRWVPGWMCAPHPQTDATERTDNLADAA"
     gene            complement(47024..47257)
                     /locus_tag="JNZ89_000239"
     CDS             complement(47024..47257)
                     /locus_tag="JNZ89_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000005982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF905 domain-containing protein"
                     /protein_id="HAY8934223.1"
                     /translation="MSEYFRILQGLPDGSFTREQAEAVAAQYRNVFIEDDHGEHFRLV
                     VRNNGALVWRTWNFEDGAGYWMNHAIRDFGILK"
     gene            complement(47315..47842)
                     /locus_tag="JNZ89_000240"
     CDS             complement(47315..47842)
                     /locus_tag="JNZ89_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HAY8934224.1"
                     /translation="MSARGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDK
                     QTGEMREQTEWHRVVLFGKLAEVAGEYLRKGAQVYIEGQLRTRSWEDNGITRYVTEIL
                     VKTTGTMQMLGSAPQQNAQAQPKPQQNGQPQSADATKKGGVKTKGRGRKAAQPEPQPQ
                     PPEGEDYGFSDDIPF"
     gene            complement(48194..48541)
                     /locus_tag="JNZ89_000241"
     CDS             complement(48194..48541)
                     /locus_tag="JNZ89_000241"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934225.1"
                     /translation="MRGAAPAALPARLSGQKVVYGCMQGTGVIFRDTVTVSGCLLLRP
                     LRLPAAWRHPVVRPDSDRQLLAHPPVSAEPAGAVSGCRYGPMRENPGLQRPFRSRRPC
                     RAVTCAPCTPDGV"
     gene            complement(48612..48803)
                     /locus_tag="JNZ89_000242"
     CDS             complement(48612..48803)
                     /locus_tag="JNZ89_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934226.1"
                     /translation="MNISTETREILRNYKAVINARRREMGQKPLTTAQIVDEICDFVV
                     NQQAVFLGGHYILQGSRNR"
     gene            complement(48800..49222)
                     /locus_tag="JNZ89_000243"
     CDS             complement(48800..49222)
                     /locus_tag="JNZ89_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1380 domain-containing protein"
                     /protein_id="HAY8934227.1"
                     /translation="MYCTVKEIIREVLDTDVPDSECVFAVVLTRGDVRHIAQDWNLPD
                     DELETVMQRLDDAFEHGADVSVVHDVVRELMEEKRVSRQVTVPAVMLEKVMALAGSEM
                     KRLYAVGSENGGDGDAFVREEREAMDVVLQALDGEHMS"
     gene            complement(49269..49694)
                     /locus_tag="JNZ89_000244"
     CDS             complement(49269..49694)
                     /locus_tag="JNZ89_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001198918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HAY8934228.1"
                     /translation="MQYAKPVTLNVEECDRLSFLPYLFGNDFLYAEAYVYALAQKMMP
                     EYQGGFWHFIRLPDGGGYMMPDGDRFHMVNGANWFDRTVSADAAGIILTSLVINRQLW
                     LYHDSGDAGLTQLYRMRDAQLWRHIEFHPECNAIYAALD"
     gene            complement(49667..50239)
                     /locus_tag="JNZ89_000245"
     CDS             complement(49667..50239)
                     /locus_tag="JNZ89_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YubH family protein"
                     /protein_id="HAY8934229.1"
                     /translation="MCCVYRMNRPAAGLTVVFCGRWSGKPGPKSAAWLMPWQKSGNDD
                     TGGVNPRLFPAGPRTEHKGSRRRLRFTRPCRAWPCGFSVMWPQRRVRAVPCLHLSRAG
                     RDARVRFAAAVTRSLLPVCRDFPVVHPLRFRGLTLQLPPAVCVRLRLPLRPVHPRLIA
                     RLLWRHGTARCRGICEQRRKTSCNMRNLSL"
     gene            complement(50124..50933)
                     /locus_tag="JNZ89_000246"
                     /pseudo
     CDS             complement(50124..50933)
                     /locus_tag="JNZ89_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001476318.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(50933..51367)
                     /locus_tag="JNZ89_000247"
     CDS             complement(50933..51367)
                     /locus_tag="JNZ89_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001562898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1380 domain-containing protein"
                     /protein_id="HAY8934230.1"
                     /translation="MYGTCEILCRELAAKYPADTPLMLVVWSPEEIQALADGMDISLS
                     DHEIRTVLARLEDIPEDQRIESGISSGVAMEIISNVRENRQVTVPAELLASLIQTAEQ
                     ALWKREWAARDNGLAVPECVTRRQAVINQARTLLKNNTHENN"
     gene            complement(51379..51600)
                     /locus_tag="JNZ89_000248"
     CDS             complement(51379..51600)
                     /locus_tag="JNZ89_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934231.1"
                     /translation="MNYAGHEKLRAEVAEVANAMCDLRTTMNEMERRYSFNADTLPER
                     LVRQTLFRANRLLMEAYTEILELDSCFKD"
     gene            complement(51601..52284)
                     /locus_tag="JNZ89_000249"
     CDS             complement(51601..52284)
                     /locus_tag="JNZ89_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858331.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase"
                     /protein_id="HAY8934232.1"
                     /translation="MSRFVLGNCIDVMARIPDNGIDFILTDPPYLVGFRDRQGRTIAG
                     DKTDEWLQPACNEMYRVLKKDALMVSFYGWNRVDRFMAAWKNAGFSVVGHLVFTKNYT
                     SKAAYVGYRHECAYVLAKGRPALPQKPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESF
                     THPNAIVLDPFAGSGSTCVAALQSGRRYIGIELLEQYHRAGQQRLAAVQRAMQQGAAN
                     DDWFMPEAA"
     gene            complement(52361..52672)
                     /locus_tag="JNZ89_000250"
     CDS             complement(52361..52672)
                     /locus_tag="JNZ89_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858330.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934233.1"
                     /translation="MKYDGDGRATARFFSDKGCRRAPLFTAPADAARHKRCLWSVSRV
                     RRARDGRFYRSRLASVTVYASLSPFSDERPSSRFRGIFSPSKRRRLRYSTVGLTRYRT
                     R"
     gene            complement(52669..53640)
                     /locus_tag="JNZ89_000251"
     CDS             complement(52669..53640)
                     /locus_tag="JNZ89_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1281 domain-containing protein"
                     /protein_id="HAY8934234.1"
                     /translation="MRHGLMEAACERRIPMPNWCSNRMYFSGEPAQIAEIKRLASGAV
                     TPLYRRATNEGIQLFLAGSAGLLQITENIRSEQCPGVTAAGRGAVSTENIAFTRWLTH
                     LQNGVLLDEQNCLMLHELWLQSGTGQRRWEGLPDDVRETITVHFTAKRGDWCDIWGSE
                     DVSVWWNRLCDNVVPEKTMPFDLLTVLPTRLDVEVNGFNGGVLNGVPSAYHWYTERYG
                     VKWPCGYDLNISSQGDNCIQVDFDTPWCQPESDVVAALSRRFGCTLEHWYAEQGCNFC
                     GWQLYERGELVDVLWGELEWSSPTDDDELPEVTGPAWIVDKVAHYGG"
     gene            53989..54237
                     /locus_tag="JNZ89_000252"
     CDS             53989..54237
                     /locus_tag="JNZ89_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein ImpC"
                     /protein_id="HAY8934235.1"
                     /translation="MIRIEILFDRQSTKNLKSGTLQALQNEIEQRLKPHYPEIWLRID
                     QGSAPSVSVTGARNDKDKERILSLLEEIWQDDSWLPAA"
     gene            54234..54671
                     /gene="umuD"
                     /locus_tag="JNZ89_000253"
     CDS             54234..54671
                     /gene="umuD"
                     /locus_tag="JNZ89_000253"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001536590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HAY8934236.1"
                     /translation="MSTVYHRPADPSGDDSYVRPLFADRCQAGFPSPATDYAEQELDL
                     NSYCISRPAATFFLRASGESMNQAGVQNGDLLVVDRAEKPQHGDIVIAEIDGEFTVKR
                     LLLRPRPALEPVSDSPEFRTLYPENICIFGVVTHVIHRTRELR"
     gene            54671..55945
                     /locus_tag="JNZ89_000254"
     CDS             54671..55945
                     /locus_tag="JNZ89_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001566943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HAY8934237.1"
                     /translation="MFALADINSFYASCEKVFRPDLRNEPVIVLSNNDGCVIARSPEA
                     KALGIRMGQPWFQVRQMRLEKKIHVFSSNYALYHSMSQRVMAVLESLSPAVEPYSIDE
                     MFIDLRGINHCISPEFFGHQLREQVKSWTGLTMGVGIAPTKTLAKSAQWATKQWPQFS
                     GVVALTAENRNRILKLLGLQPVGEVWGVGHRLTEKLNALGINTALQLAQTNTAFIRKN
                     FSVILERTVRELNGESCISLEEAPPAKQQIVCSRSFGERITDKDAMHQAVVQYAERAA
                     EKLRGERQYCRQVTTFVRTSPFAVKEPCYSNAAVEKLPLPTQDSRDIIAAACRALNHV
                     WREGYRYMKAGVMLADFTPSGIAQPGLFDEIQPRKNSEKLMKTLDELNQSGKGKVWFA
                     GRGTAPEWQMKREMLSQCYTTKWRDIPLARLG"
     gene            complement(55947..56363)
                     /locus_tag="JNZ89_000255"
     CDS             complement(55947..56363)
                     /locus_tag="JNZ89_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase"
                     /protein_id="HAY8934238.1"
                     /translation="MSDENKSRRCSFELFPDERTGDKIADELIANEKLKERGRFMRAM
                     LVTGAAFAAIDKRLPLLISELLTENTTLDDINKVISSVIPGAFSVEKKLLELLEKQSG
                     LHTSVDCSTPLTEQSLSRNDGEDQTRRNAENMFGDD"
     gene            complement(56356..57336)
                     /locus_tag="JNZ89_000256"
     CDS             complement(56356..57336)
                     /locus_tag="JNZ89_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001401593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase"
                     /protein_id="HAY8934239.1"
                     /translation="MKIFIDDGSTNIKLAWLEDGDVKTLISPNSFKPEWSFSLLDDAA
                     PANYEIDGEKFSFDPLSADAVVTTETRYQYSDVNVVAIQHALQQTGLKAQPVDVIVTL
                     PISEYLDANNQKNKQNIERKKKNVMREVRVQGSDAFVIRSVSVLPESIPAGFSVLAGL
                     EDDESLLIVDLGGTTLDVSHVRSKMTGITKTWCDPNIGVSLITSGVKEQMAVHANTRV
                     SSFQADNIIVHRNEPDYLSRRIYNAEQRESIINVINERQKLLIKRVNDVISRFTDYTH
                     VMCVGGGAEIVAEAVKNLTKVPDERFYLSSSPQFDLVMGMIKMKGGVTNE"
     gene            complement(57750..58058)
                     /locus_tag="JNZ89_000257"
     CDS             complement(57750..58058)
                     /locus_tag="JNZ89_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000030202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone GroEL"
                     /protein_id="HAY8934240.1"
                     /translation="MSKAKFSAQAEKLKNLVDSARLQTSSSAVTATAPSQPNEGAEEV
                     SGRPVAARTKAKNLKAIPLSYFEAHAELKATSKTSLDFSSYIIEAIREKLERDGAIGQ
                     "
     gene            complement(58145..58789)
                     /locus_tag="JNZ89_000258"
     CDS             complement(58145..58789)
                     /locus_tag="JNZ89_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001144037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HAY8934241.1"
                     /translation="MPVIANTHPKGGVGKTTSSVNIVGEMKSDTVDLDTHTGLSIILG
                     LRPEGKEISVKVPKTVDELIEIMTPYKNSDKTLLIDCGGFDSDLTRTAIAFADCVIVP
                     SKDSLTERIGLMHFDGVLDEISSIMGTDITAHLYLCKVNPNKKKFPKLDAILPSFKHL
                     KLMKSRISARAEFEDVIETGMGITESVHGRYSAGGKEVIALIEEINHLIENNKQ"
     gene            complement(58969..59748)
                     /locus_tag="JNZ89_000259"
     CDS             complement(58969..59748)
                     /locus_tag="JNZ89_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001164196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase family protein"
                     /protein_id="HAY8934242.1"
                     /translation="MQHLPAPIHHARDAAQLPVAIDYPAALALRQMSMVHDELPKYLL
                     APEVSALLHYVPDLRRKMLLATLWNTGARINEALALTRGDFSLTPPYPFVQLATLKQR
                     TEKAARTAGRMPAGQQTHRLVPLSDAWYVSQLQTMVATLKIPMERRNKRTGRTEKARI
                     WEVTDRTVRTWIGEAVAAAAADGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMG
                     HKSISSTEVYTKVFALDVAARHRVQFSMPESDAVSMLKRIP"
     gene            complement(59750..60163)
                     /locus_tag="JNZ89_000260"
     CDS             complement(59750..60163)
                     /locus_tag="JNZ89_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001536595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934243.1"
                     /translation="MFFIENEGQAVAGTDYWQSVQAQAGYVYLSWNAGAARLLVPDAA
                     KHLLREMRGAEYVIISKGTLHGRDALELVFEDGSDAPFVIHMLSEQCDRLLPENNQGG
                     GFVVTVWTRGGNQLRYPGKYRVVENLPDVSPWSEH"
     gene            60695..61621
                     /locus_tag="JNZ89_000261"
     CDS             60695..61621
                     /locus_tag="JNZ89_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934244.1"
                     /translation="MSEKEHDMTNDGGESVTYTLRNIPADTDRVITDLASHARKPKAT
                     FLREFLEDSFRDVIDSFALKNPLIASLDEELASYLDAKVMEQRYQSHFITRWNQEYQK
                     LLGISTEEELRRLVLNNTPFLQVRADQVLKGWKNIPRGISLTFSLFAEIAGRDRETID
                     QAWKNIFYSQLREKKHRFYQDIEAIRALKKLPALTGDSWTRDGITVRIYRPENYARGA
                     WRVTLSLPENYATQMWNIPFPELEYRLFTADPGYSALISAEPDRWDKAFRFVDGVCEL
                     HLYTNGVEEDHNPTPLGDVAQALINVVEENLL"
     gene            61666..61920
                     /locus_tag="JNZ89_000262"
     CDS             61666..61920
                     /locus_tag="JNZ89_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000678527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934245.1"
                     /translation="MKGRQSRYVTGGESFAEIARLPSGAVVRLCLNTGLEDALREASK
                     SLKSAFTRSGRKCRLSAGTAQGPFTGRRQGVATHLFVSVL"
     gene            62419..62763
                     /locus_tag="JNZ89_000263"
     CDS             62419..62763
                     /locus_tag="JNZ89_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000793307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="abortive infection protein"
                     /protein_id="HAY8934246.1"
                     /translation="MKNLLDTEGTVLFPFQTEIHFIWTIFSTVKRLVIGTRDHICQKQ
                     YWSACLCILLLMAYVGLCAAVVWFVVPWLKAFIVSKFAVSALWVTPVKRGLLWGIGKV
                     VTATCRRFTLLK"
     gene            complement(62939..63940)
                     /locus_tag="JNZ89_000264"
     CDS             complement(62939..63940)
                     /locus_tag="JNZ89_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000785695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4238 domain-containing protein"
                     /protein_id="HAY8934247.1"
                     /translation="MADPFNLQTDVVRQHTVPRFLLKHFSTPGKGKRQRLYAFDKAAG
                     RAYATTPDDATVRNTFYNLDNHPDRLSLEPLLGIYEHHAAPVIAALLAHRDIRRLTDD
                     ERYRLAVFVAVQRARTFGELERISGMISVLTDKMEAIGSTKEQAMETLGLSSGGDTKD
                     IFLRQLVQQVSHIDLLLKKDWYLLETRPERPFYVSDNPVVLKNSNDFGPYGNLGLAVR
                     GIQIYLPLSSTLMLAMYCPSIREQMVRQKQHLQHLLARAPHLIPRHIRPFERLEHIRR
                     YTDYLLMPLTPEHVTHYNSLQVEFAEQYVFCGEKDFSLVERMLADSERYRTGPRFTF"
     gene            64292..64546
                     /locus_tag="JNZ89_000265"
     CDS             64292..64546
                     /locus_tag="JNZ89_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934248.1"
                     /translation="MDEERVFSLSYEQLTRIAEKNIRECGLDNQSARCISELKASALL
                     WLWYELAIHGAPQNNHAQARERIDTDYQRLKKLIWSEGDS"
     gene            64546..65136
                     /locus_tag="JNZ89_000266"
     CDS             64546..65136
                     /locus_tag="JNZ89_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001542561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934249.1"
                     /translation="MTQSRRPSPLQRRVLIVLAALDEKRPGPVLTRDIERVLERSGEA
                     PVYGPNLRASCRRLEDAGWLRTLRAPNLQLAVELTDAGRAVAQPLLLAEQDRLRAEQR
                     AAEVVVLPLVPAAGLPADGTSATDLAVELNGITYQACRGDFVVRLDGSTCLQLWNKEG
                     RVVCLEGDPLEVAQWLQACHDAGIEVRVQINESSVP"
     gene            complement(65154..65501)
                     /locus_tag="JNZ89_000267"
     CDS             complement(65154..65501)
                     /locus_tag="JNZ89_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934250.1"
                     /translation="MTFEQKKARAIALMDSKKMWRSNYAPPLLRILWRLGIRLPPLPF
                     MPFWQVAVLTGGLWGTSWGCAMWFIYWGPSGMVAGEAIIISITGGFLFGLLTASFHWW
                     RRKVNRLPPWDDV"
     gene            65620..65967
                     /locus_tag="JNZ89_000268"
     CDS             65620..65967
                     /locus_tag="JNZ89_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000762570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin 1B immunity protein"
                     /protein_id="HAY8934251.1"
                     /translation="MKLDISVKYLLKSLIPILIILTVFYLGWKDNQENARMFYAFIGC
                     IISAITFPFSMRIIQKMVIRFTGKEFWQKDFFTNPVGGSLTAIFELFCFVISVPVVAI
                     YLIFILCKALSGK"
     gene            complement(65985..67865)
                     /locus_tag="JNZ89_000269"
     CDS             complement(65985..67865)
                     /locus_tag="JNZ89_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001604435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin 1B"
                     /protein_id="HAY8934252.1"
                     /translation="MSDPVRITNPGAESLGYDSDGHEIMAVDIYVNPPRVDVFHGTPP
                     AWSSFGNKTIWGGNEWVDDSPTRSDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRL
                     SAAIAAREKDENTLKTLRAGNADAADITRQEFRLLQAELREYGFRTEIAGYDALRLHT
                     ESRMLFADADSLRISPREARSLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRL
                     SELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLKTARNALTRAEQ
                     QLTQQKNTPDGKTIVSPEKFPGRSSTNHSIVVSGDPRFAGTIKITTSAVIDNRANLNY
                     LLTHSGLDYKRNILNDRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAES
                     AINSARNNVSARTNEQKHANDALNALLKEKENIRSQLADINQKIAEEKRKRDEINMVK
                     DAIKLTSDFYRTIYDEFGKQASELAKELASVSQGKQIKSVDDALNAFDKFRNNLNKKY
                     NIQDRMAISKALEAINQVHMAENFKLFSKAFGFTGKVIDRYDVAVELQKAVKTDNWRP
                     FFVKLESLAAGRAASAVTAWAFSVMLGTPVGILGFAIIMAAVSALVNDKFIEQVNKLI
                     GI"
     gene            complement(68144..69490)
                     /locus_tag="JNZ89_000270"
     CDS             complement(68144..69490)
                     /locus_tag="JNZ89_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001632353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934253.1"
                     /translation="MPMILVKKNPRGKVIRELSSEEETAVKTVCGLKRPATMAQHNLA
                     NDLLREMREYDAWLQCDCIPGDSPAMNFAALKNNTGTLYLSSFNHEHAPECPMYRQLS
                     GNEEETSFGASRHPVSTRINYRNFLPPDDSNSVIRLQARSAYHNGERSSVRKKRPRLG
                     RLLLSLIEDAGLNKLDSLANPRIRTNYRECLDAIRQVTLQQEYIRGRALSEIIHFRPG
                     MSERSQERLMETLENSERHWPARRKHMFFQIFMAQHICRDAVEIHWANGNIQVIRPVR
                     GISINGEAQGGIRPPYWVILAFCRSADGRIICSEGYAHALYQLTCPVPVDSKLERNTL
                     TALLNVASWLKRKPGTPELSLERPLFDTEVYVNGEKKYVLPDFIVTARAPDGKTARVV
                     IETMGYEDSDYCARKSRQHTGMKQIGVLHTDPPKWLDNDHPPFKKHMYGVFMHLRY"
     gene            69844..70446
                     /locus_tag="JNZ89_000271"
     CDS             69844..70446
                     /locus_tag="JNZ89_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proQ/FINO family protein"
                     /protein_id="HAY8934254.1"
                     /translation="MGKNQEERKTPVIVVKKRRTFSPPSLSEKTDIIAPVFTEQTAES
                     APAGINSSAVETHIPEAPARKKKKKRHRFPRPSHWTREYTHECVEKIKALFPHLRAEG
                     GGFIPLKIGISNDISAFLAEHPETELTMDEWLCAVSCITSRRVYLQRTAVAGVPRYGL
                     DGHPKGQVSDSEAQSAGRRLATLEQKWLRTQAQQENISGQ"
     gene            70502..70996
                     /locus_tag="JNZ89_000272"
     CDS             70502..70996
                     /locus_tag="JNZ89_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001582574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934255.1"
                     /translation="MCDSEAEKILFILNKHERAYRRLIPVYIFLAIVLWILPILLIVY
                     LYFCIVDNEFLRIGFCIAWTAYYFLSLFKYFVKYFFPLDREDLLNLMDLAKDSPDAKQ
                     ELLERLLSGKRMTGRDEMDIKRILKTKEALDNIRNFIDKQQLTNSDTPKKSTVPNEDK
                     KGIR"
     gene            complement(71739..72122)
                     /locus_tag="JNZ89_000273"
     CDS             complement(71739..72122)
                     /locus_tag="JNZ89_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934256.1"
                     /translation="MANYSNDRWEAPQRASRLAASVKRYKTSEMLRFIFATIAYDPDP
                     DLTPLTVRRLCKALFGRTGSQWLVVEVFGEKGRQHRSADSNPEMVEKMAARYRHAAEL
                     HWSATLAEIERVKRLYQTKIKKSKK"
BASE COUNT        18418 a        18953 c        17788 g        16969 t
ORIGIN      
        1 tgattgttgg cattattttt tgcctctttt gaggttagca tgccgtctcc acgcatccgt
       61 aaaatgtccc tgtcacgcgc actggataag tacctgaaaa cagtttctgt tcacaagaaa
      121 gggcatcaac aggagtttta ccggagcaat gttatcaagc gatatcccat tgcccttcgg
      181 aatatggacg aaataacaac cgttgatatt gctacataca gagacgttcg tttagcagaa
      241 atcaaccccc gaacgggtaa acccattaca ggtaatactg tacgtcttga actcgccctt
      301 ctgtcatctc tgttcaatat tgctcgtgtt gaatggggaa cctgtcgtac taacccggtt
      361 gaactggttc gcaagccgaa agtatcctcc ggacgagatc gccggctaac gtcttcagaa
      421 gaacgtcgcc tttctcgcta tttccgcgaa aaaaatctga tgttgtatgt cattttccat
      481 cttgcccttg agacagccat gcggcagggc gaaatactgg ccttacgttg ggagcacatt
      541 gatttgcgcc acggtgtggc tcatttacct gaaaccaaaa acggtcactc acgggatgtt
      601 cctctgtcca gacgtgcccg taactttctt cagatgatgc ccgttaatct ccacggcaat
      661 gtttttgatt acaccgcatc cggctttaaa aatgcctgga gaatagccac acaacgactt
      721 cgcatcgagg acctgcattt tcacgatcta cggcatgaag caataagccg cttcttcgaa
      781 ctgggtagcc tgaatgtaat ggagattgct gcaatatcag gacatcgttc catgaatatg
      841 ctgaaacggt atactcatct tcgtgcatgg caactggtca gtaaacttga tgcccgccgg
      901 cggcagacac aaaaagtggc agcatggttt gtgccgtatc ctgcccatat cacgaccatc
      961 aatgaagaaa atgggcagaa agcgcatcgt attgagatcg gtgattttga taaccttcac
     1021 gtcactgcca caacgaaaga ggaagcagtt caccgcgcca gtgaggtttt gttgcgtaca
     1081 ctggccattg cagcacagaa aggcgaacgt gtcccatctc ccggagcgtt acctgttaac
     1141 gaccctgact acattatgat ttgccctctg aacccgggca gcaccccgct gtaaacatca
     1201 ttcaaaacac atacagaaag gcgagttgca acaactcgcc aaacacattc gatctgcatg
     1261 atcgaaatta ttcgtttcac cagaaaaaac accgaagata caataaccac atgagctgaa
     1321 aagacttttt cagtcggagg aacaatgaga ctgaatacga ccggtattgc ggcccgaatg
     1381 atgctctcgc tggacaaaaa agcaatcggc gaaaaactca tcaacggtcg tcagataaac
     1441 ccgacacctc tgcaggtccg ttacccccaa ggggtaagag aagttctggg gataatgagc
     1501 gaacaattag ccatatccac cgctgattta acccgaatcc tgcttgagga tgctcttcat
     1561 aatatgttta tgcctgcgga taacaccgca gggaacataa taagcagaat tgaatacatc
     1621 atgctgtcgc atgatataaa tgcgccatta ctggcaacat tgctgtcgcc atggaatatc
     1681 cgctccacgg ttatacagga cccggccaga cttgcagact atctttcagc tgacgctctc
     1741 gaacatcttg ctgaatgttt taatctcaat ccggactggc tgaatggcca tgaaaactat
     1801 ccgatagcgt tgtccggtga atggccagat actgctgata atttcagaat gcttattaat
     1861 gatagcagca acactgaagt tattttctgg catagtttcc ccttcgcagg aaacacgaaa
     1921 agagaatatt acggggtaat attgagacag aaaaaagaaa taaatggttc tgtaatatat
     1981 ccggcactat cattatcacc aacaattctg aacgatgaaa aaagaaaatg gttaactgaa
     2041 tatacaacca ggcagaatac aacaatgtct ttgcgacgcg tcacgttgag acctggcctt
     2101 gccgggaacc ttattacagg gcaaatacta cctgttagct tatttaatac gtctttatta
     2161 ccctggtaaa taccagatag taccaaagta aaaaattacg gcacatccgt gtcatagcgt
     2221 tgttttgtct aaattctgat aaacaggaaa ttaaatgatg aagaaaaatc atattacccg
     2281 caccatcatt gcatctgctg tattattttc ctttaacgct gcagcagcga cgtcatattt
     2341 tgaagcacgt aacgatgcaa tggggggcac cggggtagca tcttcccatt atggtgtggc
     2401 acctctggca aacccggctt tactgacaaa gcacaacagc aatgatgatt tcagccttct
     2461 tctgccgtct gttggggcac aagttgctga tcctgatgat gtatcaaata aagctgatga
     2521 tgttaaagat gactgggatt tgtttgatag tgctgttgat aaccagcatg gcgtacaaca
     2581 ggcagcagca aatcttaaac atcgtctgca ggaattccgc aatatcaatg cagatgctca
     2641 ggtaggtgta tcagctgtag cagccatggc aaatgacact ctgccgtttg cccttatggt
     2701 caagtcttac ggaactgtca gcgtaaacgg aaaagtaaac gatgcagacc tggattatct
     2761 ggacaaagtt gccaatggaa caattaccga cgtcgataag aatgccctga cctcacgcgc
     2821 attcgggcgt gcagctgtaa ttactgacgt cggaatttca tttgccaaag aactggaaac
     2881 ggccggacaa aaatggtctc ttggcgtcac accaaaatat cagcgtgtgg acctgtttaa
     2941 ctacaacgta acggttcgtg attacgacaa agacgatttt gacggtgaca agtaccacaa
     3001 cacgaaaaac ggattcaacg ccgatattgg tgcttataca gacctgaatg acaactggac
     3061 tgtcggtctt gttgcccaga acatcattcc acgcagtatt gatactaaag tcgtcaatgg
     3121 ctttaaagaa accttcaaag ttcgtccaca ggcaaccgcc ggtgtatcct ggcataatga
     3181 cctgtttacc actgctcttg acgttgatct gactcctgcc agtggcttca cttctgacag
     3241 caaacgtcag tttgcaagtg ttggtgctga atttaacgca tggaaatggg cgcaattgcg
     3301 tgccggttat cgtcagaaca tggcatcaaa ctccggaagc gccttcaccg ctggcgttgg
     3361 tatctctcca tttgacgtcg tacatatcga tgtttccggc ctggtaggaa ctgaccacga
     3421 ttacggtgca atggcacaac ttcagttcac tttctgatta ctgtccccgc ccccggcact
     3481 aaacccgggg gtatttttat attcagttta aataacatga tgaaaccacg ttcttcttat
     3541 tcaaaaacag cattcattct tttattttct gttttcctgg tagcggcagt gacaaaagca
     3601 aaaagctcgc ttcccgatat caccctggaa caggcaaaag aaattaatgc tgataacacc
     3661 gttattttcc ttttccgcca tggagaacat tgcgaccgtt cagatatgcc atgctattcg
     3721 gataaaagcg gaatcactat taccggtaca gagaaagcac agcaggaagg tattaagttc
     3781 gcaacaatct tcagtgaata tgatatttac tccagcaatg cggtaagaac catacaaact
     3841 gcaaaattct tctccggtaa agaacccgtc gttatggaca gtttatcaga ctgcaataat
     3901 gatctttata agacgcttga atcaatcgca agagaatctc ataaaaggaa catagtaata
     3961 atgacacata atcattgttt atcatttctg gccagagata ggctcggcaa gaaattcaaa
     4021 ccggcgtacc ttgatgccct gatcatgcat tacgatggta cccggctcat acttgacgga
     4081 aaatacaaca aagaggcata gaggatattt gaatttacat aaattctgat atactcagta
     4141 agatacaaga gtgtacgggc acatgtgcct gtctgaattg caggttatcc ggacgagggc
     4201 cgggaactgt ttcagggaca agcgccggta cgttcgattc ataaatcgtc gagtcatcca
     4261 tcatggatcg attcggcgcg gagcgttaaa gattacgctc atattcgttt tatgtctgac
     4321 gacacatcaa ccagccagta tcaggaataa tcaccttcag taaactatga ggctatttac
     4381 ctggccacac tggcatttat ttccggtaac gcaagtatag ccggaaacaa acatcatcct
     4441 gtctgtaccg gagcaccggt atatcccatt ctgatttaac tgctcaggaa ttattatgaa
     4501 ccgtattata cctgcggggt gtcttgccgc cctttttctg gctggctgca actccccttc
     4561 tcagcatact cctgttccgc gtaactacgg tgctgcctct gatgtggcgg ttacccggca
     4621 cactcagtac acattatggg acaaaggtgt gttttccggc caacttccgg tttcaacggg
     4681 gtctcatctt ctgacagcta acagcgatcg cctttccttt gactgggaag gtgatgcaat
     4741 tgaattactg aacgaactgg ccagagtcag ggggatgcag tttaactaca atggtgtccg
     4801 cctgccgtta ccagtcaacc ttcacgtccg ggatatgacg ttttccaata cgttgagact
     4861 tattgaagcc cagacagcct ggagagcaac aatccatcaa tatccgggct tgttacaggt
     4921 cagcttcatg cagccggaga accggaaaaa atgaaagcac tcacctctct cattttgcca
     4981 gtaatactgc ttactggttg ttcttcttcc cctaccatct cgccaggtgg tgtcaatacg
     5041 ccaccacctg acattaatgc atggcttaaa ccacgaagtg aaaagccgga tagtctgtca
     5101 gaaacacgct ggaaaatgct gaccgacgca ggtaaaacgc ttggatttcg tggtggcaag
     5161 gctcagcgtt catgggagct gattcaggca ctcaacgccc gggaaagcac acttaatgcc
     5221 ttatacgatt tccggccact gattagcccg gaaggctggc taccaccggt tattgatgaa
     5281 gcacaggacg tagctcatat cacgccagat caaatccgga cctcttcccg ggtctggacc
     5341 atcattcgcc ctgaacgctt tgtcagcaat ccaccgggct ggcgtgactg gcttctccgg
     5401 gggctttcaa caacagccac tccgggtaca gaaggcagcg tcgttccaga agacagcgtg
     5461 caacgaaaag tgtgggaaac cgcattacgg cagggatggc aggaaggaag acaaaacgcc
     5521 gacctgacgc ttgaagccaa ccagaaaacc ctcacccgtg attaccgggg catgatgctg
     5581 tactcacttc tctggcgtca gggcatgatc acccgtccgg atgtttctga tcaaatgcaa
     5641 accgttacag gtgacgggaa aaaactggtc actggagatc gtgttcgtcg ccttaaaaat
     5701 catgcggaat tcaatcttca gaaatctcac tggcgtccgc ttataggcac tgaaggaggc
     5761 tcccgatgaa tattcctgat gagtttggtc tttttccgtt tcagcgtttc acggcagatg
     5821 aactacggca tttctttgtc tggtgtgccg cacataaagt cagtgatgtg gatctgaccg
     5881 gcgggtcacc tgtatctgtc agtcgctttg gccgacgggt gcgttgttcc agtgcaacgt
     5941 taccaaccac actcatgtcc tccctgattg atgaactgtt cggtcgggaa gtcattcccc
     6001 gcgttctggc aggcaatccg gttgacagga cgatacagat taacggggat gcatccggtc
     6061 gctatggtct taaacgcgga gaacgcatcc ggttacgctc tcacctcatt cagggcacat
     6121 ctggtgcgga ggagaaagca atatcaataa ccatgcgtgt catcccgaca gaaataccgg
     6181 acatcctctc catgaacatt gaaccagacc tgcttgaagc aatggtctgc aaaagcggtc
     6241 tgggatttgt atgtggtgaa accgggtcag ggaaatcaac gctgtgttca gcactgtacc
     6301 gttacattat ggacaatttc cccgacgcca aaatcgtgac atatgaagac ccggtggaat
     6361 atatcctggg aaatgaaaac gatctgctcc caccgcatca ggcagaaatc gggcgtgatg
     6421 tggtcagttt tgctgccgga ctgcgttctg ctgtacgacg taatcccgaa attatcggtg
     6481 ttggtgagat cagggataac gaaaccgccg acgcagcggt acaggcaggc aacaccgggc
     6541 attactgcct gagcaccatg catacgaaat ctcctggtga aacgctggca cgtcttcttg
     6601 ggctgtttcc ccctgtcatc agggattcga tggcctgggc tgtcctgtca ctgttgcagt
     6661 tcattctggt tcaggttctg gtcagaacaa atgacggtgg tcgtaaagcc gtccgggaat
     6721 atatcgtcat taacgatgag cttcgcgaca atctttccgg aatgccgcat gcagagtggg
     6781 ggcatcacat tgatgccata atccggcagg agaagcgccg tatccgggac cagattctgg
     6841 aaatgtatat ccggaatgaa gttgaccgaa gagaagcgat tctttttatc ccgccagggg
     6901 agttacggtc atgaaaagag aaggtttctg gcgatatgca acaccgccag tcaacatcca
     6961 gggcgtacct ctgccgttca ccatgattta tctgtttata tgcccctttc cctccaaaac
     7021 aaccttctgg atttgcaccg gcatcatttt atttttcgtt attctcgacc gttcaggctg
     7081 gactgtcagg acgatctgta ctcgcatttt cagcattctg agaggggcca tcgcctccgg
     7141 tcgtccatgg tggtatcgcc accatacgga atcaccacga gactggactg gcctcgatta
     7201 aattctggag tctttatgtc aggtaaaaaa actatcgtta ctctgctccg ggtatcgcta
     7261 ctggcatgcc cgttactgtt cacgacacca tcgtttgcaa tgatcgacac gccatccgtg
     7321 aaggtcggct tttctcctga aggaagcgca tccgctctgg tgcttgacac aatcaacagt
     7381 gcggaaagct ccatcaggat gatggcatat tccttcaccg acccggatgt aatgcatgcg
     7441 ctggcaaaag cgaaaaaacg cggagtggac gtccgtattg ttgttgatga caaggggaat
     7501 acgaaccggg caagtcagga agcgatgaaa tatatcaacc tgctggacat tcctctccgg
     7561 actgtagatg ccttccccat ccatcacgac aaagtcatca ttgttgacgg aaacacggtt
     7621 gaaactggct cctataactt ctctcgtgct gctgcacgca agaattcaga gaatgtcgtt
     7681 gtgctcaaga atatgccgga tgtagccgca caatatcttg aacactggca ggatcgctgg
     7741 aataagggta cagactggag accctgacaa acatttctcc cccgattttc tatcccccca
     7801 gccacccccg gcttccggcg gtggtttttt tccgtctttt ttcaggagaa gcactcatgc
     7861 cgtctgtatc ccgctaccgc acctggcttg ccgtgcctgc agatgaaata gaagatctca
     7921 aaaaagcaca tcccccgatg aacgggcaca cgcccgtcat ctgggacaag gagcacaaac
     7981 tctggttcgc ccgcccgggg gcggacctgt ccaggctgga ccgctggctg ccccggccac
     8041 aggacgtctc catgaacggc agtgatccgg tcaccgagtt tgcccaggtt ctggagaatg
     8101 ccggactggt tctgaaagaa ctgccggtca tggacgggaa aatccaccgt gtcccgaccg
     8161 ccgatgacaa aaaaggacaa aaaagtggcg catatcgcgg attcctggac ggcagacctg
     8221 ccggctggta cagggattat cgcagcgcgg ataattcgcc gatcacctgg accttctccg
     8281 gcggagaaca gacagatccc cgcgcaagac tccacctgaa agcgcattca atgcaacgca
     8341 gggaggacgc ggagcgggaa ctgaaagcac agtacaaccg acaggccgcg tatgcccgcc
     8401 gctatatcaa caaatggccg caggccacag cacatgaata cctgacccgg aaaggcattc
     8461 aggctgcacc gggggtgcgg gtaaacaaca aaaatgaact ggttattccc ttcagtaacc
     8521 gtaacggcgc gatacgctct taccagcgta ttccggtcac cggggggaaa gatgcccgca
     8581 tcctgataga ttcggagaaa accggtaact ggtttgcgct gggcacaccg cgcaacggtc
     8641 agccggtact gtttgccgag ggctatgcca ctgcggcctc cctgcacgaa gccacgggcc
     8701 ttccggtact gatgacggtg gatggaggca acatgattgc cgttgccgaa aatgcccggc
     8761 aaaagtggac gcaaagcccc tttatcttct gtgccgacaa cgatcatgca atccgggtta
     8821 acaaaggtat cgtcagtgca acaaaagccg cagaactgac aggaggatcg gtcatctttc
     8881 ctgcgttcac cgatgccgaa aaagcgcagg ggctgaccga tttcaatgac ctggacgcaa
     8941 gccggggacg ggccgctttt cagcatgtca tcaacgccca gttagaacac atcggggttt
     9001 ccacccccaa cagtaacacc ccggaaatgc gcgaggcact ggtgataggc aacctcgttt
     9061 ttacaccggt ccacactgag gaaaaaacca tgactccgac agaatatcct gaaacatcac
     9121 ccgatacagg gcacagccat gaccagggac cttctctgcc gtccgccacg cagcaggaac
     9181 aaccagctgc ttccagcagt aacattgctg atgaaacaca gtcatttacc agtcacgcca
     9241 ctgaaaataa cggcaaagat gagcggcacg ctgataacgt tcaggcgcaa acggaaagct
     9301 ctgtagttca ggactcccct gcagaatcac cggcgtcccc ggaaagtaca acggcgtctg
     9361 cccctgatga acccgctcat ccggcggaac ctccggaaaa agttgtctcg gtggccacag
     9421 ataaagactg gcgtgaattt gaagccgaac tgtcacaacc ggaaaaaaac gagtcacaac
     9481 aggaatccgg cacttcacct gaaataccgg cccctgctgc cacccccgca tcccctgaag
     9541 acagtccctc atctgaaacc atgaatgaat cagccgagcc atcaccttcc cctgatgcag
     9601 tcaaagagga aatgaccgtg atgacggagc ctgatgacaa acaaagcacc ggaatatccc
     9661 cggatactcc ccgggaagag gcggtcaacc atgtaactga agacattccc cttcagccag
     9721 agccgttcct tcctgagtca gatggccccg aagaatacga aaactacagc gcatatcagg
     9781 agctgatgaa caatgaaaat cctgagcatc tgcaggaaaa cagtgatatg ccgtcgcaac
     9841 cggacacagg ccacgttcag gctgatgagt cagaacttca ggccacaaca gatacagtag
     9901 aaccggctgt ccgggatgac cccactccac agcaacctgt tcagagcaca tcatcttctg
     9961 ataatacttc atcgtttctc gacaaagcgc gtggcttttt tacgcgtaaa aaaacggatt
    10021 cacaggcgca tgagaacagt gatcccaccc cctcaccgga aaccacgacg accacaccgg
    10081 cacctgacag tattgtctac gccccggaac gccctgatgt accgatatcg ctcaatctgg
    10141 acgaaatcat taaatcgctg gaaggtgaag aacgagcaga cagaaccgtc ctgtacaaac
    10201 tggatggcaa acctgccttc attgaccggg taaaccggct ggaaatggtc aacggtgcca
    10261 gcaatgacga tcgcagtgtt ctggctgcac ttgctgtggc cactgatttt tatggtggtg
    10321 tcattgagct gacgggcagt gatgccttta agcaaaaagc gatgcagttg atcatcgagc
    10381 acaacatcaa agtgcgcatg aaattcccgg atcagcgagc ggcgctcgaa aaattacgca
    10441 aggaaatggc tgtcggtaag gatactgttg tcacccataa gccaacaccg gaacttaacc
    10501 ggaatacccc tgaacaacca gcagtcccag accctgttaa ggaaaaagaa gccacacaat
    10561 ccccggcgtc cccagtagcc cctgaagcat caaccgtcag caccgtccct gcatcatcac
    10621 cggctgaacc tggcaaaacg gcagatgcgg cacaaggtga agaaccacca ggaaaacttc
    10681 gcccgggaga gagcgtgact gccgtactgc acaattttgg tcgtgctgaa tatgcacccg
    10741 gcaaaggaga gagtttcttt gttgagctta aaaaccgcag tggcagcaaa ctctactggg
    10801 gggaacaact ggaaagtctg gtcaaaaacc accagaaagg tgacgtggtg acactgacac
    10861 ttcagaaccg cgaacaattc atcctcccgg gagagcaaaa agcacgtttc cggaataagt
    10921 ggtccatgga gtcagttacc aacgggatct cggtatcaca tgataatccg gataaaggtc
    10981 agcgtattca ggcgattccg gtcgaaacct ttatgaaagt ggctgcgcaa atcagccagg
    11041 ggtggcccga agagatgaaa gcgttacgta tgccagaaaa cgtcggctca catctgttta
    11101 tcggtgaaga ccgacatccg gtctccgcgc cacagaacgc aaatcaggta acagaaataa
    11161 ccagcgcagc ccctgacaag ctgacacctg ttctgggatc agtggataag gatacgcgtg
    11221 aactcaacct gctacttgtc cagagtgccg atgaacatct gcagggtgtg gtccggctga
    11281 acggcacatt gtatccggca ctggccaccc catcagccga caacagtcag ctggttatca
    11341 atgcgctgac cgacaaaggt ttacgctttg caggttatgg tgaagcggta aaccacgatg
    11401 ctgacagcac gaatcgccct gcaccggagc ttatgcagtt tcatctgaaa acccgggaag
    11461 aaccgctttt tgctgctgtc tacacgccgg aaaaacaacc tgatgcgttg taccggaacc
    11521 tgggcttcga gcagtcatgg cagcagtggt ccaacagcca aaagccggag gacaggcagg
    11581 aaaaaactct gcatcaggat ctctcccaca gccccggccg atgagccggt aaggaagcca
    11641 tatgaacatg cataagtctc tggttgccgt gctcggcctt atcctgattt catccacggc
    11701 aagtgctgca acctgtcgtg cgggtagcgc ggcacaggcc ggtagtaata caggatatga
    11761 gcgagcacgt gcagctgcgg atgcatggtc acaacgtgaa aacgatgttt cctcatccct
    11821 gcagtcctgt ctgtcacgaa tcaaaaaaat cagcataaac ctcccccagt tccccagcct
    11881 tgacgacatt ctgtcgcagc tggaaaacca ggtctgcgac gcggtcgtgg acaaggtgaa
    11941 tgaaaagctg ccggggaata ttgatccctg gaaggactac aacctatgac cgaaaatacc
    12001 gagccatcct cgccatcaca tccggcacct gacccggaaa tactgaagag cacaatcagg
    12061 gctatgaagc agtcagaaca gcgggcaaat aatgtccctg cgctgataaa agcgctttta
    12121 tgtacgggca catgtcttct tatcagtatt actggtaacg ccattcagta ctggcactca
    12181 acgaatgtgg agcgcgaata tttcgctaca gacaatggtc gtctggtcag gctggcacca
    12241 acaagtcagc cagcatggag tcagaatgat gcaatggcct ttggcagcca ggcactggcg
    12301 accgcattca acctggattt tgtgcactat cgttcacaga tctcctccct gtctccgcgt
    12361 ttttctgacg aaggttttgt cggatatgtg aatgcattac aggcatctaa cattctggag
    12421 acgatcaaga aagagaagat gaatctgacc gccacgacag gtgctggcgt tctggtacga
    12481 cagggacaaa tgtccgacgg cgtatggttc tggacattcc agtatcctgt ccgtatgcgt
    12541 ctggtcggcc agacaaccag caagccagaa cagtcttttg ttttcgaaat caccatccag
    12601 cgtgttgacc ccagactgaa accatccggt atggaaatcc ggcagatgat ctcccgtaac
    12661 gccggaccga actcctgaga taagtaatat gcaatcacgt tatttactga gcacactgct
    12721 cctggtgtgc agcgccgcca cgtctgcaga taacgcagga tggcagaacg cacgcacacc
    12781 acaaacgaca aattctgcca gcgatcacgt tcagaacgcc tcccaaaaca ccggaggtgt
    12841 tccggcaaca ctggtaaaag gtgagctgcc tgcccccggg caggccagcc cgctggtaca
    12901 ggatgcggca aggcttgatt ctgagctctc cgccgatgag attcgctcac tacgcagtct
    12961 catggcggat aacgagcggg ccatcaatgc gcccatcacc agtgttgtac cccgtatcag
    13021 ctctctgaca gttaatctgt cccccggtgc cagccttcct cttgttcgca cagccatgaa
    13081 caacctgagc gtggtgacat ttaccgatat caacggttca ccatggccac aatccgatcc
    13141 tccttataac gcggcaccaa aactctttga tgtgcagtac aacgagaaca tggtgacaat
    13201 cacaccattg cggccatggg catccggaaa tatttctgtc tacctgaaag gtctgtcggt
    13261 accggtcatc ctgaacgtaa ccagtggcga aacagatacg ccgtcatcca gtcaggaaat
    13321 ggacagtcgt ctggatctgc gaataccacg gcagggacca accagcccgg ttgtctccat
    13381 cccgacggat aagatcgccc tgcatgatgc aacattacag gcatttctgg atggtattcc
    13441 tccccgggac ccttcagtta agaggctgaa attcacaggt aatgtcccgg atacaacgat
    13501 ctggcaacac ggcgatgacc ttctggttcg ttcccgggcg atgttgcgcg atgaatttga
    13561 acagaccttg tcctctgccg acggaactca tctctggaaa cttcccgtca ccccactact
    13621 gactttctct gtgaatggcc agtccattca cgtgacacca gaactggagt aatcatgagt
    13681 gctgaacagg atgccggtaa atccggaaag aaactggctg ccctgcttgg actgggcagc
    13741 atcatcttat ttggcggcgg ctatatcgcg ttttccaaac tatcagggag taacagcgat
    13801 atgcagtcag ccgtgaacat taacagtgca gcaagcggcg gaacgcgcag cgttaccgaa
    13861 acgcctcact atcgtgaact gttaagagcg gataatgaac gaggggccgc agctgcagcc
    13921 cgcaataatc agacgttcat tgccagtctt ccacaggggc ttgatattcc ggacactcag
    13981 gaaaagcaac aacagcctgc agcaaaaccg gaaaactatg ctcatcgcca ggcttccggc
    14041 acaccacagg aggatcgagc agccagtgaa aaacgtatgg agcggctgca aaagctgatt
    14101 gtaagaataa aagatcagca tcctgccggt agtacaccaa ccatagcaac gactatgtgg
    14161 aataaatctc cggcagaaac aacagggcag aatggtacgc agcaattcgc attaaagaat
    14221 gccagcctgt ccacgcctgt agcagaaaaa gggatacaac tgatacctgc tctgacccgt
    14281 ataccggcat atattgatac tgcagtggat tctgataacc cgtcatccaa ggttatcgca
    14341 accattcccg ctggcccctg ggcaggggca acgctgttca gtccgggagt caaactggtg
    14401 ggtaacggcg tggagatcca tttcgaccgg atgagctgga acggcatgga ccttaaggtc
    14461 aatgcatatg ctcaacggga agacaacctg atgtcatccg tggccagcaa tgtgaataca
    14521 cgctggttta aacatatcat tctgccgtca gtgttaggag gtgtgggcag tattggcaca
    14581 ctttataaag atgccaacac gcaggttatt cagggtaact atggcacggt taccggacgc
    14641 gtgggaatgc ccagtggtga agctgttgcg ggcgttattg ccggtggtat ggcggaaaga
    14701 ggaagtcaga tattaacccg ccaggcagaa agtgagccct ataaacaggt agaagtgtat
    14761 cagcatgaag tcgtatcaat tctgtttgtt gacccggtaa tgacaaacga cgccaggtca
    14821 tcttcccttt ccagtggcat ttccccttca gttaatcgta catcacaggc ggaacaacgc
    14881 tcgcaggcac gaatgcagac agccatggag caaagaaaag ctgtgatgca acgtcggtat
    14941 gatgaacaac cggagacacc ataatgaaac ctgaaacaga aatagatgaa accggcagct
    15001 tcggtgaacc cgaagagaaa cccgccccct tctggaaacg ttccgtctgg gggatatctg
    15061 tagcaacatg ggggctatgt gcagtcgtgt tgctcgcagc catatggtat ctgttcctga
    15121 gagcgccatc ggaaacaggc atgcctccgt ttaatgatgc ggatgctggc gtacagacct
    15181 ggcaaaccac acaagaatca tcaccttccg ttcagtccac tgagactatg actgtccgga
    15241 caggagaaga tatgagccag cttgcccggg atgtaaaaac agagctggat aaccgcgatg
    15301 aaaaaattca ggcaacactg aatatgcttc acgacagcat taacaagctg ggcgaagcta
    15361 taaaaaagga tgaagaatac gcacaggaaa cacgccgtca gctggatgat atccggagcc
    15421 gcctgaacgg aataatgaca cagaaaagcg tcactgaatc ctcttccaca ccgcatccag
    15481 caaagaaaaa aacgtcgtct gtacttaacg gaatgaaaat catgtcgatg gaaactggta
    15541 tggcctggat tcgctggcag ggtagtacct gggctgtcag agaaggtcag acgctgggca
    15601 atgtggtgat ccagcggatt gatccgacta cccggaccat catcaccagt gcagggacgt
    15661 tacgctgatg aacatggatg ccctgaccgc cattgagaac tttgccagca gtattttcag
    15721 tgccggaatg gatttcctgt ttacctgggg agaattcatc ggggtgatca gcatgattac
    15781 cctgtttgcc cgcgcccgtt cagccggtcc ggtaaaaatg tctcccggaa aatttattgc
    15841 ggggatgtta accagctgca tgctcgtatc actcccggca atgattaacg ccggaggcgt
    15901 acaaatggga ttcagggctg actcatttgg cccgattgca tatgtacaac ctcagacgtt
    15961 tggcgctgct gctggcgcag caaatgcagt tctgtcgctg gccaagctgg ccggtgttgg
    16021 atttgtaatg aacgggatat ccatctggcg caaggccgga ctcgatggac ataccgcact
    16081 gagtgccagt gaatccgtca gtaagggaaa cgtcaaattt attgccggcg tcctgctggt
    16141 ctttatcgat cgtgtcctca atgccctgct ggcaagcatt ggaatcgtct tctgattttt
    16201 ttcaccttca tataaaccac tgatatatcc atttaaggag aaactatgtc acgtattcgt
    16261 gtcgtagcgg cccgtctgta cgccgcattt atccacgcac aactgtttgt aatgtcatgc
    16321 cggagcaaac tgactaagtt cctgctgctc attcccatga tgttgctgcc caaagccgtt
    16381 cttgccgatg gagatcttgc cgatatggtt cgcaatgtcg aacaaggtgc caaaacagca
    16441 cagtcatcat cactgactat tgcgcagttc atcggcgtaa ttctgtttct cgggggcctg
    16501 attggcctga aaaaagttgg gaaacaaggg gggatgggac tggctagttg cattgtatct
    16561 atcgtcattg gggcggtact tgtcgccgga cctgaaatga tgagtcgcag ccagaaacag
    16621 ttggggattt cctcaatttc cattggctaa tcttgtccag ggcactggca tttatccggt
    16681 gcccttcctg ttcggcaata caaggaggca catatgtctg cctggagccc ggagcacata
    16741 acgttacgac gaacagaaaa cggcaatgtg attgcccacg acagtcggga cgatcaggaa
    16801 ttcatttttg cagaatgctg ttccgatgaa atcgcaaaca tcattctgga agccgtgaaa
    16861 cgttacacca gtacggagcc tgctcatgca acacagcatt aaagacttgt ggttgtatcc
    16921 ctttccagaa attgatgtgg ttcatacaca ggagccactg ttaccggaac cggaattaac
    16981 aacgcccggt cgatgtatct gctgccggca aaacgtcagg caccgtttca gactggatga
    17041 ctcatggcca ctcagacagc ttaccgacac aatcagtgac acacgagttc gtcttaataa
    17101 agccacagaa catctggata agttaaaaaa gcgtggtgaa ccagtcgcaa ccggcgaaaa
    17161 ggaaaagtac aacacggcag taaaagccgc tgaacgggcg cttgagcagg cccgtctgtc
    17221 tgccagacgt ctttcactcc gccatgtaca gaaagctgaa atcaccagta cagagtcgtt
    17281 gtcagagaaa gagcaggaac tgtttcatga agacggcccg ccttacagct tatgtgcttt
    17341 ctgccacgcc tggcattcac tgaatggtta tgccgcagca cagggcgtta tggtgtggct
    17401 acccgacctt catccatcca cggtcgtggc ccttaaccgt cgttcattac aggaagtttt
    17461 cagtaatgat aagttccggg tccggcgggg acgggaagcg ctctctgcac tgatgcaaaa
    17521 cagactggcg gttgaggata aattccgcag tttccgcccg gccgatttcg ctgacgtttt
    17581 tcgtcgctat ccaccttctg gtcgttcgcc cctgcgtgaa aaaatgaacg ggattgccct
    17641 gattctgaca ccagattcat tcatcaaaaa agaatacgtt gattgatttt tcttcatgcc
    17701 actccagcgc ggggtggcat taaaaaaatc aaactgcaca aacctccctc ctgtaagtcc
    17761 ggagttccct cacctatgaa cataaaccgt ttcatcttca ctatcgaaga ctgtctgaac
    17821 acgctatccc gtttctctgt cgcaagcagt tttgttgagt attgcgattt acgtactgta
    17881 attggtctgg acagacagga tcgtgaacgt cgcccatggc ttaattcgcc ctatattgca
    17941 gccacaaagc gtggagaata tctctctgtc tttgaagtca gcggtgcttt cagggaaatg
    18001 gatgaagcat ccgaccagac tggcccaggt tcactggaat cgctgatcac cagcatgagt
    18061 gacagcctga atacggcata taaaaacagc ggtcataaaa tcagctgcgt tttcgagcgt
    18121 gaccctgaaa tggggaaaga agaaatcgaa gacatggtcg ccccacaaaa acgctcactg
    18181 gctaatacag gtatccagtt acaggatgtg gtcgatgaga aagtcacaac actgtcccca
    18241 tggctggtcc gggagcgctg ctggctggcg atctggagtg gacccgacct tatcagcaac
    18301 agcgatcgca ccgcccatga tgagcttgtc agaagactgg ctgaacgggt accgaaagca
    18361 cgctttgccc agtccccctg gcagtggacc ttatctgcac tgaaaatccg ccacgaagct
    18421 tttcttgata atgtggaaca ggcactgaga cattcatctg atggcctgat tctccggcta
    18481 ctggatatac acgaggtcgg gcgtgaaata cgtcgtcaga cagaacggta cagcacaccg
    18541 cgtaactggc aaccccacct gcctgaagat gcccagccag cgggatatcg ctggactgac
    18601 gatgaatccg tactacatgc tccttcattg catttgcagt tattcaacac gcaggtgacc
    18661 acacagggca acctggttca ggcgggcgga ctctggcacg gaatggtatc gattacttta
    18721 cctccgcaaa atctgcagac gtttaacgaa ctggtccgtg ccgtcccccg cgcagtcccc
    18781 tggcgcatca gaatggatct gatgcccggc gggatgaagg ctcttaatct gaagaaaacg
    18841 cttctgactt acagcagctt catttctgcc gttcgtccaa tgtatgaatc cgttatgact
    18901 ctggcggcaa cggatgaaaa agaacctgtc tgcataatga ccatcatggc ctccacgtgg
    18961 ggaaaaacac gtgaaatatg cgcacgaaac caggccattc tgaaatcggc cattgaaggc
    19021 tggggcgtat gtggcaccac gacaacattt ggcgatcccc gacgcgcctg ggtgaatacc
    19081 attctcgcgg cgtccggagg ctccggcccg gttcccctgt atcccccgtt gtcacatgcc
    19141 atctcgcttt tcccgcttaa cagggcaggc tctgtctggc gaggcaaagg gaatctgatg
    19201 ttacatacag aagacggttc cgcatttgag gttggtctgg cgtcatccca acaaaataaa
    19261 catacagaac tggcaccagg cgatccggga ctgggtaaat cagttctgat taatacgttg
    19321 tcggaaatac agatatcatc tgctcagaaa aacctgccct tcattgccta tatcgataag
    19381 ggatacagtg ctcagggact ggttcagctt attcgcgaca gtcttcctcc ggaaagaaaa
    19441 gacgaagctg tcggtattat tctgagcaat gatccggaat acacccgtaa cctttttgac
    19501 gtgatgtacg gcgctaaaaa gcctattacg ccggaaaaga atttcatgtc atcggtgctg
    19561 tgtgctctct gtgtcgatac cggtaccggt caaccctgta accccggaga cacccgacaa
    19621 attatcaacc agcttatcga gctggctttt aaagagtacg gtgaaaataa tccgcgactt
    19681 tatcgcgctt caacggaaga actggtggat tcagcactgc aggactcggg actgtatgaa
    19741 aaacatgatg cagcctggtg ggccagatca acctggttcg aagtccggga tatgctccac
    19801 aatgccgggt atatcatggc ggctcagcgg gctcattatc aggcaatgcc ccagcttccc
    19861 gaagtgtcct cgatgctggg ccataccagt ctcagggatg ttttcggtac tgttcagcgt
    19921 gatggttcaa acgagcttct gctggactac atccgccgcg ccctggagca gggacataac
    19981 gactacccca tgatatccgg gtatacccgg tttatgatca acccggaaac ccgggtcatc
    20041 gctgtcgatc tgaataatgt tgccggtgac aaaacgcctg caggcaggct taaaaccggc
    20101 atcatgtacc tgcttgcagg tcagatcgcc ggtggtgact tcaccctgcc acaatacagg
    20161 gatgaagtgt taaagcagct tccacgggaa taccatgaaa tcgctcttaa acgtattaac
    20221 caacttgatc aggaggttaa gacaaaagtt tatgatgaac tgcataacgc ccggggaatt
    20281 gacttcatct gggaaaatct ggatacccag gagcgcgaac aacgcaagtt tgctatccgc
    20341 acggttctga gtacgcagta tctgagggac tacccggaaa gcgttcttaa gtcagcaaat
    20401 actctctggt taatacgcta caaacccgaa gatatccccg tactgaggga taacttcaac
    20461 gtgcctgaat ttatgctgaa acgcttcctg aaaatgccgg aaggcccggc accagatggt
    20521 agtggtgttc ctgttctggg agtattcagg gtaaaaagtg gcacgcttgc gagaatactc
    20581 aaatttaccg tcggtccact ggagctatgg gcgctgaact catcgccaaa agacagtgcc
    20641 ctgcgtaaaa cgctgacaaa taagttaggt tcagttcggg cacgtaagat tctggccgaa
    20701 aacttcccca gaggttctgc aacgtcatta attgagcacc gggcgggcca acataacagt
    20761 gacaatgtta ttgaagatct ggcctcggag ctcatccgaa aacagggata caatctctga
    20821 tgtgtacaat tcatatcacc ccacgctgcc ggagacctgc cagagggcag gtatttctta
    20881 aaaaacttga ggtaaaaggt gacagtttct cattcactct gccgtcacgt ctcttcaggt
    20941 tacatccggc ccccaatccc agagtgatat acgcctcgga tgccagaaca cagggaaagg
    21001 ttacaggcat gcggctgttg ttgccgtcca gcacagatga gctgataaca acggcaatat
    21061 ggcaggtttc tgtcccggat gaagcaccat tcgacgttca gcatgtcatc cagtggatac
    21121 tcccttcacc gctggcttcg ctgatgtccg atgatacctg gttatggcca tccgttcccg
    21181 gaacgccggc actgagtgcc ggtgactggc ctgtcatgga tactgacccg tccaccttac
    21241 ggcgcgtcag acgtcgttct ttcagcatca tcgataaccg gaacaggaaa ggttatatca
    21301 ccaggcgata tcagtgtttt ccactggccc cactacctga agacagaaaa tacgacagcc
    21361 ttcctgacct tgtgctccac cccgagcagg agacaataaa atgcaaagaa aaacattact
    21421 cgcagccctt atagccatcc tgagtggaac ggcatgccag gctcatgcgt attcagtcac
    21481 cgtcgtcgcc agccgccccg ttgaacagca ggtcgtcccc agaatggagg ccatcaaagg
    21541 tgtgctgagt gacatactga gtacccagac agccacgggt accgctatca atcagaactc
    21601 tgaaaagctg gcaagtgtca ttgcccagaa cggacaggcg acacgtcagc agatgatttt
    21661 cagtaatgaa actcagcgcc tcgaggaggc acggaaaagc ttcaccgtgc cagactccat
    21721 ctgcagtgaa tccgcatcag ggattgcaac agaaagcaaa agtgcctcag catccgcagc
    21781 ctcaaaactc agtaaaggtg gcggtgtgag caaccgtaac atccgcgacc gtctggccag
    21841 cgcagcaaac tctcccgtgc gggaagctta tgatggcgcg gccatacacg ccagttactg
    21901 tacagaagca gaatatgcac gttttggagg aaccgccgtt tgtccttctg tgggcgaaat
    21961 accaggtgga gacagtcagg tacgctcgat ttatcacggc gcaggtacag cggacacacc
    22021 tgcggcactg acatgggatc agaagcaaat agatgcagcg acggcttaca tgaaaaacac
    22081 ttcccgcccc tctgccggtc gtgctctggg taaaggagaa gtgaataccc agagtgggcg
    22141 aacctacgtc ggactccaga acgaatacaa cggcatcatt gattctgcgt cgaatcccca
    22201 actgacgttg attgctgaca gcacgcctaa tgaaagcaca cgtaaagcac tggctgaaac
    22261 actgcagtca gactcagcgg ccgcttactt cgaccaggtg gcttcaccag aagcaaaagc
    22321 acggggatat atgagtaccc gtgagtttga agcttttgag gctggccggc gctacgccaa
    22381 cacagcatac ctggtggatt tacaggaaat gcagggggat aacctgctcc gtgaactggt
    22441 aagaatcact gcgcaaatga actggcagct gaacgatctg aaagaacaga tccgccaggg
    22501 taatgttatc tctggccagc aactggctct gactgcccgc cagtattatg aaaaacaact
    22561 cggtagcctt gagaaaacaa tcaatcaggc aaacgcacgt tgaaagctga cgtcagaaca
    22621 ggactgaaaa aatgaataag ttaccggaaa attcagacca gacgaaaaac gtcaaaaaat
    22681 caccatccat aacccgcata gccacccgga ggattattaa catttttgtt ccgctgatgg
    22741 agactcgcct gataacgaat tctgtacagc atatgctaaa gcaacaaaaa agcaggctgg
    22801 aaaaattccg tcaggtaaat aataaaaagg cgcaactctg cctctcgtgg gaagaagctc
    22861 tgctggccag ccatatgtca gtagacgatc tggatcgccg tttccgtcgg cgcagaacag
    22921 catggcggtt atgctgctgg agtctgctgg ccatcgcttt attcctcagc ggtatgctct
    22981 ttgccgcctc ctcattacct ttgatgacac tggtacgcgc catcagcact cttatgttga
    23041 tactgtcagg cgtcgctctt tgtgcttcca gagctctgat agttacatac cgcctctggc
    23101 agttgcatga acgaaaagtc agcgaacccg agcaggggac tttccgtgat tttctgaacg
    23161 accgcaatgg ctggcgcaat gccacattaa ttgccgtaac cagtaaacaa tactgatcac
    23221 gtccagatgc cagtaccact ggcatgtcgc catccccctt aattaaatcc tgtgtggcct
    23281 ttgcccatac gcaattctat tccggagtta ctgtgaaaat tttacttcgc gcactctgtg
    23341 caggccttgc tatatcctca ctgccggcaa tggcttcagt gacctatcag gatattgtgt
    23401 ctgccgccac caatcctgac gatctgtccc gccaggcgct ggtcacgata ttcggtgatg
    23461 tggtcaccaa tccactgtca accagcgacc ccaccctgat cggaagcatg ttctgggtgt
    23521 tcaacaatat cattgccgta cttgctatcg tctggtgtat cttcattagt atccgccatg
    23581 ttgtgcgttc ggggcatcag ggacaggtat tcagcgtcgg gcgcgatatt gtcggcatac
    23641 tgagtttcgt cgcaggtttt ctgatgatcg ttcctaccgg aaatggctgg agtctcgctc
    23701 agctcattat gttatggggc gcatcgataa tgggggttgg gtccgccaat gtgatggtgc
    23761 aagttgccgc tgataatatc gcaaatggtt attcaatgac tgtacagcca gttcaggcat
    23821 ccacacgaac agctgcgcgt ggcatttttg aaatggaact atgtaagtat gcggttaacg
    23881 caggactaaa tgattttaat cagaccgcca aatcctcgac ttcactgatg acagaatcag
    23941 ctaaaaccgc cagtggtaat tacactgtca cggtatccaa tggcagcggt atctgtggta
    24001 cagccagcct gtcagtagaa ggaaacggaa caacagatca gtcgacgatt ggaaaattct
    24061 ttaatccctt cagtaaaaac gagtacagcg gtgttatctc agcacaacgt gcagccatgg
    24121 ataatatgat tagcgacatg gacaacgctg ccagtgagtt tgtgacaaca tttctggaaa
    24181 aaagaaattc tggcaacgga acactgccgg atatcgagac acgaattcag aaagcagccg
    24241 acgaatacga acgtgctgtg caaaaatcgc tacccactga taacggagag caatccagaa
    24301 aagaggctct taaatcttat ctcacaacct acgggtgggt aacgcttggc gcatggtatc
    24361 agacctttgc cactgctaac cagcgtctgg cagagctggc tgacagagct ccagctgtaa
    24421 cttcaatgtc atcactggga gaagttggtg atactgactt attcagtgcg gtcatgagtg
    24481 cctataggac gcaactgcag aattcctcct atacgccacc gctgggcaca gtagtatcat
    24541 ccagtgaaca acgcatggca aatgcacaag atccgaaatc tgccttgtct gaaattatgg
    24601 gcccccttgt tagtctcact aacaggattg caacggaaac aagtggcaca ggcacaacca
    24661 gtgctcaaat taatcctctg ataaaaatga aaaatatcgg agatataaca atggtaagtg
    24721 cagaaggaat ctggactata tatacaacgg ccagagttgt cgttgccggt ggcaaagatt
    24781 caattcttgt aaaattcttc aactcactaa caggtgccgc ttcgatgctt accgcgctgt
    24841 ttgaagcact tgcaccacct gtttattttc ttttgttcct gatgttctgt gctggatttt
    24901 ccttatcaat ttacctgcca ttcattccgt ttattttctg gatgacaggc atcgggaact
    24961 ggatagtcag cgtattaata ggatgtaccg ccgggccgct gtgggctgca acacatctcg
    25021 ggacatcaga agacagagga agtcgggcag cctacggtta tatatactta attgatagta
    25081 tgataaggcc gcccatcatg gtctttggtt ttttctttgc ttctgtagcc atcatcgccg
    25141 taggcacaat actgaatgca ttatttggcg ctgccctggt taacgtacag ttcaattcgc
    25201 tgaccggtat tttcagtctt gctggtttct tgctgatata cgccagaatt tgtacaacca
    25261 ctgtagctgc catatttgcc cttcaggcct acctacctga tcatgttatt aacttcctag
    25321 ggggacgtga tggagccaac acgcttggca gcatggcaaa ttctgttaaa gaaatattta
    25381 ttggaggaag tcgcaatatc cgacatactc ctggaatgaa aacagatcgt cttaaagata
    25441 atacaaaagg aagtgacgac aaggacggaa taaaaggata atatcaatat aaatattgca
    25501 caacctcccc atcggcatta aaataataga tagtacgagg ggaggcatta tatgaaagct
    25561 aaaaaagaaa caacagacag atttccaacc tggtggctat tttattatgt attaagaaaa
    25621 gcttatttct ttcttggaat accttttttt ctgttctgcg cattaggctt taccgaaatg
    25681 ctatgttctg atcgttattt cggaaataag gtcgaagatt atgttgtcac tttcggtagt
    25741 tggttcttat tacttgcgcc aggcatatgg atgtactcac gtgcaaaaac aaggagagaa
    25801 aaaataagaa aagttgtaca aacaataaaa gagtcaggct tctactctcc agagaagggg
    25861 tatgagggat tatctttaac ccagggagct tatttcggca ttgaccttaa aaatggcaca
    25921 atgttgtatg tccgtatcta tccaggcaac attatggatg ttatcggttt tgacattcat
    25981 aatttcactc gtactgtaac agacgacaaa aaactggaaa ttcatacgaa atacatcaat
    26041 ctgccaatgg ttcctgttcc atcatggtgt gctcatccag aaacagcatc aaacaccatg
    26101 cacgcaatgg caagtcgagg atatgattac cctgtcgact ttcctcgcct gattcaggaa
    26161 aagcgtaagg agtgggagca gattgcaggc atgcctgtag ccgaagtatt ttaagataag
    26221 ctccctccat aacagccggt tcaaatgagc cggcttttgt tcattacaac agataactta
    26281 tgccgttacc gataaattcg accaagtgct ttaatcgcag caatttttat ttccatatca
    26341 tcactttgac tcaatctatg taattcacga gtaatgttct ccgcctgaca ccggccttca
    26401 cctaatgcat agatcgcagc aagtgtaacg tcttttgatt tactcttcat catttcaaac
    26461 aagaaagtat tagctatcgc aggaggcatg ctcataatca atcctcttca tgaaataaac
    26521 aatggcactc acttacaaac aggagtccac tatcgcaagc gactcaactt agcaatatct
    26581 ctcaatttga atgaaaaaac cagatggcat gtgacaggga accgtccgca tgatgtccgt
    26641 gaccatttaa ccccataagc taaccttgtc acaaacgggc gcagaacagc ctgccagaca
    26701 gacaacaaaa caaaagtcca agataaaaca tgaataccgg tatctcaatg cgaagaaata
    26761 atctccgtag aaccccccat gagaaaaata tcatatggga gaaaatcgca attatcacag
    26821 ccagcgcatt cattattttc gctgtgctct ggcattaatt attttcaaca caaaaaggaa
    26881 aaaacaatga atctggtaga cgcctttgtc aaaaaagtaa tatccgggcc atatgaagaa
    26941 tatggaaaat ggtggataga tgttgaatac atttcatggg gtgttcccgg gaaaacaaga
    27001 ctgatgtttg agtcaaagga gcaggcactg gaagttaaag aagggtacaa atttttaacg
    27061 tgagatctct tttttgatta gcaggatttt tgacatagtg tgggacaaag catagaattg
    27121 attatgttag atacagactg tcttttcccg cccagagcaa ccaactctgt agcggaacag
    27181 taaaaaagcc gacctcacca gtcggttttt ttacatctgt tgtttctgca aatccgcccc
    27241 accatgcctg ttataccggg aagactcatg ttctggttac cgtcatcacg acagaagtgt
    27301 cgccagacag tgctaacctg cggattacaa gggtggttgt tatcaaatga acagaacact
    27361 attataagaa cgttagctga aaagagattt cctccagtca gggccaccaa ctctgtaacg
    27421 gaacagtaag aaaaccgacc tcatcagtcg gtttttttac atttattact tctgagtaac
    27481 gacaagctgt acgtagcaag ctccctctgg cgtggaggac gtcagcgggc tactataatg
    27541 ttgtctaggc attacagtag agcccttggt tgattgatag aacaatctcc cggggctttc
    27601 acaaacgctt tcagcttaca gcctcaagct ccccaccgcg attttgacga ctttcgtatt
    27661 ttgcaacaat atcaggtggt cagcctttcc cgtaaactta tggcatgttg cattaatcag
    27721 gtagaacaaa ttatcatttt tagcgtcagt tatagacagc tcttttctgg tcagagtcat
    27781 caactttgta gcgtaacagt aaaaaagccg gcctcaccag tcggtttttt tacgtctttt
    27841 gtatctgcaa aatccgcccc gccatgcccg tcacaccggg gaaactcatg ctctgaacct
    27901 gaaccagcca tctcaacttt gccgtcttct gaaaaaactg gcacattcag ttcgataact
    27961 acccataaat acagaaagaa aatccgatgt cagaaaagtg gagtaaagaa ttcgactctt
    28021 gctttcaggt ggggagcata gaagaaattg ccgatgctct cgagaaacgc agcggaagcg
    28081 aggaaaacgc gttagccatg ctggcaatga cagccttcac actcatgacc cgacgtggta
    28141 tctgcgaaat gcagaacgtg gcccccgatg gcaaaggcat tcggctggag ctaatcggct
    28201 tcaggggaaa tgaaacaata ccggatacgc ttcattgaag aagaaagggc gcaatgaggt
    28261 cagccttcgc aacaaagcgg cggcagaaaa cctgccgccg tgttgcccgt taacgtttaa
    28321 cttcgtaggc taacgttgcc acaagcactg tgtttccctg ctggagccgg agtacgcaaa
    28381 gcgaatccct caccatccag acaaaacaca gaatcgtcac acagatgacg attaacatca
    28441 ttaaaaacgt tcgctgtggc atcatagccc ctccattgcc ttacggcggt tatcgggcta
    28501 ctataatgtt gtcgaagcat tacagtagag cccttggttg attgataaaa aaatctccag
    28561 gggctttctg ctgtataccg tccacaaaac gctttcggca tacagcctca agcgcccgca
    28621 gctattctaa cgactttcgt atctgcaaca atccttttat cacacggcta attcctctgg
    28681 ttagctctta tcgcctgcaa ataaattttt aacctttccg tttgatttaa attccagaaa
    28741 tggagacttt gtcatgtctt acaatcgaca gcctgtcgca gaagatccta tgcagatatg
    28801 gggcgctgtt ggtgtccttc ttatcctgct gctattcgtt atatggttat tcttgccgga
    28861 agtggtttac gccagctgcc tgattcttca taccttatgg ggactggttg actggggacc
    28921 atttcataac tatgcagcac cacgatacaa cctgcttgcc atgaccggta acaacgccgc
    28981 caacataagc tatagccagt gggttaacgt catggagcag accataggta ttctgtggat
    29041 gtacctctta cctgtgacac tctggtgttt gtgggagtgg tatcaacatc cgggacaaag
    29101 tcgtttcacc cgcagaccag tagatattac ccgcctgcca cacatctttg cttcgttgtc
    29161 ccctgctatc gcccctgtac tggcagatgg tgatccggaa aaactctttc atggtggcaa
    29221 acgacctgaa cggcgggttg ctctcacccc ggaagcattt gtcgagcagc atactctcat
    29281 caccaatatg cagctcgatg ttgcagctgc aagacgatgt ttcatggccc agttaggtaa
    29341 acctttaacg tcctggaaag acatggcacc acatgaaaaa gcgctctttg ccatatttgg
    29401 tcttcagtat ttcctggatg atcgtaaggc agcattaaag ctcatggata cactgaacct
    29461 ctcatgcaga attaaaagca aacgggacag tgggaaattc tgtacccctg tttattcact
    29521 ggccaaatca gctttccaga gagtgattaa aagcaacgga gcacagcaat ggctgaaaca
    29581 acatcgctac gtccgcagtg ggctggtctg gctgtatgca catgacctgc ggcttacgcc
    29641 ccccaactgg atttggctga aaggcgtgga caggacgctg ttttatgcat tacaccgcgc
    29701 caataccacg aaaggattta ttgaaggcgc tggcgtggtg gccgttgcac gtgcagaggc
    29761 cgaagccatg cgttttggcc tcccctgccc tgaaccctgt gttgatgaag cggtggaagg
    29821 cttacggcgg gatatgctca gtctcggtct tatctgggat gaaccacaac cagatcgcga
    29881 ccggaaacgc cgcatcctga ccaactggtc cctcaccgac gacatcctgc cccgcacacc
    29941 tgctacagac aacgaattct gattatccgg agaactgaaa atgacaatcg agtactttgc
    30001 aacacgtatt gcaaaacata tttccgtgca ggcaatctgg ccggatggca ggacagaaat
    30061 tattgccgtc cttccacggg atgccctgtc agggctggta acacgaaata atcaactgat
    30121 tcatatagcc tttgacgcca tgggcacccg taacaaagaa accgtcctga ttgataaaca
    30181 ggagcataac gctgaccaga tacttacagc tattgattcc tgcctgcgcc ttgaatatct
    30241 gatggaacgc cgcttcagca gaacaccttt gttccgtggc ataatcgcca gcgttgtgct
    30301 gttcgtaatg gcaacgattg gcttctctct gttccgctat gttgatcgtg tattctggga
    30361 tgatacaacg cctgaagcag tacagacagc aggtgagcca cgactgcttc cccctcacct
    30421 gaatcacact gtgccattaa atgaaggcat tcaactcccg gttcccccga aaaaagacgt
    30481 ccaggtaccg gagaaaacaa tcacaagcaa aaatccggaa gccgcagctg cgcgacataa
    30541 tctggctact gttctgaagc ggaacgccga tcggggcatg tttaccatca acctgtcatc
    30601 cggtcatgaa cgaaccctgt tcgcatttct cgatcctgcc tgtcctaact gcagacttct
    30661 ggagccggcc ttaaaacgcc tggccagcga cttcaatgtc gttatctacc cggtttcagt
    30721 tattggtgga gaggaatcca ccgaccgtgt ggcaccactg ctgtgtgaaa aagatgctca
    30781 gaaacgtgct gccggctggc accgactgta ttccgcagat aacggaatga tgacgccatc
    30841 agaagaaaca acgcctgcag atgaaacatg cctgaaagca gccagagctg cgattgatgt
    30901 taacaatgtc gccttccgta agttcggatt tgccggtacc ccatgggtgc tgtccgacac
    30961 gggctggcat ctgcctactg gaattctgca ggaaactggc acgcttaatt tattcctgaa
    31021 aaccaccgac agcgagtctg accatgagtg aacatcgcgt taaccccgag cttttacacc
    31081 gtacagcctg gggaaatcct gtctggaatg cactccagag tctcaatatc tatggctttt
    31141 gcctggtggc aagtcttgtg gccagtttta tctggccact tgcattaccg gcatgtctgt
    31201 tgttcacact gataacgatg ctggtattta gtctgcagcg atggcgctgc cctcttcgta
    31261 tgcccatgac gctggaatgt gctgacccgt cacaggacag aatgattaaa agaagccttt
    31321 tcagcttctg gccaactctg tttcagtatg aggtcatcct ggagtcaccg gccagcggca
    31381 tattttatgt tggttatcaa cgcgtcaggg atataggtcg ggagttgtgg ctgagtatgg
    31441 acgatctgac ccgccatata atgtttttcg ccaccaccgg tggtggtaaa acggaaacca
    31501 tctttgcctg ggcgattaac ccgctttgct gggcaagagg attcaccctt gtcgatggca
    31561 aggcacagaa tgatacggca agaacgatct ggtatctggc cagacgcttt ggccgtgaag
    31621 acgatgtgga agtcatcaac ttcatgaacg gaggaaaatc ccgcagtgaa atcattctga
    31681 gtggtgaaaa aacacgacct cagtcaaata cctggaatcc cttctgttac agcactgagg
    31741 cattcacagc ggagacaatg cagtcaatgt tgccccagaa cgtccagggg ggcgagtggc
    31801 agtcccgggc cattgccatg aacaaggcac tggtatttgg tactaaattc tggtgtgtgc
    31861 gcgaaggcaa aacaatgtcg ctgcagatgc tccgtgaaca tatgactctc gaagggatgg
    31921 ccaaacttta ctgtcgtggc ctcgatgatc agtggccgga agaagctatc gcaccgttac
    31981 gtaactacct tcaggacgtt cccggtttcg acctgtcgct ggtcaggaca ccatcagcct
    32041 ggacggaaga acccagaaaa caacatgctt atctctccgg gcagttttct gaaactttca
    32101 gcacattcac ggaagcattc ggggatattt ttgctgaaga ttccggtgat atcgatatcc
    32161 gtgacagcat tcacagcgac aggattctga tggtaatgat ccccgctctg gatacatcag
    32221 cgcatacaac gtctgctctg ggacgaatgt ttatcaccca gaaaagtatg attctcgccc
    32281 gtgatttggg ctaccgcctc gaaggaactg attccgatgc actggaagtc aaaaaatata
    32341 aggggcgttt cccttatctg tgtttccttg atgaagtggg ggcatactat acagaccgta
    32401 ttgctgtgga agccactcag gtgcgttcac tggattttgc tctgattttg atggcacagg
    32461 accaggaacg tatagaagga cagacaacag ccacgaatac tgcaacactg atgcagaaca
    32521 cggggacaaa atttgccggc aggattgtca gcgagggcag tacggccaga acgctgaaaa
    32581 gcgccgccgg tgaagaagcc agggcgagga tgaacaacct gcagcgtcag gacggcatat
    32641 ttggtgaatc atggattgac agcccacaaa tcagcatcct gatggaaagt aagatagatg
    32701 ttcaggagtt gattgaactt catcctggcg agttcttttc tattttccgg ggagaaaccg
    32761 taccatcagc atcattcttc atccctgaca atgagaaaag ctgcagtagc gatcccgttg
    32821 ttataaacag gtatatcagc gtggatgcac ctcgcctaga ccgtctccgc cgtctggttc
    32881 cccgtacagc tcaacgtcga ataccgtcac cggaaaatgt cagtgccatc attggcgtcc
    32941 tgactgcaaa accctccaga aaaagacgaa aaattcgcac agagccgcac acgatcgtgg
    33001 atacattcca gcaacgcatt gcaggacgtc aggcggctat ggcaatgctg gaagagtacg
    33061 acacagatat caacgcacgt gaaagtgcct tgtgggaaac agcggtaaat acgcttaaaa
    33121 cgaccacacg ggaagagcga cgaattcgct atatcacgct gaacagacca gaactacctg
    33181 aaacaaaaga ggaaaatcag atatcagtga gagcagaacg agcaggtata aacctgttaa
    33241 cgcttccaca ggacaataac cacctgacag ggcgtcctgt aaacgggttt catcataaaa
    33301 aaaccaaccg tccggactgg gacggaatgt actgaacagt ggccgcgccg gattctggcg
    33361 cggccttttt tttaacctgg agaaggcggt tcccagcgtt tatcctgctc cggcggaggc
    33421 agtgatgcgt catcgttgct gttcgccgcg atataatcgc ggtagtagcg ttcacttcct
    33481 tcacggtgat gatccacgtc cggtcgcgta atcctgtagt cttcgtgacc ggtacggcct
    33541 gtcacattat gccaggcaac catttcagca aagacctggt taaattgttt gtcgtttcct
    33601 tctggttcaa aacccatgcg tggatcacgc ccgaataata ccggtgcaat caaatccagt
    33661 ttatctgcca gcgcattgcg gtcatggtga ttacggaaaa caaccctgtc accataatcc
    33721 gtacagacaa actctcccgt ccgacggtca cggaaacgaa cactcccgtt cttctgcaaa
    33781 cgggcctcga gatcaccggt attaccgtat accggcgttc cgcccggttc acaaagcacg
    33841 acacagcggt ctgttgtcgt tgtgcgtgac ttatctttac ggcgatcgcg ataatcccag
    33901 cctctcagct gcgatacagc agccctgtct ccctgagcag cctgaatttc gacccactga
    33961 cggtaagagg gtggatacca cttcccgtca gcaataagtt tctgccgctc atccctgatg
    34021 tcttctttca gcctgatcaa tgcctgcatt cgctgaactt ctgcaatgtg ataatgcagc
    34081 ttacgtaatg ccggatcatc gtactgcgca cgaatgtgtg acttccgcag acggcatgcc
    34141 tgatgaattt cccgacaacg ttccccataa cgcagatctg gtttacgcca ttgttcacgc
    34201 catgccagat agcgggcacg caggtcagca cgggcctcag ctctggcttc acgtcgctgc
    34261 cggcgcagca ttgggtcacg tttactgctg accccgtacc tgtcactgac agccagctcc
    34321 gggttatagc gactttcagg ttgcaccctg tcaaacaaat ctgctggggc actcacaaaa
    34381 ggtccggcct gtggctctgc acgccccaga gtcagatcag gatgaatgct gctggccttc
    34441 accggcgttt gctcatgatt aaaggcatca acgacaacaa gcccgtgatg ttgtttctgt
    34501 agcatcagtc cctgttgtgc aaacaactca tgacaacgct gccaggtaaa ctcaccctgt
    34561 gtgatcattt cttcaatctg agggctacaa tggctgatgc tgtatcccca cagactttct
    34621 ttgtcagaaa acagttcgcg tttgatagcc ccctgcggcc ccgtacctgt acgcatacgg
    34681 tgccattctt tatcggtcgc aggacagctc tccatacgac gaccacggaa gcgttctgtt
    34741 ggcgtaacct ggagaaaaat atctgttggt acaggctgcc agccaccatc gagttgattc
    34801 acattgtcga gcgtcagcag tgaccatacg ctgtcagcac gaacgggagt ctggttatga
    34861 tcataaccgt cacagataac caggtgacca tgctgaacac gcatccataa tcccgcttca
    34921 gccagtgtgc ggtgaatagc ctggcagttc tccagccgtc cttcccgtgc catttccggc
    34981 agacgttctc caagatgacg acaggcatac tgctgcagac tttctgtttc agcgattttt
    35041 tccgggcgaa catcagctgc aatgaagtcc ggattatagc gtcctggtgc ttccacctgg
    35101 ctgaaaatgt cttttggtac tggcgtgtag tcacccattt ttttcatgag tttttctgca
    35161 caccaggaag ggccaaacga gtcaagctgt acaccttccc tgttgcgatc ccagccatcc
    35221 atcaccagaa attttccgtc catctgagac aggtacagac catcttcagc aagacgacga
    35281 tgcagggata accagtcatg tacaggttca ctgcgtaaac cagctaccgc tgtctgcgca
    35341 acatactcgc gaaaagtttg tttttttccg cgtgtccaag cgttctggcg atcacgttca
    35401 acggcagttt tgcgaacgat acgatttccc ggcgcatgga cccagcaacc gttatccgga
    35461 gcaaaaccat gcttcagttc aagctcacgg caggcacggc tgagtttttc ctgactccat
    35521 gaaaggcaat tgagataacc tgtaaccgga tgcacccggt tgaccgcaac gtgaacatgc
    35581 aggttatcag tatcggtatg cacggcagag acatactgat gttcacccag cccgagagat
    35641 ttcagggtat ggcgtacact gtcataaatc tgttccggac gcgggctttc atgggcctgc
    35701 caggaaagaa tgtagtgaaa aacaggatca gtattatctt tcgcatagtg tgcctgctgt
    35761 gcaatgtact ccatatctgc agcggcagtt tcaagcgatg tacagttgtg aaaacaggtc
    35821 acaccataaa agttaaccca ttcgcagccg tccttcatga catcaaccag tgccacgaat
    35881 gattcatttc gaaggcgtgt tgcataatca acaagacgac tgaagcggct ccggtgcggt
    35941 tgttcagcct gcgaagaaga agataaattc agttcctcat cggtcatgtc atcccggaca
    36001 gagacgtagg acaccaggtc ttcgaacgaa gacttgccgt cccttctctt tttcggaatg
    36061 actgcattca ccggagaatc ctcaaccttc cattaactgt ttacgcaatg tatttgtaag
    36121 ttcggttatg gcaacaagta cttctgcgta ttccttgtca ccggttcttt ttccctgaac
    36181 aaacagatgc ttctgcatcc ttcccagtct cattaactcc ttcagaaaag catcatctgt
    36241 ccgggagtta attcgcttat tcagtgctgc atttcggatg taagcagata cagtaagtcc
    36301 ggaatcttca gcttttttcc tgatagtttc atcctcaaca ggagagaatc tgagtgtcct
    36361 gacaactgtc ttttgccgta cctcactttt ctttcttacc gcactatcac tcacttcagg
    36421 ctccttacgg ggtgtcgggg cgaagccctg accagatggt aattgtaata gcgtcgcgtg
    36481 tgacggtatt acaattacac atcctgtccc gtttttcagg ccattatagc ctgttatttt
    36541 tgtgcatcat agtcttatgc agacggcaga ggcagggcgc agccctgcca ggagtcagtt
    36601 tttgatgata aaatcagact tcaacatgaa acggagagaa agtgccaatg gcttctaaaa
    36661 aattttactc agatgatgac atccagctgg caaaagctgc tttatcggaa ttgccagatc
    36721 tcaccgctca acggaaaaca ttgcgtgatt ttcttgatgc cattcgtgat gacattattg
    36781 tcctgataag gacaaagggt tatacactgg cagatgttcg tgacacgctc aaaaatgcag
    36841 ggtatgaagt aggagagaag gcacttcgtg acattattcg ggaagcagaa tcgaaaaaac
    36901 catcccgccg ttcttcctct aaaacagcac ctaaaaagac agattcaggc aggaaagatg
    36961 gcatcgatat gaacaacaat tgatgtgaca atgtcacatc gtgttctgag attatgatga
    37021 ttacagaaaa aaagccccgg cataaatacc agggcttttc tgtttaatca gactcgtggc
    37081 ggcaatacac ctggataatg ccgtgcaata atatcattca gtttttcaac aaggtcagaa
    37141 cgattaaaga caatgtgtac ggtccctttc tggtagccac gcaccgtaaa atattcccct
    37201 tctaacagct taccgacatt gtcgccgttc ccgagaaatt caccatactg cgccccgatg
    37261 ctgttcctga agtcaggaac gttgcgcccc tccagcagat aaaacggacg taccaggtca
    37321 tccagtgcct cccgtccgct gcagtccagc gtcacacgcc cgttactcca gcggtacagc
    37381 aggttttcaa taatgatttt cttacccaga cggcagggat tattggttct gtaatcccat
    37441 gacaatttcc ggtagacatc aatcagtccc tgttcaaatg tctgcatctt gcaggcattc
    37501 agatggcgga atgttgccag tacattgtcc agggtgattt caggacaggt gtcgctcatc
    37561 agctggctgt tccactcatc acgctggcat gaactcatga aggtgtacat gcccgtatct
    37621 gtcatcaggc gctcccagat tttccggtcg gcaagacggg tgatattcct tttcgcttct
    37681 tccggtttat ctatgcgacg aacggaatca gtcacgcagt cttcaaaccc gtaaagaaaa
    37741 atatcacctg acgcatcgag cagaatcttg cgcgctgtcg ccaggcattc catcgcctgc
    37801 atgaacagtg caataccttc gttacgctgc gcgatgatgc ggtcgatagc cacagacgga
    37861 ataacatctg tcgtgccggc agtattcagg tcagcagtgg gtaaagtctg attcatcaca
    37921 ttgtctcctc atcgtcacga ctgccgggtc agccaggtca tttcccggag gagcgaagct
    37981 ccttctgccg tccgggtctt cggggatttc cccgcagtgg acctttccga cgggggacgc
    38041 tcaccacgtc acggggcagt tgtccggggg cagacgcaaa agtttttgac gcctgcggca
    38101 aaaagttttg tggctggtac atctctcccc tggacgactg aaacgggatg tggtcatgta
    38161 tgtacccccg gaaagtccgt ctgcggagaa caggccgcag tgcggcggca gacaggcaga
    38221 gacagctgcg ccatcaggcg cagtggcctt acacaccgta aggtgtgcag ggagcgccgc
    38281 atacggcgcg actgaagaaa aacgacggca caacaatggc atgtggtggt cactggcaca
    38341 ccactcccgc acaggtgaaa acagagaaaa ccgcacgaca tttacaagca aaaaaaagtg
    38401 aaatttcttc atttttttac acttatttat cgcgctgatt tggcaattgt gatgataaaa
    38461 taaagtgaag ttttttcact ttttcaaagg tgttttatga ccggctggga actgcgaatc
    38521 tggcgaaaaa gcatgctctg gtcacgcgaa aaagcggcca gagaatttgg cgtgacgcag
    38581 agaacatggc acgcctggga aaatgcggaa caggtggacg tcaccgtctg gaggaccacc
    38641 caggcacttt cagtccgtga cctgctgcct cacatgcagg ggatgcgtaa ggcagatatc
    38701 atcaggcgac tggaaaatga actgggggaa actgcaggga atgtgtgagc gtgattcaca
    38761 gcctggctga atgccaggct actgctcatc aggaaacagc tttttcagtt cttcaccgga
    38821 aagtccggtc gcctcctgaa tccgttccgg cgtccagccc atatcccgca gccggcaggc
    38881 tgcttcccgc gccacttcaa gcgcaccttt cttaaaacct tctttaaaac cttctttaaa
    38941 accttcttta aaaccttcgt cgaaaccttt ctgtataaga cgttctgcaa gcgtcatact
    39001 gttttctctg ctcctgctgg caaaaaagcc cgggattttg ccgggctttg cggttctcat
    39061 caatgagtga ttttcttcag ttcgtcatcg gaaagtccgg tagcctgctt aatctgctcc
    39121 ggcgtcatcc ccattttctg aagctggcac gcaatagcca gggctttttc aagcgcacct
    39181 tccatcctgc cctcctggcg acctttttgc tcaagacgtt ctgcgatagt catcagttta
    39241 tcctcatgct gcggcagacg ctcagccagc gcccgcataa attccggtga tacagagtcc
    39301 cctgcgttaa cgatgtaatg aatcagaaca cgcacctgct cgtctgaaat ttccaccatg
    39361 acctgcggga gtttgtccag cagctccatc atgtcacgat ggcggatatg cttcatcagc
    39421 agcgtcagtg cggccatccg gcgatggttc atgatttcat tgtcatcaac gacagtgata
    39481 tcaaccagcg gaaacggatt tgtgtatatt ttagccgcaa gtgccggatt ctcaaaacag
    39541 tccagccagt tcatgctgta cggatacggg ctgcgctcac cgtgatagaa cagcaccgga
    39601 atcaccagtg gcaatgtttt gtgctgctcc agatgtctct gcatagccgc cacactgtag
    39661 cgtaacatgc gaaaaggcat gtacagattt tcggtgctct ggtgctcgat gagcgtataa
    39721 acatagccgt cttcaccccc ggtggttttc acgctccaga ggatatcgct ggcgtactga
    39781 tgcaggtccg gctcaacaaa ggtggcgggt tccagcttca gcgtggacag gtcgcacaac
    39841 tgccggtact ccgcaggaag atgcagttcc agaaaatccc tggcaacgtc gggattcgcc
    39901 aggaacgacc ggaacgcggc atcatgcggc gtgggcgtcg tggtggtttt cttcttactc
    39961 acggttcctc ctggtgagat gtctgaacgt atcctgccgc ctgcacaggc agacggcaag
    40021 ggttaatcag tggcagaccc gctcaatttc aagcgcgcgg agcaggtggc cccattcgct
    40081 gactttcatg gcggggatac gtacccgctt ctgctcactg cagcgtctgg cgatatgacc
    40141 gctcatcgcc aggacgtccg ggttaatctc atcctgtgcc agctcctgac gtctgaagcg
    40201 ggtatggcgg tgcaggggtt tattctcccg caggcactct tcacgcagac gctttacata
    40261 ctcggcggtt gcgaagataa ttgatggtct catggcataa tctccataga tagtgattga
    40321 gatgccggac ttcctggcgg ggaagcgccg gcggagagag gcagggttta tcgccctgcc
    40381 tttttttcat ttcggacagc gacgcagtgc cagcgcgagc gctttcatct tccagccttc
    40441 cggcgtgcgg tacatcacct tccagtagcc gtcgatgaac acataatgga agcgcacctc
    40501 ttcagtgctt tcagtggcaa tagcctccct gaaagaacgg tactcacgcg cctcactgtc
    40561 catccggaaa ccactgtcac gtccgtaata agccgtcaca ccgtccaccg ggttctgaag
    40621 cgtatgcccg gcgggtttgt cgcaacgggg accgaggcaa cggatatcac cgtgttcaac
    40681 cagggcttcg gcctgctgac cggtggcata gtgggtatgc aggatgcgac cgttccaggt
    40741 cggctccccg tgcaggtggc agtaaacggt acggaacacc ccgtcgcggc aaaaaacgga
    40801 aatcgtgctg ctgactgtca tgaaaacgtc tccttctgct gaatcaggtc gccgggccga
    40861 ccggttgctc cccggagggg cgaaagcccc ttctgccgtc cacttcttcg gggtttctcc
    40921 ccgcagtgga cctttccgat ggggcgtccg tcaccacgtc acggggcagc tgtccggggg
    40981 cggacgcaaa attttttgcc gggtttatgg ctaaaaattt tgtggacggt atatcttccc
    41041 ctggactgct gaaacgggat gtggttactc cagcccccgg aaagtccaca gcgggaaaca
    41101 ggccgcaggg gtggcggcgg aagggttgac tgcgccatca ggcgcagtgg ccttacacac
    41161 cgtcaggtgt gcagggagcg ccgtttccgg cgcgacaggg gcggcgcgac cggaacggtc
    41221 gctgcaagcc tggtttttca gacatcggac cgtagcggca gcccgaaacc gcgccagcgg
    41281 gttcggcgga gactggcggg tgcgccagca gctgcctgtc ggagtcgggc ctgacgaccg
    41341 gatgccgcca ggcagccggg agccgaaggt gtccccgcct ccggaaatca gaacaacaga
    41401 aacgacataa cagaaaaatg cctcacacca tgacgggcag gaagggcagc gccgcaggcg
    41461 cggccctcct gcatttcagg caggcgtaag cctgccaggg ttttccggcg gcctggcagg
    41521 ccataccccc gccggagcgg gggagtaaat caccgacgga acacatgacc gtcaataaag
    41581 gtgaaggagt ccaggaataa atcccgcgca tacgcctcat agtcaaaata gagcgccacc
    41641 gtctccggca cgtcagccag caggccggta tcactggcga actcaaccgc aaaagcctcc
    41701 tcactgtcag cctcgcccca ccaggcatcg cggaaggtgt caaaatccgt ctcaccggta
    41761 tcctccaccc agagacgata agcctcttcg cagccttcat cccgtgccag gcggaagcct
    41821 tcaacccagg cccagttgat atggcattca gaggccatat tccccgggaa tccctcataa
    41881 tcctgaaaca tcagttcagg atcggcttca tcctggtgaa gagcacggca ggcggcgaaa
    41941 aagtcgcgct catcatcaaa cgtggtcagg tcaaaccagc gtccggcgat gcttccacag
    42001 ttgtatttgt gccaggttcc aacgtataca gcaggtgcaa caacagacat tcccgaatcc
    42061 tccatagtca catgttctgc gacaccgggc ggtgccgtgc ctccataaaa gccgggcgat
    42121 aaggcgggga tgcaggggcg caagggaagc cgcagcctga cgcacacggc tgacgggagt
    42181 tgcagggtga ggccgcgaaa cctgagcgga cgaacgaccg gaaaatcacg gcagacggga
    42241 aggagggacc gggtgaccgc agcggcgaag cgtacccttg catccctgcc agcccggcta
    42301 agatggaggc acggcacagc ccgcacacga cgctgaggcc acagagctga aaccccacaa
    42361 ggccatgccc cgcatggccg ggtaaaagcg gagccgccgg cgacttcctt attccggcga
    42421 gtgcagagga cacgccgcat gacctccaga ccacccgtga ctgctccccg ccctgtcggg
    42481 cgaggcttcc cacttctcag gccgcaaccg tctgtgcgac ggatttacgc tggcctccat
    42541 gggcagagac gacgagtccc gccgccttta gttccagtat tcctttttgc cggatgttga
    42601 gtgccgcatt gatatcgcgg tcgtgctctg ctccacactc agggcatcgc cagatgcgtt
    42661 tatgaagtgg catttccggc attttgtaac cacaacaatg gcacgttttc gaactggcaa
    42721 accactggtc gagttttacc aggtgaacgc cttttgtcgc tgccttgtac tccagctttg
    42781 tgatgaagct gtgccagcca gcatcaccta tcgctcttgc cagattgtgg tttttcatca
    42841 tgttggctgt tttcagcgtc tccacaatta ccgcttggtt ttcgtcgaca atcgcgcgag
    42901 agagcttgtg ttgaaaatca gcacgggcat tcgccacccg ttcgtgtaag gccgcaagac
    42961 ggattctggc ctttttacga ttcgcgcttc ccttttgctt acgggataat gctttttgtt
    43021 tgcgtcgcag attacgactt acattgataa gatggcgagg attcggaact tttacagcat
    43081 cagaagtgat ggcatagtgc tccagtccca tatccagacc tgtaatcttt tcttccttca
    43141 ggtacgtggg tttctctggt gcggaagcgc catcgtcaca aagaatggaa gcgtagtatt
    43201 tccccgttgc agaacgggtg acagtgatgc ttttcagctt tccatgaagt tcacgatgaa
    43261 ggcgtgcttc tatcggggcc agtttgggga ttttgatggc attatccagc accttaatcc
    43321 cgacacagtg atagctcgat tgttttccgt gtttgcgttt aaacgtcggg aaccgcgctt
    43381 tcagcttcgg attaaaaaag ttggaaaatg ccacatcaat attgattacc gcctgttgca
    43441 atgccattga gtcaaattct ttgagccagg catatttacg ggactttttg gccacagaca
    43501 acaacggttt cagatcgtta cgcggactta aatttactcc gtgtctctgg taagcgtgtt
    43561 ttttgatgtg aagagctttg ttgtacgcaa aacgtaccgc accgaactgg gcgttgagaa
    43621 atgcagcctg ttcaggagta ggatagatgc gtatttttgt tgctcttaac atagtcaccg
    43681 ctcattggta caggttttta tgctaacacc gtaataatat ttttaaagcc cttcgggctt
    43741 ttccgccttt cctccccacc cgcattgggc gagggttctc ggcggctttt cgctgatttc
    43801 atcatattgc gttctccagc ttgttcggga tcatccactg ctcaagtgca cgtatctgta
    43861 ccggtgcacc acgaccggcc tcaccggctt caaaaatcag ccgccagagt ggttcctcct
    43921 gccagaaaaa ccggtcaaat gatgacagtg atggaaaacg cccgcaccac ccccagaaaa
    43981 tcgtttccag atcatgctcc tcaacaacac cagaccagcg ggacaaccag cttccgaccg
    44041 tggcgggagt atgaaacgca aggtcaatct gcgcctgagc aaaacatgtc tggtattcca
    44101 gttcccgtcg ttctgcctca cgttcccgct ggcggctgta tttctgctct gtcagcgtgg
    44161 ttttctgacg acgccgctca ccttcacgaa aaggaacgga cgggaacaga cgatgcccag
    44221 catcggatgg caggggaaga acacagactt caccaaaact ttcaatcagt ttatccacgg
    44281 cagccagcca caggagacgg ttgccatgaa attcctcctt cgtcagcgca ggagcaaaaa
    44341 agcggagatc ggtcagcgaa atccggcggc tgccattcag gcagcgaaag aaagcgctgg
    44401 cataaggcca tgctgaaagt gtgcgtccct gacgacgacg ttgttctgtg acagccacag
    44461 cctgcatggc ggcctgttgc tctgcgctga gggggatcag tgcccgtgaa cgtgcgctca
    44521 tgcctgacct ccttctgcca tcaggatatg gatgatgtcg ttaacactgt acccctgcgc
    44581 atcaagtgtc gcggcaagcg ccagcgtgtg actgatagcg acaggcgtga agatatgttg
    44641 cacctgaacg acggcgaaag gctgtccacc acaattcacc agaaccagca tccagagctg
    44701 agagacgtct cccggcgaac ataatgccag gtggaaacgt tcgtgggctg gcgtgaaacg
    44761 aacctggacg gggaaaaagc ccccgaactc actgccatac tcgccattca tcatccagtt
    44821 agccggtgcg tccacttcac gcatcacctc gtgagtgaga ttacggcgca tatcgcttcc
    44881 cgcagcacgg atatcttcat attcctgtgc gttcatggac tgcagggcat tcagggtcag
    44941 ttcagttttc atcacggtat ctcccttgct gccgccccgt ctccggcggg gcggtgtggt
    45001 tgttcatcag gcggcatcag ccaggttatc ggtgcgttca gtggcatctg tctgtggatg
    45061 tggagcacac atccagcctg gaacccagcg gttgtctttc atatggtgct ctgcatgttc
    45121 agccgcatca cctttcttca tcttctccgc gtcccgtgcg gcaccggaca gtccggcctc
    45181 attcagggct gcgataattt gtggcttttt caggtgtccg aagaagtttg cttttgtcgg
    45241 ctgccaccag tcgcgcatgt gaaaaccgat ggcgctctcc agcgtatcca gcgggctgcg
    45301 tgacgtgtga ccacactcgc gggtctgaac gccgtggatg ctgcacgcgg tgcagaaact
    45361 gagcagggat aacagcacct cctggctgag cgacaggaac gtcgtcatgt cccgtgacca
    45421 tccctccggt aacagggccg caagacgggc tttttctgcc atcagcgcca tgaacgcggc
    45481 accttccttc cctgacggcg catcgctggt cagcgaataa tgtttacatt ccaggctgat
    45541 ttgtgctggt ttactgtacg ctccgctgcc aaacacattc aggcagagcg tccatgccag
    45601 cagtgccaga gatttgtccg gttgctgcat gagtgccgcc tggactgcca gcgtgcgttc
    45661 ggaagacatt ttcgtcagca gtggcagact gatttcctcc actgacgctt tttcctgcac
    45721 ctgttccgtg cggtcagcgt cgtcagccgc gtcatcttca ctgcgcaact gcacaccacg
    45781 ctggacacac acattaccgt aacgccagga caccaccaca ccgcttccgg tacgcatctc
    45841 cggcgtccac gctctgacct tcgccatgca gcgcatcagc ttcatttctg cttccagcag
    45901 gtcggattcc tcacactggt tttccagcgc gtcgtaacgc gtcatcagtt cgttcaggcg
    45961 ttcttcttct gcctccgtca gcaccgcttc cggctccggc agacagcggt atgttccggc
    46021 atcctcacgg cactcaccga caggctccat gcgcccggcg caccattccc agccttcggc
    46081 ttcccgaagg tgttcagcga cagcctggag tttttccagc agggcggcat cgagcgccac
    46141 gcagtccaca tagccaccct cgtcgtcgct gaacaaatcg gtgcgcagtt cgtctggcga
    46201 gaaggcatca gcccccacga agcggaattt actgttcccc gccaccgcca cttcactttc
    46261 ggtaatcagg ttgcggataa cccgcacatc cggtttaccg ccccatcctg actggcaggc
    46321 ggcttcaaac acctgcacct gacgcgcggt gtcgttctcc agcgccagcg cctgacagtg
    46381 ttcggtggtg atgcggtctt ctgccagcgc atcaaggatg acgggtgcaa ggtctgccag
    46441 tttcagcatt cgctggacgt ggcggggtga atagcccagc aggtcgccag tctgcgcagg
    46501 tgttttgcct tcctgcgcca ttgcgcggaa tccggcaatc tgttcggctg ggtgcatatc
    46561 ccgacgatga ccgttctcgg tcatcgatgc agccgtcgcc agttcctgcg gaataatttt
    46621 cacgcggaca ggccagtcag ccggaaggat gttgcgctct gccagcatgt tgagtgctgc
    46681 cagtcggcga ccgcctgcgg cgacaccgta acggtcacct ggcagggcat gcacgaccag
    46741 attctgcagc aggccaacgc ccttaatgga ctcagccagt tcgctgacgg actccgcaga
    46801 atacggcacc gtgcgcacat tcagcggtga cttaatcagt gaggccagcg gcacgctcac
    46861 ttcctccgtc tgcgccagca gggcagacag gactgtttcc tgcgtttttg cagatttacg
    46921 gcttgctttg cgggtggttt ctggttcaca cttcgttaca ggcataatca tccccttata
    46981 attgcttatg tcctgccgga cgttcgcgcg tccggcacct ctcttactta agaatcccga
    47041 aatccctgat ggcatgattc atccagtacc cggcaccgtc ctcaaaattc caggtacgcc
    47101 agaccagggc accgttattg cggacaacca ggcgaaaatg ttccccgtgg tcatcctcga
    47161 taaagacgtt ccggtactgt gcggcaacgg cttccgcctg ttcgcgggta aaggagccgt
    47221 caggcagccc ctgaagtatt ctgaaatatt cgctcatcct catatctccg gtgatgcccc
    47281 gcgcagggcg gggcggttat cacagtcagg ccagtcagaa cgggatatcg tctgaaaacc
    47341 cgtaatcctc cccctccggc ggttgcggct gaggctcggg ctgcgcggcc ttacgtccac
    47401 ggcctttcgt tttcacgcca ccttttttcg tcgcgtcagc actctgtggc tgcccattct
    47461 gctgaggctt cggttgcgcc tgagcgttct gctgtggtgc actccccagc atctgcatgg
    47521 tgcccgtggt cttaacaaga atttcagtga cgtaacgggt gataccgtta tcttcccagc
    47581 tacgggtacg gagttgcccc tcgatgtaga cctgcgcgcc cttgcgcaga tattcaccag
    47641 ccacttccgc gagcttgccg aacagcacca cgcggtgcca ttccgtctgc tcccgcatct
    47701 cccccgtctg tttgtcgcgc cagctttctg acgtagccac ctgcaggttt gccactgcgc
    47761 ccccgttggg gatgtaacgg acttccggat cattgcccag acgcccgacg aggatgacct
    47821 tgttgatacc acgtgcactc ataagaacct cctgactgaa agatgtgaga taaaccggat
    47881 accggcgacg ggacgttcat gtgccccttc agaggagcga aagctcctcc tgccgtccac
    47941 ttcacagggg tttctccccg cagtggacct ttccgatggg ggcccgttta ccgcctcacg
    48001 ggacagctgt ccgggggcgg acgcaaaatt ttttgccggg ttcatggcta aaaattttgt
    48061 ggccggtgca tctcaccctg gacagatgga acgggagggg gttacgtctg ccccccggaa
    48121 agtccacagc gggaaacagg ccgcagaggt ggcggcagga gggaagactg ctgcgccatc
    48181 aggcgcagtt tcctcacaca ccgtcaggtg tgcagggagc gcaggtcacg gcgcgacagg
    48241 ggcggcgcga ccggaacggt cgctgcaagc ccgggttttc acgcatcgga ccgtagcgac
    48301 agcccgaaac cgcgccagcg ggttcggcgg agactggcgg gtgcgccagc agctgcctgt
    48361 cggagtcggg cctgacgacc ggatgccgcc aggcagccgg gagccgaagt gggcgcaata
    48421 aaagacagcc agaaacggtg acagtgtcac ggaatatcac acctgttccc tgcatacagc
    48481 catacactac cttctgaccg gaaagccggg ccggcagcgc cgcaggcgct gcaccccgca
    48541 tttccggcag gcgtcagcct gccaggggtt ttcgcgcggg ctgacaggcg gcctccaccg
    48601 cctgccctgt atcacctgtt tctgctgccc tgaaggatat agtgaccacc gaggaaaacc
    48661 gcctgctggt tcaccacaaa atcgcagatt tcatcaacaa tctgcgcagt ggtgagcggt
    48721 ttctgcccca tttcacgacg ccgcgcatta atcacggctt tgtaattgcg cagaatttcg
    48781 cgggtttctg tgctgatatt catgacatgt gctccccgtc cagcgcctgt aacacaacgt
    48841 ccatcgcttc gcgttcttcc ctgacgaatg cgtcaccgtc gcccccgttc tcactcccga
    48901 cggcatacag gcgcttcatt tcactgcctg ccagcgccat cactttttcc agcatcaccg
    48961 ccgggactgt cacctgacgg ctgacgcgct tttcttccat cagttcacga acaacgtcgt
    49021 gaacaacgct gacatccgca ccatgctcaa aggcatcgtc cagccgctgc atgacggttt
    49081 ccagctcatc gtctggcagg ttccagtcct gggctatgtg acgcacatcc ccacgggtca
    49141 gcaccacggc aaaaacgcat tcactgtccg gcacgtctgt atccagcact tcgcggataa
    49201 tttctttaac agtacagtac attttctcgt ctcctttaca ggggcggcat tgccgccccg
    49261 tccgttaatc agtccagagc cgcgtaaatc gcgttgcatt cagggtgaaa ttcgatgtga
    49321 cgccacaact gcgcatcgcg catccggtaa agctgggtca gtcctgcatc accgctgtcg
    49381 tggtacagcc acaactggcg gttaatcaca agggaagtca gaatgatgcc tgcggcatca
    49441 gcactcacgg tacggtcaaa ccagtttgca ccgttcacca tgtggaaacg gtcgccatcc
    49501 ggcatcatgt aaccgccacc gtccggcagg cggatgaagt gccagaagcc tccctgatat
    49561 tccggcatca ttttttgcgc cagcgcgtac acatacgcct cggcatacag aaaatcgttg
    49621 ccaaacagat acggtagaaa ggagagacgg tcgcactctt caacgttcag agtgacaggt
    49681 ttcgcatatt gcatgatgtt ttcctccgtt gttcacatat tccgcgacac cgggcggtgc
    49741 cgtgcctcca taaaagccgg gcgataaggc ggggatgcac agggcgcaag ggaagccgca
    49801 gcctgacgca cacggctggc gggagttgga gggtgagacc gcgaaatctg agcgggtgaa
    49861 cgaccggaaa atcacggcag acgggaagga gggaccgggt gaccgcagcg gcgaagcgta
    49921 cccttgcatc cctgccagcc cggctaagat ggaggcacgg cacagcccgc acacgacgct
    49981 gaggccacat aactgaaaaa ccacaaggcc atgccctgca tggccgggta aagcggagcc
    50041 ggcggcgact tcctttgtgc tctgtccggg gaccggcagg aaaaaggcgg ggatttaccc
    50101 cgccagtgtc atcatttccg gatttttgcc agggcatcag ccatgctgcg gatttcggcc
    50161 cgggcttccc ggaccacctc ccgcagaaca ccacggtcaa accagcggcg gggcggttca
    50221 tccggtatac gcagcacatc gcaggccagc ccactggaca ggatatgctc aatacaatcg
    50281 ctgaccaggt acatttccac cgacgaaaaa cgtgctcccc ggttcacgat ggcatcgagc
    50341 accacgggca ggttttcgtc atcttcatcg agccagcagg ggtgatcgct ttccttcacg
    50401 accaggcgaa agcggcgcgt ctggcgggtc agcaacgtct gaccggtggt ggtcagcgcc
    50461 gcacggatac gccgcgcatc ttctgccacc tggtaacaga tgcttcgtac cgcatcgtgc
    50521 accgcatcaa gaacagccct gatttcgtct tcggtcagcc attctccggc atacgggaaa
    50581 gacacctgcg ttccgtctgc cggaagtacc ggcagcgact gccactgact gccggacagt
    50641 accagttccg ccccggttcc ggtcagtctc tgaatggcgg aggccaggag cggcggcagt
    50701 acgccgccgt gacggttgat aagtaacgtc gccagccggg gcgcatccag ccgcacgtaa
    50761 atgctgatcc agcccggata gttcggattt cgctggtcaa catccgtctc ttccggccag
    50821 ccctgcgcca gcagcaggtt acgggcgtga cgacaaacca gtgcattcag cgttttgttc
    50881 atgattaagc gttctccctg tatcgccgcc cgcagggcag gcggcgataa catcagttgt
    50941 tttcgtgtgt gttgtttttc agcagggtgc gggcctgatt aatcactgcc tgacggcggg
    51001 taacacattc cgggacggca aggccgttat cacgggcggc ccattcacgt ttccacagtg
    51061 cctgttcagc ggtctgaatc agggacgcca gcagttcagc agggacggtc acctggcggt
    51121 tttctctcac gttgctgata atctccatcg ccacgccgga agaaataccg gactcaatcc
    51181 gctggtcttc cgggatgtcc tccaggcgcg ccaggacggt cctgatttca tgatcggaca
    51241 gggaaatatc cattccgtca gcgagggcct gaatctcttc aggggaccag acaaccagca
    51301 tcagtggcgt gtctgccgga tactttgctg ccagctcccg gcagagtatt tcgcatgttc
    51361 cgtacatact ctctcccctc aatctttgaa gcaggaatcc agttccagaa tttcggtata
    51421 tgcctccatc aggaggcggt ttgcgcgaaa caacgtctga cgcaccagac gttccggcag
    51481 ggtgtcagca ttaaagctgt accgccgctc catctcattc atggttgtac gcaggtcgca
    51541 catggcattg gccacctccg ccacttcggc gcgaagtttt tcatgtccgg catagttcat
    51601 ttacgcagcc tccggcataa accagtcatc atttgcggcc ccctgctgca tggcccgctg
    51661 tacggcagcc agacgttgct gtccggcacg gtgatactgc tcaagcagct cgataccgat
    51721 ataccggcgt ccggactgaa gggcagccac gcaggttgag ccgctgcctg caaacgggtc
    51781 cagcacaatc gcgttcggat gtgtgaagct ctcaatcagt ggttgcaggc tggtaacagg
    51841 cttttccgtc gggtgatgac gattgcctga atatttccag cccagcacgt cgggtaatgg
    51901 cttctgaggc agcgccggac ggccttttgc cagaacgtag gcgcattcgt ggcgataacc
    51961 cacatatgcg gccttcgatg tgtagttttt ggtgaagacc aggtgcccaa ccacactgaa
    52021 tcccgcattt ttccaggcgg ccataaagcg atcgacgcgg ttccagccgt agaagctgac
    52081 catcagcgca tcttttttga gtacgcgata catttcatta caggctggtt gcagccattc
    52141 atcggtttta tcgccggcga tggtacgccc ctgtcggtca cgaaaaccga cgaggtatgg
    52201 cgggtcagtc agtatgaaat caatgccgtt atcaggaata cgcgccataa catcaatgca
    52261 gttaccgagg acaaaacggg acataacaac actccttctt tctcagaggg caccgggagg
    52321 gcacccctgt ggtgcccgtt ccccgctgcc tgtgggctgt tcaccgcgtc cggtaacggg
    52381 tcaggccgac cgtggaatat cgcagccgtc gtctttttga cggcgagaat atgccgcgaa
    52441 agcggcttga agggcgttca tcagaaaagg gcgacaggct ggcgtacact gtcaccgacg
    52501 ccagccggga gcggtaaaag cgcccgtccc gtgcccgccg gacgcgggac actgaccaca
    52561 ggcagcgttt atgccgcgcc gcatcagccg gcgcagtaaa cagaggagca cggcgacatc
    52621 ctttgtcgga aaagaaacgg gcggttgccc gcccgtctcc gtcatacttc atcccccgta
    52681 atgcgccacc ttgtcgacta tccacgcagg tccggtgact tccggcagct catcgtcatc
    52741 tgtcggggaa gaccattcca gttcccccca gagcacatca acgagctctc cgcgctcata
    52801 caactgccag ccacagaaat tgcagccctg ttcggcgtac cagtgctcca gcgtgcagcc
    52861 gaaacggcgg cttaatgctg caacaacgtc gctttccggc tgacaccacg gcgtgtcgaa
    52921 atccacctga atgcagttgt ctccctgact actgatattc aggtcatacc cacaaggcca
    52981 cttcacgcca taccgttctg tataccagtg atatgcagaa ggaacaccgt tcagaacacc
    53041 accattaaag ccattcactt caacatccag gcgggtcggc agaaccgtca gcaggtcaaa
    53101 cggcatggtt ttttccggca ctacgttgtc acacagacgg ttccaccaca ccgatacatc
    53161 ctcgctaccc cagatgtcac accagtcacc tctttttgcg gtgaaatgca cagtgatggt
    53221 ttccctgaca tcatccggta atccttccca gcgacgctgt ccagtaccac tctgcagcca
    53281 gagttcatgc agcatcaggc agttttgctc atccagcagt acaccgttct gcaggtgtgt
    53341 cagccagcgg gtgaacgcga tattttccgt cgatacagca ccacgtccgg cagccgtcac
    53401 tccggggcac tgttcagagc ggatattttc agtgatctgc agaagtccgg cacttccggc
    53461 cagaaacagc tgaatacctt catttgtggc gcggcgataa agcggtgtaa ctgcaccgct
    53521 ggccagtcgt ttaatctcag cgatctgtgc cggttcacca gaaaaataca tacgattcga
    53581 gcaccagttt ggcatgggaa ttctcctctc acatgcggcc tccatcaggc cgtgccgcac
    53641 ctgttaccgg gcgaccgcat acgaatgcag gtgcggcccc gaagccgcag cgcgtggagg
    53701 aggaacgacg aaacgtgacc gggtgaggag gccggcgaca gcgacacact tgcatcggat
    53761 gcagcccggt taacgtgccg gcacggcctg ggtaaccagg tattttgtcc acagaaccgt
    53821 gcacaaaatg ctgtggataa gctggacaca gcagcccaca gcaggcatac agccacacac
    53881 tcagagaatt gagcgttttt tagtcacaac aatgacattt gactgtgtgc ggattcagtt
    53941 attagaatac tgtatataca tacagcaaaa gaaaagggag atgagaacat gatccgcatt
    54001 gaaattcttt tcgaccgcca gagcacaaaa aacctcaaat caggcacact tcaggcgcta
    54061 cagaatgaaa tcgaacaacg tctgaaacca cactacccgg aaatctggct gcgtatagac
    54121 cagggcagcg ccccgtctgt atctgtcaca ggagcccgca acgacaagga taaagaacgt
    54181 atcctgtctc tgctggaaga aatctggcag gacgacagct ggctgcctgc agcatgagta
    54241 ccgtttatca ccgtccggct gacccttcag gcgatgacag ttacgtgcga ccgttgtttg
    54301 ccgatcgttg ccaggccggt tttccttcgc ctgccactga ttatgctgag caggaactgg
    54361 atctgaacag ctattgcatc agcagacctg cagccacctt ctttctgcgc gccagcggtg
    54421 aatcgatgaa ccaggctggc gtgcagaatg gtgatctgct ggtagtggac agggccgaaa
    54481 aaccacaaca cggggacatc gttatcgctg agatcgacgg tgagttcacc gtcaaacgac
    54541 tgctgttgcg cccacgcccg gcactggagc cggtttcaga cagcccggag ttccgcacac
    54601 tgtatccgga aaacatctgt atttttggtg ttgtcactca cgtgatacac aggacgcggg
    54661 agttacgctg atgtttgcac tggctgatat caacagtttc tacgcctcat gtgaaaaagt
    54721 tttccgcccg gaccttcgca acgaaccggt catcgtactc agcaataacg atggctgtgt
    54781 gatcgcgcgc agcccggagg caaaagccct tggcatcaga atggggcagc cctggtttca
    54841 ggtgagacaa atgcgcctgg agaagaaaat acatgtattt tccagcaatt atgcgctgta
    54901 ccacagcatg agccaacggg ttatggctgt tctggagtcg ctttctcccg cagttgagcc
    54961 ctactcaatt gatgaaatgt tcattgattt gcgggggata aatcattgca tctctccgga
    55021 gttttttggt catcagctca gggaacaggt aaagagctgg acaggactca ccatgggggt
    55081 gggcattgcg cctacaaaaa cgctggctaa aagtgcacag tgggcaacaa agcaatggcc
    55141 acagttttcc ggagtggtcg cgctgacggc agaaaaccgt aatcggatct tgaagctact
    55201 ggggctgcag ccagttggtg aggtctgggg agtaggacac agactgacgg aaaagctgaa
    55261 tgcgctgggt attaacacag cactgcagct ggcgcagact aacacggcat tcatccggaa
    55321 aaacttcagc gtcattcttg agcgtacggt acgcgaactc aacggcgagt cctgcatatc
    55381 cctggaagaa gcaccaccgg caaaacagca gattgtctgt agtcgcagtt ttggtgaacg
    55441 aatcacagac aaagatgcca tgcaccaggc tgttgttcag tatgcagagc gggccgcaga
    55501 gaaactacgt ggggagcgtc agtattgccg gcaggtgacg acatttgtac ggacatcacc
    55561 ctttgcagta aaagaaccct gttacagcaa tgccgctgtg gaaaagcttc cattgcccac
    55621 acaggacagc cgggacatta ttgccgccgc atgcagagcc ttaaaccatg tctggcgtga
    55681 agggtaccgc tatatgaagg caggtgtcat gctggctgat ttcacaccat cgggtatagc
    55741 gcagccggga ttatttgatg aaatccagcc ccgtaaaaac agtgaaaagt taatgaaaac
    55801 actcgatgaa ctgaaccagt cgggaaaagg gaaagtgtgg tttgcggggc gaggaaccgc
    55861 ccctgaatgg caaatgaaac gggaaatgtt gagtcagtgt tatacaacta aatggcgaga
    55921 tattcccctg gccaggctgg gttagttcag tcatctccga acatattttc agcgtttctt
    55981 ctggtctggt cttcaccgtc atttctcgac agactctgct ctgtaagagg agtactgcaa
    56041 tccacagacg tatggagacc agattgtttt tccagtaatt caagcaattt cttttcaacc
    56101 gaaaaagcac ctggtattac gctggaaatc accttattaa tatcatccag agtcgtattt
    56161 tctgtcagta actccgatat cagcaaagga agacgtttat ctatagctgc aaacgccgca
    56221 ccagtaacta acatcgcgcg catgaaacgt ccccgctcct tcagtttttc atttgcaatg
    56281 agctcatctg ctatcttatc tcctgtccgt tcatccggga aaagttcaaa tgagcagcgt
    56341 ctggatttat tttcatcact cattagtcac accacctttc atttttatca ttcccatgac
    56401 taaatcaaac tgcggggatg agctcagata aaagcgctca tcaggaacct tagtcaggtt
    56461 cttcacagcc tcggccacaa tttcagcccc accaccaaca cacattacat gtgtatagtc
    56521 ggtgaaacgg ctgatgacat cattaactcg tttaataagc aacttctgcc gttcattgat
    56581 aacattaatg atagactcac gctgttcagc attataaatg cgacgggaaa ggtagtcagg
    56641 ttcattacgg tgcacaatga tattgtcagc ctggaatgag ctcactcttg tattagcatg
    56701 tacagccatc tgttccttaa ccccggatgt aatcagggac acgccgatat tcggatcaca
    56761 ccaggttttt gtaatccctg tcattttgct acgaacatgc gacacatcaa gagttgtacc
    56821 accgagatct acgatcaaaa gggattcatc atcctcaagc cccgcaagaa cactgaaacc
    56881 agcgggaata ctttcaggaa gaacggaaac actgcgaata acaaatgcat cactcccctg
    56941 cacccgtact tcacgcatca catttttttt ctttctttca atgttttgct tatttttctg
    57001 attgttggcg tcaaggtatt cagagatcgg caatgtgacg atgacatcaa caggctgcgc
    57061 tttcaggccg gtctgctgta gcgcatgctg aatggccaca acattcacat cactgtactg
    57121 atagcgtgtt tcagtcgtta cgacagcatc agcacttaat ggatcaaatg aaaacttctc
    57181 gccgtcgatc tcgtaattag ccggagcagc atcatccagt aaactaaaag accattccgg
    57241 tttaaagctg ttagggctga ttaacgtttt cacgtcacca tcctccaacc aggcaagttt
    57301 aatgttggta gaaccatcat caataaagat tttcataacc agtctccgtt gctcataaac
    57361 aaatagaaaa aacaaacata cttcatacat gcaatgtata ttcaattata atgaaaaaac
    57421 ggtctttttg aaaggacaaa tgcaacataa aaacacgata aattgcatgt acattgtaca
    57481 cacaacttta agaccagagg aaatcataga tacaaaaaca ttatgaaggt tatatgtgat
    57541 acataaatgc aatataaaaa catcgtggac atcatggttc aggttaaggg aaaaggaatg
    57601 aaatggtgaa actgagagga aaggaaagcg gtgacgaatc atgtcaccat aaacagaaag
    57661 atgtctaatg gggactcttt aggtacgtga agaatcccca taacgcattt aaaagacaca
    57721 catcagatac ccttaaggta tccgatagtt tattgaccta ttgcaccatc acgttcaagc
    57781 ttctctctta tagcctcaat aatatatgag ctaaaatcca gagatgtttt actggtcgct
    57841 ttaagttccg catgagcttc aaaatacgac agcggtatgg ccttaagatt cttagccttc
    57901 gtcctggcag ccacgggacg acctgaaact tcctctgcac cttcatttgg ctgagacggg
    57961 gctgttgctg ttacggcaga agaagaagtt tgtaatctgg cagaatccac caggtttttc
    58021 agtttttcag cctgtgcact aaatttcgct ttgctcatga gataacccag gatgtttgtt
    58081 agatacttaa aagatatcca ttaaaagccc aaaggatact atatggatac ccaatagaca
    58141 caccttactg tttgttattt tcaatcagat gattgatttc ttcgatcagg gcaataactt
    58201 ccttacctcc tgccgaatag cgcccatgaa cagactcagt gattcccatc ccagtctcaa
    58261 tgacatcctc aaattctgca cgagcagaaa tgcggctctt catcagcttc agatgtttga
    58321 acgatggcag gattgcatca agcttaggga atttcttctt gttaggatta actttacaga
    58381 gatacaggtg agcagttata tcggtcccca tgatagagct gatttcgtcc agtactccat
    58441 caaaatgcat caaaccaata cgttcagtca gggagtcttt tgaaggaaca ataacgcagt
    58501 ctgcaaaggc aatcgcagta cgggtaagat ctgagtcaaa tcccccacag tcaataagta
    58561 acgtcttatc gctgttcttg tagggagtca taatttcgat taactcatcc actgttttgg
    58621 gtactttcac ggaaatttct tttccttcag gtctcagccc cagaatgata gaaagcccgg
    58681 tatgagtatc cagatcaact gtatcagact tcatttcacc aacaatgttt acggatgaag
    58741 ttgtcttacc cacaccacct ttgggatgcg tattagcaat aacaggcata gtgtatctcc
    58801 agaatccaca tgtaataccc ataaagaccc cataagacac ctttcggata tccaagaggt
    58861 actcaataga tgttttttta ctctataccg gtcctgcatg tcaacagaat atgaaatacc
    58921 gataatatat ccatgagata tccgaaaggg atttaaaaaa gtcagagctt atggaattct
    58981 tttgagcata gacaccgcat cggactcagg catcgaaaac tgcacccggt gccgtgcagc
    59041 cacatccagt gcaaacacct tcgtgtagac ctccgttgag ctgatggact tatgccccat
    59101 cagactctgc aggaccttca gcggtatacc ggcatacagc atatgcatcg cataggaatg
    59161 gcggaacgta tgtggcgtga ccgggacaga gaacgtcact ccatcagcgg cagcggcggc
    59221 aaccgcctcc ccaatccagg tcctgaccgt tctgtccgtc acttcccaga tccgcgcttt
    59281 ctctgtcctg cctgttcgtt tattacgccg ttccatgggg attttcagtg tggccaccat
    59341 cgtctgcagc tggctgacgt accaggcgtc ggagagcgga accagccggt gagtctgctg
    59401 accggcgggc atccttcctg ccgtcctggc ggctttttcg gtccgctgct tcagagtggc
    59461 cagctgcaca aacggatacg gaggcgtgag cgaaaaatcc ccccgcgtca gcgccagtgc
    59521 ttcattaatg cgtgcaccgg tgttccacag tgtggccagc agcatcttgc ggcgcagatc
    59581 cgggacgtaa tggagcaggg cgctcacttc aggggccagc aggtattttg gcagttcatc
    59641 atgaaccatc gacatctggc ggagtgccag cgctgccgga taatcgatgg caacaggaag
    59701 ctgagcggca tcccgggcat ggtgtatcgg tgccggcagg tgctgcatat cagtgttcac
    59761 tccacgggga aacgtcgggc aggttttcca caacacggta ctttcccgga taacggagct
    59821 ggttaccgcc acgcgtccag acggtgacaa caaaaccccc gccctggttg ttttcgggga
    59881 gcaggcgatc gcactgctca ctcagcatgt ggatcacaaa cggcgcatcg ctgccgtctt
    59941 caaataccag ttccagcgca tcgcggccat gcagcgttcc cttactgatg atgacgtact
    60001 cagccccccg catctccctg agtaaatgtt ttgccgcatc cgggacaagc agcctggctg
    60061 cgccggcatt ccagctgagg tagacatatc cggcctgcgc ctgtacagac tgccagtaat
    60121 ccgttccggc gacagcctga ccttcattct caataaaaaa catgggtgac tccttttttc
    60181 ttttccgggc agggacggtc atgcgataac gtcatccatc atcactgccc ttaccgtcac
    60241 gccgtctgat aacatcatgc cgttatcatc atcaccatga taacaagcat ccatataacc
    60301 acgccgttaa attaccggag agccgtttcc gtcagatccg actttccgga atatcacaac
    60361 tttccggaag tgtaccacgc tgaggaaata atcatatcgc tgttttccgc ccctgcgcgg
    60421 cgcatcacag gtcagggaga tgacacaaca tatagtgtca agagcagctg aattcagcac
    60481 tacatgttgt gcttacaggg tgtggcgctg tgcggagggg gaggaagatc cgtaacctgg
    60541 ggttttcgga tctcagaaaa ggaagtgaac agaaaacaga cagcgaagca tacgaattat
    60601 aaaaacgtat gcttcgcagt atttaaagac actcaaaacc aggatagagt ataagtattg
    60661 cagcaatgcc ccctcacatg aaaaggtacg cgggatgagt gaaaaagaac atgacatgac
    60721 aaacgacggt ggagagagcg taacgtatac cctgcggaac atccccgctg acaccgaccg
    60781 ggtgatcacc gacctggcaa gccacgcccg taagccaaag gcgacgtttc tgcgtgagtt
    60841 cctggaagac agcttccgcg acgtcatcga cagctttgcc ctgaagaacc cgctcatcgc
    60901 ctccctggat gaggagctgg ccagttatct ggacgctaag gtcatggagc agcgctacca
    60961 gagccatttt atcacccgct ggaatcagga ataccagaag ctgctgggga tctcgacgga
    61021 agaggagctc cgccggttgg tactgaacaa cacccccttc ctgcaggtcc gtgccgacca
    61081 ggtgcttaag gggtggaaaa atatcccgcg cgggatctcc ctgaccttct ccctgtttgc
    61141 cgagatcgcc ggccgggaca gggaaaccat cgaccaggcc tggaaaaata tcttctactc
    61201 gcaactgagg gaaaaaaaac accgctttta ccaagatatc gaggccatcc gcgccctgaa
    61261 aaaactgcct gccctcaccg gcgacagctg gacgcgggat ggcatcacgg tgcgtatcta
    61321 ccgcccggaa aattacgccc gcggcgcatg gcgcgttaca ctgagcctcc cggaaaatta
    61381 cgccacccag atgtggaaca tcccgttccc ggagcttgaa taccgcctct ttaccgccga
    61441 tccgggctac agcgccctga tcagcgccga acccgacagg tgggacaagg ccttccgttt
    61501 tgtggacggg gtgtgtgagc ttcaccttta caccaacggt gtggaagaag atcacaatcc
    61561 caccccgctc ggggatgtcg ctcaggcgct gatcaacgtg gtggaagaaa acctgctgta
    61621 acggacccgg atctgcgggc acaactgcat catcaggagg atgcaatgaa aggacgacag
    61681 agccgctatg ttaccggcgg agagagtttc gcggagattg cccgtctccc ttcaggggcg
    61741 gtggtgaggc tctgtctgaa caccggtctt gaggatgcgc tgcgggaggc ctccaaatcg
    61801 ctcaagtcag ccttcacccg ttccgggcga aaatgccggc tgtcagcggg tacggcgcag
    61861 gggccgttta ccggacgccg gcagggcgtg gccacacatc tcttcgtctc ggtactctga
    61921 gggggcaggg ggcaaaaaaa gtaaaaatgt attcgccagg ttgcccggag gtgaaggaaa
    61981 atagacatac agcagaacga cggatagcac tttttgctaa atggacatca gtattactat
    62041 gctatagttg ctttaatgga taagtgcgcc ttggcaaagg cggtgatttc tgttaacatt
    62101 actctcatag tattgttccg tcccgctcca ccccaacaag atccgtttat ttcccgccag
    62161 actggttatc accattcagg cccggatttt tttggatttt tttccgggga gcccccggaa
    62221 cgagcttaaa atcggtatga caaacaggag gatgcgaatg aacacatcat aacagagctg
    62281 aaagataaaa cattctgtac ggcattaaca gcgttcacgt gtgtgaggcg ccgggtgcct
    62341 tttgacttaa aaacgaggtt attgagatga ccaaaatcaa gacagttact tttgtaaata
    62401 cttacccggg agggttctat gaaaaacttg ttagacaccg agggaacggt tctattccca
    62461 ttccagactg aaatccattt tatttggacg attttctcca ccgttaaacg cctggttatc
    62521 ggaaccaggg accatatttg ccagaagcaa tactggagcg cctgtctctg tattttgctt
    62581 cttatggcct atgtgggtct ctgtgctgcg gtggtctggt ttgtagtgcc ctggctgaag
    62641 gcctttatag tgtcgaaatt tgcggtttcg gcactatggg tcacgccagt aaagcgcgga
    62701 ctactctggg gtatcggtaa agtggttacc gccacttgcc gaagatttac tctgctaaag
    62761 taagtagccg caacgctaca cgaactgatg gtgaatgtca acagatactc accatctcct
    62821 tacggcggtg gtccctgtga ccactgccgc tttcgcgtgg gtgcaacacg gcaaaactcc
    62881 tctgtacaac aggggctccc gccgtcattt tccggcacag gtgaggccgg aattcggact
    62941 aaaacgtaaa ccgcgggcca gtccggtagc gttcactatc ggccagcatt ctctcaacca
    63001 gagagaaatc cttttcaccg cagaacacgt actgctccgc gaactccacc tgcagggaat
    63061 tgtaatgcgt gacatgctcc ggggtaagcg gcataagaag atagtccgta tacctccgga
    63121 tatgttccag tctttcaaaa ggccgaatgt gacgggggat aagatgcggc gccctggcga
    63181 gcagatgttg aagatgctgc ttttgacgaa ccatctgttc acggatggag gggcaataca
    63241 tggccagcat cagcgtcgat gacaggggga ggtaaatctg tatcccgcga acggccagac
    63301 caagattacc gtacggaccg aagtcattgc tgttcttaag cactacggga ttgtctgata
    63361 cgtaaaacgg acgttctggc ctggtttcca gaaggtacca gtcctttttc agcaggagat
    63421 caatatgtga cacctgctgg acgagctgcc gcagaaaaat atccttggta tcgcccccgg
    63481 acgacaggcc cagggtttcc atggcctgct ctttagtcga gccgatggcc tccatcttat
    63541 cggtaagcac cgaaatcatg cctgagatac gctccagttc accgaaggtt cgtgcgcgct
    63601 gcacggcaac aaacacggcc agcctgtagc gttcatcatc tgtcagcctg cgaatatccc
    63661 tgtgcgccag cagggctgca attaccggtg ccgcgtggtg ctcgtaaatc cccagcagtg
    63721 gttcaagact cagacggtcc gggtgattat cgaggttgta gaacgtgttg cggacggtcg
    63781 cgtcatccgg cgtggtggca taggcgcgcc cggcagcctt gtcaaaggcg tataagcgct
    63841 gccgcttacc ctttcccggc gtactgaaat gcttcagtaa aaaacgggga accgtatgct
    63901 gcctgaccac atcggtctgc agattgaatg gatcggccat aactttatct ccctgaaaag
    63961 ccacgcaagc gcatcggtgc atctgtattg acggcatggg cagctggttt gcagcttagc
    64021 attagaaaac agaaccgttc gataatacct gtgtttaacg ccctgtcagt accgatggaa
    64081 tttaaatctc cggaaccgcc ggaaaccgga tctgcacgac gggaaacggg caactgatat
    64141 gataatttag caatacacat aaaatcatat cagatatgat tttcatcatt ataaatgaaa
    64201 caatatctga tattatcaga aactaagaat acataaatca tacatgacat gatttttacc
    64261 tgtcagaaca ttatcagatg gagcgtgcag gatggatgaa gaaagggtgt tttcactcag
    64321 ctatgagcaa ctaacccgaa tagcggaaaa aaatatccgt gaatgtgggc tggacaacca
    64381 gagcgccagg tgtattagtg aattgaaggc ctcagctctg ctgtggttgt ggtatgaact
    64441 ggccattcat ggtgcgccac agaacaatca cgcacaggcc cgggaacgca tcgataccga
    64501 ttatcagcgc ctcaaaaaac tcatctggtc ggagggtgac agttaatgac tcagagccgc
    64561 cgaccgtcgc cactgcagcg gagagtgctg attgtgctgg ctgcccttga tgaaaaacgg
    64621 ccgggacccg tgctgacgcg ggacatagaa cgggtgctgg agcgaagcgg ggaagccccg
    64681 gtctacgggc caaacctgcg cgcctcctgc cgtcgtctgg aggatgccgg ctggcttcgt
    64741 accctgcgcg ctccgaacct gcagctggca gtggagctga cggacgccgg ccgggccgtg
    64801 gcacagcctc tgctgctggc agaacaggac cgcctccggg cagaacagcg tgcggcagaa
    64861 gtcgtcgtac tgccgctggt cccggcagca ggtctgcccg cagacggcac ttctgccact
    64921 gatctggcgg tagagctgaa cggcataacg tatcaggcct gccgtgggga ttttgtggtg
    64981 cgtctcgacg gcagcacctg tctgcagtta tggaataaag aaggcagggt ggtatgcctg
    65041 gagggcgatc cgctggaagt ggcgcagtgg ctgcaggcct gtcatgacgc aggaatagag
    65101 gttcgcgtac agataaatga aagtagcgtc ccgtaaaaac atgcctgcat ggtttacacg
    65161 tcatcccatg gtggcagccg gttaactttc ctgcgccacc agtggaaaga ggccgtgagc
    65221 agtccgaaca aaaaaccacc cgtgatactt ataataatgg cctcacctgc caccattcct
    65281 gacggccccc agtagataaa ccacattgca catccccagg aagtgcccca taagcccccc
    65341 gtcagcaccg cgacctgcca gaacggcata aagggtaatg gcggaagccg gatacccagc
    65401 cgccagagaa tacgcagaag aggaggggca taattgctcc gccacatctt tttgctgtcc
    65461 atcagggcaa tggcccgggc ttttttctgc tcaaaggtca caggagcacc tccgttccat
    65521 gatgtaaacg tgacacagct tattgttatt gattattatt atcatgctgt gattatgtta
    65581 tcacgcaccg gtacacgata acaataaagg agaaaccaga tgaaactgga tatatctgta
    65641 aagtatttac tgaaaagcct gataccaatc ctcattattc ttacagtttt ttatctggga
    65701 tggaaagata accaggaaaa tgcaagaatg ttttatgcgt tcatcggatg cattatcagt
    65761 gccattactt ttcctttttc aatgaggata atacagaaaa tggtaataag gtttacaggg
    65821 aaagaattct ggcaaaaaga cttctttaca aatccagttg gcggaagctt aactgcaata
    65881 tttgaattat tctgtttcgt tatatcagtt cctgtggttg ccatttactt aatttttata
    65941 ctctgcaaag ccctttcagg aaaatgaaag ggcatcatta tgtgtcagat accaataagt
    66001 ttattgacct gctcaataaa cttatcatta acaagcgcac tcacagccgc cataataatt
    66061 gcaaaaccca gaatacctac aggggttccc agcatgacgg aaaacgccca tgctgtaact
    66121 gctgaagcag ctcttcctgc tgccagtgat tcaagtttta caaaaaatgg acgccagttg
    66181 tccgttttta cagccttttg taactccaca gcaacatcat aacgatcaat aacttttccg
    66241 gtaaaaccaa atgccttact gaacagctta aaattctccg ccatatggac ctgattaata
    66301 gcttccaggg ctttagaaat ggccatgcga tcttgtatgt tatatttctt gttcagatta
    66361 ttacggaatt tatcaaaagc gttcagtgca tcatccacac tcttaatctg tttcccttga
    66421 gatacagaag ccagctcctt agcaagttcg gatgcttgtt taccgaactc atcatatatc
    66481 gttctgtaga aatcagaggt gagttttatg gcatccttta ccatatttat ttcatccctt
    66541 tttcttttct cttcagctat tttctgattg atgtcagcaa gctggctacg gatattctct
    66601 ttttccttca acagggcatt aagagcgtca tttgcatgct tttgttcatt tgttctggca
    66661 ctgacgttat ttctcgccga atttatcgca gattcagcag aggtgatttt atttctggca
    66721 tcaagcaatc gttgccgtaa cttatcccat tcagcaactt cagcattata aattttcttg
    66781 tcaccttcca catcctctgt caccaccgga ttccggtcat tcagaatatt gcgtttatag
    66841 tccagaccgg aatgggtcag aagataattc aggtttgcac ggttatcgat gaccgcgctg
    66901 gttgtgattt ttatcgtacc ggcaaacctc ggatcaccac tcacaacaat agaatgattt
    66961 gttgatgaac gccccgggaa tttttcaggg gaaactatcg ttttgccgtc aggcgtgttt
    67021 ttctgttgcg tcagctgttg ttcagctctg gttaatgcat tacgggccgt cttaagcgat
    67081 tccgtcaccg aactgagttt attccgggcc tctgaaatgg ccctgtcatt ccgtgtctgc
    67141 tgcccgagca gacgggcctg ttgtgcatca agaacggcaa gggctgcccc gccatttttt
    67201 tccagctctg acaaccgcgt gtccagaata ccttttctgc gctcgtattc agcaagcata
    67261 tcagcggcct tcttgtctgc gttctgcgca tccttctgcc gtttttcagc ctgttcgatt
    67321 aacgacctgg cctcgcgggg agatatacga agagaatcag catcagcaaa cagcatccgg
    67381 ctctctgtat gcagccggag ggcatcatat ccggcgattt cagtacggaa tccgtattct
    67441 ctcagctctg cctgcaggag tctgaactcc tgtcgtgtaa tatcagcggc atctgcgttt
    67501 ccggcacgga gtgttttcag tgtgttttca tctttttccc ttgcagcaat tgccgcagaa
    67561 aggcgttttc cagcttcagt acgcttattc tcattctctt tctgctgcgc gctgagcgtg
    67621 tttttgtacg ctgtgatttc cttgtccctt ttttcgatat cacttcgggt tggggaatca
    67681 tcgacccact cgtttccacc ccagatggtt ttgttcccga aggaactcca tgcaggcggg
    67741 gtaccatgaa agacatcgac acgtggaggg tttacataaa tatcaacggc cataatttca
    67801 tggccatctg aatcatatcc cagcgattct gcaccgggat ttgtaatacg tacagggtca
    67861 gacattcggt atctccttca tcctctgagg aaaacaaatg aattaactgc ttacgtatat
    67921 ggatacatat acagtactaa tttattaagg agaaaatggc atgtcaagat ttaatgatag
    67981 taattatcat taacatgaag tggtgttata ccgttcagaa agcctgctga cactgtggca
    68041 gcatcacagt ctgggtattc tctggtgcaa tacaaaaacc ggactttccc gtaacaacag
    68101 acaatgttac gggaaaagtt acagaactga gccacaaaat atctcagtac ctgagatgca
    68161 taaaaacacc gtacatatgt ttcttaaaag ggggatgatc gttatccagc catttcggtg
    68221 gatcggtatg cagaacacca atctgcttca tgccggtatg ctgcctggat tttctcgcgc
    68281 agtaatcact gtcttcatat cccatcgttt cgatgaccac tctggccgtc tttccgtcag
    68341 gagcccttgc tgtgacaatg aaatccggca gtacatattt cttttcacca ttaacataaa
    68401 cttctgtatc aaacaggggc ctttccagac ttaattccgg cgtacctggc tttcttttaa
    68461 gccagctggc cacattcaga agagcagtga gcgtgtttcg ttccagtttg ctgtccacag
    68521 gcaccggaca tgtcagttga taaagagcat gagcataccc ttcactgcag atgattctgc
    68581 catcggcact ccggcaaaaa gcaagaataa cccagtaagg gggacgtatt ccgccctgcg
    68641 cttcaccatt aatactgatc ccccgcacag gtctgatgac ctgaatatta ccgttcgccc
    68701 agtgaatttc cacagcatca cgacagatgt gctgcgccat aaaaatctga aagaacatat
    68761 gctttcttct ggcaggccag tgtcgttctg aattctccag cgtttccatt aaccgctcct
    68821 gagacctttc agacattcct ggccggaaat ggataatttc agataaggct cttccccgaa
    68881 tatactcctg ctgtagtgta acctgccgta tggcatcaag acactcacga taattagtcc
    68941 ggatacgggg attagccagg gaatccagtt tattcagccc tgcatcttca ataagcgaca
    69001 ggagtaaacg gccaaggcgc ggacgtttct tgcgaacgga ggagcgctca ccattatggt
    69061 aagcagagcg ggcctgcagt ctgataacag aattactgtc atcaggtggt aaaaagtttc
    69121 tgtaatttat acgggtgcta acgggatgcc ggcttgctcc gaaggatgtt tcctcttcat
    69181 ttccggataa ctgacgatac atggggcatt caggtgcatg ctcatgatta aaactggaca
    69241 gataaagagt acccgtattg tttttaagag cagcaaaatt catggccggc gaatctcccg
    69301 gaatacagtc acactgtaac catgcatcat actcacgcat ttcccggaga agatcattgg
    69361 ccaggttatg ttgtgccatg gttgctggcc ttttcagtcc acagaccgtc tttactgcag
    69421 tctcttcctc actgctaagc tcccgaatca ctttgccccg gggattcttc tttacaagta
    69481 tcattggcat aatgaaagca ctccttatgt acatgcttaa acagtaagta aaatatacaa
    69541 agaacccccc atgaaacaaa ggcagagatg aactgtgcgc cccgatatct tcttctgata
    69601 tcctttcaaa tgaattgttt ttatttatat catgacaaca ttaaagtgag agaatatatc
    69661 aaccatgttt ctgtcagggt tcagtagaat atcaattcga ctgtcacgcc ataactgtaa
    69721 ctacctcgag tataaatatt cagagaatgg acttattagc catgaaaaat cacctgatgg
    69781 gaaatttact aatttatgga ttgtgatatt attaaagagt aaaaccagcc agccgaggta
    69841 tttatgggaa aaaatcagga agaaaggaaa actcccgtca ttgtggtgaa aaaacgtcgt
    69901 actttttcgc caccgtcctt atccgaaaaa acagatatta tcgcacctgt atttactgaa
    69961 cagacggcag aatcagcccc cgccggaata aattcatctg ccgtcgaaac acatatcccc
    70021 gaagcgccag ccaggaagaa gaaaaagaaa agacaccgtt ttccacgtcc ctcccactgg
    70081 acccgtgagt atactcacga gtgcgtggaa aaaataaagg ccctgtttcc tcatcttcgt
    70141 gctgaaggtg gtggatttat tcccctgaaa attggcataa gcaatgatat ttcggcattt
    70201 ctggcagaac acccggagac agaactgacc atggacgaat ggctctgtgc agtgtcctgc
    70261 atcacatccc gccgcgtata tctgcagcgg acagctgtcg ccggcgtccc acgttatggc
    70321 ctggatggtc accccaaagg gcaggtctca gactctgaag cacagagtgc cggtcgcaga
    70381 ctggcgacat tagaacaaaa gtggctcagg acgcaggcac agcaggagaa tatttctggg
    70441 caataaacac tcctgataac aggtggacat tacgtatcag aaaaaatggg aagagaatgt
    70501 tatgtgtgat tcagaagcgg agaagatttt attcatcctg aataaacatg aacgggcata
    70561 cagacgcctg atccccgtat atattttttt agctatagta ttatggattt tacctattct
    70621 cctgattgta tacctgtatt tctgtatagt tgacaatgag tttctcagaa tcggtttctg
    70681 tattgcatgg acagcatact actttctttc gcttttcaag tattttgtaa aatacttctt
    70741 tcctctcgat cgtgaagatt tgcttaacct gatggatctc gccaaagatt ctcctgatgc
    70801 gaaacaggag cttcttgagc gtcttttgtc cggaaaaaga atgaccgggc gggatgaaat
    70861 ggatatcaag cgcattctaa aaacaaagga agcacttgat aacatcagga attttattga
    70921 taaacagcag ttaacgaata gtgatactcc gaagaaaagc acggtcccaa atgaagataa
    70981 aaaaggcata agatgatgct cacaggaaat ggaataaaca ctgtaactgt caatggaaaa
    71041 gtgaaacaca tcacagaact ggatgatata acactttgtt tagagtggac aaaactacga
    71101 gaggaaaaca atcgtcttta tgaaattaat aaccaggcaa acagaggatg gcgtggtttc
    71161 atcctaagat tgataggggt taacctgcca gataaaagga ctgagtttac acaacgtctc
    71221 ttattgacgc gcaaaatttc gggttcggtc atgaaaaagt aacaaaaccg cgcaacagac
    71281 ataaatatga cagtagccat gaaaaagcag agagagacag ggtgatacag aaaagtaact
    71341 attttttagc tatagtatta ttggttttac ctatttttgt gattttattt ctgtatattt
    71401 gacaatgagt ctctcagaat cggtttctcg aagtgacgag cgatcagaat ggagacaaat
    71461 aaattcggga aacgaacctt cacggtaagt tttgtcacat ttatcatccc taaacatgag
    71521 aattatcacc aaaactaacc acccaaccaa cagcagcgcc gggagcagca ttataaaatc
    71581 atgtacagag ttgcgtgacg acatgataag ttctcattct caatatgttc tttaccagat
    71641 tataccagtg atactttaac gcaccatcat taatgctaat gtatgcatac attaacatta
    71701 atgatgaagg agaagaacaa caatggcagt caacccactt attttttgga tttcttaatt
    71761 ttcgtctgat aaagccgctt tacccgttca atttctgcca gcgttgcgga ccagtgtagt
    71821 tcggcggcat gacgatatct ggcagccatt ttttccacca tctccggatt gctgtccgcg
    71881 ctgcggtgct gacgcccctt ctccccaaaa acttcaacaa ccagccactg gcttccggtt
    71941 ctgccgaaca atgccttgca caaacgtctc acagttagcg gggttaaatc tggatcggga
    72001 tcgtaggcaa tggtagcaaa aataaagcgc agcatttctg atgtcttgta acgctttacg
    72061 ctggcagcca ggcgtgaggc acgttgcggt gcttcccagc ggtcgttact gtaattagcc
    72121 acttcagc
//
LOCUS       DADMIB010000004        66855 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.004, whole genome shotgun sequence.
ACCESSION   DADMIB010000004 DADMIB010000000
VERSION     DADMIB010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 66855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66855
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.004"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            107..1555
                     /gene="cas3"
                     /locus_tag="JNZ89_000274"
     CDS             107..1555
                     /gene="cas3"
                     /locus_tag="JNZ89_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000879013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase Cas3'"
                     /protein_id="HAY8934257.1"
                     /translation="MLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACD
                     AYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGAEGQQEAPLLGKDDY
                     PWLTHVTKTDVHSHRVATRKEVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSV
                     DDAIQVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKYCSLQRASQVIV
                     CTQVIEQSVDIDLDEMISDLAPIDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELL
                     ILAPVWDDAPGDEWFGSAMRNSAYVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESV
                     YGEDVVMPEGFARSEQEQVGKYYCDRARAKKYVLNFRLGYAANINDYLPEKLSTRLAE
                     ESVSLWLATCIDDVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCVE
                     QRQDPEMANVILVTDDESCGYSAREGLIGKVG"
     gene            1653..3215
                     /gene="casA"
                     /locus_tag="JNZ89_000275"
     CDS             1653..3215
                     /gene="casA"
                     /locus_tag="JNZ89_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse1/CasA"
                     /protein_id="HAY8934258.1"
                     /translation="MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADL
                     QGAAWQFLLGLLQTSFAPKDQRSWDDIWEDGLEAEKLREALLSLEHAFQFGPDSPSFM
                     QDFDELKVKATFIASLLPDAPGKQTKERNTDHFIKRDTTQHLCLHCVPLALFSIQLNA
                     PIGGRGYYPGLRGGGPLTTLIELLEYQGNQQTPLWRKLWLNVMPQDEADLPLPKTFDD
                     LVFPWLAPTRTSELDGAVVTDEQVNKLQAYWGMPRRIRIDFKTTSIGNCDICGRQSDA
                     LLGLMSLKNYGVQYVMWRHPLTPYRLPLKEGGDFYSVKPQPGGLIWRDWLGLIEVGNS
                     KNNTELPAQVVKLLNASNLKQTRVGLWGFGFDFEDMKVRCWYEHHFPLLLNKKEDLIP
                     KLRLAAQAASHILSLLHRALKEAWFSEKKTTKLDFGFVDIDFWNKTQHRFLRLVRKIE
                     EGQDPDELLSKWQKEMWLFARQDFDDRVFTNPYEPVDLERVMTARKKYFTTSAEKQNA
                     NAAREKKQEAAE"
     gene            3212..3766
                     /gene="casB"
                     /locus_tag="JNZ89_000276"
     CDS             3212..3766
                     /gene="casB"
                     /locus_tag="JNZ89_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse2/CasB"
                     /protein_id="HAY8934259.1"
                     /translation="MSIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGF
                     RLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMKKGRFTRLL
                     AVKTPDDLLRQLRRAVKLLNGSVNLDSLEEGVFRWCQESDDLLNHHRRQQRPTEFIRI
                     RWALGAGRWALEYYQAGDADNEQN"
     gene            3781..4859
                     /gene="cas7e"
                     /locus_tag="JNZ89_000277"
                     /pseudo
     CDS             3781..4859
                     /gene="cas7e"
                     /locus_tag="JNZ89_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311639.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas7/Cse4/CasC"
     gene            4870..5616
                     /gene="cas5e"
                     /locus_tag="JNZ89_000278"
     CDS             4870..5616
                     /gene="cas5e"
                     /locus_tag="JNZ89_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cas5/CasD"
                     /protein_id="HAY8934260.1"
                     /translation="MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGV
                     GIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPE
                     LLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPL
                     APLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDV
                     PLNRQQWLFGERTVNQGPWLSKEEPCTSQE"
     gene            5598..6248
                     /gene="cas6e"
                     /locus_tag="JNZ89_000279"
     CDS             5598..6248
                     /gene="cas6e"
                     /locus_tag="JNZ89_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas6/Cse3/CasE"
                     /protein_id="HAY8934261.1"
                     /translation="MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPSGKERQ
                     FLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKA
                     GKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDISVDAYRQQQ
                     LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA"
     gene            6245..7165
                     /gene="cas1e"
                     /locus_tag="JNZ89_000280"
     CDS             6245..7165
                     /gene="cas1e"
                     /locus_tag="JNZ89_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endonuclease Cas1"
                     /protein_id="HAY8934262.1"
                     /translation="MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHI
                     PVGSVACIMLEPGTRVSHAAVHLAATVGTLQVWVGEAGVRVYSSGQPGGARADKLLYQ
                     AKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
                     NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYD
                     IADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGE
                     IEPPQPAPDMLPPAIPEPETLGDSGHRGRG"
     gene            7165..7458
                     /gene="cas2"
                     /locus_tag="JNZ89_000281"
     CDS             7165..7458
                     /gene="cas2"
                     /locus_tag="JNZ89_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
                     /protein_id="HAY8934263.1"
                     /translation="MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIW
                     QQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ"
     gene            complement(7665..8702)
                     /gene="iap"
                     /locus_tag="JNZ89_000282"
     CDS             complement(7665..8702)
                     /gene="iap"
                     /locus_tag="JNZ89_000282"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase isozyme conversion
                     aminopeptidase"
                     /protein_id="HAY8934264.1"
                     /translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
                     PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIA
                     AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN
                     TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
                     KTTEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
                     EATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
                     LPLVKELAKAS"
     gene            8954..9862
                     /gene="cysD"
                     /locus_tag="JNZ89_000283"
     CDS             8954..9862
                     /gene="cysD"
                     /locus_tag="JNZ89_000283"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HAY8934265.1"
                     /translation="MAQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
                     HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
                     FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
                     KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
                     RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST
                     TSERQGRVIDRDQAGSMELKKRQGYF"
     gene            9864..11291
                     /gene="cysN"
                     /locus_tag="JNZ89_000284"
     CDS             9864..11291
                     /gene="cysN"
                     /locus_tag="JNZ89_000284"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HAY8934266.1"
                     /translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
                     GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
                     STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
                     KHLVVAINKMDLVDYSEETFTHIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE
                     SMSWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ
                     RVKALPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV
                     PSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYPVDINNLTQREVENLPLNG
                     IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVASSEFSA
                     FELELNALVRRHFPHWGARDLLGDK"
     gene            11291..11896
                     /gene="cysC"
                     /locus_tag="JNZ89_000285"
     CDS             11291..11896
                     /gene="cysC"
                     /locus_tag="JNZ89_000285"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HAY8934267.1"
                     /translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV
                     AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
                     VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
                     GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS"
     gene            11946..12269
                     /locus_tag="JNZ89_000286"
     CDS             11946..12269
                     /locus_tag="JNZ89_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3561 family protein"
                     /protein_id="HAY8934268.1"
                     /translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
                     IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
                     MWLLG"
     gene            12463..12774
                     /gene="ftsB"
                     /locus_tag="JNZ89_000287"
     CDS             12463..12774
                     /gene="ftsB"
                     /locus_tag="JNZ89_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HAY8934269.1"
                     /translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA
                     KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN
                     R"
     gene            12793..13503
                     /gene="ispD"
                     /locus_tag="JNZ89_000288"
     CDS             12793..13503
                     /gene="ispD"
                     /locus_tag="JNZ89_000288"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HAY8934270.1"
                     /translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
                     LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWV
                     LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
                     WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
                     DLALAEFYLTRTIHQENT"
     gene            13503..13982
                     /gene="ispF"
                     /locus_tag="JNZ89_000289"
     CDS             13503..13982
                     /gene="ispF"
                     /locus_tag="JNZ89_000289"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HAY8934271.1"
                     /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
                     TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
                     PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
     gene            13979..15028
                     /gene="truD"
                     /locus_tag="JNZ89_000290"
     CDS             13979..15028
                     /gene="truD"
                     /locus_tag="JNZ89_000290"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HAY8934272.1"
                     /translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
                     LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
                     AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
                     GAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
                     VVDGDALQLAGRGSWFVATTEELAELQHRVNDKELMITAALPGSGEWGTQRKALAFEQ
                     AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
                     RELINTTGDYAHIAE"
     gene            15009..15770
                     /gene="surE"
                     /locus_tag="JNZ89_000291"
     CDS             15009..15770
                     /gene="surE"
                     /locus_tag="JNZ89_000291"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HAY8934273.1"
                     /translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
                     LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
                     YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
                     PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD
                     EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
     gene            15764..16390
                     /gene="pcm"
                     /locus_tag="JNZ89_000292"
     CDS             15764..16390
                     /gene="pcm"
                     /locus_tag="JNZ89_000292"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HAY8934274.1"
                     /translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
                     WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS
                     VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
                     QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
     gene            16530..17621
                     /gene="nlpD"
                     /locus_tag="JNZ89_000293"
     CDS             16530..17621
                     /gene="nlpD"
                     /locus_tag="JNZ89_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator NlpD"
                     /protein_id="HAY8934275.1"
                     /translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP
                     ANTNSGMLITPPPKMGTTSTAQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSY
                     SGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGG
                     NAITQADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPAATTVTA
                     PVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAI
                     IATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMG
                     STGTSSTRLHFEIRYKGKSVNPLRYLPQR"
     gene            17684..18676
                     /gene="rpoS"
                     /locus_tag="JNZ89_000294"
     CDS             17684..18676
                     /gene="rpoS"
                     /locus_tag="JNZ89_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HAY8934276.1"
                     /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEE
                     LLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLQGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
     gene            complement(18770..20134)
                     /locus_tag="JNZ89_000295"
     CDS             complement(18770..20134)
                     /locus_tag="JNZ89_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family transporter"
                     /protein_id="HAY8934277.1"
                     /translation="MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG
                     IPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI
                     AALTLAAFFLGIPVFFDVSFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
                     HPGPVATAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLA
                     PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGS
                     PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVES
                     GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC
                     VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV
                     WAVI"
     gene            complement(20223..20998)
                     /locus_tag="JNZ89_000296"
                     /pseudo
     CDS             complement(20223..20998)
                     /locus_tag="JNZ89_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417219.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
     gene            complement(21003..21641)
                     /locus_tag="JNZ89_000297"
     CDS             complement(21003..21641)
                     /locus_tag="JNZ89_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HAY8934278.1"
                     /translation="MSDFAKVEQSLREEMTRIASSFFQRGYATGSAGNLSLLLPDGNL
                     LATPTGSCLGNLDPQRLSKVAADGEWLSGDKPSKEVLFHLALYRNNPRCKAVVHLHST
                     WSTVLSCLQGLDSSNVIRPFTPYVVMRMGNVPLVPYYRPGDKRIAQDLAELAADNQAF
                     LLANHGPVVCGESLQEAANNMEELEETAKLIFILGDRPIRYLTAGEIAELRS"
     gene            complement(21638..22900)
                     /locus_tag="JNZ89_000298"
     CDS             complement(21638..22900)
                     /locus_tag="JNZ89_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HAY8934279.1"
                     /translation="MIKIGVIADDFTGATDIASFLVENGLPTVQINGVPTGKMPEAID
                     ALVISLKTRSCPVVEATQQSLAALSWLQQQGCKQIYFKYCSTFDSTAKGNIGPVTDAL
                     MDALDTPFTVFSPALSVNGRTVYQGYLFVMNQLLAESGMRHHPVNPMTDSYLPRLVEA
                     QSTGRCGVVSAHVFEQGVDAVRQELARLQQEGYRYAVLDALTEHHLEIQGEALRDAPL
                     VTGGSGLAIGLARQWAQENGNQAREAGHPLAGRGVVLSGSCSQMTNRQVAHYRQIAPA
                     REVDVARCLSTETLAAYAHELAEWVLGQESVLAPLVFATASTDALAAIQQQYGAQKAS
                     QAVETLFSQLAARLAAEGVTRFIVAGGETSGVVTQSLGIKGFHIGPTISPGVPWVNAL
                     DKPVSLALKSGNFGDEAFFSRAQREFLS"
     gene            complement(22897..23805)
                     /locus_tag="JNZ89_000299"
     CDS             complement(22897..23805)
                     /locus_tag="JNZ89_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY8934280.1"
                     /translation="MKTGSEFHVGIVGLGSMGMGAALSCVRVGLSTWGADLNSNACAT
                     LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST
                     IASADAQEIATALAGFDLEMLDAPVSGDAVKAANGEMTVMASGSDIAFERLAPVLEAV
                     AGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG
                     NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS
                     NAGYGKEDDSAVIKIFSGITLPGAKS"
     gene            23971..24768
                     /locus_tag="JNZ89_000300"
     CDS             23971..24768
                     /locus_tag="JNZ89_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8934281.1"
                     /translation="MSAGQRKEQKLIPVERRQIILEMVAEKGIVSIAELTDRMNVSHM
                     TIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQP
                     GSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENR
                     SCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDA
                     TKYGQVATWLALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
     gene            complement(24819..25475)
                     /gene="pphB"
                     /locus_tag="JNZ89_000301"
     CDS             complement(24819..25475)
                     /gene="pphB"
                     /locus_tag="JNZ89_000301"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HAY8934282.1"
                     /translation="MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETD
                     LLISVGDNIDRGPESLDVLRLLNQPWFISVKGNHEAMELDAFATGDGNMWLASGGDWF
                     FDLNDSEQQEAIDLLLKFHHLPHIIEITNDIIKYVIAHADYPGDEYLFGKEIAESELL
                     WPVYRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIR
                     "
     gene            complement(25581..28142)
                     /gene="mutS"
                     /locus_tag="JNZ89_000302"
     CDS             complement(25581..28142)
                     /gene="mutS"
                     /locus_tag="JNZ89_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HAY8934283.1"
                     /translation="MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDA
                     KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
                     KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
                     ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
                     TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
                     LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF
                     TAGLQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
                     LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
                     EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
                     YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
                     YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
                     RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
                     NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
                     DVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
                     ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV"
     gene            28218..28352
                     /locus_tag="JNZ89_000303"
     CDS             28218..28352
                     /locus_tag="JNZ89_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934284.1"
                     /translation="MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIASVE
                     "
     gene            28429..28782
                     /locus_tag="JNZ89_000304"
     CDS             28429..28782
                     /locus_tag="JNZ89_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HAY8934285.1"
                     /translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR
                     LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP
                     VPELPEKYRPKKPRE"
     gene            complement(28819..30897)
                     /gene="flhA"
                     /locus_tag="JNZ89_000305"
                     /pseudo
     CDS             complement(28819..30897)
                     /gene="flhA"
                     /locus_tag="JNZ89_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311614.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase transcriptional activator
                     FlhA"
     gene            complement(30971..31981)
                     /gene="hypE"
                     /locus_tag="JNZ89_000306"
     CDS             complement(30971..31981)
                     /gene="hypE"
                     /locus_tag="JNZ89_000306"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311613.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation carbamoyl dehydratase
                     HypE"
                     /protein_id="HAY8934286.1"
                     /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
                     QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPCYLSCGFILEE
                     GLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWG
                     AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA
                     LRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLV
                     IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
                     IC"
     gene            complement(31978..33099)
                     /gene="hypD"
                     /locus_tag="JNZ89_000307"
     CDS             complement(31978..33099)
                     /gene="hypD"
                     /locus_tag="JNZ89_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HAY8934287.1"
                     /translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
                     THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
                     PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
                     AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF
                     HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
                     NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
                     QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA"
     gene            complement(33099..33371)
                     /gene="hypC"
                     /locus_tag="JNZ89_000308"
     CDS             complement(33099..33371)
                     /gene="hypC"
                     /locus_tag="JNZ89_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation protein HypC"
                     /protein_id="HAY8934288.1"
                     /translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
                     GQWVLVHVGFAMSVITEAEARDTLDALQNMFDVEPDVGALLYGEEK"
     gene            complement(33362..34234)
                     /gene="hypB"
                     /locus_tag="JNZ89_000309"
     CDS             complement(33362..34234)
                     /gene="hypB"
                     /locus_tag="JNZ89_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HAY8934289.1"
                     /translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIK
                     APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
                     KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
                     NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
                     EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
                     MDQWLNWLETQRCA"
     gene            complement(34238..34588)
                     /gene="hypA"
                     /locus_tag="JNZ89_000310"
     CDS             complement(34238..34588)
                     /gene="hypA"
                     /locus_tag="JNZ89_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HAY8934290.1"
                     /translation="MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL
                     AFCFDLVCRGSVAEGCKLHLEEQEVECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA
                     DDGLQIRRIEIDQE"
     gene            34800..35261
                     /gene="hycA"
                     /locus_tag="JNZ89_000311"
     CDS             34800..35261
                     /gene="hycA"
                     /locus_tag="JNZ89_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase regulator HycA"
                     /protein_id="HAY8934291.1"
                     /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
                     AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKEGEDKQRIAQAQLSIDGM
                     IDGKVNIRDREQVLEHYLEKIAGVYDSLYTAIENNVPVNLSQLVKGQSPAA"
     gene            35386..35997
                     /locus_tag="JNZ89_000312"
     CDS             35386..35997
                     /locus_tag="JNZ89_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY8934292.1"
                     /translation="MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLRVMLNEK
                     ESAPQLCHHCEDAPCAVVCPVNVITRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGS
                     RPLDIPANANTPKAPPAPPAPARISTLLDWVPGIRAIAVKCDLCSFDEQGPACVRMCP
                     TKALHLVDNTDIARVSKRKRELTFNTDFGDLTLFQQAQSGEAK"
     gene            35994..37820
                     /gene="hycC"
                     /locus_tag="JNZ89_000313"
     CDS             35994..37820
                     /gene="hycC"
                     /locus_tag="JNZ89_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
                     /protein_id="HAY8934293.1"
                     /translation="MSAISLINSGVVWFVAAAVLAFLFSFQKTLSGWIAGIGGAVGSL
                     YTAAAGFTVLTGAVGVSGALSLVSYDVQISPLNAIWLITLGLCGLFVSLYNIDWHRHA
                     QVKCNGLQINMLMAAAVCAVIASNLGMFVVMAEVMALCAVFLTSNSKEGKLWFALGRL
                     GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWV
                     PQAHANASAPAAALFSTVVMKIGLLGILILSLLGGNAPLWWGIVLLVLGMITAFVGGL
                     YALMEHNIQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSL
                     FKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEW
                     VIYQSFFKLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAEN
                     ATCAPLLMSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLI
                     ACPLLPFIIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKL
                     RKWLNPVSLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA"
     gene            37823..38746
                     /gene="hycD"
                     /locus_tag="JNZ89_000314"
     CDS             37823..38746
                     /gene="hycD"
                     /locus_tag="JNZ89_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycD"
                     /protein_id="HAY8934294.1"
                     /translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
                     DIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY
                     LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
                     TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
                     VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFEN
                     SMARLRLDITSRITWAGFGFAFLAFVSLLAA"
     gene            38764..40473
                     /locus_tag="JNZ89_000315"
     CDS             38764..40473
                     /locus_tag="JNZ89_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase large subunit"
                     /protein_id="HAY8934295.1"
                     /translation="MSEEKLGQHYLAALNEAFPGVVLDHAWQTKEQLTVTVKVNYLPE
                     VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYP
                     SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
                     PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
                     GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
                     EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
                     RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
                     MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD
                     NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
                     LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
                     PLK"
     gene            40483..41025
                     /gene="hycF"
                     /locus_tag="JNZ89_000316"
     CDS             40483..41025
                     /gene="hycF"
                     /locus_tag="JNZ89_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycF"
                     /protein_id="HAY8934296.1"
                     /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA
                     ACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
                     KEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR
                     QKCLVPSDRIELTRHMKEAI"
     gene            41025..41792
                     /gene="hycG"
                     /locus_tag="JNZ89_000317"
     CDS             41025..41792
                     /gene="hycG"
                     /locus_tag="JNZ89_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycG"
                     /protein_id="HAY8934297.1"
                     /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVD
                     CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
                     APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
                     GLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQ
                     LGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEVRIR"
     gene            41789..42199
                     /locus_tag="JNZ89_000318"
     CDS             41789..42199
                     /locus_tag="JNZ89_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HycH family protein"
                     /protein_id="HAY8934298.1"
                     /translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
                     LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA
                     QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD"
     gene            42192..42662
                     /gene="hycI"
                     /locus_tag="JNZ89_000319"
     CDS             42192..42662
                     /gene="hycI"
                     /locus_tag="JNZ89_000319"
                     /EC_number="3.4.23.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation peptidase HycI"
                     /protein_id="HAY8934299.1"
                     /translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE
                     NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK
                     EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE"
     gene            complement(42821..44245)
                     /locus_tag="JNZ89_000320"
     CDS             complement(42821..44245)
                     /locus_tag="JNZ89_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY8934300.1"
                     /translation="MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMA
                     VKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGD
                     EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
                     ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASA
                     LAAKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPA
                     YSARVFREKGVTIDKALGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSL
                     RNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYR
                     ISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGT
                     LTRTRKKSFWWYKKVIASNGEDLE"
     gene            complement(44254..45711)
                     /gene="ascF"
                     /locus_tag="JNZ89_000321"
     CDS             complement(44254..45711)
                     /gene="ascF"
                     /locus_tag="JNZ89_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose/arbutin/salicin transporter
                     subunit IIBC"
                     /protein_id="HAY8934301.1"
                     /translation="MAKNYAALARSEIAALGGVDNISAVTHCMTRLRFVIKDDQLIDS
                     PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTPRRI
                     GAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF
                     LPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT
                     YTVIPALVMTWCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS
                     AISALVYSIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE
                     IGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS
                     LISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFIL
                     TLLLGFEDIPVEEAAAQARKHQSVQPTVAKEVSLN"
     gene            45971..46981
                     /locus_tag="JNZ89_000322"
     CDS             45971..46981
                     /locus_tag="JNZ89_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY8934302.1"
                     /translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG
                     YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
                     AEEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVW
                     CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIA
                     NGKWTPASGAEGVETLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD
                     DIAIAPYIVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIHRDSLIAL
                     SR"
     gene            47130..47657
                     /gene="hydN"
                     /locus_tag="JNZ89_000323"
     CDS             47130..47657
                     /gene="hydN"
                     /locus_tag="JNZ89_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport protein HydN"
                     /protein_id="HAY8934303.1"
                     /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
                     HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
                     AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
                     EQLSAEKRRRTALMF"
     gene            47810..50062
                     /gene="hypF"
                     /locus_tag="JNZ89_000324"
     CDS             47810..50062
                     /gene="hypF"
                     /locus_tag="JNZ89_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HAY8934304.1"
                     /translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
                     GVEVRLREDPETFLVQLHQHCPPLARIDSVEREPYIWSQLPTEFTIRQSAGGAMNTQI
                     VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
                     ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
                     KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV
                     LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
                     EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP
                     PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPKYVV
                     HDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE
                     NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPE
                     TASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEA
                     LAASCHGVTHPVTMPLVDNQLDLAAFWQQWLNWQAQVNQRAWAFHDALAQGFAALMRE
                     QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
                     RWLAGEVQNG"
     gene            complement(50190..51323)
                     /gene="norW"
                     /locus_tag="JNZ89_000325"
                     /pseudo
     CDS             complement(50190..51323)
                     /gene="norW"
                     /locus_tag="JNZ89_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417191.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavorubredoxin reductase NorW"
     gene            complement(51320..52759)
                     /gene="norV"
                     /locus_tag="JNZ89_000326"
     CDS             complement(51320..52759)
                     /gene="norV"
                     /locus_tag="JNZ89_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic nitric oxide reductase
                     flavorubredoxin"
                     /protein_id="HAY8934305.1"
                     /translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
                     NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
                     TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
                     VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
                     PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
                     AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
                     FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALELCREHGREI
                     ARQWALAPLPQSTVNKVVKEETSATTTADLGPRMQCRVCQWIYDPAKGEPMQDVAPGT
                     PWSEVPDNFLCPECSLGKDVFEELASEAK"
     gene            52946..54460
                     /gene="norR"
                     /locus_tag="JNZ89_000327"
     CDS             52946..54460
                     /gene="norR"
                     /locus_tag="JNZ89_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311592.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase transcriptional regulator
                     NorR"
                     /protein_id="HAY8934306.1"
                     /translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL
                     RYDSRQFIPLAIDGLAKGVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI
                     PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA
                     LLIEQLESQNMMPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG
                     TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE
                     MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREE
                     VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGAR
                     NLLQHYRFPGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVP
                     VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGMKD"
     gene            complement(54457..55422)
                     /gene="gutQ"
                     /locus_tag="JNZ89_000328"
     CDS             complement(54457..55422)
                     /gene="gutQ"
                     /locus_tag="JNZ89_000328"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311591.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase GutQ"
                     /protein_id="HAY8934307.1"
                     /translation="MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGK
                     VVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
                     KELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT
                     LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASV
                     MDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTL
                     QAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
     gene            complement(55415..56188)
                     /gene="srlR"
                     /locus_tag="JNZ89_000329"
                     /gene_synonym="gutR"
     CDS             complement(55415..56188)
                     /gene="srlR"
                     /locus_tag="JNZ89_000329"
                     /gene_synonym="gutR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucitol operon DNA-binding transcriptional
                     repressor SrlR"
                     /protein_id="HAY8934308.1"
                     /translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
                     HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
                     VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKSASFHGQLAENA
                     FEHFSFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
                     VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
     gene            complement(56255..56613)
                     /gene="gutM"
                     /locus_tag="JNZ89_000330"
                     /pseudo
     CDS             complement(56255..56613)
                     /gene="gutM"
                     /locus_tag="JNZ89_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417186.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
     gene            complement(56718..57497)
                     /gene="srlD"
                     /locus_tag="JNZ89_000331"
     CDS             complement(56718..57497)
                     /gene="srlD"
                     /locus_tag="JNZ89_000331"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HAY8934309.1"
                     /translation="MNQVAVVIGGGQTLGAFLCHGLVAEGYRVAVVDIQSDKAANVAQ
                     EINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
                     GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
                     GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK
                     VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
     gene            complement(57501..57872)
                     /gene="srlB"
                     /locus_tag="JNZ89_000332"
                     /gene_synonym="gutB"
     CDS             complement(57501..57872)
                     /gene="srlB"
                     /locus_tag="JNZ89_000332"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HAY8934310.1"
                     /translation="MTVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHC
                     HGELKGALHPGLQFTLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
                     AGPVPDDIAPGSVLKFESVKE"
     gene            complement(57883..58842)
                     /gene="srlE"
                     /locus_tag="JNZ89_000333"
                     /gene_synonym="gutE"
     CDS             complement(57883..58842)
                     /gene="srlE"
                     /locus_tag="JNZ89_000333"
                     /gene_synonym="gutE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HAY8934311.1"
                     /translation="MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQ
                     LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
                     IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA
                     VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
                     LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
                     GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
     gene            complement(58839..59402)
                     /gene="srlA"
                     /locus_tag="JNZ89_000334"
                     /gene_synonym="gutA"
     CDS             complement(58839..59402)
                     /gene="srlA"
                     /locus_tag="JNZ89_000334"
                     /gene_synonym="gutA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HAY8934312.1"
                     /translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL
                     INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSQGRFMPEKYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLALSYLLVGLVTNFFRGWV
                     TDLTTAIFEKKMGIQLEQKVHLAGATS"
     gene            59658..60743
                     /gene="mltB"
                     /locus_tag="JNZ89_000335"
     CDS             59658..60743
                     /gene="mltB"
                     /locus_tag="JNZ89_000335"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HAY8934313.1"
                     /translation="MFKRRYVTLLPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQ
                     HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
                     SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
                     VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
                     GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN
                     GQAPGLPNGFKTRYSISQLATAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
                     ITRYNHSTHYAMAVWQLGQAVALARVQ"
     gene            60888..61385
                     /gene="pncC"
                     /locus_tag="JNZ89_000336"
     CDS             60888..61385
                     /gene="pncC"
                     /locus_tag="JNZ89_000336"
                     /EC_number="3.5.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidase"
                     /protein_id="HAY8934314.1"
                     /translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG
                     SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMVIGALKAARADYAVSI
                     SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ
                     FLQNT"
     gene            61465..62526
                     /gene="recA"
                     /locus_tag="JNZ89_000337"
     CDS             61465..62526
                     /gene="recA"
                     /locus_tag="JNZ89_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HAY8934315.1"
                     /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
                     SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
                     IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
                     GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
                     YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
                     DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
                     TPDFSVDDSEGVAETNEDF"
     gene            62769..63269
                     /gene="recX"
                     /locus_tag="JNZ89_000338"
     CDS             62769..63269
                     /gene="recX"
                     /locus_tag="JNZ89_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HAY8934316.1"
                     /translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKN
                     GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS
                     REATEKAMRECDIDWCALARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
                     WRNFAD"
     gene            63397..66027
                     /gene="alaS"
                     /locus_tag="JNZ89_000339"
     CDS             63397..66027
                     /gene="alaS"
                     /locus_tag="JNZ89_000339"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HAY8934317.1"
                     /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
                     NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
                     KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
                     FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
                     SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
                     VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
                     ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
                     RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
                     KGELKDANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA
                     THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL
                     PIETNIMDLEVAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
                     ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
                     QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
                     STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
                     AAALPAALASVKGWVSAKLQ"
     gene            66262..66447
                     /gene="csrA"
                     /locus_tag="JNZ89_000340"
     CDS             66262..66447
                     /gene="csrA"
                     /locus_tag="JNZ89_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HAY8934318.1"
                     /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
                     EEIYQRIQAEKSQQSSY"
     gene            66762..66854
                     /locus_tag="JNZ89_000341"
     tRNA            66762..66854
                     /locus_tag="JNZ89_000341"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:66796..66798,aa:Ser,seq:gct)
BASE COUNT        15647 a        17100 c        18301 g        15807 t
ORIGIN      
        1 taatgaatca ctctggtccg gtgatttaat cgggtcagaa gaaccggatg aacaagcttt
       61 cagccagggt tgtgcggcct agtttgccga cagtaacaag aaggcgttgc tggctgaaat
      121 tggcgtcggc accctggatc aggcgatgat ggcagtgatg ccgtttaaac ataataatct
      181 gcggcttctg gggctgagta acaaaatcct gctggctgat gagatccacg cctgtgacgc
      241 ttatatgtcg tgcattcttg aagggctgat cgagcggcag gcgcgtggcg gaaacagcgt
      301 tattttgctt tctgctacgt tatctcaaca gcagcgcgac aaactcgtcg ccgcctttgc
      361 gcgtggtgca gagggccagc aagaagcccc actcctggga aaagatgatt acccctggct
      421 gacgcatgtc acgaaaaccg atgtacattc gcaccgggta gcgacgcgca aagaagttga
      481 acgtagcgtg agcgtgggtt ggctccatag tgaacaagag tgtattgcgc gtatcgaatc
      541 ggcggtaagt caggggaaat gcatcgcctg gattcggaat tctgttgatg acgctattca
      601 ggtgtatcgt cagctgcttg cccgcggcgt cattcctgct tccagccttt cactttttca
      661 tagccgcttt gcttttagcg atcgccagcg aattgaaacg gaaacgctgg cacgctttgg
      721 taaatattgt agtttacaga gagcgtctca agtcattgtt tgtacacaag taattgaaca
      781 aagcgtggat attgacctgg acgaaatgat ctccgacctg gcccccattg atttgctaat
      841 ccagcgagcg gggcgattac agcggcatat ccgcgatatt aatggtcagt taaagcgtga
      901 cggaaaagac gagcgttccc cccctgaatt gctgattctg gcccccgtct gggatgacgc
      961 tcctggtgac gaatggttcg gcagtgccat gcgtaacagt gcatatgtct atcccgatca
     1021 tgggcgaatc tggctgacgc agcgtgtgct gcgtgagcaa ggcgctattc agatgccgca
     1081 cgcagcccgg cttcttattg aatcagttta cggtgaggac gtggtaatgc cggaaggatt
     1141 tgcccgcagc gagcaggagc aagtgggcaa atattactgt gatcgcgcaa gggctaaaaa
     1201 gtatgtgctg aacttcaggc tcggctatgc cgccaatatc aacgattacc ttccggaaaa
     1261 actgtcgaca cgtctggctg aagagtctgt ttccctgtgg ctggctacct gtattgacga
     1321 tgtggtgaag ccttatgcca ccggtgctca cgcatgggaa atgagcgttg tcagagtgcg
     1381 ccgaagctgg tggaaaaaac atcgggatga gttttcttta ctggaagggg atgcgttcag
     1441 gcagtggtgc gttgaacagc ggcaagatcc ggaaatggca aacgtgattt tagtcaccga
     1501 tgacgaaagt tgcgggtatt cggccaggga gggattgatt ggcaaggttg gttgagatgt
     1561 ctgcgacaag actctctgaa tagttgatat acagaaaagg atggaaggat ggacaaccga
     1621 cctgggatgg tcttttttac gagaggatgc gtatgaactc gttttcactt ctgacaaccc
     1681 cgtggttgcc cgttcgtttt aaagacggaa cgacaggcaa actggcacca gtcgatctgg
     1741 ctgatgaaaa tgttgtcgat atcgctgcgc cgcgggcaga tctccagggg gcggcctggc
     1801 agtttttgct ggggctacta caaaccagct tcgcgccaaa agatcaacgt agttgggatg
     1861 atatctggga agacggactg gaagctgaaa agctaaggga agcattgctg tctttagaac
     1921 atgcttttca gtttgggcca gattcccctt catttatgca ggattttgat gaattaaaag
     1981 ttaaggcaac ttttattgct tcgcttcttc ctgacgcacc aggaaaacaa acaaaagaac
     2041 gaaatacaga ccattttatt aagcgagaca caactcagca tctgtgcctg cattgtgtgc
     2101 ctttagcgct tttttcaatc cagttgaatg cacctatagg tggacgcggt tactatcctg
     2161 ggctacgtgg cggagggcct ctgacgacac ttatagaatt gctggagtat cagggcaatc
     2221 aacaaacccc tttgtggcga aagctgtggc taaacgtaat gccgcaagat gaagccgatt
     2281 tacctttacc aaaaaccttt gatgacctgg tctttccttg gcttgcaccg acgcgtacca
     2341 gcgaactgga cggtgctgtg gtaacggatg aacaagtcaa taaacttcag gcctactggg
     2401 gaatgccacg acgtatacgt attgatttta agacaacctc aataggtaac tgcgacattt
     2461 gcggtaggca gagcgatgct cttttgggct tgatgtcact caaaaactat ggtgttcaat
     2521 acgtcatgtg gcgccatcct ctaacacctt accgtctgcc gcttaaagag ggtggagatt
     2581 tttactcagt taaaccacaa cctggtggtt taatctggcg cgactggtta ggcctcatag
     2641 aggtaggtaa ctcaaaaaac aatactgaac tccccgcaca ggtcgtgaaa cttttgaatg
     2701 ccagcaatct aaagcagaca agggtgggct tatggggatt tggttttgat tttgaagata
     2761 tgaaggttcg ttgttggtat gaacaccatt tcccgctgtt gttaaacaaa aaagaagacc
     2821 taatacctaa gttgcgtctg gcagcgcaag cggcatcaca cattctaagc ttgttacacc
     2881 gagcgttgaa agaagcatgg ttctctgaga agaaaaccac aaagcttgat ttcggttttg
     2941 tggatattga cttctggaac aaaactcagc atcgattcct gagattagtg cgcaaaattg
     3001 aagaaggtca ggatccggac gaattactca gtaaatggca aaaggaaatg tggttattcg
     3061 cgcgtcagga ttttgacgat cgtgtcttta ccaatccata tgagcccgtt gatttggaac
     3121 gcgtcatgac cgcacgcaag aaatatttta caacatcagc ggagaagcaa aatgctaacg
     3181 ccgccaggga gaaaaagcag gaggctgctg aatgagtatt gtaaaagatg agcataaagt
     3241 tgcgctgcgt aaatggcatg aagagttgca ggataaacgc ggcgagcgtg ccagtctgcg
     3301 gcgtagtacg acggttaatg atgtttgtct gacggatgga tttcgcctgt ttcttaagaa
     3361 cagacaaata aagtggcagg atgaacccga gtggcgtatc accgcactag cgctgatagc
     3421 agcagttagc gccaatgtta aagctattga cgaacggcag ccttttgccg cgcaactggc
     3481 ggcggtaatg aaaaaggggc ggtttactcg tttgttggca gtaaaaacgc cggatgattt
     3541 attgcggcag ttacgccgtg cggtcaaatt attaaacggt tccgtcaatc ttgactctct
     3601 ggaagagggg gtcttccgct ggtgccagga gagcgatgac ctgctcaatc atcaccgccg
     3661 ccagcagcga ccaacagaat ttatccgtat ccgctgggcg ctgggcgctg ggcgctgggc
     3721 gctggaatat taccaggctg gcgacgccga taacgaacaa aattaataaa ggactatctc
     3781 atgacaacat ttattcagct tcatttgtta accgcttacc ctgctgccaa tcttaaccgt
     3841 gatgattccg gctctccgaa aactgtgatt ctgggtggag caacgcgtct gcgcgtttcc
     3901 tcgcaaagtc tgaagcgtgc ttggcgcact tctgaacttt ttgaacaggc gctggcgggc
     3961 catattggtg ttcgtagcgg gcgtattgcg cgtgaggcgg caactatcct gattgagaaa
     4021 ggaatcgaag ataaaaaagc catcgaatgg gcagtagaga tagccgatta tcttgggaaa
     4081 gccaaaaaag acaaaaaaca aaaaaacgac aaaaaaccaa aagatccgct cactagcgcc
     4141 gaaactgaac agctcgtcca tatcagcccg gcagaatttg acgccgtaaa agcgctggcc
     4201 catcaactgg cagaagaaaa gcgcgcgcca aaagagaaag atctcgcttt gttacgtaaa
     4261 gaccgtatgg cggtagatat cgctatgttt ggtcgtatgc tggcgaaaaa acccgggttt
     4321 aatgtagaag ccgcctgcca ggtcgcgcat gcgtttggtg tcagtgaaac gattgtcgaa
     4381 aatgattttt tcaccgccgt agatgattta cgccaggctt ctgaagatgc cggtgccggt
     4441 catgtagatg aaaccggatt cggttctgcg ctgttctaca cctatatctt atctgcattg
     4501 ataaagatct gctggtagaa aacctcggcg gtgacgaagc gttagctaat cagaccatac
     4561 gcgcctttac ggaagccgcg cttaaagtct ccccaaccgg taaacaaaac agctttgcca
     4621 gccgggctta tgcctcctgg gcgctggcag aaaaaggcac cgatcaaccg cgttctctgg
     4681 cggcagcttt ctatgaaccc attaatggca cccgtcagtt agaggtggcg gtgcagcgta
     4741 ttacaactct tcgcgaaaat atgaatacgg tctacgaaca gaagaccgat tacgcaagtt
     4801 ttgacgtgat gaacaaacag ggaagcatga aggacgtgct ggactttatc tgcgcgtaag
     4861 gggcggctta tgagccaata tctgattttt cagcttcatg ggccgatggc atcctggggc
     4921 gtcgatgccc ccggcgaagt gcgtcatacc catgaactgc cttcgctctc agcattgctg
     4981 gggctgctgg ctgccggggt agggatccgg cgtgatgata ccgaacgctt aaacgcgttt
     5041 aatcgccact attcactggt ggtttgcgcc agccgtaacc cgcgctgggc acgggattat
     5101 cacacggtcc agatgccaaa agaggtgcgt aaagcacgtt atttcagccg tcgcgaagag
     5161 ttgagcgacc ctgagctttt gagcgcgatt atctcccggc gcgactacta caccgatgcc
     5221 tggtggatgg tggcggtggc aacaacagcc gatgcgcctt acagcctcga acagttgcag
     5281 gacggtttac gccatccagt ttttccgctt tatctggggc gaaaaagtca tccgctggca
     5341 ttacctcttg cgccgttact gctcgaaggc aacgcgtgtg atgccttatg taatgcatac
     5401 caacagtatc aggatcattt ccataaactg aaagtttcac tcccgaaact tcaggatgaa
     5461 tgctggtggg aagggaaaca cgacggcctg gtcgcgagca aaatattacg ccgccgggat
     5521 gttcctttaa atcgtcagca gtggctgttt ggggaacgca ccgtcaatca ggggccgtgg
     5581 ctcagcaagg aggaaccatg tacctctcaa gaataacctt acataccggc cagctttcgc
     5641 ctgcgcagtt gctgcatctg gtggatcgcg gtgaatatgt gatgcatcag tggctgtggg
     5701 atctcttccc tagcggcaaa gaaaggcaat ttctttatcg tcgggaagaa ctccagggcg
     5761 cgtttcgctt ttttgtactg tcgcaggaac gcccggcgga aagtgatacg ttcaccatag
     5821 aatgccggtc atttgcgccc gagctgtgta ccggacaaca actttgtttc aacctgcggg
     5881 cgaatccaac aatctgtaaa gcgggcaagc gccacgatct gctgatggag gcgaaacggc
     5941 aggtgagggg gcaggcggaa ggaagtgatg tctggttgca tcaacaacag gcggcgctgg
     6001 actggctggc agcgcagggg gagagaagtg gttttacact gctggatatc tcggttgatg
     6061 cctaccgaca acagcaactg cggcgggaaa actcccggca actgatccag ttcagtagcg
     6121 tggattatac ggggatgctt acggtcaccg atcccgggtt atttctgcaa cgtctcagtc
     6181 aggggtatgg caaaagccgc gcgttcggct gtggtctgat gctgatcaaa cccggagcag
     6241 aggcgtgacg tttgtaccgc tgagcccgat cccgttaaaa gatcgcacct ctatgatctt
     6301 cctccagtac gggcaaatcg acgtactgga cggcgctttc gtgctgatcg ataaaaccgg
     6361 gatccgcacg cacattccgg tgggatcggt cgcctgcatt atgctcgaac cgggaacgag
     6421 agtttcccac gcggcggtgc atctggccgc cacggtgggg acgctacagg tctgggtcgg
     6481 tgaagcgggt gttcgcgtct actcttccgg acaacccggt ggggcgcgtg ctgataagtt
     6541 actctaccag gcaaagctgg ctttaacgga agatctacgt ctgaaggtgg tgcgcaaaat
     6601 gtatgaatta cgttttcgtg agccaccgcc agctcgccgt tcagtggagc agctacgtgg
     6661 aattgaggga tctcgcgttc gccagacgta tgcattactg gcgaaacaat atggtgtgaa
     6721 atggaatggt cgcaaatacg atcctaaaga ctgggaaaaa ggcgatgttg tgaatcgctg
     6781 catcagtgct gctacatcat gtctgtacgg tatatctgaa gcggcagtat tagccgcggg
     6841 atatgcgccc gctattgggt ttatccatag tggcaaaccg ctttcatttg tttatgacat
     6901 agccgatatc attaaatttg attcggttgt accaaaggca tttgaaatag cggcgaggca
     6961 acccgcagaa cctgataaag aagtcagatt agcctgtcgt gatattttcc gtagcactaa
     7021 gttaacgggc aaattaatac cgttaattga ggaagtcctt gccgcaggtg aaattgaacc
     7081 gccacaacct gcgccggata tgttaccgcc agccatcccc gaacctgaaa cgttgggcga
     7141 tagcggtcat cgaggacgcg gctgatgagc atggtcgtgg ttgttacaga aaatgtcccg
     7201 ccacgcttac gtggacggct cgcaatctgg ctactggaag tgcgtgccgg tgtgtatgtt
     7261 ggtgatacat caaaacgtat tcgggagatg atctggcagc aaattaccca actggctggt
     7321 tgcggaaatg tggtgatggc ctgggcgacc aataccgagt cgggttttga atttcagacc
     7381 tggggagaaa acagacgtat tccggtggat ttggatgggt tacgtttggt ttcttttctt
     7441 cctgttgata atcaataagt tatccgttct ttaaaaataa ggaaatgttt taatttagtt
     7501 ggtagattgt tgatgcggaa taaatttgtt taaaaacagt tatgtatgct tagtgtgttc
     7561 cccgcgccag cggggataaa ccgggcgcac tggatgcgat aatggatatc acttagaatt
     7621 ccccgcccct gcggtagaac tcccagctcc cattttcaaa cccatcaaga cgccttcgcc
     7681 agctccttca ccaacggtag cattatccgc ataacgtcac ggcagcgacg ttctattctt
     7741 ccaggaagtg ccttatcaat atgctgttga ttatccagtc ttacgtcatg ccagctattt
     7801 cccgcaggga atgcggctgt ttttgcgcgt tgctgataac catccttatt cccaagattc
     7861 cagttagtcg cttccaccga aagtacagca atgcccgctt tgtcgaatat ttctgcgtca
     7921 ttacaacacc cagtgccttt cggataattt ttattcaacc ccggattggt cgttgcggct
     7981 attccgtgac tgcgcgcaat tgccagcgcc ctgtcgcgcg ttaatttcct tactgcttca
     8041 gtggttttta caccgctgtt gaaatacaat ttatcgccaa caattaagtt atcgagatta
     8101 atcaccagca gcgtattttt cttttcggtg tcactcatcc gcttgagtaa attctcagcg
     8161 cctaatttcc cttcctcttc gccgctggtc gccacaaatc gaataccata ctcggtaggc
     8221 gtatttttca ggcgttctgc caattccagc atgacaccta aacctgcggc gttatcatcc
     8281 attccttgta acgtcagccc gccgagattg gcatcggcgt cagcatcgct cagcggggcg
     8341 taagtatcca gatgcgccat aatgatgatc tgctgcggcg cttttccttc atgagcggca
     8401 atcaccgtac ttcccgtcac gttatgccag ctcttacgat tatcgcgggc ggtataaata
     8461 taccgactat taaatgtccg aatatcactg cgataaccca tttgctgaaa ctgttggcga
     8521 atataatcgg cagataacat ttctgcagga gttccggtca tgcgtcccgg aaagaaagta
     8581 gcaatatgtc gtgcctgagt attagcaaaa tcgccaggtt taggtgacga ggcgtgtacg
     8641 gggagaataa agcatacgcc gagcgccagg gcagcggtac ggtggcgcaa tgcggaaaac
     8701 atagtgagtc cttaaatacc atgcaaattt ttttaccgcc atagtatgaa actgccgctg
     8761 cgctaaaaca atttcaaatc ttcctaaacg cccgaaatcc ggtgccttaa gcactttttg
     8821 atattagctt tgccaaatcg ttattccgtt aaggaactac tcattctaat tggtaatttc
     8881 attcgttctc ttacgctccc tatagtcgaa acatctgatg gcaagaaaat agcggtattg
     8941 caaaggaacg gttatggctc aaaaacgact tactcacctg cggcaactgg aggcggaaag
     9001 catccacatt attcgcgagg tggcggcaga attctcaaat ccggtgatgc tctactctat
     9061 cggtaaagat tccagcgtca tgctgcatct ggcgcgcaag gcgttttatc caggtacgct
     9121 gcctttcccg ttgctgcatg tcgataccgg ctggaaattc cgcgagatgt atgagttccg
     9181 cgatcgtact gctaaagcct acggctgcga gctgctggtg cataaaaacc cggaaggcgt
     9241 ggcgatgggg attaatccat tcgtacacgg cagcgcgaaa cataccgata ttatgaaaac
     9301 tgaaggcctg aaacaggcgc tgaacaaata cggttttgat gccgccttcg gtggtgcgcg
     9361 ccgtgatgaa gagaaatccc gcgctaaaga gcgaatctac tctttccgtg accgcttcca
     9421 tcgctgggat ccgaaaaatc agcgcccgga gctgtggcac aactacaacg ggcaaattaa
     9481 caaaggtgaa agcatccgcg tcttcccgct ctctaactgg accgagcagg atatctggca
     9541 atacatctgg ctggaaaata tcgacattgt gccactgtat ctcgctgcgg aacgtccggt
     9601 tctggaacgc gacggtatgt tgatgatgat tgatgacaac cgtatcgacc tgcaaccggg
     9661 cgaagtgatt aaaaaacgga tggtgcgttt ccgtacgctg ggctgctggc cgctgaccgg
     9721 tgcggtggag tcaaatgcac aaacactgcc ggagatcatc gaagagatgc tggtttctac
     9781 caccagtgaa cgtcagggcc gcgtgattga ccgcgaccag gcggggtcta tggagctgaa
     9841 aaaacgtcag gggtattttt aagatgaaca ccgcacttgc acaacaaatc gccaatgaag
     9901 gcggcgtcga agcctggatg attgcgcaac aacataaaag cctgctgcgt tttctgacct
     9961 gtggtagcgt cgatgacggc aaaagtaccc tgattggtcg cctgctgcac gatacccgcc
    10021 aaatctacga agatcagctc tcatcgctgc ataacgacag taagcgtcac ggcacccagg
    10081 gcgaaaagct ggatctggca ctgctggtgg acggcctgca agctgagcgc gaacagggca
    10141 tcaccattga cgtggcttac cgttatttct ctaccgagaa gcgtaaattt attatcgccg
    10201 acaccccagg gcacgagcag tacactcgca atatggcaac tggcgcatcg acatgtgaac
    10261 tggcgatctt actgatcgat gcccgtaaag gcgtgctcga tcaaacccgt cgtcacagtt
    10321 ttatctccac actgttgggg atcaaacatc tggtcgtggc gatcaacaaa atggatctgg
    10381 tggattacag tgaagagacg ttcacccata ttcgtgaaga ttatttgacc tttgccgggc
    10441 agctgccggg taatctggat atccgctttg tgccgctctc tgcactggaa ggcgacaacg
    10501 tggcatcgca aagtgaaagt atgtcgtggt acagcggtcc gacactgctc gaagtgctgg
    10561 aaaccgtgga gatccagcga gtggtggatg cccagccaat gcgcttcccg gtgcagtacg
    10621 ttaatcgccc gaatctcgat tttcgtggct acgccggaac gctggcatcc ggtcgcgtgg
    10681 aagtcgggca acgtgtcaaa gcgctgccct ctggtgtgga atcaaacgtc gcgcggatcg
    10741 tgacttttga tggtgatcgc gaagaagcct ttgccggaga agcgatcacc ctggtgctga
    10801 cggatgagat cgacatcagc cgtggcgatc tgctgctggc ggcagacgaa gcgttaccgg
    10861 cggtgccgag cgcgtcggtg gatgtggtat ggatggcgga acagccgctt tccccgggcc
    10921 agagttacga catcaaaatt gccggtaaga agacgcgcgc gcgtgttgat ggcattcgct
    10981 atccggttga tattaataac cttacccagc gtgaagttga aaacctgcca ctgaatggga
    11041 tcggcctcgt ggatctcact tttgacgagc cgctggtgtt agatcgttat caacaaaatc
    11101 cggtgacggg tgggctgatt tttatcgatc gcctgagcaa cgtgactgtt ggtgccggta
    11161 tggtgcatga gccgaaaaac gaggccgccg ttgcgtcatc tgaattcagt gcattcgaac
    11221 tggaattgaa tgccctggtt cgtcgccact ttccgcactg gggcgcgcgc gatttgctgg
    11281 gggataaata atggcgctgc atgacgaaaa cgtcgtctgg catagccatc cggtcactgt
    11341 gcaacaacgc gagctacacc acggtcatcg tggtgtagtg ctgtggttta ccggcctctc
    11401 tgggtccggt aaatcaacgg tcgccggggc gctggaggag gcgttacata aactcggcgt
    11461 cagtacgtat ctgctggatg gcgacaatgt tcgccacgga ttatgcagcg atctcggttt
    11521 tagcgatgcc gatcgtaaag agaatatccg tcgcgtcggt gaagtggcga atttgatggt
    11581 tgaagccgga ctggtggtgc tgaccgcatt tatctcgcca caccgcgccg aacgccagat
    11641 ggttcgcgaa cgcgtaggag aagggcgctt tatcgaagtg tttgtcgata cgccgctggc
    11701 gatttgcgaa gcccgcgatc ccaaaggctt atataagaaa gcgcgtgccg gtgaactgcg
    11761 caactttacg ggaatagatt ccgtttacga agcgcctgaa tcggcagaaa ttcatctcaa
    11821 tggtgaacaa ttagtaacaa atttggtaca gcaattatta gatctgttga gacagaacga
    11881 tattatcaga tcctgagaca ccaccgggtt tccatgcccg gttcgtcaaa gtaacaggat
    11941 caaatatgcg taatagccat aacattacac taacaaataa cgacagcctt actgaggatg
    12001 aagaaaccac atggtcactg cctggtgccg tggtcggttt tatctcctgg ttatttgcgc
    12061 tggcgatgcc gatgttgatt tatggctcta acacgctgtt cttctttatc tacacctggc
    12121 ctttctttct ggcactgatg cctgtcgcgg tagtggtggg gattgcgctg cattcattga
    12181 tggacggaaa gctacgctac agtattgttt tcaccctggt gacagtaggc attatgtttg
    12241 gcgcactgtt tatgtggcta ctgggctaat ttgtactttc ttgtctcctc tgttcataat
    12301 tcaaaccgta actaataatg agattatgtt ctgcacgccc taggtatacg taacaatgga
    12361 caaatgtggt acatttgccc gcgttgtcgc ggtatcccca acagaggatg tagagtcgtc
    12421 ttcggatgca tgggatgatg atgccgtttt tcagggggca ggatgggtaa actaacgctg
    12481 ctgttgctgg ctattctggt ctggctacag tattcgctgt ggttcggtaa gaacggtata
    12541 catgactata cccgcgtcaa tgatgatgtg gcggcacagc aagctacaaa cgcgaaactt
    12601 aaagcgcgaa acgatcaact ttttgccgaa attgacgatc tcaatggcgg ccaggaggcg
    12661 ctcgaagagc gtgcgcgtaa tgaactcagc atgaccaggc cgggcgaaac tttttatcgt
    12721 ctggtgcctg acgcgtcgaa gcgcgcacag tctgcggggc aaaacaatcg ataaatcagc
    12781 ccgggaatta acatggcaac cactcatttg gatgtttgcg ccgtggttcc ggcggccgga
    12841 tttggccgtc gaatgcaaac ggaatgtcct aagcaatatc tctcaatcgg taatcaaacc
    12901 attcttgaac actcggtgca tgcgctgctg gcgcatcccc gggtgaaacg tgtcgtcatt
    12961 gccataagtc ctggcgatag ccgttttgca caacttcctc tggcgaatca tccgcaaatc
    13021 accgttgtag atggcggtga tgagcgtgcc gattccgtgc tggcaggttt gaaagccgct
    13081 ggcgacgcgc agtgggtatt ggtgcatgac gccgctcgtc cttgtctgca tcaggatgac
    13141 ctcgcgcgat tgttggcgtt gagcgaaacc agccgcacgg gagggatcct agccgcacca
    13201 gtgcgcgata cgatgaaacg tgccgaaccg ggcaaaaatg ccattgctca taccgttgat
    13261 cgcaacggct tatggcacgc gctgacgccg caatttttcc ctcgtgagct gttacatgac
    13321 tgtctgacgc gcgctctaaa tgaaggcgcg actattaccg acgaagcctc ggcgctggaa
    13381 tattgcggat tccatcctca gttggtcgaa ggccgtgcgg ataacattaa agtcacgcgc
    13441 ccggaagatt tggcactggc cgagttttac ctcacccgaa ccatccatca ggagaataca
    13501 taatgcgaat tggacacggt tttgacgtac atgcctttgg cggtgaaggc ccaattatca
    13561 ttggtggcgt acgcattcct tacgaaaaag gattgctggc gcattctgat ggcgacgtgg
    13621 cgctccatgc gttgaccgat gcattgcttg gcgcggcggc gctgggggat atcggcaagc
    13681 tgttcccgga taccgatccg gcatttaaag gtgccgacag ccgcgagctg ctacgcgaag
    13741 cctggcgtcg tattcaggcg aagggttata ccctgggcaa cgtcgatgtc actatcatcg
    13801 ctcaggcacc gaagatgttg ccgcacattc cacaaatgcg cgtgtttatt gccgaagatc
    13861 tcggctgcca tatggatgat gttaacgtga aagccactac tacggaaaaa cttggattta
    13921 ccggacgtgg ggaagggatt gcctgtgaag cggtggcgct actcattaag gcaacaaaat
    13981 gattgagttt gataatctca cttacctcca cggtaaaccg caaggcaccg ggctgctgaa
    14041 agccaatccg gaagactttg tggtggtgga agatttgggc tttgagcctg atggtgaagg
    14101 tgagcatatt ctggttagaa tcctcaaaaa cggctgcaat acccgttttg tggcggatgc
    14161 actggcgaaa ttcctgaaaa ttcatgcccg tgaagtcagc ttcgctgggc aaaaagacaa
    14221 acatgctgtt acggaacagt ggttatgcgc tcgcgtgcca ggcaaggaaa tgcccgatct
    14281 gagcgccttt caactggaag gctgccaggt gctggagtat gcgcggcaca agcgcaagct
    14341 gcgtttaggc gcgctgaaag gtaacgcctt taccctggtt ctacgcgaag tgagcaatcg
    14401 cgatgacgtt gaacaacgtc tgatcgatat ttgcgtaaaa ggtgtaccga actacttcgg
    14461 tgcccaacgt tttgggattg gcggtagcaa cttgcagggc gcgctgcgct gggcgcaaac
    14521 caatactccg gtgcgcgatc gcaataaacg gagtttttgg ttgtcggcag cccgcagtgc
    14581 gttgtttaat cagattgttg ctgagcgcct caaaaaagca gacgttaatc aagttgttga
    14641 cggcgatgcg ctacaattag ccggacgtgg tagctggttt gtagcaacca ccgaagaact
    14701 ggcggaatta cagcatcgcg tcaacgataa agagctgatg ataaccgccg cattgccggg
    14761 cagtggcgaa tggggaactc agcgtaaagc gctggcattc gaacaagcag ctgtcgccgc
    14821 agaaactgaa ttacaagctt tactggtgcg cgaaaaagtt gaagccgcgc gcagagcgat
    14881 gctgctgtat ccgcaacaat taagctggaa ttggtgggat gacgtcaccg tagagatccg
    14941 tttctggctt ccggcgggta gttttgcaac cagcgttgtc agggaactta tcaacacaac
    15001 aggtgattat gcgcatattg ctgagtaatg atgacggggt acatgcaccc ggtatacaaa
    15061 cgctggcgaa agccttgcgt gagtttgctg acgttcaggt ggtcgccccc gatcgtaacc
    15121 gcagcggcgc ttcaaattct ctgacactgg aatcctccct gcgcacgttt acctttgaaa
    15181 atggtgatat tgctgtgcaa atgggaaccc cgaccgattg cgtctatctt ggcgtgaatg
    15241 ctctgatgcg tccgcgcccg gacattgttg tgtccggcat taacgccggg ccgaatctgg
    15301 gggatgacgt tatttattcc ggtacggtag ccgccgcgat ggaaggccgt catttaggtt
    15361 ttccggcgct ggccgtctcg cttgacgggc ataaacatta cgacactgcc gcggcggtaa
    15421 cctgttcaat tttgcgcgca ctgtgtaaag agccgctgcg caccggacgt attcttaata
    15481 ttaacgttcc ggatttaccc ttggatcaaa tcaaaggtat tcgcgtgacg cgctgcggta
    15541 cacgacatcc ggcagatcag gtgatcccgc agcaagatcc gcgcggcaat acgctgtact
    15601 ggattggccc gccgggcggt aaatgtgatg ccggtccggg gaccgatttt gctgcggtag
    15661 atgagggcta tgtctccatc acgccgctgc atgtggattt aactgcgcat agcgcgcaag
    15721 atgtggtttc agactggtta aacagcgtgg gagttggcac gcaatggtaa gcagacgcgt
    15781 acaagcactt ctggatcaat tacgtgcgca aggtattcag gatgagcagg tgctgaatgc
    15841 acttgctgcc gtgccgcgtg aaaaattcgt tgatgaagcg tttgaacaaa aagcctggga
    15901 caatatcgcc ttgccgatag gtcaggggca gacaatttcg cagccgtata tggtggcgcg
    15961 aatgaccgaa ttactcgagc tgacgccgca gtcgcgggtg ctggaaattg gcaccggttc
    16021 gggatatcaa acggcaatcc tggcgcatct tgtccagcat gtttgctcgg tcgaacggat
    16081 taaaggtttg cagtggcagg cgcgtcgccg cctgaaaaat cttgatttac ataatgtttc
    16141 aacccgtcat ggcgatggat ggcaaggttg gcaggcacgc gcgccgtttg acgctatcat
    16201 tgttacggcg gcaccgccgg aaattccaac tgcgctaatg acgcagctgg acgaaggcgg
    16261 gattctcgtc ttacccgtag gggaggagca ccagtatttg aaacgggtgc gtcgtcgggg
    16321 aggcgaattt attatcgata ccgtggaggc cgtgcgcttt gtccctttag tgaaggggga
    16381 gctggcttaa aacgtgagga aatacctgga tttttcctgg ttattttgcc gcaggtcagc
    16441 gtatcgtgaa catcttttcc agtgttcagt agggtgcctt gcacggtaat tatgtcactg
    16501 gttattaacc aatttttcct gggggataaa tgagcgcggg aagcccaaaa ttcaccgttc
    16561 gccgcattgc ggctttgtca ctggtttcgc tatggctggc aggctgttct gacacttcaa
    16621 atccaccggc accggtcagc tccgttaatg gcaatgcgcc tgcaaatacc aattctggta
    16681 tgttgattac gccgccgccg aaaatgggga cgacgtctac agcccagcaa ccgcaaatcc
    16741 agccagtgca gccagtagct cagcagccgg tacagatgga aaacggacgc atcgtctata
    16801 accgtcagta tgggaacatt ccgaaaggca gttatagcgg cagtacctat accgtgaaaa
    16861 aaggcgacac acttttctat atcgcctgga ttactggcaa cgatttccgt gaccttgctc
    16921 agcgcaacaa tattcaggca ccatacgcgc tgaacgttgg tcagaccttg caggtgggta
    16981 atgcttccgg tacgccaatc actggcggaa atgccattac ccaggccgac gcagcagagc
    17041 aaggagttgt gatcaagcct gcacaaaatt ccaccgttgc tgttgcgtcg caaccgacaa
    17101 ttacgtattc tgaatcttcg ggtgaacaga gtgctaacaa aatgttgccg aacaacaagc
    17161 cagctgcgac cacggtcaca gcgcctgtaa cggtaccaac agcaagcaca accgagccaa
    17221 ctgtcagcag tacatcaacc agtacgccta tctccacctg gcgctggccg actgagggca
    17281 aagtgatcga aacctttggc gcttctgagg ggggcaacaa ggggattgat atcgcaggca
    17341 gcaaaggaca ggcaattatc gcgaccgcag atggccgcgt tgtttatgcc ggtaacgcgc
    17401 tgcgcggcta cggtaatctg attatcatca aacataatga tgattacctg agtgcctacg
    17461 cccataacga cacaatgctg gtccgggaac aacaagaagt gaaggcgggg caaaaaatag
    17521 caaccatggg tagcaccgga accagttcaa cacgcttgca ttttgaaatt cgttacaagg
    17581 ggaaatccgt aaacccgctg cgttatttgc cgcagcgata aatcggcgga accaggcttt
    17641 tgcttgaatg ttccgtcaag ggatcacggg taggagccac cttatgagtc agaatacgct
    17701 gaaagttcat gatttaaatg aagatgcgga atttgatgag aacggagttg aggtttttga
    17761 cgaaaaggcc ttagtagaag aggaacccag tgataacgat ttggccgaag aggaactgtt
    17821 atcgcaggga gccacacagc gagtgttgga cgcgactcag ctttaccttg gtgagattgg
    17881 ttattcacca ctgttaacgg ccgaagaaga agtttatttt gcgcgtcgcg cactgcgtgg
    17941 agatgtcgcc tctcgccgcc ggatgatcga gagtaacttg cgtctggtgg taaaaattgc
    18001 ccgccgttat ggcaatcgtg gtctggcgtt gctggacctt atcgaagagg gcaacctggg
    18061 gctgatccgc gcggtagaga agtttgaccc ggaacgtggt ttccgcttct caacatacgc
    18121 aacctggtgg attcgccaga cgattgaacg ggcgattatg aaccaaaccc gtactattcg
    18181 tttgccgatt cacatcgtaa aggagctgaa cgtttacctg cgaaccgcac gtgagttgtc
    18241 ccataagctg gaccatgaac caagtgcgga agagatcgca gagcaactgg ataagccagt
    18301 tgatgacgtc agccgtatgc ttcgtcttaa cgagcgcatt acctcggtag acaccccgct
    18361 gggtggtgat tccgaaaaag cgttgctgga catcctggcc gatgaaaaag agaacggtcc
    18421 ggaagatacc acgcaagatg acgatatgaa gcagagcatc gtcaaatggc tgttcgagct
    18481 gaacgccaaa cagcgtgaag tgctggcacg tcgattcggt ttgcaggggt acgaagcggc
    18541 aacactggaa gatgtaggtc gtgaaattgg cctcacccgt gaacgtgttc gccagattca
    18601 ggttgaaggc ctgcgccgtt tgcgtgaaat cctgcaaacg caggggctga atatcgaagc
    18661 gctgttccgc gagtaagtaa gcatctgtca gaaaggccag tctcaagcga ggctggcctt
    18721 ttctgtgcac aataaaaggt ccgatgccca tcggaccttt ttattaaggt caaattaccg
    18781 cccatacgca ccaggtaatt aagaatccgg taaaaccgag aatggtcgtt aacactgtcc
    18841 aggttttcag accgtctgct accgacaacc ccagatattt ggtcacaatc cagaaccctg
    18901 agtcattaat atgtgacgcg ccaagcccac caaagcaggc tgccagcgtc accaatacgc
    18961 actgaatcgg attcaatccc atcaccgctt ctgagagtaa cccgccggtt gtcaggattg
    19021 ctacggttgc tgacccctgc gatgcacgca gagccagtga aataataaat gcggctggta
    19081 acagaggcag gtcaatcatt tgtagcatat tggcaagggc tttgccgacg cccgattcca
    19141 ccagcacttt gccaaatacc cctccagcac cagtaaccaa aatcactacc gccgcagtgg
    19201 gaagggctga gcccataatg tcgctggtgt gttgtaagct ccagccgcga cgtaaagcca
    19261 ataaccagaa tgccagcacc agcgcaatca ttagagctac cattggtgag ccgatcagct
    19321 gtagcgtacc aagcagggga tgcgaaggcg gcatcagtgt tgcggaaacc gtacccgtca
    19381 tgataatcgc gataggaata acaattagcg aggtgaccag cgcgacgccc ggtggattta
    19441 ttttatcgct taattttgtc gcgccttcct cactggccgg agccagttgc atctgttcca
    19501 gtacttctac tgacatcgca tattggcgct tattgattat tttcgctgca aagtagccaa
    19561 caatccctac gggaatagaa atcgcaatac cgatgatggt tagccagccg atgtctgcgt
    19621 ggagtaaccc cgctgtggcg acagggcctg gatgcggcgg tactgccaca tgaacagtta
    19681 gcatgattcc agcgacaggc aggccaaatt tgagtggcga tattttggca accttggcaa
    19741 aaccgtaaat gattggcgca agaataataa agctgacatc aaagaagacg ggaataccga
    19801 ggaagaacgc tgccagagtc agcgcagcga tagttcgttt gtcacctaac ttgcgactga
    19861 aataattagc cagtgactct gcaccaccag agtgttcgat catacgcccc agcatagcgc
    19921 ccagaccaat aataatagtg acggaaccaa gcacaccgcc catcccggcg atcatcactt
    19981 tacccacttc gcccgccggt atacccgccg caagtgcgac taacaggctg acgaggagca
    20041 gagcaacgaa tggttgtacc tttgccttga tgaccagcag caacagcatg attacgccag
    20101 ctaacgcaat gcataacaat gtaattgtgg acatgggaaa ccctgtctga aagttatagt
    20161 taacctaccc catccgtaga tggggggatg tatgggtacg ttgtaattag ggatttaacg
    20221 aattagcgcc aggcgtcaaa ccagccaagc ccttcttcgg tgaggccacg aggtttatat
    20281 tcacaaccga tccagccctg atatcccacc tcatcgaaca ggcggaacag ccacggatag
    20341 ttgatttctc catcgtccgg tcatgtcgat caggtagtcc ggcaatttgt acgtgcgcat
    20401 atttcccagc gtagtcgcgg attaaatgcg tcaggttgcc atctactttt tgcgcatgaa
    20461 aagtatctag ttgaataaac acgttatctc gcgcaacctc ttcaacaata gccagtgcct
    20521 gatactggct ggagaagaga taatgaggct taacgtcggg gctgagtgct tcaactaata
    20581 ttcgcttgcc gtgtggcgca aagcggtcgg cagcgtagcg gagattatcg ataaatactg
    20641 cccggtaccg ttcagcatct tcgccagcgg gcacgacgcc tgccatcaca tggacttgtt
    20701 cacaattgag cgccaatgca tattccagtg ccaggtcgat gtctgcgtgt gcttcgtgct
    20761 cacgtccggg aagggcggat aatccccatt cccccgcatt aatatctccg ggagcggtat
    20821 tgaacagcgc cagtgtcaga tggttttgct ccagttgctt ttggatttgc agggtggagt
    20881 agtcataggg aaacagaaat tccacagcat cgaacccggc ttttcgcgct gcggcgaagc
    20941 gttcaataaa aggcacttcg gtgaacatca tggataaatt agctgcaaaa cgaggcattg
    21001 cattaactcc ttaattccgc aatttcacct gcggtcagat aacggatcgg gcggtcaccg
    21061 agaataaaaa tcagctttgc cgtttcctcc agctcttcca tattgttggc ggcttcttgc
    21121 aggctttcac cgcaaaccac tgggccatga tttgccagta aaaaagcctg attgtctgct
    21181 gccagttccg ccagatcctg tgcgatgcgt ttatcgcccg gtcggtaata gggcaccagc
    21241 gggacatttc ccatccgcat caccacgtat ggtgtgaacg gacgaataac gttgctgctg
    21301 tccagccctt gcaggcagga aagcaccgtc gaccatgtgc tgtgcaaatg caccaccgct
    21361 ttacagcgcg gattgttgcg atacagcgcc agatgaaaga gcacctcttt cgagggtttg
    21421 tcaccactta accattcgcc atccgcggcg actttggaaa gccgctgcgg atcgagattg
    21481 cccaggcatg aacctgtcgg tgtcgccagt aaattcccgt caggtaaaag cagcgacaga
    21541 ttgccagccg aaccggttgc atagccgcgc tgaaagaatg aactggcaat ccgcgtcatc
    21601 tcctctcgca aagactgctc tacttttgcg aaatcgctca tgataaaaac tctctttggg
    21661 ctcgtgaaaa aaaggcttca tcaccgaagt tgccagattt aagggcgagt gagacaggct
    21721 tatccagtgc gtttacccac ggcacgccgg gggaaatggt tgggccaata tgaaaccctt
    21781 ttatgcccag gctctgtgtg actacgccgg aggtctcacc gcctgcgaca ataaagcgtg
    21841 tcacgccttc cgctgctaac cgcgccgcta gttgagaaaa cagagtttct actgcctgac
    21901 tggctttttg tgcaccgtat tgctgttgaa ttgctgccaa tgcgtcagtg ctggcggtgg
    21961 caaaaaccag tggagcaagt acactttcct ggcccagaac ccactctgcc agttcgtgtg
    22021 cataagcggc cagagtttcg gttgagaggc agcgtgccac atcaacttca cgggctggtg
    22081 caatttgacg gtaatgtgcc acctggcggt tggtcatttg agagcatgaa ccggagagca
    22141 ctacgccgcg cccagcgagc ggatgccctg cttcgcgagc ctggttaccg ttttcttgcg
    22201 cccactgccg ggccaggcca atcgccagac cagaaccgcc cgttaccagt ggggcatcgc
    22261 gcaaggcttc tccctgaatt tccagatggt gttcggtcag cgcatcaagc accgcgtagc
    22321 ggtagccctc ttgctgtaag cgagccagct cttgacgaac ggcatccaca ccttgttcga
    22381 aaacatgtgc cgaaacgacg ccgcagcgcc ctgtggattg cgcttcaacc agacggggaa
    22441 gatagctgtc ggtcatggga tttaccgggt gatggcgcat cccggattcg gccagcagtt
    22501 gattcattac gaacaaatac ccctgataaa ccgtacgtcc gttgaccgac agggccggag
    22561 agaagaccgt aaacggcgtg tcgagagcat ccattaatgc atcggtaacc gggccgatat
    22621 tacctttcgc cgtactgtcg aaagtagagc agtatttgaa atagatctgt ttgcaacctt
    22681 gctgttgcaa ccagctcaga gccgccagcg attgctgtgt ggcttcaacc accggacagg
    22741 agcgcgtttt caggctgatc accagtgcgt cgattgcttc cggcatttta cctgttggaa
    22801 caccgttaat ttgtaccgtt ggtagaccgt tttccaccag aaaactggcg atatccgtcg
    22861 cgccggtaaa atcatcggcg ataacgccaa tcttgatcat gatttcgctc ccggtagagt
    22921 gatgccagag aaaatcttga taactgcgct atcgtcttct ttcccgtaac ctgcgttact
    22981 ggcgctggtg aacatattca atgctgttga ggccaatggc agcgggaagt gcagggcttt
    23041 ggctgtatcg gcaaccagac caagatcctt aacaaaaata tcgacggctg aatgcggggt
    23101 gtaatcgcca tccaccacat gacgcatccg gttttcgaac atccaggaat ttccggcggc
    23161 attggtcacg acgtcataca tcacatccag cgggatcccc gcacgggctg caagtgccat
    23221 cgcttcggct ccggcagcaa tatgtacgcc cgctaacaac tggtgaataa tttttacggt
    23281 cgaacctagt cccggttctg cacctatgcg ataaactttt ccggcaacgg cttccagcac
    23341 gggtgccagt cgttcaaagg caatatcgct accggaggcc atgacagtca tttcaccgtt
    23401 agcggctttt actgcatcac cagaaactgg cgcatccagc atttccagat cgaatccagc
    23461 cagagcggta gcaatttctt gcgcatcagc actagcgata gtggaagaaa ccattactgc
    23521 cgtaccgggt ttcagatgtt gtgcaacgcc tgtttcacca aacagcacct gtttaacctg
    23581 ggccgcattg accaccagca ccagcagagc gtccagtttt tcggcaaacg tcgcggcgtt
    23641 atcagaaacc ccgcaagcac ctgcctcttt caacgtagcg caggcattgc tgttcaggtc
    23701 tgcgccccag gtagaaagac ctacgcggac acatgacagt gctgctccca ttcccattga
    23761 ccctaagcca acgataccga catgaaactc agatcccgtt ttcatctgct ctccttgtta
    23821 atttaagtga tattttgttt gatattgtga atataagcgc tggaagataa cgatatggtg
    23881 agcctattca cataaattaa cattgtgtgt tattttatgt gaactaagcg ttagttgcgc
    23941 cgcgcacgtt tcgcaggcaa atagcgtaga atgtcagcag gacaaaggaa ggagcaaaag
    24001 ttgatacccg tagagcgtcg ccaaatcatc cttgagatgg tagctgaaaa aggcattgtc
    24061 agtattgctg aactaacgga cagaatgaat gtatcacata tgaccattcg tcgggattta
    24121 caaaaactgg agcagcaggg agccgttgtg ctggtgtccg gaggcgtcca gtctccggga
    24181 cgcgtggcgc atgaaccttc tcatcaggta aaaactgcgc tagcaatgac gcaaaaagcg
    24241 gctattggca agctggcggc aagtcttgtt cagccgggaa gttgtatcta tctggatgcg
    24301 ggaacgacca cgttagcgat agcacagcat ctgattcaca tggagtcact gactgtggtc
    24361 acaaacgatt tcgttattgc gaactacttg ctcgacaaca gtaattgcac aattattcac
    24421 actggcggtg cagtgtgtcg ggaaaaccgt tcctgtgtcg gggaagccgc tgcgaccatg
    24481 ctgcgcagcc tgatgattga tcaggctttt atttctgcat cgtcatggag tgtgcggggg
    24541 atttctacgc cagcggaaga taaagtcacg gtgaaacggg cgattgctag tgccagccgc
    24601 cagcgagttt tggtctgtga tgcgacgaaa tatggtcagg tggcgacatg gctggcgtta
    24661 ccattaagcg agtttgatca gattattaca gacgacggtt tgccggagag tgccagtcgc
    24721 gcgctggcga agcaggatct ctctttgctg gtagcgaaaa atgaataatg gcctgcaata
    24781 acatctggtt actcatgctt cacagaagaa gcatgagact accttatttt ataaaatgac
    24841 agccgcccac ttttcggcga tccggtatca atataaatct ggttagcgaa cgtctgaatg
    24901 ttatcaaaca tcatatgtcc aaatataaaa taatcagcgc cgtttatttg ttgtaactcg
    24961 ccattaagcg atttctgcac acgataaaca ggccagagta attcgctctc cgctatttct
    25021 ttgccaaaga gatattcatc acccggataa tctgcatgtg cgatgacata ttttattatg
    25081 tcgttagtga tttcaataat atgtggaagg tgatggaatt tcagcaacag atctattgcc
    25141 tcttgttgct ctgaatcatt taaatcgaaa aaccagtcac caccgctggc aagccacata
    25201 ttgccatcgc cggtcgcgaa cgcatccagc tccattgctt cgtggttgcc tttaacggag
    25261 ataaaccagg gctggtttag caggcgcagg acgtcaagac tctccggccc acgatcaata
    25321 ttatcgccga cagaaataag taagtcggtt tcagggcaaa aagagagttg atgtaagcgg
    25381 gattgtaata attgatattc accatgaata tcaccaacga cccatatatg gcgatagtga
    25441 tgggcattaa ttttttgata gcgtgtagat ggcatggttt taccctgtaa aataagcttt
    25501 cctattatac agggggtttt tattttattc gtcagttgtc gttaatattc ccgatagcaa
    25561 aagactatcg ggaattgtta ttacaccagg ctcttcaagc gataaatcca ttccagcgcc
    25621 tgacgcggag tcagtgaatc cgggtccagg ttttccagag cttcgaccgc tggcgaggtt
    25681 tcttccggta ctgacagcaa agacatttgc gtaccatcca cttgcgtagc ggcggcgttc
    25741 ggcgaaatgc tttccagctc acgcagtttt tgccgtgcgc gcttaatcac ctcttttggc
    25801 acgcctgcca gagctgcaac cgccaggccg tagcttttgc tcgccgcgcc atcctgcacg
    25861 ctatgcataa aggcaatggt gtctccgtgc tccagcgcat cgagatgcac gttggcgacg
    25921 tcttccattt tctccggtag ctgggtcagc tcgaaatagt gggtggcaaa cagcgtcaat
    25981 gccttaatct tattcgccag attttctgcg cacgcccacg ccagcgacag accatcgtag
    26041 gtggacgttc cacgcccgat ctcatccatt aacaccagac tgtattcggt ggcgttatgt
    26101 aaaatattgg cggtttcagt catctccacc ataaaggttg agcgcccgga agccaggtca
    26161 tctgccgcgc ctacgcgggt aaagatgcga tcgataggtc caatctcgac tttttgtgcc
    26221 ggtacatagc tgccaatgta ggccatcagc gcaatcagtg cggtctggcg catataggta
    26281 cttttaccgc ccatgttcgg gccggtaata atcaacatac ggcgctgcgg cgacagattc
    26341 agcgggttag cgataaatgg ctcattcagt acttgttcaa ctaccggatg gcgaccttcg
    26401 gtaatgcgaa tgcccggttt atcaatgaag gtcgggcagg tgtagttcag ggtataggcc
    26461 cgttccgcca ggttaaccag cacgtcgagt tccgccagcg cgctcgcgct ctgttgcaac
    26521 gcttccagat gcggcaacag caggtcgaac agctcttcat aaagctgttt ttccagtgcc
    26581 agtgctttgc cttttgaggt gagaacttta tcttcgtact cttttagctc tggaatgatg
    26641 tagcgctcgg cgtttttcag cgtctggcga cgcatgtagt tgatgggtgc cagatggctt
    26701 tgcccacggc tgatttgaat gtagtagccg tgcaccgcat taaagccaac tttcagcgtg
    26761 tccaggccgg tacgttcacg ctcgcggact tccagacgct ccagataatc ggtcgcgccg
    26821 tcagccagcg cgcgccactc atccagctct tcgttatagc ccgatgcgat aacaccaccg
    26881 tcgcgtacca gcaccggcgg tgtgtcgatg attgctcgct ccagcagatc gcgcagctcg
    26941 gcaaactcgc ccatcttctc acgtagcgcc tgtaccggtg cactatcgac agtttctaac
    27001 tgtgcacgca gctccggcag ttgctggaaa gcgtggcgca tacgggccag atcgcgtggg
    27061 cgagcagttc gtaaagccag acgtgccaga atacgttcaa ggtcgccgac ctgacgcagt
    27121 accggctgta gcccggcggt gaaatcctgc aatgcgccaa tagtttgctg gcgctcaagc
    27181 aacacgcggg tatcgcgcac tggcatatgc agccagcgtt tcagcatacg actacccatc
    27241 ggcgtgacgg tgcagtcgag cacagaagcc agcgtatttt ccgcaccgcc cgccaggttc
    27301 tgagtaattt ccaggttacg acgtgtcgcg gcatccataa tgatgctgtc ctgctcacgt
    27361 tccatggtga tagaacgaat atgcggcagg gtcgtgcgtt gggtatcttt cgcatactgc
    27421 aacagacaac cggcagcaca aagtccgcgc ggcgcgttct cgacgccaaa accgaccaga
    27481 tcgcgggtgc caaattgcag attcaactgc tggcgcgcgg tgtcgatttc aaactcccac
    27541 agcgggcgac ggcgcaggcc gcgacggcct tcaatcagcg acatctcggc gaaatcttct
    27601 gcatacagca gttccgccgg attagtgcgt tgcagctctg ccgccatcgt ttcgcggtcg
    27661 gccggttcgc tcaggcgaaa acgcccggag ctgatatcca gcgtcgcgta gccgaaacct
    27721 ttgctgtcct gccagatagc cgccagcagg ttgtcctgac gctcctgtaa cagggcttca
    27781 tcgctgatgg tgcctggcgt aacgatacgc acaactttgc gctcaaccgg acctttgctg
    27841 gtcgccggat cgccaatttg ttcgcagatg gcaacggact ctccctgatt caccagtttg
    27901 gcgagatagt tttccaccgc atggtaggga atccccgcca tcgggatcgg ctctcccgcc
    27961 gaagcaccgc gtttggtcag tgaaatatcc agcagttgcg acgcgcgttt tgcgtcgtca
    28021 taaaacagtt cataaaaatc acccatccgg taaaacagca ggatctcggg atgctgggct
    28081 ttcagcctga gatactgctg catcatgggc gtatgggcgt cgaaattttc tattgcactc
    28141 atggggttat gtccggttcc ctgatattaa atggggtgtg atggttttta ttttcgttgt
    28201 aatcacataa ggcgcacatg ataccggagt taatcatttc aggggaagaa gcgaacggcg
    28261 agttcttgat gctggttccg ggaaagatgc tgttttgcag cttttgcgtg atgcttatga
    28321 agcaagtacg caaaattgcg tcggttgaat aaacctcctc cttcagagcc atagtcccct
    28381 ttcaaattaa gttgtaatat aaatacacct taagagtatg gaggcagcat gtccggcaag
    28441 cgtatctctc gtgaaaaact gacgattaaa aaaatgatcg atctttatca agcgaaatgc
    28501 ccgcaggcgt cagcggagcc ggagcattac gaggcgttgt ttgtttacgc gcaaaagcgg
    28561 ctggataaat gtgtgttcgg cgaagagaaa ccagcctgta agcagtgtcc ggtgcactgt
    28621 taccagcctg caaagcgtga agagatgaaa cagattatgc gttgggccgg gccgagaatg
    28681 ctgtggcgtc atccgatctt aaccgtgcgt catctcatcg atgacaagcg tccggtgcca
    28741 gaactgccgg aaaaatatcg tccgaaaaaa cctcgtgaat agtatgccgg acaggcagat
    28801 ctgtccggca atttgcagtt aaatcaatgc cgatttatca attcccagcc gcttcatccg
    28861 tgacagcagg gtcgtgcgtt tcagccccag acgttgcgca gcgcctttag gcccggcaac
    28921 cacgccgttg gtttctttca gcacgcgaac aatcaactga tattcatctt cgccctcctg
    28981 agcgacaacc gttgcggcag gcggcgtttc aggctccggt aaagcaatat ctggcaatga
    29041 cagctgcagc acgttgccgc gtgttagcaa tactgcgcgc tcaatgacgt tttccagttc
    29101 gcgtacgtta cccggccact ccatgttgct caaggtgcgc agcgtctcgg ctggaatgct
    29161 gtcgatattg cgccccagac gacgggcaat tttgaaggta aaggctttcg ccagcagcgg
    29221 aatatcttcc ggacgctcgc gtagtggcgg caggtgaatc gggaatacgt tcaggcggta
    29281 atagagatcg ctacggaact ctcggtcggc gaccattttt ttcagatcgc ggttagtcgc
    29341 ggcaattaaa cgtacgtccg tctgaatgat tttgttgctg ccgagacgtt caaactcctg
    29401 ttcctgcaat acacgcagca acttcggctg taactccagt ggcatatcgc ccacttcgtc
    29461 gaggaacagg gagcttttat ccgccagttc aaaacgacca atgcgctggg cgctggcacc
    29521 ggtaaaagcc ccacgctcat gaccaaacag atcgctttcc agcaatccgg caggcatcgc
    29581 cgcgcagttc attttgacca tgcggcgatt attacgccca ctgagattat ggatcgcgcg
    29641 ggcaatcagc tctttacccg tgccagtttc accgaggatc agcacggtac tgtcactttg
    29701 cgccaccatt tcaacttgtt taagcacgct gtacatggct tcgctgcggc caataatctc
    29761 gccaaattca ctatcaacat tgttgagctg ctcggtcagg gcgaggtttt catcaaccag
    29821 ccgttctttc agacgatgga tttcctgata ggcgagggcg ttatcgacag cgattgccac
    29881 acgttcggca atctggcgca gcaaattcag attggtagtg gtaaacactt tctcttcgca
    29941 ttgcgccagt ttcagcacgc ccagcatggt gtcgccagac atcagcggta acaggcacaa
    30001 ggtttgaatc tggttgcccc aggtgtcgaa caacatgcgt tcataggggg ctaaatcgtc
    30061 ccgctcgtgg agattgatca gcagcatctc tttacttttg aacacgcgtt cggtgagggt
    30121 tccggcttca tcgacttcgc tctgttcgtg ggcgggatgt tgtttatcaa gatagtgagt
    30181 ggagtagatg ttgagtttgt ttttacggtg gctgcgtaag acgatactga tatcgtcaat
    30241 gtcgaaatag taatggattt ctttggcgac ttcgctgacc agttcgtcca tatccaggcg
    30301 ggaaagcacc gcgttggtaa tggcaaccag gatgcggaag ttatcgcgct cccggcataa
    30361 caactcatag tcgacattgt tgacgacgcg gctctggatt tgttcggtga cgacagaaac
    30421 gatctgcgta aatgtttgca gacgattgaa ctctttttcg ctccagggac gatcgtcata
    30481 acgaataaat tcacagccac caaaaatatg cccttccgcc gccagtggca tcaggcaata
    30541 gtgaccaaat taggggtata gcccaccagc gaccagctgc ggccaggttt cacaaaattc
    30601 ttcgtaactg caatgcagcg tatcagggcg cgacaaaatg cggcgtaccg gaccgtgtgc
    30661 cagaacagtt tcgtcttcat atttaatggg ggtgtctttt tcacgcgatg cgtaataaga
    30721 cgcacgttga gtctgcgctt gccacaacac aatagccgcg ttgtcggcga gcgcagaacg
    30781 ctttaccagt tgcgaaagag cctcacacag cgaggccaga tcgggctgct gcaatagtgt
    30841 ccgagtgatg tcgaacaacc cttgctgtcc gagatcactc atcggtgtat atgacatttt
    30901 gttcttccag gaaagcaccg caaagcggtg caaaaggtca ttgactaact ataggagatt
    30961 tagaatttta ttagcatata cgcggaagcg gttcggcgtg tggtaaatcg agggttcgtt
    31021 tcacaccata cagaccggca agacgaacac ctttacgttc caccacttca ccaattagcg
    31081 ccgcgtcttt ccccagtgga tgggaatgta acgctgccag cacttgctct gctgcgttgc
    31141 gttcaacagc tattactagt ttgccttcgt tggcaaagtt aagggcgtcc agtcccagca
    31201 gttcgcaaac gccgcgcaca gcaggtttaa ccggcagtgc tgattcagaa atttcaatac
    31261 cacaaccgca ggctgccgcg aactcatgaa ccaccgcgtt tacaccacca cgggtggcat
    31321 cacgcagcgc tttcacgccg ggaatgtcac gcagcgtctg aataagcggc gtcagcaccg
    31381 cgcagtcgct gaccagttca ccatccagcc ccagttgttc acgcaggtta aggatagtcg
    31441 ccccgtggtc gccgagtgta ccgctaacca gcaatacatc gcctgcggtt agcgtctgtg
    31501 cgccccagtg aatattcgcc ggaattgcgc ccatgccagc ggtgttgata aacagtttat
    31561 ctgccgcgcc gcgctgcacc actttagtat cgccagtaac gatggcaatg cctgccgtgc
    31621 gggcggtttc tgccatgctg gtcactacgg ctttcagtgt ctccatcggc aatccttctt
    31681 cgaggataaa gccacaggag agatagcacg gaatagcgcc actgaccgca acgtcattcg
    31741 cggtgccgca aatcgccagc ttgccgatat taccgccagg aaagaacagc gggtcaatga
    31801 cgtaactgtc ggtggagaac gccagacgat cgccttctgc taccagctgc gccagatcaa
    31861 gacgtgcctg gtcttcctgc tctgccagcc acgggttggc aaaggcttcc ataaacaggc
    31921 tgttgattaa ttgctgcatc gcctggccac cgctgccgtg ggcgagttgg atattattca
    31981 cgcttcactc tcctgctgac gatactgata ccacgcggcg cacgctcctt cggaggagac
    32041 catcagtgca ccaaatgcgg tttgaggatt acaggtgtta ccaaacagcg ggcattgatg
    32101 cggcttacat ttgcccgtta atacctcacc acaacgcgcg cgcgggtcat cgcagacctg
    32161 ctgcggtgcc gggcggaaat gtgcttcggc atcgaatcgt tgataatccg gcgtcaggtg
    32221 cacgccagaa gattcaatca cgcctaagcc gcgccattcg ctgtcgccgt tgacacagaa
    32281 cacatcggca atcgcctgtt gcgccagcag gttaccggca tccggtacca cccgacgata
    32341 ctgattctct accttgctgt gggccgctat tttctgctcc accagcatca ccacgccttg
    32401 cagtagatca aggggttcga aaccagcgac caccagcgga cgatgaaaat cgctggcgat
    32461 aaaattatag gcatcagtgc cgataaccat actaacgtgg cccggcgcga ggaacgcgtc
    32521 gataccgtta tccggctgtt ccagcaaact gcgcagcgtc gggataagcg taatgtgctg
    32581 gcagaagaag taaaaattct gcacatcacg cgctttcgcc tgttgcagag tgatggcggt
    32641 ggtcggcatg gtggtttcaa aacctaagcc gaagaacacc actttgcggg ttggattctc
    32701 ctgcgccagt ttcaacgcat ccatcggcga gtaaacgatg cgcacatcgg caccgcgtgc
    32761 ttttgcctgc aacagcgatc cctgtttccc tggtacgcgc atggcatcgc caaaggtaca
    32821 gaagatgact tccggatggc tggcaatctc cacgcaggtg tcgattctac ccatcggcag
    32881 tacgcacacc gggcaacccg gaccgtggat aaactcaacg ttttcaggca gtaactggtc
    32941 gaggccgaat ttaaaaatag cgtgggtatg accaccgcac acttccataa tccgcagagg
    33001 gcgttcggcg gtgtaagaga gatgtgaagc acgttcgcgc agatgctcaa ttaactgcat
    33061 cacctgttcc ggcgcgcgat attcatcaac aaaacgcatt atttttcctc gccatacaac
    33121 agcgcgccga catccggctc aacgtcaaac atgttttgta aggcgtcgag agtgtcgcgt
    33181 gcttcggctt cagtaattac gctcatggca aagccaacgt gtaccagtac ccactggccc
    33241 acgcgcggct gaccgttttc atcgcagctg ccgactaacg ttaaatcgac atcgcgctga
    33301 atgccgcaga cgtcgacttt tgcctggttg ccgtcaatgg tgcggatctg gccgggaacg
    33361 cctatgcaca tcgctgtgtc tccagccagt tcagccactg gtccatccct tcaccgctgg
    33421 tggcggaaat aaggatgatt tcaatttctg gattgacttc gcgggcgcag gcgatgcact
    33481 tctcaacgtc aaagttgaga tacggcaaca ggtcaacttt gttgagcagc atcagcgagg
    33541 cggcggcaaa catatgcgga tatttcagcg gtttgtcttc accttcggta acggaaagca
    33601 ccgccacttt gtgtttttca ccgagatcga agctggccgg gcatacgagg ttgccaacgt
    33661 tttcgataaa cagaataccg ttatcgtcca gtggcagacg cggtgcggcg tcggcaatca
    33721 tctgtgcgtc aagatggcag cctttacctg tgttcacctg aatcgctggt gtgccggtag
    33781 cgcgaatgcg tgcggcatcg ttcacggttt gctggtcacc ttcaataacc gcgcacggaa
    33841 cgctgtcttt caggcgcatt agggtttccg tcagcagggt ggttttaccg gaacctgggc
    33901 tggaaaccag gttgagcacc agttgcttgc gggcagcaaa gcgcgcgcgg ttgcgttcag
    33961 ccagacggtt gtttttgtcc agcacgtcaa tttcgacttc cagcatccga cgctggctca
    34021 tgcccggtgc gtgagtgccc gcttcgccat gaccgtaatg caggtcgcct tcttcagtct
    34081 ggctgggggt aaattcaggc gctttaatgc cggtgatttt catcttcggg cgtgccgccg
    34141 gggcaaatgg cgcgctacga aacgcggaat gagggttatg ttcatcaccc tcgatataca
    34201 ggttgccttc accgcaaccg catgttgtac acatcgctca ctcctggtct atttctatcc
    34261 gccgaatctg taaaccgtcg tctgccacaa tctgtagcat gtcaccatga cactgtggac
    34321 agcggcggac gcgctgggtc aatagcgtca catactgttg gcatgtttca caccagcatt
    34381 cgacctcttg ttcttcgagg tgcagtttac aaccttccgc cacgctgccg cggcaaacca
    34441 gatcaaaaca aaaggcaaga gagctggttt cgacacaaga aaatgcgcca attttgagcc
    34501 agaccccagt tacgcgtttt gcgccgtgtt ttgcggcctg ctgttcgatc aattccagtg
    34561 cccgttggca gagggttatt tcgtgcatat cgcctcccat taactattgc cagctacaag
    34621 caataattgt gccagtgttg attatccctg cggtgaataa tgtcgatgat gtcgaaatga
    34681 cacgtcgaca cggcgacgaa attcatcttt agcttaaaaa tcgttttaat aacaataaat
    34741 taaaaattgg cacagaaaat gcttaaagct ggcatctctg ttaaacgggt aacctgacaa
    34801 tgactatttg ggaaataagc gagaaagccg attacatcgc acagcggcat cgtcgcctac
    34861 aggaccagtg gcacatctac tgcaattcgc tggttcaggg gatcacgtta tcgaaagcgc
    34921 gcctgcatca cgccatgagc tgcgcgccgg acaaagaact ctgtttcgtc ctttttgaac
    34981 attttcgtat ttacgtcacc ctggcggatg gctttaacag ccacaccatc gagtattacg
    35041 tcgaaacaaa agagggcgaa gacaaacagc ggattgcgca ggcgcaactg agcattgacg
    35101 gcatgattga tggcaaggtc aacatccgcg atcgcgaaca ggttctggaa cactatctcg
    35161 aaaaaatcgc tggcgtttac gacagcttat acaccgccat tgaaaacaat gtgccggtga
    35221 atttaagcca actggtaaag ggacaaagcc cggcagcatg agctgaggct ttgcccgttt
    35281 tgcaggcgtt acgcctgttt ggggatgggc gtgtcgatga gtgtcgaaaa tgacatttca
    35341 tcggcatgtt ttcgtcaaaa atgacaatca cctgaggaat gcctggtgaa tcgttttgta
    35401 attgctgact ccacgctctg tatcggctgc cacacttgtg aggcagcctg ttcagagacg
    35461 catcgccagc acggcctgca atcaatgccg cgcctgagag tgatgctgaa tgaaaaagaa
    35521 tctgcgccgc agctctgtca ccactgtgaa gatgcaccct gcgcggtggt ctgcccggtt
    35581 aacgtcatca cccgcgttga tggggccgtg cagttgaatg aaagcctgtg cgtaagctgc
    35641 aagctgtgcg gcatcgcctg cccgtttggc gcaattgaat tttccggcag ccgtccgctg
    35701 gatattcctg caaatgccaa taccccgaaa gcgccaccgg caccgcctgc tccggcgcgt
    35761 atcagtacgc tgcttgactg ggtgccgggt attcgcgcga tcgccgtcaa atgtgacctt
    35821 tgtagctttg atgaacaagg tccggcctgc gtgcggatgt gcccgaccaa agccctgcat
    35881 ctggtggata acaccgatat cgcccgcgtc agcaaacgta agcgtgagct gacttttaat
    35941 acggactttg gcgatctcac cttgtttcag caggctcaaa gtggagaggc taaatgagcg
    36001 caatttccct gatcaatagc ggcgtggtgt ggtttgtcgc cgccgctgtt ctggcatttc
    36061 tcttttcttt tcaaaagacg ctaagtggct ggatagccgg aattggcggc gcggttggta
    36121 gcctgtatac ggcagccgcg ggcttcactg tgctgactgg cgcggttggc gtgagcggtg
    36181 cgctgtcgct ggtaagctac gatgtgcaaa tctccccgct taacgcgatt tggctgatta
    36241 cgctcggtct gtgcggtctg tttgtcagcc tctacaacat tgactggcat cgccacgcgc
    36301 aggtgaagtg caacggcttg cagatcaata tgttgatggc tgctgccgtc tgcgccgtca
    36361 tcgccagcaa cctcggcatg ttcgtggtaa tggccgaagt catggccttg tgtgcggtgt
    36421 tcctcaccag caacagcaaa gagggcaaac tgtggtttgc gctggggcgt cttggcactc
    36481 tgctgctggc gattgcttgc tggctgctgt ggcagcgtta tggcacgctg gatctgcgcc
    36541 tgctggatat gcgtatgcaa cagctgccgc tcggttccga tatctggctg ctcggtgtga
    36601 ttggctttgg cctgctcgcc gggattattc cgctgcacgg ctgggtgccg caggcacatg
    36661 ctaacgcctc tgcgccagct gccgcgttgt tttctacggt agtcatgaaa attggcctgc
    36721 tgggcatttt aatcctgtca ctgctgggcg gtaatgcacc gctgtggtgg gggatcgtgc
    36781 tgctggtgct cggcatgatc accgcgtttg tcggtggtct gtatgcgctg atggagcaca
    36841 acatccagcg cctgctggct taccacaccc tggaaaatat cggcattatc ctgctggggc
    36901 tgggcgctgg cgtaacgggt atcgcgctcg aacaaccggc gctgattgct cttggcctgg
    36961 tcggtggtct gtaccatctg cttaaccata gcctgttcaa aagcgtactg ttcctcgggg
    37021 cggggagcgt ctggttccgt accggtcatc gcgatatcga aaaactcggt ggtattggca
    37081 agaaaatgcc ggttatctcc atcgccatgt tagtcgggtt gatggcaatg gctgcgctgc
    37141 cgccgctgaa cgggtttgcc ggggaatggg ttatctatca atcctttttc aaactgagca
    37201 atagtggcgc gtttgttgcc cgtctgctgg ggccgctgct cgctgtgggt ctggcaatta
    37261 ccggtgcgct ggcggtgatg tgtatggcga aagtctatgg cgtcacgttc ctcggcgcgc
    37321 cgcgtaccaa agaagccgaa aacgccacct gtgcgccgct cctgatgagc gtaagcgtag
    37381 tggcactggc gatttgctgc gtaattggcg gtgttgctgc gccgtggctg ctgccgatgc
    37441 tctctgctgc cgtacctctg cctctggagc ctgctaacac caccgtttct caaccaatga
    37501 tcacattgct gctgattgcc tgcccgctgc tgccattcat cattatggcg atttgcaaag
    37561 gcgaccgcct gccgtcacgt tcccgcggtg cggcctgggt gtgcggctac gaccatgaaa
    37621 aatcaatggt gattaccgct cacggttttg ccatgccggt taaacaggcg tttgcgccag
    37681 tgctgaaact gcgcaaatgg ctgaatccgg tgtcgctggt gccgggctgg cagtgcgaag
    37741 gtagtgcgtt gctgttccgc cggatggcgc tggttgaact ggcggtactg gtggtgatta
    37801 ttgtttcacg aggagcctga gaatgagtgt tttatatccg ttaattcagg cgctggtgtt
    37861 atttgccgtt gcgccgctgc tctccggtat tacccgcgtg gcgcgcgccc gtctgcataa
    37921 ccgtcgcggg ccgggcgtgt tgcaggagta tcgcgacatt atcaaactgc tgggccgcca
    37981 gagcgttggc ccggatgcct ctggctgggt gttccgcctg acgccgtatg tgatggtggg
    38041 cgtcatgctg actatcgcta ctgcgctgcc ggtggtgacc gtcggttctc cgctgccgca
    38101 actgggcgat ttgatcacct tactgtatct cttcgccatc gcgcgtttct tctttgccat
    38161 ttccggtctg gataccggta gcccgtttac cgctatcggt gcgagccgtg aagcgatgct
    38221 tggcgtgctg gtcgaaccga tgttgctgct tggtctgtgg gttgccgcac aggttgccgg
    38281 ttccaccaac atcagcaaca ttaccgacac cgtttatcac tggccgctga gccaaagcat
    38341 cccgctggtg ctggcgctct gcgcctgtgc gttcgccact tttatcgaaa tgggcaaact
    38401 gccgttcgac ctggcggaag ccgagcagga gttgcaggaa ggtccgctct ctgagtatag
    38461 cggcagcggc tttggcgtca tgaaatgggg tatcagcctg aaacagctgg tggtgttgca
    38521 gatgttcgtc ggggtgttta ttccgtgggg acaaatggaa accttcaccg ccggtggact
    38581 gctgctggcg ctggtgattg cgatcgtaaa actggtggtc ggcgtcctgg ttatcgcgct
    38641 gttcgaaaac agcatggccc gtctgcgtct tgatattact tcgcgcatta cctgggctgg
    38701 gtttggcttt gcatttttag cgttcgtctc cttgctggcg gcgtgattaa agagagtttg
    38761 agcatgtctg aagaaaaatt aggtcaacat tatctcgccg cgctgaatga ggcatttccg
    38821 ggcgtcgtgc tggaccacgc ctggcagacc aaagagcagc tgactgtcac cgtaaaggtg
    38881 aactatctgc cggaagtggt ggagtttctc tactacaagc aggggggctg gctgtcggtg
    38941 ctttttggta acgacgaacg caaactgaat ggtcattacg ccgtttatta cgtgctgtcg
    39001 atggagaagg ggactaagtg ctgggtaacg gttcgcgtcg aagttgatgc caacaaaccg
    39061 gagtatccgt ccgtgacgcc gcgcgttccg gcggcggtgt ggggcgagcg cgaagtgcgc
    39121 gatatgtacg gtttgattcc ggttggtctg ccggatgaac gccgtctggt gctgccggat
    39181 gactggccgg atgaacttta tccgctgcgt aaagacagca tggattatcg tcagcgtccg
    39241 gcaccgacca ccgatgctga aacctacgag ttcatcaacg aactgggcga caagaaaaac
    39301 aacgtcgtgc cgattggtcc gctgcacgtc acttctgacg aaccgggcca cttccgtctg
    39361 ttcgtcgatg gcgaaaacat tatcgacgca gactaccgct tgttctatgt ccatcgcggt
    39421 atggaaaaac tggcggaaac ccgcatgggt tataacgaag tgaccttcct ctctgaccgt
    39481 gtgtgcggga tctgcggctt cgcccacagc accgcctaca ccacgtcggt ggaaaacgcg
    39541 atgggtattc aggtgccaga acgtgcgcag atgatccgcg ccattctgct ggaggtggaa
    39601 cgcctgcact cgcatctgct caacctcggc ctcgcctgcc actttaccgg cttcgactcc
    39661 ggctttatgc aattcttccg cgtgcgtgaa acctccatga aaatggccga gatcctcacc
    39721 ggtgcgcgta aaacctacgg cctgaacctg atcggcggga ttcgtcgcga tctgttgaaa
    39781 gatgacatga tccagacccg ccagctggcg caacagatgc gtcgtgaagt gcaggagctg
    39841 gtggatgtgc tgctgagcac accgaacatg gaacagcgca ccgtcggcat tggtcgtctg
    39901 gacccggaaa ttgcccgcga tttcagtaac gttggcccga tggtccgcgc cagcggacac
    39961 gctcgcgata cccgcgctga tcacccgttt gttggttatg gcctgctgcc aatggaagtc
    40021 cacagcgagc agggctgcga cgttatttcg cgtctgaaag tgcgtatcaa cgaagtctat
    40081 accgcgctga acatgatcga ctacggtctg gataacctgc cgggtggccc gctgatggtg
    40141 gaaggcttta cctacattcc gcaccgtttc gcgctgggct ttgccgaagc gccgcgcggt
    40201 gatgatatcc actggagcat gactggcgac aaccagaagc tgtaccgctg gcgctgccgt
    40261 gccgcgacct acgcgaactg gccgaccctg cgctacatgc tgcgtggcaa cactgtttcc
    40321 gatgcgccgc tgattatcgg tagcctggac ccttgctact cctgtaccga ccgcatgact
    40381 gtggtcgatg tacgtaagaa gaagagcaaa gtggtgccgt acaaagaact cgagcgctac
    40441 agcattgagc gtaaaaactc gccgctgaaa taaggaatcg ccatgtttac ctttatcaaa
    40501 aaagttatca aaaccggtac ggcgacctcg tcttatccgc tggagccgat tgcggttgat
    40561 aaaaacttcc gtggtaagcc agagcagaac ccgcagcagt gcatcggctg cgcggcctgc
    40621 gtcaatgcct gcccgtcaaa cgccttaacg gttgaaactg acctcgccac aggagagctg
    40681 gcctgggagt ttaatctcgg gcgctgcatc ttctgtggac gctgcgaaga agtttgcccg
    40741 acggcggcga ttaagctgtc gcaagagtac gaactggcgg tgtggaagaa agaagacttc
    40801 ctgcaacagt ctcgcttcgc gctgtgcaac tgtcgcgtct gcaatcgtcc tttcgccgtc
    40861 cagaaagaga tcgactacgc cattgcgctg cttaagcaca acggcgacag ccgcgcggaa
    40921 aaccaccgcg aaagctttga gacttgcccg gaatgtaagc gccagaaatg cctggtgccg
    40981 tccgaccgta ttgaactgac tcgccatatg aaagaggcca tctgatgagc aatttattag
    41041 gcccccgtga cgccaacggc attccggtcc cgatgacggt ggatgaatcc atcgccagca
    41101 tgaaggcgtc gttactgaaa aaaatcaaac gttctgccta tgtttaccgc gtggactgcg
    41161 gcggctgcaa cggctgcgaa atcgaaattt tcgccacttt atcgccgctg tttgatgcag
    41221 aacgcttcgg cattaaagtc gttccttcac cgcgtcatgc ggatatttta ctgtttaccg
    41281 gcgcggtcac ccgtgcaatg cgatcccctg cgctgcgtgc gtggcagtcc gcgccggacc
    41341 cgaaaatttg tatctcctac ggtgcctgcg gtaacagcgg cgggatcttc cacgatctct
    41401 actgcgtgtg gggcggtacg gataaaattg tccctgtgga tgtttatatc cctggctgcc
    41461 cgccaacgcc tgccgccacg ctgtacggct ttgcaatggc gctcggcctg ctggagcaga
    41521 aaattcacgc ccgtgggccg ggtgaactgg atgaacaacc ggcggagatc ctgcatggcg
    41581 atatggtgca gccgctgcgc gtgaaagtgg atcgcgaagc acgccgcctg gcgggttatc
    41641 gttacggtcg tcagattgcc gatgacttcc tgacacagtt agggcagggc gaagaacagg
    41701 ttgcacgctg gctggaagcg gaaaacgatc cgcgtctgaa cgagattgtc agccatctga
    41761 atcatgttgt agaagaggtg cgtatccgat gagtgaaaag gtggtgttca gtcaactgag
    41821 ccgtaaattt attgatgaga acgatgccac gcccgccgag gcgcagcagg tggtctatta
    41881 cagcctggcg attggtcacc accttggggt tatcgattgc ctggaagcgg cgctcacctg
    41941 cccgtgggat gaatatctgg catggattgc cactctggag gcgggcagtg aagcccgccg
    42001 caaaatggaa ggcgtaccga agtacggtga gatcgtcatc gacattaacc atgtgccgat
    42061 gctggccaac gcattcgata aagcccgggc agcgcaaact tcgcagcagc aggaatggag
    42121 tacaatgctg ttaagtatgc tgcatgatat tcatcaggaa aacgccatct atttgatggt
    42181 gaggagattg cgtgactgac gttttactct gtgttggcaa tagcatgatg ggcgatgatg
    42241 gcgcaggtcc gctgctggcg gaaaagtgcg ccgccgcgcc gaaaggtaac tgggtggtga
    42301 ttgacggcgg tagtgcaccg gaaaacgaca tcgtcgccat ccgtgaactg cgccctacgc
    42361 ggttactgat tgtcgacgcc acggatatgg ggctaaaccc cggcgagatc cgcatcatcg
    42421 acccggatga tatcgccgag atgtttatga tgactaccca taacatgcct ctgaactatc
    42481 ttatcgacca gttgaaagaa gatattggcg aagtgatttt cctcggcata cagccggata
    42541 tcgtcggctt ttactacccg atgacccagc cgattaaaga tgcggtagaa accgtttatc
    42601 aacgactgga aggctgggaa gggaatggcg gcttcgcgca gttagcggtg gaagaagagt
    42661 agtttttcat taaggaatca ggacagggat gttcttgatg gggtgaacca gctctgatgc
    42721 caaatgctaa attgcccgat gcgctgcgct tatcgggcct tcctggttcg tgcgacatgt
    42781 aggccggata aggcgttcac gccgcatccg gcactgttac ttactctaaa tcttccccat
    42841 tactggcaat cactttttta taccaccaga acgatttctt acgtgtgcgc gtcagcgtgc
    42901 cgttgcctgc gtcgtcacgg tctacgtaga caaaaccgta gcgtttgctc atttcacccg
    42961 tagaggcgga aactaaatca atacagcccc atgtggtgta gcccatcagc ggaatgccat
    43021 ctgcaatcgc ttcgcccatt gcgcggatat gttcgcgtaa atagctgatg cgatagtcat
    43081 cgttaatctc gccattggca gcaagttcat cttttgcgcc gaggccgttt tccaccagaa
    43141 acagcggctt ctgataacga tcgtacatca tattcatggt gatacgcaga ccgagtggat
    43201 caattcccca gccccagtcg ctcacttgca gatacgggtt acgcagcgat ttcaccacgt
    43261 tcgccgcact gctgttgttg gcgttcatct ccgccgaggc gcagcgcgag gcgtaatagc
    43321 tgaaagagac aaaatcgacg gtgtttttca ggatctcatc atcgcccagc gctttatcta
    43381 tggttacccc tttttcgcga aatacgcggg cagagtaagc cggatacgcg ccgcgcgcct
    43441 gcacatcgat aaaaaacagg ttttcccgat ctttctccag cgccgcccag acatcttccg
    43501 gtttgcagct gtaagggtag aagttgccgc ccgccagcat acagcccacc tgattttgcg
    43561 ggttaacctc atgggcgatt ttggcggcta gcgcactggc aaccagctgg tgatgcgcgg
    43621 cctgatattt cacctgatcc tgattttcac cttcttcaaa caccagaccc gcgccggaga
    43681 acgggctatg caacataatg ttgatttcat tgaaggttag ccagtatttc accagaccat
    43741 caaatgcttc aaagcaggtt ctggcgtagc ggctgaaaaa ctccaccagc ttgcggttac
    43801 gccaggagcc atattcggtg accagatgca tcggcacatc gaagtggcac aacgtgacca
    43861 gcggttcgat accgtacttt ttacactctt caaagacaga acgataaaaa gcaatgccct
    43921 gctgattggg cgtgatttca tcgccctgcg gaaagagacg gctccaggca attgaggtac
    43981 ggaaaacctt gaatcccatc tctgccatca gggcgatatc ttctttataa cgatgataaa
    44041 aatccgtcgc ctcatggctg ggataaaact cgtcatcgcg caactgaaaa cgtttttcca
    44101 gccccagttt caccgccatt cgatgctcgc cgtgtgggat catatcgacg gtggtcagcc
    44161 cttttccgcc ttcacggaac gcaccttcag actggttggc ggcaagcgcg ccgccccata
    44221 aaaaaccttc tggaaatact gacattttca tcctcaatta agacttactt ctttggcgac
    44281 ggtcggttgt acgctctgat gctttcgcgc ctgggcagcc gcttcctcaa caggaatatc
    44341 ctcaaagccg agcaacagtg tgaggataaa cgacagcacc accgccagcg ccatgaccgc
    44401 gaacacccag acgatgctca ttggattcgc cggatcgaag aattgcacgc tggtaaatag
    44461 ccccggcgct gccattgagt ggctggcaag ccccgccata ccggcaaccg cgccgcaaat
    44521 aaaaccgctg ataagactgg cgataagcgg acgtttcagg cggatcgcca cgccgtataa
    44581 cgccggttcg gaaatccccg ccataatggc tgatgccgcc gcagccagcg ccgtctggcg
    44641 cagttccggg tttttcgttt tccacgccac cgccagtgat gaaccgccca gcgacaggtt
    44701 agcgccgatc tctgacggca tgaccatccc ttctttgccg gtttcggcaa tggtctgaat
    44761 gatggttggc gtaaagacgc ggtgcatccc ggtcattacc agcagaggcc acagcgcgcc
    44821 cataatggcg actgaaagcc agcccagata accatgaatg ctgtaaacca gcgccgaaat
    44881 ggcgctaccg atccagatac caatcgggcc aatcagcagg attgccagcg gtgcggcaat
    44941 caacacaatc agcattggct tgaggaagtt tttggtcacc gccggtgtaa tgcgatccac
    45001 ccagcgttcg atatatgaca ggcaccaggt catcaccagc gccgggatca ctgtgtaggt
    45061 gtatttcacc gcggtgaccg gaatcagggc aaattcgaca tgttcaccct gggccgcttt
    45121 cgccatcagt tcaataaaac tcggatgtac cagcacaccc gcgatggcaa tcgccagcga
    45181 catattggtt ttaaatttga tggcggcaga tgccgcgacc atcagcggca ggaagaagaa
    45241 agcaccgtca ccaatcacat tcagaatggt taaggtcggc gatccttttg tcagcacgcc
    45301 gctcatctcg aggatcatcg ccagcagttt gaccatcgat ccgccgataa tcgccgggat
    45361 cagcggtgac atggtgccga tcagcgcatc gaggatcccc gcaccaatgc gacgcggcgt
    45421 gagtttgggt ttacccacgg gctgtgcggg ctgcatatct cccggcagca ggctgacgac
    45481 ttcctgaaag gcttgtgaaa cggtattgcc gataatcacc tgacactggt tgtcactacg
    45541 taccacgccg agcacgccgg ggatggtttt taacgtcggg ctgtcgataa gctggtcatc
    45601 tttgataaca aagcgcaaac gcgtcataca gtgcgtgacc gccgagatgt tatcaacgcc
    45661 gcccagtgcc gctatctccg agcgtgccag cgccgcataa tttttggcca tcggatttta
    45721 tcctgttatc agtagggtag atgtagttgt tatcagtcga cgtaacggaa aaatgccgat
    45781 gctgaaacgg aattaggaaa ccggtttcac aaaatcatga atagttgtca ctaaataagc
    45841 aagagagtta attattcatt ttttatattt gtgaaaccgg tcacctgaat atttttcccg
    45901 ccgattgcgc aaggacaatc ggcaaacggt gcagtacact gcgttgattg cgtgtaaagg
    45961 gatgaaaatg atgacgacga tgctggaagt ggcgaagcgc gccggggttt caaaagcgac
    46021 cgtttcccgc gtgctttcag gtaatggcta cgtcagccag gagactaaag atcgcgtgtt
    46081 tcaggcggta gaagagagcg gttaccgccc aaacttgctg gcgcgcaatc tgtcggcgaa
    46141 gagtactcag acgctggggc tggtagtgac caacacgctt taccacggca tttattttag
    46201 tgaattactc tttcatgccg cgcgaatggc ggaagagaaa gggcggcagt tgctattggc
    46261 agatggtaaa cacagcgccg aagaagagcg ccaggcgatt cagtatctgc tggatttgcg
    46321 ctgcgacgcc attatgattt acccgcgttt tttaagcgtg gatgagatcg atgacatcat
    46381 tgacgcgcac agtcagccga taatggtgct taatcgccgc ctgcgcaaaa acagcagcca
    46441 tagcgtctgg tgcgatcata aacagaccag ctttaatgcc gtggcagagt tgataaacgc
    46501 cggacatcag gagattgctt tccttaccgg ctcgatggat tcccccacca gcattgaacg
    46561 tcttgctggg tataaagacg cgctggcgca gcatggtatt gcgctcaatg aaaaacttat
    46621 cgctaacggt aaatggacgc ccgccagcgg ggccgaaggg gtagaaacgt tgctcgaacg
    46681 tggggctaaa tttagcgcgt tagttgccag taacgacgat atggcgatag gtgcgatgaa
    46741 agcgttgcac gagcgcggcg tagcggtgcc agagcaggtg tcagttatcg gattcgatga
    46801 tatcgcaatt gccccctata tcgttccggc gctctccagc gtaaaaattc cggtgactga
    46861 gatgattcag gaaattattg gacggctgat ttttatgctc gatggcgggg atttctcacc
    46921 gccgaaaacc ttcagcggaa aactgatcca ccgcgactca ctcattgctc tttcgcgata
    46981 aacattgtca tcacatgtca tcgtcactag tgtcgatgac atcttttttc ctgcattaca
    47041 gaaattaatt tccttaaata acagtgaatt aaaaactggc atgatttgtg aatgtatcgg
    47101 cgcattaact gtcattgctg gagaatttga tgaaccgttt catcattgct gacgcgagta
    47161 aatgtattgg ttgccgtacc tgtgaagtgg cgtgcgtggt ttctcatcag gaaaatcagg
    47221 actgtgcatc gctgaccccg gaaacatttt taccgcgtat ccatgtcatt aaaggtgtga
    47281 acatttccac ggcgacagtt tgccgtcagt gtgaagatgc accgtgcgct aacgtctgcc
    47341 cgaatggtgc tatcagccgt gataaagggt ttgttcatgt gatgcaggaa cgttgcattg
    47401 gttgcaaaac ctgcgttgtg gcttgcccgt atggcgcgat ggaagtggtg gtacgtccgg
    47461 tgattcgcaa cagcggcgcg gggctgaatg tacgggctga caaagccgaa gccaataaat
    47521 gtgacctgtg caaccatcgt gaagacggcc cggcgtgtat ggcggcttgc ccgactcatg
    47581 cgctgatttg tgtcgatcgt aataaacttg aacaactgag tgcagaaaaa cgccgccgta
    47641 cggcgctgat gttctaaaaa tcttacagaa ctgttctggc atcaaaggaa ttcccggaaa
    47701 tattcgtaga atacggagcg ggcggtatcg ccgacctgtg actgccggat gcgacgctgt
    47761 cgtgtccggc tgggcgggtt acgcaattca tgatggcggg aataactcaa tggcaaaaaa
    47821 cacatcttgc ggtgtccaac tgcgtattcg tggcaaagtg cagggcgtcg gttttcgtcc
    47881 gtttgtctgg cagctggcac agcaattaaa tcttcacggc gatgtctgta atgacggcga
    47941 tggcgtagaa gtccggctgc gggaagaccc ggaaacgttt cttgttcaat tgcatcagca
    48001 ctgcccgccg ctggcgcgta ttgatagcgt cgagcgtgag ccgtacatct ggtcacaact
    48061 gcccactgag ttcaccatcc gccagagcgc gggaggtgcc atgaatacgc aaattgtccc
    48121 ggatgccgct acttgccctg cttgccttgc cgaaatgaat accccaggcg aacggcgtta
    48181 tcgttatccg tttatcaact gtacccactg cggcccgcgt ttcaccatta ttcgcgccat
    48241 gccttacgac cgcccgttta ccgtgatggc ggcgtttccg ttgtgtccgg cttgtgacaa
    48301 agagtaccgc gacccgctcg atcgtcgctt ccacgcccag ccggtggcct gcccggagtg
    48361 tggcccgcat cttgaatggg taagtcatgg tgaacatgca gaacaagagg cggcattaca
    48421 ggcggctatc gcacagttaa aaatgggcaa cattgtcgcc atcaaaggga ttggcggatt
    48481 tcatcttgcc tgcgatgcac gtaacagtaa cgcggtggcg acacttcggg cgcgcaaaca
    48541 tcgcccggcg aaaccgctgg cggtcatgtt gccagtggct gacggtttac cagacgctgc
    48601 gcgccagttg cttaccacgc ccgccgcgcc gattgtgctg gtggataaaa aatacgttcc
    48661 tgagctttgt gatgatatcg cccctgacct taacgaagtc ggggtaatgt tgcctgcgaa
    48721 cccgctccag catttgctgt tacaggaact gcaatgcccg ctggtgatga cctccggcaa
    48781 cctgagcggt aaaccaccag ctatcagcaa cgaacaggcg ctggcggatt tgcagggcat
    48841 tgccgacgga ttcttgatac ataaccgcga catcgtgcag cggatggatg attcggtggt
    48901 gcgcgaaagc ggcgaaatgc tgcgccgttc gcgggggtat gtgccggatg cgctggcttt
    48961 gcctccgggc tttaaaaatg ttccgcctgt gctgtgtctc ggagcggatc tgaaaaatac
    49021 cttctgcctg gtgcgcggtg aacaagcggt gttgagtcag catctgggcg atttaagtga
    49081 cgatggcatc cagatgcagt ggcgcgaagc gttacgcctg atgcaaaaca tctacgattt
    49141 taccccgaaa tacgttgtgc atgacgcgca tccgggctat gtctccagcc agtgggcgcg
    49201 tgaaatgaat ctgccgacgc aaacggtact gcatcatcat gcccatgcag cggcgtgtct
    49261 ggcagagcat cagtggccgc tggatggcgg tgatgtcatt gctttgacgc tcgacggtat
    49321 cggtatgggg gagaacggcg ctttgtgggg cggcgagtgc ctgcgggtga actatcgcga
    49381 atgtgagcac ctgggcggct tgcctgcagt ggcgcttccg ggtggcgatt tggcagcgaa
    49441 gcagccgtgg cgaaacctgc tggcgcagtg cctgcgcttt gtgccggagt ggcagaatta
    49501 ccctgaaaca gcaagtgtgc aacagcaaaa ctggagcgtg ctggcgcggg ccattgagcg
    49561 tggaattaac gcgccgctgg cgtcatcgtg tgggcggttg ttcgatgcag tggcggcggc
    49621 actgggctgt gcgccagcca cgttaagtta tgaaggtgaa gcggcttgtg ctctggaggc
    49681 gctcgcagcc tcatgccacg gagtgacgca tccggtgacg atgccgctgg tggacaatca
    49741 actggatctc gccgctttct ggcagcagtg gctgaactgg caggcacagg ttaatcaacg
    49801 cgcgtgggcg tttcatgatg cgctggcgca gggttttgcc gcgttgatgc gtgagcaggc
    49861 cacgatgcgt ggtatcacta cgctggtatt tagcggcggg gttattcata accgtttgct
    49921 gcgtgcacgt ctggcgcatt atctcgctga tttcacattg ctctttccac agagtttacc
    49981 ggcgggtgat ggcggtttgt ctctggggca gggggttatt gctgcggcgc gttggttagc
    50041 gggtgaagtc cagaacggat aaaacgtgtt gcatttggac accattgccg gatgcggcgt
    50101 aaacgcctta tccggcctac acatgcgtcc ccgtaggtcg gataagacgc gctagcgtcg
    50161 catccgacat tttaggcaca gtagcccacc tacatcggca atgttttcaa caatccaaat
    50221 gcctctttca tccgatcctc actgaccaca aaggcgcgaa gctggtcagc atcgtcaaca
    50281 ccgcgagcca ccattcccta gcgttcggta ttaatttgcc agcgtaaatc ctgacgctgg
    50341 gtttcgcctg ccagatgcag cggtaattcc ggcgttttga ttttcaccag catcgtcggt
    50401 agtttcagcg gcgtgttatt gccgagaaga ttttttgcca gcaccatcgc gctaagttga
    50461 atcggctgca ggaatggcag tacctgaccg ttgatttccg cgtaatcgcc cagcgcataa
    50521 atatcgtcat tactggtttg cagataacta tcgacgcaaa cgccgcgatt aatcgtcagc
    50581 ccggcgcgtc gtgccagggc tgtttccggg cgcagtccgg tggcggcaat taccgcatcc
    50641 acttcgatac tacgctggtg gtccagcgtt gccagaatgc cagaatccgt tttttccagc
    50701 ccctgtaact gagatttcaa cagcagatga acgcccatct ccgtcaaccg atgctgcaag
    50761 cggctgctta cttccggtgg cattaacgac gccagaatac tggcagcgtt gtcgattagc
    50821 gtgaccgctt tgcctgcacg acaaaaatcc atcgccagtt cgctaccaat caaaccaccg
    50881 ccaacaatca acacgcgtcg ggcatcccgc agttgcgttt cacaggcgcg atactcttgc
    50941 tgactattta acgtcagcat taactcacgc ccaggcacag gcgggacaaa ggcactggca
    51001 ccggttgcca gtactagctt gtcgtattgc cactgattat tctggctttt caccacacgg
    51061 gcttcggcat cgatatccgt cacccaggtt tgtggaaaca ggtgcagatt aaactgctcg
    51121 gcaaattcac ccgccgtctg gcgggtaagg tcatcggcac gttgcccctg actgataaca
    51181 tggctgaggt caggtttgtt gtactcatcc atgctgtcgg cggcaatcag ggttaatgga
    51241 atagtggcgt cctgtttgcg aatatttttc accagttggc gggcggcgaa gcccgaaccg
    51301 atgatcacaa tgccgttact cattttgcct ccgatgccag ttcttcaaag acgtctttgc
    51361 cgagggagca ttccgggcag aggaagttat ccgggacttc actccacggc gttcctggcg
    51421 caacgtcctg cattggctcg ccttttgccg gatcgtaaat ccactggcag accctgcact
    51481 gcatccgtgg gccgaggtca gccgtcgtgg tggcagaggt ttcttctttg actaccttat
    51541 tcaccgtgct ctgcggcagc ggcgcgagcg cccactgacg ggcgatttcg cgaccgtgtt
    51601 cacggcataa ctccagagcg tcctggtctg gtcgccattt cgctttcagg ctaagcgaca
    51661 tttcgaaacc cgcatcctgc aggcgcgtgg aaagacgatc caccgcaccg ccgctccagc
    51721 cgtgagagcc gaaagcactg gcgcgtttgt tacggaagcg taaaccagtc atctcctcca
    51781 ccagcccggc gattttcggc atcatcacgt tattcatcgt cgaagtgccg accagcacgc
    51841 cttttgagcg gaagacattg gtcaggattt cgtttttatc gcttcgggcg acgttgaaaa
    51901 ttttcaccgc cacgcgtggg tcggtttccg caatcccctg ggcgatagcg tcagccatca
    51961 tgcgggtgtt attcgacatg gtgtcgtaga aaatggtgat tctgtcttcc tgataatcag
    52021 ccgcccattt caggtacagc tcgacaattt gcgtcgggtt atcgcgccat accacgccgt
    52081 gagaggtcgc tatcatatcg actggtaagt taaagcccag gatctcggta attttcggtg
    52141 ttaccaggcg gctgaacggc gtcaggatat tggcgtagta acgctggcac tgctcgaaaa
    52201 gctccgtctg atccacttca tcgttgaaca gatgctcgtc gcagtagtgc tgaccgaaag
    52261 catcgttact gaacagcacc gcgtcgcctg tcaggtaagt catcatgctg tccggccagt
    52321 gcagcattgg cgtttcgaca aaaatgagct gtttgccgtt gccgatatcc agcgtgtcac
    52381 cagttttcac cacattaaaa ttccactccg gatgatggtg atgaccattt atcgagtcga
    52441 tagcgttggc agtacagtaa atcggcgtat cgggaatttg cgccatcagt tcggtcagcg
    52501 ccccagcgtg gtcctcttct gcatggttaa tcacgatgta atcgatatcc gccagatcga
    52561 tttcattacg caggttctgc acaaattcgc ggctgaattt atggtcgacg gtgtcgatca
    52621 gcacgttttt ttcttcgcgg atgaggtagc tgttgtaact gctgccgcgc agcgttttat
    52681 attccgtacc gtgaaaatca cgcacttccc agtcacgttg accaacccaa tgaatgttat
    52741 ttttcaccac aatagacata gcaacctcaa tttattcagc gtgttctaaa aagatgtctt
    52801 gctaattgca gattacgtgc cagtttttta tctgattgtt tttactctat aaataaaatt
    52861 atgctcatta atgagtagtc aaaatgacta tcaatcaaat ggtcgatatg acaatatcta
    52921 tagtcaaatt gacagtgagg caaagatgag tttttccgtt gatgtgctgg cgaatatcgc
    52981 catcgaattg cagcgtggga ttggtcatca ggatcgtttt cagcgcctga tcaccacgct
    53041 acgtcaggtg ctggagtgcg atgcgtctgc gttgctacgt tacgattcgc ggcagtttat
    53101 tccgcttgcc atcgacggtc tggcaaaggg tgtactcggt agacgctttg cgctggaagg
    53161 gcatccacgg ctggaagcga ttgcccgcgc cggggatgtg gtgcgctttc ccgcagacag
    53221 cgaattgccc gatccctatg acggtttgat tcctgggcag gagagtctga aggttcacgc
    53281 ctgcgttggt ctgccattgt ttgccgggca aaacctgatc ggcgcactga cgctcgacgg
    53341 gatgcagccc gatcagttcg atgttttcag cgacgaagag ctacggctga ttgctgcgct
    53401 ggcggcggga gcgttaagca atgcgttgct gattgaacaa ctggaaagcc agaatatgat
    53461 gccaggcgat gccacgccgt ttgaagcggt gaaacagacg cagatgattg gcttgtcccc
    53521 tggcatgacg caactgaaaa aagagattga gattgtggcg gcgtccgatc tcaacgtcct
    53581 gatcagcggt gagacgggaa ccggtaagga gctggtggcg aaagcgattc atgaagcctc
    53641 gccacgggcg gtgaatccgc tggtctatct caactgtgct gcactgccgg aaagtgtggc
    53701 ggaaagtgag ttgttcgggc atgtgaaagg agcgtttact ggcgctatca gtaaccgcag
    53761 cgggaagttt gaaatggcgg ataacggcac tctgtttctg gatgagatcg gcgagttgtc
    53821 gttggcattg caggccaagc tgctgagggt gttgcagtat ggcgatattc agcgcgttgg
    53881 cgatgaccgt agtttgcggg tcgatgtgcg cgtgctggcg gcgactaacc gcgacttacg
    53941 cgaagaggtg ctggcagggc gatttcgcgc tgacttgttt catcgcctga gcgtgtttcc
    54001 actttcggtg ccgccgctgc gtgagcgggg cgatgatgtc attctgctgg cggggtattt
    54061 ctgcgaacag tgtcgtttgc ggctggggct ctcccgcgtg gtattaagtg ccggagcgcg
    54121 aaatttactg caacactatc gttttccggg gaacgtgcgc gaactggaac atgctattca
    54181 tcgggcggta gtgctggcga gagccacccg caacggcgat gaagtgattc ttgaggcgca
    54241 acattttgct tttcctgagg tgacgttgcc gccgccagaa gcggcggcgg tgcccgttgt
    54301 taagcaaaac ctgcgtgaag cgacagaagc gttccagcgt gaaactattc gccaggcact
    54361 ggcacaaaat catcataact gggctgcctg cgcgcggatg ctggaaaccg acgtcgccaa
    54421 cctgcatcgg ctggcgaaac gtctgggaat gaaggattaa ataatcccgg cctgatagaa
    54481 atcctgcagg ttaattgcgc cggtgagttt gccgttttca tccaccaccg gtgcggcagt
    54541 gattttgcgc ttcatcagga tctctttggc gtcgatggcg cgactttgcg cctgtaacgt
    54601 ggtgccgcct gtcgtcatcg cttcattaac tggcgtggtg agtgcgccgc cgcctaccag
    54661 ccagcgacgt aaatcgccgt cggtaaagac gccttgtacc tgttgttgag cgtcacatac
    54721 cgccaccagc cccagaccgg tgcggctgag ttccagcatc gcatccatca cgctggcggt
    54781 taacgccacc tgtgggatgg catcgtcacg gcgcatcaga tgatgcactt tattcagcaa
    54841 gcgagcgccc agtgccccgg ctgggtggga gcgggcaaaa tcttcttcat taaatccgcg
    54901 cgcctgcatg accgccatcg ccagcgcgtc acccatcatc agggtattga cggtgctgga
    54961 ggtcggcgca aggtgcatcg ggcaggcttc gcgttctacg gagatatcca gcaccgcttt
    55021 tgccgccagg cccagcggtg acgtcggttt gccggtcatc gccagcagcg cgatagattt
    55081 atcttccaga cgcggaataa tcagatccag ttccttcgcg ccaccggagt aagagataaa
    55141 cagcatcaca tcgcggcttt caatcatccc cagatcgccg tgcagtgctt ctgccggatg
    55201 gacaaaaaaa gccggtgtgc cggtactggc aagtgttgcg gcgattttct taccaatgtg
    55261 gcccgatttg ccaattcccg aaaccaccac tttgccttcg cagtgcagga tgatattggc
    55321 ggcgcgaaca aaatcatcgc ccagacgttc cggtaaacgg cttgcttcct gcaactccag
    55381 cattaacgtc tgacgtcccg cgttcagtag tgcttcactc attgctctct ccggttatga
    55441 tcacatcgat ccctttctct tccagcgcct gacgaaacgc cggatcgata cctgcgtcgg
    55501 taatcagctt atcgacgctt tcaagactgc aaactacgtt ggggctttta cggccaaact
    55561 ttgatgagtc cgccatcaaa atcacttcgc gcgcggcatt gcacattgcc ttactgacgg
    55621 tataaacctc gttgaaggtg gttacgcccg cattgagatc gatgccgtcg gtgcccataa
    55681 acaatttatc gaaactgaaa tgttcgaagg cattctctgc cagctgtccg tgaaatgagg
    55741 ccgatttttt acgaaacgtt ccgcctggca tcaggatagt ttgttcgtta tccagttcgg
    55801 atagcgcatt gacgatatgc aggctgttgg tcatcaccgt gatgttatta aagcgcgaga
    55861 gcaggggaac catctgcaaa acggtactgc cagcatcaag aatgatcgaa tcgccatcat
    55921 ggataaaact aacggcagct tctgcaatca gctctttctt gtgggtgttg atgagtgttt
    55981 tatgatcgat aggcggatcg gattcctctt tattcaacac cactccgcca taagtacgaa
    56041 tgacggttcc ggcatgttcc agaatgacca gatctttgcg aatggttgtg cctgtggtgt
    56101 caaagtattg cgccaattct tcaaccgagc atttaccctg cttttgcaga tactccagaa
    56161 tggcggcctg acgctgacga ggtttcatgg gcgtgattac ctgatttagg tttcaaaatg
    56221 ataacttcgc aagcaagtaa cattcacaac gaaattatcc acgtttcagt ttaagcgcca
    56281 atgatagagc attctgtgat agtggatcat ggggaaagat cacatcgggc tgtaaatcac
    56341 ccgcatgcat accggtaatt gcgggaattt tttgcggtcg ggcgaagacg gtcagtcctt
    56401 tcataaacaa ggtgtcgacg atgcgctgct gatcgtccag ccgatggcga ccacgacccg
    56461 cggtttaaag cgcccgctgg aacgacccac gccaacccgc ccttgctggc atagtgtgtc
    56521 gaaggcacgg ttaaaacgag aaatttgcca gccgcctaag gccagttgcg cacaccaggc
    56581 gataacggcg acggtgatga gtgcggatac cataactttt ccttaatgta gtggcggaag
    56641 tcctgtatgc ctgatgagcg tagcgcatca ggcattctat agtctcacgg agatccttaa
    56701 tggatctccg ctgttgatca gaacatcacc tgaccgccgg tgacattgat cgactgtccg
    56761 gtgcagtacg acgccttagg actggcgtag aacagcagca tattcagcac atcttgataa
    56821 tcgcagccgc gtttgagcgg tactttgtca atgtaatact gctcgacttg atccggtttg
    56881 atacccagct tggtcgcgta ttgtggcaac agtgactgga acatcggcga tttcagcagg
    56941 ttaccgagca tcagtgaatg caccgtaatg ccgtactccg ccagatccag cgccagtgat
    57001 tgagtcagcc cgacgccacc aaatttcgct gcgctgtagc cagagttgtg tttgctgccc
    57061 actttgccgg atttcgagtt gatctgaata atgcgaccct gaatcccgtc gcggatcatc
    57121 aaacgcgaaa attcacgggc acacaggaaa taacccacca gattcacttg tagcgaacgg
    57181 tcaaaatcgc cgagctggaa gtcgctgata aaggctgctt ttgctattcc ggcgctatag
    57241 accagcaaat ccacgcgacc aaagatttca tctaccccac gagagagcgc cagaacgctt
    57301 tgctcgctag tggcgtcagc accaaaaccg tacgccatac tttcaccata ttcggcgtta
    57361 atttcttgtg ccacatttgc ggctttgtcg ctctgaatat cgacaaccgc gacgcgatac
    57421 ccctcggcaa ccagaccgtg gcacaggaac gcgcctaagg tttgcccacc accgatgaca
    57481 acggcaacct gattcatttt ttactcctta acagattcaa acttcaaaac cgatcccggc
    57541 gcgatatcgt cgggtacagg gcctgccaca tggacagtgc ccggaaattc cgcttcgttt
    57601 aaaccatcga agcgcagggt gacatgaccc agttcgcgaa ggttgtcttc cgccacgctg
    57661 ccaacagcgg tcaccggata gcgatgctgc ccgagcgtaa attgcaaacc gggatggagt
    57721 gcacctttca actcgccgtg gcaatgaatg aagcaatact cttcgaggtc cgctggcgcg
    57781 ccttcacgaa aggtgatgag catctggtcg ctgagggcgt cagtggcact cgcgccgata
    57841 cgggtgatgg tggtcttata aataacggtc atgtttcagc ctctattgat agataaaacc
    57901 ggagacaaac caggcgatca gtacagtcgg tgcgccggtt aaaaagcggc tcaccagtac
    57961 agaagggaca ccgacgcgaa ccgtgtcctg acgggcttcc gccagcgaca aaccgaccgg
    58021 gatgaagtcg caggccgcct gcgcgttgat ggcaaacagt gccggtaaag ccagatgcgg
    58081 cggaatattg ccgagaccaa tctgcacgcc aatcaatacg ccgataacct gtgcgataac
    58141 tgcgcctggg ccgaggaaag gtgaaagcag tgggaaggag cagatgagcg ccagcatgac
    58201 cagacccagt ggatggctcg ccagcggagc aagaccgtgg gcaatccagt caccaaggcc
    58261 agaagccata atgatgccaa tgagcgccga gacgaatgcc ataaacggca gaatggtttt
    58321 taatacagtg tcgatggtgt cacgaccaga ttgaaacagc accgcaacgg cggaccccat
    58381 gcccattccc accttcgcca gtaaaccatc gctttgttcg gtgattttct tactggtgtc
    58441 atagtcacgg cccacggaag agggttgtgg tgtcgcatca cccactacag tgatgttttc
    58501 ttcttttacg ccagagacat aaatatcttc cacaatgtac tgcgccagcg gaccggactt
    58561 gcccgtcgag tggatattaa tggtgggaat acgtcgtttc ggatagatgc cgcagcgtaa
    58621 tgtgccgcca cagtcgatta ccgcgacacc aatttccgcc tccgcgggtt caccttcttt
    58681 aaatccgtca atagcctgcc agccagtaag ttgtgccagt ttgtcaacaa tcgcaggccg
    58741 ggtaccggcg gtgatataga cgattttttt gcccggcgtg gcttccagct caagcgggcc
    58801 gccccagcca cccgttcctt tttcgatccg aatacgcgtc atgatgttgc tcctgccagg
    58861 tgaacttttt gttcaagttg aatgcccatc tttttctcaa aaatggcggt ggtcagatcg
    58921 gtcacccagc cgcgaaagaa gttggtgacc agaccaacca gcagatagct caacgccagt
    58981 gggccaagtg gcaggttcag cgttgtcaga ccgctggcaa tgccaagata aacaaacagt
    59041 tcgccagggt tgatatgggg aaagaggcca ttcattgagt ggcagctata agaggccgcc
    59101 gcgtagtagc tgggtttgta cttttccggc ataaagcgac cctggcttaa ggtcatcgga
    59161 ttgcaaaaga caaacgtgcc aatgcacggt agcagcaggt aacgggaaac agggttaccg
    59221 gcgcaacgtt gagcaaaacg ttcaatacga tgctgaccga taaaattaat cagtgcgttc
    59281 atgataacca gcaggctaat caacagcgga agaatgccgg tcaccatccc ggtaaacacc
    59341 tctccgccct tttggaacag cccgataaac cactctgcac catgagtaat ggtttctatc
    59401 attgttctct ccttcaggat ttattgtttt attaccaaac ggcaacctaa tctaatcaga
    59461 ttgaaagatt taaaagtgtt attttaatct aaaaatgaaa gataaatatt ttaatttgga
    59521 agtttgagta aaaggatagc gaggggaatg agttgagtta tgtaaagtcc gtatcgggca
    59581 gtgactaccg cttccttgtg cggggcgtga tgctttacca tacttgcccc tggttgaatc
    59641 tgttaaatgg acccctcatg ttcaagcgtc gttatgtaac attgcttccc ctttttgtgt
    59701 tgcttgccgc ctgtagcagc aagccaaaac ctactgagac tgaaacgacc accggaacgc
    59761 cgtctggcgg cttcctgctt gagccgcagc acaatgtgat gcagatgggc ggcgatttcg
    59821 ctaataaccc gaatgcccag cagttcatcg acaaaatggt gaacaaacac ggtttcgatc
    59881 gtcagcagtt gcaggaaatt ctctcccagg cgaagcgtct ggattcggta ctgcggctga
    59941 tggataacca ggcaccaacc acatcggtga aaccgccatc aggtccgaac ggcgcatggc
    60001 tgcgttatcg caaaaaattt attacgccgg acaacgtgca gaacggtgtg gttttctgga
    60061 atcagtatga agatgcgttg aatcgcgcgt ggcaggtgta tggcgtaccg ccggaaatta
    60121 tcgtcgggat tatcggcgtt gaaacccgct gggggcgcgt gatggggaaa actcgcatcc
    60181 tcgatgcgct ggcaacgctg tcatttaact acccacgccg cgcggagtat ttctctggcg
    60241 agctggaaac cttcctgctg atggcgcgcg acgagcagga cgatccgctc aatctgaaag
    60301 gttcctttgc cggggcgatg ggctacggac agtttatgcc gtcgtcttac aaacaatatg
    60361 cggtagattt cagcggcgac gggcatatca acctgtggga tccggttgat gcgatcggta
    60421 gcgtggcgaa ctatttcaaa gcgcacggct gggtgaaagg cgatcaggtc gcggtaatgg
    60481 caaacggtca ggctccaggc ttgccaaatg gcttcaaaac caggtacagc atttcgcagc
    60541 ttgccacggc aggtttaacg ccacagcagc cgctgggcaa ccatcaacaa gccagcctgc
    60601 tgcgtctgga tgtcggtacc ggttaccagt actggtacgg tctgccgaac ttctacacca
    60661 ttacccgtta taaccacagc acccattacg caatggcggt ctggcagtta ggacaagccg
    60721 tggcgctggc gcgcgtgcag taactatttg caagaggggg gcgtgagctt ccctctggct
    60781 aatcagcttt tttctgaatc ctcctcgtaa aattgcaacg ccaacaccat cttcctgacg
    60841 aaagtgctat cttgtccggc ataaattttt gactgacaga ggttgtgatg actgacagtg
    60901 aactgatgca gttaagtgaa caggttgggc aggcgctgaa agcccgtggc gcaaccgtaa
    60961 caactgccga gtcttgtacc ggtggttggg tagcgaaagt gattaccgat attgccggta
    61021 gctccgcctg gtttgaacgc ggatttgtca cctacagtaa cgaagccaaa gcgcagatga
    61081 tcggcgtacg cgaagagacg ctggcgcagc atggcgcggt gagtgaaccc gtcgtggtgg
    61141 aaatggtgat aggcgcactg aaagcggctc gtgctgatta tgccgtgtct attagtggta
    61201 tcgccgggcc ggatggcggc agtgaagaga agcctgtcgg caccgtctgg tttgcttttg
    61261 ccactgcccg cggtgaaggc attacccggc gggaatgctt cagcggcgac cgtgatgcgg
    61321 tgcgtcgtca ggctactgcg tatgcattgc agaccttgtg gcaacaattt ctacaaaaca
    61381 cttgatactg tatgagcata cagtataatt gcttcaacag aacatattga ctatccggta
    61441 ttacccggca tgacaggagt aaaaatggct atcgacgaaa acaaacagaa agcgttggcg
    61501 gcagcactgg gccagattga gaaacaattt ggtaaaggct ccatcatgcg cctgggtgaa
    61561 gaccgttcca tggatgtgga aaccatctct accggttcgc tttcactgga tatcgcgctt
    61621 ggggcaggtg gtctgccgat gggccgtatc gtcgaaatct acggaccgga atcttccggt
    61681 aaaaccacgc tgacgctgca ggtgatcgcc gcagcgcagc gtgaaggtaa aacctgtgcg
    61741 tttatcgatg ctgaacacgc gctggaccca atctacgcac gtaaactggg cgtcgatatc
    61801 gacaacctgc tgtgctccca gccggacacc ggcgagcagg cactggaaat ctgtgacgcc
    61861 ctggcgcgtt ctggtgcagt agacgttatc gtcgttgact ccgtggcggc actgacgccg
    61921 aaagcggaaa tcgaaggcga aatcggcgac tctcacatgg gccttgcggc acgtatgatg
    61981 agccaggcga tgcgtaagct ggcgggtaac ctgaagcagt ccaacacgct gctgatcttc
    62041 atcaaccaga tccgtatgaa aattggtgtg atgttcggta acccggaaac cactaccggt
    62101 ggtaacgcgc tgaaattcta cgcctctgtt cgtctcgaca tccgtcgtat cggcgcggtg
    62161 aaagagggcg aaaacgtggt gggtagcgaa acccgcgtga aagtggtgaa gaacaaaatc
    62221 gctgcaccgt ttaaacaggc tgaatttcag atcctctacg gcgaaggtat caacttctac
    62281 ggcgaactgg ttgacctggg cgtaaaagag aagctgatcg agaaagcagg cgcgtggtac
    62341 agctacaaag gtgagaagat cggtcagggt aaagcgaatg caactgcctg gctgaaagat
    62401 aacccggaaa ccgcgaaaga gatcgagaag aaagtacgtg agttgctgct gagcaacccg
    62461 aactcaacgc cggatttctc tgtagatgac agcgaaggcg tagcagaaac taacgaagat
    62521 ttttaatcgt tcgttattga tgataataga taatgtgtgc acggacggtc ccctcgcccc
    62581 tttggggaga gggttagggt gaggggaaca ggccagcact ggcgtgaaaa attactctca
    62641 cctcgatcct ctaacgaatt gggcctgcgg gaacattctg cacactcatt gactattaaa
    62701 tctgtttatc agcaaaacct gggtcgcatc tgcggccctt ttgctttttt aagttgtaag
    62761 gatatgccat gacagaatca acgtcccgtc gcccggcata tgctcgcctg ttggatcgtg
    62821 cggtacgcat tctggcggtg cgcgatcaca gtgagcaaga actgcgacgt aaactcgcgg
    62881 caccgattat gggcaaaaat ggcccagaag agattgatgc tacggcagaa gattacgagc
    62941 gcgttattgc atggtgccat gaacatggct atctcgatga cagccgattt gttgcgcgct
    63001 ttatcgccag ccgtagccgc aaaggttatg gacctgcacg tattcgtcag gaactgaatc
    63061 agaaaggtat ttcccgcgaa gcgacagaaa aagcgatgcg tgaatgtgac atcgactggt
    63121 gcgcactggc gcgcgatcag gcgacgcgaa aatatgatga acctttgcca actgtctttt
    63181 cagaaaaagt taagatccag cgttttctgc tctatcgtgg ctatctgatg gaagatatcc
    63241 aggatatttg gcgaaatttt gccgactgaa cgcatacggt attttacttc ccagtcaaga
    63301 aaacttatct tattcccact tttcagttac cagcccggcg gttaagacac gctggagctg
    63361 gtggcgatat ttcgttagct tgatttcagg ataattatga gcaagagcac cgctgagatc
    63421 cgtcaggcgt ttctcgactt tttccatagt aagggacatc aggtagttgc cagcagctcc
    63481 ctggtacccc ataacgaccc aactttgttg tttaccaacg ccgggatgaa tcagttcaag
    63541 gatgtgttcc ttgggctcga caagcgtaat tattcccgcg ctaccacttc ccaacgctgc
    63601 gtgcgtgcgg gtggtaaaca caacgacctg gaaaacgtcg gttacaccgc gcgtcaccat
    63661 accttcttcg aaatgctggg caacttcagc ttcggcgact atttcaaaca cgatgccatt
    63721 cagtttgcat gggaactgct gaccagcgaa aaatggtttg ccctgccgaa agagcgtctg
    63781 tgggttaccg tctatgaaag cgacgacgaa gcctacgaaa tctgggaaaa agaagtcggg
    63841 atcccgcgcg aacgtattat tcgcatcggc gataacaaag gtgcgccata cgcatctgac
    63901 aacttctggc agatgggtga cactggtccg tgcggcccgt gcaccgaaat cttctacgat
    63961 cacggcgacc acatttgggg tggccctccg ggaagtccgg aagaagacgg cgaccgctac
    64021 attgagatct ggaacatcgt cttcatgcag ttcaaccgcc aggcagatgg cacgatggaa
    64081 ccgctgccga agccgtctgt agataccggt atgggtctgg agcgtattgc tgcggtgctg
    64141 caacacgtta actctaacta tgacatcgac ctgttccgca cgttgatcca ggcggtagcg
    64201 aaagtcactg gcgcgaccga tctgagcaat aaatcgctgc gcgtaatcgc tgaccacatt
    64261 cgttcttgtg cgttcctgat cgcggatggc gtaatgccgt ccaatgaaaa ccgtggttat
    64321 gtactgcgtc gtatcattcg tcgcgcagtg cgtcacggca atatgctcgg cgcgaaagaa
    64381 accttcttct acaaactggt tggtccgctg atcgacgtta tgggctctgc gggtgaagac
    64441 ctgaaacgcc agcaggcgca ggttgagcag gtgctgaaga ctgaagaaga gcagtttgcc
    64501 cgtactctgg agcgcggtct ggcgttgctg gatgaagagc tggcaaaact ttctggtgat
    64561 acgctggatg gtgaaacggc tttccgtctg tacgacacct atggcttccc ggttgacctg
    64621 acggctgatg tttgtcgtga gcgcaacatc aaagttgacg aagctggttt tgaagcagca
    64681 atggaagagc agcgtcgtcg cgcgcgcgaa gccagcggct ttggtgccga ttacaacgca
    64741 atgatccgtg ttgatagtgc atctgaattt aaaggctatg accatctgga actgaacggc
    64801 aaagtgaccg cgctgtttgt tgatggtaaa gcggttgatg ccatcaatgc aggccaggaa
    64861 gctgtggtcg tgctagatca aacaccattc tatgcggaat ccggcggtca ggttggtgat
    64921 aaaggcgaac tgaaagacgc taacttctcc ttcgcggtgg aagatacgca gaaatacggc
    64981 caggcgattg gtcacatcgg taaacttgct gcgggttctc tgaaagtggg cgacgctgtg
    65041 caggctgatg ttgatgaggc tcgtcgcgcc cgtattcgtc tgaatcactc cgcaacgcac
    65101 ctgatgcacg ctgcgctgcg ccaggttctg gggactcatg tatcgcagaa aggttcactg
    65161 gttaacgaca aggtgctgcg cttcgacttc tcacacaacg aagcgatgaa accggaagag
    65221 attcgtgcgg tcgaagacct ggtgaacgca cagattcgtc gcaatttgcc gatcgaaacc
    65281 aacatcatgg atctcgaagt ggcgaaagcg aaaggtgcga tggcgctgtt cggcgagaag
    65341 tatgatgagc gtgtacgcgt gctgagcatg ggcgatttct ccaccgagct gtgtggcggt
    65401 actcacgcca gccgcactgg tgatattggt ctgttccgca tcatctctga atcgggtact
    65461 gctgcaggcg ttcgtcgtat cgaagcggta accggagaag gcgctatcac caccgttcat
    65521 gcagacagcg atcgcttaag cgaagtcgcg catctgctga aaggcgatag caataatctg
    65581 gcggataaag tgcgctcagt actggaacgt acgcgtcagt tagaaaaaga actacaacag
    65641 cttaaagaac aagctgccgc acaggagagc gcaaatcttt ccagtaaggc aattgatgtt
    65701 aatggtgtta agctgttggt tagcgagctt agcggtgttg agccgaaaat gttgcgtacc
    65761 atggttgacg atttaaaaaa tcagctgggg tcgacaatta tcgtgctggc aacggtagcc
    65821 gaaggtaagg tttctctgat tgcaggcgta tctaaggacg tcacagatcg tgtgaaagca
    65881 ggggaactga ttggtatggt cgctcagcag gtgggcggca agggtggtgg acgtcctgac
    65941 atggcgcaag ccggtggtac ggatgctgcg gccttacctg cagcgttagc cagtgtgaaa
    66001 ggctgggtca gcgcgaaatt gcaataatat aagcgtcagg caatgccgtg gactcgcttc
    66061 acggcattcg cattaacgct atcgacaacg ataaagtcag gttgaagttg tgtatatcgg
    66121 ctaaacttag gtttaacaga atgtaatgcc atgactgctt acatgtaatg tgtttgtcat
    66181 tgcttacttt ttggcgttat atgatggata atgccgggat acagagagac ccgactcttt
    66241 taatctttca aggagcaaag aatgctgatt ctgactcgtc gagttggtga gaccctcatg
    66301 attggggatg aggtcaccgt gacagtttta ggggtgaagg gcaaccaggt acgtattggc
    66361 gtaaatgccc cgaaggaagt ttctgttcac cgtgaagaga tctaccagcg tatccaggct
    66421 gaaaaatccc agcagtccag ttactaatct ttccgcgtct catctttatc ggtgagacgc
    66481 accctcaaaa tttctccttc actctatagt cttttcgctt tactcccgtt cattcaactt
    66541 aagtctccat ttttttgcat tactgctatc tgccagacct ccgtttttct gtagataaaa
    66601 cactcttttt gacgttttta cagactaatt gagcgtgaag tgtgcaaacg ataaaagtgt
    66661 gggaaaaatt gtttgactta taagtctcag aaagtaatat ggcgccacgc agcgacgatg
    66721 agcgataaac aagttcttcg aagcactcgt aagaggcgtg tggtgaggtg gccgagaggc
    66781 tgaaggcgct cccctgctaa gggagtatgc ggtcaaaagc tgcatccggg gttcgaatcc
    66841 ccgcctcacc gccat
//
LOCUS       DADMIB010000005        66342 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.005, whole genome shotgun sequence.
ACCESSION   DADMIB010000005 DADMIB010000000
VERSION     DADMIB010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 66342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66342
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.005"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(128..607)
                     /gene="folK"
                     /locus_tag="JNZ89_000342"
     CDS             complement(128..607)
                     /gene="folK"
                     /locus_tag="JNZ89_000342"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HAY8934319.1"
                     /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTP
                     PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQDRVRKAERWGPRTLDLDIMLF
                     GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDELSKW"
     gene            complement(604..2022)
                     /gene="pcnB"
                     /locus_tag="JNZ89_000343"
     CDS             complement(604..2022)
                     /gene="pcnB"
                     /locus_tag="JNZ89_000343"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000174652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HAY8934320.1"
                     /translation="MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQH
                     AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKL
                     FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGS
                     IEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLR
                     AVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEY
                     HLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLL
                     ETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
                     KRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDE
                     EPSPRRRTRRPRKRAPRREGTA"
     gene            complement(2061..2987)
                     /gene="gluQRS"
                     /locus_tag="JNZ89_000344"
     CDS             complement(2061..2987)
                     /gene="gluQRS"
                     /locus_tag="JNZ89_000344"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HAY8934321.1"
                     /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR
                     ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL
                     HEQGLSYYCTCTRARIQSIVGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII
                     HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF
                     GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQVEAHWQDFS
                     VEQILQSAVKNWTLTAVPESAIVNSTFSNASC"
     gene            complement(3024..3479)
                     /locus_tag="JNZ89_000345"
     CDS             complement(3024..3479)
                     /locus_tag="JNZ89_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding transcription factor
                     DksA"
                     /protein_id="HAY8934322.1"
                     /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL
                     EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
                     LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
     gene            complement(3657..4361)
                     /gene="sfsA"
                     /locus_tag="JNZ89_000346"
     CDS             complement(3657..4361)
                     /gene="sfsA"
                     /locus_tag="JNZ89_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HAY8934323.1"
                     /translation="MEFSPLLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC
                     ATRGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS
                     GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH
                     LRELMNVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE
                     ISAEGMALKKSLPVTL"
     gene            complement(4376..4906)
                     /gene="thpR"
                     /locus_tag="JNZ89_000347"
     CDS             complement(4376..4906)
                     /gene="thpR"
                     /locus_tag="JNZ89_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HAY8934324.1"
                     /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL
                     TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL
                     ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA
                     RGRTRYTPLKRWALMQ"
     gene            4980..7409
                     /gene="hrpB"
                     /locus_tag="JNZ89_000348"
     CDS             4980..7409
                     /gene="hrpB"
                     /locus_tag="JNZ89_000348"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HAY8934325.1"
                     /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH
                     PGINGKIILLEPRRLAARNVAQRLEELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG
                     VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD
                     NDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLF
                     LPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE
                     TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLH
                     LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVNLLAAKRL
                     LQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMG
                     NSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDG
                     RYQLANGMGAMLDADDALSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRCPQL
                     VQQSDTVEWDDAQGTLKAWRRLQIGLLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVL
                     NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLATLETWLLPHMTGVHSLRGLKSLD
                     IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN
                     PTIAQGRVPLVLELLSPAQSPLQITRDLSAFWKGAYREVQKEMKGRYPKHVWPDDPAN
                     TAPTRRTKKYS"
     gene            7605..10127
                     /gene="mrcB"
                     /locus_tag="JNZ89_000349"
     CDS             7605..10127
                     /gene="mrcB"
                     /locus_tag="JNZ89_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyl
                     transferase/transpeptidase"
                     /protein_id="HAY8934326.1"
                     /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE
                     PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL
                     PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD
                     FPDSKEGQVRAHLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR
                     SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL
                     FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY
                     FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD
                     MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA
                     EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI
                     GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGLVWSPQNDDRRYSESGRVMLV
                     DALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA
                     FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT
                     GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWAGRDNNQPTKLYGASGAM
                     SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRVLPVWTSDPQSLCQQSE
                     MQQQPSGNPFDQSSQPQQQPAQQEQKDSDGVAGWIKDMFGSN"
     gene            10347..12536
                     /gene="fhuA"
                     /locus_tag="JNZ89_000350"
     CDS             10347..12536
                     /gene="fhuA"
                     /locus_tag="JNZ89_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrichrome porin FhuA"
                     /protein_id="HAY8934327.1"
                     /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV
                     TAAPAPQESAWGPAATIAAKHSATATKTDTPIEKTPQSISVVTNEEMQMHQFQSVKEA
                     LGYTPGVTVSSRGASNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLE
                     RVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALD
                     DNGEFSYRLTGLARSTNEQQKNSESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGY
                     YGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFEHGFNDTFTVRQNLR
                     FSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLT
                     GVDFMRMRNDINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEW
                     NKWVFTLGGRYDWSKQATTVRENSYTPTEGYIERNDHQFTWRGGVNYLFDNGISPYFS
                     YSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDMPVVVTGAVYQLTKTNNLTA
                     DPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQV
                     PEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLA
                     RFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQVVATATFRF"
     gene            12587..13384
                     /gene="fhuC"
                     /locus_tag="JNZ89_000351"
     CDS             12587..13384
                     /gene="fhuC"
                     /locus_tag="JNZ89_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /protein_id="HAY8934328.1"
                     /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG
                     HNGSSKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV
                     RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
                     LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYL
                     VALRGGEMIAQGTPAEIMRGDTLEMIYGIPMGILPHPAGAAPVSFVY"
     gene            13384..14274
                     /gene="fhuD"
                     /locus_tag="JNZ89_000352"
     CDS             13384..14274
                     /gene="fhuD"
                     /locus_tag="JNZ89_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HAY8934329.1"
                     /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL
                     PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW
                     SAGYGPSAEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED
                     FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG
                     STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG
                     ATLSAMHFVRVLDNAIGGKA"
     gene            14271..16253
                     /gene="fhuB"
                     /locus_tag="JNZ89_000353"
     CDS             14271..16253
                     /gene="fhuB"
                     /locus_tag="JNZ89_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter permease
                     FhuB"
                     /protein_id="HAY8934330.1"
                     /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP
                     DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
                     ITVTTLWAIPGAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI
                     NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD
                     DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR
                     LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM
                     KVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWMWASGALLDDLMPWRWP
                     RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
                     LPAGSIGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV
                     LTWISGSTYNATDAQVWRTGIVMVILLAITPLYRRWLTILPLGGDTARAVGMALTPTR
                     IALLLLAACLTATSTMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA
                     DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR"
     gene            complement(16288..17568)
                     /gene="hemL"
                     /locus_tag="JNZ89_000354"
     CDS             complement(16288..17568)
                     /gene="hemL"
                     /locus_tag="JNZ89_000354"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HAY8934331.1"
                     /translation="MSKSENLYSAARELLPGGVNSPVRAFTGVGGTPLFIEKADGAYL
                     YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL
                     VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
                     GQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPQPE
                     FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF
                     GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEG
                     LLEAAEEAGTPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY
                     LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL"
     gene            17793..19214
                     /gene="clcA"
                     /locus_tag="JNZ89_000355"
     CDS             17793..19214
                     /gene="clcA"
                     /locus_tag="JNZ89_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HAY8934332.1"
                     /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT
                     LVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP
                     EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR
                     MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV
                     FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM
                     QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV
                     FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVVVELFPQYHLEAGTFAIA
                     GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSEILA
                     RTLAKQEAEQLARSKAASASENT"
     gene            19238..19303
                     /locus_tag="JNZ89_000356"
     CDS             19238..19303
                     /locus_tag="JNZ89_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934333.1"
                     /translation="MAIIIGLEFAQLPMSFGAKYE"
     gene            19296..19640
                     /gene="erpA"
                     /locus_tag="JNZ89_000357"
     CDS             19296..19640
                     /gene="erpA"
                     /locus_tag="JNZ89_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HAY8934334.1"
                     /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
                     FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
                     KSTCGCGSSFSI"
     gene            complement(19687..20310)
                     /locus_tag="JNZ89_000358"
     CDS             complement(19687..20310)
                     /locus_tag="JNZ89_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HAY8934335.1"
                     /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
                     TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV
                     GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
                     HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR"
     gene            complement(20353..21147)
                     /gene="btuF"
                     /locus_tag="JNZ89_000359"
     CDS             complement(20353..21147)
                     /gene="btuF"
                     /locus_tag="JNZ89_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005024031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter substrate-binding
                     protein BtuF"
                     /protein_id="HAY8934336.1"
                     /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP
                     VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASPGI
                     KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFL
                     QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP
                     DQIPKIKQYWGEQLKIPVIPLTSDWFDVQAHVLSSLHNSSVMRFHR"
     gene            complement(21140..21838)
                     /gene="mtnN"
                     /locus_tag="JNZ89_000360"
     CDS             complement(21140..21838)
                     /gene="mtnN"
                     /locus_tag="JNZ89_000360"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HAY8934337.1"
                     /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA
                     LLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV
                     TAFGYEYGQLPGCPAGFEADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK
                     IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
                     SLMVESLVQKLAHG"
     gene            21922..23439
                     /gene="dgt"
                     /locus_tag="JNZ89_000361"
     CDS             21922..23439
                     /gene="dgt"
                     /locus_tag="JNZ89_000361"
                     /EC_number="3.1.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dGTPase"
                     /protein_id="HAY8934338.1"
                     /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
                     IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRMKELKLLEAYGLDEL
                     TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL
                     RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
                     RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD
                     LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM
                     YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS
                     HPDVEQLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR
                     HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ"
     gene            23569..24993
                     /gene="degP"
                     /locus_tag="JNZ89_000362"
     CDS             23569..24993
                     /gene="degP"
                     /locus_tag="JNZ89_000362"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegP"
                     /protein_id="HAY8934339.1"
                     /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM
                     LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN
                     GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS
                     DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA
                     ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL
                     TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD
                     VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS
                     IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV
                     LDSKPSVLALNIQRGDSTIYLLMQ"
     gene            25148..26305
                     /locus_tag="JNZ89_000363"
     CDS             25148..26305
                     /locus_tag="JNZ89_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdaR family transcriptional regulator"
                     /protein_id="HAY8934340.1"
                     /translation="MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI
                     GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR
                     KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDL
                     NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS
                     FGRWDAEDHRKRVEQLITRMKEYGRLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ
                     RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHN
                     VQPLATSKALFIYRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER"
     gene            complement(26394..26780)
                     /locus_tag="JNZ89_000364"
     CDS             complement(26394..26780)
                     /locus_tag="JNZ89_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3461 family protein"
                     /protein_id="HAY8934341.1"
                     /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK
                     SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD
                     DLRHLESVVTNKISEIEADLEKLTRK"
     gene            complement(26942..27754)
                     /gene="yaeI"
                     /locus_tag="JNZ89_000365"
     CDS             complement(26942..27754)
                     /gene="yaeI"
                     /locus_tag="JNZ89_000365"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414706.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase YaeI"
                     /protein_id="HAY8934342.1"
                     /translation="MISRRRLLQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKD
                     NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFS
                     DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSVGITVLFNQATVIATPNRQFE
                     LVGTGDLWAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVP
                     LVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV"
     gene            complement(27809..28633)
                     /gene="dapD"
                     /locus_tag="JNZ89_000366"
     CDS             complement(27809..28633)
                     /gene="dapD"
                     /locus_tag="JNZ89_000366"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HAY8934343.1"
                     /translation="MQQLQNIIETAFERRAEITPTNADTVTREAVNQVIALLDSGALR
                     VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG
                     FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE
                     TGEIHYGHVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
     gene            complement(28664..31336)
                     /gene="glnD"
                     /locus_tag="JNZ89_000367"
     CDS             complement(28664..31336)
                     /gene="glnD"
                     /locus_tag="JNZ89_000367"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HAY8934344.1"
                     /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ
                     RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP
                     LSDIDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT
                     NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
                     IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL
                     HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF
                     DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGI
                     YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ
                     WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF
                     IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
                     DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
                     LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW
                     HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
                     FTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF
                     TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED
                     LFIIATADRRALNNELQQEVHQRLTEALNPNDKG"
     gene            complement(31398..32192)
                     /gene="map"
                     /locus_tag="JNZ89_000368"
     CDS             complement(31398..32192)
                     /gene="map"
                     /locus_tag="JNZ89_000368"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HAY8934345.1"
                     /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI
                     CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK
                     DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
                     GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK
                     DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE"
     gene            32560..33285
                     /gene="rpsB"
                     /locus_tag="JNZ89_000369"
     CDS             32560..33285
                     /gene="rpsB"
                     /locus_tag="JNZ89_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HAY8934346.1"
                     /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
                     KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
                     LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA
                     ATVREGRSQDLASQAEESFVEAE"
     gene            33543..34394
                     /gene="tsf"
                     /locus_tag="JNZ89_000370"
     CDS             33543..34394
                     /gene="tsf"
                     /locus_tag="JNZ89_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HAY8934347.1"
                     /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
                     GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA
                     GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG
                     ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
                     RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV
                     AAMSKQS"
     gene            34541..35266
                     /gene="pyrH"
                     /locus_tag="JNZ89_000371"
     CDS             34541..35266
                     /gene="pyrH"
                     /locus_tag="JNZ89_000371"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HAY8934348.1"
                     /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
                     VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
                     RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
                     VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF
                     NMNKPGALRRVVMGEKEGTLITE"
     gene            35558..36115
                     /gene="frr"
                     /locus_tag="JNZ89_000372"
     CDS             35558..36115
                     /gene="frr"
                     /locus_tag="JNZ89_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HAY8934349.1"
                     /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY
                     YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL
                     PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV
                     QKLTDAAIKKIEAALADKEAELMQF"
     gene            36207..37403
                     /gene="ispC"
                     /locus_tag="JNZ89_000373"
     CDS             36207..37403
                     /gene="ispC"
                     /locus_tag="JNZ89_000373"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HAY8934350.1"
                     /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE
                     QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV
                     GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL
                     PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI
                     SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
                     RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA
                     LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE
                     VMRLAS"
     gene            37591..38349
                     /gene="ispU"
                     /locus_tag="JNZ89_000374"
                     /gene_synonym="uppS"
     CDS             37591..38349
                     /gene="ispU"
                     /locus_tag="JNZ89_000374"
                     /gene_synonym="uppS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308203.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl-diphosphate-specific
                     ditrans,polycis-undecaprenyl-diphosphate synthase"
                     /protein_id="HAY8934351.1"
                     /translation="MLSATQLLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKA
                     GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH
                     NVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEK
                     VQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFIDV
                     LWPDFDEQDFEGALNAFANRERRFGGTEPGDETA"
     gene            38362..39219
                     /gene="cdsA"
                     /locus_tag="JNZ89_000375"
     CDS             38362..39219
                     /gene="cdsA"
                     /locus_tag="JNZ89_000375"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414717.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HAY8934352.1"
                     /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG
                     QLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVSLLL
                     VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL
                     VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPV
                     TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC
                     LLLLVFRTL"
     gene            39231..40583
                     /gene="rseP"
                     /locus_tag="JNZ89_000376"
     CDS             39231..40583
                     /gene="rseP"
                     /locus_tag="JNZ89_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma E protease regulator RseP"
                     /protein_id="HAY8934353.1"
                     /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF
                     GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA
                     AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP
                     DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR
                     GLQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI
                     ERQGSPLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT
                     WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI
                     INLFPLPVLDGAHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
                     "
     gene            40613..43045
                     /gene="bamA"
                     /locus_tag="JNZ89_000377"
     CDS             40613..43045
                     /gene="bamA"
                     /locus_tag="JNZ89_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HAY8934354.1"
                     /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
                     SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
                     KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR
                     NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK
                     LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN
                     LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
                     VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL
                     GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
                     GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS
                     YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK
                     TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD
                     HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY
                     DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD
                     MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
                     AEQFQFNIGKTW"
     gene            43167..43652
                     /gene="skp"
                     /locus_tag="JNZ89_000378"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
     CDS             43167..43652
                     /gene="skp"
                     /locus_tag="JNZ89_000378"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone Skp"
                     /protein_id="HAY8934355.1"
                     /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN
                     TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE
                     QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV
                     K"
     gene            43656..44681
                     /gene="lpxD"
                     /locus_tag="JNZ89_000379"
     CDS             43656..44681
                     /gene="lpxD"
                     /locus_tag="JNZ89_000379"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HAY8934356.1"
                     /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN
                     PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP
                     SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI
                     YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG
                     ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
                     MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE
                     RKVNQQD"
     gene            44786..45241
                     /gene="fabZ"
                     /locus_tag="JNZ89_000380"
     CDS             44786..45241
                     /gene="fabZ"
                     /locus_tag="JNZ89_000380"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000210741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HAY8934357.1"
                     /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
                     SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
                     RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
     gene            45245..46033
                     /gene="lpxA"
                     /locus_tag="JNZ89_000381"
     CDS             45245..46033
                     /gene="lpxA"
                     /locus_tag="JNZ89_000381"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HAY8934358.1"
                     /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVGIGEGTVL
                     KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
                     VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
                     QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA
                     YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFSRSTRGLIR"
     gene            46033..47181
                     /gene="lpxB"
                     /locus_tag="JNZ89_000382"
     CDS             46033..47181
                     /gene="lpxB"
                     /locus_tag="JNZ89_000382"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HAY8934359.1"
                     /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGP
                     RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF
                     NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP
                     CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL
                     LRQTYPDLEIVVPLVNAKRREQFERIKAEVARDFSVHLLDGMGREAMVASDAALLASG
                     TAALECMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP
                     QKLAAALLPLLANGKISHAMHDTFRELHQQIRCNADEQAAQAVLELAQ"
     gene            47178..47774
                     /gene="rnhB"
                     /locus_tag="JNZ89_000383"
     CDS             47178..47774
                     /gene="rnhB"
                     /locus_tag="JNZ89_000383"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HAY8934360.1"
                     /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN
                     DSKKLSEKRRLALCEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
                     EYVLIDGNRCPKLPMPAMAVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA
                     QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS"
     gene            47811..51293
                     /gene="dnaE"
                     /locus_tag="JNZ89_000384"
     CDS             47811..51293
                     /gene="dnaE"
                     /locus_tag="JNZ89_000384"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HAY8934361.1"
                     /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF
                     TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS
                     KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE
                     HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA
                     IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY
                     FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERVKRRPEYDERLETELQVINQ
                     MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
                     NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
                     HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA
                     GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
                     WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
                     PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG
                     IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGVNAEL
                     AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
                     GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG
                     GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK
                     AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE
                     IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML
                     FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYASGLAISL
                     TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL
                     RGLIGSEQVELEFD"
     gene            51306..52265
                     /gene="accA"
                     /locus_tag="JNZ89_000385"
     CDS             51306..52265
                     /gene="accA"
                     /locus_tag="JNZ89_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HAY8934362.1"
                     /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
                     EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
                     GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF
                     IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN
                     MLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
                     RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA"
     gene            52364..54473
                     /gene="ldcC"
                     /locus_tag="JNZ89_000386"
                     /pseudo
     CDS             52364..54473
                     /gene="ldcC"
                     /locus_tag="JNZ89_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414728.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase LdcC"
     gene            54530..54919
                     /locus_tag="JNZ89_000387"
     CDS             54530..54919
                     /locus_tag="JNZ89_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY8934363.1"
                     /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW
                     KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEA
                     IRVDPYTQKRFTFFNDPDGLPLELYEQ"
     gene            54984..56282
                     /gene="tilS"
                     /locus_tag="JNZ89_000388"
     CDS             54984..56282
                     /gene="tilS"
                     /locus_tag="JNZ89_000388"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HAY8934364.1"
                     /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTL
                     RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA
                     RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR
                     GELAQWALAHGLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE
                     QESLLDELLADDLAHCQTSQGTLQIAPMLAMSDARRAAIIRRWLAGQNAPMPSRDALV
                     RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSETIVPWQTWLQPLELPA
                     GLGSVQLTAGGDIRPPRADEAVSVRFKSAGLLHIVGRNGGRKLKKIWQELGVPPWLRD
                     TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS"
     gene            complement(56331..56591)
                     /gene="rof"
                     /locus_tag="JNZ89_000389"
     CDS             complement(56331..56591)
                     /gene="rof"
                     /locus_tag="JNZ89_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho-binding antiterminator"
                     /protein_id="HAY8934365.1"
                     /translation="MLMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD
                     LVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES"
     gene            complement(56578..56778)
                     /locus_tag="JNZ89_000390"
     CDS             complement(56578..56778)
                     /locus_tag="JNZ89_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeP family protein"
                     /protein_id="HAY8934366.1"
                     /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS
                     EAVREKAAYAAANLLVSDYVNE"
     gene            56944..57489
                     /locus_tag="JNZ89_000391"
     CDS             56944..57489
                     /locus_tag="JNZ89_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HAY8934367.1"
                     /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL
                     LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV
                     ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV
                     IWLSDDKNNLEVNLTAWQQPS"
     gene            57486..57908
                     /gene="arfB"
                     /locus_tag="JNZ89_000392"
     CDS             57486..57908
                     /gene="arfB"
                     /locus_tag="JNZ89_000392"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HAY8934368.1"
                     /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR
                     ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQ
                     KARRPTRPTRASKERRLASKAQKSSAKAMRGKVRSGRE"
     gene            57922..58632
                     /gene="nlpE"
                     /locus_tag="JNZ89_000393"
                     /gene_synonym="cutF"
     CDS             57922..58632
                     /gene="nlpE"
                     /locus_tag="JNZ89_000393"
                     /gene_synonym="cutF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308221.1"
                     /note="NlpE, an outer membrane lipoprotein, interacts
                     directly with CpxA, the sensor histidine kinase of the Cpx
                     system for response to envelope stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response activation lipoprotein
                     NlpE"
                     /protein_id="HAY8934369.1"
                     /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS
                     WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD
                     SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAA
                     TFTDCATGKRFMVANNAELERGYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLA
                     PDTAGKFYPNKDCSSLGQ"
     gene            complement(58832..59652)
                     /locus_tag="JNZ89_000394"
                     /pseudo
     CDS             complement(58832..59652)
                     /locus_tag="JNZ89_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414735.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YaeF family permuted papain-like enzyme"
     gene            complement(59705..61423)
                     /gene="proS"
                     /locus_tag="JNZ89_000395"
     CDS             complement(59705..61423)
                     /gene="proS"
                     /locus_tag="JNZ89_000395"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HAY8934370.1"
                     /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
                     TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
                     PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA
                     YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE
                     DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
                     TVKTLLVKAVEGSSFPLVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG
                     PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA
                     GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
                     VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
                     LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
                     VKQIKG"
     gene            complement(61534..62241)
                     /gene="tsaA"
                     /locus_tag="JNZ89_000396"
     CDS             complement(61534..62241)
                     /gene="tsaA"
                     /locus_tag="JNZ89_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HAY8934371.1"
                     /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ
                     ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
                     SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
                     MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNV
                     RWRVTDAGFEVFALEPR"
     gene            complement(62238..62642)
                     /gene="rcsF"
                     /locus_tag="JNZ89_000397"
     CDS             complement(62238..62642)
                     /gene="rcsF"
                     /locus_tag="JNZ89_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rcs stress response system protein RcsF"
                     /protein_id="HAY8934372.1"
                     /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP
                     RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN
                     AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK"
     gene            complement(62760..63575)
                     /gene="metQ"
                     /locus_tag="JNZ89_000398"
     CDS             complement(62760..63575)
                     /gene="metQ"
                     /locus_tag="JNZ89_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HAY8934373.1"
                     /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ
                     VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK
                     LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
                     VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
                     FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
     gene            complement(63615..64268)
                     /gene="metI"
                     /locus_tag="JNZ89_000399"
     CDS             complement(63615..64268)
                     /gene="metI"
                     /locus_tag="JNZ89_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease MetI"
                     /protein_id="HAY8934374.1"
                     /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
                     QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP
                     FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY
                     SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK"
     gene            complement(64261..65292)
                     /gene="metN"
                     /locus_tag="JNZ89_000400"
     CDS             complement(64261..65292)
                     /gene="metN"
                     /locus_tag="JNZ89_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HAY8934375.1"
                     /translation="MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGK
                     STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN
                     VALPLELDNTPKDEIKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK
                     VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
                     LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ
                     SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH
                     VKVEVLGYV"
     gene            65480..66052
                     /gene="gmhB"
                     /locus_tag="JNZ89_000401"
     CDS             65480..66052
                     /gene="gmhB"
                     /locus_tag="JNZ89_000401"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HAY8934376.1"
                     /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK
                     MGFVLVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE
                     FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKP
                     ITPEAENAADWVLNSLADLPQAIKKQQKPA"
BASE COUNT        15757 a        16438 c        18205 g        15942 t
ORIGIN      
        1 tgggattgat atttatctgc gggaatttat attatgtttc tgcaaaaatg tttaaactaa
       61 aatttttatt aaggaaagag aggatgtatg attttcagaa aatatttata ttcgtaatat
      121 aaataaatta ccatttgctt aattcgtcaa atgctcttgt atgtaagact tcacgcaacg
      181 tctccccatc aggaaacgcc agctccggtg caatctcaaa cagcggccac agcataaatc
      241 cacgattctt catatcgtag tgcggaacgg tcaggcgttc ggtatttatc acttcattac
      301 caaacagcat gatatcgaga tccagcgtgc gtggtcccca gcgttcagct ttacgaacac
      361 gatcctgttg cagttctatg cgctgtgtat ggttgagtaa ctcttccggg gcgagcgaag
      421 tttcaagcgc cacggcggcg ttgaggtaat cgggttgatc ttgcggcccc agcggtggag
      481 tgcggtaaaa cgaagaaacg gcaagaatgt ggctttcagg gatatcgcct aatgctttca
      541 gggcagcatt gacctgctcc agcggagagg ccagattgct gcctatggca atatacgcca
      601 ctgtcatgcg gtaccctcac gacgcggtgc gcgtttgcgt ggacgacgag tacggcgacg
      661 cggtgacggc tcttcatcca actcgttaag catccctttt tgatctggtg gcgcggaaac
      721 ctggaactca ccccaccatt tcaccagacg ctgcagttca gcgttacgtt caacttcagc
      781 tcgcaaggcc aacaggtcat aagccgcacg gaacttagga tgctccagca gtttccatgc
      841 gcgtttaccc tgacgacggg acatacgcaa ctgcaactgc cagatatcgc gggttaacgt
      901 cgtcagacgt ttcgggattg ccagtgaacg gcaggcttcg tccagcacgt cgttcatcgc
      961 cagcgcgaaa gcgtcgtgat aggtcaggcc gctttcctgg gcgatcttct gtgccgtctc
     1021 cagcagtggg taccagaaca tggcggcaaa caagaacgcc gggttcacgc gcatatcgtt
     1081 atggatacgc gtatcggtat tcttcagcac ctgttcaatg atccgctcca tcgggctgtc
     1141 gccattttcc gtgaagtagc gggtaatggt cgggaacagc ggctggaaca gatgatattc
     1201 acacaacagc ttataggttt cgtaaccgta gcccgcttgt agcagtttaa gcgattcttc
     1261 aaacaggcgt gccggtggga tatcgttcag cagggtagcg aggcgaggga tcggttctgc
     1321 ggtttccggg ctgatgcgca tacccaattt ggcggcaaaa cgtaccgcgc gcagcatacg
     1381 taccggatct tcacggtagc gcgtttccgg gttaccaatc agacggataa cgccgtcctt
     1441 cagatccttc atgccgccaa cgtaatcacg gacggtaaaa tccgctacgc tgtaatacag
     1501 gctgttgata gtgaaatcgc ggcgctgggc gtcttcttcg atggagccga aaatgttgtc
     1561 gcgcagcaac atgccgtttt gcccgcgttg ggaggtcgtg cggtcgctga cgttaccttc
     1621 gtggtgtcca cggaaggttg caacttcgat aatctccggg ccaaacatca catgagccag
     1681 acggaaacgg cgacccacaa ggcggcagtt acggaacagt ttgcgcacct gctcaggcgt
     1741 ggcgttagtg gttacgtcaa aatctttcgg ctttttgcca agtaacaggt cgcgcacgcc
     1801 gccgccaacc agccaggctt cgtatcccgc tttattgagc ctgtacatta ccttcagggc
     1861 attttcactg atatctttgc gggaaatagc atgctgctca cgcgggatca ccgtcacctg
     1921 tggacgggcg actgcctgtt cagcctcgct ttcctcgcgg cttagcacct tgcggcaaaa
     1981 attagcgact cgggtaaaaa tagtacacct cggtagtgtc aaacatcatt caggacaaaa
     2041 aaatagcggc taatcatagc tcagcatgac gcatttgaga atgttgaatt tacaattgcc
     2101 gactcgggca cggcggtcag cgtccagttt ttgacggctg actgaaggat ttgctcgacg
     2161 ctgaaatcct gccagtgtgc ttctacctgc tgccccagaa attgaagtgc cgcgattagt
     2221 accgggcgtg gatcgccttt cggcaacgca ggcgcatgat tctgcttgga aagtttagcg
     2281 ccttgtggat taagcgccag cggcagatga atgtaatctg gcactttcca gccaaaaagc
     2341 tggtacagcg agatttgcct tactgttggt tcaatcagat cagccccacg cactatttct
     2401 gtaacgccct ggaaatgatc atcaaccaca acagccaggt tgtaggcgaa caacccatca
     2461 cggcgatgaa tgataaaatc ttcccgtgcc agtttttcgt cggcgtgaat aatgccgcgc
     2521 agctggtcag taaattgcgt gaccggatgc tgctggcgga tacgcactgc ggcgttgtct
     2581 ggtccatgat gcaacacccg gcaatgaccg tcgtaaatac cgacaatgct ttgaatacgc
     2641 gcacgcgtac aggtgcagta ataacttagt ccttgttcat gtaaccaggc gagtgcttca
     2701 cgataggcgt cgtgacgttg cgattgccag agaacatcgc cgtcccagtg cagaccgtaa
     2761 tgttccagct ggcgcaggat agtttctgcg gcaccgggaa cttcacgagg cgggtcgata
     2821 tcttctatgc gtaccagcca gcgaccttgc cgggcgcgag cctgcaaata gctgccgagc
     2881 gcggcgatca gagagccaaa atgaagctcg ccggaaggag agggggcgaa gcggccaata
     2941 tactgtgtgt ctgtcatctc tttgaacaaa aaataaggcg ggagcatttc ccgcctgtgg
     3001 taaacgtgat ggaacggctg taattagcca gccatctgtt tttcgcgaat ttcagccagc
     3061 gttttgcagt cgatgcacag atcggctgtc gggcgcgctt ccagacggcg aataccaatt
     3121 tcaacaccgc aggattcgca gtagccgaaa tcttcgtctt ccactttttt cagcgtcttc
     3181 tcgatctttt tgatcagctt acgctcgcga tcgcggttac gcagttcgag gctgaactct
     3241 tcttcctggg ctgcacggtc taccgggtcc gggaagttgg ctgcttcatc ctgcatatgt
     3301 gtaacggtgc gatcgacttc atccctgagt tgattacgcc atgcttccag aatacgacgg
     3361 aagtgcgcca gctgggcttc attcatatac tcttcgcccg gcttctcctg atatggttcc
     3421 accccagcga tggcgagaat actcagggac gatgttttac ggttttgccc ttcttgcatg
     3481 ttgcttctcc ttaacacgca ctatcgatcc ccatgttcgg gggaaaaatg aggccgctat
     3541 aaatagcaga tgcttttccg gatagcaatt atctaaacgt aacacttgac aactgtgtga
     3601 ggaaaagcgt atttgcgcac gcgaccagaa tgtaaattaa ccagttactt actttactac
     3661 aatgtaaccg gcagtgattt tttaagagcc atgccttcag cagaaatttc cgctttgtaa
     3721 gccagaattt ctacccccct ctgttgagct tctgacaata gttgcgcgta tttctcatcg
     3781 atgtggcgcg cgggtgaaaa ccgtgtaatg gctgaatgca gcacggcgaa aaagataacc
     3841 gcacgctggc cttcagccgc tacgttcatc aactcccgaa ggtgtttctg acctcgttca
     3901 gtgaccgcat cgggaaaata tccctgttcg ttctccgcta acgtaaccga tttcacttca
     3961 atatagcagt ctggacgcga atccgcctgc aacataaagt caatacggct gcgttctgcg
     4021 ccatatttta cttcgctttt cagcgagcta tagcctgaca gttctgaaat tgattcatta
     4081 aggatagcct ctttcgtcaa cctgttagcc caaagcgtat tgacgcaaat aaatgcgccg
     4141 ctctggcttt gagttagttc ccaggtgtgt gggtatttcc gtttggtgtt gtctgaagtc
     4201 gaataccaga cggtatcgcc acgcgttgca caaccggtca tcgcacccgt attcgggcag
     4261 tgtagcgtta attcgcgacc atcgggtgtg atcacatcgg ctaaaaaacg tttgtaacgc
     4321 tgaattagcg tcgcgcgctg tagaagggga gagaattcca ttgcgacaat ccttgttatt
     4381 gcattagcgc ccagcgtttt agcggcgtgt agcgtgtgcg tccacgggca aacgaggagg
     4441 cgtaaagggt gaactccgtc accgcataag accagttaaa acctggcggc gggattgtca
     4501 ccgcctcgct ggcgtcgcgc aataaggtaa tatgtggatg aaacggacga ttgctttgaa
     4561 aacaaccgct gcgggcagcc tgtgaacgga gcatattcgc cagctggatt aagccgcgtg
     4621 gcggctgacg catccctaac cacaccacac gcgaacgcag ccattgtccg gcgtcatcaa
     4681 gcgtgagtgt gaaaccaggt tgacgaatcc gtccggctaa aagagaaagc gccttctctt
     4741 tctcggcgct cacttcgcct aaaaatgcca gagtcagatg caaattatcg gcggcgaccg
     4801 gacgtcccgc ctcaggtggg aagtgtgtgg cgcgccagtg gataatctgt tcgcggattt
     4861 ctgcaggtaa gtcgatagca aagaacagac gttgcggttc agacatgtga ggcactcggt
     4921 tatgaattac cgcgatgcta caatgtggcg cgaagaatgt taaccctctg gagcgttttg
     4981 tgtcgtcgtt gcccgttgct gccgttttac ctgaattact taccgctctc gattgtgcgc
     5041 cgcaggtatt attaagtgcg ccgaccgggg ccgggaaatc aacctggctg ccgctgcaac
     5101 tgctggcgca tcccggcatt aacgggaaaa ttatcctgct ggagccgcgt cgtctggcgg
     5161 cgcgtaacgt cgcgcaacgg ctggaggagc tgcttaacga aaagccaggc gataccgttg
     5221 gctaccggat gcgtgcgcaa aactgcgtcg ggccgaatac ccgcctggaa gtagttaccg
     5281 aaggcgtgct gacgcggatg atccagcgtg acccggagtt gagcggtgtt ggattggtga
     5341 tccttgatga atttcatgag cgtagcttgc aggcggattt ggcgttggcg ctgttactcg
     5401 atgtgcaaca aggtctgcgt gatgacctta aactgctaat tatgtcggct acgctggaca
     5461 acgaccgctt gcagcaaatg ctgccagaag cgcccgtcgt catctcagaa gggcgctcgt
     5521 ttccggttga acgccgttat ttaccgctgc ccgcgcatca gcgttttgac gatgccgttg
     5581 cggtagccac cgctgaaatg ctgcgtcagg aaagcggatc attactgtta tttttacctg
     5641 gcgtcggaga aattcagcgt gtgcaggaac aactggcttc gcgcatcggc agtgatgtat
     5701 tgctctgccc gctgtatggc gcgttgtcgc tgaacgatca gcgaaaagcg atcctcccgg
     5761 caccgcaagg gatgcgcaaa gtggtgctgg cgaccaatat tgctgaaacc agtttaacca
     5821 tcgaaggtat tcgtctggtg gtggattgtg cccaggagcg tgtggcgcgt tttgatccgc
     5881 gcacggggct aacgcgactg attactcaac gcgttagcca ggcatccatg acgcagcgtg
     5941 ccgggcgcgc cgggcgtctg gagccgggta tctgcctgca tctaatcgcc aaagaacaag
     6001 cagaacgcgc tgccgcgcaa agtgaaccgg aaatcttaca aagcgatctt tccggtttgc
     6061 tgatggaatt actgcaatgg ggatgcagcg atccggcgca gatgagctgg ctggatcaac
     6121 cgccaacggt gaatctactg gccgcgaaac gcctgttaca aatgctgggg gcgctggagg
     6181 gtgaacggct tagtgcgcag gggcaaaaaa tggcagcgct gggtaacgat ccgcgtttag
     6241 cggcaatgct ggttagcgcg aagaacgacg acgaagctgc taccgcggca aaaattgccg
     6301 ccattctcga agagccgcca cggatgggca atagtgacct gggcgtggcg ttttcgcgca
     6361 atcaaccagc ctggcagcaa cgtagtcagc aactgttaaa acgcttaaac gtacgtggcg
     6421 gtgaggcaga cagttcgctt atcgcgccgc tacttgccgg ggcgtttgcc gatcgcattg
     6481 ctcgtcgccg tgggcaagat ggacgctatc aactggcaaa cggcatggga gcgatgctcg
     6541 atgccgacga cgcgctaagc cgccacgaat ggttgatcgc accgttatta ttgcagggca
     6601 gcgcctcgcc ggatgcgcgg attttactgg cgctgccggt cgatattgat gagttagtac
     6661 aacgctgccc gcagctggta cagcagtctg acactgtgga gtgggatgac gcgcaaggta
     6721 cgctgaaagc ctggcgtcgg ctgcaaatcg gtctgctgac ggtgaaagtg cagccgctgg
     6781 cgaaaccctc ggaagacgag ttgcatcagg cgatgcttaa tggcatccgt gataaaggtt
     6841 taagcgtgct caactggacg gcggaagcgg aacagctacg cttgcgtttg ttatgcgccg
     6901 caaagtggtt gccggaatat gactggccag cggttgatga tgaaagttta ttggcgacgc
     6961 tggaaacgtg gctgctgcca catatgactg gcgtacattc actacgcggc ctgaaatcac
     7021 tcgacattta tcaggcacta cgcggattac ttgattgggg aatgcagcaa cgtctggata
     7081 gtgaattgcc tgcgcattac actgtgccga cgggaagccg gatcgccatt cgttatcatg
     7141 aagataaccc gcccgcgctg gcggtgagaa tgcaagagat gtttggcgag gccaccaatc
     7201 cgacgatcgc ccaggggcgc gtgccgctgg tgctggagtt gctttcacct gcccaaagtc
     7261 cattacaaat cacacgagat ttgagcgcct tctggaaagg agcgtaccgt gaggtgcaaa
     7321 aagagatgaa agggcgttat cccaaacatg tctggccgga cgacccggca aatactgcac
     7381 cgacgcgacg gacgaaaaag tattcgtaag gttggttttc tccctctccc tgtgggagag
     7441 ggccggggtg agggcatcag cgcgcacgtt caccctcacc ctaaccctct ccctcaaggg
     7501 agaggggacc gatcgaacac aaattttgag agatatcttc ttctgtcttg taacagaaga
     7561 acagaaaatc gggcttttgc gcctgaatat tgcggagaaa aagcatggcc gggaatgacc
     7621 gcgagccaat tggacgcaaa gggaaaccga cgcgtccggt caaacaaaag gtaagccgtc
     7681 gtcgttacga agatgacgat gattacgacg attatgatga ctatgaggat gaagaaccga
     7741 tgccgcgcaa aggtaagggc aaaggcaaag ggcgtaagcc tcgtggcaaa cgcggctggc
     7801 tatggctact gctaaaactg gctatcgttt ttgccgtgct gatcgccatt tacggcgttt
     7861 atctcgatca aaaaattcgt agccgtattg atggcaaggt ctggcaactg cctgcggcag
     7921 tttatggccg aatggtcaat cttgagccag atatgaccat cagcaagaac gagatggtga
     7981 agctgctgga ggcgactcag tatcgtcagg tgtcgaaaat gacccgtcct ggcgaattta
     8041 ccgtgcaggc caacagcatt gagatgatcc gccgtccgtt tgatttcccg gacagtaaag
     8101 aagggcaggt gcgtgcgcat ctgacctttg atggtgatca tctggcgacc atcgtcaata
     8161 tggagaacaa ccgtcagttc ggctttttcc gtcttgatcc gcgtctgatc accatgatct
     8221 cctcgccaaa cggtgagcaa cgtctgtttg tgccgcgcag tggtttccct gatttgctgg
     8281 tggatacttt gctggcgaca gaagaccgcc atttctacga gcatgatggg atcagcctct
     8341 actcaattgg gcgtgcggtg ctggcaaacc tgaccgcagg tcgcacggtg cagggtgcga
     8401 gtacgctgac gcaacagctg gtgaaaaacc tgttcctctc cagcgagcgc tcttactggc
     8461 gtaaagcgaa cgaagcctac atggcgctga tcatggacgc gcgttacagc aaagaccgta
     8521 ttcttgagct gtatatgaac gaggtgtatc tcggtcagag cggcgacaac gaaatccgcg
     8581 gcttcccgct ggcaagcttg tattactttg gtcgcccggt agaagagcta agcctcgacc
     8641 agcaggcgct gttagtcggt atggtgaaag gggcgtccat ctacaacccg tggcgtaacc
     8701 cgaaactggc gctggagcga cgtaatctgg tgctgcgtct gctgcaacag caacagatta
     8761 ttgatcaaga actctatgac atgttgagtg cccgtccgct gggggttcag ccgcgcggtg
     8821 gggtgatctc tcctcagcca gcctttatgc aactggtgcg tcaggagctg caggcaaaac
     8881 tgggcgataa ggtaaaagat ctctccggcg tgaagatctt cactaccttt gactcggtgg
     8941 cccaggacgc ggcagaaaaa gccgccgtgg aaggcattcc ggcactgaag aaacagcgta
     9001 agttgagcga tcttgaaact gcgattgtgg tcgtcgaccg ctttagtggt gaagttcgtg
     9061 cgatggtggg aggttctgag ccgcagtttg cgggctacaa ccgtgcgatg caggcgcgtc
     9121 gttcgattgg ttcccttgca aaaccagcga cttatctgac ggctttaagc cagccgaaaa
     9181 tctatcgcct gaacacgtgg attgccgatg cgccaatcgc gctgcgtcag ccgaatggcc
     9241 tggtctggtc accgcagaac gatgaccgtc gttatagcga aagcggcaga gtgatgctgg
     9301 tggatgcgtt gacccgttcg atgaacgtgc cgacggtaaa tctggggatg gcgctggggc
     9361 tgcctgcagt tacggatacc tggatcaaac tgggcgtacc gaaagatcag ctgcatccgg
     9421 ttccggcgat gctgctgggg gcgttgaact taacgccaat cgaagtggcg caggcgttcc
     9481 agaccatcgc cagcggtggt aaccgtgcac cgctttctgc actgcgttcg gtaatcgcgg
     9541 aagatggcaa ggtgctgtat cagagcttcc cgcaggcaga acgcgctgtt ccggcgcagg
     9601 cggcgtatct gacactatgg accatgcagc aggtggtaca acgtggtacg ggtcgtcagc
     9661 ttggggcgaa atacccgaac ctgcatctgg cagggaaaac agggactacc aacaataacg
     9721 tagatacttg gtttgcaggc attgacggca gcacggtgac catcacctgg gcaggccgtg
     9781 ataacaacca gccgaccaaa ctgtatggag ccagcggggc aatgtcgatt tatcagcgtt
     9841 atctggctaa ccagacgcca acgccgctga atcttgttcc gccagaagat attgcagata
     9901 tgggcgtgga ctacgacggc aactttgttt gcagcggtgg catgcgtgtc ttgccggtct
     9961 ggaccagcga tccgcaatcg ctgtgccagc agagcgagat gcagcagcag ccgtcaggca
    10021 atccgtttga tcagtcttct cagccgcaac agcaacctgc tcagcaagag cagaaagaca
    10081 gcgacggtgt agccggttgg atcaaggata tgtttggtag taattaacat ctaagcgtga
    10141 aataccggat ggcgagttgc catccggtaa aataacatcc catctaagat attaaccctt
    10201 tcttttcatc tggttgttta ttaacccttc aggaacgctc agattgcgta ccgcttgcga
    10261 acccgccagc gtttcgaata ttatcttatc tttataataa tcattctcgt ttacgttatc
    10321 attcacttta catcagagat ataccaatgg cgcgttccaa aactgctcag ccaaaacact
    10381 cactgcgtaa aatcgcagtt gtagtagcca cagcggttag cggcatgtct gtttatgcac
    10441 aggcagcggt tgaaccgaaa gaagacacta tcaccgttac cgctgcacct gcgccgcaag
    10501 aaagcgcatg ggggcctgct gcaactattg cggcgaagca ctctgctact gcgactaaaa
    10561 cggatacacc aattgaaaaa acgccgcagt ctatttcggt tgtgacaaat gaagagatgc
    10621 agatgcatca atttcagtct gtaaaagaag cattaggtta tacacctggc gttacggtta
    10681 gcagtcgtgg tgcttctaat acatatgatt ttgttatcat tcgtggtttc tcatctgttg
    10741 gtctgaatca aaataattac cttgatggac taaaacttca gggcaacttt tataacgatg
    10801 ctgtgattga tccttacatg ctcgagaggg ttgaactgat gcgtgggccg acgtctgttc
    10861 tctatggaaa aagtaatcct ggtgggatta tttctatggt gagtaagcgt ccgaccactg
    10921 aacccctgaa agaaattcag tttaaaatgg ggacggataa tctgtttcag accggattcg
    10981 atttcagtga tgcactggat gataacggtg agttctctta ccgtttgacg ggcctcgctc
    11041 gctcaacaaa cgaacagcag aaaaactctg aatctcagcg ttataccatt gctccatcat
    11101 tctcatggcg tccagacgac aaaaccaatt ttactttcct gtcctatttc cagaatgaac
    11161 cagaaacggg ttattacggt tggttgccga aagaggggac cgttgagcca ttgcctaatg
    11221 gtaagcgtct accgactgac ttcaatgaag gtgcatcgaa taatacatac tcccgtaacc
    11281 agaaaatggt gggatatagt tttgaacatg gttttaatga caccttcacc gtgcgtcaga
    11341 atctgcgttt cagtgaaatg aaaacctcac agaaaagtgt ttatggcaca gggattgctg
    11401 gtgatggtca taccctaaac cgcgggacag tggtggataa tgagcgtcta caaaacttta
    11461 gcgttgatac ccaacttgaa agtaagtttg ctacaggtga cgtcgagcat actttgctga
    11521 caggggtaga cttcatgcgg atgcgtaatg atatcaatgc cagctttgga tccgcaccat
    11581 ccatcgatct ttataacaaa tatcaccctg aatactttgc atttggtagc gcagagccat
    11641 accagatgaa tgaaagcaaa caaacaggta tttatgttca ggatcaggcg gaatggaata
    11701 aatgggtatt cactctgggg ggacgctacg attggtctaa gcaagcgacc actgttcgtg
    11761 aaaactctta tacgccgact gaaggttata ttgagcgcaa tgatcatcag ttcacctggc
    11821 gcggtggtgt aaattactta ttcgataatg gtatttcacc ttactttagc tatagccagt
    11881 cctttgaacc gagtgctttc gatctgtgga gcaacccacg catttcctat aagccatcga
    11941 aaggtgaaca gtatgaagct ggcgtaaaat atgttccgaa tgatatgccg gtcgttgtta
    12001 cgggcgcagt ctatcaattg acgaaaacaa ataacctgac agcagaccca acaaacccat
    12061 tagcgcaagt cccagcaggt gagattcgcg ctcgtggtgt ggaacttgaa gcaaaagcgg
    12121 cgttaaatgc caatattaac ttgacggctt cttataccta caccgatgcg gaatacacca
    12181 aagacaccaa tctcaaaggt aaaactccag aacaagtacc ggagcatatg gcatctctct
    12241 ggggggatta taccttcaat gaagggccgc tttctggttt aacattggga acaggtggtc
    12301 gttttattgg ttccagctat ggtgatccgg caaacacttt taaagtgggt agcgcagctg
    12361 taatggatgc tgttgtaaaa tatgatctgg cacgctttgg tatggcggga tccagccttg
    12421 ctgtgaacgt caacaatttg ctcgatcgtg agtatgttgc cagttgcttc cagacttatg
    12481 gctgcttctg gggcgcagaa cgtcaggtcg ttgcaaccgc aaccttccgt ttctaatttc
    12541 tcttttgggg cacggatttc cgtgcccatt tcacaagttg gctgttatgc aggaatacac
    12601 gaatcattcc gataccactt ttgcactgcg taatatctcc tttcgtgtgc ccgggcgcac
    12661 gcttttgcat ccgctgtcgt taacctttcc tgccgggaaa gtgaccggtc tgattggtca
    12721 caacggttct agtaaatcca ctctgctcaa aatgcttggc cgtcatcagc ctccgtcaga
    12781 aggggagatt cttcttgatg cccagccgct ggaaagctgg agcagcaaag cgtttgcccg
    12841 caaagtggct tatttgccgc agcagcttcc tccggcagaa gggatgaccg tgcgtgaact
    12901 ggtggcgatt ggtcgttacc cgtggcatgg cgcgctgggg cgctttgggg cggcagatcg
    12961 cgaaaaagtc gaggaagcta tctcgctggt tggcttaaaa ccgctggcgc atcggctggt
    13021 tgatagtctc tctggcggcg aacgtcagcg ggcgtggatc gccatgctgg tggcgcagga
    13081 tagccgttgt ctgttgctcg acgaaccgac ctcggcgctg gatatcgccc accaggttga
    13141 tgtgctggcg ctggtgcacc gtttaagtca ggagcgtggc ctgacggtca ttgccgtgtt
    13201 gcacgatatc aatatggcgg cacgctactg tgattatctg gtcgccctgc gcggtggtga
    13261 aatgattgct cagggaacgc ctgcggaaat tatgcgcggc gataccctcg aaatgattta
    13321 tggcatcccg atgggtattt tgccgcatcc ggcgggtgct gcacctgtga gttttgttta
    13381 ttgatgagcg gcttacctct tatttcgcgc cgtcgactgt taacggcgat ggcgctttct
    13441 ccgttgttat ggcagatgaa taccgcccac gcggcggcta ttgatcccaa tcgtattgtg
    13501 gcgctggagt ggttgccggt ggaattactg ctggcgctcg gcatcgtgcc ttacggcgta
    13561 gcggatacca tcaactatcg cctgtgggtc agcgaaccac cattgccgga ctcagtgatc
    13621 gacgtcggtt tgcgcacaga acctaacctt gaactgctga ccgaaatgaa accgtcgttt
    13681 atggtctggt cggcaggata tggcccttca gcagaaatgc tggcacgtat tgcgccgggg
    13741 cgtggattta acttcagcga cggcaaacag ccgctggcga tggcgcgtaa atcactgacg
    13801 gaaatggcag atttacttaa cctgcaaagc gcagcagaaa cgcatttagc gcaatatgaa
    13861 gactttatcc gcagcatgaa accccgcttt gtgaagcgtg gtgcacgccc gttattgctg
    13921 acgacgctta tcgatccgcg ccatatgttg gtcttcggtc caaacagctt gttccaggaa
    13981 attcttgatg agtacggcat cccaaatgcc tggcaagggg aaaccaactt ctggggcagt
    14041 accgccgtca gtatcgatcg tctggcagcg tataaagacg ttgatgtgct ctgttttgat
    14101 cacgacaaca gcaaagacat ggatgcgcta atggcaaccc cgctgtggca ggccatgccg
    14161 tttgtccgcg ccggacgctt tcagcgcgta cccgcagtct ggttttatgg tgcgacgctc
    14221 tcggcaatgc actttgtgcg cgttctggat aacgccatcg gaggtaaagc gtgagtaaac
    14281 gaattgcgct tttcccggcg ttattgctgg cgctgctggt gattgtcgct acggcgctga
    14341 cctggatgaa cttttcgcag gcgctgccgc gtagccagtg ggcgcaggcc gcctggtcgc
    14401 cggatattga cgtcatcgag cagatgattt ttcactacag cttgctgccg cgtctggcga
    14461 tttcgctgct ggtgggcgca ggcctggggc tggtgggcgt gctgtttcag caagtgctgc
    14521 gtaatccgct ggcggaaccg acgacacttg gcgttgctac aggcgcgcaa ctggggatta
    14581 ccgtcactac gctctgggcg atcccagggg cgatggcgag tcagtttgct gcgctggcgg
    14641 gcgcttgcgt tgttggctta atcgtctttg gcgtcgcgtg ggggaaacgg ctttcgccgg
    14701 taacgctgat cctcgcgggg ctggtagtga gcctttattg tggggcaatc aatcagttac
    14761 tggttatctt ccaccatgac caactgcaaa gcatgttcct gtggagcacc ggaacgctga
    14821 cgcaaaccga ctggggcggt gttgagcgtt tatggccgca gttgctgggc ggtgtgatgc
    14881 tgacgttgct gctacttcgc ccgttaaccc tgatggggct tgatgatggc gtggcgcgca
    14941 atctcgggct ggccttgtcg ctcgcgcgtc tggcggcgct gtcgctggcg attgtcatca
    15001 gtgcgctgct ggtgaacgcg gtggggatta tcggctttat cgggttgttt gcgccgttgc
    15061 tggcaaaaat gctgggggcg cggcgtctgc tgccgcgact gatgctggcg tcgttgattg
    15121 gtgcgctgat cctctggctt tccgatcaaa tcatcctctg gctgactcgc gtgtggatgg
    15181 aagtgtccac cggttcggtc actgcgttga tcggtgcgcc gctgctactg tggctgttgc
    15241 cgcgtttacg cagcattagc gcgccggata tgaaggtcaa cgatcgtgtc gcggctgaac
    15301 gccaacatgt gctggcgttt gccctcgcgg gcggcgtgct gctgttgatg gctgtggtgg
    15361 tggcgctgtc gtttggtcgt gatgcgcacg gctggatgtg ggcgagcggg gcgttgctcg
    15421 atgatttaat gccctggcgc tggccgcgaa ttatggcggc gctatttgcg ggcgtcatgc
    15481 tggcggtggc gggctgtatt attcagcgac tgaccggcaa cccgatggca agcccggaag
    15541 tgctggggat tagctccggc gcagcgtttg gcgtggtact gatgctgttt ctggtaccgg
    15601 gtaatgcttt tggctggctg ttacccgcgg gaagtatcgg tgccgcggtg acgctgttga
    15661 ttattatgat cgccgccggg cgcggtggat tttccccaca ccgcatgtta ctggcgggga
    15721 tggcgttaag taccgcattc accatgcttt taatgatgtt gcaggcgagt ggtgacccgc
    15781 gaatggcgca agtgctcacc tggatctctg gttcgaccta caacgccacc gatgcgcagg
    15841 tctggcgtac cggaattgtg atggtgattt tgctggcgat taccccgctg taccgccgct
    15901 ggctgaccat tttacctctg ggcggtgata ccgcacgagc tgtgggaatg gcgctgacgc
    15961 cgacgcgaat tgcgctgctg ctgttagcgg cttgcctgac ggcgacctcg acgatgacta
    16021 ttggaccgtt gagttttgtt ggtttaatgg caccgcatat tgcgcggatg atgggttttc
    16081 gacggacgat gccacacatc gtaatttcgg cgctggtggg tggtttactg ctggtattcg
    16141 ctgactggtg tgggcggatg gtgctgtttc cattccagat cccggcgggg ctgctgtcga
    16201 cctttatcgg cgcgccatat tttatctatt tgttgagaaa gcagagccgt taattgagtg
    16261 cctcgcccgg tgggcgaggc aaaattatca caacttcgca aatacccgac gtgcagcatc
    16321 gatggtgtta ttgatatctt ccatgctgtg cgccacagac ataaagcccg cttcaaacgc
    16381 tgacggtgcc aggtaaacac cttcgtccag catcatatgg aagaaacgct taaagcgttc
    16441 cacgtcacag gccatcacat cctgatagca cgtcacggac tcggcgtcgg taaagaaaat
    16501 accgaacatg ccgccaacgt ggttaacgac cagcggagtt ccggcttctt ctgccgcttc
    16561 cagcagacct tctgccagac gtgttgtcag ctcatccagc gtttcgtgaa cgcccggctg
    16621 cgcgacttca ttcagacagg cgaaacccgc tgccatcgca atcgggttac cggaaagcgt
    16681 acccgcctga tagaccggac ccgtcggggc cagcgcatcc attacatcac gacgaccacc
    16741 gaatgcgcct accggcattc caccgccgat gattttgccg aggcaggtta aatctggcac
    16801 tacgccgtaa taatcctgtg cgccagccag tgccacgcgg aagccggtca tcacttcatc
    16861 gatgatcagc aacgcgccaa attcgtcgca cagcgcacgc agacctggca ggaactctgg
    16921 ctgcggcgga acacagttca tattgcctgc caccggctcg acgataatac aggcaatctc
    16981 ttgcgggtat tgctcaaacg cggcgcgtac agaagccaga tcgttataag tacaggttaa
    17041 ggtatgtttg gcgaaatctg ccggaacacc cggcgagttt ggctggccta acgtgagtgc
    17101 gccagaaccg gctttcacca gcaggcagtc agcgtgaccg tggtaacaac cttcaaattt
    17161 aatgattttg tcgcgaccgg taaaaccacg ggccaggcgg atggcgctca tggtcgcttc
    17221 agtgccggag ttcaccatgc gcaccatatc catggtcggg accagttcgg tcaccagttg
    17281 cgccattttc acttccattt cggtcggtgc accaaagctt aaaccacgct cggcggcttc
    17341 aatcacggca ttgcggatag ccggatggtt atggcccagc accatcggcc cccaggaacc
    17401 gacataatcg atataggctt tgccatcaac atcgtacaga taagcgccgt ccgctttttc
    17461 gataaacagt ggagtgccgc ccacgccagt aaaggcgcga acaggggagt tcacaccgcc
    17521 agggagcagc tcgcgcgctg cgctgtaaag attttcagac ttactcatgg agggttcctg
    17581 attcgtagaa aaagtgaatg gctgctattc tatgttattc ataacaagtt aaatactcgt
    17641 caaacatcag gctgcttgta ctggtgcaat cctgatttct tagagtataa aagttttgtg
    17701 catttgaaac attacgcttt gcaaaggatt ttcatggaac gtgcgagtaa aatgccgtca
    17761 tcttatttgt atgaccaata agtgatcatt ggatgaaaac tgatactccc tctttagaaa
    17821 caccgcaggc cgcgcgcctg cgacgcagac aactgattcg ccaacttctt gagcgcgata
    17881 aaaccccgtt agccattttg tttatggcgg cagtcgtcgg cacgcttgtc gggctggcag
    17941 cggttgcttt tgacaaaggt gtcgcctggt tgcagaacca acgtatgggg gcgctggtac
    18001 atactgctga taattatccg cttctgttaa ccgtcgcttt tctctgttcg gcggtgctgg
    18061 cgatgttcgg ctactttttg gtgcgcaaat acgcgccgga agcaggtggt tcggggatcc
    18121 cggaaattga aggggcgctg gaagatcaac gtcccgttcg ctggtggcgt gtgttgccgg
    18181 tgaaattctt tggcgggctg gggacactcg gcggaggcat ggtgctgggg cgcgaagggc
    18241 caaccgtgca gatcggcggc aatatcggtc gcatggtact cgatattttc cgcctgaaag
    18301 gtgatgaagc tcgccatacg ctgctggcaa ccggtgctgc tgcggggctg gctgcggcct
    18361 ttaacgcgcc gctggcgggt attttgttta ttatcgaaga gatgcgtccg cagtttcgct
    18421 atacgttaat ttcgattaaa gcggtattta ttggcgtcat tatgtcgacc attatgtacc
    18481 ggatttttaa tcatgaagtt gcgttgattg acgtcggtaa actttctgat gcgccgctta
    18541 atacgctgtg gctttatctg atcctcggta ttatttttgg cattttcggc cctattttta
    18601 ataaatgggt gctggggatg caggatttgc tgcaccgtgt gcacggcggc aatattacca
    18661 aatgggtgct aatgggcggt gcgattggcg gtctgtgtgg attgctgggg tttgtggcac
    18721 cagcaacgtc gggcggcggt tttaacctga ttcctatcgc taccgcaggg aatttcagca
    18781 tgggaatgct ggtgtttatc ttcgtcgcgc gggtcattac caccttactg tgcttctctt
    18841 ccggcgcgcc gggcggtatt tttgccccga tgctggcgct gggtactgtg ctgggaaccg
    18901 ctttcggaat ggttgtcgtt gagctgtttc cgcaatatca ccttgaggcg gggacttttg
    18961 ctattgccgg aatgggggcg ttactggcgg catctattcg cgcgccgtta acggggatca
    19021 ttttggttct ggagatgacc gataactacc agctcatttt gccaatgatt attaccggtc
    19081 ttggcgcaac actattagcg caatttaccg gcgggaaacc gctatattcg gagattcttg
    19141 cgcgcacgct ggcaaaacag gaagctgagc aactggcgcg aagcaaggcc gcatcagcca
    19201 gcgagaatac ttgaacgaaa taccagggta ttagataatg gcgattatta ttgggttaga
    19261 atttgcccaa ttgccgatgt cgtttggagc aaaatatgag tgatgacgta gcactgccgc
    19321 tggagtttac cgacgcagca gccaacaaag ttaaaagcct gatcgctgac gaagataacc
    19381 cgaatctgaa attacgcgtg tatatcaccg gtggcggttg cagcggcttc cagtatggtt
    19441 tcacctttga tgatcaggtg aacgaaggcg atatgaccat cgaaaaacag ggcgttggcc
    19501 tggtggttga tccgatgagc ctgcaatatc tggtcggtgg ttccgttgac tataccgaag
    19561 gactggaagg ttctcgtttc atcgtgacca acccgaacgc gaaaagcacc tgcggttgcg
    19621 gttcttcctt tagcatctaa tctgttgttc atgtgccgga taaactatcc ggcacatctt
    19681 ctctcttcaa cgcccattct catccagcgc aaacgtcggt agcttaagat gccaacgaat
    19741 agccgccagc cgaatcaata gcgtcacgac catgcccatc atactggctg tttccagtgg
    19801 tacggaaaat gtgtaataag ccgtagcgtg gacaataccg ccgataatac aggcagttgc
    19861 gtagatttct gtacgtaaaa tcatggggat ttcgcgggcc agtacatcac gaatgatccc
    19921 gccgccaacg ccagtaatga cgcccataca aaccgcgatt aacggaccgg cttccgcatt
    19981 aaaggcttta ttcacgccaa tgccgacaaa caccgccaga ccaacggcgt ccagcaccgg
    20041 caacatccat tttggtaagc gtcttggctg gcgcaccagc acgatggtca gcatgctggt
    20101 taccattgca acgaccagat cggtgggatc tttcacccaa aataccgggc cgtgatccag
    20161 cgccatgtcg cgaattgtcc cgccgcctac agcggtaacc acgcccagta ccagaacacc
    20221 aaaagggtcc atacgcaatt ttccggctaa caaaacgccg gagatggcaa ataccgctgt
    20281 gccgactata tccagccaat agacgagcat tgttcaatcc ccactgagca cctaaaaagg
    20341 tcaggcgcta atctacctgt gaaagcgcat tacagagctg ttgtgcagcg aggataatac
    20401 gtgggcttgc acgtcaaacc agtcactcgt gagaggaata acgggaattt tgagctgttc
    20461 accccagtat tgtttgattt taggaatttg gtccggtccg cctgtaatga caatcgcctg
    20521 tggcgagcgt gctaacacct gttcgcggct aacttgcggc caaggaaccc ggctgtcttt
    20581 aaagatgttt tctccgccac aaacttcgag tacctggttt tgaatcgact cttttccact
    20641 ggtaaatggc ggattaatgc cgaattgcag aaaaacacgt tttttaggtt tatcagcata
    20701 ttgcgctttc aattgcgcgt actgatccag cagggattgc gcggcttgtt cggccttatc
    20761 cggttgcgga ctccaggggg ccagttgacg taacgcattg gcaatttgtt caatgcttgt
    20821 cgcatcgacc cacatcactt ttattcccgg cgaagccagc tggtcaacct gccgctcggc
    20881 attacctcca cgccaggcaa tcaccagatc gggtttcagc gcgacaatgc gttccagatt
    20941 catcccctgc caggtggaaa cctgctcaat cttttgcgct tgtggaggat agtcggaata
    21001 gctgctgacc ccaaccggcg tgatcccggc ggcaaaggca agttcagtgt tggcgggaga
    21061 aagcgtgatg acgcgcggtg ccgcgttgag ccacagtggc gcgagaaaag acagggcgac
    21121 cagcgccctg aacagtgact tagccatgtg ccagtttctg caccagtgac tcaaccatca
    21181 ggctggactg tttagcggca acagccagga actcatcgaa gctaagatga gactgttgat
    21241 cggccacgtc ggagatggcg cgtacgacaa caaacgggac gttgaaattg tggcagacat
    21301 gggcgattgc cgtcgcttcc atctctacag caatggcctg tgggaagttg tggcggattt
    21361 tcgccagacc aacagaaccg ttgatgaaag cgtcgccgct aacaatcagg ccacgtacag
    21421 cgttaagatt cagttcggca atgcaggcct cagcggcagc gatcagttta tcgtcagctt
    21481 caaagcctgc cggacagcct ggtaactgac cgtattcata accaaatgcc gtgacatccg
    21541 cgtcgtgata acgtgcttcg tccgagacaa cgatatcgcc cactttcaac gttggtgcca
    21601 ggccaccggc agaaccggtg ttaataatca catctggctt gcagtgttcc aacagcaaag
    21661 tggcacccag cgccgcagcg actttaccga tgcccgattt cagaagcgca acctcggttc
    21721 cattcagttg gccggtatag atttcgcaac cgccgagact gatagtttga cgattttcga
    21781 ttttgtcacg cagcagcgta acttcttctt ccattgcacc aatgatgccg attttcatag
    21841 atttactcgc gataagcccg atttgaaggc atagtttacc atgcgcttac ggggaagcgt
    21901 atttctcacg cgggagagga catggcacag attgatttcc gaaaaaaaat aaactggcat
    21961 cgtcgttacc gttcaccgca gggcgttaaa accgaacatg agatcctgcg gatcttcgag
    22021 agcgatcgcg ggcgtatcat caactctccg gcaattcgtc gtctgcaaca aaagacccag
    22081 gtttttccac tggagcgcaa tgccgccgtg cgcacgcgtc ttacccactc gatggaagtc
    22141 cagcaggtgg ggcgctacat cgccaaagaa attctaagcc gtatgaaaga gcttaaatta
    22201 ctggaagcat acggcctgga tgaactgacc ggcccctttg aaagcattgt tgagatgtca
    22261 tgcctgatgc acgatatcgg caatccgccg tttggtcatt ttggcgaagc ggcgataaat
    22321 gattggtttc gccagcgttt gcacccggaa gatgccgaaa gccagcctct gactgacgat
    22381 cgctgcagcg tggcggcact acgtttacgg gacggggaag aaccgcttaa cgagctgcgg
    22441 cgcaagattc gtcaggactt atgtcatttt gaggggaatg cacaaggcat tcgtctggtg
    22501 catacattga tgaggatgaa tctcacctgg gcacaggttg gcggtatttt aaaatatacc
    22561 cgtccggcgt ggtggcgtgg cgaaacgcct gagacacatc actatttaat gaaaaagccg
    22621 ggttattatc tttctgaaga agcctatatt gcccggttgc gtaaagaact taatttggcg
    22681 ctttacagtc gttttccatt aacgtggatt atggaagcag ccgacgacat ctcctattgt
    22741 gtggcagacc ttgaagatgc ggtagagaaa agaatattta ccgttgagca gctttatcat
    22801 catttgcacg aagcgtgggg ccagcatgag aaaggttcgc tcttttcgct ggtggttgaa
    22861 aatgcctggg aaaaatcacg ctcaaatagt ttaagccgca gtacggaaga tcagtttttt
    22921 atgtatttac gggtaaacac cctaaataaa ctggtaccct atgcggcaca acgatttatt
    22981 gataatctgc ctgcgatttt cgccggaacg tttaatcatg cattattgga agatgccagc
    23041 gaatgcagcg atcttcttaa gctatataaa aatgtcgctg taaaacatgt gtttagccat
    23101 ccagatgtcg agcagcttga attgcagggc tatcgggtca ttagcggatt attagagatt
    23161 tatcgtcctt tattaagcct gtcgttatcc gactttactg aactggtaga aaaagaacgg
    23221 gtgaaacgtt tccctattga atcgcgctta ttccacaaac tctcgacgcg ccatcggctg
    23281 gcctatgtcg aggctgtcag taaattaccg tcagattctc ctgagtttcc gctatgggaa
    23341 tattattacc gttgccgcct gctgcaggat tatatcagcg gtatgaccga cctctatgcg
    23401 tgggatgaat accgacgtct gatggccgta gaacaataac caggcttttg taaagacgaa
    23461 caataaattt ttaccttttg cagaaacttt agttcggaac ttcgcgctat aaaacgaatc
    23521 tgaagaacac agcaattttg cgttatctgt taatcgagac tgaaatacat gaaaaaaacc
    23581 acattagcac tgagtgcact ggctctgagt ttaggtttgg cgttatctcc gctctctgca
    23641 acggcggctg agacttcttc agcaacgaca gcccagcaga tgccaagcct tgcaccgatg
    23701 ctcgaaaagg tgatgccttc agtggtcagc attaacgtag aaggtagcac aaccgttaat
    23761 acgccgcgta tgccgcgtaa tttccagcag ttcttcggtg atgattctcc gttctgccag
    23821 gaaggttctc cgttccagag ctctccgttc tgccagggtg gccagggcgg taatggtggc
    23881 ggccagcaac agaaattcat ggcgctgggt tccggcgtca tcattgatgc cgataaaggc
    23941 tatgtcgtca ccaacaacca cgttgttgat aacgcgacgg tgattaaagt ccagctgagc
    24001 gatggccgta agttcgacgc gaagatggtc ggcaaagatc cgcgctctga tatcgcgctg
    24061 atccaaatcc agaacccgaa aaacctgacc gcaattaaga tggcggattc tgatgcactg
    24121 cgcgtgggtg attacaccgt agcgattggt aacccgtttg gtctgggcga gacggtaact
    24181 tccgggattg tctctgcgct ggggcgtagc ggcctgaatg ctgaaaacta cgaaaacttc
    24241 atccagaccg atgcagcgat caaccgtggt aactccggtg gtgcgctggt taacctgaac
    24301 ggcgaactga tcggtatcaa caccgcgatc ctcgcaccgg acggcggcaa catcggtatc
    24361 ggttttgcaa tcccgagcaa catggtgaaa aacctgacct cgcagatggt ggaatacggc
    24421 caggtgaaac gcggtgagct gggtattatg gggactgagc tgaactccga actggcgaaa
    24481 gcgatgaaag ttgacgccca gcgcggtgct ttcgtaagcc aggttctgcc taattcctcc
    24541 gctgcaaaag cgggcattaa agcgggtgat gtgatcacct cactgaacgg taagccgatc
    24601 agcagctttg ccgcactgcg tgctcaggtg ggtactatgc cggtgggcag caaactgacc
    24661 ctgggcttac tgcgcgacgg taagcaggtt aacgtgaacc tggaactgca gcagagcagc
    24721 cagaatcagg ttgattccag ctccatcttc aacggcattg aaggcgctga gatgagcaac
    24781 aaaggcaaag atcagggcgt ggtagtgaac aacgtgaaaa cgggcactcc ggctgcgcag
    24841 atcggcctga agaaaggtga tgtgattatt ggcgcgaacc agcaggcagt gaaaaacatc
    24901 gctgaactgc gtaaagttct cgacagcaaa ccgtctgtgc tggcactgaa cattcagcgc
    24961 ggcgacagca ccatctacct gttaatgcag taatctcact caaccccttc ctgaaaacgg
    25021 gaaggggttc tccttacaat ctgtgaactt caccacaact ccatacatct tcatcatcct
    25081 ttaggcattt gcacaatgcc gtacgttacg tacttcctta tgctaagccg tgcataacgg
    25141 aggacttatg gctggctggc atcttgatac caaaatggcg caggatatcg tggcacgtac
    25201 catgcgcatc atcgatacca atatcaacgt aatggatgcc cgtgggcgaa ttatcggcag
    25261 cggcgatcgt gagcgtattg gtgaattgca cgaaggtgca ttgctggtac tttcacaggg
    25321 acgagtcgtc gatatcgatg acgcggtggc acgtcatctg cacggtgtgc ggcaagggat
    25381 taatctaccg ttacggctgg aaggtgaaat tgtcggcgta attggcctga caggtgaacc
    25441 agagaatctg cgtaaatatg gcgaactggt ctgcatgacg gctgaaatga tgctggaaca
    25501 gtcgcggttg atgcacttgt tggcgcagga tagccgtttg cgggaggaac tggtgatgaa
    25561 cctgattcag gcagaggaga atactcccgc acttactgaa tgggcgcaac ggctggggat
    25621 cgatctcaat caaccgcgag tggtggctat tgttgaggtc gacagcggtc agcttggtgt
    25681 ggacagcgca atggcggagt tacaacaact gcaaaacgcg ctgactacgc ccgagcgtaa
    25741 taatctggtg gcgattgtct cgctaaccga aatggtggtg ttgaaaccgg cgttgaactc
    25801 ttttgggcgc tgggatgcag aagatcatcg taagcgagtt gaacaactga ttacccgcat
    25861 gaaagagtac ggccggctgc gttttcgcgt ttcactgggc aactatttta ccggtcctgg
    25921 cagtattgcc cgatcctatc gtacggcgaa aacgacgatg gtggtgggta aacagcggat
    25981 gccagaaagt cgctgctatt tttatcagga tctgatgtta cctgtgttac tcgacagttt
    26041 gcgtggcgac tggcaggcca acgaactggc gcgaccgctg gcgcggctga aagcgatgga
    26101 caataacggc ttgctgcgac gaacgctggc ggcgtggttt cgtcacaatg tgcaaccgct
    26161 ggcaacgtca aaggcgttgt ttatttatcg taataccctg gagtatcggc ttaatcgtat
    26221 atcggaactg accgggcttg atttgggcaa ttttgatgac aggttgctgc tgtatgtggc
    26281 gttacaactg gatgaagagc ggtaggttat gcgttaaggt tgaggcggcg ctgtctcatt
    26341 cccctcagcc cgaaggggag aggggaatgc ccgaattaac cgtcaattcg ggattattta
    26401 cgcgttagtt tttccagatc ggcttcaatc tcgctgatct tattggttac gactgactcc
    26461 aggtgacgta agtcgtcgag gatcttacgc ttaagatcaa cttcgctgcg gtcacgctgg
    26521 cagatttgat caagctcatc aatgatatac cgtagattcg ggctgatttc ctggacttct
    26581 ttataaccct gacccacacc atcagcgacg accgttttac gctgacgcgg atatttaaac
    26641 ttaacgctct tggcgaaaaa ctcgcctttg tctttctgga aatagatttt cagaatatcg
    26701 ttgttggctt cctgccggag gctgtaacga tcaatttctt caggattggt aatacccaga
    26761 cttttcagat tgtcgtacat agcgttacct caaaatgagt cagtaaattg tgcttatttt
    26821 agcatttggc ctagcccgcc cggctcgact gtgatcgcag aaagcctttt tcttccagac
    26881 ttctatcatg gcgtaaaaat caaaaaatta cctgctttat tgtggtgata aaattcacgt
    26941 tctacaccag ttccagcatc gttacttccg ggcggcagtt cagacgcaaa ccatacaaac
    27001 tgcccacgcc acgggttgtg tagatgtgtc gttcgccaaa ggcatttaat ccggcgacgt
    27061 aacgtttatc ttcgacaggg gcaaaaggtt caccaaccaa cggtacgcgc agttgcccgc
    27121 cgtgagtatg gccgcacagc atcagatccc agggttcatc acgcatgact tctttgctgt
    27181 cgggattatg tgccagcatc agtcttggca gatttgcttc gctggcggga ggtggtttgc
    27241 attgtccggc ccataagtca ccggtgccta ccagttcgaa ttgcctgttc ggcgtggcga
    27301 tcaccgtagc ctggttaaac aacaccgtga tgcccactga tttcaacgtc tcgccaatta
    27361 agtgattttt ttctgtacca acagggcgat cgtggttgcc gaagcaggca aacgtcggcg
    27421 cacattcggc aaggggggag aggacatcac taaacgccga aaaattcagc ggcatatcaa
    27481 ataatacgta atcgccgccc agtaatatca aatcgggctt ttgttctatg ccaagagcaa
    27541 tcgcgtcaga aatcaggctt aaaggaacaa aacgagagta atggagatcg gccagaaaaa
    27601 gaattttgaa tggtgctgcg ttgtctttaa aaaaggcgag gcggtgacgg attaattcaa
    27661 accagcctgg ctcccagtaa tgcatataac cgaaacctga gctcgtggct atcgtcgcgg
    27721 cagtagcctg caacaatcgg cggcgtgaaa tcatcgctca tccctgcaaa aaaaatcggg
    27781 cagcgtcgtg ctgcccgtgt gcatactttt agtcgatggt acgcagcagt tcgttaatgc
    27841 cgactttgcc gcgagttttc gcgtcaactt tcttaacgat aaccgcacag tagaggctgt
    27901 atttgccatc ttttgacggc agattacctg aaacaaccac agaccccgcc ggaacgtgac
    27961 cgtagtggat ttcgccggtt tcacggtcgt aaatacgggt gctctgacca atgtatacgc
    28021 ccatggaaat gacggaacct tcttcgacaa tcaccccttc aactacttca gagcgtgcgc
    28081 caatgaagca gttatcttca atgatggttg ggttagcctg cagcggttcc agcacgccgc
    28141 cgatgcccac gccaccggaa aggtggacgt ttttaccaat ctgcgcacaa gaaccgacgg
    28201 tcgcccaggt atcaaccatg gtgccttcat caacatatgc gccgatgttg acgtaagacg
    28261 gcatcagcac ggtgttacgg gcaataaacg caccctgacg taccgccgct ggtggcacaa
    28321 cgcggaagcc ttctttctgg aaacgtgctt cgtcgtagtc ggcgaatttc attggcactt
    28381 tgtcgaagta gcggctttct gccccttcga tcacctgatt atcattaata cggaaagaga
    28441 gcagcaccgc ttttttcaac cactgatgcg tcacccactg accgtcaatt ttttccgcta
    28501 cacgcagtgc accggaatcc agcagggcga tcacctgatt taccgcttcg cgggtaacgg
    28561 tgtctgcgtt ggttggcgtg atctcggcac ggcgttcaaa agcggtttca ataatgttct
    28621 gtaactgctg cattgttaaa ctcttttcat atcagtaaac acatcaccct ttatcgtttg
    28681 gattgagggc ctctgtcaac cgctgatgca cttcctgctg caactcgtta ttaagcgcac
    28741 gccggtcagc ggtggcaatt atgaataaat cttctactcg ctcgccaatg gttgtaattc
    28801 gggcaccatg aagcgaaatt cccagatcgg caaaaatttt cccgactctc gccagcagtc
    28861 ctggctggtc gagcgcgata agctcaagga acgatttgcg gtcggtatgg gtcggcaaaa
    28921 acgttacttc ggtttcaaca gtaaaatggc gtaatttggc gggttggcga cggggctgcg
    28981 gtggctgcca gctactttgc gtcagtactt gctccagacc aaaccgaata acctcatgac
    29041 gatctgcgga cagcgggctg ccatcgggtt ccagcacgat aaaggtatcc atcgccatac
    29101 cgtcgcgagt ggtgaaaatt tgtgcgtcgt gaacacttaa attgcggcgg tctaattcgg
    29161 cacagacggc ggcaaacaga taggggcggt ccgggctcca gataaaaatc tcggtgcctc
    29221 cacgcgtagc ctgcgggcta agcaatacca gtggtttgct taaatcatgc tgtaataaat
    29281 ggcgggcatg ccaggccagt tgatttgggc tatggcggac aaaatagtta gcacgacagc
    29341 gtgaccaaat ttggtgcagc gcctcttcgt cgatgttatc catgcgcagt agtgccagtg
    29401 cctggagttg gtgatggcga acccgttcgc gcatatccgg cgtgttttgc attccgcgtc
    29461 gtagctgctt ttcggtggca aaatagagtt cgcgcaacag actttgcttc cagctattcc
    29521 acagcgtttc gttggtggcg caaatgtcag ccactgtcag gcataccaga tagcgcagac
    29581 gattttccgt ttgaacttct tcggcaaact gcttgatgac ttcagggtcc tgaatatcgc
    29641 ggcgttgtgc tgtcaccgac atcagcaagt gctggcgaac cagccaggca accagctgtg
    29701 tttcgcgtga gttcagcccg tggagttctg caaaatgcac tacatcctga gcaccgagaa
    29761 tggagtggtc gccgccgcgt cctttggcga tatcgtgaaa cagcgcggcg atgaaaatca
    29821 gctcagttga cggcaggcgc ggccagacgt ccacacacaa cggatggcgc tggcgcgttt
    29881 cttcactggc aaaactctcc agtttcagca tcacgcggat agtatgttca tccaccgtgt
    29941 aggcgtggaa cagatcaaac tgcatctgcc cgacgatatg cgaccattgc ggcatatacg
    30001 cgccgagcac gctatggcga tgcattggca atagcccgcg ccgcaccgct ccggggtgac
    30061 gcagaatgct caaaaacagt tttcgtgctt ccggaatatt acacagcggt tgttgcagat
    30121 ggcgacgggc atggcgtaac tggcgcagcg tggtggagta aatgccggtg atcgcactgt
    30181 tgcgcaccat ggtgtagaac atacgcaaga tggcttccgg ctggcgcata aatagtgttt
    30241 catcacgcag gtcgattagc gtaccgcgta gctgaaactc atcgtcgatt ggacgtggtt
    30301 tttcgtcggc aggaagggcg aggatggctt catcgaacag ttgcagcagc atctggttga
    30361 gttcactgac gcggcgtgta acgcggaagt aatccttcat catccgctcg accggttcgt
    30421 tgccttcacc actgtaattc agacgctgag cgacgctaag ttggcgatcg aataacaggc
    30481 gattatcgta acggctgacg accagatgca gggcaaagcg aatacgccac agtatatgca
    30541 gacattcgtt taattccgcc cgctccgctg aggttaagaa gccaaaccca accatttcat
    30601 ccagcgatgt tgcgccaaaa tgacggcggg ccacccattg cagagtgtgg atatcgcgca
    30661 agccgccagg gctacttttg atgtctggtt caagattgta gctggtgccg tggtaacgct
    30721 gatggcgctg gttctgttct tcaactttcg ccgcgtagaa cttgtcggaa ggccagaatc
    30781 cttcgctaaa aatatgtttt tgcagttcga ggaagagcgc aacatcgcca attaataagc
    30841 gggattcgat taaattggtg gcgacggtta aatccgataa cccttccagc atgcactctt
    30901 caagcgtgcg cacactatga ccgacttcca gctttacatc ccagagcagc gttaacagct
    30961 cgcccacttt ttgcgcctga tcgtccggga gctttttacg gcttaaaatc agtaaatcga
    31021 tgtcagaaag tggatgcagc tcgccacgac cgtagccacc gacggcgacc aatgccaggt
    31081 cggcaatctg gctgaatccc gcttcaatcc ataatcgttg caggagctgg tcgataaact
    31141 cggtgcgcgc ctcaatcaac tgttctgcag agatcccatt gtcaaaggca tcacccagcc
    31201 aacgctggaa agtatcgata tgggctttta tcccaccgac ggttaattca tcacggggcc
    31261 agacgcatgg attttgcggt tgaccgggca gggtggggag agcggtgttt gcgtactgtt
    31321 ctggaagggt attcattgtg cgccactcat aagattaaat tatcgcatta aaaaagccgg
    31381 cattcgccgg cttcatctta ttcgtcgtgc gagattatcg ccgggatggt gtcatccttg
    31441 cgtagcgtca gaatttcgca gccgttatca gtcaccacaa tagtatgctc atattgtgca
    31501 gacaagctgc gatctttggt ttttaccgtc cagccatctt tcatggtgcg gatctctttt
    31561 ttacccgcgt tgaccattgg ctcgatggtg aacgtcatcc caggtttcag tacgacgttg
    31621 gtttcacggg agtcatagtg cagcacctgc ggttcttcat ggaagccgcg accaataccg
    31681 tgtccgcaat attcacgaac gacggagaag ccttctgctt cgacaaactt ctgaatcgcc
    31741 gcaccgattt cgcgcaggtt aatgcctggt ttgaccatgc gcagcgccag gtacaggctt
    31801 tcttgcgtga tgcggcacag acgttcgccc atgatggtcg gcttaccgac gataaacatt
    31861 ttcgaggtat cgccgtggaa accatctttg attacggtga catcaatgtt aacgatatcg
    31921 ccatctttca gcagcttcgc atcgtccggg ataccgtggc acaccacttc attaatagag
    31981 atgcaaacgg atttcggata gccgtgatag ccgaggcagg cagaaaccgc gtgttgttca
    32041 ttaacaatgt aatcattaca gatgcgatcc agctcgccgg tgctgacgcc cggtttaaca
    32101 tacggttcga tcatctccag cacttcggca gccagtcggc cagcgacgcg cattttttcg
    32161 atatcttctg gggtcttgat tgagatagcc attaattctg tccatcagcg tcggtgatac
    32221 cgacaatata tatgtaagtg ccgtcaatgg tatcacaccc gggcaaattg agaatcattc
    32281 tgaatttcgc caaacgtgcc actgaacgtt ttctataata gaaaattcaa cgtctgatgc
    32341 tgtacacagc gccaacaatt attggtgtcc atgacgtatt tgtggtataa agcgcgccgg
    32401 acttccgatc catttcgtat acacagactg gacggaagcg acaatctcac tttgtgtaac
    32461 aacacacacg tatcggcaca tattccgggg tgccctttgg ggtcggtaat atgggatacg
    32521 tggaggcata accccaactt ttatatagag gttttaatca tggcaactgt ttccatgcgc
    32581 gacatgctca aggctggtgt tcacttcggt caccagaccc gttactggaa cccgaaaatg
    32641 aagccgttca tcttcggtgc gcgtaacaaa gttcacatca tcaaccttga gaaaactgta
    32701 ccgatgttca acgaagctct ggctgaactg aacaagattg cttctcgcaa aggtaaaatc
    32761 cttttcgttg gtactaaacg cgctgcaagc gaagcggtga aagacgctgc tctgagctgc
    32821 gaccagttct tcgtgaacca tcgctggctg ggcggtatgc tgactaactg gaaaaccgtt
    32881 cgtcagtcca tcaaacgtct gaaagacctg gaaactcagt ctcaggacgg tactttcgaa
    32941 aagctgacca agaaagaagc gctgatgcgc actcgtgagc tggagaaact ggaaaacagc
    33001 ctgggcggta tcaaagacat gggcggtctg ccggacgctc tgtttgtaat cgatgctgac
    33061 cacgaacaca ttgctatcaa agaagcaaac aacctgggta ttccggtatt tgctatcgtt
    33121 gataccaact ctgatccgga cggtgttgac ttcgttatcc cgggtaacga cgacgcaatc
    33181 cgtgctgtga ccctgtacct gggcgctgta gctgcaaccg tacgtgaagg ccgttctcag
    33241 gatctggctt cccaggcgga agaaagcttc gtagaagctg agtaataagg cttgataact
    33301 cccccaaaat agttcgagtt gcagaaaggc ggcaagctcg agaattcccg ggagcttaca
    33361 tcagtaagtg accgggatga gcgagcgaag ataacgcatc tgcggcgcga aatatgaagg
    33421 gggagagccc ttatagacca ggtagtacac gtttggttag ggggcctgca tatggccccc
    33481 tttttcactt ttatatctgt gcggtttaat gccgggcaga tcacatctcc gaggatttta
    33541 gaatggctga aattaccgca tccctggtaa aagagctgcg tgagcgtact ggcgcaggca
    33601 tgatggattg caaaaaagca ctgactgaag ctaacggcga catcgagctg gcaatcgaaa
    33661 acatgcgtaa gtccggtgct attaaagcag cgaaaaaagc aggcaacgtt gctgctgacg
    33721 gcgtgatcaa aaccaaaatc gacggcaact acggcatcat tctggaagtt aactgccaga
    33781 ctgacttcgt tgcaaaagac gctggtttcc aggcgttcgc agacaaagtt ctggacgcag
    33841 ctgttgctgg caaaatcact gacgttgaag ttctgaaagc acagttcgaa gaagaacgtg
    33901 ttgcgctggt agcgaaaatt ggtgaaaaca tcaacattcg ccgcgttgct gcgctggaag
    33961 gcgacgttct gggttcttat cagcacggtg cgcgtatcgg cgttctggtt gctgctaaag
    34021 gcgctgacga agagctggtt aaacacatcg ctatgcacgt tgctgcaagc aagccagaat
    34081 tcatcaaacc agaagacgta tccgctgaag tggtagaaaa agaataccag gtacagctgg
    34141 atatagcgat gcagtctggt aagccgaaag aaatcgcaga gaaaatggtt gaaggccgca
    34201 tgaagaaatt caccggcgaa gtttctctga ccggtcagcc gttcgttatg gaaccaagca
    34261 aaactgttgg tcagctgctg aaagagcata acgctgaagt gactggcttc atccgcttcg
    34321 aagtgggtga aggcatcgag aaagttgaga ctgactttgc agcagaagtt gctgcgatgt
    34381 ccaagcagtc ttaattatca aaaaggagcc gcctgagggc ggcttctttt tgtgcccatc
    34441 ttgtaaattc agctaaccct tgtggggctg cgctgaaaag cgacgtacaa tgtcgctagt
    34501 attaattcat ttcaatcgtt gacagtctca ggaaagaaac atggctacca atgcaaaacc
    34561 cgtctataaa cgcattctgc ttaagttgag tggcgaagct ctgcagggca ctgaaggctt
    34621 cggtattgat gcaagcatac tggatcgtat ggctcaggaa atcaaagaac tggttgaact
    34681 gggtattcag gttggtgtgg tgattggtgg gggtaacctg ttccgtggcg ctggtctggc
    34741 gaaagcgggt atgaaccgcg ttgtgggcga ccacatgggg atgctggcga ccgtaatgaa
    34801 cggcctggca atgcgtgatg cactgcaccg cgcctatgtg aacgctcgtc tgatgtccgc
    34861 tattccattg aatggcgtgt gcgacagcta cagctgggca gaagctatca gcctgttgcg
    34921 caacaaccgt gtggtgatcc tctccgccgg tacaggtaac ccgttcttta ccaccgactc
    34981 agcagcttgc ctgcgtggta tcgaaattga agccgatgtg gtgctgaaag caaccaaagt
    35041 tgacggcgtg tttaccgctg atccggcgaa agatccaacc gcaaccatgt acgagcaact
    35101 gacttacagc gaagtgctgg aaaaagagct gaaagtcatg gacctggcgg ccttcacgct
    35161 ggctcgtgac cataaattac cgattcgtgt tttcaatatg aacaaaccgg gtgcgctgcg
    35221 ccgtgtggta atgggtgaaa aagaagggac tttaatcacg gaataattcc cgtgatggat
    35281 aaataagggt aagattccgc gtaagtatcg cgggggcgta agtctggtta taaggcgtta
    35341 ttgttgcagg cagtttggtc acggccagcg cgcagcaacc ggagcgtaca aaagtacgtg
    35401 aggatggcga gcactgctcg gggccaaaat ggcaaataaa atagcctaat aatccagacg
    35461 attacccgta atatgtttaa tcagggctat acttagcaca cttccactgt gtgtgactgt
    35521 ctggtctgac tgagacaagt tttcaaggat tcgtaacgtg attagcgata tcagaaaaga
    35581 tgctgaagta cgcatggaca aatgcgtaga agcgttcaaa acccaaatca gcaaaatacg
    35641 cacgggtcgt gcttctccca gcctgctgga tggcattgtc gtagaatatt acggcacgcc
    35701 gacgccgctg cgtcagctgg caagcgtaac ggtagaagat tcccgtactc tgaaaatcaa
    35761 cgtgtttgat cgttcaatgt ctccggccgt tgaaaaagcg attatggcgt ccgatcttgg
    35821 cctgaacccg aactctgcgg gtagcgacat ccgtgttccg ctgccgccgc tgacggaaga
    35881 acgtcgtaaa gatctgacca aaatcgttcg tggtgaagca gaacaagcgc gtgttgcagt
    35941 acgtaacgtg cgtcgtgacg cgaacgacaa agtgaaagca ctgttgaaag ataaagagat
    36001 cagcgaagac gacgatcgcc gttctcagga cgatgtacag aaactgactg atgctgcaat
    36061 caagaaaatt gaagcggcgc tggcagacaa agaagcagaa ctgatgcagt tctgatttct
    36121 tgaacgacaa aaacgccgct cagtagatcc ttgcggatcg gctggcggcg ttttgctttt
    36181 tattctgtct caactctgga tgtttcatga agcaactcac cattctgggc tcgaccggct
    36241 cgattggttg cagcacgctg gacgtggtgc gccataatcc cgaacacttc cgcgtagttg
    36301 cgctggtggc aggcaaaaat gtcactcgca tggtagaaca gtgcctggaa ttctctcccc
    36361 gctatgccgt aatggacgat gaagcgagtg cgaaacttct taaaacgatg ctacagcaac
    36421 agggtagccg caccgaagtc ttaagtgggc aacaagccgc ttgcgatatg gcagcgcttg
    36481 aggatgttga tcaggtgatg gcagccattg ttggcgctgc tgggctgtta cctacgcttg
    36541 ctgcgatccg cgcgggtaaa accattttgc tggccaataa agaatcactg gttacctgcg
    36601 gacgtctgtt tatggacgcc gtaaagcaga gcaaagcgca attgttaccg gtcgatagcg
    36661 aacataacgc catttttcag agtttaccgc aacctatcca gcataatctg ggatacgctg
    36721 accttgagca aaatggcgtg gtgtccattt tacttaccgg gtctggtggc cctttccgtg
    36781 agacgccatt gcgcgatttg gcaacaatga cgccggatca agcctgccgt catccgaact
    36841 ggtcgatggg gcgtaaaatt tctgtcgatt cggctaccat gatgaacaaa ggtctggaat
    36901 acattgaagc gcgttggcta tttaacgcca gcgccagcca gatggaagtg ctgattcacc
    36961 cgcagtcagt gattcactca atggtgcgct atcaggacgg cagtgttctg gcgcagctgg
    37021 gggaaccgga tatgcgtacg ccaattgccc acaccatggc atggccgaat cgcgtgaact
    37081 ctggcgtgaa gccgctcgat ttttgcaaac taagtgcgtt gacatttgcc gcaccggatt
    37141 atgatcgtta tccatgcctg aaactggcga tggaggcgtt cgaacaaggt caggcagcga
    37201 cgacagcatt gaatgccgca aacgaaatca ccgttgctgc ttttcttgcg caacaaatcc
    37261 gctttacgga tatcgctgcg ttgaatttat cggtactgga aaaaatggat atgcgcgaac
    37321 cacaatgtgt ggacgatgtg ttatctgttg atgcgaacgc gcgtgaagtc gccagaaaag
    37381 aggtgatgcg tctcgcaagc tgaggataat ccggctacag agagtctcgc tatttgttag
    37441 cgtagggctt cagtgatata gtctgcgcca tctgatcgta agtagttggc tttataaggt
    37501 caggtatgcc gtggttttgc acggcttttt ttgtataggc ttcagtattc ctgagtaccg
    37561 taaaccctgt cagggaataa aaaacgcgtg atgttgtctg ctactcaact acttagcgaa
    37621 aaattgccag cgcatggctg ccgtcatgtt gcgatcatta tggacggcaa tggtcgctgg
    37681 gcaaaaaagc aagggaagat tcgtgccttt gggcataaag ccggggcaaa atccgtccgc
    37741 cgggctgtct cttttgcggc caacaacggt attgaggcgt taacgctgta tgcctttagt
    37801 agtgaaaact ggaaccgacc agcgcaggaa gtcagtgcgt taatggaact gtttgtgtgg
    37861 gcgctcgata gcgaagtaaa aagtctgcac cgacataacg tgcgtctgcg tattattggc
    37921 gataccagtc gctttaactc gcgtttgcaa gaatgtattc gtaaatctga agcgctaaca
    37981 gccgggaata ccggtctgac gctgaatatt gcggcgaact acggtggacg ttgggatata
    38041 gtccagggag tcaggcaact ggctgaaaag gtgcagcaag gaaacctgca accagatcag
    38101 atagatgaag agatgctaaa ccagcatgtc tgtatgcatg aactggcccc tgtagattta
    38161 gtaattagga ctggggggga gcatcgcatt agtaactttt tgctttggca aattgcctat
    38221 gccgaacttt actttataga tgttctctgg cccgatttcg atgaacaaga ctttgaaggg
    38281 gcgttaaatg cctttgctaa tcgagagcgt cgtttcggcg gcaccgagcc cggtgatgaa
    38341 acagcctgat ggggggcgct tttgctgaag tatcgcctga tatctgcttt tgtgttaata
    38401 cccgtcgtca tcgcggcgtt gtttctgttg ccgccggtgg ggttcgccat tgtaacgctg
    38461 gtggtctgca tgctggcagc gtgggaatgg ggacagctta gcggttttac cactcgttcg
    38521 cagcgagtat ggttggcggt gttatgcggg ttattgttgg cgctgatgct ttttctgttg
    38581 ccggaatatc accgaaatat tcatcaaccg ctggttgaaa tctcactttg ggcttcgctg
    38641 ggttggtgga ttgtctcgct attgctggtg ctgttttacc caggttccgc agcaatctgg
    38701 cgtaactcta aaacattgcg ccttattttt ggcgtgctaa ccattgttcc cttcttctgg
    38761 ggcatgctgg cgttacgggc ctggcactat gacgagaatc attacagtgg cgcaatatgg
    38821 ctgctctatg tcatgatcct ggtatggggc gctgactccg gcgcatatat gtttggcaaa
    38881 ttgtttggta aacataagct ggcaccgaag gtttctccgg gtaaaacctg gcaaggcttt
    38941 ataggtggac tcgctactgc agcggtaatc tcatggggtt atggcatgtg ggcgaatctc
    39001 gacgtcgctc ccgtcacctt actcatttgc tctattgtcg cagcgttagc ctcagtgctc
    39061 ggcgatctga ccgagagtat gtttaagcgt gaagcaggaa ttaaggacag cggtcattta
    39121 attccaggac acggtggtat tttagatcgt attgatagcc tgacggctgc ggtaccggtc
    39181 tttgcttgct tgttgttact ggtattcagg acgctttaac ggaaggtaat atgctgagtt
    39241 ttctctggga tttggcttcg ttcatcgttg cactgggtgt acttatcact gtgcatgaat
    39301 ttggtcattt ctgggttgcc cggcgttgtg gtgttcgcgt tgagcgtttc tcaatagggt
    39361 ttggtaaggc gctctggcgg cgaactgata agctcggcac cgaatatgtt atcgccctga
    39421 tcccgctggg cggttatgtc aaaatgctgg atgagcgcgc agaaccggtc gttccggaac
    39481 tccgccacca tgccttcaat aataaatctg ttggccaacg agcggcgatt attgccgcag
    39541 gtccggttgc aaacttcatt tttgctatct ttgcctactg gctggttttt attattggtg
    39601 tgcctggcgt acgtccggtg gttggtgaaa tagcagccaa ttcgatagct gcggaagcac
    39661 aaattgcacc aggtacggaa ctaaaagccg tagatggtat cgaaacgcct gattgggatg
    39721 ccgtgcgttt gcagttggtc gataaaattg gcgatgaaag caccaccatt acagtagcgc
    39781 catttggcag cgaccaacgg cgggatgtaa agctcgattt acgtcactgg gcgtttgagc
    39841 ctgataaaga agatccggta tcttcgctgg ggattcgtcc tcgtgggctg caaattgaac
    39901 ctgtactgga aaatgtgcag ccaaactcgg cggcaagcaa ggcaggtttg caagcaggcg
    39961 acaggatcgt taaagtcgat ggtcagccct taacgcagtg ggtgaccttt gtgatgcttg
    40021 tccgggataa cccggggaaa tccttagcgt tagaaatcga aaggcaggga agtcccttgt
    40081 ctttgacatt aatcccggag agtaaaccgg gtaatggtaa agcgattggt tttgtcggta
    40141 ttgagccgaa agtcattcct ttgccagatg agtataaagt tgtacgccag tatgggccgt
    40201 tcaacgccat cgtcgaagcc acggacaaaa cgtggcagct gatgaagctg acggtcagta
    40261 tgctgggaaa attgatcacc ggtgatgtga aactgaacaa cctcagtggg ccgatctcta
    40321 tcgccaaggg ggctgggatg acagcggaac tcggggtagt ttattacctg ccgtttcttg
    40381 cgcttattag cgtgaactta gggataatta acctgtttcc gttgcccgta cttgacgggg
    40441 cgcatctgct gttccttgcg atcgaaaaga tcaagggcgg accggtatcc gagcgggttc
    40501 aagacttttg ttatcgcatt ggctcgattc tgctggtgct gttaatgggg cttgcacttt
    40561 tcaatgattt ctctcggtta tgagagttag ttaggaagaa cgcataataa cgatggcgat
    40621 gaaaaagttg ctcatagcgt cgctgctgtt tagcagcgcc accgtatacg gtgctgaagg
    40681 gttcgtagtg aaagatattc atttcgaagg ccttcagcgt gtcgccgttg gtgcggccct
    40741 cctcagtatg ccggtgcgta caggcgacac ggttaatgat gaagatatca gtaataccat
    40801 tcgcgctctg tttgctaccg gcaactttga ggatgttcgc gtccttcgtg atggtgatac
    40861 ccttctggtt caggtaaaag aacgtccgac cattgccagc attactttct ccggtaacaa
    40921 atcggtgaaa gatgacatgc tgaagcaaaa cctcgaggct tctggtgtgc gtgtgggcga
    40981 atccctcgat cgcaccacca ttgccgatat cgagaaaggt ctggaagact tctactacag
    41041 cgtcggtaaa tatagcgcca gcgtaaaagc tgtcgtgacc ccgctgccgc gcaaccgtgt
    41101 tgacctaaaa ctggtgttcc aggaaggtgt gtcagctgaa atccagcaaa ttaacattgt
    41161 tggtaaccat gctttcacca ccgacgaact gatctctcat ttccaactgc gtgacgaagt
    41221 gccgtggtgg aacgtggtag gcgatcgtaa ataccagaaa cagaaactgg cgggcgacct
    41281 tgaaaccctg cgcagctact atctggatcg cggttatgcc cgtttcaaca tcgactctac
    41341 ccaggtcagt ctgacgccag ataaaaaagg tatttacgtc acggtgaaca ttaccgaagg
    41401 cgatcagtac aagctttctg gcgttgaagt gagcggcaac cttgccgggc actccgctga
    41461 aattgagcag ctgactaaga tcgagccggg cgagctgtat aacggcacca aagtgaccaa
    41521 gatggaagat gacatcaaaa agcttctcgg tcgctatggt tatgcctatc cgcgcgtaca
    41581 gtcgatgcct gaaattaacg atgccgacaa aaccgttaaa ttacgcgtga acgttgatgc
    41641 gggtaaccgt ttctacgtgc gtaagatccg ttttgaaggt aacgatacct cgaaagatgc
    41701 cgtcctgcgt cgcgaaatgc gtcagatgga aggtgcatgg ctgggaagcg atctggtcga
    41761 tcagggtaag gagcgtctga atcgtctggg cttctttgaa actgtcgata ccgataccca
    41821 acgtgttccg ggtagcccgg accaagtaga tgtagtctac aaggtgaaag aacgtaacac
    41881 cggtagcttc aacttcggga ttggttacgg tactgaaagt ggcgtgagct tccaggctgg
    41941 cgtgcaacag gataactggt taggtacagg ttatgctgtt ggtatcaacg ggaccaaaaa
    42001 cgattaccag acctatgctg aattgtcggt aaccaacccg tacttcactg tagatggtgt
    42061 aagcctcggt ggtcgtctct tctataatga cttccaggca gatgacgccg acctgtccga
    42121 ctataccaac aagagttatg gtacagacgt gacgttgggc ttcccgatca acgaatataa
    42181 ctcgctgcgt gcaggtctgg gttatgtaca taactccctg tccaacatgc agcctcaggt
    42241 tgcgatgtgg cgttatctgt actctatggg tgaacatccg agcacctctg atcaggataa
    42301 cagcttcaaa acggacgact tcacgttcaa ctatggttgg acctataaca agcttgaccg
    42361 tggttacttc ccgacagatg gttcacgtgt caacctgacc ggtaaagtga ccattcctgg
    42421 atcggataac gaatactaca aagtgacgtt agacacggcg acttatgtgc cgatcgatga
    42481 cgatcacaaa tgggttgttc tggggcgtac ccgctggggt tatggtgatg gtttaggcgg
    42541 caaagagatg ccgttctacg agaacttcta tgccggtggt tccagcaccg tccgtggctt
    42601 ccagtccaat accattggtc cgaaagcagt ttacttcccg catcaggcca gtaattatga
    42661 tccggactat gattacgaat gtgcgactca ggacggcgcg aaagacctgt gtaaatcgga
    42721 tgatgctgta ggcggtaacg ccatggcggt tgccagcctc gagttcatca ccccgacgcc
    42781 gtttattagc gataagtatg ctaactcggt tcgtacttcc ttcttctggg atatgggtac
    42841 cgtttgggat acaaactggg attccagcca atattctgga tatccggact atagtgatcc
    42901 aagcaatatc cgtatgtctg cgggtatcgc attacaatgg atgtccccat tggggccgtt
    42961 ggtgttctcc tacgcccagc cgttcaaaaa gtacgatgga gacaaggcag aacagttcca
    43021 gtttaacatc ggtaaaacct ggtaagtgtt ctccacaaag gaatgtagtg gtagtgtagc
    43081 gatgacttta ggcgatcaat ataagatcgc cgggccacgc aaagaactgc accctccggt
    43141 gcaaatggga tggtaaggag tttattgtga aaaagtggtt attagcggca ggtctcggtt
    43201 tagcactggc aacttctgct caggcggctg acaaaattgc aatcgtcaat atgggcagcc
    43261 tgttccagca ggtagcgcag aaaaccggtg tttctaacac gctggaaaat gagttcaaag
    43321 gccgtgccag cgaactgcag cgtatggaaa ccgatctgca ggctaaaatg aaaaagctgc
    43381 agtccatgaa agcgggcagc gatcgcacta agctggaaaa agacgtgatg gctcagcgcc
    43441 agacttttgc tcagaaagcg caggcttttg agcaggatcg cgcacgtcgt tccaacgaag
    43501 aacgcggcaa actggttact cgtatccaga ctgctgtgaa atccgttgcc aacagccagg
    43561 atatcgatct ggttgttgat gcaaacgccg ttgcttacaa cagcagcgat gtaaaagaca
    43621 tcactgccga cgtactgaaa caggttaaat aagtaatgcc ttcaattcga ctggctgatt
    43681 tagcgcagca gttggatgca gaactacacg gtgatggcga tatcgtcatc accggcgttg
    43741 cgtccatgca atctgcacaa acaggtcaca ttacgttcat ggttaaccca aaataccgtg
    43801 agcatttagg cttgtgccag gcgtccgcgg ttgtcatgac ccaggacgat cttcctttcg
    43861 cgaaaagtgc cgcgctggta gtgaagaatc cctacctgac ttacgcgcgc atggcgcaaa
    43921 ttttagatac cacgccgcag cccgcgcaga acattgcacc cagtgcggtg atcgacgcga
    43981 cggcgaagct ggggaacaat gtatcgattg gcgctaacgc ggtgattgaa tccggcgttg
    44041 aactgggcga taacgtgatt atcggtgccg gttgcttcgt aggtaaaaac agcaaaatcg
    44101 gtgcaggttc gcgtctctgg gcgaacgtaa ccatttacca tgagatccag atcggtcaga
    44161 attgcctgat ccagtccgga acagtggtag gcgcagacgg ctttggttat gccaacgatc
    44221 gtggtaactg ggttaagatc ccacagattg gtcgcgtaat tattggcgat cgcgtggaga
    44281 tcggtgcctg cactaccatc gatcgcggcg cactggatga cactgttatt ggcaatggcg
    44341 tgatcattga taaccagtgc cagattgcac ataacgtcgt gattggcgac aatacggcgg
    44401 ttgccggtgg cgtcattatg gcgggcagcc tgaaaattgg tcgttactgc atgatcggcg
    44461 gagccagcgt aatcaacggg catatggaaa tatgcgacaa agtgacggtt acgggcatgg
    44521 gtatggtgat gcgtcccatc actgaaccag gcgtctattc ctcaggcatt ccgctgcaac
    44581 ccaacaaagt ctggcgcaaa accgctgcac tggtgatgaa cattgatgac atgagcaagc
    44641 gtctgaaatc gcttgagcgc aaggttaatc aacaagacta acgttccatc ttttgttcgc
    44701 caaactttac ggcctgtctc attcttacga ttgcggcagg ccgtgttatt attgtcgttt
    44761 cttatatttt gacaggaaga gtatcttgac tactaacact catactctgc agattgaaga
    44821 gattttagaa cttctgccgc accgtttccc gttcttactg gtggatcgcg tgctggattt
    44881 tgaagaaggt cgttttctgc gcgcagtaaa aaatgtctct gtcaatgagc cattcttcca
    44941 gggccatttc cctggaaaac cgattttccc gggtgtgctg attctggaag caatggcaca
    45001 ggcaacaggt attctggcgt ttaaaagcgt aggaaaactg gaaccgggtg agctgtacta
    45061 cttcgctggt attgacgaag cgcgcttcaa gcgcccggtc gtgcctggcg atcaaatgat
    45121 catggaagtc actttcgaaa aaacgcgccg cggcctgacc cgttttaaag gggttgctct
    45181 ggtcgatggt aaagtagttt gcgaagcaac gatgatgtgt gctcgtagcc gggaggcctg
    45241 atacgtgatt gataaatccg cctttgtgca tccaaccgcc attgtggaag agggcgcgtc
    45301 aattggcgcg aacgcacaca ttggtccttt ttgtatcgtt ggaccccatg tcggaattgg
    45361 tgagggtacc gtactgaaat ctcacgttgt cgtgaatggt catactaaaa ttggccgcga
    45421 taatgagatt tatcagttcg cctccatcgg cgaagttaac caggatctga aatatgctgg
    45481 cgaaccgacc cgtgtggaaa tcggcgatcg taaccgcatt cgcgaaagcg tcaccattca
    45541 tcgtggcaca gtccagggcg gtggattgac gaaggtgggc agcgacaact tactgatgat
    45601 caacgcgcac attgcgcacg attgtacggt aggtaaccgc tgtattctcg ccaacaacgc
    45661 aacgctggcg ggtcacgtat cggttgacga cttcgcgatc atcggcggca tgaccgcagt
    45721 ccatcagttc tgcatcattg gtgcgcacgt gatggttggc ggctgctccg gtgtggcgca
    45781 ggacgtccct ccttatgtca ttgcgcaggg taaccacgca acgccgttcg gtgtcaatat
    45841 cgaagggctg aagcgccgcg gattcagccg tgaggcgatt accgctatcc gcaatgcgta
    45901 taagctgatt tatcgtagcg gtaaaacgct cgatgaagtg aaaccggaaa ttgctgaact
    45961 ggcggaaaca tatccggaag tgaaagcctt taccgatttc ttttcacgct caacgcgcgg
    46021 tctgattcgt taatgactga acagcgtcca ttaacgattg ccctggtcgc cggagaaacc
    46081 tccggcgata tcctgggggc cggtttaatc cgcgctctga aagaacgtgt gcccaacgcc
    46141 cgctttgttg gtgttgccgg gccacgaatg caggctgaag gctgcgaagc ctggtacgaa
    46201 atggaagaac tggcggtgat gggcattgtt gaagtgctcg gtcgtctgcg tcgcttactg
    46261 catattcgtg ccgatctgac aaagcgtttt ggcgaactga agccagatgt ttttgttggt
    46321 attgatgcgc ctgacttcaa tattactctt gaaggtaacc tcaaaaagca gggtatcaaa
    46381 accattcatt acgtcagtcc gtcagtctgg gcgtggcgac agaaacgtgt tttcaaaata
    46441 ggcagagcca ccgatctggt gctcgcattt ctgcctttcg aaaaagcgtt ttatgacaaa
    46501 tacaacgtac cgtgccgctt tatcggtcat accatggctg atgccatgcc attagatcca
    46561 gataaaaatg ccgcccgtga tgtgctgggg atccctcacg atgcccactg cctggcgttg
    46621 ctaccgggga gccgtggtgc agaagttgaa atgcttagtg ccgatttcct gaaaacggcc
    46681 cagcttttgc gccagacata tccggatctc gaaatcgtgg tgccactggt gaatgccaaa
    46741 cgccgcgagc agtttgaacg catcaaagct gaagtcgcgc gagacttttc agttcatttg
    46801 ctggatggga tgggccgtga ggcgatggtc gccagcgatg cggcgctact ggcgtcgggt
    46861 acggcagccc tggagtgtat gctggcgaaa tgcccgatgg tggtgggata tcgcatgaag
    46921 ccttttacct tctggttggc gaagcggctg gtgaaaactg attatgtctc gctgccaaat
    46981 ctgctggcgg gcagagagtt agtcaaagag ttattgcagg aagagtgtga gccgcaaaaa
    47041 ctggctgcgg cgctgttacc gctgttggcg aacgggaaaa tcagccacgc gatgcacgat
    47101 accttccgtg aactgcatca gcagatccgc tgcaatgccg atgagcaggc ggcacaagcc
    47161 gttctggagt tagcacaatg atcgaatttg tttatccgca cacgcagctg gttgcgggtg
    47221 tggatgaagt cggacgcggg ccgttagttg gcgcggtcgt caccgctgcg gtgatccttg
    47281 acccggcgcg cccgattgcc gggctgaatg attccaaaaa gctgagcgaa aaacgccgtc
    47341 tggcgctctg tgaagagatc aaagagaaag cgttgagctg gagtctgggc cgcgcggaac
    47401 cccacgaaat cgacgagctg aacattcttc atgcgaccat gctggcgatg cagcgtgccg
    47461 tcgctgggct gcatattgcg ccggaatatg tgttgattga tggtaaccgc tgcccgaaat
    47521 taccgatgcc tgcgatggct gtggtgaaag gcgatagccg cgtaccggaa atcagtgccg
    47581 cgtctatcct ggcgaaagtg acgcgtgacg ccgaaatggc ggcgctggat attgttttcc
    47641 cgcaatatgg ttttgcccaa cacaaagggt acccaaccgc ttttcatctg gaaaaactgg
    47701 ctgaacacgg cgcgaccgaa caccatcggc gcagctttgg gcctgtcaaa cgcgcactgg
    47761 gacttgcgtc ctgattcttg tgtcgagatt aagtaaaccg gaatctgaag atgtctgaac
    47821 cacgtttcgt acacctgcgg gtgcacagcg actactcgat gatcgatggc ctggccaaaa
    47881 ctgcaccgtt ggtaaaaaag gcggcggcgt tgggtatgcc agcactggcg atcaccgatt
    47941 tcaccaacct ttgtggtctg gtgaagttct acggagcggg acatggcgca gggattaagc
    48001 ctatcgtcgg ggcagatttt aacgtccagt gcgacctgct gggtgatgag ttaacccacc
    48061 tgacggtact ggcggcgaac aataccggct atcagaatct gacgttgctg atctcaaaag
    48121 cgtatcagcg cgggtacggt gccgctgggc cgatcatcga tcgcgactgg cttatcgaat
    48181 taaatgaagg gttgatcctt ctttccggcg ggcgcatggg cgacgtcgga cgcagtcttt
    48241 tgcgtggtaa cagcgcgctg gtagatgagt gtgtcgcgtt ttatgaagaa cacttcccgg
    48301 atcgctattt tctcgagctg atccgcaccg gcaggccgga tgaagaaagc tatctgcacg
    48361 cggcggtgga actggcggaa gcgcgcggtt tgcccgtcgt ggcgactaac gatgtgcgct
    48421 ttatcgacag cagcgacttt gacgcacacg aaatccgcgt cgcgatccac gacggcttta
    48481 ccctcgacga tcctaaacgc ccgcgtaact attcgccgca gcaatatatg cgtagcgaag
    48541 aggagatgtg tgagctgttt gccgacatcc ccgaagccct tgccaacacc gttgagatcg
    48601 ccaaacgctg taacgtaact gtgcgtcttg gtgaatactt cctgccgcag ttcccgaccg
    48661 gggacatgag caccgaagat tatctggtca agcgtgcaaa agagggcctg gaagagcgtc
    48721 tggccttttt attccctgac gaggaagaac gtgttaagcg ccgcccggaa tatgacgaac
    48781 gtctggagac tgaacttcag gttatcaacc agatgggctt cccgggctac ttcctcatcg
    48841 ttatggaatt tatccagtgg tcgaaagata acggcgtacc ggtagggcca ggccgtggct
    48901 ccggtgcggg ttcactggtg gcctacgcgc tgaaaatcac cgacctcgat ccgctggaat
    48961 ttgacctgct gttcgaacgt ttccttaacc cggaacgtgt ctccatgcct gacttcgacg
    49021 ttgacttctg tatggagaaa cgcgatcagg ttatcgagca cgtagcggac atgtacggtc
    49081 gtgatgcggt atcgcagatc atcaccttcg gtacaatggc ggcgaaagcg gtgatccgcg
    49141 acgtaggccg cgtgctgggg catccgtacg gctttgtcga tcgtatctcg aaactgatcc
    49201 cgcccgatcc ggggatgacg ctggcgaaag cgtttgaagc cgagccgcag ctgccggaaa
    49261 tctacgaagc ggatgaagaa gttaaggcgc tgatcgacat ggcgcgcaaa ctggaagggg
    49321 tcacccgtaa cgccggtaag cacgccggtg gggtggttat cgcgccgacc aaaattaccg
    49381 attttgcgcc gctttactgc gatgaagagg gcaaacatcc ggtcacccag tttgataaaa
    49441 gcgacgttga atacgccgga ctggtgaagt tcgacttcct tggtttgcgt acgctcacca
    49501 tcatcaactg ggcgctggag atgatcaaca agcggcgggc gaagaatggc gagccgccgc
    49561 tggatatcgc cgcgatcccg ctggatgaca agaaaagctt cgacatgctg caacgctcgg
    49621 aaaccacggc ggtattccag cttgaatcgc gcggcatgaa ggatctgatc aagcgtctgc
    49681 aacctgactg cttcgaagat atgatcgcac tggtggcgct gttccgccca ggtccgttgc
    49741 aatcagggat ggtggataac tttatcgacc gtaaacatgg tcgcgaagaa atctcctatc
    49801 cggacgtaca gtggcagcat gaaagcctga aaccggtact ggagccaacc tacggcatca
    49861 tcctgtatca ggaacaggtc atgcagattg cgcaggtgct ttctggttat accctcggtg
    49921 gcgcggatat gctgcgtcgt gcgatgggta agaaaaagcc ggaagagatg gctaagcagc
    49981 gttctgtatt tgctgaaggt gcagaaaaga acggagtcaa cgccgaactg gcgatgaaaa
    50041 tcttcgacct ggtggagaaa ttcgcgggtt acggatttaa caaatcgcac tctgcggcct
    50101 atgctttggt gtcatatcaa acgttatggc tgaaagcgca ctatccggcg gagtttatgg
    50161 cggcggtaat gaccgccgat atggacaaca ccgagaaggt ggtgggcctg gtggatgagt
    50221 gctggcggat ggggctgaaa atcctgccac cagatataaa ctccggtctt taccatttcc
    50281 acgtcaacga cgacggcgaa atcgtgtatg gtattggcgc catcaaaggg gtaggtgaag
    50341 gtccgattga ggccatcatc gaagcccgta ataaaggcgg ctacttccgc gaactgtttg
    50401 atctctgcgc ccgtaccgac accaaaaagt taaaccggcg ggtgctggaa aaactgatca
    50461 tgtccggggc gtttgaccgt cttgggccac accgcgcggc gctgatgaac tcgctgggtg
    50521 atgcgttaaa agcggcagat caacacgcga aagcggaagc tatcggtcag gccgatatgt
    50581 tcggcgtgct ggccgaagag ccggaacaaa ttgaacaatc ctacgccagc tgccaaccgt
    50641 ggccggagca ggtggtgtta gatggggaac gtgaaacgtt aggtctgtac cttacgggac
    50701 accctatcaa ccagtattta aaagagattg agcgttatgt cggaggcgta aggctgaaag
    50761 acatgcaccc gacagaacgt ggtaaagtca tcacggctgc ggggctcgtt gttgccgcgc
    50821 gggttatggt caccaagcgc ggcaatcgta tcggtatctg cacgctggat gaccgttccg
    50881 ggcggctgga agtgatgttg tttactgacg ccctggataa ataccagcaa ttgctggaaa
    50941 aagaccgcat acttatcgtc agcggacagg tcagctttga tgacttcagc ggtgggctta
    51001 aaatgaccgc tcgcgaagtg atggatattg acgaagcccg ggaaaaatat gctagcgggc
    51061 ttgctatctc gctgacggac aggcaaattg atgaccagct tttaaaccga ctccgtcagt
    51121 ctctggaacc ccaccgctct gggacaattc cagtacatct ctactatcag agggcggatg
    51181 cacgcgcgcg gttgcgtttt ggcgcgacgt ggcgtgtctc tccgagcgat cgtttattaa
    51241 acgatctccg tggcctcatt ggttcggagc aggtggaact ggagtttgac taatacagga
    51301 atactatgag tctgaatttc cttgattttg aacagccgat tgcagagctg gaagcgaaaa
    51361 tcgattctct gactgcggtt agccgtcagg atgagaaact ggatattaac atcgatgaag
    51421 aagtgcatcg tctgcgtgaa aaaagcgtag aactgacacg taaaatcttc gccgatctcg
    51481 gtgcatggca gattgcgcaa ctggcacgcc atccacagcg tccttatacc ctggattacg
    51541 ttcgcctggc atttgatgaa tttgacgaac tggctggcga ccgcgcgtat gcagacgata
    51601 aagctatcgt cggtggtatc gcccgtcttg acggtcgtcc ggtgatgatc attggtcatc
    51661 aaaaaggtcg tgaaaccaaa gaaaaaattc gccgtaactt tggtatgcca gcgccagaag
    51721 gttaccgcaa agcactgcgt ctgatgcaaa tggctgaacg ctttaagatg cctatcatca
    51781 cctttatcga caccccgggg gcttatcctg gcgtgggcgc agaagagcgt ggtcagtctg
    51841 aagccattgc acgcaacctg cgtgaaatgt ctcgcctcgg cgtaccggta gtttgtacgg
    51901 ttatcggtga aggtggttct ggcggtgcgc tggcgattgg cgtgggcgat aaagtgaata
    51961 tgctgcaata cagcacctat tccgttatct cgccggaagg ttgtgcgtcc attctgtgga
    52021 agagcgccga caaagcgccg ctggcggctg aagcgatggg tatcatcgct ccgcgtctga
    52081 aagagctgaa actgatcgac tccatcatcc cggaaccgct gggcggcgct caccgtaacc
    52141 cggaagcgat ggcggcatcg ttgaaagcgc aactgctggc ggatctggcc gatctcgatg
    52201 tgttaagcac tgaagattta aaaaatcgtc gttatcagcg cctgatgagc tacggttacg
    52261 cgtaattcgc aaaagttctg aaaaagggtc acttcggtgg ccctttttta tcgccacggt
    52321 ttgagcaggc tatgattaag gaaggatttt ccaggaggaa cacatgaaca tcattgccat
    52381 tatgggaccg catggcgtct tttataaaga tgagcccatc aaagaactgg agtcggcgct
    52441 ggtggcgcaa ggctttcaga ttatctggcc acaaaacagt gttgatttgc tgaaatttat
    52501 cgaacataac cctcgaattt gcggcgtgat ttttgactgg gatgagtaca gtctcgattt
    52561 atgcagcgat atcaatcaac ttaatgaata tctcccgctt tatgccttca tcaacaccca
    52621 ctcgacgatg gatgtcagcg tgcaggatat gcggatggcg ctctggtttt ttgaatatgc
    52681 gctggggcag gcggaagata tcgccattcg tatgcgtcag tacaccaacg aatatcttga
    52741 taacattacg ccgccgttca cgaaagcctt gtttacctac gttaaagagc ggaagtacac
    52801 cttttgtacg ccggggcata tgggcggcac cgcatatcaa aaaagcccgg ttggctgcct
    52861 gttttatgat tttttcggcg ggaataccct caaggctgat gtctctattt cggtcaccga
    52921 gcttggttcg ttgctcgacc acaccgggcc acacctggaa gcggaagagt acatcgcgcg
    52981 gacttttggc gcggaacaga gttatatcgt taccaacgga acatcgacgt cgaacaaaat
    53041 tgtgggtatg tacgccgcgc catccggcag tacgctgttg atcgaccgca attgtcataa
    53101 atcgctggcg catctgttga tgatgaacga tgtagtgcca gtctggctga aaccgacgcg
    53161 taatgcgttg gggattcttg gtgggatccc gcaccgtgaa tttactcgcg acagcatcga
    53221 agagaaagtc gctgccacca cgcaggcaca atggccggtt catgcggtga ttaccaactc
    53281 cacctatgat ggcttgctct acaacaccga ctggatcaaa cagacgctgg atgtcccgtc
    53341 gatccacttc gattccgcct gggtgccgta cacccatttt catccgatct accaggggaa
    53401 aagtgatctt cgaaacgcaa tcgacccaca aaatgctggc ggcgttatcg caggcttcgc
    53461 tgatccacat taaaggcgag tatgacgaag aggcgtttaa cgaagccttt atgatgcata
    53521 ccaccacctc gcccagttat cccattgttg cttcggttga gacggcggcg gcgacgctgc
    53581 gtggtaatcc gggcaaacgg ctgattaacc gttcggtgga gcgggcgctg cattttcgca
    53641 aagaggtcca gcggttgcgg gaagagtctg acggttggtt tttcgatatc tggcaaccgc
    53701 cgcaggtgga tgaagccgaa tgctggcccg ttgcgccagg cgaacagtgg cacggcttta
    53761 acgatgcgga tgccgatcat atgtttctcg atccggttaa agtcactatt ttgataccgg
    53821 ggatggacga acagggcaat atgagcgagg aggggatcct ggcggcgctg gtggcaaaat
    53881 tcctcgacga acgtgggatc gtagtagaga aaaccggccc ttataacctg ctgtttctct
    53941 ttagtattgg tatcgataaa accaaagcaa tgggattatt gcgtgggttg acggaattta
    54001 aacgctctta cgatctcaac ctgcggatca aaaatatgct acccgatctc tatgctgaag
    54061 atcccgattt ctaccgcaat atgcgtattc aggatctggc gcaagggatc cataagctga
    54121 ttcgtaaaca cgatcttccc ggtttgatgt tgtgggcatt cgatactttg ccggaaatta
    54181 tcatgacgcc acatcaggca tggcagagac agattaaagg tgaagtagaa accattgcgc
    54241 tggaacaact ggtcggtaga gtatcggcaa atatgatcct gccttatcca ccgggcgtac
    54301 cgctgttgat gccaggagaa atgctgacca aagagagccg cacggtactc gattttctac
    54361 tgatgctttg ttccgtaggg caacattacc ccggttttga aacggatatt cacggcgcga
    54421 aacaggacga agacggcgtt taccgcgtac gagtcctaaa aatggcggga taacttgcca
    54481 gagcggctta cgggcgagta acgtgctgtt aacaaataaa ggagacgtta tgctgggttt
    54541 aaaacaggtt caccatattg cgattattgc gacggattat gcggtgagca aagctttcta
    54601 ctgcgatatt cttggtttca cgctgcaaag cgaagtctat cgcgaagcgc gcgactcgtg
    54661 gaaaggggat ttggcgctta atgggcaata tgtgattgag cttttctctt ttccgttccc
    54721 gccggagcgc cccagccgac cggaagcttg cggcctgcgt catctggctt ttagcgttga
    54781 tgacatcgat gcggcagtgg cgcaccttga aagccataac gtgaagtgtg aagccatccg
    54841 tgtcgatcca tacacgcaaa aacgcttcac cttctttaac gatccggacg ggctgccgtt
    54901 ggaactgtat gagcagtaag gcttgtcatc gccgcatttg cccggtaacg tgccgggcat
    54961 tgctactgta aaatcgcacc atcatgacac tcacgctcaa tagacaactt ctcacctcac
    55021 gccagatttt ggtcgccttt agcggcgggc ttgactccac cgttctgctg catcagttgg
    55081 tgcagtggcg gacggaaaat ccgggcgtca ctctgcgcgc tattcatgtg catcacggtt
    55141 taagtgccaa tgccgatgcc tgggttacgc attgcgaaaa cgtctgccaa cagtggcagg
    55201 tgccgctggt ggtcgaacgc gtacaacttg cgcaagaggg gctggggatt gaggcccagg
    55261 cgcggcaggc gcgttatcag gcatttgccc gtaccctatt gcccggcgaa gtgctggtca
    55321 ccgcgcaaca tctcgacgat caatgtgaaa cctttctgct ggcgctaaaa cgcggtagcg
    55381 gccctgccgg gctttcggct atggcggaag tttcggagtt tgccggaaca cggcttatcc
    55441 gcccgttgct tgcccgcacg cggggggaac tggcgcagtg ggcattggcg catggtttac
    55501 gctggattga agacgaaagt aatcaggacg actcatacga tcgtaacttt ctgcgcctgc
    55561 gcgtagtgcc gttattgcag cagcgttggc cgcattttgc ggaagcaacg gcccgcagcg
    55621 ccgcactttg tgctgaacaa gagagtctgt tggatgaact gctggcggat gatttagcac
    55681 actgccaaac gtcgcagggg acgctgcaga ttgcgccaat gctggcgatg agtgatgccc
    55741 gccgcgcggc gattatccgt cgctggctgg cagggcagaa tgcaccaatg ccttcccgcg
    55801 acgcgctggt gcggatctgg caggaagtgg cgctggcgcg ggaagatgcc tccccctgtt
    55861 tacgcttggg cgcgtttgaa atccgccgct atcagtcgca actgtggtgg attaaatccg
    55921 tcaccgggca aagtgaaacc attgtgccgt ggcagacgtg gctacaaccg ctggaattac
    55981 cggcggggct gggaagcgta cagcttactg cgggaggcga tattcgccct ccgcgtgcag
    56041 acgaagcggt cagcgtgcgt ttcaaatcgg caggattgct gcatattgtc gggcgcaacg
    56101 gcggacgtaa gctgaagaaa atctggcaag agttaggcgt gccgccgtgg ctacgtgaca
    56161 ccacgccact gctgttttat ggcgaaacgc tgattgcggc ggcaggggta tttgtgacgc
    56221 aagaaggtgt ggctgaaggt gagaatggcg taagttttgt ctggcagaaa acgcttagtt
    56281 aagtgaaagc cggataagac gcatcaaacg tcgcatccgg cgaaagtcaa tcaggactcg
    56341 ctcaccacca ccgtaccgat ttccgggtgg ctaaagctgg taattttatc cagacgtagc
    56401 tcacgggttt cgccagcggc ctcgacgacc agatactcca catttttgcg ggagactaaa
    56461 tcgctggctt ttgcctgcaa tttttcgcca tctttcagct caagtgtcag cattaaatga
    56521 tgctggcagg cgagctcaag attatcgtaa tcatcacaat tgattggttg atacgtatca
    56581 ttcattaaca taatcgctca ccagtaagtt tgccgcagcg tatgctgctt tttccctgac
    56641 agcctcagaa agggcgtcgt cggcagccat ttcattcagc actttcaaaa cgcagcccag
    56701 cgcgtccgga acgtatccta agtctccgct ggcgatttcc gcgtaccgct tgcgtattaa
    56761 ctcacaatat ttttccacat gccctcctgt cagcacactg acttaaccgt ggatgcaagt
    56821 ctaagcctac gaagataaac tctgtttcgc aaggtgacta taccacactc atttctgcaa
    56881 tatcagcgcc gcaactgcac gtattccgtt acaatggcct cctgattcga aaggagtttt
    56941 cttatggcgc ttaaagcgac aatttataaa gcgacggtta atgtggccga tctcgaccgc
    57001 aaccagtttc tcgatgcctc tctgacgctg gcgcgccacc cttcagaaac ccaggagcgt
    57061 atgatgctgc gcctgctggc gtggctgaaa tatgctgatg aacgtctgca atttacccgt
    57121 ggtttgtgtg ccgatgatga gccggaagcg tggctgcgta acgatcacct gggcattgat
    57181 ttgtggattg agctggggct gccggatgag cggcggatta agaaagcctg cacccaggcc
    57241 gcagaagtgg cgctgtttac ctataatagt cgggcggcgc aaatctggtg gcagcaaaat
    57301 cagagcaaat gtgtgcagtt tgccaatctt tccgtctggt atctggacga tgaacaactg
    57361 gcgaaagtaa gcgcctttgc cgatcgtacc atgacgctgc aggcaacgat tcaggatggc
    57421 gtgatctggt tatcggacga taagaataat ctggaagtta acttaaccgc ctggcaacaa
    57481 ccttcatgat tgtgatttcc cgacatgttg ctattcccga tggtgagctt gagatcaccg
    57541 ccattcgtgc gcagggcgcg ggcgggcagc atgttaataa gacctcaacg gccattcatc
    57601 tgcgttttga cattcgggcg tccagcctgc cagagtatta caaagagcgt ctgctcgccg
    57661 ccagccatca tttgatcagc agtgatggcg tgattgtcat taaggcacag gaataccgca
    57721 gtcaggaact gaaccgcgaa gccgcgctag cccggctggt ggcagtgatt aaagatttaa
    57781 caacagaaca aaaagcccga cgacccacgc ggcccacccg tgcatcgaaa gagcgcaggc
    57841 tggcatcgaa agcacaaaaa tcaagcgcga aggcgatgcg cggcaaagta cgcagcggtc
    57901 gggaataaaa agaaggaata gatggtgaaa aaagcgatag tgacagcgat ggctgtaatc
    57961 agcctcttta ctctgatggg atgtaataac cgggccgaag tcgatacgct ttctccagca
    58021 caggctgccg aactgaaacc gatgccgcaa agttggcgcg gcgtgctgcc gtgtgctgat
    58081 tgtgaaggaa tcgaaacctc tctgttcctc gaaaaagacg gaacatgggt gatgaatgag
    58141 cgttatctcg gtgctcgtga agaaccttcc tccttcgctt cctacggtac atgggcgcga
    58201 accgctgaca agctggtatt aaccgacagc aaaggtgaaa agtcatatta tcgggcgaaa
    58261 ggcgatgcgc tggagatgct cgatcgtgaa ggcaatccga ttgaatcgca gttcaactat
    58321 acgctggaac cggcacaatc cagtttacct atgacgccga tgaccctgcg aggcatgtat
    58381 ttttatatgg ctgatgcggc gaccttcact gattgcgcga ccggaaaacg tttcatggta
    58441 gcgaataacg cagagctgga gcgtggctac ctggctgcgc gcggtcacag tgaaaaaccg
    58501 gtgttactgt cagtagaagg tcactttacg cttgaggcta atccggatac tggtgcgcca
    58561 accaaagtat tagcgcccga tacggcgggt aaattttacc cgaataagga ttgcagtagt
    58621 ttggggcagt aaacctgctt aaggcagaaa caaacgcaaa acaggccaga aggatatatt
    58681 tcaacatttt gaatttgcac gttttttgta ggccggataa ggcgtttacg ccgcatccgg
    58741 caatggtgct caacgcctga tgcgacgctg gcgcgtctta tcatgcctac aacccccctc
    58801 ataccttaag gcggataagg catttacttt atcaccgggt caaaccaaca aagcgacccg
    58861 ccttgatata aatccctggc ttcaggtgcc caacatactg taactgcgtt tctggcttaa
    58921 acgcagagac atcaccaata cgcatatgca tcagatcggc agggctaatc cagcccgatt
    58981 gcgccagtgt aagtggatgt ccggctttgg caaatgcatc agtgacaaat tccgaacaaa
    59041 accacgactt tttgtctcct tcgcccacac tgcttaactg cgctttcgcc aggccgctga
    59101 cgcactgctg gcgaaaatcc tcggagaact gattcagtga gcacatctgg cgagtcacca
    59161 taaagggaat aaattcgaca atgccgcgat agttataacc gctatctttg attttattgg
    59221 caaacgcggt gatatctgtg gcttgttgcg gggtaagatc cgggactcgt aagacgaaaa
    59281 gcttatcact atgcttcatc gcttttttaa gggaaacaat ctggacgcca gcgcctgtcg
    59341 cttctgcaac gttattatca cccagaaaga ttgcaacgtg actcacagag gaagtgctga
    59401 agacgcggat tccaaatgag gttaccccaa ggcttgagga gaacagcaaa tcgccgggtt
    59461 tgagatcagg tgccgttatt tcttttattg attgttcggt gaaagagctt tgatgctgga
    59521 atttgacagc ccatgttttt gcctcggcat ctactgctgt ggctgatggg gctggctgat
    59581 atcaacggta caagccgaaa gtaaaagaaa gctggggaga agcaggcggc agtacgcctt
    59641 tggtttatcc attttataca atccatgtaa aaaagggccc tgaaattcag gaccctttct
    59701 ggcatcagcc tttaatctgt ttcaccagat attcgacgat gtcaccagtc ttaattaact
    59761 gtttctcgcc gttgcgacga tatttatatt cgatatcgtc gttgtcgagg ttacggtcgc
    59821 ccagcacaat agtgtgcgga ataccgatca gttccatatc agcaaacatc acgcccggac
    59881 gctctttgcg gtcatccagc agcacttcga taccttgtgc acgcagttcg ctgtacagtt
    59941 tctcagcaag ctcttgtacg cggaaggatt tgtgcatgtt catcggcaga atcgccacct
    60001 ggaacggcgc gatagcgtca ggccatacga tgccgcgttc gtcgtagttc tgctcaatcg
    60061 ccgcagctac cacacgcgtt accccgatac cgtagcaacc catcgtcagg atttggttac
    60121 ggccatcttc accctgtacg gaggctttca gtgcttcgga gtacttggta cccagctgga
    60181 agatgtgacc aacttcgata ccacgtttga tcagcagcgt accctggcca tccgggcttg
    60241 gatcgccagc caccacgtta cggatatctg caacttccgg ggtagcgaca tcgcgatccc
    60301 agttgatacc gaagtagtgt ttaccatcga tgttagcacc agcagcgaaa tcactcatcg
    60361 ccgcaacggt acggtcaatc accaccggaa tcggcatgtt taccggaccc agtgaacccg
    60421 gaccggcttt aaccacagca cgaatttctt cttcggtcgc gaaagtcagc gggcttgcaa
    60481 cctgcggcag tttttctgct ttaacttcgt tcagctcgtg atcaccgcgc accagcagcg
    60541 caaccagcgg gaagctgctg ccttcaaccg ctttaaccag cagagtctta accgttttct
    60601 caatcggcag attgaactgt tcaaccagtt ccgcgatggt tttcgcgttc ggcgtatcaa
    60661 ccagcgtcat ttcctgggta gcagcagcgc gcggttcttt cggcgcgata gcttctgcca
    60721 gttcaatgtt cgctgcatag tcagaggtgt cggagaagac cacatcgtct tcaccgctct
    60781 gcgccagcac ctggaattcg tgagaggcgc tgccgccgat agaaccggtg tcggcttgca
    60841 cggcgcggaa atccagcccc atgcggctga agattttgct gtaggccgca tacattgcat
    60901 cgtaggtttc ctgcagggat tcctgagaag tatggaaaga gtaagcatct ttcatcagga
    60961 attcgcggga acgcatgacg ccgaaacgcg gacgcacttc gtcgcggaac ttggtctgga
    61021 tctgatagaa gttcagcggc agctgtttgt aagagctaag ctcgttacga atcaggtcag
    61081 tgataacttc ttcatgagtt gggccgagta cgaacggacg ctcgccacgg tcaacaaaac
    61141 gcagcagttc cggaccgtac tgttcccaac gaccactctc ttgccacaaa tcggctggct
    61201 gaaccaccgg catcgacacc tcgattgcac cggcgttgtt catctcttca cgcacgatgt
    61261 tttcgacttt tttcagaacg cgcacgccgg tcggcagcca ggtatataac ccggaggcca
    61321 gcttgcggat catcccggcg cgcagcatca gctgatggct gatcacctcg gcgtcggcag
    61381 gtgtctcctt gagagtggag agcaggtatt ggctagtacg catgttgtta cggttccagt
    61441 tggaaggtag aacaggctca aggcgagcct gggacaaaaa aagtgattta gtttaccagt
    61501 gcaaaagaaa tgtcaaaaga gaagggcgtg aatttaacgc ggttccagcg caaagacttc
    61561 aaaacctgcg tcggtgacgc gccagcgaac gttaaaatca tgtagccaga cggcataggt
    61621 tttgcccgtt tcctcacctt tatgataggc cgggcgcggg tcctgcgcca gtacttcgcg
    61681 gataaacagc gttaactgcg gataacgctt ctccagcgtc aaaagctgct tttcgacctc
    61741 tgcggtaaaa ctcaccgcca tctctgcagc tggcgcactt tgcgcatagc tggcactggc
    61801 atcgggaagc gattcggcaa aggggagata cggtttgata tccactaccg gcgtaccatc
    61861 gaccagatcc agactgccga gcttcagaat cacgctgtct ttatggcaaa caacctcttt
    61921 cagctctacc agcgacatac caattgggtt agggcggaaa gtagagcgtg ttgcgaaaac
    61981 ccccattctg gcgttaccgc cgaggcgcgg tggacgcaca gtcggacgcc agccgccttc
    62041 catcgtttga tgaaagacga aaaggatcca taaatggctg aacgcttcca ggccgcgaac
    62101 ggcgtcggcc tggttgtagg gagcaatgag atgcagttcg ccgttggcgc tttttaccag
    62161 acctggctgg cgcggaacgg cgaatttttc tttatagggc gagcgaataa cgcctatttg
    62221 ctcgaactgg aaactgctca tttcgccgta atgttaagcg cagagccgat acatacagcc
    62281 tgacgatagc agcctggcgt accgctggtg acttcgcagc tatgcagtaa taccgcattg
    62341 gctttcattt tagaggcgtt gatttgcatc cgcttacgcg cggttggaat gctcggcgga
    62401 gagtcctgat tagaggcctg gcaagagtcg ccactgactt caccgagatc gcggaacggt
    62461 ttgccgacta attcttctgc attggtataa attcggaccg gcgtggcgcg cggcgctttc
    62521 ggttttgcag gctccgcttt cggctggggt gcagtgcttt gaacgggttc gacaggggat
    62581 ctgcttaaca tggaacagcc gcttagcatg agtgctacta aacagatcgg taaagcacgc
    62641 atagtatttc ctcaatgtat gatcaaaacg tcaatattga atcaggagct tgtaaaaatg
    62701 acaagacggg caagtgccca tcctgaatga tattacaaat tgtggaaaca gcctaaaaat
    62761 taccagcctt taacagcgcc gccgttaaac actttgtttg ctgcttcgta aacttcatca
    62821 gactgataag cctggacgaa tttcttcacg ttctcggcgt ctttgttatc ttcacgcgtt
    62881 acgatcaggt ttacgtacgg ggagtcttta tcttcgacaa agataccgtc tttcgctgga
    62941 gtcaggccaa tctggctggc ataggtggta ttgataactg ccagagcgat ttgtgcgtcg
    63001 tccagagatc gaggcagctg cggtgcttcc agctcaacaa ttttcagatt ttttgggttc
    63061 tcaacaacat caagtacggt cggcagcagg ccaacgccat ctttcagttt gatcaagccc
    63121 actttttgca gcagcagcag tgaacgacca aggttagttg gatcgtttgg cacggcaacc
    63181 tgcgaaccat cctgcagttc atccagtgat ttgattttct tggagtaacc agcaatcgga
    63241 taaacaaaag tgttgcctac tgcgaccagt ttgtagccac gatctttcag ttgctgatca
    63301 aggtacggtt tatgctggaa ggcgttggcg tcgatatcgc ctttgctcaa tgcttcgttt
    63361 ggcagaacat agtcgttgaa ggttaccagc tcaacgtcca ggccatattt gtctttcgca
    63421 actttctgcg cgacttctgc aacctgctgt tcggcaccaa caatcacgcc gactttaatg
    63481 tggtttggat ctttttcatc ctgaccgcag cctaccagtg ccagtgatcc aatcagggct
    63541 cccactgccg caaaggtttt gaatttgaac gccatacctt attccttctt caattattta
    63601 tgttgtgttg aacgttactt gcgagtgaca gcccggacga tgcggtcgcc tgcgaactga
    63661 attaaataaa ccagaatgac cagcaatacc agtaccgtat tcatcaccgt cgcgttatag
    63721 ccgatgtagc catactgata gccaatctga cctaaaccac cggcaccgac agcaccaccc
    63781 atcgcggaat aaccgactag ggtaatcagg gtgatagttg ccgcattcac cagacccggc
    63841 aatgcttccg gtaacagcac tttacggacg atctgcatcg gcgtggcacc cattgcacgg
    63901 gaagcttcaa ttaacccggt tgggatctcc agcagagcgt tctcgaccat acgggcaata
    63961 aacggtgctg caccaacggt taacggaaca atcgctgcct gcaaaccaat cgatgtacca
    64021 acaataacgc gggtaaacgg aatcatccat accagcaaga taatgaacgg gatagaacgg
    64081 aaaatgttca caatcgcaga aacggtacga tacagcttcg cgttagcaat aatttgcccc
    64141 ggacgcgtga cataaagcag aacgccaacc ggcagaccaa tcacaaagcc aaaaaaaccg
    64201 gatacgaagg tcattgccag cgtttcccat acgccacgaa ccagcagcca catcatcggc
    64261 tcagacataa cccagtacct ctacttttac atggtgttcc tgcagccagg caatggcggc
    64321 ttgcgtatct tgttgtgtgc cgtgcatttc agtcagcatg atgccgaact taacgccacc
    64381 ggcgtagtcc atctgcgcgc taataatgtt gttgttgacg ttgaaacgac gcgcggtttc
    64441 agaaagcagt ggggcatcga ccgattgacc ggtaaactcc agacgcagca tcggcacgca
    64501 gtcagtaaat ggctccgctt gcagacgttc ctggtaatct tccgggatat ccagatgcag
    64561 ggtcgactga ataaacttct gcgccagcgg cgttttcgga tgcgagaaca cttcacttac
    64621 cgtgtcctgc tcgatcagtt cgccattgct gatgaccgcc acgcaatcac aaatacgctt
    64681 cacaacgtcc atttcgtggg tgatcaacag aatcgtcaaa cccagacggc ggttaatgtc
    64741 tttcagcagt tcgagaatag aacgtgtcgt tgccgggtcc agcgcgctgg tggcttcatc
    64801 acacagcaat actttgggat tgctggctaa tgcacgggca atcgccacac gttgtttctg
    64861 cccaccggaa agattcgacg ggtagctatc atgcttatcg ccaagaccaa ccaatgacag
    64921 caattccgtc acgcgacgtt tgatctcgtc tttcggtgtg ttgtccagct ccagcggcag
    64981 agccacgttg ccaaaaacag tacgcgaaga gagcaggtta aaatgctgga aaatcatacc
    65041 aatctggcgg cgagctttgg tcaactcgga ttctgacagc gtggtcagtt cctggccatc
    65101 gaccagcacg ctaccctcgg ttgggcgctc cagcaggttt acacaacgta taagcgtact
    65161 cttacccgcg cctgaggcac cgataacgcc ataaatttgt ccagctggca catgcaggct
    65221 gacgttgttc aacgcctgga tggtgcgggt gccctggtgg aacactttgg tgatattcga
    65281 aagttttatc attgattatt tattatcgtc attaagttag tcgtggcatc tcgaatgcct
    65341 gaaacgggca acgccgtcaa tgaaatggat gttaaggcat ccagacgtct aaatcaatca
    65401 ggtttatgcg aagagcactt tcttgcaggt cgaaacatgc gatactagcg tcacatgcct
    65461 tattaaggag ctataaaagg tggcaaagag cgtacccgca atttttcttg accgtgatgg
    65521 caccattaat gtcgatcacg gctatgtcca tgagatcgac aactttgaat ttatcgacgg
    65581 tgttattgac gccatgcgcg agctaaaaaa aatgggcttt gtgctggtgg tagtaaccaa
    65641 ccagtctggc attgctcgcg gtaaatttac cgaagcacag tttgaaacgc tgaccgagtg
    65701 gatggactgg tcgctggcgg accgagatgt cgatctggat ggtatctatt attgcccgca
    65761 tcatccgcag ggtagtgttg aagagtttcg ccaggtctgc gactgccgta aaccacatcc
    65821 ggggatgctt ttgtcagcac gcgattattt gcatattgat atggccgctt cttatatggt
    65881 gggcgataaa ttagaagata tgcaggcagc ggctgcggcg aacgtgggaa caaaagtgct
    65941 ggtgcgtacg ggtaaaccta ttacgcctga agcagaaaac gcggcggatt gggtgttaaa
    66001 tagcctggca gacctgccgc aagcgataaa aaagcagcaa aaaccggcat aatgattaaa
    66061 agatgagcga ttgaaataaa aatgcatttt tccacttgtc ttcctgagac gactccctat
    66121 aatgcgcctc catcgacacg gcggatgtga atcacttcac acaaacagcc ggttcggttg
    66181 aagagaaaaa tcctgaaatt cagggttgac tctgaaagag gaaagcgtaa tatacgccac
    66241 ctcgcgacag tgcgctaaag tgcgtcgcaa ctgctcttta acaatttatc agacaatctg
    66301 tgtgggcact cgaagatacg gattcttaac gtcgcaagac ga
//
LOCUS       DADMIB010000006        64636 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.006, whole genome shotgun sequence.
ACCESSION   DADMIB010000006 DADMIB010000000
VERSION     DADMIB010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 64636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 64636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..64636
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.006"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..96
                     /locus_tag="JNZ89_000402"
     CDS             <1..96
                     /locus_tag="JNZ89_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8934377.1"
                     /translation="RLNAVLDYIDAVAATDTSTAPDVIWPELPEA"
     gene            complement(68..505)
                     /locus_tag="JNZ89_000403"
     CDS             complement(68..505)
                     /locus_tag="JNZ89_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8934378.1"
                     /translation="MFYSPSLNIFVNPALKDDYINANSWPDDALAVSDDVYNEFAINT
                     PPDDKIRVAGKNGLPTWALIPPPSYEELIQQAESERQLLLNQANEYMNSKQWPGKAAI
                     GRLKGEELAQYNLWLDYLDALELIDTSSAPDIEWPTPPAVQAR"
     gene            complement(507..893)
                     /locus_tag="JNZ89_000404"
     CDS             complement(507..893)
                     /locus_tag="JNZ89_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001537786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8934379.1"
                     /translation="MPVSHYLCIFLNVGLGELSLAGTASGVIGLNGYVTIPLIISGSR
                     RTLIIQWGQARFGGSGGEDAGYLNDFPFAFPSACYGMIVSHVGHTPSGAGILSASAIT
                     SNQFRGFSSIATAANAVLGRYIAIGV"
     gene            924..1490
                     /locus_tag="JNZ89_000405"
     CDS             924..1490
                     /locus_tag="JNZ89_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016529756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY8934380.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKPDRPG
                     LKKLLRTLSAGDTLVVWKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSIDTSTPMGR
                     FFFHVMGALAEMERELIVERTRAGLAAARAKGRVGGRRPKLTTEQWAQIGRLLEAGES
                     RQRIALIFDVGVSTIYRKFPANESNESP"
     gene            1633..2805
                     /locus_tag="JNZ89_000406"
     CDS             1633..2805
                     /locus_tag="JNZ89_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HAY8934381.1"
                     /translation="MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFP
                     LNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIG
                     AVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAY
                     GCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTG
                     WHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDITTLIRKDGFRFWGSRCLSD
                     DPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLI
                     GGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA"
     gene            2815..3330
                     /locus_tag="JNZ89_000407"
     CDS             2815..3330
                     /locus_tag="JNZ89_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HAY8934382.1"
                     /translation="MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMP
                     GAVDVDLGLDDSALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAV
                     ELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVD
                     LMEAHRNALGL"
     gene            3385..3687
                     /locus_tag="JNZ89_000408"
     CDS             3385..3687
                     /locus_tag="JNZ89_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HAY8934383.1"
                     /translation="MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAI
                     MDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA"
     gene            3702..3821
                     /locus_tag="JNZ89_000409"
     CDS             3702..3821
                     /locus_tag="JNZ89_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY8934384.1"
                     /translation="MADIATIFHWPPSVTDVMPLTEVLEWRDKAIQRSGASHE"
     gene            3814..6891
                     /locus_tag="JNZ89_000410"
     CDS             3814..6891
                     /locus_tag="JNZ89_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8934385.1"
                     /translation="MSDNNLRLQVILNAVDKLTRPFRSAQASSRELAAAVKKSRDAIK
                     QLDQAGSSLDSFRKLQAENQKLGDRLNYARQRANLLSQELGAMGPPSQRQVVALGRQR
                     LAVQRLEERQKKLQQQTALVRAELYRAGISANDGASATARITRETMRYNRQLSEQEAR
                     LRRVGEQQRKMHAARGAYARRLEVRDRIAGAGATTTAAGLAMGAPVMAAVKSYTSMED
                     AMKGVAKQVNGLRDDNGNRTARFYEMQGAIKAASEQLPMENGAVDFAALVEGGARMNV
                     ANPDDSWEDQKRDLLAFASTAAKAATAFELPADELSESLGKIAQLYKIPTRNIEQLGD
                     ALNYLDDNAMSKGADIIDVMQRLGGVADRLDYRKAAALGSTFLTLGAAPEVAASAANA
                     MVRELSIATMQSKSFFEGMNLLKLNPEVIEKQMTKDAMGTIQRVLEKVNALPQDKRLS
                     AMTMLFGKEFGDDAAKLANNLPELQRQLKLTAGNDALGSMQKESDINKDSLSAQWLLV
                     KTGAQNTFSSLGETLRQPLMDILYTVKSVTGALRRWVEANPELTGTLMKVAAVVAAVT
                     VGLGTLAVALAAVLGPLAVIRLGFSVLGIKTLPSVTATVTRTSNALSWLAGAPLALLR
                     RGLASSGNAAGLLTAPLSSLRRTASLTGNVLKTVAGAPVALLRSGLSGLRAVAVMFMN
                     PLAVLRGGLAATGTVLRMLASGPLAMLRVALYAVSGLLGALLSLIGLVVTALAGVALV
                     VWKYWQPITAFLGGVVEGFKAAAGPVSAAFEPLKPVFQWIGDKVQALWGWFTDLLTPV
                     KSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKL
                     PESVTRQQPATVNADGKVMMPSGGFPSWGYGFAGMYDSGGYIPRGQFGIVGENGPEIV
                     NGPANVTSRRNTAALAAVVAGMMGVAATPAELPPLHPLALPAKGGEAMVSRAATVPPV
                     QRIEAPMQIIIQTQPGQSAQDIAREVARQLDERERRLKAKARSNYSDQGGYDA"
     gene            6888..7373
                     /locus_tag="JNZ89_000411"
     CDS             6888..7373
                     /locus_tag="JNZ89_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8934386.1"
                     /translation="MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLG
                     PDNDMLTLSGVLMPEVTGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTK
                     TEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQGTATSALSDISKTVGGLL
                     S"
     gene            7370..8470
                     /locus_tag="JNZ89_000412"
     CDS             7370..8470
                     /locus_tag="JNZ89_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HAY8934387.1"
                     /translation="MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRG
                     FEADQLDLELDDADGKIVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLT
                     IRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGEDLSDKLVEHIDQTN
                     ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTL
                     ADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVL
                     NRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPLDDAE
                     WTITTLTHTVSPDNGFTTSLELEVRIDDFEME"
     gene            8561..8779
                     /locus_tag="JNZ89_000413"
     CDS             8561..8779
                     /locus_tag="JNZ89_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504085.1"
                     /note="in E. coli K-12 this is in prophage P2 remnant;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8934388.1"
                     /translation="MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHET
                     FVRSIATPKESNPVQPHPMKSGQVALSL"
     gene            complement(9014..10699)
                     /locus_tag="JNZ89_000414"
     CDS             complement(9014..10699)
                     /locus_tag="JNZ89_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine antiporter"
                     /protein_id="HAY8934389.1"
                     /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
                     VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
                     ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS
                     LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
                     RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
                     DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV
                     IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI
                     GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM
                     VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA
                     MMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG"
     gene            10969..11346
                     /locus_tag="JNZ89_000415"
     CDS             10969..11346
                     /locus_tag="JNZ89_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934390.1"
                     /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF
                     FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW
                     CALGALCFLFISSLFKPQHRKNQ"
     gene            complement(11376..11633)
                     /gene="grxA"
                     /locus_tag="JNZ89_000416"
     CDS             complement(11376..11633)
                     /gene="grxA"
                     /locus_tag="JNZ89_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 1"
                     /protein_id="HAY8934391.1"
                     /translation="MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT
                     KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA"
     gene            11793..12080
                     /locus_tag="JNZ89_000417"
     CDS             11793..12080
                     /locus_tag="JNZ89_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1418 family protein"
                     /protein_id="HAY8934392.1"
                     /translation="MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV
                     QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH"
     gene            12064..12786
                     /gene="nfsA"
                     /locus_tag="JNZ89_000418"
     CDS             12064..12786
                     /gene="nfsA"
                     /locus_tag="JNZ89_000418"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase NfsA"
                     /protein_id="HAY8934393.1"
                     /translation="MTPTIELICGHRSIRHFTDEPISEAQCEAIINSARATSSSSFLQ
                     CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
                     LGVVDTAMMAQNALTAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWP
                     ADNPDLKPRLPASILVHENSYQPLDKDALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR
                     TIIKESRPFILDYLHKQGWATR"
     gene            12847..13749
                     /gene="rimK"
                     /locus_tag="JNZ89_000419"
     CDS             12847..13749
                     /gene="rimK"
                     /locus_tag="JNZ89_000419"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HAY8934394.1"
                     /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA
                     ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR
                     SMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA
                     ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG
                     AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI
                     DIAGKMIRWIERYATTEYCLKTGG"
     gene            13837..14313
                     /locus_tag="JNZ89_000420"
     CDS             13837..14313
                     /locus_tag="JNZ89_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HAY8934395.1"
                     /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
                     DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
                     QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH"
     gene            14664..15776
                     /gene="potF"
                     /locus_tag="JNZ89_000421"
     CDS             14664..15776
                     /gene="potF"
                     /locus_tag="JNZ89_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HAY8934396.1"
                     /translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD
                     TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
                     KSKLPEWKNLDPELLKLVAKHNPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW
                     DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR
                     PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF
                     FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPG
                     IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK"
     gene            15871..17004
                     /gene="potG"
                     /locus_tag="JNZ89_000422"
     CDS             15871..17004
                     /gene="potG"
                     /locus_tag="JNZ89_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter ATP-binding subunit
                     PotG"
                     /protein_id="HAY8934397.1"
                     /translation="MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYK
                     GEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYAL
                     FPHMTVEQNIAFGLKQDKLPKAEIASRVHEMLGLVHMQEFAKRKPHQLSGGQRQRVAL
                     ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG
                     RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERHEDGLVLYSPGLV
                     HPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHV
                     RLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV"
     gene            17014..17967
                     /gene="potH"
                     /locus_tag="JNZ89_000423"
     CDS             17014..17967
                     /gene="potH"
                     /locus_tag="JNZ89_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotH"
                     /protein_id="HAY8934398.1"
                     /translation="MNTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF
                     LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS
                     LQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
                     NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA
                     LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
                     EFFNNRDWPVAAAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
     gene            17964..18809
                     /gene="potI"
                     /locus_tag="JNZ89_000424"
     CDS             17964..18809
                     /gene="potI"
                     /locus_tag="JNZ89_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HAY8934399.1"
                     /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW
                     AGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF
                     AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS
                     SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV
                     SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ
                     RARHG"
     gene            18869..19357
                     /locus_tag="JNZ89_000425"
     CDS             18869..19357
                     /locus_tag="JNZ89_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjO family protein"
                     /protein_id="HAY8934400.1"
                     /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF
                     NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI
                     TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ
                     LQ"
     gene            19398..20555
                     /gene="rlmC"
                     /locus_tag="JNZ89_000426"
     CDS             19398..20555
                     /gene="rlmC"
                     /locus_tag="JNZ89_000426"
                     /EC_number="2.1.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HAY8934401.1"
                     /translation="MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEW
                     CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK
                     PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQE
                     QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA
                     SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAA
                     ELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC
                     NAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQSEAAGAASDC"
     gene            complement(20699..21430)
                     /gene="artJ"
                     /locus_tag="JNZ89_000427"
     CDS             complement(20699..21430)
                     /gene="artJ"
                     /locus_tag="JNZ89_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8934402.1"
                     /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV
                     GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT
                     PYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
                     IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE
                     KLNNALAAIKADGTYQKINDQWFPQ"
     gene            complement(21721..22389)
                     /gene="artM"
                     /locus_tag="JNZ89_000428"
     CDS             complement(21721..22389)
                     /gene="artM"
                     /locus_tag="JNZ89_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HAY8934403.1"
                     /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL
                     VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS
                     AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK
                     STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF
                     ERRN"
     gene            complement(22389..23105)
                     /gene="artQ"
                     /locus_tag="JNZ89_000429"
     CDS             complement(22389..23105)
                     /gene="artQ"
                     /locus_tag="JNZ89_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HAY8934404.1"
                     /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVA
                     WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS
                     PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH
                     ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL
                     SQYILKRIDLRATRFERRPS"
     gene            complement(23112..23843)
                     /gene="artJ"
                     /locus_tag="JNZ89_000430"
     CDS             complement(23112..23843)
                     /gene="artJ"
                     /locus_tag="JNZ89_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8934405.1"
                     /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV
                     GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT
                     PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYNSYQNAK
                     LDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ
                     KLNTALEKVKKDGTYETIYNKWFQK"
     gene            complement(23861..24589)
                     /gene="artP"
                     /locus_tag="JNZ89_000431"
     CDS             complement(23861..24589)
                     /gene="artP"
                     /locus_tag="JNZ89_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HAY8934406.1"
                     /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL
                     LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN
                     LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
                     QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH
                     IVEQGDASCFTEPQTEAFKNYLSH"
     gene            complement(24807..25322)
                     /locus_tag="JNZ89_000432"
     CDS             complement(24807..25322)
                     /locus_tag="JNZ89_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8934407.1"
                     /translation="MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPGNV
                     AQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPES
                     ARVASASTIPNRDARNIPLRVDLKQGDQSWQDEVLMIQEGQCWVIDDVRYLGGSVHAT
                     AGTLRQSIENR"
     gene            25448..25771
                     /locus_tag="JNZ89_000433"
     CDS             25448..25771
                     /locus_tag="JNZ89_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HAY8934408.1"
                     /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
                     GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA
                     VKTRR"
     gene            25768..26598
                     /locus_tag="JNZ89_000434"
     CDS             25768..26598
                     /locus_tag="JNZ89_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HAY8934409.1"
                     /translation="MRRVFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRI
                     KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI
                     SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP
                     ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL
                     LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD
                     "
     gene            complement(26595..27605)
                     /locus_tag="JNZ89_000435"
     CDS             complement(26595..27605)
                     /locus_tag="JNZ89_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415389.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY8934410.1"
                     /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG
                     AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
                     AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMFSQANPQ
                     TRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLA
                     SQEACDKLPSGRVYNITNGEHRTLCSIVQKLIDELNIDCRIRSVPYPMLDMIARSMER
                     FRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGKL
                     PR"
     gene            complement(27704..29134)
                     /locus_tag="JNZ89_000436"
     CDS             complement(27704..29134)
                     /locus_tag="JNZ89_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8934411.1"
                     /translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL
                     ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP
                     VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
                     DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQ
                     FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL
                     RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT
                     SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD
                     SWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWL
                     LMIPAHLFIFRGMAKQIARLAEQSTD"
     gene            complement(29145..30146)
                     /gene="ltaE"
                     /locus_tag="JNZ89_000437"
     CDS             complement(29145..30146)
                     /gene="ltaE"
                     /locus_tag="JNZ89_000437"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HAY8934412.1"
                     /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA
                     ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP
                     IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
                     LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI
                     RWRKMAGGGMRQSGILAAAGMYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN
                     MLFVRVGEENAAALGEYMKVRNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR"
     gene            complement(30183..31901)
                     /gene="poxB"
                     /locus_tag="JNZ89_000438"
     CDS             complement(30183..31901)
                     /gene="poxB"
                     /locus_tag="JNZ89_000438"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001532507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HAY8934413.1"
                     /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW
                     MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI
                     PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP
                     GDVALKPAPEGATTHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE
                     LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF
                     PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDK
                     ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
                     MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK
                     LPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD
                     EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
                     KTNWLR"
     gene            complement(32034..33002)
                     /gene="hcr"
                     /locus_tag="JNZ89_000439"
     CDS             complement(32034..33002)
                     /gene="hcr"
                     /locus_tag="JNZ89_000439"
                     /EC_number="1.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidoreductase"
                     /protein_id="HAY8934414.1"
                     /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL
                     VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG
                     EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVHTPQDVIFADEW
                     RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG
                     VTRFFKEKFFTPVAKAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG
                     VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA"
     gene            complement(33014..34666)
                     /gene="hcp"
                     /locus_tag="JNZ89_000440"
                     /gene_synonym="priS"
     CDS             complement(33014..34666)
                     /gene="hcp"
                     /locus_tag="JNZ89_000440"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415394.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HAY8934415.1"
                     /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
                     LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC
                     LAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
                     GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL
                     DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
                     AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVSAYDDRIWTRS
                     IVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
                     REKLRHIFLLGGCDGARGERHYFTDFATIVPDDCLILTLACGKYRFNKLEFGDIEGLP
                     RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
                     NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA"
     gene            complement(34810..35709)
                     /gene="lysO"
                     /locus_tag="JNZ89_000441"
     CDS             complement(34810..35709)
                     /gene="lysO"
                     /locus_tag="JNZ89_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415395.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lysine exporter LysO"
                     /protein_id="HAY8934416.1"
                     /translation="MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFM
                     GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI
                     AMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ
                     IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFG
                     PVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMV
                     PAAIVHGFILSLLVPILIAFFSA"
     gene            complement(36203..36898)
                     /gene="aqpZ"
                     /locus_tag="JNZ89_000442"
     CDS             complement(36203..36898)
                     /gene="aqpZ"
                     /locus_tag="JNZ89_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HAY8934417.1"
                     /translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG
                     LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI
                     ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATAKFAPAG
                     FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII
                     GGLIYRTLLEKRD"
     gene            37324..38982
                     /locus_tag="JNZ89_000443"
     CDS             37324..38982
                     /locus_tag="JNZ89_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HAY8934418.1"
                     /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
                     LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP
                     CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR
                     DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH
                     YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA
                     KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE
                     HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV
                     INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
                     RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAI
                     HRSSKPDLAIEVAIEAGRRGVDSVPTLLKKMFSRVLWLARGRAD"
     gene            complement(38979..39935)
                     /locus_tag="JNZ89_000444"
     CDS             complement(38979..39935)
                     /locus_tag="JNZ89_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HAY8934419.1"
                     /translation="MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQ
                     KFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEAL
                     RYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLKLTMMISMDKEGDSTILF
                     RNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVM
                     EAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHY
                     RLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG"
     gene            40086..41201
                     /gene="macA"
                     /locus_tag="JNZ89_000445"
     CDS             40086..41201
                     /gene="macA"
                     /locus_tag="JNZ89_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308991.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide transporter subunit MacA"
                     /protein_id="HAY8934420.1"
                     /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG
                     DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK
                     EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQI
                     GTIDAEIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA
                     DMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY
                     ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR
                     EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ"
     gene            41198..43144
                     /gene="macB"
                     /locus_tag="JNZ89_000446"
     CDS             41198..43144
                     /gene="macB"
                     /locus_tag="JNZ89_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding
                     protein/permease MacB"
                     /protein_id="HAY8934421.1"
                     /translation="MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASG
                     SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT
                     AEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM
                     NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHMVIIVTHDPQVAAQAERVIEIRD
                     GEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM
                     LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD
                     DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ
                     EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL
                     RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD
                     GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
                     DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTAT
                     GILFGWLPARNAARLDPVDALVRE"
     gene            complement(43217..43441)
                     /gene="cspD"
                     /locus_tag="JNZ89_000447"
     CDS             complement(43217..43441)
                     /gene="cspD"
                     /locus_tag="JNZ89_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspD"
                     /protein_id="HAY8934422.1"
                     /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
                     GQSVQFDVHQGPKGNHASVIVPVEVEAAVA"
     gene            43764..44084
                     /gene="clpS"
                     /locus_tag="JNZ89_000448"
     CDS             43764..44084
                     /gene="clpS"
                     /locus_tag="JNZ89_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HAY8934423.1"
                     /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI
                     DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
                     LEKA"
     gene            44115..46391
                     /gene="clpA"
                     /locus_tag="JNZ89_000449"
     CDS             44115..46391
                     /gene="clpA"
                     /locus_tag="JNZ89_000449"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HAY8934424.1"
                     /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
                     EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE
                     VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE
                     EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
                     GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
                     DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
                     RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
                     HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
                     NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
                     SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
                     EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
                     STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV
                     SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
                     ELTYGFQSAQKHKAEAAH"
     gene            complement(46735..46822)
                     /locus_tag="JNZ89_000450"
     tRNA            complement(46735..46822)
                     /locus_tag="JNZ89_000450"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(46786..46788),aa:Ser,seq:gga)
     gene            complement(47076..47294)
                     /gene="infA"
                     /locus_tag="JNZ89_000451"
     CDS             complement(47076..47294)
                     /gene="infA"
                     /locus_tag="JNZ89_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HAY8934425.1"
                     /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
                     IRILTGDKVTVELTPYDLSKGRIVFRSR"
     gene            complement(47579..48283)
                     /gene="aat"
                     /locus_tag="JNZ89_000452"
     CDS             complement(47579..48283)
                     /gene="aat"
                     /locus_tag="JNZ89_000452"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HAY8934426.1"
                     /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR
                     GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC
                     ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS
                     RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR
                     LPNNFWVPRCLFSPQE"
     gene            complement(48325..50046)
                     /gene="cydC"
                     /locus_tag="JNZ89_000453"
     CDS             complement(48325..50046)
                     /gene="cydC"
                     /locus_tag="JNZ89_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HAY8934427.1"
                     /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS
                     ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
                     LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMMVTIGLSFLDF
                     TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA
                     SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP
                     GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVA
                     DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDP
                     QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAESL
                     RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT
                     TESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY
                     YQFKQGL"
     gene            complement(50047..51813)
                     /gene="cydD"
                     /locus_tag="JNZ89_000454"
     CDS             complement(50047..51813)
                     /gene="cydD"
                     /locus_tag="JNZ89_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HAY8934428.1"
                     /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF
                     MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV
                     LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP
                     SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
                     GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL
                     DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH
                     PQCGEVELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL
                     LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA
                     SEHELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL
                     LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR
                     YAELSVAGGPFATLLAHRQEEI"
     gene            complement(51936..52901)
                     /gene="trxB"
                     /locus_tag="JNZ89_000455"
     CDS             complement(51936..52901)
                     /gene="trxB"
                     /locus_tag="JNZ89_000455"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HAY8934429.1"
                     /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
                     TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG
                     EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
                     EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV
                     TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ
                     TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK"
     gene            53446..53940
                     /gene="lrp"
                     /locus_tag="JNZ89_000456"
     CDS             53446..53940
                     /gene="lrp"
                     /locus_tag="JNZ89_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HAY8934430.1"
                     /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
                     CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE
                     IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
                     IKTR"
     gene            54075..58103
                     /gene="ftsK"
                     /locus_tag="JNZ89_000457"
     CDS             54075..58103
                     /gene="ftsK"
                     /locus_tag="JNZ89_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HAY8934431.1"
                     /translation="MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF
                     NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS
                     SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
                     SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE
                     DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDEE
                     EIIYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA
                     APVEPVTQTPPVTSVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQ
                     YNEPLQQPVQPQQPYYAPAAEQPVQQPYYAPAAEQPVQQPYYATAPEQPAQQPYYAPA
                     PEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV
                     VEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSAAAVP
                     PVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKR
                     IRVPTRRELASYGIKLPSQRAAEEKAREARRNQYDSGDQYNDDEIDAMQQDELARQFA
                     QTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDF
                     EFSPMKALLDDGPHEPLFTPIVEPVQQPQQLVAPQQQYQQPQQQVAPQQQYQQPQQPV
                     APQPQYQQPQQQVAPQPQYQQPQQPVAPQQQDTLLHPLLMRNGDSRPLHKPTTPLPSL
                     DLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGV
                     KAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRD
                     NPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDV
                     RFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNL
                     AGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKK
                     VEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILD
                     QAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSD
                     SESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEA
                     QGIVSEQGHNGNREVLAPPPFD"
     gene            58258..58869
                     /gene="lolA"
                     /locus_tag="JNZ89_000458"
     CDS             58258..58869
                     /gene="lolA"
                     /locus_tag="JNZ89_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HAY8934432.1"
                     /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK
                     VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL
                     KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQ
                     FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK"
     gene            58880..60223
                     /locus_tag="JNZ89_000459"
     CDS             58880..60223
                     /locus_tag="JNZ89_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HAY8934433.1"
                     /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
                     IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR
                     NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
                     LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM
                     ADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
                     WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA
                     QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA
                     HDEANAYAAGEVYFPREIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR"
     gene            60314..61606
                     /gene="serS"
                     /locus_tag="JNZ89_000460"
     CDS             60314..61606
                     /gene="serS"
                     /locus_tag="JNZ89_000460"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HAY8934434.1"
                     /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT
                     ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT
                     IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS
                     RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF
                     HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR
                     DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
                     FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG
                     LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
     gene            61845..64289
                     /gene="dmsA"
                     /locus_tag="JNZ89_000461"
                     /pseudo
     CDS             61845..64289
                     /gene="dmsA"
                     /locus_tag="JNZ89_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415414.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit A"
     gene            64300..>64636
                     /locus_tag="JNZ89_000462"
     CDS             64300..>64636
                     /locus_tag="JNZ89_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="oxidoreductase, Fe-S subunit; terminal electron
                     transfer protein for the reduction of DMSO; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit B"
                     /protein_id="HAY8934435.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
                     RYCHMACPYG"
BASE COUNT        15886 a        16222 c        17414 g        15114 t
ORIGIN      
        1 cgacttaacg ccgtgttgga ttacattgac gcggtggcgg caacagatac cagcaccgcg
       61 ccggatgtca tctggcctga actgccggag gcgtaggcca ttcaatatct ggagcactgg
      121 aggtatcaat cagttccagt gcgtccagat aatccagcca caaattatat tgcgccagtt
      181 cctcaccttt cagacgacca atagcggctt taccgggcca ttgtttactg ttcatgtatt
      241 cgttggcctg attaagcaat aattgccttt ctgattctgc ctgttgaata agttcttcat
      301 atgatggtgg aggtattagt gcccatgtgg gtaatccatt ttttcctgca acacgaattt
      361 tgtcatctgg gggcgtattg attgcaaatt cattataaac atcatcactg acagccagag
      421 catcatctgg ccatgaattt gcattaatgt aatcatcctt aagcgcagga ttcacaaaaa
      481 tgtttaaaga tggactataa aacatattaa acccctatag cgatataacg acctaataca
      541 gcatttgcag cagtcgctat gcttgaaaaa ccgcggaact gatttgatgt aattgcagaa
      601 gccgacagga ttcctgcgcc tgaaggtgta tgccccacat gactaactat catcccataa
      661 catgctgacg gaaaggcaaa aggaaaatca ttaagatatc ctgcatcttc accaccagac
      721 ccaccaaatc tcgcctgccc ccactgaata atcagtgttc tccgggaacc tgaaataatt
      781 aacggaatcg ttacataccc attcaggcca atgacacccg atgcagtgcc agccagagat
      841 aattctccca aaccaacgtt taagaaaatg cagagataat ggctaactgg catcatcccc
      901 ggtttttatt caggggattg atcatgctta ttggctatgt acgcgtgtca acaaatgacc
      961 agaacaccga tttgcaacgt aatgcactga actgcgcggg atgtgagcgg atttttgagg
     1021 ataaaatcag tggcactaag cccgacagac cggggcttaa aaaactgctc aggacactat
     1081 cggcaggaga cacgctggtt gtctggaagc tggacagact gggacgcagt atgcggcatc
     1141 ttgttacgct gatagaagag ttgcgccagc gtggtgtgaa tttccgaagc ctgactgaca
     1201 gtattgatac cagtacccca atgggccgtt tcttttttca cgtcatgggg gctctggctg
     1261 aaatggaacg tgaactgata gttgaacgta ccagagcagg gctggctgca gctcgtgcca
     1321 aaggcagagt aggtggacgc cgtcctaagt tgaccaccga acagtgggca cagattggac
     1381 gtttactcga ggccggagaa tcaagacagc gtattgcact gatttttgat gtgggcgttt
     1441 ctaccattta tagaaaattt ccggcgaatg agagcaatga atcgccctga gtcagtatta
     1501 ttttgatttt tcctgtaagc ggacaaatac cgtcattttg tgtgaataac gacacaactg
     1561 cgcttagctg tttgtcaggc acaatcactt caacataggg cgaagcctaa tccaatcagg
     1621 aggttcgcca ctatggctca ggattaccac cacggggtgc gcgttgttga agtcaacgaa
     1681 ggcacccgat ccattaccac ggtgagcacc gccatcgtgg gtatggtctg cacgggcgat
     1741 gatgccgatg caaaaatgtt tcctcttaat aaacctgtgc tgatcactga tgtgctgacc
     1801 gccagcggta aagcgggtga gtctggcacg ctggcccgtt cgctggatgc catcgctgac
     1861 caggcaaaac ccgtgaccgt tgttgtgcgt gtgccgcagg gtgaaacgga agaagaaacc
     1921 acaaccaata tcattggcgc agtgaccgcc gagggtaaaa aaacaggtat gaaagccctg
     1981 ttatctgccc agtcacagct cggcgttaaa ccgcgcattc tcggcgtgcc aggtcacgac
     2041 acgaaggcgg tagctactga gttgctgagc gtggcgcaaa gcctgcgtgg atttgcttac
     2101 ctgtcagcgt atggttgcaa gacggtgcag gaagcaatca cttaccgtga aaacttcagt
     2161 cagcgtgaag gaatgctgat ctggcccgac tttactggct gggacacggt gctgaatgcc
     2221 gaagcaacgg cttatgccac cgcccgtgcg ctcggtctgc gcgctaaaat tgatgagcag
     2281 accggatggc acaaaagcct gtccaacgtg ggcgtgaacg gtgtcaccgg aatttctgct
     2341 gatgtgttct gggatctgca ggacccggca accgatgcag gtctgcttaa ccagaacgat
     2401 atcaccacgc ttatccgcaa agacggtttc cgcttctggg gttcccgctg tctgagcgat
     2461 gatccgctct ttgccttcga aaactacacc cgcacggcgc aggtgctgat ggacacgatg
     2521 gcagaagcgc acatgtgggc ggtggacaaa ccgctgaacc cgtcgctggc ccgcgacatt
     2581 atcgaaggta tccgcgccaa aatgcgtagc ctggtcagtc agggctatct cattggtggt
     2641 gattgctggc tggacgagtc ggtgaacgat aaagacacgc tgaaagccgg gaaactcacc
     2701 atcgattacg actacacgcc agtgccgcca cttgaaaacc tgatgctgcg tcagcgcatc
     2761 accgatcagt acctggtgaa tttctccagc caggtcagcg cgtaagggga caacatggct
     2821 ttaccacgca aattaaaaca cctgaacctg tttaacgacg ggaacaactg gcaggggatc
     2881 gttgagtcgc tgacgctgcc gaaattcacc cgcaaatatg agaagtatcg cggcggcggt
     2941 atgcccggag cggtggatgt ggatctggga ctggatgaca gtgcactgga tacagaattt
     3001 tccattggtg gtactgaact gctgctgttt aagcagatgg gcaaagccac ggtggatggc
     3061 atccagctgc gctttaccgg ctctattcag cgtgatgata ccggggaagt gcaggccgtg
     3121 gagcttgtgg tgcgtggacg tcacaaagaa gtagattccg gcgagtggaa gacgggcgaa
     3181 agcaacacta ccaaagtgac cagtaccaac agctacgcga agctgaccat caatggtgag
     3241 gtgctctatg aagtggacct gatcaacatg gtggaaattg tggacggtgt ggacctgatg
     3301 gaagcgcacc gcaacgccct cggcctctga tgtatctgaa cggcgcggaa tgccgcgcca
     3361 gaacctaatt tacaggacaa caaaatgagc gataagcaga ctgaaaagac cattcaactg
     3421 gatactccca tcatgcgcgg taaaacagaa attaccgaaa ttgtgttgcg taaaccgcag
     3481 tccggtgcgc tgcgcggcac acgcctgcag gccattatgg atatggatgt gaacgcgatg
     3541 atgaccgtga tcccccgcat ctccagtccg gcactgactg cacaggaaat tgcagagatg
     3601 gacccggcag atctcactgc catgtcggtt gaggttgtca cttttttgtt gaagaagtcg
     3661 gtgcttgccg gtttaccgac agcctgacgg ttgacgatct ggtggctgat atcgccacca
     3721 tctttcactg gccgccatcc gttactgacg ttatgccgct gaccgaagtg ctggaatggc
     3781 gggataaagc gattcagaga agcggggcca gccatgagtg acaataacct gcgtctgcag
     3841 gtgattctta atgcggttga caaactcacc cgcccatttc gatccgcgca ggccagttca
     3901 agagaactgg ctgctgctgt caaaaaatcc cgcgatgcaa taaagcagct tgatcaggcc
     3961 gggagcagtc tggacagctt ccgaaagctg caggcagaaa atcagaaatt aggcgacagg
     4021 ctgaactatg cccgccagcg tgcaaatttg ctcagtcagg aactgggagc gatggggccg
     4081 ccttcgcaac gtcaggttgt tgctctgggc cgtcaacggc tggctgttca gcgcctagaa
     4141 gaacgccaga aaaagctgca gcagcagacg gcgcttgtgc gtgcagaact ttatcgtgct
     4201 ggtatttcag ctaatgatgg cgccagtgcg acggcccgca ttacccgtga aacgatgcgt
     4261 tataacaggc agctttctga gcaggaagcg aggttacgac gtgtcgggga gcaacagcga
     4321 aaaatgcacg ccgcccgggg ggcttacgcc aggcgtcttg aggtaaggga tcgtattgca
     4381 ggtgccggag ccaccaccac ggctgcaggg ctggcaatgg gcgcaccagt gatggcggca
     4441 gtaaaaagct ataccagcat ggaagatgcc atgaaaggtg tggcaaagca ggtcaatggt
     4501 ctgcgtgacg ataatggcaa ccgcactgcg cgtttttacg aaatgcaggg tgccatcaag
     4561 gctgccagcg aacagttgcc gatggaaaac ggtgctgtgg acttcgccgc actggttgaa
     4621 ggtggtgcgc gcatgaacgt cgcaaaccct gacgacagct gggaagacca gaaacgtgac
     4681 ctgctggcct tcgccagcac ggcggcaaag gcggcaacag cctttgaact gccagcggat
     4741 gaactgtcag aaagtctggg gaaaatcgcc cagctctaca aaatccctac ccgcaatatt
     4801 gagcagctcg gtgatgcgct gaactatctg gatgataacg ccatgtcgaa aggggcggac
     4861 atcattgatg tcatgcaacg cctgggcggt gtggctgacc gtctggatta tcgtaaagcg
     4921 gcggcgttgg gttccacctt cctgacactc ggcgctgcgc ctgaggttgc agccagtgca
     4981 gcaaacgcga tggtgcgtga attgtccatt gccaccatgc aaagcaagag tttctttgaa
     5041 gggatgaatc tgctgaaact caatccagaa gtgattgaaa agcagatgac gaaggatgcg
     5101 atgggaacta tccagcgggt gctggagaag gtgaatgcgc tgccacagga taagcgcctg
     5161 tctgccatga ccatgttgtt tggtaaagag tttggcgatg acgcagcgaa actggcaaac
     5221 aacctgccgg aacttcagcg ccagttaaaa ctgactgcgg gcaatgatgc gctcggttcc
     5281 atgcagaaag aatccgacat caacaaggat tcactttctg ctcagtggtt gctggtcaaa
     5341 accggagcac agaacacctt cagcagcctg ggggaaacgc tgcgccagcc gctgatggat
     5401 attctgtaca cggtgaaaag cgtcacgggg gcgttgcgtc gctgggtgga agctaacccg
     5461 gaactgacgg gcactctgat gaaagtagcc gctgtggtag ctgccgttac cgtgggcctc
     5521 ggcaccttag cggtggcgct ggctgcagtg ctggggccgc tggcagtcat ccgtctggga
     5581 ttctctgtgc tgggtatcaa aacgttacct tccgttacgg caacagtaac ccgaaccagc
     5641 aacgcgttgt cctggctggc tggcgcacca ctggcactgc tgcgacgcgg gcttgcttca
     5701 tcgggcaacg ctgcaggttt acttactgcg ccgttgtcgt ctttgcgccg cacggcatca
     5761 ctgacgggaa atgtcctgaa aactgtagca ggtgcgccgg ttgcactttt gcggtctgga
     5821 ttatccggtt tacgtgcggt tgctgtgatg tttatgaatc cactggcggt actacgcggc
     5881 ggactggctg ccacaggcac ggtgctgcgt atgctcgcat ccggtccact ggcgatgctg
     5941 cgcgttgccc tgtatgccgt ctctggtctg ttaggtgctc tgctcagtct gataggtctt
     6001 gtggttactg cactggcggg tgtggcgctg gttgtctgga aatactggca gcccatcacc
     6061 gcatttctcg gtggcgtggt ggaaggattc aaagcggcgg caggtcctgt cagtgccgcg
     6121 ttcgaaccgc ttaagcctgt gttccagtgg attggcgaca aagtacaggc gctgtggggc
     6181 tggtttactg atctgctgac gcccgttaag tcgacctctg ccgaactgca gagtgcagcg
     6241 gcaatggggc gacgattcgg ggaggctctg gcggaagggc tgaatatggt catgcatccg
     6301 ctggactccc tgaaatccgg cgtttcctgg ttgctggaga aacttggcat tgtcagtaaa
     6361 gaggccgcaa aggcgaaact gccggaaagc gtgacgcgtc agcaacctgc gacggtgaat
     6421 gcagacggta aagtgatgat gccatcgggt ggttttccgt catggggata tggctttgcg
     6481 gggatgtatg acagcggcgg gtatatcccg cgcgggcagt ttggcatcgt cggtgaaaac
     6541 gggccggaaa ttgttaacgg cccggcaaat gtgaccagcc ggagaaatac agctgcactg
     6601 gctgccgttg ttgccggaat gatgggtgtt gctgctacgc cagcagagct tccaccgttg
     6661 caccctttgg cacttcccgc gaaaggcggt gaagcgatgg tgagtcgtgc agccactgtg
     6721 ccgcccgttc aacggattga ggcaccgatg cagatcatca ttcaaacgca gccaggacaa
     6781 agtgcgcagg atattgcgcg ggaggtggcc cgccagcttg atgaacgtga acgcaggctg
     6841 aaggcaaaag ccaggagtaa ctacagcgat caggggggat acgacgcatg atgatggtgc
     6901 tgggattgta cgtgtttatg ctgcgcaccg tgccgtatca ggagctgcag tatcaacgca
     6961 gctggcgaca tgcggcaaac agccgggtaa accgacgccc gtcaacgcag tttctgggac
     7021 cggacaacga catgctgacg ctttctggtg ttcttatgcc ggaggtaacg ggcggcaggc
     7081 tgtcgttgct ggctctggag cagatggcag aacagggaaa agcatggccc ctgattgaag
     7141 gcagcggcac gatttacggt atgtatgtga ttgagggact gaatcagact aaaacggagt
     7201 ttttccgcga cggtatgccg cgccggattg agttcaccct gtcgctaaaa cgcgtggatg
     7261 aatccctgtc cgatatgttc ggtgatctca gtgcgcaact gaataatctg cagggaacgg
     7321 caacatctgc cttaagcgat atcagtaaaa cggtgggagg gctgctgtcg tgaatttcag
     7381 ctctgaactg cttaacaaag gcaacaaaac tccggcattc agcatcagta ttgaaggcag
     7441 ggatatcacc actgtgctgg acaaccgcct gatggggctg acgctgacgg ataaccgggg
     7501 ctttgaagcg gaccagcttg atctggagct ggacgacgcc gatggaaaaa tcgtgctgcc
     7561 gcgccgtggg gctgtcatta cgctggcgct gggctggaag ggacagccgc ttttcccgaa
     7621 aggggcattc acggtggacg agattgaaca cactggcgca ccggatcgcc tgactatccg
     7681 ggcgcgaagt gctgattttc gtgaaacgct gaatacccgc cgtgaaaagt cgtggcacaa
     7741 gaccaccgtt ggggaagtgg tgaaggaaat agctgcgcgg cacaaactga agatggcatt
     7801 gggtgaagac ttgtcggata aactcgtgga gcatatagac cagactaatg agagtgacgg
     7861 cagttttttg atgcggctgg cgcgccagta cggtgctatt gcgtcggtga aaaatggcaa
     7921 tctgttattc atccggcagg ggcagggtaa aagcgccagc ggtaaaccac taccggtgat
     7981 cactatcaca cgcaaggacg gcgacagtca ccgctttacc ctggcagatc gcggagctta
     8041 cacgggcgtc attgccagct ggttgcatac ccgcgaaccc gcgaagaaag aaagcaccac
     8101 ggtgaagcgt aagcgcagga ctaagaagca gaagaaagag ccggaagcga agcagggcga
     8161 ttacctggtg ggtacggatg aaaacgtgct ggtacttaat cgcacttatg ccaaccggag
     8221 caacgccgaa cgggcagcga aaatgcagtg ggaacgcctg caacgcggcg ttgcatcatt
     8281 ctcgctacaa ctggcggaag ggcgggcaga tctctacaca gaaatgcctg tgaaggtcag
     8341 tggctttaaa cagccgctag atgatgcgga atggaccatt acgactctga cgcatactgt
     8401 cagcccggat aacggtttta cgaccagtct ggagcttgaa gtgaggattg atgatttcga
     8461 aatggaatga ttcttcgcaa tggagaactt ttaagtttgc aaaatggaat aatgcggtat
     8521 cattattgtg aatttagcaa aaatggggag aactcgaaaa atgatgattt gcccactgtg
     8581 tggaagtgcc gcccatactc gcagcagttt tcaggtatct tcattgacca aagagcgtta
     8641 caaccagtgc cagaacatta actgcagcca tacttttgtt acccatgaaa cttttgttcg
     8701 ttcgattgca acgccaaaag agtcaaatcc ggttcagccg catccaatga aatcaggaca
     8761 ggtggcgctc tctctttgac gctgccgcca ttttgtcgcc atcgttaaaa aacagtgctt
     8821 ctaacatcat gattttaaaa ggcataaatt tcagacaaca aaaacccatc aaccttgaac
     8881 cgaaatggcg gggttgatgg gctccacaaa atggggacat caaagaaaag cagtggcact
     8941 aattaagact gatgccctgc ggaaaagttc tgcggttgtg caaaaaaatt tcattttcag
     9001 ggcaacttca gttttatcct aatcctggcc ataccatgac gatgattgtc cctgccagcg
     9061 tcagcaggac gttggcgatt gcgtaggtgc ccgcatagcc cagcgcaggg atgttactgc
     9121 gagctgtatc actgatgatc tccattgccg gcgcgcaggt gcgtgcgccc atcattgcgc
     9181 cgaacaacag tgcgcggttc attcgcaata cataagcacc gaacaagaaa cagataacca
     9241 cgggcacaag actgacaatt aatccggcaa tcaacatctg accgccaatc gcgcccaggc
     9301 cgttattaat accgctaccg gcgctcagac caacgcctgc cataaacacc atcaagccga
     9361 actctttcac catgcttaat gcaccttgcg gaatgtaacc gaaggtcggg tggttagcac
     9421 gcataaagcc cagcataatt ccggcgaata acaacccggc agcgttcccc atgccgaaac
     9481 tgaatgtgct gaactggaag gtgatcatcc cgatcatcag cccaataaca aagaaggcgc
     9541 aaaatgccag caggtcagtg acctggctgt gaatcgagat aaagccgatg cgatcggcga
     9601 tggtttttac gcgacgggca tcaccgctga cttgtaaaac gtcacctttg ttaagcacga
     9661 cgttgtcatc tatcggcatc tcaatctggc tacgaatgac gcggttaagg aagcaaccgt
     9721 gatcggtcaa cttcagttgt gcgagacgtt tacctacagc gttatggttt ttaacgacca
     9781 cttcttcagt gacgatacgc atgtcgagaa ggtcacgatc gaaaacttct ttaccgttac
     9841 ggaagctggg atcgagtcgg gcatgggcgt cgggatagcc taccaacgct atttcatcgc
     9901 ccatttgtag cacggcatca ccgtctggat ttgccagaat cccgttacgt cgaatacgtt
     9961 caatgtagca gccggtttgt cgataaatac ccagttcacg cagatttttg ccgtcggtcc
    10021 aggccaccag ctccgggccg acgcgatagg cgcggatcac cggtaaataa accttacggt
    10081 tggcatcagt gtccaggcca cgttcgcggg cgatttgctg ggcgctggtc tgtaagtcct
    10141 gatgctgcaa tttcggcaag taacgcgcac caacaatcaa actcaccaga ccgattaaat
    10201 aggttaaggc atacccgagg ctcagattat ccagtgccag tgagagctgc ctgctttcca
    10261 tgccggaatg acgcagtgta tcgccagcac cgaccagaac cggtgtcgac gtcatagagc
    10321 ctgctaacat accggccgtc aggccaatat cccagccaaa cagcttacct aaccctaagg
    10381 cgatcaccag cgcactgcca accatcacca gtgctaacat taggtaattt ttcccatcgc
    10441 gaaaaaaaat ggaaaaaaag ttcggtccgg cttcgacccc gacgcagaaa ataaacagca
    10501 taaagccaag attaagcgca tcggtgttaa tgctgaaatg ttgttggcct aataacagcg
    10561 atacgactaa aacgccaatg gaattaccca gttggatcga accaagtcgt aactttccga
    10621 gacatagccc aagcgcgagg accacaaata ataacagaat gtaattccca tttaacaatt
    10681 cggcgacgtt tatattcacg gaggctaact tcttgtttac tagtaagctg ttgaaagaaa
    10741 tggtaattta cgataatgtt ttttaccaga attcagggcg cagattcatt cagcgcacct
    10801 aaacgatagt aaagtaacaa tatattttac tagtgtaatc acattaggta tcaacggcta
    10861 tatgaattgc gttggcctat attagcatgg aatgcgaagc ggctttatct tactgaacgc
    10921 cacactggcg aaaaatgtgt tcgatagacg cagtgtcagg aggaacgagt gaaacataaa
    10981 caacgttggg cgggggcaat ctgctgtttt gtcctcttca ttgtggtgtg cctttttctg
    11041 gcgacgcaca tgaaaggcgc ttttcgggct gccgggcatc ctgaaatcgg cttgctgttt
    11101 ttcattcttc ctggagcagt tgccagtttc ttttcacagc gtagagaagt cctgaaacct
    11161 ctatttggcg caatgctggc ggcaccctgt tcaatgctca ttatgcggct gtttttttca
    11221 ccgacgcgct cattctggca agagctggca tggttactaa gcgcggtgtt ctggtgtgcg
    11281 ctgggggcac tgtgtttctt atttatcagt agtttgttta aaccacagca cagaaaaaat
    11341 cagtaaagcc ctcaacgcga gggcttgtca gacgatcagg cgtccagatt ttctttcacc
    11401 catgcagcaa aatcggtata gccgccgata tgttgctgat cgacaaaaat ctgcggcacg
    11461 gtttctacgg gtttacctgc cttttgttgt agatcttctt tagtgatccc ttccgcacga
    11521 atatctacat actgatactg aaaatcatcg cgttcattgc tcaatttctc agccagatct
    11581 tttgcacgca cacagtaagg gcaacccgaa cgaccaaaaa taacggtttg cattatttct
    11641 ctcctcatag atttatgcct gtaatgatca cgctaaaatg tattcgctga aagtaggttt
    11701 aacctgttgc attaattgct aaaagctata actgttaaac acaatacagt gaaaagtttt
    11761 agactgaagg ctcactttgc agagggaagc gtatgcgcgc gatcggtaaa ttgcctaaag
    11821 gcgtgttgat actggaattt atcggaatga tgctactggc ggtggcgctg ctgtcggtaa
    11881 gcgactccct gtcgctgcct gagccatttt ctcggccaga agtgcagatt ctgatgattt
    11941 ttctcggtgt tttgctcatg cttcccgctg cggtggtggt tattcttcag gtggcaaaac
    12001 gtcttgcccc acagctgatg aaccgtccac cgcaatattc acgttcagaa agagaaaaag
    12061 ataatgacgc caaccattga acttatttgt ggccatcgct ccattcgcca tttcactgat
    12121 gaacccattt ccgaagcgca gtgtgaggcg attattaaca gcgcccgtgc gacgtccagt
    12181 tccagttttt tgcagtgtag tagcattatt cgcattaccg acaaagcatt acgtgaagaa
    12241 ctggtgacgc tgaccggcgg gcaaaaacac gtagcgcaag cggcggagtt ctgggtgttc
    12301 tgtgccgact ttaaccgcca tttacagatc tgtccggatg ctcagctcgg cctggcggaa
    12361 caactgttgc tcggtgtcgt tgatacggca atgatggcgc agaatgcatt aaccgcagcg
    12421 gaatcgctgg gattgggcgg ggtatatatc ggcggcctgc gcaataatat tgaagcggtg
    12481 acgaaactgc tgaaattacc gcagcatgtt ctgccgctgt ttgggctgtg ccttggctgg
    12541 cctgcggata atccggatct caagccgcgt ttaccggcct ccattttggt gcatgaaaac
    12601 agctatcaac cgctggataa agacgcactg gcgcagtatg acgagcaact ggcggaatat
    12661 tacctcaccc gtggcagcaa taatcgccgg gatacctgga gcgatcatat ccgccgaaca
    12721 atcattaaag aaagccgccc atttattctg gattatttgc acaaacaggg ttgggcgacg
    12781 cgctaaaacc gccacgtcga tgtatgatac gcgggctttt gaccaggtct gacagagagg
    12841 tgcagggtga aaattgccat attgtcccgg gatggaacgc tctattcgtg taagcggctg
    12901 cgtgaagccg ctatacagcg cggtcacctg gttgaaattc ttgatccgct ttcttgctac
    12961 atgaacataa atcctgcggc gtcttctatt cactacaaag gccgcaagtt accccatttt
    13021 gacgcagtga tcccgcgtat tggcaccgcc attacctttt atgggacggc ggcactgcgc
    13081 cagttcgaga tgctggggag ctatccgctc aatgagtcgg tcgccattgc ccgggcgcgt
    13141 gacaaattgc gttccatgca actgctggcg cgtcagggca tcgacctgcc tgtcacgggc
    13201 attgcgcatt cgccggatga taccagcgat ttaatcgaca tggtcggtgg tgcgccgctg
    13261 gtggtcaagt tggttgaagg cacgcaggga attggcgtcg tgctggcgga gacgcgtcag
    13321 gcggcggaaa gcgtgattga cgctttccgc ggtctgaacg cgcatattct ggtgcaggaa
    13381 tatatcaaag aggcgcaagg gtgcgatatc cgctgtctgg ttgttggcga tgaagtggtc
    13441 gctgcgattg aacggcgggc gaaagagggc gattttcgtt ccaatttgca tcgtggcggc
    13501 gcggcaagcg tcgccagtat cacaccacag gagcgtgaaa tcgcgataaa agccgcgcga
    13561 acgatggcgc tggacgttgc tggtgtggat attctgcgtg ctaatcgcgg gccgttggtg
    13621 atggaagtga atgcgtcgcc ggggctggaa ggaatagaaa aaaccactgg tatcgacatc
    13681 gcgggtaaaa tgatccgctg gatcgaacgc tacgctacga cagaatattg cctgaaaacg
    13741 ggtggttagt cgcaatcaca ttactgatca tggttttgcc tgcgcttttt gcgtaagctg
    13801 tgccggtctt tttatcgaaa gaggttgtac aaaattatga catcgctggt cgttcctggt
    13861 ctggatacgc tgcgtcaatg gctcgatgac ctggggatga gtttttttga atgtgataac
    13921 tgtcaggctc tgcatctgcc ccatatgcag aatttcgacg gtgtctttga tgccaaaatc
    13981 gatctgatcg ataacacgat cctgttttct gccatggcgg aagtccgacc ttcagccgta
    14041 ttgccgctgg cggcggattt atctgccatc aatgccagtt cgctgaccgt gaaagcattt
    14101 cttgatatgc aggatgataa tctgccaaag ctggtggttt gccagtcttt atccgttatg
    14161 cagggcgtaa cctacgagca gtttgcatgg ttcgtgcgtc agagcgaaga gcagatttcg
    14221 atggtcattc ttgaagctaa tgcccatcaa ctgctgttac cgactgacga tgaagggcaa
    14281 aacaacgtta ccgaaaacta tttcctccac tgataactcc tttcgagcac gcagtcgctg
    14341 gtgcagtgac tgcgcactgc aaaattatct gctgttttta accttttctt aaagattatt
    14401 tcacttctct tgtgccgatt tggctttatc acatagagca aatacgcata acaatttgtt
    14461 aaataccgtt ttttaatccg agctatagtc tcaaaccctg gctaaagtta ttcttgcgat
    14521 gcttttatat agcgagcagt gctggccggg agagagttat cttttcttac accgcgccga
    14581 taaaaaatat gcacgtttat tgcatatctt ttagtatgac aacttttgtt cgtttgttaa
    14641 cgaactttca gaaggaaaga gatatgaccg ccttaaataa aaaatggctt tcgggtctgg
    14701 ttgcgggtgc tctgatggcc gtctctgtcg gcacgctcgc ggctgaacaa aaaacactcc
    14761 acatttataa ctggtctgat tatatcgccc ctgacacggt ggccaatttt gaaaaagaaa
    14821 ccggtattaa agtcgtctac gatgttttcg actctaacga agtactggaa ggcaaattaa
    14881 tggcgggtag caccggcttt gacttggtgg ttccatctgc cagctttctt gaacgccagt
    14941 tgactgcggg agttttccag ccgctggaca aaagcaaatt gccggagtgg aagaatctcg
    15001 acccggagct gctgaagctg gtcgccaaac acaatcccga caataaattt gctatgccct
    15061 atatgtgggc gacgaccggg attggctata acgttgataa agttaaagct gtgctgggcg
    15121 aaaacgcgcc cgtcgatagc tgggacttga tcctcaaacc tgaaaatctg gaaaaactga
    15181 aaagctgcgg tgtctctttc ctggatgcgc cagaagaagt ttttgctacc gtgttgaatt
    15241 atctcggcaa agatcccaac agcactaaag cggatgatta caccggaccg gcaaccgatc
    15301 tgctgttaaa gctgcgcccg aacattcgtt atttccattc atctcaatac attaacgacc
    15361 tggcaaacgg cgatatttgc gtcgctatcg gctgggcagg tgatgtctgg caggcgtcaa
    15421 accgcgcgaa ggaagcgaag aatggagtga atgtctcgtt ctcgattcca aaagaagggg
    15481 cgatggcgtt ctttgatgta ttcgccatgc ctgcggatgc caaaaacaaa gacgaagcct
    15541 atcagttcct gaattacctg ctgcgcccgg atgtagtagc gcatatttcc gaccatgtgt
    15601 tctatgccaa cgccaataaa gcagccacgc cgctggtgag tgcggaagtc cgtgagaacc
    15661 cgggtattta tcctccggcg gacgttcgtg cgaagctatt cactctgaaa gtacaggatc
    15721 cgaaaatcga ccgtgtgcgc acccgcgcgt ggaccaaagt gaagagcgga aaataatccg
    15781 cagccttaga tgccgggcgg gcgcaccaca cccgccggca attcgcacca tcatggtgcg
    15841 cttgcacaca ttcaatgccg gagagcagcc gtgaatgacg ctatccctcg cccgcaggcg
    15901 aaaacccgta aggcgctgac gccgctatta gaaatccgca acctcaccaa atcctacgat
    15961 ggtcagcatg cggtcgatga tgtcagcctg accatctaca aaggtgaaat cttcgcgctg
    16021 ctgggcgctt ccggctgtgg caagtccacg ctgctgcgta tgctggcagg ttttgaacaa
    16081 ccttctgccg ggcagataat gctcgatggc gtcgatttgt cacaggtgcc gccttacctg
    16141 cgccccatca atatgatgtt tcagtcttac gcgctgtttc cgcatatgac cgtggaacag
    16201 aacatcgctt ttggcctgaa acaggacaaa ctaccgaaag cggaaattgc cagtcgggtc
    16261 catgagatgc tcggcctggt gcacatgcag gagttcgcca aacgcaaacc gcatcagctt
    16321 tccggtggtc agcgacagcg tgtggcgctg gcccgaagcc ttgccaagcg cccgaaacta
    16381 ttactgctcg acgagccgat gggcgcgctg gataaaaagc tgcgtgaccg gatgcagctt
    16441 gaagtggtgg atattctgga gcgtgtcggc gtgacctgtg tgatggtcac tcacgatcag
    16501 gaagaggcga tgacgatggc gggacgtatc gccattatga atcgcgggaa atttgtccag
    16561 attggcgagc cagaagagat ctacgaacat ccaaccaccc gctacagtgc tgaatttatc
    16621 ggttcggtta atgtctttga aggtgtactc aaagagcgtc atgaggatgg gcttgtgctt
    16681 tattcgcctg ggctggtgca tccactgaaa gtcgacgcgg atgcctcggt ggtcgataac
    16741 gtgccggtac atgtggcgct gcgcccggaa aaaatcatgc tttgcgaaga gccgcccgcc
    16801 aatggttgta acttcgcggt gggggaggtg atacacattg cctatctcgg cgatctttcg
    16861 gtgtatcacg ttcgtctgaa aagtgggcag atgattagcg cccagctaca aaacgcccat
    16921 cgtcatcgta aagggttacc gacctggggc gacgaagtgc gtttgtgctg ggaagtggac
    16981 agctgtgtgg tgctgacggt ttaaggagca aagatgaata cacttgaacc tgctgcccag
    17041 tcgaaaccgc cgggcggatt taagctgtgg ttgtcgcagc tgcaaatgaa gcatgggcgc
    17101 aaactggtca ttgcgttgcc atatatctgg ttgatcttgc tgtttctgct gccatttctg
    17161 attgtcttta aaataagcct ggcggagatg gcgcgcgcta ttccacctta taccgaactg
    17221 atggagtggg ctgacgggca actgtccatc actcttaatc tcggtaattt tctgcaactg
    17281 accgacgatc cgctctattt cgatgcttat ctccagtcgc tacaggtggc tgcgatttcg
    17341 acattttgct gtttactgat cggctatccg ctggcgtggg cggtggcgca cagtaagcct
    17401 tcgacccgta atattttatt actactggtg atcctgccgt cgtggacctc gtttctgatc
    17461 cgcgtttatg cctggatggg aatattaaaa aacaacggtg tgctgaataa ttttctgctg
    17521 tggctggggg ttatcgatca accgctgacc attcttcata ccaatctggc agtttatatt
    17581 ggcattgttt acgcctacgt gccgtttatg gtgctgccga tttataccgc gttgattcgt
    17641 attgattatt cgctagtgga agcagcgctg gatctcggtg cacgaccgct gaaaacgttc
    17701 tttactgtga tcgtgccgct gactaaaggt gggattattg ccggatcgat gctggtgttt
    17761 atcccggctg tgggcgagtt tgtgatcccg gaactgctcg gtggcccgga cagcatcatg
    17821 atcgggcgcg tgctatggca agagtttttc aataaccgcg actggccggt ggccgcggcg
    17881 gtagcgatca tcatgttgct gctgctaatt gtgccgataa tgtggttcca caaacaccag
    17941 caaaaaagcg tgggagaaca cggatgaata atttaccggt agttcgttcg ccctggcgga
    18001 ttgtgatttt gctgctgggc tttacctttc tctacgcgcc aatgctgatg ctggttatct
    18061 attcgtttaa cagctcgaag ctggtgacgg tgtgggccgg ctggtcaacg cgctggtatg
    18121 gtgagttatt gcgcgatgac gcgatgatga gtgcggttgg tttaagcctg acaattgctg
    18181 cctgtgcggc aacggcggcg gcgatcctcg ggactattgc ggcggtggtg ctggtgcgct
    18241 ttggcaggtt tcgcggatca aatggctttg cctttatgat cacagcgccg ctggtaatgc
    18301 cagatgtcat cacgggcttg tcgctgttgt tattattcgt cgcgcttgct catgccattg
    18361 gctggcctgc ggaccgcggt atgcttacca tctggctggc gcatgtcact ttctgtacgg
    18421 cttatgtggc ggtcgttatt tcgtcgcgtc tgcgggaact ggatcgctcg atagaagaag
    18481 cagcgatgga tctcggtgcg acgccgctga aagtgttttt cgtcattacg ctaccgatga
    18541 tcatgcctgc gatcatttct ggctggttac tggcttttac tttgtcgctt gatgatctgg
    18601 tgatcgccag ctttgtttcc gggccgggag ccaccacgtt accgatgctg gtcttttcca
    18661 gcgtgcggat gggggtgaat ccggaaatca acgcccttgc aacgttaatt ctcggtgcgg
    18721 tcggaattgt cggatttatc gcctggtatc tgatggctcg cgcagaaaaa cagcggatac
    18781 gcgatatcca gcgtgcaaga catggctgaa gacactaaaa tttgccaacc tggctacata
    18841 atgccgcgca tgccgcggca ttgttttcat ggaagacgaa acgttgggat tttttaagaa
    18901 aacatcttca tctcatgctc gcctgaatgt gcctgcgctg gtgcaggtag cggcgctcgc
    18961 cattattatg atccgtggcc tcgacgtgct gatgattttc aatacgctgg gcgtgcgcgg
    19021 tattggcgag ttcattcatc gcagcgtaca aacctggagc ttaacgctgg tatttttaag
    19081 cagtctggtg ctggttttta tcgagatctg gtgtgcgttt tcactggtga aagggcgtcg
    19141 ctgggcgcgc tggctatatc tgctgacaca aatcaccgcc gcaagttact tgtgggcggc
    19201 ttcgctgggg tatggttatc cggagctgtt cagcattccc ggtgaatcaa aacgtgaaat
    19261 cttccatagc ctgatgctgc agaagctgcc ggatatgctc atcctgatgc tgctgttcgt
    19321 tccctcgacc agtcggcggt tcttccagtt gcaataatgt gtataatcgt cgcccctgat
    19381 gatgtgaagg tcaatgtatg cagtgcgcac tttacgacgc gggtcgctgt cgttcctgtc
    19441 agtggataac gcagccgatt ccagagcaac tctccgctaa aaccgccgat cttaaaaatc
    19501 tgctcgccga ttttccggtt gaggaatggt gcgcgccggt gtcaggcccg gaacaagggt
    19561 ttcgtaataa agccaaaatg gtggtgagtg gtagcgttga aaaaccactg ctcggtatgc
    19621 tgcatcgcga tggcacgccg gaagaccttt gtgactgccc gctttatcct gcctcttttg
    19681 cgcccgtttt tgcggcgcta aaaccgttta tcgcccgtgc ggggttaacg ccctacaacg
    19741 tggcgcgtaa gcgtggcgaa ctgaaataca ttctgctgac tgaaagccag agcgatggcg
    19801 gcatgatgct gcgctttgta ctgcgttctg aaaccaaact ggcacaactg cgtaaggcgc
    19861 tgccgtggtt acaggaacaa ctaccgcaac tgaaagttat taccgtcaat attcagccgg
    19921 tacatatggc gattatggaa ggggagacgg agatctacct gactgaacaa caggcgctgg
    19981 cagagcgttt taatgacgta ccgctgtgga tccgtccgca aagtttcttc cagactaatc
    20041 cggcggtcgc cagccagctg tacgctaccg cgcgcgactg ggtacggcag ctgccagtta
    20101 aacatatgtg ggatctgttc tgcggtgtgg ggggctttgg tttacactgc gcgacgcctg
    20161 acatgcagtt aaccgggatc gaaattgcgc cagaggccat tgcctgtgca aagcagtcag
    20221 ccgctgaact gggcttaact cgtttacaat ttcaggcgct ggactccact cagtttgcca
    20281 ctgctcaggg ggaggtgccg gagctggtgc tggttaaccc gccgcgccgc ggcattggta
    20341 aaccgctgtg tgattatctc tcaacgatgg caccgcgttt tatcatctac tccagctgta
    20401 acgcccaaac tatggcgaaa gatatccgcg aactgcctgg gtttcgcatc gaacgggtac
    20461 agctttttga tatgttcccg cacaccgcgc actatgaagt gctgacgctg ctggtgaagc
    20521 aatctgaagc cgcaggtgcg gcttcagatt gctgatcagg tgcgctttgt tcatgccgga
    20581 tgcggcgtgt acgccttatc cggcctacaa aatcatgcta aatcaataca ttgcagagtt
    20641 gatgtgggcc agataagcgc agcgcatcag gcaatcttac ttttgtcatc agtctcaatt
    20701 actgcgggaa ccactggtca ttgattttct gatatgtacc gtcagcttta attgctgcca
    20761 gcgcgttatt cagtttttcc agcagagctt tgttatccgg acgtacagcg atgcccagac
    20821 cggtgccgaa gtattgcgga tcggtcactt tttcagtagc aacgcccagt tgcggattgg
    20881 ttttcagcca ttcgtttacc accgctgtgt caccaaatac cccatcaata cgaccatttt
    20941 tcagatcgat aaaggcattc tgataactgt cataggagac agttttcact tcggggtgct
    21001 gatcctgaat atatttctgg tgcgtggtgc cgttttccat cccaatacgt ttgcctttca
    21061 gatcggcaaa cgttttgtag gtatcttttt tggcaatcac gacggctgag ttttcatagt
    21121 agggcgtggt aaacgatacc tgcttgctac gctcgggcgt gatatccata ccggagatta
    21181 cggcgtcata ttttctgaat ttcagtgacg ggatcaggct gtcgaacgcg tgattagtaa
    21241 aagtacattc tgcctgcatt tgtttgcaca aggcttttgc cagatcgata tcaaagccga
    21301 caatctcatt attagcacct atagattcaa agggtggata ggtggctgaa acgccaaaat
    21361 tgattttctc tgcggcagaa gcaccgaaag taaaggaagc aagtaaagcg gcaagaacta
    21421 actttttcat gatggaactc ccgtctgtca atcttatgat ttttggccgt gtctgcggca
    21481 tgggataaca atgccatcaa gtgaatttat atgcaataaa tatgattaaa taatttaaat
    21541 gaaataaaaa acgacggata acttagtgag ttgtccgtct tcattataag aatttatgca
    21601 ctatgtaggc cggataaggc gtccacgccg catccggcac aggcaccgtg ctgatgtctg
    21661 atgcgacgct ggcgcgtctt atcagaccta caaacccccc ggcgaatgta cgcagctaca
    21721 ttaattccgc cgttcgaatg ccagtgcttt gcgctcgatc agacgcatca tcagcgtcag
    21781 caggccgttg acgaccaggt aaataatccc tgccgcaccg aacaccatta catcgtaggt
    21841 gcgtccgtac aacaactggc tgtatcccat cacttccatc agcgtaatgg tgtaagccag
    21901 agaggtactt ttgaacacca gcaccacttc gttggaataa gaagagagcg agcgtttaaa
    21961 ggcatacggc agcaggatcg ccagcgtatc ttttttgctc attcccaggg cgctacagga
    22021 ctgccactga ccttctggga tcgcacgaat tgcaccgtaa aacagctgcg tggtatacgc
    22081 cgcactgttc agcgataacg caatcagcgc acataaccac ggttctgaca acaaatgcca
    22141 cagtgccgga tactcctgca aagtcggaaa ctggcccggc ccgtaataaa tcaggaagat
    22201 ctgcaccagc agcggcgtac cggtaaacag cgtgatataa ccccgcacca gccacaccag
    22261 caccggcgtt ttcagcgtca ggatgatggt aaaaatcaat gccagaatca gtgccacaat
    22321 cagcgaggca acggttagcg tcaggctggt gtgtagccct ttcatcagtt cgggtaaata
    22381 ctcaaacatt agctgggcct ccgctcaaaa cgtgtcgcgc gcaggtcaat gcgtttgaga
    22441 atgtactgac tgagcagggt gatcaccagg taaatcgccg ccgccacaat ataccaggta
    22501 aatggttcct gggtacgagt agcgatgctt tttgtttgca gcattaaatc attcacacta
    22561 atcaaactga ccagcgcggt atctttcagc agcaccagcc actggttacc gaggccaggc
    22621 agcgcatgac gccacatctg cggcatcacc agacggaaaa agatagccga tttcgacagc
    22681 cccagcgcct gaccagactc ccactgaccc accggcaccg ctttcaacgc gccccgaagc
    22741 gtttgcgagg cataggcggc atacagcagt gacagagcga tgacaccaca aaggaacggg
    22801 ctaacgtcga agttctcaat gtccatctgc actgggatct gcacgaaccc aagattgata
    22861 gtgaagccat ccgaaagcgt cagcagcagc tgcgaggagc caaaatagat aaacagcacc
    22921 accagaattt ctggcaggcc acgcagaatg gttaccagcg ctgaacctgc ccacgcgaca
    22981 ggacgccatt tttccgactc ccataccgca aagaacatcg ccagcgccag cccgacaatc
    23041 aatgcacaaa cggcaaggcc gacggtcatc ccggcggcgc ttgctaaagg aaaaaattca
    23101 ttcatcagga attacttctg gaaccatttg ttgtagatgg tttcgtaagt gccatctttc
    23161 ttcacttttt ccagcgcagt gttgagtttc tgctgcagct cagtgttgcc ctgacgtacc
    23221 gcgatgccga ggccagtgcc gaagtaatct ttatcggtca ctttgtcgcc caccgccgcc
    23281 agtttcgggt tatctttcag ccactcagtg accactgcgg tgtcaccgaa gacgccgtcg
    23341 atacgcccgt tttgcagatc cagttttgcg ttctggtagc tgttatacgg aacggtagtg
    23401 atttccgggt gcttatccat aatgaatttc tggtgtgtcg tcccgttctg tacgccgact
    23461 tttttgcctt tcagctgatc aacactggtg tatttgcctt gctgacccac aaacagggca
    23521 gagttgtcat agtacggggt ggtaaacagc acctgctttt cacgctccgg agtgatatcc
    23581 atgcccgcca tcacggcttc tacgcgacgg aatttcaggc ttgggatcag gctgtcaaac
    23641 gcctggttag agaaagtgca ggttgcatca atctctttac acagcgcttg tgccaggtcg
    23701 acgtcaaaac caacgatctg gttgtttgca tcaatcgatt caaacggagg ataggatgct
    23761 tcggtagcaa aacgaatggt ttcggcagct gtggcggaaa gactaaaacc tgcaattaac
    23821 gcggcaatca gaactttttt cattgttgtt atcccgaatc ttagtgagag agatagtttt
    23881 taaatgcttc ggtttgcggc tcggtaaagc agctcgcgtc gccttgttct acgatatgac
    23941 cattttccat atacaccact cggctggcgg ttttacgcgc cacttcaact tcgtgggtga
    24001 cgatcacctg ggtaatattc gtttctgcca gctcacgaat gatgctgacg atttgtgccg
    24061 taatttccgg gtccagtgcg gcggtcggtt catcgaacag cagtacctgc ggttccatca
    24121 tcaacgcacg ggcaatagca acacgctgct gctgaccacc agaaagatgc agcgggtaac
    24181 gatcgctata aggtttgaga cgcagacgtt ccagcagttt ttctgcacgg gccagcgcct
    24241 gatctttact caaccccagt acacggcagg gcgcttcaat caggttttgc tgcacggtca
    24301 gatgcggcca caggttgtat tgctgaaaca ccatgccaac gttacgacgc aaatcgcgaa
    24361 tcgctttgtc agagggtgtt ttggtgaaat cgaaatggtt gcctgcaatg ttgagcgtac
    24421 cggagcgcgg catctcaagc agattgagta cacgcagcag cgagctttta cccgcgccgc
    24481 tggggccaag taacaccagc gtttcgccct gtgggcaatc cagcgtgata tcgaacagcg
    24541 cctgatgcgc gccgtagaag caattaatgc cgtttaattg aatactcatt gacactcgta
    24601 tactggcagt ctgatagcta ttgaggtcga agatagtacc tttgacagaa taattatgca
    24661 atatttctgc tttaaaagtt aaaagcaaag cgcattattc aataaacata gcacaaaata
    24721 acgggggcgg tggtcggcga gcataaatgt cggcattcct cacgaaatgc cggacaattt
    24781 acggggttta ttggttgatc aaggcgttag cgattctcga tggactgacg gagcgtaccc
    24841 gccgtggcat gaacgctgcc gcctaagtag cgtacatcgt cgatcaccca acactggcct
    24901 tcctgaatca ttaacacttc atcctgccag ctctgatcac cctgttttag atccacacgc
    24961 agaggaatat ttcgcgcatc acgattcggg attgttgagg cactggcaac acgggcgctc
    25021 tctggcaagg ttgtgcgact ggagaatgga tcgttggtca gtagttcccg atggttatta
    25081 tcccgggagg catcgctaag cagtgtcgcc agtttgtcgc tcagataagg gcgcaaggcg
    25141 gtgatgtcgt tgctgcggtg caaaatgcgg tagtcataaa attgctgggc cacgttaccc
    25201 gggcctcctt caacgcaagg accactgcgt gtgccgttat ctttataagc tggagtgact
    25261 gtggtgcagg cactgaggag cagtgcgcag gggataagca ttgtcaattt gctgtagcgc
    25321 ataatgattt ccttataagc gatcgctctg aaagcgttct acgataataa tgatatcctt
    25381 tcaataatag cgtatcagtc tgataatgct tttgagatcg aaggcttagc aaacaaggag
    25441 atcgatcatg caattttcta caaccccaac tctggaaggc cagaccatcg ttgaatattg
    25501 cggtgtggtg accggcgaag cgattttagg tgccaatatt ttccgtgatt tctttgccgg
    25561 tatccgcgat atcgttggcg gacgttccgg tgcgtatgaa aaagaactgc gtaaagcacg
    25621 ggagatcgcc tttgaggaat taggctccca ggcgcgggcg ctgggggccg atgccgtcgt
    25681 cggtattgat atcgactacg aaacggtcgg gcaaaacggc agtatgctga tggttagcgt
    25741 cagcggtacg gcggtgaaaa cgcgtcgatg agaagagtct tctggctggt cgctgccgct
    25801 ctgttattgg cagggtgtgc aggcgaaaaa ggcattgtcg agaaagaggg atatcagctt
    25861 gatacccgac gccaggcgca ggcggcgtat ccgcgcatta aagtgctggt gatccactac
    25921 accgcagatg attttgatag ctcgctggcg acactgaccg ataagcaggt cagctcgcat
    25981 tatctggtcc ctgcggtacc accgcgatac aacggtaaac cgcgcatctg gcaactggtg
    26041 ccggaacaag aactggcctg gcatgcgggg attagcgcct ggcgcggggc aacgcgcctt
    26101 aacgacacct ctattggcat tgagctggaa aaccgtggct ggcaaaaatc ggccggagtg
    26161 aaatattttg ccccgtttga accggcacag attcaggcgc ttattccact ggcgaaagat
    26221 attattgccc gttatcacat caagccggaa aacgtagtgg cacatgcgga tatcgcaccg
    26281 cagcgcaaag acgatccggg gccattattt ccctggcagc aactggcgca gcaggggatt
    26341 ggtgcctggc cggatgcgca gcgggttaac ttttaccttg ccgggcgcgc gccgcacaca
    26401 ccggtagata ccgcgtcatt gctggagctt ttggcgcgct acggttatga cgttaaacct
    26461 gatatgacac cgcgcgagca gcggcgcgtg attatggcat tccagatgca tttccgcccg
    26521 acgttatata acggcgaagc ggatgcagaa actcaggcga ttgccgaagc attgctggag
    26581 aaatacgggc aggattagcg cggcagtttt ccgtggtcgc gtagccaggc ggcagttttc
    26641 tcgatacctt catccagggt gatgaccggc tgataaccta actcttcctg cgcacgcgta
    26701 atatccagcg taaagtcaaa attcaacttg gagacgccgt agtgggtcag cggcggctct
    26761 tttgctgact tgcggaaacg ctccatgctg cgggcgatca tatccagcat cgggtagggg
    26821 acggaacgaa tacgacagtc aatattcaac tcgtcgatca gcttctgcac gatgctgcac
    26881 agtgtgcgat gctcgccgtt ggtgatgttg tacacacgcc cggaaggtag cttatcgcag
    26941 gcttcctggc ttgccagcca cattgcgtgc acggcatttt catagtaggt catatcgacc
    27001 agcgcactgc cgccatgcgg taacagaata ctgccgtagt ggtgcatcat atgcgccaga
    27061 cggggaataa agactttatc gtgcggtccg aacagacttt gtgggcgcag aatagtaaag
    27121 cgcgtttgtg gattcgcctg cgaaaacata ttgatcactt cttcgctggc tgctttgctg
    27181 cgggcaaact cgttggcgaa gcggtgaggg cgaaaatctt ctttaatatc gcgatggtgg
    27241 tgataatcga agtacaggga gggggaagag atatgaataa agttacgcac accccaggcg
    27301 acagcccatt cacccaagcg gcgagtggcg cgaacgttag ccagatcgaa agcctgttgt
    27361 gtcccccagg gtgaggtaaa gctggagcag tgccacagcg tatcaatgcc cgcgagcatc
    27421 actttagctt gtgatgaaac cagctcggtc agatccgccg gaacaaactc tgcgcccatt
    27481 ttttccagca atttgcccat tgcctcgttg cgaccggtcg ctcgcacgct gatgcctttc
    27541 tggcataaaa actctaccgc gtttcgacct aagccgctgg tggcgccggt aaccagtacc
    27601 ttcatatcaa tccactgttg ttgagaaaat aacgtgcgca ttcttccgtg atttccccca
    27661 tgatgcaatg ggaaacatga aagaataacg caggttttgt cgattaatct gtgctttgtt
    27721 ctgccagtct ggcgatttgt tttgccattc cgcgaaaaat aaacagatgc gcggggatca
    27781 tcaataacca gtaaaacagc cccggcatac cgtgcggatg ccagaaagcg cggacatcga
    27841 tagtacgata gtcgccttta tcttccaggc taaaacacag tcgtcccagc cccggcgctt
    27901 tcatgccaaa taacaacgta agttgttttt ccggttcaac gacaatcact ttccagctat
    27961 ctaccgcatc gccagtctgt aaatattcgc gctccgggcg gcctttcgcc agcttatgac
    28021 cgatcgcgcg gtccatcaac gcccgtgtct gccacaaaat attgccaaag aaataacgct
    28081 ctttaccgcc gatttggttc actacctgcc ataaagcagc aaggctggcg gacgttttaa
    28141 cggtaaaccc cgcctgtttg gcaaaataac cgtactccgg tcgccagcgg gcaaaggcct
    28201 gagcgtcgta gccccagtcg ctggagttga ccagtttttc ctcctctttc aacgtgctac
    28261 gtaccgcgtc atcgaaagcg atcagccgtt gtgggatgag tgcacgtagc gcggtatcat
    28321 ccgccagcag atcgtgtttc agcccctgaa tcaacgccct ggcggtggtg ggcggtacgg
    28381 aagtaatcac attgagaaac cacaccgaaa tccagcgggt ggggaggggg atggggatca
    28441 accagcggcg cttgccgctc accgccataa aatgttcaaa ctgttgctga taactgagca
    28501 cctctggtcc ggcggcttcg aagatgcggt gttcgctggc cggatgatct aacaacgcca
    28561 ccagatagtg cagcaagttt tccagcgcga tgggcgtggt gcgtgaacgt acccagcgtg
    28621 gcggcgttaa cactggcagg ttgtagacca tatcgcgcat gacttcgaac gccgctgaac
    28681 ctgcgccaac gataattccg gctcgaagtt cggtcacagg tacattcgct tcacgaagaa
    28741 tgtccgccgt agcctgacga gcacgcagat gatccgactg ctcatgtggc ggggcctgca
    28801 acgaactgag aaagattaat tgcttaactg gtacttcacg tagcgcatcg cggacgttga
    28861 gagccacctg gcgctcctga gcgataaaat cgccgccttc gcccatgctg tgcaccagaa
    28921 aatagacggt atcgatatcc tgcaacaggg ccggaaggtt atccggccag ctgagatcga
    28981 ctttatggca actgacgttt gccagttgca gctttgcaag cctgtcgaca tgacgtgccg
    29041 ccgccaggat ctgatgccct tgctggctga gtgtgcgcac cagatgctga ccaatgtagc
    29101 cactggcacc gagaactaaa atgcgttgcg gcacgtctct ctccttaacg cgccaggaat
    29161 gcgcgccagt gggcggcgac ttccgccagt tgttcgcgcg agacgtcaag atgcgtcacc
    29221 aggcggacaa tcggcgaggc gttaatcagc acgtttctca ctttcatgta ttcgcctaac
    29281 gcggcagcat tttcttcccc gacgcgaaca aacagcatat tagtgtcctg acgcatcaca
    29341 tccgcgcctg cttcacgcag ttgctccgcc atccaggcgg cgttgtcgtg atcttcctgc
    29401 aaccgtgcga cgttattttt cagggcatac atcccggcgg cagccagaat cccggactga
    29461 cgcatcccgc caccggccat tttccgccag cggatggcac gtttaatgta atcacgatta
    29521 ccgacgagta atgaaccgac aggcgtccca agacctttcg acaggcaaat ggtgaacgaa
    29581 tcacaatatt gcgtgatctc tttcagttcg cagccgtaag ccaccacggc attaaagatg
    29641 cgcgcaccgt caacatgcag cgccagattg cgctcgcggg taaattccca tgcttctttc
    29701 aggtattcac gcggcagcac tttgccgttg tgggtgtttt ccagactgag taatttggtg
    29761 cgggcgaaat ggatatcgtc gggtttgatt ttcatcgcca ctttatccag cggtagcgtg
    29821 ccgtcggcag ccgcgtcgat gggttgcggc tgaatgctgc ccagcaccgc tgcgccaccg
    29881 gcttcaaaca gatagttatg cgcggcctga ccgacaatat actcttcgcc acgttcgcag
    29941 tgactgagca gagcgaccag gttggcctga gtgccggtag gcagaaaaat ggcggcttct
    30001 ttaccggaaa gctctgctgc atagtcctgc agagcattaa cggtagggtc gtctccgtaa
    30061 acgtcgtccc caaccggggc ggccatcatc gcttcgagca tggcgcggct cggtcgggta
    30121 acggtatcac tgcgtaaatc aatcatggca tgtccttatt atgacgggaa atgccaccct
    30181 ttttacctta gccagttcgt tttcgccagt tcgatcactt catcgccgcg tccgctgatg
    30241 attgcgcgca acatatacaa gctaaatcct ttggcctgtt cgagtttgat ctgcggtgga
    30301 atagctaact cttctttggc gaccaccaca tccaccagca ccggaccgtc gatggagaag
    30361 gcgcgttgca gggcttcatc aacttcagac gctttttcta cacggatacc cgtaatgccg
    30421 cacgcttcgg caatgcgggc aaagtttgtg tcgtgtagtt cggtgccgtc agtcaaatag
    30481 ccaccagctt tcatctccat cgccacaaag cccagcacgc tgttgttaaa gacgacaatt
    30541 ttcactggca gtttcatctg cactactgag aggaaatcgc ccatcaacat gctaaaaccg
    30601 ccatcgccgc acatggcgac cacctgacgt tctggctctg tcgcctgcgc acccagcgcc
    30661 tgcggcatgg cgttagccat cgaaccgtgg ttaaacgaac ctaacaggcg acgcttgccg
    30721 ttcattttta gataacgtgc cgcccacacc gttggcgtac caacgtcaca ggtgaaaata
    30781 gcgtcatcgg cggcaaaatg actaatttgc tgcgccagat attgcgggtg aatggctttc
    30841 tcgctcggtt tagctaaatc gtccagccct ttgcgggcgt cgcggtaatc ttccagcgct
    30901 ttatccagaa acttgcgatc ggctttttct tccaccaatg gaagcaatgc acgcagagtc
    30961 gacttgatat cgccgaccag tgccatatcc accttgctgt gagcgccgat gctggctggg
    31021 ttgatatcaa tctgaatgat tttggcatcg gtcgggtaga aggcgcggta gggaaattgc
    31081 gtgccgagta gcactaacgt gtcggcgttc atcatggtat ggaaacctga cgagaagccg
    31141 attaacccgg tcattccaac atcatacgga ttatcgtatt cgacatgttc tttaccgcgc
    31201 agggcatgaa caataggcgc tttaattttc ccggcaaact caactaactc tttatgcgcc
    31261 cccgcgcagc cgctgccaca catcagggcg atattgctgg aataacgcag cagttgcgcc
    31321 agtttgcgta actcttcttc ttccggcgtc acgactggtt gtggcgcatg ataccagtgc
    31381 gtggttgccc cttctggcgc aggttttaac gccacgtcgc ctggtaacac gacaaccgaa
    31441 acgccacggt taagcaccgc tttgcgcatg gcaatcgcca gtacttgtgg gatctgctcc
    31501 gggctggaaa ccagctcgca atagtgacta cattcgcgga atagctcttg tgggtgggtt
    31561 tcctggaaat agccgctgcc aatttcgctg gagggaatat gagcggcaat cgccagtacc
    31621 ggaacgtgat tgcggtggca atcaaacagg ccgttgatta agtgcaggtt gccggggccg
    31681 cacgatccgg cgcagaccgc cagttctccg ctaagttgtg cttcagcgcc agcggcaaag
    31741 gccgccactt cttcgtggcg ggtggacatc cactcgatgg tgcccatgcg attaagactg
    31801 tcactaagac cattcagaga gtcgcctgtg actccccaga tgcgtttcac ccctgccgat
    31861 tcgagtgttt tggcgatata agctgcaacc gtttgtttca tggttctcca tctcctgaat
    31921 gtgataacgg taacaagttt agttcatctg acggaggggg aagggatggg agagaaagga
    31981 ggcactaacg gttaaatagc ccgatgaaag gaatatcatc gggcataagg cgattatgcg
    32041 agaaccaaat ccccctgcgg atggcaggag caggccagta cgtaaccttc agcgatttcg
    32101 gcgtcggtca gcgtcattgt actgctcacc gtatattcac cggaaaccac ttttgtctta
    32161 cagcagccgc aaacacccgc acggcaggca gcgacaaccg gaacgttatt gctttccagc
    32221 gcctccagta gcgtggtgcc aaccggggcg taaaattctc gtgccggttg cagtttggtg
    32281 aatttcagac cgctggtcgc cgcttttgct actggggtga agaatttctc tttaaagaaa
    32341 cgcgtcacgc cgagcgcttt cacttcctgc tctacccaat ccatatacgg agccgggccg
    32401 caggtcatca cggtacgtga agctaagtca ggtacacctg ccagcagttc tcgagtgaga
    32461 cgaccagcga taaagccttc ggtaacgtta ttttctgcca ccagcgttac cggatagtta
    32521 cgccactcat cggcgaaaat aacatcctgc ggcgtatgca cgttgtagat cacccgcaca
    32581 tcggcctgtg gacggttctt cgcaagccag cgacgcatcg acataatcgg cgtgacgccg
    32641 cagcctgccg ccagcaacag gaatttatct tctgctttat cgtcgcaggt aaattccccc
    32701 atcgcgtccg aaagccagag ataatcaccg cgttttacat cgcgcgtcag ccactgggag
    32761 ccgacaccgt catcaatccg ccgcacggtc agggtgatat attcactcac gcctggcgtg
    32821 gaggaaatgg tgtaagcacg cagcgtttcc gctgagtttc gcacgctgac cagtgcatat
    32881 tgcccggcgc gatatgggta gtaatcgtgg caaatcaggg aaatcgtcca cacatccggc
    32941 gtttcttgcg taatgtgatg aacctgcatc cgccacgggc attgattcgt tggcatcgtc
    33001 atcgacaaac tccttacgcg ctcaacagtt gcttcatgtc ttcttcaaca gtggtgatag
    33061 aacgcaggcc gaatttctcg ttcagcaccg ccagcaggtc tggtgtcagg aaaccaggtg
    33121 cagtcgggcc ggtgacgata tttttcacgc ccagagaaag cagcgtcagc agaatgacga
    33181 tcgctttctg ttcaaaccag gagagcacca gcgacagcgg cagatcgttc acaccacagc
    33241 ccagtttctc tgccagagtg acagccagaa taatcgctga gtaagcatcg ttacattgac
    33301 ctgcatctac cagacgcggc agaccttcga tatcgccaaa ctcaagtttg ttaaagcgat
    33361 atttaccaca ggcgagggtc aggatcaggc agtcatccgg cacgatggtg gcgaaatcgg
    33421 tgaagtagtg gcgctcgccg cgtgcgccgt cacagccacc aagcaggaag atatgacgca
    33481 gtttttcacg gctcaccaga tcaatcagcg tatcagcagc gccaagcagc gtctggcgac
    33541 caaaacccac ggtgataagg tgcggaattt cgctgtacgg gaagcctgcc atctgttgcg
    33601 cctgggtgat aaccgcagag aaatcatcac cgtccagatg acgcacgcca ggccagccaa
    33661 caatgctgcg ggtccagata cgatcgtcat aagcgcttac ggttgggtcg atgatgcagt
    33721 tcgaggtcat cacgatgggg ccagggaaac gagcgaactc cacttgctga ttctgccagc
    33781 cgctgccgta gttaccgacc agatgcttga atttacgcag ctccgggtag ccatgcgcag
    33841 gcagcatttc gccgtgggtg tagacattaa cgcccgtgcc ttcggtctgt tccagcaggt
    33901 tgtagagatc tttgagatcg tgaccggaaa tcagaatgca tttacccgcc gtcgctttga
    33961 cgttgacctg ggttggcgtc gggtgaccgt atttaccggt ttcgcctgca tccagaatgc
    34021 tcatcacttt gaagttcatc tggccgattt ccattgaaca ctcaagaagc gcgttcatat
    34081 cggcaggcca ggtccccagc cacgccatga ttttatggta ctgggcataa atatcgttgt
    34141 cgtattgacc gagaacatgc gcgtgttcca tataggccgc cgcacctttc aggccataca
    34201 ggcacagcag acgcaggccg agaatgtttt cgccaatcgc cgctttatct ttgttagggg
    34261 taaattctgc tgcctgacgt tgcagctcgc cgagatcatc gctcaccagt tgcaggtcag
    34321 ccatcgggtt atcgacgcgc gcgttggcat ctacagccag gcattgtgct ttcagcgcct
    34381 cgcgcaaggc aatcgcttca cgagcgtagc cgacaatacg cggagaatcg aagttaacgt
    34441 tggtcagggt tgagaaaaag gcacgtggcg cgaagctgtc aacatcgtgg ttgatgatgc
    34501 cgtattcacg cgcttttacc gcccaggcag aaagcccttg cagcgccgcg atgagtaaat
    34561 cctgaaggtc agaagtttcc gccgttttac cacacatccc ctgcgcgtat gagcagccgt
    34621 ttcctgccgg agtacggata gtttgttcac attgcacaca aaacatgatc acacctttta
    34681 aagttatatt taatatacat gtttaaggtt aagacgctta acgcggggat aaaagggatt
    34741 tttcatgcaa ctttaaggga gattgattta gcgcaatttt ggcggcaggg atctaccgcc
    34801 agagaggtat tacgcagaga aaaaggcgat gaggatcggc actaacaggc taagaataaa
    34861 accgtgaaca attgccgccg ggaccatatc cagcccgcca gtacgttgaa gaacgggcag
    34921 ggtgaaatcc attgatgtgg caccgcataa gcccagtgca gtagagcggc tgcggcgaat
    34981 cagcccaggg atcaacataa tagcaatcag ttcacgggcc agatcattaa aaaacgccgc
    35041 gctcccgatt accggaccaa aagattcggt caataaaata ccggaaagag aataccagcc
    35101 gaaaccggag gccattgcca gcgcggtatt gatggggaga tcaagaataa aggcgttaat
    35161 taaaccacca attaatgaac tgacaaccac caccacggcg acaatcattc cccggcgatt
    35221 aaggacaatc tgctttaagg tcatgccatt attgcgcaac tgaataccaa cgaggaaaag
    35281 tagcaaaatt aacgtgtatt cactggcttc ggtcgcgtgt tgtaagaaag ccagtccact
    35341 cagaccaatg gcaaaaccaa tcactactac gccgcacagt tttagcgact ccagcgccat
    35401 cgcaatacgc gacgggagtt tttcttgctg atggtggttg cgccacggca ggcctcgctc
    35461 cagccacatc agggcggcaa tattacacag taaaataacg gtaatactga cggcagaata
    35521 atgcagaatc gccaacaggt tactggcgag gttatcgaga aacgccagac tgatacccat
    35581 aaaaaagaga ataaggtaaa ccatccagct taatagctga ttaataactt ttaacgcagc
    35641 ttgttggcga agcggaatga ggtaacccac aatcagggga accagaatga ttaacagccc
    35701 agaaaacatg aaaacccagt ccttgcaaag atgaagtcga aatgcgcgat gacacactac
    35761 tgaaagcgga aggacgagta aagttgcaat taaaaggaaa tgttatgcat aaggagcagt
    35821 agagtattcg ttttcattta aagatattct tgcgctttaa ttacaaactg caccgatgtt
    35881 ggtggcgtca aaatcgccga ggcgttccct gaaggccggg gcagcccaca tggatgtggg
    35941 ctgagggcgc gttttacagg gatgttacct cgcgcccgac ccggtagccg taagggataa
    36001 gtcgagggca ccgcgcagcg gcgattttgt tcgccagagc ccgggggggc agggggcggc
    36061 ggcgattggc cgccccctgc gcgctccttg cgccagtggc aatatgtggc ttagctcatg
    36121 aaaggagcgc aacaagatga tgaatcaaca tataacaaca tcttaaaaaa agcctgacat
    36181 tacgccaggc cttctgcgtt aattaatcac gcttttccag cagggtccgg taaatcagac
    36241 caccgataat gccgccgaca attggcacca cccagaagaa ccacagttgt tctaatgccc
    36301 agccgccctg gaagatagca accgcggtgc tgcgcgccgg gttaacagaa gtgttagtca
    36361 ccggaatact aattaagtga atcagggtta aggccagacc aatagcgatc ggcgcaaaac
    36421 ctgccggcgc gaatttggcg gttgcgccgt ggatcaccaa caggaaacct gcactcaata
    36481 ccagttcaac taccagcgcg gaaagcatgg aataaccgcc tggtgaatgc tcgccataac
    36541 cgttagaagc aaaaccgctg gctgccgcgt caaaacccgt tttaccactg gcaattaaat
    36601 acagcagcgc cgctgcaaca ataccgccga caacctgggc aattacgtag ccaacgactt
    36661 cttttgccgg aaaacgtccg ccagcccata aaccaatagt gaccgccggg ttaaaatgac
    36721 caccagaaat atgaccaaca gcaaaggcca tcgtcagaac ggtcagaccg aacgccaacg
    36781 ccacgccggc aaaaccaatg cctaattccg ggaagcctgc ggccagtaca gcactaccac
    36841 agccaccaaa aacaagccag aaagtaccaa aacattcagc tgctaatttt ctgaacatat
    36901 ccacctcaat taaaaattga ccctgtgaaa aatatggtcg ttttataggg tcgtcgtaaa
    36961 aaaatgacga cggaaataat gcgcggctat tttaaaaacg aaggcgagtc attcaccaga
    37021 taaataaatc cagtaaattt gatttagggc aacagcgggt tgccccatat agtcatttgt
    37081 ctgattgaca gtgtagtgca cgcaaaagat ttaatccttt aggcgtaata aaaaataata
    37141 tatcatgcta attatttgat tttgttgttt ttgcagactt atcagcaaga gggagtataa
    37201 cgcgattatt cgctcatttt tcagacattt gccatgctta aatgtgatgt catcacgtat
    37261 tagcaaggcc tttcccgtta tactgccagc gtaaaggata agtcacatat ttctggaggg
    37321 gatatgattc ttgagcgcgt tgaaattgtg ggttttcgcg gtatcaaccg tttgtcgttg
    37381 atgctggaac aaaacaacgt cctgattggg gagaacgcgt ggggtaaatc cagcttgctg
    37441 gacgccttaa ccctgctgct atcgccagaa tcagatctct accattttga gcgcgacgat
    37501 ttctggttcc cgccgggaga tatcaacggg cgagaacatc atctgcatat tattttgacc
    37561 ttccgcgaat cgctgccagg ccgacatcgg gttcgccgtt atcggccgct ggaagcgtgc
    37621 tggacgccat gcaccgatgg ctatcaccgt attttttatc gtctggaagg ggagagtgcg
    37681 gaagacggca gcgtgatgac actgcgcagt tttctcgata aagacggaca tccgattgat
    37741 gtcgaggata ttaacgatca ggcacgccat ctggtgcgtt taatgccggt gctgcgcttg
    37801 cgtgatgccc gttttatgcg ccgtattcgt aacggcacgg tgccaaatgt ccctaatgtg
    37861 gaagtcaccg cgcgccagct cgatttcctc gcccgtgagt tatcctcaca tccgcaaaat
    37921 ctctctgatg ggcagattcg tcagggactt tccgcaatgg tacagctgct tgagcattat
    37981 ttctctgagc agggggccgg acaggcgcga tatcgtttaa tgcggcggcg ggccagcaat
    38041 gagcaacgaa gctggcgcta tctggacatc atcaaccgga tgattgaccg acctggaggg
    38101 cgctcgtatc gggttatttt gctcggcctg tttgctactt tattgcaggc aaaaggcaca
    38161 ttgagactgg ataaagacgc gcgtccattg ttgctgatcg aagatccaga aacccgttta
    38221 caccccatta tgctttcagt tgcctggcat ctgttgaatc ttctgccatt gcagcgcatt
    38281 gccaccacca actcgggtga gttgctttcg ttaacgccgg tagagcatgt ttgccgactg
    38341 gtacgtgagt cctcgcgcgt tgccgcctgg cgtctggggc cgagtggctt gagtaccgaa
    38401 gatagccgac gcatatcctt tcacattcgt tttaaccgtc cgtcatcgct gtttgcacgc
    38461 tgctggttgc tggtggaagg ggaaacggaa acctgggtta tcaatgaact ggcgcgtcag
    38521 tgcggacatc attttgatgc cgaagggatc aaggtcattg agtttgccca gtccgggcta
    38581 aagccactgg ttaaatttgc ccgccgaatg gggattgaat ggcatgtact ggtcgatggc
    38641 gatgaagcag ggaagaaata tgccgctacg gtacgcagcc tgttgaataa cgatcgggaa
    38701 gccgaacgag aacatttaac ggcgttaccg gcgctggata tggaacattt tatgtatcgc
    38761 cagggatttt ccgatgtgtt ccaccgcgtg gcgcaaatcc cggaaaatgt accgatgaat
    38821 ctacgcaaaa ttatctcgaa agcgatccat cgctcttcca aacccgatct tgccattgaa
    38881 gtggcaatag aggcaggacg tcgtggtgtg gactccgtac cgacgctgct gaaaaaaatg
    38941 ttctcacgcg tgctgtggct ggcgcgcggt cgcgcggatt aaccgcgaaa catcgtggcc
    39001 atttgtggct gaatagcgtc gagcatctca tagcgccgac ggtattcagc ccgtttttta
    39061 ctggcgattt cggcaatctc ttttcgtgct atctgtgctg gaaggcggta atggcgttca
    39121 gcatcacata cgccgccaac cgattcccag aaagcgttgt aatcagcgtg gatcttgcct
    39181 tctttatcgc gataacgcag gctgcggtaa atatgcgttt cattgctgac ggcaataatc
    39241 tgctctacct gcaaacgttg ggcaaacaga caggccgctt ccatcacgag gcgtttggga
    39301 aatagcccgt ggcaggcttt cgtcgcattc tggatttcct gatgtggaat ttcccatttt
    39361 gcgccttgca gtccgccaat aaacatcgtt cttttcccct gatattcaca cagggtaaac
    39421 gtgatctctg ccagaggaat accttcgctg ttgcgaaaca ggattgtgct gtcaccttct
    39481 ttatccattg agatcatcat ggtcagctta agcgtgaact gctcgccgtt tttgccttcc
    39541 agcttcgcca gttgcagccc gggggtattc aaatataagc tgaattcttc cgccgacata
    39601 catccgcgga gtaacgcata atggtaacgt aacgcctcca gcaattgctt acggctaaga
    39661 ttcgccgcaa ggtaagggcg atgcagacgc acaggcagtc gcggctggcg cgttaacaac
    39721 acattgagat taggccagtg ggaaagttcg ttcatccact caacgcttaa acgcggcata
    39781 atcaacgagc gcagcaaaaa tttctggcga aaactacggc gatgccagaa tttacccggc
    39841 cgacactgtc cacgtgccag actaagaaaa agtgacaggc tgctgagaga ttcagatggc
    39901 gtaaaggtcc gttcagttag ctgcgacata ttcatgaaat cattggttat acatgacgtc
    39961 gatttcacca ttgcgtatct taaccaaaca tcaatagtgt gattactaac gtaaatttta
    40021 gggttttgtt gatatttcgt tgaagttaat gacccggatt ggcatatgga gtattcagaa
    40081 tatttatgaa aaagcggaaa accgtgaaga agcgttacgt tattgcgctg gtgatagtca
    40141 tcgccggact gattacgtta tggagaattc ttaacgcacc cgtgccgact tatcagacac
    40201 tgattgtgcg ccccggtgat ttacagcaaa gcgtgctggc gaccggaaag ctggacgcgc
    40261 tgcgtaaggt tgatgtgggc gcgcaggtca gcggtcagtt gaaaactctg tcggtggcga
    40321 ttggcgataa agtaaaaaaa gaccagcttt taggggttat tgatcctgaa caggctgaaa
    40381 accagattaa ggaggtcgaa gcaacgctga tggagctacg tgcgcagcgg cagcaggcgg
    40441 aagcggagct gaaactggcg cgggtgacgt attcccgtca gcaacgtctg gcacaaacgc
    40501 aggcggtttc acagcaggat ctcgacaccg ccgcgacgga gatggctgtg aaacaggcgc
    40561 aaattggcac cattgacgcg gaaatcaagc gcaatcaggc ttctctcgat acggctaaaa
    40621 ccaatctcga ttacactcgc atcgttgccc cgatggccgg ggaagtcacg caaatcacca
    40681 ctctgcaagg ccagacggtg attgccgcac aacaagcacc gaacattctg acgctggcag
    40741 atatgagcac catgctggta aaagcgcagg tttctgaagc ggatgtaatc cacctgaagc
    40801 cggggcaaaa agcttggttt acggtgcttg gcgatccact gacgcgctac gaggggcaaa
    40861 tcaaggatgt actaccgacg ccggaaaagg ttaacgacgc tattttctat tacgcccgtt
    40921 ttgaagtccc caaccccaat ggtttgctgc ggctggatat gactgcgcaa gtgcatattc
    40981 agctcaccga tgtgaaaaat gtgctgacga tccctctgtc ggcgttaggc gatccggttg
    41041 gcgataatcg ttataaagtc aaattgttgc gtaatggtga aacacgcgag cgtgaagtga
    41101 cgattggcgc acgtaacgat accgatgttg agattgtcaa agggctggaa gcgggcgatg
    41161 aagtggtgat tggtgaggcc aaaccaggag ctgcacaatg acgcctttgc tcgaattaaa
    41221 ggatattcgt cgcagctatc ctgccggtga tgagcaggtt gaggtgctga agggcatcac
    41281 cctcgatatt tatgccggtg agatggtagc gattgttggc gcttcaggtt ccggtaaatc
    41341 gaccctgatg aatattctcg gctgtctgga taaggccacc agcggcacct atcgcgtcgc
    41401 cggtcaggat gttgccacac tggacgccga tgcgctggcg caactgcgcc gcgagcattt
    41461 cggctttatt ttccagcgtt accatttact ttcgcattta accgccgagc agaacgttga
    41521 agtacccgcc gtctatgccg gtcttgagcg gaaacagcgg ctgcttcgcg cccaggagtt
    41581 actgcaacga ctggggctgg aagaccgtac agagtattat ccggcacagc tttcgggtgg
    41641 tcagcaacag cgcgtcagca tcgcgcgggc attgatgaac ggcggtcagg taattcttgc
    41701 cgatgaacca accggcgcac tggacagcca ttctggcgaa gaggtgatgg cgatcctgca
    41761 tcagctgcgc gatcgcgggc atatggtgat tatcgtcacc cacgatccgc aggtcgctgc
    41821 tcaggccgag cgggtgatcg aaattcgcga cggcgaaatt gtgcgcaatc ctcccgccat
    41881 tgaaaaagtg aatgttgctg gcgggacgga gcctgttgtc aacacggtgt ctggctggcg
    41941 gcagtttgtc agcggtttta acgaggcgct gacgatggca tggcgggcgc tggcagcgaa
    42001 taaaatgcgt actttactga ccatgctggg gattattatc ggtattgcgt cggtggtttc
    42061 cattgtcgtg gtgggtgacg ccgccaaaca aatggtgctg gcggatattc gttctattgg
    42121 tacgaatact attgatgtct atcccgggaa agattttggc gatgacgatc cgcaatatca
    42181 gcaggcgctg aagtacgacg acttaatcgc catccaaaaa caaccgtggg tcgcctcagc
    42241 cacacctgcc gtctcgcaaa acctgcgcct gcgttataac aatgttgatg ttgctgccag
    42301 tgccaatggc gtgagcggcg attattttaa tgtctatggc atgaccttca gtgaaggaaa
    42361 cacctttaat caggagcagc tgaacggtcg tgcgcaggtc gtggttctcg acagtaatac
    42421 tcgccgccag cttttccccc ataaagcaga tgtggttggc gaggtgattc tggtcggcaa
    42481 tatgcccgcc agagtcattg gtgtggcgga agaaaaacag tcgatgtttg gtagcagtaa
    42541 agtgctgcgt gtctggctac cttacagcac gatgtccggg cgagttatgg gccagtcgtg
    42601 gctgaactcc attactgtca gggtaaaaga aggatttgac agcgccgagg cggaacagca
    42661 actcacgcgt ttactttcac tgcgccacgg aaagaaggat ttctttacct ggaacatgga
    42721 cggcgtcttg aaaactgttg aaaagaccac acgtacttta caactgtttc tgacgctggt
    42781 ggcggtgatt tcgctggtgg tgggcggtat tggtgtaatg aatattatgc tggtgtcagt
    42841 gaccgagcgg acgcgggaaa ttggcattcg catggctgta ggtgcgcgag caagcgatgt
    42901 tttgcaacag ttcctgatcg aagccgtact ggtttgcttg gtcggtggcg cgttgggaat
    42961 aacgctgtca ctgttaattg ctttcacctt gcagcttttc ttacccggct gggagattgg
    43021 tttttcaccg ttggcactgc tgctggcgtt tctctgctcg acggccaccg ggattttatt
    43081 tggatggtta cccgcacgaa atgcggcacg actggatcca gtagatgctc tggtacgaga
    43141 gtaatttttg agataaaaat gccagccgat cgggctggca ttttgccttt aggatgtaca
    43201 caatgagaca gaagagctat gcgactgccg cttctacttc gacgggcaca ataacactgg
    43261 cgtgattgcc ttttggcccc tggtggacat caaactgaac ggattgtcca gcttttagcg
    43321 ttctgtaacc atccatctga atggtggaat aatgagcgaa aatatcttcg ccgccgcctt
    43381 cagggcagat gaaaccaaac cctttggcat tgttgaacca cttaacagta cccttttcca
    43441 tgcttcgaca tccttcgcaa atcttataca agtaagatgg aataaaccgg ggtcagagag
    43501 ggggctgttc aaaacctcgc caactctaga aatacaattt agagaattag ggcgagccgt
    43561 caagcgtttg acaggggcca gggggcaggt atgaatcaaa aatttgaagc agttaacgct
    43621 attgacagga atgtgacaga tgtcgctgat gccaacgata gatgatagtt atctatcatg
    43681 tggagtagat tggtcaggca aataagctct tgtcagcggc agggcgttct gccgataacc
    43741 gtaaccgaag atgataactg acaatgggta aaacgaacga ctggctggac tttgatcaac
    43801 tggcggaaga aaaagttcgc gacgcgctaa aaccgccatc tatgtataaa gtgatattag
    43861 tcaatgatga ttacactccg atggagtttg ttattgacgt gttacaaaaa ttcttttctt
    43921 atgatgtaga acgtgcaacg caattgatgc tcgctgttca ctaccagggg aaggccattt
    43981 gcggagtctt taccgccgag gttgcagaaa ccaaagtggc gatggtgaac aagtacgcga
    44041 gggagaatga gcatccattg ctgtgtacgc tagaaaaagc ctgaatgcag gcataaaaat
    44101 tgggggaggt gcctatgctc aatcaagaac tggaactcag tttaaatatg gctttcgcca
    44161 gagcgcgcga gcaccgtcat gagtttatga ccgtcgagca cttgttactg gcgctgctca
    44221 gtaacccatc tgcccgggag gcgctggaag cgtgttctgt ggatttggtt gcgctccgtc
    44281 aggaactgga agcctttatt gaacaaacca cacccgttct gcctgccagt gaagaggagc
    44341 gcgacacaca gccgacgctg agttttcagc gtgtactgca acgtgcggtc ttccatgtcc
    44401 agtcctccgg tcgcaatgag gtaaccggtg caaacgttct ggtcgctatc tttagcgaac
    44461 aggagtcgca ggcggcatat ctgttgcgta aacatgaagt cagccgtctc gatgtggtga
    44521 actttatctc tcatggcacg cgtaaagacg agccgacaca gtcttctgat cctggcagcc
    44581 agccaaacag cgaagaacaa gctggtgggg aggaacgtat ggagaatttc acgacgaacc
    44641 tgaatcagct tgcgcgcgtg ggcggaatcg acccactgat tggtcgtgag aaggagctgg
    44701 agcgtgctat tcaggttctc tgccgtcgcc gtaaaaacaa cccgctgctg gtgggggaat
    44761 ctggtgtcgg taaaaccgcg attgcggaag gtcttgcctg gcgaattgtt cagggcgatg
    44821 tgccggaagt gatggctgac tgtacgattt actctctcga tatcggttct ctgttagcgg
    44881 gcactaaata tcgcggcgac tttgaaaaac gttttaaagc gttgctcaag cagctggagc
    44941 aggacactaa cagcatcctg tttattgatg agatccacac cattatcggt gcgggtgcag
    45001 cgtctggtgg ccaggtcgat gcggctaacc tgatcaaacc gttgctctcc agcggtaaaa
    45061 ttcgcgtaat tggttcgaca acctatcagg agttcagcaa cattttcgag aaagaccgtg
    45121 ctctggcgcg tcgcttccag aaaattgata ttactgaacc gtcgatcgaa gaaactgttc
    45181 aaatcatcaa tggcctgaaa ccgaagtatg aagcgcacca cgacgtgcgt tataccgcaa
    45241 aagcggtgcg tgcagcggta gagctggcgg tgaaatacat taacgatcgt catctgccgg
    45301 ataaagccat tgacgttatc gacgaagcgg gcgctcgcgc acgcctgatg ccggtaagca
    45361 aacgcaagaa aaccgttaat gtggcggata ttgagtccgt ggtggcccgt attgcgcgca
    45421 ttccagagaa gagtgtttct cagagtgacc gcgataccct gaaaaacctc ggcgatcgcc
    45481 tgaaaatgct ggtcttcggt caggataaag ccattgaggc gctgactgaa gccattaaga
    45541 tggcgcgtgc aggtttaggt cacgaacata aaccggttgg ttcgttcctg tttgccggcc
    45601 ctaccggggt cgggaaaaca gaggtgacgg tacagctttc gaaagcgttg ggcattgagc
    45661 tgctgcgctt tgatatgtcc gagtatatgg aacgccatac cgtcagccgt ctgattggtg
    45721 cgcctccggg atacgttggt tttgatcagg gaggtttgct gactgatgcg gtcatcaagc
    45781 atccacatgc ggtgctgttg ctggacgaaa tcgagaaagc gcatccggac gtgttcaata
    45841 ttctgttgca ggtgatggac aacggtacgc tgaccgataa caacggacgc aaagcggact
    45901 tccgtaacgt ggtgctggtg atgaccacca acgccggggt acgtgaaact gagcgtaaat
    45961 ccattggtct tatccaccag gataacagca ccgatgcgat ggaagagatc aagaagatct
    46021 ttacaccgga attccgtaac cgtctcgaca acattatctg gttcgatcat ctgtcaactg
    46081 acgtgatcca tcaggtggtg gataaattca tcgtcgagtt gcaggttcag ctggatcaga
    46141 aaggtgtttc tctggaagtg agccaggaag cgcgtaactg gctggccgag aaaggttacg
    46201 accgggcaat gggcgcacgt ccgatggcgc gtgtcatcca ggacaacctg aaaaaaccgc
    46261 tcgccaacga actgctgttt ggttcgctgg tggacggcgg tcaggtcacc gtcgcgctgg
    46321 ataaagagaa aaatgagctg acttacggat tccagagtgc acaaaagcac aaggcggaag
    46381 cagcgcatta atctgattgt taggtaggtt ggtcaagtcc gtaatctcga aagaggttac
    46441 ggactttttg tttatggggt ggaggaggtt cagacccttt ttttaatgat gatggtaagt
    46501 tgttgataat tagtgctgcg ggaaggtaag gataaaaaag ggtgctgcag gagaatggga
    46561 tggttttgct ttatttacaa cgggctaaac gtgtagtatt tgagttcact gccgtacagg
    46621 cagcttagaa attcacaggt aacatactcc acccgcccac catgttcact gccgtacaga
    46681 cagataaaat gcgaaaaaaa agctcgcact ttcgtacgag ctcttcttta aatatggcgg
    46741 tgaggggggg attcgaaccc ccgatacgtt gccgtataca cactttccag gcgtgctcct
    46801 tcagccactc ggacacctca ccaaattgtt ttgctaccaa acctcatggg tggcaacggg
    46861 gcgctactat agggagttgg agtaaaacgg tcaagaagaa ttttaatgat aattattgtt
    46921 tgctcatact gtaaacaagt tgtgcagtat atctacatcg agacaagtta cggacttata
    46981 cttccaaagt acttcataca tatcacaaaa taaaaaggcc ggttaaaccg accttttact
    47041 cgttctttct cttcgcccat caggcggtaa aacaatcagc gactacggaa gacaatgcgg
    47101 cctttgctca ggtcgtacgg ggtcagttca acagtcactt tgtcgcccgt caggatgcgg
    47161 atgtagtttt tgcgcatttt accggagatg tgtgcagtaa ccacgtgacc gttttctaac
    47221 tctacgcgga acatggtatt aggcaacgtt tcaagaacgg taccttgcat ttcaatattg
    47281 tcttctttgg ccatctaatc ctctggggta tcactaccgt aatttgaacc ggcaagataa
    47341 tgccgaagtt ctgtaaataa gtaaagattt gcgcgctaaa tcgcaacaaa caggttcggc
    47401 acattactcc gaaaacacac ggctaagccg caccaaaagc gcaacgtata agggagcggt
    47461 gagataaacg atgggcgtta cctgacgcga aaaattcctt atcggcagcg gggtaatgag
    47521 cgtaaccaac tctgcgaccg caattataac actctgggga gaaatgtgcc gaaaacattc
    47581 attcttgtgg tgaaaacaag catcgtggta cccagaaatt attcggcaat cgtccgaggc
    47641 gcatttgatt gagataatta aggtaatccc ggcggggaat ttcgcaggca ccaagcgatg
    47701 ctgtgtgatc gttaaggacc tggcagtcga taagcttacc gccatgaccg ataaattcct
    47761 cacagaatac cagaagcgcc gttttagacg cattttccat ccggctgaac atggactcgc
    47821 cacaaaatag cgttccctgg gccacgccgt acataccgcc gacaagctca tcttcacgcc
    47881 agacttcaat ggagtgggca tggccgagtt cgtgaaggcg atggtaggct tcgaccacgc
    47941 cacgcgtgat ccaggttcct tcttcgcgat cgctggcaca gccttcaatg acctgaccaa
    48001 aagcgtaatt catcgtgaca cgatagggcg agcgtttatg aaatcgcttc atactacggc
    48061 tgatatgcag tgattctggc catagcaccg cgcggggatc gggcgaccac cagaggatgg
    48121 ggtcgcctgg agaaaaccac ggaaaaatac cacgctggta agccattaac aggcgcgcag
    48181 ggctaagatc gcccccaagt gccagcaggc cgttaggctc acgtaatgcg ccttccgggg
    48241 aagggaaggc tattgaatgg cgagaaagct gaaccaggcg catgaccgca aaactccacg
    48301 caagtcggat cgttcaataa tagcttacaa accctgcttg aactggtaat aacgcccctg
    48361 tctggcaagc agctctgcgt gagtaccttg ctcaataatt tgcccgttgt ccatcactat
    48421 tatttgttgg aaacgagaga gtccgcgaag tcgatgggtg accattaaca ccgttttctc
    48481 acgcatcatt tctgcaagca attcaaggat ctggctttcg gttgtggcat ctaagccttc
    48541 ggtaggttca tccagcaaca ccagtggcgc atcatgtaac agcgcacggg cgatagccag
    48601 acggcgcagt tcaccaccgg agagctggcg tccgccttca cctaaccaac tgttgagacc
    48661 tgcatcctcg agcagcttct ccagaccaac gcgacgcaag ctctccgcca gagcctcatc
    48721 actactgcca ggcgaggcga gtaacagatt atcacgcagc gtggcgctaa acagatgcac
    48781 tcgctgagga acaacgctga tggtctgtcg tagagccgct tcattcaggc tggctatggg
    48841 gctatcgtta agcaaaatct cgccctgttg cgggtcccaa gcgcgggtca gcagttgtaa
    48901 cagtgttgat ttgccgcatc cggttcgccc gagaatcgca atatgttccc cggcgtttac
    48961 ctgaagagaa atccctttaa gtgcctgttg ggattgctcc ggataagtga actgaacatc
    49021 ccgtaatgtc agcgaaacgc gatcggcaac acgagtttgg gtatcaggga aggtgacttc
    49081 cggtttttga tccgttaaat cagtgatccg aacggcagag gcaatgactt gccccagatg
    49141 ctgaaatgca cccgttactg gtgccagtgc ttcaaacgcg gctaacgcgc agaagacaaa
    49201 cagggcaatt aacgcgccgg gttgagcatt gccgccaacg ccgccagacg ccatccacag
    49261 catcaggatc accgctaacg cgccaatgag cagcattatc gcttgcgaca atgcggtcag
    49321 ttcagattga cggcgttgcg cttccagcca ttgaatttct gtattctcta gttgcgtgcg
    49381 ataacgatcg ctggcaccaa aaatggtcag ctcagcttgc ccttgcagcc aggccgtcag
    49441 ttgttggcga tactgtccgc gaagatgagt cagattttgc ccggtgcttt ttcccgcacg
    49501 ataaaacagc ggtggcatca ggaaaagcgt cagtaacata atgccgccca gcgtaaaggc
    49561 gagggtgaaa tcaaggaaac ttaacccgat tgtcaccatc ataatcacca caaaagcgcc
    49621 caccagcggc gagataacgc gcaggtaaag atgatcgagc gtatcaacat ccgccaccac
    49681 gcgattgagc aattcgccct gacgatagcg cgccagtccg gcaggggaga ggggcaacaa
    49741 tttgctgaag gtgtaaatgc gcagatgctg caacacgcgg aaagtcgcgt cgtgacttac
    49801 cagacgttca aaataacgcc cggcagtacg ggtgattgcg gcaccacgca cgcccgcagc
    49861 gggtagcata tagttgaagc tgtacagtcc ggcaaccccc gcaaccgctg aggccgagag
    49921 gaaccagccg gaaagtgtca acagtccgat actggcgagc agcgtcacaa ttgccagcac
    49981 aataccaaga cttaacatcc atttatgacg tttatacagt gctagatagg gtagcaaagc
    50041 gcgcatttaa atctcctcct gacgatgggc cagtaatgtg gcgaatgggc caccagccac
    50101 acttaattcc gcgtaacgtc cttgctcaat aatccggcca tcctgcataa cccaaatgac
    50161 atcccagtca gcaagatctt ctaactggtg ggtgaccatt aacgttgtct ggcgcagaga
    50221 ggcggcattc agcgcctcca ttacgcgctg ttcactgtga gcatcaaggc tggcagcggg
    50281 ttcatccaac agtaatagcg aacagggatt tagtaacgca cgggccaccg ccacgcgctg
    50341 cgcctgcccc acggaaaggc gggcagcctg gtcgccaaca ggcgtatcaa cgccttgtgg
    50401 caggagcggt agaaactcgc tgacccaggc gttatccagc gctgcttgta attcatgttc
    50461 gctggcatca ggtcgcgcca gtagtacgtt atcccgtaat gttgctgccg gtaattgtgg
    50521 attttgccca acccaggaga gatgtttacg ccatgattct ggtgataaat cgcgtaattc
    50581 tatcccgttg attcgtagcg atccctgata tgagagaaaa ccagaaagcg cgttcaacag
    50641 tgaactttta cctgaaccgc tgcgaccaac caacacggca cgttggcctg ctggcaaagt
    50701 aaagttcagc ggtccggcca gcgttttacc ttccggcgac gtgataaaca gatcctcggc
    50761 ctcaatggtc accggatcgg tcgatgctaa ttccacctcg ccacactgcg gatgggcgag
    50821 cggggtttcc ataaacgttt tcagactgtc agctgcacca acagcctggg ctttagcatg
    50881 ataaaacgta ccgagatcgc gtaatggctg gaaaaactct ggcgcaagga tcagggccag
    50941 aaaacccgca gccagcgtca cgccagtatc gtagtgacca aaatccagct cgccaagata
    51001 ggaaaaacca aagtagaccg ccaccagagc aattgacagc gaggtaaaaa attcgagaat
    51061 gccggaggat aaaaatgcca gccgtagcac ttccattgtc cgttggcgga aatcttccga
    51121 agcagaacga atactttcaa tttcagcttc accacgacca aaaatacgca atgtttccat
    51181 gccgcgcagg cgatcgagga aatgcccact taagcgagca agagcgagaa agttacgtcg
    51241 gttagcatcg gcagccccca ttccaaccag cgccataaac aacggaatta acggtgcagt
    51301 gcccagcaga atgagcgccg cagcccagtt tgaggggaag attgccacca caatcagcaa
    51361 cggcaccgac actgccagcg ccatttgcgg caggtagcgt gcatagtaat catgcatatc
    51421 gtcaatttgc tcgagtacca gcgtcgccca gctccccgca ggtttaccct gaatccacgc
    51481 tggccctgct tgttgcagac ggtcgagaac ctgccggcgg atggcaaagc ggatatgctg
    51541 cccggcgtga taacccaccc gttcgcgtaa ccagaccacc catgcgcgca gtacaaaggt
    51601 cagaaccagt aacgtaaagg gaagcagcag ggcttcacgg ggaatattct ccataatcat
    51661 atgttgcaga attcgcgcca tgaaccaggc ctgggcaatg atcaatatgc cgctcacaaa
    51721 gcccagcaga cgagaaatat tcagccaacg ttgggagatg acgctttgct gttttaacca
    51781 gcgggttaac tctttttgac gagatttatt cattgcacgc ttagcaggtg agttatcaga
    51841 attatttgca gagcaatgtt acaacgggga aaaaataaag gcgacccata gtcgcaaggt
    51901 gtcgccttct ttacttttgt tactgatttg taaaattatt ttgcgtcagc taaaccatcg
    51961 aggtagcgtt ccgcatcaag tgctgccatg cagcctgtac cggccgaagt aatggcctga
    52021 cgataaatat gatccatcac gtcacccgcg gcaaagacgc caggaatgct ggtctgggtg
    52081 gcattaccat gaatacccga ctgtactttg atgtagccgt tttccagttc cagctgccct
    52141 tcgaaaatgg cagtattcgg gctgtgaccg atagcaacaa acagaccggc aacgtcgagt
    52201 gattcgatgt tatcgctgtt ttgcgtatcg cgcagacgaa cgccagtgac acccatttga
    52261 tcgccggtca cttcttccag cgtccggttg gtgtgcagaa tgatgttgcc gttctccact
    52321 ttatccatca gacgcttaat gaggattttt tccgcgcgga aaccgtcacg gcggtgaatc
    52381 agatgtactt ccgaagcgat gttagacaga tacaacgcct cttcaaccgc ggtattgccg
    52441 ccgccgatga ccgcaacttt ctggttgcga tagaagaaac cgtcgcaggt tgcacaagca
    52501 gaaaccccac ggcctttaaa ggcttcttca gagggcaggc cgagatagcg tgcagaagct
    52561 ccggtggcaa taatcagcgc gtcgcaagtg tattcgccgt tatcgccatt cagacggaac
    52621 ggacggtttt gcagatccac cttgttgata tgatcaaaaa tgatttcagt ttcaaatttg
    52681 gtggcatgtt cgtgcatgcg ctccattaat aacggaccgg tcagatcgtt tggatcgcca
    52741 ggccagtttt ccacttctgt ggtggtggtc agttggccgc ctttttccat gccggtaatc
    52801 agcacaggtt gcaggttggc gcgcgccgca tagacagcag cggtgtatcc cgccgggcct
    52861 gaacccagga taagcagttt actgtgtttg gtcgtgccca tgagatcccc atagttgttg
    52921 gcagacaatg ggcaggattg tagggaattt actgacgtaa aaaaagagta tgacgatttt
    52981 gttaacaatt tgtgcaatcg gcagcatcga taagcaggtc aaattctccc gtcattatca
    53041 cctctgctac ttaaatttcc cgctttataa gctgattaaa tgatgaataa acgcccctgt
    53101 taatgaatat ctggcatgtt gtactaaaaa tcgatgtttt gctttgacaa tcccctggtg
    53161 ttttgcgaaa acattcgagg aagaaaaaaa acagtattct tatatgcgca taaccatgca
    53221 tgtaaatacc atgtttaccg tgctagtgaa atctacgtat ggcgtggaca gacgccattc
    53281 gtgatgtcga tagctgccac aaggcaacgg tcttctcacc gtagacccag gcattgcgcg
    53341 ccgtgaatct tcatgatttc ggtctatcgt gacgggtagc gactctgaac agtgatgttt
    53401 cagggtcaga caggagtagg gaaggaatac agagagacaa taataatggt agatagcaag
    53461 aagcgccctg gcaaagatct cgaccgtatc gatcgtaaca ttcttaatga gttgcaaaag
    53521 gatgggcgta tttctaacgt cgagctttct aaacgtgtgg gactttcccc aacgccgtgc
    53581 cttgagcgtg tgcgtcggct ggaaagacaa gggtttattc agggctatac ggcgctgctt
    53641 aacccccatt atctggatgc atcacttctg gtattcgttg agattactct gaatcgtggc
    53701 gcaccggatg tgtttgaaca attcaatacc gctgtacaaa aacttgaaga aattcaggag
    53761 tgtcatttag tatctggtga tttcgactac ctgttgaaaa cacgcgtgcc ggatatgtca
    53821 gcttaccgta agttgctggg ggaaaccctg ctgcgtctgc ctggcgtcaa tgacacacgg
    53881 acatacgttg ttatggaaga agtcaagcag agtaatcgtc tggttattaa gacgcgctaa
    53941 cacggaacag gtgcaaaatc ggcgtatttt gattacactc ctgttaatcc atacagcaac
    54001 agtactgggg taacctggta ctgttgtccg ttttagcatc gggcaggaaa agcctgtaac
    54061 ctggagagcc tttcttgagc caggaataca ctgaagacaa agaagtcaca ttgacaaagt
    54121 taagtagcgg ccgtcgcctt ctggaagcgt tgctgatcct tattgtcctg tttgccgtct
    54181 ggttgatggc tgccttacta agctttaacc cttcggaccc cagctggtcg caaacggcct
    54241 ggcatgaacc tatccataat ttaggtggga tgcccggtgc gtggctggca gatacgctgt
    54301 tctttatttt tggcgtgatg gcttacacca ttcccgtcat tattgtcggc ggttgttggt
    54361 ttgcctggcg tcatcagtcc agtgacgaat acattgatta ttttgccgtt tcgttacgca
    54421 tcattggcgt tttggcgctc atccttacct cctgtggtct ggcggcaatc aacgctgacg
    54481 atatctggta ttttgcctcc ggtggcgtca ttggcagctt actaagcact acgttacaac
    54541 cactgctaca cagtagcggg ggaactattg cgctgctctg cgtttgggct gcgggcctga
    54601 cgctgttcac cggttggtca tgggtgacca ttgctgaaaa actcggcggc tggattttaa
    54661 acattctcac cttcgccagt aatcgtaccc gtcgcgatga tacctgggtc gatgaagatg
    54721 aatatgaaga tgacgaagag tatgaagatg aaaaccacgg caaacagcat gaatcacgcc
    54781 gtgcccgtat tcttcgcggc gcgctagcgc gtcgtaaacg gttggcggaa aaattcatta
    54841 atccgatggg gcggcaaaca gacgctgcgt tgttctccgg taagcggatg gatgatgaag
    54901 aagagattat ctacactgca cgcggtgtgg ctgccgaccc ggacgacgtc ctattttcgg
    54961 gcaatcgtgc aacgcagcca gaatatgacg aatacgatcc attattaaac ggtgcgccaa
    55021 ttaccgaacc tgttgctgta gcagctgctg ctaccacggc gacacaaagc tgggctgcgc
    55081 cggttgaacc tgtgacccag acgccgcctg ttacttctgt tgatgttcca ccttcgcaac
    55141 ctacagtagc ctggcagcct gtaccgggtc cacaaacggg agagccggtt attgctcctg
    55201 caccggaagg ttacccacag cagccacaat atgcgcagcc tgcagtgcaa tataatgagc
    55261 cgctgcaaca acctgtacag ccacagcagc cgtattatgc gcctgcagct gaacaacctg
    55321 tgcaacaacc ttactacgct cctgcggcgg aacaacctgt tcagcaaccg tattacgcaa
    55381 ctgcgccgga acagcctgcg caacagccgt attatgcccc tgcgccagaa caaccggtgg
    55441 caggtaacgc ctggcaagcc gaagagcagc aatccacttt tgctccacag tctacatacc
    55501 agactgagca aacttatcag cagccagccg ctcaggagcc gttgtaccaa cagccgcaac
    55561 ccgttgaaca gcagcctgtt gtggagcctg aacccgttgt agaagagaca aaacccgcgc
    55621 gtccgccgct ttactatttt gaagaagtgg aagagaagcg agcccgtgaa cgtgaacaac
    55681 ttgcggcctg gtatcaaccg attccagaac cggttaaaga accagaaccg atcaaatctt
    55741 cgttgaaagc gccttctgct gcagcagtac ctccagtaga agccgctgcc gctgtttctc
    55801 cgctggcatc tggcgtgaaa aaagcgacac tggcgacggg ggctgccgca accgttgccg
    55861 cgccagtctt cagtctggca aatagcggtg gaccgcgtcc gcaagtcaaa gagggaattg
    55921 gcccgcagtt gccacgaccg aaacgtattc gcgtgccaac tcgtcgtgaa ctggcgtctt
    55981 acggtattaa gctgccctca cagcgtgcgg cggaagagaa agcccgtgaa gcccggcgca
    56041 atcagtatga ttctggcgat cagtataacg atgatgaaat cgatgcgatg cagcaggatg
    56101 aactggcacg tcagttcgcc cagacacagc agcaacgcta tggcgaacag tatcaacatg
    56161 atgtgcccgt aaacgcagaa gatgcagatg ctgcggcaga ggctgaactg gctcgtcagt
    56221 ttgcgcaaac tcaacaacaa cgttattccg gcgaacaacc ggctggggcg aatccgttct
    56281 cgctggatga ttttgaattt tcgccaatga aagcgttgct ggatgatggt ccacacgaac
    56341 cgttgtttac gccaattgtt gaacctgtac agcagccgca acaactggtt gcaccgcagc
    56401 agcagtatca gcagccacaa cagcaggttg cgccacagca gcaatatcag cagccgcaac
    56461 agccggttgc gccgcagccg cagtatcagc agccacaaca gcaggttgcg ccgcagccac
    56521 aatatcagca gccgcaacaa ccggttgcac cgcagcagca ggataccctg cttcatccgc
    56581 tgttgatgcg taatggcgac agccgtccgt tgcataaacc gacgacgccg ctgccttctc
    56641 tggatttgct gacaccgccg ccgagcgaag tggagccggt agataccttt gcgcttgaac
    56701 aaatggctcg cctggtggaa gcgcgtctgg ctgatttccg tattaaagcc gatgtcgtca
    56761 attactctcc ggggccggtt atcactcgct ttgaacttaa cctggctcct ggcgtaaaag
    56821 cggcgcgcat ttctaacttg tcacgggacc ttgcccgttc actttcgacg gtggcggtgc
    56881 gtgtcgttga agttattcct ggcaaaccct atgtaggtct ggagttacca aataaaaaac
    56941 gacaaaccgt ttatctgcgc gaagttttgg ataacgccaa attccgcgat aatccgtcgc
    57001 cattaaccgt ggtgctgggt aaagatatcg ccggtgagcc ggtggttgcc gatctggcga
    57061 aaatgccgca cttgttggtt gcggggacta ccggttccgg taaatctgtc ggtgtgaacg
    57121 cgatgatcct gagcatgctt tataaagcac agccagaaga tgtgcgtttc atcatgatcg
    57181 acccgaaaat gctggagctt tcggtttatg aaggcattcc gcatctgtta acggaagtcg
    57241 ttactgatat gaaagatgcc gccaacgcgc tgcgctggtg tgttaacgag atggagcgtc
    57301 gttataaact gatgtctgcg ctgggtgtgc gtaatctggc gggttataac gaaaaaattg
    57361 ctgaagccga tcgcatgatg cgtccgattc cagacccgta ctggaagccg ggtgacagta
    57421 tggatgccca gcatccggtg ctgaaaaaag aaccatacat tgtggtgttg gttgacgaat
    57481 ttgccgacct gatgatgacg gtaggtaaaa aagtggaaga gctgatagca cgtctggcgc
    57541 aaaaagcccg tgccgcgggt atccacctcg tactggcaac tcagcgtcca tcggttgatg
    57601 ttattactgg tctgattaaa gcgaatattc cgacccgtat cgcctttacc gtatccagta
    57661 agattgactc acgtaccatt cttgatcagg ctggcgcgga atcactgctg gggatggggg
    57721 atatgctcta ctctgggccg aactccacgt tgccggtacg tgtccatggt gcttttgttc
    57781 gcgatcagga agttcatgcc gtggtgcagg actggaaagc gcgtggtcgc ccacagtatg
    57841 ttgatggcat cacttccgac agtgaaagcg aaggtggcgc gggcggtttc gatggcgctg
    57901 aagaactgga tccgttgttc gatcaggcgg tgcagtttgt cactgaaaaa cgcaaagcgt
    57961 caatttctgg cgtacagcgt cagttccgca ttggttataa ccgtgcagcg cgtattatcg
    58021 aacagatgga agcgcagggg attgtcagcg aacaggggca caacggtaat cgtgaagtgc
    58081 tggccccacc gccgtttgac taattaatgc attgccggat aaggcgcggt agcgtcgcat
    58141 ccggcactct atcaactgaa aattcagtat tttctttttt cctcaagctg attattagcc
    58201 tggaatagag agtagaggga actcccgatc gggagtgacg taatttgagg aataatgatg
    58261 aaaaaaattg ccatcacctg tgcattactc tcaagcttag tagcaagcag cgtttgggct
    58321 gatgccgcaa gcgatctgaa aagccgcctg gataaagtca gcagcttcca cgccagcttc
    58381 acacaaaaag tgactgacgg tagcggtgcg gcggtgcagg aaggtcaggg cgatctgtgg
    58441 gtgaaacgtc caaacttatt caactggcat atgacacaac ctgatgaaag cattctggtt
    58501 tctgacggta aaacactgtg gttctataac ccgttcgttg agcaagctac ggcaacttgg
    58561 ctgaaagatg ccaccggtaa tacgccgttt atgctgattg cccgcaacca gtccagcgac
    58621 tggcagcagt acaatatcaa acagaatggc gatgactttg tcctgacgcc gaaagccagc
    58681 aatggcaatc tgaagcagtt caccattaac gtgggacgtg atggcacaat ccatcagttt
    58741 agcgcggtgg agcaggacga tcagcgcagc agttatcaac tgaaatccca gcaaaatggg
    58801 gctgtggatg cagcgaaatt taccttcacc ccgccgcaag gcgtcacggt agatgatcaa
    58861 cgtaagtaga ggcacctgag tgagcaatct gtcgctcgat ttttcggata atacttttca
    58921 acctctggcc gcgcgtatgc ggccagaaaa tttagcacag tatatcggcc agcaacattt
    58981 gctggctgcg gggaagccgt tgccgcgcgc tatcgaagcc gggcatctgc attctatgat
    59041 cctctggggg ccaccgggta ccggcaaaac aactctcgct gaagtgattg cccgctatgc
    59101 gaacgctgat gtggaacgta tttctgccgt cacctctggc gtgaaagaga ttcgcgaggc
    59161 gatcgagcgc gcccggcaaa accgcaatgc aggtcgccgc actattcttt ttgttgacga
    59221 agttcaccgt ttcaacaaaa gccagcagga tgcatttctg ccacatattg aagacggcac
    59281 catcactttt attggcgcaa ccactgaaaa cccgtcgttt gagcttaatt cggcactgct
    59341 ttcccgtgcc cgtgtctatc tgttgaaatc cctgagtaca gaggatattg agcaagtact
    59401 aactcaggcg atggaagaca aaacccgtgg ctatggtggt caggatattg ttctgccaga
    59461 tgaaacacga cgcgccattg ctgaactggt gaatggcgac gcgcgccggg cgttaaatac
    59521 gctggaaatg atggcggata tggccgaagt cgatgatagc ggtaagcggg tcctgaagcc
    59581 tgaattactg accgaaatcg caggtgaacg tagtgcccgc tttgataaca aaggtgatcg
    59641 cttttacgat ctcatttccg cactgcataa atcggtacgt ggtagcgcac ccgatgcggc
    59701 gctgtactgg tatgcgcgaa ttattactgc cggtggcgat ccgttatatg ttgcgcgtcg
    59761 ctgtctggcg attgcgtctg aagatgtggg taatgctgat ccacgagcga tgcaggtggc
    59821 aattgcagcc tgggattgct ttactcgcgt tggcccggcg gaaggtgaac gcgccattgc
    59881 tcaggcgatt gtttacctgg cctgcgcgcc aaaaagcaac gctgtctaca ctgcgtttaa
    59941 agctgcgctg gcggatgctc gcgaacgtcc ggattatgac gtgccggttc atttgcgtaa
    60001 tgcgccgacg aaattaatga aggaaatggg ctacgggcag gaatatcgtt acgctcatga
    60061 tgaagcaaac gcttatgctg ccggtgaggt ttacttcccg cgggaaatag cacaaacacg
    60121 ctattatttc ccgacaaaca ggggccttga aggcaagatt ggcgaaaagc tcgcctggct
    60181 ggctgaacag gatcaaaata gccccataaa acgctaccgt taatgttatc gttgcggtaa
    60241 tgttgttact gtatccctgt ggtcgcaggc tgtggccaca tctcccattt aattcgataa
    60301 gcacaggata agcatgctcg atcccaatct gctgcgtaat gagccagacg cagtcgctga
    60361 aaaactggca cgccggggct ttaagctgga tgtagataag ctgggcgctc tcgaagagcg
    60421 tcgtaaagta ttgcaggtca aaacggaaaa cctgcaagcg gagcgtaact cccgatcgaa
    60481 atccattggc caggcgaaag cgcgcgggga agatatcgag cctttacgtc tggaagtgaa
    60541 caaactgggc gaagagctgg atgcagcaaa agccgagctg gatgctttac aggctgaaat
    60601 tcgcgatatc gcgctgacca tccctaacct gcctgcagat gaagtgccgg taggtaaaga
    60661 cgaaaatgac aacgttgaag tcagccgctg gggtaccccg cgtgagtttg actttgaagt
    60721 tcgtgaccac gtgacgctgg gtgaaatgca ctctggcctc gactttgcag ctgcagttaa
    60781 gctgactggt tcccgctttg tggtaatgaa agggcagatt gctcgcatgc accgcgcact
    60841 gtcgcagttt atgctggatc tgcataccga acagcatggc tacagtgaga actatgttcc
    60901 gtacctggtt aaccaggaca cgctgtacgg tacgggtcag ctgccgaaat ttgctggcga
    60961 tctgttccat actcgtccgc tggaagaaga agcagacacc agtaactatg cgctgatccc
    61021 aacggcagaa gttccgctga ctaacctggt gcgcggtgaa atcatcgatg aagatgatct
    61081 gccaattaag atgaccgccc acaccccatg cttccgttct gaagccggtt catatggtcg
    61141 tgacacccgt ggtctgatcc gtatgcacca gttcgacaaa gttgaaatgg tgcagatcgt
    61201 gcgcccggaa gactcaatgg cggcgctgga agagatgact ggtcatgcag aaaaagtcct
    61261 gcagctgctg ggcctgccgt accgtaaaat catcctttgt accggcgaca tgggctttgg
    61321 cgcttgcaaa acctatgacc tggaagtatg gatcccggca cagaacacct accgtgagat
    61381 ctcttcctgc tccaacgttt gggatttcca ggcacgtcgt atgcaggcac gttgccgcag
    61441 caagtcggac aagaaaaccc gtctggttca taccctgaac ggttctggtc tggctgttgg
    61501 tcgtacgctg gttgcagtaa tggaaaacta tcagcaggct gatggtcgta ttgaagtacc
    61561 agaagttctg cgtccgtata tgaacggact ggaatatatt ggctaatacc caatttttct
    61621 gaatctaaaa agcgcctgcg ggcgcttttt ttgtctccct ttgataccga acaataatta
    61681 ctcctcactt acacgtaata ctactttcga gtgaaaatct acctatctct ttgattttca
    61741 aattattcta tgtatacaag cctatatagc gagctgctat agaaataatt acacaatacg
    61801 gtttgttact ggaatcaatc gtgagcaagc ttgagtgagc cattatgaaa acgaaaatcc
    61861 ctgatgcggt attggctgct gaggtgagtc gccgtggttt ggtaaaaacg acagcgatcg
    61921 gcggcctggc aatggccagc agcgcattaa cattaccttt tagtcggatt gcgcacgctg
    61981 tcgatagcgc cattccaaca aaatcagacg aaaaggttat ctggagcgcc tgtacagtta
    62041 actgtggtag tcgctgcccg ctacgtatgc acgtcgtgga cggtgaaatc aaatatgtcg
    62101 aaacggacaa taccggcgat gacaattacg acggcctgca ctaggttcgc gcctgcctgc
    62161 gtgggcgttc catgcgtcgc cgtgtctaca atccggatcg cctgaaatat ccgatgaaac
    62221 gagtcggggc gcgcggtgaa ggcaaattcg agcgcattag ctgggaagaa gcctacgaca
    62281 tcatcgcgac caatatgcag cgcctgatca aagagtacgg caacgagtct atctatctga
    62341 actatggcac cggtacgctg ggcggcacca tgacccgctc ctggccgccg ggaaataccc
    62401 tggtcgcgcg gctgatgaac tgctgcggcg gctatctgaa ccattacggc gactactcct
    62461 ccgcgcaaat tgcggaaggt ttgaactata cctacggcgg ctgggcagat ggcaacagcc
    62521 cgtcggatat cgaaaacagt aagctggtag tgctgtttgg taataaccct ggcgaaacgc
    62581 gaatgagtgg cagtggggtg acttactatc ttgaacaggc acgccagaaa tctaatgccc
    62641 gcatgatcat catcgatccg cgctataccg acaccggtgc cgggcgcgaa gatgagtgga
    62701 tccctattcg tccgggaaca gatgccgcac tggttaacgg tctggcgtac gtcatgatca
    62761 ctgaaaacct ggtggatcag gcattcctcg ataaatattg cgttggctac gatgagaaaa
    62821 ccctgccagc cagtgcgccg aaaaatggcc actataaagc ttatattctg ggtgaagggc
    62881 cagatggcgt ggctaaaaca ccggaatggg cctcacaaat caccggtgtt ccggcagaca
    62941 aaatcatcaa actggctcgt gaaatcggca gtaccaaacc ggcgtttatc agccagggat
    63001 ggggcccgca gcgtcacgct aacggtgaaa tcgcaacccg tgctatctcg atgctggcga
    63061 ttctgaccgg taacgttggt attaacggag gcaacagcgg cgcgcgtgaa ggttcataca
    63121 gcttaccgtt tgtccgtatg ccgaccttgg aaaacccgat ccagaccagc atttcgatgt
    63181 ttatgtggac cgatgccatt gaacgtggcc cggaaatgac ggcgctgcgt gatggtgtac
    63241 gcgggaaaga taagctggat gtgccgatca aaatgatctg gaactatgcc ggtaactgcc
    63301 tgattaacca gcattctgaa atcaaccgta cccatgaaat ccttcaggat gataagaagt
    63361 gcgagctgat tgtggttatc gactgccaca tgacctcatc ggcgaaatat gctgacatcc
    63421 tgctgcctga ctgcaccgct tccgaacaga tggactttgc gctggatgca tcctgcggga
    63481 atatgtctta cgtgattttc aacgatcagg tgattaaacc gcgctttgaa tgtaagacca
    63541 tctatgaaat gaccagcgaa ctggcaaaac gtcttggcgt tgagcaacag tttactgaag
    63601 gccgtacaca ggaagagtgg atgcggcatc tgtatgccca gtcgcgggaa gcgattcctg
    63661 aactaccaac gtttgaagag ttccgcaagc aggggatctt taaaaagcgc gacccacaag
    63721 ggcaccacgt tgcttataaa gctttccgtg aagatcctca ggcaaattca ctgaccacgc
    63781 catcgggcaa aattgagatt tattcgcagg cgctggctga cattgccgct acctgggaat
    63841 tgccagaagg agatgtgatc gatccactgc cgatctacac gccgggcttt gaaagttatc
    63901 aggatccgtt gaacaaacag tatccgctgc agcttacggg tttccactat aaatctcgcg
    63961 ttcactcaac ttacggcgac gttgatgtgc tgaaagcagc ttgccgtcag gaaatgtgga
    64021 tcaacccgct tgatgcgcaa aaacgcggta tcaacaacgg cgataaagtc aggatcttta
    64081 acgatcttgg tgaggttcat attgaggcga aagtgacgcc acgaatgatg ccgggtgtgg
    64141 tcgcactggg tgaaggtgcc tggtatgacc cggatacaaa acgtgtcgat aagggcggtt
    64201 gtatcaacgt actgaccact caacgtccgt ctcctctcgc taaggggaat ccgtcacata
    64261 caaaccttgt tcaggttgaa aaggtgtaag gagtaaccga tgacaaccca gtatggattt
    64321 tttattgatt ccagccgttg caccggttgc aaaacctgcg agctggcctg taaagactac
    64381 aaagatttga cgccagaagt cagcttccgc cgcatttatg aatatgctgg cggcgactgg
    64441 caggaagata acggtgtctg gcaccagaac gtgtttgcct actatctgtc gatttcatgt
    64501 aaccactgcg aagatccggc ttgtactaaa gtctgcccga gcggtgcgat gcataaacgt
    64561 gaagatggtt ttgttgtggt cgatgaagat gtgtgcattg gctgccgcta ctgccatatg
    64621 gcttgcccgt atggcg
//
LOCUS       DADMIB010000007        57627 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.007, whole genome shotgun sequence.
ACCESSION   DADMIB010000007 DADMIB010000000
VERSION     DADMIB010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 57627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 57627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..57627
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.007"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..591)
                     /gene="wcaD"
                     /locus_tag="JNZ89_000463"
     CDS             complement(<1..591)
                     /gene="wcaD"
                     /locus_tag="JNZ89_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416560.1"
                     /note="essential for colanic acid biosynthesis; colanic
                     acid is an exopolysaccharide produced under stress
                     conditions that confers acid and heat tolerance; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid polymerase WcaD"
                     /protein_id="HAY8934436.1"
                     /translation="MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLL
                     LFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIR
                     FKTISPHNHRKILRFFYLVVGLVVALAAVEMAQIILTGGSSIMESISKYLIYSNSYVL
                     NFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIK"
     gene            complement(566..1783)
                     /gene="wcaC"
                     /locus_tag="JNZ89_000464"
     CDS             complement(566..1783)
                     /gene="wcaC"
                     /locus_tag="JNZ89_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaC"
                     /protein_id="HAY8934437.1"
                     /translation="MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGK
                     ESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHV
                     LHSHWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
                     TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN
                     NGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHT
                     FGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVI
                     ATHSDAAREVLQKSGGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAGFSQRSRAAYSGQ
                     QMLEEYVNFYQNL"
     gene            complement(1780..2252)
                     /gene="wcaB"
                     /locus_tag="JNZ89_000465"
                     /pseudo
     CDS             complement(1780..2252)
                     /gene="wcaB"
                     /locus_tag="JNZ89_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310890.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
     gene            complement(2255..3094)
                     /gene="wcaA"
                     /locus_tag="JNZ89_000466"
     CDS             complement(2255..3094)
                     /gene="wcaA"
                     /locus_tag="JNZ89_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000654502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaA"
                     /protein_id="HAY8934438.1"
                     /translation="MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCS
                     TSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNR
                     LSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQV
                     FTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSP
                     KKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGI
                     RGH"
     gene            complement(3272..5434)
                     /gene="wzc"
                     /locus_tag="JNZ89_000467"
                     /pseudo
     CDS             complement(3272..5434)
                     /gene="wzc"
                     /locus_tag="JNZ89_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416564.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase Wzc"
     gene            complement(5437..5880)
                     /gene="wzb"
                     /locus_tag="JNZ89_000468"
     CDS             complement(5437..5880)
                     /gene="wzb"
                     /locus_tag="JNZ89_000468"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase Wzb"
                     /protein_id="HAY8934439.1"
                     /translation="MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKG
                     ADPTAISVAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVM
                     LFGHWDNECEIPDPYRKSWETFAAVYTLLERSARQWAQALNAEQV"
     gene            complement(5886..7037)
                     /locus_tag="JNZ89_000469"
     CDS             complement(5886..7037)
                     /locus_tag="JNZ89_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HAY8934440.1"
                     /translation="MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADF
                     DLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPE
                     LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQ
                     VDVNIAAFRSQKTYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHN
                     GREERISLQVLMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM
                     TLTEALTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVM
                     ATEFRLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW"
     gene            7696..9279
                     /locus_tag="JNZ89_000470"
     CDS             7696..9279
                     /locus_tag="JNZ89_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310895.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HAY8934441.1"
                     /translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD
                     RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKAT
                     MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA
                     VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI
                     GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVD
                     HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEDEIRQLLERNQHT
                     RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR
                     NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG
                     HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR
                     VQKVQIIPLHKDGELEYEV"
     gene            complement(9553..11406)
                     /gene="asmA"
                     /locus_tag="JNZ89_000471"
     CDS             complement(9553..11406)
                     /gene="asmA"
                     /locus_tag="JNZ89_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane assembly protein AsmA"
                     /protein_id="HAY8934442.1"
                     /translation="MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSG
                     YQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVK
                     QVMLKGAVIQLTPQTEVVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
                     HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTA
                     AIEQINWQLQGADLPKQGIHGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTL
                     TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ
                     GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLD
                     ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG
                     QAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT
                     LNDMQGQSPVLALSGAGTLNLAEQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY
                     GNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM"
     gene            complement(11428..12009)
                     /gene="dcd"
                     /locus_tag="JNZ89_000472"
     CDS             complement(11428..12009)
                     /gene="dcd"
                     /locus_tag="JNZ89_000472"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HAY8934443.1"
                     /translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF
                     RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD
                     LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
                     EPLSGPAARPYNRREDAKYRNQQGAVASRIDKD"
     gene            complement(12101..12742)
                     /gene="udk"
                     /locus_tag="JNZ89_000473"
     CDS             complement(12101..12742)
                     /gene="udk"
                     /locus_tag="JNZ89_000473"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HAY8934444.1"
                     /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
                     PEDCYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEHLQALKRGSAIDLPVYSYVEHTR
                     MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
                     MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
     gene            13060..16357
                     /locus_tag="JNZ89_000474"
                     /pseudo
     CDS             13060..16357
                     /locus_tag="JNZ89_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
     gene            complement(16396..17253)
                     /gene="alkA"
                     /locus_tag="JNZ89_000475"
     CDS             complement(16396..17253)
                     /gene="alkA"
                     /locus_tag="JNZ89_000475"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HAY8934445.1"
                     /translation="MYTLNWQPPYDWSWMLGFLAARAVSGVETVADDYYARSLAVGEY
                     RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAAR
                     PGLRLPGCIDAFEQGVRAILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQR
                     LAAADPQALKALGMPLKRAEALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPGIGRW
                     TANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEG
                     WQPDGTDEL"
     gene            17387..18739
                     /gene="yegD"
                     /locus_tag="JNZ89_000476"
     CDS             17387..18739
                     /gene="yegD"
                     /locus_tag="JNZ89_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY8934446.1"
                     /translation="MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTRE
                     AVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEE
                     VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINF
                     QGLGGDEANAQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGG
                     GTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEK
                     GIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLS
                     YRLVRSAEESKIALSNAAETRASLPFISDELATLISQQGLESALSQPLARILEQVQLA
                     LDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGIPIAGGDDFGSVTAGLARWAEVVFR
                     "
     gene            complement(18751..20673)
                     /gene="yegI"
                     /locus_tag="JNZ89_000477"
     CDS             complement(18751..20673)
                     /gene="yegI"
                     /locus_tag="JNZ89_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310906.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YegI"
                     /protein_id="HAY8934447.1"
                     /translation="MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTP
                     PPASKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYS
                     PAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS
                     DSFQINVNGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGR
                     HPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQ
                     AFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLTDCPWCTLDNQGVIY
                     FVDLGEEVITTSGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYI
                     ILIEIALSALSLLLCGLQAEPRYIILVPVLSAIWIIGSLTSKVYKAEIQQRREAFNRA
                     KMDYEHLVSQIQQLGGLEGFIAKRAMLEKMKDEILGLPEEEKRALAALYDTARERQKQ
                     KFLEGFFASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASC
                     DRRFVFRPNEAVTPADRQAVMAAKRHRLESALTVGATELQRFRLYAPARTMPLMEPLR
                     QAAEKLAQAQADLSRC"
     gene            complement(20670..21431)
                     /gene="pphC"
                     /locus_tag="JNZ89_000478"
     CDS             complement(20670..21431)
                     /gene="pphC"
                     /locus_tag="JNZ89_000478"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase PphC"
                     /protein_id="HAY8934448.1"
                     /translation="MSWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFL
                     ADGAGSVSQGGEGATLAVNEAMAFMVQKVQDGELGLNDVLATNMVLTIRQRLFAEAEA
                     KALAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFI
                     TDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQE
                     QLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP"
     gene            complement(21428..22087)
                     /locus_tag="JNZ89_000479"
     CDS             complement(21428..22087)
                     /locus_tag="JNZ89_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY8934449.1"
                     /translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNAGL
                     VTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK
                     ALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIG
                     VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTS
                     V"
     gene            complement(22308..22367)
                     /gene="ibsA"
                     /locus_tag="JNZ89_000480"
     CDS             complement(22308..22367)
                     /gene="ibsA"
                     /locus_tag="JNZ89_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsA"
                     /protein_id="HAY8934450.1"
                     /translation="MMKHVIILVILLVISFQAY"
     gene            complement(22640..22696)
                     /locus_tag="JNZ89_000481"
     CDS             complement(22640..22696)
                     /locus_tag="JNZ89_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY8934451.1"
                     /translation="MMKLLIIVVLLVISFPAY"
     gene            complement(22968..23024)
                     /locus_tag="JNZ89_000482"
     CDS             complement(22968..23024)
                     /locus_tag="JNZ89_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY8934452.1"
                     /translation="MMKLLIIVVLLVISWPAY"
     gene            23303..24550
                     /gene="mdtA"
                     /locus_tag="JNZ89_000483"
     CDS             23303..24550
                     /gene="mdtA"
                     /locus_tag="JNZ89_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter subunit MdtA"
                     /protein_id="HAY8934453.1"
                     /translation="MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQ
                     QSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTIIAANTVTVRSRVDGQLMALH
                     FQEGQQVKAGDLLAEIDPSQFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLV
                     SRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQIS
                     SGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTL
                     LSLDNQIDATTGMIKVKARFNNQNDVLFPNQFVNARMLVDTEQNAVVIPTAALQMGNE
                     GHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGNRVVTDGIDRLTEGAKVEVVE
                     AQSATTPEEKATSREYAKKGARS"
     gene            24550..27672
                     /gene="mdtB"
                     /locus_tag="JNZ89_000484"
     CDS             24550..27672
                     /gene="mdtB"
                     /locus_tag="JNZ89_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtB"
                     /protein_id="HAY8934454.1"
                     /translation="MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVS
                     ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL
                     QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM
                     TQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAIT
                     GANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAE
                     NSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTT
                     NIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS
                     INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLIFS
                     LIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQN
                     RFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQD
                     NGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQ
                     INLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQAT
                     SLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNA
                     LYSAFGQRLISTIYTQANQYRVVLEHNTEITPGLATLDTIRLTSSDGGVVPLSSIAKV
                     EQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQFQGST
                     LAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALMIAGS
                     ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTT
                     LAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTK
                     SRFARHEEEA"
     gene            27673..30750
                     /gene="mdtC"
                     /locus_tag="JNZ89_000485"
     CDS             27673..30750
                     /gene="mdtC"
                     /locus_tag="JNZ89_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtC"
                     /protein_id="HAY8934455.1"
                     /translation="MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPV
                     IMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDIN
                     GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGKLYDFAST
                     QLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQG
                     ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN
                     AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV
                     EQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMAL
                     TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL
                     LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML
                     VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQA
                     DQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQ
                     QIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRK
                     KLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIY
                     QPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGL
                     SAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILI
                     IAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLI
                     GIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSG
                     GDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE"
     gene            30751..32167
                     /locus_tag="JNZ89_000486"
                     /pseudo
     CDS             30751..32167
                     /locus_tag="JNZ89_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416581.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            32164..33567
                     /gene="baeS"
                     /locus_tag="JNZ89_000487"
     CDS             32164..33567
                     /gene="baeS"
                     /locus_tag="JNZ89_000487"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     BaeS"
                     /protein_id="HAY8934456.1"
                     /translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK
                     HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG
                     WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD
                     KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED
                     ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE
                     TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG
                     LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFAD
                     SAPGVSDEQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
                     VSITVELPLERDLQREV"
     gene            33564..34286
                     /gene="baeR"
                     /locus_tag="JNZ89_000488"
     CDS             33564..34286
                     /gene="baeR"
                     /locus_tag="JNZ89_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BaeR"
                     /protein_id="HAY8934457.1"
                     /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD
                     QVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
                     GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD
                     LTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
                     QSFIRAVYGVGYRWEADACRIV"
     gene            34477..34809
                     /locus_tag="JNZ89_000489"
     CDS             34477..34809
                     /locus_tag="JNZ89_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310915.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HAY8934458.1"
                     /translation="MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIA
                     SVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGT
                     SQTVKDNT"
     gene            34932..36332
                     /locus_tag="JNZ89_000490"
     CDS             34932..36332
                     /locus_tag="JNZ89_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000911981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HAY8934459.1"
                     /translation="MLKGLRTLFSRRVLFNVEMNNSVDCELLLIQQQLQALIAEPGNY
                     LAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGHKEDVAAIEELLLAANDWVKEVRLA
                     ATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHRAFVDEILRYLLTENNRPQLTYW
                     LTCPDKKLSRAVLQTLIEYGYFNDESSLLSILDKPDEGLRMLATTHWLRQQLPLSEAV
                     LTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNNMLIRLRAKNMLHEVMDVP
                     QFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQNVFPLRLAAMHILAKA
                     NPRCGVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQLQENAPSVKHACAYC
                     RLYHNLNKWDGLILLLQSQHKLTEEFAGKQLAIWQRNFNLSGIQPNALQRQQLQALFT
                     RNPELHNRLWGYIPFK"
     gene            36653..38014
                     /locus_tag="JNZ89_000491"
     CDS             36653..38014
                     /locus_tag="JNZ89_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HAY8934460.1"
                     /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
                     HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
                     LVREYFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDME
                     IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY
                     EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
                     RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY
                     TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELM
                     TPQGNINFTLEHMENAKGVAMPVAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP
                     HGK"
     gene            complement(38344..38661)
                     /locus_tag="JNZ89_000492"
     CDS             complement(38344..38661)
                     /locus_tag="JNZ89_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934461.1"
                     /translation="MKKIAAISLISIFIMSGCAVHNDETSIGKFGLAYKSNIQRKLDN
                     QYYTEAEASLARSRISGAENIVKNDATHFCVTQGKKMQIVELKTEGVGLHGVARLTFK
                     CGE"
     gene            39075..39973
                     /gene="yegS"
                     /locus_tag="JNZ89_000493"
                     /pseudo
     CDS             39075..39973
                     /gene="yegS"
                     /locus_tag="JNZ89_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310919.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
     gene            complement(40055..40834)
                     /locus_tag="JNZ89_000494"
     CDS             complement(40055..40834)
                     /locus_tag="JNZ89_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8934462.1"
                     /translation="MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRF
                     LEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
                     VILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMH
                     GSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKF
                     NRRGFNQVLPIEKIDIIITDDAVSEVDKLALQKTRVKLITV"
     gene            complement(40934..41974)
                     /gene="gatD"
                     /locus_tag="JNZ89_000495"
     CDS             complement(40934..41974)
                     /gene="gatD"
                     /locus_tag="JNZ89_000495"
                     /EC_number="1.1.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HAY8934463.1"
                     /translation="MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR
                     IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ
                     CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITIGLHAFHLAQGCE
                     NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGSMQTFNSSEMSAP
                     QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI
                     LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFTQAVRDIA
                     RNAMPGKVLLIP"
     gene            complement(42022..43377)
                     /locus_tag="JNZ89_000496"
     CDS             complement(42022..43377)
                     /locus_tag="JNZ89_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HAY8934464.1"
                     /translation="MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIG
                     IGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPI
                     AILVNVAMLLTRMTRVVNIDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKL
                     GDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKF
                     GPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAK
                     QARSRLQAKFGGQEFLIGLDPALLLGHTAVVSVSLIFIPLTILIAVCVPGNQVLPFGD
                     LATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGG
                     MVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFITWRRARGFIKQEKAVLA
                     E"
     gene            complement(43381..43665)
                     /gene="gatB"
                     /locus_tag="JNZ89_000497"
     CDS             complement(43381..43665)
                     /gene="gatB"
                     /locus_tag="JNZ89_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIB"
                     /protein_id="HAY8934465.1"
                     /translation="MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEI
                     ETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG"
     gene            complement(43696..44148)
                     /gene="gatA"
                     /locus_tag="JNZ89_000498"
     CDS             complement(43696..44148)
                     /gene="gatA"
                     /locus_tag="JNZ89_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIA"
                     /protein_id="HAY8934466.1"
                     /translation="MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIARE
                     AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALI
                     VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE"
     gene            complement(44158..45420)
                     /gene="gatZ"
                     /locus_tag="JNZ89_000499"
     CDS             complement(44158..45420)
                     /gene="gatZ"
                     /locus_tag="JNZ89_000499"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatZ"
                     /protein_id="HAY8934467.1"
                     /translation="MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIE
                     ATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAA
                     MEKSVELVKEYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQ
                     REQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIVRGLTEALTRVIA
                     IVVQPGVEFDHSNIIHYQPQEAQPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFA
                     ILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGF
                     NDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDIPLGMISQYLPKQFERIQS
                     GELSAIPHQLIMDKIYDVLRAYRYGCAE"
     gene            complement(45449..46303)
                     /gene="gatY"
                     /locus_tag="JNZ89_000500"
     CDS             complement(45449..46303)
                     /gene="gatY"
                     /locus_tag="JNZ89_000500"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatY"
                     /protein_id="HAY8934468.1"
                     /translation="MHVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP
                     VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVM
                     IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQA
                     REFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDI
                     QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATEPRDYLQSAKSAMRDVVSKVIA
                     DCGCEGRA"
     gene            complement(46611..47663)
                     /gene="fbaB"
                     /locus_tag="JNZ89_000501"
     CDS             complement(46611..47663)
                     /gene="fbaB"
                     /locus_tag="JNZ89_000501"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HAY8934469.1"
                     /translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN
                     RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAI
                     EAGCNCVVSTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
                     AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA
                     DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL
                     ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
                     INAVQDVYLDSKITIA"
     gene            47920..49197
                     /locus_tag="JNZ89_000502"
     CDS             47920..49197
                     /locus_tag="JNZ89_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8934470.1"
                     /translation="MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYA
                     CTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYS
                     LTYMPTIALTNSIAFANVPDVERDFPRIRVMGTIGWIASGLACGFLPQILGYADISPT
                     NIPLLITAGSSALLGVFAFFLPGTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCS
                     FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL
                     LGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMR
                     TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAII
                     AVLFMIFFCESDNEITAIKVDDRDIALTQGEVK"
     gene            49194..50198
                     /locus_tag="JNZ89_000503"
     CDS             49194..50198
                     /locus_tag="JNZ89_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HAY8934471.1"
                     /translation="MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPG
                     PKENNAACYFNRAEFTDDTSMALCLADALLERKGKIDPDLIGRNILDWALRFDAFNKN
                     VLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALAS
                     SPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSITRHAQQKRTTTFSASLAAR
                     LEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCAN
                     LGGDTDTIGAMATAICGALHGINAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV
                     "
     gene            50195..51160
                     /locus_tag="JNZ89_000504"
     CDS             50195..51160
                     /locus_tag="JNZ89_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8934472.1"
                     /translation="MSGARLHTLLPELTTRQSVMVVGAAVIDVIADAYALPWRGCDIE
                     LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAE
                     GDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL
                     LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE
                     ITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVL
                     AGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV"
     gene            complement(51134..51880)
                     /locus_tag="JNZ89_000505"
     CDS             complement(51134..51880)
                     /locus_tag="JNZ89_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY8934473.1"
                     /translation="MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHG
                     NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFS
                     QQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESW
                     VPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVI
                     KQVALDQQQRPIEYSISHCRSDLYVFVCEE"
     gene            complement(51932..52750)
                     /locus_tag="JNZ89_000506"
     CDS             complement(51932..52750)
                     /locus_tag="JNZ89_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 25 family protein"
                     /protein_id="HAY8934474.1"
                     /translation="MQLRITSRKKLTSLLCALGLISIVAIYPRQKVNFFYSTAVQITD
                     YIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKAT
                     EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVAAPVQARLFLQTVDFSQGDFPAVL
                     DVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH
                     YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQAFVDGIKETP"
     gene            complement(52815..53615)
                     /gene="thiD"
                     /locus_tag="JNZ89_000507"
     CDS             complement(52815..53615)
                     /gene="thiD"
                     /locus_tag="JNZ89_000507"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HAY8934475.1"
                     /translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
                     NTRGVQSVYRIESDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQYV
                     VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE
                     QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA
                     LAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW"
     gene            complement(53612..54400)
                     /gene="thiM"
                     /locus_tag="JNZ89_000508"
     CDS             complement(53612..54400)
                     /gene="thiM"
                     /locus_tag="JNZ89_000508"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HAY8934476.1"
                     /translation="MQVDLQSSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLAL
                     GASPAMVIETEEASQFAAIASALLINVGTLTQLRAQSMCAAVEQAKSSQTPWTLDPVA
                     VGALDYRRRFCLELLPHKPTAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTL
                     ARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTL
                     ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA"
     regulatory      complement(54435..54531)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(56112..56405)
                     /locus_tag="JNZ89_000509"
     CDS             complement(56112..56405)
                     /locus_tag="JNZ89_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000274322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934477.1"
                     /translation="MYGQDTTAGGNLKKDSPLGKLWDFLHSPDLPTNPDFAKPADKTG
                     WVSSYSNPTYVPPTPTITAPQLKVDMAGNPLMTPPAWLNQPLNVNVNVKVQDG"
     gene            complement(56369..>57627)
                     /locus_tag="JNZ89_000510"
     CDS             complement(56369..>57627)
                     /locus_tag="JNZ89_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005135759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HAY8934478.1"
                     /translation="MIEGAGGAITIAATVALSGKIMTTGQDFESALSGLTAITGSTDK
                     AAKEFDYLRDQSNRLGLDLLKTSRDYTQFAAAVGDKLPKDQMRSIFEGASEWGLVTGA
                     SADEASRALKSLNQMMSKGTVMSEELKGQLSEALPGAVGLFVKALNQMKGTTNLTEKD
                     LFDLMQQGKLFSKDILPEVAKQMKAAARNGGALDKAMKSNRASWQRLQTSMQNAMNIF
                     FASGFGNELTSAFDAISAAVNGSGGAFEMFGHIAGKIVEGATDAFTELHDTVILTFRI
                     IEYYASKMGITGEQLKAWGEMAAYAAGVAMFAGSIWKLGVAFKWLLTMLNPLTKLLGV
                     MKGIAAIGGIEAATTGGSGGEGKDKPNKPGRGPKVGKVGGAAALSGGPVGWSIAVGSV
                     GGDYAWDKVMTLTTPCMDRTPPPGAI"
BASE COUNT        13705 a        15130 c        14575 g        14217 t
ORIGIN      
        1 tttgatacca aactgtttga tgctgagcca aattgagatt aatgccagag cgaaaaatgc
       61 cggttcgaaa taaagtgctg tcgtgcgctt gccgccgaat ttaatgaaat tcagcacata
      121 gctgttgctg taaatcagat atttcgaaat cgactccata atactgctgc caccggtgag
      181 gataatttgc gccatctcca ctgccgccag cgccaccacc agccctacca ccagataaaa
      241 gaaacgtaat atcttgcgat ggttgtgtgg cgaaattgtt ttaaaacgaa tactccacac
      301 catgccaata atgatcacaa tatagacaaa cagcatggtt gaagtgacgt atttactggc
      361 atccagcgac tgaccaaaca ggtagttaaa cgccgtgagt cccgcaccaa tccctaaggc
      421 aatcatcaat tttttaacgc tgatgcgttc taaaaacagc agtaacaaga caggtaaaaa
      481 agtgacgata gtgatgggga aactttcacc aagctgggcg attttgacgt taaccagcag
      541 gtagatcagc ggcagcagca ggtagctaca gattctgata gaagttgaca tactcctcca
      601 gcatctgttg tccactgtag gcggcgcggc tgcgctggct gaacccggcc aacgtggtac
      661 caaatatcgc ctgcgcgatt tccggtttgc ttaattgcac tagttgcagc acctcttctt
      721 cgctgacggt tttaccgccg gatttttgca acacttcccg cgccgcgtcg ctatgggtgg
      781 caatcaccgg cacgccaatc gatagcgcct cacacaaaat cagcgggtag ttatcgacgc
      841 gagaactgaa caccagcgca tccatctgat tgagcgcgct catcaacttg cgcttgtcag
      901 tttcaaagcc gtgattaacc acgttgccag cggtgaacgg cgagaactta ccaaaggtat
      961 gcagttcgat tttgtcgccc agcgccatca tctcacgcac cagttgctgg ttagtcttgc
     1021 cgtcgtaacg caagtcatgc gccaccaccg cgattttcgg cttgccctgg gtttcgcgca
     1081 ccggaggcaa gtccgccaga atcgcttcgg ttgccatatc aataccatta ttgataatcc
     1141 ggcaacgccc tggaccgtac aggctattga aagcgtcagc cacatgctgg ctgggggaaa
     1201 taaactgaca gcccagcgcc agcatctcac ggaataactg gcgtttgccc gccaccagct
     1261 ggtgtgcgcg atcaatcttc accggcggat agttattcaa ggtcgggcat ttctggcagc
     1321 ccgttttcca gccttcgcaa ccgtcggtaa aggcgcagcg tccggtaaca ctccagtggt
     1381 cgtgcagcgt ccagaccaga gtgacgtccg gtttatggtt tttcactttt tcgcaaaagc
     1441 gcaccacgct cttaagattt agccagtggc tgtgcagcac atgaaaatgc aggaccaccg
     1501 gacccggtgt gcgagtaatg gtgcgatata actcattgaa attgccaaac agatcgcgat
     1561 taaacagacg aaacagggca atattcgcca tcgcggtcat ccgcggcgta tgtttgatga
     1621 cctgcggata gttctgatgg ctgacgctct ctttgccgcc tttgccgtaa ccgtagacaa
     1681 aatgtgacgc cagcccctgt tgcagcgcac gctggtggag atctaacgcc acacctgctg
     1741 ccccgccttc cgccagtcgc acattaaatt gcagaatatt catttaatta ccttcactcg
     1801 cgctttttct cctaccacca gcgcgttgtc cgggacagag tcgagcacca cgctgcccgc
     1861 acccacggtg acgttgttac caagcgtgat atcaccaaga ataatgacgt tggcaccgag
     1921 ttcgacgccg ttgccaatgt gtggacatgc catgttatcg gcaccacgat tgccgatagt
     1981 gacgccgtgg cgaatggtga aatcatcccc cgctaccacg tttttattga tcactacggc
     2041 gtaaccgtga tggatagtaa agcggcggcc tggatttcat aaccgaaaaa gcattcggtg
     2101 ataatgcgat acagcaccag cagcggggcc gcccacagat tgttgaggac gttctttttg
     2161 cgccacaccg aacaaaaatg agcaacacga taggcaagaa ccatgcagca cgggcgtaaa
     2221 ctccagctgt tggcacgcag atcttccagc atctttagtg cccccgaata ccatcagcca
     2281 gacgtttgcc gttacgcacc gacagcagcg tcagcaaagt gcgccaggtc atacgtttat
     2341 tgcggatctg gtagagggta aacagctgat attttttgct tgcacggtca aatttatctt
     2401 tgtgctttcg gtaaaagtgg aagtacccgg agaatttttt cggtgacgag gtgatctgca
     2461 tttcaccgtg attgatatgc aggatctgcg tcgcttcttc cactttccac ggttcgccgt
     2521 actccaccac catccgcagg aagatgtcgt aatcctgtgc tgctttcagt tcggtatcga
     2581 acaaacactc tttgaaacgc catgcccaag taaagacctg attgccaatg atattgcgtt
     2641 tatagaacag gcggcgtgaa tacggcgatt tgggatatag cggcaaactt gctggttggg
     2701 aatagacttc gccctggcaa acgtagtcgt tagcgtacaa aaaggcgtga gtgaccagtt
     2761 gctgtttatg ggcgaggaag acgctcagac ggttgggtgt ccattcgtca tcgtcatcaa
     2821 tcccggtgat gtattcccct tgcgccagca taatcgcctg gttacgtacc gcgcacgccc
     2881 cgctgttaat atcgttgtgg atgtaagtga tacgcggatc gttgagggcg gtgacgtact
     2941 gttgcagttg ttcccaggag gtggagcaat catccacgat gatcatctcc cagttgctgt
     3001 agtcctggcg caggaccgat tttatcgccc gaatcgccag ttgttggcgg ttccaggtcg
     3061 gcatatagat tgagatcagc ggattgtctt tcataggttg ttctcccgga gtgtcgagat
     3121 gttctgccgg tttataagct tgtttacggg ttctgttgcc ggatgcggcg tgagcacctt
     3181 atccggccta cggagctggt ttgcttgccg gatgcggcgt gaaggtaggt cggataagat
     3241 gcgtcagcat cgcatccgac agcggatgtc gttatttcgc atccgactta tattcgtatt
     3301 cgtaatagcc ataatcctga tacgcgctgg cgcggcggaa gatggagttc agaatcaccc
     3361 ctttcaccgg aataccgttt tgctcaaagc ggctcagact ggtttccact tctttcaagg
     3421 tgttgaccgc ataacgcgcc accattaacg tggttccgac atgacgacca acaattgccg
     3481 catcggtcac tgccagaatc ggcggcgtat caatcaacac caggtcatag tttttactcg
     3541 cccagttcac cagttcggca aagcgttcgc tcatcaacag ttcagaagga tttggcggca
     3601 cctgaccgcg cgggatcagg tcaaatttgg caatagaggt cggtttagca gcggtagtaa
     3661 tatcgccctg accaatcaga atttccgaca ggccattaac gttattagtg cacagcagct
     3721 cgtgggtgta gcctttgcgc atatcgcagt cgatcaacaa cacccgttta ttggtctggc
     3781 tgatcaccgc cgccaggttg gcgcagacaa aggttttacc gattgacggg ctaaccccgg
     3841 tcatcatcaa cacattgttc tgtgcctgca tcatcgcgaa gtgcaaactg gtacgcagac
     3901 tgcggatggc ttcaatcgcc agatcggttg gattccccat cgccagtagc tggctctgtt
     3961 tatagcgttt aatccctttg atggttttga cgctatcgcg cgctttctgc cattccgaca
     4021 gcgggatgct ggcatagacg ctgataccgt gttcttccag cacctgcggg ctttcgatgc
     4081 cgcgattaaa caacgagcgc agcagcacac ccacgataga aagcatcagg ccaaggataa
     4141 tcgcgccgag gataatcagc cctttcttcg gttttagcac gccaggctgg gtgattgccg
     4201 ggtcaacaat gcgcacatcg ccgacggtgc tggcttcggt gattttcagc tcctgctctt
     4261 tattcagcag ttgcatatag acctgctgac cagactcgac atcgcgggtc aggcgcacaa
     4321 tctcctgctg ggttttcggc atcgccgtta cgcgaccgtt aagtttggct ttctcttctt
     4381 ccagcgcctg acgtttctcc agcagcgtgc ggtacgccgg gtgaactttg gtgtacagct
     4441 tggagatttc cgcctcttta aaggtcagtt cgttcaactg cgcgtcgatg ttcaccatcg
     4501 aatcgagcac cgctttcgct tccagcggca gatcaacaga atctttatcc tgacggaagg
     4561 cattcagttt gttttcggca acatcgaggc ggctacgtac ttccggtaac tgttgcgcga
     4621 ggaaagcgag gcttttcgac gcttccgccg atttgcgctc aatattttgt tcctgatagt
     4681 tacgggcgat gctgttaaga atgtcgcgga tctgttcgcg atcttcaccg gtataagtca
     4741 ggctcagtac gcctgcgtct ttgccgttct ccgttaccat caggctgttt tgcagttggt
     4801 tgatcatccc caacgtggag tatttggtga cggtaaactc actgcccggg cgggcgtgaa
     4861 tggcttcaac catcagcgtg acgccttctt ttttcagcat ctggcccgct tgcccacggg
     4921 cgctaaagcc gccatcactg ctcagggtgt agtttttatt gtccagcaca ttaagcgtaa
     4981 acacctagtc cgccatctct ttcgggcggt taaaggtagt cactttcacc gtctcgttct
     5041 ggcgtcccat cagtcgatcc cagcccgccc cgaaaatcgg gaacgtgttt ttgctcactg
     5101 caatatcgag gtcgagatcg tccaccgttt taccaagcac cagacgcgaa cgaatcaact
     5161 ggatctcggc gtccgatgca ggcggtttgt tggctaatgc cgaaccaatg tcctgcacta
     5221 acgaattgcc gctgttttgc tcgatttgta ccagtgcgtc ggcactataa atcggcgtgg
     5281 cgaagaaggt gtaaaccacg gcacagagga caaatacagc ggtgatgcca atcacccacc
     5341 agcgcgcttc aatgacggtg ccgaccaggc gaccaatatc gatttcatca ctgcccgtta
     5401 ccggagcggc atgttgtttt actttttctg tcattcttat acctgctctg cgttcaatgc
     5461 ctgcgcccac tggcgggcag accgttcaag taatgtgtac accgctgcaa acgtttccca
     5521 gcttttgcga tacggatcgg ggatttcaca ttcgttatcc cagtgaccaa acagcatcac
     5581 tttgccgcgc atctcaggtg ccatctcgca taagcgttcg atatggcgct tttccatggt
     5641 caaaatcagg tcatagttgc gacacaggcg gcggctgatt tgtcgtgcac agtggccttc
     5701 cagagacagt tgatgttctg cggcgacgct gatagcggta ggatcagcgc ccttaccgac
     5761 cagcgcgccg agtccagcgg actccacttt cagttccggg tgataacgtt gcagtaagcg
     5821 ttccgccgtc ggggaacggc aaatattgcc gacacagaca actaatatgt tgttaaacat
     5881 gacgattacc agttatgaat gtcgctggct gtatccgtca tgtaacggac accgctaata
     5941 gttggcagca actgattgat cagacggttc cagcgggaaa ccggggcggt ggtgacatac
     6001 accacgtcat aaggttgcag gcggaattct gtcgccatca ccagcgacgt ggcatcggac
     6061 atatccagct ggtagatatt ggcaatcttg ccgttacgcc cgccctcgcc tttcagcgga
     6121 cgaatgacaa agatgccgct ggcgttggag gtggtcatgt cgataccttc agcattaccc
     6181 agggcttcag tcagggcttc agtcagggtc atgccgctaa agtccatttt cagggtgctc
     6241 tgtttcttca cttcacccat cacaaatact ttcagatcat cattacgcgg cacgtagaga
     6301 atatcgccgg gataaagcag tcggttctga ttgaggtcgc cgttttgcat cagcacctgc
     6361 aaagaaatgc gttcttcacg accattgtgt gttagcacca cgttgcgcca gtcagcggtg
     6421 tcggtcaggc cacctgcggc gttgatggcg tcgagaatgg tcagtggtac gttggtgatc
     6481 gcctgttgac cggatttatt cacctgacct gagatatagg tcttttgtga gcggaaggcg
     6541 gcgatattaa cgtccacctg cgggtcagcg atgtacgtcg ctaagcgccc ggtaatatca
     6601 ctgcggattt cagcgagcgt tttcccgact acgtgaacct tgccgatata cgggtaaaac
     6661 atagtgccgt caggctgtac ccagttgccg gtgtcgctgg agctgcggta ctgaccagct
     6721 ggcgtggtga gttccgggtg atcccagacg gtgacattaa gaacgtcccc cggcccgacg
     6781 cgatactggt aattcgcgat ctcgctttcc agcgtcatat tggggcgcgc tacattcggg
     6841 cgtgggcgta attggtcaat caggcgcggg gtcagcggat aaacattcac cattttgtcg
     6901 agatcgaaat cagcgtcctg ctgtttgatg acgtctttgc ccatcgtcga catattgctg
     6961 cccggaagta ctgtgcaacc gcttatcaag gttactgaca ccaataatgg catcaatttc
     7021 attttggatt tcatcattgt ttatttatca ctttggcaga gtaattatcc tgtgcactat
     7081 taatagcaat gtcgccatgc acatttacct tgcagttaat tgaatacaaa tttaactggc
     7141 atcagtccta aaaaaattga tttcatccgc aggctattga cagaataatt cagactggtc
     7201 tttcaggcat ccagacacgc taccgcccct ggctttttag ccaccaatac actgatttag
     7261 cttaattttt taaaccctct ctgcatacaa tcgttgatga gaaagggtta ttgcggaaat
     7321 taacttccga atataaggtg acattatggt aattgaatat tggctctcca ataatgcagg
     7381 aggaagtgtt acagctaacg gaatagcagg caaggtaaca attcggcaat tggctatttt
     7441 taagaattat attaagtgtc attcaatatg gtttttagga gtttctttag gttgacaata
     7501 tttaatattg cgcctccgca tgcgatattt cttaaataat gttttattat taccactttt
     7561 aattcaggga taatgtgagg ttattaccct caaataatat gagataaata gtgctgcaac
     7621 attgcatttt tgccccgatt tatccatgat cgaattgtga catttgtcat acaacgaata
     7681 ggttttgtac ttactatgga atggattgcc gatccgtcta tctgggccgg gttaatcacg
     7741 ctgattgtga tcgaactggt cctcggcatt gataacctgg tctttattgc catcctcgcc
     7801 gaaaaactac cgccgaagca gcgcgaccgc gcacgggtta ccgggctgtt gctggcgatg
     7861 ttaatgcgcc tgttactgct ggcgtcaatc tcctggctgg tcaccctgac gcaaccgctg
     7921 ttcagcttcc gctcgtttac ctttagcgcc cgcgacttaa tcatgctgtt tggtggtttc
     7981 ttcctgttgt tcaaagccac gatggagctg aacgaacggc tggaagggaa agacagcaat
     8041 aatcccacac aacgcaaagg tgcgaagttc tggggggtgg tgacacaaat tgtggtactg
     8101 gacgccatct tctcactcga ctcagtgatt accgccgtcg ggatggtcga ccatttactg
     8161 gtcatgatgg ccgccgtggt tatcgctatc agcctgatgt tgatggccag caagccgtta
     8221 acgcaatttg ttaacagtca cccgaccatc gttattctct gcttaagctt cctgttgatg
     8281 attggcttta gcctggtggc agaaggtttc ggcttcgtca ttccgaaagg ctacctgtac
     8341 gctgccattg gtttctcggt aatgatcgag gcgctcaatc agttggctat ctttaaccgg
     8401 cgacgttttc tttccgctaa ccagacgcta cgccagcgga ctaccgaagc ggtaatgcgc
     8461 ctgcttagcg ggcaaaaaga agatgcggaa ctggacgccg aaaccgcgtc catgctggtg
     8521 gatcatggta accagcagat ctttaatccg caggaacggc ggatgattga gcgggtactt
     8581 aatcttaacc agcgtactgt cagcagcatt atgacgtcgc gccacgatat tgagcatatc
     8641 gatctcaacg cgccggaaga cgagatccgc cagttgctgg agcgaaatca gcatacgcgg
     8701 ctggtggtta ccgacggtga tgacgcagaa gatttgctcg gtgttgttca cgttatcgac
     8761 ctgctacaac agtcactgcg tggcgaaccg ctcaacctgc gggtgttgat tcgccagccg
     8821 ctagtgttcc cggaaacctt gccgttgtta cctgccctgg agcagttccg taatgcccgc
     8881 acacactttg cttttgtggt ggatgagttt ggctcggtgg aagggattgt gacattaagt
     8941 gacgtcactg aaaccattgc cggtaactta ccgaacgaag tggaagagat cgacgcccgc
     9001 catgatattc agaagaatgc ggacggttcc tggacggcga atggtcatat gccgctggaa
     9061 gatctggtgc aatatgtgcc gctgccgctg gatgaaaaac gtgaatatca caccattgcc
     9121 gggctgttga tggaatattt acagcgtatt ccaaaacctg gcgaagaagt tcaggtgggg
     9181 gattatttgc ttaaaacgtt gcaggtggaa agccatcgcg tgcagaaggt gcagattatt
     9241 ccgctgcata aggatggcga gttggagtac gaggtgtgat ggtatcggtc attttaccca
     9301 atagccgaaa ggaataagat gagggaaccg cgccagcggc gatttaccgc cgggagcccg
     9361 ggttgccagg gtggtggcga ttgagccccc ctggcacgtt caccggcttg agcgttccat
     9421 agtagcgagg aacatcaagt gaacggaaca gccttcgatc ttacatattc agaatataat
     9481 gatgccgcca cgaacgcctg atgcgacgct ttacgcgtct tatcaggcct acaggacagg
     9541 tcaccaggta acctacatct tctccagcaa cttcttcaca tctttgccat tgcgggaatc
     9601 tttattccgc tcggcccagt cattcagacg acgtttcgct tcgtcctgta gatgtttgcg
     9661 cagtaactga tccacttgca gactgtaatt gagttgctgc cagttgccat aaacccgcag
     9721 cggtactggc gtttctttaa ggaaatcaat cagtttgctt tccccgttcc agccacccac
     9781 gacccgaata tcaaactggg tgtcgcaggt ttgctccgcc agattcaacg taccagcccc
     9841 ggaaagcgcc agcacaggcg attgaccttg catgtcgttt aacgtcacga cgccatcctt
     9901 caacgtcaaa tcggtggtaa agcggtcaag acgcgttacg ttatcgaagt tttcagcggc
     9961 cttcacatca ccaccattac gttctaccgc ttgctgaatc atctgctgga agttcatccc
    10021 ttccatgcgc gtgtcggtca tttcgacatg tgcctgtcct tgccagttgt ggcggaatgc
    10081 gtcggcatct atgtcagcac cggagaaatc accagccagt gacatctttc cggtcaacga
    10141 aatcggatag ttaaacgcct tcagaatggt gccaatctca acgttttcca gccgtggctg
    10201 gaagtttatc cgcggattta ttgatgtcgc gtccagcgtg cccggcagtg aaacctgtcc
    10261 accgttaagc ttgccctgca gttgagtaat ttccagcaaa cccgacttgt tggtcatttg
    10321 cgtggcaaca tctgtaaaat tcattccgcg ccagcgcacg ttactggcct gcaacaaaat
    10381 atcagccgta aagccttgca gtccctgata tgccggttca tcaatacgcg aagaaatgac
    10441 cgggcgcggc aacgttgatt ggctctgccc ctgctgcgcg gcaccgtttt caccattcgc
    10501 tgtttcatta agcgggatga ggttgtcaag attcagttgc gggaattgca gtctcagctg
    10561 ccattccggt ttctctgtca gcgtgacctg tgcttgcccg ctcagcgtac tgtcattggc
    10621 ggtcaaacta atttggttaa atgaaaggcg tttatgtgac tcctgccact gggcctggaa
    10681 actcccctgc ccatgaatac cttgttttgg taaatctgca ccctgcaact gccagttaat
    10741 ttgttcaata gccgccgtta aatcatgcgg ataatcagaa gcatctaccg taccgttaag
    10801 ggatatcgtg agatcgcgct gatcgcgatt aacccgcccg gagaactcaa atgaaccacg
    10861 atgttgggga tcttgttcca tttgcaggcg aatattgcgg attgtcacct gctcgtcatc
    10921 ttcatgctgg aacaccagca cgctgtccgc caccttaaga ctggatatat caaacgacca
    10981 tccgcgatcg tctgacagat ccggcaaggt attgtcgcgc ggtgcaaccg gagcgtcttc
    11041 actgcgcacc acttccgtct gcggcgtcag ttggatcact gcccctttta gcatcacctg
    11101 cttaacgctc agttgatgac tcagtagtgg taaaagcgcc acgtccagac gcatgttgtc
    11161 ggcgcgaacc agtggctggc tcgcgccctg ggcggtgaga gacattcgcc cagagaggat
    11221 actaagctgc ggccagacgt gccaacgcag tggcccgtcg agctgcaatt gataaccgct
    11281 acgtgcagca acttgcttga ccatatagtt gcggaaatca ttcggattca ccagcaacac
    11341 taacgcagat aacccggcca ccagcacgac caggagtatc atcagcgtcg tcagaaatcg
    11401 tctcatggta tcctcaatgg gcctgaatta gtctttatcg attcggctgg ctaccgcgcc
    11461 ctgctggttg cgatatttcg catcttcacg gcggttgtaa ggtcgcgccg ccgggccgga
    11521 aagcggctca aagctcagcg caccaattaa catgcccgga cgcagcgcca gcggcagctt
    11581 accggagttg tagaactcca gcacaatgca accagaccag cccggatcga tacggtgcgc
    11641 ggtgacgtgc accatcagcc ccagacgcgc caaagaggaa cgcccgtcca gccagcccac
    11701 cagatcggct ggcagcgtca ccgactccag cgtcaccgcc agcgccagtt ctcctgggtg
    11761 aagatagaac gcctcgccct cgtcgagaac gatctcatcg ctcatcacgc ggtcaagcgc
    11821 ggcgctcact tcatctttgg gaccgctcag atcgataaac gctgccgtgt gaccacggaa
    11881 ggtacgaaat ttattgccca ggcgtacatc caccgtcgcg ccgttaatac gctccactgg
    11941 cggacgtggg ttgatcgaca aacggccttc atcaagccag gcttcaatat ctcggtcaca
    12001 cagacgcatg gcattttctc ctttcgcgca tcactccctt aacgccaatt acgtcaaggg
    12061 cataccaggt tatcactgaa cggtacacaa tttatcaagc ttattcaaag aactgactta
    12121 ttttcgcttt caatatatcg atcgcgatgc ggtttttccc gccgcgcggc acgataatgt
    12181 ccgcatattg tttagaaggc tcaatgaatt gcaggaacat cgggcgcacg gttttttgat
    12241 attgcgccat cacggaatcc attgaacgcc cacgctcgtt aacgtcacgc ttgatgcggc
    12301 gcatcaggca gatatccagc ggggtatcaa cgaaaatgga gaagttaagt tcgtcacgca
    12361 aacgcgcatc cgtcagcaac aaaatgcctt cgagaatgat gaccttcttc ggctcaaccg
    12421 tcaccgtttc tttcatacgc gtatgttcaa catagctgta aaccggcagg tcaattgccg
    12481 agccgcgttt caacgcttgt aaatgctcaa gcagcaggtt gtgatccatc gcgctgggat
    12541 ggtcgtagtt ggtcttaacg cgttcttcca tcgacagatg gctttgatct ttgtaatagc
    12601 agtcttcggg aattacgccg atgtgttcat caccgacttg ctcacgtaat tcacgataaa
    12661 gggtactggc aataagactc ttgccggaag ccgatgcgcc agcgataccg ataatgacgc
    12721 actgatgaga ctgatcagtc atatatttag cgacctgatt aacctggatg ttaggaaggg
    12781 ggcgacgaag cgccaaacgc ggcaattata gggatttcat ccgcctgata ccagtcgaat
    12841 agcgttgccg cgcgctcaga gttaattgtt gacaaagaat tcccggtggc aaattacgtt
    12901 gatcagtttt atgtaaggta aaaaatgtta tacgcagttg cgcaaattat ccgcctttac
    12961 gtcactttat gagcaattca catataaaat gtaaaacttt tgtactagca taaacacaga
    13021 aacgaatact ggcgacctgg tcttgcggat aaagcggtaa tgagcaaaca atcacagcat
    13081 gtattaattg ccctgcccca cccactgctt cacctggtca gtttaggttt agtctcgttt
    13141 atctttaccc ttttctcgct tgagctttcg cagtttggca cccaactcgc cccactgtgg
    13201 ttcccgacgt ccatcatgat ggtggcgttt tatcgccatg ccgggcgcat gtggccggga
    13261 attgcgctga gctgctcgct gggaaatatc gccgcatcca tcctgctttt ttccaccagc
    13321 tcgctgaaca tgacctggac gaccatcaat attgttgaag ccgtggtcgg ggcagtgctg
    13381 ctacgtaaat tgctgccgtg gtataacccc ttgcaaaatc tggctgactg gctgcgtctg
    13441 gcattcggca gcgccattgt tccgcctctg ttagggggtg ttctggttgt cctgctgacg
    13501 cccggagacg atcctctcag ggcatttttg atatgggtac tgtcagaatc catcggcgct
    13561 ctggtactgg tgccgctggg attgttattt aagccacact atctgctgcg ccatcgcaac
    13621 ccacggttac tttttgagtc actgctcaca ttagccatca cgctgacgtt aagctggctt
    13681 tctatgttgt acctgccgtg gccttttact ttcattattg tgctgttgat gtggagcgcc
    13741 gtgcgcctgc cacgaatgga agcctttttg atcttcctta ccacggtgat gatggtgtcg
    13801 ctgatgatgg ccgcggatcc ctccctgctt gctacgccgc gtacgtacct gatgagccat
    13861 atgccgtggc tactgttttt gctgatcctg ctgcccgcca acatcatgac catggtgatg
    13921 tatgcctttc gtgcggaacg caaacacatt tccgaaagcg aaacccgctt tcggaacgcg
    13981 atggaatatt ccgctatcgg tatggcgtta gtgggcaccg agggacaatg gctgcaaacc
    14041 aacaaagcgc tctgccagtt tctcgggtac agtcaggaag agctgcgcgg actcaccttt
    14101 cagcaactga cctggccgga ggatctcaat aaagatctcc aacaggttga aaagctgata
    14161 agcggtgaaa taaacaccta ttcaatggaa aaacgctact acaaccgtaa tggcgatgtt
    14221 gtctgggcgt tgcttgccgt ctcactggtg cgccacacgg atggcacgcc gctctatttt
    14281 atcgctcaga ttgaagacat taacgagcta aaacgcaccg aacaggtgaa tcagcaactg
    14341 atggagcgca tcacgctggc taacgaagcg ggcgggattg gcatctggga gtgggagctg
    14401 aagccgaata tttttcgagc tgtatgaaat tcctccgcat atcaaaccga actggcaggt
    14461 gtggtacgag tgcgtgctgc cggaagatcg ccagcatgcc gaaaaagtga ttcgtgattc
    14521 gttgcaatca cgctcgccct ttaagctgga atttcgcatt accgtaaaag acggtattcg
    14581 ccatatccgc gccctcgcca accgggtact gaataaagaa ggcgaagtcg aacgcctgct
    14641 cggcattaat atggatatga ccgaggttaa acagcttaac gaggcattgt ttcaggaaaa
    14701 agagcgcctg cacattacgc tggattccat cggtgaagcc gtggtctgta ttgatatggc
    14761 gatgaaaatt acctttatga atccagtggc ggagaagatg agcggctgga cgcaggaaga
    14821 agcattaggt gttccgctcc tgacggtgtt gcatattact tttggcgaca acggaccatt
    14881 aatggagaac atttacagtg ccgacacctc acgttccgcg attgaacaag atgtggtgtt
    14941 gcactgccgg aacggcggca gttacgacgt gcattacagt attacgccgt taagtactct
    15001 ggacggcagc aatataggct cggtactggt gattcaggac gtcaccgaat cacgcaaaat
    15061 gctgcgccag ctgagctaca gcgcctccca tgatgcactg acgcatctcg ccaatcgcgc
    15121 cagttttgag aagcaactgc gtatcctgct gcaaacggta aacagtacac atcagcgaca
    15181 tgccctggtg tttatcgatc ttgatcgctt taaagcggtg aatgacagcg ccgggcatgc
    15241 ggcgggtgac gctttactgc gcgaactggc gtcgttgatg ctgagtatgc tgcgctccag
    15301 cgacgtgctg gcgcgactcg gtggtgatga atttggtcta ctgttgccag actgtaatat
    15361 cgaaagtgcg cgttttatcg ctacacgcat tatcagtgcc gtgaatgatt atcactttat
    15421 atgggaaggc cgtgtgcatc gggtaggtgc cagtgccggg attaccttga ttgatgacaa
    15481 caatcatcag gcggcagaag tgatgtcgca ggctgatatc gcctgttatg cctccaaaaa
    15541 tggtggacgg ggccgggtga cggtttacga accacagcaa gctgccgcac atagcgaacg
    15601 ggcggcgatg tcgcttgatg aacagtggcg gatgattaaa gagaatcagt tgatgatgat
    15661 cgcccacggt gtcgcttcgc cgcggatccc ggaagcgcgt aatttgtggc tgatttcact
    15721 taagctctgg agttgcgaag gcgagattat tgatgaacaa aaatttcgtc gtagcttcag
    15781 cgatccggca cttagccatg ctcttgaccg acgggtattc cacgaatttt tccagcaggc
    15841 cgcaaaagcg gttgccagta aaggcataag catcgccctc cccctttccg ttgccggttt
    15901 gagtagcgcc acgctggtga atgatctgct tgagcagctg ggaaatagcc ctctaccacc
    15961 acggttatta catctgatta ttccggctga agcgatttta gatcacgcag aaagcgtgca
    16021 aaaactgcgg ctggtgggat gtcggatagt gctcagccag gtgggccgcg atctgcaaat
    16081 cttcaactcg ctgaaagcga atatggcaga ttacctgcta cttgatggtg agttatgcgc
    16141 caacgtgcag ggtaatttga tggatgagat gctgattacg attattcagg ggcacgctca
    16201 gcgactcggg atgaaaacca tcgccgggcc agtcgtttta cccttagtga tggatacgct
    16261 ttctggcatc ggcgtcgatc tgatttatgg tgatgtgatt gccgatgccc aaccgctgga
    16321 tttgctggtg aatagcagtt atttcgcgat taactgagag agcgtttgcc cattgcctga
    16381 tgcgacgtat caggcctaca attcgtccgt tccgtctggt tgccagcctt ccgtatacca
    16441 gatatgcaac agcgcataag aacgccaggg cttccagcgc tcggcataac ggcggatttg
    16501 tgccggtgtc atccccggaa atcgctgttt aatcagataa tcatccggca gaaaaacatc
    16561 tttcgcctgc cagccacgca aagcgaaata attcgccgtc cagcgcccga tacccggaaa
    16621 agtttgcagc gttttcatcg cctgctccac atcgcccgga attgtcattg gtaagctgcc
    16681 ctccagcgcc gcatttgcca gatgaatcag tgcctctgcc cgtttcaacg gcatgcctaa
    16741 cgcttttaat gcctgcgggt cggctgctgc cagccgctga ggcgtgggga agcagatata
    16801 ctccggaaaa tcatccagcc gttcgccata aagctgtaca actttggcag tcaattttgc
    16861 cgccatcgcc acgctcacca gttggcctaa aatcgcccgc acaccctgct caaaagcatc
    16921 aatacagccg ggtaaacgca atccgggccg cgccgcgcct aacttgccca acgcaccgtt
    16981 aacaatctgc gggttacatt gcagatcaaa caggcggctc attttcgcca gacactcagc
    17041 ggcaacgggt tctaaacctg cacttaaatt tatgtgcaga gtatggcggg ctatatccgg
    17101 aatagcagtc accacgccgc gatattcgcc caccgccaga ctacgggcat aataatcgtc
    17161 agcgaccgtt tccacaccac tcactgcacg ggcggcgaga aatcccaaca tccacgacca
    17221 gtcatacggc ggctgccagt tcagggtata catcgcatct ccttattcat ccgctttcag
    17281 cataaacgtt attcagacgc tacgctttgc tttcatattc cggttgtcgc gacggcaaca
    17341 tttcgctaaa gtcacgcccc ttcttcaccg gcatggggat tatttcgtgt ttattggttt
    17401 tgattacggt acagcaaact gttcagtggc ggtcatgcgt gacggtaaac cgcacttgct
    17461 aaaaatggaa aacgacagca cgctgctgcc ttcaatgctt tgcgcgccaa cgcgtgaagc
    17521 ggtaagcgaa tggctgtacc gccatcatga cgttccggca gacgacgatg aaacgcaggc
    17581 gttgttacga cgggcgattc gttataaccg cgaagaagat atcgatgtta cagcgaaaag
    17641 cgtgcagttc ggtctttcct cactggcaca gtacattgat gatccagaag aagtgtggtt
    17701 tgtgaaatca ccaaaatcgt tcctcggtgc cagcggctta aaaccgcagc aggtagcgct
    17761 gtttgaggat ctggtctgcg caatgatgtt gcacattcgc cagcaggcgc aggcgcagct
    17821 gccagaagcg attactcagg cggtgattgg tcgcccgatc aacttccagg ggctgggcgg
    17881 cgatgaagca aacgcccagg cgcaagggat tctggaacgc gcggcgaagc gtgccggatt
    17941 cagggacgtg gtattccagt atgagccggt cgcggctggg ctggattacg aagccacctt
    18001 gcaggaagaa aaacgggtgc tggtggtgga tatcggtggt ggtacgactg actgttcatt
    18061 gctgctgatg ggaccgcagt ggcgttcgcg tctcgatcgt gaagccagcc tgctgggtca
    18121 cagtggttgt cgtattggcg gtaacgatct ggatatcgcc ctggcgttta aaaacctgat
    18181 gccactgctg ggtatgggtg gcgaaaccga aaaaggcatc gccctgccga tcctgccgtg
    18241 gtggaatgcg gttgccatca acgacgtacc tgcgcagagt gatttctaca gtagtgccaa
    18301 cggtcgtctg cttaacgatc tggtacgcga tgcccgcgaa ccggaaaaag tggccctgtt
    18361 acagaaagtc tggcgtcagc gtttaagcta tcgcctggta cgcagcgcag aagagagcaa
    18421 aatcgccctt tcaaacgctg cggaaacccg cgcctcactg ccgtttatca gcgatgaact
    18481 ggctacgctg attagccagc aagggctgga aagcgccctc agccagccac tggcgcggat
    18541 tctggaacag gtgcaactgg cgctggataa cgcccaggaa aaaccggacg ttatatacct
    18601 gaccggcggt agcgcccgtt cgccgctgat taaaaaggct ctggcagaac agttgccggg
    18661 cattccgatt gcaggcggcg atgactttgg ctccgtcacc gccgggctgg cacgctgggc
    18721 ggaagtggta tttcgttaaa agaaaatggc tcagcagcgg cttaaatctg cctgcgcctg
    18781 agccagtttt tctgccgcct gacgtaacgg ttccatcaac ggcatggtcc gtgctggagc
    18841 ataaaggcgg aatcgctgca actctgtcgc gccgacagtc aacgccgatt ccagccgatg
    18901 tcgtttggcg gccattaccg cctgtctgtc tgctggcgtt accgcttcgt tcggcctgaa
    18961 cacaaaacgg cggtcacagc tcgctttcca gtcgataacc gcctgggtca gatggtcgcc
    19021 aaacccttta acttgcttaa cgccacgacg ggtaacatcc gctgctgttt caataccaaa
    19081 agaccgtaac gccgctttac gcgcagggcc aacgccggga atagaggcaa aaaatccctc
    19141 cagaaacttc tgcttctgcc gttcccttgc ggtgtcataa agtgctgcca gagcgcgttt
    19201 ctcctcttcc ggtaacccga gaatttcgtc cttcattttt tcgagcatcg cccgtttggc
    19261 gataaaacct tccagcccgc ccaactgttg gatctggctg actaaatgct catagtccat
    19321 tttcgcgcga ttaaatgcct cacggcgttg ctggatttct gctttgtaca ctttgcttgt
    19381 cagactgcca ataatccaga tagccgacag cacaggaacc aaaataatat aacgcggttc
    19441 tgcctgaagg ccgcaaagca acagcgataa cgctgacagt gcgatctcaa tcagaatgat
    19501 gtattcgcgc cgtaacaggc ctaaaggaag cggcctgcca gtcggttgga aatgatcggg
    19561 taatggcaat tgcaatgctg gcggtgctac tgacgccatc accatcgccc agactttcgc
    19621 cagcacaaaa tcaccgctgg tggtaatgac ctcttcaccg agatcaacaa aatagataac
    19681 gccttgatta tccagcgtac accacgggca gtcggtcaaa tgagcgggat aaacatgcat
    19741 tgccgaaacg ggacatttct ttaactgttg gcgcagagaa tcaagtgccg ctacccacgc
    19801 tttagccgtc ggacgcccgg ttgccacgcc actttccgtg aatgcctgct gaaacatggc
    19861 ttcaacatca ctcggtaaca tcgatagcgg aatcgatcgt ggcggcggtt ttaaaccacg
    19921 tcgctgatta tctgacgcgt aggcataacg gaaatgggta atatccgtct ccagcgcatt
    19981 acccgcatca gagataagcg gcacaccaga ataaggatgc cggccaccaa acaagacgtg
    20041 aaaaatcagc aacgcaaggc caaaattatc gtgattttct gtgcgttcaa agccgacaaa
    20101 tgacgacaag gtttgtagct ctggcggcgt aaaatgcgac acgccgactt cgcataaatg
    20161 cagtgtgcca ttgacgttaa tctgaaagga gtcgctatca atcagtacca ctttgctgtc
    20221 gcgacctacc ataaaactgt tctggtttac gtcacccacg acgtgcccgt gctcgtgaac
    20281 cgtagcaaaa gatgaagcaa tattgcgcgc aacatagagt agaaaatccc acgcacaatg
    20341 agggtaactc tggcgacgat gtgccgggct atagatcata tgaatcggtt ctttaccaga
    20401 aacttttggc atcataaaac cgataacttt tccgcctcgt ccaccgtgaa gcgttgcctg
    20461 cggccaggcg acataattca acaactgcgc gtcagctgtc gcagccataa aggcaagttt
    20521 gtcctgtttt gaggcgggtg gcggcgtgtg ataaatcttg gcgacgctat cgacaaactc
    20581 ctcgatatca taaaccgcgc cttcaccgcc tttgcccagt tcacggcctg gcgtaacgca
    20641 ctcaccagta gcagtatata aagtgggttt catggtaacc acagcgccag tgccaacgtt
    20701 ttatcatcat ccgtacgctc gtttaccgcc gggctggaca aaaactgctt taacaattca
    20761 ggtaataaat cgagttgttc ctgcgttact gacgccagtc cattgaaaaa cggggtaaag
    20821 aaaggcacat gaggagaatt atccagcata tttaacgcca gccgctgaat accatccgta
    20881 aatgctgcaa ctttatgcgc acgcccagtg ctggtgaaag tttccagtct ggaaacggca
    20941 tcttcgtcgg taatgaagtg cgtcatgttg gcatattcac ccaccatcgg cgtgagaggc
    21001 aattgcagac cgtgacccaa atctaccacc acgccgccat cgccaatctg cataatcaag
    21061 gtgccgtcag gcgatgaaat caatcccaga aacgtgcagg caaaatcgcg aactgctaat
    21121 gctttggctt ctgcctcggc aaaaagtcgt tgacgaatag tcagtaccat atttgtggcg
    21181 aggacatcat taagccccaa ttcaccgtcc tgtacttttt gcaccataaa cgccatcgct
    21241 tcattgacgg cgagcgtcgc gccttctcct ccctgcgaaa cgctacctgc gccatcagca
    21301 aggaacatca ccagtaatgg ttgctggtcg tttaaccaga caacctgcat ctggcaggca
    21361 tcctgacaag gcaaatcagc actaatgtgc gatgttccaa cagcggatgc ataaaccaga
    21421 cgccagctca cactgacgtc cagccttttg gcgcttccag cacaacttcc gttcccggcg
    21481 tggagcggga aaccgaacgc agcgaactgg ataaccagct aaacagttca cggaattgta
    21541 atccctgcag tggcaaaggc tgacgaacgc tgatttgtgc cagagtcttc atatccgccc
    21601 cctgaacacc gatggaaaag aaggcaaact tcttatcttc ttccccctga aacactttgt
    21661 tggcggcagc ctgccactca tcggttggag cgccatcggt gatcaggaaa atccacgggc
    21721 gataatacga aataccattt gcgcggtact cacgtttcct ctcttcaacc atatctaggg
    21781 ctttggtaat ggcggccccc ataggcgtat ccccctgggc aaacaggatg ggcgggaaaa
    21841 agttagcggc gctggtaaag ggttgttcca catgcaccgg gccgaacgtc acaatgccga
    21901 gttccactct ttttaaagcc agcggatcag caagcagttc atcacgaaag gtaaccaatc
    21961 cggcgttaag ttcattaata ggtctgccgc tcatcgagcc agaaacatcc agcagcaaaa
    22021 tgcaggggca acgtggttcc gggttactgg caaaatcgct ggtggcaaac gtgatttgtt
    22081 cgctcataag aaatcctttc ttagagaatt atcgaggtcc ggtatcatac cgattgcaat
    22141 aatgaaataa gagcaaacga agaaactttc agaattaggc ccgtcggcgc agaaaatttt
    22201 gctattcgcc tcgcaagaac ggagagccat cgattgacac taagggcgga gtgacataat
    22261 ttcaggagtg agggttaggg agaggtttcc ccctccccct ggtgttctta gtaagcctgg
    22321 aagctaatca ctaagagtat caccagtatg atgacgtgct tcatcataac cctttcctta
    22381 ttaaaagccc tcttctccgg gagaggcttt cccgtttcag cgtcccgctg aaatcatcgg
    22441 cttacctcct ttcgccctga atgcagtcta tcgctaacgc gtgaataaaa tagtttcctc
    22501 tgtgattatt gcgtaacgac tcgcaaagaa tatttgctgg caggatcgca gactacaaag
    22561 cctacggatt gacaatctta tcgtgaaggc atactttcag gagtgagggt agagcggggt
    22621 ttcccccgcc ctggtagtct tagtaagcgg ggaagcttat gactaagagc accacgatga
    22681 tgagtagctt catcatgacc ctttccttat ttaaggcccc ttcctcggga ggggctttcc
    22741 cgtttcagcg tcccgctgaa atcgtcggct tacctccttt cgccctgtat gcagtctatc
    22801 gctgacttgc ggataaaata gtttccagtg tgattattgc gtaacgtctc gcaaagaata
    22861 tttgctggca ggatcgcaga ctgcaaagcc tgcagattga caatcttatc gtgaaggcat
    22921 actttcagga gtgagggtag agcggggttt cccccgccct ggtagtctta gtaagctggc
    22981 cagctaatga ctaagagcac cacgatgatg agtagcttca tcatgaccct ttccttattt
    23041 atggcccctt cctcgggagg ggctttcccg tttcagcgtc ccgctgaaat cggcggctta
    23101 cctcctttcg ccatgcaagc agtctatccc taacgcgtag ataaaatagt ttcctgtgtt
    23161 attactggat gcgtgctcgc aaatgtgccc gtcattcaga caattcccga cagtgtttca
    23221 taattcctcc atttttctcc cttattggct ggctacacta gtatcattcc gcgaaacgtt
    23281 tcaggaagag aaactcttaa cgatgaaagg cagttataaa tcccgttggg taatcgtaat
    23341 cgtggtggtt atcgccgcca tcgccgcatt ctggttctgg caaggccgca atgactcccg
    23401 gagtgcagcc ccaggggcga cgaaacaagc gcagcaatcg ccagcgggtg gtcgccgtgg
    23461 tatgcgttcc ggcccattag ccccggttca ggcggcgacc gccgtagaac aggcagttcc
    23521 gcgttacctc accgggcttg gcaccattat cgccgctaat actgttacgg tgcgcagccg
    23581 cgtggacggt caactgatgg cgttacattt ccaggaaggc cagcaggtca aagcaggcga
    23641 tttactggca gaaattgacc ccagccagtt caaagttgca ttagcacaaa cccagggcca
    23701 actggcaaaa gataaagcca cgcttgctaa cgcccgccgt gatctggcgc gttatcagca
    23761 actggcaaaa accaatctcg tctcccgtca ggagctggat gcccaacagg cgctggtcag
    23821 tgaaaccgaa ggcaccatta aggctgatga agcaagcgtc gccagcgcgc agttgcaact
    23881 cgactggagc cgcatcaccg caccagtcga tggtcgcgtt ggtctcaagc aggttgatgt
    23941 tggtaaccaa atctccagtg gtgataccac cggaattgtg gtgatcaccc agacgcatcc
    24001 tatcgattta gtctttaccc tgccggaaag cgatatcgct actgtagtgc aggcgcaaaa
    24061 agccggaaaa ccgctggtgg tagaagcctg ggatcgcacc aattcgaaga aattaagtga
    24121 aggcacgctg ttaagcctcg ataaccaaat cgatgccaca accggtatga ttaaagtgaa
    24181 agcacgcttt aataatcaga atgatgtgct gtttcccaat cagtttgtta acgcgcgcat
    24241 gttagtcgac accgaacaaa acgccgtagt gatcccaaca gccgccctgc aaatgggcaa
    24301 tgaaggccat tttgtctggg tgctgaatag cgaaaacaag gtcagcaaac atctggtgac
    24361 gccgggcatt caggacagtc agaaagtggt gatccgtgca ggtatttctg cgggcaatcg
    24421 cgtggtgaca gacggcattg atcgcctgac cgaaggggcg aaagtggaag tggtggaagc
    24481 ccagagcgcc accactccgg aagagaaagc caccagccgc gaatacgcga aaaaaggagc
    24541 acgctcctga tgcaggtgtt acccccgagc agcacaggcg gcccgtcgcg cctgtttatt
    24601 atgcgtcctg tcgccaccac gctgctgatg gtggcgatct tactcgccgg gattatcggt
    24661 tatcgcgccc tgcccgtttc ggcgctgccg gaagtggact atccgaccat tcaggtggtc
    24721 acgctctacc caggtgccag cccggatgtc atgacctctg ccgttaccgc gccgctcgaa
    24781 cgccagttcg ggcagatgtc tggcctgaaa cagatgtcgt cgcaaagttc cggcggtgcg
    24841 tcagttatca ctttgcagtt ccagctaaca ttaccgctcg atgtcgccga gcaggaagtg
    24901 caggccgcga ttaacgctgc gaccaacttg ttgccgagcg atctgcctaa cccgccggtt
    24961 tacagcaaag tgaacccggc agatccgccg atcatgacgc tcgccgtcac ctcaaccgcc
    25021 atgccgatga cgcaagtgga agatatggtg gaaacccgcg tcgcgcagaa aatctcgcag
    25081 atttccggcg tcggcctggt gacgctttcc ggcggtcagc gtccggctgt tcgcgtcaaa
    25141 cttaacgctc aggcgattgc cgccctcggc ctgaccagcg aaaccgtgcg caccgccatt
    25201 accggcgcta acgttaactc ggcaaaaggt agcctcgacg gcccttcccg tgcggtcacg
    25261 ctttccgcga acgaccagat gcaatccgcc gaagagtatc gccagctaat catcgcctac
    25321 cagaacggcg cgccaattcg tctgggcgat gtcgcaactg tagagcaagg tgcagaaaac
    25381 agctggctcg gcgcgtgggc gaacaaagaa caggccattg tgatgaatgt tcagcgccag
    25441 cccggtgcta acattatctc caccgccgac agcattcggc agatgctgcc acagctcact
    25501 gagagtctgc cgaaatcggt gaaggtgaca gtgctttccg atcgcaccac caatatccgc
    25561 gcatccgtcg atgatactca gtttgaattg atgatggcta tcgcgctggt agtcatgatt
    25621 atctacctgt ttttgcgcaa tattccggcg accatcattc ccggtgttgc tgtaccgctg
    25681 tcgttaatcg gcactttcgc ggttatggtg tttctcgatt tttcaatcaa taacctgaca
    25741 ctgatggcgt taactatcgc caccggattc gtggtcgatg acgccatcgt ggtgatcgaa
    25801 aacatttccc gctatatcga aaaaggcgaa aaaccgttgg cggcggcgct caagggcgca
    25861 ggtgaaatcg gctttaccat tatctcgctg atcttctcac tgattgcggt gttgatccca
    25921 ctgctgttta tgggcgatat cgtcgggcga ctgttccgcg aatttgctat taccctggcg
    25981 gtagcgattt tgatctcagc ggtggtgtcg ctgaccctga caccgatgat gtgcgcgcgg
    26041 atgctcagcc aggagtcgtt gcgtaaacag aaccgcttct cccgtgcctc ggaaaaaatg
    26101 ttcgacagga taatcgccgc ctatggtcgt ggactggcga aagtgctgaa tcatccgtgg
    26161 ctgaccttaa gcgtggcact cagcacgctg ctgcttagcg tgctgctgtg ggtgttcatt
    26221 ccgaaaggtt tcttcccggt acaggacaat ggcattattc agggcacttt gcaggcaccg
    26281 caatccagct cctttgccaa tatggcccag cgacaacgcc aggtcgcgga cgtgattttg
    26341 caggatccgg cagtgcaaag cctgacctca tttgttggcg ttgatggcac taacccgtcg
    26401 ctgaatagtg cacgtttaca aatcaacctc aaaccgttgg atgaacgtga tgatcgggtg
    26461 caaaaagtca tcgcccgtct gcaaacggcg gtagataaag tgccgggcgt cgatctcttc
    26521 ctgcaaccaa cgcaggatct gactattgat actcaggtca gccgcaccca gtaccagttt
    26581 accttgcagg ccacctcact ggatgcgctc agtacctggg tgccacagtt gatggaaaaa
    26641 ctccagcaac tgccacagct ttctgatgtc tccagcgact ggcaggacaa agggctggtg
    26701 gcgtatgtca atgttgatcg cgacagcgcc agccgtctgg ggatcagcat ggcggatgtc
    26761 gataatgccc tgtacagcgc gtttggtcag cgactgattt ccactattta tactcaggct
    26821 aaccagtatc gcgtagtgct ggagcacaac accgaaatta ccccgggcct cgcgacgctg
    26881 gataccattc gcctgaccag tagcgacggc ggcgtggtgc cgttaagctc aattgccaaa
    26941 gttgaacagc gttttgcgcc gctttccatc aaccatctgg atcagttccc ggtaacgacc
    27001 atctccttta acgtgccgga taactattcg ctgggcgatg cggtgcaggc gattatggac
    27061 accgaaaaga cgctgaatct gccggtggat atcaccacgc aattccaggg cagcaccctc
    27121 gccttccagt cggcgctggg cagcactgtc tggctgattg tcgcggcggt ggtggcgatg
    27181 tatatcgtgc tcggcattct gtacgagagc tttattcacc cgatcaccat tctctcgacg
    27241 ctacccaccg caggggtcgg cgcgctgctg gcattaatga ttgccggtag cgaactggat
    27301 gtgattgcga ttatcggcat tattttgctg atcggtattg tgaagaagaa cgccatcatg
    27361 atgatcgact tcgcgctggc tgctgagcgc gagcaaggca tgtcgccgcg cgatgcaatc
    27421 taccaggctt gtctgttgcg ttttcgtccg atcctgatga ccaccctggc ggctctgctt
    27481 ggcgcgctgc cgctgatgtt gagtaccggg gtcggcgcgg aactgcgtcg tccgttaggt
    27541 atcggcatgg tcggcggtct gattgtcagc caggtgctga cgctgttcac cacgccggtg
    27601 atttatctgc tgttcgaccg cctggcattg tggaccaaaa gtcgctttgc tcgccatgaa
    27661 gaggaagcgt aagtgaagtt ttttgccctc ttcatttacc gtccggtggc gacgatttta
    27721 ctgtcggttg ccattaccct gtgcggcata ctgggcttcc gtatgctgcc ggtcgccccg
    27781 ctgccgcagg tcgattttcc ggtgattatg gtcagcgcct cgctgcccgg tgcgtcacca
    27841 gaaacaatgg cgtcttccgt tgccacgccg ctggagcgct cacttgggcg cattgccgga
    27901 gtcagtgaaa tgacctccag cagttcgctc ggcagcacgc gtattatttt gcagtttgat
    27961 tttgaccggg atatcaacgg cgcggcgcgc gatgtgcagg cggcgatcaa cgctgcacaa
    28021 agtttgctgc ccagcgggat gcccagccgt ccgacctatc gcaaagctaa cccgtcggat
    28081 gcgccaatta tgatcctcac gctgacatcc gatacttatt cgcagggtaa actgtacgat
    28141 ttcgcctcga cgcagctggc tccgacgatt tcgcaaatcg acggtgttgg tgatgtcgat
    28201 gtcggcggca gctcactgcc cgccgtacgc gtcgggctga atccgcaggc gctgtttaat
    28261 cagggcgtct cgctggacga cgtacgcact gccatcagca atgccaacgt gcgtaaaccg
    28321 cagggggcgc tggaagatgg cactcaccgc tggcagatcc agaccaatga tgagctaaaa
    28381 accgccgccg aatatcagcc gctgattatt cattacaaca acggcggcgc ggttcgtctg
    28441 ggcgatgtgg cgacagtgac cgactctgta caggatgtac gtaacgccgg gatgaccaat
    28501 gccaaaccgg ctattttgct gatgatccgc aagctgccgg aagccaatat tatccagacg
    28561 gttgacagca tccgggcaaa attaccggag ttgcaggaaa ccattccggc ggcgattgat
    28621 ctgcaaattg ctcaggatcg ctcccccacc attcgcgcct cgctggaaga agtcgagcaa
    28681 acgctgatta tctcggtggc gctggtgatt ctggtggtgt ttttattcct gcgctcgggt
    28741 cgcgcaacta ttattcccgc cgttgcggtg ccggtttcgc tgattggtac gtttgcggcg
    28801 atgtacctgt gcggtttcag tctcaataat ctttcgttaa tggcgctcac catcgctact
    28861 ggtttcgtgg tggatgacgc catcgtggtg ctggaaaaca ttgcccgtca tctggaagcg
    28921 ggaatgaaac cgttgcaagc cgcactgcaa ggtactcgcg aagtcggttt tacggtgctg
    28981 tcgatgagtc tgtcactggt ggcggtgttc ctgccgctgc tgttgatggg cggattgccg
    29041 ggccgactgt tacgcgaatt tgccgtgacg ctttctgtcg ccattggtat atcgttgctg
    29101 gtttctctga cattaacgcc aatgatgtgt ggctggatgc tgaaagccag caagccgcgc
    29161 gagcaaaagc gactgcgtgg ttttggtcgc atgttggtag ccctgcaaca aggctacggc
    29221 aagtcactga aatgggtgct caatcatacc cgtctggtgg gcgtggtgct gcttggcacc
    29281 attgcgctga atatctggct gtatatctcg atcccgaaaa ccttcttccc ggagcaggac
    29341 actggcgtgt tgatgggcgg gattcaggcg gatcagagta tttcgtttca ggcgatgcgc
    29401 ggtaagttgc aggatttcat gaaaattatc cgtgacgatc cggcagtgga taatgtcacc
    29461 ggctttacag gcggttcgcg agtgaacagc gggatgatgt ttatcaccct caagccacgc
    29521 gacgaacgca gcgaaacggc gcagcaaatt atcgaccgtc tgcgcgtaaa actggcgaaa
    29581 gaaccggggg cgaatctgtt cctgatggcg gtacaggata ttcgcgttgg tgggcgtcag
    29641 tcgaacgcca gctaccagta cacgttgtta tccgacgacc tggcggcact gcgagaatgg
    29701 gagccgaaaa tccgcaaaaa actggcgacg ttgccggaac tggcggacgt gaactccgat
    29761 cagcaggata acggcgcgga gatgaatctg gtttacgacc gcgacaccat ggcacggctg
    29821 ggaatcgacg tacaagccgc caacagtctg ttaaataacg ccttcggtca gcggcaaatc
    29881 tcgaccattt accagccgat gaaccagtat aaagtggtga tggaagtgga tccgcgctat
    29941 acccaggaca tcagtgcgct ggaaaaaatg ttcgttatca ataacgaagg caaagcgatc
    30001 ccgctgtcgt atttcgctaa atggcaaccg gcgaatgccc cactatcggt gaatcatcag
    30061 ggattatcgg cggcctcgac catttcgttt aacctgccga ccggaaaatc gctctcggac
    30121 gccagtgcgg cgatcgatcg cgcaatgacc cagcttgggg tgccttcgac ggtgcgcggc
    30181 agttttgccg gcacggcgca ggtgttccag gagacgatga actcgcaggt gatcctgatt
    30241 atcgccgcca tcgccacggt gtatatcgtg ctgggtatcc tttacgagag ttacgtacat
    30301 ccgctgacga ttctctccac cctgccctcg gcgggcgttg gagcgctgtt ggcgctggag
    30361 ctgttcaatg ccccgttcag cctaatcgcc ctgataggga tcatgctatt aatcggcatc
    30421 gtgaagaaaa acgccattat gatggtcgat tttgcgcttg aagcccaacg gcacggtaac
    30481 ctgacgccgc aggaagctat tttccaggcc tgtctgctgc gttttcgccc gattatgatg
    30541 accaccctgg cggcgctgtt tggtgcgctg ccgctggtat tgtcgggcgg cgacggctcg
    30601 gagctgcggc aacccctggg gatcaccatt gtcggcggac tggtaatgag ccagctcctt
    30661 acgctgtata ccacgccggt ggtgtatctc tttttcgacc gtctgcggct gcgtttttcg
    30721 cgtaaaccta aacaaacggt aaccgagtaa atgacagatc ttcccgacag cacccgttgg
    30781 caattgtgga ttgtggcttt cggcttcttt atgcagtcgc tggacaccac catcgtaaac
    30841 accgcccttc cctcaatggc gcaaagcctc ggggaaagtc cgttgcatat gcacatggtc
    30901 attgtctctt atgtgctgac cgtggcggtg atgctgcccg ccagcggctg gctggcggac
    30961 aaagtcggcg tgcgcaatat tttctttacc gccatcgtgc tgtttactct cggttcactg
    31021 ttttgcgcgc tttccggcac gctgaacgaa ctgttgctgg cacgcgcgtt acagggcgtt
    31081 ggcggcgcga tgatggtgcc ggtcggcaga ttgacggtga tgaaaatcgt accgcgcgag
    31141 caatatatgg ctgcgatgac ctttgtcacg ttacccggtc aggtcggtcc gctgctcggt
    31201 ccggcgctcg gcggtctgct ggtggagtac gcgtcgtggc actggatctt tttgatcaac
    31261 attccggtgg ggattatcgg tgcgatcgcc acattgctgt taatgccgaa ctacaccatg
    31321 cagacgtggc gctttgatct ctccggattt ttattgctgg cggttggcat ggcggtatta
    31381 acccctggcg ctggacggca gtaaaggtac aggtttatcg ccgctggcga ttgctggcct
    31441 ggtcgcagtt ggcgtggtgg cactggtgct ttatctgctg cacgccagaa ataacaaccg
    31501 tgccctgttc agtctgaaac tgttccgtac tcgtaccttt tcgctgggcc tggcggggag
    31561 ctttgccgga cgtattggca gtggcatgtt gccctttatg acaccggttt tcctgcaaat
    31621 tggcctcggt ttctcgccgt ttcatgccgg actgatgatg atcccgatgg tgcttggcag
    31681 catgggaatg aagcgaattg tggtacaggt ggtgaatcgc tttggttatc gtcgggtact
    31741 ggtagcgacc acgctgggtc tgtcgctggt caccctgttg tttatgacta ccgccctgct
    31801 gggctggtac tacgttttgc cgttcgtcct gtttttacaa gggatggtca actcgacgcg
    31861 tttctcctcc atgaacaccc tgacgctgaa agatctcccg gacaatctgg cgagcagcgg
    31921 caacagcctg ctgtcgatga ttatgcaatt gtcgatgagt atcggcgtca ctatcgccgg
    31981 gctgttgctg ggactttttg gttcacagca tgtcagcgtc gacagcggca ccacacaaac
    32041 cgtctttatg tacacctggc ttagcatggc gttgatcatc gcccttccgg cgttcatctt
    32101 tgccagagtg ccgaacgata cgcatcaaaa tgtagctatt tcgcggcgaa aaaggagcgc
    32161 gcaatgaagt tctggcgacc cggtattacc ggcaaactgt ttctggcgat tttcgccacc
    32221 tgcattgtct tgctgatcag tatgcactgg gcggtgcgta tcagttttga gcgtggcttt
    32281 attgattaca tcaagcatgg taatgaacag cgattacaac tgttaagtga tgcgcttggc
    32341 gagcagtatg cgcagcatgg caactggcgc ttcctgcgca acaatgatcg ctttgtcttt
    32401 cagatcctgc gttcatttga acacgataat tcggaagata aacccggccc gggtatgcca
    32461 ccgcacggct ggcgtaccca gttctgggtg gttgatcaaa acaacaaagt gctggttggt
    32521 ccgcgagcgc cgattccacc tgacggtaca cggcgaccca ttctggtcaa cggtgcggaa
    32581 gttggcgcgg tgatcgcctc ccccgttgag cggttaacgc gcaatactga tatcaatttc
    32641 gataaacaac agcggcaaac cagctggttg attgtcgccc tggcaacgtt actcgcggca
    32701 cttgccactt ttctgctggc gcgcggttta ctggcaccgg taaaacgact tgtcgatggc
    32761 acgcacaaac tggcggcggg cgatttcact acccgcgtaa cgcccaccag tgaagatgaa
    32821 ctgggcaaac tggcgcaaga cttcaaccag cttgccagca cactggagaa aaaccagcaa
    32881 atgcggcgcg attttatggc cgatatttct cacgaactgc gtacgccatt agcggtgctg
    32941 cgcggtgaac tggaagccat tcaggatggc gtgcgtaaat tcacgccgga gacggtggcg
    33001 tctttacagg cggaggtcgg tacactgacc aaactggttg acgatctcca tcagttgtcg
    33061 atgtctgatg aaggcgctct cgcctatcaa aaagcaccgg tagatttgat cccactgctg
    33121 gaagtggcgg gcggcgcatt tcgcgaacga ttcgccagtc gtggcctgaa actgcaattt
    33181 tccctgccag acagtattac cgtatttggc gatcgcgacc gtttaatgca gttattcaat
    33241 aatttacttg aaaacagcct gcgctatact gacagcggcg gcagcctgaa aatctctgcc
    33301 gagcagcacg acaaaacggt gcgcctgacc tttgccgaca gtgcgccagg tgtcagtgac
    33361 gagcagctac aaaaattatt tgaacgtttt tatcgcaccg aaggttcccg caaccgcgcc
    33421 agcggtggtt ccgggctggg gctggcgatt tgcctgaaca ttgttgaagc acataatggc
    33481 cgcattattg ctgcccattc gccttttggc ggggtaagca ttacagtaga gttaccgctg
    33541 gaacgggatt tacagagaga agtatgaccg agttaccaat cgacgaaaac acaccacgta
    33601 ttttgatcgt ggaagatgaa ccgaagctgg ggcagttgct cattgattat ctgcgtgctg
    33661 cgagctatgc gccgacgctt atcagccacg gcgatcaggt actgccgtat gtgcgccaga
    33721 caccaccgga tctgatcctg ttggatctga tgctccctgg caccgatggc ttgacgctgt
    33781 gccgggaaat tcgtcgtttt tctgacattc ctatcgtgat ggtgacggca aaaatcgaag
    33841 agatcgaccg cctgctcgga ctggagattg gcgcagatga ctacatctgc aagccgtaca
    33901 gcccacggga agtggtagcg cgcgtcaaaa ccattttgcg ccgttgcaaa ccgcagcgcg
    33961 aattgcagca acaggatgcc gaaagcccgt tgattatcga cgaaggtcgt tttcaggctt
    34021 catggcgcgg taaaatgctt gacctgacac ctgcggaatt tcgtctgttg aaaacgctct
    34081 ctcatgaacc aggaaaagtg ttctcccgcg agcaattgct caatcatctt tatgacgact
    34141 accgcgtagt aaccgaccgc accattgaca gccacattaa aaacctgcgc cgcaagctgg
    34201 aatctctcga cgccgaacag tcatttatcc gcgccgttta cggcgttggt taccgctggg
    34261 aagccgacgc ctgccgcatc gtttagtttt agcgacatga ctttgttagc cggagatggc
    34321 gttcagacca gatccggcaa cattatccca cgcatggtca gcaaactgac attatctctc
    34381 cgccctggca ggcatcagaa aatcgctcat actttaatcg gtaaacagca cctttagatg
    34441 ctgttttcga tacgcaattt caatcaagga gtcattatgg ctggttggtt tgaactcagt
    34501 aagagcagtg ataatcagtt ccggtttgtg ctaaaagcgg gcaatggtga gactatcctc
    34561 accagcgagc tgtatacatc aaaagcctct gcggaaaagg gcatcgcgtc agtgcgtagc
    34621 aacagcccgc aagaagaacg ctatgagaaa aaaacggcaa gtaacggcaa attctatttc
    34681 aatctgaaag ccgccaatca tcaaattatc ggctccagcc agatgtacgc caccgcgcaa
    34741 tctcgtgaaa ccggaattgc ctccgttaaa gccaatggca caagccagac ggtgaaagac
    34801 aatacgtaat tacgatgccg ggcgtgggtt gttggcgtcc ggctttattt tctctcatca
    34861 cagagttact atccctcaag aaattattaa ccatgaaatg agttttctcc tcataactga
    34921 taaggaaaat tatgctcaaa ggattgcgta cattattttc acgcagggtt ttgtttaacg
    34981 tcgaaatgaa taattctgtt gactgtgaat tacttctcat ccagcaacaa ctccaggcat
    35041 tgatagccga accaggcaat tatttagcac atgattgtga tctcaacgat actctggttc
    35101 tttgccagct tacccatcat cacaatggat atatacgaga aaaggccgtg cagtatctgg
    35161 ggcacaaaga ggatgttgcg gctatagaag aattattact tgcagctaat gactgggtaa
    35221 aagaggttcg ccttgctgca accatagcat tacgtcattt aatgaaggat aagaatgcag
    35281 cggcatttgc cgttaatcta cccatgatac gtaaccttct ccaatgccag cgttacgatc
    35341 accgtgcatt tgtagacgag atacttagat atttattgac agaaaataac cgcccacaat
    35401 taacgtattg gcttacttgc cctgataaaa agctctcccg cgcggtatta caaacgctga
    35461 ttgaatacgg ttactttaat gatgaatctt cactgctttc aatactcgat aaacccgatg
    35521 agggtttgcg aatgctggcg accacccact ggctgcgtca acaattacca ttaagcgaag
    35581 cggtattaac tcgtctgtta aaagaccgct ggccgcgtat tcgacaagca acgttattta
    35641 gcctcactga ccgagcaata gaaatgcctc cggcgttgca cagcacatta ctgctggata
    35701 acaatatgtt gatccgccta cgcgctaaaa atatgcttca cgaagtcatg gatgttccgc
    35761 aattctggcg tcatgttgtc acttctgcgg aatatactcc ctcacagcga cgggccgctt
    35821 tatacgggct ggattccatt catgatccca atattttaaa actggcagaa tggggattat
    35881 cacagaatgt attcccactg cgtttagccg ctatgcacat tcttgcaaaa gctaatcctc
    35941 gttgtggcgt caaagagact attctgacca cgctggctaa cccggacgcc gccgggttgc
    36001 gatttatggt taacatctgt gtatggtgtc gcgttccgct cacgttcgag gaaatacgtc
    36061 agttgcagga aaacgcgccg tcagttaaac atgcttgcgc atattgtcgg ctgtatcata
    36121 acttgaacaa atgggacggt ttaattcttc ttcttcaatc gcaacacaag ctaactgaag
    36181 aatttgcagg taaacagctc gcgatatggc aacgcaattt caatctttcg ggcattcaac
    36241 cgaatgctct tcagcgtcag caacttcagg cgctttttac ccgcaatccg gaacttcaca
    36301 acagattatg gggttacatt ccttttaaat aacttcgaat tatagactta cgatgacaaa
    36361 tgtacctgct gacgagcgga accaaaacga aacaatacgt gaagctttac gcttgctacg
    36421 agaaaaactt gccgagggac tacgcagtgg cgaagcccaa ccgtgggaaa aggatctgtt
    36481 tttacataaa gtgaaggccg gtaacaaata aatcccccag tcttttccct cacatttgca
    36541 ctggagccaa ccccgccgat tgcgctacaa tgcccgccct taaagtgggg gcactcccct
    36601 aaccgcttca tcaggtgaag cggatctgac ctgtcatcag aacgagagaa ttatgtttaa
    36661 accggaactc ctttccccgg cgggaacgct gaaaaatatg cgttacgctt tcgcttatgg
    36721 cgcagatgct gtttatgcgg gccagccgcg ttactccctg cgtgtgcgca acaacgaatt
    36781 caaccacgaa aatcttcagc tcggcatcaa tgaagcccac gcgctgggga aaaagtttta
    36841 tgtcgtggtc aacattgcac cgcacaacgc caagctgaaa acctttatcc gtgacctgaa
    36901 accggtggtg gaaatggggc cggatgcgct gattatgtcc gatccagggc tgattatgct
    36961 ggtgcgtgag tacttccctg aaatgccgat ccacctctcg gtgcaggcta acgccgtaaa
    37021 ctgggcgacg gtgaaattct ggcagcaaat gggcctgacc cgcgtgatcc tctctcgcga
    37081 actgtcgctg gaagagattg aagagatccg caatcaggtg ccggatatgg agatcgagat
    37141 cttcgttcac ggtgcgctgt gcatggccta ctccggtcgc tgcctgctct ctggctatat
    37201 caacaagcgc gatccgaacc agggtacctg caccaacgcc tgccgctggg agtacaacgt
    37261 ccaggaaggg aaagaagatg acgttggcaa catcgtacac aagtacgagc cgatcccggt
    37321 gcaaaatgtt gagccgacgc taggtatcgg cgcgccaacc gacaaagtgt ttatgatcga
    37381 agaagcccag cgtccgggcg agtatatgac cgcgtttgaa gatgagcacg gcacttacat
    37441 catgaactcg aaagatctgc gcgccatcgc ccatgtagaa cgcctgacca aaatgggcgt
    37501 gcattcgctg aaaatcgaag gccgtactaa atctttctac tattgcgcac gcaccgcaca
    37561 ggtttatcgt aaagctatcg atgatgccgc tgcgggcaaa ccgttcgata ccagcctgct
    37621 ggaaactctg gaaggtctgg cgcatcgtgg ctataccgaa ggtttcctgc gtcgtcatac
    37681 tcacgacgat tatcagaact acgaatacgg ttattcagtt tctgaccgcc agcagtttgt
    37741 tggtgagttt accggtgagc gcaaggggga cctcgcagcg gtagcggtga aaaataaatt
    37801 ctccgttggc gacagccttg agctgatgac gccgcaaggc aacattaact ttacccttga
    37861 gcacatggaa aacgccaaag gtgtagcgat gccggtcgca ccaggcgatg gttatactgt
    37921 gtggctcccg gtcccgcagg atcttgaact aaattacgcg ctgctgatgc gtaatttctc
    37981 cggggaaacc acgcgtaacc cacacggtaa gtgattaatt tcgattattt ttcccggatg
    38041 gaaaattctt agaaaccgat cacatacagc tgcatttatt aaggttatca tccgtttcgc
    38101 tgaaaaacat aacccataaa atgctagctg taccaggaac cacctcctta gcctgtgtaa
    38161 tctcccttac acgggcttat tttttatgca taagccctat ccctggtcac cgtcttccat
    38221 tgaccacatc gatagaatct cccttcatag cacgatgcct ttcacgtaac ggcatcgtgc
    38281 tcgcacaggt tccggctaag cacaaccaga acgcgcatgt ttgatgctta ccaaaaaata
    38341 ttctcactct ccacatttga atgtcagacg agcgacacca tgtaatccta caccttctgt
    38401 cttcagctca actatttgca tttttttgcc ctgagtaaca cagaaatgag ttgcatcatt
    38461 ttttactata ttttctgcac cagatattct actcctggct aaagaagctt cggcttcggt
    38521 gtagtattgg ttatcgagtt tacgctgaat attactttta tatgcaagac caaatttacc
    38581 gatacttgtc tcatcattat gcacagcaca accagacata ataaaaatac taattaatga
    38641 tatagcagct atctttttca tctcaccttt ccccattaaa taccaacgac actctctagt
    38701 gtttaaatat aataatggct gatcattata tttgaatagg attataataa atgttctgta
    38761 caacatttcc tacataagta ggacttacag acatgaaggc cctttccagg taactccatg
    38821 gggctttaat atatttggaa tagtatattt aagatgccac tgtttggttg aatattaggc
    38881 atatgctctt ttttgaaatt tatcggtggc taccgttaat attcgctgtt cccattgcaa
    38941 gctcctggtg gtaaccactg aatcctccat acttgaactg actttttatc ctccgacttt
    39001 catcctgttc tgactccacc ttttcttttc tgctctacac tatctacaga ccaatcataa
    39061 aggcacatac gatcatggca gaatttcccg ccagcttact gattcttaat ggcaaaagta
    39121 ctgacaatct acccttgcgc gaagcaatta tgctgttgcg tgaggaagga atgacgatcc
    39181 atgtgcgggt cacctgggag aaaggtgatg ccgcacgatt tgtagaggag gcccggaagt
    39241 tgggcgtcgc aacggtaatt gccggtggtg gcgatggcac cattaatgaa gtttctacgg
    39301 cgttgattca gtgtgagggg gatggcatac ccgcgctggg aattttgcca ttaggaaccg
    39361 ccaatgattt tgccaccagt gtagggattc ctgaggcact ggataaggcg ctgaaactgg
    39421 caattgccgg taacgccatt gcgatagata tggcgcaggt caacaaacaa acctgtttta
    39481 ttaatatggc gacaggcgga tttgggacgc gtattaccac agaaacgccg gaaaaattaa
    39541 aagccgcgct gggtggcgtc tcttacatca ttcatggctt aatgcgcatg gatactctgc
    39601 aaccggaccg ttgtgaaatc cgcggtgaaa actttcactg gcaaggtgac gccctggtat
    39661 tggtattggt aacgggcgtc aggccggtgg cggtcagcaa ttgtgtccga acgcgttaat
    39721 taacgatggc ttgctgcaac tgcgcatttt taccggcgat gaaattcttc cggctctcgt
    39781 atcaacctta aaatctgacg aagataaccc gagtattatc gaaggcgctt cgtcgtggtt
    39841 tgatatacaa gccccacacg aaatcacttt taatcttgat ggcgaaccgt tgagcggaca
    39901 aaactttcat attgaaatac ttccggcggc gttgcgttgt cgattaccac cagattgtcc
    39961 attattgcgt taatcaaact attctctctt gaaccaggga gaatccgaaa tgccggatgc
    40021 ggtgtaaata ccttatccgg catacagaac aatactacac cgtaattaat tttacccgtg
    40081 tcttctgcaa tgccagttta tccacctctg atacagcatc atcggtaata ataatgtcaa
    40141 ttttttcgat tggcagtacc tgattaaaac cgcgacggtt aaatttcgat gaatcgagaa
    40201 cggcaatcac tttattagcg gctgtgacca tcgcaccgct aacggaataa ccctcattaa
    40261 aggtcgtaat accattaacc gcatcaatac catcagcacc gacaaacatt aaatcggcat
    40321 taatatcctg cagggaacgt tcagcaatag atccatgcat agatcgcgtt ttatggcgga
    40381 ccgtgccacc gcagacgacc agagtaatgt ctttattttc ggaaagggca aacgctgccg
    40441 ggagactgtt ggtaatcacc gtgatatttt tagcggtcat taatccttcg gcgataagca
    40501 ttgtggtact tccgctgtcg agaataacgg tcatcccttc atggatcatt ttgactgccg
    40561 cctgcgctat tctgtttttt ggcgcgctgg cgagctgaaa tcgctcttta aacccgactt
    40621 cctgggtctc ggtttcacta ttaccggaca ttattttcgc cgcaccgcca tgaaagcgcg
    40681 taaccacgcc tttttgttcg agaaagcgca aatcggcacg gattgtcgct tccgaggcag
    40741 caaatactcc cgccagatcc tgaacaagca cggttccctg ttcattcact aattggatga
    40801 tcttattcct tcgctcgaat gaattcatcg tcatttaccc atattcaatt gtggctagtg
    40861 taaacgaagg gggaccattg gtgaatgatc tgttttgcac aataccgggc cagcatcacg
    40921 ctggcccgcg gtttcatgga atgagcaaca ctttgcccgg catggcatta cgagcgatgt
    40981 cacgcaccgc ctgggtgaag ctttcaaagc ttccacggtg agcgattaat ggctccaggc
    41041 ttaacttacg ttctgtcagc aaccggctcg ccgtttccca ctcctgcccc ggccaagggc
    41101 tggaatagtt catccaactg ccgataaccg tcagctcttt acgcaatatt ttgccaaacg
    41161 ttgccgatgt taaatgcaga tcctgatgca acgtgcccac cagcgccagt tgggcatgag
    41221 gaccggcaat ctctaccgcc agttcgacag tttgcggtac gccagccgtc tcgaggataa
    41281 gctgattaaa acgcagttcg cgtaaaacgc tctgcatttg cggcgcgctc atttcgctac
    41341 tgttaaatgt ttgcatcgaa ccgaaagatt ttgccagtgc cagtttttct gagctaatgt
    41401 cgatagccgt cacactcttt gctcccagcg cgacagcgca ctgaatagcc agcaggccaa
    41461 tggttccggc accaataata ataacgtttt tattctcaca accttgcgct aaatgaaaag
    41521 catgcagacc aatggtaatc ggctcaataa aagccccatc ctcaataggc atatccgtgg
    41581 gtagagcaaa gacatttttt cgcttaacga caatatattc agcaaatcca ccatcacgcc
    41641 gcgagccaat aaaatcatat tttgcgcact gggaataaaa ccctttcaga cactctggac
    41701 aagtaaaaca gggtaataac ggcacacagg caaccgcatc gccagggtgt aaatcatcaa
    41761 caccggatcc caccgcatca atatagccgc taaattcatg gcctaacgtt attggataat
    41821 aatgtgcacc atttttaaat atcctgggta aatcggaacc acataagccc gagctggcaa
    41881 tttttacccg cacctcatcc tgatgtttaa tttcaggaat gacgctttct gcaacgcgca
    41941 cgataccatc agtatcattc accactgatt tcataaaaac tcctgattgt taagggggat
    42001 aaactccccc tcagttaaaa attattctgc gagaacggct ttctcttgtt taataaaacc
    42061 acgcgctcta cgccaggtaa tgaaaatacc ggtcagataa attgcgccga taataatgaa
    42121 accgggaata ttttgcgggg agaaaacctg aatcagtaac caggtaatgg gagaaccgcc
    42181 ctgatccatt gaagccacca tacccccggc ttttaacgcc ccagcattag ccgccagttg
    42241 ggtgtgcaaa ccaatagttt gcgtcgcgat ccacagagtg atgctcatga tgatgacacc
    42301 cgagattaag gtgcggaaca gatttccacg atgcacggcg actgccatcg ccacaaagaa
    42361 gccgatggtg gcaagatcgc caaacggcag tacctgatta cccggaacac aaacagcaat
    42421 taaaatggtg agcgggataa aaatcaggct taccgatacc accgccgtat gccccagcag
    42481 taatgcggga tccaagccaa tcaggaactc ctgaccgccg aacttcgcct gtaaacgact
    42541 acgggcctgc ttagcgatgg gcgttaaacc atccatgatg ggtttaatca cccgtggcat
    42601 tagcagcatc actgccgccg tttttaccgc cagctgcaat acacctttga catcgtaacc
    42661 cgcgaggatg ccgataatca gccccatcac aaaacccacg gtgacaggtt cgccaaaagg
    42721 gccaaatttg cgctgaatat catcggcgct aaatttaatt cggttaacgc ctgggatttt
    42781 ctcgatgata gcatcgacca gcaccgcaat cggccccata tacgccgacg taccgtgcgg
    42841 aatagcaata ccttccagct caaagaaatt tcgggtatcg cgggcaaacc agtcgccgag
    42901 cttataaaca aacgccgcgt gaattaccac acccgccatc cctatcatcc atgaaccggt
    42961 tgccagatgc agcaacgcgc cggtgaaagt catatgccag atattccaga tatcaatatt
    43021 taccacccgc gtcatacggg tcagtaacat cgccacgtta accagaatag caatcggaat
    43081 cgccaccagc gcaatttgcg acgcccaggt cattggtgaa gagcccggcc agccgacatc
    43141 gaccacatgc agattcaggt cgaaattttc cgccatcgct ttcgccgccg gaccaatgga
    43201 atccagcatt aagccaatca caaggccaat gccaacaaag ccaatcccta tatgaagacc
    43261 cgctttaaag caatcgcctg ccttcatgcc taatatttta gaaaaaataa tgatgacaat
    43321 cggcagcatc accgtagggc cgaggtcgag aatataacgc atgacttctg aaaacatagg
    43381 tcacccctgt aagatagtca gaattttatt ttgtaatgct tcgataccga caccagaaac
    43441 aaaaggcatg ccgtgaacta acggaatatc gccaaaacta cgatccaccc tggcagtagt
    43501 gcatatcaaa tgcacgccat ccatataggt ttctatttca ttaacccgac actggattaa
    43561 ttcaacagga atattatgat tctgacacaa ttctttaatt tcttccgccg ccatcgtaga
    43621 ggtcgcaacc gcgcctccgc aagcgacaat aatcttgcgt ttcataaata gtccttttta
    43681 ttgttacaga gggatttatt cgtctgaatc taaaacatac tttgtgaagt attcctttaa
    43741 ctgggtttca ggaagagtga ttagtgtctc gacgatatcg ggctgttgta acttgccaaa
    43801 taaacagcgt aaaagtttca attgctgctg cggattttcc acaatcaacg caataaccaa
    43861 cgatacctcc acgtcgttat catcatccgc ttgctgaaaa tgaactttat ttgttggcct
    43921 taacagataa atggctgacg acttagcatg aatcgcctca caatgcggta ttgcaatggc
    43981 gtgctgctca agcattatcc cggtagggaa ttctgcttct ctggcaatta atgcctgtgg
    44041 ccaggtatca tgaaccacac ctttggcgag catctcatta ccgatatggg ttaaaacttc
    44101 gctacgatcg acaaaagaaa ttccgctacg aacaaacagg ttagtcatat accgtcctta
    44161 ttccgcacag ccgtagcgat aggcgcgcaa aacatcataa attttatcca taatcagctg
    44221 atgcggtatt gctgataatt ccccggactg aatgcgttca aattgtttgg gaagatactg
    44281 actaatcatg cccagtggga tgtccacgcc ttcaagattc accatcatcg tttcgacgct
    44341 atttttaatc cgactatgcg gccagtaata acgaatacga tccgacaggc tgtaacgaat
    44401 atccagtaat gaatcgttaa aacccgtacg ataatatttt ttccagtatt gcggttcgtc
    44461 gagcatcact tcttcaatta ccgccaggca accgctgcga ttttcagggg cgataagttc
    44521 ctgctcaatt tgtgccagtg caaatatcgc ctcgcgtaaa gcaaaggtta atgcgggacc
    44581 gactttcaat attgcaaagt gatcgcggac taattcccaa taagccgtcc gggtctggta
    44641 atcggtagaa tgtgcttcat aaaccattcg ggtgttttct atccattgcg ccagcggctg
    44701 cgcttcctgc ggctgataat ggataatatt gctgtgatca aattccacgc ccggctgcac
    44761 cacgatggca atcacgcgtg ttaacgcctc tgtcagccca cggacaataa aggccttttg
    44821 atgcgtacgt aaagtattgg cggcatcttc aacatgggtg atgtgtactg actgaatggc
    44881 gctggcctca ccgcccggaa ccggaacttc ggtgccaatg acatagctca gttgctcacg
    44941 ctggcaatct gtcgccacac tttccgcagc aaagcaaagc acagcagctc gttccgcaac
    45001 cgtttctggt gctaacggta tgggatcccc cgcgcaggac attgacgcat caagatgaat
    45061 tttactgaag ccggcacgaa catattcctt taccagctcg acggattttt ccatcgccgc
    45121 atccgcattt tcttgctgcc agcagtttgg ccccagatga tcgccgccga gaataatgcg
    45181 ttcgcgtgca aacccaactt tatcggcaat cgtaaaaaca aattcgcgaa agtctgccgg
    45241 tgtcattccg gtataaccgc caaattgatt gacctggttt gacgttgctt caatcagcac
    45301 tttgcgcgtg ctgttgcgat caaatgccag cgccgcttcg ataaccaacg gatgggcaga
    45361 acagactgaa catatgccga tatgttcacc agctttatgc cgggcaatta acgttttcat
    45421 gttttttcct tattaaatgg caggtgcgtt atgccctgcc ctcgcagcca caatcggcaa
    45481 tcactttgct caccacatcg cgcattgcgg atttagccga ctgcaaataa tcccggggct
    45541 cggtcgcttc agggtgctcg gtcaggtaat tttttaacgc ctgcgagaag gcatttttca
    45601 gctccgttgc aacgttgatt ttgcatatcc ccagtttgat ggtttgctga atatccttag
    45661 tcgataaccc tgacgcgcca tgcagcacca gcggtaagtt cacccactgg cgaatgttct
    45721 ccagtctaga aaaatcaagc gccggtgcgc tggcatacat cccatgagcc gtgccgatgg
    45781 cgaccgccag ggaatcaatt ccggttgcct cggcaaattc acgcgcctga gcggggttgg
    45841 tataaaaagc atcggcttca ttgacttgca catcatcttc ctggccgcca agttgcccca
    45901 gctccgcttc gacgctgaca tcaaagcgat ggcaaaaatc caccacctct ttgacccgtg
    45961 aaatattttg cgcaaaaggc aaatgcgagg cgtcaatcat gactgagcgc acgccagaac
    46021 gaaccttctg agcgatatcg tcaaatttcg tgtgatggtc gagatgaatt gccagtggat
    46081 ggtgatattg cttcgccatc gcgctgacca gcgccaacag attttctgta ccagcatgag
    46141 taaatgtgcc aggcgttccg gcgatgatga ccggcgcatg caggttggca gcggtttcca
    46201 ccaccacttg catcgtttcg agattgtgaa tattgaatgc cggaaccgca taaccgccgc
    46261 gctgtgcgtt gttcagcatc tgctttgtcg ataccacgtg cattttcata tcctgtcgtt
    46321 tgttttcgtt ttcaaaatat aatgaaatta tttgttttta aatatcgaga taacgatcac
    46381 aaaaacgaca atatgaaaat tattcgagga gtgaaaggca aaaaaacggc ctcccgatag
    46441 ggaagccgta gcaaagtgcg cgtgttttta tgccggatgc ggtgtaaaca tacgtggcag
    46501 tgctatgtag gcatgataag acgcttccgc gtcgcatcag gcataggttg ccggatgcag
    46561 tgtaaacgcc ttatccgtcc tacggggtgg tgttgttcgt ataaggcgta tcaggcaata
    46621 gtaattttgc tatcgagata aacgtcctgc acggcgttaa tcagtttcac gccgtcagcc
    46681 atcgatttct tgaacgcctt acgtccaaga atcagcccca ttccgccagc gcgtttgttg
    46741 ataaccgcag tacgcactgc atcactgagg tcagtttcac cgcctgcagc accgccggag
    46801 tttatcaacc cagcccggcc catatagcag ttagctaact gataacgcac cagatcaatc
    46861 gggttttcgc tggttaactt gctgtacacg cgatcgtcgg tataaccgta attaatcgct
    46921 ttatagccgc cgttattttc cgccattttt tgtttgacga tatctgcgcc gatggttgcc
    46981 gccagatggt ttgcctgacc ggtcaggtcg gcggaaacat ggtaatcaac gccatctttc
    47041 ttaaaggcgg agttacgcaa ataggcccac agcacggtca ccatgcccag ctcatgcgca
    47101 cgttcaaaag ccgcagaaat ttcttcaatc tggcgacgtg actcttccga gccaaaatag
    47161 atagtcgcac caaccgccac cgcgcccatg ttgaaagcct gctccacgct ggcatacagc
    47221 gtttgatcgt aggtattcgg gtaacttagc gtctcgttgt gattaagttt gacgagaaat
    47281 ggaatgcgat gcgcatagcg ccgcgatacc gacgccaaca cgccgtaagt tgataccaca
    47341 cagttacagc ccgcttcgat cgccagttca acaatgtttt tcgggtcaaa gtagagcggg
    47401 ttagcagcaa atgaagctcc ggcagagtgc tcaacgccct ggtcaaccgg cagaatagaa
    47461 agatatcctg tgccagccag acgcccggtg ttgtacaacg tctgcatatt acgtaacacc
    47521 gctggcgggc gattattgtc aatcattacg cggtctacgt agtcatgtcc ggggagataa
    47581 agctggtcag aaggaattgt catacaacgg tgctgtaaaa ggttgtcggc gtctttgcca
    47641 agcaactgcg caatatctgt cattactatg ctcccgtaaa ttccgattgg atatcggcta
    47701 tggattgtcc tggcccgcct tttgcgggca atcataatcc tggtcgttac gggcgagttt
    47761 ttccatcttt tggatgtttt ttcagcgttt tctgttggct cgattcatca gaaaaaatgt
    47821 tagcgcggtc aagttttcac cgtaaaggca tttaaaaggt attattaagt ggtattgtca
    47881 tcgcgtacct tacattacct gtcatgaagg aattaaaaga tgaaaacaac agcaaagctg
    47941 tcgttcatga tgtttgttga atggtttatc tggggcgcgt ggtttgtgcc attgtggttg
    48001 tggttaagta aaagcggttt tagtgccgga gaaattggct ggtcgtatgc ctgtaccgcc
    48061 attgcggcga tcctgtcgcc aattctggtt ggctccatca ctgaccgctt tttctcggcg
    48121 caaaaagtgc tggcggtatt gatgttcgca ggcgcgctgc tgatgtattt cgctgcgcaa
    48181 cagaccactt ttgccgggtt ctttccgtta ctgctggctt actctctaac ctatatgccg
    48241 accattgcgc tgactaacag catcgctttt gccaacgtgc cggatgtgga gcgtgatttc
    48301 ccgcgcattc gtgtgatggg cactatcggc tggattgcct ccggtctggc atgtggtttc
    48361 ttgccgcaaa tactggggta tgccgatatc tcaccgacta acatcccgct gctgattacc
    48421 gccggaagtt ctgctctgct cggtgtgttt gcgtttttcc tgcccggcac gccaccaaaa
    48481 agcaccggca aaatggatat taaagtcatg ctcggcctgg atgcgctgat cctgctgcgc
    48541 gataaaaact tcctcgtctt tttcttctgt tcattcctgt ttgcgatgcc actggcgttc
    48601 tattacatct ttgccaacgg ttatctgacc gaagtcggca tgaaaaatgc caccggctgg
    48661 atgacgctcg gccagttctc tgaaatattc tttatgctgg cattaccgtt tttcactaaa
    48721 cgctttggta tcaaaaaggt attattgctt ggtctggtca ccgctgcgat ccgctatggc
    48781 ttctttattt acggtagtgc ggatgaatat ttcacctacg cgttactgtt cctcggtatt
    48841 ttgcttcacg gcgtaagtta cgatttttac tacgttaccg cttacatcta tgtcgataaa
    48901 aaagcccccg tgcatatgcg taccgccgcg caggggctga tcacgctctg ctgccagggc
    48961 ttcggcagtt tgctcggcta tcgtcttggc ggtgtgatga tggaaaagat gttcgcttat
    49021 caggaaccgg taaacggact gactttcaac tggtccggga tgtggacttt tggcgcggtg
    49081 atgattgcca ttatcgccgt gctgttcatg atttttttct gcgaatccga caacgaaatt
    49141 acggctatca aggtcgatga tcgcgatatt gcgttgacac aaggggaagt taaatgaaaa
    49201 cagaacgtat tctcggtgct ctttatgggc aggcgttagg ggatgcgatg gggatgccct
    49261 ccgagctttg gccacgcagc cgcgttaaag cacactttgg ctggattgac cgttttctgc
    49321 ctggaccaaa ggagaataac gcggcctgtt attttaaccg cgccgaattc accgacgata
    49381 cctcgatggc gctgtgtctg gcggatgcgt tgctggaacg taaaggcaag atcgatccgg
    49441 atctgattgg gcgtaatatc ctcgactggg cgctgcgttt cgacgccttc aacaaaaacg
    49501 tgctaggtcc gacctcgaag attgcgctta acgccattcg cgacggtaaa cccgttgctg
    49561 aactggaaaa caacggcgta accaacggcg cagcgatgcg cgtctcgcca ttaggttgtt
    49621 tgcttccggc gcgcgatgtt gattccttta ttgatgatgt ggcgctggcg tcgagcccga
    49681 cccataaatc cgatctggca gttgcaggtg cggtagtcat cgcatgggcg atttctcgtg
    49741 ctattgacgg agaaagctgg tcagcgattg ttgattcact gccttcaatt acgcgacatg
    49801 cccagcaaaa acgcaccacc acgttcagcg cctcactggc ggcgcggctg gagattgcgc
    49861 tgaaaattgt gcgcaatgcc gacggcaccg aatccgccag cgaacagctt taccaggtcg
    49921 ttggcgcagg taccagcact attgagtccg ttccgtgcgc cattgcgctg gttgaactgg
    49981 cacaaaccga cccgaaccgt tgcgccgtcc tctgcgctaa ccttggcggc gatacagaca
    50041 ccatcggtgc tatggcgacg gcaatctgcg gcgcgttgca tggcattaac gctatcgatc
    50101 ctgcgttaaa ggcggagctg gatgcggtaa atcagcttga tttcaaccgc tatgccacag
    50161 cgctggcgaa atatcgtcaa caacgggagg cggtatgagc ggcgctcgat tacacacgct
    50221 gctgcctgaa ttaaccacgc gtcagtcggt gatggtcgtc ggcgcggcgg tcattgacgt
    50281 gatcgccgac gcttatgccc tcccctggcg tgggtgcgat atcgaactga aacagcagag
    50341 cgttaacgtt ggcggctgcg cactgaatat tgccgtggcg ttaaagcgcc tcggcatcga
    50401 agcgggtaat gccttgccgc tcggtcaggg ggtatgggcg gagattattc gcaaccggat
    50461 ggcgaaagag gggttaatca gcctgatcga taacgccgaa ggcgataacg gctggtgtct
    50521 ggcgctggtt gagccggatg gcgaacgtac ttttatgtca ttcagcggtg tggaaaatca
    50581 gtggaatcgc cagtggctgg cgcgattaac cgttgcgcct ggcagcctgc tctatttttc
    50641 cggttatcaa ctggcctcgc cctgcggcga attgttagtg gaatggctgg aagagctgca
    50701 agacgtgacg ccgtttatcg attttggccc acgtattggc gatatcccgg acgcattact
    50761 ggcgcggatc atggcctgtc gacctttagt gtcactcaat cgtcaagagg ctgagattgc
    50821 cgccgaacgt tttgctttat ccgcagagat aacaacactt ggcaagcaat ggcaggagaa
    50881 atttgccgcg ccgttgatcg ttcgtctcga taaagaaggc gcatggtatt tcagcaacga
    50941 cgcttctggc tgcattccgg catttccaac gcaagttgtc gacaccattg gggcgggcga
    51001 cagtcatgcc ggtggcgtac ttgccgggct ggcctctggt ctgccactgg cggatgccgt
    51061 attactgggc aatgcagtgg cgtcatgggt tgtcgggcat cggggcggtg attgtgcgcc
    51121 aacgcgcgag gaactactcc tcgcacacaa aaacgtatag atcgctgcga cagtggctaa
    51181 tgctgtactc aataggccgt tgctgttggt caagcgccac ttgcttgatc accagcaccg
    51241 gtattttgct atctaactga atatgtgact gaaactcggc atccggcatc cgggcgctaa
    51301 cgcgggaacg cgtacgttgt gggtaaatgt gctggctgcg gaaatagtca taaagtgaaa
    51361 tcccgatggc atcaacatca tgaattaaat gcgccggaac ccacgattcc tcaatcgata
    51421 ccgcttcttc atcgacatag cgaatacgct taagcaaaaa gacatcactt cctgcttcga
    51481 ccgccagctg ctgcgcgact tcttcgggac atttcacgac acgcttgtta acccatagcg
    51541 tatcgggctt tttcccgcgc aataccacct gctgagaaaa acctcgcgct tctttcaacg
    51601 agtattcgaa gatgttgttg atctgcgtgc cgtaaccgcg cgaacgcgtc accacaccct
    51661 cttcttccag cgcctgcatc gccttgcgca ccgtaatgcg cgaaacgccg gttaactgac
    51721 ttaaatcacg ctcaccgggc aaaatattgc catgctccag caccccgctg cgcacggcat
    51781 tttttaccgt ttcggcaaac ttaatataaa gcggcgtgtt atccgccgct aaaatacgct
    51841 cgttcagttg ggcaatcagc tgggtatgcg cttgttccat ttgtcttgtt cctgccgggg
    51901 agtctggtgg gagtatatca ctgcttctta tttaaggcgt ttctttaatc ccatcaacga
    51961 atgcctgcaa ctcctccacc gtgccattaa atacattaaa atccaccgga ccattgatgc
    52021 catctacctg tccacggtcg gaatgctgcc agaagcgcca ggccatgccg tcattgtccg
    52081 gacgacgttg ataatagtga gccacccacc acggatattc attgaaatag cccgccagat
    52141 tggtgtgata aaaaacggct cctgagtaaa taatcggctt ttttcccgta cttttttcga
    52201 ccatttttag ccactgactt actcgtttgc gtaattcttt tgccgataat tttccccgtt
    52261 cttctacgtc cagtaccgca gggaaatcac cttgtgagaa atccaccgtt tgcagaaata
    52321 atcgtgcctg aaccggcgct gctaccgacg gggagaaata atgatacgcc ccgcgcagca
    52381 ggccattttc gcggcttagt tgccagttac gcgaaaaata cgggtccacc agcttttcgc
    52441 cttccgtcgc cttaataaaa gcaaactgta agcggatacc gttgtcgcgc atttttgcca
    52501 cccgctgcca gtcgatccgc tcctgccagc gagaaacatc tattccgtga atggtgtaac
    52561 tggcaggaat gcgaatagcg aaagatttaa ccgggcgata accgtagaaa tggatgtagt
    52621 ctgtaatctg aactgctgtc gaatagaaaa aattcacctt ctgacgcgga taaattgcaa
    52681 cgatggaaat tagcccaaga gcgcataata gagaggtgag tttttttcga ctggtaattc
    52741 ttagctgcat tggtttcatc cctgaatgtc agtgccaaag gctgacaata accaaagcag
    52801 ctatagtacg gtgctcacca ccaggcgtgg aagtggtgaa ccggaccaat accgtgacca
    52861 acttccagcg tgtcggcctg ggctaatgct gatgaaagcc agctttttgc ctcctgtacg
    52921 gtgtcagccc agtttgtatg gcgcgggcgt agtgcagcca acgccgcaga gagcgtacaa
    52981 ccagtgccgt gggtgttttt ggtcataatg cgcggtgcgg taaaccgttg ttcaccctcg
    53041 cgggtaaaca gccagtccgg gctttgctca tcatccagat gaccaccttt cattagcact
    53101 gcgccacagc ccatcgccaa cagcgatcgc ccttgttcca gcatttcctg ttcagtgcgc
    53161 gcgtgtggcg cgtcgagcaa ggcggcagct tcgggcaagt ttggcgttat taatgaaacc
    53221 tgtggcaata atcgactgcg cagcgtagca accgccgaag gtgaaagcag cgggtcgccg
    53281 ctttttgcca gcataacggt gtcgagtacc acgtattgga tctgataacg ttgcaaccgt
    53341 tctgccaccg cttcaacaat atcggtttcc gccaacatac cgattttagt ggtgtcgatt
    53401 cgcacatcgc tgaacaccga atcgagctgg gcggcgacaa aatcagactc aatgcgatac
    53461 accgactgta cgccacgggt attttgcgcc accagtgcag taataactga gcaaccataa
    53521 gcgccaagtg ccgagaaggt tttaagatcg gcctgaatcc ccgcaccacc actcggatca
    53581 gtaccggcaa tcgtcagagc gttaattcgt ttcatgcctg cacctcctgc gtcaattgcc
    53641 agagcgcatc aaggaaatgt ggaacaaaac tgcctggccc ctcgcttctg gcgactgcgc
    53701 gttctccggc ttgtttcatc cagtgacagg cagatgcgac attttccagc gtatcgcctg
    53761 gtaacgcaca gcaggcagcg acaaccgccg ataatgcaca gccagttcct accactttgg
    53821 tcattaacgg atcgccaccg tgaataccaa tgatacgatg tccatcggta acataatcca
    53881 tctcgccagt gaccacgacg attgcgccag tttcccgtgc cagtgtttgt gcagcgggta
    53941 tcgcgttagc tgcggcgtca gtggtatcca ctccccgtcc accattagca atgccagcta
    54001 atgccatgat ttccgaagca ttaccacgta tagcggttgg cttatgaggc agaagttcca
    54061 gacaaaaacg gcggcgataa tcgagtgcac caaccgctac tggatcaagc gtccagggtg
    54121 tttgagagct ttttgcttgc tcaacggcgg cacacatcga ctgtgcgcgt agctgcgtca
    54181 gcgtgccaac gttaatcagc aacgcactag caatagccgc aaactgactg gcctcttcgg
    54241 tttcgataac catcgctggc gatgcaccga gcgccagcaa ggtattggca gtaaaggttt
    54301 gcaccacatc gttggtcatg cagtgcacaa gaggggaatg ttggtgaaaa aggtgtaacg
    54361 cgtgcgcaga ttgcgctgaa ctctgcaggt cgacttgcat agtttgctcc tgccataacg
    54421 tgaagaagca atgacctggt ggtccgtgac ttccctacgc tggcattatc cagatcaggt
    54481 aatacgggta tttctcagcc ttcacaaaga agggcacccc gagtcattta aaacaaaatc
    54541 aaaagattgc gattaacgtc ccgttaatcc ctgttctgga tcatgccagc ggaaagccaa
    54601 agactcaacc ctaaaaaatc ctctgtgtcc cagtttgtgt ctcacgttgt ggcccacaga
    54661 taaatggcag gcacaaaaaa accgcccata aggcggctta agtaaattat tcagtcgtga
    54721 agatttaaat gaaatctatt ttctgcatac gctttcttca tgcagtcgaa gtgcttttgc
    54781 caattccaat tggaatgcaa aggaaagacg ggaacggctg atcttgatac cgtcaataat
    54841 gatgtatgta gggtaaacag tgaccatgcg gcccaagtat tggaagtgtt tagggtggtt
    54901 tactttatcg ttattcattg tgtgccatcc gtctgggtgg gggtaatccc ggcaacggat
    54961 gattgatcta aaatcgatca aaatcaataa cttaacagat caccaaatcc aggggggtgt
    55021 acattggcga gcctccctca gcctaaccta tacacgacca taaaataggg gcggattcct
    55081 tccagttggg tgggaaaata tctgggagtt tggatacagt agccaggcag ggtaaccaga
    55141 cccatagatg agaatgttta ttattcccaa atatccaggc gaggggcctg ctgtggctct
    55201 ctttacgcgc cgctgtggcg tcttctctcc tctttctata caatcccata gctaacccat
    55261 tgcgaggctt acagagcgtt acagagcgtc cgtgtgaata ttgcataaat gaaagtggtg
    55321 aaaggtccga tttggtcaac ttttagacaa ctatttaaca tatgcgcaac aggttagacc
    55381 tgtacccttt caataggtcc gcctcctggg cgctgtgtac gccccataac tgtggctctt
    55441 ctgtacccat ccgggagcca ttccacagag taaactgtaa aactgatctg cctgtgagta
    55501 acgccctttt cctgtggata acttccacgc actaacccca taaactcccc ttttgaggcg
    55561 tccgcctctt caggcccttt cttgtggcaa aaacacaaaa agggtttagg gcggtggcta
    55621 ccgcccctgt agatgggaat gagtcgcact cgaaagaggg attgagaacc aattctcaag
    55681 tgataatcga tctcatttgt gttcgaagtt ttccccagaa aaataatttt ggggttaagc
    55741 atgtaaaatg ctacacactt gcactttgta atgataatta attgaccata aaaacaaata
    55801 gttagaagcg ctgggggagt cccactagtt acacaattga ttgctttttg agctaaaact
    55861 gattctttta ccgggtatac aatccatttg atcgcccttt accacatatt taaacggatt
    55921 taaagccatt tatttagggg gttagcaaag tgttgattcc atggttacag ataacaaaaa
    55981 agcccgccgg gggttagccg ggggcctgtg gttgggggtg tcaaacgtgg ttagttcggc
    56041 ccgccctgca ttagcatgtt gaaagcctgc tgattattgc tctcaacttc agagcgtacc
    56101 agatccttaa cctatccatc ctgcactttc acattaacgt tcacgtttag cggctggttt
    56161 agccacgctg gcggcgtcat cagtggatta cctgccatat caactttaag ctgtggcgct
    56221 gtaatcgtcg gcgtaggagg tacataagtt ggattggagt aagagcttac ccaccctgtt
    56281 ttatctgctg gtttggcaaa gtctggatta gtcggaaggt ctggactatg gaggaaatcc
    56341 cacagtttac ccagcgggct atcttttttc agattgcccc cggcggtggt gtcctgtcca
    56401 tacatggcgt cgttagcgtc atgaccttat cccaggcata atccccacct accgaaccga
    56461 ccgcaatgct ccagccaaca ggaccgccag agagagccgc cgcgccgcct accttgccaa
    56521 ctttcggacc ccgacccggt ttgtttggct tgtctttacc ttccccacca gatccgccag
    56581 tagtagcggc ttcaatgcca ccaatagcgg cgatcccttt catgaccccc agtaatttgg
    56641 ttagtgggtt aagcatggtc aacaaccatt taaaggctac gcccaacttc cagatagacc
    56701 cggcgaacat agccaccccg gcggcgtatg ctgccatttc gccccaggct ttaagctgct
    56761 caccagtgat ccccatcttg ctggcgtaat actcaataat gcggaaggtc aggatcacag
    56821 tgtcatgcaa ctctgtaaac gcatctgtgg caccctcaac gattttcccg gcaatatgcc
    56881 cgaacatctc aaaggcccca ccagagccgt taacagcggc gctgatagcg tcgaaagcgc
    56941 tggttaattc gttgccgaag ccagaagcaa agaagatgtt catcgcgttc tgcatactgg
    57001 tttgcaggcg ctgccagctt gcccggttgg acttcatagc cttatccaga gcgccgccgt
    57061 tacgagctgc ggctttcatc tgtttagcca cttccgggag gatgtcctta gagaacagct
    57121 tcccttgttg catcaggtca aacagatcct tttctgtaag gttggttgtc cctttcatct
    57181 ggttgagagc cttaacgaac agacccacag cccccgggag agcttcggac aactggcctt
    57241 tgagttcttc actcattacc gttcctttag acatcatctg attcaaactt ttcaaagcgc
    57301 ggctggcttc atcggctgaa gcacctgtaa caaggcccca ttcactggca ccctcaaaga
    57361 tggatcgcat ctggtcttta gggagcttgt caccaacagc ggcggcaaac tgagtgtaat
    57421 cacgggaagt cttgaggaga tccagcccca aacggttgga ttgatcacgg agataatcaa
    57481 actctttagc ggccttatct gtggaaccgg tgatcgctgt cagaccagaa agcgcggatt
    57541 caaaatcctg tccggtggtc atgatcttgc cgctcagcgc cacagttgcg gcaatggtga
    57601 tcgccccgcc tgcaccctcg atcatgg
//
LOCUS       DADMIB010000008        54608 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.008, whole genome shotgun sequence.
ACCESSION   DADMIB010000008 DADMIB010000000
VERSION     DADMIB010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 54608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 54608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..54608
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.008"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            19..909
                     /gene="cyoE"
                     /locus_tag="JNZ89_000511"
     CDS             19..909
                     /gene="cyoE"
                     /locus_tag="JNZ89_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HAY8934479.1"
                     /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
                     GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLW
                     FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS
                     GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV
                     ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS
                     VMMSVDFMVPDSHTLLAAVW"
     gene            1058..2422
                     /locus_tag="JNZ89_000512"
     CDS             1058..2422
                     /locus_tag="JNZ89_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308508.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8934480.1"
                     /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
                     ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW
                     GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH
                     KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN
                     FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK
                     MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG
                     YKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPA
                     YVSSLRIEIPANIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFDVEQA
                     IRQA"
     gene            complement(2550..3041)
                     /gene="yajQ"
                     /locus_tag="JNZ89_000513"
     CDS             complement(2550..3041)
                     /gene="yajQ"
                     /locus_tag="JNZ89_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414960.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide binding protein YajQ"
                     /protein_id="HAY8934481.1"
                     /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA
                     SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI
                     ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN
                     FRD"
     gene            3209..4120
                     /gene="panE"
                     /locus_tag="JNZ89_000514"
     CDS             3209..4120
                     /gene="panE"
                     /locus_tag="JNZ89_000514"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HAY8934482.1"
                     /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSANLVET
                     DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT
                     IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
                     PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE
                     GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP
                     ENTRLFEMVKRKESEYERIGTGLPRPW"
     gene            4083..4673
                     /gene="yajL"
                     /locus_tag="JNZ89_000515"
     CDS             4083..4673
                     /gene="yajL"
                     /locus_tag="JNZ89_000515"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase YajL"
                     /protein_id="HAY8934483.1"
                     /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA
                     ITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV
                     AAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGT
                     AIDFGLKIIDLQVGREKAHEVASQLVMAAGIYNYYE"
     gene            complement(4727..6175)
                     /gene="thiI"
                     /locus_tag="JNZ89_000516"
     CDS             complement(4727..6175)
                     /gene="thiI"
                     /locus_tag="JNZ89_000516"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HAY8934484.1"
                     /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV
                     RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL
                     EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLL
                     LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI
                     GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA
                     ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
                     DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIALQTE
                     QEVVEVETVNGFGPNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNR
                     TWLLWCERGVMSRLQALYLREQGFNNVKVYRP"
     gene            6381..6623
                     /gene="xseB"
                     /locus_tag="JNZ89_000517"
     CDS             6381..6623
                     /gene="xseB"
                     /locus_tag="JNZ89_000517"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015571292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HAY8934485.1"
                     /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ
                     LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE"
     gene            6623..7522
                     /gene="ispA"
                     /locus_tag="JNZ89_000518"
     CDS             6623..7522
                     /gene="ispA"
                     /locus_tag="JNZ89_000518"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HAY8934486.1"
                     /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG
                     KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
                     VKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQAL
                     DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA
                     FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ
                     LAEQSPDTSALEALADYIIQRNK"
     gene            7547..9409
                     /gene="dxs"
                     /locus_tag="JNZ89_000519"
     CDS             7547..9409
                     /gene="dxs"
                     /locus_tag="JNZ89_000519"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HAY8934487.1"
                     /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
                     RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
                     GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA
                     FEAMNHAGDIRPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
                     VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ
                     FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA
                     KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY
                     STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT
                     PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI
                     LNFGTLMPEAAKVAESLNATLVDMRFVKPLDETLILEMAASHEALVTVEENAIMGGAG
                     SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA"
     gene            9464..10438
                     /gene="yajO"
                     /locus_tag="JNZ89_000520"
     CDS             9464..10438
                     /gene="yajO"
                     /locus_tag="JNZ89_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414953.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxyxylulose-5-phosphate synthase YajO"
                     /protein_id="HAY8934488.1"
                     /translation="MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPII
                     KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR
                     AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH
                     ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGR
                     LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK
                     PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK"
     gene            complement(10492..11010)
                     /gene="pgpA"
                     /locus_tag="JNZ89_000521"
     CDS             complement(10492..11010)
                     /gene="pgpA"
                     /locus_tag="JNZ89_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HAY8934489.1"
                     /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA
                     AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
                     MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
                     FIGHHWPLGILS"
     gene            complement(10988..11965)
                     /gene="thiL"
                     /locus_tag="JNZ89_000522"
     CDS             complement(10988..11965)
                     /gene="thiL"
                     /locus_tag="JNZ89_000522"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HAY8934490.1"
                     /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI
                     STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES
                     FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT
                     PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI
                     SDLGHIVKASDCGVRIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR
                     GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP"
     gene            complement(12043..12462)
                     /gene="nusB"
                     /locus_tag="JNZ89_000523"
     CDS             complement(12043..12462)
                     /gene="nusB"
                     /locus_tag="JNZ89_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HAY8934491.1"
                     /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
                     VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV
                     AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK"
     gene            complement(12482..12952)
                     /gene="ribE"
                     /locus_tag="JNZ89_000524"
     CDS             complement(12482..12952)
                     /gene="ribE"
                     /locus_tag="JNZ89_000524"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HAY8934492.1"
                     /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV
                     KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA
                     HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
     gene            complement(13041..14144)
                     /gene="ribD"
                     /locus_tag="JNZ89_000525"
     CDS             complement(13041..14144)
                     /gene="ribD"
                     /locus_tag="JNZ89_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HAY8934493.1"
                     /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ
                     RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD
                     PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
                     TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL
                     YPQQNLRQPVRIVIDSQNRVTPEHHIVQQPGETWFARTQEDSREWPETVRTLLIPEHK
                     GHLDLVVLMMQLGKQQINSIWGEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC
                     TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA"
     gene            complement(14148..14597)
                     /gene="nrdR"
                     /locus_tag="JNZ89_000526"
     CDS             complement(14148..14597)
                     /gene="nrdR"
                     /locus_tag="JNZ89_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HAY8934494.1"
                     /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
                     ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE
                     VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED"
     gene            14748..15287
                     /locus_tag="JNZ89_000527"
     CDS             14748..15287
                     /locus_tag="JNZ89_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HAY8934495.1"
                     /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN
                     QETVKITQQNRLNAKSSSGGYLLPGAKTPARLESQIGTLRMSLVNITPDTDGTTLTLR
                     IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG
                     ISVDQLGFVRIHDIQPVMQ"
     gene            15586..16470
                     /locus_tag="JNZ89_000528"
     CDS             15586..16470
                     /locus_tag="JNZ89_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-specific channel-forming protein Tsx"
                     /protein_id="HAY8934496.1"
                     /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS
                     YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI
                     EPRFSIDKLTNTDLNFGPFKEWYFANNYIYDMGRNKNGRQSTWYMGLGTDIDTDLPMS
                     LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG
                     DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN
                     FNVRSTGWGGYLVVGYNF"
     gene            complement(16647..16994)
                     /locus_tag="JNZ89_000529"
     CDS             complement(16647..16994)
                     /locus_tag="JNZ89_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH nuclease family protein"
                     /protein_id="HAY8934497.1"
                     /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV
                     HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN
                     PFADLKAMMNKKK"
     gene            complement(17123..18094)
                     /gene="secF"
                     /locus_tag="JNZ89_000530"
     CDS             complement(17123..18094)
                     /gene="secF"
                     /locus_tag="JNZ89_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HAY8934498.1"
                     /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR
                     GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE
                     GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGEDLTQTGAMALMAALLSILVY
                     VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
                     DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT
                     MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
     gene            complement(18105..19952)
                     /gene="secD"
                     /locus_tag="JNZ89_000531"
     CDS             complement(18105..19952)
                     /gene="secD"
                     /locus_tag="JNZ89_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HAY8934499.1"
                     /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA
                     ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA
                     LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
                     KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR
                     LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
                     ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
                     EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
                     INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
                     EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA
                     GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII
                     LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI"
     gene            complement(19980..20312)
                     /gene="yajC"
                     /locus_tag="JNZ89_000532"
     CDS             complement(19980..20312)
                     /gene="yajC"
                     /locus_tag="JNZ89_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HAY8934500.1"
                     /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
                     RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL
                     PKGTMKAL"
     gene            complement(20335..21462)
                     /gene="tgt"
                     /locus_tag="JNZ89_000533"
     CDS             complement(20335..21462)
                     /gene="tgt"
                     /locus_tag="JNZ89_000533"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HAY8934501.1"
                     /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE
                     EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
                     KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
                     MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG
                     EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
                     LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
                     LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD"
     gene            complement(21518..22588)
                     /gene="queA"
                     /locus_tag="JNZ89_000534"
     CDS             complement(21518..22588)
                     /gene="queA"
                     /locus_tag="JNZ89_000534"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HAY8934502.1"
                     /translation="MRVTDFFFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT
                     DLLDKLNPGDLLVFNNTSVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
                     PGAELLLGDDESINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYIDRPDEDA
                     DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD
                     TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF
                     FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF
                     FSYGDAMFITYNPQAINERVGE"
     gene            22681..23262
                     /gene="acpH"
                     /locus_tag="JNZ89_000535"
     CDS             22681..23262
                     /gene="acpH"
                     /locus_tag="JNZ89_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HAY8934503.1"
                     /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM
                     HRRIDVLTDNLPEVREAREWFRRETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFI
                     CYARKQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR
                     DSWYDLNAHYTALGTRFWQFYPRMMAQASHKAL"
     gene            complement(23267..24989)
                     /gene="malZ"
                     /locus_tag="JNZ89_000536"
                     /pseudo
     CDS             complement(23267..24989)
                     /gene="malZ"
                     /locus_tag="JNZ89_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706291.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin glucosidase"
     gene            complement(25145..26518)
                     /gene="proY"
                     /locus_tag="JNZ89_000537"
     CDS             complement(25145..26518)
                     /gene="proY"
                     /locus_tag="JNZ89_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline-specific permease ProY"
                     /protein_id="HAY8934504.1"
                     /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
                     LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
                     AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI
                     IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII
                     GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH
                     MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT
                     VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK
                     ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD
                     RQLAENQ"
     gene            complement(26594..27913)
                     /gene="brnQ"
                     /locus_tag="JNZ89_000538"
     CDS             complement(26594..27913)
                     /gene="brnQ"
                     /locus_tag="JNZ89_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transporter carrier
                     protein BrnQ"
                     /protein_id="HAY8934505.1"
                     /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
                     AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT
                     ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
                     ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
                     TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG
                     GGGSFLLAALIFIACLVTAVGLTCACAEFFAQNVPLSYRTLVFILGGFSMVVSNLGLS
                     QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF
                     SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH"
     gene            complement(28320..29615)
                     /gene="phoR"
                     /locus_tag="JNZ89_000539"
     CDS             complement(28320..29615)
                     /gene="phoR"
                     /locus_tag="JNZ89_000539"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HAY8934506.1"
                     /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI
                     WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
                     GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD
                     FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
                     LTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTQLLNE
                     KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP
                     EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA
                     IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD"
     gene            complement(29673..30362)
                     /gene="phoB"
                     /locus_tag="JNZ89_000540"
     CDS             complement(29673..30362)
                     /gene="phoB"
                     /locus_tag="JNZ89_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate response regulator transcription
                     factor PhoB"
                     /protein_id="HAY8934507.1"
                     /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE
                     PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
                     ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEF
                     KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV
                     RGTGYRFSTRF"
     gene            30552..31754
                     /gene="sbcD"
                     /locus_tag="JNZ89_000541"
     CDS             30552..31754
                     /gene="sbcD"
                     /locus_tag="JNZ89_000541"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HAY8934508.1"
                     /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII
                     VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT
                     TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIISSQAGLNGIEKQQHLLAAITDY
                     YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI
                     ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT
                     QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALAESLPVE
                     VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH
                     TLAGEHEA"
     gene            31751..34894
                     /gene="sbcC"
                     /locus_tag="JNZ89_000542"
     CDS             31751..34894
                     /gene="sbcC"
                     /locus_tag="JNZ89_000542"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
                     /protein_id="HAY8934509.1"
                     /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT
                     TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR
                     NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
                     FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQV
                     QSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKA
                     QPQLAALSLAQPARNLRPHWERIAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHA
                     AKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHA
                     EQKLNALAAITLTLTADEVATALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ
                     NGSLEQTQRNVALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL
                     CGSTSHPAVKAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENE
                     AQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHKRQLRLLSQRHELQGQ
                     IAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQN
                     ELTTLQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQD
                     VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT
                     LVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA
                     DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL
                     TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSH
                     KTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVK
                     KINGLGYSKLESTFAVK"
     gene            35020..36252
                     /gene="araJ"
                     /locus_tag="JNZ89_000543"
     CDS             35020..36252
                     /gene="araJ"
                     /locus_tag="JNZ89_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter AraJ"
                     /protein_id="HAY8934510.1"
                     /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI
                     SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG
                     FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF
                     LLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGNAGVFAW
                     FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV
                     LALLMFFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN
                     LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAGE
                     TTGVGYSLGVHYLLPDAA"
     gene            complement(36351..37259)
                     /gene="mak"
                     /locus_tag="JNZ89_000544"
     CDS             complement(36351..37259)
                     /gene="mak"
                     /locus_tag="JNZ89_000544"
                     /EC_number="2.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414928.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase"
                     /protein_id="HAY8934511.1"
                     /translation="MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIA
                     TLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRL
                     ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHISGNGTAGEWGHNPL
                     PWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESD
                     PVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVPQLIKQFVFGGE
                     CETPVRKAKHGDSSGVRGAAWLWPQE"
     gene            37384..38295
                     /gene="rdgC"
                     /locus_tag="JNZ89_000545"
     CDS             37384..38295
                     /gene="rdgC"
                     /locus_tag="JNZ89_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HAY8934512.1"
                     /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG
                     WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT
                     EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
                     LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
                     ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD
                     ADFILMTGELAALIQNLIEGLGGEAQR"
     gene            complement(38373..38456)
                     /locus_tag="JNZ89_000546"
     CDS             complement(38373..38456)
                     /locus_tag="JNZ89_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934513.1"
                     /translation="MTQRPWSKLQHKTHNIAALKIIVRRSE"
     gene            complement(38453..38794)
                     /locus_tag="JNZ89_000547"
                     /pseudo
     CDS             complement(38453..38794)
                     /locus_tag="JNZ89_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308469.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing protein"
     gene            complement(38942..39226)
                     /gene="ppnP"
                     /locus_tag="JNZ89_000548"
     CDS             complement(38942..39226)
                     /gene="ppnP"
                     /locus_tag="JNZ89_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HAY8934514.1"
                     /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE
                     MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL"
     gene            complement(39298..39975)
                     /locus_tag="JNZ89_000549"
     CDS             complement(39298..39975)
                     /locus_tag="JNZ89_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AroM family protein"
                     /protein_id="HAY8934515.1"
                     /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE
                     VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI
                     SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL
                     GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR
                     LAAELLV"
     gene            complement(40233..40424)
                     /gene="yaiA"
                     /locus_tag="JNZ89_000550"
     CDS             complement(40233..40424)
                     /gene="yaiA"
                     /locus_tag="JNZ89_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YaiA"
                     /protein_id="HAY8934516.1"
                     /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH
                     PTAQEAMDAKKRYEDPDKE"
     gene            complement(40474..40998)
                     /gene="aroL"
                     /locus_tag="JNZ89_000551"
     CDS             complement(40474..40998)
                     /gene="aroL"
                     /locus_tag="JNZ89_000551"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroL"
                     /protein_id="HAY8934517.1"
                     /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT
                     VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA
                     PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV
                     ISEIRSALAQTINC"
     gene            complement(41181..41639)
                     /locus_tag="JNZ89_000552"
     CDS             complement(41181..41639)
                     /locus_tag="JNZ89_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414921.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HAY8934518.1"
                     /translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF
                     IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATI
                     RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG"
     gene            41759..42568
                     /gene="proC"
                     /locus_tag="JNZ89_000553"
     CDS             41759..42568
                     /gene="proC"
                     /locus_tag="JNZ89_000553"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HAY8934519.1"
                     /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPNKVAA
                     LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL
                     DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
                     AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET
                     GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS"
     gene            complement(42585..43700)
                     /gene="adrA"
                     /locus_tag="JNZ89_000554"
                     /gene_synonym="dgcC"
     CDS             complement(42585..43700)
                     /gene="adrA"
                     /locus_tag="JNZ89_000554"
                     /gene_synonym="dgcC"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase AdrA"
                     /protein_id="HAY8934520.1"
                     /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP
                     RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL
                     KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL
                     TGITVSFNSAPLEWWLSLPIIVVYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV
                     YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ
                     ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVREGLNTLRLPNTPQVTLRISVG
                     VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA"
     gene            complement(43802..44122)
                     /gene="psiF"
                     /locus_tag="JNZ89_000555"
     CDS             complement(43802..44122)
                     /gene="psiF"
                     /locus_tag="JNZ89_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiF"
                     /protein_id="HAY8934521.1"
                     /translation="MKITLLVTLLFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQA
                     LKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACL
                     KKAA"
     gene            complement(44241..45656)
                     /gene="phoA"
                     /locus_tag="JNZ89_000556"
     CDS             complement(44241..45656)
                     /gene="phoA"
                     /locus_tag="JNZ89_000556"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HAY8934522.1"
                     /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA
                     RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL
                     TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA
                     AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL
                     NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNAVTEANQQKP
                     LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK
                     NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKDGNTLVIVTADH
                     AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN
                     VVGLTDQTDLFYTMKAALGLK"
     gene            complement(45757..46017)
                     /gene="iraP"
                     /locus_tag="JNZ89_000557"
     CDS             complement(45757..46017)
                     /gene="iraP"
                     /locus_tag="JNZ89_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraP"
                     /protein_id="HAY8934523.1"
                     /translation="MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND
                     QQRLIEQVEGALYEVKPDASIPDDDTELLRNYVKKLLKHPRQ"
     gene            complement(46244..46401)
                     /locus_tag="JNZ89_000558"
                     /pseudo
     CDS             complement(46244..46401)
                     /locus_tag="JNZ89_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            46479..47573
                     /gene="ddlA"
                     /locus_tag="JNZ89_000559"
     CDS             46479..47573
                     /gene="ddlA"
                     /locus_tag="JNZ89_000559"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HAY8934524.1"
                     /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID
                     KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPSKHEHQLIDAQNGQPLPTVDVI
                     FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT
                     LTRANRHNISFAEVESKLRLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV
                     IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP
                     EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA
                     SGLGYTDLITRLIELALERHAADNALKTTM"
     gene            complement(47597..47809)
                     /locus_tag="JNZ89_000560"
     CDS             complement(47597..47809)
                     /locus_tag="JNZ89_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414914.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2754 family protein"
                     /protein_id="HAY8934525.1"
                     /translation="MNLPVKIRRDWHYYAFAIGLIFILNGAVGLLGFEAKGWQTYAVG
                     LVTWVISFWLAGLIIRRRDEETENAQ"
     gene            48069..48377
                     /locus_tag="JNZ89_000561"
     CDS             48069..48377
                     /locus_tag="JNZ89_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2755 family protein"
                     /protein_id="HAY8934526.1"
                     /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL
                     LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ
                     "
     gene            complement(48436..49530)
                     /gene="yaiW"
                     /locus_tag="JNZ89_000562"
     CDS             complement(48436..49530)
                     /gene="yaiW"
                     /locus_tag="JNZ89_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-exposed outer membrane lipoprotein YaiW"
                     /protein_id="HAY8934527.1"
                     /translation="MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ
                     KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA
                     WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
                     GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL
                     NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE
                     LATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGI
                     QLESPKITRNLTTAWFAKRVDERRARCMKQ"
     gene            complement(49543..50763)
                     /gene="sbmA"
                     /locus_tag="JNZ89_000563"
     CDS             complement(49543..50763)
                     /gene="sbmA"
                     /locus_tag="JNZ89_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706191.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HAY8934528.1"
                     /translation="MFKSFFPKPGAFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ
                     IPISAARFWSLDFLIFYAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLV
                     EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS
                     HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLVA
                     FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE
                     AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG
                     LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE
                     LDGDKIQEVTHTLS"
     gene            51115..52272
                     /locus_tag="JNZ89_000564"
     CDS             51115..52272
                     /locus_tag="JNZ89_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-12 family class D beta-lactamase AmpH"
                     /protein_id="HAY8934529.1"
                     /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY
                     GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD
                     QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
                     REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK
                     DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR
                     SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF
                     ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS"
     gene            complement(52273..52896)
                     /gene="iprA"
                     /locus_tag="JNZ89_000565"
     CDS             complement(52273..52896)
                     /gene="iprA"
                     /locus_tag="JNZ89_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide resistance inhibitor IprA"
                     /protein_id="HAY8934530.1"
                     /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDT
                     FFILEGVISLRREENVLIGITQASYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQT
                     ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI
                     GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY"
     gene            complement(52984..>54608)
                     /locus_tag="JNZ89_000566"
     CDS             complement(52984..>54608)
                     /locus_tag="JNZ89_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000556401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY8934531.1"
                     /translation="NNGSQVNVTDSSLVSDTIGLTNGSSLNIGANGVVATDHLTVDSY
                     STVNLTESTGWNNYSNLYTNTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADHN
                     GNVISGVFDINSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNG
                     TELDNSSVDNVVAATGNYKVRIDNATGAGTIADYKDKELIRVNDANTNATFSAANKAD
                     LGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGL
                     ADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGD
                     MNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNS
                     DAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELG
                     VDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSF
                     TKNFSAYTDANYLGGGDVDQDWSANVGVKYTW"
BASE COUNT        13508 a        14480 c        13645 g        12975 t
ORIGIN      
        1 gcactaagag cggcggttat gatgtttaag caatacctgc aagtaacgaa accaggcatc
       61 atctttggca acctgatctc ggtgattggg ggattcctgc tggcctcaaa gggcagcatt
      121 gattatcccc tgtttatcta cacgctggtt ggggtgtcac tggttgtggc gtcgggttgt
      181 gtgtttaaca actacatcga cagggatatc gacagaaaga tggaaaggac gaagaatcgg
      241 gtgctggtta aaggcctgat ctctcctgct gtctcgctgg tgtacgccac cttgctgggt
      301 attgctggct ttatgctgct gtggtttggc gcgaatccgc tggcctgctg gctgggggtg
      361 atgggctttg tggtttatgt cggcgtctat agcctgtaca tgaaacgcca ctcagtctac
      421 ggcacattga ttggttcgct ctccggcgct gcgccgccgg tgattggcta ctgtgcagta
      481 accggcgagt tcgatagcgg cgcagcgatc ctgctggcta tcttcagcct gtggcagatg
      541 cctcactcct atgccatcgc cattttccgc tttaaggatt accaggcggc aaacattccg
      601 gtattgccag tggtaaaagg catttcggtg gcgaagaatc acatcacgct gtatatcatc
      661 gcctttgccg ttgccacgct gatgctctct cttggcggtt acgctggata taaatatctg
      721 gtggtcgccg cggcggttag cgtctggtgg ttaggtatgg ctctgcgcgg ttataaagtt
      781 gctgatgaca gaatctgggc gcgcaagctg ttcggcttct ctatcatcgc catcactgcc
      841 ctctcggtga tgatgtccgt tgattttatg gtaccggact cgcatacgct gctggctgct
      901 gtgtggtaac aaaacctctc tattaaaaag gtgctacggc accttttttc ttagcattag
      961 aaacatatcc ctctcgaaat atttactaaa aaatccgcat gtttatccca ttcgtttgcc
     1021 gctttacact agtcgcgaat ttaaaacaga ggtggtaatg aacgattata aaatgacgcc
     1081 aggtgagagg cgcgcgacct ggggtttagg gaccgtattc tcgttgcgca tgctgggcat
     1141 gtttatggtt ctgccggttc tgaccacgta tggcatggct ctgcaaggtg ccagcgaagc
     1201 attaatcggt attgccattg gtatttatgg tctgactcag gccgtttttc agattccgtt
     1261 tggcctgctt tccgaccgta ttggtcgcaa accattaatt gtcggtgggc tggcggtgtt
     1321 tgccgccggt agcgttatcg ctgcgctctc tgactccatc tggggaatta ttctaggccg
     1381 ggcgctacaa ggctccggtg cgattgccgc tgccgttatg gcgctgcttt ccgatctcac
     1441 gcgcgaacaa aaccgcacca aagcaatggc gtttatcggc gtgagctttg gcattacctt
     1501 tgccattgcg atggtgcttg gcccgatcat cactcacaaa cttgggctgc acgcgctgtt
     1561 ctggatgatc gctattctgg caacgaccgg cattgcgttg accatttggg ttgtgcccaa
     1621 cagtagcact cacgtactta atcgtgagtc cggaatggtg aaaggcagtt tcagtaaagt
     1681 gctggcggaa ccgcggctgc tgaaactcaa ctttggcatt atgtgtctgc atattttgct
     1741 gatgtcgacg tttgttgccc tgcccggaca actggctgat gcagggttcc cggcggctga
     1801 acactggaag gtctatctgg cgacaatgct aatcgccttt ggctcggtcg tgcctttcat
     1861 tatctacgct gaagttaagc gcaaaatgaa gcaagtcttt gtcttctgcg tcggattgat
     1921 cgtggttgcg gaaattgtgt tgtggaacgc gcaaacgcag ttctggcaac tggtggtcgg
     1981 cgtgcagctt ttctttgtag cgtttaattt gatggaagcc cttctgcctt cacttatcag
     2041 taaagagtcg ccagcaggtt acaaaggtac agcgatgggt gtttactcca ccagccagtt
     2101 tcttggcgtg gcgattggcg gttcactggg cggctggatt gacggcatgt ttgacggtca
     2161 gggcgtattt ctcgctggcg caatgctggc cgcagtgtgg ctggcagtcg ccagtaccat
     2221 gaaagaaccg gcgtatgtca gcagtttgcg cattgaaatc ccggcgaaca ttgccgcaaa
     2281 cgaggcgtta aaagtgcgtt tgctagaaac tgaaggcatc aaagaagtgt tgattgcaga
     2341 agaagaacat tcagcttatg tgaaaatcga cagcaaagtg acgaatcgct ttgatgttga
     2401 acaggcaatt cgccaggcat aaaagcgagg cgaaattgcc tgctgcgcta cgctcatcag
     2461 gcctactaag ctcctgattt acaagccttt gtaggccgaa ccaggcgttc atgccgcatc
     2521 tgacatgaac aaagcgcagg ttgtcgcgat taatcgcgga agtttttgaa ctggaacggc
     2581 tgacccagat cgccaccgcg caccatcgcc atgacagcct gcaaatcatc acgagatttg
     2641 ccagtcacgc ggatctcatc gccctgaatt tgcgcctgca ctttcagttt gctgtctttg
     2701 atcatcttga cgattttttt ctgggtcgcg ctctcaatgc cctgcttcag tttcgcttcc
     2761 acaaaccagg ttttaccgct atgaacgata ttttccggta catccagtga actgccttca
     2821 atgccgcgct tcagcagctt ggcacgcaga atatccagca actgattgac ctggaaatcg
     2881 gactcgctca acactttgat ggttttgctg gcgtcgttca gctcaaatga ggcttcaacg
     2941 ttacggaagt caaaacggga ctccacttcg cggctcgcgt tatcgaccgc gttacgtgct
     3001 tcctgaagat caacttcaga gacaatatcg aaagatggca tcttttcctc tcccttcatt
     3061 tttgatgcga agcataatac ccgcaaagtt aaataaccga cagtcctgca ccaggacgta
     3121 tcccttaatt gtgcatagtc acaacagcat gcacaattaa gggatagcct tattgaacac
     3181 ccggagtggt tgcgggtgag gaggaacaat gaaaattacc gtattgggat gcggtgcctt
     3241 agggcaatta tggcttacag cactttgcaa acagggtcat gaagttcagg gctggctgcg
     3301 cgtaccgcaa ccttattgta gtgcgaatct ggttgagaca gatggttcga tatttaacga
     3361 atcgctgacc gccaacgatc ccgattttct cgccaccagc gatctgctcc tggtgacgct
     3421 gaaagcatgg caggtttccg atgccgtcaa aagcctcgcg tccacactgc ctgtaaccac
     3481 gccaatactg ttaattcaca acggcatggg caccatcgaa gagttgcaaa atattcagca
     3541 gccattactg atgggcacca ccacccatgc cgcccgccgc gacggcaatg tcattattca
     3601 tgtggcaaac ggtatcacgc atattggtcc ggcacggcaa caggatggcg attacagtta
     3661 tctggcggat attttacaaa ccgtgttgcc tgacgttgcc tggcataaca atattcgcgc
     3721 cgagctgtgg cgcaagctgg cagtcaactg cgtgattaat ccactgaccg ccatctggaa
     3781 ttgcccgaac ggtgaattac gtcatcatcc gcaagaaatt atgcaaatat gcgaagaagt
     3841 cgcggcagtg atcgaacgcg aagggcatca tacttcagcg gaagatttgc gtgattacgt
     3901 gatgcaggtg attgatgcca cagcggaaaa tatctcgtcg atgttgcagg atatccgcgc
     3961 gctgcgccac accgaaatcg actatatcaa tggttttctc ttacgccgcg cccgcgcgca
     4021 tgggattgcc gtaccggaaa acacccgcct gtttgaaatg gtaaaaagaa aggagagtga
     4081 atatgagcgc atcggcactg gtttgcctcg cccctggtag tgaagagact gaagccgtca
     4141 ccacgatcga cctcttggtt cgcggcggta tcaaagtcac cactgccagc gtagccagcg
     4201 atggcaacct ggcaattacc tgctcgcgcg gcgtgaagct gctggcggat gcgccgctgg
     4261 tcgaggtggc tgatggcgaa tatgacgtga tcgtactgcc tggtggcatt aaaggcgcag
     4321 agtgttttcg cgatagcact ctgctggttg aaaccgttaa acagttccac cgttccgggc
     4381 gtatcgtcgc ggctatttgc gccgcgccag ccaccgtgct ggtgccgcac gatatcttcc
     4441 cgattggtaa tatgaccggc ttcccgacgc tgaaagacaa aattcccgct gaacaatggc
     4501 aggacaagcg cgtcgtctgg gatgcacggg taaaattgct gaccagccag gggccgggga
     4561 cagctatcga ctttggtctg aaaattatcg acctgcaggt tgggcgcgag aaagcccatg
     4621 aagtggcatc acaactggtg atggcggcag ggatttataa ttattacgag tagtgtcgga
     4681 tgcggtaagc gtcgcatctg accagatgcg acgttacaac cacaaattac gggcgatata
     4741 ccttcacatt gttaaagccc tgctcgcgca gatagagcgc ctgcagacgg ctcatcaccc
     4801 cgcgctcaca ccacagtagc caggttctgt tctggtcgag atcgccaaac ttggtgctca
     4861 gtttatagaa cggcagagaa actacatcaa tcccttcgac tttcagtggc ttatcttcct
     4921 gttcatcgat agaacggata tcgaggatca cgtcgttcgg gccgaagcca ttgacggttt
     4981 ccacttccac cacttcctgc tcggtctgca gggcgatttc gcggatatca acgttattcg
     5041 cttcttcaac cactttatcg agaatgctga agtcgaattt ctcttcttcc gcttcaatct
     5101 tcgacttaac cgctttcacc gtcgggcttt tggagataac accgcaatat tccggcatcg
     5161 tgcgagcaaa gtcttcggtg ccaatctggc gagccaggtt gatgatgtgc tctttgtcgt
     5221 aagaaatcag cggacgcagg atcagcgtat cggagacgtt atcaatcagg cgcaggttgg
     5281 tcagcgtctg actggacacc tggccgagcg cttcgccggt gaccagcgcc tgtacgccgt
     5341 aacgttcagc cactttagac gcggcacgca ccatcatacg tttgaggata acgcccatct
     5401 gaccgtcgtc gattttctcg agaatttccc cgacgaccgg ttcgaaatta atagcgacaa
     5461 aacgcacgcg gtgggagctg ccaaaacggt tccacagata atgcgccacc tgacgcacgc
     5521 caatttcatg cgccgcgccg ccaaggttaa agaaacagta atgcacgcgg cagccgcgac
     5581 gcatcaacat ataactggaa acaccggagt cgaaaccacc ggaaatgagc gacagcacat
     5641 cttcctgggt gccgatcggg aaaccgccaa taccttcgta gcggccttta atcagcagaa
     5701 gacgatcgtc ttccacttcc agatggacag tcacttccgg attggtcagc ttcacgcgcg
     5761 cggactcaat atgctgattt aaaccgccgc cgacgtaacg ttccacatca atcgagctaa
     5821 aatcatgttt gccacggcgc ttcacgcgta cgcagaaggt tttgccttcc agctgatcgc
     5881 gatactgaac caacgctttc tcaaaaatat cgtgcatgtc ggtaaacggc acgtcttcga
     5941 cttcgagaat atggtggata cccggaatac gggtcagggc gtcgcgaata gccagacgct
     6001 ggttttcatc ttttgcacga acttcgatgt tatcccagtg gcggacgaca gcgagcgtct
     6061 catcatagtg ctttaaaacg ttacgaatgt tcccggtaag gatttttata aagcgcaagc
     6121 gcacagattg gcttttgatg gtgatttccg ggaacaattt aatgataaac ttcatggcgg
     6181 caatggttcg ttggcaagcc ttaagcgact tgtataggga aaaatacagc agcccacacc
     6241 tgcggctgca tccaggcgcg gaagtatacc actaacatcg ctttgctgcg cacatcacct
     6301 taccattgcg cgttatttgc tatttgccct gagtccgtta ccatgacggg gcaaaaaata
     6361 ttgagagtca gacattcatt atgccgaaga aaaatgaggc tcccgccagc tttgaaaagg
     6421 cgctgagcga gctggaacag attgtaaccc gtctggaaag tggcgacctg ccgctggaag
     6481 aggcgctgaa cgagttcgaa cgcggcgtgc agctggcacg tcaggggcag gccaaattac
     6541 aacaagccga acagcgcgta caaattctgc tgtctgacaa tgaagacgcc tctctaaccc
     6601 cttttacacc ggacaatgag taatggactt tccgcagcaa ctcgaagcct gcgttaagca
     6661 ggccaaccag gcgctgagcc gttttatcgc cccactgccc tttcagaaca ctcccgtggt
     6721 cgaaaccatg cagtatggtg cattattagg tggtaagcgt ctgcgaccct tcctggttta
     6781 tgccaccggt catatgtttg gcgttagcac aaacacgctg gacgcacccg ctgccgccgt
     6841 agagtgtatc cacgcttact cattaattca tgatgattta ccggcgatgg atgatgacga
     6901 tctgcgtcgc ggtttgccga cctgccatgt gaagtttggc gaagcaaacg cgattctcgc
     6961 tggcgacgct ttacaaacgc tggcgttctc gattttaagc gatgctgata tgccggaagt
     7021 gtcggatcgc gacagaattt cgatgatttc tgaactggcg agcgccagcg gtattgccgg
     7081 aatgtgcggt ggtcaggcat tagatttaga cgcggaaggc aaacacgtac ctctggacgc
     7141 gcttgagcgt attcatcgtc ataaaaccgg cgcattgatt cgcgccgccg ttcgccttgg
     7201 tgcattaagc gccggagata aagggcgtcg tgctctgcca gtactcgaca agtacgcaga
     7261 gagcatcggc cttgccttcc aggttcagga tgacatcctg gatgtggtag gagatactgc
     7321 aacgttggga aaacgccagg gtgccgacca gcaacttggt aaaagtacct accctgcact
     7381 tctgggtctt gagcaagccc ggaagaaagc ccgggatctg atcgacgatg cccgtcagtc
     7441 gctgaaacaa ctggctgaac agtcacccga tacctcggca ctggaagcgc tagcggacta
     7501 catcatccag cgtaataaat aaacaataag tattaatagg cccctgatga gttttgatat
     7561 tgccaaatac ccgaccctgg cactggtcga ctccacccag gagttacgac tgttgccgaa
     7621 agagagttta ccgaaactct gcgacgaact gcgccgctat ttactcgaca gcgtgagccg
     7681 ttccagcggg cacttcgcct ccgggctggg cacggtcgaa ctgaccgtgg cgctgcacta
     7741 tgtctacaac accccgtttg accaattgat ttgggatgtg gggcatcagg cttatccgca
     7801 taaaattttg accggacgcc gcgacaaaat cggcaccatc cgtcagaaag gcggcctgca
     7861 cccgttcccg tggcgcggcg aaagcgaata tgacgtatta agcgtcgggc attcatcaac
     7921 ctccatcagt gccggaattg gtattgcggt tgctgccgag aaagaaggca aaaatcgccg
     7981 taccgtctgt gtaatcggcg atggcgcgat taccgcaggc atggcgtttg aagcgatgaa
     8041 tcacgcgggc gatatccgtc ctgatatgct ggtggtcctc aacgacaacg aaatgtcgat
     8101 ttccgaaaat gtcggcgcgc tcaacaacca tctggcgcag ctgctttccg gtaagcttta
     8161 ctcttcactg cgcgaaggcg ggaaaaaagt tttctctggc gtgccaccca ttaaagagct
     8221 gctcaaacgt accgaagaac atattaaagg catggtagtc cctggcacgt tgtttgaaga
     8281 gctgggcttt aactacatcg gcccggttga cggtcacgat gtgctggggc ttatcaccac
     8341 gctgaagaac atgcgtgacc tgaaaggccc gcagttcctg catatcatga ccaaaaaagg
     8401 tcgtggttat gaaccggcag aaaaagaccc aatcactttc cacgccgtgc ctaaatttga
     8461 tccctccagc ggttgtttgc cgaaaagtag cggcggttta ccgagctatt caaaaatctt
     8521 tggcgactgg ttgtgcgaaa cggcggcgaa agataacaag ctgatggcga ttactccggc
     8581 gatgcgtgaa ggttccggca tggtcgagtt ttctcgtaaa ttcccggatc gctacttcga
     8641 cgtggcaatt gccgagcaac acgcagtgac ctttgccgcc ggtctggcga ttggtgggta
     8701 caaacccatt gtcgcgatct actccacttt cctgcaacgc gcctatgatc aggtgctgca
     8761 tgacgtggca attcaaaagc ttccggtcct gttcgccatc gaccgcgcgg gcattgttgg
     8821 tgctgacggt caaacccatc agggtgcttt tgatctctct tacctgcgct gcataccgga
     8881 aatggtcatt atgaccccga gcgatgaaaa cgaatgtcgc cagatgctct ataccggcta
     8941 tcactataac gatggcccgt cagcggtgcg ctacccgcgt ggcaacgcgg tcggcgtgga
     9001 actgacgccg ctggaaaaac taccaattgg caaaggcatt gtgaagcgtc gtggcgagaa
     9061 actggcgatc cttaactttg gtacgctgat gccagaagcg gcgaaagtcg ccgaatcgct
     9121 gaacgccacg ctggtcgata tgcgttttgt gaaaccgctt gatgaaacgt taattctgga
     9181 aatggccgcc agtcatgaag cactggttac cgtagaagaa aacgccatta tgggcggtgc
     9241 aggcagcgga gtgaacgaag tgctaatggc ccatcgtaaa ccagtccccg tgctgaacat
     9301 tggcctgcct gacttcttta ttccgcaagg aacgcaggaa gaaatgcgcg ccgaactcgg
     9361 cctcgatgcc gccggtatgg aagccaaaat caaggcctgg ctggcataat ccctactcca
     9421 ctcctgctat gcttaagaaa ttattcatgg caggagtggc agcatgcaat acaacccctt
     9481 aggaaaaacc gaccttcgcg tttcccgact ttgcctcggc tgtatgacct ttggcgagcc
     9541 agatcgtggt aatcacgcat ggacactgcc ggaagagagc agccgtccca taattaaacg
     9601 cgcactggaa ggcggcataa atttctttga taccgccaat agctattccg atggtagcag
     9661 cgaagagatc gttggtcgcg cactgcggga tttcgcccgt cgtgaagacg tggtcgttgc
     9721 caccaaagtg ttccatcgcg ttggtgattt accggaagga ttatcccgtg cacaaatttt
     9781 gcgctctatc gacgacagcc tgcgacgtct cggcatggat tatgtcgata tcctgcaaat
     9841 tcatcgctgg gattacaaca cgccgatcga agagacgctg gaagccctga acgacgtggt
     9901 aaaagccggg aaagcgcgtt atatcggcgc gtcatcaatg cacgcttcgc agtttgctca
     9961 ggcactggaa ctccaaaaac agcacggctg ggcgcagttt gtcagtatgc aggatcacta
    10021 caatctgatt tatcgcgaag aagagcgcga gatgctgcca ctgtgttatc aggagggcgt
    10081 ggcggtgatt ccgtggagcc cgctggcgcg ggggcgactg acgcgtccgt ggggagaaac
    10141 taccgcacga ctggtgtctg atgaggtggg gaaaaatctc tataaagaaa gcgatgaaaa
    10201 tgacgcgcag atcgcagagc ggttaacggg cgtcagtgaa gaactcggtg caacacgagc
    10261 acaagttgcg ctggcttggt tgttgagtaa accgggcatt gccgcaccga ttatcggtac
    10321 atcgcgggaa gaacagcttg atgagctatt gaacgcggtg gatatcactt tgaagccgga
    10381 acagattgcc gaactggaaa cgccgtataa accgcatccg gtagtaggat ttaaataaga
    10441 gtccaggcct gatgagacgc aacaagcgtc acatcaggca tcggtgcaca actacgacag
    10501 aatgcccagc ggccagtgat gaccaataaa gtacaggatg ccagcggaga tcaccccggc
    10561 gacaatatca tctatcatga tccccatgcc gccatgcaca ttgcgatcaa accagcggat
    10621 cggccacggt ttccacatat ccagaatacg gaaaatcaca aacccggcgg caacccactg
    10681 ccagtcattg gtcggcagcg ccatgagcgt gatccacata ccaataaatt cgtcccagac
    10741 aatgctgccg tgatcgtgca cgcccatatc ttttgcggtc tgatgacaaa gatagacgcc
    10801 gatacagatc cccagcatca ccaccagcga gtagagctgc cagggcaaaa aggtcatcag
    10861 ataccagaac ggaatcgctg ccagcgagcc catcgtccca ggaacgatcg ggcttaatcc
    10921 acttccgaat ccgacagcaa gtagatgcca cggattactc atcttcaggc gacttttcgc
    10981 gacatcttta tggcgtggca aaatggtcat atcctttcca gtctaacgta acaggttcac
    11041 cgtcacgaat aaaacaaagc ccttcgatat cggcggtcat ttgcccgata caggtaaacg
    11101 gtacgcccag gtgtccgaga gccacatcca gcgctccacg gttcagttcc ggcaccgtga
    11161 aacacaactc gtaatcttca ccgccagaga gcgcccagcg cagcgcctgt tccggttcaa
    11221 catggcgaga aagcgcatca gaaaacggca gcaatgccag gtcaatacgt acgccgcagt
    11281 cgctggcttt cacgatatgc ccgagatcgg aaatcagacc gtcagagaga tcgatagctg
    11341 aatttgccag atcgcgcagt gcctgcccct gtaaaatacg cggcgatgga cggagatgac
    11401 gtttgatcaa gtagtccgca tctttagcat cggcaacctg caaacggttt tgcaaaatcg
    11461 ccagcccggc ggcgctatcg cccggtgtac cggtcacata gatccagtca cccggtttcg
    11521 ccccagagcg cgttaaggct cgtcccatcg gaacaaagcc gtggataccc aacgtcattg
    11581 ataatggccc acgcgtggta tcgccgccaa tgagttgcat atcgtaataa ttgagaagat
    11641 caaacaaact gtcgctgaag gactcaagcc acgcttcgtc tacgtccggc aaggttaatg
    11701 ccagcgtcag ccaggccgga tcggccccca tcgctgccag atcgcttagg ttcaccgcca
    11761 gtgctttata cgccagatca gcaggatcga tatcagggag gaagtggttg cccgccacca
    11821 gcgtatcagt gctgatcgcc agggtctgtt tctcggggat attgagaagt gcgcaatcgt
    11881 cgccgatgcc cagttcgaca tcaagacgag aacttcttac acggtcaaaa taacgggcaa
    11941 tcagggagaa ctcgccacat gccatacgtt atgcctcagc aggtaaaaaa gaaaaggccg
    12001 gcgatcatgg aacggtcttc cgtgaatcta ccggcctgga tattactttt tgttagggcg
    12061 aatcacaggt gctgctttat cgagtacacc gttgacgaac ttatggctgt cttctgcgcc
    12121 gaacgatttc gccagttcga tcgcttcgtt aatggccact ttgtatggca catcgctacg
    12181 tttagacagt tcgtacagcg caatgcgcag tactgctttt tctacctgtc ccagttcttc
    12241 cagcagacgg gacaggtatg gcttcatcag tccgtcgagg tatgcggtat tagtcgccac
    12301 cccggccagc agctcacgga agtacaggac gtcaacgtct tttacatcct gttcagccag
    12361 gaactggtat tcaacatcag cgatgtcgtt ctgggacaac tgccaggagt agagcgcctg
    12421 gacggcacac tcacgagcgc ggcgacgagc agcaggtttc acggatttcc ccttactaat
    12481 ttcaggcctt gatggctttc aatacattaa tcatttcaag cgcggtcagt gcagcttctg
    12541 cacctttgtt gccagctttg gtgccagcac gttcgatcgc ttgttcaatg ctttcagtgg
    12601 tcagaacccc aaaagcaacc ggaatttcgc tgtcctgggc aacatgcgcc aggccgttgc
    12661 ttgcaccacc agcgacatat tcaaaatggg cagtgccacc acgaataacc gtacccagcg
    12721 caatcaccgc gtcgtattta ccggttttag ccagtgcacc cgccgccagc ggcagctcat
    12781 aggcaccagg cacccaaaca acggtaatgt tttcatcttt tacctgaccg atacgtttca
    12841 gtgcgtcaat tgcaccttcc agcaggctgt cattgataaa gttgttgaaa cgcgcgatgg
    12901 tgatggcgac gcgagcgtcc ggggtagcaa cgttagcttc aataatgttc attttcttcc
    12961 ttcgggttcg agtatggccc cgcagggggg cggattttag cataatattt cgtgcgctgc
    13021 ttccctttcg agccgggaga tcatgcaccc actaaatgca ggcaaacatc cgggcctaca
    13081 tgacgtatct ctttgaattt aaattggggg gcgtcggcta atttctcaag ccctggcagg
    13141 gtgcataatc cacgggcgtc gctgcctaat agtttaggtg cgatatagac aatcagctca
    13201 tcgactaaac ccgcctgcag caatgcgcca gcgagcgttg gccccgcttc cccccagatg
    13261 ctgttaatct gctgtttacc cagttgcatc atcagtacaa ccagatccag atgaccttta
    13321 tgctctggaa tcagcaaggt acgcaccgtt tccggccact cacgagaatc ttcctgcgta
    13381 cgcgcgaacc aggtttcgcc gggctgctgc acaatgtgat gttccggcgt cacgcgattt
    13441 tggctatcaa tcacaatacg taccggctgg cggagatttt gttgcgggta gagcgcctga
    13501 gtttgttcat ccagttcgga ccaacgcacc gttaaggcag gatcatccgc cagcaccgtg
    13561 gcgctgctgg ttaaaatggc atgactttgc gcgcgcagtc gttgtacatc acgccgcgcc
    13621 tggggcgaag tgatccactg gctttcgccg ctcgccatcg ccgtgcgacc atcaagcgat
    13681 gcgccaagtt ttaactgaat ataaggaaag ccggtgcgca tccgcttgag aaagccttta
    13741 ttcaattgct cggcttcact catcatcagg ccgtggctga cgtcaatgcc agcctgttgc
    13801 agacggtaaa gtccacgccc agcgacctgc gggttaggat cttgcatcga ggcaaccacg
    13861 cgcgccacac ctgcggcaat taaagcatca cagcaaggcg gcgtacggcc gtgatggctg
    13921 caaggttcga gtgtcacata cgccgttgca cctttggctt tttcacccgc catacgcaac
    13981 gcgtgtactt cggcatgtgg ttcacccgct cgttgatggt aaccttcacc gacaatttcg
    14041 ccatctttga caatgacgca cccgacattt gggttggggt gggtggtaaa acgtcctcgt
    14101 tgcgccagct ttagcgcccg cgccatgtaa tactcgtcct gcacggctta gtcctccagg
    14161 cgcgcgatct cttcgccaaa ttctttgata tcttcgaaac tgcggtagac agaggcaaaa
    14221 cggatatagg cgactttatc gagctttttc aattgctcca tcaccagatt gccaatcatc
    14281 ttgctcggta cttcgcgctc accggtggcg cgcagctgcg atttaatatg attgattgcc
    14341 atttcaacgt catcggaact caccggacgt ttttccagcg cccgcagcat tccgctacgc
    14401 aatttctctt cattaaacgg ttcacgcacg tcgttgcttt ttacaacacg cggcataacc
    14461 agctccgcca cttcaaaggt ggtgaaacgt tcattacaca ccagacactg ccgacggcgg
    14521 cgtacggatg aaccctcgcc cacgagacga gagtcaatta ccttagtgtc cacggcgaaa
    14581 cagaatgggc aatgcatacg gcgtcctgac caagtggtta acggaaatct attttaccct
    14641 gaactgacga tacaacaaag gcgcaacgct tttgagataa aggatcgatg ctttcgctgc
    14701 ttttaccctc taccattagg ctaattgcga cgagaaaggg acgacctatg aatactaacg
    14761 tttttcgact gctcctgctg ggaagcctgt tcagccttag cgcctgtgtg cagcaaagtg
    14821 aagtgcgaca gatgaaacac agcgtcagca cgctgaacca ggagatgacg caactcaatc
    14881 aagaaacagt caaaatcact cagcaaaaca ggctgaatgc aaaatccagc agtgggggtt
    14941 accttctgcc tggagcgaaa acaccggcaa gactggaaag ccagatcggt actttacgta
    15001 tgtcgctggt gaatattacg cctgatacag atggcaccac ccttacacta cgtattcagg
    15061 gtgagtcgaa tgatcccttg cccgcattca gcggaactgt tgaatatggg caaattcagg
    15121 gaacaataga caactttcag gaaatcaatg tgcagaatca attgattaat gcccctgcca
    15181 gcgtcctcgc ccccagcgat gttgatattc cgttacaatt aaaggggatt tctgtggatc
    15241 agttaggctt tgtacgtatc cacgacattc aacctgttat gcagtaaacg tatttcggga
    15301 cgattttgtg cgtcccgcaa catctttccc cgtcattttg ttactctgct tacatcacct
    15361 ggattgatag taaaagtttg caacaagggc gaaagtcagt acaatccccg cccgaatgtg
    15421 tgtaaacgtg aacgcaatcg attacgtaaa tgatagaact gtgaaacgaa acatattttt
    15481 gtgagcaatg atttttataa taggctcctc tgtatacgaa atatttagaa acgcaatttg
    15541 cgcctttttc actcccgcaa gggattttca aacagtggca tacatatgaa aaaaacatta
    15601 ctggcagccg gtgcggtact ggcgctctct tcgtctttta ctgtcaacgc agctgaaaac
    15661 gacaaaccgc agtatctttc cgactggtgg caccagagcg ttaacgttgt cggaagctat
    15721 cacacccgtt tcggaccgca gatccgcaac gatacctacc ttgagtacga agcattcgct
    15781 aaaaaagact ggttcgactt ctatggttat gcggatgcgc cggtattctt cggcggtaac
    15841 tccgatgcta aaggtatctg gaaccacggt tctccgctgt ttatggaaat cgaaccacgt
    15901 ttctccatcg acaagctgac caatactgac cttaacttcg gtccgttcaa agagtggtac
    15961 ttcgcgaaca actacattta cgacatgggt cgtaataaaa atggtcgcca gagcacctgg
    16021 tacatgggtc tgggtaccga catcgatact gatctgccga tgagcctgtc catgaacgtc
    16081 tatgcgaaat accagtggca gaactatggc gcagcgaacg aaaacgagtg ggacggttac
    16141 cgtttcaaaa ttaaatactt tgtgccgatt accgatctgt ggggcggtca gctgagctac
    16201 atcggcttca ccaacttcga ctggggttcc gatttagggg atgacagcgg taacgcaatc
    16261 aacggtatta agacccgtac taataactct atcgcttcca gccatattct ggctctgaac
    16321 tacgatcact ggcactactc tgtcgtagct cgttactggc acgacggtgg tcagtggaac
    16381 gacgatgcag aactgaactt cggcaacggc aacttcaacg ttcgctctac cggctggggt
    16441 ggttacctgg tagtaggtta caacttctga ttatgaaaat gccgggattt attcccggca
    16501 tttctgattg ttaacaacgt gagctttgtt catgccggat gcggcgtaaa cgctttgtcc
    16561 ggcccacaaa agcacgtaaa ttcaatatat tgctgaaata acgtaggcct gataagcgta
    16621 gcgcatcagg caattttacg ttttaatcac ttcttcttgt tcatcatcgc tttcaggtca
    16681 gcgaatgggt tgtacttcgc ttcaccgaca tctttctgcg catcttcccc tgcgataacg
    16741 gtcgtaccat actgatccgc ttcggtatat ttcgaatgct catgatcgtg gcaatagaga
    16801 caaagcaatt cccagttact gccatcttcc gggttattgg tatggtcgtg atcaatgtgg
    16861 tgaacggtaa gttcacgcag gttggaataa acaaactcgc gggaacagcg accgcagacc
    16921 cacggatata tttttaatgc tttttcgcga tagccgcttt ctaaccgcgc atagtttttt
    16981 gggatgatag ccatgaagag ttacctggat gaaatgtagg gttacgcgca gtttcccaag
    17041 atgcggggat tttcgcaatc tccatacatc aaaaaaaatc ccgatcttct gaccgggatt
    17101 ttcaacatca acgggaactt gattacggca gaattgacgg ctgatccgcc ccttcttttt
    17161 ccactttctg ctgcaacatg tgttcgcgct tcatacccag tttcagagcc aacgcagatg
    17221 ccacatagat ggaagatgca gtaccgatgg aaacaccgat aagcatggtc agcgagaagc
    17281 cttccagtac cggaccaccg aagaggtaca gcatcaggat aaccatcaag gtagtaccgg
    17341 atgtgatcaa ggtacggtgc agcgtctggg tcaaggacac gttaaagatt tcgtaaggcg
    17401 taccgcgacg gatcttgcgg aagttttcac gaatacggtc cgataccacg atactgtcgt
    17461 taagcgagta accgataacc gacatcaacg atgccacaat ggtcaggtca atctcgatat
    17521 ggaataacga caaaataccc agcgtaatga taacgtcgtg cgccagcgca ataacaaccc
    17581 ctgccgccag tcgccactca aagcgaaaac ctacgtacac aaggatagac agcagcgccg
    17641 ccatcaacgc catcgcaccg gtttgcgtaa ggtcttcccc cacgctcgga ccgacgaact
    17701 caatacgctt cactgctgca ttctgattgg tggattcgtt aatcaccttc agaacctggc
    17761 tgcccagcac ctgaccgccg gtttcgcctt cagcaggcgg catacggacc atgatgtcgt
    17821 ggctgctacc aaagttttgc agcattggct cttcaaaacc ggctttttgc aatgcatcac
    17881 gcattacgtc aatttcagcc ggtttttcga gcgtaatttc gataaccgta ccaccggtga
    17941 aatccagccc ccagttaaag ccgcgcacgc ccataataac gatagcggcg attaacagca
    18001 gaccagagat gccgaaagcc cagtagtccc agcgcataaa gtcatagact ttacggccgt
    18061 ggtttagttg ttcaacagta tattcctgtg ccacatcgca ctcctcagat tgacagcttc
    18121 ttgacgcgct tgccgccata tagcaggttt acgatggcac gcgtaccgac aatcgcggta
    18181 aacatcgacg tcgccacacc gataccggta gtaatcgcga accctttaat tgccccggta
    18241 cccactgcgt acaggatgat gactttaatc agcgtggtga tgttcgcatc gaagatagaa
    18301 ctgaatgcgc cacgataacc ttcatcaatt gcctgttgaa cagtacgtcc gttgctcaac
    18361 tcttctttaa tacgttcgtt gatcagtacg ttcgcatcga ccgccaccgc aagggttaag
    18421 acgatacccg cgatacctgg catactcagc gttgcgcctg gcaacagcga cataatgccg
    18481 acgattaaga tcaagttggc aatcagagca ctggtcgcaa tcagaccaaa cttcttatag
    18541 aagatgatca tgaacagaat agaaaccagc agaccggcaa ggcaagcctc cagcccctgt
    18601 tcaatgttct gcatacccag ggttgggcca atggtacgtt cttcaacaat ctgaatcggc
    18661 gcgatcaacg caccggcacg cagcagcagt gacagctgac gggcttcgtt cgggttgttg
    18721 atgccggtga tacggaagct gttacccaga cgagactgga tgttggcgat gttaatcacc
    18781 tcttcctgtt tcaccagaac cgcacgacca tttgcatctt tcttaccgct gtctttgtac
    18841 tccacaaaca gggttgccat cggtttgccg atgttgtcct tagtgaagtt agacatgatg
    18901 ttaccaccag cgctatcgag cgagatgtta acctgcggtt ggttgtattc gtcctggctg
    18961 gaagtggagt cggtgatatg gtcaccggtc agaattacgc gtttgtacag cacaactggc
    19021 tgaccttcgc gggtctgttt cacttcagag tcgcccggta cgcgaccgga tgccgcagcg
    19081 gcctggtcaa cgttggtgtt taccagacgg aattccagcg ttgccgtcgc acccagaatc
    19141 tctttcgcac gcgcagtgtc ctgaatacct ggcagttcaa caacgatacg gtcagcaccc
    19201 tgacgctgaa ccaccggctc cgctacgcca agttggttta cacggttacg caggatattg
    19261 atgttctgct gcaccgcata ttcacgcgct tcactcagac gagcatcgct cattaccgca
    19321 cgcagctggt tgctgccctg gctactaatc accaggtccg gatggcgctt gctcagatac
    19381 gcaatggctt catcacgagc tttagcatcg cggaaagtaa tgctcaggcc gtagttgttt
    19441 tctttacgaa cggtggtata cgggatgccc ttttcacgca gatcgctgcg caggctatcg
    19501 atattttgtt cctggagttt gccaagcgcg gtgtccatat ccacttccat caggaagtga
    19561 acgccgccac gcaggtcaag gccgagcttc atcggctcag cgtgaatagc tgccagccag
    19621 cgcggcgttg ccggggcaag gttaagcgcc acgacgtatt tgtcacccat aacgcccatt
    19681 aatgcttcac gagcgcgcag ctgggtgtca gtggagtcga agcgcgcaag aatagcgccc
    19741 tcttccagtg ccacagactt agcagttatt ttttcttctt gtaacgtttt ctggacctgg
    19801 atcagcgttt gctcactggc ggcgactccg cgcgcaccag tgatctgaac agccggatcc
    19861 tcaccaaaca ggttgggaag cgcatacagc agaccgatga caatcaccac gatcagcatg
    19921 acgtacttcc acaaaggata acggtttaac acggcaattc ccttagggaa aaattttaat
    19981 tacagcgcct tcatggtgcc tttcggcagg acggcagcta cgaagtcacg tttaataact
    20041 acttcagtgg tgtcattcag cgcgatagca atgtagccgt tttccgctac tttggttacg
    20101 cgaccaacca ggccaccgtt cgtcagaact tcatcacctt tggcaatgga gtccatcagc
    20161 tttttgtgtt ctttggtgcg cttctgctgt ggacgcagga tcatgaaata gaaaatcaga
    20221 ccgaatacca ccagcatcaa aatcaaagac atcgggctac cttgcgccgg tgcacccgtt
    20281 gccgctaccg catcagaaat aaaaaagctc attaaatttc cctcattatt aatattaatc
    20341 aacgttcaaa ggtggtactt ctcgcccctg acgctggtaa aaatcagtta cgaagctctc
    20401 taatttaccc tcttcaatag ccttgcgtaa acccgccatc aaacgctggt agtaacgaag
    20461 gttatgaatg gtgttgagtc gcgcgcctaa tatttcgttg caacggtcaa gatgatgcaa
    20521 gtaagcgcgt gaataattgc gacaggtgta gcaatcacac tcaggatcga gtgggccagt
    20581 atcgctctta tacttcgcat tgcggatttt caccacgcca tcggtcacga acaaatgacc
    20641 atttcgggcg ttgcgggttg gcattacgca gtcaaacata tcgataccac gacgtacgcc
    20701 ttcaaccagg tcttctggtt taccaacgcc catcaggtaa cgcggtttgt ctgccggaat
    20761 ttgcgggcat acatgctcca gaatgcggtg catatctgct ttcggctcac ccacagccag
    20821 accgccgaca gcgtagccat caaaaccgat atctaccaga cctttaacag aaatatcacg
    20881 taaatcttcg taaacgctgc cctgaatgat accaaacagc gcatttttgt ttccgagact
    20941 gtcaaaacgc tcacggctac gcttcgccca acgcagagac atctccatgg agcgttttgc
    21001 gtaatcccag tcagcaggat acggcgtaca ctcatcaaag atcatgacga tatccgaacc
    21061 aagatcgtac tgaatctcca ttgatttttc aggatcgagg aaaatcggat cgccgttgat
    21121 cgggttacgg aagtgcacgc cctgttcggt gattttacga atatcgccaa ggctgaagac
    21181 ctggaagccc ccggagtcgg tgaggatcgg ccccttccac tgcataaaat cgtgcagatc
    21241 gccgtgcagt ttcatgattt cctggcccgg gcgcagccac aggtggaagg tgttgccgag
    21301 gataatttgc gcgccagtgg cttcaacttc ttccggcgtc atccctttta cggtgccgta
    21361 ggtgccaaca ggcataaaac aaggcgtttc cactacgcca cgatcaaaga ccaggcggcc
    21421 acggcgtgcg cgaccgtcgg tggtgtccag ttcaaatttc attttttctc cactacgtca
    21481 gaaaaacagt ccaacgtttt aaaccagcgc cgcggaatta ctccccgacg cgctcattaa
    21541 ttgcctgcgg attgtacgta ataaacatcg catcaccgta actaaaaaag cgatatttct
    21601 cttctaccgc tgctttatag gcgttcatgg tgtgttgata accggcaaag gccgaaacca
    21661 gcataatcag cgtcgactct ggcaagtgga agttcgtcac cagcgcatcg accactttgt
    21721 actggaagcc cggatagata aagatttggg tatcgtcgaa gaacggttca atgagatcgt
    21781 ttttcgctgc ctgagccgcg ctttccagcg aacgtactga agtggtgcca accgcaatca
    21841 cccggttacc gcgcgctttc gccgccagta ccgcgtctac cacatcctgc ggtacttcag
    21901 cgtattccga gtgcatgatg tgatcttcaa tggtgtcgac gcgcaccggc tggaaggtgc
    21961 ccgcaccaac gtgcaacgtc acaaacgcca tctccacgcc tttggcgcgc aatttttcca
    22021 gcaaaggctc gtcaaaatgc agaccagcgg tcggggctgc aaccgcgccc ggtttttcgc
    22081 tataaacggt ttgataaagt tcgcggtcag cgtcttcgtc cggacggtcg atatacggcg
    22141 gcagcggcat atgcccgata ctgttgagga tatccagtac cgaacgatca tcattgaatt
    22201 cgacttcaaa cagtgcgccg tggcgcgcgg tcattgttgc gttaatactt tcgtcatcgc
    22261 ccagcagcag ttctgcgcca ggttttggcg ctttcgaggc gcgaatatgc gcaagaatgc
    22321 gtttgtcgtc gagcatccgc tcaaccagca cttcaatctt gccgccgctg gctttacgcc
    22381 caaacaggcg cgccgggatc acgctagtat tattaaaaac cagaagatcg ccggggttga
    22441 gcttatcgag taaatcggtg aaagtaccgt gcgtcagcgc gcccgtaggc ccgtccagcg
    22501 acagtaaacg acagctactg cgttcaggca tggggtagtg ggcaatcagg gattcgggca
    22561 attcaaagaa gaaatcggta acgcgcatga cactgactca gactaaaata agaggcgggt
    22621 agtctagtgc cggggcgctc tccctgcaac ctttaccccc ctttggatag aatataatcg
    22681 atgaattttt tagctcacct gcatttagcc catctcgcgg aaagctcgct ttccggcaat
    22741 ttactggctg atttcgtacg cggaaatcct gaagaaagtt ttccgcccga cgtcgtggct
    22801 ggcattcata tgcatcgacg tatcgacgta ttgactgaca atctgccgga agtccgcgaa
    22861 gcacgggagt ggtttcgtcg tgaaacgcgc cgcgttgcgc ctattacgct ggatgtcatg
    22921 tgggatcact ttctttcccg ccactggtcg cagctgtcgc cggactttcc gctacaggaa
    22981 tttatctgtt atgcccgcaa gcaagtgatg acgattttgc cggactcacc gccacgtttt
    23041 atcaatctaa acaattactt gtggtcagag cagtggctgg tgcgctatcg cgatatggat
    23101 ttcatccaga acgtgttaaa cggcatggca agccgtcgcc cacgtctgga tgccctgcgt
    23161 gactcctggt acgatttaaa cgcccattat accgccctcg gaacccgctt ctggcagttt
    23221 tatccgcgga tgatggcgca ggcgtcacac aaggcgttat aaaacgttag ttcatccata
    23281 ccgtagccga aatggcaggc aaagccagaa tcccgtcagt cagttgccca tgcccttctt
    23341 tgcattgcca ttgcacggca ttgagaaacg gtgacgcggg tagcaccact tcacaggcct
    23401 cgccacggtt gattgccacc agtacacgtt gctgattcag cacgcggaca aataccacta
    23461 cgttatcttc cgcatacagc acctgacagc cgccacgacg cagcgcctga cttttcttac
    23521 gcagcacaat cattcgccgg tacagcgcga ataacgccgt atcctgcttt tccacctgcc
    23581 aggggaacgg tttacggcaa aacggatcgt ttttaccatc cagtcccact tcatcaccgt
    23641 aataaatgca cggtacacca ggccaggtga acagccagac caccgccagc ggcaggcgcg
    23701 caatatcccg accgagcagc gttttaaatc gcgcagtatc gtggctgtcg agctgattaa
    23761 acatacgtaa ttgttgttga tgagaaagcc ctgcgcggta attatccatc caggccatac
    23821 aggtttgggc atcaatttgc tgcggatcgt aagagatatc ggtattggca agaaatcccc
    23881 acaacgggaa tgtgaagcca cgatagttca tggcggcatc ttccacatcg gcctgtaacc
    23941 attgccgtgc atcgccaaaa tgttcgccga caatatacgc ttccggctgg gtttctttcg
    24001 ccgcttcggt gatcccagca acgtgctgca tattattgcg cgccccaccc gcctccccca
    24061 gcatatgcac cacatccagc cgccagccgt ccatactcca cggcgctgtc agccaatggc
    24121 ggacaatact gtcttccccg cgataaattt cattcaccag actttccgac tgataatcca
    24181 gcttcggcaa gctggcatag ccaagccagt cgagcgccgt gccatcatca ctaaacgagt
    24241 accagtcgcg ccagggcgat tcagggttgt aacaagctcc ccccgtgcca cgattgtgcc
    24301 tgtcaaacca ggcatgggaa tcgccactgt ggttaaacac gccgtccagc accagccgca
    24361 ttcccagctg ctgcgtattg tgtcgcaaac gcagcaacgc cccatcaccg ccaaactgcg
    24421 gatcgacatg gcgataatcc tcggtatcgt attgatgtac gctgggagct ttaaacaccg
    24481 gattgagata cagcgctgtc acgccaagct ttttcagata cggcagtttt tcgcttatcc
    24541 cgtccagatc gccgccatag aacgttgatc cgcccgcctg cgccgtgacc ggttcatccc
    24601 agtcacgcaa gatgatctct tgtccggctg catgatggta atagacatga tcctgttcag
    24661 cttcacgagg aagactacgc gcaaaacgat cagggaagat ctgataaaaa atctgatccg
    24721 cagcccattg tgggccgata tccggtacat cgacggcaaa ctgctccagt cgtgccggcg
    24781 gcattcggct gaagccctgc ggtgacgcct ggctgcggct gactgcgctg cttatgcatt
    24841 ggtactgaca tttcttcgtt atcgtgttct gtacgcagca taatgcgctg cggtgggtct
    24901 tcgcccgtca gccacagtgt aatgagcagt tgatctttgc tttgtttaac aaatgggggc
    24961 accggcaggt gccatgcatt taacatcata attcccctgt gatgaaaatc tgatcacctt
    25021 gccatagcct aatgcaggat cactcatcat ctgaaggata tttgggggag gaggacgggg
    25081 gcggataact ttcggaatag ccggatcagg atttcctcct gaaccggctt acagaacgca
    25141 aggattactg gttttcagcc agctgacgat cgtggcgacg cttaaacatc cagccaatca
    25201 acagcacaac aatccacgcg aaaccgacat acagcgagat acgcgtatcc gggtgataac
    25261 caatcaaccc gataataaag agcaggaaaa tcagcccgcc gatggtcgtt gctaccccac
    25321 ccggcacttt aaatttcagc gccttaactt cttctggcgg caaacggcga cggaaggcga
    25381 tttgcgacag caggatcata atccacaccc ataccgtggc gaaggttgcc agcgaagcga
    25441 tcaccaggaa gacgttttcc ggcatgatgt agttcagata caccgcaaac agcagcgcgg
    25501 tagtcatcac cagcaccgta acccacggaa taccgcgacg cgacgttttg ctgaaaattt
    25561 tcggtgcgct gccctgctct gccataccgt ggagcatacg gcctacgcca aatacgtcac
    25621 tgttaattgc cgacagcgaa gcggtcagca caacaaagtt aagaatgctg gcggcaaagg
    25681 taatgcccat atgctggaac gtcagcacga acgggctacc ggcagtgcca acctgattcc
    25741 acgggtagat agacataatg acgaacagcg taccgacgta gaacaccaga atacgcatcg
    25801 gcacggagtt aatcgcacgc ggaatcgatt tctcaggatc tttcgcttca ccggcggtaa
    25861 tcccgataat ttcgatccca ccgtaagcaa acatcaccat ttgcaacgac attaccatgc
    25921 caagccagcc gttactgaag aagccgccgt tgctccacag gttatgaata ccggtcggtt
    25981 gcccgccgtt gccaatcccc cagatgatga tgccgaaacc ggcgacaatc atgatgatga
    26041 tggtggcgac tttaaagaac gagaaccaga attccagctc accgaatacc ttcacgctca
    26101 tcaggtttac ggcgcaaatg atcagcacca cgctcagtac ccaaatccag tgcggcaccg
    26161 tcgggaacca gacacccata tagataccaa aagcggtcac atcggcgatg gcgacaatta
    26221 ggatttcaaa gcagtaggtc cagccggtaa tgtaacctgc cagcgggccg aggttttcct
    26281 gcgcataacg cgagaaagag ctggcggccg ggttatgtac cgacatttcc cccagcgcac
    26341 gcataatgat atacgccgcg ataccaccga taatataggc caacaacacg ctcggaccgg
    26401 ccattttgat ggcgtctgcc gaaccgtaaa acagcccggt gccaattgct gaacccagtg
    26461 ccataaagcg tatgtggcgg gtacttagcc cacgctttag cttgttctta ctttccatca
    26521 attcctaacc catcaacaca ataaaaaacc acggggcatc gcagccccgt ggttaaaaca
    26581 aatgttcagt gatttagtga gcgctggagg tcacctgacg acctgccgcg cgatcccaga
    26641 taatggccag aaccaccatc accactgttg gcattaacca cgccaggcct tgttcggcca
    26701 gcggtaaacg ctgcgcccag gacggtaaga tatcgctgaa tgcagatgct ttgatcccgt
    26761 cgagaatacc aaaaagcagg ctgataaaca tcggcggggc aatcacgcgg gacgaattat
    26821 gccaccatga gcgtgtaaaa cttaatacaa ccagtgcgat acacggcgga taaatagcgg
    26881 tcagcaccgg tacggagatc tggatcagct ggcttaagcc gaggttagac accaccatcg
    26941 agaagccgcc gaggataaac accagcgtac gataagagag cggtacgttc tgggcaaaga
    27001 attctgcaca agcacaggtc aggccaactg ccgttaccag gcaggcgatg aagattaacg
    27061 ccgccagcag gaagctaccg ccgccgccaa atgtgtgctg aacgtaagca tgcagaatag
    27121 cagcgccgtt tgcagactga tcgaccagcg acgcgctgtc tgaacccaga cggaacagcg
    27181 ccaggtacag cagagtcaga ccaacacccg ccatcaggcc agcccagacg gtataacggg
    27241 tcagcagacg cgcttcggta acgccacgag aacgcgccgc gttaacaata acgataccaa
    27301 acaccattgc gcccagcgta tccatggtca gatagccgtt aacgaagccg ttagaaaacg
    27361 cagcgttttg ataagcctca gtcgccgtgc tgatagaacc cgccggccag acaatagcgg
    27421 caacagacag gatgaccagc gcgataattt tcagcggcgc aaggaagttg cccacggtat
    27481 ccagcagctt gcccggatag agcgaaacca gaataacgat agcgaaatag accaggctgt
    27541 agataaacag cggcagcgcg gaatcacccg tcagcggcgc aatccccact tcaaaggaaa
    27601 cggtagctgt acgcggcgta gcgaaaagcg gccccaccgc caagtaacaa accgttgcca
    27661 gcagcacgcc agcgacttta ccgattggcg tgctgaggct gtcaacaccg ccgccaactt
    27721 ttgccagcgc cactaccgtt aataccggca ggccaacggc agtaatgagg aagccgaatg
    27781 ccgcagtcca gacgtgttcg cctgcctgca agccgaccat tggagggaaa ataatgttac
    27841 ctgcgccgac gaacaacgca aatgtcataa agcccagagc gatgatatcg cgcgatctta
    27901 attgatgggt cataaatcat actgcctgtg gatgtggtgt tgtaacgtta aatttttgtg
    27961 ccaatccctg gggatgatac agcggtatat ttaaacaatt ttagcgggaa atactcccaa
    28021 cctggcgcgg cgaagaatag tttttcgatt taccgcgtta atgcagtcag tatgacagca
    28081 cctgaagcgc aatttaaacg cttataacgt tttaaagcaa ggagggatct aaaaaccaga
    28141 ggtatatagc gataagaaat caccaaccag tataaaacac tatttccgtg aaaaagacat
    28201 ggctaatcat gcgaacaaaa aatcaccaac cgttgtaaaa tctaacgccc gtattttgac
    28261 tgcaaagaaa ataagccagc atcgactggc ttatggcaat aaaagatgac aaaggcggat
    28321 taatcgctgt ttttggcaat taaacgttcc gggataacaa aactgaaacg tgttcctttt
    28381 cctactgtac tctcaatatt caggcgactt tcgtgatgat tcacagcatg tttcacgatc
    28441 gctaacccta atccgctacc gccggtttgc cgggaacgcg ctttatcaac gcgataaaaa
    28501 cgctcggtca ggcgcggaat atgctccggt gcaatgcccg gtccgttatc ttcaacgcta
    28561 aattcggcac cgtgcggcac tcgctgccag cgtacggtga tatgcgtgcc ttctggagta
    28621 tgattcacgg cgttatagac caggttcgaa atcgcactgc gtagctgatc ttcgttgcca
    28681 gacactttga ggccgttatc tatctcaaag gtaaatgtct gttttttctg actcagagtc
    28741 tgagcctcgc gctcaacaac gcgcagcatc atcggcacat caaccttttc attgagcaat
    28801 tgcgtcggcg cggcttcaat tttcgacagc gttagcaact gcttcaccag cccttccatc
    28861 cgctgggtct gctcgcgcat ggtgtgcaac gctttttcgc gtaccgcgcc ttccagcggc
    28921 tgctcatcca tcatctccag gtaaccctgt aacacggtca atggcgtacg taactcatgg
    28981 ctcacgttgg caaaaaagtt acgccgcgcc ccttccagtt gatgcatttg cgtgacatca
    29041 cgcgccacca tcagcaactg tttgtgggta taaggcatga cgcgaatttc cagatgccgc
    29101 ccggtgttga gcaccagatt gagcgggcga gaaaaatcac gcgttttcag atattgcgta
    29161 aactccgggt aacgcagtag gttaaggatg ttctgcccgt tatcttccgg ccagcgcaaa
    29221 ccaagaattt gttgcgccag accgttacac cagaaaatac cgccctcttc cgtggtcagc
    29281 accaccgcgt cgggcagcga ctccgcgccg ctacgaaagc gtttaatcag attgcccagt
    29341 tcacggcggc gttttttatt tcgcagctgc atctggtgta agccgtatag tagcggttcc
    29401 cagctaccac gccccggtgg cggggtcata ctgcgatcca cccacaacca ccatgaaagg
    29461 cgcaataaat tccagaaatg ccagataagc agtcctgtta ccgatgccag caaaaaccag
    29521 ggcaggtaac caaaaaatgc acccaggatg aaagccggga ggcaacaaag tagcagctcc
    29581 agcaccagcc ttttccacga cagccgttcc agcacgtaag atactccagt taagaaatca
    29641 taagccctgc tctgcgtccg atgagcaagg cgttaaaagc gggttgaaaa acgatatcct
    29701 gtaccgcgca cggtctgcac catgcggtca tgcccgccgg gctccagtgc tttacgcagg
    29761 cgacgaatgt ggacatcgac cgtgcggtct tccacataca cgttagttcc ccagacgtgg
    29821 tttaacagct gctcgcggct gtacacgcgc tcaggatgcg tcataaaaaa gtgcagcagt
    29881 ttaaattctg tcggccccat ctccagcggc tcttcgcccg ccatcactcg gtgagatgtc
    29941 gggtcgagac ttaatccctg catctcaatc acctcttcca ccgccattgg cgaaatacgg
    30001 cgcattaccg ctttgattcg cgccaccagc tccttcggcg aaaacggctt ggtgatatag
    30061 tcatccgcgc cggtttcaag gccgcgcacg cgatcttctt cttcccctct ggcggtcaac
    30121 atcaccactg gaatatcccg ggtcatcgac tcgcgcttga ggtgtttgat gaactggata
    30181 ccggagccgc caggtaacat ccagtcaagg agaattaaat ccggccaggg ttcattcagt
    30241 tgattcacag cactgtcata atcttccgct tcgaccggct gaaagccatt ttgttcgagc
    30301 acgaagcaga ccatttcgcg aattggagct tcatcttcta cgaccagaat acgtctcgcc
    30361 atgatttgcc ctgttgtaat aaataggttg cgatcattaa tgcgacgtca ttatgcgtca
    30421 gatttatgac agatttatga aaagctcgtc gcacatatct tcaggttatt gatttccgtg
    30481 gcgcagaaaa aagcaaatgg cacatctgtt tgggtataat cgcgaccatg ctttttcgcc
    30541 agggaaccgt tatgcgcatc cttcacacct cagactggca tctcggccag aacttctaca
    30601 gtaaaagccg cgaagctgaa catcaggctt ttcttgactg gctgctggag acagcacaaa
    30661 cccatcaggt ggatgcgatt attgttgctg gtgatgtttt cgataccggc tcgccgccca
    30721 gttacgcccg cacgttatac aaccgttttg ttgtcaattt acagcaaact ggctgtcatc
    30781 tggtggtact ggcaggaaac catgactcgg tcgccacgct gaatgaatcg cgcgatatca
    30841 tggcgttcct caatacaacc gtggtcgcca gcgccggaca tgcgccgcaa atcttgcctc
    30901 gtcgcgacgg gacgccaggc gcagtgctgt gccccattcc gtttttacgc ccgcgtgaca
    30961 ttatttccag ccaggcgggg cttaacggta ttgaaaaaca gcagcattta ctggcagcga
    31021 ttaccgatta ttaccaacaa cactatgccg atgcctgcaa actgcgcggc gatcagcctc
    31081 tgcccatcat cgccacggga catttaacga ccgtgggtgc cagtaaaagt gacgccgtgc
    31141 gtgacattta tattggcacg ctggacgcgt ttccggcaca aaactttcca ccagccgact
    31201 acatcgcgct cgggcatatt caccgcgcac agattattgg cggcatggaa catgttcgct
    31261 attgcggttc ccccattcca ctgagttttg atgaatgcgg taagagtaaa tatgtccatc
    31321 tggtgacatt ttcaaacggc aaattagaga gcgtggaaaa cctgaacgta ccggtaactc
    31381 aacccatggc ggtgctgaaa ggcgatctgg cgtcgattac cgcacagctg gaacagtggc
    31441 gcgatgtatc gcaggagcca cctgtctggc tggatatcga aatcactact gatgagtatc
    31501 tgcatgatat tcagcgcaaa atccaggcat tagccgaatc attgcctgtc gaagtattgc
    31561 tggtacgtcg gagtcgtgaa cagcgcgagc gtgtgttagc cagccaacag cgtgaaaccc
    31621 tcagcgaact cagcgtcgaa gaggtgttca atcgccgtct ggcactggaa gaactggatg
    31681 aatcgcagca gcaacgtctg cagcatcttt tcaccacgac gttgcatacc ctcgccggag
    31741 aacacgaagc atgaaaattc tcagcctgcg cctgaaaaac ctgaactcat taaaaggcga
    31801 atggaagatt gatttcaccc gcgagccgtt cgccagcaac gggctgtttg ccattaccgg
    31861 cccaaccggt gcggggaaaa ccaccctgct ggacgccatt tgtctggcgc tgtatcacga
    31921 aactccgcgt ctctctaacg tttcacaatc gcaaaatgat ctcatgaccc gcgataccgc
    31981 cgaatgtctg gcggaggtgg agtttgaagt gaaaggtgaa gcgtaccgtg cattctggag
    32041 ccagaatcgg gcgcgtaacc aacccgacgg taatttgcag gtgccacgcg tagagctggc
    32101 gcgctgcgcc gacggcaaaa ttctcgccga caaagtgaaa gataagctgg aactgacagc
    32161 gacgttaacc gggctggatt acgggcgctt cacccgttcg atgctgcttt cgcaggggca
    32221 atttgctgcc ttcctgaatg ccaaacccaa agaacgcgcg gaattgctcg aggagttaac
    32281 cggcactgaa atctacgggc aaatctcggc gatggttttt gagcagcaca aatcggcccg
    32341 cacagagctg gagaagctgc aagcgcaggc cagcggcgtc gcgttgctca cgccggaaca
    32401 agtgcaatcg ctgacagcga gtttgcaggt acttactgac gaagaaaaac agttacttac
    32461 cgcgcagcag caagaacaac aatcactaaa ctggttaacg cgtctggacg aattgcagca
    32521 agaagccagc cgccgtcagc aggccttgca acaggcgtta gccgaagaag aaaaagcgca
    32581 acctcaactg gcggcgctca gtctggcaca accggcacga aatcttcgtc cgcactggga
    32641 acgcatcgca gaacacagcg cggcgctggc gcatactcgc cagcagattg aagaagtaaa
    32701 tactcgctta cagagcacaa tggcgcttcg cgcgagcatt cgccaccacg cggcgaagca
    32761 gtcagcagaa ttacagcagc agcaacaaag cctgaatacc tggttacagg aacacgaccg
    32821 cttccgtcag tggaacaacg aactggcggg ttggcgtgcg cagttctccc aacaaaccag
    32881 cgatcgcgag catctgcggc aatggcagca acagttaacc catgctgagc aaaaacttaa
    32941 tgcgcttgcg gcgatcacgt tgacgttaac cgccgatgaa gttgctaccg ccctggcgca
    33001 acatgctgag caacgcccac tgcgtcagcg cctggtcgcg ctgcatgggc agattgttcc
    33061 ccaacaaaaa cgtctggcgc agttaatggt cactatccag aatggatctc tggaacagac
    33121 gcaacgtaat gtcgcactta acgaaatgcg ccagcgttat aaagaaaaga cgcagcaact
    33181 tgccgatgtg aaaaccattt gcgagcagga agcgcgcatc aaaacgctgg aagcccagcg
    33241 tgcacagtta caggcgggtc agccttgtcc actttgtggt tccaccagcc acccggcggt
    33301 caaggcgtat caggcgctgg agcctggtgt taatcagtct cgattactgg cgctggaaaa
    33361 cgaagttaaa aagctcggcg aagaaggtgc ggcgctgcgc gggcaactgg atgcattaac
    33421 gaagcagctt cagcgcgatg aaaacgaagc gcaaagcctc cgacaagatg agcaagcact
    33481 tactcaacaa tggcaagccg tcacggccag cctcaatatc accttgcagc cacaggacga
    33541 tattcaaccg tggctggatg cacaagatga gcacaaacgc cagctgcggt tactcagcca
    33601 acgacatgaa ttacaagggc agattgccgc gcataatcag caaattatcc agtatcaaca
    33661 gcaaattgaa caacgccagc agcagctctt aacggcattg gcgggttatg cactgacatt
    33721 gccacaggaa gatgaagaag agagctggtt ggcgacacgt cagcaagaag cgcagagctg
    33781 gcagcaacgc cagaacgaat taaccacgct gcaaaaccgt attcagcagc tgacgccgat
    33841 tctggaaacg ttgccgcaaa gtgatgatct cccgcacagc gaagaaactg tggcgctgga
    33901 taactggcgg caggttcatg aacaatgtct cgcattacac agccagcagc agacgttaca
    33961 gcaacaggat gttctggcgg cgcaaagtct gcaaaaagcc caggcgcagt ttgacaccgc
    34021 gctacaggcc agcgtctttg acgatcagca ggcgttcctt gcggcgctaa tggatgaaca
    34081 aacactaacg cagctggaac agctcaagca gaatctggaa aaccagcgcc gtcaggcgca
    34141 aacgctggtc actcagacag cagaaacgct ggcacagcat caacaacacc gacctgacgg
    34201 gttggctctc actgtgacgg tggagcagat tcagcaagag ttagcgcaaa ctcaccaaaa
    34261 gttgcgtgaa aacaccacga gtcaaggcga gattcgccag cagctgaagc aggatgcaga
    34321 taaccgtcag caacaacaaa ccttaatgca gcaaattgct caaatgacgc agcaggttga
    34381 ggactgggga tatctgaatt cgctaatagg ttccaaagag ggcgataaat tccgcaagtt
    34441 tgcccagggg ctgacgctgg ataatttagt ccatctcgct aatcagcaac ttacccggct
    34501 gcacgggcgc tatctgttac agcgcaaagc cagcgaggcg ctggaagtcg aggttgttga
    34561 tacctggcag gcagatgcgg tacgcgatac ccgtaccctt tccggcggcg aaagtttcct
    34621 cgttagtctg gcgctggcgc tggcgctttc ggatctggtc agccataaaa cacgtattga
    34681 ctcgctgttc cttgatgaag gttttggcac gctggatagc gaaacgctgg ataccgccct
    34741 tgatgcgctg gatgccctga acgccagtgg caaaaccatc ggtgtgatta gccacgtaga
    34801 agcgatgaaa gagcgtattc cggtgcagat caaagtgaaa aagatcaacg gcctgggcta
    34861 cagcaaactg gaaagtacgt ttgcagtgaa ataactattc agcaggataa tgaatacaga
    34921 ggggcgaatt atctcttggc cttgctggtc gttatcctgc aagctatcac tttattggct
    34981 acggtgattg gtagccgttc tggtggttgt gatggtggta tgaaaaaagt cattttatct
    35041 ttggctctgg gcacgtttgg tttggggatg gccgaatttg gcattatggg cgtgctcacg
    35101 gagctggcgc ataacgtagg aatttcgatt cctgctgccg ggcatatgat ctcgtattat
    35161 gcactgggag tggtggtcgg tgcgccaatc atcgcactct tttccagccg ctactcactc
    35221 aaacatatct tgttgtttct ggtggcgttg tgcgtcattg gcaacgccat gttcacgctc
    35281 tcttcgtctt acctgatgct cgccattggt cggctggtat ccggctttcc gcatggcgca
    35341 ttttttggcg tcggcgcgat cgtgttatca aaaattatca aacccggaaa agtcaccgcc
    35401 gccgtggcgg ggatggtttc cgggatgaca gtcgccaatt tgctgggcat tccgctggga
    35461 acgtatttaa gtcaggaatt tagctggcgt tacacctttt tattgatcgc tgtttttaat
    35521 attgcggtga tggcatcggt ctatttttgg gtgccggata ttcgcgacga ggcgaaagga
    35581 aagctgcgcg aacaatttca ctttttgcgc agcccggccc cgtggttaat tttcgccgcc
    35641 accatgtttg gcaacgcagg tgtgtttgcc tggttcagct acgtaaagcc atacatgatg
    35701 tttatttccg gtttttcgga aacggcgatg acctttatta tgatgttagt tgggctaggg
    35761 atggtgctgg gaaatatgct aagtggcagg atttcaggac gttattcacc actgcgcatt
    35821 gcagcagtga ctgactttat aattgtactg gcactgctga tgttcttttt ctgcggcggc
    35881 atgaaaacaa cgtcgcttat ttttgctttt atttgttgcg cgggattatt tgccctttca
    35941 gcaccgctac aaatattgtt actacaaaac gccaaaggcg gagagttatt aggtgccgca
    36001 ggtgggcaaa tagcgtttaa cctcggtagc gccgtcggcg catattgcgg tggtatgatg
    36061 ctgacgctgg ggctggcata taattacgtg gcgctgcctg ccgccctgct ttcgtttgct
    36121 gcgatgtcgt cgttgctgct gtatggtcgc tataagcgcc agcaagcggc ggatactccg
    36181 gtgcttgctg gcgaaaccac tggggtaggt tatagtctcg gtgttcatta cttattgccg
    36241 gatgcggcgt gaacgcctta tccgccctac gcggttctgg cacattttgc aggcctgata
    36301 agacgcggca agcgtcgcat caggcatgat gcgccaattg cctacgtttt ttactcttgt
    36361 ggccataacc acgcagcgcc gcgtacgccg ctggaatcac cgtgcttcgc cttacgcacc
    36421 ggcgtttcac attcgccgcc gaagacaaat tgtttaatca actgcggaac cgtttgatat
    36481 aaacggtcta cattgctcat cccccccccc aggacaatca catccggatc gagaatattc
    36541 acgacatgtg ccagcgattt tgccagccgc agctcgtagc gacgcaatgc cagttccgct
    36601 accggatcgc tttcttcaac caggcggata atttcactgc ctttcagcgc atgtccgctc
    36661 aaacgacgat aatccatcgc gaatcccgtg cccgaaataa aggtttcaat acaaccttgt
    36721 ttaccgcaat aacaagggac ttcctcgcga taacgcagtt cgtcttcgtc catccacggt
    36781 agcggattgt gtccccactc acctgccgtg ccattgccgc tgatatgcgc ccgcccattg
    36841 aatgccacgc ccgcgccgca tcccgtgccg ataatcacgg caaataccgt ctgcgctccc
    36901 gctgccgcgc catctactgc ttctgaaacc gccagacagt tagcgtcatt tgccagccgc
    36961 acttcccgct gcaacctcgc gcttaagtct ttatcgaatg gctgaccgtt gagccaggtt
    37021 gaattggcat tcttcaccac accggtgtaa ggcgaaattg agccaggaat gcccatacct
    37081 accgttccgc gctgccccgt cgcctgctcc gccatatcaa ccaacgtggc gatcgtttca
    37141 atagtctgcc ggtaatcatc acgcggcgtg ggcagacgat ggcggtacaa ctgctcccct
    37201 gcatcgccca gtgcaatcac ttcagttttg gtgccgccta aatcgatacc tatacgcacg
    37261 gtactctcct tatttttttc aatatcaata gcgtagagac ggacaaccgg attggcaatg
    37321 caaggccgcc gacaattcgt tatcatgccc gctaaattta acaacaaggc cgtggaaatt
    37381 atcatgctgt ggttcaaaaa tttaatggtt taccgtctta gccgcgagat ttcgctgcgt
    37441 gcagaagaga tggaaaaaca gctagcctcg atggcattta ccccatgcgg cagccaggac
    37501 atggcgaaga tgggctgggt tcctccgatg ggatcgcaca gcgatgcgtt aacgcacgtt
    37561 gccaatggtc aaattgttat ctgcgcgcgc aaagaagaaa aaatcctccc gtctccggtg
    37621 attaagcagg cgctggaagc gaaaatcgcc aaactggaag cggaacaggc gcgtaagctg
    37681 aagaaaaccg aaaaagattc gctgaaagac gaagtgctgc actctctgtt gccgcgtgct
    37741 ttcagccgtt ttagccagac aatgatgtgg atcgacacgg ttaacggttt gattatggtg
    37801 gactgcgcca gtgccaaaaa agcggaagat acgctggcac tgctgcgtaa aagcctgggg
    37861 tcgttacctg tggtaccatt gagcatggaa aacccgattg aactgacgct gaccgaatgg
    37921 gttcgctccg gtagcgcggc acagggcttc cagctgcttg atgaagccga gctgaaatcg
    37981 ttgctggaag atggcggcgt gatccgcgcg aagaaacaag atctgaccag cgaagagatc
    38041 accaatcaca tcgaagccgg aaaagtggtg actaaactgg cgctcgactg gcagcagcgc
    38101 attcagtttg tgatgtgcga cgatggttcg ctcaagcgtc tgaagttttg cgacgagctg
    38161 cgcgatcaaa acgaagatat cgaccgtgaa gatttcgccc agcgttttga tgccgatttc
    38221 atcctgatga ctggtgaact ggcagcgtta attcaaaacc tgattgaagg attaggtggc
    38281 gaagcacaac gttaattgct gattttcctt taatgccgga tgcgacgcct gccgcgtctt
    38341 atccggcgta cgaagccaca ccagggatat aattattcgc tacggcggac aataattttt
    38401 agcgcagcaa tattatgcgt tttatgctgt aacttgctcc atggacgttg tgtcattgtt
    38461 tttcctcaag ccagtgacgc gcttcactgc gaattttccg cattgccccg gttttcacta
    38521 aatcccgtaa cagcgaaaga tcgggttgtt cgacaaataa gagtaatgat ggatcctctt
    38581 ttaaccacgt cgttttcaca tcggcagcga gctgtggatt attcatagct agcgaccgat
    38641 gccgagactc ggtcaatgtc gttaacaacg acgccggggt atgtgcgttg cgtaatgccg
    38701 tttggcgcaa atgatcattg cgactttgca gcaatgcacg ccaccattca tcatctgatt
    38761 tatcttttat cgtagccagt tccgcaacaa tatctggaga tcttcactga tatttatatc
    38821 aaccttgatg aattatgaat atatcggaaa ttgaaaaaat cgcagcaaag gaaatattat
    38881 tatgggttaa agagaggata tttcagaaaa atgccctccc gttcaagggg aaggcgagga
    38941 attacagata gcggcacaga taagaggtgg gttcggcaac ttgcagatga aactcactgt
    39001 gaccgggaac attaaacacc gaaccggctt catacacctg ccagtcggtc gcatcaggca
    39061 gtaacacatt cagcgcgcca ctgattaccg tcatctcttc cggctcagcg gtgctgaagg
    39121 tgtattcgcc ttcaaccata acacccacgc tggcgcgacc agtgctgctg ctggaaaagc
    39181 cgattgattt cactttgccg gaaaagtact cattactttg aagcataaac tggccctgtc
    39241 tggtagttga acatctactt cactataggg gccagaggcg ctggctgtca cgcaaaatta
    39301 caccagtaat tccgcagcca gccgtgcaat caatacgtta gacagcaaga caggaacatc
    39361 gagctgtttt tgcagtaaat cgcgatgacg ttggtgaaat cctaaacaat ccagcatgat
    39421 gacatcagcc ccttttgcca gtaattcttt ccctgcatca atgatttttt gttctgaatc
    39481 atgaatgggg ttacccaatg aaaataccgg cgatttctgc aaaatttgcc atttttgcgc
    39541 ctgaacgggc agcatctcct caaccggaac gataaccccc acctgatgat cttcaacaat
    39601 agaggaaacc agtggaggca atattcgcga cggctcaaga aagatcgtat tacgcgcagt
    39661 catactacta atgtttgctg tactcattaa taaaatgacg tcataaccct gattatcgag
    39721 cacttcaacc acaccttgca ggtctcgctc cactttacga cgcgaaacat gggccagctg
    39781 gttgtcattt aataatgtga gaatggtgtc ttcgcctgct tctggcgcgt actccgccat
    39841 cacttcttca cgacttaact tccccagcag gctatgatgg gaaatattat cttcgtcaat
    39901 gtattccgtc aggagcggca aaacctcctg cataggtaca atgccgatgg tcaggatcgc
    39961 caacgacgca ctcattgttc atccacctta cttttctttc gtcgttaatt accgggcaag
    40021 tgtgaagcac cactgctgac acttacttgt gctacaaatg acaaaaagcg tagcagcaga
    40081 cgtgcacggc ataatgtaaa gattccaaat gattccagta atggattgtt attgtttaat
    40141 attctaatta ttagaaaaac atgaattatg aaaaatgtga cgcagatccc ttgtagtggc
    40201 actcagaatc ccttccgagc agtctgatgc ggtcactctt tgtcagggtc ctcatagcgt
    40261 tttttcgcat ccatcgcttc ctgagcggtc ggatgttcac tgatcaacga gtctggttta
    40321 ggatgatcgg ctctgagttg gtaccaggtt accgtctgtc ctggctttcc tttttcaatc
    40381 gtcactatat atgcttcacg aggataaggc ggtttcgttg gcatcgttct tccttatttc
    40441 acggaatgaa cgttaagtat aggcgctcta aaatcaacaa ttgatcgtct gtgccagggc
    40501 gctacgaatt tcagaaatca cctggctggg ttcgtttgtt gcgtcgatga taatatgcgc
    40561 aacttcgcga tatagcgcat cgcgttcttc cagcacttcc tgaacttctt cgctcagcgg
    40621 ttttcccgtt aaggttggcc gtaaatcttc ttccggtgca gcttgcagtc ggttaaccag
    40681 gactgatact ggcgcacaca aataaaccac gatcccgtta ttttgcatga agtgacgatt
    40741 aaattccgtc agaataatgc cgccgcctgt agcgataacg gtggatggcg cagttaccgc
    40801 ttccagcgcc gccgtttctc tggcgcgaaa tcccgcccac tcttcccttt cgacgatctc
    40861 cgcgaccgtc atattgagct gtgattgcaa ccactgatcg gtatcgacaa accgacggtt
    40921 aagcgaatcg gcaagggcca ttccgaccgt tgttttacca cagccccgag gcccgatcag
    40981 aaaaagaggt tgtgtcatcg tgggttttcc ccaataggtc gcaatgcggc gaaagccggt
    41041 gtcatgagaa tagcgatcat tccatcaaac tagtacaatt tcgattgtaa agaaaaaatt
    41101 ccacttaaag tgaaaatctc aatacatccc ttactatacc aataaatatt caagaatgaa
    41161 gtgtaaataa taaattacat ttagccacga ctacgttgca cttccagcca ccacttctcc
    41221 agctccgcgg caaaggcctg gcggtcacgt tgtgaaaggc tatctggtcc gccggtctgg
    41281 atcccactgg cacgtaaggt atccataaaa tcgcgcatcg tcaggcgctc acgaatggtc
    41341 gctggcgtgt aacgttcgcc gcgcggatta agcgccgctg cgcctttctc gatggcttca
    41401 gcagccaaag gtatatctgc ggtgatcacc aaatcgcccg cttcacactg ccggacaatt
    41461 tcgttatcgg caacgtcgaa acctgccgcg acgcgcagcg tacgaataaa tcgcgatggc
    41521 ggcacgcgta aactctggtt tgctaccagt accagcggca tctgcatacg ttccgccgcg
    41581 cgatacaaaa tctctttaat tacattggga cacgcgtcag catccaccca aattgtcata
    41641 aagtcatcct ttgttgggta atcctctatt gtgtcgcgct tttgccttcc ggcatagttc
    41701 tgtttatgct tctgccagcg attatcaaaa caatgaattt cacggcagga gtgaggcaat
    41761 ggaaaagaaa atcggtttta ttggctgcgg caatatggga aaagccattc tcggcggtct
    41821 gattgccagc ggtcaggtgc ttccagggca aatctgggta tacaccccct ccccgaataa
    41881 agtcgccgcc ctgcatgacc agttcggcat caacgccgca gaatcggcgc aagaagtggc
    41941 gcaaatcgcc gacatcattt ttgctgccgt taaacctggc atcatgatta aagtgcttag
    42001 cgaaatcacc tccagcctga ataaagactc tctggtcgtt tctattgctg caggtgtcac
    42061 gctcgaccag cttgcccgcg cgctgggcca tgaccggaaa attatccgcg ccatgccgaa
    42121 cactcccgcg ctggttaatg ccgggatgac ctccgtaacg ccaaacgcgc tggtaacccc
    42181 agaagatacc gctgatgtgc tgaatatttt ccgctgcttt ggcgaagcgg aagtaattgc
    42241 tgagccgatg atccacccgg tagtcggtgt gagcggttct tcgccagcct acgtatttat
    42301 gtttatcgaa gcgatggccg acgccgccgt gctgggcggg atgccacgcg cccaggcgta
    42361 taaatttgcc gctcaggcgg taatgggttc cgcaaaaatg gtgctggaaa cgggagaaca
    42421 tccgggggca ctgaaagata tggtctgctc accgggaggc accaccattg aagcggtacg
    42481 cgtactggaa gagaaaggct tccgtgccgc agtgatcgaa gcgatgacga agtgtatgga
    42541 aaaatcagaa aaactcagca aatcctgatg actttcgcct gacgtcaggc cgccacttcg
    42601 gtgcggttac gtccggcttt ctttgctttg taaagcgcca aatctgccga tttcaaccac
    42661 tcacgatagt gactcatttg tgggttcagc ggcgcaaccc ccacactaat ccgtaaagtt
    42721 acctgtggcg tattcggcaa gcgtaacgtg tttagccctt cacgcacccg taacatggcg
    42781 gtaatggcgc tctcagctgg cgtaccggac atgattactg caaactcatc gccgccaaac
    42841 cgaccaatca catcgctacc gcgcagggta atttgtaact gtcgggtaag cgccacaatc
    42901 gcttcatcgc ccacatcatg accccaggta tcgttgatgc tcttgaaatg gtcgatatcg
    42961 ataatcagta acgttgcatc gcgattatgc cgccgacagt tatcaaattc attgcgtaac
    43021 atagtttccc aatgacgtcg gttatacacg cccgtcatgc cgtcgcgggt actcatgacc
    43081 tgcaacctgc gtttatgttc cgccagtttg gttgccgtct ggtagctgac ccagccaaac
    43141 agcagaggat aaacgacaat aatgggaagg gagagccacc attccagcgg cgcactattg
    43201 aacgacacgg taatgcccgt aagctcgagg gtgacaaggc aggaaaccac catcaacacc
    43261 agacccgcga caaacagacg ggggccgcct gcccccatca aattcagaca cataatcatc
    43321 aacatagcgg tggaaggcag cacgtttacg cccattacgc ctacccacat tcccgctaat
    43381 actgcatcgg tttttaagtt gtaaatttcc cggctaagcg gatcgacggc cctgctcgct
    43441 atctgccagg ctaaatgcgg ccagacgaac gcccagccga ccaacactag ccaccaccag
    43501 cccggcggcg ggtgcgaaac cagcgttgaa gcaatcggta agaacatgcc agccaggcca
    43561 accgcacggg gtagtctgac gcgacgggcg aagcgcagcc cggaccgctg atgttcgttt
    43621 tgaggagtta aaggaggttc ctccccatgc gccgccgctt ttttgaaaaa gttttcatca
    43681 ttcattattt ttgggaacat tcagaaacaa ttttcccaaa ttatagagac ggggctaaag
    43741 gcagaagtat gaaatttcgg gtgagccact ttcgtagctc acccgttagc actatcaggt
    43801 atcaggcggc tttcttgagg caggcactca taaacttatt acgatcatca cctttcagag
    43861 attgttgcgt tgcttgatta ttacattcgc gcatcttttg ctgctgtggc gtcaaacttt
    43921 tttcaccagg cgcagacttg ctgttcttca ggcaatcact catgtaggtc ttacgagcat
    43981 cccctttcaa cgcctgcgcc gtcgcctgct gattacagga ggtcatacgc tgttgttgtg
    44041 gggttaacgt tctctcggca gcgccgactg tggttaaaaa aaccagaccg aaaagcaagg
    44101 taaccagtaa tgtaattttc atagcaccat ccctcttcat gttttaacca tgagcgtatg
    44161 cgcccgagat ttgccattaa gtctggttgc taacagcaaa aaaaccaccc ggcagcgaaa
    44221 attcactgcc gggcgcggtt ttatttcagc cccagggcgg ctttcatggt gtagaagaga
    44281 tcggtctggt cggtcagtcc aacgacattg gcggcatgcg ggccatacgc cgcaatacgc
    44341 aactgactgc cggtatgttc ttgtgaatcc tcttcggagt tcccgtagct catcaccatc
    44401 actgcgccat ctttggtatt tagcgcctgg gtgaggcccg gagctttggt atccggcgcg
    44461 acaatctggc tggcgtgggc gtgatcagcg gtgactatga ccagcgtgtt gccatccttt
    44521 ttagcgaatt ccagcgcccg ttgtacggct tcatcgagat cgaccgtctc gccaatttgc
    44581 ccacaaggat tcgcagcgtg atcctgttta tcgattgacg caccttcaac ttgcaggaaa
    44641 aatcctttct catttttact caacaattca atggctttgt cggtcatctg cgccagggtt
    44701 ggtacactgt cattacgttg cggattaggc gtacaggtga ctgcgggctt atcgatattg
    44761 ccgtggtacg ttgctttcgg tcctagccag cgcactggca tattgccgtc agcaaacagt
    44821 ccaagcagag gtttttgctg attcgcttcc gtcaccgcat ttagcgaggc ggcatcgctg
    44881 accaactgat aaccacgcgc ctgtgcctgt tcacgcagcg tttttccctg ccattcaccg
    44941 gcggttgccg tttcagcaaa ggtttttgcg ccaccgccaa gcgtaacgtc ggcacgagca
    45001 ttaagcagct gttcggtaat cgatcctttt ccgccttttt ccagagcgtt acccggacat
    45061 ttttcactgg tcgcgctcgg accgtagcat ttgcgcgaag tcacatgtgc caccagcgca
    45121 gcgggcgtgg catcctgcaa ctctgcggta gaaacgttac cggtcgccag acctgcggct
    45181 tttgccattt ccagaatcgt tgggtgatct ttttcgtgaa tatcgacgcc cagcgcgccg
    45241 ttataggttt tgacaccggt tgaccaggcg gttgctgatg cagccgaatc ggtgacgtag
    45301 tccggtttgc cggttttttt attcagcgca tagtgagtgt attgcccggt aagcggtaag
    45361 gcatcgatac ctttaaaaaa gccgcccgca ccttcggcat aattacgtgc ggctgtaatt
    45421 tccgaatccc ccatcccatc gccaatcagc aaaataatat tttttgcagg tttatcgcta
    45481 agagaatcac gcagagcggc agtctgatca cccgttaaac ggcgagcacc gccgggtgca
    45541 gtaatatcgc cctgagcagc ccggttttcc agaacaggca tttctggtgt ccgggctttt
    45601 gtcacagggg taaacagtaa cggtaagagt gccagtgcaa tagtgctttg tttcacttta
    45661 ttttctccat gtacaaatac attaaaaaat aaaaacaaag cgactataag tctcggccgt
    45721 gacaacttta tgacagctgt tgaaaagatt aactttttac tgacgaggat gcttcaataa
    45781 cttctttaca taattgcgca gcagctccgt atcgtcgtca ggaatgctgg catcaggctt
    45841 tacctcgtaa agagccccct ccacctgttc aatcaagcgc tgttggtcat tttgtgccat
    45901 attgcgaagc attgcagtga cgataatctc caaagcttct acctgcgcgc acagttcttt
    45961 cgactcttct tctttttggg caagctttaa taacaactca gcaatgagat ttttcatgtc
    46021 tgtatttcct tatccaacgt atggagaagt taacattatg tttcacaact tcatagtgtc
    46081 tggaagtatt atttttatga caaaggaaat actttgcgca aatgttcttt gtttgattac
    46141 cagcgaaacg tttctcatat ttaaataatt aaccacacaa agaacaggcc tttaattatc
    46201 aacctttatt ataaacaaaa gttatgaaat atattctctg cgtttactta caactaagag
    46261 aaaaaactca ccgcatggcc atttaagcca ggaataaatt agcttcccgt tcatcatttt
    46321 tgtgatctcg cgcacatctt tgtaataacg cactttcttc accattacgt tgcacgcttt
    46381 gtcagcagaa gattgcaaca ttctgtcaga aggccgcgaa tcccccgttt tgtcgtggta
    46441 atgtatgcac tttgtgttag acgggatagg tttttaagat ggaaaaactg cgggtaggaa
    46501 tcgtttttgg tggtaaatca gcggaacatg aagtgtctct gcaatcggca aaaaacattg
    46561 tcgatgccat tgataaaagt cgcttcgacg ttgtgctgct gggcattgat aaacaagggc
    46621 aatggcacgt cagcgatgcc agcaattatc tgctaaatgc agacgatcct gcccatattg
    46681 cgttgcgccc ttcggcgact agccttgcgc aggtgccaag taaacatgag catcagctta
    46741 tcgacgcgca aaacggtcag ccgttaccga cggtggatgt cattttcccg attgtccacg
    46801 gtacgctggg cgaagatggt tccttgcagg gaatgctgcg ggtcgccaat ttaccgtttg
    46861 taggttctga tgttctggct tcagcagcct gtatggataa agatgttacc aaacgtctgc
    46921 tgcgcgatgc cgggctgaac attgcgccat ttattaccct gacgcgcgcc aatcgtcaca
    46981 acattagttt tgccgaagtg gagtctaaac tgaggttacc actgtttgta aaaccggcta
    47041 atcagggctc ttctgttggt gtcagcaaag taaccagtga agaacagtac gcaattgccg
    47101 tcgatctggc gttcgaattc gatcataaag tgatcgttga gcaagggatc aaaggtcgtg
    47161 agatcgaatg cgcagttctg ggcaacgaca acccgcaagc cagcacctgt ggcgagatcg
    47221 tactcaccag cgacttctat gcctacgaca ccaagtacat tgacgaagat ggcgcgaaag
    47281 tggtagttcc ggcagccatt gcgccagaaa tcaacgataa gatccgggcg attgccgttc
    47341 aggcttatca aacgttggga tgcgcaggca tggcgcgtgt agacgtgttt ttaaccccag
    47401 agaacgaagt ggtgatcaac gagatcaaca cactgcctgg cttcaccaac atcagtatgt
    47461 atccgaagct gtggcaagcc agcggtctgg gttacaccga tctgatcaca cgtttgattg
    47521 agctggcgct ggagcgtcac gctgcggata acgcattgaa aaccacaatg taatatttta
    47581 acgcccgata atattcttat tgggcgtttt cagtttcttc atcgcgacga cgaataatca
    47641 accccgccag ccagaaacta atcacccacg tcaccagacc gacggcatag gtctgccaac
    47701 cttttgcttc aaatcccagt aaccccaccg cgccattaag aatgaatata aggccaatgg
    47761 cgaacgcata gtagtgccag tcacggcgga tttttacagg cagattcatg gcagctccgt
    47821 taacgaaaaa caacatcctt gcatattctg taacaaccgt ctgtggtgta gacaacattt
    47881 tcgtaattgt taataaattt aacttaaggt tgccattttg tgactcacaa cgaagattca
    47941 cgcttcggga atattcccaa catcaattta ccatgattct gatattgaca atctaaatga
    48001 cctgtcagac ttgccataag ccgctggtat cacaccagaa gagaagcaga tgacttccgg
    48061 aggtttttat ggctgatttc accctgtcaa aatcgctgtt tagcggaaaa tatcgcaatg
    48121 cctcttcaac gcctggcaac attgcctatg cgttgtttgt gctgttttgc ttttgggctg
    48181 gggcgcaatt gctgaacctg ttagtgcatg cgcccggcgt ctatgagcgt ttaatgcagg
    48241 tccaggaaac aggtcgccca cgggtggaaa ttggtttagg tgtcggcacc attttcgggc
    48301 tgatcccgtt tttagtaggc tgcctcattt ttgcagtggt ggcgctatgg ctgcactggc
    48361 gacatcgccg ccagtaagat ttacgttgcc agatacggcc taaaacgcct tatctggcat
    48421 gacattcctg tttgatcact gtttcataca acgcgcccgc cgttcgtcta cgcgcttcgc
    48481 aaaccaggcc gtagtcaggt tgcgggtgat tttcgggctt tccagttgaa tgccaggcaa
    48541 catttcgcgg ggtagtgatt tacccgtttt cgcttcggca agttgataaa ctttcttgta
    48601 cagcgccgtc tcctcaaaag agaagctgtc acctttctct aactgacggc gaatttcgct
    48661 gtcgctcatc cccagttttc ccgccagttt gcgcgttgcc agttcggttt tcccgggttc
    48721 tttactgtcg taacgaatta aatcaccgtc cagtgccagc ttcacgccgc tggccttact
    48781 gaccgcgttc tgaaacgcgg cattacggct ggcgtaccag ccagcgttaa aatcagcaaa
    48841 gcggtatatc ggtgcgctat agctggcggg ataattcagt aaatggtaag taccaaacca
    48901 caacccgccg cggcgactga agacttcctg acgaactgta ccgtccattt tccacggata
    48961 ccctttggta tgctgttcgg caaaagcaat gctgacctgc atcggcccac cggtgcgcac
    49021 cggattaagc gaaccaaaca gcgtctgccc cattggtacc atgctgatca gatcgtcaaa
    49081 aatcgcgctc aattgctttt ctgtacgcac cgaatctaac cgttcgctat aacttttgcc
    49141 gtttggcgat ttgattttta gcgcggtatg aaccagaaaa gcaggaatgt gcatccgttc
    49201 agcacgacgg tcaatctctt gccaggcgat cttgcttaag cccggaacgg ccggatctgc
    49261 ctgataattt gactcctgct gcgccaccgc cagcaccgag cagacgtttt ccagcgtcgg
    49321 tgccagcccc tgactttcaa aggtggtggc gagatctttc gcccaggcat cgcggtcttt
    49381 cacgctcgca ggcatcttct gccgcacgac gctcgctaca tctatcgctt tttcgccctt
    49441 tttcaacggt tgcggagcct gactactaca ccccgctaaa accagaaccg ccaacaatga
    49501 cagcgaagat agatgattga cgcgcgacat tacttctcct ttttagctca aggtatgggt
    49561 tacttcctga attttgtcac catccagctc atgttcaaag ctgcgcagac gtttgtagat
    49621 agacatcaac tcaaccagtg tggtccatga gttaatcagg tactggaaag caccgcgaac
    49681 ctgaccaaaa acgttggtaa tctgcgtcat caggccgagc gtaatcgtac cggcaacaat
    49741 tgacggaaac agcaagaaca aaccgaaaac gttatcgacc tgcaaataga gaatgcgggc
    49801 gatgttgaaa tacatatagt gaaaatagag gcgaaaatag tttttccgta cggcgctaaa
    49861 cagctcgcgt accgtaggcg gcgtcgcgcg cgtggcatcg tcttcaccat aaaccagctc
    49921 tttacggtag gcggcctcta ctcgctggtt tttaaactcc agccccggca gtttgatccc
    49981 taccactgcc agcaatccgg tccccatcag cgaccagacg atagcggcaa tcaccagacc
    50041 atacggaatg tgcccgataa tcggcagctc cggcacatgc gcggagagcg ttaccagcac
    50101 cggcaggaag gcgaccaacg tcatgatggc gttgataaaa ctgacgccca tattctccag
    50161 cgttgaagca aaacgcatgg tgtcttcctg cacacgctgt gcggcacctt cgatatgacg
    50221 cagttgttgc cagttcgcca tgtaatattc gttcatcgcc gtacgccagc ggaacacata
    50281 gtgactgaca aagaagttgt tcagtacact gatcaccacc gcgatcagcg caatccccag
    50341 aaagacgccc acttcgcggt aaaattgttc gatagtgact ttatgcggcg aacttagcgc
    50401 ggtttgaatc agatcataga acggtgcata ccaggcgttg acggcgactc cgacttccac
    50461 caaaaaccag gtgacgaaga tgatcagtgc agtaccgagt attgaccagt attgccaacg
    50521 gtgcgggctg tagataaacc agaaaaatgc aaaaagtcct acgcaaacaa tgtagtaagc
    50581 gtaaaaaatc aggaaatcca acgaccagaa acgcgcggcg ctaatcggga tctgcccgga
    50641 agcgccggtg atacgcgcca cccagtctcc cccaccggct tgccagaaga taacggcaat
    50701 caatgcccaa acaaaggccg agagaaaaaa cgctcccggc tttgggaaaa aagacttaaa
    50761 catatgcact cctgctaact tcttatcgtt ttaacaactg ctgtgtatta accgcatgac
    50821 cactacaaag cgtcagccaa atgaaaccgc ccattgtgac ccatagcaag gcgcttagtt
    50881 cgccagcctg accataagaa ttgtttcgac ggatttcaca aaccaaagat tgtttacata
    50941 agcggattaa cacgcgcagg atcacaaatg caggcattgg tgagcaggaa aaagatcgtg
    51001 tttacgcgcc gttacgtttt taacactatt attgcactaa ttcgcccttt gcaatccatc
    51061 aatgagtagt ataaatacgc tcagttacct tcattcaatc tatggacacc accgttgaaa
    51121 cgtagtctgc ttttttctgc cgtgctgtgt gcggcgtcat tgacctccgt ccatgcggcg
    51181 cagccgatca ctgaaccgga gtttgcctct gatattgtcg atcgttatgc cgatcatatt
    51241 ttttacggca gcggtgccac ggggatggcg ctggttgtta tcgacggtaa ccagcgcgtc
    51301 tttcgcagtt atggcgaaac gcgacctggt aataacgttc gcccgcagct ggattcggtc
    51361 gtgcgtattg cttccctcac caagctaatg accagtgaaa tgctggtgaa attgctcgac
    51421 caggggaccg tgaagttaaa cgatccgcta agtaaatatg ctccgccagg cgcacgcgtg
    51481 ccaacctaca atgggacgcc cattacccta gtgaatctgg caacccatac cagcgccctg
    51541 ccccgtgaac agcccggtgg cgcggcacat cgtccggtgt ttgtctggcc aacgcgcgag
    51601 caacgctgga aatacctttc tacggcgaag ctgaaagccg cgccaggcag tcaggcggcg
    51661 tactctaacc ttgcgttcga cctgctggca gatgcactgg cgaatgcgtc cggcaagcct
    51721 tatacccagt tgtttgaaga gcagattacc cgtccattgg ggatgaaaga caccacctac
    51781 accccctcac cggatcagtg ccgccgttta atggttgctg agcgcggtgc cagtccgtgc
    51841 aataacacgc tggcggcaat tggcagcggc ggcgtctatt ccacgcctgg cgatatgatg
    51901 cgctggatgc agcagtattt atcatctgat ttttatcagc gcagtaacca ggcagatcgc
    51961 atgcagacgt tgatttatca gcgcgcgcag tttaccaaag tgattggcat ggatgtcccc
    52021 ggcaaagcgg atgcgcttgg tttaggctgg gtatatatgg ccccgaaaga gggtcgtccg
    52081 gggattattc agaagacagg cggtggtggc ggtttcatta cctatatggc gatgatcccg
    52141 cagaagaata ttggcgcgtt tgtggtggtc actcgttcgc cgttgacgcg ctttaaaaat
    52201 atgagcgatg gcatcaatga tctggtgacc gagctaagcg ggaataaacc gttggttatc
    52261 cctgcatcct gattaatact ctgaaggcaa acggttgata gcgaccagtt tgcctttatt
    52321 catttcgata tagccgcctt tacgcaaagc agcgagaact tctgcgacga cagaacgcga
    52381 tatgcgtgta cgttgatgga tataattcat cacaccaata cgtgatcgca attcttcatt
    52441 ccagtcaatc attgataata atgttgcgcg gatttgttcg taggaattat gcccaatgag
    52501 ctgcacgtcg cgtaattcca gaattctatt ttgccaggct aaccagtaaa aagcgtctcg
    52561 ccagagttga ttttgttcaa taagcgtaat ggtttgtttg gctggtagat gatatcccgt
    52621 acaatttcct tctgatatta atttgtatgg tatatcgttt ttcattaaac catcagccag
    52681 ccccataata taagaagcct gggtaatacc gataagtacg ttttcttctc tacgcagaga
    52741 gataacgccc tctaaaataa agaaagtatc ttcgctattg acatcactgg aaaatataac
    52801 ttgcttttca ttattaaact cgaagcgcgt accgtatctg gacaaacatt tatcgagctt
    52861 accaaattcc tgaagaggtt taactacaga taacatttgc gcgtcctttg cagtaatgcc
    52921 cgtcaaatcc ttgacgggca ttatttagat taaattacca gaatttcttc ggagtgaaga
    52981 atattaccaa gtatatttaa cacccacgtt cgcggaccag tcttgatcta cgtcaccacc
    53041 accgaggtag ttagcatcgg tataggcgct gaagttcttg gtgaagctga actgagtacc
    53101 cagaccaaca cgtaccgcag acccttcagt accgttatcg atggaatcac cgttcacatc
    53161 gttatcgttg tttgagtcgt cgtagacgta agccagtttg aagtacggag tcagagcctg
    53221 atcttcgctg taggtgaagg tataacctgc atctacaccc agttcataac gcatgctgtc
    53281 gtaagactga ccgtcaactt tcatgtcgtt gctcagctgg tagtcatcac cagactggaa
    53341 cagaccagaa acgctgccgt aaggagtctc gtaaccagca tcacccagtt tgaagtcgta
    53401 accggctttc aaaccgaagc cccacgcgtc agagttggtg ctaccgtcaa cgtaagtacc
    53461 gttgctcatg gttgcagaca ggtcgttgtt gaagtgagag tagctcaagc taccatcaac
    53521 aaagacgttg ttcgcgaagt gagcagaaga gtagatgtag gcagtctggc tgtcttgatc
    53581 cacctgacca gaacggtcat tcatgtcacc tttagcgaag cctgcagccg caccgacgat
    53641 ccacttagcg ttgttaccgt caattttggt atcaacaccg accatgatgc cgttaacatc
    53701 ctgatcatag ttgatggtgc cgttgtcgcc gttgaagtta ccaccgaagt agcttaccca
    53761 tgcgccgccg ttatcagcca ggccatgacg agagttggtc agacgagtac caacggtgtc
    53821 ttgttccagg ttccagatat tggtgttcgc agacgggatg ctcagcgcca tgttagcgta
    53881 gtcggtcagc tccatctgtt gcagaacaac ggtgttaccg cgctgttcag cctgataggt
    53941 gtatgcaccc aggtcagctt tgttagcagc agagaaggtc gcgttggtgt tagcgtcgtt
    54001 tacccgaata agttctttat ctttgtaatc agcgatagtg ccagcgccag ttgcgttgtc
    54061 gatacgaact ttgtagttac cggttgcagc aacaacgtta tcaacagagc tgttatccag
    54121 ttcagtaccg ttgtctacgt cgccgttacc attgatagtc aggtgaccat cagagttcat
    54181 agcaacaata ccgtaaccgt agttagactt ggaagtatcc cacgtacggt cgttcaccag
    54241 atcagcgttc agaacgtaat cgctgctgtt gatgtcgaac acaccagaaa ttacgttgcc
    54301 attatggtca gcaatgttgc cgctggtcag ttccagttta tcagtacgga aagcttcagt
    54361 atcgaactga tcaacattca catccagcac accaccgtta gtcacagtga tagtattggt
    54421 atacagatta gaataattat tccaaccggt agattcggtt aaattaacgg tactgtagct
    54481 atcaacagtc aggtggtctg tagcaaccac gccatttgca ccaatattca gtgaagaacc
    54541 gttggttaaa ccaatggtat ctgataccag agaggaatca gtaacattta cctgagagcc
    54601 attattta
//
LOCUS       DADMIB010000009        47222 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.009, whole genome shotgun sequence.
ACCESSION   DADMIB010000009 DADMIB010000000
VERSION     DADMIB010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 47222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47222
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.009"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            27..764
                     /locus_tag="JNZ89_000567"
     CDS             27..764
                     /locus_tag="JNZ89_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY8934532.1"
                     /translation="MPARHLYFIMTNTWNRLALLIFAVLSLLVAGELRAGVVVGGTRF
                     IFPADRESISILLTNTSQESWLINSKINRPTRWAGGKASTVPAPLLAAPPLILLKPGT
                     TGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPG
                     DPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQ
                     AIAPCHVAWRAINDYDGLSAKKEQNLP"
     gene            875..1885
                     /gene="pyrD"
                     /locus_tag="JNZ89_000568"
     CDS             875..1885
                     /gene="pyrD"
                     /locus_tag="JNZ89_000568"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HAY8934533.1"
                     /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA
                     KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR
                     LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME
                     KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI
                     APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST
                     EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT
                     HI"
     gene            2059..2601
                     /gene="zapC"
                     /locus_tag="JNZ89_000569"
     CDS             2059..2601
                     /gene="zapC"
                     /locus_tag="JNZ89_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapC"
                     /protein_id="HAY8934534.1"
                     /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF
                     SPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNVLVAIRYLKPQMPKSWHFVSHG
                     EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
                     MNDRLKPQVNVDSFSLEQAV"
     gene            complement(2598..3707)
                     /gene="ycbX"
                     /locus_tag="JNZ89_000570"
     CDS             complement(2598..3707)
                     /gene="ycbX"
                     /locus_tag="JNZ89_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein YcbX"
                     /protein_id="HAY8934535.1"
                     /translation="MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT
                     FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA
                     PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
                     RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ
                     KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA
                     ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ
                     ILEGEVSPLKKSAMGDDGTILCCSCVPKTALKLAR"
     gene            3951..6059
                     /gene="rlmKL"
                     /locus_tag="JNZ89_000571"
     CDS             3951..6059
                     /gene="rlmKL"
                     /locus_tag="JNZ89_000571"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HAY8934536.1"
                     /translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV
                     YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI
                     RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH
                     LRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL
                     HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR
                     LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK
                     NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA
                     EDYANRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYSDWVVVQEYAPPKTI
                     DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA
                     HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGALSTTT
                     VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR
                     MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT
                     LSQDFARNRQIHNCWLITAA"
     gene            6071..7978
                     /locus_tag="JNZ89_000572"
     CDS             6071..7978
                     /locus_tag="JNZ89_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8934537.1"
                     /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST
                     LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH
                     DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG
                     WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
                     MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQL
                     VKDFSAQVLRGDKIVLIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
                     ELDPDKTVMDNIAEGKQEVMVNGKPRHVLSYLQDFLFHPKRAMTPVRALSGGERNRLL
                     LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW
                     IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKL
                     QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER
                     WEYLEALKNGG"
     gene            8108..9361
                     /gene="pqiA"
                     /locus_tag="JNZ89_000573"
     CDS             8108..9361
                     /gene="pqiA"
                     /locus_tag="JNZ89_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiA"
                     /protein_id="HAY8934538.1"
                     /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW
                     DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF
                     FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV
                     KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR
                     QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM
                     VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
                     KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM
                     TMFSAMTFDPRLSWDRQPESEHEES"
     gene            9366..11006
                     /gene="pqiB"
                     /locus_tag="JNZ89_000574"
     CDS             9366..11006
                     /gene="pqiB"
                     /locus_tag="JNZ89_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706874.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HAY8934539.1"
                     /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE
                     VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT
                     VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV
                     ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTSNVRF
                     WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS
                     IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR
                     IPVLIRIEPERLKMQLGENTDVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT
                     PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT
                     MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL
                     DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
     gene            11003..11566
                     /gene="pqiC"
                     /locus_tag="JNZ89_000575"
     CDS             11003..11566
                     /gene="pqiC"
                     /locus_tag="JNZ89_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HAY8934540.1"
                     /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR
                     LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW
                     VVASQPLGSVQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG
                     YDEMVKVLAGVWSQEAASIAQEIKRLP"
     gene            11822..11989
                     /gene="rmf"
                     /locus_tag="JNZ89_000576"
     CDS             11822..11989
                     /gene="rmf"
                     /locus_tag="JNZ89_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome modulation factor"
                     /protein_id="HAY8934541.1"
                     /translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGW
                     REAMADRVVMA"
     gene            complement(12059..12577)
                     /gene="fabA"
                     /locus_tag="JNZ89_000577"
     CDS             complement(12059..12577)
                     /gene="fabA"
                     /locus_tag="JNZ89_000577"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014915875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HAY8934542.1"
                     /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
                     ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
                     KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD
                     LKVGLFQDTSAF"
     gene            complement(12646..14406)
                     /locus_tag="JNZ89_000578"
     CDS             complement(12646..14406)
                     /locus_tag="JNZ89_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon protease family protein"
                     /protein_id="HAY8934543.1"
                     /translation="MTITKLAWRDLVPDTDSYQEIFAQPNLIDENDPLFSDTQPRLQF
                     ALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTLQSDAGQLVGDHYEVSGHSIRLR
                     HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
                     LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
                     MEPELSEQAIYSEFEDTLQIVDAESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAA
                     RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE
                     ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE
                     LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
                     LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR
                     HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ
                     QEGRHRFPWPLRWLNWFIPN"
     gene            14592..15044
                     /gene="matP"
                     /locus_tag="JNZ89_000579"
     CDS             14592..15044
                     /gene="matP"
                     /locus_tag="JNZ89_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HAY8934544.1"
                     /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL
                     LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ
                     RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKLDLQALLGKE"
     gene            complement(15120..16160)
                     /gene="ompA"
                     /locus_tag="JNZ89_000580"
     CDS             complement(15120..16160)
                     /gene="ompA"
                     /locus_tag="JNZ89_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HAY8934545.1"
                     /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF
                     INNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTA
                     KLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRL
                     EYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLK
                     SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSER
                     RAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV
                     KGIKDVVTQPQA"
     gene            complement(16517..17026)
                     /gene="sulA"
                     /locus_tag="JNZ89_000581"
     CDS             complement(16517..17026)
                     /gene="sulA"
                     /locus_tag="JNZ89_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor SulA"
                     /protein_id="HAY8934546.1"
                     /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM
                     MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES
                     MVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG
                     LKIHSNLYH"
     gene            17245..17873
                     /gene="sxy"
                     /locus_tag="JNZ89_000582"
                     /pseudo
     CDS             17245..17873
                     /gene="sxy"
                     /locus_tag="JNZ89_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415479.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CRP-S regulon transcriptional coactivator Sxy"
     gene            complement(17836..19998)
                     /gene="yccS"
                     /locus_tag="JNZ89_000583"
     CDS             complement(17836..19998)
                     /gene="yccS"
                     /locus_tag="JNZ89_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HAY8934547.1"
                     /translation="MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLT
                     IPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLST
                     SGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIG
                     HLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDESQAPLYDLALANGLLMATLN
                     QTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFR
                     FQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTL
                     GFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESA
                     LFRHAVRMSLVLCFGYAIIQITGMHHGFWILLTSLFVCQPNYNATRHRLKLRIIGTLV
                     GIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEG
                     FEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQ
                     GRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYIS
                     ALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRAD
                     SKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA"
     gene            complement(20008..20454)
                     /locus_tag="JNZ89_000584"
     CDS             complement(20008..20454)
                     /locus_tag="JNZ89_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HAY8934548.1"
                     /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI
                     TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC
                     ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE"
     gene            20577..22637
                     /gene="helD"
                     /locus_tag="JNZ89_000585"
     CDS             20577..22637
                     /gene="helD"
                     /locus_tag="JNZ89_000585"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HAY8934549.1"
                     /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL
                     AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV
                     LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPLPVNRLEEFDNCREAWRK
                     CQAWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLA
                     GAGSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITART
                     FHALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEE
                     MQWSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIK
                     LMAPLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAA
                     LLAALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNS
                     RIGKVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERIL
                     ILARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAAR
                     ESIMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPV
                     ARKP"
     gene            complement(22669..23127)
                     /gene="mgsA"
                     /locus_tag="JNZ89_000586"
     CDS             complement(22669..23127)
                     /gene="mgsA"
                     /locus_tag="JNZ89_000586"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HAY8934550.1"
                     /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA
                     TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
                     KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK"
     gene            complement(23223..23885)
                     /locus_tag="JNZ89_000587"
     CDS             complement(23223..23885)
                     /locus_tag="JNZ89_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HAY8934551.1"
                     /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL
                     RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE
                     NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
                     PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP
                     SS"
     gene            24058..24471
                     /locus_tag="JNZ89_000588"
     CDS             24058..24471
                     /locus_tag="JNZ89_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HAY8934552.1"
                     /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI
                     PVSPKVAGKTLLGQQGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL
                     GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK"
     gene            complement(24516..24833)
                     /gene="hspQ"
                     /locus_tag="JNZ89_000589"
     CDS             complement(24516..24833)
                     /gene="hspQ"
                     /locus_tag="JNZ89_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HAY8934553.1"
                     /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND
                     ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR
                     LRN"
     gene            complement(24891..26081)
                     /gene="rlmI"
                     /locus_tag="JNZ89_000590"
     CDS             complement(24891..26081)
                     /gene="rlmI"
                     /locus_tag="JNZ89_000590"
                     /EC_number="2.1.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HAY8934554.1"
                     /translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD
                     HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY
                     RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALVSALQTLYPECAIYDRSDVA
                     VRKKEGMELTLGLVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY
                     VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV
                     RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI
                     LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA
                     CRVM"
     gene            26176..26454
                     /gene="yccX"
                     /locus_tag="JNZ89_000591"
     CDS             26176..26454
                     /gene="yccX"
                     /locus_tag="JNZ89_000591"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HAY8934555.1"
                     /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV
                     EVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR"
     gene            complement(26451..26780)
                     /gene="tusE"
                     /locus_tag="JNZ89_000592"
     CDS             complement(26451..26780)
                     /gene="tusE"
                     /locus_tag="JNZ89_000592"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusE"
                     /protein_id="HAY8934556.1"
                     /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW
                     EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
                     PKPVKCI"
     gene            complement(26871..27530)
                     /gene="yccA"
                     /locus_tag="JNZ89_000593"
     CDS             complement(26871..27530)
                     /gene="yccA"
                     /locus_tag="JNZ89_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease modulator YccA"
                     /protein_id="HAY8934557.1"
                     /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
                     LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM
                     GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL
                     HLAISAVFILISSGAILFETSNIVHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
                     D"
     gene            complement(27737..27824)
                     /locus_tag="JNZ89_000594"
     tRNA            complement(27737..27824)
                     /locus_tag="JNZ89_000594"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(27788..27790),aa:Ser,seq:tga)
     gene            28251..29369
                     /gene="hyaA"
                     /locus_tag="JNZ89_000595"
     CDS             28251..29369
                     /gene="hyaA"
                     /locus_tag="JNZ89_000595"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 small subunit"
                     /protein_id="HAY8934558.1"
                     /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW
                     ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE
                     EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC
                     ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD
                     RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS
                     STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
                     VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA"
     gene            29366..31159
                     /gene="hyaB"
                     /locus_tag="JNZ89_000596"
     CDS             29366..31159
                     /gene="hyaB"
                     /locus_tag="JNZ89_000596"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase large subunit"
                     /protein_id="HAY8934559.1"
                     /translation="MSTQYETQGYTINNAGRRLVVDPITRIEGHMRCEVNINDQNVIT
                     NAVSCGTMFRGLEIILQGRDPRDAWAFVERICGVCTGVHALASVYAIEDAIGIKVPDN
                     ANIIRNIMLATLWCHDHLVHFYQLAGMDWIDVLDALKADPRKTSELAQSLSSWPKSSP
                     GYFFDVQNRLKKFVEGGQLGIFRNGYWGHPQYKLPPEANLMGFAHYLEALDFQREIVK
                     IHAVFGGKNPHPNWIVGGMPCAINIDESGAVGAVNMERLNLVQSIITRTADFINNVMI
                     PDALAIGQFNKPWSEIGTGLSDKCVLSYGAFPDIANDFGEKSLLMPGGAVINGDFNNV
                     LPVDLVDPQQVQEFVDHAWYRYPNDQVGRHPFDGITDPWYNPGDVKGSDTNIQQLNEQ
                     ERYSWIKAPRWRGNAMEVGPLARTLIAYHKGDAATVESVDRMMSALNLPLSGIQSTLG
                     RILCRAHEAQWAAGKLQYFFDKLMTNLKNGNLATASTEKWEPATWPTECRGVGFTEAP
                     RGALGHWAAIRDGKIDLYQCVVPTTWNASPRDPKGQIGAYEAALMNTKMAIPEQPLEI
                     LRTLHSFDPCLACSTHVLGDDGSELISVQVR"
     gene            31178..31885
                     /gene="hyaC"
                     /locus_tag="JNZ89_000597"
     CDS             31178..31885
                     /gene="hyaC"
                     /locus_tag="JNZ89_000597"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase b-type cytochrome subunit"
                     /protein_id="HAY8934560.1"
                     /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP
                     SVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW
                     QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF
                     APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDGTVISTMV
                     NGYRSHKFGKISNKECS"
     gene            31882..32469
                     /locus_tag="JNZ89_000598"
     CDS             31882..32469
                     /locus_tag="JNZ89_000598"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HAY8934561.1"
                     /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG
                     GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE
                     VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLLAAEQSALAQLAAWGSVP
                     QLANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG"
     gene            32466..32864
                     /gene="hyaE"
                     /locus_tag="JNZ89_000599"
     CDS             32466..32864
                     /gene="hyaE"
                     /locus_tag="JNZ89_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-1 operon protein HyaE"
                     /protein_id="HAY8934562.1"
                     /translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD
                     PKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGN
                     YRGVLNGIHPWAELINLMRGLVEPQQERAS"
     gene            32861..33718
                     /locus_tag="JNZ89_000600"
     CDS             32861..33718
                     /locus_tag="JNZ89_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein"
                     /protein_id="HAY8934563.1"
                     /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA
                     HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA
                     DDSKSEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP
                     IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG
                     YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC
                     QWLAEAAPT"
     gene            33852..35396
                     /gene="appC"
                     /locus_tag="JNZ89_000601"
     CDS             33852..35396
                     /gene="appC"
                     /locus_tag="JNZ89_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit 1"
                     /protein_id="HAY8934564.1"
                     /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG
                     KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWAFYSNYVGDIFGAPLAMEALM
                     AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD
                     IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALR
                     SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE
                     QDQERNAFAIKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG
                     NREPHVLQAFRELEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI
                     MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
                     WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ
                     PTQQQG"
     gene            35408..36544
                     /gene="appB"
                     /locus_tag="JNZ89_000602"
     CDS             35408..36544
                     /gene="appB"
                     /locus_tag="JNZ89_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HAY8934565.1"
                     /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD
                     ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL
                     AFDYRGKIADVRWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS
                     FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLSSQLATKRAALLVMLCFLLA
                     GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL
                     LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL
                     TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY"
     gene            36557..36649
                     /gene="cbdX"
                     /locus_tag="JNZ89_000603"
     CDS             36557..36649
                     /gene="cbdX"
                     /locus_tag="JNZ89_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit CbdX"
                     /protein_id="HAY8934566.1"
                     /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS"
     gene            36729..38027
                     /locus_tag="JNZ89_000604"
     CDS             36729..38027
                     /locus_tag="JNZ89_000604"
                     /EC_number="3.1.3.2"
                     /EC_number="3.1.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AppA family phytase/histidine-type acid
                     phosphatase"
                     /protein_id="HAY8934567.1"
                     /translation="MKAILIPFLSLLIPLTSQSAFAQSEPELKLESVVIVSRHGVRAP
                     TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYFGHYQRQRLVADGLLAKKGCPQP
                     GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNV
                     NVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPS
                     ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF
                     YLLQRTPEVARSRATPLLDLIMAALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG
                     ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT
                     PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL"
     gene            complement(38142..40322)
                     /gene="etk"
                     /locus_tag="JNZ89_000605"
     CDS             complement(38142..40322)
                     /gene="etk"
                     /locus_tag="JNZ89_000605"
                     /EC_number="2.7.10.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HAY8934568.1"
                     /translation="MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI
                     AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK
                     TIAELNLHDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN
                     GHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETF
                     TVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQL
                     PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY
                     KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR
                     QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR
                     RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA
                     DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI
                     DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL
                     LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS
                     LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE"
     gene            complement(40342..40788)
                     /gene="etp"
                     /locus_tag="JNZ89_000606"
                     /gene_synonym="yccY"
     CDS             complement(40342..40788)
                     /gene="etp"
                     /locus_tag="JNZ89_000606"
                     /gene_synonym="yccY"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine-phosphatase Etp"
                     /protein_id="HAY8934569.1"
                     /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL
                     VKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR
                     GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR"
     gene            complement(40776..41915)
                     /locus_tag="JNZ89_000607"
     CDS             complement(40776..41915)
                     /locus_tag="JNZ89_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HAY8934570.1"
                     /translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQY
                     DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE
                     LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
                     VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN
                     GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM
                     TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL
                     EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN"
     gene            complement(41961..44057)
                     /locus_tag="JNZ89_000608"
     CDS             complement(41961..44057)
                     /locus_tag="JNZ89_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HAY8934571.1"
                     /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ
                     MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD
                     QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
                     WGYAGNAGNITNPFCRVNDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL
                     RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN
                     FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFEAPEIQLRDKTLYMS
                     GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG
                     TAPGQSEQLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL
                     MSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN
                     NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYVKQRDWD
                     NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVG
                     VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK
                     YQLYPMTAEREVPVGQ"
     gene            complement(44057..44803)
                     /locus_tag="JNZ89_000609"
     CDS             complement(44057..44803)
                     /locus_tag="JNZ89_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HAY8934572.1"
                     /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPMEN
                     VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS
                     VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG
                     QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVEPPPGSQL
                     WLGFSAHVLPEKYADLNDQIVSVLTQRVPD"
     gene            complement(44800..45444)
                     /gene="gfcB"
                     /locus_tag="JNZ89_000610"
     CDS             complement(44800..45444)
                     /gene="gfcB"
                     /locus_tag="JNZ89_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein GfcB"
                     /protein_id="HAY8934573.1"
                     /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI
                     QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL
                     EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV
                     LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP"
     gene            complement(45551..45856)
                     /locus_tag="JNZ89_000611"
     CDS             complement(45551..45856)
                     /locus_tag="JNZ89_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-rich inner membrane protein GfcA"
                     /protein_id="HAY8934574.1"
                     /translation="MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTG
                     ATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR"
     gene            complement(46298..46510)
                     /gene="cspH"
                     /locus_tag="JNZ89_000612"
     CDS             complement(46298..46510)
                     /gene="cspH"
                     /locus_tag="JNZ89_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspH"
                     /protein_id="HAY8934575.1"
                     /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV
                     LIPGLRVEFCRVNGLRGPTAANVYLS"
     gene            46796..47008
                     /gene="cspG"
                     /locus_tag="JNZ89_000613"
     CDS             46796..47008
                     /gene="cspG"
                     /locus_tag="JNZ89_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspG"
                     /protein_id="HAY8934576.1"
                     /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT
                     LNENQKVEFSIEQGQRGPAAANVVTL"
     gene            47019..47207
                     /locus_tag="JNZ89_000614"
     CDS             47019..47207
                     /locus_tag="JNZ89_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HAY8934577.1"
                     /translation="MTQHLHFRCPCCHGSQYRTSAFDVTERNPLGAKCIFCKSTMITF
                     DNVTLQIRTDHAPLDFTK"
BASE COUNT        11629 a        11729 c        12408 g        11456 t
ORIGIN      
        1 tagcgatgtg cagtcgggta aagtgaatgc cagcgcgaca tttgtacttc attatgacta
       61 atacgtggaa cagattggcg ctcttgattt tcgccgtttt atcgctgctg gtggcgggtg
      121 aattgcgggc aggagtggtg gtcggcggaa cgcgatttat ctttccggca gacagagaat
      181 cgatatctat tttactgact aataccagtc aggaatcctg gctgattaac agtaaaatca
      241 accgcccaac gcgttgggcc ggggggaaag cgtcgacagt gccagcacca ttactggccg
      301 ctccgccact tattctcctg aagcccggta ctacaggcac gttgcgcttg ctgagaacgg
      361 aaagcgacat cttgcctgtg gatcgcgaaa cgctatttga gttaagcatt gccagcgtgc
      421 catccggcaa agttgaaaat cagagcgtaa aagtggcgat gcgctcggta tttaaactgt
      481 tctggcgacc cgaaggtttg ccgggcgacc cgctggaagc ttatcaacaa ttacgctgga
      541 cacggaattc gcagggtgta caactcacta acccaacgcc ttactacatt aacctgattc
      601 aggtgagcgt aaatggtaaa gcgttaagta atgcgggagt tgtgccgcct aaaagccagc
      661 gtcagacaag ctggtgtcag gcaatcgcac cgtgtcatgt cgcctggcgg gcgataaatg
      721 attacgacgg gttgagtgca aagaaggagc aaaatctgcc ctgaaacagg ttcggaaaac
      781 gtttgcgttt tttttgccgc aggtcaattc ccttttggtc cgaactcgca cataatacgc
      841 ccccggtttg cacaccggga atccaggaga gttcatgtac taccccttcg ttcgtaaagc
      901 ccttttccag ctcgatccag agcgcgctca tgagtttact tttcagcaat tacgccgtat
      961 tacaggaacg ccgtttgaag cactggtgcg gcagaaagtg cctgcgaaac ctgttaactg
     1021 catgggcctg acgtttaaaa atccgcttgg tctggcagcc ggtcttgata aagacgggga
     1081 gtgcattgac gcgttaggcg cgatgggatt tggatcgatc gagatcggta ccgtcacgcc
     1141 acgtccacag ccaggtaatg acaagccgcg tctctttcgt ctggtagatg ccgaaggttt
     1201 gatcaaccgt atgggcttta ataatcttgg cgttgataac ctcgtagaga acgtaaaaaa
     1261 ggcccattat gatggcgtcc tgggtattaa catcggcaaa aataaagata cgccagtgga
     1321 gcagggcaaa gatgactatc tgatttgtat ggaaaaaatc tatgcctatg cgggatatat
     1381 cgccatcaat atttcatcgc cgaatacccc aggattacgc acgctgcaat atggtgaagc
     1441 gctggatgat ctcttaaccg cgattaaaaa taagcaaaat gatttgcaag cgatgcacca
     1501 taaatatgtg ccgatcgcag tgaagatcgc gccggatctt tctgaagaag aattgatcca
     1561 ggttgccgat agtttagttc gccataatat tgatggcgtt attgcaacca ataccacact
     1621 cgatcgttct cttgttcagg gaatgaaaaa ttgcgatcaa accggtggct taagtggtcg
     1681 tccgcttcag ttaaaaagca ccgaaattat tcgccgcttg tcactggaat taaacggtcg
     1741 cttaccgatc atcggtgttg gcggcatcga ctcggttatc gctgcgcgtg aaaagattgc
     1801 tgcgggtgcc tcactggtgc aaatttattc tggttttatt tttaaaggtc cgccgctgat
     1861 taaagaaatc gttacccata tctaattatt tcttcgaatt cctctttata agataatcag
     1921 ggctttattt tcagccctgg ttgttttata ttcatcgctg ttgcttattt agacattttg
     1981 tacttttatt gttgaggtta ttaagcgaag cgacaatgga ttgtgttgct gcggttttat
     2041 agggtagggg agaggcagat gcgaattaaa ccagacgata actggcgttg gtattacgat
     2101 gaagagcacg atcgaatgat gctcgattta gccaatggta tgctatttcg ctcacgtttt
     2161 gcgcgcaaaa tgttgactcc agatgccttt tctcccgcag gcttttgcgt tgacgacgcc
     2221 gcgctctatt tctcttttga agaaaagtgc cgcgatttta atttatctaa agaacaaaaa
     2281 gccgaactgg tgctgaatgt actggtagca attcgctatc tcaaaccgca aatgccgaaa
     2341 agctggcatt ttgtttccca tggtgaaatg tgggtgccca tgccgggcga tgcggcctgc
     2401 gtttggttga gcgatactca cgagcaggtc aatttgctgg tcgttgaatc tggcgaaaat
     2461 gccgcactat gcctgctggc acaaccctgc gttgttattg cgggtcgcgc gatgcagttg
     2521 ggcgacgcca ttaaaatcat gaacgacagg ctgaaaccgc aggttaatgt tgacagcttc
     2581 agcctcgaac aggcagtcta acgcgccaac ttaagtgcag tcttcggtac acagctacag
     2641 caaagaatgg tgccatcatc gcccattgct gattttttca gcggcgagac ttcgccttct
     2701 aaaatctgaa cacggcaact tccacaaatg cccgcgcggc aagaataagg gatacgaatt
     2761 ccctgatttt ctaattgctc cagcaacacc tgttggttat ttccacgaaa tgcctgtccc
     2821 tgccagtcaa tatctacatt tgcgtccggt tgttgcgtga tgttggcggt atcatcagcg
     2881 gcagctgcgc cgtaaatttt tgccggagcc gttgccagaa tttccacctc atcgccaacg
     2941 cgaatcacgc cgctattacg ggcaattaaa ttctgaccaa aatcgacatc gccgttatcc
     3001 tgggcagtgc ggaaagattg caatgttttt aatggttcgc ctgccggatg tttttgccct
     3061 ttttctgggc tgacggtggt gaaaatacag cggctacaag gtttaaccac atcaaacacc
     3121 acatcaccaa tgcgaatcac tttccagcga tcttcttccc aggctgacgc gccggaaacc
     3181 accagattgg ggcggaattg ctccattttt acactggccg gacaacgttg ttggagatca
     3241 cgtaacgagg cttcgttagc aagaaggtaa ggatagccat cagcaaatga cagaggtaca
     3301 gtgttgtggc gtttcacgcg ccgggtcatt tgtggcccca cccagcgtaa ttgcacttcg
     3361 cgggagaaaa atccacttag ccatttgttg atcgcgtctg gcgcaattcg cgcggtaaaa
     3421 tgtgtgcccc aaacttcggt tggtgcgtct tgtgtggcga aatcagcaaa acgaacatat
     3481 gcgctactgc catctggtgc ggtgagatgc aagccatcat gcacaggtga aggagtaaac
     3541 cgtaccatct ggggaaactg gcgagcggta ataaacgtac cgtcaggttc cgtgatcata
     3601 aagatgcgat cgaaggccag accactgaca tcagccagag catgtgtaag accaatgccg
     3661 cgcatcgatt taacaggatg aataaaaagc cgggttaatg tcgccacggt gcggtcctca
     3721 aatgaaaata agccctcaac tttatgacat gacgcgctta ttagctataa tgcgcaacaa
     3781 ttttcttagc gcctgtccca ttaggctatt ttatttgtca gtttggccct gggttgtgct
     3841 cgaaatcctc acgtacttgt gtacgctccg ttttctccgc gctgtccatg tccagactga
     3901 ctgcaacaat tacgcctact gcggtaggct cttagagtaa aagtgacgat atgaattctc
     3961 tgtttgccag tacggcccgt gggctggaag agctgttaaa aactgaactg gaaaacctgg
     4021 gggccgttga atgccaggtg gttcagggtg gggtccattt caagggcgac acacggcttg
     4081 tttaccagag cctgatgtgg agccgcctgg cctcgcgtat tatgttgccg ctgggcgagt
     4141 gtaaggttta cagcgattta gacctctatc tcggtgttca ggcgatcaac tggacagaga
     4201 tgtttaatcc tggcgcgacc ttcgctgtcc acttcagtgg tttgaatgac accatccgca
     4261 acagtcagta cggcgcgatg aaagtgaaag acgcgatcgt cgatgctttc acgcggaaaa
     4321 atctgccgcg tccaaatgtt gatcgcgatg cgccggatat ccgcgttaac gtctggctgc
     4381 ataaagaaac cgccagtatc gctcttgatc tgagtggtga tggtttacat ctgcgtggct
     4441 atcgcgatcg tgctggtatt gcgccgatca aagaaaccct ggcagccgct attgtgatgc
     4501 gatccggctg gcagcctgga acaccgctgc tcgatccgat gtgtggttcc ggtacgttgc
     4561 tgattgaagc ggcgatgctg gcgaccgatc gcgcacccgg cttgcaccgt gggcgttggg
     4621 gctttagcgg ctgggcgcag catgatgaag ctatctggca ggaagtgaaa gcggaagcgc
     4681 aaactcgcgc ccgtaaaggc ctggctgagt atagctctca tttttacggt tcggacagcg
     4741 acgcacgggt gattcaacgt gcacgcacta acgcccgtct tgcggggatt ggtgaactga
     4801 tcacctttga ggtgaaagat gtcgcgcaac tgaccaatcc gctgccgaaa gggccgtacg
     4861 gcacagtgtt gagcaacccg ccatacgggg aacgtctgga cagcgaaccg gcgctgattg
     4921 cgctgcatag cctgctgggt cggatcatga aaaaccagtt tggtggctgg aatctctctt
     4981 tgtttagtgc ctcgccggat ctgctaagct gcttgcagct gcgtgcagac aaacagtaca
     5041 aggcgaaaaa cggcccgctg gactgcgtac agaaaaatta ccacgttgcc gaaagcactc
     5101 cagacagcaa accggcgatg gtagcggaag actacgccaa ccgcctgcgt aagaacctca
     5161 aaaaattcga gaagtgggct cgccaggaag gaattgaatg ttaccgcctg tatgacgccg
     5221 atctgccgga atataacgtt gccgttgacc gttattccga ctgggtggtg gtgcaggagt
     5281 atgcaccgcc aaaaactatt gatgctcaca aagcgcgtca gcgtctgttc gatattatcg
     5341 ctgcaaccat ttcggtactg gggattgcgc caaacaaact ggtgctgaaa acccgtgaac
     5401 gccagaaggg caaaaaccag taccagaaac tgggcgagaa gggcgagttt cttgaagtta
     5461 ccgaatataa cgctcacttg tgggtgaacc tgacggatta tctcgatact ggtctgttcc
     5521 tcgatcaccg tatcgcccgc cgtatgctcg gtcagatgag caaaggcaaa gatttcctca
     5581 acctgttctc ttataccggt agcgccaccg tgcatgcggg attaggcggc gcgctcagca
     5641 ccaccaccgt ggatatgtcg cgtacttatc tggagtgggc agaacgcaac ctgcgtctga
     5701 atggcctaac cgggcgtgcg catcgcctga ttcaggccga ttgcctggcg tggctgcgtg
     5761 aggcaaatga acagtttgat ctgatcttta tcgatccgcc aaccttctct aactcaaaac
     5821 gaatggaaga tgcgtttgat gttcagcgcg atcatctggc gctgatgaaa gatttgaaac
     5881 gtctgctgcg tgcaggtggg acgatcatgt tctcgaacaa caaacgtggc ttccgtatgg
     5941 atctcgacgg cctggcaaaa ctgggactga aagcacaaga aattacgcaa aaaacgctct
     6001 cccaggattt cgcccgtaac cgccagatcc acaactgctg gctgattacc gcagcctgaa
     6061 aggaatagta atgtcattaa tcagtatgca tggcgcatgg ctgtcgttca gcgacgcgcc
     6121 gcttctcgat aacgcagaac tgcatatcga agataacgaa cgtgtttgtc tggtgggccg
     6181 caacggcgcg ggcaaatcga cgttaatgaa aatcctcaac cgtgaacaag ggctggatga
     6241 cggtcgcatt atttacgagc aagatttgat tgtagctcgt ctgcaacagg atccgccgcg
     6301 taacgttgag ggtagcgttt atgatttcgt tgccgaaggc attgaagaac aagcggaata
     6361 tctgaaacgc tatcacgata tttcgcgcct ggtgatgaac gacccgagcg agaaaaatct
     6421 caacgaactg gcgaaggttc aggaacagtt ggatcaccac aacctgtggc agctggaaaa
     6481 ccgcatcaac gaagtgctgg cgcaactggg gttagatcct aatgttgcgc tgtcgtcgct
     6541 ttccggcggc tggttgcgta aagcggcatt aggacgcgcg ctggtgagta atccgcgcgt
     6601 gctgttgctt gatgaaccga caaaccacct ggatattgaa accatcgact ggctggaagg
     6661 gttccttaaa accttcaatg ggacgattat tttcatctcc cacgaccgtt cgtttatccg
     6721 caatatggcg acgcgcattg ttgatctcga tcgcggcaag ctggtgacct atccagggaa
     6781 ttacgaccag tacctgcttg aaaaagaaga agccctgcgc gtggaagaac tacaaaatgc
     6841 cgagttcgat cgcaaactgg cgcaggaaga ggtgtggatc cgccagggga tcaaagcacg
     6901 ccgtacccgt aatgaaggcc gcgtacgcgc cctgaaagca atgcgtcgcg agcgtggtga
     6961 acgtcgcgaa gtgatgggta ccgcaaagat gcaggtggaa gaggccagcc gctccggtaa
     7021 gatcgttttc gaaatggaag acgtttgcta ccaggttgac ggtaagcaac tggtgaaaga
     7081 tttttcggcc caggttctac gtggcgacaa aattgtcctg attggtccga atgggtgcgg
     7141 caaaaccacg ctgctgaaac tgatgctcgg tcagcttcaa gcggacagcg ggcgtattca
     7201 cgttggcacc aaactggaag tggcttattt cgatcagcac cgcgcggaac tggatcccga
     7261 taaaacggtg atggataaca ttgccgaagg taagcaagag gtgatggtta acggcaagcc
     7321 acgccacgta ttgagctatt tgcaggactt tctgttccat ccgaaacggg cgatgacgcc
     7381 ggtacgtgcg ctttctggcg gtgagcggaa ccgcttgctg ctggcgcgtt tgttcctcaa
     7441 accaagcaac ttattgattc ttgacgaacc gaccaacgat cttgatgtcg aaacgctgga
     7501 actgctggaa gaactgatcg acagctatca gggcacggta ttgctggtta gccacgatcg
     7561 tcagtttgtc gataacaccg ttacagaatg ttggatcttc gaaggcggcg gtaaaattgg
     7621 tcgttatgtc ggcggttatc atgatgcccg tggtcagcaa gagcagtatg tggcgctcaa
     7681 acagcctgcg gtgaaaaaaa ccgaagaagc cgccgcggca aaagcagaaa ctgtaaaacg
     7741 cagcagtagc aaactaagct ataaattgca gcgcgaactg gagcagctac cgcaattgct
     7801 cgaagatctg gaggcgaagc tggaagccct acagacgcag gtggcggatg cttccttctt
     7861 cagtcagcca catgagcaga cacaaaaagt gctcgccgat atggctgctg cagagcagga
     7921 gctggagcaa gcctttgaac gctgggagta tcttgaagcg ttaaaaaatg gtggctgatc
     7981 gcaaaatagt cgatttaaac agagacagct gacaacggta aaattgcctg atgaactggg
     8041 tttatcaggc atgaaaacca acactttgtt agtcatctgt aaaatagcgc atcattaagg
     8101 agtaccaatg tgcgaacatc atcatgccgc gaagcacatc ctgtgctcgc agtgtgacat
     8161 gctggtggcg ttaccgcgcc ttgagcatgg tcagaaagcg gcatgtcccc ggtgtggcac
     8221 aacgttaacc gtggcgtggg atgcccctcg gcagcgtccg accgcctatg cgttggctgc
     8281 actgttcatg ctgttgctgt ccaacttgtt tccttttgtg aatatgaacg ttgcaggagt
     8341 taccagtgaa attacattac tggaaattcc cggcgtgctt ttttctgagg actacgccag
     8401 cctcggcacc tttttcctgt tgtttgtgca actggttccc gcgttttgtc tgataaccat
     8461 tctgttactg gtgaatcgcg cggaattacc ggtccgttta aaagagcaac tggcacgggt
     8521 gctttttcaa ctcaaaacct ggggaatggc ggagattttc ctcgcgggtg tgctggtcag
     8581 tttcgttaaa ctgatggctt acggcagcat tggggtaggc agcagctttc tcccctggtg
     8641 tttattttgt gtcctgcaac tgcgcgcttt tcagtgcgtt gatcgtcgct ggttatggga
     8701 cgacatcgcc ccgatgccag aactgcgcca gccgctaaaa ccaggcgtca cggggatacg
     8761 tcaggggctg cgttcgtgct cctgttgtac ggcaatcctt cctgctgatg aacccgtgtg
     8821 cccgcgttgt agtaccaaag ggtacgttcg gcgtagaaac agcctgcagt ggacactcgc
     8881 gctgcttgta acgtccatca tgctgtatct tccggctaat attttgccca tcatggtgac
     8941 ggatttatta ggctcgaaga tgccgtcgac gattctcgct ggggtcattc tgttatggag
     9001 cgaaggctct tatcccgtcg ctgcggtgat ctttctggcc agtattatgg tgccaacgtt
     9061 aaagatgatc gccatcgcgt ggctgtgttg ggatgccaaa gggcatggca agcgcgacag
     9121 tgaaagaatg catttgattt atgaagttgt tgagtttgta ggccgctggt cgatgattga
     9181 cgttttcgtt atcgcggtgc tctcggcgct ggtgcgtatg ggaggtttaa tgagtattta
     9241 tccggcaatg ggtgcattaa tgtttgcttt agtcgtcata atgacaatgt tttctgctat
     9301 gacgtttgac ccgcgtttgt cgtgggatcg tcaacctgaa tcagagcatg aggagtcctg
     9361 acagtatgga atctaataat ggggaagcca aaatccagaa agtgaagaac tggtctcccg
     9421 tgtggatatt tcctatcgtc acggcgctca ttggggcctg ggttctattt tatcattaca
     9481 gccatcaggg accggaagtg accctgatca ccgcgaatgc ggaaggaatt gaaggtggca
     9541 aaaccaccat taaaagccgt agcgttgacg tcggcgtggt tgaaagcgcc acactggctg
     9601 atgatttgac gcacgttgaa atcaaagcgc ggctgaattc cggtatggaa aaattgctgc
     9661 ataaagacac cgtcttttgg gtggtgaaac cgcagattgg tcgcgaaggg attagcggcc
     9721 tgggaacgct gctgtctgga gtttatatcg aactgcagcc aggcgcgaaa ggcagcaaaa
     9781 tggataaata cgatttgctg gactcgccac cgttggcccc gcctgatgcg aaaggtatcc
     9841 gtgtgattct cgatagcaaa aaagccgggc agctctcgcc aggagatccg gtgctgttcc
     9901 gtggctatcg ggtaggttcg gttgaaacca gcaccttcga tacgcaaaaa cgcaatatca
     9961 gttatcaact gttcatcaat gcaccttatg accgactggt gaccagcaat gttcgcttct
    10021 ggaaagatag tggcattgcg gttgatctga cgtcagcggg gatgcgtgtg gagatgggct
    10081 cattgacaac gctgcttagt ggcggtgtta gctttgatgt gccggaaggt ctggatttag
    10141 ggcagccagt ggcaccgaaa acagctttcg ttttgtatga tgatcagaag agcattcagg
    10201 attcgttgta caccgatcac attgattatc tgatgttctt taaagattcg gtacgcggtc
    10261 tgcaaccggg agctccggta gaattccggg gtattcgcct gggtaccgta agcaaagtgc
    10321 cattctttgc gccgaatatg cgtcagacat ttaacgatga ttaccgtatt ccggtactga
    10381 ttcgtatcga gccagagcgg ctgaaaatgc agcttggcga aaatacggat gttgttgagc
    10441 accttggcga attgttgaaa cgtggtttac gcggatcgct gaaaaccgga aacctggtca
    10501 ctggtgcact gtatgttgat ctcgatttct atccaaatac gcctgcaata accggtattc
    10561 gtgaatttaa tggttatcag attatcccga ctgttagcgg cggcctggcg caaatccagc
    10621 aacgactgat ggaagcgttg gataagatca acaaactgcc attgaatccg atgattgaac
    10681 aggcaaccag tacgctttct gaaagtcagc gcacaatgaa aaacctgcaa acgacgctgg
    10741 atagcatgaa caagatcctc gctagccagt cgatgcagca gttgccgacg gatatgcagt
    10801 caacgttgcg tgaattgaat cgcagcatgc agggcttcca gcctggctcc gcagcctaca
    10861 acaagatggt ggcggatatg cagcgccttg atcaggtgtt gcgagaactg caaccggtgc
    10921 tgaaaacgct caatgagaag agtaacgcgc tggtatttga agcgaaggac aaaaaagatc
    10981 cagagccgaa gagggcgaaa caatgaaaaa gtggctagtg acgattgcag cactgtggct
    11041 ggccggatgc agctccggcg aaattaataa aaactattac cagttacctg tggtgcagag
    11101 cggtacacaa agtaccgcca gccagggcaa tcgtctgtta tgggtagagc aggtcactgt
    11161 tcctgactat ctggcgggga atggtgtggt ttatcaaacc agtgatgtga agtatgtgat
    11221 tgccaacaac aacttgtggg ccagcccgtt ggatcaacag ttgcgcaaca ccctggttgc
    11281 caacctgagt acgcaactgc ccggctgggt ggttgcctcc cagcctctgg gaagcgtcca
    11341 ggacacgctc aatgttaccg taacggagtt taacggtcgc tatgatggca aggtcattgt
    11401 cagtggtgag tggctgttga accaccaggg acaactgatc aaacgtccgt tccgtctgga
    11461 aggagtgcaa actcaggatg gttacgatga gatggttaaa gtgctggccg gtgtctggag
    11521 tcaggaagcc gcttctattg cacaagagat aaagcgtcta ccttaattat aaagatttgt
    11581 aagtataacc gtctccggta tgttgcctga ggcggttttt ttgtttctaa cgtgcggaaa
    11641 aatttgttcc tcttcacatt ttttgtacaa ccgacatgcc cgtgtagctc acaaatatga
    11701 cagtggcgtg aattttgcgc attgacggca gttatgattc gcggtattgc ttaactgtga
    11761 ttgcacattt agtaatcact gttttctttt ccaccagaaa ccagtatgag ggaaacgagg
    11821 catgaagaga caaaaacgag atcgcctgga acgggcacat caacgtggtt atcaggccgg
    11881 catcgccgga cgctcaaaag aaatgtgtcc ctatcagacg ctgaatcaaa ggtcacaatg
    11941 gctgggaggc tggcgagaag ccatggcgga cagggtagta atggcctgat tctgtctctt
    12001 taaaaagaaa cctccgcatt gcggaggttt cgccttttga tactctgtct gatgataatc
    12061 agaaggcaga cgtatcctgg aacagaccga ctttcaggtc gctggcggta tagatcagac
    12121 gaccatcaac cagcacttcg ccatctgcca gacccataat cagacgacga ttaacaatgc
    12181 gtttaaagtg aatacggtag gtcacttttt tcgctgtcgg cagtacctga ccagtgaatt
    12241 tcacttcgcc aacgcccagc gcgcggcctt taccttcgcc gcccagccag ccgaggtaga
    12301 accctactag ctgccacatt gcgtccaggc ccaggcatcc cggcataacc ggatcgccaa
    12361 tgaagtggca tccgaagaac cacagatccg gattgatatc cagttctgct tcaacatacc
    12421 ctttgtcgaa gttaccaccc gtttcggtca ttttgaccac acggtccatc atcagcatgt
    12481 tcggtgctgg caattgcggg cctttagcgc caaacagttc accgcgacca gaggcaagaa
    12541 ggtcttcttt tgtataggat tcgcgtttat ctaccatgtt ctctgtaagc cttattttat
    12601 tgaagcacgc aggatagcta acacgtgtac gctgaacaag tccgatcagt tcggaataaa
    12661 ccagttcagc caacgtaatg gccatggaaa acggtgacgt ccttcctgtt gcgatgcttg
    12721 cgcgatacgt tcctggatgg tttgcatcag cgtcgtttgg ccttcgccat cccacaccag
    12781 atttaataat aacggcagtg cgtcagtcac atcgtctact gcccagatgg tgaatttgcc
    12841 ttcttctacc gctttcacca gttcactgtg aagacttaaa tggcgaacgt tagctgtggg
    12901 gataatgaca ccttgtttcc cggttaactc acgttgctgg caaatagcaa agaagccttc
    12961 gattttctca tttaaaccac cgaccggctg ggcgcgaccg aactgatcga ctgaacctgt
    13021 gatagcgata ctctgattca ccggcacatc ggcgagggcg cttatcaggg cgcagagttc
    13081 agccatcgag gcactatctc catcaacttc actgtatgac tgctcaaatg tcagcgatgc
    13141 tgagaagggg atctgttgct caagctgtag ttccgacatc aggaacgctt gcatgatcat
    13201 catccctttc gcatggatat tgccgccaag ttccgctttg cgttcgatgt cggtgaattc
    13261 accatcgcca atatgcacaa cgcagctaat gcgagaaggt tcgccaaaag cgcgtggatg
    13321 acccggaaat tcaatgaccg aaagggcgtt aatttgcccg atgcgttcgc cttcggtttc
    13381 aatcaggatt tgctcctgaa ggatctcatc ctgcatacgt tcagcgagga aaccttcgcg
    13441 ccattcacgc tgctgcagca ttaagtttag ctgctcgccg gagaaggtgt cgccatcaca
    13501 cagggaggcg acctctttac actggcggag gatccactgc gggctaagcg gaagtgtttc
    13561 ttgttcaccg gtgtagcgtg ctgcttcgcg gataagtacc ggccaggcat ccgctcccgg
    13621 ggcaggtaag tgattatgtc tggcggtaaa tgtcacccag cgacaccact ggcttactga
    13681 ctccgcatcg acaatctgca gagtatcttc aaattcgcta taaatagcct gctctgaaag
    13741 ctctggctcc atctcctgga aatcagccaa tgattcgcgt tcgcctacca gaatgacttt
    13801 cagcttcaat ggcatcgaag gcacagagac agggagaggg cgcgactcat caaacgcaac
    13861 ccagtcaaaa cgctcgcggt taacgatatt tttcagccgc atccacagca gaggttgcgc
    13921 cagcagtgta cgcaaagaga tgatgagaat accgccattt gcctgatgca ccagaccagg
    13981 ctgcagggta atgtcgccat taaactggcg caggcagcca aagagttgct ccgcttctac
    14041 ccagtcggca gcgacaactt gcgttaaagt cgcaaaatta tcatctgcac tcactgcgtg
    14101 acgtaagcgg atggagtggc cggaaacctc atagtgatcg cccaccagtt ggcctgcatc
    14161 gctttgtagc gtacgcgcgg catcggcaat aagattcaga tactcagact cttccggggc
    14221 cttagccagc ataaaagagg aggatgctcg cgtatgcagc aactgctcca gcgcaaattg
    14281 cagccgcggt tgagtatcac tgaataaagg atcgttttcg tcaatcaaat ttggctgagc
    14341 aaatatttcc tgatagctat cggtatcagg aaccaggtca cgccatgcaa gtttcgtaat
    14401 ggtcaaagtt gatgtttttt agtctgttgt caaagccgcg attataccgt aaccggcact
    14461 acagcacacg tagaaagcac cgacaatact cctggcatgg gcgttaaagc tcacaggatg
    14521 gagattcttt tcttcactgg cctaaaaagc tgatattctg taaagagtta cacggtaaca
    14581 ttgagatcgc tatgaaatat caacaacttg aaaatcttga aagcggttgg aaatggaagt
    14641 atctggtgaa gaagcatcgc gaaggggagt taattacccg ttacatagaa gccagtgccg
    14701 cccaggaagc cgtcgatgtg ttgctctcgc tggaaaatga acccgtgctg gtaaatggct
    14761 ggattgacaa gcatatgaat ccggaactgg tcaatcgcat gaagcaaacc attcgggcca
    14821 gacggaagcg ccattttaat gcggaacacc agcatacgcg caaaaagtcg atcgatctgg
    14881 aatttattgt ctggcaacgt ctggctggtc ttgcgcagcg tcgcggtaaa acgctttctg
    14941 aaacgattgt tcagctgatt gaagatgcgg aaaacaaaga gaaatacgcg aataaaatgt
    15001 cttctctgaa gctggatctg caggcattgc tgggtaagga ataactgacg aaagtcagtt
    15061 caatttacta aaggcaaaaa aaaccccgca gcagcggggt ttttctacca gacgataact
    15121 taagcctgcg gctgagttac aacgtctttg atacctttaa cttcgatctc tacgcgacga
    15181 tccggagcca ggcagtcgat cagtgcagca cgctgtttca cgttgtcaca ggtgttgcca
    15241 gtaaccgggt tggattcgcc cataccacgt gcggagatct tgtctgccgg gatacctttg
    15301 gagatcaggt aatcaacaac agactgagca cggcgctcgg acagaccctg gttgtaagcg
    15361 tcagaaccga tgcggtcggt gtaacccaga acaactacgg aaccgtcttt cggatccagg
    15421 ttgctcagct ggctgtacag ctgatccaga gcagcctgac cttccggttt cagggttgct
    15481 ttgttgaagt tgaacagaac gtcagacttc agagtgaagt gcttggtctg tacttccggt
    15541 gccggagctg gagccggagc aactactgga gctgcttcgc cctgaccgaa acggtaggaa
    15601 acacccaagc tcagcatgcc gttgtccgga cgagtgccga tggtgtgtgc gtcaccgatg
    15661 ttgttggtcc actggtattc cagacgggta gcgatttcag gagtgatcgc gtactcaaca
    15721 ccgccagcga agaccggaga aacgccggtg tcgtggtttt taccataaac gttggattta
    15781 gtgtctgcac gccataccat accacccaga cgagtgtaga tgtccaggtc gtcagtgatt
    15841 gggtaaccca gtttagcggt cagttgaacg ccctgagctt tgtatgcacc gttttcaacg
    15901 ctgcctttgt acggcatacg acctaaccag tcgtaaccca tttcaaagcc aacatacggg
    15961 ttaacctggt aaccaccaaa agcaccagcg cccagttggt tttcatgggt cgggccattg
    16021 ttgttgatga aaccagtgtc atggtactgg gaccagccca gtttagcacc agtgtaccag
    16081 gtgttatctt tcggagcggc ctgcgctacg gtagcgaaac cagccagtgc cactgcaatc
    16141 gcgatagctg tctttttcat tttttgcgcc tcgttatcat ccaaaatacg ccatgaatat
    16201 ctccaacgag ataacacggt taaatccttc accgggggat ctgctcaata ttaactctac
    16261 cgatatcttc ggcttatgcc gagcacccct ggcgatgtaa agtctacaac gtagttgaaa
    16321 acttacaagt gtgaactccg tcaggcatat gaaaaaaaag tcttgtataa ggtatgttta
    16381 atcttttttg tcagcgacaa tttacagaag aaaatcgcgg aaaccgcttc agacaagcct
    16441 ccgcaaggaa aattagtcac gactgaaagc attggctggg cgacaaaaaa agttccagga
    16501 ttaatcctaa atttacttaa tgatacaaat tagagtgaat ttttagcccg gaaagttgtc
    16561 tcgtggcgtg agaggatgcg cttaccggac gcataataaa ccccatagcg ttaccttcat
    16621 ttgccgcatc aacaagttca gcatgctctt cttcagtcaa atcatctgcc aaccaaccga
    16681 tcaccacact gtaattgccc gtgcgtaaag cgcgaaccat tgactccaca gtgtggcaag
    16741 gggagagctg gctaatctgc attactttcg ttaagggtag cccagatgcc tgaacccatt
    16801 cccgactcag tttttgttgc ggtgttaacc agagttgcca gcgcgattgc tgaccgagtt
    16861 gctgtaacaa tggcaacagt agaagttgcg tcatcatggg ctgatcttcg cgatagacaa
    16921 cttcactgat aagcccggct gtagtgtttt ccgtagagac acgcgcaatt ttacttgctg
    16981 cggatgagaa cgacgaagaa cgatgtgcat agcctgaagt gtacataatc aatccagccc
    17041 ctgtgagtta ctgtatgaat atacagtaca tccagtgaca acaaagatca accctatttt
    17101 cggaaagagc ctcgcaaatt ttttcgttgg tgacgggaaa acataaatta atcttgcccc
    17161 ttaagaataa gttgcctatt ttcgtagtta acggatccgt taatgtgaat cattctttta
    17221 tgttatgatt ttaaaaggaa ttttatgaaa agcctctcct ataagcggat ctataaatca
    17281 caagaatacc tggcaatgtt gggcacaatt gaataccgat cattgtttgg cagttacagc
    17341 ctgaccgttg acgacacggt gtttgcgatg gtttctgatg gtgagttgta tcttcgggct
    17401 tgtgagcaaa gtgcacagta ctgtgtaaaa catccgcctg tctggctgac atataaaaag
    17461 tgtggccgat ccgttaccct taattactat cgggttgatg aaagtctatg gcgaaatcaa
    17521 ctgaagctgg tgcgtctgtc gaaatattct ctcgatgcag cgctgaaaga gaaaagcacg
    17581 cgcaataccc gggaaagact gaaagatttg cccaatatgt cttttcatct ggaagcgatt
    17641 ctcggggagt ggggattaag gatgtacggg cgttacgtat acttggggca aaaatgtgtt
    17701 ggttgcgact gcggcagcaa aacagtctgg tgacagaaaa gattctgttt atgcttgaag
    17761 gtgccattat cggcattcat gaagctgcgc tcccggtggc acgccgccag gagcttgcag
    17821 aatgggctga ctcacttacg ccgaaacagg agtttcctgc ggaacttgag taatctggcg
    17881 ttgcagacga ccaatctcag gcagtaatgc aatcaataat ccaacttgtt gtacgaccag
    17941 aggttctttg ctgtctgccc gtggttcaag ttgctgcatc cgctgtttca ggctagctaa
    18001 tgcctcattg acgcgttctt catcagcagg ttgatgatgt aacgcgtcat caacatagca
    18061 aactgcgtca tcaagaaacg ccagaatttc aggattagtt aactgctccc ggtgagcacc
    18121 gagggctgag atatagctgg taaacgtatg gttaaggcac agcaaccgaa acgcggcttc
    18181 gcgaatttgc ggggtaacgt tcggctcgct ggacatattt gataccaccg acgccagctc
    18241 agcatcacgg ttgtgtgcat cgcggcgggc aatacgatac gccagacggt tatcacgccc
    18301 ctgatggtat tgctccagta tggcatcgag ataccgacag ttggcctctg tggcgcgttc
    18361 gagcatgcgc ggcaaattgc gaaactgcca gtcaggccag atgtagctca ctgccgccca
    18421 cgcaatggca caaccaatca gcgtatcgat tacgcgaggt aacgctactt caaaaccttc
    18481 acccagtaag ttaaaacaca gtagcaccaa aagtgtgatg aacatcgttg catgagcgta
    18541 ttgcacgtta cggaaggcaa aaaagagcac gccggtaata accagcagca ccagctgccc
    18601 ttccagtgat ggcacaaacc acagcacagg aatgccaatg gcgataccta ccagcgtacc
    18661 aataatcctt aacttcaggc ggtggcgcgt ggcgttatag tttggctggc agacaaacaa
    18721 acttgtcagc aagatccaaa acccgtgatg cattccggtt atttgaatga tggcgtagcc
    18781 gaagcacaac accagcgaca ttcttaccgc atgacggaag agggcggatt ccggcgtgaa
    18841 gtgacggcta agacgcagcc agatatcact caacccgtgc gggctgtcat cagcgagctc
    18901 attttcgtca ttattatggg gtagtgcctg ggcctgttct gattcaattg ttgccagttg
    18961 ggcatcaatg gcgcgtaaat tgttcagcaa aaatcccagt gttttgagta aatcggcggg
    19021 tgcgccgtta tcgcgcatcc gctccagcgc agcatcaata tgcgtaaaag cgcgctcaaa
    19081 atgcggatca tgttgataag gctgacgcaa caaaatacag cgtgacagtt gctggcacgc
    19141 ctggccctgc atcgacatca gccgctgaaa acggaacagc acgtcgctgt ggcgaaaatg
    19201 ttcacgcaat gtttgatact gaatatgaga agagctggca cgctcgtgaa tatcctgtgc
    19261 gacaaagtaa taatgcagcg tgcgacgcgt tccccgttga ccacgatcgc cacgtaagcg
    19321 ggtcagcagc gagagtttcg tctgattcaa tgtcgccatc agcagaccgt tggcgagagc
    19381 caaatcgtac agcggtgcct ggctttcatc ttcaatatca ggatcaaaca tgcgcgactt
    19441 gagctcaaga taacgcgcca gttgttcata gcaacgcgcc aggttgtcct gcagcgggcg
    19501 gaccgggaac agcagatgac caataagtgt caggacgttg taccagacgg caccggccag
    19561 cagatacatc ggctgctgat accagtgctc atacagtgat gttcccaaca tagtgtaaat
    19621 ggcgatcagc aatgcaccga aggcaattgt tgcatagcgt tgacccagac cgccgagcaa
    19681 aatgaagccg ctggtagaga gcgttaagcc aatcgcaaat agccagggcc agggaaacag
    19741 caattctact gaggccgagg cgataaaaaa gcagaacagc gtaatgatga ggttacgcaa
    19801 acgtcccgcc agtcggtcat cgagatcggt cagcgccgct gccaccatcc ccagcgttag
    19861 cggaatcgtc agttttacat cacccagcca ccacggaaac gctgtggttc cacaaagcgc
    19921 aataaaaata cgcgcgtaat acagccaggc gctgttccag gtatagcgtt tgagcaaagg
    19981 acttagcata aaggccatat tagtggatta ttcaaaacga cgacgtgcat tggcttcacg
    20041 cgcagcttgc gctgtttcta ccgataccac gcgacgacca accggccata gtgcaatagc
    20101 ggcaatttta aagttcgcaa tgccgacagg aatgccaatg attgaaatac attgtgcgat
    20161 gcccgttgca atgtgcatca ggcataacca ccagccaaag aaaatcagcc agaaaatatt
    20221 caataccgta ccgccagtat tcagcagcac atttttgcca gccgggttca gttcatcgac
    20281 atgaatagct tcattgccat aaggcaccag agacagttta gtgatctccc agcaggatcg
    20341 tgtcagcggt aaggtaaaaa tcagcacaat actgaccaga gtcgccaaca gccagcccag
    20401 agtggtggca aatccgccaa gcacaaagtt cagaatgttc aaaacggtac gcataaaacc
    20461 tcgctttact gtggttttca gtaatgggcg gcaattgtaa cgtttttttg ggctggagca
    20521 cgttttctct gacggttaca ctgataagaa ataatttcgt gtggatctac agagtcatgg
    20581 aactgaaagc gacaacgctt ggaaaacgtc tggcacagca cccttacgat cgggcggtga
    20641 tcctcaatgc cgggattaaa gtctccggcg atcgccacga ataccttatt cctttcaatc
    20701 aattactggc gattcactgt aagcgtggtc tggtatgggg cgagctggaa tttgtactgc
    20761 cggacgaaaa agtggtgcgt ctgcacggca ccgaatgggg cgagacgcag cgtttttacc
    20821 atcatcttga tgctcactgg cggcggtgga gtggcgagat gagcgaaatt gcgtctggtg
    20881 ttttacgcca gcaactggat ttgattgcca cgcgcactgg agaaaataaa tggctgacgc
    20941 gtgagcaaac ctctggcgtt cagcaacaaa tccgccaggc tttgtcggcg ttgccgttgc
    21001 cgttgccggt taaccgactg gaagaattcg ataactgccg tgaggcgtgg cgtaaatgtc
    21061 aggcctggtt gaaagatatt gaaagcgctc ggttgcagca taaccaggcg tataccgaag
    21121 ccatgcttac cgagtatgcg gattttttcc gccaggtcga gtcttcaccg ctgaatccgg
    21181 cgcaggcccg ggcagtcgtt aatggcgagc attctctgtt agtgctggca ggtgcaggaa
    21241 gcggaaaaac gtcggtgctg gtggcccgtg caggctggtt gctggcacgt ggtgaagcgt
    21301 cccctgagca aattttattg ctggcgtttg gtcgcaaagc cgctgaagag atggacgagc
    21361 ggattcgcga acggctacat accgaagaca ttaccgcacg cacgtttcat gcgctggcgc
    21421 tgcatattat tcagcagggc agcaaaaaag ttccgatagt cagcaaactg gaaaatgata
    21481 ccgctgcccg tcatgaactc tttattgctg agtggcgcaa gcaatgcagc gaaaagaaag
    21541 cgcaggcgaa gggctggcgg caatggctga cggaagaaat gcagtggtca gtgccagaag
    21601 gtaacttctg ggatgatgaa aaattacagc gtcgccttgc ctctcgcctc gatcgctggg
    21661 taagtctgat gcggatgcac ggtggtgcac aggcagaaat gattgccagt gcacccgaag
    21721 agattcgcga tctgttcagt aaacgtatca agttgatggc cccgttatta aaagcctgga
    21781 aaggtgcgct gaaggcagaa aacgctgtcg atttttcggg ccttattcat caggcgattg
    21841 tgattctgga gaaaggtcgc tttatcagcc cgtggaagca tattctggtt gatgaatttc
    21901 aggatatctc gccgcagcgg gcagcgttgt tagcggcatt acgcaagcaa aacagtcaga
    21961 cgacgttgtt cgctgttggt gatgactggc aggcgattta ccgattcagc ggtgcgcaaa
    22021 tgtcgctcac caccgctttc catgaaaact ttggtgaagg cgaacgttgt gatttagaca
    22081 cgacttaccg ttttaacagt cgtatcggta aggtggcaaa ccgttttatt cagcagaacc
    22141 caggccagct gaaaaagccg ctaaacagct taaccaatgg agacaaaaaa gccgtcacgt
    22201 tattggatga gagtcaactt gacgctttgc tggataagct ctctggttat gccaaaccgg
    22261 aagagcgcat tctgatcctg gcgcgttacc atcacatgag gcctgccagc ctggaaaaag
    22321 cggcaacacg ctggccgaag ttgcaaatcg actttatgac cattcatgcc agcaaagggc
    22381 aacaggcgga ttacgtcatc atcgttggct tgcaggaggg aagtgatggt tttccggctg
    22441 cggcgcggga gtcgattatg gaagaggcgc tactgccacc ggttgaggat ttcccggacg
    22501 ctgaagaacg gcggttaatg tacgtggcgc tgacccgggc acgccatcgg gtatgggcac
    22561 tgtttaacaa agagaatccc tctccctttg ttgaaatact gaaaaatctg gatgtgccgg
    22621 tggcgagaaa accgtaagaa acaggtggcg tttgccacct gtgcaatatt acttcagacg
    22681 gtccgcgaga taacgctgat aatcggggat cagaatatcg accgcgtcgt tgaaatgcgg
    22741 cgactggatt atgaagtctg ccgttgccac gttggtggcg accggaatgt tccataccgt
    22801 cgccagacgc agcaaggctt tcacgtcagg atcgtgcggc acggcattta gtggatccca
    22861 gaagaaaatc aatacatcaa ttttcccttc tgagatcaat gcgccaacct gctggtcacc
    22921 ccccattggg ccactcaaca tcgcgttgac gttcatgccg gtcgcgcggg aaattaagtt
    22981 accggtagtg cctgttgcat acagtacgtg ttgttccagt aacggttgat gccgttccac
    23041 ccagctcatc agcatttgtt tgcagtgatc gtgtgccacc agcgcaatat gtttccgcgc
    23101 aggtaaagtg cgagtcgtca gttccataat gtacatccgt agtcaacttt cctacagatt
    23161 actgtaagca cttatcgctg caagataaag accgaaaaag cctgcgcaca ggcacaaaaa
    23221 tctcaggaag atggttgttt ttccgcccac tgcaggaaag tatttcgcgt ttgtgggtca
    23281 gccagtttaa accaatactt cagccgttgt tctgtgagca cctgagactg cggtggaata
    23341 gcatccagct cggaaacacc cgaaagcagc gtactgtcat ctgccatcat cgtggcaaat
    23401 tgcggtagtg aagcgcgttt cgcggatttg ttatagcgtt caacctcgac ctcataatca
    23461 atcgtttttg ccgttgaggt aatggcgaga atatccagct ttaccggaat cggcgtcgca
    23521 tcgccatcca acaattcaag gcgcggcgcg gcatcaaaat ggttagcttc ccgctcattc
    23581 tccaggcgag gcaggcgaaa attgacctgg ttgatgagct gggtattaaa actgaccact
    23641 agcggtgggg agatatacag ccgttcttca ctattggaaa gatgaatcgt cttctcaacg
    23701 cgaaacacta actgatgcgg tccattatcc agttcaatgc tgtccgcacc gcgcagcaga
    23761 gagctggaaa ccttcttgcc gtcgagtacc agaagatcga catcggttga aagccgcagc
    23821 gtggtggcaa aaacggatac cggcaaacat aatgcaatca aggtggtcac gatgccggtt
    23881 ttcataggta gctcctgtca aaagaccgcc cgaataataa tgtgtcaaaa tttttcttta
    23941 atcatactta ctaacatata gacatatttc ccgcttttgc tctcattcat tcgtattagc
    24001 tgcatggttg gcatgtcggc tttgtcgtac actttgttaa acagtctgga ggaaataatg
    24061 aaagaaaccg atattgcagg cattttaacg tccactcaca ccattgcgct ggtgggggca
    24121 agcgacaaac ccgatcgtcc cagctatcgc gtgatgaaat atctactcga ccaggggtat
    24181 catgtcattc cggtttcgcc aaaagttgcc ggcaaaacgc tgctgggcca gcaggggtat
    24241 ggcacgctgg cagacgttcc ggaaaaggtc gatatggtcg atgttttccg taattcagaa
    24301 gcggcgtggg gcgtggcaca ggaagctatt gccattggcg cgaaaaccct ctggatgcaa
    24361 ctgggggtga ttaatgagca agcggcagta ctggcacggg atgccgggtt gaatgtggtg
    24421 atggatcgct gcccggctat tgagatccct cgcctgggcc tggccaaata aaaaatcccc
    24481 ggaaggcaaa aaccttccgg ggattcgttc agggatcagt tacgcagacg cggggcctgg
    24541 agttgtttgc ggatggtctg cgccagctca tccatggatg gctgttcagg atgttcatcc
    24601 tgcaattcgc tacttagctg ggcttcagcc aggtaggtat gaaccggtag gccgttatcg
    24661 tcctccatca ctacgtgata ccacggagcg gcgcgaagct cgtcatttac cgccagctca
    24721 tcaggcgacg gttcagagag cgaataaacc gggtcgatat ccacgaccac tccgagataa
    24781 cctaacaggg aatggcggac ctgctggccg ataccgaatt tgctggcaat catagtcacc
    24841 tcccgggaaa tctttacctt tgatataagg gtaaaattcc acatttcaag ttacatgacg
    24901 cgacaggcaa accctttcag atatagccct tccggatagg tagcgatcac cggatgatcg
    24961 gctgcctgac ggaactgctc tataaattgt acatcacggc cggcatcaat tgcggcatcc
    25021 gcgatgattt tctgaaataa atcgctggtc atcagaccgg aacaggagaa agtcaggaga
    25081 ataccgcctt cattcagcaa ctgaatcgcc agcatgttga tatctttata gccacgacac
    25141 gcgcccatca actggctttt attctcaaca aacttcggcg ggtccatcac gataacgtca
    25201 aatttttcac cgcgatcgcg ataagtacgc agcaatttaa agacatcatc acggacaaac
    25261 tcagccttgc tcagatccag tttgttcagc tcaacgttct gccgtgcaat atccagcgct
    25321 tcctgggagg tatcaacgct gacaacctgg ctgcaaccgc ccatcagtgc cgatacggcg
    25381 aaaccaccgg tataggagaa acagttcagc acacgtttat tttcaacgta gcggcgggta
    25441 gccaggcggc tgtctcgctg gtccaggtag tagcccgttt tgtgtccgtg ctgaatatcc
    25501 accagcagct tcatgccgtg ttcttcaatc ggcagcaggg caggcggcaa ctcgccggtg
    25561 acgaggccca gggtcagctc catcccttct tttttacgta ccgcaacatc gctgcgatcg
    25621 taaatcgcac attccgggta cagcgtttgc agggcactaa ctaatgccgc gcgctgatat
    25681 tctgccccag cactcagcag ttgcagcacc agaaaattac cgaaacgatc gatagtaata
    25741 cccggcaggc catcagattc tccggcgatt aaacgatagc tgtcgaggcc atctttttgc
    25801 gccagccagt cacgccattt ttgtgcttgt tgcaaacggc gggaaaaaaa agcaatgtcg
    25861 atagactcag acgggtcaaa cgtccagacg cgcgcccgga tttgcgaagc tggcgaataa
    25921 gcgccgcgtg ctaaccattt tccctgatga tcaacaatat cgatggtttc accgaggctg
    25981 gctttacctt ccatgcgggc aacggccccg gaaaagaccc acggatggcg acgaagtaat
    26041 gatttttcgc gccctttggc taacactaaa cgtacactca taatttactt ttctgtcgat
    26101 gcaaagaaat gggcgtcatt gtccggagtt ttccatggat ttgcaacgcg tccattaagg
    26161 ataaggagag cagcaatgtc gaaagtctgc ataattgcct gggtttacgg gcgagttcag
    26221 ggcgtaggat ttcgctacac cacacagtac gaagcgaaaa gactgggttt aaccgggtac
    26281 gccaaaaatc ttgacgatgg cagcgtggaa gtggttgcct gcggtgaaga agggcaggtg
    26341 gaaaaattaa tgcagtggtt aaagagtggc ggcccgcgtt ctgcgcgtgt agaacgggtg
    26401 ctcagcgagc cgcatcatcc ctcgggggaa ttaaccgatt ttcgtatccg ttaaatacat
    26461 tttaccggtt ttggcaggcc agcaattttg gtggcttgct tagccggacc tttcggaaac
    26521 agtcggtata aatagcggct gttacctttt tcttcgccaa atttattcgc catcgctttt
    26581 accagcatac gaatcgccgg agaagtattg aattccagat agaaatcacg cacaaaacgc
    26641 accacttccc agtgttccgg tgacagcgaa atcccttcgt tctctgcaat caccactgcc
    26701 agcggctcac tccactggct gctttctttg agatagcctt cggtatccgt ttctatctct
    26761 ttaccttcga agatcagcat aattattact accttaatca gactggcggc agtgtaacaa
    26821 aaaacaaagc cccgcataaa gcgaggctat gaaagtgtta gcgggtgaga ttaatcgcgg
    26881 ctggcgaagc ccagaatgct cagcaggctg acgaagatgt tgtacagcga aacatacagg
    26941 ctaaccgtgg cacgaatata gttcgtttca ccgccatgaa cgatgttgct ggtttcaaac
    27001 aaaatagcgc cagaggagat caaaatgaag accgcgctga tcgccagatg cagagcaggc
    27061 agctgcagga agatattagc aaccatacca atcagcacca ccacaatacc cgccatcagc
    27121 ataccgccga ggaacgacat atctttgcgg gtggtcagca catatgcaga gcagcagaag
    27181 aacactaacg ccgttccgcc cagagccata gcgattacgt cacccattcc ggcagacaga
    27241 taggtgttca gaataggtcc gaggatataa cccagaaaac cggtaaaggc gaatgcggag
    27301 ataatcccgg tcggcttatt cgccgtttta taggtcagga acatcaaacc atacataccc
    27361 accagcgtca gaatcagacc cggagatggc agcatcagca ccgtactggc agttgcggta
    27421 atcgccgaaa aggccagcgt caggctcagc agaaaatagg tattacgcag caccttatgg
    27481 gtgctaagca gtgatgtacg gtcatgtgaa gaactaacaa tacgatccat tgagtcactc
    27541 tctatgacag atgtaattaa ttaagcagca taatgataat gcgtaagggc acccagaagt
    27601 tttacccatc tttacgcatt tgatctggaa caggtttaac agcggattat caggtcatta
    27661 agcaaatata acgccctgag aatttcgaca ggcaaaagaa aaaggggtta gcatttagct
    27721 aaccccttat cttatttggc ggaagcgcag agattcgaac tctggaaccc tttcgggtcg
    27781 ccggttttca agaccggtgc cttcaaccgc tcggccacac ttccggaatg acgcgcacta
    27841 taaacatccc gatgcggcgt gtaaacccct aatttgtttg tttgcctgaa aaacagccaa
    27901 aagtgcattg atagcgtgaa ataacagcag attgatcatt tcatcaccat gaattccttc
    27961 tcttttactc gtttagcaac cggctaaaca tccccaccgc ccggcaaaaa gaaaaatagg
    28021 tccattttta tcgctaaaag ataaatccac acagtttgta ttgttttgtg caaaagtttc
    28081 actacgcttt attaacaata ctttctggcg acgtgcgcca gtgcagaagg atgagctttc
    28141 gttttcagca tctcacgtga agcgatggtt tgccttgcta cagggacgtc gcttgccgac
    28201 cataagcgcc cggtgtcctg ccggtgtcgc aaggagaaga gacgtgcgat atgaataacg
    28261 aggaaacatt ttaccaggcc atgcggcgtc agggcgttac ccggcgcagc tttctcaaat
    28321 attgtagtct ggctgccacg tcgctgggat taggcgcggg aatggcacca aagattgcct
    28381 gggcgctgga gaacaaaccc cgcattccgg tagtatggat ccacggtctg gaatgcacct
    28441 gctgtaccga atcttttatc cgctccgctc acccactggc gaaggacgtc atcctttccc
    28501 tgatttccct cgattatgac gatactttga tggctgccgc cggaacccag gcggaagaag
    28561 tcttcgaaga catcatcacg caatacaatg gcaaatatat cctcgcagta gaaggtaatc
    28621 cgccgctggg cgagcagggg atgttctgta tcagcagcgg tcgaccgttt attgagaaac
    28681 tcaaacgtgc cgctgccgga gccagcgcga ttatcgcctg gggaacctgc gcgtcctggg
    28741 gctgcgtgca ggccgcgcgg cccaatccga cgcaggcaac gcctatcgac aaagtcatca
    28801 ccgacaaacc cattatcaaa gtacctggct gcccgccgat cccggatgtg atgagcgcca
    28861 tcattactta catggtgacc tttgatcgct tgccagatgt cgacagaatg ggccgtccgc
    28921 tgatgttcta tggtcagcga atccacgata aatgctatcg ccgcgcccac ttcgacgccg
    28981 gagagttcgt ccagagttgg gatgatgacg ctgcccgcaa aggttactgc ctgtacaaaa
    29041 tgggctgcaa agggcctacc acctataacg cctgttcctc cacacgctgg aatgatggcg
    29101 tttctttccc aatccagtct ggtcacggct gcctgggctg tgcggaaaat ggtttctggg
    29161 atcgcggttc gttctacagc cgcgtggtcg atattccgca aatgggtact cattccaccg
    29221 ccgataccgt cggtttaacc gcgcttggcg tggtggcagc ggctgttggt gtgcacgcag
    29281 tcgccagcgc cgttgaccag cgcagacgtc ataaccagca acctacagaa accgaacatc
    29341 agccaggcaa tgaggataaa caggcatgag cactcagtac gaaactcagg gatacaccat
    29401 caataatgcc ggacgccgcc tggtggtcga cccgattacg cgcatcgaag gccacatgcg
    29461 ctgcgaagtg aatattaacg atcagaatgt gatcaccaat gccgtctcct gcggcaccat
    29521 gtttcgcggg ctggagatca tcctacaagg gcgcgacccg cgcgatgcgt gggcgttcgt
    29581 tgaacgtatc tgcggcgtct gtactggcgt acacgccctg gcttcggttt acgccatcga
    29641 agatgctatc ggtattaaag tgccggacaa cgccaatatc atccgcaaca ttatgctggc
    29701 aacgctctgg tgccacgatc atctggtgca cttctatcag cttgccggga tggactggat
    29761 cgatgtgtta gatgcgctga aagccgaccc gcggaaaacc tccgaactgg cgcaaagtct
    29821 ctcctcttgg ccgaaatcat cccctggcta tttcttcgac gtacaaaacc gcctgaaaaa
    29881 atttgttgaa ggcgggcagt tggggatctt ccgcaatggc tactgggggc acccgcagta
    29941 caaactgccg ccagaagcta acctgatggg ctttgcccac tatctcgaag ctctcgattt
    30001 ccagcgtgaa attgtcaaaa tccacgcggt ctttggcggt aaaaacccgc atccaaactg
    30061 gattgtcggc gggatgcctt gcgccatcaa cattgacgaa agcggcgcgg tcggggcagt
    30121 caatatggaa cgcctgaacc tggtgcagtc aattatcacc cgcacggcgg acttcattaa
    30181 caacgtgatg atccccgacg ccttagccat cggtcagttc aacaaaccgt ggagcgaaat
    30241 cggcactggt ctttctgata aatgcgttct cagctacggc gcattcccgg atattgccaa
    30301 cgactttggc gagaaaagtc tgctgatgcc tggcggcgcg gtgattaacg gcgacttcaa
    30361 caatgtgctg ccagtggatt tggttgatcc gcagcaggtg caggagtttg tcgaccacgc
    30421 ctggtatcga tatcccaacg atcaggtcgg gcgtcatccg ttcgatggca tcaccgaccc
    30481 gtggtacaac cccggcgatg tcaaaggcag cgataccaac attcagcagc tgaatgaaca
    30541 ggaacgctac tcgtggatca aagcgccacg ctggcgcggt aacgcgatgg aagtggggcc
    30601 gctggcgcgc acgttaatcg cttatcacaa aggcgatgct gcgaccgttg agtcggtcga
    30661 tcgcatgatg tcggcgttga acctgccgct ttccggtatc cagtcaacgt taggccgcat
    30721 tttgtgccgc gcgcacgaag cgcagtgggc cgcaggtaag ttgcagtatt tcttcgacaa
    30781 gctgatgacc aacctgaaaa acggcaatct cgccactgct tccacggaaa aatgggaacc
    30841 tgcaacctgg ccgacagagt gccgtggtgt cggttttacc gaagcgccgc gcggggcgtt
    30901 aggccactgg gccgccattc gcgatggcaa gattgatctc taccagtgcg tggtgccgac
    30961 cacctggaac gccagcccgc gcgatcccaa agggcagatt ggcgcttatg aagcggcgct
    31021 gatgaacacc aaaatggcga tccccgagca accgctggag atcctgcgta ctctgcacag
    31081 ctttgacccg tgcctcgcct gttcaacaca cgtgctgggc gacgacggta gcgagctgat
    31141 ctccgtgcag gtgcgttaac agcgaaggag aatcatcatg caacagaaaa gcgacaacgt
    31201 tgtcagccac tatgtctttg aagcgccagt ccgcatctgg cactggttga cggtgttatg
    31261 catggcggtg ttgatggtca ccggatactt tatcggcaag ccgctacctt ccgtcagcgg
    31321 cgaggcgacg tatctgttct atatgggcta catcaggtta attcacttca gcgccgggat
    31381 ggtttttacc gtggttttgc tgatgcggat ctactgggct tttgttggca atcgatactc
    31441 ccgcgagctg tttatcgtgc cggtatggcg taaaagctgg tggcagggcg tgtggtatga
    31501 aatccgctgg tatctgtttc tggcaaaacg tccgagtgcc gatataggcc ataatcccat
    31561 cgcccaggcg gcgatgttcg gctatttcct gatgtcggtc tttatgatca tcactggttt
    31621 tgcgctgtac agcgaacaca gccagtacgc tatttttgcg ccgttccgtt atgtggtgga
    31681 atttttctac tggacgggtg gcaactcaat ggacattcac agctggcatc ggctggggat
    31741 gtggctgatt ggcgcgtttg tgatcggtca tgtctacatg gcgctgcgtg aagacatcat
    31801 gtccgacggc acggtgatct ccaccatggt caacggctac cgtagccaca aatttggcaa
    31861 aataagtaac aaggagtgtt catgagcgag caacgcgtgg tggtcatggg gctgggcaac
    31921 ctgctgtggg ccgatgaagg cttcggcgtg cgggtggcgg aacggctgta tgcccattac
    31981 cactggcccg agtatgtgga gattgtcgat ggcggtactc agggactgaa cttgctgggg
    32041 tatgtcgaaa gcgccagcca tctgttgatt ctcgatgcca ttgactacgg gctggaacct
    32101 ggaacgctgc gaacctatgc cggagaacgc attccggctt atctcagcgc gaagaaaatg
    32161 agcctgcatc agaacagttt ctccgaagtg ctggcgctgg cagatatccg cggacatctg
    32221 ccagcacata ttgccctcgt cgggctgcaa cccgcgatgc tcgacgacta cggcggcagc
    32281 ctgagcgaac tggcacggga gcaactgctc gctgcggaac aatcggcgct ggcgcagttg
    32341 gctgcgtggg gaagtgtgcc gcaactggct aatgaatcgc gttgtctcaa ttatgactgt
    32401 ctgtcgatgg aaaattacga aggcgttcgc ttgcgccagt accggatgac acaggaggag
    32461 cagggatgag caacgacacg ccatttgatg cgttgtggca acgaatgctg gcgcgcggct
    32521 ggacgccggt cagtgaatcc cgtcttgacg actggcttac gcaagcgcca gacggcgtgg
    32581 tgttattaag cagtgacccg aaacgcacgc cagaggtcag cgataatccg gtaatgattg
    32641 gcgaattact gcacgagttt cccgactata catggcaggt ggcgattgct gaccttgagc
    32701 agagcgaagc catcggcgat cgctttggcg tctttcgctt tcctaccact ttagtgttta
    32761 ccggcggaaa ctatcgcggc gtgctgaatg gtattcaccc gtgggcggaa ctgataaacc
    32821 tgatgcgcgg gcttgtcgaa ccgcagcagg agcgtgcctc atgagcgaaa cttttttcca
    32881 tctgctgggg ccaggaacgc aaccgaacga tgacagtttc agcatgaatc cactgccgat
    32941 cacctgtcag gtgaatgatg aaccgagtat ggcggccctg gagcaatgtg ctcacagccc
    33001 gcaggtgatt gcgctgttaa acgagttaca acatcaacta agcgaacgcc agccgccgtt
    33061 gggcgaggtg ctggcagtcg atctgttaaa tctcaacgcc gacgatcgtc actttatcaa
    33121 tacgcttctc ggggaagggg aagtgtcagt gcgcattcag caggctgacg acagtaaaag
    33181 tgaaatacag gaggcgatct tctgcggatt atggcgggtg cgcagacgtc gcggcgaaaa
    33241 gttgctggag gacaaactgg aggctggctg cgcgccgctg gcgttgtggc aggcggcaac
    33301 gcaaaatctc ttgccgacag attcgctgtt accgccgccc attgatggcc tgatgaatgg
    33361 cctaccgttg gcgcatgagt tactggcaca tgtacgtaac cccgacgcgc agccgcacag
    33421 cattaatctg acgcaattac ccatcagcga ggctgatcgg ctttttctct cacgtctctg
    33481 tgggccggga aatattcaga ttcgtaccat tggctatggc gagagctata tcaacgccac
    33541 ggggttacgc catgtctggc atttacgctg tacggacacc ttaaaaggcc cgttactgga
    33601 aagttatgaa atctgcccaa taccggaagt ggtgctggca gcgccagaag atttggtcga
    33661 ctctgcgcag cggcttagcg aggtatgtca gtggctggcg gaagctgcac cgacgtaaaa
    33721 agacggtaag tatcgctttc agtcttatga atatcgcaat cggcgaatac ctctggtcgt
    33781 agagtttcag gataaagagg gagatctaac attatcgggt tatttttctc tcttcgccta
    33841 caggagtgcg catgtgggat gtcattgatt tatcgcgctg gcagtttgct ctgaccgcgc
    33901 tgtatcactt tttatttgta ccccttaccc tggggctgat ttttttgctg gctatcatgg
    33961 aaaccattta cgtggtcacc ggcaaaacaa tctaccgcga tatgacgcgc ttctggggta
    34021 agctcttcgg tatcaatttt gctcttggcg tggctaccgg cctgaccatg gagtttcagt
    34081 ttggtactaa ctgggcattc tattccaact atgtgggcga tatttttggc gcaccgctgg
    34141 cgatggaagc attaatggcc ttcttcctcg aatccacctt tgtcgggctt ttcttcttcg
    34201 gctggcagcg gctgaataaa taccagcacc tgctggtgac gtggctggtg gcgttcggtt
    34261 caaatctctc tgcattgtgg atattgaatg ccaacggttg gatgcaatac ccgaccggtg
    34321 cgcattttga tatcgacacc ctacgtatgg agatgaccag cttcagcgag ctggtcttta
    34381 acccggtcag ccaggtgaaa tttgtgcaca ccgtaatggc gggctacgtg accggggcca
    34441 tgtttattat ggcgatcagc gcctggtatt tactgcgcgg acgggagcgc gatgttgcat
    34501 tacgctcgtt tgccatcggt tccgtcttcg gtactctggc gattatcggc acgctacaac
    34561 tcggggacag ttctgcgtat gaagtcgcgc aagtacaacc ggtaaaactg gcggcgatgg
    34621 aaggggagtg gcaaacggaa cctgctcctg caccgttcca tgtggttgcc tggccggaac
    34681 aggatcaaga gcgtaacgcc tttgccatca aaattcccgc gctgttaggg atcctcgcca
    34741 ctcactcatt agataaaccc gtgccgggtc tgaagaattt gatggctgaa acctacccac
    34801 gcttgcaacg cggacgtatg gcctggctgt taatgcagga aatatcgcaa ggcaatcgtg
    34861 agccgcatgt gttgcaggca ttccgggaac tggaaggtga cctgggctac ggcatgttgc
    34921 tctcccgcta tgcgccggat atgaatcatg tcacagccgc acagtaccag gcggcgatgc
    34981 gtggcgcgat acctcaggtt gcgccggtat tctggagttt ccgcatcatg gtgggctgtg
    35041 gttccctgct gctactggtg atgctgattg cgcttgtcca gacgctgcgt ggcaaaatcg
    35101 accagcatcg ctgggtgctg aaaatggcgc tctggagttt gccgttgccg tggattgcga
    35161 ttgaagccgg gtggtttatg accgagtttg gtcgtcagcc gtgggcgata caggacatct
    35221 taccgacata ctccgcgcac tccgctttaa ccacaggaca actggctttc tcactgatca
    35281 tgatcgtagg gctttacacc ctgttcttaa tcgccgaagt ctacctgatg cagaaatatg
    35341 cccgtctggg gccgagcgcg atgcagagtg aacaaccgac gcagcaacag gggtaaagga
    35401 gaaaatcatg tttgattatg aaacattgcg cttcatctgg tggctgctga ttggcgtgat
    35461 cctggtggtc tttatgatct ccgacggatt tgacatgggg atcggctgtc tgctgccgct
    35521 ggtggcgcgt aatgatgatg aacgccggat agtgataaac agcgttggtg cacactggga
    35581 aggcaaccag gtctggttga tcctcgctgg tggggcatta tttgccgcct ggcccagagt
    35641 gtatgcagcg gcgttttccg gcttttatgt ggcgatgatc ctggtgctgt gctcactgtt
    35701 cttccgcccg ctggcctttg attatcgcgg aaaaatcgcc gatgtacgct ggcgtaaaat
    35761 gtgggacgcc ggtctggtca tcggcagtct ggtgccgccg gtagtcttcg gtatcgcctt
    35821 cggcaacttg ttgctcggcg tgccgtttgc cttcacaccg caattacgcg tggagtatct
    35881 cggcagcttc tggcaactgc tgacgccatt ccctttattg tgcggattgc tcagccttgg
    35941 gatggtaatt ttgcaaggtg gcgtctggtt acaactgaaa actgttggtg tgattcatct
    36001 gagttcacag ctggccacca aacgcgctgc actgttggtg atgctgtgct ttttgctggc
    36061 gggttactgg ctgtgggtcg gtattgatgg ctttgtactg ctcgcccagg atgctaacgg
    36121 tccttccaat ccgttaatga aactggtggc agtgctacct ggtgcctgga tgaataattt
    36181 cgtcgaatcg cccgttttgt ggatcttccc gctgctgggg ttcttctgcc cattgctgac
    36241 ggtgatggcg atttatcgtg gtcgcccagg ttggggattt ttaatggcgt cattgatgca
    36301 atttggcgtg attttcacgg caggcatcac gctgttcccc ttcgtcatgc cgtcaagcgt
    36361 gagtccgatc tccagcctga cgttgtggga cagcacttcc agccagctga cgctgagcat
    36421 tatgttggta atcgtgctga tatttttgcc cattgtgttg ctctacactc tctggagcta
    36481 ctacaaaatg tgggggcgca tgacaacaga aactctccgc cgtaacgaaa acgagttgta
    36541 ctaaggagca ggaacaatgt ggtatttact ttggttcgtc ggcattttgt tgatgtgttc
    36601 gctctccacc cttgtgttgg tatggctgga cccgcgtctg aaaagttaac gaacgtaggc
    36661 ctgatgcggc gcattagcat cgcatcaggc aatcaataat gtcagatatg aaaagcggaa
    36721 acatatcgat gaaagcgatc ttaatcccat ttttatctct tctgattccg ttaacctcgc
    36781 aatctgcatt cgctcagagt gagccggagc tgaagctgga aagtgtggtg attgtcagtc
    36841 gtcatggtgt gcgtgctcca accaaggcca cgcaactgat gcaggatgtc accccagacg
    36901 catggccaac ctggccggta aaactgggtt ggctgacacc gcgcggtggt gagctaatcg
    36961 cctatttcgg acattaccaa cgccagcgtc tggtggccga cggattgctg gcaaaaaagg
    37021 gctgtccgca gcctggtcag gtcgcgatta ttgctgatgt cgacgagcgt acccgtaaaa
    37081 caggcgaagc cttcgccgcc gggctggcac ctgactgtgc aataaccgta catacccagg
    37141 cagatacgtc cagtcccgat ccgttattta atcctctaaa aactggcgtt tgccaactgg
    37201 ataatgtgaa cgtgactgac gcgatcctca gcagggcagg agggtcaatt gctgacttta
    37261 ccgggcatcg gcaaacggcg tttcgcgaac tggaacgggt gcttaatttt ccgcaatcaa
    37321 acttgtgcct taaacgtgag aaacaggacg aaagctgttc attaacgcag gcattaccat
    37381 cggaactcaa ggtgagcgcc gacaatgtct cattaaccgg tgcggtaagc ctcgcatcaa
    37441 tgctgacgga gatatttctc ctgcaacaag cacagggaat gccagagccg gggtggggaa
    37501 ggatcaccga ttcacaccag tggaacacct tgctaagttt gcataacgcg caattttatt
    37561 tgctacaacg cacgccagag gttgcccgca gccgcgccac cccgttattg gatttgatca
    37621 tggcagcgtt gacgccccat ccaccgcaaa aacaggcgta tggtgtgaca ttacccactt
    37681 cagtactgtt tattgccgga cacgatacta atctggcaaa tctcggcggc gcactggagc
    37741 tcaactggac gcttcccggt cagccggata acacgccgcc aggtggtgaa ctggtgtttg
    37801 aacgctggcg tcggctaagc gataacagcc agtggattca ggtttcgctg gtcttccaga
    37861 ctttacagca gatgcgtgat aaaacgccgc tgtcattaaa tacgccgccc ggagaggtga
    37921 aactgaccct ggcaggatgt gaagagcgaa atgcgcaggg catgtgttcg ttggcaggtt
    37981 ttacgcaaat cgtgaatgaa gcacgcatac cggcgtgcag tttgtaatgc ataaaaaaga
    38041 gcattcagtt acctgaatgc tctgaggctg atgacaaacg aagaactgtc taatgcgtag
    38101 accggaaaag gcgttcacgc cgcatccggc cactttcagt tttactcttt ctcggagtaa
    38161 ctataaccgt aatagttata gccgtaactg taagcggtgc tggcgcgttt aatcacacca
    38221 ttgaggatag cgcctttaat attgacgcct gcctgttcca gacgctgcat tgacaaactc
    38281 acctctttgg cggtgttcaa gccaaaacgc gcaaccagca ggctggtgcc aacagaacgc
    38341 cccacgaccg cggcatcact caccgccagc atcggcggcg tatcgacaat caccagatcg
    38401 taatggtcgt tcgcccattc cagtaattga cgcatccgat cgcgcatcag cagttcagac
    38461 gggttaggtg gcacctgacc gcgagtaatc acatcaaagc ctcctttgcc aaaatgctgg
    38521 atcactttgt tgagctcatc tttacctgcc agatattccg acaagccatg ttcattactc
    38581 acggtaaaca ggttatgcga ataaccacgg cgtaagtcgg catcaataaa taacactttt
    38641 tgatcggact gggcgatcac cgctgccaga gttgaactga caaacgtttt accactgtct
    38701 ggcgtcgcac cggtgatcat cagaatgtta ttctccgtct ccatcatagc gaagtgcaga
    38761 ctggttcgta gcgcacgtac ggcttccaca gcagaatccg ccgggttatc caccgccagg
    38821 aaggggatat ttttagtacg atggcgctgc tgattagaaa ataaattttt cttacgcaga
    38881 cgggtacgtt tatccagcca ctcggacatt gggatagtgg cataaacgct gatgccgtgc
    38941 tcttccagtt gttccggggc ttctacacca cgacgcaaca tcgcacgcgc cagcacggca
    39001 cccaccgaaa taaacaggcc aagaataaaa ccaagcacca cgttcaacgc ttttttcggt
    39061 ttcactggct gcggctgagt gactgctggg tcgataatcc gcacgttacc aatggcactg
    39121 gatttcgaaa tactcaactc ctgctggcgg ttaagtaatt gcagatatac cgcacggccc
    39181 gcttctacgt cacggcttaa acgtaacact tcctgttgag tggaaggcat tgccgatacc
    39241 cgcttattca ggcgtttgcg ttcttgctcc agcgtctggc gtttttccag cagcgcacga
    39301 taagttgggt gatctttctt atacagctgg gagatctctg cctcgcggaa agtcagctca
    39361 ttgagttgat tatcaacgtt cacaatctgc tcaagaacgg ctttggcttc taggttaagg
    39421 tcaaccgaat cgcgctgctg gcgataaacg ttgagttttt cttccgcctg gtccagctcg
    39481 ctgcgcactt caggcaactg gcgctgtaag aattcaaggc tttgtgaatc ctgcgccgcc
    39541 tggcgagcga tattctgttg caaatagttg ttagcgatgc tgttcagaat acgagtaatc
    39601 aactggggat catcaccagt catggtaagt tccagcatcc cgctttcttt actgcgttcg
    39661 ctaacggtaa aggtttcctg caatgcgtta atcgcttcca gttcggtacg ctggctcagg
    39721 acaaactgtg ttcctggttt ggccttaatg tccgcgatag tcagcgcaac gccatctttt
    39781 tccagacgct ggccgaccat accattgacg gtgaactctt caccttccag tgtatagtgg
    39841 ccgttttccc caaccgtgag tgtcagttgc tgatcctgac cattcagttg tggaatatgc
    39901 atccagctga tcgccagctc acctggtttt tctttggtta atctcgccca gccgcgaccc
    39961 acaatcggaa aatacttctg ctcaactatg tcgtgcagat tcagttcagc aatggtttta
    40021 ccgagaatca tgcgcgattg cagcagttgg atctccggtg cagactcggg cgatgagtta
    40081 gggatcatat cgctcaggcc gctgagaatg gcgttgccct gtttttgctc aacctggacc
    40141 agagtatctg cctgataaat tggtgtgctt aacagcgagt aagcgacagc gatcagcgtg
    40201 aataacgcgg ttacgctgat aataaactta cggtgatccc ataactcgcc gaccagacga
    40261 agcagatcga tctcattttc ctgagtgctg cctggtggcg tattcatatt tttagttgtc
    40321 atcgtatttt ataaactcaa attaccggct gaggcgcttc gcccattcct gactggcgcg
    40381 ctccaacata ccgtagacat gttcaaatgc gtcctgactt ttacgatagg gatccgggat
    40441 ctctttctgt tccagccatt gcccaaacag cattgtcttc ccgcggacct cgggagcgat
    40501 tgcggtaacc tgagcaatat gctctgactc cattgccaga atcagatcgt aatttcgtgc
    40561 catctcagca gtgagcttac gtccggcatg tccttcaaga gatacgccat gattagcggc
    40621 aacatctgct gctgtcgcat ctgcagggtg ttttaccaga ccatgaacac ctgccgattt
    40681 gacttttacg cctggcagac gtttacgcag caagcgctcg ccaatgggcg aacggcaaat
    40741 gttgccggta caaaccacca ggattgagtt aaattttagt tgggccatgt ttgaatccac
    40801 cgtgaagtct ctgtcaggtc atgcaccccg gaaatcgtcg gtaccagcag agaaatcaca
    40861 cggttccaac gagccagcgg cgcggtagtg acataaacaa tgtcgtaagg ttcaagctgg
    40921 aattccgttc cgagtatcat tgccgatgcg tccttcgcat tcagctgata aatattggcg
    40981 attttgccat tctgcttgtt ttgcgttgca cgaataacaa aaatccccgt cgcatcagcg
    41041 acatcctgat tcataccctc agcgttaccc agcgcttccg ccagggtcat accgctgcgg
    41101 tccattttca gcgtgctctg tttacccact tcacccatca cgaagacttt cagatcatcg
    41161 ttgcgcggaa taaataaaat atcgcccggg tgcagcagtt tgttctggcg caagtcgcca
    41221 cgctgcatca gcgcatagag gttcactttg gtctttacgc cattctgggt gagcaccacg
    41281 ttgcgccagt ctgcatctgc ggtcagaccg cccgcggcgt taatcgcatc catgatggtc
    41341 agaggaatat tggtaatcgg ctgctgaccc gatttgctga cttcgccggt gacgtacgct
    41401 ttttgcgatc ggaacgccgc gacgctgaca tcgacttgcg ggctttcaat gactgaatcg
    41461 agacgcgctg taatctcgtt gcgtacctgg gtaagtgttt tcccggccac tttcaggcga
    41521 ccaatatagg ggtagaaaat cgcaccatcg gcgttaaccc agttgccggt atcactggcg
    41581 ctacggtatt gccctgcggg ggtggttagt tccgggtgat cccagaccgt aaccatcaac
    41641 acatcaccaa tcccgatacg atattcatag tttgcgattt gctgctccag ctccgggtta
    41701 gcctgcgaca taatcggttt ggcgcgcaac tgatcaatca atcctggcgt gacgggatag
    41761 atattgacca ttttgtccag gtcatactga ttgtcaggta gttcaatgac atccttgttc
    41821 ctggtcgata aattctgacc aggaacaagg gtacatgctg tcaaagacag aacagccaat
    41881 gtcagtaccg aaaacttaaa aatgttcttt ttcattggtt tatatttatc agtcaatgta
    41941 atgttatgaa ttacgtcagg ttattgtcca accggtactt ctcgctctgc cgtcattgga
    42001 tagagctggt atttgcgtga cagcatttgt ccaccatcac gcgtcaatgg tgtccacgaa
    42061 accaccgcgc ggttgcggtt aggtccaatg gtcatcaagt cgaatggaat cgagatataa
    42121 aaacctttac taaagccgcc ttcgccgtag tcatctttag atacgttact gattgccgcc
    42181 cataccccta ccgccacgcc gctgtcaaag cgtttggcga cgtcgatcgt tgctccttta
    42241 tcttttgcca gatattgccc aacgctaagt ttcatcagta cgccattgag cgtcggcggg
    42301 ttccagtaag ccgtcacgaa accagttggc gtggaataat cggtgaagcg catcatgttg
    42361 tcccagtcac gttgcttcac gtagttaacg tccacaccca gcgcccagct ggcatctagc
    42421 gggcgataaa gcagctcgga accgacaccg gcgtacatcg tttccagata accgccatac
    42481 acctggccat agaaaccatt gcctaagtcg gcaaagtagt tcgcctgcaa gttgttgaga
    42541 taaacgtcat tgcgaacgta atcacggata tgcgtgcgca cgcggggcag ggtagagtcc
    42601 gcgggcaaca gcgaagactt aaacttgtcg tagttgttgt aaatattggt gaaaataccg
    42661 ccatcaagca gcaggtggtc ggtaaaccag tagcgggcac tggacatcag ccccagctgg
    42721 aacatataga aatcttccgg gccgcccagc gactgtgaaa gtgttgggtt gaaagagtag
    42781 ctaaagcgat cttcacgaat acggtagccc cgaccaaagg cagaaagatc ttctgcttca
    42841 acacgttgtt gttgaagttg ctctgattga ccaggcgctg taccagccag ctgtttgcgc
    42901 aggctggcta cgtcggtttc ggtagtcacc atcgccatat gctcgcgctt ttgcgtcacg
    42961 ctaatcttct caacgccttg cggcaggtta ttcaccagaa tccggttggc acgatcgacc
    43021 gcttcgcgag aatcacggta tttgtattgt tgaccagaca tatacagcgt cttatcgcgc
    43081 agctgaattt ccggtgcttc aaaacctgcg ttgtacttca gcgcggtaag ttggttcgct
    43141 actgtggtgt actgcaatcc ttcagattca ggcgcaggtt gatatgccgg ttttggcgta
    43201 tcgcgcaggg cagggcgcag atcgttgaaa ttggtccgta acgtgaagcc aaacatcaac
    43261 gtgttaccgc gttcataact caggttgaga tctgcccagc tggcagcgcg ataaactgcg
    43321 ccgacgttga aatggcttgc ctgaggcagt ttgccagcga aatcattctg gtaattgttg
    43381 ccatcgtatt cgagtttcag acgcagggga ttccacggcg tttgatactc aatgccgcca
    43441 aagatggaag ccgggccacg aaagatatcg ctaaagctga tatcgcccgc atcgtgagac
    43501 tctgcgcgat gacaatattt atcgttcacc cggcaaaacg ggttggtaat attgcccgca
    43561 ttaccggcgt agccccatgc catcccgagg gtgaaatcaa atggccccgc ttgcttgctg
    43621 gccaccagat actcaccgtc aaacagaccc gtaccagcaa tatcacgttt accaaacgcc
    43681 acttgcggta gccagtaacc ttcttcccac aggcgaagtt taaaatcgaa tgatttgtct
    43741 ttgtatgact gatcgccgct gaaatcttcc cactggctat atttgcgtgt gcgcacatcc
    43801 gtataacgaa tggtgccttc cagccatggg aacagcgcca cggaggtgga gtagaaccgg
    43861 tattgatcgt tatcccggta gttgacgctg aattcacctt ccggtgcgat gcgcgcattt
    43921 ggcatctgca acaatcctgt gccgccaaag tctgattgcg acgaacccag cggatccggg
    43981 taggttaata cttcagcatg acaggcactg gagacggcaa tggccaggca gcttaaaaga
    44041 taagaattct tcttcatcag tcaggaacac gttgcgttaa aacagacaca atctggtcat
    44101 ttaaatcagc atatttttcg ggcagtacat gcgcagaaaa gcccaaccaa agctggctgc
    44161 caggcggtgg ttccacatgt cttttattcc acagggcaac aggggcgacg acagtctcac
    44221 cctcaggcgt aatcaccata acgttattct tgtccgcgcc tgcaaggcgg gggtgatctt
    44281 gcagataatc ggtaacgcta cggcctgcct gccagggcaa ttgcccggcc ccagaaaccg
    44341 cacccagcag agtaatagtc accggacgct gtacggtata gagcgtatag tccccgacca
    44401 acgggggatt gctgttctca tccactcgaa caaaatcagg gtccagtttg accggtaagc
    44461 gaccagtgat attgagattg agtaactgct ggcgcacaga tttaatcgtt gccgccacat
    44521 cgtcgtcagc ttctgcttcc caggaagcaa gctgtgccat gacatgttgg tagtctttaa
    44581 gcgctttagc tttcgccgca gagtcggtca gcaaggcacc aggccaccag aggcgatcgc
    44641 gcagttgcgg ttgtgtcacc aactggacaa cattttccat ggggccaacg gaaagtgtct
    44701 gttgttcgcc aggcagataa atagtcaccg ttccttgcgc aaaggcatgg ggtgtcatta
    44761 cgtaaagtac gctggcaatg aaatacgact gtaatttatt catggtgcgg gtttaagaaa
    44821 cgtcatttct acgggaataa cccctgcgcc taacatttgc cgactttgac gaacctggcc
    44881 agtagccgaa tcgacccaga atgtgttttg ccactgtttt tctggccgcg tggaagtcac
    44941 ctcttcctgc cagacattac acagcacatt gcgacccgca atattcagcg tctctaatcc
    45001 agcaaaggaa aaagtagaac tcagggtcgc agagcgaaaa tggttgtctt cactccagag
    45061 aatatcgcgc gtccagcggc tgccatcttt tattgccagc gcgttacgca gagggtcctg
    45121 cccggaattt gtcacttcca gcagattatt attaagtttg acggttttta aaagacgtcc
    45181 attgtgggta accagcatgg cgttatcctg ggataaccat ttgctttgtt cttgttctat
    45241 atatcccagt accacaaaga ttcgttgccc ttcattaagg cgtaaataca tcgtggaata
    45301 aggcaacgcc tggatctgct gatccgctac ggtgatatcc tgattatcga aaaggctggc
    45361 gcgaaatgta tcgaccatac tttgctggct gtgcgtacat cccgcaagaa atagtgcgaa
    45421 aatcgataaa ataagagggc gcacctttaa tccttgaaag gttaattaaa aaaatgcaaa
    45481 tctttaaagc ccggtacgaa tatcgcaacc gggtatcatt taactttaat ttcgacgcgt
    45541 taaagcagta ttagcgtgta gtggacgtgg tggttgaggt gttatgagaa ccgccatcgc
    45601 cactgtcatt tgctgcaaca actgccaacg tcgccacacc aacagccgtt gccacaccga
    45661 caactgtcgc cgtgccgaca gcgccagcag ccacgccacc agtggtagta gcagtcgtgg
    45721 ttgcgccggt agtggtcgtt gtggtgccag tagtacccgt cgttgcctcg gtcccgtttg
    45781 ttgcttcagg ggcagcaaac gcagctggcg tcgtcaacat gaaggccata aggattgcag
    45841 aaagcttgtg tttcataact tttcctttat tcatcgcatg gacaatacgt acgcttgaga
    45901 tcaggattgt ctactttgag tataacatcc ttgtgaaatc tccctttcct cataccgctt
    45961 gcactatata ctgcgggtag gaaaggcgcg cagagggaaa tataagattg ttaactatcc
    46021 ccctctggaa atacgacttg tgagcataag ataaatctta gcaaaataca aattaaagat
    46081 aaggaaattg ttacgaaagc tattaattat tgctggtaat atagtttcaa gtggtactat
    46141 aactggctgt taaatggcat ttataactat taggtgcaga gatattcgct taaatggatt
    46201 agtttctttg tggaaaagta actgatgtta taatatatga tgttgactat tgcactattc
    46261 caataaaacc agtcagcttt aaacaagcag cgtcatatta agagagataa acatttgccg
    46321 ctgttggtcc tcgcaggcca tttacgcggc aaaattccac acgtaatcct ggtataagca
    46381 cttctgcgtc gcggggagtg aatgcggaaa tatggacctg aacttcttta cgaccgtcgg
    46441 aggggataat gaatcctttg ccgcttttgc gatcaaaggt tttgacaatt cctgtcattt
    46501 tacgggacaa acaaattcct tactgaaaat actgcgctgc actatacggg gttaataaaa
    46561 taaagccagc gatatttaag accgccggac ggctaaaata aaatttgctt aatctcaatt
    46621 atcatgcgtt aatagctgcg tcggtttgaa agacagacag catacaaagt agtttactaa
    46681 agcagttctc attatcaggc attatcccct tcttttgagt ctctctcctg aacactaagt
    46741 agtttctgta ttaaagccct gtttgccgaa aggcccaaaa tgaaggaagt aaaatatgtc
    46801 taataaaatg actggtttag taaaatggtt taacgcagat aaaggttttg gctttatcac
    46861 tcctgatgat ggcagcaaag acgttttcgt ccatttcact gccatccaga gcaatgaatt
    46921 ccgcacgctg aacgaaaatc agaaagttga attttctatt gagcaggggc aacgtggccc
    46981 cgcggcagcg aacgttgtta cgctctaagg ttgccgttat tactcaacat ctccatttcc
    47041 gctgtccatg ttgtcatggt tcacagtacc gcacatcggc attcgatgtg acggagcgaa
    47101 atcctttggg cgctaagtgt attttttgta aatcgacgat gatcaccttt gataacgtca
    47161 cgctgcaaat acgcactgac catgcgccgc tggatttcac aaaataatat caggctccct
    47221 cg
//
LOCUS       DADMIB010000010        43879 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.010, whole genome shotgun sequence.
ACCESSION   DADMIB010000010 DADMIB010000000
VERSION     DADMIB010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 43879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43879
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.010"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            83..607
                     /gene="lpfE"
                     /locus_tag="JNZ89_000615"
     CDS             83..607
                     /gene="lpfE"
                     /locus_tag="JNZ89_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000831418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long polar fimbrial protein LpfE"
                     /protein_id="HAY8934578.1"
                     /translation="MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELV
                     KDSVEVDMGTAVLKKPVRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFA
                     LDAGGATGVGLKIKTAAGVQQFPENTTPTPVEFAINGDGAHQLNYIASYVPIRADATI
                     GRADATVDFTVQYE"
     gene            860..2551
                     /gene="eptB"
                     /locus_tag="JNZ89_000616"
     CDS             860..2551
                     /gene="eptB"
                     /locus_tag="JNZ89_000616"
                     /EC_number="2.7.8.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418002.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid A phosphoethanolamine
                     7''-transferase"
                     /protein_id="HAY8934579.1"
                     /translation="MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWK
                     GVSAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYG
                     IIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRS
                     LAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAW
                     ARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
                     AQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDL
                     YAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLI
                     ILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVID
                     QVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQ
                     AFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN"
     gene            2643..2719
                     /locus_tag="JNZ89_000617"
     tRNA            2643..2719
                     /locus_tag="JNZ89_000617"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2677..2679,aa:Pro,seq:cgg)
     gene            3490..3720
                     /locus_tag="JNZ89_000618"
     CDS             3490..3720
                     /locus_tag="JNZ89_000618"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934580.1"
                     /translation="MLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTY
                     DASSVPLYNRLVEFKIGTTEVIPGLAEKWEVS"
     gene            3730..5070
                     /locus_tag="JNZ89_000619"
     CDS             3730..5070
                     /locus_tag="JNZ89_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001488423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY8934581.1"
                     /translation="MYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYH
                     KVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYA
                     DAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPD
                     ASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDV
                     KVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKE
                     AGLEKGFSIDLWAMPVQRPYNPNARCMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKD
                     GEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHN
                     KRVELYKQSQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE"
     gene            complement(5133..5360)
                     /locus_tag="JNZ89_000620"
     CDS             complement(5133..5360)
                     /locus_tag="JNZ89_000620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934582.1"
                     /translation="MTRSLELRVCIAHKSIPALVGQRMKYCCRMALHAEAQRHRVYRL
                     LTKCALFMPDAALTPYPAYKIVQIQYIAEFS"
     gene            5378..6397
                     /gene="dppB"
                     /locus_tag="JNZ89_000621"
     CDS             5378..6397
                     /gene="dppB"
                     /locus_tag="JNZ89_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppB"
                     /protein_id="HAY8934583.1"
                     /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
                     SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL
                     GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
                     NLTPASGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA
                     VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
                     GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
                     IRHKK"
     gene            6407..7309
                     /gene="dppC"
                     /locus_tag="JNZ89_000622"
     CDS             6407..7309
                     /gene="dppC"
                     /locus_tag="JNZ89_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppC"
                     /protein_id="HAY8934584.1"
                     /translation="MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLF
                     IAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDMLSRLMYGARLSL
                     LVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPS
                     IGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAP
                     LIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAI
                     LLTVLAFNLMGDGLRDALDPKLKQ"
     gene            7320..8303
                     /gene="dppD"
                     /locus_tag="JNZ89_000623"
     CDS             7320..8303
                     /gene="dppD"
                     /locus_tag="JNZ89_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HAY8934585.1"
                     /translation="MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS
                     GKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSL
                     NPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
                     EAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPG
                     KYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL"
     gene            8300..9304
                     /gene="dppF"
                     /locus_tag="JNZ89_000624"
     CDS             8300..9304
                     /gene="dppF"
                     /locus_tag="JNZ89_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP binding subunit
                     DppF"
                     /protein_id="HAY8934586.1"
                     /translation="MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFN
                     LERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQ
                     IVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPH
                     MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFI
                     SHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRER
                     IKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR
                     "
     gene            complement(9334..10605)
                     /locus_tag="JNZ89_000625"
     CDS             complement(9334..10605)
                     /locus_tag="JNZ89_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HAY8934587.1"
                     /translation="MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGL
                     KGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYF
                     LMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLF
                     KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQ
                     VLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAF
                     EQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRII
                     DTKKINSRMLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKV
                     AQLEKLRGFKAWLILLYGILLCLSPLLKLIE"
     gene            11081..11188
                     /locus_tag="JNZ89_000626"
     CDS             11081..11188
                     /locus_tag="JNZ89_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HAY8934588.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            complement(11275..12954)
                     /gene="bcsG"
                     /locus_tag="JNZ89_000627"
     CDS             complement(11275..12954)
                     /gene="bcsG"
                     /locus_tag="JNZ89_000627"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HAY8934589.1"
                     /translation="MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
                     LLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFS
                     TDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFS
                     LWPAGQPTTTVTTTGGNAAATVETTGGAPVVGDMPAQTTPPTTANLNAWLNNFYNAEA
                     KRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATS
                     YSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLK
                     EVRENGGMQTELMDQTNLPVILLGFDGSPVYDDTTVLNRWLDVTEKDKNSRSATFYNT
                     LPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGD
                     RMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIDQPSSFLAISDLVVRVLDGK
                     IFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ"
     gene            complement(12951..13142)
                     /gene="bcsF"
                     /locus_tag="JNZ89_000628"
     CDS             complement(12951..13142)
                     /gene="bcsF"
                     /locus_tag="JNZ89_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsF"
                     /protein_id="HAY8934590.1"
                     /translation="MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPR
                     YVKPAGTLRRTEKARATKK"
     gene            complement(13139..14710)
                     /gene="bcsE"
                     /locus_tag="JNZ89_000629"
     CDS             complement(13139..14710)
                     /gene="bcsE"
                     /locus_tag="JNZ89_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsE"
                     /protein_id="HAY8934591.1"
                     /translation="MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLAN
                     QTIASQAETAHVAVISMDSDPAKIFQLDDYQGPEKIKLFSMLNHEKGLYYLTRDLQCS
                     IDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSL
                     LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAE
                     IQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQI
                     EPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTM
                     IESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGV
                     LVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLP
                     TGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRI
                     PEPMRLLDDAVERSS"
     gene            14983..15171
                     /locus_tag="JNZ89_000630"
     CDS             14983..15171
                     /locus_tag="JNZ89_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934592.1"
                     /translation="MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQ
                     LAAALKRWPLLAEFAQQK"
     gene            15183..15935
                     /gene="bcsQ"
                     /locus_tag="JNZ89_000631"
     CDS             15183..15935
                     /gene="bcsQ"
                     /locus_tag="JNZ89_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsQ"
                     /protein_id="HAY8934593.1"
                     /translation="MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLL
                     RLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHRQTRL
                     SDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQ
                     ALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAMAECLAAKQPVGEY
                     RSDALAAEEILTLANWCLLNYSGLKTPVGSAS"
     gene            15932..18550
                     /gene="bcsA"
                     /locus_tag="JNZ89_000632"
     CDS             15932..18550
                     /gene="bcsA"
                     /locus_tag="JNZ89_000632"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417990.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HAY8934594.1"
                     /translation="MSILTRWLLIPPVNARLIGGYRDYRRHGASAFSATLGCFWMILA
                     WIFIPLEHPRWQRIRAEHKNLYPHINASRPRPLDPVRYLIQTCWLLIGTSRKETPKPR
                     RRAFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSL
                     ILALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRY
                     TSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVD
                     IFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIART
                     THEHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHF
                     FSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIA
                     VETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLD
                     NPLTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFV
                     LPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGG
                     LVEEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVL
                     GGAVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQIL
                     EGQKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWAL
                     WQDSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFILRRP
                     ERSETAQPSDQALAQQ"
     gene            18561..20899
                     /gene="bcsB"
                     /locus_tag="JNZ89_000633"
                     /pseudo
     CDS             18561..20899
                     /gene="bcsB"
                     /locus_tag="JNZ89_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417989.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
     gene            20906..22012
                     /gene="bcsZ"
                     /locus_tag="JNZ89_000634"
     CDS             20906..22012
                     /gene="bcsZ"
                     /locus_tag="JNZ89_000634"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HAY8934595.1"
                     /translation="MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVID
                     PSDARKITTSEGQSYGMFFALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKE
                     NSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG
                     SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFS
                     PDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTE
                     KNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNY
                     VLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH"
     gene            21994..25467
                     /gene="bcsC"
                     /locus_tag="JNZ89_000635"
                     /pseudo
     CDS             21994..25467
                     /gene="bcsC"
                     /locus_tag="JNZ89_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026226.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
     gene            25549..27537
                     /gene="hmsP"
                     /locus_tag="JNZ89_000636"
     CDS             25549..27537
                     /gene="hmsP"
                     /locus_tag="JNZ89_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator HmsP"
                     /protein_id="HAY8934596.1"
                     /translation="MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTAT
                     QLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIP
                     ERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLV
                     TIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIG
                     MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIIT
                     CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA
                     ITLGQQVLTIISERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGK
                     NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ
                     QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL
                     MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF
                     GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVE
                     TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK"
     gene            27720..29006
                     /locus_tag="JNZ89_000637"
     CDS             27720..29006
                     /locus_tag="JNZ89_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HAY8934597.1"
                     /translation="MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKL
                     IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
                     AGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPVSVIGAFASGNILQVLLFAVLF
                     GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQ
                     LGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRM
                     LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLI
                     VLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
                     VATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS"
     gene            29226..30722
                     /locus_tag="JNZ89_000638"
     CDS             29226..30722
                     /locus_tag="JNZ89_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HAY8934598.1"
                     /translation="MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQW
                     QVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQ
                     QGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHAL
                     QSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAM
                     TLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLS
                     IMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRA
                     QCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARA
                     DTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILL
                     QPKGEPEFNMKALQAAWDQIMAPSTAAAATSVATDDVHPEVTDIPPAQ"
     gene            complement(30818..31966)
                     /locus_tag="JNZ89_000639"
     CDS             complement(30818..31966)
                     /locus_tag="JNZ89_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709304.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8934599.1"
                     /translation="MFKSDAARTRQRLSARKGRTLPPGRGKFPHSTTESFRNTFWLKK
                     IMEHCFNIVDQQTTTAQTNANFLQIRFTTMSKKIAVIGECMIELSEKGADVKRGFGGD
                     TLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDISLTQRMENRLPGL
                     YYIETDSTGERTFYYWRNEAAAKFWLESEQSTAICEELANFDYLYLSGISLAILSPTS
                     REKLLSLLRECRANGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDA
                     LWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTA
                     AGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREAMPA"
     gene            31979..32746
                     /gene="pdeH"
                     /locus_tag="JNZ89_000640"
     CDS             31979..32746
                     /gene="pdeH"
                     /locus_tag="JNZ89_000640"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417982.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase"
                     /protein_id="HAY8934600.1"
                     /translation="MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRL
                     MAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLA
                     SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLGDF
                     GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE
                     TPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL"
     gene            32816..34876
                     /locus_tag="JNZ89_000641"
     CDS             32816..34876
                     /locus_tag="JNZ89_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HAY8934601.1"
                     /translation="MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSA
                     ELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRV
                     EATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWS
                     FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFG
                     LKAQGRYNGEQLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGG
                     VDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGD
                     SDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKS
                     VQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQP
                     LKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAE
                     LRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNC
                     AAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSP
                     LYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILS
                     QMKK"
     gene            complement(35110..36432)
                     /locus_tag="JNZ89_000642"
     CDS             complement(35110..36432)
                     /locus_tag="JNZ89_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HAY8934602.1"
                     /translation="MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATA
                     AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLL
                     TMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
                     LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
                     LHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFST
                     AAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLLILFALF
                     AFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSI
                     LGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETQHQSL"
     gene            complement(36843..37856)
                     /gene="yhjD"
                     /locus_tag="JNZ89_000643"
     CDS             complement(36843..37856)
                     /gene="yhjD"
                     /locus_tag="JNZ89_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YhjD"
                     /protein_id="HAY8934603.1"
                     /translation="MTQENEIKRPTQDLELEPIKQLDNSEKGGKVSQALETVTTTAEK
                     VQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML
                     LQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAI
                     RAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH
                     LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVI
                     KIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMLGK
                     TQP"
     gene            complement(37905..38876)
                     /locus_tag="JNZ89_000644"
     CDS             complement(37905..38876)
                     /locus_tag="JNZ89_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8934604.1"
                     /translation="MLEKTINNAICALLFRCEQQSVKEMDKIHAMQLFIKVAELESFS
                     RAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLNE
                     LDGLFQQDATSISGKLRIDIPPGIAKNLLLPRLSEFLYLHPGIELELSSHDRPVDILH
                     DGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTP
                     HLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLAAGLAGLGIIQIPRIAVREALRA
                     GRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEHLD"
     gene            39324..39926
                     /locus_tag="JNZ89_000645"
     CDS             39324..39926
                     /locus_tag="JNZ89_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY8934605.1"
                     /translation="MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES
                     YPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVP
                     RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK
                     EIGRTLNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS"
     gene            complement(39977..41626)
                     /gene="treF"
                     /locus_tag="JNZ89_000646"
     CDS             complement(39977..41626)
                     /gene="treF"
                     /locus_tag="JNZ89_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreF"
                     /protein_id="HAY8934606.1"
                     /translation="MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMI
                     EGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
                     FDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQ
                     SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
                     LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMP
                     DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
                     TGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVKRY
                     LWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGIL
                     ASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKLI
                     EKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
     gene            42030..43427
                     /gene="ccp"
                     /locus_tag="JNZ89_000647"
     CDS             42030..43427
                     /gene="ccp"
                     /locus_tag="JNZ89_000647"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HAY8934607.1"
                     /translation="MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAV
                     SENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAAL
                     LADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
                     SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGV
                     DGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSW
                     DEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENA
                     LTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKE
                     ERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFL
                     HSLNGVYTPYMQDKQ"
     gene            43638..>43879
                     /locus_tag="JNZ89_000648"
     CDS             43638..>43879
                     /locus_tag="JNZ89_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY8934608.1"
                     /translation="MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
BASE COUNT        10541 a        11002 c        11924 g        10412 t
ORIGIN      
        1 ccgttagcac taccggaaaa ttacccgctg ccggggatta tagcggtatt gctaccatac
       61 atgtcgaact ggagtaacag tcatgaagcg aacaatactt gcgttatgcc tgctgcctct
      121 ttccttttcg tcattcgcgg caaccacgga tttagggccg aaaggaacat tgaaattcac
      181 ccttaaaatc agccagggtg cttgcgaact ggtgaaagac agcgttgagg ttgacatggg
      241 caccgcggtt ctcaaaaagc cggtaagaat cggaacggaa attaatccca ctcctttttc
      301 catcggcctg aaaaactgta gcgaagtggt cagagcctac gtgactatgg acggtacacc
      361 caatgcagac gactcaaatc tttttgcgct ggatgcgggt ggcgctacag gcgttgggct
      421 gaaaatcaaa accgctgctg gagtacaaca gttcccggaa aatacaacgc cgacaccggt
      481 tgagtttgca attaacggtg atggcgcaca tcaactgaac tatatcgcca gctacgtgcc
      541 tattcgcgcc gatgcaacta ttggtcgcgc agatgcaacg gtcgacttta ctgtacagta
      601 cgaataattt cacatcttaa gggccagtta actggccctt tttactgctt tttgtaacgc
      661 taaagtctct tttcaaactt gcatttttgt aaatttgtgc ttcatgcaca ctctttcccc
      721 acactttttc gctttgctgt ggtctactta ttcgcgcgtg tagattttac ttatctgact
      781 acctccgcac ttttcccctg ccgggcctga aaagccgcta agcagggtgt tatcacctgt
      841 ttgtccaggg tttgtttgca tgagatacat caaatcgatt acacagcaga agctgagctt
      901 tttgcttgca atctatattg gcctttttat gaatggcgcg gttttttatc gccgcttcgg
      961 cagctatgcg cacgatttta ccgtctggaa aggcgtttct gctgttgttg aactggccgc
     1021 caccgtactg gtgaccttct ttttactacg tcttctatcg ctgtttggcc gccgcagctg
     1081 gcgtattctg gcgtcgctgg tggtgctctt ttccgcaggt gccagctatt acatgacctt
     1141 ccttaatgtg gtcattggtt atggcatcat cgcttccgtc atgaccaccg atatcgacct
     1201 gtcaaaagaa gttgttggtc tgaactttat tctctggtta atcgccgtta gtgcattgcc
     1261 tcttatcctt atctggaata accgctgtcg ctacaccttg ctccgacaac tgcgaacccc
     1321 agggcagcgt attcgcagcc tggcggtcgt cgtactggcg ggtattatgg tttgggcacc
     1381 gattcgtttg ctggatatcc agcagaagaa agtggagagg gcgaccggcg ttgatttgcc
     1441 gagttatggc ggtgtcgtag cgaactctta tctgccatca aactggcttt ctgcgttggg
     1501 gctgtatgcc tgggcgcggg tcgatgaatc ttccgataat aattcattgc ttaatccggc
     1561 gaagaagttt acataccagg ctccacaaaa cgttgatgat acttatgtcg tgtttatcat
     1621 cggtgaaacc acgcgttggg accatatggg tattttcggc tatgagcgta ataccacgcc
     1681 gaaactggcc caggagaaaa atctggcggc gttccgtggt tactcctgtg ataccgcaac
     1741 caaactctca ctgcgttgca tgtttgtacg tcaggggggc gcggaagata atccgcagcg
     1801 cacattaaaa gaacagaaca ttttcgcggt tctgaagcag ttaggattca gttctgacct
     1861 ctacgctatg cagagcgaaa tgtggttcta cagcaacacg atggcggaca acattgctta
     1921 tcgtgagcag attggtgcgg agccacgtaa tcgtggcaag ccggtagatg atatgttgct
     1981 ggtagacgaa atgcagcaat cgctagggcg caacccggat ggtaagcatc tgatcattct
     2041 gcataccaaa ggttcgcatt ttaactacac ccagcgttat ccgcgtagct tcgcgcagtg
     2101 gaagccggaa tgtattggtg ttgatagcgg ctgtaccaaa gcgcagatga tcaactccta
     2161 tgacaactcg gtgacctatg tggatcactt tatctccagc gtgattgatc aggttcgcga
     2221 taagaaagcg attgtgttct acgcagctga ccacggtgag tcaattaatg aacgcgagca
     2281 cctgcacggc acgccgcgtg aattggcacc gccggagcag ttccgcgtac cgatgatggt
     2341 ctggatgtca gataaatatc tggaaaatcc ggccaatgcg caggcatttg cgcagctgaa
     2401 aaaagaagcc gacatgaaag tgccacgccg tcacgtagag ctgtacgata ccatcatggg
     2461 ttgtcttggc tatacttcac cggatggtgg aattaacgaa aacaacaact ggtgtcacat
     2521 cccgcaggca aaagaggcag cggctaacta agcggcctgc tgactttctc gccgatcaaa
     2581 aggcattttg ctattaaggg attgacgagg gcgtatctgc gcagtaagat gcgccccgca
     2641 ttcggtgatt ggcgcagcct ggtagcgcac ttcgttcggg acgaaggggt cggaggttcg
     2701 aatcctctat caccgaccaa attcgaaaag cctgctcagc gagcaggctt ttttgcattt
     2761 gaagcccatg aggatgagaa cctccggggg ctgggaggtt cgactcgacg taggcctgat
     2821 aagacgcgcc agcgtcgcat caggcaacgg caccgcactt attgtcggat gcggcgcgac
     2881 cgccttattc gaccaacaca ccacacattt tcctgccaac tttgcgcccc atatctcact
     2941 atccattaac ggatttgtga cagaaaccat tgtctttttt tatatttgct taaatctttt
     3001 tttgcgttac ttatggctgg cgctggcatt ttccgctgtg cgttttagcg ttcatggtat
     3061 taatcgctca gatatccacc ttttcctcag atttttttca ttaaatgcat aaaacttaat
     3121 caccaaatgt tgctaaatat taagctgatt gttctggtta tgttggagta gcacaaattt
     3181 ctctgctgca aatagctgtt tgaagttttt taatctttgt ttgtgggttc tcaccgttgg
     3241 tgtaaatccc ggttggctgt attgacgttt tcacattctg ttgacagatt gtaggtcacg
     3301 aggggcattt tatggaggat ccgcactgtt acactgatgt taattagtac ggcatcccca
     3361 cctcataacg ttgacccgac cgggcaaaaa acaaaaaagg tcaggtagcg acaacccact
     3421 gcaaagggtt aaaacaacaa acatcacaat tggagcagaa taatgcgtat ttccttgaaa
     3481 aagtcaggga tgctgaagct tggtctcagc ctggtggcta tgaccgtcgc agcaagtgtt
     3541 caggctaaaa ctctggttta ttgctcagaa ggctctccgg aagggtttaa cccgcagctg
     3601 tttacctccg gcaccaccta tgacgcctct tccgtaccgc tttataaccg cctggttgaa
     3661 tttaaaatcg gcaccactga agtgataccg ggcctcgctg aaaagtggga agtcagctaa
     3721 gacggtaaaa tctatacctt ccatctgcgt aaaggtgtga agtggcacga caataaagaa
     3781 ttcaaaccga cgcgtgaact gaacgccgat gacgtggtgt tctcgttcga ccgtcagaaa
     3841 aacgcgcaaa acccgtacca taaagtctct ggcggcagct acgaatactt cgaaggcatg
     3901 ggcttgccgg agctgatcag tgaagtgaaa aaggtggacg acaacacagt tcagttcgta
     3961 ctgactcgcc cggaagcgcc gttcctcgct gatctggcaa tggacttcgc ctctattctg
     4021 tcaaaagaat atgctgatgc gatgatgaaa gccggtacac cggaaaaact ggacctcaac
     4081 ccaatcggaa ccggtccgtt ccagttacag cagtaccaaa aagattcccg tatccgctac
     4141 aaagcgtttg atggctactg gggcaccaaa ccgcagatcg atacgctggt cttctctatt
     4201 acccctgatg cttccgtgcg ttacgcgaaa ttgcagaaga atgaatgcca ggtgatgccg
     4261 tacccgaacc cggcagatat cgctcgcatg aagcaggata aatccatcaa cctgatggaa
     4321 atgccggggc tgaacgtcgg ctacctctcg tataacgtgc agaaaaaacc gctggatgac
     4381 gtgaaagttc gccaggcact gacctacgcg gtgaacaaag acgcgatcat caaagcggtt
     4441 tatcagggcg cgggtgtatc agcgaaaaac ctgatcccgc caaccatgtg gggctataac
     4501 gacgacgttc aggattacac ctacgatcct gaaaaagcga aagccttgct gaaagaagcg
     4561 ggtctggaaa aaggtttctc catcgacctg tgggcgatgc cggtacaacg tccgtataac
     4621 ccgaacgctc gctgcatggc ggagatgatt caggcagact gggcgaaagt gggcgtgcag
     4681 gccaaaatcg tcacctacga atggggtgag tacctcaagc gtgcgaaaga tggcgaacat
     4741 cagacggtaa tgatgggctg gactggcgat aacggggacc cggataactt cttcgccacc
     4801 ctgttcagct gcgccgcctc tgaacaaggt tctaactact caaaatggtg ctacaaaccg
     4861 tttgaagatc tgattcaacc ggcgcgtgct accgacgacc ataacaaacg cgttgaactg
     4921 tacaagcaat cgcaggtggt gatgcacgat caggctccgg cactgatcat cgctcactcc
     4981 accgtgtttg aaccggtacg caaagaagtc aaaggctatg tggttgatcc attaggcaaa
     5041 catcacttcg aaaatgtctc tatcgaataa ttaaaagcca tacaagactg atggtaaagg
     5101 caaaactgcc tgatgtgctc cgcttatcag gcctacgaaa attctgcaat gtattgaatt
     5161 tgcacgattt tgtaggccgg ataaggcgtt aacgccgcat ccggcataaa caaagcgcac
     5221 tttgtcaaca atctgtatac ccggtggcgc tgtgcctctg cgtgcagcgc catccggcag
     5281 caatacttca ttctctgtcc gacaagggcg ggaattgatt tgtgagcaat acagacacgc
     5341 agttccaggc tgcgggtcac tatagagaat ccgggttatg ttgcagttta ttctccgacg
     5401 tttgggactc gtcatcccca cgtttatcgg tattaccctt ctcacatttg cctttgtcca
     5461 catgatcccg ggcgatccgg tgatgatcat ggcaggcgaa cgtgggatct cccctgagcg
     5521 tcacgcgcag ctgctggctg aactcggctt agataaaccg atgtggcagc agtatctcca
     5581 ttacatttgg ggcgtaatgc acggcgatct aggcatttca atgaaaagcc gaattccagt
     5641 atgggaagag ttcgtgccgc gctttcaggc cacgctggaa cttggcgtct gcgcgatgat
     5701 ttttgctacg gcagtcggta ttccggttgg tgtgctggct gcggttaaac gcggttccat
     5761 tttcgatcac actgcagttg gcctggcgct gaccggctac tcgatgccga tcttctggtg
     5821 gggcatgatg ctgatcatgc tggtttcggt gcactggaac ctgacgcccg cctccggtcg
     5881 cgtgagcgat atggtgttcc tcgatgactc caatccgtta accggtttta tgctaatcga
     5941 caccgccatc tggggtgaag acggcaactt tatcgatgcc gtcgcccata tgatcttgcc
     6001 tgccattgtg ctgggtacta ttccgctggc ggtcattgtg cgtatgacac gctcctcgat
     6061 gctggaagtg ctgggcgagg attacatccg caccgcgcgc gccaaagggc taacccgcat
     6121 gcgggtgatt atcgtccatg cgctgcgtaa cgcgatgctg ccggtggtga ccgttatcgg
     6181 cctgcaggtg ggaacattgc tggcgggggc gattctgacc gaaaccatct tctcgtggcc
     6241 cggtctggga cgctggttga ttgacgcact gcaacgccgc gactatccgg tagtgcaggg
     6301 cggcgtattg ctggtggcga cgatgattat cctcgtcaac ttgctggtcg atctgctgta
     6361 cggcgtggtg aacccgcgta ttcgtcataa gaagtaaggg gacatcatgt cacaggttac
     6421 tgaaaataaa gtgattagcg caccggtgcc gatgaccccg ttacaggagt tctggcacta
     6481 ttttaaacgc aacaaaggcg cggtcgtcgg gctggtttac gtcgtcatcg tgctgttcat
     6541 cgcgatcttt gccaactgga ttgcacccta taacccggcg gaacagttcc gcgatgcact
     6601 gctcgccccg ccagcctggc aggaaggcgg cagcatggcg cacttgctgg gcaccgatga
     6661 cgtaggccgt gatatgctgt cgcgcctgat gtacggtgcg cgcctgtcgc tgctggttgg
     6721 ctgtctggta gttgtgttat cgctgattat gggcgttatt ctcggcctga tcgccggtta
     6781 ctttggcggc ctagtcgata acatcattat gcgcgtggtc gatatcatgc tggcgctgcc
     6841 aagtctgctg ctggcgctgg tgctggtggc aattttcggc ccgtcgattg gtaacgccgc
     6901 gctggcactg accttcgttg ccttgccgca ctatgtgcgc ttaacccgcg ccgccgtgct
     6961 ggtggaagtt aaccgcgatt acgtcaccgc gtctcgcgtg gcgggtgccg gggcgatgcg
     7021 tcagatgttt attaacatct tcccgaactg ccttgcgccg ctgattgttc aggcgtcgct
     7081 cggtttctct aacgccattc tcgatatggc tgctcttggt ttcctcggca tgggggcaca
     7141 gccgccaacg ccggagtggg gcaccatgct ctccgacgtg ttgcagttcg cgcaaagcgc
     7201 ctggtgggtc gtgaccttcc cgggtctggc gatcctgctg acggtgctgg catttaacct
     7261 gatgggtgac ggtctgcgtg acgcgctcga tcccaaactg aagcagtaag aggttcgaga
     7321 tggcgttatt aaatgtagat aaattatcgg tgcatttcgg cgacgaaagc gcaccgttcc
     7381 gcgccgtaga ccgcatcagc tacagcgtaa aacagggcga agtggttggg attgtgggtg
     7441 agtccggctc cggtaagtcg gtcagttccc tggcgattat ggggctgatt gattatccgg
     7501 gccgcgtaat ggcggaaaaa ctggtgttta acggtcagga tttgcagcgt atatcagaaa
     7561 aagagcgccg caacctggtg ggtgccgaag tggcgatgat cttccaggac ccgatgacca
     7621 gccttaaccc gtgctacacc gtgggtttcc agatcatgga agcgattaag gtgcatcagg
     7681 gcggcaacaa aagtacccgc cgtcagcggg cgattgacct gctgaatcag gtcggtattc
     7741 ccgatccggc ttcgcgtctg gatgtttacc cgcatcagct ttccggcggc atgagccagc
     7801 gcgtgatgat cgccatggcg attgcctgtc gaccaaaact gctgattgcc gatgagccga
     7861 ccaccgcgct ggacgtgacc attcaggcgc aaatcatcga actactgctg gagctacagc
     7921 agaaagagaa catggcgctg gtgttgatta cccatgacct ggcgctggtg gcggaagctg
     7981 cgcataaaat cattgtgatg tatgcaggcc aggtggtgga aacgggcgat gcgcacgcca
     8041 tcttccatgc gccgcgtcac ccgtatactc aggcattgct gcgtgcgctg ccagaatttg
     8101 ctcaggacaa agaacgtctg gcgtcgttgc caggtgtcgt tcccggcaag tacgaccgcc
     8161 cgaacggctg cctgcttaac ccgcgctgcc cctatgccac tgacagatgt cgcgctgaag
     8221 aaccggcgct gaatatgctc gctgacgggc gtcagtccaa atgccattac ccacttgatg
     8281 atgccgggag gccgacacta tgagtacgca agaggccacc ctgcaacaac cgctgttgca
     8341 ggctatcgac ctgaaaaaac attatccggt gaagaaaggc atgttcgcgc cggaacgtct
     8401 ggttaaagcg ctggatggcg tttcgtttaa ccttgaacgt ggcaaaacgc tggcagtagt
     8461 gggcgaatct ggctgcggta aatcgaccct cggtcggttg ctgacgatga ttgaaacgcc
     8521 caccggtggc gagctgtatt accaggggca ggatctgctt aagcacgatc cgcaggcgca
     8581 gaagctgcgt cggcagaaaa tccagatcgt cttccagaac ccttacggtt cgctgaatcc
     8641 gcgtaaaaaa gtcgggcaaa ttcttgaaga gccgctgctg atcaacacca gcttaagcaa
     8701 agaacagcgt cgggaaaaag ccctgtcgat gatggcgaaa gtcggcctga aaaccgagca
     8761 ctatgaccgc tatccgcata tgttctccgg cggtcagcgt cagcgtatcg ccatcgcccg
     8821 tggtctgatg ctcgacccgg atgtggtgat tgccgatgaa ccggtttccg cgctggatgt
     8881 ttcagtgcgc gcgcaggtgc tgaatctgat gatggatttg cagcaggagt tggggctgtc
     8941 ttatgtcttt atctcccacg acctgtcggt ggtggagcac attgctgatg aagtgatggt
     9001 gatgtacctg ggccgctgcg tggagaaggg aacgaaagac caaatcttca ataacccgcg
     9061 ccatccgtac actcaggcgc tactttccgc gacgccgcgc ctgaacccgg acgatcgccg
     9121 cgagcgcatc aagctcagcg gtgaactacc aagcccactg aatccaccgc cgggttgcgc
     9181 cttcaacgcc cgctgtcgtc ggcgcttcgg cccctgcacc cagttgcagc cgcagctaaa
     9241 agactacggc ggtcaactgg tagcttgttt tgctgttgat caggatgaaa atccgcagcg
     9301 ttaactcaca aaaccggggc catgcgctcc ggtttactca atcagcttca acagtggcga
     9361 caagcatagc aaaatgccgt aaagcagaat tagccaggct ttaaatccgc gaagtttttc
     9421 cagttgtgcg actttataga tcaggaaaaa cggaatgagg cacgacacaa tgccatataa
     9481 cgggcttccc aactgaaaga acaccagcac cgatacacga aacgaaaccc aaatcgtcaa
     9541 cgtaatgacg ataaaagcgc agatcgccag agtcagcatg cgtgagttaa ttttcttggt
     9601 atcaataatt cggcttaaca gattgagaat aatgccttta atagcctcgt ggaaaccgag
     9661 ataaatgcca aagaatgcgg tcagtacggc aaagatattc agcaccgtag aggtgatatg
     9721 aatgatatgt ccagggatca cctgcgcggc cagtgccagt gccgagatat tttgttcaaa
     9781 ggcagaaacg gcttcttcgt ggctaattga gaaggtaaac gaaaaggcaa aaaacaggat
     9841 caccgcgatg agcgtgatat aactaattcg gtgggtacgc agcgcgagcc gggttgccag
     9901 tactttatct gcttcccgtt tacgataggc aatattcatt gggttaagta cctgaataaa
     9961 taccgcagaa aagaagcaaa atggaattgt aagcaggaca tcgcggaaaa agacggaggc
    10021 ttgcgggaag gcggttatat tggcgaaatt ccagtgcggg atcatcgcaa aaccgaacac
    10081 gacaataatc cctactttga ccaccaccat tggcccggaa atcttaaaca gtaatcgttc
    10141 accaccagac gcaatcgcta ccagtacggc gaaaatagcg actttataaa gtagagattg
    10201 tgaaagatcg gcatcggtta aaccgaaggt tttcaggtac gaggcgctgt cgaaaaccac
    10261 ggagagagag tagataaaaa tcccgtggat aatcatcaaa aagtagataa ccccgaggaa
    10321 aattccccag ttcttcccca ggtaatgact gataatatcg gtgtagtcat tacaggaatc
    10381 gctttcagaa agggttttta aataaatgtc ctgcactacc caggtggcag gataagcaat
    10441 gatcgctgcg gtaataaata cccaaattcc cttcaagcca atttgtactg gcatcagcac
    10501 ggttccggca ccaatcgcca tgcctatgca taataaaacc cagccgaagt cgtagcgtgt
    10561 aaacggcaat ttctgattgt gtttcgatag tgtgttgtgc tgcataaagt cctgtccaga
    10621 aagaagtcgg cctcgcaaaa atgaataaac ccagtttctc ttgcgcaaca ggtggagaag
    10681 tcgaatacgc agtatgtaaa aaatgaggca acagattcac tggggaggtc gcgaggaggc
    10741 gcaattctac aaaattgcgc atttcactac cagtctggag tcagcccgga tatgaactgc
    10801 aactattgca aataaagaaa ttaagctgga aggcatcgcg caatgaggaa gattgccggg
    10861 tgctgacagt aaaaagcaat cgtaaaatca gcggcaagcc gaaagggttc cggtgaggcg
    10921 caatgttgcg ggggctttat ccctggtggc attggttgct ggagagagaa aacccccgca
    10981 cgttgcaggt atgcacctga caacatcacg ggggctaatc ttgaacccaa acaactcaag
    11041 aatagccgcg aaacgttggc attacaacac aggcggctat atgacgctcg cagaactggg
    11101 catggccttc tggcatgatt tagcggctcc ggtcattgct ggcattcttg ccagtatgat
    11161 cgtgaactgg ctgaataagc ggaagtaacg tgtcatgcgg gcgtcaggct gccgtaatgg
    11221 caatttgcgc ccggatcagg ccgcagaggt taaactctgc ggcctttttc gtgcttactg
    11281 cgggtaaggc acccagtcgc cgccgttcag gcgaacgtac ggtttatcct ggtattgaat
    11341 aactactgca tttgagttct cggagaccgg tgctgtttgt ggcaacccac tggtgagttt
    11401 tttccagtca acattgtctt cggtgaaaat cttgccatca agaacgcgaa ccaccagatc
    11461 ggagatagcc aggaagctgc tcggttggtc gatgacaatc ggtgccccct gatgtggtgc
    11521 cttcatgccg aagaatttca ccccaacggg gacgtctgtg atagacgggc tagggatatc
    11581 acgtaggcca gatacctgca ttctgtcgcc cttcagcgcg ccgccgtgtt ccggcaccac
    11641 gaccaccatc actttacgac ccgatttctc cagttcagta aagaaggcgt ccagttcatc
    11701 aaagaatttc tgcgcccgcg ctttgtaatc cgctgttttg ctgacccccg gataatggtt
    11761 gccgtcatgc agtggaagcg tgttgtagaa cgtggcacta cggctgtttt tatctttttc
    11821 ggtaacgtcc agccagcggt taagcacggt ggtatcgtca taaaccggcg aaccatcaaa
    11881 gcccagcaaa ataaccggca gatttgtttg atccatcaat tcagtctgca tgccgccatt
    11941 ttcgcgaact tctttcaaaa aaccgccgaa ctggccgtta tgtcccatca tcaggtgctg
    12001 ggtaaagccc agtttcgaaa ggttatcaaa cagatagcag tcgttatttg ccggttgata
    12061 cagattagtg tgcgaagtct gcccgcagct ggcgcgcagt aaacggatcg ccgccgggcc
    12121 actgtaggag gtggcggagt taaagttctt gaactcaata tcgaaatgcg accacagtgg
    12181 atgcgacatc aacccggcgg cttctatatc cgaccaggaa agcgaacaga tgttaatcac
    12241 cagtagttca aatggctgag catcagcggg cagcgaagac gggaaggtcg atttacgttt
    12301 cgcctccgcg ttatagaaat tattcagcca ggcgttaagg ttcgccgttg ttggcggtgt
    12361 agtttgtgcg ggcatatcac ccactaccgg tgcgccaccc gtcgtctcaa cggttgccgc
    12421 tgcgttacca cccgtcgttg ttacagtggt cgtcggttgt ccggctggcc acaaggagaa
    12481 acttggtccc gccagggtaa gtacgttcag ccatagcagt atggcaacca caaaaacggt
    12541 aatgcgaatc cattgtgaca ggaataacca ggccactaat aaaacaaaaa tggccccaat
    12601 catctgccag ttaataaagc gtgtgacaag gtcgattaaa taatcggtac tgaaccccgc
    12661 cacctgcgaa ccctggctca ttatgctttc cgggccaggc aaccaggtgt catgccagaa
    12721 caaagcaaag ccgatcggca gggcaatcca gtggcgcaag cgatgcaggc tgtagcgcgg
    12781 aatgggcatc agcagaaacg cggcaaacac caaattgagg agcggatgga agttaagata
    12841 tcccgcccac aacaggccga acttaaccag aaaatagaag ttccagccgg aaaggccgcg
    12901 ccagtattgc cagagggaag aaggcatggc ggtattttgc gtaaattgag tcattttttg
    12961 gttgccctgg ctttttccgt gcggcgtaat gtcccggccg gtttaacata acgaggttta
    13021 gcaaagaaca aacgtaaggt gtcgcgaatg cgtcgcaaag agtgccgcgc cagatagccc
    13081 agcgggaaaa atatcagtgc gcaaacgaca ataatttcaa tgatatcgct gatggtcatc
    13141 atgatgagcg ctccacagca tcatctaaca gtcgcatggg ttctggtatt cgtcgccagt
    13201 ggcgaccatc gtgctcggca ttgatgaccg gtttagaact ttgcgttaaa ggcagcggca
    13261 tgccccattg ttctggggca agcaggcgca tctgcaccag ctcggcactg atttgatcat
    13321 cttcaaacca gaccatacgg tttgagaaaa tgtcgccagt aggcaatggg aaaatatgat
    13381 tcaacgcggt atccagatcg ttaatccgac agaatgagag aaacagcacc agccgattac
    13441 cgccaatggt catgatatcg ccggtacggt tagggcgaca cagcgtcagg gcttgttcaa
    13501 cgcggatacc cggtaccgga cgtagggcaa ccagaacgcc tttaccgtgg gcaggtaata
    13561 gagggttatt catcatgttg ttgacggcat tacagaacac atcccacttc tggaaaccac
    13621 gcagtttgag cggctgggtc attgacagca aggtagtgat atcttccggc acatagcgac
    13681 taaacttctg cccttgcacg ctttcgatca tcgtcagaca acgggagagt ggcgcattcc
    13741 acggaataac catatttgca ccgcaggcca ataacaaacg ttcatcggtg gcgcgcaggc
    13801 tagcggtatt ttcccgcacg aggattttca tcgcactacc gcgctggcga cgcagggtat
    13861 gaatgctgcg ggccagtggc tcgatttgcg cattttgctg taaagaaaag accaccgtcg
    13921 ccgcctgagc ggtacgggct tcattgaaca ggacttcgtt attgttgaac agttgccagt
    13981 gttccgatag cggcggcgca ccttccagta cagcaacatt actcagaatg cgtttttcgt
    14041 cgctgcgtgg ttggatctcc gcctcttcgc tttgaactaa tgtccagata ccattttgtt
    14101 gctgaacgct aagctgctga cgggcgctga cccctttttc gttgcaccag aaggcaatat
    14161 ccagcaaatg ttggtcaccc tgaaaacgca aactggcaag accaaaaagt gaacggtatt
    14221 cctcaagcaa caatgaaaat tgtttatcgt tattatttcc gggattaatt accaaaagcg
    14281 aacaatgggt taacctgctc catttattca ttttatccaa ccatgagcga agccgctcgg
    14341 caggaatgtt ttgccatgcg ttatttgcgc aaacaagaat aaaaaggtaa ttatggggat
    14401 caatagaaca ctgcaaatca cgggtcaaat agtatagacc tttttcatga tttagcattg
    14461 aaaataattt tattttttcc ggcccttgat aatcatctaa ttgaaagatt ttcgccggat
    14521 cgctgtccat gctaatgacc gcgacgtgtg cggtttcagc ctgggatgca attgtttgat
    14581 tcgccagact gatagcatct tcatggcgat cgacgttaaa ccaccagacg ccgcctgctg
    14641 gcatatgtcg cagctcatcc cataatgatg agataccgat agagaataca gggcccacaa
    14701 tgtccctcat gtcaccattt tgtctgatta tcagtttact agcgaaagct aagaaataaa
    14761 cctaccattg aaattaaaac ttatcagatt tagcatgtga atcaatttag aaggtcacaa
    14821 gacgtgtgat tttagtcttt tcgtttttaa ctttttctgt tgcgtaacgg aaagtcaaaa
    14881 agtgagcaaa ttcccgtctc gccgtaaaca ataaaccggc gaaatgctca cggttagaat
    14941 tgtctcatga acggtacggt tatttcatag ggatcaagca aaatgaataa caatgaacca
    15001 gatactctgc ctgatcccgc gataggctat atcttccaga atgatattgt ggcgttaaag
    15061 caggcatttt cactgcctga tattgattat gccgatattt cccaacgcga acagttggcc
    15121 gcggcattaa aacgctggcc gttgctggca gagtttgcgc aacaaaagta ggggattggt
    15181 gaatggccgt actgggattg cagggggtgc ggggaggcgt ggggacaaca accatcaccg
    15241 ccgcattagc ctggtcatta caaatgttgg gagaaaatgt cctggtggtc gatgcctgcc
    15301 cggacaactt gttgcgcctg tcatttaatg ttgattttac ccaccgtcag ggctgggcca
    15361 gagcgatgct ggatggccag gactggcgtg acgctgggtt gcgctacacc tcgcagctcg
    15421 atttgctgcc ttttggtcag ttatccattg aagaacaaga aaatccacag cacaggcaaa
    15481 cccggctgag cgatatttgc tccggcttac agcaactaaa agccagcggg cgttaccagt
    15541 ggattttaat cgacttaccg cgtgatgcct cgcagataac ccaccagctg ctgagtttgt
    15601 gcgatcactc gctggcaatc gtcaatgtgg atgccaactg ccatatccga ctgcatcagc
    15661 aagcgctgcc ggatggcgca catattttga ttaatgactt ccgtattggc agtcaggttc
    15721 aggacgatat ttaccagctt tggttgcaaa gccagcgccg attactgccg atgctcattc
    15781 atcgtgatga agcgatggct gaatgcctgg cggctaagca accagtaggt gaatatcgca
    15841 gtgatgcgct ggcggctgaa gagatactga cgctggcgaa ctggtgcctg ttgaactact
    15901 ccgggctgaa aacgccagtc gggagtgcat catgagtatc ctgacccggt ggttgcttat
    15961 cccgccggtc aacgcgcggc ttatcggggg ttatcgcgat tatcgtcgtc acggtgcgtc
    16021 ggctttcagc gcgacgctcg gctgtttctg gatgatcctg gcctggattt ttattccgct
    16081 ggagcacccg cgctggcagc gtattcgcgc agaacataaa aacctgtatc cgcatatcaa
    16141 cgcctcgcgt ccgcgtccgc tggacccggt ccgttatctc attcaaacat gctggttact
    16201 gatcggtaca tcgcgcaaag aaacgccgaa accgcgcagg cgggcatttt caggtctgca
    16261 gaatattcgt ggacgttacc atcaatggat gaacgagctg cctgagcgcg ttagccataa
    16321 aacacagcat cttgatgaga aaaaagagct cggtcatttg agtgccgggg cgcggcggtt
    16381 gatcctcggt atcatcgtca ccttctcgct gattctggcg ttaatctgcg ttactcaacc
    16441 gtttaacccg ctggcgcagt ttatcttcct gatgctgctg tggggtgtag cgctgatcgt
    16501 acggcggatg ccggggcgct tctcggcgct aatgttgatt gtgctgtcgc tgaccgtttc
    16561 ttgccgttat atctggtggc gttacacctc tacgctgaac tgggacgatc cggtcagcct
    16621 ggtgtgcggg cttattctgc tcttcgctga aacgtacgcg tggattgtgc tggtgctcgg
    16681 ctacttccag gtcgtatggc cgctgaatcg tcagccggtg ccattgccga aagatatgtc
    16741 gctgtggccg tcggtggata tctttgtccc gacttacaac gaagatctca acgtggtgaa
    16801 aaataccatt tacgcctcgc tgggtatcga ctggccgaaa gacaaactga acatctggat
    16861 cctcgatgac ggcggcaggg aagagtttcg ccagtttgcg caaaacgtgg gggtgaaata
    16921 tatcgcccgc accactcatg aacatgcgaa agcgggcaac atcaacaatg cgctgaaata
    16981 tgccaaaggc gagttcgtat cgattttcga ctgcgaccac gtaccaacgc gatcgttcct
    17041 gcaaatgacc atgggctggt tcctgaaaga gaaacagctg gcgatgatgc agacgccgca
    17101 ccacttcttc tcgccggacc cgtttgaacg caacctgggg cgttttcgta aaacgccgaa
    17161 cgaaggcacg ctgttctatg gtctggtgca ggatggcaac gatatgtggg acgccacttt
    17221 cttctgcggt tcctgtgcag taattcgtcg caaaccattg gatgaaattg gcggtattgc
    17281 tgtcgaaacg gtaaccgaag atgcgcacac gtctctgcgc ctgcaccgtc gtggctacac
    17341 ctctgcatat atgcgtattc cgcaggcggc ggggctggcg accgaaagtc tgtcggcgca
    17401 tatcggtcag cgtattcgct gggcacgcgg gatggtgcaa atcttccgtc tcgataaccc
    17461 gcttaccggt aaagggctga aattcgccca gcggctgtgc tacgtcaacg ccatgttcca
    17521 cttcttgtcg ggcattccac gactgatctt cctgactgcg ccgctggcgt tcctgctgct
    17581 tcatgcctac atcatctatg cgccagcgtt gatgatcgcc ctgttcgtgc tgccgcatat
    17641 gatccatgcc agcctgacca actcgaagat ccagggcaaa tatcgccact ctttctggag
    17701 tgaaatctac gaaacggtgc tggcgtggta tatcgcacca ccgacgctgg tggcgctgat
    17761 taacccgcac aaaggcaaat ttaacgtcac cgccaaaggt ggactggtgg aagaagagta
    17821 cgtcgactgg gtgatctcgc ggccctacat cttccttgtt ctgctcaacc tggtgggtgt
    17881 tgcggtcggc atctggcgct acttctatgg cccgccaacc gagatgctca ccgtggtcgt
    17941 cagtatggtg tgggtgttct acaacctgat tgttcttggc ggcgcagttg cggtatcggt
    18001 agaaagcaaa caggtacgcc gatcgcaccg cgtggagatg acgatgcccg cggcaattgc
    18061 ccgcgaagat ggtcacctct tttcgtgtac cgttcaggat ttctccgacg gtggtttggg
    18121 gatcaagatc aacggtcagg cgcagattct ggaagggcag aaagtgaatc tgttgcttaa
    18181 acgcggtcag caggaatacg tcttcccgac ccaggtggcg cgcgtgatgg gtaatgaagt
    18241 tgggctgaaa ttaatgccgc tcaccaccca gcaacatatc gattttgtgc agtgtacgtt
    18301 tgcccgtgcg gatacatggg cgctctggca ggacagctac ccggaagata agccgctgga
    18361 aagtctgctg gatattctga agctcggctt ccgtggctac cgccatctgg cggagtttgc
    18421 gccttcttcg gtgaagggca tattccgtgt gctgacttct ctggtttcct gggttgtatc
    18481 gtttattctg cgccgcccgg agcggagcga aacggcacaa ccatcggatc aggctttggc
    18541 tcaacaatga tgataacgcg atgaaaagaa aactattctg gatttgtgca gtggctatgg
    18601 ggatgagtgc gttcccctct ttcatgacgc aggcgacgcc agcaacgcaa ccactgatca
    18661 atgctgagcc agctgtagcc gcccagacgg aacaaaatcc gcaggtgggg caagtgatgc
    18721 cgggcgtgca gggcgctgat gcgccagtcg tggcgcagaa cggtccttcg cgtgatgtga
    18781 agctgacctt tgcgcaaatt gcgcctccgc cgggcagcat ggtgctacgt ggcattaacc
    18841 cgaacggcag cattgagttt ggtatgcgca gcgatgaagt ggtgacgaag gcgatgctca
    18901 acctcgaata catgccatcg ccatcgttac tgcctgtcca gtcgcagtta aggtttatct
    18961 caatgatgag ctgatgggcg tactgccagt gaccaaagaa cagttgggta aaaaaacgct
    19021 ggcgcaaatg cccattaacc cactgtttat taccgacttc aaccgtgtgc ggctggagtt
    19081 tgtcggccat tatcaggacg tgtgcgaaaa cccggccaga accacgcttt ggctggatgt
    19141 tgggcggagc agtggactgg atctgaccta tcagaccctg aatgtgaaga atgacctgtc
    19201 acacttcccg gtgccattct ttgacccgcg cgataaccgt actaacacct tgccgatggt
    19261 ctttgcgggt gcgccggatg ttgggctgca acaagcatct gccattgtcg cctcgtggtt
    19321 tggttcgcgt tctggctggc gtgggcagaa cttcccggtg ctctataacc aactgccgga
    19381 tcgtaatgcc attgtctttg caaccaacga caaacggccg gacttcctgc gcgatcatcc
    19441 ggcggtaaaa gccccggtga ttgagatgat caaccatccg cagaatcctt acgtcaaact
    19501 gctggtggtg tttggtcgtg acgacaaaga cctgttgcag gcagcgaaag gtatcgctca
    19561 gggtaacatt ctgttccgtg gtgaaagcgt ggtagtgaat gaagtgaaac cgctgctacc
    19621 gcgtaagccg tacgatgcgc cgaactgggt acgtaccgat cgtccggtca catttggcga
    19681 actgaaaacc tatgaagaac agttacaatc cagcggtctt gagccagcag cgattaacgt
    19741 ttcgctaaac ctgccgccgg atctctacct gatgcgcagt accggcattg atatggatat
    19801 taattaccgc tacaccatgc cgccggtgaa agacagttcg cggatggata tcagcctgaa
    19861 taaccagttc ctgcaatcct tcaacctgag cagcaaacag gaggcgaacc gcctgctgct
    19921 gcggattccg gtattacaag gtttgctgga tggcaaaaca gatgtctcta ttccggcgct
    19981 gaaactgggc gcgaccaacc agctgcgctt cgactttgag tatatgaacc cgatgccggg
    20041 cggttcggtg gataactgta ttaccttcca gccggtgcag aatcatgtgg tgattggtga
    20101 cgactccacc atcgacttct cgaagtatta ccacttcatc ccgatgccgg atctacgcgc
    20161 ctttgctaac gcgggcttcc cattcagccg gatggcggat ctgtcgcaaa ccatcaccgt
    20221 gatgccgaaa gcgcctaacg aagcacagat ggaaacgttg ctgaatactg ttggttttat
    20281 cggcgcacag acgggcttcc cggcgattaa tctgacggtg accgatgatg gcagcaccat
    20341 tcagggcaaa gatgccgaca tcatgatcat cggtggtatc ccggacaaac tgaaagacga
    20401 taagcagatc gacctattgg tgcaggcgac cgaaagctgg gtgaaaacac cgatgcgcca
    20461 gaccccgttc cccggcattg tgccggacga gagcgatcgc gcggcagaaa cccggtcaac
    20521 gctgacctct tccggtgcga tggcggcggt gattggcttc cagtcgccgt ataacgacca
    20581 gcgcagcgtg attgcgctgt tggcagatag cccacgcggt tatgaaatgc ttaacgatgc
    20641 ggtgaacgat agcggcaaac gcgccaccat gttcggttcg gtcgcggtga tccgcgagtc
    20701 cggtatcaac agcctacgtg ttggcgacgt ttattacgta ggtcatctgc cgtggttcga
    20761 gcgcgtgtgg tatgcgctgg caaaccatcc gattctgctg gcggtgctgg cggctatcag
    20821 tgtgatattg ctggcatggg tactgtggcg tctgctgcga attattagtc gtcgtcgtct
    20881 taacccggat aacgagtaat tgaagatgaa tgtgttgcgt agtggaatcg tgacgatgct
    20941 gttgttggct gcctttagtg ttcaggcagc ctgtacctgg cctgcctggg agcagtttaa
    21001 aaaggattac atcagtcagg aagggcgcgt catcgacccc agcgacgcgc gcaaaatcac
    21061 cacctccgaa gggcaaagtt acggtatgtt ctttgccctg gcggctaacg accgtgcagc
    21121 tttcgataat attctcgact ggacgcagaa caatctcgct cagggttctt taaaagaacg
    21181 tttgcccgcc tggctgtggg gcaagaaaga gaacagtaag tgggaagtgc tggacagcaa
    21241 ttcggcctcc gatggtgatg tctggatggc ctggtcgttg ctggaggcgg ggcgtttgtg
    21301 gaaagagcag cgttataccg acatcggcag cgcgttgcta aaacgtatcg cgcgggagga
    21361 agtggtgacg gtgcctgggc tgggttccat gttgttaccg ggcaaagtgg gttttgctga
    21421 ggataacagc tggcgtttta accccagcta cctgccgccg acgctggcgc agtatttcac
    21481 ccgctttggc gcgccgtgga ctacgctgcg cgaaaccaat caacgtttat tgctggaaac
    21541 cgccccgaaa ggcttttcgc cagactgggt gcgttatgag aaagacaaag gctggcagct
    21601 aaaagccgaa aaaacattga tcagcagcta cgacgccatc cgcgtttaca tgtgggtagg
    21661 catgatgcct gacagcgatc cgcagaaagc gcggatgctc aaccggttta aaccgatggc
    21721 gacattcact gagaaaaacg gttatccgcc ggaaaaagtg gatgtggcta cggggaaagc
    21781 gcagggtaaa ggaccagtcg gtttttctgc cgccatgctg ccctttttac aaaaccgcga
    21841 tgcgcaggcc gttcagcgtc agcgcgtggc cgataacttt cccggcagcg atgcctatta
    21901 caactatgtg ctgaccctgt ttggacaagg ctgggatcaa caccgtttcc gcttctcgac
    21961 aaaaggtgag ttattacctg actggggcca ggaatgcgca aattcacact aaacatattc
    22021 acgctttccc tcggtctggc cgtcatgccg atggtcgagg cagcaccaac cgctcagcaa
    22081 cagttgctgg agcaagttcg gttaggcgaa gcgacccatc gtgaagatct ggtgcaacag
    22141 tcgttatatc ggctggaact tattgatccg aataacccgg acgtcgttgc cgcccgtttc
    22201 cgttctttgt tacgttaggg cgatattgat ggcgcgcaaa aacagctcga tcggctgtcg
    22261 cagttagcgc cgagttcaaa tgcgtataaa tcgtcgcgga ctacgatgct actttccacg
    22321 ccggatggtc gtcaggcact gcaacaggca cgattgcagg cgacgaccgg tcatgcagaa
    22381 gaagctgtgg cgagttacaa caaactgttc aacggtgcgc cgccggaagg tgacattgct
    22441 gtcgagtact ggagtacggt ggcgaaaatt ccggctcgcc gtggcgaagc gattaatcag
    22501 ttaaaacgca tcaatgcgga tgcaccgggc aatacgggcc tgcaaaacaa tctggcgcta
    22561 ttgctgttta gtagcgatcg ccgtgacgaa ggttttgccg tcctggaaca gatggcaaaa
    22621 tcgaacgccg ggcgcgaagg ggcctctaaa atctggtacg ggcagattaa agacatgccc
    22681 gtcagtgatg ccagtgtgtc ggcgctgaaa aaatatctct cgatctttag tgatggcgat
    22741 agcgtggcgg ctgcgcaatc gcaactggca gaacagcaaa aacagctggc cgatcctgct
    22801 ttccgcgctc gtgcgcaagg tttagcggcg gtggactctg gtatggcggg taaagccatt
    22861 cccgaactac aacaggcggt gcgggcgaac ccgaaagaca gtgaagctct gggggcgctg
    22921 ggccaggcgt attctcagaa aggcgatcgc gccaatgcag tggcgaatct ggaaaaagcc
    22981 ctcgcactgg acccgcacag cagcaacaac gacaaatgga acagtctgct gaaagtaaac
    23041 cgctactggc tggcgatcca gcagggcgat gctgcgctga aagccaataa tcctgaccgg
    23101 gcagaacgcc tgttccagca ggcgcgtaat gtcgataaca ccgacagtta tgcagtgctg
    23161 gggctgggcg atgtggcgat ggcgcgaaaa gattatcccg ccgccgaacg ttattatcag
    23221 cagaccttgc gtatggacag cggcaacact aacgccgtgc gcgggctggc aaatatttac
    23281 cgccagcaat cgccagaaaa agctgaagcg tttatcgcct cgctctctgc cagtcagcgg
    23341 cgtagcattg atgatatcga acgcagcctg caaaacgacc gtctggcaca gcaggcagag
    23401 gcactggaaa accagggcaa atgggcgccg gcggcagcac ttcagcggca acgactggcg
    23461 ctggaccccg gcagcgtatg gattacttac cgactttcgc aggatctctg gcaggccgga
    23521 caacgcagcc aggccgatac gttaatgcgc aatctggcgc agcagaagtc gaacgacccg
    23581 gagcaggttt acgcttacgg gctgtacctc tctggtcatg accaggacag agcggcgctg
    23641 gcgcatatca acagcctgcc gcgagcgcag tggaacagca atattcagga gctggttaat
    23701 cgactgcaaa gcgatcaggt gctggaaacc gctaatcgcc tgcgagaaag cggcaaagaa
    23761 gctgaagcgg aagcgatgct gcgtcagcaa ccaccttcca cgcgtattga cctcacgctg
    23821 gctgactggg cgcagcagcg acgtgattac accgccgccc gcgctgcata tcagaatgtc
    23881 ctgacgctgg agccaactaa cgccgatgcc attctggggc tgacggaagt ggatattgct
    23941 gccggtgaca cagcggcggc acgtagccag ctggcgaaac tgcccgctac cgataacgcc
    24001 tcgctgaaca cacagcggcg cgtggcgctg gcgcaggcgc agcttggaga taccgcagcg
    24061 gcgcagcaga cgtttaataa gttgatcccg caggcaaaat ctcagccacc gtcgatggaa
    24121 agcgcgatgg tgctgcgcga cggtgcgaag tttgaagcgc aggcgggcga tccaaagcag
    24181 gcgctggaaa cctacaaaga cgccatggtc gcatccggtg tgactacgac gcgtccgcag
    24241 gataacgaca cattcacccg actgacccgt aacgacgaga aagatgactg gctgaaacgc
    24301 ggcgtgcgca gcgatgcggc gggcctctat cgccagcagg atcttaacgt caccctcgag
    24361 cacgattact ggggttcgag cggcaccggt ggttactccg atctgaaagc gcacactacc
    24421 atgttgcagg tggatgcgcc gtattctgac gggcggatgt tctttcgcag tgatttcgtc
    24481 aatatgaacg tcggcagttt ctccactaat gccgatggca aatgggatga caactggggc
    24541 acctgtacat tacaggactg tagtggcaac cgcagccagt cggactccgg tgccagcgtg
    24601 gaggtcggct ggcgaaatga cgtctggagc tgggatatcg gtaccacgcc gatgggcttc
    24661 aacgtggtgg atgtggtcgg cggcatcagt tacagcgatg atatcgggcc gctgggttac
    24721 accgttaacg cccaccgtcg gcccatctcc agttctttgc tggcctttgg tgggcaaaaa
    24781 gactccccga gcaataccgg gaaaaaatgg ggtggcgtac gtgccgacgg tgtggggcta
    24841 agtctgagct acgataaagg tgaagcaaac ggcgtctggg catcgcttag tggcgaccag
    24901 ttaaccggta aaaatgtcga agataactgg cgcgtgcgct ggatgacggg ctattactat
    24961 aaggtcatta accagaacaa tcgccgcgtc acaatcggcc tgaacaacat gatctggcat
    25021 tacgacaaag atctgagtgg ctactcactc ggtcagggcg gttactacag tccgcaggaa
    25081 tacctgtcgt ttgctatacc ggtgatgtgg cgggagcgca cggaaaactg gtcgtgggag
    25141 ctgggggcgt ctggctcgtg gtcgcattca cgcaccaaaa ccatgccgcg ttatccgctg
    25201 atgaatctga tcccgaccga ctggcaggaa gaagctgcgc ggcaatccaa cgatggcggc
    25261 agcagtcagg gcttcggcta cacggcgcgg gcattacttg aacgacgtgt tacttccaac
    25321 tggtttgttg gcacggcaat tgatatccag caggcgaaag attacgcacc cagccatttc
    25381 ctgctctacg tacgttattc cgccgccgga tggcagggtg acatggattt accgccgcag
    25441 ccgctgatac cttacgccga ctggtaagtt ttcagatagc gcctctctta atgccgctgc
    25501 gatcgggtat actcgggcgg caatctggga tttccggggg gagacaattt gcgcgtaagt
    25561 cgctcgttaa caatcaagca gatggcaatg gtggcagccg ttgtcctggt gttcgttttt
    25621 attttttgca ccgttttgct gttccatctg gtccagcaga atcgctataa cacggctacg
    25681 caactggaaa gcattgctcg ctctgtacgc gaacccttat cttcagctat tttgaaaggc
    25741 gatattcccg aagcggaagc tattcttgcc agcattaaac cggcaggcgt ggtcagccgt
    25801 gccgatgtag tgctgcctaa ccagttccag gcgctgcgta aaagttttat tccagagcgc
    25861 ccggtgccgg taatggttac tcgcctgttt gagctaccgg ttcaaatctc gctgggcgtt
    25921 tactcgctcg aacgtccggc aaacccgcag ccaattgcct atctggtact acaggcggat
    25981 tccttccgta tgtataagtt cgtgatgagc accctctcaa cgttagtgac catttactta
    26041 cttttgtcgc ttatcctgac cgtcgccatc agctggtgca ttaaccgcct gattttgcat
    26101 ccgttacgca atattgctcg cgaacttaac gccatcccag cccaggagct tgttggtcac
    26161 caactggcat taccgcgtct gcatcaggac gatgaaatcg gtatgttggt gcgcagttac
    26221 aacctcaacc agcaattgct gcagcgccat tatgaagaac agaacgaaaa tgcgatgcgc
    26281 ttcccggtgt cggatttgcc gaacaaagcc ttgctgatgg agatgctgga gcaggttgtc
    26341 gcgcgtaaac aaaccaccgc gctgatgatc atcacctgtg aaaccctgcg tgatactgcg
    26401 ggcgtgctga aagaggcgca acgagaaatt ctgctgctga cgctggtgga aaaactcaaa
    26461 tcggtactgt cgccacgtat gatcctcgcg cagattagcg gttatgactt tgctgtcatt
    26521 gccaacggtg tacaggaacc gtggcacgca atcaccttag gtcagcaagt gctcactatc
    26581 ataagcgagc gcctgccgat tgaacgtatt caactccgtc cgcactgtag cattggcgtg
    26641 gcgatgttct acggcgatct caccgccgaa cagctttaca gtcgcgctat ttctgcggca
    26701 tttaccgctc gccataaagg caagaatcag attcagttct ttgatccgca gcagatggaa
    26761 gccgcccaga agcggttgac ggaagagagc gatatcctta atgcactgga aaatcatcag
    26821 tttgctattt ggttacagcc acaggtcgag atgaccagcg gtaaactggt cagtgcggaa
    26881 gtgttactgc gtatccagca accggatggc agttgggacc tgccggatgg cttaatcgat
    26941 cgcattgagt gctgtgggct gatggttacc gtcggtcact gggtgctgga agagtcctgt
    27001 cgattgcttg cagcctggca agagcgcggc attatgctgc ccttgtcggt aaacctctct
    27061 gcgctgcaac tgatgcaccc aaatatggtg gcggatatgc tggaactgtt aacccgctat
    27121 cgcattcaac cgggaacact gattctggaa gtgacagaaa gccgacgtat tgacgaccct
    27181 catgctgcgg tggcaatcct ccgtccgctg cgcaatgccg gagttcgggt ggcgctggat
    27241 gatttcggca tgggctacgc agggctgcgt cagctgcagc atatgaaatc gttgccaatc
    27301 gacgtactga aaatcgacaa aatgtttgtt gaaggcttgc cggaagatag cagcatgatt
    27361 gctgcaatta tcatgctggc gcagagcctg aacttacaaa tgattgccga aggcgtggag
    27421 actgaagcac aacgcgactg gctggcaaaa gcgggcgttg gtattgccca gggcttcctt
    27481 tttgctcgcc cactccctat tgaaatcttc gaagagagtt acctggaaga aaagtagcta
    27541 ccccaaactg attacaaaac tttaaaaagt gctggtttgt gcgagccagc tcaaactttt
    27601 taaccttttt gtttcaatta tgatccaggt acatttctgt gatgttgtct gggtgttatt
    27661 ttaaggccgc aggtacctca taaccttaca agacctgtag ttttactaaa ggacacccta
    27721 tgaaaacctc tctgtttaaa agcctttact ttcaggtcct gacagcgata gccattggta
    27781 ttctccttgg ccatttctat cctgaaatag gcgagcaaat gaaaccgctt ggcgacggct
    27841 tcgttaagct cattaagatg atcatcgctc ctgtcatctt ttgtaccgtc gtaacgggca
    27901 ttgcgggcat ggaaagcatg aaggcggtcg gtcgtaccgg cgcagtcgca ctgctttact
    27961 ttgaaattgt cagtaccatc gcgctgatta ttggtcttat catcgttaac gtcgtgcagc
    28021 ctggtgccgg aatgaacgtc gatccggcaa cgcttgatgc gaaagcggta gcggtttacg
    28081 ccgatcaggc gaaagaccag ggcattgtcg ccttcattat ggatgtcatc ccggtgagcg
    28141 tcattggcgc atttgccagc ggtaacattc tgcaggtgct gctgtttgcc gtactgtttg
    28201 gttttgcgct ccaccgtctg ggcagcaaag gccaactgat ttttaacgtg atcgaaagtt
    28261 tctcgcaggt catcttcggc atcatcaata tgatcatgcg tctggcacct attggtgcgt
    28321 tcggggcaat ggcgtttacc atcggtaaat acggcgtcgg cacactggtg caactggggc
    28381 agctgattat ctgtttctat attacctgta tcctgtttgt ggtgctggta ttgggttcaa
    28441 tcgctaaagc gactggtttc agtatcttca aatttatccg ctacatccgt gaagaactgc
    28501 tgattgtact ggggacttca tcttccgagt cggcgctgcc gcgtatgctc gacaagatgg
    28561 agaaactcgg ctgccgcaaa tcggtggtgg ggctggtcat cccgacaggc tactcgttta
    28621 accttgatgg cacatcgata tacctgacaa tggcggcggt gtttatcgcc caggccacta
    28681 acagtcagat ggatatcgtc caccaaatca cgctgttaat cgtgttgctg ctttcttcta
    28741 aaggggcggc aggggtaacg ggtagtggct ttatcgtgct ggcggcgacg ctctctgcgg
    28801 tgggccattt gccggtagcg ggtctggcgc tgatcctcgg tatcgaccgc tttatgtcag
    28861 aagctcgtgc gctgactaac ctggtcggta acggcgtagc gaccattgtc gttgctaagt
    28921 gggtgaaaga actggaccac aaaaaactgg acgatgtgct gaataatcgt gcgccggatg
    28981 gcaaaacgca cgaattatcc tcttaatctc accacttatg cccgcactcc cttccccgag
    29041 tgcgggtgtt tgcgcataat tgacccctgt gcctgaactt accacctggg tgagttcagg
    29101 tttatttcac ttcttccgtg acattttcat gttcttgcgg tctaacacga agtgttttta
    29161 acgtcattta gactgactga caacgggcag ttttttatta ccaggatagt tgatcagggg
    29221 ttcacatgca gggcacaaaa attcgacttt tagcgggcgg tttgctgatg atggccactg
    29281 ctggctatgt gcaggcagat gcgctccagc ctgatccagc atggcaacag gggacgcttt
    29341 ccaacggttt acagtggcaa gtgctgacca ccccccagcg tcccagcgat cgtgttgaaa
    29401 ttcgcctgct ggttaatacc ggttcgctcg ccgaaagtac acaacagagc ggttacagtc
    29461 acgccatccc tcgtattgcg ctaacgcaaa gcggtggcct tgacgcagca caggcgcgtt
    29521 cattgtggca gcaggggatc gaccctaaac gcccgatgcc gccggtaatt gtctcttatg
    29581 acaccacgct gtttaatctg agtttgccca ataaccgtaa cgatttgctg aaagaagcgc
    29641 tctcttatct ggcaaatgcc actggcaaat tgaccatcac accagaaacc atcaaccacg
    29701 cgctgcaaag tcaggacatg gtggcaacct ggcctgccga tactaaagag ggctggtggc
    29761 gctatcgtct gaaagggtca accttgttag gtcacgatcc tgccgatccg ctgaaacaac
    29821 ccgttgaagc ggaaaaaatt aaagatttct atcagaaatg gtacaccccg gatgcaatga
    29881 cgctactggt ggtgggaaac gtggatgcgc gctcggttgt cgaccaaatc aacaaaacgt
    29941 ttggcgaact gaaaggcaaa cgtgaaacgc cagctccggt gccgacgctt tctccgctgc
    30001 gtgcggaagc ggtgagtatt atgactgacg cggtgcgtca ggaccggtta tctatcatgt
    30061 gggatacgcc gtggcagccg attcgtgaat cagccgcact gctgcgctac tggcgtgcgg
    30121 acctggcccg cgaggcgctg ttctggcatg ttcagcaagc gttaagcgcc agtaacagca
    30181 aagacatcgg tcttggattt gactgccgtg tgctgtatct gcgtgcgcag tgtgccatca
    30241 acatcgaatc accaaacgac aagctgaaca gcaaccttaa tctggtggcg cgtgaactgg
    30301 cgaaggttcg cgataaaggt ctgccggaag aagagttcaa tgcgttagtg gcgcaaaaga
    30361 aactggagct gcagaaactg tttgccgcct atgcgcgggc tgataccgat attctgatgg
    30421 gtcagcggat gcgttcgttg caaaatcagg tcgtcgatat cgcgccggag cagtatcaga
    30481 aactgcggca ggatttcctt aacagcctga cggtggagat gttaaatcag gatctgcgtc
    30541 agcagttgtc gaatgatatg gcgttaatac tgctgcagcc gaaaggcgag ccggaattta
    30601 acatgaaagc gttgcaggcg gcctgggatc aaatcatggc cccatcgact gctgctgccg
    30661 ccacctctgt cgccacggat gacgtacatc ctgaagtgac ggatattcca cctgcacagt
    30721 aatgcctgat ggtgatgagt tagcacaacc atcaggtatt tatggatgag ctggatagag
    30781 gggtaacact ttatccagcc ttttgcatat gctgcgttta cgctggcatc gcctcacgcg
    30841 ggataatcgc gccgcgatac tgaataacgg tacttgcggt caggtgcccg cgtttcgccg
    30901 cgttttccgc actgccgccc gtcaaacgta ccgccagata accggcgctg aaagagtcgc
    30961 cagctgcggt ggtatcgatc actttttctt tcggcagttt caccgccgga acatccacta
    31021 acccttcgcc agcaatggac accaggcaag aatccgcccc gcgtttcacc accacttctt
    31081 tcacgcccgc gttatgggtg cgcgcaatga cgtcttccac cggctgttga ccccacagcg
    31141 cgtcttcatc gtccagcgtc aggaaggcga tatccgtgca ttccagcatt tgttggtaca
    31201 cctgctgtgt ctcttctttg ctggcccaca ggcgcggacg atagttattg tcgaaaatca
    31261 cttttccgcc gttggcgcgg cattcgcgca gcagggaaag cagcttttcg cggctggtcg
    31321 ggcttaagat cgccaggcta atcccgctca ggtagagata atcgaaattc gccagctctt
    31381 cgcaaatcgc cgtagactgc tcactctcca gccagaattt ggcggcggct tcgttccgcc
    31441 agtagtagaa cgtacgctcg ccggtgctgt cggtttcaat gtagtaaagg cccggcagac
    31501 ggttttccat ccgttgggtc agggaaatat caacgttctc gccgtgccag gcgtccagca
    31561 tctgctggct aaaactgtcc gttcccagcg ccgttacgta atgaacggtt aatgccgcag
    31621 gatcgacctg acgggcgata tagacggaag tgttcagggt atcgccgccg aaaccgcgct
    31681 taacgtccgc gcctttctcg gaaagctcaa tcatgcattc gccaatcacg gcaatctttt
    31741 tggacatagt cgtgaacctg atctgtaaaa aattagcgtt agtttgcgct gtggtggttt
    31801 gctggtcaac aatattaaaa cagtgttcca ttattttttt gagccagaac gtattcctga
    31861 aagattccgt tgtggagtga ggaaatttac cccggccagg cggtaaagtt ctgcccttac
    31921 gcgccgataa tctttgtcga gtccgggcag catcactttt aaacacagga catctttgat
    31981 gataaggcag gttatccagc gaataagcaa ccctgaagca agcatcgaga gcttgcagga
    32041 acggcgtttt tggttgcagt gtgagcgtgc ttacacctgg cagccgatct atcaaacatg
    32101 cgggcggtta atggccgtgg agctattaac ggtggtcacg catcccttga acccttcgca
    32161 acgcctgccg ccggatcgct attttactga aatcaccgtc agccatcgga tggaggttgt
    32221 gaaagagcag attgatttgc tggcgcaaaa agccgacttc tttatagagc acggcctgct
    32281 ggcatcggtc aatattgatg gccctacgct catcgccctg cgtcagcaac caaaaatcct
    32341 gcgccaaatt gagcgtcttc cctggctgcg tttcgaactg gtggagcata tccgtctgcc
    32401 gaaagattca acctttgcct cgatgtgtga atttggcccg ctgtggctgg gtgattttgg
    32461 taccgggatg gcaaatttct ctgcactaag tgaagtgcgt tatgactaca tcaaaatcgc
    32521 gcgagaactg tttgtgatgc tgcgtcagtc gccggaagga cgcacactct tttctcagct
    32581 tttacatcta atgaatcgct attgtcgcgg ggtgattgtt gagggcgtag aaacgccgga
    32641 agagtggcgt gatgtacaga actcgcccgc attcgccgca caaggctggt ttctttcacg
    32701 cccggcaccg atagaaacgc tgaatacggc ggttctggcg ctataagctg cctcattttc
    32761 cgcctggctg gactatcttt aggactggca caggaagaat atgaggaagc gaacgatgag
    32821 caaggcaggc aaaataactg ctgcgatttc aggggctttc ttgttgttga ttgtcgtggc
    32881 gatcattttg attgcaactt ttgactggaa tcgactcaaa ccgaccatca accagaaagt
    32941 ctctgcggag ttgaatcgtc cgttcgctat ccgtggcgat ctgggcgtgg tgtgggagcg
    33001 gcaaaaacaa gaaactggct ggcgcagctg ggtgccgtgg cctcatgtac atgcagaaga
    33061 catcattctt ggcaatccac cggatattcc cgaagtcacg atggtgcatt tgccgcgagt
    33121 agaggcaacg ctggcaccgc tggcgctgct gaccaaaacg gtctggctgc cgtggatcaa
    33181 gctcgaaaag cccgacgcgc gcctgattcg cctctccgaa aagaacaata actggacgtt
    33241 taatctcgcc aacgatgata acaaagacgc gaatgcaaag ccgtcggcat ggtcgtttcg
    33301 gctggataat attcttttcg atcaagggcg gatcgccatt gatgacaaag taagcaaagc
    33361 ggatctggaa atttttgttg atccgttagg caagccgctg ccgttcagcg aagttactgg
    33421 atcgaaaggt aaagcggata aagaaaaggt gggcgattac gtttttggcc tgaaggcgca
    33481 gggacgttat aacggtgaac agctcacggg tacgggaaaa ataggcggta tgctggcgct
    33541 gcgtggcgaa gggacgccgt ttccggtaca ggctgatttc cgttcaggta atacccgtgt
    33601 tgcttttgat ggcgtcgtga atgacccaat gaagatgggc ggtgtcgatt tacggcttaa
    33661 attttctggc gattcactgg gtgatctcta tgaactgacg ggcgttctgc tgcccgatac
    33721 cccgccgttt gaaacggatg gtcggctggt agcgaaaatc gacactgaaa aatcgtcggt
    33781 ctttgattat cgcggtttta atgggcgaat tggcgatagc gatatccacg gttctctggt
    33841 ctacaccacc ggaaagccgc gaccaaaact ggaaggtgat gtcgagtcgc ggcaattgcg
    33901 gctggcggac ctgggaccgt tgattggcgt tgattcgggg aaaggggcag aaaagtcgaa
    33961 acggtctgaa cagaagaagg gcgaaaaaag cgttcagcct gcgggcaaag tgctgcctta
    34021 tgaccgcttc gaaaccgata aatgggacgt tatggatgcc gatgttcgct tcaaaggccg
    34081 acgtatcgag catggcagta gcctgccgat tagcgatctt tctactcata tcatcctcaa
    34141 aaatgctgac ctgcgcctgc aaccgctgaa atttggcatg gcgggcggca gcattgcggc
    34201 gaatatccat ctggaaggcg ataaaaagcc gatgcagggg cgggcagata ttcaggctcg
    34261 tcgactgaaa ctgaaagaac tgatgcccga tgtggaactg atgcagaaga cgctggggga
    34321 aatgaacggt gacgcggaac tacgcggtag cggtaactcg gtggcggcgc ttttaggcaa
    34381 cagtaacggc aacctgaaac tgttgatgaa tgacgggctg gtgagccgca acctgatgga
    34441 gattgttggg ctgaatgtcg gcaactacat tgtcggtgcg atatttggtg acgatgaggt
    34501 gcgggtgaac tgcgcggcgg cgaatctgaa tattgccaac ggcgtagcgc gcccgcagat
    34561 ttttgctttc gatactgaga acgcgttgat taatgttacc ggcacggcaa gttttgcttc
    34621 ggaacagctg gatttgacta ttgatccgga gagtaaaggg attcggatta tcacactgcg
    34681 ttcgccgctg tatgtgcgtg ggacgtttaa aaatccgcag gctggggtga aagccggacc
    34741 gctgattgcc cgtggtgccg ttgcggcggc actggcaacg ctggtaacac cggcggcggc
    34801 gttattggca ctgatctcac cttccgaagg ggaggctaat cagtgtcgga cgatattgtc
    34861 gcagatgaag aagtgatgag gttggattgt gtttgctggt gagttcggga gcagcgtgtt
    34921 cccctcaccc taatcctctc cccaaagggg cgaggagact gttttgtgcg tgttgaaaca
    34981 acgagtaccg cttttccgtt cactttctgg gggagggctg ttatgttcgc gatataacat
    35041 ctcgctccgc ttttctccct ctccctttca gggagagggc tggggtgagg gtggctgccc
    35101 acacgatact tacaacgact gatgttgcgt ctcatgggtc agcagcaggg cgattaacgt
    35161 caagccagcc atcgccgcca gatataaccc caccgcacct aacccgtagt tagtctgcaa
    35221 ccaggctgcg atatacggcg caacggaagc cccgagaatc gacgatacgt tgtaagagaa
    35281 cgatgctccg gtgtaacgca cttctgtcgg gaacagctct ggtaacagcg cgcccatcgg
    35341 accgaaggtc agccccatca gacttaaccc cagcagcagg aaggcaaaaa ccagaatcgg
    35401 gttgccagaa ccgagcaaag ggttaaaggc gaatagcgcg aacaggatga gcagcgtggt
    35461 gatgattacc atgcttttac ggcgaccaaa ggcatcagcc agtaatccag cgactggcac
    35521 catcacgcca aaaccaataa ctgccatcat caacatccac aacacttcgt tacgcggcag
    35581 gccaagccca actggcgcgg cggcggtact aaaggtcatg gagtagaccg tcatgatgta
    35641 aaacagcgta taggttgcca gcataatgaa cgtacccagt acggttacgc gaacatgttt
    35701 ggtcagcagc gtacccagcg ggatcttcac ctgttttttc gctttagcga ctttctcaaa
    35761 caccggcgac tcatgcagcg acacgcgaac atacaggccg ataatgacca gcaccgccga
    35821 gaagataaat ggcacacgcc agccccagct cataaactgc tcgtcggtca gtagccagga
    35881 aagcagcaag aaagtgccgt tggcaaagaa gaagccaatc ggtgcgccca gctgcgggaa
    35941 ggagccgtac aatgcacgtt tgcgcggtgg ggcgttttca gtcgccagca gcgccgcgcc
    36001 gccccattca ccacctaagc ccagaccctg accaaatcga gccagcgcca gcagcagcgg
    36061 ggcgaaaata ccaatcgtgg catagcctgg cagcagacca atcaccacgg tcgaaatccc
    36121 catcgttagc aacgaggcga ccagcgtcgc tttacgccca acgcgatcgc caaaatgacc
    36181 aaaaacggca gagccaatgg ggcgcgcgac gaaggcgatg gcgaaggtgg cgagcgactg
    36241 tagcgttgct gccgtaggat cgccctgcgg gaagaagata tgcggaaaca caataacggc
    36301 cgcagtggcg taaatgtaaa agtcgaagaa ctcaatggct gtgccaatga gagaggcgac
    36361 aaggacttta ttacgcgagt tgatcggcgt gtattcttgc tcgtggtcga gtgttgtggc
    36421 tgttgcttgc ataatctttt cttatttttt ggctaacgaa tagccatatt acgcacagca
    36481 aaagcgatat ttcaatgtgt aacaaatcgc ggaaatggtc aaaaaccagg caaaaagggg
    36541 ataatgttta ggccagtgat ttttcttcta tgaaatgctt cacataattt tataaatagt
    36601 ggataaaact ggtttcaggt taaataaaag ttaccaactg gatttatatg ctggggttat
    36661 gagttagaat gaaattgttt gctcccaaat agatggctga agaggctctg gggacgagtt
    36721 tcaagaggtt atgtgcgcat tatagccgga tgcgatgctg gcgcatctta tccggcctac
    36781 ggggagccag gccgaataaa atcgtatgcc ggataaggcg tttacgccgc atccggccta
    36841 ttttaaggct gcgttttccc tagcattcgc gggtcgtctt tatattcggc ggtggcaatc
    36901 cacgccgcgc aaaacagcgt caaacgggcg aagaagtaga aaaatgccat cagccccagc
    36961 acggaaccaa atgctgcgcc agagggggat ttcatcagcg atggcagggt gtaggtcatc
    37021 acgattttaa tcacttcaaa accaatagca gccagaaatg ttccgcgaat cagggctttt
    37081 ttgcgcggac ggtggcgcgg caaccgccag aagatccaga agaaaagcag atagttggcg
    37141 aagatggaaa tcgccaggcc aatcaatcgc cacgtcggtt tcagccactc aatgctgttc
    37201 aggtgcaggg cgctaataat catttgctgc gccgaaccgg caaccgaggt gatcgaaagc
    37261 gtcacaatca gcgcaatcaa caaaccaatc agtgaaataa aatcacgcag atattttacc
    37321 cagaacttct cctgatcttg cggcgagcgt tcccagacat cacgcgactg ggcacgaatc
    37381 gcttcacgca ggttacccat ccagttgatg ccggaataaa gtgccaccgc caggccgaca
    37441 agccctacag tcgtacgctg ctgaacggcg gtgttgatgg tgtttttcaa cgtggcggct
    37501 agtgtcggat cgctgatgtt ttgcagaatt ttgtcgaaga tatcctgtag caacatcgga
    37561 tgggaggcca gcacaaagcc ccctgcggca aacgacacca tcaaaatcgg gatcatcgac
    37621 aaaaatgaga aataggtgat agccgcacca aactggttac ccagccgatc gttaaagcgt
    37681 tctgtcgcgc gaatcaggtg cgcaataacc ggttggcgtt ggactttttc ggcagtggtg
    37741 gtgacggttt ccagcgcctg gctaactttg ccgcctttct cgctattatc caactgctta
    37801 atcggctcga gctccagatc ctgggtggga cgtttgatct cgttttcctg cgtcatccgc
    37861 tcttttgtcc ttctgtcgtg gtcattctta aaaagtatag tcggtcagtc caggtgctct
    37921 ttcattacgc cagccagcca ctgcataaac aggtttacac gccgggaaag ctcccgacgc
    37981 tgcgggtaaa ccagcgaaag ggagagcggc tcggcacggt agccaggtaa tacttcaata
    38041 agccgcccgg cacgcagggc ttcgcgcacg gcaatgcgcg ggatctgaat aatccccaga
    38101 ccggcaagac cggcggcgag atagttttcg ctactattta ccgtcaacat gccgccagac
    38161 ttaaaccact ggacgccatt aacgctggca acctcaaaac ctaacggatg tacacccagg
    38221 tgcggtgtat aacgcactat tgcgtgtgaa gtcagatcat cggggctttg cggataacca
    38281 aagcgcgtca gatagtgcgg actggcacag ttgaccatgg tcagtttgcc gaggggacgg
    38341 gcgataacgc catcttccgg taacgcgcca gtgcgtatca cgcaatcaaa accatcatga
    38401 agaatatcta ccggacggtc atggctactc agttccagct caattcccgg atgcagatag
    38461 agaaattccg acaggcgcgg cagtaacagg tttttcgcga ttcctggcgg gatgtcgatg
    38521 cgtaatttac cgctgatact ggtggcatcc tgttgaaaca gaccgtccag ttcgttgaga
    38581 ttactcaaca catcttttgc ccgttgataa taggtcatgc cttctggcgt gagtttgacc
    38641 cgtcgcgtgg tgcgctggag aagctgggtg ccaagttgat gttccagtgc ctgtatctgg
    38701 cgcgaaacac ttccctttgg caaagcaaag aaatccgctg cgcgggaaaa actttccagc
    38761 tccgcgactt tgatgaacaa ctgcattgcg tgaattttat ccatttcttt gaccgattgt
    38821 tgttcacagc gaaacagtaa cgcgcatatc gcattgttta ttgttttttc taacatctaa
    38881 tgccgggttt cacaatgttg tcatgacgaa tgtggcgatt tctcagcagg aaaagggcgg
    38941 aatagcttta tgagaaaggt gaatcccctt aaacagagcg tatttttcag tgattccctt
    39001 taaagtgaat agaggacgta ttggctattt gtgcttattt ttgtctcatt gccatttgtt
    39061 attttggctt gtagtcgcgg aatttcattt ttaattgcat gcgtactaac caccaatata
    39121 aggaaatcct caaaattgtt ttaaatagtg ccctcgacat gtaatttcag gcgtttagct
    39181 gtaactattt atatcggtaa ctattttcta cgcgtcatct ctgtagaatg gccaccgcca
    39241 aatggcgaat tcttattttt tctcgcgggt aatacccttc cactacttaa gtctttttaa
    39301 catattcagg tggagattca gttatgcaaa tagtcatgtt tgacaggcag tcaatattta
    39361 ttcatggaat gaaaatcagt ttacagcagc gtattccagg ggtgagtatt cagggggcca
    39421 gtcaggcaga cgagttatgg caaaagctgg aaagttaccc tgaagcctta gttatgctcg
    39481 atggcgatca ggatggtgag ttttgctact ggttgctgca aaaaaccgtg gtgcagtttc
    39541 ctgaggttaa ggtgttaatc acggcgacgg attgcaataa acggtggtta caggaagtta
    39601 tccattttaa tgtgctggcc attgtgcctc gtgattcaac cgtcgagaca tttgcgttgg
    39661 cggtaaatag tgcggcgatg gggatgatgt ttctgcctgg agactggcgg acgacgccgg
    39721 aaaaggacat taaagatctc aaatcgttaa gcgcccgcca gcgggagatt ttaaccatgt
    39781 tagcggcggg cgagtcaaat aaggagatcg gcagaacgct gaatatcagt accggaacgg
    39841 taaaagcgca tctggaatcc ctgtatcgcc gtctggaagt gaaaaatcgc acccaggcgg
    39901 caatgatgtt aaatatctcc tcctgaagag gataatttta cagccagcag gaagttagcg
    39961 gctggctgta aaaatattat ggttcgccgt acaaaccaat taaacggcgt accacaccgt
    40021 tagtccagcc aaacccatcc tgcaacggat actcgccacc gccgccttcg cgtggaacac
    40081 catcggcaat atggtatttt tcgatcagtt tgtgctgttc cagatagaac tgattcaccg
    40141 tcttcagcca gcttcgcgcg atttcatcac ccagaaggtc atcgccgtac attttaaatc
    40201 cctgaatcgc catccattgt aacggtgccc agccgttggg tttatcccac tgttcaccgg
    40261 tttcgtactc gcttgccaga atcccgccag gtgtcagtaa ccgactgcgc acggcatttg
    40321 ccagacgatc ggcctgttca tggttcgcca taccgacata gagtggcaca atggcggcag
    40381 cggaaaacag cgccagttgt tcgcgtcgcc agtcgtaatc gcggtagatg ccgttttcat
    40441 catcccagag gtaacgcttt accgcatcgc gacgggcact ggccttctgg cggaacagtg
    40501 cttctgtctc tttctcgcct ttcagcgccg agatgttggc gatggcgctc tccagtttaa
    40561 acaggaaggc attcagatcg atggggatga actgggtggt acgaatactc gccagacgac
    40621 cagtatcacg cagccaacgg gaagagtaat cccaaccgga ggccgccccc gctcgtaaat
    40681 cgcggtacac ctcgttgggc gggcgaccag aatgtttcgc ggtttcaacg tcctcaagcc
    40741 aggattcgtc acgcggcgtg tcgcgatcgt cccagtaacg gttgagcagc gatccgtccg
    40801 gcatccgcac aacatggcga taggcctgat tagggatcaa cgattctgca ccgtccatcc
    40861 agaaggcata ttccattttc aggtggtcga gatagcggcg cgcaccgcgt acaccatctt
    40921 cttcaaacaa ctccaccatc agcgcaaaaa ccggtggttg cgagcggctc aaataatagg
    40981 tgcggttgcc gttggggatg tgaccgtagt tttcgatcat ccaggcgaag ttatcggcca
    41041 tgcatttcag caaatcttcc cgaccacttt ccgccagccc cagcatggtg aaataggaat
    41101 cccaatagta ggtttcgcta aaacggccgc ccgggacaat atatgactgc ggtagcgcca
    41161 gcagagaaga ccacggaatg tgatcctgtg gttcgcgggt tagcaccggc cacagctggt
    41221 cgatatgctc tttcagggaa ttttgcgggt ccgatacata ctcgctggag tagacctccg
    41281 gcagccagaa gtgattttca acaaacttgc gcaagtcaaa atcacgatga cggcgcactt
    41341 tacggtagcg gattaaaata tccagcgggt ccattttggg tgcgcagtcg ggaaaggttt
    41401 tactgtcggg gaaaattttc gccgactgaa catgctcgaa cagttcgaga tagcgatcgg
    41461 caggcgtcag cgcatcagag gcgggcagcc cttcaatcat ctcgggttcc ggttctgcct
    41521 cgatcatctc atccagtttt aattcatacg ggtccagttc atagcagaga tcgacttcga
    41581 tcatcagttc gtctggatta gggttttgaa ttttctgatt gagcataagg atccaacctc
    41641 cgaaattcgt cgctaattat cggcttttct ttaagggtag tcattcgctc cgcctggtgg
    41701 gcgacaaagc gtgcggtgga tcacgtttat taacttgtca aaaaatataa cgcactaata
    41761 tcaatggaat ttataaaaat acggatttgg tgttgttttt cattttcaga acattcaatc
    41821 ctgctctcgc cgcaatcatg atatgccatt cctgatctgg gtaataggca caggctatct
    41881 tattgatagt ttatattcat gtaattgatt gattcctatc aaaaagcgta tctccctgtt
    41941 ttttatgatg gctttgtctc gcagagacgt ttgcagcatt ctggaaaatt ttctgggtca
    42001 caataactca ccaccgtgag ggaagaataa tgaaaatggt ctcacgtatt accgcgatcg
    42061 gcctggctgg cgtcgcgatt tgctatttag ggttatctgg ttatgtgtgg taccacgata
    42121 ataaacgcag taaacaggcc gatgttcagg catctgctgt cagtgaaaat aataaggttt
    42181 taggctttct ccgcgaaaaa ggatgcgact attgccacac gccttcggca gaattacccg
    42241 cctattatta tattcctggc gcgaaacagt tgatggatta cgacattaag cttggatata
    42301 aatcttttaa cctcgaggcc gtgcgtgcgg cactgctggc tgataaaccc gtttcgcaaa
    42361 gcgatctgaa taagattgaa tgggtgatgc agtatgaaac tatgccacca acgcgttata
    42421 ccgcgctaca ctgggcgggt aaggtgagtg atgaagagcg ggcggaaata ctggcctgga
    42481 ttgcaaaaca gcgcgcggaa tattacgcca gcaatgatac tgctccggag catcgcaatg
    42541 aaccggtgca gcccatcccg caaaaactgc ctaccgatgc gcaaaaagtg gcgttgggct
    42601 ttgcgctgta tcacgatccc cgtttatcgg ctgatagcac catttcatgc gctcattgcc
    42661 atgcgttgaa tgcggggggc gtcgatggca gaaaaacatc gattggtgtt ggtggcgcag
    42721 ttgggccgat taacgcgccg acggtattta actcagtatt taacgttgag cagttctggg
    42781 atggtcgtgc ggcaacattg caggatcagg caggtggacc gccgttgaac ccgattgaaa
    42841 tggcgtcgaa atcctgggac gaaattattg ctaagctgga aaaagatccg cagcttaaag
    42901 cgcagttcct cgaagtttat ccgcaaggtt tcagtggcga aaatattact gatgccattg
    42961 ctgaatttga gaaaacatta attacgccgg attccccatt tgataaatgg ttgcgtggag
    43021 atgaaaatgc gctgacggcg caacagaaaa aaggctatca attatttaaa gataataaat
    43081 gtgcaacttg tcatggtggt attattctcg gcggacgttc ctttgaaccg ttggggctga
    43141 aaaaagactt taactttggg gaaattacgg cggcggatat tggtcgtatg aatgtgacta
    43201 aagaagagcg tgataaattg cgccagaaag tacccggttt acgtaacgtt gctttaacgg
    43261 caccgtactt ccatcgcggt gacgtgccga cgctggacgg ggcggtgaaa ctgatgctgc
    43321 gctatcaggt aggcaaagag ctgccgcagg aggatgtgga tgatatcgta gctttcctgc
    43381 acagtctgaa cggggtgtac acgccgtata tgcaggataa acaataacta atttgatcgc
    43441 ccgaacagga atgtttgggc gatttttatt acgataataa agtctgtttt taatattatc
    43501 atgttaaatg tttatattat aaaaagtcgt ttttctgctt aggattttgt tatttaaatt
    43561 aagcctgtaa tgccttgctt ccattgcgga taaatcctac ttttttattg ccttcaaata
    43621 aatttaagga gttcgaaatg gaccagaagc tgttaacgga tttccgctca gaactactcg
    43681 attcacgttt tggcgcaaag gccatttcta ctatcgcgga gtcaaaacga tttccgctgc
    43741 acgaaatgcg cgatgatgtc gcatttcaga ttatcaatga tgaattatat cttgatggca
    43801 acgctcgtca gaacttggcc actttctgcc agacctggga cgacgaaaac gtccataaat
    43861 tgatggattt gtcgatcaa
//
LOCUS       DADMIB010000011        42210 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.011, whole genome shotgun sequence.
ACCESSION   DADMIB010000011 DADMIB010000000
VERSION     DADMIB010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 42210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42210
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.011"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..415)
                     /gene="yeeE"
                     /locus_tag="JNZ89_000649"
     CDS             complement(<1..415)
                     /gene="yeeE"
                     /locus_tag="JNZ89_000649"
                     /inference="COORDINATES: protein motif:HMM:NF016064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
                     /protein_id="HAY8934609.1"
                     /translation="MTYEAGAFPWPGTVIGGYIFGLGIVLAGGCATGTWYRAGEGLIG
                     SWIALFTYMVMSAVMRSPHASGLNQTLQHYSTEHNSIAETFNLSVWPLVAVLLVITLW
                     VVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFV"
     gene            complement(425..607)
                     /locus_tag="JNZ89_000650"
     CDS             complement(425..607)
                     /locus_tag="JNZ89_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001467426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HAY8934610.1"
                     /translation="MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYA
                     LLIAISVQSVGVFALI"
     gene            complement(786..2144)
                     /gene="plaP"
                     /locus_tag="JNZ89_000651"
     CDS             complement(786..2144)
                     /gene="plaP"
                     /locus_tag="JNZ89_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PlaP"
                     /protein_id="HAY8934611.1"
                     /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
                     GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
                     LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIV
                     VLQVVLIAVILGMVVYRVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
                     GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI
                     MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
                     TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
                     DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED
                     VA"
     gene            complement(2134..2196)
                     /gene="yoeI"
                     /locus_tag="JNZ89_000652"
     CDS             complement(2134..2196)
                     /gene="yoeI"
                     /locus_tag="JNZ89_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YoeI"
                     /protein_id="HAY8934612.1"
                     /translation="MGQFFAYATVITVKENDHVA"
     gene            complement(2411..3340)
                     /locus_tag="JNZ89_000653"
     CDS             complement(2411..3340)
                     /locus_tag="JNZ89_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8934613.1"
                     /translation="MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESD
                     LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
                     FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
                     FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE
                     AITVFDFKTKLELQISGLGCGYLPRYLAQHFLDSGALIEKKVVAQTLFEPVWIGWNEQ
                     TAGLASGWWRDEILANSAIAGVYAKSDDGKSAI"
     gene            complement(3386..4210)
                     /locus_tag="JNZ89_000654"
     CDS             complement(3386..4210)
                     /locus_tag="JNZ89_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8934614.1"
                     /translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSG
                     IDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGSGDEFYLQAVQELVDSALAH
                     RIPRIIFTSSTSVYGDAQGMVKETTPRNPVTNSGLVLEELEDWLHNLPGTSVDILRLA
                     GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP
                     ARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE"
     gene            complement(4293..4547)
                     /gene="yoeB"
                     /locus_tag="JNZ89_000655"
                     /pseudo
     CDS             complement(4293..4547)
                     /gene="yoeB"
                     /locus_tag="JNZ89_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707909.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin YoeB"
     gene            complement(4544..4795)
                     /gene="yefM"
                     /locus_tag="JNZ89_000656"
     CDS             complement(4544..4795)
                     /gene="yefM"
                     /locus_tag="JNZ89_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoeB-YefM toxin-antitoxin system antitoxin YefM"
                     /protein_id="HAY8934615.1"
                     /translation="MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEE
                     YNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIE"
     gene            5078..5128
                     /gene="hisL"
                     /locus_tag="JNZ89_000657"
     CDS             5078..5128
                     /gene="hisL"
                     /locus_tag="JNZ89_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="his operon leader peptide"
                     /protein_id="HAY8934616.1"
                     /translation="MTRVQFKHHHHHHHPD"
     gene            5274..6173
                     /gene="hisG"
                     /locus_tag="JNZ89_000658"
     CDS             5274..6173
                     /gene="hisG"
                     /locus_tag="JNZ89_000658"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HAY8934617.1"
                     /translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
                     NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG
                     GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR
                     AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ
                     GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE
                     TMEKLKALGASSILVLPIEKMME"
     gene            6179..7483
                     /gene="hisD"
                     /locus_tag="JNZ89_000659"
     CDS             6179..7483
                     /gene="hisD"
                     /locus_tag="JNZ89_000659"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HAY8934618.1"
                     /translation="MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK
                     ARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQ
                     KLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLC
                     SPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK
                     RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAAD
                     MARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRN
                     ARDLVDGITSAGSVFLGDWSLESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
                     QELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA"
     gene            7480..8550
                     /gene="hisC"
                     /locus_tag="JNZ89_000660"
     CDS             7480..8550
                     /gene="hisC"
                     /locus_tag="JNZ89_000660"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HAY8934619.1"
                     /translation="MSIVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE
                     FQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDA
                     ILYCPPTYGMYGVSAETIGVECRTVPTLDNWQLDLQGISDKLEGVKVVYVCSPNNPTG
                     QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL
                     AGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAER
                     ECLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCL
                     RITVGTREESQRVIDALRAEQV"
     gene            8550..9617
                     /locus_tag="JNZ89_000661"
     CDS             8550..9617
                     /locus_tag="JNZ89_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase"
                     /protein_id="HAY8934620.1"
                     /translation="MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQ
                     KAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD
                     CRKPKVKLVERYLAEQAIDRANSYVIGDRATDIQLAENMGITGLRYDRETLNWPMIGE
                     QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEI
                     NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR
                     PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
                     RTLRQAIRVEGDTLPSSKGVL"
     gene            9617..10207
                     /gene="hisH"
                     /locus_tag="JNZ89_000662"
     CDS             9617..10207
                     /gene="hisH"
                     /locus_tag="JNZ89_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HAY8934621.1"
                     /translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFL
                     PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED
                     VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG
                     EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM"
     gene            10207..10944
                     /gene="hisA"
                     /locus_tag="JNZ89_000663"
     CDS             10207..10944
                     /gene="hisA"
                     /locus_tag="JNZ89_000663"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HAY8934622.1"
                     /translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYATQGAE
                     VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG
                     STAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY
                     LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTG
                     VRGVIVGRALLEGKFTVKEAIACWQNA"
     gene            10926..11702
                     /gene="hisF"
                     /locus_tag="JNZ89_000664"
     CDS             10926..11702
                     /gene="hisF"
                     /locus_tag="JNZ89_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015853929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HAY8934623.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA
                     DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI
                     NSPALADPTLITRLADRFGVQCIVVGIDTWYDAETGKYHVNQYTGDESRTRVTQWETL
                     DWVQEVQKRGAGEVVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE
                     AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC"
     gene            11696..12307
                     /locus_tag="JNZ89_000665"
     CDS             11696..12307
                     /locus_tag="JNZ89_000665"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HAY8934624.1"
                     /translation="MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDK
                     TIESGKVAFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLLLVNPIGPTCHKGTS
                     SCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA
                     ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ"
     gene            complement(12404..13381)
                     /gene="wzzB"
                     /locus_tag="JNZ89_000666"
     CDS             complement(12404..13381)
                     /gene="wzzB"
                     /locus_tag="JNZ89_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310855.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HAY8934625.1"
                     /translation="MRVENNNVSGQNHDPEQIDLIDLLVQLWRGKMTIIISVIVAIAL
                     AIGYLAVAKEKWTSTAIVTQPDVGQIAGYTNAMNVIYGSAVPKVSDIQASLIGRYSTA
                     FSALAETLDNQEEAEKLTIEPTVKNQSLPLAVSYVGETPEGAQKQLAKYIQQVDDQVN
                     EELGKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQ
                     QTEDVTQDTLFLLGSEALESMIKHEATRPLVFSPNYYQTRQNLLDIDNLDVDKLDIHA
                     YRYVMKPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK"
     gene            complement(13528..13620)
                     /locus_tag="JNZ89_000667"
                     /pseudo
     CDS             complement(13528..13620)
                     /locus_tag="JNZ89_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
     gene            13790..14794
                     /locus_tag="JNZ89_000668"
     CDS             13790..14794
                     /locus_tag="JNZ89_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015572392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HAY8934626.1"
                     /translation="MKFLVTGAAGFIGFYLSKRLLAAGHQVVGIDNLNDYYDVNLKQA
                     RLDLLKHDNFSFYKIDLADREKMAALFADERFERVINLAAQAGVRYSLENPNAYADAN
                     LIGFLNILEGCRHNNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANEL
                     MAHTYSHLYGLPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFT
                     YIDDIAEAIIRLQDVIPEKNPQWAVETGSPATSSAPYRVYNIGNSSPVELMDYINALE
                     EALGIEANKNMMPLQPGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWYRNFYKV
                     "
     gene            complement(14860..16026)
                     /gene="ugd"
                     /locus_tag="JNZ89_000669"
     CDS             complement(14860..16026)
                     /gene="ugd"
                     /locus_tag="JNZ89_000669"
                     /EC_number="1.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HAY8934627.1"
                     /translation="MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKRQSP
                     LVDKEIEEYLATKDLNFRATTDKYDAYKNADYVIIATPTDYDPKTNYFNTSSVEAVIR
                     DVTEINPNAVMIIKSTIPVGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVI
                     GEQSERAKRFAALLQEGAIKQDIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA
                     ESLGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAI
                     VDANRTRKDFIADSILARKPKVVGVYRLIMKNGSDNFRASSIQGIMKRIKAKGVPVIV
                     YEPAMKEDDFFRSRVVRDLDAFKQEADVIISNRMSADLADVADKVYTRDLFGND"
     gene            complement(16275..17681)
                     /gene="gndA"
                     /locus_tag="JNZ89_000670"
     CDS             complement(16275..17681)
                     /gene="gndA"
                     /locus_tag="JNZ89_000670"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HAY8934628.1"
                     /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIT
                     ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN
                     TFFHDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELIAPILTKIA
                     AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQT
                     FTEWNNGELSSYLIDITKDIFTKKDEEGNYLVDVILDEAANKGTGKWTSQSALDLGEP
                     LSLITESVFARYISSLKEQRVAASKVLSGPQAQPAGDNAEFIEKVRRALYLGKIVSYA
                     QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPY
                     FKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGA
                     HTYKRIDKEGVFHTEWLD"
     gene            complement(17786..18619)
                     /locus_tag="JNZ89_000671"
     CDS             complement(17786..18619)
                     /locus_tag="JNZ89_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001016535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HAY8934629.1"
                     /translation="MNHRLEKFSVLISIYKNDLPQFFEVALRSIFHDQTLKPDQIVIV
                     ADGELHQTHIDIINSFIDDVGNKIVTFVPLPRNVGLANALNEGLKACRNELVARMDAD
                     DISLPHRFEKQISFMINNSEIDVCGSFIDEIETVTEEFISTRKVPLEHREIVKFARKR
                     SAVSHPSVIFRKNTVLAVGGYPPFRKSQDFALWSLLIVHNARFANLPDILLKMRTGRN
                     LMARRGLSYLLYEYKVLYYQYKIGFIRKNELISNAMLRTFFRIMPSKLKELMYSIVRN
                     R"
     gene            complement(18616..19485)
                     /locus_tag="JNZ89_000672"
     CDS             complement(18616..19485)
                     /locus_tag="JNZ89_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000381997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HAY8934630.1"
                     /translation="MDTVYAVLVAYNPEHNDLKNAVELLLRQVTKVVVCNNSTNGYKY
                     AENSSGDVKIFNFNDNLGIAEAQSIGMKWAFENGADFILQMDQDSIPDPKMVEQLLTC
                     YKKLLKQNVNVGLVGSQDFDKVTGELNKARVKKGKPLTEVYYEVDSTLSSGSLIPKNS
                     WLIVGGMKDELFIDAVDHEYCWRLRAAGFKVIRNKNALLAHRLGDGRFKILNILSVGL
                     PSPFRHYYATRNIFLLLNKNYVPIYWKISSLVKLIGKVFLYPIFLPNGNKRLYFFLKG
                     INDGLMGRSGKMK"
     gene            complement(19502..20689)
                     /gene="wzy"
                     /locus_tag="JNZ89_000673"
     CDS             complement(19502..20689)
                     /gene="wzy"
                     /locus_tag="JNZ89_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O147 family O-antigen polymerase"
                     /protein_id="HAY8934631.1"
                     /translation="MTSDFYNSKDKSLSVLLFFGFIFFLTRSFPFIQYSWIMEGFLCL
                     CIMSFTKKIANGIYHYPVILIFLLALFINFIYSYIKGNDIAIIIRFYIIILFILCAYF
                     CSYGTISIVKIFLYLMVLQAVIISIISIYMTKTYGIGDYSALRHYFLENDYGDVYTYG
                     SGFYRVQIKGNALIPFAFMLHIVIKDYFYYRFKNTITVILAIGTIVAGNFAYFVSICL
                     FFMYIILCSKSNSRYAKLRKIIFGVFLTVILPFFITYSIELIIMKSNGADSSLGVRWD
                     QFTVLINDLTESVSNFVIGSGLGNVIKIQTPIRDYSAYIYYELQSVYFLNQLGVILFT
                     LFLLINLLLTIKIIKYSELCVLYFLYVSYAITNPYILDSNHVAVIIVLVTLSNVLKKM
                     KAK"
     gene            complement(20745..21977)
                     /gene="wzx"
                     /locus_tag="JNZ89_000674"
     CDS             complement(20745..21977)
                     /gene="wzx"
                     /locus_tag="JNZ89_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000029423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O147 family O-antigen flippase"
                     /protein_id="HAY8934632.1"
                     /translation="MSIVKNTLWNISGYIIPSLIAIPALGILSRILGTEQFGLFTLAI
                     ALVGYASIFDAGLTRAVIREVSIYKNVHKELRAIISTSTVILTILGLIGGSVLFLSSN
                     VIVKLLNINANHVVESVKAIYIISATIPLYLLNQVWLGIFEGMEKFRKVNLIKSINNS
                     FVAGLPVIFCFFHGGLLSAIYGLVMARVLSLIVTFIFSRKLIISSGLSVKIVTVKRLI
                     GFGSWITVSNIISPIMTYMDRFILSHIVGADKVSFYTAPSEGIQRLTILPSALSRAIF
                     PRLSSELQSVKQTKILSYFIMVIGILPIVMLIIILSDFIMSAWMGPTYHGTPGIVLKI
                     LAIGFFFNCIAQIPFVSVQASGRSKITAIIHLLEVIPYLCILYIFIYHWGIVGAAIAW
                     SVRTSLDFLILLLIDTKY"
     gene            complement(21974..22531)
                     /gene="rfbC"
                     /locus_tag="JNZ89_000675"
     CDS             complement(21974..22531)
                     /gene="rfbC"
                     /locus_tag="JNZ89_000675"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001100798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HAY8934633.1"
                     /translation="MNVIKTEIPDVLIFEPKVFGDERGFFMESFNQKVFEGAVGRKVE
                     FVQDNHSKSSKGVLRGLHYQLEPYAQGKLVRCVVGEVFDVAVDIRKSSPTFGKWVGVN
                     LSAENKRQLWIPEGFAHGFLVLSETAEFLYKTTNYYHPDSDRGIVWNDPILSIKWPTI
                     EHNNYILSIKDARAKELHNMKELFL"
     gene            complement(22536..23414)
                     /gene="rfbA"
                     /locus_tag="JNZ89_000676"
     CDS             complement(22536..23414)
                     /gene="rfbA"
                     /locus_tag="JNZ89_000676"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HAY8934634.1"
                     /translation="MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL
                     MLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPTPDGLAQAFIIGEEFIGG
                     DDCALVLGDNIFYGHDLPKLMDVAVNKESGATVFAYHVNDPERYGVVEFDKNGTAISL
                     EEKPLQPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMM
                     GRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAYRKGFIDAEQVKALAEPL
                     KKNAYGQYLLKMIKGY"
     gene            complement(23472..24371)
                     /gene="rfbD"
                     /locus_tag="JNZ89_000677"
     CDS             complement(23472..24371)
                     /gene="rfbD"
                     /locus_tag="JNZ89_000677"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HAY8934635.1"
                     /translation="MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPE
                     GVAETVKRIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVESIAKEANEVGAWVIHY
                     STDYVFPGNGDTPWLETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAAKGN
                     NFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAS
                     GTTTWHDYAALVFEEARKAGIPLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFA
                     LVLPDWQVGVKRMLNELITTTAI"
     gene            complement(24371..25456)
                     /gene="rfbB"
                     /locus_tag="JNZ89_000678"
     CDS             complement(24371..25456)
                     /gene="rfbB"
                     /locus_tag="JNZ89_000678"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HAY8934636.1"
                     /translation="MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA
                     DVSDSERYVFEHADICDAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIV
                     GTYVLLEAARNYWSALDSDKKTRFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTA
                     YAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG
                     KALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAGETYNIGGHNEKKNIDVVLTICDL
                     LDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKISRELGWKPQETFESGIRKTLEWY
                     LSNTKWVDNVKSGAYQSWIEQNYEGRQ"
     gene            complement(25829..26722)
                     /gene="galF"
                     /locus_tag="JNZ89_000679"
     CDS             complement(25829..26722)
                     /gene="galF"
                     /locus_tag="JNZ89_000679"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalF"
                     /protein_id="HAY8934637.1"
                     /translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
                     VAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV
                     RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
                     QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLS
                     ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
                     GLRNLKEGAKFRKGIEKLLSE"
     gene            complement(26954..27949)
                     /locus_tag="JNZ89_000680"
     CDS             complement(26954..27949)
                     /locus_tag="JNZ89_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8934638.1"
                     /translation="MNNNVLLIGASGFVGTRLLETAIADFNIKNLDKRQSHFYPEITQ
                     IGDVRDQQALDQALAGFDTVVLLAAEHRDDVSPTSLYYDVNVQGTRNVLAAMEKNGVK
                     NIIFTSSVAVYGLNKHNPDENHPHDPFNHYGKSKWQAEEVLCEWYNKAPTERSLTIIR
                     PTVIFGERNRGNVYNLLKQIAGGKFMMVGAGTNYKSMAYVGNIVEFIKYKLKNVAAGY
                     EVYNYVDKPDLNMNQLVAEVEQSLNKKIPSMHLPYPLGMLGGYCFDILSKITGKKYAV
                     SSVRVKKFCATTQFDATKVHSSGFVAPYTLSQGLDRTLQYEFVHAKKDDITFVSE"
     gene            complement(28107..29501)
                     /gene="wcaM"
                     /locus_tag="JNZ89_000681"
     CDS             complement(28107..29501)
                     /gene="wcaM"
                     /locus_tag="JNZ89_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis protein WcaM"
                     /protein_id="HAY8934639.1"
                     /translation="MPFKTLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHD
                     WIASFKQAFSEGHTVVVPAGLVCDNINTGIFIPPGKTLHILGSLRGNGRGRFVLQDGS
                     QVTGEEGGSMHNITLDVRGSDCTIKGLAMSGFGPVTQIYIGGKNKRVMSNLTIDNLTV
                     SHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCT
                     NGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIK
                     ARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNF
                     RVNNIQLDNTHLVYKLRGIQISAGNAVSFVALTNIEMKRASLELHNKPQHLFMRNIKV
                     MQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAMNERGQSSVDIDRINHHIV
                     NVEKINFRLPERRE"
     gene            complement(29512..30732)
                     /gene="wcaL"
                     /locus_tag="JNZ89_000682"
     CDS             complement(29512..30732)
                     /gene="wcaL"
                     /locus_tag="JNZ89_000682"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HAY8934640.1"
                     /translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEILALQKGDTQN
                     THAAWTKYNLAARTHWLQDEPTGKIAKLRHRASQTLRGIYRKNTWQALNLKRYGAESR
                     NLILSAICGQVATPLHADVFIAHFGPAGVTAAKLRELGVIRGKIATIFHGIDISSREV
                     LNHYTPEYQQLFRRGDLMLPISDLWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKA
                     PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQ
                     LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST
                     LHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLGTDELAPVVKRAREKVEHDFNQ
                     QVINRELASLLQAL"
     gene            complement(30729..32009)
                     /gene="wcaK"
                     /locus_tag="JNZ89_000683"
     CDS             complement(30729..32009)
                     /gene="wcaK"
                     /locus_tag="JNZ89_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis pyruvyl transferase
                     WcaK"
                     /protein_id="HAY8934641.1"
                     /translation="MKLLILGNHTCGNRGDSAILRGLLDAINILNPQAEVDVMSRYPV
                     SSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNI
                     AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP
                     FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVEHGVDTAWLVDHHTEDF
                     TASYAVQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRILDEGYQV
                     IALSTCTGIDSYNKDDRMMALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGT
                     RLHSAIISMNFATPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ
                     LPALNARLSEAVSRERQTGMQMVQSVLERIGEVK"
     gene            complement(32285..33763)
                     /gene="wzxC"
                     /locus_tag="JNZ89_000684"
     CDS             complement(32285..33763)
                     /gene="wzxC"
                     /locus_tag="JNZ89_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M-antigen undecaprenyl disphosphate flippase"
                     /protein_id="HAY8934642.1"
                     /translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL
                     TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGLVVCLAVFLLSDLI
                     GDVLNNPDLAPLIKTLSLAFVVIPQGQQFRALMQKELEFNKIGMIETSAVLAGFTFTV
                     VSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTA
                     DSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ
                     DDTEKLRINFYKPLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQFLCVVG
                     LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI
                     INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA
                     VQIAAGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG"
     gene            complement(33765..35105)
                     /gene="wcaJ"
                     /locus_tag="JNZ89_000685"
     CDS             complement(33765..35105)
                     /gene="wcaJ"
                     /locus_tag="JNZ89_000685"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HAY8934643.1"
                     /translation="MVQRFSDITIMFAGLWLVCEVSGLSFLYMHLLVALITLVVFQML
                     GGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFNNDFDTQLKIWLAWYGLTS
                     IGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYH
                     DPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLL
                     IPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRAEDIVLATLILLLISPVLC
                     CIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVMENDKVVTQATQNDPRVTKV
                     GNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYRQLIEGYMLRHKVKPCITG
                     WAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIVFLTVFKGFVNKAAY"
     gene            complement(35210..36580)
                     /gene="cpsG"
                     /locus_tag="JNZ89_000686"
     CDS             complement(35210..36580)
                     /gene="cpsG"
                     /locus_tag="JNZ89_000686"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase CpsG"
                     /protein_id="HAY8934644.1"
                     /translation="MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLG
                     GDVRLTSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
                     DYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF
                     GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIP
                     NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
                     KNPGAKIIHDPRLSWNTVDVVTAAGGTSVMSKTGHAFIKERMRKEDAIYGGEMSAHHY
                     FRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLAQPVEAINR
                     VEQHFSRDALAVDRTDGISMTFADWRFNLRSSNTEPVVRLNVESRGDVPLMEARTRTL
                     LTLLNE"
     gene            complement(36773..38209)
                     /gene="cpsB"
                     /locus_tag="JNZ89_000687"
     CDS             complement(36773..38209)
                     /gene="cpsB"
                     /locus_tag="JNZ89_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanyltransferase"
                     /protein_id="HAY8934645.1"
                     /translation="MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
                     ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
                     KRHSPENDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY
                     IRRGEVSAGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELK
                     KYRPDILDACEKAMSSVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAG
                     WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK
                     DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV
                     KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKI
                     PLDLIEVRSGSYLEEDDVVRFADRYGRV"
     gene            complement(38212..39435)
                     /gene="wcaI"
                     /locus_tag="JNZ89_000688"
                     /pseudo
     CDS             complement(38212..39435)
                     /gene="wcaI"
                     /locus_tag="JNZ89_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310882.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis fucosyltransferase
                     WcaI"
     gene            complement(39432..39911)
                     /locus_tag="JNZ89_000689"
     CDS             complement(39432..39911)
                     /locus_tag="JNZ89_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose mannosyl hydrolase"
                     /protein_id="HAY8934646.1"
                     /translation="MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLPGKRTNRPAQGY
                     WFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHY
                     VVLGFRFRVAEEELLLPDEQHDDYRWLTPDALLASDNVHANSRAYFLAEKRAGVPGL"
     gene            complement(39914..40879)
                     /gene="fcl"
                     /locus_tag="JNZ89_000690"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
     CDS             complement(39914..40879)
                     /gene="fcl"
                     /locus_tag="JNZ89_000690"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
                     /EC_number="1.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HAY8934647.1"
                     /translation="MSKQRIFIAGHRGMVGSAIKRQLEQRGDVELVLRTRDELNLLDS
                     RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL
                     LFLGSSCIYPKLAKQPMAESELLQSTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS
                     VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA
                     AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK
                     PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRG"
     gene            complement(40882..42003)
                     /gene="gmd"
                     /locus_tag="JNZ89_000691"
     CDS             complement(40882..42003)
                     /gene="gmd"
                     /locus_tag="JNZ89_000691"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HAY8934648.1"
                     /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
                     DHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYT
                     ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
                     KLYAYWITVNYCESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
                     GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIVTGVQYSVRQFVEMAAAQLGIKLRF
                     EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLDDPTKAHEKLGWK
                     PEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES"
     gene            complement(42029..42202)
                     /locus_tag="JNZ89_000692"
     CDS             complement(42029..42202)
                     /locus_tag="JNZ89_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005113733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase"
                     /protein_id="HAY8934649.1"
                     /translation="MIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKSLPVNVVCRG
                     NPAVVIRERVETE"
BASE COUNT        11056 a        10725 c         9742 g        10687 t
ORIGIN      
        1 tgacaaaggg atgccagcgt ttttcaaaca gaatatgagc gatcccggtt cggcgcggcg
       61 gtaaggtcgc gactttgagt tttggcttct tcaactcttt catcaccacc cagagcgtta
      121 tcaccagcaa aacggcaacc aacggccaca cagacaaatt aaaagtctca gcaatagagt
      181 tatgttcagt actgtagtgc tgcaaggttt gatttaaacc actggcatgt ggagaacgca
      241 tcaccgcact catcaccata taagtgaaaa gcgcgatcca actgccgatc aatccctcac
      301 ccgcgcgata ccaggtcccg gtggcacatc cacccgccag aacaattccc agcccgaaga
      361 tatacccacc tataacagta ccaggccacg ggaacgcccc ggcttcgtaa gtcagtaggc
      421 ccgcctaaat taacgcaaaa acccccacac tttgtaccga aattgcaatc agcaaggcgt
      481 aaaacatgcg attatttttc gcgatataca tatcgcgaaa accaccagtc aggcaaaaac
      541 gcccacgctg catgacaaat cccagcagag caccacaaat tagcccgctt aatatcattg
      601 aaaacataaa ttaattaacc agatgaatgt taatgaggaa attattcatg actggtggaa
      661 tgcagaccaa taaccaaatt ctctaaatta gaacaaatgg ttcttaatga ggatttcgat
      721 aaaaaagaat aaaaaaaccg gagccaaata ttcattcgac tccggttgat tattagaaaa
      781 gatgattatg ctacgtcttc gtactgcgga accgggttac ggaagctctt ggtgacgcaa
      841 gccaggtaaa tcagaccgat agcagcccag atcagaccca gaaccattga gctttcttcc
      901 aggttaaccc acagcgcacc aacggtcagc gcaccacaca tcggcaggaa cagatactgg
      961 aagtgatctt tcagcgtctt attacgcttc tcacggatcc agaactgcga gatgaccgac
     1021 aggttaacga aggtgaacgc caccagcgca ccaaagttaa tcagcgccgt tgccattacc
     1081 aggtcgaagt tgattgccag cagggcaatc gcgccaacca ggatgatgtt catcgccgga
     1141 gtacgccatt tcgggtgtac ataaccgaag aagcttttcg ggaatacgcc gtcacgaccc
     1201 attacgtaca tcagacgcgc tacgcctgca tgcgccgcca taccggacgc cagtacggta
     1261 atggtggaga agatcagcgc gccaacctgg aacgctttac ccgcaacgta cagcatgatt
     1321 tcaggctgtg acgcatccgg atctttaaag cgagagatat ccgggaagta cagctgcagg
     1381 aagtaagttg caaagatgaa gatcatgccg ccgatcagcg cggtcaggaa aatcgcacgc
     1441 gggatcacgc gctctgcatc tttggtttct tccgacaggt tgctgatgcc gtcaaagccg
     1501 gtaaaggaga agcacaggat tgtcgccccg gtaatcatcg ggataacatg cgcatcgcca
     1561 gaccagaatg gacgagtgct cgccagcgta ccagcgcctt caccttcaaa tacgcgataa
     1621 acaaccatgc ccagaatcac cgcgatcagc accacctgca acacgacgat tacagtgttg
     1681 aagttcgcta cggatttcag actacgcagg ttaaaggcgg tcatgaaggc caccaacgcc
     1741 accacaaaca tccacgatgg gatggaaggc accagagctt caaaatagat tttcgccagc
     1801 agaatgttga tcatcggcgc gaacagatag tcgagcagag aagaccaacc caccataaag
     1861 ccgacagtcg ggctaatgga tttctgggcg taagtgtatg cagagccagc agaaggatag
     1921 cggcgaacca gcttcccgta gctcagagcc gtaaacagga tcgcaatcaa tgcgaacgca
     1981 taggctgtcg gcacatgacc atccgtgagg cctgaaacga taccaaaagt atcaaacagc
     2041 gtcatcggct gcatataggc aagacccatc attacaaccg gaactaacgt aagcgtttta
     2101 cgcaattcca cgcgagaggt gtttggagta acgttatgcg acatggtcat tctcctttac
     2161 ggtgataacc gtcgcgtaag caaaaaattg ccccattttt ttggattcct cagcgacaac
     2221 aactgtcgat ttttagtaaa tatctatccg gtacgaagcc cggcctcttg gtatgaatga
     2281 ttggtttgaa gcaaaaaata accgacgctg atgaaacgtc ggtttttagt cattttttga
     2341 cagcggcgca ttgtgcctaa atggggggga aatgacaaga gaatgagagg cttgtcataa
     2401 taatttttct ttaaatggct gattttccgt catcagattt tgcataaaca ccggcgatcg
     2461 cactatttgc taaaatttca tcccgccacc agccactggc aagtcctgcg gtctgttcat
     2521 tccagccaat ccagacgggt tcaaagagag tttgggcgac cactttcttc tcgattaacg
     2581 cgccactatc gagaaaatgt tgcgccagat aacggggtaa atagccgcag ccgaggccgc
     2641 taatttgcag ctccagcttg gttttaaaat cgaaaacggt aatggcttct tgttcgtcga
     2701 gaagttgtga ggccgtagaa gcgcctgcct gcgcagtatc ccccaccaca atcgcccgat
     2761 atcgcttaat aatacgacga tttaacggct cttcttccag ggctaacgga tgatgaggcg
     2821 cgaccgcaaa gacttgttcc agatcgccca accgtgaaaa accaaactca ctggaagatg
     2881 gtggctcatg catcgcgcca acaataatat ccgctcgccc ctgagtcagg gcatcccatg
     2941 aaccacccag tacgccattg ataaacttca ggcgcgtcac gctatgatgt tgataaaaag
     3001 cttcaatcag tggcgctagc agagaaaaag gaaacgtgtc gtccacgcca atcaccagct
     3061 cgttttccca gccttcatgc agtttgatcg cctgcttttc cagttcccgc acggtatgca
     3121 gaacttcccg ccctttctct aataacattt ttccggtgcg ggtgaattta gcgcggtgac
     3181 cgctacgatc aagcaattga atattaaggt cgctttccag cttgtgaacg gtgtaactca
     3241 gagcggacgg cgtcttgtag agtttggccg acgccgccgc aaaactgcct tctttttcta
     3301 aggcatcgag gatcatcaac acatccagca gtggtttcat acacgccccc ttgcagtgta
     3361 tgcggcgtcc tgctggcgtg atcgtttact ccagcggcat taccagcgga tcgggatact
     3421 ggtattcaaa tcccagttca ttacaaatcc gactgccatc aataatctta cctttgccgc
     3481 tgtccagact atttctgaac tgcggaggtt ccagccccag taaacgggcc atctgcggat
     3541 agaaaacatt acgcgcaggg tgagctggcg cacatatatt atagatgtgt ccgcctttag
     3601 gtgcctgtaa caacagagtg atagcgccaa taacatcttc taaatggact aaattaacac
     3661 catgttcacc atcaggcgcg gtttttccgg caaagaagcg tccgggatga cgccccggtc
     3721 cgaccaggcc cgcaagacgc agaatatcga ccgaagtacc gggtaaattg tgcagccagt
     3781 cttcgagttc ttctaatact agtccactgt tggttaccgg attacgcggg gtagtttctt
     3841 tcaccatgcc ttgcgcatcg ccatagacag atgttgagct ggtaaaaata attcggggaa
     3901 tacgatgggc cagcgcgcta tccactaact cttgtaccgc ttgtaaatag aactcatcgc
     3961 cggagccgct acgacgtgcc ggaagcgtaa tgaccagtgc atcggcatcc atcagggcat
     4021 ccagatcgtc agaatcgcaa actaactcag gctccatgcg aagcagatag ctatcaatgc
     4081 cactcattcg ggccgcttcg acaccatctt gtgtggtttt actcccggtg acttgccagc
     4141 ctcgcgctga aagtgacatc gccagcggca tgcctaacca ccctaacccg acaattgcga
     4201 cctttttcat ccgttatctc ctgatacacc ttagatctat aaggctacgc tagcgtatca
     4261 aaactgacaa ttcattctat gaatgaatct gttcaataat gataacgaca tgctgcaatg
     4321 agcagtgaat cgtcggtaac cgcgtatacc agacggtgct cctctgtaat gcgtcgggac
     4381 tagaaacctg acaaattatg tttcaggggt tctggcttcc ccttaccttc aaatggcgtt
     4441 ctgcgggtat ctttgataag ttcattgatc tttttaacaa ttcgcttatc tgtttcctgc
     4501 cagtacagat aatcatccca tgattcctca gaccagatta gtttcactca ataatgtcct
     4561 tttctgttcc tttgcctgat ttcaggctat cgattgagtc catcaatctc cgggcgttag
     4621 cgggggaacg cagtagataa gccgtctctt ccagcgagtt gtattcttcg agtgacatca
     4681 gaacacaagc ctctccattc tgacgagtaa taaggatcgg ggcatgatct tcaacggctt
     4741 tcatcattgt tgccgacaaa ttctgacgcg cttcgctgta gctaattgta cgcatgtcaa
     4801 tctcctcttt tgtacagttc attgtacaat gatgggcgtt aattaactat ttattaatta
     4861 gtttgtagat caaggtattg tcagtgagac gaaaatccag gcttcgctat ttttggtgcc
     4921 gtcagcttag aggacagtcc tcttagcccc ctcctttccc cgctcattca ttaaacaaat
     4981 ccatcgccat agaatatata aaaaagccct tgctttctaa cgtgaaagtg gtttaggtta
     5041 aaagacatca gttgaataaa cattcacaga gacttttatg acacgcgttc aatttaaaca
     5101 ccaccatcat caccatcatc ctgactagtc tttcaggcga tgtgtgctgg aagacattca
     5161 gatcttccag tggtgcatga acgcatgaga aagcccccgg aagatcacct tccgggggct
     5221 tttttattgc gcggttgata acggttcaga caggtttaaa gaggaataag aaaatgacag
     5281 acaacactcg tttacgcata gctatgcaga aatccggccg tttaagtgat gactcacgcg
     5341 aattgctggc gcgctgtggc attaaaatca atcttcacac ccagcgcctg atcgcgatgg
     5401 cagaaaacat gccgattgat attctgcgcg tgcgtgacga cgacattccc ggtctggtaa
     5461 tggacggcgt ggttgacctc gggattatcg gcgaaaacgt gctggaagaa gagctgctta
     5521 accgccgcgc ccagggtgaa gatccacgct actttaccct gcgtcgtctg gatttcggcg
     5581 gctgccgact ttcactggca acgccggttg atgaagcctg ggatggcccg ctctccttaa
     5641 acggtaaacg tatcgccacc tcttatcctc acctgctcaa gcgttatctc gaccagaaag
     5701 gtatctcttt taaatcctgc ttactgaacg gttctgttga agtcgccccg cgtgccggac
     5761 tggcggatgc gatttgcgat ctggtttcca ccggtgccac gctggaagct aacggcctgc
     5821 gcgaagtcga agttatctat cgctcgaaag cctgcctgat acaacgcgat ggcgaaatgg
     5881 aagaatccaa acagcaactg atcgacaaac tgctgacccg tattcagggt gttatccagg
     5941 cgcgtgaatc aaaatacatc atgatgcacg caccgaccga acgtctggat gaagtcatcg
     6001 ccctgctgcc aggtgccgaa cgcccaacta ttctaccgct ggcgggtgat caacagcgcg
     6061 tagcgatgca catggtcagt agcgaaaccc tgttctggga aacgatggaa aaactgaaag
     6121 cgctgggtgc cagttcaatc ctggtcctgc cgattgagaa gatgatggag tgatcgccat
     6181 gagctttaac acaatcattg actggaatag ctgtactgcg gagcaacaac gccagctgtt
     6241 aatgcgcccg gcgatctccg cttctgaaag cattacccgc actgttaacg atattctcga
     6301 taacgtgaaa gcacgcggcg atgaggccct gcgggaatac agcgcgaagt ttgataaaac
     6361 cacggttacc gcactgaagg tgtctgctga ggaaattgcc gccgctagcg aacgcctgag
     6421 cgacgagcta aaacaggcga tggcggtggc agtgaagaat attgaaacct tccacactgc
     6481 gcaaaaactg ccgccggtag atgtagaaac gcagccaggc gtgcgttgcc agcaggtcac
     6541 gcgcccggtc gcttcagttg ggttgtatat tcctggcggc tccgccccgc tcttctcaac
     6601 ggtattaatg ctggcgactc cggcgcgtat tgcgggctgt aaaaaagtgg tgctgtgctc
     6661 accgccgccg attgccgatg agatccttta tgcggcgcag ctgtgcggtg tgcaggacgt
     6721 gtttaacgtc ggcggcgcac aggccattgc cgcactggcg tttggtacgg aatctgtgcc
     6781 gaaagtggac aaaatcttcg ggccgggcaa cgcctttgtc accgaagcga aacgtcaggt
     6841 gagccagcgt ctggacggtg cggcgatcga tatgcccgca ggcccgtcgg aagtgttggt
     6901 cattgccgac agtggcgcaa cgccggattt cgtggcttct gatttgcttt ctcaggctga
     6961 acacggcccg gactcacagg tgattttact gacgcccgct gctgatatgg cgcgtcgcgt
     7021 tgccgaggct gtcgaacgcc agctggcaga actgccgcgt gctgaaaccg cccgtcaggc
     7081 actgaacgcc agccgcctga tcgtgactaa agatttagcg cagtgcgtag agatctccaa
     7141 ccagtacggc ccggagcacc tgatcatcca gacccgcaac gcccgcgatc tggtcgatgg
     7201 cattaccagt gccggttcgg tatttcttgg tgactggtca ctggaatcgg caggtgatta
     7261 cgcctccggc accaaccacg ttctgccgac ttacggttac accgccacct gttccagcct
     7321 cgggctggca gatttccaga agcgcatgac cgtgcaggaa ctgtcgaaag aaggtttctc
     7381 cgcgctggct tcgaccattg aaacattggc cgccgccgag cgcctgaccg cccataaaaa
     7441 tgccgttact ttacgtgtta acgcccttaa ggagcaagca tgagcatcgt gactattacc
     7501 gatttagcgc gtgaaaacgt gcgcaacctg acgccgtatc agtcggcgcg tcgtctgggc
     7561 ggtaacggcg atgtctggct gaacgccaac gaatatccca cagccgtgga atttcagctt
     7621 actcagcaaa cgctcaaccg ctacccggaa tgtcagccga aagcggtgat tgaaaattac
     7681 gcgcaatatg caggcgtaaa accggaacag gtgctggtca gccgtggcgc ggacgaaggt
     7741 attgaactac tgattcgcgc tttttgcgaa ccgggtaaag acgccatcct ctactgcccg
     7801 ccaacgtacg gcatgtacgg cgtcagcgcc gaaaccattg gcgtcgagtg ccgcacagtg
     7861 ccgacgctgg acaactggca actggattta cagggcattt ccgacaagct ggaaggcgta
     7921 aaagtggtct atgtttgcag ccccaacaac ccgaccgggc aactgatcaa tccgcaggat
     7981 tttcgcactc tgctggagtt aacccgcggt aaagcgattg tggttgccga tgaagcctat
     8041 atcgagtttt gcccgcaggc atcgctggct ggctggctgg cggaatatcc gcacctggct
     8101 attttgcgca cactgtcgaa agcttttgct ctggcgggcc ttcgttgcgg atttacgctg
     8161 gcaaacgaag aagtcatcaa cctgctgatg aaagtgattg ccccctaccc gctctcgacg
     8221 ccggttgccg acattgcggc ccaggcgtta agcccgcagg ggatcgtcgc catgcgtgag
     8281 cgggtggcgc aaattattgc agaacgcgaa tgcctgattg ccgcactgaa agagatcccc
     8341 tgcgtggagc aggttttcga ctctgaaacc aactacattc tggcgcgctt taaagcctcc
     8401 agtgcagtgt ttaaatcttt gtgggatcag ggcattatct tacgtgatca gaataaacaa
     8461 ccctctttaa gcggctgcct gcgaattacc gtcggaaccc gtgaagaaag ccagcgcgtc
     8521 attgacgcct tacgtgcgga gcaagtttaa tgagtcagaa gtatcttttt atcgatcgcg
     8581 atggaaccct gattagcgaa ccgccgagtg attttcaggt ggatcgtttt gacaaactcg
     8641 cctttgaacc gggcgtgatc ccggaactgc tgaagctgca aaaagcgggc tacaaactgg
     8701 tgatgatcac taatcaggat ggtcttggaa cacaaagttt cccgcaggcg gattttgatg
     8761 gcccgcacaa cctgatgatg cagatcttca cctcgcaagg cgtgcagttt gatgaagtgc
     8821 tgatttgccc gcacctgccc gccgatgaat gcgactgccg taagccgaaa gtaaaactgg
     8881 tggagcgtta tctcgctgag caagcgatag atcgcgccaa cagttatgtg attggcgatc
     8941 gcgcgaccga tattcaacta gcagaaaaca tgggcattac tggtttacgc tacgaccgcg
     9001 aaaccctgaa ctggccgatg attggcgagc aacttaccaa acgagaccgt tacgcccatg
     9061 tagtgcgcaa caccaaagag acgcagattg acgttcaggt gtggctggat cgcgaaggtg
     9121 gcagcaagat taacaccggc gttggcttct ttgatcatat gctggatcag atcgccaccc
     9181 acggcggttt ccgcatggaa atcaacgtca aaggcgacct ctatatcgac gatcaccaca
     9241 ccgtcgaaga taccggcctg gcgctgggtg aagcgttaaa aattgccctc ggcgataaac
     9301 gcggtatttg tcgctttggt tttgtgctgc cgatggacga atgccttgcc cgctgcgcac
     9361 tggatatctc tggtcgcccg cacctggaat ataaagctga atttacctac cagcgcgtgg
     9421 gcgatctcag caccgagatg atcgagcact tcttccgttc gctctcttac accatgggcg
     9481 tgaccctgca cctgaaaacc aaaggtaaaa acgatcacca ccgtgtagag agcctgttca
     9541 aagcttttgg tcgcaccctg cgccaggcca tccgcgtgga aggcgatacc ctgccctcgt
     9601 cgaaaggagt gctgtaatga acgtggtgat ccttgatact ggctgcgcca acctgaactc
     9661 ggtgaagtct gccattgcgc gccacggtta tgaacccaaa gtcagccgtg acccggacgt
     9721 cgtgttgctg gccgataaac tatttttacc cggcgttggc accgcacaag cagcgatgga
     9781 tcaggtgcgt gagcgcgagc tgtttgatct catcaaagcc tgtacccaac cggtgctagg
     9841 catctgctta gggatgcaac tgctggggcg gcgcagcgaa gagagcaacg gcgtcgattt
     9901 gctgggcatc atcgacgaag acgtgccgaa aatgaccgac tttggtctac cgctgcccca
     9961 tatgggctgg aaccgcgttt acccgcaggc aggcaaccgc ctgtttcagg ggattgaaga
    10021 cggcgcgtac ttttactttg ttcacagcta cgcaatgcca gtcaatccgt ggaccatcgc
    10081 ccagtgtaat tacggcgaac cgttcaccgc ggcggtacaa aaagataact tctacggcgt
    10141 gcagttccac ccggagcgtt ctggtgccgc tggcgctaag ttgctgaaaa acttcctgga
    10201 gatgtgatga ttattccggc attagattta atcgacggca ccgtggtgcg tctccatcag
    10261 ggcgattacg gcaaacagcg cgattacggt aacgacccgc tgccgcgctt acaggattac
    10321 gccacgcagg gtgccgaagt gttgcatctg gtggatctga ccggggcaaa agatccagca
    10381 aaacgtcaaa tcccgttgat taaaaccctg gtcgcgggcg ttaacgttcc ggtgcaggtt
    10441 ggcggcggcg tgcgtagcga agaagacgtg gcggcgttac tggaagcggg cgttgcgcgc
    10501 gtggtggtcg gctccaccgc ggtgaaatca ccagaaatgg tgaaaggctg gtttgaacgt
    10561 ttcggtgccg atgccttagt gctggcgctg gatgtccgta ttgacgagca aggcaacaag
    10621 caggtggcag tcagcggctg gcaagagaac tcgggcgttt cactggaaca actggtggaa
    10681 acctatctgc ccgtcggcct gaaacatgtg ctgtgtaccg atatctcgcg cgacggcacg
    10741 ctggcaggtt ctaacgtctc tttatatgaa gaagtgtgcg ccagatatcc gcaggtggca
    10801 tttcagtcat ccggcggcat tggcgacatt aacgatgttg ctgccctgcg tggcactggc
    10861 gtgcgcggcg taatagttgg tcgggcatta ttggaaggta aattcaccgt gaaggaggcc
    10921 atcgcatgct ggcaaaacgc ataattccgt gtctcgacgt tcgtgatggt caggtggtga
    10981 aaggcgtaca gtttcgcaac catgaaatca ttggcgatat cgtgccgctg gcaaaacgct
    11041 acgccgaaga aggtgcagac gaactggtgt tctacgatat caccgcttcc agcgatggcc
    11101 gtgtggtaga taaaagctgg gtatctcgcg tggcggaagt gatcgacatt ccgttctgcg
    11161 tggcgggtgg gattaagtct ctggaagatg ccgcgaaaat tctttccttt ggcgcggata
    11221 aaatttccat caactcgcct gcgctggcgg atccgacgtt aattactcgc ctggcggatc
    11281 gttttggcgt gcagtgtatt gtggtgggta ttgatacctg gtacgacgct gaaaccggta
    11341 aatatcatgt gaatcaatat accggcgatg aaagccgcac ccgcgtcact cagtgggaaa
    11401 cgctcgactg ggtacaggaa gtgcaaaaac gcggtgccgg agaagtcgtc ctcaacatga
    11461 tgaatcagga cggcgtgcgt aacggttacg acctcgaaca actgaaaaaa gtgcgtgaag
    11521 tttgccacgt cccgctaatt gcctccggtg gcgcgggcac catggaacac ttcctcgaag
    11581 ccttccgtga tgccgacgtt gacggcgcgc tggcagcttc cgtattccac aaacaaataa
    11641 tcaatattgg tgaattaaaa gcgtacctgg caacacaggg cgtggagatc aggatatgtt
    11701 aacagaacaa caacgtcgcg aactggactg ggaaaaaacc gacggactta tgccggtgat
    11761 tgtgcaacac gcggtatccg gcgaagtgtt aatgctgggc tatatgaacc cggaagcctt
    11821 agacaaaacc atagaaagcg gcaaagtcgc cttcttctcg cgcactaaac agcgactgtg
    11881 gaccaaaggc gaaacgtcgg gcaatttcct caatgtggtg agtattgcac cggactgcga
    11941 caacgacacg ttactgttac tggtgaatcc tatcggacca acctgccata aaggcaccag
    12001 cagctgcttc ggcgacaccg ctcaccagtg gctgttcctg tatcaactgg aacaactgct
    12061 cgccgaacgc aaatctgccg acccggaaac ctcctacacc gccaaactgt atgccagcgg
    12121 caccaaacgc attgcgcaga aagtgggcga agaaggcgtg gaaaccgcac tggcagcgac
    12181 agtacatgac cgctttgagc tcaccaacga ggcgtctgat ttgatgtatc acctgctggt
    12241 gctgttgcag gatcaggatc tggacttaac gacggtgatt gagaacctgc gtaaacggca
    12301 tcagtgagtt gcggggtaag cggatgcgat attgttgtag catccggaaa aaaaaacggg
    12361 caaggtgtca ccaccctgcc ccttttcttt aaaaccgaaa agattacttc gcgttgtaat
    12421 tacgcagagc gttacgcccc aagacaatcc ccgcgccaac catgccgccc agcagcaccg
    12481 ccagaatcaa ggtaattgcc tttttcgggc tatcgcgacg aataggtaac gtcggtttca
    12541 ttacatagcg gtaagcatga atatcaagtt tatcaacgtc aagattgtcg atatccagca
    12601 ggttttgacg agtctgatag tagtttggtg agaacaccaa cggacgagtc gcttcatgct
    12661 taatcatcga ctccagcgct tcgctcccca aaaggaacaa cgtatcttgt gtcacatctt
    12721 cagtctgctg aacctgtggc tttgtcacct gcgcctgatt cgcatactgc aacgcttcct
    12781 gaatctgacg gatacgcaga tctttctgct cctgcgcaac tacttcctga gttttcagag
    12841 aatcctgcaa gtttttcata cgcagcgcga tgttgtcttt caggtctttt cccagttctt
    12901 catttacctg gtcgtcaact tgctggatat acttcgccag ctgcttctga gcaccttcag
    12961 gtgtttcacc aacataagac accgctaaag gtaatgactg atttttgacg gtaggctcaa
    13021 tggtcagctt ttctgcttct tcctggttat ccagcgtttc cgctaatgct gagaatgcag
    13081 tgctgtaacg tccgataagt gaagcctgaa tgtcggagac tttcggtaca gccgatccgt
    13141 agatcacatt catcgcgttg gtataaccag cgatttgccc cacatcaggt tgagtaacga
    13201 tagctgtgga agtccacttt tctttggcaa cggccagata ccctatagcc agggcaatag
    13261 caacaatgac agagatgata attgtcatct tgccacgcca caactgcacc agtaaatcaa
    13321 tcaaatcaat ctgttccgga tcatggtttt gcccagaaac attattattt tctactctca
    13381 tcattaccct aacggacgaa ataattttaa gtcgccatag tttagcgata atcgccatga
    13441 atgctatagg ataaatgata aaaataatga attattacaa agggaacata agagaatcag
    13501 ggcgaaaatc gccatgataa caggatgtta gtcactgcca aagagatcgc gggtgtagac
    13561 tttgtctgcc acatccttaa gctcttctgc catacggttg gagataatga cgtcggcttg
    13621 tatagtcagc ttagaacagc tttgattgta aaatgagcac gttaccagaa aaaacagcca
    13681 agtttagaac tgataccgat tatctttttt tcttgtctaa cggtataatt taactttcag
    13741 ttatgccaga tgaagattgg ctatattcta gcctgagcga ggattataaa tgaaatttct
    13801 ggttacggga gctgctggct ttatcggttt ctatctaagt aaacggcttc ttgcagctgg
    13861 tcatcaggtt gtaggcattg acaacttaaa tgattattac gatgtcaacc tcaaacaagc
    13921 acgacttgat ttactcaagc acgacaactt cagtttttat aaaattgacc tggccgatcg
    13981 tgagaaaatg gcggcactgt ttgcagacga gcggttcgaa cgcgtaataa acctcgctgc
    14041 gcaagccggt gtacgttact ctcttgaaaa tcccaatgca tatgcagatg caaacctgat
    14101 tggattcctg aacatactag aaggatgtcg ccataataat gttcagcatc tactttacgc
    14161 ttcctccagt tctgtttatg gcatgaaccg caagatgcct ttctctacag atgactctgt
    14221 agatcatcct gtttcgcttt atgcagcaac taaaaaagcg aatgaactca tggcccatac
    14281 atattctcat ttgtatggct taccgaccac agggctgcgt ttctttacgg tttatggtcc
    14341 atggggacgt ccggatatgg cattatttaa attcactaaa gccatgctgg aaggtaaaag
    14401 cattgatgtt tacaacttcg gcaaaatgaa gcgtgacttt acttacattg atgatattgc
    14461 cgaagctatt attcgcttac aggatgttat tccagaaaaa aacccacagt gggctgtaga
    14521 aacaggctcg cctgcaacaa gttcagcacc atatcgtgtc tataacattg gtaatagttc
    14581 gcctgtggag ttgatggact atatcaatgc gttagaagag gctctgggta ttgaagccaa
    14641 caaaaatatg atgcctctcc aacccggtga tgtactggaa accagtgctg atacaaaagc
    14701 actgtatgac gtaataggat tcaaacctga aacgtcagtt aaagaagggg taaagaactt
    14761 tgtagaatgg tatcgtaact tctataaagt ttgattttac aaaaccataa gaaaaggccc
    14821 taatttatta gggccttttc ttagaatgaa acaaaataat taatcattgc caaacaagtc
    14881 gcgcgtataa actttatctg ctacatcagc cagatcggca gacatacggt tagaaataat
    14941 aacatcagct tcttgtttga acgcatccag atcacgtacc acgcgcgacc ggaaaaaatc
    15001 gtcctctttc atagctggct cataaacgat tacaggcaca cctttcgcct tgattcgctt
    15061 cataataccc tgaatcgagg aagcacgaaa attgtctgaa ccattcttca taatcaaacg
    15121 atagacgcca acaactttcg gtttacgtgc aaggatagaa tcggcaataa aatctttgcg
    15181 cgtgcggttg gcgtcaacaa ttgccgagat caggttattc ggcacagact ggtaatttgc
    15241 cagtaactgc ttagtatctt tcggcagaca ataaccacca taaccgaatg acgggttgtt
    15301 gtagtgatta ccgatacgcg ggtcaaggca tacgccctca ataatctggc gtgaattaag
    15361 tcccaggctt tcagcataac tatcaagttc attgaaatac gctacacgca tcgccagata
    15421 agtgttcgca aaaagtttaa tcgcctcagc ctcggttgag tcagtaaaca atgttggtat
    15481 gtcttgctta atggcgcctt cctgtaataa cgcagcaaaa cgtttagcgc gttcagactg
    15541 ctcgccaatc acaatgcgtg atgggtgtaa gttatcataa agtgctttac cttcacgcaa
    15601 aaactcaggc gaaaagatca cattttcaat accaaaacgt tctttaatgg actctgtaaa
    15661 accaacaggg atagttgatt ttataatcat taccgcgttg ggattaattt ctgtcacatc
    15721 acgaatgacc gcttccacgc ttgaggtatt aaaataattt gttttcggat cataatcggt
    15781 aggtgtggca ataataacgt aatcggcatt tttatacgcg tcatacttat ctgtcgtagc
    15841 gcggaaattg agatctttag tcgccagata ctcttcaatc tccttatcaa caagcggtga
    15901 ctgcctcttg ttaagcatgt ccactttggc ctgaacgata tccagtgcaa ccacttcgtg
    15961 gttttgcgca atcagaatac catttgaaag accaacataa cctgttcctg aaattgttat
    16021 tttcattagc tctgacttct tccggttaaa catttagagt ggtcattaat ccaccaccac
    16081 agcttcatct actgcgggat ttttaacgct gatgtagatg aactgtcaag gcagcgatcc
    16141 tgctgtgcgg cgctgtatta tatcgcgttt ttaactataa attataaaaa aaggccctaa
    16201 cctgccgctt tgtataataa aaaagcccgg agggtttctc cgggccttgc tttgattaat
    16261 tgatttaaat cagattaatc cagccattcg gtatggaaca caccttcttt atcaatgcgc
    16321 ttataagtat gcgcaccgaa atagtcacgc tgtgcctgga tcaggttcgc aggcagaaca
    16381 gcggcgcggt agctgtcgta ataggcaacc gcagcggcga aggtcggcac cgggataccg
    16441 ttctgtactg cgtaagcgac gacatcgcgc agcgcctgct ggtagtcatc ggcaatttgc
    16501 ttgaagtaag gagccagcaa caggttagcg atctgcggat tttcggcata agcatcggtg
    16561 attttctgca ggaactgcgc acggatgatg cagccagcac ggaaaatctt cgcgatttca
    16621 ccgtagttca gatcccagtt gtactcttca gacgcagcgc gtagctgaga gaagccctga
    16681 gcgtaagaaa cgattttgcc cagatacagc gcacggcgaa ctttttcgat gaactcagca
    16741 ttgtcgccag ctggctgcgc ttgcgggcca gagagaactt tagatgcggc aacacgctgc
    16801 tctttcagag aagagatata acgtgcaaac acagactcgg taatcagcga cagcggttcg
    16861 ccgagatcca gcgcgctctg gctggtccat ttgcccgtac ctttgtttgc tgcttcatcc
    16921 agaatcacat caaccaggta gttaccctct tcatcttttt tggtgaagat atctttggtg
    16981 atgtcgatca ggtagctgct cagttcaccg ttattccact cggtaaaggt ctgcgccagt
    17041 tcttcgttgg tgaggttcaa gccaccttta agcagagaat aggcttcagc aatcagctgc
    17101 atatcaccgt attcaatacc gttgtgaacc atcttcacat aatgacctgc accatcggca
    17161 ccaatatagg taacgcacgg ttcgccgtct tcagccacag cggcgatttt ggtcaggatc
    17221 ggcgcaatca gttcataagc ttctttctgc ccaccaggca taatggaagg acctttcagc
    17281 gcaccttctt caccaccgga aacaccggta ccgataaagt taaagccttc tgcagaaagc
    17341 tcacggttac gacgaatggt gtcatggaag aaggtgttac caccatcaat gatgatgtca
    17401 cctttatcga ggtatggctt gagggaatca atagcagcat ccgtgccagc acctgctttc
    17461 accattaaca ggatgcgacg aggcgtttcc agagattcaa caaattcttt caccgtatag
    17521 taaggaacca gtttcttgcc tggattttcg gtaatcactt cttcggtctt ttcacgggaa
    17581 cggttgaaaa tagagacggt ataaccacgg ctttcgatat tgagcgcaag gttgcgcccc
    17641 atcactgcca taccgacgac gccgatctgt tgctttgaca ttgtttactc ctgtcaggat
    17701 accgctgggt ggtatgcggg ttatgcttaa ttatagaata tgcctaataa aaataaatcc
    17761 ataacactta atcagaaaat tattattatc gattcctaac gattgaatac atcagctcct
    17821 ttaatttaga tggcattata cgaaaaaatg ttctcaacat agcattactt attaattcat
    17881 tttttcgaat aaaaccaatt ttatattgat aatacaatac tttatactcg tacaataaat
    17941 atgacaatcc acgtcgagcc ataagattac gaccagttcg catttttaat aaaatatctg
    18001 gaagatttgc aaatcttgca ttatgtacaa ttaataggct ccacaatgca aaatcttgag
    18061 attttctgaa tggaggataa ccaccaacag ctaatactgt attctttcta aaaattacag
    18121 aaggatggct aactgcgctt cgtttcctcg cgaatttaac tatttctcta tgttcgagag
    18181 gcactttgcg tgttgaaata aactcctcag taacagtttc aatttcatca ataaaactgc
    18241 cacatacatc tatttctgaa ttattaatca taaaagaaat ttgtttctca aaccgatgag
    18301 gcaaagaaat atcatcagca tccattcttg ccactaactc attcctacaa gcctttaatc
    18361 cttcatttaa ggcattagcc aatccaacat ttctaggtaa aggtacaaat gttactattt
    18421 tattgccaac atcatcaatg aatgaattta taatatcgat gtgtgtttga tggagttctc
    18481 catctgcaac aattactatt tgatctggct taagtgtttg atcgtgaaaa atagagcgta
    18541 gagccacctc aaaaaattgc ggtagatcat ttttataaat gctaattaaa actgagaatt
    18601 tttctaatct atgattcatt tcattttacc acttcgaccc attaaaccgt cattaatgcc
    18661 ttttaaaaaa aaatataacc ttttattacc atttggaagg aaaataggat ataaaaaaac
    18721 ctttccaatt aatttaacca gactagaaat tttccagtag atgggtacat aatttttatt
    18781 taataaaaga aagatatttc gagtagcata ataatgacga aatgggcttg gcaaaccgac
    18841 agaaagaata tttaagatct taaatcgccc atctccaagt ctatgtgcaa gtaacgcatt
    18901 tttattccta attactttaa acccagcagc tcttaatctc caacaatatt catggtctac
    18961 cgcatcgata aaaagctcat ctttcattcc tccaacaatc aaccaactat tttttggtat
    19021 tagactgcca gaacttaatg tactatctac ctcataataa acttctgtaa gtggtttccc
    19081 tttttttacc cttgctttat ttaattcacc agttacttta tcaaaatctt gtgaaccaac
    19141 taaaccaaca ttgacatttt gtttaagcaa ttttttgtaa caagtaagta actgctctac
    19201 catcttagga tcaggaatac tatcctgatc catttgcaat ataaaatcag cgccattttc
    19261 aaaagcccat ttcattccta tactttgggc ttctgctatg cctaaattat cattgaaatt
    19321 gaatattttt acatcgcctg aagaattttc agcatattta taaccatttg tagagttatt
    19381 gcaaacgaca actttagtaa cttgtctcaa caataattca accgcatttt ttaaatcatt
    19441 atgttctggg ttgtaagcaa ccaaaacggc atatacagtg tccatcttca ccttaaaacc
    19501 ttcatttagc tttcatcttt tttagaacat tacttaatgt cactaataca attattacag
    19561 caacatggtt agagtctaaa atataaggat tagtaattgc ataagaaaca tatagaaaat
    19621 atagcacaca caactcactg tattttatga ttttaatcgt gagaaggaga ttaattaata
    19681 aaaacaaagt aaataaaata acgccaagtt gatttaaaaa ataaactgac tgcaattcat
    19741 aatatatata tgcactataa tcacggatag gagtttgaat tttgatgaca ttacccaaac
    19801 cagaacctat aacaaaattt gatacagact ctgtaagatc attaattaat acagtaaact
    19861 gatcccatct aactcctaaa gaagaatcag ctccatttga tttcatgatt atcaactcaa
    19921 ttgaatatgt aataaaaaaa gggagaatca cagtaagaaa aaccccaaaa ataattttcc
    19981 ttaatttagc gtatcgtgag ttagatttag aacatagtat aatatacata aaaaacaagc
    20041 atatcgaaac aaaatatgca aaattaccag ccactatagt acctatagcc agaataacgg
    20101 ttattgtatt tttgaatcga taatagaaat aatcttttat gactatatgc aacataaagg
    20161 caaatggaat gagagcattt cctttaattt gaactctata gaaaccactt ccatatgtat
    20221 aaacatcacc ataatcattc tccaaaaaat aatgtcttag tgctgaataa tcaccaatac
    20281 catatgtttt tgtcatataa atactaatga tggatataat aaccgcctgt aataccatta
    20341 aatataaaaa tattttaaca atcgagatgg ttccataaga gcagaaataa gcacataata
    20401 taaataatat gataatataa aacctaatta ttatcgctat atcgttaccc ttgatatagg
    20461 aataaataaa atttataaaa agagctaata gaaatattaa aataacagga tagtgatata
    20521 ttccgtttgc aattttcttt gtaaatgaca tgatacaaag acataaaaac ccctccataa
    20581 tccaactata ttgaataaat ggaaagctac gtgtaaggaa aaatataaac ccaaaaaaca
    20641 aaagaacact taaacttttg tcttttgagt tataaaaatc agaagtcatg tttgcactct
    20701 aattagatgg gcttgaggaa gtaatcccta aaatcaattc gctattaata tttcgtatca
    20761 attaataata atatcaaaaa atctaacgat gttcttacag accatgctat tgcggctcca
    20821 acaattcccc aatgataaat aaaaatatat aatatgcata aatatgggat aacttcgagc
    20881 aaatgaataa tagctgtaat ttttgatctt ccactagcct gaactgaaac aaatgggatt
    20941 tgtgcaatgc aattaaaaaa gaaacctatt gcaagaattt ttaatactat acctggcgtc
    21001 ccatgatatg taggtcccat ccaagcggac attataaaat ctgataaaat aattatcaac
    21061 attacaattg gaagtatacc aataaccatt ataaaatatg ataatatttt agtttgcttt
    21121 accgattgca attctgaact taatcttgga aaaatagctc tggacaacgc acttggtaat
    21181 atcgttaagc gttgtatacc ttcagacgga gcagtataaa aagaaacttt atcagccccc
    21241 acaatgtgtg aaagaataaa acgatccata tatgtcataa tagggctaat aatattgcta
    21301 actgttatcc agcttccaaa gccgattaat cttttaactg ttacaatttt tacagacagc
    21361 ccagatgata ttattagttt tcgactaaat ataaaggtca ctataagtga taagactctt
    21421 gccataacta aaccatatat agcacttagt aatcctccat gaaaaaaaca gaaaatcact
    21481 ggtaatccag ccacaaaaga gttgttaatt gattttatta aatttacttt tctgaacttt
    21541 tccatcccct caaaaatccc caaccagact tggtttaaca agtataaggg tatggtagct
    21601 gaaataatat atattgcttt gacagattct acaacatgat tcgcgttaat gtttaataat
    21661 ttaacaatta cattgctact caaaaatagt acactaccgc caatcaagcc caatatagtt
    21721 agaattaccg ttgaagttga aatgatcgct cttaattctt tatgaacatt tttatatatt
    21781 gatacttctc ttataacagc tctggtcaat ccagcatcaa aaatacttgc atatccaact
    21841 aaggcaatag ctaacgtaaa aaggccaaat tgctcggtcc ctagaattct agacagtata
    21901 cctaacgcag gaattgctat taatgatggt ataatatacc cacttatatt ccataaagta
    21961 ttctttacaa tactcacaaa aataattcct tcatgttatg caattcttta gcccttgcat
    22021 ctttaatcga taaaatataa ttattatgtt ctatcgtcgg ccattttatg ctcagaatag
    22081 gatcattcca tacaatccct ctatcactat caggatgata atagttcgtc gttttatata
    22141 aaaattccgc agtctcgctc agcaccaaaa aaccatgtgc aaatccctca gggatccaca
    22201 attgccgctt attctcagca gataaattca ccccaaccca tttaccaaag gtaggcgacg
    22261 atttacgaat atcaacagct acatcaaaaa cctcaccaac aacgcaacgt accagtttcc
    22321 cttgcgcata aggttctaac tgataatgca gcccgcgtaa aacaccttta ctagacttcg
    22381 aatggttatc ctgaacaaat tcaaccttac gtcctacagc tccttcgaaa actttctgat
    22441 taaagctttc cataaagaaa ccacgctcat caccaaaaac tttcggctcg aaaattaaca
    22501 catcaggaat ttctgtttta attacgttca ttttattaat aacctttaat cattttcagc
    22561 agatactgtc cataagcatt ttttttcagc ggctccgcta atgctttcac ctgttcagca
    22621 tcaataaacc ctttacggta agcaatttct tctgggcagg aaacctttag tccctggcgc
    22681 tcttcaatgg tggcaatgaa gttgcttgct tcaataagac tctgatgtgt ccccgtatcc
    22741 agccatgcat aaccacgccc catcatggca acggataaac gcccctgttc catataaata
    22801 cggttaatat cggtaatttc cagttcacca cgggcagaag gcttaaggtt tttcgccatt
    22861 tcgacaacgt cgttatcata gaaataaagc ccggttaccg cataattact ttttggttgt
    22921 agcggttttt cttccaggct tattgccgta ccgtttttat caaactcaac gacgccgtag
    22981 cgttcaggat cattaacgtg ataggcaaat accgttgcac cactttcttt gttaacagcg
    23041 acatccatta acttcggcag atcatgaccg tagaagatat tatcaccaag aaccaaagca
    23101 caatcatcac caccgataaa ctcttcaccg ataataaacg cctgcgcaag cccatctgga
    23161 gtcggttgca ctttgtactg aagatttagc ccccactggc taccgtcacc tagcagttgt
    23221 tgaaaacgag gagtatcctg tggcgtacta ataatcagaa tatcgcgaat acccgccaac
    23281 atcagtgtag agagcgggta atagatcatc ggcttatcat aaataggtaa tagctgttta
    23341 ctgacagcca tagtcacagg ataaagacgt gtaccagaac cacccgctaa aataatacct
    23401 ttacgcgttt tcatttcatc attcctttta attcatcttg ctccaccatc acgaacaaga
    23461 tgcaaaaact attaaattgc tgtagtcgta attaattcgt tgagcattcg tttcacacca
    23521 acctgccagt caggcaagac aagcgcaaag ttctgctgaa atttttctgt attaaggcga
    23581 gagttatgtg gacgacgagc tggtgtagga taggctgttg ttggtactgc gttgagcttg
    23641 ttgagtgcaa ggggaatacc tgctttgcgc gcctcttcaa aaaccagcgc agcataatcg
    23701 tgccaggttg tggtaccact ggctaccaga tggtacaaac ctgcgacttc cggtttattc
    23761 agtgccacac gaatagcatg tgccgtacaa tcagccagca gctcagcacc tgttggcgca
    23821 ccaaattgat catttatcac agccagttct tcgcgctctt ttgccagacg caacatcgtt
    23881 ttggcgaagt tatttccttt agctgcgtat acccagctgg tacggaaaat aagatgcttc
    23941 gcgcaatgtt cctgtaacgc tttttctccg gctaacttgg tttcaccgta aacatttagc
    24001 ggtgcggttg catccgtctc cagccatggc gtgtcgccat ttccagggaa tacgtagtca
    24061 gttgagtaat gaattaccca agccccaact tcattagcct cttttgcaat tgattcaaca
    24121 ctagtcgcat tgagtaattg tgcaaattcg ggttctgact cagccttatc tactgcggtg
    24181 tgagccgcag cattaacaat aacatcaggt cgaattcttt tgactgtttc agctacacct
    24241 tcaggattac taaaatcacc acaataatca gtggagtgaa catcaagagc aatcaaatta
    24301 cccaaaggtg ccagagcacg ctgtagttcc caacctacct gccctgtttt gccgaaaagg
    24361 aggatattca ttactggcgg ccctcatagt tctgttcaat ccacgattga taagcaccac
    24421 ttttcacatt atcaacccat tttgtattgg acaggtacca ttccaatgtc ttccgaatcc
    24481 cgctctcaaa cgtttcctgc ggtttccagc ccaattcgcg gctaatcttc tctgcatcaa
    24541 tcgcataacg gcgatcgtgt cccgggcgat cggcaacata agtaatttgc tcgcggtaag
    24601 atttctcttt cggtacaatc tcatccagca aatcacaaat agtgagcact acatcgatgt
    24661 ttttcttttc gttgtgtcca ccaatgttat aagtttcacc cgctttacct tcggttacga
    24721 cggtatataa cgcacgcgca tgatcttcaa catacagcca gtcacgaatt tgatcccctt
    24781 tgccataaat aggtaatgcc ttaccttcca gagcattcag aataaccaat ggaatcaatt
    24841 tttccgggaa atgataagga ccataattat tagagcaatt agtcacaatg gttggtaaac
    24901 cataggtacg tttccacgcg cggactaaat gatcgctgga tgcttttgaa gcggaataag
    24961 ggctgcttgg cgcgtaagct gttgtctctg taaataaggg taattcttct gtattattta
    25021 cctcgtcagg atgaggcaaa tcaccataga cttcgtcagt agaaatatga tgaaaacgga
    25081 atctagtttt cttgtcgcta tcaagagcag accaataatt gcgagcggct tccaaaagga
    25141 catatgtacc aacaatattg gtttcaataa atgccgcagg acctgtaatt gaacggtcaa
    25201 catggctttc agcagccagg tgcatcactg catctggctg atgctgagca aaaatccgtg
    25261 ccattgcagc tgcatcgcaa atatccgcat gttcaaaaac atagcgttca gaatcagaaa
    25321 catcagcaag tgattccagg tttccggcgt acgttaattt atcgacatta acaacactat
    25381 cctgcgtatt atttataatg tgacgaacta cagcagaacc aataaatcct gcgccaccag
    25441 taacaagtat tttcacctaa tttattccat attgcttcag agcatgctgt gaaataagcg
    25501 gctctcagtt tgattaatag aagtattaat gcacgctacc gcccctggct ttacagctac
    25561 cagagcactg catgcatgcc tacgatgtga cgagcgttac ccactcgcgc taaacccgaa
    25621 aaattcaaaa gctaattgtc ttaccaatcc gctctggaaa caaggaaaat cctggaaaac
    25681 tttgactaaa atcctattgc taactcgttg ttattctgat tgtttatata aaacaacggc
    25741 aggaatattc gcaacaaatt actttcacca cgaatcttca ctgccgttat aattttctta
    25801 tcaaccgtta catccggtca gattttcatt attcgcttaa cagcttctca atacctttac
    25861 ggaacttcgc cccttctttc aggttgcgca gcccatactt cacaaacgcc tgcatatagc
    25921 ccattttttt accgcagtcg tagctgtcgc cggtcatcag cattgcatca acggactgtt
    25981 ttttcgccag ctcggcaatg gcatcagtca gctgaatacg tccccatgca ccaggctgag
    26041 tacgttcaag ttccggccaa atatcggcag aaagcacata gcgaccaacg gccatgatgt
    26101 ctgagtccag cgtctgcggc tgatccggtt tttcgataaa ttcaacaatg cggctgactt
    26161 taccttcgcg atccagcggt tctttggtct ggatgacgga gtattcagag aggtcacccg
    26221 gcatacgttt tgccagcacc tggctacggc ccgtttcatt gaagcgcgca atcatggcag
    26281 caaggttgta gcgtagcggg tcggcgctgg cgtcgtcgat cacaacgtct ggcagcacca
    26341 cgacaaatgg attgtcacca atggcgggtc gtgcacacaa aatggagtga cctaaaccta
    26401 aaggttcgcc ctgacgcacg ttcataatag tcacgcccgg cgggcagata gattgcactt
    26461 ccgccagtag ttgacgcttc acgcgctgct caaggagaga ttctaattca taagaggtgt
    26521 cgaagtggtt ttcgaccgcg ttcttggacg catgagttac caggaggatt tctttgatcc
    26581 ctgcagccac aatctcgtca acaatgtact gaatcattgg cttgtcgacg atcggtagca
    26641 tctctttggg tatcgcctta gtggcaggca acatatgcat cccaagaccc gctaccggta
    26701 taactgcttt taaattcgtc attattttcc tacctctaag gggctgatag tgcgtaaatt
    26761 attgtcatag gttagccaaa cggtatggct atataccaag cataactttg attaaacctt
    26821 acgataacac tacacaccat cagcatctgg gttactcgga ttactcggaa atccacatac
    26881 tgataattta atcagtacct ctttccgaat aatcgtagtc caacctggtc cttttttctc
    26941 tgactcgtct gcattactca gaaacaaacg ttatgtcgtc ttttttggca tggacgaatt
    27001 catactgcag agttcgatcc agaccttgcg acagcgtata cggtgcaaca aaacctgaag
    27061 aatgcacttt cgttgcgtca aactgtgttg ttgcgcagaa ttttttcacg cgcacagagc
    27121 tgacagcgta ttttttgccc gtaattttgc tcaggatatc aaagcaatat ccacccagca
    27181 ttcctagtgg gtaaggcaag tgcatagaag ggatcttttt gttcaggctt tgttcaactt
    27241 cagcaaccaa ctggttcatg ttcaggtctg gcttatcaac atagttataa acctcataac
    27301 ctgcggcaac attcttcagt ttgtacttga taaactcaac aatgtttcca acataagcca
    27361 tggacttata gttagtccct gcgcccacca tcataaactt gccgccagcg atctgtttca
    27421 gcaagttata gacgttaccg cggttgcgtt caccgaagat aacggtagga cggatgatgg
    27481 ttaatgaacg ttctgttggt gctttgttat accattcaca cagcacttcc tctgcctgcc
    27541 acttactttt gccgtagtgg ttgaaagggt cgtgtggatg gttttcgtca gggttgtgtt
    27601 tgttcaaacc ataaacagca acggaactgg taaagatgat atttttaacg ccattttttt
    27661 ccatggccgc cagcacattg cgggtaccct gaacgttgac atcataatag agagaagtag
    27721 ggctgacgtc atcgcggtgt tccgctgcca gtagtacaac agtgtcaaaa ccggctaacg
    27781 cctggtcgag tgcctgttga tcacgaacat caccaatctg tgtgatttct ggataaaagt
    27841 ggctctgccg tttgtccagg ttcttgatat taaagtcagc aattgccgtt tcaagtagtc
    27901 gggttcctac gaatccggaa gctcctatga gcaaaacgtt attgttcata aatcacttta
    27961 gtctggttgt tacgtaagaa acacaagata aagatgagta ccttccctga gtagtcaatg
    28021 ctgcccagcc ccagctttaa cagttagtgt gaggattata atcttttaga acattatatc
    28081 cagtaagttt atgaatggtc gcaaatctac tctctccgtt ccggcaatct aaagttaatc
    28141 ttttccacat taacaatatg gtgattaatc ctgtcgatgt cgacggagct ttgccctctt
    28201 tcattcatcg catgaacatt tgcaagtgac agcagtgttt cttttttcgc cataaagaca
    28261 ccgcgtacgt ctttgcgcat gtcgaagttc atgctcaatg ctggtccaac tgaggattcc
    28321 tgcatcacct tgatattacg cataaaaaga tgttgcggtt tgttgtgtaa ctccagcgag
    28381 gcacgcttca tctcaatgtt agtcagtgcc acaaaggaga cagcattccc ggcggagatt
    28441 tggatgccgc gcaatttata aacaagatgg gtgttatcca gttgaatatt attcactctg
    28501 aaattttgcg gtatcgagag atatttgcct ttaattaccc catagccgat taacatcccg
    28561 gcgctattaa tcatttcaat attatcaatc acgaaattgt cacaaccgta aatagcaact
    28621 gtcgcgttat caatgcctgc tttcttactg aaatccggcg tgatattgcg ggctttgata
    28681 ttacggataa caaaatgttt gccattttca acatggatca actgccgaca atccgatccc
    28741 gtgatattcg ccacgacaaa gtttttcact gcctggtctt ccgggtagtt attatcgtag
    28801 gtactccccg caaggcctat gccaattccc cagttgattt tgccattagt acagttgatg
    28861 cgctcgatga catggtcgga gatcaaaata tcactgtcgt taattgccac gttccattca
    28921 atggcgtcgc cctgtaagtc gctgaactta caattggtga tgttggcacc gataatctgg
    28981 ttatgaaatc cctggcgtaa gatggcgtaa ttagcgtggc tgacagtgag gttatcgatg
    29041 gtcaggttgc tcatgacccg tttgtttttg ccgccgatat aaatctgcgt taccgggcca
    29101 aagccgctca tcgccagccc tttgatggtg cagtcagaac cacgcacatc caaggtgatg
    29161 ttatgcatac tgccgccctc ctcccctgtc acctggctgc cgtcctgtaa gacaaatcgc
    29221 cctctgccgt tgccgcgcaa gcttccaaga atgtgtaacg ttttaccggg agggataaag
    29281 atgccggtgt tgatattgtc acaaaccaat ccggcaggca cgacgaccgt atgcccttcg
    29341 ctgaaggctt gtttaaatga ggcgatccag tcgtgtgggt tgtagtcgtt aatgttaacg
    29401 ctttgtcggg cgggaagtgc gcgagcgaaa ggggtatgga ggaaggcaag cgccgagctt
    29461 gccgtcagga aggtgcgtcg ggagagtgtt ttaaatggca tgcgttctcc tctataaagc
    29521 ttgcagcaag ctggcgagtt ctcgattgat cacctgctgg ttaaaatcgt gttcgacttt
    29581 ttcgcgcgca cgtttgacaa ccggagccag ttcgtcggtg cccagttggc taaacgccgc
    29641 cagtcgttgc gccagtgcgc gagcatcgtt ctcaggcacc agccagccgg atttgtcagc
    29701 ctccaccagt tccggtattc cgctatgcag agtagaaacc accggaatac cgaccgccat
    29761 cgcttccatt agcgccaccg gaatgccttc catatcacca tccgcgcccg ttaccgatgg
    29821 caacagaaag acatccgcgt cgtcgagcat cgctttcact tcgtggctcg gtttaaagcc
    29881 cggcatctct accacatctt ccagttgata ttgttcgatg agggtacgca ggcgtcgttc
    29941 ccacgggcca atgccgagga tgcgatagcg aaatgccacg ccctgctctt tcaactgacg
    30001 gcaggcttca atcgccacat gcaggccttt tttctcggtt aagcgtgcga cggaaatgat
    30061 ttccagcggc gttgcgggcg ctttcaccgg acgcgggcta aagcgcgtca tgtccacgcc
    30121 catacgcgat acggcgattt tttccctcgg gcagcccatt ttttgcagcc ttccggccca
    30181 caaatcgctt atcggtaaca tcaggtcgcc acggcgaaac agttgttgat attcgggagt
    30241 gtaatggttg agcacttccc gactggaaat atcaatgccg tggaaaatgg tggcaatttt
    30301 gccgcgaatg acacccagtt cccgtagttt tgctgcggtt acccccgccg ggccaaaatg
    30361 agcgatgaac acatcggcat gaagcggtgt tgcgacctgg ccgcaaatgg cagacaaaat
    30421 caggttccgc gactcggcac catagcgttt gaggttgagc gcctgccagg tatttttacg
    30481 ataaatgccg cgtaacgtct ggctggcgcg gtggcgcagt ttcgctattt tgcccgtagg
    30541 ttcgtcctgt aaccagtggg ttctggcggc aaggttgtat ttcgtccatg ccgcgtgggt
    30601 gttttgtgtg tcgccttttt gcagcgcgag aatctctacc tcaaatccca tatcaataaa
    30661 cgcggtaatt tggttaagga cgaaggtttc tgacgacagc gggaatttca gtaaaaagaa
    30721 gccgaccttc atttcacctc cccgatgcgc tcaagcacag actgcaccat ctgcattcct
    30781 gtctgacgct cacgactgac ggcttcacta agtcgcgcat tcagtgccgg aagctggcct
    30841 aaggtatccg caaccatcgc ttgcaggctg ccgtctaata aatgacggat atcaattgcc
    30901 atctccggta gtcccagctg ctgcataatc ccggcggatt tatgttcgta gttgatggca
    30961 attgccggag tggcaaaatt catcgagata atggcagagt gcaggcgcgt accgacggtg
    31021 agttcacagg caccgagaat tttgcccatt tccagatcgt tgagttcatc catcaccaca
    31081 tggtaacggg caggatcgct gatgtgctgg cgaagattga gcgccatcat gcggtcgtct
    31141 ttgttatagc tgtcgatacc cgtacaggtg gagagtgcaa tgacctgata gccttcgtcg
    31201 agaatgcgat tgaccacccc ggcaaaggct ttttcatacg cttgttgagt ggtgccgagg
    31261 cgtttgtcaa acggtgccag ttcgcgcagg gtaattgcta ccgttttctg ttgtgcggca
    31321 acgtccagcc agtgttgaac agcatagctg gcggtgaagt cttcggtgtg gtgatcgacc
    31381 agccacgcgg tatcgacgcc atgttccact tttgcggtag tgatattgct gcgtttcatc
    31441 agatcaagac tgaccgattc gcgcaggatc agcgcgtcac agtgaccaaa aacgtagttc
    31501 gccagttggt taaattgctc atcctggaag gggccgacgc tgtgaccaat cataaacagc
    31561 ggctttttcg ccataaacgt gcaaagcgca tgttcaaact gcggcacgcc gtagagatcg
    31621 acaaaaaacg atcctccgac ctgaataatg gcgtcgtaac ctgagagcag gcgcacgaag
    31681 tcggtgaatc cctgggcgat ggcgatatta cgcagcttgc cagtgtcggt gacgcgtgag
    31741 agcaatacct ggtgttgata gcggcgacgg aggacttttt taacgcgccc gacaacgccc
    31801 gccgcgctgt tgtgttgttt catttgcagg aacagaggat cgcccattac cgggcggttg
    31861 agtagccagg aagaactgac cggatagcgg ctcatcacgt ccacttcggc ttgtggattg
    31921 aggatgttga tggcatcaag taagccgcgc aagatggcgc tgtcgccacg attgccgcaa
    31981 gtgtggttgc ccagaataag taatttcatt ttttcctcat aaatttgatg ccaagtgagg
    32041 ctgtgtttgt tttgttcgtt gccgcttttt gcctgatgcg acgctgacgc gtcttatcag
    32101 gcctacaaga cccgagcaca gaaccgtagg ccggataagg cgttcacgcc gcatccggca
    32161 ttcagtgcct gatgcgacgc tgacgcgtct tatcaggcct acaggtcccg agcacagaac
    32221 cgtaggatgg ataaggcgtt ttacgccgca tccggcaacc gttgtcggaa ccgaaaacag
    32281 caactcaccc cgcccgtaaa agcattttca ttttttcgct gcgacaaaac tgacgcttca
    32341 cttccaccac cagcggatgg cgcgacagca caatcatcac cacaaacgcc agcacgcccg
    32401 cggctatttg caccgccagc agcatcccca gcgccagttg ccctttcagc acaatgccca
    32461 gcgcataact gaccaccagc gtcggcaacg agagataaaa cggcagccac aaactcagga
    32521 tgtactggcg ataactggaa ccaagaaccg gtttaatcat cacgaagtaa ctcagaatgg
    32581 tgttgataat ctgcaccagc aggaaaccga gcgtgacgcc gattgcgccc gccatctgcc
    32641 caccaataac aatcgccgga ataaacagaa atgttttgaa tacgttgaat ttaaagctga
    32701 tatcgacccg cgctttcgcc atcagcagcg aaccaatcgg gttacccacg gagcgcagta
    32761 gccccaccac acacagaaat tgcagcaccg gaataatgct gttccacttc tcaccaaaga
    32821 ccagtggtac aaagttattc gacaccacca ttagcccgag cagcgccgga aagttgataa
    32881 tccccaccac cgacagcggt ttgtagaagt taatacgcag cttttcggtg tcgtcctgaa
    32941 ttttggcaaa cgccggaaac aacacacggg tgatgattgg gttcagcttc atcggcggca
    33001 caacggccac gttgtaagcc aggttgtagc cccctgccac gcccgcgccg agaatacgcg
    33061 ccagcaccag cgttgaaagg ttggtattga gatagttgat gatgctgtcc gccgtcagcc
    33121 aggcaccaaa gcgtaagttc ggtgccaccg acgccagcga gaaatgcaga ccggggcgat
    33181 aaattttgcg gccaaagtag ccaaacagca gcgttctcac cgcactattg accagataac
    33241 cgaggatcgc ggtcatcgcc agcggccaga aatgggcgct aaccaccgta aaagtgaagc
    33301 ccgccagtac cgcgctggtt tcgatcatgc cgattttgtt gaactccagc tccttttgca
    33361 tcaacgcgcg gaactgctgc ccctggggga tcaccacaaa cgccagcgac aatgttttaa
    33421 tcaacggtgc caggtccggg ttattcagca cgtcgccgat gagatcactc aacaaaaaca
    33481 ccgccagaca caccacaagc cccagcccga cgttcagcca gtacagcgtg gtgagttcaa
    33541 ggtggctgat ttcttttcgc tgaataatcg agttagcgat accgaagtca gaaagcgtat
    33601 ctgccagcgc gatgatcacc agcgacacag taagcaaacc gaactggtgg ttgtcgataa
    33661 tccgcgccag cacggtcatc tgcaccagcc cgaggccgat gatgatcacc gtggcaatcg
    33721 ccgaccactt cgcgccgctg atggtttttt cacgtaagct catatcaata tgccgctttg
    33781 ttaacgaaac ctttgaacac cgtcaggaaa acgattttga tatcgaacca gacgctccat
    33841 tcacggatgt actcaaggtc gaactcgacg cgtttttcca ttttctccag cgtgtcggtt
    33901 tcgccgcgcc agccgttaat ctgcgcccag ccggtaatgc acggtttcac tttatggcgc
    33961 agcatgtagc cttcaatgag ctggcgatac tgttcgttat gcgctactgc gtgcggacgt
    34021 ggaccgacaa tcgacatccc cccggtcagc acattgataa actgcggtaa ttcatccagc
    34081 gaggtgcggc gcagaaagtt ccccacttta gtgacgcgcg gatcgttctg cgtcgcctgg
    34141 gtcaccactt tgtcgttctc catcactttc atggaacgga acttccacac tttgatcggc
    34201 ttgccatcca tgccgtagcg agtctggcgg aaaataaccg gccctggtga actgagtttc
    34261 accgccagcg caatacagca cagcaccggg gagatcagca gcaagatcag cgtcgccagc
    34321 acaatgtctt ccgcacgttt tagcaggcgg ttaaccccgg aaagcggcgt gtcatacagc
    34381 ggcaccaccg gaacgccgtt catctcttcg agacgtgaat ggagaatatt gaaggtaaag
    34441 acatcgggga tcagcagcac cgaacaggtg gtgtccgcca gttgatggac cagttttttc
    34501 actcgcgcgc cgtcgcacat ttgcatcgcg atatagacgt tatgaatctt acccgcttta
    34561 gcatcctcga ccagctgttg cagattgccc gcccagtcgt tagaaacacc gcccggtttc
    34621 gggtcgtggt aaacgcccac cacttcaaac cctaaccacg gctgattacg gaagctctcc
    34681 atcagcattt gtccggcggc taaatccccc gccaccgcga ccatgcgctt gttatagcca
    34741 tgattacgca gccagcccgc cccaatgcga atacatgaac ggcaaaccac cagtccgata
    34801 ctggtcagcc cataccacgc cagccagatt ttcagttgcg tgtcgaaatc attgttgaac
    34861 gccaccagtc cggcgctgaa aatcacgctt aaggtccagt tttgtagcaa cagggcaaat
    34921 tctgtcgctg cccgaacacc gcgccatgag cgataaaaat cggtgatgcc gcccagcatc
    34981 tggaacacca ccagcgtaat caacgccacc aacaggtgca tgtagaggaa tgacagtccg
    35041 ctcacttcgc aaaccagcca tagtccggca aacatgatgg tgatatctga aaagcgttgc
    35101 accatagaga ttaacgatgc attggttttc gctcgcgctt ttttagattt gtcatcgttg
    35161 ttcctgttat tagcccctta cccgcagtgg ggtaagggaa gatccgacat tactcgttca
    35221 gcaacgtcag cagagttcgc gttcgcgctt ccatcagcgg cacatcaccg cgtgattcca
    35281 cattcaaccg caccaccggt tcggtgttgg aggagcgcag attaaagcgc cagtcggcaa
    35341 aggtcatgct gatgccatcg gtgcgatcca ccgccagcgc atcacggcta aaatgctgtt
    35401 ccacgcggtt aatcgcctca acgggttgcg ccagtttgct gttgatctca ccgcttgccg
    35461 gaaacgccgc catccggtcg cgcaccagtt cgcccagcgt ttttcctttc aggcacacca
    35521 gttcggcgac cagcagccac gggatcatgc cgctgtcgca gtaagcgaaa tcacggaagt
    35581 aatggtgggc gctcatttcg ccaccgtaga tggcgtcttc cttgcgcata cgttctttaa
    35641 taaaggcgtg tccggttttc gacatcaccg acgtgccgcc agcggcagtc accacatcaa
    35701 cggtattcca ggagagacgt ggatcgtgga tgatcttcgc gccgggattt ttttcgagga
    35761 acgcttctgc cagcaggccg acaatgtagt agccttcgat aaactgccct ttttcgtcaa
    35821 acaggaagca gcggtcaaaa tcgccatcaa aggcaatgcc catatccgcg ccgtgtttga
    35881 tgaccgcatt gcgggtgtcg tcgcggcatt ccggcagtag cgggttagga ataccgttgg
    35941 ggaaattgcc gtccggcgtg ttgtgcactt tgattaattc cacgggtgcg ccaagggctt
    36001 taaagcgggc ttcaatggcg tccaccaccg gacccgctgc gccattcccg gagttaatca
    36061 ccagcttgag cggcgtgagg tttttgacat tgatataacc gaacaggtga tcaacgtaag
    36121 cgtcacgcag gttgatttgc tgatagcgac cgcgtttggt ttcatcgacg ggaggaaagt
    36181 cgttggcttc agccagacgc tggacgtcgc gcagtccggt atcaccgctg atcgggcgag
    36241 ccccttcgcg caccagcttc atgccgttat aatccatcgg attatggctg gcggtgactt
    36301 caatgccgcc atccacgccg agatggaacg tggcgaaata gatctcttcg gtgccggaca
    36361 taccgatatc cagcacgtca acgcccgcat cctgtaaacc ttttgccagc gccagtttta
    36421 aggtttcgct ggtgagacgg acatcaccgc ctaacacaat ggttttcggt ttgagaaatt
    36481 cgccataggc gcgaccaatg cgccaggcga tatcttcatt cagttcttcg cctaatttcc
    36541 cgcgaatatc ataggcttta aagcaggtta attttttcat gtcgttaccc tttttcaggc
    36601 aatagttggc cctgaccgaa acgaccaatt ttgtttttgt cgttatttac atctcggttt
    36661 cgcattcatt gcctgatgcg acgctgccgc gtcttatcag gactacaaac ccgaaccgta
    36721 ggtcggataa ggcgttcacg ccgcatccga caaacagcgc ctgatgcgac gtttacaccc
    36781 gtccgtagcg atccgcgaag cgcaccacat catcctcttc gagataagag ccggagcgca
    36841 cttcaattaa atcaagcgga attttccccg gattttccag gcagtgcgtc gcccccagcg
    36901 gaatataaat ggactcgttt tcaccaagca gtttgatatc accatcaatg gtgacttttg
    36961 ccgttcccgc gaccactacc cagtgttccg cgcggtgatg gtgcatctgt accgacaaac
    37021 cctcgcccgg tttcacggtg atgcgtttca cctggtagcg gtcgcccgcg tcgatagagt
    37081 catatttgcc ccacggacga tacacttcgc gatgcacccg atgctcatgg cgaccatcgg
    37141 ctttgatctg ctcgaccact tttttcacat cctgtaccgc gttacggtcg gcaatcagca
    37201 ccgcatcttt ggtctgcacc actaccagat ctttcacccc gacggtggtg accaggccag
    37261 attcggcata cacatagctg ttttcagttt tgtgattaat cacatcgccg tggcaaacgt
    37321 tgccctcggc ggtgtgggcg ctgatctccc ataatgaaga ccaggaacca acatcgctcc
    37381 agcccgcatc catcggcacc acaacagcat ctgccgtacg ttccatgacc gcgtaatcca
    37441 ccgactcttc cgggcaggcg agaaacgctt cttcatccac acgaataaaa tcaagatccg
    37501 gatcgacgga gctcatcgct ttttcacagg catcgagaat atccgggcga tattttttca
    37561 gttcttcgag atagcgtccg gcgcggaaca ggaacatgcc gctgttccag taatattcgc
    37621 cgcttgccac ataggcctgg gcggtttcca gattcggttt ttcgacaaac tgcgccactt
    37681 caaaggccac cgtatcctgc tcacccgcag acacttcacc gcgacgaata tagccataac
    37741 cggtttctgg tagatccggc acaatgccaa aggtcaccag cttgcccgct tcggcatatg
    37801 gcatggcatt acgcacggcg gcacggaacg cgtcttcatc ggcaattaca tgatccgccg
    37861 ccagcaccag cattaacggg tcgttctccg ggctatgacg ttttgccgcc agcgccgcca
    37921 gcgcaatggc cggtgcagtg ttacgccctg caggttcgag aataatgttc tcggtgagtt
    37981 tgttcagttg acgcagctgt tccgcgacaa taaagcggtg ctgctcattg caaatcacca
    38041 ccgggctttc gcactccacg ccgttcaggc ggcagatggt ggtttgcagc atggtgagat
    38101 cgcctttcag gcataaaaac tgcttggggt aaagtacgcg ggaaagcggc cataagcggc
    38161 taccggagcc acctgccatc acaactggat agagtttcga ctgcgccata attatccccg
    38221 aatatcattt ataaattgac gtaacacgtt ctctttatcg agcgtgcgtt cggcatattc
    38281 acgtgccacc gtgttgtgtt tgggcagcag gagcgcctga ctaatccccg ccaccagcgc
    38341 ctcgaccgat tccggctcta cgcaaaccgc aatgcccgga aaggtttcgc aaagctgccc
    38401 cagttctgtg tgggcttctg cggtaatcac cgcgttaccg cctaccgcca gaatattggt
    38461 cagtttcgac ggcaatacgg catctgccgc gccgcatttt tgcaccacca gatggcaatc
    38521 gcccatcttc agcagtgcgg gtaaagcgtc atacgattgc agcgggaaaa attgcatgtt
    38581 gcgcagtcca cgctgctgcg ccattttttc cagccgcgct ttgccgccgc cctgcccgac
    38641 aatggcaaaa atcagcggtt catcgcgcag gcgatcggca gcttcaataa cgttttccag
    38701 tccctgcttt tcaccaatat tgccggagta aagaatgatt tttttgttat ccggtaggcc
    38761 aagctggtta cgaagggcat caacatcggc gtctgcaaca tgctgaaaac gggcgatttc
    38821 cgaccagttg gggaagaaaa tgatgttatc cgccgccacg cctttttcga tggctttatt
    38881 catcatcgaa cgcgaaatcg tggagacgtt atcgacgtta tgcagtccgc tacgttcgaa
    38941 cgccgttgcc agctgtgcca ctttgccgcc tttgcctttt ccggcaaggc ccagccccag
    39001 catggcgtcc acttcgtaat cctgaatatg cagcacggta cgcgcaccag agagtttcgc
    39061 cagcaggcgc attcccggcg tgcaaaacag cgttggcacc acgccgataa tgcgatccgg
    39121 cttccagcga cgttgcgcca tcaacgggaa aaaactgctg acggcaaaac cgccgagatg
    39181 caacaggcgt ttcagggtgc tcggctgttt tggcacgtac agcgggcagc gccacaccgt
    39241 ggcggccccc tcttctcgtt tgtagcgcta ggcggaatag ttctcgccca cctgccactg
    39301 cgggtagtaa ggcggtgcgg taataacccg cacctcatga ccttgcgccg ccagccattc
    39361 caccatttct ccggtgtatt tgccgatgcc ggttaactcc ggcgagtagt taatgccgta
    39421 gaccagtatt ttcataatcc gggtactccg gcacgcttct cagcgagaaa ataggcgcgg
    39481 ctgttagcgt gaacattgtc actggcgagc agtgcgtccg gcgtcagcca gcggtaatcg
    39541 tcatgctgct catccggcag taacagttct tcttccgcta ctctgaagcg aaaaccgagc
    39601 accacatagt gagtggtgaa atccgtgcca gagaagttat cgtcataaaa gtgctgccag
    39661 acaccgtaaa actggcctgc tgttatcggc agacgcagcc ccagttccgc catcgtcagc
    39721 cgctcaaatg cggcttccag cgtttcgtct ttctgcacgc gccctcccgg cacaaaccag
    39781 taaccctgcg ccgggcggtt ggttcttttg ccaggcagaa actcgccgcg actgttctcg
    39841 acaataaagt cgagagagac aagcggtgtg gagcgcacta ccgtggcaaa gtcttcctga
    39901 cgtaaaaaca tcattacccc cgaaagcggt cttgattctc aaggaaccac tggtaagtgc
    39961 tggcaagccc cgcttccagt gagatttcgt gataccagcc aagctgatgc aggcgcgtca
    40021 catcaagcag tttgcgcggc gtaccatccg gtttactggc atcaaaaacc acccgacctt
    40081 tgtaacccac cactttggcg atggtttgcg ccagctcgcg gatagtgcag tcaacgcccg
    40141 tgccgacgtt aatgtgcgac agcatcggct gggtgttttc cagccagact tcgtgcgcca
    40201 gctccatcac atgaatgctc gccgccgcca tatcatcgac gtgcaggaat tcacgcatcg
    40261 gtgtaccgct gccccacacc accacgtccg gcgcattctg tgccgtcgcc tcgtggaagc
    40321 gacgcagcaa tgctgggatc acatgcgaat tactcgggtg gaagttgtca tgcgggccat
    40381 acaggttggt cggcatgacc gagcggtaat ctcgtccgta ctggcgattg taagattcgc
    40441 acagtttgat cccggcgatt ttggcaatgg cgtaaggctc gttggtcggc tccagcgtgc
    40501 tctgcaataa ctcgctttct gccatcggct gttttgccag tttcgggtag atgcaggacg
    40561 atccgagaaa cagcagtttg ttcacgtcgt tctgatgcgc ggcgtgaatg atgttgctct
    40621 caatcatcat gttctggtag atgaaatccg ccggataggt gttgttggca acaatgccgc
    40681 ccactttcgc cgccgccaga tagacctggt caatgcgttc gctggcaaag aaatcatgca
    40741 cggcgcggct gtccagcagg ttcagctcgt cgcgggtacg taataccagc tccacatcac
    40801 cgcgctgttc gagctgccgc ttgatggcag aaccgaccat cccacgatgg ccagcgataa
    40861 aaatgcgttg tttactcatg cttatgactc cagcgcgatc gccacgtcgt agccgtgaga
    40921 tttcagcaga gagtgttttt tcgccgcttc gaggtcatta gccaccattt cagacaccat
    40981 ctctctgagg gtgatttccg gtttccagcc cagtttttcg tgcgctttgg tcgggtcgtc
    41041 gagcagcgtt tcaacttctg ccggacggaa gtaacgcgga tcaacggcga taatcacatc
    41101 acccggttta acgcccggcg cgtcatgccc ggtgacggaa accacaatgc ccttctcttc
    41161 aacacccgtg ccttcaaagc gcagtttgat gcccagctgt gccgctgcca tttccacgaa
    41221 ctgacgtacg gagtactgaa cgccggtcac gataacgaaa tcttccggct gttcctgttg
    41281 cagcatcatc cactgcattt ttacgtagtc tttggcgtgg ccccagtcac gcagggaatc
    41341 catattgccg aggtacaggc acgactccag cccctgggcg atgttggcga ttgcgcgggt
    41401 gattttgcgg gtaacgaagg tttcgccgcg gcgcggggat tcatggttga agagaatacc
    41461 gttacaagcg tacatgccgt aggattcgca gtagttaacg gtgatccagt aggcgtacag
    41521 tttggcgacc gcatacggag atcgcgggta gaacggcgtg gtttctttct gcggaatttc
    41581 ctgcaccaga ccatacagtt cagaggtgga agcctgatag aaacgagttt tcttttccag
    41641 accgaggaag cggatcgcct ccagcaggcg cagcgtaccc atcgcgtcga cgtcagcggt
    41701 atattctggt gactcaaaag agaccgcaac gtggctcatt gcgcccaggt tgtacacttc
    41761 atccggctgt acttcacgca aaatgcgcgt caggttagag gtatcactca ggtcgccata
    41821 atgcagatgg aatttcgggt tgcaggtgtg cggatcctga taaatgtgat ccacgcgctc
    41881 ggtgttgaat gacgatgcgc gacgcttaat accatgcacc tcgtaacctt tttccagcag
    41941 aaactctgcc aggtaagaac cgtcttgtcc ggttacaccg gtgatgagag cgacttttga
    42001 catgtcttat tcctctgtat ttttgaattt attcagtttc aacgcgttcg cgtatcacca
    42061 ctgcgggatt cccccggcaa accacattta ccggaagcga tttaaaaaca ctgcttcgtg
    42121 cacccacgac ggtgccgtcg ccgattgtga cgcctggggc aacaaagaca tcggttgcca
    42181 gccagcattt ctcgccaatc acaataggcg
//
LOCUS       DADMIB010000012        41642 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.012, whole genome shotgun sequence.
ACCESSION   DADMIB010000012 DADMIB010000000
VERSION     DADMIB010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 41642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41642
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.012"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..255
                     /locus_tag="JNZ89_000693"
     CDS             <1..255
                     /locus_tag="JNZ89_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
                     /protein_id="HAY8934650.1"
                     /translation="IRGEVELVRIRDAEGRIAAEGALPYPPGVLCVVPGEVWGGAVQR
                     YFLALEEGVNLLPGFSPELQGVYSETDADGMKRLYGYVLK"
     gene            complement(305..1561)
                     /locus_tag="JNZ89_000694"
     CDS             complement(305..1561)
                     /locus_tag="JNZ89_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HAY8934651.1"
                     /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY
                     SSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILIN
                     SFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHM
                     QLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSM
                     LLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLS
                     RYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVE
                     KEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSV
                     VLAFAFMAMFKYKHVRVPTGTQTVSH"
     gene            complement(1763..2842)
                     /gene="mltC"
                     /locus_tag="JNZ89_000695"
     CDS             complement(1763..2842)
                     /gene="mltC"
                     /locus_tag="JNZ89_000695"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417438.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HAY8934652.1"
                     /translation="MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQF
                     AHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRA
                     IIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLK
                     NRLQSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTES
                     SFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAM
                     LNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLT
                     TRHPSAESRRYLYKVNTAQKSYRRR"
     gene            complement(2907..3182)
                     /locus_tag="JNZ89_000696"
     CDS             complement(2907..3182)
                     /locus_tag="JNZ89_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HAY8934653.1"
                     /translation="MSRTIFCIFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH
                     KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK"
     gene            complement(3210..4262)
                     /gene="mutY"
                     /locus_tag="JNZ89_000697"
     CDS             complement(3210..4262)
                     /gene="mutY"
                     /locus_tag="JNZ89_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HAY8934654.1"
                     /translation="MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ
                     VATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG
                     KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
                     ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSL
                     YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQ
                     RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA
                     APVERLLQQLRTGAPV"
     gene            4423..5142
                     /gene="trmB"
                     /locus_tag="JNZ89_000698"
     CDS             4423..5142
                     /gene="trmB"
                     /locus_tag="JNZ89_000698"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HAY8934655.1"
                     /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
                     MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA
                     CLASAHEEGLNNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP
                     FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK
                     FEQRGHRLGHGVWDLMFERVK"
     gene            5142..5468
                     /locus_tag="JNZ89_000699"
     CDS             5142..5468
                     /locus_tag="JNZ89_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF469 domain-containing protein"
                     /protein_id="HAY8934656.1"
                     /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD
                     FINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSEL
                     FDVWWD"
     gene            5652..6371
                     /locus_tag="JNZ89_000700"
     CDS             5652..6371
                     /locus_tag="JNZ89_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 domain-containing protein"
                     /protein_id="HAY8934657.1"
                     /translation="MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGE
                     NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIAL
                     DKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLV
                     NQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGK
                     DVCSRVVTLEDSRKALVGNLK"
     gene            6547..7593
                     /gene="ansB"
                     /locus_tag="JNZ89_000701"
     CDS             6547..7593
                     /gene="ansB"
                     /locus_tag="JNZ89_000701"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HAY8934658.1"
                     /translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK
                     SNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKT
                     DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD
                     KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK
                     HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVF
                     DTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
                     TKDPQQIQQIFNQY"
     gene            7710..8717
                     /locus_tag="JNZ89_000702"
     CDS             7710..8717
                     /locus_tag="JNZ89_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1202 family protein"
                     /protein_id="HAY8934659.1"
                     /translation="MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILK
                     LDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAM
                     LTSKGTPASGWSVNFYSFQSAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN
                     TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNK
                     QNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS
                     RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGVI
                     K"
     gene            complement(8872..10008)
                     /gene="hemW"
                     /locus_tag="JNZ89_000703"
     CDS             complement(8872..10008)
                     /gene="hemW"
                     /locus_tag="JNZ89_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HAY8934660.1"
                     /translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
                     CDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP
                     GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
                     NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW
                     DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG
                     RILRTTKTRHPRGFMQGRYLESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLC
                     EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE"
     gene            complement(10001..10594)
                     /locus_tag="JNZ89_000704"
     CDS             complement(10001..10594)
                     /locus_tag="JNZ89_000704"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HAY8934661.1"
                     /translation="MQKVVLATGNAGKVRELASLLSDFGLDIVTQTDLGVDSAEETGL
                     TFIENAILKARHAAKVTGLPAIADDSGLAVDALGGAPGIYSARYSGEDATDQKNLQKL
                     LETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
                     FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
     gene            complement(10602..10892)
                     /locus_tag="JNZ89_000705"
     CDS             complement(10602..10892)
                     /locus_tag="JNZ89_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417428.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggU family protein"
                     /protein_id="HAY8934662.1"
                     /translation="MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD
                     GQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN"
     gene            complement(10889..11455)
                     /gene="yggT"
                     /locus_tag="JNZ89_000706"
     CDS             complement(10889..11455)
                     /gene="yggT"
                     /locus_tag="JNZ89_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic shock tolerance protein YggT"
                     /protein_id="HAY8934663.1"
                     /translation="MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVT
                     QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTI
                     GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
                     LLYVINMGVAEVLQATGNILLPGMWMAL"
     gene            complement(11473..12177)
                     /gene="yggS"
                     /locus_tag="JNZ89_000707"
     CDS             complement(11473..12177)
                     /gene="yggS"
                     /locus_tag="JNZ89_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate homeostasis protein"
                     /protein_id="HAY8934664.1"
                     /translation="MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIA
                     EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
                     IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
                     RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM
                     VRIGTAIFGARDYSKK"
     gene            12195..13175
                     /locus_tag="JNZ89_000708"
     CDS             12195..13175
                     /locus_tag="JNZ89_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HAY8934665.1"
                     /translation="MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDALDV
                     EELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ
                     LEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
                     YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETG
                     HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVAL
                     FELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQRVGEGRL"
     gene            complement(13351..13767)
                     /gene="ruvX"
                     /locus_tag="JNZ89_000709"
     CDS             complement(13351..13767)
                     /gene="ruvX"
                     /locus_tag="JNZ89_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HAY8934666.1"
                     /translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNL
                     IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE
                     ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY"
     gene            complement(13767..14402)
                     /locus_tag="JNZ89_000710"
     CDS             complement(13767..14402)
                     /locus_tag="JNZ89_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708713.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HAY8934667.1"
                     /translation="MTAPFFPRILGAVAFLNQETEPLTMNLQHHFLIAMPALQDPIFR
                     RSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPL
                     AEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKG
                     QLEQEILDNAWLTASADLNILFKTPIADRWREAAKLIGVDILTMPGVAGHA"
     gene            complement(14439..15389)
                     /gene="gshB"
                     /locus_tag="JNZ89_000711"
     CDS             complement(14439..15389)
                     /gene="gshB"
                     /locus_tag="JNZ89_000711"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HAY8934668.1"
                     /translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY
                     LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVLLMRKDPPFDTEFIYATYIL
                     ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK
                     PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP
                     VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG
                     DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ"
     gene            complement(15402..16133)
                     /gene="rsmE"
                     /locus_tag="JNZ89_000712"
     CDS             complement(15402..16133)
                     /gene="rsmE"
                     /locus_tag="JNZ89_000712"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311849.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HAY8934669.1"
                     /translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD
                     GSNQVFDAEITSASKKSVEVKVLEGKIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
                     GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC
                     AEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG
                     PRVLRTETTALTAITALQVRFGDLG"
     gene            complement(16213..16920)
                     /gene="endA"
                     /locus_tag="JNZ89_000713"
     CDS             complement(16213..16920)
                     /gene="endA"
                     /locus_tag="JNZ89_000713"
                     /EC_number="3.1.21.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease I"
                     /protein_id="HAY8934670.1"
                     /translation="MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPG
                     TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG
                     RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK
                     AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV
                     QGNHNPYVQRACQARKS"
     gene            complement(17015..17512)
                     /locus_tag="JNZ89_000714"
     CDS             complement(17015..17512)
                     /locus_tag="JNZ89_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HAY8934671.1"
                     /translation="MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG
                     TSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM
                     MENVQGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGE
                     QLVAK"
     gene            complement(17589..18983)
                     /locus_tag="JNZ89_000715"
     CDS             complement(17589..18983)
                     /locus_tag="JNZ89_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HAY8934672.1"
                     /translation="MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIA
                     DEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA
                     PNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS
                     DTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTS
                     AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPK
                     IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVL
                     GTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA
                     TNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERN
                     LMKGRKLREIGAHD"
     gene            complement(19419..20573)
                     /gene="metK"
                     /locus_tag="JNZ89_000716"
     CDS             complement(19419..20573)
                     /gene="metK"
                     /locus_tag="JNZ89_000716"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HAY8934673.1"
                     /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET
                     YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
                     INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
                     LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT
                     SATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF
                     DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK"
     gene            complement(20877..21092)
                     /locus_tag="JNZ89_000717"
     CDS             complement(20877..21092)
                     /locus_tag="JNZ89_000717"
                     /inference="COORDINATES: protein motif:HMM:NF037550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934674.1"
                     /translation="MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPV
                     KTNPQAKTLISTRLEVATRKKRRVLFI"
     gene            21228..21359
                     /gene="yqgB"
                     /locus_tag="JNZ89_000718"
     CDS             21228..21359
                     /gene="yqgB"
                     /locus_tag="JNZ89_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417414.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response protein YqgB"
                     /protein_id="HAY8934675.1"
                     /translation="MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII"
     gene            21368..23344
                     /gene="speA"
                     /locus_tag="JNZ89_000719"
     CDS             21368..23344
                     /gene="speA"
                     /locus_tag="JNZ89_000719"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HAY8934676.1"
                     /translation="MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWW
                     GNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRS
                     INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA
                     HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPR
                     LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQ
                     MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE
                     YANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAE
                     DAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERAWAEQ
                     LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL
                     PLEGLDQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
                     AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQF
                     RDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE"
     gene            23481..24401
                     /gene="speB"
                     /locus_tag="JNZ89_000720"
     CDS             23481..24401
                     /gene="speB"
                     /locus_tag="JNZ89_000720"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HAY8934677.1"
                     /translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
                     ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
                     EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
                     FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQ
                     IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
                     PAYDQSEITALAAATLALEMLYIQAAKKGE"
     gene            complement(24607..25365)
                     /locus_tag="JNZ89_000721"
     CDS             complement(24607..25365)
                     /locus_tag="JNZ89_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HAY8934678.1"
                     /translation="MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQ
                     VKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAF
                     AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
                     GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLA
                     KLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK"
     gene            25643..27634
                     /gene="tkt"
                     /locus_tag="JNZ89_000722"
     CDS             25643..27634
                     /gene="tkt"
                     /locus_tag="JNZ89_000722"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HAY8934679.1"
                     /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
                     LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE
                     VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME
                     GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG
                     HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ
                     LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP
                     SDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG
                     SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL
                     MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
                     RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA
                     AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG
                     LNGAIIGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL"
     gene            27948..28391
                     /gene="cmtB"
                     /locus_tag="JNZ89_000723"
     CDS             27948..28391
                     /gene="cmtB"
                     /locus_tag="JNZ89_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IIA"
                     /protein_id="HAY8934680.1"
                     /translation="MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQ
                     AIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIG
                     LSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISHG"
     gene            28419..29807
                     /locus_tag="JNZ89_000724"
     CDS             28419..29807
                     /locus_tag="JNZ89_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HAY8934681.1"
                     /translation="MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWL
                     PNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSM
                     IMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANT
                     FVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMV
                     ASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIA
                     GGMSGTWMFNLLDGGLVAGPSLGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLI
                     LKMEKTVETESEDEFAQSANAVKAMKQEGAFSLSRVKRIAFVCDTGMGSSAMGATTFR
                     KRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLD
                     TLFNQLTAEHKH"
     gene            29822..31099
                     /locus_tag="JNZ89_000725"
     CDS             29822..31099
                     /locus_tag="JNZ89_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HAY8934682.1"
                     /translation="MKTKVAAIYGKRDVRLREFELPEITDNELLVSVISDSVCLSTWK
                     AALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSG
                     YSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLVEPMCCIIGAYHANYH
                     TTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQV
                     QKLLPVDLAASKGIELVYVNTKGMSDPVQTLRALTGDVGFDDIFVYAAVPAVVEMADE
                     LLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQL
                     QPSFMVTHIGGLDAVPDTVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKE
                     LARLVEETHGIWNEQAEKYLLAQFGIDIGEAAQ"
     gene            31096..32061
                     /gene="yggF"
                     /locus_tag="JNZ89_000726"
     CDS             31096..32061
                     /gene="yggF"
                     /locus_tag="JNZ89_000726"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HAY8934683.1"
                     /translation="MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALN
                     DVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAV
                     MAFAPRDSLLHAPDMYMKKLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVT
                     LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISAC
                     AVKALGGDMQAELIDFCQAKGDYTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGND
                     ILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH"
     gene            32083..32592
                     /gene="fumE"
                     /locus_tag="JNZ89_000727"
     CDS             32083..32592
                     /gene="fumE"
                     /locus_tag="JNZ89_000727"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarase E"
                     /protein_id="HAY8934684.1"
                     /translation="MAKLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVD
                     NDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQD
                     ETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFAVWSEARFSGMVKTALTLAV
                     TTILKELTP"
     gene            32589..33302
                     /locus_tag="JNZ89_000728"
     CDS             32589..33302
                     /locus_tag="JNZ89_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside/nucleotide kinase family protein"
                     /protein_id="HAY8934685.1"
                     /translation="MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRT
                     VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA
                     PETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK
                     WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEES
                     LPANLTLMMTATGEYRLVD"
     gene            complement(33274..33951)
                     /locus_tag="JNZ89_000729"
     CDS             complement(33274..33951)
                     /locus_tag="JNZ89_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708691.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HAY8934686.1"
                     /translation="MLTLNQISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKST
                     LLRVMAGLLTPTAGTVMLQQQAMKNLKNRQRAAKVGVLFQEAENQLFHSTVADEIAFG
                     LKLQKCPADEITQRTHAALQCCQLADTANSHPLDLHSAQRRMVAVACLEALSPPLLLL
                     DEPSRDFDENWLSVFESWLEKCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGVIRNVN
                     PPDDIHP"
     gene            complement(33945..34622)
                     /locus_tag="JNZ89_000730"
     CDS             complement(33945..34622)
                     /locus_tag="JNZ89_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HAY8934687.1"
                     /translation="MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTL
                     AQLMAGWYPDFLPGEITGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVE
                     EEVAFGPENLCLAEAEIMARIDAALTLTECQPLRHRHPATLSGGETQRVVIACAIAMQ
                     PKLLILDEAFSRLTPQASEMLLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQN
                     GALQPLC"
     gene            complement(34610..35317)
                     /locus_tag="JNZ89_000731"
     CDS             complement(34610..35317)
                     /locus_tag="JNZ89_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HAY8934688.1"
                     /translation="MHPFTSLILWALAACTTLILPAQTILPIYSAATFFCLIALKATR
                     RRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSPERWSHAITLWLRILAIVSTSQL
                     WMQYVPVQCFIRALFASRLPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEG
                     WYQRLRAMPALIIPLTHNALNDLAVRGAALDMRAFRIHNRRTTLWAPADSTLQRVARY
                     TMILLMLTEFGAWIWLR"
     gene            complement(35318..35896)
                     /locus_tag="JNZ89_000732"
     CDS             complement(35318..35896)
                     /locus_tag="JNZ89_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HAY8934689.1"
                     /translation="MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLI
                     SAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKV
                     VVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
                     VDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR"
     gene            complement(35919..36350)
                     /locus_tag="JNZ89_000733"
     CDS             complement(35919..36350)
                     /locus_tag="JNZ89_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8934690.1"
                     /translation="MMTLPYPYSSSARFYALRLLPGQEVFSQLHAFAQQHQLHAAWIA
                     GCTGSLTDVALRYARQEGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTMLGGHM
                     MPGCTVRTTLELVIGSLEELAFSRQPCALSGYDELHISPVK"
     gene            36722..37741
                     /gene="epd"
                     /locus_tag="JNZ89_000734"
     CDS             36722..37741
                     /gene="epd"
                     /locus_tag="JNZ89_000734"
                     /EC_number="1.2.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythrose-4-phosphate dehydrogenase"
                     /protein_id="HAY8934691.1"
                     /translation="MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM
                     AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV
                     YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI
                     IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG
                     ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV
                     DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
                     TVAFR"
     gene            37791..38954
                     /gene="pgk"
                     /locus_tag="JNZ89_000735"
     CDS             37791..38954
                     /gene="pgk"
                     /locus_tag="JNZ89_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HAY8934692.1"
                     /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI
                     ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
                     EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
                     ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
                     NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVND
                     VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
                     FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
     gene            39169..40248
                     /gene="fbaA"
                     /locus_tag="JNZ89_000736"
     CDS             39169..40248
                     /gene="fbaA"
                     /locus_tag="JNZ89_000736"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HAY8934693.1"
                     /translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN
                     AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG
                     VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK
                     YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
                     IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLSFVFHGGSGSTAQEIK
                     DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW
                     LRAGQTSMIARLEKAFQELNAIDVL"
     gene            40606..41466
                     /locus_tag="JNZ89_000737"
     CDS             40606..41466
                     /locus_tag="JNZ89_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive channel MscS"
                     /protein_id="HAY8934694.1"
                     /translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII
                     ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA
                     AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG
                     KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD
                     REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
                     FKRVKEDKAA"
BASE COUNT        10191 a        10411 c        11091 g         9949 t
ORIGIN      
        1 attcgcggtg aagtggagtt ggtgcggatt cgtgatgccg aagggcgaat tgcggcagaa
       61 ggggcgttgc cttatccacc tggcgtgctt tgcgtggtac ccggggaagt ctggggtggg
      121 gcggttcaac gttatttcct tgcactggaa gaaggggtaa atttgttgcc gggattttcg
      181 ccggagctgc aaggtgttta tagcgaaacc gatgcggatg gcatgaaacg gttgtacggt
      241 tatgtgttga agtaagaata aaaaaaacgg gtcaccttct ggcgacccgt ttttctttgc
      301 gtaattagtg gctaaccgtc tgtgtgcctg tcgggacacg aacgtgttta tatttgaaca
      361 tcgccatgaa cgcgaaggcc agaaccacgg agtaaccagc gaaaatcaac catacggtct
      421 gccagtcggt aatgccgttt tgggtgtaca tctcaacaac tttaccgctc acgatgccgc
      481 cgaggataca gccgaagccg ttagtcatca tcaggaacat cccttgtgca ctggcgcgaa
      541 ttgccgggct aacttctttt tcgacaaaca ccgaaccaga gatgttgaag aagtcgaatg
      601 cgcaaccgta aacgatcatc gacagtacca gcagtacagt accgaacgga gtcgggtcgc
      661 cgtaagcaaa cagcgcaaaa cgcaggatcc acgccacaat actgatcatc attacgttct
      721 taataccgta gcggcttaag aagaacggga tggtcagaat gaacagggtt tcagagatct
      781 gcgaaatcga catgatgatt gacgcatgct gcacaataaa gctgctggca aacatcggat
      841 ctttgtcgaa gctgtgcagg aaggtattac cgaacatgtt ggtaatctgc agttccgcgc
      901 ccagcagcat tgagaagata aagaagattg ccatacgctt gtttttaaac agcgcgaatg
      961 catcgaggcc cagcagggtt gtccagctct gattcgcttg ctgtttagca accggaatat
     1021 gcggcagagt cagggtaaac agaaccagaa tggcggaaag tgctgcgcca atatacagct
     1081 gcatgtggct taattcgaag ccagacaggc tcaccaccca cattgccatg ataaagccga
     1141 tggtgcccca gatacggatt ggcgggaagt cagtaacgat atccatcccg gcattttgca
     1201 ggcgatagta agagatggtg ttgattaacc caagcgttgg catataagca aacgagttaa
     1261 tcaatatcac aaggaacatc gcctccggtg tcgtgacctg tgccgccatg aacagcgtga
     1321 tagcgccaat ggtgtggcaa atggcatata cccatttcgc acttaaccat ttgtcggcca
     1381 caatccccag cagcgcaggc ataaagaccg ctgcgatacc cagtgagcta taaactgcgc
     1441 caatagaagc accgtcaaac ttcagggtaa caaacatata ggagccgagg gtcgtcagcc
     1501 aacttcccca cagacagaac tgcagaaaag agaggatttt cagctgcagc ttaagattca
     1561 tgttaatttc ctcacatcgt gatgcggatg agtgtttgaa aaagcacatt tgaccgtgcg
     1621 agatgatggg attctatcaa cttcgcggac tggttttttg ttacctgtgg caaataattg
     1681 caaacattcc caatttgcaa aacgaaattg tgatgtggat aacatttttg cccctgagca
     1741 tcgtcagggg cggttaatgg aattatcggc ggcggtagga tttttgcgcg gtattcactt
     1801 tataaagata acggcgagat tccgcagagg gatggcgggt cgtcagcgtc tgataaacat
     1861 cgcccggcgt catggtgtta ataatattgg cagcctgaat cttatcattc gaaaagactc
     1921 gcagcacgct gcctgcgccg ccgttatagg cggtgatgac ggcataacgc cgcgatgttg
     1981 ggttatcaat tccgccgaga taaacattgt tcagcatcgc cagatacgcg gtgccggtat
     2041 caatattgct ggcaggatca aacaagaaac tgcggctcgg cgtgccggat ttcccctgcg
     2101 agcggaacac atctttcccg gcagtatgtt gtaccacctg cattaatccc agcgcatcgg
     2161 aacggctgac cgcatacggg ttaaaggaag attcggtctg cataattgcc agaatcagcg
     2221 actcatcaac gccatatttc cgtgacgcct ggcggaccat gccgagatat ttgtgcgcac
     2281 gtttatcaag gtggttcggt accatgttaa tggtgacgct gtagatgata cgcagcccgt
     2341 tactgcggct ttgcagacgg tttttcagca gataatccgc gaagttgctt gcgcgacctt
     2401 cccagcgaat cggctgcccg gtgttgtcca ccacctgacc gtaaaggaaa ggttctttcg
     2461 aaatcgtaat atcatcaacg tcggaataga gatcgaccga actcggatcg tcacccatca
     2521 gcaacgtttt gataattgcc cggcgcaaat gcgcggcagg ttctgtcccg gcgatagttt
     2581 cgatagtaat cgtaccgtca tcgaagttga tgtggctgcg ggtctgatat tgatcggtgt
     2641 atttcacgta gtccttagga ccggcgatca ccacctcttt gaatccccag atgttctcaa
     2701 tattgtgggc aaattgcccc atcagaatat caaaaccgtt ggtatctttg acccaggctt
     2761 cgttataggt atcgcctttt ttggtcgtcg aacaggagat gagcaacggc gcaatcaaag
     2821 ccagcgcgag atattttttc atcattccgg gtgcgtgttg tgtttgtttt tatgcaagtt
     2881 gccggaggcg tgctccggca ctgtttttat tttttatctt ccggcgtata gccctcgata
     2941 tgcacctctt taccctcgaa caggaagttg accatctcct gctcaagcag cttgcggtgc
     3001 tcggcattca tcatgttgag tttcttttca ttaatcagca tggtttgctt gtgctgccac
     3061 tgcgcccagg cttctttgga gatctcgtta tagatgcgtt ttcccagctc gccggggtac
     3121 agctgaaaat cctgaccttc tgcttcacgt tgcaggaaaa tacaaaaaat cgttctgctc
     3181 ataaatcatc ctctttatcg actcacgcgc taaaccggcg cgccagtgcg taactgctgt
     3241 aacaaacgct ccacgggagc cgccaggcca actgacggcg gttgcgctaa gttataccag
     3301 agcgcattgc cttcatccat gcagccggtg aatgacgaca cgggaagcca cataggcaca
     3361 atatctaagt ggaaatggct gaaggtatgc cgaaacgcgg tcagttgcgt caggttatcg
     3421 gcagcaatct gccgttgcgc cagccactgc cgcaaacttt cttcgtcggc aaactgcggg
     3481 aaacagtata aaccgcccca caatccgctc ggcggacgct gcgccagcaa tacttcatct
     3541 tcgtgctgta acagcaaaaa gtagccggtg cgctccggca gcgtctgttt cggttttttg
     3601 cccggataaa gcgaccagct attattggcg gcggcaatac atccgttttg tagcggacag
     3661 agcgaacatt tcggcttcga gcgcgtacaa atcatcgcgc ccaaatccat catcgcctga
     3721 ttaaaccgtt ccacgccgac cgcgggcgtc acctgctcgc tcaaactcca taatttattc
     3781 tcgacctctt ttttcccagg ccagccgctt acagcatagc agcgcgccag cacgcgtttg
     3841 acgttaccgt cgagaatcgg aaagtgctta cccagagaaa gcgagagaat cgcgcctgcg
     3901 gtggaacgcc cgacgcccgg taacgccgcg acttcttcaa aggtttccgg gaatttaccg
     3961 ccgtgtaagg tcgccacttg ttgtgccgct ttatgcagat tgcgcgcgcg ggcgtaatag
     4021 ccaagcccgg tccacaagtg gagaacttcg tcgagcggcg cattggcgag atcggtcacc
     4081 gtcgggaagc gcgccataaa gcgttcaaaa taggggataa cggtcgcaac ctgagtttgt
     4141 tgcaacatca cttctgagag ccatactttg tagggcgtct tgtcaatttg ccagggcagc
     4201 gtttttcgcc cgtatttatc gtaccagtcc agaacctggg ctgaaaattg cgacgcttgc
     4261 atggtcaccg aattcactgt tgttgggggc aagattgcag cacagcgacg gcagggtgta
     4321 aaccggaact ttccgcagcc acggccttat catgcttgca tccggcaact aactttggat
     4381 aatgcccgtt ttcagaacac tttcacaagc gactaaatct ttatgaaaaa cgacgtcatt
     4441 tcaccggaat ttgatgaaaa cggccgccca ctgcgccgta tccgtagttt tgtgcgccgc
     4501 caggggcgac tgaccaaagg ccaggaacat gcgctggaaa actactggcc ggtgatgggc
     4561 gttgagttca gcgaagatat gctggatttc cccgcgcttt ttggccgtga agcgccggtg
     4621 acgcttgaga ttggttttgg catgggggcg tcgctggtgg caatggctaa agatcgccct
     4681 gagcaggact tcctcggcat tgaagtgcat tcaccgggcg ttggtgcgtg cctggcttct
     4741 gcgcatgaag aaggtttaaa caacctgcga gtgatgtgtc acgatgcggt tgaagtgctg
     4801 cataaaatga ttcctgacaa ttcattgcgc atggtgcagc tctttttccc tgacccgtgg
     4861 cacaaagcgc gccataataa acgccgtatc gtacaggtgc cgtttgccga actggtaaaa
     4921 agcaaactgc agctgggggg cgtattccat atggcgaccg actgggaacc ttatgcggaa
     4981 catatgcttg aagtgatgtc ttctattgac ggttataaaa acctgtcaga gagcaatgat
     5041 tacgtaccgc gtccggcatc acgtccggtg acgaaatttg aacaacgtgg tcatcgtctt
     5101 ggtcacggag tatgggactt aatgttcgag agggtgaaat aatggcaaag aaccgtagcc
     5161 gtcgtctgcg taaaaaaatg cacatcgacg aattccagga attaggattt tcggtggcat
     5221 ggcgattccc ggaaggtaca tcggaagaac agattgataa aaccgttgat gattttatta
     5281 acgaggttat cgaaccgaac aaactggcct ttgacggcag cggttatctg gcctgggaag
     5341 gtctgatctg catgcaggaa atcggcaaat gcaccgaaga acatcaggcg attgtgcgta
     5401 agtggctgga agagcgcaaa ctggatgagg tacgcaccag cgaacttttc gacgtttggt
     5461 gggactaaga aagcatacgg gcgatgacaa atgcaaaact gcctgatgcg ctacgcttat
     5521 caggcctgga aagatgcacg atcgagtagg cgggataagg tgtttacgcc gcatccggca
     5581 tggaaaacgc gtactttgtt atcaatctgg ggccagcaaa tgctggcctg attttttctt
     5641 gagggaagac tatgatgcgc aaaatgctgc tggcggcagc actttcagtg acggcaatga
     5701 ccgctcacgc cgactaccag tgcagcgtca cgccgcgtga cgatgtgatt gtcagcccgc
     5761 aaaccgtgca ggtgaagggc gaaaacggca atctggtgat cacgccagac ggcaacgtga
     5821 tgtataacgg taagcaatat tccctgaatg ccgcccagcg cgagcaggcg aaggattatc
     5881 aggctgaact acgcagcacg ctgccgtgga ttgatgaagg cgcgaaaagc cgcgtcgaaa
     5941 aagcccgtat tgcgctggat aaaattatcg ttcaggagat gggcgaaagc agcaaaatgc
     6001 gcagccgtct gaccaaactt gatgcgcaac tgaaagagca gatgaaccgc attatcgaaa
     6061 cgcgcagcga tggcctgacg tttcactata aagccattga tcaggttcgc gccgaaggcc
     6121 agcaattagt gaatcaggca atgggtggaa ttttacagga cagcattaat gaaatgggcg
     6181 cgaaagcggt gctgaaaagc ggcggtaacc cattacagaa tgtgctggga agcctggggg
     6241 ggctgcaatc ctcaatccaa accgagtgga aaaagcagga aaaagatttc cagcagtttg
     6301 gcaaagatgt ttgtagccgc gttgtgactc tggaagatag ccgcaaagcc ctggtcggga
     6361 atttaaaata atcctctatt ttaagacggc ataatacttt tttatgccgt ttaattcttc
     6421 gttttgttac ctgcctctaa ctttgtagag ctccaaaata tattcacgtt gtaaattgtt
     6481 taacgtcaaa tttcccatac agagctaagg gataatgcgt agcgttcacg taactggagg
     6541 aatgaaatgg agtttttcaa aaagacggca cttgccgcac tggttatggg ttttagtggt
     6601 gcagcattgg cattacccaa tatcaccatt ttagcaaccg gcgggaccat tgccggtggt
     6661 ggtgactccg caaccaaatc taactacaca gcgggtaaag ttggcgtaga aaatctggtt
     6721 aatgcggtgc cgcaactaaa agacattgcg aacgttaaag gcgagcaggt agtgaatatc
     6781 ggctcccagg acatgaacga taatgtctgg ctgacactgg cgaaaaaaat taacaccgac
     6841 tgcgataaaa ccgacggctt cgtcattacc cacggtaccg acacgatgga agaaaccgct
     6901 tacttcctcg acctgacggt gaaatgcgac aaaccggtgg tgatggtcgg cgcaatgcgc
     6961 ccgtccacgt ccatgagcgc agacggtcca ttcaacctgt ataacgcggt agtgaccgca
     7021 gctgataaag catccgctaa tcgtggcgtg ctggtggtga tgaacgacac cgtactggac
     7081 ggtcgcgatg taaccaaaac caacaccacc gacgtagcga ccttcaagtc tgttaactac
     7141 ggtcctctgg gatacattca caacggtaag attgactacc aacgtacccc ggcacgtaag
     7201 cacaccagcg atacgccatt cgatgtctct aagctgaatg agctgccgaa agtcggcatc
     7261 gtttataact acgctaacgc atccgatctt ccggctaaag cactggtaga tgcgggctat
     7321 gatggcatcg ttagcgctgg tgtgggtaat ggtaacctgt ataaatccgt gttcgacacc
     7381 ctggcaaccg ccgcgaaaaa cggcactgca gtagtgcgtt cttcccgcgt accgacgggt
     7441 gctaccactc aggatgctga agtggatgat gcgaaatacg gcttcgtcgc ctctggcacg
     7501 ctgaacccgc aaaaagcgcg cgtcctgctg cagctggctc tgacgcaaac caaagatccg
     7561 cagcagatcc agcagatctt caatcagtac taatcacctc gctccggtat cgtgccgggg
     7621 ctttttcact tcagacttac gtccattgcc aattttcatt accctaatga taatcaccgg
     7681 aataaattat ttcgcgtgag gtttttcggg tgaaaaagca atggattgtt ggcacggcac
     7741 tgcttatgtt gatgactggt aatgcctggg cagatggcga accgccaact gaaaatatct
     7801 taaaagatca attcaaaaag cagtatcacg gcattctcaa gcttgatgct atcaccttaa
     7861 aaaatcttga tgctaagggt aatcaggcca cctggtcagc ggaaggcgat gtctcttcca
     7921 gtgacgatct ctatacctgg gtcggtcagt tggcagatta cgaactgctc gaacagacct
     7981 ggacgaaaga taaaccggta aaattctcgg cgatgttaac cagtaaagga acgcccgcgt
     8041 ctggctggtc ggtgaacttt tactcttttc agtcggcagc cagcgatcgt gggcgggtgg
     8101 tcgacgatat caaaacgaat aataaatatc tgatcgtgaa tagcgaagat ttcaattatc
     8161 gctttagtca gcttgaatct gcgttgaata cccagaagaa ctcgattcct gcgctggaaa
     8221 aggaagtgaa agcgcttgat aagcaaatgg tggcggcgca gaaagcagcg gatgcatatt
     8281 ggggaaaaga tgcaaacggt aagcaaatga cccgcgaaga agcctttaaa aaaattcacc
     8341 aacagcgtga tgagtttaat aaacagaacg atagcgaggc gttcgcggtt aaatatgaca
     8401 aagaggttta tcaaccggcg attgcggcat gtcataaaca gagtgaagag tgttatgaag
     8461 tgccgattca gcagaaacga gatttcgata tcaacgaaca acggcgacag acttttctgc
     8521 aatcacaaaa actcagccgt aaattgcagg atgactgggt aacgctcgaa aaagggcaat
     8581 atccgttaac gatgaaagtt tcagaaataa acagtaaaaa agtcgcgatt ttgatgaaaa
     8641 ttgacgatat caaccaagct aatgaacgct ggaaaaaaga taccgaacaa ctgcggcgca
     8701 atggggtgat taagtaagtt tgatatagtg cacgatttgt agcaggatgc ggcgttgacc
     8761 ccgcatccgg caatcaacgt ctgatgcgac gcttgcgcgt cttatcagac ctacaaccgt
     8821 tgccacatgt aggctggata aggcgttcac gccgcatccg gcaatacaag tttactcagc
     8881 cagaaaaagc tccagcagcg aatttaaaaa cagcttccca tgttccgtta tctgccagta
     8941 atccgcacat tctgtgagat aaccctgggc aatcgcctcg tctaactgtg ggcgaatcac
     9001 atcttcgcaa agcccggtat acgcactaaa ctctgcgcgt ggcgcggcct ccagcaagcg
     9061 aaagcggttc ataaagaact caaacggctt atctgcggct tcgacatcac gctggctttc
     9121 cagatacctt ccttgcataa aaccacgagg atgacgcgtt ttagtggtac gcagaatgcg
     9181 cccatccggg aaggtgactt tgccgtgcgc gccgcagcca ataccgatgt agtcaccaaa
     9241 tcgccagtag ttgagattgt gctggcactg ataaccgggt ttggcgtaag cggaagtttc
     9301 atattgctga taacccgctg cggttaataa ctgatgcccc tgttcgaaaa tatcccacag
     9361 cgcgtcatcg tccggcagca ccggtggtcg cgaaccaaac agcgtattgg gttcgatggt
     9421 cagttgatac caggaaagat gcggcggatt cagttcaatg gcctggcgta gatcgccaag
     9481 cgcctcttcc agtgattgat ccggtagtcc atgcatcaaa tcaaggttaa agctacgtaa
     9541 ccctaaaccg ctcgccagct ttgccgctcg tttcgcttct tgcgggccat gaatgcgccc
     9601 aagtcgtttc agcttttctt cgctaaaact ctgcacacca atagagatgc ggttcacacc
     9661 agcacgctga taatcgacaa agcgatcggc ttctaccgta ccagggttcg cttccatagt
     9721 aatttctgca tccgctgcca gcggcaaacg cgcacgcacg ccgtccagca gcgtttgcat
     9781 cgccgggccg gaaagcaggc tcggcgtacc accgccaata aagattgtct ttacttcacg
     9841 gccctgagcg taagccacat cattgtccag atcgcaaagc agatgctgaa cataatcgtc
     9901 gtgcggcact tctcctttca acgcgtgaga gttgaaatcg cagtacgggc atttctgcac
     9961 gcaccacggg atgtgaatgt agagactcag cggcggtaat ttaaccatta cgtaaagcgt
    10021 ccagcagcag tttcaacgcc tgaccacggt gggaaatggc gctcttttct tcgcgggtca
    10081 gttcggcggc ggttttccct tcggaaggta cgaagaagat tggatcataa ccaaagccac
    10141 cagtgcccgc tggttcgcga gtaatcacgc ccggccagct gccgtggcat accagcggag
    10201 tcggatcttc cgcgtgacgc agatatacca gcacgcagtg gaaacgtgcc tgacgttggt
    10261 cgtccggtac gtctttcagt gtttccaaca gtttttgcag attcttttga tcggtcgcgt
    10321 cttcaccgga ataacgcgcg gagtaaatac ccggcgcgcc acccagcgca tctaccgcca
    10381 gaccagagtc gtcggcaatt gccggtaaac cggtcacttt tgccgcatgg cgcgctttca
    10441 gaatcgcgtt ttcgataaag gttaggccgg tttcttcagc ggaatcaacg ccgaggtctg
    10501 tttgtgtcac gatatcaaga ccaaagtcgc taagcagcga cgccagctca cgcactttac
    10561 cggcattgcc ggttgcgagg acaacttttt gcataggata cctaattaat taacgccgcg
    10621 atttctggcg ggatttgttg cggattaatg attttaattt gtttgtggcg gccaagttcg
    10681 cctttttcaa tcaccacctg gcttttggca acccggaatt gcttaccgag aaacttcacc
    10741 agatgactgt tggcctggcc gtcaactggc ggcgcggtaa tggcgacttt aacttcgtcg
    10801 ccatgtaaac cgacaataga atcacggctg gctttcggct gaatatagag ccgtaaaacc
    10861 agaccgtcat cattaactgt tacggcattc ataacgccat ccacatcccc ggcagcagga
    10921 tgtttccggt tgcctgtaat acttctgcga cacccatatt gatgacatac agcagcagaa
    10981 cgaggatcat cggcgagaaa tcaatcccac ccattgccgg tagcaagcgg cgaatcgggc
    11041 gcagcagcgg atcggccagc tgaatcagca cgtattcaat cgggctacga ccctggctta
    11101 cccagctcat aatcgccatc accagcagga cccagaaaat cagcaagccg atggttttca
    11161 gcagaatcag taaaccggca atccagatga ttggcaggaa ggtcaccact ttaaacagca
    11221 caatggcttt gataaaactg agaatatagg caaccagcag cgaggcgctg tcaatgggac
    11281 ccattgccgg aataacgcgg cgcagtggcc cgataattgg ctgcgttacc ttcactacaa
    11341 actgtgagaa ggggttgtaa aaatcacaat gagcccactg catccagatg cgtaataaca
    11401 gcaccatggt atacagctca atgaccgttg aaagcaggaa agtcaacgta ttcatggcgt
    11461 tcctttaatt ccttattttt tagagtaatc acgcgcacca aaaattgcag tgccgatacg
    11521 aaccatcgtg ctacctgccg caatggcggc ttccatatcg tccgacattc ccagagagag
    11581 cgtgtcgata tgcgggtagc gcgttttcag tccggcaaat gctacagcca tttggcgtgc
    11641 aacttcaaac tgccttacat attctgactc aggcgcaggg attgccatca gcccgcgcag
    11701 acgtaaacgc ggtagttcag cgaccgccgc tgccagctcg tccagttctg ccagttgaat
    11761 cccggactta ctgttttcat cactaatatt aatttgaatc agtacgttaa gagggggaag
    11821 ttctgccggg cgctgatcgt tgaggcgggt agcaatgcgc aaacggtcga tggtatgaca
    11881 ccagtcgaaa tgctctgcca ccaggcggct tttattagac tgcaacgggc caataaaatg
    11941 ccattctaat cctgttacgc ccagttcctg aaagtggcga attttatcta ccccttcctg
    12001 aacgtagttt tcaccaaatt gacgctgccc ggcatcaatg gcttctgcga tggcgctcgc
    12061 aggttttgtt ttactgactg caagcagcgt aatttcttct ggagaacggc cgcaacgcgt
    12121 tgcagccgct gagattttgt cccggacctg tgccaggtta tgcgcaatat cgttcatttt
    12181 ccgaggatct tagtatgaat atggaagaaa ttgtggccct tagtgtaaag cataacgtct
    12241 cggatctaca cctgtgcagc gcctggcccg cacgatggcg cattcgcggg ctaatggaag
    12301 ctgcgccgtt tgatgcgctg gacgtcgaag agctactgcg ggagtggctg gatgacgatc
    12361 agcgggcaat attgctggaa aatggccagc tggattttgc cgtgtcgctg gcggaaaacc
    12421 agcgattgcg tggcagcgca ttcgcgcaac ggcatggcat ttcgctggcg ttacggctgt
    12481 taccttcgca ctgcccgcag ctcgaacagc ttggcgcacc aacggtattg ccggaattac
    12541 tcaagagcga gaatggcctg attctggtga cgggggcgac ggggagcggc aaatctacca
    12601 cgctggcggc gatggttggc tatctcaatc aacatgccga tgcgcatatt ctgacgctgg
    12661 aagatcctgt tgaatatatc tatgccagcc agcgatgttt gatccagcag cgggaaattg
    12721 gtttgcactg tatgacgttc gcatcgggat tgcgggccgc attgcgggaa gatcctgatg
    12781 tgattttgct cggagagctg cgtgacagcg agacaatccg tctggcactg acggcggcag
    12841 aaaccgggca tttggtgcta gcaacattac atacgcgtgg tgccgcgcag gcagttgagc
    12901 gactggtgga ttcatttccg gcgcaggaaa aagatcccgt acgtaatcaa ctggcaggta
    12961 gtttacgggc cgtgttgtca caaaagctgg aagtggataa acaggaagga cgcgtggcgc
    13021 tgtttgaatt attgattaac actcccgcgg tggggaattt gattcgcgaa gggaaaaccc
    13081 accagttacc gcatgttatt caaaccgggc agcaggtggg gatgataacg tttcagcaga
    13141 gttatcagca gcgggtgggg gaagggcgtt tgtgacgttg ccatgcccga tgcgcaagtt
    13201 tatagggcct ataaaggcaa taaatgtctg atgcgacgct aacgcgtctt atcagaccta
    13261 cagccgctgc cagatgtgtg ctggataagg cgttcacgcc gcatccggca agatggcggt
    13321 aacgactatc cgccaggctt ttagatcgcc ttaatatccc tgctcgaaat agctttcgag
    13381 aataataacc gcagaggcag agtcgacttt gcctttgttg agcgcccgat agccgccctg
    13441 ttcaaacaga ccggaacggg cttccacggt gctaagacgt tcgtcatgga gctttacttc
    13501 aacaccgaaa cgaccatgaa tacggttggc aaatttacgc gctctggcag tcaatggttg
    13561 ctcggtgccg tccatattca gcggcaaacc gacgatgatt tcgtccggct gccactcttt
    13621 cagtaaacgt tcgatgaggt tccagtccgg cgtaccgtcc tgtgctttaa ttgcaggcaa
    13681 agggcgagca gtgccggtaa tgcgttggcc gaccgctacg ccaatgcttt tggtgccgaa
    13741 gtcgaaggcg agtaaggttc cactcatcag gcgtgccctg ccacaccagg catggtgaga
    13801 atatccacac caatcagttt tgccgcctcg cgccagcggt cggcaatcgg cgttttgaac
    13861 agaatattca gatccgccga ggccgttagc cacgcgttat cgagaatttc ttgttccagt
    13921 tgaccttttt cccaggaggc atagcccaga gccaccaata cgtcagacgg ttgtttatcg
    13981 gtgccgagcg tttccagcac atcgcgggaa gtggtcatca ccgtgttgtc tgaaatgcga
    14041 atgctggaag caaaattgga gggcggagta tgcaaaataa acccgcgatc ttcagccagt
    14101 gggccgccga gcataacagg tttatccaga cggattgatt catcacgcgg ctccggcgtg
    14161 atcttcagct tttccagaat cccttcaatt ttgagatttt ccagcggctt gttgacgatg
    14221 atccccattg caccattggt attatgttcg caaatgtaga ccacggaacg acggaaaatc
    14281 ggatcctgga gagcaggcat ggcaataaga aagtgatgct gtaaattcat tgtcagaggt
    14341 tctgtttcct ggttcaaaaa agcaacagcg cccagtatgc gtggaaagaa gggcgctgtc
    14401 actcagagtc tcaacgagat ccttctcgct aaggtgggtt actgctgctg taaacgtgct
    14461 tcgatggcat ccattaacat tccggtgatc gacaccggaa actctgcttc aatctcacga
    14521 atacaggttg ggctggtgac gttaatttca gtcagacggt cgccgatgat atccagacca
    14581 acaaaaatca gccctttttc tttcagcgtc ggcccgatct gacgggcgat tttccagtca
    14641 ctttccgtca gcggccgagg ttcaccgcga ccaccggcag ccagattgcc acgggtttcg
    14701 cccccctgcg gaatacgcgc caggcagtac ggtaccggct cgccatccac caccagcacg
    14761 cgtttgtcgc catctttaat ggctggcagg taattttgcg ccatgcagta gcgagtgcca
    14821 tgctcagtca gggtttcggc aatcacgccg aggtttggat cgccttcttt cacgcggaaa
    14881 atcgacgcgc cgcccatacc gtccagcggc ttaagaatga tgtcgctgtg tttctcccag
    14941 aacgctttta gctgcgcttt attgcgcgta accagcgttt ctggcgttaa gtcagagaac
    15001 caggcggtaa acagtttctc gttacagtcg cgcaggctct gcggcttgtt aacgatcagc
    15061 gtccctttct cttcggcacg ttccagaata taggtcgcgt agataaactc ggtatcaaac
    15121 ggcgggtctt tacgcatcag gagcacatcg agatcggcca gcggcagatc ctgttcaccg
    15181 acgaacgaaa accactcttc gtagttctgc ttcacgttca gcgtgcgggt atgggcgcga
    15241 gcttcgccat tgatcagata cagatcgccc atctccatat agtgaagttc gtaaccacga
    15301 cgctgtgctt ccagcaacat agcgaaactg gaatctttct tgatgttgat gtttgcgatg
    15361 gggtccatca cgatgccgag cttgatcatt attcttctcc gttagcccaa atcgccaaat
    15421 cgtacttgta gcgcggtaat ggcggtgagc gcagttgtct ctgtacgcaa aacgcgaggt
    15481 cccaacagga tatcagtaaa ttgatagcgg gcagtcatgg caatttcatc tgccgataaa
    15541 ccgccttccg ggccaatcag caggcggacg cgttcaaccg gtaacggcaa cgtattgatg
    15601 ctgttactgg cgcgcgggtg aagattcagt ttcagtcctt catcctgctc tgcacaccag
    15661 gcttccagat ccatcgctgg acggatttcc ggcacccggt tacgaccaca ctgctcacag
    15721 gcagcaattg caatcttctg ccactgctgg agcttcttgt tcagacgttc actatccagt
    15781 ttaacgccgc agcgctcaga aaaaagtggc gtaatgaggc ttacaccgag ttcgatcgat
    15841 ttctggatcg taaattccat tttttcacca cgcgacatca cctgaccgag gtgaatatgc
    15901 agcggagatt cgcgatcgtc gatcttgcct tccagcacct tcacttccac gctttttttg
    15961 ctggcgctgg taatttcggc gtcaaagacc tggttgctac cgtcaaacaa ttgcaacgcc
    16021 tgccccggcc ccatgcgcag tacgcgcccg atatggttgg cggcatcttc gcaaagcgcg
    16081 atgtgagaat ggctggtcag tggttcagga tgataaatgc gggggatacg catagttaaa
    16141 aatccgcgtc gtctccccac gcggttgtac gcgtggggta ggggttaaca aaaagagtcc
    16201 cgctagtgta ggttagctct ttcgcgcctg gcaagcgcgt tgcacatacg ggttatgatt
    16261 gccttgcacc ttcgcgatgc gttcatcgcg ctcgcactcc cagtcggtaa ccggatacat
    16321 cttgttccat gcgttgaaca gctgcgtttg ctggcgagag agtgtcaggt tgtattggtc
    16381 gcgcatatag aagtaggtgc gcgcaatggc accgcgtgca cgcgctggtg gttcggcagc
    16441 tttttctttg aaatcgacct tcatggcgca ttgaccgtac tggccttcgc cgccattcca
    16501 ctggctgtac ataaagttgc cgcgatcgcc attcacctca ccgactgacg gctgcaggtt
    16561 atgcatatcg ctttccatct tgcgatagac cggatcttta gcgcagtttt tacgtccacc
    16621 gtcctgccag cactggcgct ggtgaccgaa ctgccaggcg ggaacgacgt gttcccactc
    16681 tacgcggctg gctcggtttt catttttgcg cacctgatag ccgcacgatt gcagatcaac
    16741 aacgcctttt ttgccctgcc agttaatttt acatccgcaa taaaacgtac cgggcgcgtc
    16801 agcgtggact tttaccgccg cggctttcgc ctgagaaaaa ctattgatac cttcggccaa
    16861 cgccgggccg gaaaatgctg cgctcagtac caccgcagca atagacaaat aacggtacat
    16921 cacttactcc gtgttaaaac gagccagcaa cgtagcgaaa gttgttttgg tatgcaatca
    16981 gccagatcag gaaagttcct gatagttcag atggttattt tgcgaccagt tgttcgccgc
    17041 agtgaacaca gcgatagacg gcttcgccac gaactacgcg attatggcgg cgtacggtaa
    17101 gctgatgctc ctggcacttg cagcggtagg ggaaggtgtt gcgacgcacg gattgcagtt
    17161 cgaactgatg cgtacgacgg gcgggaacac cctgcacgtt ttccatcatc cacttccact
    17221 ctttgccatg tggtgctacg cgcccgaaat gtttccatac cagcaaatgt gccagttcgt
    17281 gcggcaccac ttcttcaata aaggcttcac tgttttccaa cagcaaaacg ggattgaggc
    17341 ggatttcata gctttccagc caggctgttc cggcggaggt gccgcgctgg gtataagaga
    17401 gttttggctc cgggtagtta cgccccaatt tcaggttagc ctgggcgagt ttttcccgca
    17461 ggcgacgcat aacggcctgt tggatggcga tagggagacg ggatgttttc atagcggcag
    17521 aggatagagc gaagaaaaga tgactgcaag aggtggcttc ctccgcgatg ggaggaagct
    17581 tggggagatt aatcgtgagc gcctatttcg cgcagtttac gacctttcat cagattacgt
    17641 tcaatatgtt ccagcgaaac gtgtttggtt tccggtacca gccacaatgt cagcaggata
    17701 aacagtacgt tcagagccgc atacacccag aaggtgttgg cgttacccag tgtgttgagc
    17761 atggtcagga acgttgcgcc aacgatcatg ttggcaatcc agttggtggc ggtagagcag
    17821 gtgatgccaa aatcgcggcc tttcagcggc tgaatttcgg agcacagtac ccaaatcagc
    17881 ggaccggcac tcatggcaaa accgacaata aacatcagca gcatggcgat ggcgaaatac
    17941 tgcgctgacg gagagtgaat accgatatgc atcattgtac cgagtacgcc catgccagca
    18001 gccatcacca ggaagcccag cgttagcgtt ggtttacgtc cccagcggtc aacaaggccg
    18061 attgcgataa aggtggcaag tacgttggtc aggccgacaa tcactgtccc ccacatttgc
    18121 tcggtagtgt tggtataacc cgccagttcg aagattttcg gcgcgtaata catgatgacg
    18181 ttcatcccgg tgaattgctg cattacctgt aacagtacgc caaggaacac cgcgcggcgg
    18241 aagttgctat tctctttaaa cagcgcccag ccactctgtt taacctgcaa actttcacgg
    18301 atttcatcca gttcgcgttt cgcttccgcg ctggtgtcac gcaggcgtag cagcacgcgt
    18361 tcggcatcaa caaaacggcg tttggcggca aaccaacgtg ggctgtctgg caggaagaag
    18421 acaccaatca gcagcaaaat tgccgggatg ataatcacac ccagcatcca gcgccatgca
    18481 ccggtgtagc tgaaggcggt atcagaaaga taagcaccga ggatcccgat agtgatcatc
    18541 aactgataca tcgagatcat actgccacga attttttccg gcgcaatttc agagaggtac
    18601 agcggtgcgg tataagaggc cacacccacc gccagcccca gtagaacgcg ggaaagaatc
    18661 agtacttcaa cgtttggcgc agccgcagag aacagcgaac cggcaacaaa caaaattgcg
    18721 ccgatcatca ggctcttttt gcgcccgagt ttaaaggaga gccagccgct gcccaccgca
    18781 ccgactgccg caccgaacat catggagctt acgacccatt cttgcgtgtg cgaagtaatc
    18841 tggaattcat ctgcaataaa cggcagtgcg ccagcaatta caccgatatc caggccaaag
    18901 agtaatcccg ccagagcggc aaggaagcag acgaaaaacg tcattgcctt gtttgaccgc
    18961 ccctgttttt tagcgtcagg catgatgccc tccaatatgg ttatttttta ttgtgaatta
    19021 agataggtga gtacgacgta aaaagatgtg aagcaaatca catcagtgta atcgcttaca
    19081 ctaacattta tcttagttat ggtttaagtg catgaaaata attgagttat atcatcatag
    19141 attaaacgct gttatctgca attaagactt tactgaaaag aaatgtaaca actgtgaaaa
    19201 ctgaataata atatgaaaat attacaaata tttggctggt gttattggtg taatcggttt
    19261 cagtagtgat gataatttgc gataaaacgt gttgaggaag aatgatgtta ttgtgcgggc
    19321 agctttttgc cggatgcggc gtgaatgcct atccaccgcg gtgaggtaaa agaaaaaggc
    19381 cagcgcgagg ctggcctttg aaagcaggtg aagaaagatt acttcagacc ggcagcatcg
    19441 cgcagcagct gcgctttgtc ggttttttcc cacgggaaat gttcacgacc aaagtgaccg
    19501 tatgctgcgg tttctttgta gatcgggtgc agcagatcca gcatctgaat cagaccgtat
    19561 gggcgcaggt cgaagaactc acgtaccagc agagtcagtt gttcagaagg cactttctca
    19621 gtaccgaaag tttctaccat gatggaggtc ggttcagcca cgccgattgc gtaggaaacc
    19681 tgaatttcac aacgatcggc caggccagca gcaacgatgt ttttcgcgac ataacgtgct
    19741 gcgtaggctg cggaacggtc cacttttgat ggatctttac cagagaatgc tccgccaccg
    19801 tgacgtgcca tgccgccgta ggtatcaacg ataattttac gaccagtcag accgcagtca
    19861 cccatcgggc caccgataac aaaacgaccg gtcgggttga tgaagaatgt ggtggcagaa
    19921 gtcagccatt cagcgggcag aattggcttg atgatctctt ccattaccgc ttcttgcagc
    19981 gatttctggt cgatctcttc agagtgctga gtggaaagca cgacagcatc aataccaacg
    20041 attttgccgt cgtcatactg gaaagtcacc tggcttttcg cgtccgggcg cagccacggc
    20101 agagtgccgt ttttacgcac ttcagcctga cgctgtacca gacggtgtgc ataggtgata
    20161 ggtgctggca tcagcacgtc ggtttcatta gttgcgtagc caaacatcag accctggtca
    20221 cccgcgccct gttccagcgg atcggcacgg tcaacgccct ggttgatgtc aggagactgt
    20281 ttgccgatag cgctcagaac cgcacaggag ttagcgtcaa agcccatgtc ggaatgcaca
    20341 tagccaattt cgcgaacggt gttacgggtg atctcttcga tgtctaccca ggcgctggtg
    20401 gtgatttcgc cgccaactaa aaccatgccg gtttttacgt aggtttcgca agcaacgcgt
    20461 gctttcggat cctgttcgag gatcgcgtct aaaacggcat cagagatttg gtcagcaatt
    20521 ttgtcaggat gcccttcaga gacggactcg gacgtaaaaa ggtgttttgc catatttaat
    20581 atcacctaaa gagaatttgg ttagctcaaa ctgttgtgtg gattttctgt ggtagcggat
    20641 cctaccacga ctctgcaggt taaaaacact ggcagtctga gtgttaatcg gtatggatgg
    20701 attaacatct ggatggctat tttaggtcaa ttcttcaccc gatttccact tttttttgaa
    20761 tcgtgtctca ttctgttaaa aacgtggctg gaaatttttt ctgacaatgc cggcattctg
    20821 cgtatttata ttttgcaatt ttctgccatt gtggggtata aaacgcggcg cgcggcttaa
    20881 ataaaaagca cacgacgttt ctttcgtgtt gccacttcca gccgggttga aatcagagtt
    20941 ttggcttgtg ggttcgtctt aacaggcggc cgtggaggtg atacgaaata atgaaccgta
    21001 gtctgctgct taacctgtct caccgttctg gtgaagattc gttccccgca ctctgcatct
    21061 ctgctttgca tacctgccga tgttataccc atctcggcgc ttctcaggat tcaagagctg
    21121 gttacagtta ctgaggactg aacaagggcg ctcttgtaaa aacaagagtt ttctcgtggt
    21181 ttcgccgaac tgtcacactt acgttcggtt atgtgcttaa taatgttatg aaaaagaaac
    21241 cggttgcgca gttggagcgt cagcattcac tgctggaaaa tccatgtgct tatgggttgt
    21301 tatcgcagtt ccaggctgcg atagtcgtta actgttttac acttaataaa ataatttgag
    21361 gttcgctatg tctgacgaca tgtctatggg tttgccttcg tcagcgggcg aacacggtgt
    21421 actacgctcc atgcaggagg ttgcaatgag ctcccaggaa gccagcaaga tgctgcgtac
    21481 ttacaatatt gcctggtggg gcaataacta ctatgacgtt aacgagctgg gccacatcag
    21541 cgtgtgcccg gacccggacg tcccggaagc tcgcgtcgat ctcgcgcagt tagtgaaaac
    21601 tcgtgaagca cagggtcagc gtctgcctgc actgttctgt ttcccacaga tcctgcagca
    21661 ccgtttgcgt tccattaacg ccgcgttcaa acgtgcgagg gaatcctacg gctataacgg
    21721 cgattacttc cttgtttatc cgatcaaagt taaccagcac cgccgcgtga ttgagtccct
    21781 gattcattcg ggcgaaccgc tgggtctgga agccggttcc aaagccgagt tgatggcagt
    21841 gctggcacat gctggcatga cccgtagcgt catcgtctgc aacggttata aagaccgcga
    21901 atatatccgc ctggcattaa ttggcgagaa gatggggcac aaggtctatc tggtcattga
    21961 gaagatgtca gaaatcgcca ttgtgctgga tgaagcagaa cgtctgaatg tcgttcctcg
    22021 tctgggcgtg cgtgcacgtc tggcttcgca gggctcgggt aaatggcagt cttccggcgg
    22081 ggaaaaatcg aagttcggcc tggctgcgac tcaggtactg caactggttg aaacgctgcg
    22141 tgaagctggg cgtctcgaca gcctgcaact actgcacttc cacctcggtt cgcagatggc
    22201 gaatattcgc gatatcgcca cgggcgttcg tgaatccgcg cgtttctatg tggaactgca
    22261 caagctgggc gtcaatattc agtgcttcga cgtcggcggc ggtctgggcg tggactatga
    22321 aggcacccgt tcgcagtctg actgctccgt aaactacggc ctcaatgaat atgccaacaa
    22381 catcatctgg gcgattggtg atgcgtgtga agaaaacggt ctgccgcatc cgacggtaat
    22441 caccgaatcg ggtcgtgcgg tgactgcgca tcacaccgtg ctggtgtcta atatcatcgg
    22501 cgtggaacgt aacgaataca cggtgccgac cgcgcctgca gaagatgcgc cgcgcgcgct
    22561 gcaaagcatg tgggaaacct ggcaggagat gcacgaaccg ggaactcgcc gttctctgcg
    22621 tgaatggtta cacgacagtc agatggatct gcacgacatt catatcggct actcttccgg
    22681 cacctttagc ctgcaagaac gtgcatgggc agaacaactc tatctgagca tgtgccatga
    22741 agtgcagaag caactggatc cgcaaaaccg tgcgcatcgt ccgataatcg acgaactgca
    22801 ggaacgtatg gcggacaaaa tgtacgtcaa tttctcgctg ttccagtcaa tgccggacgc
    22861 atgggggatc gaccagttgt tcccggttct gccgctggaa gggctggatc aagtgccgga
    22921 acgtcgcgct gtgctgctgg atattacctg tgactctgac ggtgctatcg accactatat
    22981 tgatggtgat ggtattgcca cgacaatgcc aatgccggag tacgatccag agaatccgcc
    23041 gatgctcggt ttctttatgg tcggcgcata tcaggagatc ctcggcaaca tgcacaacct
    23101 gttcggtgat accgaagcgg ttgacgtgtt cgtcttccct gacggtagtg tagaagtgga
    23161 actgtctgac gaaggcgata ccgttgcgga tatgctgcaa tatgtgcagc tcgatccgaa
    23221 aacgctgtta actcagttcc gcgatcaagt gaagaaaacc gatcttgatg ctgaactgca
    23281 acaacagttc cttgaagagt tcgaggcagg tttgtacggt tatacttatc tggaagatga
    23341 gtaagtccgt attacttgaa tccgcttaat ttagcggtga taatccgcca caatttattg
    23401 tgacaaatcc aacccttcct cgtcgggcct aacgacgcgg aagggttttt ttatatcgac
    23461 tttgtaatag gagtccatcc atgagcacct taggtcatca atacgataac tcactggttt
    23521 ccaacgcctt tggtttttta cgcctgccga tgaacttcca gccgtatgac agcgatgctg
    23581 actgggtgat tactggtgtg ccgttcgata tggccacttc tggtcgtgcg gggggacgcc
    23641 acggtccggc agcgatccgt caggtttcga cgaatcttgc ctgggaacac aatcgcttcc
    23701 cgtggaattt cgacatgcgt gagcgcctga acgtcgtgga ctgcggcgat ctggtatatg
    23761 cctttggcga tgcccgtgag atgagcgaaa aactgcaggc acacgccgag aagctgctgg
    23821 ctgccggtaa gcgtatgctc tctttcggtg gtgaccactt tgttacgctg ccgctgctgc
    23881 gtgctcatgc gaagcatttc ggcaaaatgg cgctggtaca ctttgacgcc cacaccgata
    23941 cctacgcgaa cggttgtgaa tttgaccacg gcaccatgtt ctataccgcg ccgaaagaag
    24001 gtctgatcga cccgaatcat tccgtgcaga ttggtattcg taccgagttt gataaagaca
    24061 acggttttac cgtgctggac gcctgccagg tgaacgatcg cagcgtggat gacgttatcg
    24121 cccaagtgaa acagattgtg ggtgatatgc cggtttacct gacctttgat atcgactgcc
    24181 tagatcctgc tttcgcgccg ggaaccggta cgccagtgat tggcggcctg acctccgatc
    24241 gcgccattaa actggtacgc ggcctgaaag atctcaacat tgttgggatg gacgtagtgg
    24301 aagtggctcc ggcatacgat cagtcggaaa tcaccgctct ggctgcggcg acgctggcgc
    24361 tggagatgct gtatattcag gcggcgaaaa agggcgagta agcaccagat gcgatgcgca
    24421 cgggtaaaac gtgccattaa tgtcggatgc ggcgtgaacg ccttatccga cctacgttcg
    24481 gcacccgtag gccggataag atgcgccagc atcgcatccg gcaatgcgca caaggtaaca
    24541 aatgtgccat taatgtcaga tgcggcgtga acgccttatc tgacctacgt tcgacaccac
    24601 caggctttac ttaatcccat ccgcgctcat gcgatcgcga atatgctggg cgcgttcggc
    24661 ggatgccgga tggtcgtcaa acattgagct ttggcggcct tcttccagtt tcgccagttt
    24721 ttcaaagctg gtggcaagac ctgccgggct gatgccgcgt tggcgcagaa gatcgtaaga
    24781 ataatcatcg gcttctgctt cctggcgctg ggagaattgc gaattgacta atttctcgcc
    24841 cagatcacca agttgtgatt gagataaact gccgacaatc ccgcccgcag aggccgcagc
    24901 tactcgcacg gcatttgtac caagcgccac ctgcatccct ttcttcacat ggcctaacgc
    24961 cacgtgcccc atctcgtgac cgatcaccgc ttcgacttcg ttatccgtca tcatatccat
    25021 cagcccgcta tagacgcgga tacagccgtt agccattgca aaggcgttca catccttcgc
    25081 catatacact ttgtaattca ccggctgacc gttgatattg ttgcctagcg cattggcaat
    25141 agttgtcaga cgtttagcgt attcgctatt ggctggcgca atcgtcgcct tgctgtccat
    25201 ctcctgacat gcctgatcgc tcagggtttt cacctgcgca tcactcaaac tgtaagcctg
    25261 aaaagcttcc gctcctgatg agagcagtcc gttggagtcc atattctggc aaccagtcag
    25321 taccgttgcc acgctcattg ctaccaataa ggcgcgaatt ttcatgtttt ctcttccgca
    25381 caaggtcagg attattctaa aaatgcgccg tttgcaggtg aatcgacgct cagtctcagt
    25441 ataaggaaaa gcgcagcgga cgggcgagta gattgcgcaa catgcgagca tgatccagag
    25501 atttctgaag cggcaaaagg atgttccatg tacatgacgc gcggcttgcg gtaaattgtt
    25561 ggcaaatttt ccggcgtagc ccaaaacgcg ctgtcgtcaa gtcgttaagg gcgtgccctt
    25621 catcatccga tctggagtca aaatgtcctc acgtaaagag cttgccaatg ctattcgtgc
    25681 gctgagcatg gacgcagtac agaaagccaa atccggtcac ccgggtgccc ctatgggtat
    25741 ggctgacatt gccgaagtcc tgtggcgtga tttcctgaaa cacaacccgc agaatccgtc
    25801 ctgggctgac cgtgaccgct tcgtgctgtc caacggccac ggctccatgc tgatctacag
    25861 cctgctgcac ctcaccggtt acgatctgcc gatggaagaa ctgaaaaact tccgtcagct
    25921 gcactctaaa actccgggcc acccggaagt gggttacacc gctggtgtgg aaaccaccac
    25981 cggtccgctg ggtcagggta ttgccaacgc agtcggtatg gcgattgcag aaaaaacgct
    26041 ggcggcgcag tttaaccgtc cgggccacga cattgtcgac cactacacct acgccttcat
    26101 gggcgacggc tgcatgatgg aaggcatctc ccacgaagtt tgctctctgg cgggtacgct
    26161 gaagctgggt aaactgattg cgttctacga tgacaacggt atctctattg atggtcacgt
    26221 tgaaggctgg ttcaccgacg acaccgcaat gcgtttcgaa gcttacggct ggcacgttat
    26281 tcgcgacatc gacggtcatg acgcggcatc catcaaacgc gcagtagaag aagcgcgcgc
    26341 agtgactgac aaaccgtccc tgctgatgtg caaaaccatc atcggtttcg gttccccgaa
    26401 caaagccggt actcacgact cccacggtgc gccgctgggc gacgctgaaa ttgccctgac
    26461 ccgcgaacag ctgggctgga aatatgcacc gttcgaaatc ccgtctgaaa tctatgctca
    26521 gtgggatgcg aaagaagcag gccaggcgaa agaatccgca tggaacgaga aattcgctgc
    26581 ttacgcgaaa gcttatccgc aggaagccgc tgaatttacc cgccgtatga aaggcgaaat
    26641 gccgtctgac ttcgacgcga aagcaaaaga gttcattgct aaactgcagg ctaacccggc
    26701 gaaaatcgcc agccgtaaag cgtctcagaa tgctatcgaa gctttcggtc cgctgttgcc
    26761 ggaattcctc ggcggttctg ctgacctggc accgtctaac ctgaccctgt ggtctggttc
    26821 taaagcaatc aacgaagatg ctgcgggtaa ctacatccac tacggtgttc gcgagttcgg
    26881 tatgaccgcg attgctaacg gtatctccct gcacggtggt ttcctgccgt acacctccac
    26941 cttcctgatg ttcgtggaat acgcacgtaa cgccgtacgt atggctgcgc tgatgaaaca
    27001 gcgtcaggtg atggtttaca cccacgactc catcggtctg ggcgaagatg gcccgactca
    27061 ccagccggta gagcaggtcg cttctctgcg cgtaaccccg aacatgtcta catggcgtcc
    27121 gtgtgaccag gttgaatccg cggtcgcgtg gaaatacggt gttgagcgtc aggacggccc
    27181 gaccgcactg atcctctccc gtcagaacct ggcgcagcag gaacgaactg aagagcaact
    27241 ggcaaacatc gcgcgcggtg gttatgtgct gaaagactgc gccggtcagc cggaactgat
    27301 tttcatcgct accggttcag aagttgaact ggctgttgct gcctacgaaa aactgactgc
    27361 cgaaggcgtg aaagcgcgcg tggtgtccat gccgtctacc gacgcatttg acaagcagga
    27421 tgctgcttac cgtgaatccg tactgccgaa agcggttact gcacgcgttg cggtagaagc
    27481 gggtattgct gactactggt acaagtatgt tggcctgaat ggcgctatca tcggtatgac
    27541 caccttcggt gagtcagctc cggcagagtt gctattcgaa gagttcggct tcaccgtcga
    27601 caacgtcgtt gcgaaagcaa aagaactgct gtaattagca tttcgggtaa aaaggtcgct
    27661 tcggcgacct tttttattac cttgatatgt ccgtttgcgg acaagcaata gataaagcgt
    27721 gttgcagatc acaaatattt atatgcaata aatatcaatt atgtaatatg catcacgata
    27781 tgcgtattga catttgttgt tatatctata actcaatgtt atataagaaa ttaataattc
    27841 actgttttca aaacaccggt ttccctgctc aattgctttc attaaaccgc acgagtattt
    27901 tatttttacc gccggacggt accctaaaaa taaaataagg ataatttatg cggcttagtg
    27961 actattttcc agaatcatca atctcagtta tacattcagc aaaagattgg caggaagcta
    28021 tcgatttctc gatggtatca ttgctggata aaaactatat cagcgagaat tacattcagg
    28081 caattaaaga ttccaccatt aacaatggcc cttattatat tctcgcacca ggcgtggcaa
    28141 tgcctcatgc gcgaccggaa tgtggggcgc ttaaaaccgg gatgtctttg acattacttg
    28201 aacaaggtgt ttattttccg gggaatgacg aaccaattaa attactcatc ggactctctg
    28261 ctgccgatgc cgattcgcac attggcgcta ttcaggcgtt aagtgaatta ctgtgcgaag
    28321 aagaaatact cgaacaactc ttaacagcat catcagaaaa acaattagcg gacattatca
    28381 gccacggata attactctct cctctacagg ataatattat ggaaaacaag tctgctcgtg
    28441 caaaggtcca ggcttttggg ggctttttga ctgcaatggt catccccaat attggtgctt
    28501 ttattgcctg gggttttatt actgcgttat ttattcccac cggttggctg cctaacgaac
    28561 atttcgccaa aattgtcggc ccgatgatta cctatttatt gcccgtgatg attggttcta
    28621 caggtggtca tctggtcggc ggtaaacgcg gggcggtcat gggcggaata ggtactattg
    28681 gtgtgatcgt tggcgcagag atcccgatgt tccttggctc aatgatcatg gggccgctcg
    28741 gtgggttggt cataaaatat gtcgataagg cactggaaaa acgcatacct gccggttttg
    28801 agatggttat caataacttc tcattaggta tcgcggggat gctcctttgt ctgctgggtt
    28861 ttgaagtgat cggcccggcg gtgttaattg ccaatacttt cgtcaaagag tgtatcgagg
    28921 cgctggtaca tgcgggttat ctgcctctgc tgtcagtcat caatgaaccg gcgaaagtgc
    28981 ttttccttaa taatgcgatc gatcagggcg tctattatcc gctgggaatg caacaggctt
    29041 cggttaacgg taaatccatc ttctttatgg tggcctctaa cccaggtccg ggcctggggc
    29101 tgctgctggc gtttaccttg tttggtaaag ggatgagtaa acgttctgcg cccggggcga
    29161 tgattattca cttcctcggt gggatccacg aactgtattt cccatatgtg ctgatgaagc
    29221 cgctgactat tattgccatg attgcgggcg gtatgtctgg tacctggatg tttaacttac
    29281 tggacggtgg tctggtggct ggcccaagtc tggggtctat ctttgcttac ctggcactga
    29341 cgccgaaagg ctcgttcctg gcgacaattg ccggtgttac ggtaggtacc ctggtgtcct
    29401 ttgctattac ttcgctgata ctgaagatgg aaaaaacggt ggaaacggag agcgaagatg
    29461 agtttgctca gtcagccaat gcggttaagg cgatgaaaca agagggtgca ttctcgttaa
    29521 gcagggttaa gcgtatcgcc tttgtttgcg atacggggat gggctccagt gcgatgggcg
    29581 cgaccacctt ccgtaaacgc ctggaaaaag cggggctggc aatagaagta aaacattacg
    29641 cgatagaaaa cgtgcctgcg gatgccgata tcgtcgtcac tcacgccagt ctggaagggc
    29701 gcgtgaaacg tgtgacggat aaaccgctga tattgattaa taactatatt ggcgatccaa
    29761 aactcgacac tttatttaat caattaaccg ccgaacataa acactgatta cagaggtaaa
    29821 aatgaaaacc aaagttgctg ctatttatgg caagcgggat gtccgtctgc gcgaatttga
    29881 actgccagaa attaccgata atgaactgtt agtgagtgta atttctgaca gcgtctgttt
    29941 atcgacctgg aaagcggcgt tactcggtag tgaacataaa cgcgtacccg acgatttaga
    30001 aaatcatccg gtcattaccg ggcatgaatg tgccggggtt attgtcgaag tgggtaaaaa
    30061 tctcactggc aaatataaaa aaggccagcg ttttgtattg caaccggcga tggggttacc
    30121 aagcggatat tcagcaggct acagctacga atattttggc ggtaacgcca cctatatgat
    30181 tattcccgaa atcgccatta atttgggctg cgtattaccg tatcacggct cttattttgc
    30241 tgcggcgtcg ctggtagagc ctatgtgctg cattattggt gcttatcatg ccaattatca
    30301 caccacgcaa tatgtttatg agcatcgcat gggcgtcaaa cctggcggca atattgcact
    30361 gctggcgtgt gcgggtccga tgggcattgg cgctatcgat tacgccatta acggtggcat
    30421 acaaccgtca cgggtggtgg tggtcgatat cgacgacaaa cgcctggcgc aggtgcagaa
    30481 gctgctgccg gtggatctgg cggccagtaa aggcattgag ctggtgtatg tgaataccaa
    30541 agggatgagc gatccggtcc agacgctgcg ggcgctgaca ggagatgtcg ggttcgatga
    30601 catttttgtt tatgcggcgg tgcctgctgt cgttgagatg gctgacgaat tactggcgga
    30661 agatggctgt ctgaacttct ttgccgggcc gacggataaa aacttcaaag tgccgtttaa
    30721 tttctacaac gtccattaca acagcacgca cgtagtcggt acatccggcg gttcaacgga
    30781 cgacatgaaa gaggcgattg cgttaagcgc cacggggcag ttgcagccgt cctttatggt
    30841 cacgcatatc ggtgggctgg atgcggtgcc agataccgtg ctcaatctgc cggatatccc
    30901 tggcggtaaa aaactcattt ataacggcgt gaccatgccg ctcactgcca ttgccgattt
    30961 tgccgaaaaa ggcaaaaccg atccgctatt taaagagttg gcgcggctgg ttgaggaaac
    31021 gcacggcatc tggaatgaac aggccgagaa atatctgctg gcacaatttg gcattgatat
    31081 cggggaggcc gcgcaatgat gtccctggcg tggccattat ttcgcgttac ggaacaggca
    31141 gcgttggctg cctggccgca aaccggatgt ggcgacaaaa ataaaattga tggcctggcg
    31201 gtcaccgcga tgcgccaggc attaaacgac gtcgcttttc gtggacgagt ggttatcggc
    31261 gaaggagaaa ttgaccatgc gccgatgctg tggattggcg aagaggtggg caaaggcgat
    31321 gggccagaag tcgatatcgc ggttgatccc attgaaggca cgcggatggt ggcgatgggg
    31381 cagagcaatg cgctggcggt catggctttc gcccctcggg atagcctgtt acatgcgccc
    31441 gatatgtata tgaaaaagct ggttgttaat cgactggctg ccggggtgat tgatctgtct
    31501 ttgcctctgg cggacaactt gcgtaacgtg gcgcgggcgt taggtaaacc gctggacaag
    31561 ctgcgcatgg ttacgctgga taaaccgcgc ctgagtgccg cgattgagga agcaacacag
    31621 ctgggcgtga aggtttttgc cctgccggat ggcgatgtcg ccgccagcgt gctgacctgc
    31681 tggcaggata atccttacga tgtgatgtac accatcggcg gtgcgccaga aggcgtgatt
    31741 tctgcctgtg ccgttaaagc attaggcggg gatatgcagg ccgagctgat tgacttttgt
    31801 caggctaaag gggattacac ggaaaatcgg cagattgcag agcaggagag caagcgttgc
    31861 aaggcaatgg gcgttgacgt taaccgtgtg tactcgctcg atgaactggt aagggggaac
    31921 gatatcctct ttagcgctac gggcgtgacg ggcggcgagt tggtgaacgg tatccaacag
    31981 acggcgaatg gggtgcggac gcagacatta ctgatcggcg gcgcggacca aacgtgtaat
    32041 ataatagact ccctgcattg atggtgatct atcggaagac caatggcgaa gctgacagaa
    32101 gatgatgtgc ttgagcaact ggatgcacag gacaatttat tttcatttat gaaaactgcg
    32161 cattctattt tgctccaggg gatacgccag tttctgccgt cgctgtttgt cgataacgat
    32221 gaagagatcg tggaatatgc agtgaagccg ttactcgccc aaagcggccc gcttgacgat
    32281 attgatgttg cgctgcgttt gatttatgcg ctggggaaaa tggataaatg gctgtacgcc
    32341 gatatcacgc atttttccca gttctggcat tacctgaacg aacaggatga aacgcccgga
    32401 tttgccgatg acatgacctg ggattttatc agcaacgtca atagcataac ccgcaatgcg
    32461 atgctctatg acgcgttgaa agcgatgaag ttcgccgatt tcgccgtctg gtcagaggcg
    32521 cgttttagcg ggatggtcaa aacggcgctg acgctggcag taacgacaat cttaaaggaa
    32581 ttaacgccgt gaaaattgaa ttaacggtga atgggctgaa gatacaggca cagtaccaga
    32641 acgaagagat tgaaaatgta cataaaccgt tgctgcgtat gctggcggcc ttacagacgg
    32701 taaatccgca gcggcgtacg gtggtttttc tttgcgctcc gccggggacg ggtaaatcta
    32761 ccctaaccac cttctgggaa tatctcgcgc aacaagaccc ggagctgccc gctattcaga
    32821 cgctcccgat ggatggtttt caccattaca atagctggct ggacgcgcat caattgcgcc
    32881 ccttcaaagg cgcaccagag acatttgacg ttgcgaaact ggcggaaaat ctgcgccagg
    32941 tggtggaagg ggattgtacg tggccgcagt acgatcgaca aaagcatgat cctgttgaag
    33001 atgcgttgca cgttaccgca ccactcgtca tcgtcgaagg aaactggttg ttgctggacg
    33061 acgagaagtg gtgccagctt gcgcaatttt gtgatttctc gatctttatc aacgcgccag
    33121 ctactgcgtt gcgggagcgt ctggtggggc gcaagctggc gggaggggta tcgctggcag
    33181 atgcagaagc cttttatgac cgtaccgacg ggccgaatgt tcgccgggtg ctggaagaga
    33241 gtctgcctgc aaatttgacc ttaatgatga ccgctacggg tgaatatcgt ctggtggatt
    33301 aacgttcctg attacaccat cttccagtcg caccacacga gagaaatgac gccgggtaaa
    33361 tgcggcgtca tgactgattg ctaccacgct cgtgcctcgc tggcggcact tctccagcca
    33421 gctttcaaac acgctcaacc aattttcgtc aaaatcccga ctcggctcgt ccagcagtaa
    33481 tagtggcgga gagagtgctt ccaggcaggc gacggcgacc atccgtcgct gcgcactatg
    33541 cagatccaac gggtgcgagt tggcagtgtc tgctaactga caacattgca gggcagcatg
    33601 ggtacgttga gtgatttcat ccgccgggca tttttgcagt ttcaaaccaa atgcgatctc
    33661 gtcagcgacg gtgctgtgaa aaagttggtt ttccgcttcc tgaaacagta cgccaacctt
    33721 tgccgcgcgc tggcggtttt tcaggttttt catcgcctgt tgttgcagca taaccgtacc
    33781 ggctgtgggc gtaagaagac ctgccattac tcgtaacagc gtcgatttcc ctgcgccatt
    33841 gtcaccggtc agcgccaacc attcaccttg tttgagttgc agagaaatgt cgcaaagaca
    33901 atccgttgcc gcgccaggcc agcgataaga tatctgattt aacgttaaca tagtggctgg
    33961 agcgctccgt tttgcaattg ccacgcttgc tggcagtagt tcaggaaagg tgtgcgatga
    34021 cgttcaaaaa gaataatcag cgaaccacgt tcaaacgccc agtgttgtaa gcgctgcaac
    34081 agcatttcgc tggcctgcgg cgtcaggcgg ctaaaggctt catcaagaat taagagcttt
    34141 ggctgcatcg cgatggcgca ggcgatgacc acgcgctgtg tctctccacc ggagagtgtt
    34201 gccgggtgac gatggcgcaa cggctggcac tcggtcagag tcagggcggc atcaatccgc
    34261 gccataatct ctgcttcagc aagacacaga ttttctggcc caaaggcaac ttcttcttcc
    34321 acgctaaagg tacagccgga gagctgcaaa tagggcgatt gctggacgag ctggatggtg
    34381 gcggattgtt cattaagcgg gagatgccca atgggcgtac cgaggagcgt ccccgtgcct
    34441 gttatctctc ctggcagaaa gtccggatac cagcccgcca tcagctgtgc cagcgtactt
    34501 ttgccactgc cgttgtcacc aaagatggcg accatccccg gtttgacata gtgaaagtca
    34561 taacagaacg gaggatgcgt tgagtgtgtc gggcaataac ggaactgttc taacgtaacc
    34621 atatccacgc tccgaattct gtcagcatca gcaagatcat ggtgtaacgc gctacgcgtt
    34681 gtagggtgct atcggctggt gcccacaacg ttgttcgtcg gttgtggatc cgaaatgccc
    34741 gcatatccag cgccgcacca cggacagcca gatcgttaag cgcattgtgt gttagcggaa
    34801 taattaacgc gggcatcgca cgtaaacgct gataccagcc ctcatccagc ggcacgccgc
    34861 gggcacgctg cgcttcatga ataatcgcta attgccgttt taactgctca acgaccaata
    34921 acggcccggc aaacagataa gcgacgcctg gcggcaggcg agaagcaaac agagcgcgaa
    34981 taaaacattg cacggggacg tactgcatcc acaactgtga ggttgaaaca atcgccagaa
    35041 tccgcaacca gagcgtaata gcatgcgacc accgttctgg cgagcgtggc gtgccgctta
    35101 gccattctgg tagccagcca ccgtgtacca gccacagccc ggctcccagc gagaacatca
    35161 gccagacgac atattttgcc cgccgccgcg tggcctttag cgcaataagg cagaaaaagg
    35221 tcgccgcgct atagatcggc aaaatggtct gcgcgggcag gataagcgtg gtgcaggccg
    35281 ccaatgccca cagtattaat gaggtaaatg gatgcattta gcgcacggca gccattgccg
    35341 gaaaatggcg cgtggtgcga atcggcagct ggcgcagtaa aagccagaca atcaccgctg
    35401 taagaatttt atcgaccagg ttcgcgccta tcaccgtaat cgccaccgac tccaccaggt
    35461 tttgccccat cgagtgcatc caggcaacga acaaatcggc tccgctaccg gtgacaccgc
    35521 cgaacagcgc agtacgcagc ggtacagcga cgaccgttac cgcaagcgta ataatcacgc
    35581 cgctgacaac gacttttggc agggtgcgaa accaacccgc tcgcgccagc caaccggcga
    35641 ccaggccgat gaccatcgcg acgggtgcaa atgcggcggc gatcgggtcg gtcagcaatc
    35701 cccagagtaa attggtcagt aagccggtca gcattccgat caccggacca agcagtaccg
    35761 cgctaataag tgtgccgatg gagtcgagaa atataggtaa tttgaccatg ctggccagtt
    35821 gcccgccgat catattgatg gcgatagata taacgatcaa caccagtgcc tgactggaaa
    35881 agtggctacg cgccataaga aaacctcttt gaaagtagtt atttaacggg ggaaatatgc
    35941 aactcgtcgt aaccagaaag cgcgcaaggt tggcggctaa acgccagttc ctcaaggcta
    36001 ccgatcacca gttcaagcgt ggtccgcacg gtacagccgg gcatcatatg accgccaagc
    36061 atcgtgccgt gtggatcgga aacgcagaga tgaagatgct caccactctg ttccagcgtg
    36121 ccgtttagtg agatcacttc gaatgtaccg ttcaggagcg tggtgccttc ttgcctggca
    36181 tagcgcaagg cgacgtcagt caggctaccg gtacagcctg caatccaggc ggcatgaagt
    36241 tgatgctgct gtgcaaaagc gtgtagctgg gaaaaaactt cctgcccggg gaggaggcgc
    36301 agtgcgtaaa agcgtgcgga ggaagaatat gggtagggca atgtcatcat tggagtactc
    36361 cgaaactcgg acgtattgcg gataatatcg acgctgcatc agtcatattc tgatataagt
    36421 cagggtttgt gacggcacaa cgaaaagatt ttgctacgct tattcgtgat tctgcaaagt
    36481 ggaataaatt ctacaggggc ggggctgaaa acgtgacgta agtcagataa ttgctttctt
    36541 tgactggaca atcattcctt ttattccacg tttcgcttat cctagctgaa gcgtttcagt
    36601 cgattaaatg ttcgacaatt aaccaatcag tcgcagtttg cgacaggtaa ggtttccccg
    36661 gacgatttgc tggattactc tgtctggcaa atttgctcag ggaaaacctt gcaggagatc
    36721 tatgaccgta cgcgtagcga taaatggctt cggtcgcatc gggcgtaatg tggttcgtgc
    36781 tttgtatgaa tccggacgcc gggcggaaat taccgtggtg gcaatcaacg aactggcgga
    36841 tgctgcgggc atggcgcatt tgttgaaata tgacaccagc catggccgtt ttgcatggga
    36901 agtacgacag gaacgcgatc aactttttgt tggtgatgac gccatccgcg tattgcatga
    36961 acgttcactg caatcgctcc cctggcgtga acttggcgtt gatgtagtcc tcgactgcac
    37021 cggcgtatat ggctcccgcg agcatggcga agcgcatatt gccgccgggg ccaaaaaagt
    37081 gctcttttca catcctggca gtaacgatct cgacgcgacc gttgtttacg gcgtcaatca
    37141 ggatcaactt cgtgcggaac accgcatcgt ttctaacgct tcctgtacca cgaattgcat
    37201 aattcccgtc atcaaattgt tagatgatgc gtacggtatt gagtccggca ctgtgaccac
    37261 aattcactcc gccatgcacg atcaacaggt tattgatgca taccatcctg acctgcgtcg
    37321 cacccgggca gccagccagt cgatcattcc ggtcgatact aaactggccg ccggtatcac
    37381 acgatttttt ccgcaattta acgatcgctt tgaagcgatt gcggtacgtg tgccaaccat
    37441 aaatgtgacg gcaatcgatt taagcgtgac ggtgaagaaa cctgtaaaag ccaatgaagt
    37501 caacctgttg ctgcaaaaag cagcacaagg tgcatttcat ggtatagttg actatacgga
    37561 attgccgttg gtctctgtag attttaacca cgatccgcac agtgccattg tcgatggcac
    37621 ccaaacccgg gtcagtggcg cacacctgat caaaacgttg gtctggtgcg ataacgaatg
    37681 gggctttgct aaccgaatgc tcgacacgac gttagctatg gctactgttg ctttcaggta
    37741 agacgcaagc agcgtctgca aaacttttag aatcaacgag aggattcacc atgtctgtaa
    37801 ttaagatgac cgatctggat cttgctggga aacgtgtatt tatccgtgcg gatctgaacg
    37861 taccagtaaa agacgggaaa gtaaccagcg acgcgcgtat ccgtgcttct ctgccgacca
    37921 tcgaactggc cctgaaacaa ggcgcaaaag tgatggtaac ttcccacctg ggtcgtccta
    37981 ccgaaggcga gtacaacgaa gaattctctc tgctgccggt tgttaactac ctgaaagaca
    38041 aactgtctaa cccggttcgt ctggttaaag attacctcga cggcgttgac gttgctgaag
    38101 gtgaactggt tgttctggaa aacgttcgct tcaacaaagg cgagaagaaa gacgacgaaa
    38161 ccctgtccaa aaaatacgct gcactgtgtg acgtgttcgt aatggacgca ttcggtactg
    38221 ctcaccgcgc gcaggcttct actcacggta tcggtaaatt cgctgacgtt gcgtgcgcag
    38281 gcccgctgct ggcagctgaa ctggacgcgc tgggtaaagc actgaaagaa cctgctcgcc
    38341 cgatggtggc tatcgttggt ggttctaaag tatctaccaa actgaccgtt ttggactccc
    38401 tgtctaaaat cgctgaccag ctgattgttg gtggtggtat cgctaacacc tttatcgcgg
    38461 cacaaggcca cgatgtgggt aaatccctgt acgaagctga cctggttgac gaagctaaac
    38521 gtctgctgac cacctgcaac atcccggttc cgtctgatgt tcgcgtagca accgagttct
    38581 ctgaaactgc accggctacc ctgaaatctg ttaacgatgt gaaagctgac gagcagatcc
    38641 tggatatcgg tgatgcttcc gctcaggaac tggctgaaat cctgaagaat gcgaaaacca
    38701 ttctgtggaa cggtccggtt ggcgtgttcg aattcccgaa cttccgcaaa ggtactgaaa
    38761 tcgtggctaa cgctatcgca gacagcgaag cgttctccat cgctggcggc ggcgacactc
    38821 tggcagcaat cgacctgttc ggcattgctg acaaaatctc ctacatctcc actggcggcg
    38881 gcgcattcct cgaattcgtg gaaggtaaag tactgcctgc agtagcgatg ctcgaagagc
    38941 gcgctaagaa gtaaaaaatc acagggcagg gaaacctgcc cttgtttcag cgcgctttta
    39001 gagcacgcat tttttcatac tctaaataat tcgagttgca ggaaggcgac aagagagtga
    39061 atccccagga gcttacataa gtaagtgact ggggtgagcg aacgcagacg cagcacatgc
    39121 aacttgaagt atgatgagta taaggcccga cgatacagga caagagacat gtctaagatt
    39181 tttgatttcg taaaacctgg cgtaatcact ggtgatgacg tacagaaagt tttccaggta
    39241 gcaaaagaaa acaacttcgc actgccagca gtaaactgcg tcggtactga ctccatcaac
    39301 gccgtactgg aaactgctgc taaagttaaa gcgccggtta tcgttcagtt ctccaacggt
    39361 ggtgcttcct ttatcgctgg taaaggcgtg aaatctgacg ttccgcaggg tgctgctatc
    39421 ctgggcgcga tctctggtgc gcatcacgtt caccagatgg ctgaacatta tggtgttccg
    39481 gttatcctgc acactgacca ctgcgcgaag aaactgctgc cgtggatcga cggtctgctg
    39541 gacgcgggtg aaaaacactt cgcagctacc ggtaagccgc tgttctcttc tcacatgatc
    39601 gacctgtctg aagaatctct gcaagagaac atcgaaatct gctctaaata cctggagcgt
    39661 atgtccaaaa tcggcatgac tctggaaatc gaactgggtt gcaccggtgg tgaagaagac
    39721 ggcgtggaca acagccacat ggacgcttct gcactgtaca cccagccgga agacgttgat
    39781 tacgcataca ccgagctgag caaaatcagc ccgcgtttca ccatcgctgc gtccttcggt
    39841 aacgtacacg gtgtttacaa gccgggtaac gtggttctga ctccgaccat cctgcgtgat
    39901 tctcaggaat atgtttctaa gaaacacaac ctgccgcaca acagcctgag cttcgtattc
    39961 cacggtggtt ccggttctac tgctcaggaa atcaaagact ccgtaagcta cggcgtagtg
    40021 aaaatgaaca tcgataccga tacccaatgg gcaacctggg aaggcgttct gaactactac
    40081 aaagcgaacg aagcttatct gcagggtcag ctgggtaacc cgaaaggcga agatcagccg
    40141 aacaagaaat actacgatcc gcgcgtatgg ctgcgtgccg gtcagacttc gatgatcgct
    40201 cgtctggaaa aagcattcca ggaactgaac gcgatcgacg ttctgtaaga tattcctttc
    40261 tgcttatctc aaggcccgct ctgcgggtct ttttttcgcc aaaagcaaaa ttgcctgatg
    40321 cgctacgctt atcaggccta cacgtatcct gcaatatatt gaatttgcag gtttttgtag
    40381 gccggataag gcgttcacgc cgcatccggc atgacaaagc gcacattgat atctgtctga
    40441 gccccgctct gcggggattt tttcgccaaa agcaaggtga ttcagatgag aaatctgtga
    40501 cctatttggc aaaattatgc tttattgttt acccttgtca gactgcccgt cataaggcgg
    40561 cggagtgtat ttctccattt tgagtcagtt gaaaaggaat attgaatgga agatttgaat
    40621 gttgtcgata gcataaacgg cgcgggaagc tggctggtag ctaaccaggc gctgctgcta
    40681 agttatgcag taaacatcgt ggcggcactc gcgatcatca tcgttggttt gattatcgcg
    40741 cggatgattt ccaacgcggt gaatcgcctg atgatctccc gtaaaatcga tgccactgtt
    40801 gctgattttc tttctgcatt agtccgttac ggtattatcg cctttacgct aatcgctgcc
    40861 ctgggacgcg tgggtgtaca aacagcgtca gtcattgctg tactcggtgc cgcaggctta
    40921 gctgttggtc tggctttgca ggggtcactt tctaacctgg ccgctggcgt gttacttgtc
    40981 atgttccgac cgttccgtgc cggagaatat gttgacctcg gcggcgtagc cggtactgtg
    41041 ctgagtgtgc agattttctc caccaccatg cgtactgcag acggtaaaat tatcgttatt
    41101 ccgaacggta aaattattgc cggaaatatt attaacttct cccgcgagcc agttcgccgt
    41161 aacgaattta ttattggcgt ggcgtatgat tccgatatcg atcaggttaa gcagatcctg
    41221 accaatatta tccagtctga agatcgcatt ttgaaagatc gcgaaatgac tgtgcgcctg
    41281 aacgaacttg gtgcatcgtc gattaatttc gtggtccgcg tctggagcaa cagcggcgat
    41341 ctgcaaaacg tgtactggga tgtgctggag cgtattaaac gtgaatttga tgccgccggt
    41401 atcagcttcc cgtacccgca aatggatgtg aactttaagc gggtgaaaga agacaaagct
    41461 gcgtaatcaa cgctgaggcc agataatact ctctggcctc tctcttatta gttattctga
    41521 ttgccaatta atattatcaa tttccgctaa taacaatccc gcgatatagt ctctgcatca
    41581 gatacttaat tcggaatatc caacgtgttt tcttattact ttcaaggtct tgatcttggg
    41641 gc
//
LOCUS       DADMIB010000013        40625 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.013, whole genome shotgun sequence.
ACCESSION   DADMIB010000013 DADMIB010000000
VERSION     DADMIB010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40625
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.013"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(265..1122)
                     /gene="murI"
                     /locus_tag="JNZ89_000738"
     CDS             complement(265..1122)
                     /gene="murI"
                     /locus_tag="JNZ89_000738"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HAY8934695.1"
                     /translation="MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLL
                     PDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA
                     LREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEML
                     GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVL
                     PEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFE
                     TLEKLAVLG"
     gene            complement(1067..2915)
                     /gene="btuB"
                     /locus_tag="JNZ89_000739"
                     /pseudo
     CDS             complement(1067..2915)
                     /gene="btuB"
                     /locus_tag="JNZ89_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418401.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor BtuB"
     regulatory      complement(2969..3159)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3273..4373
                     /gene="trmA"
                     /locus_tag="JNZ89_000740"
     CDS             3273..4373
                     /gene="trmA"
                     /locus_tag="JNZ89_000740"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HAY8934696.1"
                     /translation="MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHY
                     RMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLR
                     HKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTK
                     IELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELY
                     CGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
                     VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPCILYISCNPETLCKNLE
                     TLSQTHKVERLALFDQFPYTHHMECGVLLTAK"
     gene            complement(4413..4772)
                     /locus_tag="JNZ89_000741"
     CDS             complement(4413..4772)
                     /locus_tag="JNZ89_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YijD family membrane protein"
                     /protein_id="HAY8934697.1"
                     /translation="MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLV
                     LTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIM
                     VFWIGAKMRNRKQEVAE"
     gene            complement(4772..5422)
                     /gene="fabR"
                     /locus_tag="JNZ89_000742"
     CDS             complement(4772..5422)
                     /gene="fabR"
                     /locus_tag="JNZ89_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HAY8934698.1"
                     /translation="MMGIRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGI
                     APTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN
                     NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVT
                     IVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE"
     gene            5743..7143
                     /gene="sthA"
                     /locus_tag="JNZ89_000743"
     CDS             5743..7143
                     /gene="sthA"
                     /locus_tag="JNZ89_000743"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418397.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HAY8934699.1"
                     /translation="MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGG
                     CTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQ
                     GFYERNHCEILQGNARFVDEHTLVLDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTH
                     PRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQE
                     MSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTD
                     SLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALV
                     KGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMN
                     VGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTM
                     AEAYRVAALNGLNRLF"
     gene            complement(7126..8043)
                     /gene="oxyR"
                     /locus_tag="JNZ89_000744"
     CDS             complement(7126..8043)
                     /gene="oxyR"
                     /locus_tag="JNZ89_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HAY8934700.1"
                     /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
                     VMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVG
                     PYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPL
                     FDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
                     FRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGS
                     PLRSRYEQLAEAIRARMDGHFDKVLKQAV"
     gene            complement(8310..9683)
                     /gene="argH"
                     /locus_tag="JNZ89_000745"
     CDS             complement(8310..9683)
                     /gene="argH"
                     /locus_tag="JNZ89_000745"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HAY8934701.1"
                     /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
                     VTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKK
                     LHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRA
                     QPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
                     ASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSG
                     SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDAFDT
                     WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VEAIRQGKPLEDLPLDELQKFSHVIGEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIA
                     FAQARLG"
     gene            complement(9744..10520)
                     /gene="argB"
                     /locus_tag="JNZ89_000746"
     CDS             complement(9744..10520)
                     /gene="argB"
                     /locus_tag="JNZ89_000746"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HAY8934702.1"
                     /translation="MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGG
                     GCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGL
                     FLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN
                     ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKV
                     NAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA"
     gene            complement(10528..11532)
                     /gene="argC"
                     /locus_tag="JNZ89_000747"
     CDS             complement(10528..11532)
                     /gene="argC"
                     /locus_tag="JNZ89_000747"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HAY8934703.1"
                     /translation="MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL
                     ISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDL
                     SGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ
                     LALKPLIDADLLDLNQWPAINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
                     ATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKG
                     VPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI
                     "
     gene            11686..12837
                     /gene="argE"
                     /locus_tag="JNZ89_000748"
     CDS             11686..12837
                     /gene="argE"
                     /locus_tag="JNZ89_000748"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HAY8934704.1"
                     /translation="MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFK
                     DLGFNVEVQPVPGTRNKFNMLASIGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHD
                     GKLYGLGTADMKGFFAFILDALRDIDVTKLKKPLYILATADEETSMAGARYFAETTAL
                     RPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQ
                     LRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNG
                     LLNDALAPVIERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEA
                     PFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELIIQVIHHFCWH"
     gene            13189..15840
                     /gene="ppc"
                     /locus_tag="JNZ89_000749"
     CDS             13189..15840
                     /gene="ppc"
                     /locus_tag="JNZ89_000749"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HAY8934705.1"
                     /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKS
                     SRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
                     VIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQ
                     LDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVP
                     NYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT
                     DLFLKDIQVLVSELSMVEAPPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARL
                     KGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVR
                     IDIRQESTRHTEALGELTRYLGIGDYKSWSEADKQAFLIRELNSKRPLLPRNWQPSAE
                     TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
                     DDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIK
                     TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP
                     EITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYL
                     RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK
                     VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKEL
                     RNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKE
                     GQEPDPRVEQALMVTIAGIAAGMRNTG"
     gene            16023..17756
                     /gene="cptA"
                     /locus_tag="JNZ89_000750"
     CDS             16023..17756
                     /gene="cptA"
                     /locus_tag="JNZ89_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709755.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase CptA"
                     /protein_id="HAY8934706.1"
                     /translation="MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTN
                     GIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLF
                     VMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALL
                     YGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNE
                     NNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLT
                     VFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMT
                     ARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQDVLNDPAPKKLIIVHLLGT
                     HIKYKYRYPENQGKFDGNTDHVPPGLSAEELESYNDYDNANLYNDHVVASLIKDFKAA
                     DPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFS
                     QDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYD
                     TLPYGDQVGNQ"
     gene            17971..18822
                     /locus_tag="JNZ89_000751"
     CDS             17971..18822
                     /locus_tag="JNZ89_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8934707.1"
                     /translation="MYHDISYLLSRLINGPLSLRQIYFASSNGPVPDLAYQVDFPRLE
                     IVLEGEFVDTGAGATLVPGDVLYVAAGGWNFPQWKTPATTFSVLFGKQQLGFSVVQWD
                     GKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ
                     IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL
                     NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT
                     EKPTTPE"
     gene            complement(18809..19150)
                     /locus_tag="JNZ89_000752"
     CDS             complement(18809..19150)
                     /locus_tag="JNZ89_000752"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HAY8934708.1"
                     /translation="MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALG
                     TENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVL
                     SAPQQTHLILE"
     gene            complement(19152..20030)
                     /locus_tag="JNZ89_000753"
     CDS             complement(19152..20030)
                     /locus_tag="JNZ89_000753"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418387.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[formate-C-acetyltransferase]-activating enzyme"
                     /protein_id="HAY8934709.1"
                     /translation="MTSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFF
                     KGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDA
                     LEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS
                     KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPG
                     FTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVAT
                     MREMAERAGFQVTVGG"
     gene            complement(19996..22293)
                     /locus_tag="JNZ89_000754"
     CDS             complement(19996..22293)
                     /locus_tag="JNZ89_000754"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HAY8934710.1"
                     /translation="MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRA
                     KATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFA
                     ISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIID
                     YPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAVLAETMAANCT
                     DAQRREELLTIAEISRHNAEHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYM
                     LPFYQASLTPGEDPAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLT
                     ENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRLGTGIPQIF
                     NDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHEN
                     EGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGR
                     DITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGE
                     KVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVP
                     LGSVVGATPDGRFAGEQLADGGLSPMLGQDEQGPTAVLKSVSKLDNTLLSNGTLLNVK
                     FTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLWEAQQRPQDYAGLVVRVA
                     GYSAFFVELSKEIQDDIIRRTAHQL"
     gene            complement(22344..22664)
                     /locus_tag="JNZ89_000755"
     CDS             complement(22344..22664)
                     /locus_tag="JNZ89_000755"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HAY8934711.1"
                     /translation="MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIG
                     LENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHL
                     AQTA"
     gene            complement(22679..23758)
                     /locus_tag="JNZ89_000756"
     CDS             complement(22679..23758)
                     /locus_tag="JNZ89_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit EIIC"
                     /protein_id="HAY8934712.1"
                     /translation="MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGA
                     VPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAG
                     FFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGA
                     LTNSLTQWLQGMQQGSIVMLAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVVI
                     AAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVI
                     PSIMVGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVL
                     KSLARKNGSSTDEKEDDLDLDFEIN"
     gene            24067..26568
                     /gene="ptsP"
                     /locus_tag="JNZ89_000757"
     CDS             24067..26568
                     /gene="ptsP"
                     /locus_tag="JNZ89_000757"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY8934713.1"
                     /translation="MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRK
                     GNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDE
                     LEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALE
                     NGLTLVLKNIEFRLLDSDGATSSILEAHRSLAGDTSLRQHLLTGVSEGLSCAEAIVAS
                     ANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELT
                     PSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDG
                     NAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVE
                     AQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGG
                     DKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSM
                     EEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSN
                     DLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVL
                     PLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM
                     TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFST
                     GLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIF
                     SRLARRIMHEEFRNALVNAASADAIASLLQHELEL"
     gene            26580..27242
                     /gene="fsa"
                     /locus_tag="JNZ89_000758"
     CDS             26580..27242
                     /gene="fsa"
                     /locus_tag="JNZ89_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HAY8934714.1"
                     /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLP
                     RLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKMLKKE
                     GITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQALLEMHAPES
                     MVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTT
                     HL"
     gene            27253..28356
                     /gene="gldA"
                     /locus_tag="JNZ89_000759"
     CDS             27253..28356
                     /gene="gldA"
                     /locus_tag="JNZ89_000759"
                     /EC_number="1.1.1.6"
                     /EC_number="1.1.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional L-1,2-propanediol
                     dehydrogenase/glycerol dehydrogenase"
                     /protein_id="HAY8934715.1"
                     /translation="MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFA
                     QSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKA
                     LAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGA
                     PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAM
                     LAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVA
                     FGTLTQLVLENAPVEEIETVAAFSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGE
                     TIHNMPGGATPDQVYATLLVADQYGQRFLQEWE"
     gene            28630..29247
                     /locus_tag="JNZ89_000760"
     CDS             28630..29247
                     /locus_tag="JNZ89_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HAY8934716.1"
                     /translation="MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGAR
                     QQIGNTLFYDPAYVRLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA
                     EYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
                     HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK"
     gene            complement(29274..30212)
                     /gene="yijE"
                     /locus_tag="JNZ89_000761"
     CDS             complement(29274..30212)
                     /gene="yijE"
                     /locus_tag="JNZ89_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine transporter YijE"
                     /protein_id="HAY8934717.1"
                     /translation="MSTGKLHTGSLMSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVT
                     SYIGAFDFTALRCIFGALVLFIVLLLRGRGMHPTPFKYTLAIALLQTCGMVGLAQWAL
                     VSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFS
                     SMKSAMLAILSGVSWGASAIVAKRLYTRHPRVDLLSLTSWQMLYAALVMSVVALLVPQ
                     REIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWL
                     LGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKSI"
     gene            complement(30273..32453)
                     /gene="katG"
                     /locus_tag="JNZ89_000762"
     CDS             complement(30273..32453)
                     /gene="katG"
                     /locus_tag="JNZ89_000762"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HAY8934718.1"
                     /translation="MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVD
                     LLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIR
                     MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
                     DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
                     ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAG
                     PTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
                     KYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
                     FLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDI
                     IDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVR
                     ALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDI
                     EMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFD
                     SSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADL
                     VFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWGKVMNLDRFDLL"
     gene            complement(32782..33672)
                     /gene="metF"
                     /locus_tag="JNZ89_000763"
     CDS             complement(32782..33672)
                     /gene="metF"
                     /locus_tag="JNZ89_000763"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HAY8934719.1"
                     /translation="MSFFHASQRDALNQRLAEVQGQINVSFEFFPPRTSEMEQTLWNS
                     IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTI
                     ARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAK
                     SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
                     QAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT
                     LNRAEMSYAICHTLGVRPGL"
     gene            complement(34021..36453)
                     /locus_tag="JNZ89_000764"
     CDS             complement(34021..36453)
                     /locus_tag="JNZ89_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HAY8934720.1"
                     /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
                     MVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAF
                     VSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAE
                     RAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIG
                     ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV
                     SGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAH
                     KEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLA
                     LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQ
                     SVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD
                     GLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGF
                     HVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTIL
                     SISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAR
                     EAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVA
                     RFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA
                     IQSDINRLAQLL"
     gene            complement(36456..37616)
                     /gene="metB"
                     /locus_tag="JNZ89_000765"
     CDS             complement(36456..37616)
                     /gene="metB"
                     /locus_tag="JNZ89_000765"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HAY8934721.1"
                     /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
                     DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG
                     GSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC
                     HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV
                     VTELAWWTNNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY
                     HPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLI
                     SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
     gene            37893..38210
                     /gene="metJ"
                     /locus_tag="JNZ89_000766"
     CDS             37893..38210
                     /gene="metJ"
                     /locus_tag="JNZ89_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015855437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HAY8934722.1"
                     /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR
                     QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPET
                     WEY"
     gene            38394..39002
                     /locus_tag="JNZ89_000767"
     CDS             38394..39002
                     /locus_tag="JNZ89_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX family permuted papain-like enzyme"
                     /protein_id="HAY8934723.1"
                     /translation="MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATH
                     SDYSHTGMLVIRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQK
                     LAQTVKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
                     QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW"
     gene            39147..39822
                     /locus_tag="JNZ89_000768"
                     /pseudo
     CDS             39147..39822
                     /locus_tag="JNZ89_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(39994..40230)
                     /locus_tag="JNZ89_000769"
     CDS             complement(39994..40230)
                     /locus_tag="JNZ89_000769"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934724.1"
                     /translation="MKAIQCCYFLALVSSNLMAGVMGNDNIFLSNSDSAALYCVAKIF
                     PDGENILIYKVNIINASSKKDVFFMKAQHQPTMT"
     gene            complement(40232..40625)
                     /locus_tag="JNZ89_000770"
                     /pseudo
     CDS             complement(40232..40625)
                     /locus_tag="JNZ89_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312891.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
BASE COUNT         9990 a        11162 c        10102 g         9371 t
ORIGIN      
        1 cccacacaga ttgtctgata aattgttaaa gagcagtgcc gcttcgcttt ttctcagcgg
       61 cgcggggtgt gcataatacg ctttcccgct acagagtcaa gcatttattt ttgctttctc
      121 tgtcggaatt ctcaggagaa ccccgctgac ccggcggcgt gtttgccgtt gttccgtgtc
      181 agtggtggcg cattataggg agttattccg gcctgacaag aggaaattta aaataatttt
      241 ctgaccgcgc aacattcaac caaatcagcc taaaactgcc agtttttcga gcgtttcgaa
      301 gccgtaacgc tgtaaaacgg gcaataattg ttcagcttct ggcgtcattg ccatacaaaa
      361 ggcaatattc gcatcggcag attttgcatc cggggcttca tgttctaaca accaggccgt
      421 tcggcgagca atcgctgcgc cagaatccac tagccgggtt ccctctggca gcacttgtaa
      481 cagttcttct tgtagtagag ggaaatgggt gcaacccaat acaacggtat ctggcggctc
      541 tttcattctt aaccacgggc gtaggatacg ttttagtgca tccagagaaa catcttcgcc
      601 atgtagcttc gcttcagcca actcaaccat ctctgccgag cccagcattt ctatctggca
      661 ttcattagcg aaacgcgcga tcagctcatg agtataagaa cgtttaactg ttccgcgggt
      721 tgccagtaat ccgacaatgc catttgccgt cagacgtgca gcaggtttaa tcgccggcac
      781 gacaccaaca accgggaagt cgaacttttc gcgtaatgca ggaagtgaaa cggtactggc
      841 agtgttgcaa gcgaccacag ccagcgcaag gggataacgt tcttgcaccg cggtgacaat
      901 tgccaccact cgctcaacaa taaacgcttc gcttttttcg ccatacggga aagcgacgtt
      961 atcgaaagca taaatgtaat ggagatccgg taagagatgc cggatctcgt catagaccga
     1021 caacccaccg acgccggagt caaacaccag cacggtggga cgtggttcag aaggtgtagc
     1081 tgccagacaa ggtgtattcc cgtcctgcag tttggtagcc atagactgtc tcataatctt
     1141 tgtcgaacag gttggctatt ttaccacgaa ctgtcaggtg agaggtgacc ggatacgcaa
     1201 ccgcaagatc ccacaagctc acaccgccca ttttaacggt ttgataagga taagatgagt
     1261 aatccttatc atagcgagtg cctaaatact gataagtaat accccagtcg aagtcataca
     1321 actgccagtc gagctggtat ttcacctgct gtttagcacg gcgtaacaac ggcgtgtcgg
     1381 taatcgcatt gcgcgcatcg acataatcat aactcacagt atgcgtcagt ggtccggtat
     1441 caaaattggc ggtcgcctcg acgcccttaa tccgcgcttt cccttcgttg taatatttca
     1501 gggtgtgatc atcataatcg atcaagtcac tgacatcgtt acgatatccg gaaatacgcc
     1561 agttcacccc agcggttaag ccttcaaacg cgccttccca ctgtttgctt ttctccgggt
     1621 ccagattcgg atttccgtag aagccataca gttgccccag atttggtgcc ttataagatg
     1681 tcccgtagga agcaatgaag cgataacctt cgatgaattc ccaaccggcg ctggtttgcc
     1741 aggttccatg acgaccaaac tgtgagttat cgtcactgcg tgctgcgcct tcaaaggtaa
     1801 aatcgccgac ttgttgcagc ccggtcagat agatgccggt attacgttga tcatatccat
     1861 cctcaacata acctgtaccc ggcgtcgtag tctgtttctg ccagtcgaca cccgcaccaa
     1921 tactaccgtg accaacgatg acattgtttg cccactggac ggtgtattgc ttcatctcat
     1981 cgagcgtcgc cgacgaatca taacgaccat aatggggatc gtagttgtaa tctttgctat
     2041 ggctatagct ggtaatgagt tgtgatttaa tcagttcgcc gttatagcgc agcccggcgt
     2101 cccaactttg gctatagagt ttacggatat cgagcaacgg tgaaccggga gaataatacg
     2161 cgtcataatt ggtacggtta tcatagccat agccgcgcac aaagccgctc caggcatcag
     2221 taaagttatg ctccagcgcg ccataaagcg ttttacttaa aaaaacatcg ttatctgtct
     2281 gcgcttgcgt tccggtatta ccataggcaa caacatcata accatgagta tgggcataat
     2341 cgcccaacag cgttacccgt gtcttatccc ccagttgttg ctgcgtagag acatcatagt
     2401 tctgataact attgcttccc caccctgctg aaatttccgt tccggggtca tcgcgcgtcg
     2461 tgatgatatt caccaccccg cctattgcat cggaaccata aacagcggag cgcggcccac
     2521 ggatatattc aacacgctgg acaagcgcac gcaataggga actggctaag gtcggcagaa
     2581 ccactcaccc ccgccagatt caggcgtacg ccatcaatta acaccaacac atgactggca
     2641 tttgtaccgc gaataaaaat agatgagagc tgacctgaac cgccgttttg ggtgatatcg
     2701 acgcccggaa gacggcgcag cacatcattg accgaggtcg actgccagcg gtcgatatcc
     2761 tgacgggtca caacggtggt tggtgcaagc acagtgctgc gcggctgttc aaaacggtta
     2821 gcagtaacga cgagagtatc cgggctggta tcctgtgccc aagcggaaaa ggctgtgaca
     2881 gaacacgccg tcagcagcga agctttttta atcattgtaa agcatccaca atagaagaag
     2941 gatgccgcag gtttcatcaa tattacgcga tgatgagacg ttggccggca ggtcttcggg
     3001 cttggagggg tatctaagat actaagagat gatgacttcc caccggatgg cagtgtccgc
     3061 ataacgcaat catcgcacct ttccttaccg ctgcgcgtca gctccagatt cgcactggat
     3121 tccctattaa ctcacaggac cggcaagtgg atgctacagg ttgtaacaag ttactgtcca
     3181 gacgtagctc acaaatagga attcatcaag atctggacat ctgatgagca atccctacaa
     3241 tcgccgcgta ctttaatttt tcaggataca tcatgacccc cgaacacctt ccaacagaac
     3301 agtatgaagc gcagttagcc gaaaaagtgg tacgtttgca aagtatgatg gcaccgtttt
     3361 ctgacctggt tccggaagtg tttcgctcgc cggtcagtca ttaccggatg cgtgcggagt
     3421 tccgcatctg gcacgatggc gatgacctgt atcacatcat tttcgatcaa caaaccaaaa
     3481 gccgtatccg cgtggatagc ttccccgccg ccagtgaact tatcaaccag ttgatgacgg
     3541 cgatgattgc gggtgtgcgt aataatcccg ttctgcgcca caagttgttc cagattgatt
     3601 acctcaccac gctgagtaat caggcggtgg tttccctgct ataccataag aagctggatg
     3661 atgagtggcg tcaggaagcg gaggccctgc gcgatgcact gcgcgcgcag aatctgaatg
     3721 tgcatctgat tggtcgggca acgaaaacca aaatcgagct ggatcaagat tacatcgacg
     3781 agcgtctgcc ggtcgcaggg aaagagatga tctaccgtca ggtagaaaac agctttaccc
     3841 agccgaacgc ggcgatgaat attcagatgc tggaatgggc gctggacgta accaaaggct
     3901 caaaaggcga tttactggag ctgtactgcg gcaacggtaa cttttcatta gcgctggcgc
     3961 gcaattttga tcgggtatta gccaccgaaa tcgctaagcc gtcggttgct gctgcgcaat
     4021 acaacatcgc agctaaccat attgataacg tacaaattat tcgtatggcg gcagaagaat
     4081 ttactcaggc gatgaatggt gtgcgcgagt ttaaccgcct gcaagggatc gacttaaaga
     4141 gttatcagtg cgaaaccatt tttgtcgacc caccgcgcag cggtctggac agtgaaaccg
     4201 agaaaatggt gcaggcgtat ccgtgtattt tgtacatctc ctgtaacccg gaaacgttat
     4261 gcaagaatct ggaaacatta agccagacgc acaaggtcga acgtctggct ctgtttgatc
     4321 agttccccta cacgcaccat atggagtgcg gcgtattact gaccgcgaag taaaacccat
     4381 gccggatgcg ccagcatccg gcataatacc gattactcag caacttcctg cttacggtta
     4441 cgcatcttcg cgccaatcca gaacaccata atgacggaga gtactgccgg gaagaagtta
     4501 gagccgatat ccggatattc cgcacgaact accgtgctgt acagcagtac gccgagaata
     4561 aaacaggcag ctgccagacc cggcaagcct accggcatag tgcgattaag ataacgttga
     4621 tgcaggcagt aaaccgtcag caccagggaa ataatcggga atacagaaaa tggcacaatg
     4681 gagctaaaca gcgctgcgaa agtaccatta atcgataagc cagcaactaa cgccagcagc
     4741 agcgtacctc tatcttgatt tgcttgtttc attactcgtc cttcacattt cccggaataa
     4801 ttgcggtttt ctcttgttca cggcgatacc agtaataagc ccctttcgaa atcattcgca
     4861 gttgcagtac cagtcgctct tctaattgcc gacgttgttc gacgccgacg tccaacgcct
     4921 cggcacccgc actgaagaca attgtcacca ttgcttcggc ttgcgcttca gtaaacgcac
     4981 gcggcatatg gttttcgagt tccagatagt ccgcaagttc cgcaatgaag tgctgaattt
     5041 cacgcgcaac ggcggcacga aacgcagcgg aggtgccgga gcgttcccgc aataataacc
     5101 ggaaggcgtt aggattatta ccgatgaact ccataaatgt ggagaccgag gtgcggatca
     5161 cactcccgcc tttggcgata cgctgacgcg cctggcgcat gagttggcgt agcattaaac
     5221 cgctctcatc aaccatggtc agacccagtt cgtctacgtc gcggaaatgc cgataaaaag
     5281 aggtgggagc aatgcccgct tcacgcgcca cttcacgcaa actcaggctg gcgaagctgc
     5341 gttcagcact taattggcta aatgcggctt ccaccagcga acggcgggtt ttttcttttt
     5401 gttgcgctct tatgcccatc acgatgtctg aatccttgcc aaaagtactg ctggcactat
     5461 accagagaat gaacatactg gattgctcca gtattgtgaa tgaacggtaa cgcaataaaa
     5521 catatttact ggccggttct tttacgtaca gcggaaacct gccgcttaaa cggagagtat
     5581 cgtcgataaa aatccaataa aacgtcaggg caaaagtaag aaacagacaa agcaaaggcc
     5641 gctcaggata tagccagata aatgacgggg atcaattggc ttacccgcga taaaatgtta
     5701 ccattctgtt gcttttatgt ataagaacag gtaagcccta ccatgccaca ttcctacgat
     5761 tacgatgcca tagtaatagg ttccggcccc ggcggcgaag gcgctgcaat gggcctggtt
     5821 aagcaaggtg cgcgcgtcgc agttatcgag cgttatcaaa atgttggcgg cggttgcacc
     5881 cactggggca ccatcccgtc gaaagctctc cgtcacgccg tcagccgcat tatagaattc
     5941 aatcaaaacc cactatacag cgaccattcc cgactgctcc gctcttcttt tgccgatatc
     6001 cttaaccatg ccgataacgt gattaatcaa caaacgcgca tgcgtcaggg attttacgaa
     6061 cgtaatcact gtgaaatatt gcaggggaac gctcgctttg ttgacgagca tacgttggtg
     6121 ctggattgcc cggacggcag cgtcgaaaca ctaaccgctg aaaaatttgt tattgcctgc
     6181 ggctctcgtc catatcatcc aacagatgtt gatttcaccc atccacgcat ttacgacagc
     6241 gactcaattc ttagcatgca ccacgaaccg cgccatgtac ttatctatgg tgctggagtg
     6301 atcggctgtg aatatgcgtc gatcttccgc ggtatggatg taaaagtgga tctgatcaac
     6361 acccgcgatc gcctgctggc atttctcgat caagagatgt cagattctct ctcctatcac
     6421 ttctggaaca gtggcgtagt gattcgtcac aacgaagagt acgagaagat cgaaggctgt
     6481 gacgatggtg tgatcatgca tttgaagtcg ggtaaaaaac tgaaagctga ctgcctgctc
     6541 tatgccaacg gtcgcaccgg taataccgat tcgctggcgt tacagaacat tgggctggaa
     6601 actgacagcc gcggacagct gaaggtcaac agcatgtatc agaccgcaca gccgcacgtt
     6661 tacgcggtgg gcgacgtgat tggttatccg agcctggcat cagcggccta tgaccagggg
     6721 cgcattgccg cgcaggcgct ggtaaaaggc gaagccaccg cacatctgat tgaagatatc
     6781 cctaccggca tttacaccat cccggaaatc agctctgtgg gcaaaaccga acagcagctg
     6841 accgcaatga aagtgccata tgaagtgggc cgcgcccagt ttaaacatct ggcacgcgca
     6901 caaatcgtcg gcatgaacgt gggcacgctg aaaattttgt tccatcggga aacaaaagag
     6961 attctgggta ttcactgctt tggcgagcgc gctgccgaaa ttattcatat cggtcaggcg
     7021 attatggaac agaaaggtgg cggcaacact attgagtact tcgtcaacac cacctttaac
     7081 tacccgacga tggcagaagc ctatcgggta gctgcgctaa atggcttaaa ccgcctgttt
     7141 taacacttta tcgaaatggc catccattct tgcgcggatg gcctctgcca gctgctcata
     7201 gcggctgcgc agcggtgagc caggacgata aaccaggcca atcgtgcggc gaggttccgg
     7261 cttaatacac ggcaaataaa caaccccatc gcgtttgcgc tccggcggca cagccagcgc
     7321 aggcagtaaa gtgatcccgc tacctgccgc caccatgtta cgcagtgtct ccaggctggt
     7381 cgcgcggaag tgtgtatctt catccgcccc ggcttcaaag cagaaaccca ttgcctgatc
     7441 gcgcaaacag tgaccatctt ccagcatcag cagtttttcc cctgccagat cggccatcgg
     7501 tacgcattcg cggttcgccc acgggtgatc ttcatagata gccagcaaca ttggctcatc
     7561 aaacaacggc acttcaatga atgcttcgct ctctttcacc agcgcgagga tcacgcaatc
     7621 gagtttgccg ctgtccagtt gcgccagtaa ctggtgggtc tgtgcttcat gcagatacat
     7681 ttccagcttt ggaaatgtct ggtgcagcat cgggataata tgcggcagca ggtacggtcc
     7741 aaccgtagga atcaaaccaa tatgcagcgg tccggacatc gtctcgccct gctggcttgc
     7801 catctcttta aggactttca cctcacgcag cacggtacgc gcctgatcca ccagcagcat
     7861 tcccgcctgg gtgaacaaca ctttacggct ggtccgctcc agcaacatca cgcccagctc
     7921 atcttccagc ttacgaattt ggccgctaag cgtcggctgg ctaacgtggc aggaatctgc
     7981 cgcacgccga aaatggcggt gttcagccaa tgccaccagg tactcaagat cacgaatatt
     8041 cattatccat cctccatcgc cacgatagtt catggcgata ggtagaatag caatgaacga
     8101 ttatccctat caagcattct gactgataat tgctcacaga aacggagcgg cacctctttt
     8161 aacccttgaa gtcactgccc gtttcgagag tttctcaact cgaataacta aagccaacgt
     8221 gaacttttgc ggatctccag gatccgcttt tttttgccat aaaaaagccc ggcgataagc
     8281 caggctcaaa tttgtacata taaatgttct taccccaacc gcgcctgcgc aaaagcaatc
     8341 gcttgggcca cctgctgcgg tgagacgccg ccttttgccg cacgcttgtc gaggcacgat
     8401 tgtagcgaca gaatcggata gacatcttcg ccaatcacgt ggctgaattt ctgcaactcg
     8461 tcgagcggca gatcttccag cggtttgccc tgacgaatgg cttccaccac cgcttcaccc
     8521 acgatatggt gcgcctcgcg gaaaggtacg cctttcgcca ccaggtaatc cgccagttcg
     8581 gtggcgttgg cgtaaccctg ctgagccgct tcctggcaac gtggacgttt cacctgaatg
     8641 ccgtccagca ccagcgccgc catatgcagg cagtccagcc aggtatcgaa cgcgtcgaac
     8701 agaccttctt tgtcttcctg catatctttg ttgtaagcca gcggcaaacc tttcagcgtc
     8761 atcatcatgc cggttaacgc accctgcacc cgaccgcatt taccgcgaat cagctccagc
     8821 gcatccgggt ttttcttctg cggcattaat gatgaaccgg aagtcacgcg gtcagaaagc
     8881 tccacaaacc ccgcttcgcc ggtgttaaag aaaatcagat cttcagcaaa acgcgacaga
     8941 tgcaccatgc cgatagcggc agccgacagc agttccaaca catggtcacg gtcagaaacg
     9001 ctgtccagac tgttacgggt cgccgaagca aagcccagcc agcctgctaa ctgttcacgg
     9061 tcgatttcat aggccgttcc cgccagcgcg ccacagccta atgggctgac atccagacgc
     9121 ttaagcgcat cctgcaaacg gctttcatca cgcgccagca tctcaacata ggccaggcac
     9181 cagtgcgcga acgtcaccgg ctgggcgcgt tgcaggtgag tgtaacctgg cattaccgcg
     9241 tcctgattgt tttgtgcggt ttccaccagc gccgattgca gctgccggtt agccgtcagt
     9301 aactcgctaa cggtatcttt gcaccacagt ttcaggtcag tcgctacctg atcattacgg
     9361 ctacgcccgg tatgcagctt tttgcctaac tggcccactt tgtcgatcag tttgccttcc
     9421 acccagctat ggatatcttc ggcgtcgctt tcaaggattt gttgtggcct ggcgcgaaca
     9481 tcttccagca acacgttcag cgcctcttcc agttgcgcct gctcttctgc ggttaacacg
     9541 ccgaccgtta ccagggcttt ggaccaggcc acagagccaa caatatcctg ctccgccaga
     9601 cggtaatcaa agcgcagtga gtcgttgaat tgtttgaacc gttgatctgc tgcctgggta
     9661 aaacgcccgc cccaaagtgc cataactctg tttccttatt ttgaaattca atgccggaaa
     9721 gctgcgcctc cggctaacaa aacttaagct aaaatccgcg tacccatcgg cataccgtta
     9781 aacagtgccg gaagctgctc cgcatgacgc caggaggcga tatctaccgg acggcccagc
     9841 gtgcgggccg catccagcgc cgcgttcact ttcactatca tgccgtcagt aataatgccc
     9901 tgctcaatca gttgttctgc tttcgcggcg gtcatttcgg caatgcgttg ccctttgccg
     9961 tcgagaatgc cgctgacgtc ggagagcaaa atcagatccg cgcccagcgt tgccgccagc
    10021 gccgttgccg cctggtcggc attgacgttc atcagttgcc cttcgtctgt tacgccaatg
    10081 gagctgacca ccggcagata accgttctcc agcaaggagt tgataagctt aggcgaacct
    10141 ggctgcgcca gtccaacatg acctaactct tcatcaagct gggtcacttt gacgctgtcg
    10201 ccatcaccga gaaacaaacc tacagccgca atctgatgtt tcttcgccca tgccaacagg
    10261 gttttatttg ccgttcccgc cagtgctccg gtgataatgt ctatctgatc agcaggcgtc
    10321 acccgcaggc cgtttttctt tttcaccggc agattcagcc ctttcatcag ctcatccacc
    10381 acgcaaccgc cgccgtgcac aatcaccagc ggacgctgat gtgactcacg ataattcacc
    10441 agtgcgctaa acagacgttc cagcgcctct tcactatcca gcagtacgcc gcccagtttg
    10501 ataattaatg gattcatcat tgcaccctta aataagagac tgcgtttccg catagccgaa
    10561 acgaatattg gcgcactgta ccgcttgtgc cgccgcgcct ttcagtaagt tgtcttcggt
    10621 cgccacaata atcagatgct cgccctgaac ggcaaacccg atatcgcaaa atggcagccc
    10681 aacgacattt ttcagcgccg gaacgccttt gtcatacagc cgcaccagcg gtttatgggc
    10741 atacgcctgc tgtaacactt gcgcgacttg cgcctgggtc acacccgatt tcaggcggca
    10801 ggtaatggtt tcgagaatgc cgcgcgggaa attgcccaga tgtggggtga agataacgtc
    10861 agcaccgagg tgtgtggcga tctctggttg atggcgatga gtaaagacgc catacggttg
    10921 caggctaact tcacaaaaac tatttgaaat cgctgcctta cgtcctgcac cgctcacgcc
    10981 gctggtggcg ttaatcgccg gccactgatt gaggtcaaga agatcggcat caatcaacgg
    11041 tttcagcgcc agctgtgccg ccgtcggata acagcctggc accgcaatca aattcgcttc
    11101 ttttaattta ttaccgcacc actccgccag accgtaggct gcctgttcca gcagttccgg
    11161 gtattgatgg gtaaagccgt aatatttttc atagaaggtg gcgtcgttaa cacgaaacgc
    11221 gccggaaagg tcgaacacca cgcagcccgc ttcaagaaac tgcggcgcta aatcgtggct
    11281 aacttcatgg gcggtggcga gaaacactac gtccacccct gggctaaact cgctgatatc
    11341 cgacatcggc tgcaacggca gctcaacgat gccttttagc tgcggatgca aatcggagat
    11401 taactttccc gcatcattgc tttgcgctga aacagtcaaa gcggttatgt tcatatgcgg
    11461 atggcgattt acataggtca ctagctctgc gccagcgtag ccgctggcac ccacaatcag
    11521 cgtattcaac atcggggcta ttcaccttct tatgtctggt tgccaggtta aacgtaaaac
    11581 attcacctta cggctggtgg gttttattac gctcaacgtt agtgtatttt tattcataaa
    11641 tactgcatga atattgatac tatcatgacc agaggtgtgt caacaatgaa aaacaaatta
    11701 ccgccattta tcgagattta ccgcgctctg attgccacac cttcaataag cgctacggaa
    11761 gaggcactcg atcaaagcaa tgcagattta atcactctgc tggcggactg gtttaaagat
    11821 ttgggcttca atgtggaagt gcagcctgtt ccaggaactc gcaacaaatt caatatgctg
    11881 gcaagtatcg gacagggggc tggcggcttg ttgctggcgg ggcataccga tacggtgcca
    11941 tttgatgacg gtcgctggac gcgcgatccg tttacactga cggagcatga cggcaagctt
    12001 tacggcttag gcaccgccga catgaaaggc ttttttgcgt ttatccttga tgcgctacgc
    12061 gatatcgacg tcacgaaact gaaaaaaccg ctctacattc tggcgactgc tgatgaagaa
    12121 accagtatgg ccggagcgcg ttattttgcc gaaactaccg ccctgcgccc ggattgcgcc
    12181 atcattggcg aaccgacgtc actacaaccg gtacgcgcac ataaaggtca tatctctaac
    12241 gccatccgta ttcagggtca gtcggggcac tccagcgatc cagcacgcgg agttaacgct
    12301 atcgaactaa tgcacgacgc catcgggcat attttgcaat tgcgcgataa cctgaaagaa
    12361 cgttatcact acgaagcatt taccgtgcca taccctacgc tcaacctcgg gcatattcac
    12421 ggtggcgacg cttctaaccg tatttgcgct tgctgtgagt tgcatatgga tattcgtccg
    12481 ctgcctggca tgacactcaa tgaacttaat ggtttgctca acgatgcatt ggctccggtg
    12541 atcgaacgct ggccgggtcg tctgacggtc gacgagctgc atccgccgat ccctggctat
    12601 gaatgcccac cgaatcatca actggttgaa gtggttgaga aattgctcgg agcaaaaacc
    12661 gaagtggtga attactgtac cgaagcgccg tttattcaaa cgttatgccc gacgctggtg
    12721 ctcggtccgg gttccatcaa tcaagctcat cagcctgatg aatatctgga gacgcggttt
    12781 attaaaccca cccgtgagtt gattatccag gtaattcacc atttttgctg gcattaaaac
    12841 gtaggccgga taaggcgctc gcgccgcatc cggcaccgtt gccaaactcc ggtgccgcaa
    12901 taatgtcgga tgcgatgctt gcgcatctta tccgacctac acctttggtg ttatgtatgg
    12961 cgatttttta acatttccat aagttacgct tatttaaagc gtcgtgaatt taatggcgta
    13021 aattcctgct atttattcgt ttgctgaagc gatttcgcag catttgacgt caccgctttt
    13081 acgtggcttt ataaaagacg acgaaaagca aagcccgagc atattcgcgc caatgcgacg
    13141 tgaaggatac agggctatca aacgataaga tggggtgtct ggggtaatat gaacgaacaa
    13201 tattccgcat tgcgtagtaa tgtcagtatg ctcggcaaag tgctgggaga aaccatcaag
    13261 gatgcgttgg gagaacacat tcttgaacgc gtagaaacta tccgtaagtt gtccaaatct
    13321 tcacgcgctg gcaatgatgc taaccgccag gagttactca ccaccttaca aaatttgtcg
    13381 aacgacgagc tgctgcccgt tgcgcgtgcg tttagtcagt tcctgaacct ggccaacacc
    13441 gccgagcaat accacagcat ttcgccgaaa ggcgaagctg ccagcaaccc ggaagtgatc
    13501 gcccgcaccc tgcgtaaact gaaaaaccag ccggaactga gcgaagacac catcaaaaaa
    13561 gcagtggaat cgctgtcgct ggaactggtc ctcacggctc accctaccga aattacccgt
    13621 cgtacactga tccacaaaat ggtggaagtg aacgcctgct taaaacagct cgataacaaa
    13681 gatatcgctg actacgaaca caaccagctg atgcgtcgcc tgcgccagtt aatcgcccag
    13741 tcatggcata ccgatgaaat ccgtaagctg cgtccaagcc cggtagatga agccaaatgg
    13801 ggctttgccg tagtggaaaa cagcctgtgg caaggcgtac caaattacct gcgcgaactg
    13861 aacgaacaac tggaagagaa cctcggctac aaactgcccg tcgaatttgt tccggtccgt
    13921 tttacttcgt ggatgggcgg cgaccgcgac ggcaacccga acgtcactgc cgatatcacc
    13981 cgccacgtcc tgctactcag ccgctggaaa gccaccgatt tgttcctgaa agatattcag
    14041 gtgctggttt ctgaactgtc gatggttgaa gcgccccctg aactgctggc gctggttggc
    14101 gaagaaggtg ccgcagaacc gtatcgctat ctgatgaaaa acctgcgttc tcgcctgatg
    14161 gcgacacagg catggctgga agcgcgcctg aaaggcgaag aactgccaaa accagaaggc
    14221 ctgctgacac aaaacgaaga actgtgggaa ccgctctacg cttgctacca gtcacttcag
    14281 gcgtgtggca tgggtattat cgccaacggc gatctgctcg acaccctgcg ccgcgtgaaa
    14341 tgtttcggcg taccgctggt ccgtattgat atccgtcagg agagcacccg ccataccgaa
    14401 gcgctgggcg agctgacccg ctacctcggt atcggcgact acaaaagctg gtcagaggcc
    14461 gacaaacagg cgttcctgat ccgcgaactg aactccaaac gtccgcttct gccgcgcaac
    14521 tggcaaccaa gcgccgaaac gcgcgaagtg ctcgatacct gccaggtgat tgccgaagcg
    14581 ccgcaaggct ccattgccgc ctacgtgatc tcgatggcga aaacgccgtc cgacgtactg
    14641 gctgtccacc tgctgctgaa agaagcgggt atcgggtttg cgatgccggt tgctccgctg
    14701 tttgaaaccc tcgatgacct gaacaacgcc aacgatgtca tgacccagct gctcaatatc
    14761 gactggtatc gcggcctgat tcagggcaaa cagatggtga tgattggcta ttccgactca
    14821 gcaaaagatg cgggcgtgat ggcagcgtcc tgggcgcaat atcaggcaca ggatgcatta
    14881 atcaaaacct gcgaaaaagc gggtattgag ctgacgttgt tccacggtcg cggcggttcc
    14941 attggtcgcg gcggtgcacc tgcccatgcg gcactgctgt cacaaccgcc aggaagcctg
    15001 aaaggcggcc tgcgcgtaac cgaacagggc gagatgatcc gctttaaata tggtctgcca
    15061 gaaatcaccg tcagcagcct gtcgctttat accggggcga ttctggaagc caacctgctg
    15121 ccaccgccgg agccgaaaga gagctggcgt cgcattatgg atgaactgtc agtcatctcc
    15181 tgcgatgtct accgcggcta cgtacgtgaa aacaaagatt ttgtgcctta cttgcgctcc
    15241 gctacgccgg aacaagaact gggcaaactg ccgttgggtt cacgtccggc gaaacgtcgc
    15301 ccaaccggcg gcgtcgagtc actacgcgcc attccgtgga tcttcgcctg gacgcaaaac
    15361 cgtctgatgc tccccgcctg gctgggtgca ggtacggcgc tgcaaaaagt ggtcgaagac
    15421 ggcaaacaga gcgagctgga ggctatgtgc cgcgattggc cattcttctc gacgcgtctc
    15481 ggcatgctgg agatggtctt cgccaaagca gacctgtggc tggcggaata ctatgaccaa
    15541 cgcctggtag acaaagcact gtggccgtta ggtaaagagt tacgcaatct gcaagaagaa
    15601 gacatcaaag tggtgctggc gattgccaac gattcccatc tgatggccga tctgccgtgg
    15661 attgcagagt ctattcagct acggaatatt tacaccgacc cgctgaacgt attgcaggcc
    15721 gagttgctgc accgctcccg ccaggcagaa aaagaaggcc aggaaccgga tcctcgcgtc
    15781 gaacaagcgt taatggtcac tattgccggg attgcggcag gtatgcgtaa taccggctaa
    15841 tcttcctctt ctgcaaaccc tcgtgctttt gcgcgagggt tttctgaaat acttctgttc
    15901 taacaccctc gttttcaata tatttctgtc tgcattttat tcaaattctg aatatacctt
    15961 cagatatcct taaggaattg tcgttacatt cggcgatatt tttttcaaga caggttctta
    16021 ctatgcattc cacagaagtc caggctaaac ccctttttag ctggaaagcc ctgggttggg
    16081 cactgctcta cttttggttt ttctctactc tgctacaggc cattatttac atcagtggtt
    16141 atagtggcac caacggcatt cgcgactcgc tgttattcag ctcgctgtgg ttgatcccgg
    16201 tattcctctt tccgaagcgg attaaaatta ttgccgcagt aatcggcgtg gtgctatggg
    16261 cggcctctct ggcggcgcta tgctactacg tcatctacgg gcaggagttc tcgcagagcg
    16321 ttctgtttgt gatgttcgaa accaacacca acgaagccag cgagtattta agccagtatt
    16381 tcagcctgaa aattgtgctt atcgcgctgg cctatacggc ggtggcagtt ctgctgtgga
    16441 cacgcctgcg cccggtctat attccaaagc cgtggcgtta tgttgtctct tttgccctgc
    16501 tttatggctt gattctgcat ccgatcgcca tgaatacgtt tatcaaaaac aagccgtttg
    16561 agaaaacgtt ggataacctg gcctcgcgta tggagcctgc cgcaccgtgg caattcctga
    16621 ccggctatta tcagtatcgt cagcaactaa actcgctaac aaagttactg aatgaaaata
    16681 atgccttgcc gccactggct aatttcaaag atgaatcggg taacgaaccg cgcactttag
    16741 tgctggtgat tggcgagtcg acccagcgcg gacgcatgag tctgtacggt tatccgcgtg
    16801 aaaccacgcc ggagctggat gcgctgcata aaaccgatcc gaatctgacc gtgtttaata
    16861 acgtagttac gtctcgtccg tacaccattg aaatcctgca acaggcgctg acctttgcca
    16921 atgaaaagaa cccggatctg tatctgacgc agccgtcgct gatgaacatg atgaaacagg
    16981 cgggttataa aaccttctgg atcaccaacc agcagacgat gaccgcccgc aataccatgc
    17041 tgacggtatt ttcgcgccag accgacaagc agtactacat gaaccagcaa cgtacgcaga
    17101 gtgcgcgtga atacgacacc aacgtgctga agccgttcca ggatgtgctg aatgaccctg
    17161 cgccgaagaa actgatcatc gttcatctgc tgggtacgca tatcaaatac aaataccgct
    17221 acccggaaaa tcagggcaag tttgatggca ataccgatca tgttccgcca ggattaagcg
    17281 cagaagagct ggaatcatat aacgattatg acaacgctaa cttgtataac gatcatgtgg
    17341 ttgccagcct gattaaagac tttaaagcgg cagacccgaa cggattcctg gtttacttct
    17401 ctgaccacgg tgaagaggtt tacgacacgc cgccgcacaa aactcagggg cgtaacgaag
    17461 acaacccgac gcgccacatg tacaccattc cgttcctgct gtggacgtcg gaaaaatggc
    17521 aagcgactca tccccgtgat ttctcacagg atgtcgatcg taaatacagc ctggcggaac
    17581 tgatccacac ctggtcagat ttggcgggct tatcttacga cggttacgat ccaacccgtt
    17641 cagtggtgaa tccgcagttc aaagaaacta cccgctggat tggtaacccg tacaagaaaa
    17701 acgcgctgat cgattacgac actctgccgt atggcgacca ggtaggtaat cagtaattat
    17761 cagccaggcg ctatttgccg gatgcgacgc ttgacgcgtc ttatccggcc tacagatcgc
    17821 ggcggtaggc tggataaggc gtttacgcca catccggcaa tacaactgcc gcaatgttta
    17881 catcgaactc ccctcaggcc acacttttca ggtggccttt tttaataatg ccagttactg
    17941 ttttcccgtc tacataccta agggaataac atgtatcacg acatcagcta tctgctctcc
    18001 cgcctgatca acggcccgct gtccctgcgc cagatttact ttgccagcag taacggcccg
    18061 gtgcccgatc ttgcgtatca ggtcgatttt ccacggctgg aaattgtgct ggaaggtgag
    18121 tttgttgata ccggcgctgg agcaacgtta gttcccggcg atgtgctgta cgttgccgct
    18181 ggtggctgga atttcccaca atggaaaaca cccgctacca cctttagcgt gctgtttggc
    18241 aaacagcaac tcggcttcag cgtcgtgcaa tgggatggca aacaatatca aaatctggcg
    18301 aagcaacacg tcgcccgacg cggcccacgt ataggttctt ttctgctaca aacgctcaat
    18361 gaaatgcaaa tgcagccgca ggagcagcaa acggcaaggc ttatcgtagc cagcctgctt
    18421 agccactgcc gcgatttgct cggcagccaa atccagaccg cctcacgcag ccaggcacta
    18481 tttgaagcta ttcgcgatta tatcgacgaa cgctatgcct ccgcgcttac ccgcgaatct
    18541 gtcgcacagg cattctatat ttcaccaaac tatctctcgc acctgtttca aaaaacgggg
    18601 gccattggtt ttaacgaata cctgaatcac acgcgactgg agcacgctaa gacgttattg
    18661 aaaggctatg acctgaaggt aaaagaagtg gcgcacgcct gcggctttgt cgacagcaac
    18721 tacttctgcc gtctgtttcg taaaaacacc gaacgctcgc cgtcggaata tcgccgacag
    18781 taccacagcc aactgacaga aaaaccgact actccagaat aagatgggtt tgctgcggcg
    18841 cagaaagcac tttgcgcacc gcgctcatta cccgctgcgg ctcacgcagg aatgcgtaga
    18901 tgctgcattg cacatagcgg caatgttcaa atcgctcggc accggcaagc tcgatatccg
    18961 taatcaacag agcaacatcc gcccgacgga tatcctcgtc cgctaaacga ttctccgttc
    19021 ccagcgcgcc ctgagtttca atgctgacgc cccacttctc taactggcac aacttttcca
    19081 gccgttccgc cgccatataa gtatgcgcca cgccgcttac gcaggcggtt actgccacca
    19141 ggtatgccat tttaacctcc cacggtaacc tgaaatccgg cccgttctgc catttcgcgc
    19201 atcgttgcca catcggctga tgacggcgca gcaacatcct tcatcgacca tgttttcccc
    19261 agcaggcggt atttcggctc gccgtactga tgaaacggca acagatggat ctgcctgata
    19321 ttcagcggga tcagcacgtc cagcgcctgc tgcatattct cccggctgag tgtgaaaccg
    19381 gggatcagcg gcaaacgcgg gatcacgttg acaccctcac tcaccagcaa acgcaggttc
    19441 tccagtacgc gtggcaggtt catcttcacc acatcccgcg cctgagtcgc gtccataatt
    19501 tttaaatcga acaacacttc atcgcacaat ttcgccagcg gtaacagctt gctggctggt
    19561 gcgtctccgg cagtttcaat ggcacatgag acaccccaca gccgcagtcg ctgtaaaaaa
    19621 cgggtagcaa actccgcctg cattaacact tcgccgccag aaagcgtgac gccgccgccg
    19681 gacgtgcgaa aaaaaatgtc atctttcatc acttcccgtt ccagagcgtc aaggctgata
    19741 tcgcgaccaa tccgttcaaa cgccccggag gggcattcat ccgcatcacg caaacatttc
    19801 gcacagtgca gacatttcgc ctctctgcgt accgtctgga ttttgccgga gatcgactcc
    19861 ggattagcac accacgggca aagatgcgga cagcctttaa aaaagaccac cgtacgaatg
    19921 ccctcgccgt cattcagtga ataacgctga atgttgaaaa tgcgcgccac atcattgagg
    19981 cgcgtttcca caacgttaca gctgatgcgc tgtccggcgg atgatgtcat cctggatctc
    20041 cttcgacagt tcgacaaaga aggcgctgta tccggcaacg cgcaccacca gcccggcata
    20101 atcttgtggg cgctgttgcg cttcccacaa cgtgtcggcg ttcaccacgt taaactgaat
    20161 atgctgcaac ttaagctggg taaacgcccg taagaagtcg gccagtttgc gtaatcccgc
    20221 ttcaccttcc agggtcgccg gagtgaattt cacgttcagc aacgtaccgt tagacagcag
    20281 cgtattatcg agcttactga ctgacttcag taccgctgtt ggcccttgtt cgtcctggcc
    20341 cagcataggt gacaagccgc cgtctgccag ctgttctccg gcaaaacgac cgtctggcgt
    20401 cgcgccaacc accgatccca acgggacgtg agcagaaacg gtatacgatc ccggcgtgaa
    20461 gtaaccaccg cgcgggttct ggtatttttc cacttctttg cagtagtggc gcaacagttc
    20521 ggcgctaatg ttatccacct cgtcgatatc gttaccatat ttctcaaagc ggttaattaa
    20581 gcgagcgcgg actttttcgc cttctggcgt tgcaaagttg gcttttaata ccgacagcaa
    20641 ttcgtcaaaa cttaaacgct gttgctcaaa aaccatccct ttcaacgcat ggagagaatc
    20701 gctcaggttg gcgataccga tcccctgtac gccggagaag ttataacgcg cgccgccatc
    20761 ggtaatatcg cgaccttttt ccagacaatc gctgataaaa gacgagagca gcggtacagg
    20821 tgcccagtcg cgatggccga tatcacaaat attgctgccc tcaaccatca gggtgatgta
    20881 gtggctgatc ttggcgcgga tctgctccag taaaccttca taagtcagcg cagcattgcc
    20941 ttcattttca tgcaggcaga tttccatcac tttcagcaga ttaaacatcg cgatgtcatg
    21001 caagccgtag gttctgccgg gaatagataa ttccacacag cccactacgg aatagtcgcg
    21061 cgcatcttcc agcgaaacgc cacggttgag gaacgctggt accaccactt catcgttaaa
    21121 gatttgcgga ataccggtgc cgaggcgaat ggtttcggcg gttttcatca ggaatggcgt
    21181 gtcgatcaag gcgttagtgc gcacgccgag gttcggttgc ggtaattgca cgctttgata
    21241 ggcgtcaagg caaaggaacg aaagcacgtt caccgcgcta cgtccgttct cggttaaccc
    21301 gccgagcagt gcggtatagc cggtcgggaa acctgcgaaa taacgcgcgc tgctggtgga
    21361 gcgcaacagc acgatgtcgt tgcatttcac ccataaagat tcgagcagtt ctttcaggaa
    21421 cgccggatct tcgcccgggg ttaaagatgc ctgatagaac ggcaacatat actggtcgaa
    21481 gcgccctaaa gacagcgaac tggcgttgga ttcgtattgc agaatgatgt tcatgtacca
    21541 gaataactgg cacgcctgcc agaacgtctg cggcttatgt tcggcgttat ggcgagagat
    21601 ctccgcaata gtcagcagtt cttcgcgacg ctgggcatct gtgcagtttg ccgccatcgt
    21661 ttccgccagt acagcgtaac gcaaaatgtg tttctgcgag gcttccagca gtaacagcgc
    21721 tgcctgataa aagtgattct ccggctgttg ctgacaatgt tgctgcatct gtgccaccaa
    21781 ctcccccagc ccgtgattca acaggcgtgg gtaatcaata ataatgtgcc cctggccttt
    21841 atccgtctgg ttaatgctga aaatctgcgt gctggtcgcg gcttttactt catccgtcat
    21901 ctgcccgttg atgaaatctt tcatcgaacg tttttcccag tacgggaaca actcttcacg
    21961 atagatacgt ttatcttctt cgctgatagc aaagcggtcc tgcggacgcg tcgggaattg
    22021 atccagctct ttcagcagcc agtaagggtc catttccggc gacataatcc cggcgcgcgg
    22081 ttttacggtg cggttaccgg caatcagttc ttcatcacga atcgaaattt caacatgttc
    22141 aaggatatac gctgttgctt tcgcccggcg caatatcacc ggttcgcctt cggtttgccg
    22201 atggctggcg gtataaagca gcgcccgctc cagcgagatt tcacgggtat tggcaaacag
    22261 tgcagttttg aggcgagaga tacgattcgt catgaggaac tcctgtggga aagcgaaccc
    22321 gcccttgcga gcgggagaag aacttaagcg gtttgcgcca ggtgagcttc aattttgctc
    22381 ataatggcgt cagcacgttt tactgcatcg ctgatgttga cgcgcacgat ggtcttgcca
    22441 gcaaaacgct cttcaaactt gatgccgata tctttggtca gaatcaccat atcagcgctc
    22501 gccacatctt ccgcagtcag ttcattttcc agaccaattg acccctgggt ttctactttc
    22561 acttcccagc ctttcgcttt cgcggcactt tccagcgcct ctgctgccat ataggtatgg
    22621 gcaacacctg aaggacatgc ggttactgca ataattttcg tcatggctcg ttcctcaatt
    22681 aattaatttc aaaatccaaa tccaggtcgt cttctttttc atcagtcgaa gacccatttt
    22741 tacgcgccag acttttcagc acgttcacac aaacagccgt caccactgct ccgacagcca
    22801 ctgctgcgat ataacccagc ttgccttcaa ccaccggcag cacaatcaga ccaccccagc
    22861 ctgcatagca ctgcgcaccg accagcgccg cagttactgc accacaaact gaaccgacca
    22921 tgatggaagg aatgacacgc agcggatcgg cagcggcgaa aggaatcgcc ccttcagtaa
    22981 cgccaacaca gcccatcacc agtgccgctt tgccggtttc gcgctcttct gcggagaaat
    23041 ttttacgacc aatcagcgtc gccagcccca tccccagcgg cgggatacaa atacccacgg
    23101 cagcgatgac caccacggta taaacaccct gagcaacgca aatcagcatg aaggcatagg
    23161 ctactttgtt aaccggaccg cccatatcga acgccagcat cagacccatg atcaccgcca
    23221 gcataacaat gctgccctgc tgcatcccct gaagccactg agtcaggctg ttggtcaacg
    23281 cccctacagg ctcgcccaag ccccacatca tgatgcctgc ggtaatcagt gtgccgacga
    23341 taggaataat gaagataggc atcaccgagc gcagaacttt atgcaccgga attttcttca
    23401 ggtaatgcac cacgatgccg ccgataatcc cggcgatcag tgcaccaaag aagcccgcac
    23461 caaagctgtt accaacccag gcaccgatag cgcacggagc cagcgcagaa cgctctgcaa
    23521 tggagtaacc aatgtaagcg gcgaggaaag gcaccatcag cgtcaaacct gcaacgccga
    23581 tatcaaacag ttttttcaaa ttcggatcgg ctacggcatc cggcactgcg cctttgccat
    23641 acaacatgac ggaaaccgcc agcaaaatac cgcccgatac cacgaaggga atcatgtgtg
    23701 aaacgcccgt cattaaatgc tgacgggtat ttttcaggat ctgcaccaac tcattcataa
    23761 gctgctcccg ggcttgcgaa agcccatgtc catatttttg atggaggaaa caataggcaa
    23821 tcgcaggcgg agcaaacagt ggataaaaag gccatttact ggacttttgt aatatcagta
    23881 caaaaatgcg atccgcctca taacttgcga taaaccggaa gcatgccgca aaacggcgtc
    23941 ttgtgagacg cgtcgcaaat tgacggttac attacatttg tccagctttt ggcagatttg
    24001 tcacatggca ggccgttgcc gtgcgctctt atcctgtaaa cagaaaaccg taccgggaga
    24061 gaggcaatgg ccctgattgt ggaatttatt tgtgagctac ctaacggcgt acatgcgcgt
    24121 ccggcaagcc acgttgaaac gctgtgtaat actttttcat cacaaattga gtggcataac
    24181 ctgcgcactg accgcaaggg caacgccaaa agcgcccttg cgctgattgg caccgatacg
    24241 ctggcgggcg ataactgcca gttactgatt tccggggccg acgaacagga agcgcaccag
    24301 cgtttaagcc aatggctgcg cgatgaattc ccccactgcg atgcgccgct ggcggaagtt
    24361 aaatctgacg aactggaacc actgccggtt tcactgacca atctgaatcc gcaaattatc
    24421 cgcgcccgca ccgtgtgcag cggtagtgca ggcggcattc tgacgccgat ctcttcttta
    24481 gatctcaatg cgctgagtaa tcttcccgca gccaaagacg ttgacgccga gcaatccgca
    24541 ctggaaaatg gcctgacgct ggtactgaaa aacattgagt ttcgtctgct ggatagcgac
    24601 ggtgctacca gctcgatact ggaagctcac cgatccctgg ctggcgatac atctttacgt
    24661 cagcacttac tgacaggcgt cagcgaggga ttaagctgtg ccgaagcgat tgtcgccagt
    24721 gcgaatcact tttgcgaaga gttcgcccgt tccagcagca gctacctgca agaacgtgcc
    24781 ctggacgtac gcgacgtctg cttccagtta ctccagcaaa tctacggtga gcaacgcttc
    24841 ccggcaccgg gcaaactgac gcagcccgcc atttgtatgg ctgatgaact gactcccagc
    24901 cagttcctcg aactggataa aaatcacctc aaaggtctgt tactgaaaag tggcggcacc
    24961 acctcacata ccgtaattct tgcccgttcg ttcaacattc cgacactggt tggtgtagat
    25021 attgatgccc ttactccgtg gcagcatcaa acgatttata tcgacggcaa cgccggggcg
    25081 attgtggttg agccagggga agccgtggcc cgttattatc agcaagaagc ccgcgtacag
    25141 gacgcccttc gtgagcaaca gcgtgtctgg ctgacccaac aagcccgtac cgctgacggt
    25201 atccgcattg aaattgccgc taacatcgct cactccgtgg aagcgcaggc cgcattcggc
    25261 aatggtgcgg aaggcgttgg tttgttccgc actgaaatgc tctatatgga tcgcaccagt
    25321 gcaccgggcg aaagcgagct gtacaacatt ttttgtcagg cgctggagtc tgccaacgga
    25381 cgcagcatta ttgtgcgcac tatggacatt ggcggcgaca aacccgttga ttatctgaac
    25441 attccggcag aagctaaccc gttcctcggt tatcgcgctg tgcgtattta tgaagaatac
    25501 gcctcgctgt tcaccacaca actacggtcg atcctgcgcg cctccgctca cggcagcctg
    25561 aaaatcatga tcccgatgat ctcctcaatg gaagagatct tatgggtgaa agaaaaactg
    25621 gcggaagcca aacagcaact gcgtaacgaa cacattccgt ttgatgagaa gatccagctt
    25681 ggcattatgc tggaagtacc gtcggtgatg ttcatcatcg atcaatgctg cgaagagatt
    25741 gatttcttta gtattggtag taatgacctg acgcaatatc tgctggcagt ggatcgcgat
    25801 aacgctaagg ttactcgtca ctacaacagc ctgaatccgg cattcttgcg ggcgctcgat
    25861 tacgccgtgc aggcggtgca tcgccagggc aaatggattg gtctgtgcgg tgagctggga
    25921 gcgaaaggtt ccgtgctgcc gttgctggtc ggcttagggc tggatgaact cagcatgagc
    25981 gcaccatcaa ttccggcggc gaaagcgcgg atgacgcaac ttgatagccg tgagtgccgc
    26041 aagttgctca accaggcaat ggcctgccgt acttcgctgg aagtggaaca cctgctggcg
    26101 caattccgca tgacccaaca ggacgcaccg ctggtcaccg ccgagtgcat cacgctggaa
    26161 agtgactggc gcagcaaaga agaagtgctc aaaggcatga ccgataacct gctgctggcg
    26221 ggccgctgcc gctatccgcg taaactggaa gccgacttat gggcgcgcga ggccgttttc
    26281 tctaccggtc tgggctttag ttttgccatt ccacacagca aatcagaaca cattgagcaa
    26341 tccaccatca gcgtggcgcg tctgcaagcg ccggtgcgct ggggcgatga tgaagcgcaa
    26401 ttcatcatta tgttaaccct gaacaaacac gctgcgggcg atcagcacat gcgcattttc
    26461 tctcgcctcg ctcgccgcat catgcacgaa gaattccgta acgcgctggt taacgccgcc
    26521 tctgccgacg ctatcgccag cctgctgcaa catgaactgg aactgtaaaa ggaaacatca
    26581 tggaactgta tctggacacc gctaacgtcg cagaagtcga acgtctggca cgcatattcc
    26641 ccattgccgg ggtgacaact aacccgagca ttatcgctgc cagcaaggag tccatctggg
    26701 aagttctgcc gcgtctgcaa aaagcgattg gtgatgaggg cattctgttt gctcagacta
    26761 tgagtcgtga cgcgcagggt atggtggaag aagcgaagcg cctgcgcgac gccattccgg
    26821 gcattgtggt gaaaatcccg gtgacttccg aaggtctggc cgccattaag atgctgaaaa
    26881 aagagggtat tactacgctt ggcaccgcag tgtacagtgc tgcacaaggg ttactggccg
    26941 cgctggcagg ggcaaaatac gttgctccgt atgttaaccg cgtagatgcc cagggcgggg
    27001 acggcattcg tacggttcag gagctgcaag cgctgttaga aatgcacgca ccagaaagca
    27061 tggtgctggc ggccagcttt aaaacgccgc gtcaggcgct ggactgttta ctggcaggat
    27121 gtgaatccat caccctgccc ttagatgtag cgcaacaaat gctcaacacc cctgcggtag
    27181 agtcagctat agagaagttc gaacacgact ggaatgccgc atttggcact actcatctct
    27241 aaaggagcaa ttatggaccg cattattcaa tcaccgggta aatacatcca gggcgctgat
    27301 gtgattaatc gtctgggcga atacctgaag ccgctggcag aacgctggtt agtggtgggt
    27361 gacaaatttg ttttaggttt tgctcaatcc actgtcgaga aaagctttaa agatgctgga
    27421 ctggtagtag aaattgcgcc gtttggcggt gaatgttcgc aaaatgagat cgatcgtctg
    27481 cgtggcatcg cggagactgc gcagtgtggc gcaattctcg gtatcggtgg cggaaaaacc
    27541 ctcgatactg ccaaagcact ggcacatttc atgggtgttc cggtagcgat cgcaccgact
    27601 atcgcctcta ccgatgcacc gtgcagcgca ttgtctgtta tctacaccga tgagggtgag
    27661 tttgaccgct atctactgtt gccaaataac ccgaatatgg tcattgtcga caccaaaatc
    27721 gtcgctggcg ctcctgcacg tctgttagcg gcgggtatcg gcgatgcgct ggcaacctgg
    27781 tttgaagcac gcgcctgttc ccgtagcggc gctaccacta tggcgggcgg caagtgcacc
    27841 caggcggcgc tggcactggc agaactgtgc tacaacactc tgctggaaga aggcgaaaaa
    27901 gcgatgcttg ccgccgaaca gcatgtagta acccctgcgc tggaacgcgt gattgaagcg
    27961 aacacctatt taagcggtgt tggttttgaa agcggcggac tggcggcggc tcatgcggtg
    28021 cataacggcc tgaccgctat cccggacgcg catcactatt atcacggtga aaaagtggca
    28081 ttcggtacgc tgacgcagct ggtactggaa aacgcgccgg ttgaggaaat cgaaaccgta
    28141 gctgcattta gccatgcggt aggtttgcca ataactctcg ctcaactgga tattaaagaa
    28201 gatgtcccgg cgaaaatgcg aattgtggca gaagcggcat gtgcagaagg tgaaaccatc
    28261 cacaacatgc ctggcggcgc gacgccagat caggtttacg ccactctgct ggtagccgac
    28321 cagtacggtc agcgtttcct gcaagagtgg gaataaccta ctccaaactc ccggcttgtc
    28381 cgggagtttg aacgcaaaat tgcctgatgc gctacgctta tcaggcctac gcaatctctg
    28441 caatatattg aatttgcgtg ctttttaggc cagataaggc gttcacgccg catccggcac
    28501 tctgtgccag taatctgaaa ctcctacgtt gttcaggagt tttttatccg cttctggaca
    28561 ttttctctac agaacaatcg ttagcccgga aggtcgaatc tgtgactctt attttcacgg
    28621 acgaaccaga tgaaagcttc actggcgctg ctcagcctgc taacggcatt taccagccac
    28681 tccttaaaat ctcccgccgt tccaccaacc gtggtacaaa tccaggccaa taccaacctt
    28741 gccatcgcag acggtgccag acagcaaatc ggcaacacgc tattttacga tccggcgtat
    28801 gtgcggctta cctatcctgg cggtgatgtc ccgcaagaac gcggtgtatg ttccgatgtg
    28861 gtgatccgtg cattgcgcag ccagaaggtc gatttgcaga aactggttca cgaagatatg
    28921 gcgaagaatt ttgccgagta cccgcaaaaa tggaagttaa agcgcccgga cagcaacatc
    28981 gatcaccgtc gggtgcctaa tctggaaacc tggtttagcc gccacaacaa aacacgcccc
    29041 atcagtaaaa atgccggtga ctatcaagcg ggcgatattg tctcctggcg attagataac
    29101 gggctggcgc atattggggt ggtgtcagat ggcttcgccc gcgacggtac gccactggtg
    29161 atacataaca ttggcgcagg cgcgcaggaa gaagatgtgc tgtttagctg gcggatggtg
    29221 gggcattatc gttattttgt taaataagcg atcgccccac atgaagaaaa aattcagatg
    29281 ctttttacac tgacagcttc ttttttctta cggctcacca gcgccagtgc cagcacaatc
    29341 agcacaatac cgctaccttc aacggccccc ggattctcac cgagcagcca ccaggaaaag
    29401 agtacgccgc aaacgggaac ggccagcgtg cttaagctgg caatactggc aggcaagttt
    29461 ttcaatacaa acaaccataa gctccacgcc agcgccgtcg ccagaatcgc actgtaggcc
    29521 agcgcccaga acacggtggg ctgccagtca atttcacgtt gcggcaccag taaagcgacc
    29581 acactcatca ccagcgccgc atagagcatc tgccaggatg ttaacgataa taaatccacg
    29641 cgcggatgac gggtgtatag gcgtttagca acaatcgcgc tcgcccccca actaacaccg
    29701 gagaggattg ccagcatggc acttttcatc gaagagaaat cgagttgcca cggctgcaac
    29761 accaaaaata agccgaaagc ggcaatcaga atcgcgaaat attgcccacg tcgcaggcgt
    29821 tcaccgagaa acaacgcggc gaaaatcacc acccagaacg gcatggtata gctcaggatc
    29881 gccaccttcc ccgcacctcc gctgaccaac gcccactgcg ccagaccaac catcccgcag
    29941 gtttgtaaca gggcaatggc taaggtgtat ttaaacggcg tcgggtgcat tccgcgacca
    30001 cgtaataaaa ggacgatgaa taaaacgaga gcgccgaaaa tgcagcgtaa ggcggtaaag
    30061 tcgaaggcac cgatgtaact ggtgacttgc ttcatgaaaa tccagctata actccagata
    30121 agtgtgagca caaccaggcc actgattgcc agtgggttgc tctttcctgc ggcagacatg
    30181 agagatccag tgtgtagttt tcctgtggac actatacgcc ggtaaagaaa cttcagcgac
    30241 tgcctgaaag acagtcactg aagaaggtca gattacagca ggtcgaaacg gtcgaggttc
    30301 atcactttcc cccatgccgc tacgaagtct ttaacaaact tctcgtgggc atcgctgctg
    30361 gcgtaaactt ccgctaccgc acgcaggaca gagttagaac caaataccag atccgcacgg
    30421 ctggctgtgt atttcacttc gccggtttcg cggtcacgtc cttcgaacag ctctttcgat
    30481 tcgtcagtcg ctttccactc gtaacgcata tccagcaagt tcacgaagaa gtcattgctc
    30541 aatacgccaa cgcggtcagt gaagacgccg tttttgctgc tatcgaagtt ggcacccagt
    30601 acacgcatcc cgcccaccag cgcagtcatt tccggcgcgg tcagcgtcag ttgctgtgct
    30661 ttgtcgatca gcagtgactc ggtggtggaa acgtccagac gagcgcgata gttacggaaa
    30721 ccgtcagcaa ttggctccag cagctcaaac atctcaatgt cagtctgatc ctgacgcgca
    30781 tcaacgcgac ccggcgcaaa cggtacatga atgctcaaac ctgcggcgct tgcggctttc
    30841 tcaacaccaa ccacaccagc cagcacgatg atatccgcca gcgaggcttt accagactct
    30901 ttctggattt tctccagaac aggcagagca cgaacggctg cggcgttcac atcccagtcg
    30961 cgctgcggca ttaatgccag acgcgcaccg ttggcaccac cgcgtttgtc gccaccacgg
    31021 aaggtagaag cagatgccca ggccaccgat accagctcac taacagacag accagaatcc
    31081 gcaatcgcga atttcagatc gataatgtcc tgctcggtcg ggttgtagat cggctgcggc
    31141 agcggatctt gccagatcag atcttctttc ggcacttccg gcccgatgta gcgagatttc
    31201 ggccccatat ccctgtgcgt cagtttgaac caggcacggg caaaggcttc gttgaacgcc
    31261 tgcggatcgt tgaggaaacg acgagagatc ttctcgaact caggatcaaa acgcagcgtc
    31321 aggtcggtca ccagcattgt cggtttacgt ttcttcgacg gatcgaacgg atccgggata
    31381 atttccggtg cgtctaccgc ttcgaactgg attgctccag ccggactgcg ggtctgtacc
    31441 cactcatatt tgaacaggtt ctcgaagaaa tagttgctcc actgggtcgg cgtctgggtc
    31501 cagacaactt ccagaccaga ggtaatggca tctgcgccaa cgccgctgcc gtaagtgctc
    31561 gcccagccta aaccttgttc ttcaatcggt gcagcttctg gatcaggacc tacatttgat
    31621 gtcggaccgg caccgtgagt tttacccagc gtatgaccac ccgcaatcag cgccacggtt
    31681 tcttcgtcgt tcatgcccat gttgccgaag gtcgcacgga tagctgctgc cgcagaaagc
    31741 ggttcgccgc tgtgatccgg gccttccggg ttaacgtaaa tcagacccat ctcggttgca
    31801 cccagcggtg ctttcgccag cgcttccgga tgacggtgag tcagccaggc tttttcatca
    31861 ccccagttaa catccagatc cggttcccag acgtcttcac gaccggcacc aaaaccgaag
    31921 gtacggaagc cggagttttc cagcgccacg ttacctgcga ggataaacag gtcggcccag
    31981 gagattttct gaccatattt ctgtttgatt ggccacaaca ggcgacgcgc tttatcaagg
    32041 cttacgttat ccggccagga gttcagcggt gcaaaacgtt gctgaccacg acccgcgccg
    32101 ccgcgtccat cgattgaacg gtaagtacct gcgccgtgcc aggccatacg aataaacaga
    32161 ccggcgtagc tgccccagtc ggctggccac cacggctgag attctgtcag cagggctttc
    32221 agatcttttt tcaggccgta gtaatctaat ttgctgaatt ctttgcggta gtcaaagtcc
    32281 tcacccagcg ggttagaacg attagaatgt tggtttaaca ggtcaacacg gagttgattt
    32341 ggccaccagt cgcgagtggt tgtgcccgcc cccgcgctct ggtcgtgacc gccctgatgg
    32401 aacgggcatt tgccagtggc tgtcgtgtta tggatatcgt ctgacgtgct catcaatgtg
    32461 ctcccctcta cagtgttacc gttacgatac acagcgttag agagaagtta taattgaatt
    32521 aatccacgga tgcgatagtt gagatcttac atattgttgg ttaaagagat gtaggtcaaa
    32581 ttgatcgtaa ttaagctttt ttgattatgt ccgaattcgg acaaatgctt tataaaaaag
    32641 gggtttagct tcatatcctt caagtaatga gggagaaaac aaggctgaca accttatttt
    32701 cccgccctca tttcgaggca gcattttgtg ctctgtttaa aatttgtgat cactgtgtga
    32761 ttttcacaaa agccacacta tttataaacc aggtcgaaca cccagcgtat ggcaaatcgc
    32821 gtaactcatt tcagcgcggt taagcgtata gaagtggaaa tctttcactc cttcacggct
    32881 taaaatcttc accatatcca tggcaatatt cgcgcccacc agtttgcggg tttcggcatc
    32941 atcatccagg ccgtcgaaca tttgcgccat ccacgccgga atacgcacgt tggtcatatc
    33001 ggcaaatttc ttcgcctgtt taaagttaga taccggcaaa attcccggaa taatttccac
    33061 atcaatgccc gccgatacac agcggtcacg aaaacgcagg tagctttcga catcgaagaa
    33121 gaactgagta atcgcgcggt tggctccggc atcgactttg cgtttcagat taagcaaatc
    33181 cgcctgagcg ctttttgctt ccgggtgaac ttccggatac gccgccacgg agatatcgaa
    33241 atctgccact tcttttaata gcgtcaccag gtcagaagca tacatttctg gcttaccact
    33301 tcccggcggc agatcgccac gcagcgccac gatatgacga ataccgttat tccagtagtc
    33361 gcgtgcaatg gtgcgcaact cgtcgggcgt cgcatcaatg caagtaagat gcggtgccgc
    33421 ttccagacca gtgcgatctt taatgccttt aataatgctg tgcgtacggt cgcgctcgcc
    33481 ggagttcgcg ccataggtca ccgatacaaa cttcggtttc aggctgctaa ggcgatcgat
    33541 ggagttccac agggtctgct ccatttcact ggtacgcggc gggaaaaact cgaacgaaac
    33601 gttaatctgc ccctggactt ctgccaggcg ctgattcagg gcatcccgct ggctggcgtg
    33661 aaaaaagctc ataccttacc tcatcaatcg cttgtagtta tatgttgtgt tgtgcacatc
    33721 tatccgttta gacgtccaga tgtaaagatg aaggaaaagc cgaagggcgt caaccgaaaa
    33781 atgaccaatg atggtgagga aaaatcaggg aagatgaaaa aacttcagga tggtaagaaa
    33841 aagaaaatcc ggtatgcaaa gcaaaccgga ctgcaaatat aaactaacca tgtacttatt
    33901 gcttcttgcc ggattcgtcg taaacgctta atccggccta atcctatgat aattcaatat
    33961 atttcattag aaaccataaa cccgaaaaca tgagtaccgg gcattattaa atttctgaaa
    34021 ttacaacaac tgtgccagcc ggttgatatc cgactgaatc gccccggcgg tgacgtcgcg
    34081 ccccgcgcca ggcccacgga tcaccagcgg gttgtcgcga taccagcggc tttcgatggc
    34141 aaagacgtta tcgcacggca gcagtgatgc cagcggatgg tcttcacgca ccgcctccac
    34201 gcccacacgc gctttgccgt tggcatcgaa acgcgccacg tagcgcagca ccagccccat
    34261 ttcgcgggcc gcttccagcc gttgcaccat ctgctcgtta agttcatcgc cattttcaaa
    34321 gaaatggtcg atgctgccgc cttcgcaatg agcaggcacc agcgattcca cacgtacctg
    34381 gtccggttca atgttgtaac ccgcttcacg cgccagaatt accagcttgc gcattacgtc
    34441 tttgccggag aggtcgtcac gcggatcagg ctcggttaag ccctgctgcc acgcctgatc
    34501 caccagctcg gtaaacggca cgctaccgtc gaattgcagg aacagccagg agagcgtgcc
    34561 ggagaagatc ccgctgatcg acaaaatagt atcgccgctg tcgatcagat cgcgcacggt
    34621 gtggttgatc ggcaagcccg caccgacggt ggcattgtac agccagtgac gcccggtttt
    34681 ttcgaaggcg tcgtggatct ggcgatattt attgctgtcg ctggctcccg ccagtttgtt
    34741 ggcgctgata acgtggaaac cgtggctggc gaaatcaaga tactgatcag caagctgctg
    34801 gctggcggta acgtccagca ccactaaatc atcatacgga tgggcgcgca tccacaggaa
    34861 caacgactct tcatcctgct caaccgcttc atcgttgaag aaggctaacg cgcggctggc
    34921 gtccagcccg tcatagctca acaggctacg gcggctgtcc accacacctg ccagcacaaa
    34981 ctcaaagccg gtacgtgccg aaagcgtgct ctgctcacgg gcgaacagtt ccagccaacg
    35041 ggaaccgata ttgcccttac cgaacaatac caggccgatg cgtttttctg cgcggaagac
    35101 ggactgatgc agcccctgaa tcaggctttc ggtcgggccg gtgcgcagta ctgccaccag
    35161 gctgatgccg tcatcggact gccaggtaaa ttcgaccggc tggcctttca gttgctgcca
    35221 gaagcggtgg caatgcagcg ggttacgggt gacgcctgca ccgaccatcg ccaccagcgc
    35281 cagcccctga cgcaggcgca gttcgccagg taatcccgct tcgtcgagga ttttcagcgc
    35341 actgtcggcc acttctgagg tgtagcaaaa ttgcagcaac tggcgatcgt tatgtacgcc
    35401 aaccgccagc gggcgtacct gcgcgcgttt caggatttgg tcgatctctt tatgcgccag
    35461 tttgaaatcc tgactggcgg gcacctgaaa ctcaatcaaa cagacatcat cgtggctggt
    35521 gacaatacgc gcaccagtac cggaggccag cacgcgttca atgcgcgtgg aaccttgatc
    35581 cggcgtgtag ctacagcgca gttgcaggtc gatttcgctg ccagaaaccg gctgtaaagt
    35641 acgggcgtga agaacgggag ccgccaggcg cgccagttcg ctggcctcat ccagacgcag
    35701 caacggcagc aggcaggcat ctttcacttt acgcgggtcg gcactgtata ccccggcgac
    35761 gtcgctccag atggttacgc gagaaacacc cgccagcgca ccgatttgtg tcgcggaata
    35821 gtcggaaccg ttacgcccca gcagcaccgt ttcaccggcg ttgttgcggc tgataaatcc
    35881 ggtcaccacc agacgtttgc ccggatgttg caccagcagc tgttgcagca acgggtaaga
    35941 aagcccttca tcaacctgcg gttgtgcggc gcgttcagcg cgtaaaaact cgcgggcatc
    36001 aagccaggcc gctggcagcc cttgttgatt aagtaccgca gacatcaggc gtgccgacca
    36061 tacttccccg tggcccacca cttccgcata cactgcgtcg ttaataccgc tgtcgagcag
    36121 cgccgccagg cgctcaaggt cgctgacaaa agcgctaatg aggctatcag cttcttcagc
    36181 gggtagcaga ccgctaatca gatcgcactg atagcgacgc agcgtttgtt gaacctgatg
    36241 cgcagagaga cgatcggtct ggcttagttt caaccagtta atcaactggt tagtggtgct
    36301 accggcggcg gaaaccacca tcatatcgtc aggctgagag tactccgcca taatgcccgc
    36361 aacacgcaaa taacacttca catcagccag actactgcca ccaaatttat gcagttgacg
    36421 acctttcgcc cctgcctgcg caatcacact catttttacc ccttgtttgc agcccggaag
    36481 ccattttcca ggtcggcaat taaatcttcg ccatcttcaa taccggtgga gatacgcagc
    36541 agcgtctcgg agatcccggc ggcagcacgc gcttctggtg ccatgcctgc atgtgtcatg
    36601 gttgcggcgt gagagattaa actttccact ccccctaatg attccgccag cgtaaacaac
    36661 gacagcccgc ccaggaaacg acgcagcgtc tgctcatcgc catccagttc aaaactcaac
    36721 attgcgccaa agcctttttg ctggcgcgcg gcaatttcat gcccctgatt ttccggcagc
    36781 gacgggtgat acagtttttt caccaacggc tgggtttgca gatatttcac aatcgcctgc
    36841 gcgttgcgct gggccagctc catacgcggc accagcgttc gcaacccgcg tagcagcaga
    36901 tagctgtcaa acgcgccgcc cgtcacgcca atattgtttg tccaccaggc aagttcagtg
    36961 acaacgtccg ggtctttagc aatcaccacg ccagccacca cgtcagagtg accgttcaga
    37021 tatttcgtac atgaatgcaa caccagatcg gcacccaatg ccagcggatt ttgtaatgcc
    37081 gggcttaaga aggtgttatc caccacgctc accgccccga cttcccttgc cagatggcag
    37141 attttcgcaa tatccacgac gcgtaacaat ggattacttg ggctttctac cagtaccagt
    37201 ttaggttttt ctgccagcgc tgcccgtaat gcctgttcat cgccttgatc aacaaacaac
    37261 acgcgatagc aaccgcgttt cgccagactg tcgaacaggc gatagctacc gccgtagcag
    37321 tcgtgcggcg caaccagcag atcgccaggt ttcaaaaaga cggtcgttac caagtgaatc
    37381 gcggacatgc cggtattagt aagtactgcg ccagcaccgc cttccagttc tgccagcgca
    37441 cgctgaacca catcgcgcgt tgggttgccg cgacgtgagt aatcatgcgc gcgcggttca
    37501 ttaaatccgg taaagttata ggtgctggaa agatggatgg gagggacaac gcaaccatac
    37561 tgttcgtcgt catttaaccc gctacgcact gcgatggtgg cctgtttacg cgtcatgtga
    37621 tgaagtttcc tgggctttgt cggtgaaatg tcaggcacca gagtaaacat tgtgttaatg
    37681 gacgtcaata catctggaca tctaaacttc tttacgtata gattgagcaa atcccaaata
    37741 gccgttaaaa ttatatgcat tatcacgccg acaggtgcat tacacgatgt cacggtaacg
    37801 cctgtacggt aaactatgcg ggtttacggt cagtacccac ataaattgtg tggtctggtc
    37861 tcaatttatt gacgaagagg attaagtatc tcatggctga atggagcggc gaatatatca
    37921 gcccatacgc tgagcacggc aagaagagtg aacaagtcaa aaagattacg gtttccattc
    37981 ctcttaaggt gttaaaaatc ctcaccgatg aacgcacgcg tcgtcaggtg aacaacctgc
    38041 gtcacgctac caacagcgag ctgctgtgcg aagcgtttct gcatgccttt accgggcaac
    38101 ctttgccgga tgatgccgat ctgcgtaaag agcgcagcga cgaaatcccg gaagcggcaa
    38161 aagagatcat gcgtgagatg gggattaacc cggagacgtg ggaatactaa agcaaaaaag
    38221 agcggcgcgg agtggaatcg cctgatgcgc tacgcttatc aggcctacgt catattgcaa
    38281 tttattgaat ttgcacgaac ttgtaggccg gataaggcgt tcacgccgca tccggcataa
    38341 acaacgagca cgttgtctgc gacccaccgc tttttataca tggacgttta actatgaaaa
    38401 acaggctgct gatcctcagc ctgctggttt ctgtacctgc ctttgcctgg cagccacaaa
    38461 ccggcgacat catctttcag atctctcgct catcgcaaag taaagcgatc caactggcga
    38521 cccattccga ttatagccac accggtatgc tggtgatacg caacaaaaag ccctacgttt
    38581 ttgaagcggt cggcccggtg aaatacaccc cgctcaagca gtggatcgcc catggtgaaa
    38641 agggcaaata cgttgttcgc cgcgttgaag gcggactgag tgttgaacaa cagcaaaaac
    38701 tggcgcaaac ggtaaaacgt tatctcggta aaccgtatga tttcagcttc tcatggagcg
    38761 acgatcgcca gtactgttcg gaagtggtgt ggaaggttta ccagaacgcg ctgggaatgc
    38821 gcgtgggcga gcagcagaag ttgaaagagt tcgatctcag caacccgctg gtccaggcta
    38881 agctcaaaga acgctacggc aaaaatattc cgcttgagga aacggtagtt tcaccacaag
    38941 ccgttttcga cgcgccacaa ctcaccacgg ttgccaaaga gtggccgctg ttttcgtggt
    39001 aatggatgat gaaaaaaata attcccgccg tagtctgttt gttgctttgt agttgcacga
    39061 cctttccgca aactgtcgct ccggtaaacg gtgatgcctc caattagttg aattaaggat
    39121 ataatactcg cttttaaggt tgtttcatgg tcacagttaa ccttcattgc ccccgttgcc
    39181 agtccgttca ggtttaccgt cacgggcaga acccaaaaag acatgatcga ttccgcggcc
    39241 gtgactgtca ccgggtattt cagctcagtt actgttacga gccccgtaaa ccgggagtta
    39301 aagaccaaat cgctgaaatg actttcaacg gtgccggggt tcgcgatact gcccgtacgc
    39361 tgaaaatcgg cattaataca gtcatccgaa ctttaaaaaa ctctcgccac gaagaataac
    39421 gtcatccccg gtcgctcatg ctgatgtggc actcatctgc gaacttagtc agcaatggag
    39481 ctttgtcggc agtaaagcgc gacagcactg gctctggtac gtgtacaaca cgaaaactgg
    39541 tggtgttctg gcctacactt ttggcccccg gactgacgaa acctgtcgtg aattgctggc
    39601 gctgcttacc cttttaccat cggcatgttg accactgacg aatggggtag ttacaccaga
    39661 gagttaccga aggaaaagca tctgactggt aagattttta ctcagcgcat tgagcgcaac
    39721 aatctgaccc tgagaacccg aatcaaacgt ctggcccgca gaaccatctg tttctcgcgc
    39781 tctgtagaac ttcatgaaaa agtcatcggt gcttttatcg aaaatatatg ttctactaat
    39841 tggagtcatc acccttctga tgagctttcc ttggatgatt accagactga atacacagcc
    39901 aaagattttt acctcattct gctctttttt ctcaaatgac atatattata ttttacatca
    39961 tattcatagg catatgacat tcccccgccc ccattatgtc attgtgggtt gatgttgggc
    40021 tttcataaaa aaaacatctt tttttgaact agcattaatt atatttactt tatatattaa
    40081 aatattttct ccatctggaa atattttagc cacacaatat aaagcagctg aatccgaatt
    40141 acttaaaaat atattatcat tacccataac tccagccatt aaattactgg agactaaagc
    40201 aaggaaataa caacattgta ttgccttcat tttaattact cccttgtctg ataattgtaa
    40261 ctccattccc tttagctttg ggattatatt ttagataggt gttatttggt gttcccaagt
    40321 aactacttgt attctttttt tcccattcca ttcatataag aattcgttaa atctttgctt
    40381 gaaaaattta gactatcata aacatcattt tcttttgtta ctttatttcc tttatcgtca
    40441 gagtaaaaac cgtgagtgtg ataatcgcct actctctctg aaccttcagg gcattttata
    40501 tttcgcaagt ctacactatc attatcattt gaacttatcg gattcatggg gaaatattca
    40561 ccttgcttct tacatattag tccaccatat tctttattct cgttaattga ttctccatta
    40621 cacat
//
LOCUS       DADMIB010000014        40428 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.014, whole genome shotgun sequence.
ACCESSION   DADMIB010000014 DADMIB010000000
VERSION     DADMIB010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40428
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.014"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(115..2436)
                     /locus_tag="JNZ89_000771"
     CDS             complement(115..2436)
                     /locus_tag="JNZ89_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HAY8934725.1"
                     /translation="MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFITRYRKEI
                     TGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELED
                     LYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALD
                     GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV
                     PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
                     GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
                     GLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR
                     ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
                     QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
                     VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
                     TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK
                     PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
                     LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ
                     NNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR"
     gene            complement(2533..3045)
                     /gene="greB"
                     /locus_tag="JNZ89_000772"
     CDS             complement(2533..3045)
                     /gene="greB"
                     /locus_tag="JNZ89_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709179.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HAY8934726.1"
                     /translation="MRIIKQTKGINEMKTPLVTREGYEKLKQELNYLWREERPEVTKK
                     VTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAW
                     VEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASW
                     YVNAIEYVKP"
     gene            3237..3956
                     /gene="ompR"
                     /locus_tag="JNZ89_000773"
     CDS             3237..3956
                     /gene="ompR"
                     /locus_tag="JNZ89_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018150685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator OmpR"
                     /protein_id="HAY8934727.1"
                     /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
                     TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
                     IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
                     LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
                     PRYIQTVWGLGYVFVPDGSKA"
     gene            3953..5305
                     /gene="envZ"
                     /locus_tag="JNZ89_000774"
     CDS             3953..5305
                     /gene="envZ"
                     /locus_tag="JNZ89_000774"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     EnvZ"
                     /protein_id="HAY8934728.1"
                     /translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
                     QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
                     QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
                     FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
                     AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
                     CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
                     LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR
                     GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
                     "
     gene            complement(5381..7003)
                     /gene="pckA"
                     /locus_tag="JNZ89_000775"
     CDS             complement(5381..7003)
                     /gene="pckA"
                     /locus_tag="JNZ89_000775"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HAY8934729.1"
                     /translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY
                     ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
                     QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
                     AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
                     MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
                     GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
                     SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
                     GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
                     SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE
                     KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL"
     gene            7382..9106
                     /locus_tag="JNZ89_000776"
     CDS             7382..9106
                     /locus_tag="JNZ89_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HAY8934730.1"
                     /translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGV
                     PATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWD
                     FGCYLLLMAMLLLPWIQQSLRIRNCSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLL
                     LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA
                     TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
                     PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGY
                     FVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
                     TPDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKV
                     LAENVLIAPGSVKPDVTFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF
                     NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRDLTVDGE
                     TLEINLSK"
     gene            complement(9241..10119)
                     /gene="hslO"
                     /locus_tag="JNZ89_000777"
     CDS             complement(9241..10119)
                     /gene="hslO"
                     /locus_tag="JNZ89_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417860.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HAY8934731.1"
                     /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
                     LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA
                     DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
                     VDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
                     TVYDPQDVEFKCTCSREHCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
                     IAEIRNNASPADPQVH"
     gene            complement(10144..10545)
                     /gene="hslR"
                     /locus_tag="JNZ89_000778"
     CDS             complement(10144..10545)
                     /gene="hslR"
                     /locus_tag="JNZ89_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HAY8934732.1"
                     /translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
                     PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMAMAR
                     KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
     gene            complement(10556..11224)
                     /gene="yrfG"
                     /locus_tag="JNZ89_000779"
     CDS             complement(10556..11224)
                     /gene="yrfG"
                     /locus_tag="JNZ89_000779"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HAY8934733.1"
                     /translation="MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNG
                     VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL
                     EALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
                     ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLI
                     PSLM"
     gene            complement(11289..13424)
                     /gene="igaA"
                     /locus_tag="JNZ89_000780"
     CDS             complement(11289..13424)
                     /gene="igaA"
                     /locus_tag="JNZ89_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator protein IgaA"
                     /protein_id="HAY8934734.1"
                     /translation="MSTIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRK
                     LTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIST
                     DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
                     GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF
                     CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE
                     QINNISLGIIDLVYPAHWQPYIAQDLDQQTDIDIYLDCHVVRQGRYLSLHDEVKNFPL
                     QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV
                     GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATAL
                     TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK
                     NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA
                     AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNA
                     EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR
                     HRTRMMEIQAYYESCLNPQLITPSESLIE"
     gene            13744..14304
                     /gene="nudE"
                     /locus_tag="JNZ89_000781"
     CDS             13744..14304
                     /gene="nudE"
                     /locus_tag="JNZ89_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HAY8934735.1"
                     /translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
                     TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
                     GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE
                     DPDFNEARNVSALFLVREWLKGQGRV"
     gene            complement(14469..17021)
                     /gene="mrcA"
                     /locus_tag="JNZ89_000782"
     CDS             complement(14469..17021)
                     /gene="mrcA"
                     /locus_tag="JNZ89_000782"
                     /EC_number="2.4.1.129"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312265.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase/peptidoglycan
                     DD-transpeptidase MrcA"
                     /protein_id="HAY8934736.1"
                     /translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
                     QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
                     RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL
                     ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
                     VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
                     GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
                     KITDTLKALPTYGPLLPAAVTSANPQGATAMLADGSTVALSMEGVRWARPYRSDTQQG
                     PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
                     SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
                     PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
                     SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
                     QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
                     IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
                     IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
                     IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
     gene            17141..17920
                     /gene="hofM"
                     /locus_tag="JNZ89_000783"
     CDS             17141..17920
                     /gene="hofM"
                     /locus_tag="JNZ89_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofM"
                     /protein_id="HAY8934737.1"
                     /translation="MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII
                     KDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL
                     SGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
                     ASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALFVDPDS
                     VAICGEGGFDPWEAVSVRQPLLPPPGGDFAIALGLALGKAY"
     gene            17920..18459
                     /locus_tag="JNZ89_000784"
     CDS             17920..18459
                     /locus_tag="JNZ89_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HAY8934738.1"
                     /translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
                     SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLRKQRSQRQRQRQFTRDWQSALEAL
                     AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
                     GRWQFEYQLTRKVSDEHVL"
     gene            18443..18883
                     /gene="hofO"
                     /locus_tag="JNZ89_000785"
     CDS             18443..18883
                     /gene="hofO"
                     /locus_tag="JNZ89_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofO"
                     /protein_id="HAY8934739.1"
                     /translation="MNMFFDWWFATSPRLRQFCWAFWLLMLVTLIFLSSTHHEERDAL
                     IRLRASHHQQWATLYRLVDTTPFSEEKTLPFSPLDFQLPGAQLVSWHPSAQGGELALK
                     TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG"
     gene            18873..19277
                     /gene="hofP"
                     /locus_tag="JNZ89_000786"
     CDS             18873..19277
                     /gene="hofP"
                     /locus_tag="JNZ89_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofP"
                     /protein_id="HAY8934740.1"
                     /translation="MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMV
                     GRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQ
                     GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG"
     gene            19189..20427
                     /gene="hofQ"
                     /locus_tag="JNZ89_000787"
     CDS             19189..20427
                     /gene="hofQ"
                     /locus_tag="JNZ89_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA uptake porin HofQ"
                     /protein_id="HAY8934741.1"
                     /translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
                     KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIA
                     RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN
                     KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
                     LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
                     QGSEIPYQVSSGESGATSVEFKEAVLGIEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
                     DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
                     KEYERRELVVFITPRLVSSE"
     gene            20828..21349
                     /gene="aroK"
                     /locus_tag="JNZ89_000788"
     CDS             20828..21349
                     /gene="aroK"
                     /locus_tag="JNZ89_000788"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004709337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HAY8934742.1"
                     /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
                     ADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
                     LETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAK
                     VVANQIIHMLESN"
     gene            21406..22494
                     /gene="aroB"
                     /locus_tag="JNZ89_000789"
     CDS             21406..22494
                     /gene="aroB"
                     /locus_tag="JNZ89_000789"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HAY8934743.1"
                     /translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET
                     LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
                     GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
                     IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
                     RTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLIL
                     PLAIGKSEVRSGVSHELVLNAIADCQSA"
     gene            22586..23872
                     /gene="damX"
                     /locus_tag="JNZ89_000790"
     CDS             22586..23872
                     /gene="damX"
                     /locus_tag="JNZ89_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DamX"
                     /protein_id="HAY8934744.1"
                     /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI
                     ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQ
                     YMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGDKSIDLAGNATDQANGVQPAPG
                     TTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVA
                     VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEP
                     KPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTA
                     GNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGV
                     YASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
     gene            23979..24815
                     /gene="dam"
                     /locus_tag="JNZ89_000791"
     CDS             23979..24815
                     /gene="dam"
                     /locus_tag="JNZ89_000791"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HAY8934745.1"
                     /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
                     TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
                     DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
                     YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
                     RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
                     KK"
     gene            24833..25510
                     /gene="rpe"
                     /locus_tag="JNZ89_000792"
     CDS             24833..25510
                     /gene="rpe"
                     /locus_tag="JNZ89_000792"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HAY8934746.1"
                     /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
                     NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
                     LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
                     VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
                     LAKVSHE"
     gene            25503..26261
                     /gene="gph"
                     /locus_tag="JNZ89_000793"
     CDS             25503..26261
                     /gene="gph"
                     /locus_tag="JNZ89_000793"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HAY8934747.1"
                     /translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
                     RVITWIGNGADVLMERALAWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
                     SEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
                     DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
                     AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
     gene            26254..27258
                     /gene="trpS"
                     /locus_tag="JNZ89_000794"
     CDS             26254..27258
                     /gene="trpS"
                     /locus_tag="JNZ89_000794"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HAY8934748.1"
                     /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
                     HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
                     ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
                     AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
                     KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
                     VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP
                     "
     gene            27527..28432
                     /locus_tag="JNZ89_000795"
     CDS             27527..28432
                     /locus_tag="JNZ89_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709156.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934749.1"
                     /translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVG
                     LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEG
                     LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE
                     LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESL
                     QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
                     RAVVDKHALLAHQQRVVSGEQEPSY"
     gene            28449..28811
                     /locus_tag="JNZ89_000796"
     CDS             28449..28811
                     /locus_tag="JNZ89_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417841.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HAY8934750.1"
                     /translation="METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTM
                     AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE
                     GYLLANLYGLWMAANEEV"
     gene            28895..30058
                     /locus_tag="JNZ89_000797"
     CDS             28895..30058
                     /locus_tag="JNZ89_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfX family PLP-dependent enzyme"
                     /protein_id="HAY8934751.1"
                     /translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKR
                     LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLSVAHQ
                     GHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLY
                     PGQESGFVQHSLHEVVAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQAR
                     DQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQSERIA
                     MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL
                     SLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPKIVGRYDSLGNSLGA"
     gene            30058..31284
                     /locus_tag="JNZ89_000798"
     CDS             30058..31284
                     /locus_tag="JNZ89_000798"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HAY8934752.1"
                     /translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ
                     LPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM
                     PFCDVIDRVEQALVSAGWQVERRGDELQFLWVNQAVAIGDNLEADLGQVYNITANLSV
                     ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYD
                     NGFQVVHMGYGVDKKVQVPQKLYEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMD
                     ITLDEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVDAMQPDDCLV
                     VMADHGNDPTIGHSHHTREVVPLLVYQQGLAATQLGVRTTLSDVGATVCEFFRAPPPQ
                     NGRSFLSSLRFAGDTL"
     gene            31281..32159
                     /locus_tag="JNZ89_000799"
     CDS             31281..32159
                     /locus_tag="JNZ89_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase-related protein"
                     /protein_id="HAY8934753.1"
                     /translation="MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM
                     TRGVRNVIEMTNRYMGRNAQFMLGVMRETGINVVACTGYYQDAFFPEHVVTRSVQELA
                     QEMVDEIEQGIDGTELKAGLIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTS
                     FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP
                     DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ
                     ADVDVMLRETPSQFFQ"
     gene            32170..32523
                     /locus_tag="JNZ89_000800"
     CDS             32170..32523
                     /locus_tag="JNZ89_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2620 domain-containing protein"
                     /protein_id="HAY8934754.1"
                     /translation="MKKIGVAGLQREQIKKTIEATAPGSFEVFIHNDMEAAMKVKSGQ
                     LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV
                     EHVEHAIPMLINHLK"
     gene            32535..33839
                     /locus_tag="JNZ89_000801"
     CDS             32535..33839
                     /locus_tag="JNZ89_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934755.1"
                     /translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYM
                     NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA
                     IWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLV
                     AAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF
                     EERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN
                     QAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISA
                     EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV
                     AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA"
     gene            33851..34936
                     /locus_tag="JNZ89_000802"
     CDS             33851..34936
                     /locus_tag="JNZ89_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HAY8934756.1"
                     /translation="MKTFPLQSLTLIEAQQKQFALVDTICRHFPGAEFLTSGDLGLTP
                     GLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYP
                     TTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
                     RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRA
                     TLYSGGSQIQGAQALEVLRCLVFAPVMHAVQAGVSERLLALLNGGEVPEVKSAVIANA
                     QSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQSE
                     HCAIRINPNRSGEETVLRILRESIASI"
     gene            complement(35088..35819)
                     /gene="phoB"
                     /locus_tag="JNZ89_000803"
     CDS             complement(35088..35819)
                     /gene="phoB"
                     /locus_tag="JNZ89_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417834.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PhoB"
                     /protein_id="HAY8934757.1"
                     /translation="MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQ
                     YNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATK
                     EKVIEQERVSAAPFCKKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEI
                     YVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQN
                     DKPVHVSELFCRANRITLTIDNKRH"
     gene            complement(35919..36704)
                     /gene="frlD"
                     /locus_tag="JNZ89_000804"
     CDS             complement(35919..36704)
                     /gene="frlD"
                     /locus_tag="JNZ89_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-kinase"
                     /protein_id="HAY8934758.1"
                     /translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI
                     TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF
                     ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL
                     DFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID
                     TMGAGDSFIAGFLCGWSAGMTLPQAMAQGTACAAKTIQYHGAW"
     gene            complement(36701..37531)
                     /gene="frlC"
                     /locus_tag="JNZ89_000805"
     CDS             complement(36701..37531)
                     /gene="frlC"
                     /locus_tag="JNZ89_000805"
                     /EC_number="5.1.3.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 3-epimerase"
                     /protein_id="HAY8934759.1"
                     /translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL
                     KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEM
                     NAGYTLISAAHAGYLTPPNVIWGRLAENLSELYEYAENIGMDLILEPLTPYESNIVCN
                     ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH
                     YIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER
                     "
     gene            complement(37581..38603)
                     /gene="frlB"
                     /locus_tag="JNZ89_000806"
     CDS             complement(37581..38603)
                     /gene="frlB"
                     /locus_tag="JNZ89_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-phosphate deglycase"
                     /protein_id="HAY8934760.1"
                     /translation="MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDI
                     DRIYFVACGSPLNAAQAAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDY
                     GKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVV
                     LEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGP
                     LRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTER
                     AINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYY
                     GGLVEY"
     gene            complement(38624..40012)
                     /gene="frlA"
                     /locus_tag="JNZ89_000807"
     CDS             complement(38624..40012)
                     /gene="frlA"
                     /locus_tag="JNZ89_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001324580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine/psicoselysine transporter"
                     /protein_id="HAY8934761.1"
                     /translation="MTANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSG
                     IFVSVGEVAKAAGTPWLTVLTFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS
                     RPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHL
                     RSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGI
                     SATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKL
                     ANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFF
                     KCFGHVHPKYNTPDVSIILQGALGLFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWC
                     RKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAF
                     WAKRSRQLNALS"
     gene            complement(40257..40424)
                     /locus_tag="JNZ89_000808"
     CDS             complement(40257..40424)
                     /locus_tag="JNZ89_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfL family protein"
                     /protein_id="HAY8934762.1"
                     /translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS
                     KIIGGCGPTAQ"
BASE COUNT         9346 a        10255 c        11118 g         9709 t
ORIGIN      
        1 tgtggaataa aaaggccgga gatattctcc ggcactttta tgtcaggcaa ggcgttcgtt
       61 gccagatgcg gcgtgaacgc cttatcgcgc aggtttaggg gccagtccgg gcgtttaacg
      121 ttttttgccc attgccgccg ccagcgcatc catcatcgcg ctattaccgg caggctgcgc
      181 ttcacgaccg cgtggtttgg ctgccgggcg gttgttttgc gggcgttcat taccgccgcc
      241 gcgacgggcg ttggtttcgc caggctgctc gtccagacgc atagtcaggg cgatacgttt
      301 acgctgaaga tccacttcca gcactttcac cttcacaatg tcgcccgctt tcaccacggt
      361 atgcggatct tccacaaact tgttcgacaa tgaagagatg tgaaccaggc cgtcctgatg
      421 cacgccgata tcgacaaacg cgccaaagtt ggtgacgttg gtcaccgcac cttcgaggat
      481 catacccggt tgcaggtcgt tcattgtctc gacgccatcg gcaaactgag cggttttaaa
      541 ttccggacgc ggatcgcgac ccggtttttc cagctctttg atgatgtcag ttactgtcgg
      601 cacaccgaat ttttcatcag taaagtcaga cgctttcagg ttacgcagtt cgctgctgtt
      661 acccatcaga tctttcagtg cctgctgtgt tgctgccaga atgcgttcca ccaccggata
      721 ggcttccggg tggacggtag aagcatccag cgggttatca ccgtggttaa tgcgcaagaa
      781 gcccgcgcac tgctcgaagg ctttcggccc cagacggctg actttcagca gttgctgacg
      841 gttctggaac tggccgttct catcgcgcca ggccacgatg ttttgcgcca tcatgcgcgt
      901 caggcccgcc acgcgggtta acagcggaac agaagcagtg ttgagatcga cgccaacggc
      961 gtttacgcag tcttctacta ctgcgtccag tttgcgggcc agttgcgtct ggctgacgtc
     1021 atgctgatac tgacctacgc cgatagattt cggatcgatt ttcaccagct ccgccagcgg
     1081 atcctgcaaa cggcgggcga tagacaccgc gccacgcagc gaaacgtcga gatccgggaa
     1141 ctcctgcgct gccagctcgg aagctgagta aaccgacgcg ccagcttcgc tgacgatcac
     1201 tttctgtgcg gtcactttcg ggaactgctt ctgcacgtcg agatagaaac gttcagtttc
     1261 gcgggaagct gtaccgttgc cgatcgccac cagttcaacg ttatgttttt cacacaaggc
     1321 agcaacggtc atcgctgctt ttgcggcttg tccggtgtgc gggtaaatgg tatcggtcgc
     1381 taccagtttg ccagtggcat cgaccaccgc cacttttacc ccagtacgca gacccggatc
     1441 gaggcccatc gttgcacgca gtccggcagg ggccgccatc agcagatcgt gcaggttacg
     1501 ggcaaagacg ttgattgctt catcttccgc gcgttcgcgc acggtaccca tcagttcggt
     1561 ttccagatgc atcagcacct tgatgcgcca ggtccagctc actacgcctt tgcgccagct
     1621 atccgccggg gcattgttca ggcgcaggcc aaggtgatcc atgatgattt gctcgcaata
     1681 gctctctttg ggcggctcat cgaactgcgg atcggcattc agcgaaagct ggagtacgcc
     1741 ttcgttacgc ccacggaaca tcgccagagc gcggtgagaa ggcaccgtgg acaacggttc
     1801 gtgatgatcg aaatagtcgc ggaatttcgc cccttcctct tctttaccgc tcaccaccgt
     1861 agaaaccaaa tgcgcgttct tccacagata atcacgcact ttcgccagca gcgcggcatc
     1921 ttcggcaaac cgttccatca ggatatagcg cgcgccatcc agcgcggctt tggtatctgc
     1981 cacgccttta tcggcatcaa catattgtgc agcggcgact tctggcgtgt gtgacggatc
     2041 gctccacagc aggtcagcca acggctcaag ccctgcttca atggcgattt gcccgcgggt
     2101 gcggcgttta ggtttgtagg gcaggtagag gtcttcgagt tcggttttgc ttagggtggc
     2161 gttgatggcc ttcgccagat catcggtgag tttgccttgc tcggaaatgg acttgaggat
     2221 cgcctgacgt ctctcttcca gctcgcgcag atagctcaga cgcgtttcca gattacgcag
     2281 ctgcgtgtca tccagaccgc cggtgatttc cttacgataa cgtgtgataa acggcacggt
     2341 attcccttcg tcaagcaggc gaacggcagc gtcaacctgt tccgggcgcg cctgaatttc
     2401 acccgcaata atgcggcaga acgaatcatt catcatggtt tgagttcatc ttttcggatc
     2461 aaaaatcagg ggatagttat acggactggc tggcaaaaat gccagccatc ggcaggaggt
     2521 taagactctt ccttacggtt tcacgtactc gatagcatta acataccagc tcgcttcccc
     2581 ggcaggggta ttcaccaccg ccagatcgcc gacttctttt ttcagcaatg cgcgggccat
     2641 cggggaatcg atagagatgt aatctttacg gccaaaaatt tcatcgtagc cgacaatacg
     2701 gaaacggtga gtcacgccat cgtcgttttc aatctccacc cacgcgccaa aaaagacttt
     2761 gccttcctgc tgaggggagt aatcgacgat tttgagattt tccatgcatt tagtgagata
     2821 gcgcacgcga cggtcgattt cacgcagacg ctttttatta tactgatagt cagcattttc
     2881 gctgcggtcg cccagacttg cggcccaggt cacctttttt gtgacctccg ggcgttcttc
     2941 acgccagaga taattaagct cttgtttgag tttttcatac ccttcccggg taaccagggg
     3001 cgttttcatc tcgttgattc cctttgtctg tttgataatg cgcacattgg gtataacgtg
     3061 atcatatcaa cagaatcaat aatgtttcgc cgaataaatt gtatacttaa gctgctgttt
     3121 aatatgcttt gtaacaattt aggctgaaat tcataccaga tttagctggt gacgaacgtg
     3181 agctttttta agaatacacg cttacaaatt gttgcgaacc tttgggagta caaacaatgc
     3241 aagagaacta caagattctg gtggtcgatg acgacatgcg cctgcgtgcg ctgctggaac
     3301 gttatctcac cgaacaaggc ttccaggttc gaagcgtcgc taatgcagaa cagatggatc
     3361 gcctgctgac tcgtgaatct ttccatctta tggtactgga tttaatgtta cctggtgaag
     3421 atggcttgtc gatttgccga cgtcttcgta gtcagagcaa cccgatgccg atcattatgg
     3481 tgacggcgaa aggggaagaa gtggaccgta tcgtaggcct ggagattggc gctgacgact
     3541 acattccaaa accgtttaac ccgcgtgaac tgctggcccg tattcgtgcg gtgctgcgtc
     3601 gtcaggcgaa cgaactgcca ggcgcaccgt cacaggaaga ggcggtaatt gctttcggta
     3661 agttcaaact taacctcggt acgcgcgaaa tgttccgcga agatgagccg atgccgctca
     3721 ccagcggtga gtttgcggta ctgaaggcac tggtcagcca tccgcgtgag ccgctctccc
     3781 gcgataagct gatgaacctt gcccgtggtc gtgaatattc cgcaatggaa cgctccatcg
     3841 acgtgcagat ttcgcgtctg cgccgcatgg tagaagaaga tccagcgcat ccgcgttaca
     3901 ttcagaccgt ttggggcctg ggctacgtct ttgtaccgga cggctctaaa gcatgaggcg
     3961 attgcgcttc tcgccacgaa gttcatttgc ccgtacgtta ttgctcatcg tcaccttgct
     4021 gttcgccagc ctggtgacga cttatctggt ggtgctgaac ttcgcgattt tgccgagcct
     4081 ccagcagttt aataaagtcc tcgcgtacga agtgcgtatg ttgatgaccg acaaactgca
     4141 actggaggac ggcacgcagt tggttgtgcc tcccgctttc cgtcgggaga tctaccgtga
     4201 gctggggatc tctctctact ccaacgaggc tgccgaagag gcaggtctgc gttgggcgca
     4261 acactatgaa ttcttaagcc atcagatggc acagcaactg ggcggcccga cggaagtgcg
     4321 cgttgaggtc aacaaaagtt cgcctgtcgt ctggctgaaa acctggctgt cgcccaatat
     4381 ctgggtacgc gtgccgctga ccgaaattca tcagggcgat ttctctccgc tgttccgcta
     4441 tacgctggcg attatgctat tggcgatagg cggggcgtgg ctgtttattc gtatccagaa
     4501 ccgaccgttg gtcgatctcg aacatgctgc tttgcaggtc ggtaaaggga ttattccacc
     4561 gccgctgcgt gaatatggcg cgtccgaggt acgttcggtt acccgcgcct ttaaccatat
     4621 ggcggctggt gttaagcaac tggcggatga ccgcacgctg ctgatggcgg gggtaagtca
     4681 tgacttacgc acgccgctga cgcgtattcg cctggcgacc gagatgatga gcgaacagga
     4741 tggctacctg gccgaatcga tcaataaaga tatcgaagag tgcaacgcca tcattgagca
     4801 gtttatcgac tacctgcgca ccgggcagga gatgccgatg gaaatggcgg atctcaacgc
     4861 agtactcggt gaggttattg ctgccgaaag tggctatgag cgggaaattg aaaccgcgct
     4921 ttaccccggc agcattgaag tgaaaatgca cccgctgtcg atcaaacgcg cggtggcgaa
     4981 tatggtggtc aacgccgccc gttacggcaa tggctggatc aaagtcagca gcgggacgga
     5041 gccgaatcgc gcctggttcc aggtggaaga tgacggtccg ggaattgcgc cggaacaacg
     5101 taagcacctg ttccagccgt ttgtccgcgg cgacagtgca cgcaccatta gcggcacggg
     5161 attagggctg gcaattgtgc agcgtatcgt ggataaccat aacgggatgc tggagcttgg
     5221 caccagcgag cggggcgggc tttccattcg cgcctggctg ccagtgccgg taacgcgggc
     5281 gcagggcacg acaaaagaag ggtaaataaa cgggaggcga aggtgcctcc cgttttgctt
     5341 tctataagat actggataga tattctccag cttcaaatca ttacagtttc ggaccagccg
     5401 ctaccagcgc ggcacccgca ggggtgtcgg tgtatttatc gaagttgtcg ataaacagtt
     5461 tcgccagggt ttcggctttt tcctgccact gttccggaga agcgtaggtg ttacgcggat
     5521 cgagaatctt cgtgtctacg cccggcagtt cggttgggat cgccaggtta aacatcggca
     5581 gagtgaaggt ttctgcatta tccagcgaac cgttgaggat ggcgtcgata atggcgcggg
     5641 tatctttaat cgagatacgt ttgcctgtgc cgttccagcc agtgttaacc agataagcct
     5701 gcgcgcccgc cgcctgcata cgtttcacca gcacttctgc gtactgagtc gggtgcagcg
     5761 acaggaatgc cgcgccgaag caagcggaga aggttggcgt cggttcggtg atgccacgct
     5821 cagtaccggc cagtttggcg gtgaagccag agaggaagtg atactgggtt tgatcggcag
     5881 tcaggcgaga aaccggcggc aacacgccga aagcatcagc agtcaggaag ataaccttag
     5941 tcgcgtggcc cgctttggaa accggcttaa cgatgttatc gatgtgatag attggataag
     6001 aaacgcgggt gttctcggtt tttgaaccat catcaaagtc gatagtgcca tcttcacgca
     6061 cggtgacgtt ttccagcagc gcatcacgac ggatagcgtt gtagatttca ggttccgctt
     6121 ctttcgacag cttgatagtt tttgcgtagc agccgccttc gaaattaaac acgccgtcat
     6181 cgtcccagcc gtgttcgtca tcgccaatca ggcggcgttt cgggtcggtg gaaagggtgg
     6241 ttttaccggt gccggaaagg ccgaagaaca ccgcaacatc gcctttctcg ccaacgttgg
     6301 cggagcagtg catagaagcg atacctttca gcggcagcag gtagttcatc atcgagaaca
     6361 tccctttctt catttcgccg ccgtaccagg tgccgccaat cagctgcatg cgctcggtca
     6421 ggttaaacgc cacgaagttt tcggagttca gaccctgttc tttccactgc gggttagtgc
     6481 acttcgcgcc gttcataacg ataaagtctg gtttgaaacc tgccagctct tcatcgctcg
     6541 ggcgaataaa catgtttttg acaaaatgcg cctgccaggc cacttcggtg atgaaacgga
     6601 cggaaagacg agtatccggg ttcgcaccac agaaagcgtc gacaacgaac agacgtttgc
     6661 cggaaagctg cctggtcacc aggcctttca gatgctgcca ggtttccgga gagagaggtt
     6721 tgttgtcgtt cttacctttg cctttgtctg cccaccagaa agtatcgcga gtggtatcgt
     6781 cacggacgat atacttatct tttggtgaac gaccggtgaa gatcccggta tcgacggcaa
     6841 cggcacccag attagttaac accccgcgct cataacctgt caggctcgga tcgagctctt
     6901 cctgatacag caggtcgtag cttgggttgt aaacgatatc atgtacgtca ctgataccat
     6961 aagcctcgag ttcttgcggg gtcaaaccat tgttaacgcg catttcactg ctccttagcc
     7021 aatatgtatt gcctgaatag taaagtcttt ttgggggtgt taaccgcgac aaggctcata
     7081 gatttacgta tctggagaaa ttcatatttg acaaaaaacc ccgtgattcc tgttacgaaa
     7141 cggttgctat tatcgcagaa atagcatttt aggtgtggaa aatgttctca aaaggttaaa
     7201 tcttggttta tatggcggga atattgtgag tggaatcgca ttccttaatg aaattgatgc
     7261 aaattcaatc ggtaaagtat cgattcacca cgctaacttt ttttgattat tttctgaaaa
     7321 aagcaaaata ctactgcccg gatgcgataa ttaacccacc ttttgattct ggataaccaa
     7381 catggataac gttgaacttt caccggcaac acgctggggg atgattgcta ccggattact
     7441 tcaggggctg gtttgctacc tgttgatcgc ctggcttgcc ggaaaaaatc acagttggat
     7501 tgtttatggc gtgcctgcga ccgttgcgtt ttcatccgtt ttactcttct ccgtgatctc
     7561 ttttaaacag aagcgccttt ggggatggct ggcgctggtg tttattgcca cgacagggat
     7621 gagcggttgg ctgaagtggc aaactgatgg catgaacccc tggagagctg aaaaggcgat
     7681 ttgggatttt ggctgctatc tgctgttgat ggcaatgttg ttgctaccgt ggatacaaca
     7741 aagccttcgt atccgcaatt gcagtagccg ctatagctac ttttaccagt cagtatggca
     7801 taacgtactt atattactgg tgatttttct cgccaatggc ctgacgtggc tggtgctttt
     7861 actgtggggt gagttgttta aacttgttgg catcaagttt ttcaatacgc tcttttttgc
     7921 aaccgactgg tttatgtatc ttacattagg tctggttacc gcactggcgg tgattctcgc
     7981 gcgcacacag tcacgtttaa tcgactctat tcaaaagttg ttcacgttaa tcgccacggg
     8041 gttgctgccg ttagtatcat tgctaaccct gatgtttatc atcactctgc cgtttacggg
     8101 cctgagcgcg atttctcgcc acatctccgc cgccgggttg ctgttaacgc tggccttttt
     8161 gcaattgatc ttaatggcta ttgtccgcga tccgcaaaaa gcgtcacttc cctggacggg
     8221 gccgttgcgt tgcctgatta aaaccgcttt gctggttgct ccgctgtatg tgttcgtcgc
     8281 cgcctgggcg ttatggctgc gggtcgctca gtacggctgg actgtcgacc gcttgcaggg
     8341 cgcgctggcg gtgctggtgt tactggtgtg gtcgctgggg tattttgtca gtatcgtctg
     8401 gcgtaatggg caaaatcccc ttgttcttca gggcaaagtg aaccttgcgg tttcgttatt
     8461 ggtgttggtg atactggtgc ttcttaattc gccggtgctg gacagtatgc gtattagcgt
     8521 gaacagtcat atggcgcgtt atcagagcgg caaaaacacg ccagaccagg taactatcta
     8581 catgctcgaa cagagcggtc gctatggacg tgcggcgctt gagtcgctga aaagcgatgc
     8641 cgggtttatg aaagacccga aacgcgcgcg ggatctgctg atggcgttag atggagagca
     8701 acatcttcag gaacaggtat cggaaaaagt attagccgaa aatgtgttaa ttgcccctgg
     8761 ttctgttaaa ccggatgtga cattctggtc ggccttaatc caggatcgct ataacgtgat
     8821 gacctgtatt gaaaaagacg cctgcgtcct ggtcgagcaa gatctgaata gtgatggtca
     8881 ggcggagcgg atcctgtttg cttttaatga tgacagagtc attgtctatg gctttgactc
     8941 agacagaaaa gaatgggacg cgcttgatat gagtttactt ccgaacgaaa taacgaaaga
     9001 aaaattactc acagctgcga aggatggaaa actggggacg aggccgaaag cgtggcgcga
     9061 tctgacggta gatggtgaaa cgctggaaat aaacttaagt aagtgacaac gcttttatcg
     9121 gatacgacgc tgtatctgac caaaataatt tgcgatttat ttcataggcg ctggtaagcg
     9181 cagcacatca ggccattaag ttgtaaaatc cggcagagcc ctctctgccg gacatactca
     9241 ttaatgaact tgcggatctg ccggagacgc gttgttgcgg atttcagcaa tatccatcgc
     9301 attgaacaga tagtggttac cgcagtaatc acaatgcatg tcaatttcgc catcttccgc
     9361 caggatgcta tcaacttctt catcaggcag cgttttcagc gcatcggcgc aatgttcacg
     9421 cgagcaggtg catttgaact ccacatcctg cggatcgtaa accgtcacct cttcttcgtg
     9481 atacaaacgc cacaacactt cgtttgccgg taaggtcagc agttcttcgg ttttgatggt
     9541 ttcggttagc gtcgccaggt ggtcaaagtc gtcctgctgg gcattttgcg caggcattac
     9601 ctgcaacaac ataccgcctg cagccggttt gccgtctacg tcgccggtgc gaataaacag
     9661 gcgcgtcggc agctgttcag aacgcataaa gtaatcttcc aggcaggccg ccagggtatc
     9721 accttccaga ccaactacgc cctgatagcg ttcgccttcg ctcggggtaa tggtgatcac
     9781 cacgtaacca ttgccgacca gcgttttcag gtcggcattt tctggaattt cgccctgcac
     9841 gcgcgccaca ccgcgcattt gctggttatt gttaccgtta ataaccgcca gattcatcgg
     9901 accgtcgccc tgcagctgta cggtgatatc accatcaaac ttcagcgtag cggttaacag
     9961 gctggtcgca accagcagtt ctgccagcac gtttttaacg ggctgcggat aatcgtggtt
    10021 ctcaaggatc tgttgcaggg tttccgaaac ggttaccagt tcgccgcgaa cggcaaaatt
    10081 ttcaaacaga tagcgatgta attggtcatg ttgcggcata atcatctctc ttgcaggtga
    10141 cagttattca ctgtcgccgt gtttaaatcg taacaggtcg cggcgctctt ttttgtccgg
    10201 gcgtcggtcc gggtgcggca tggttaaggc attaagttta cgtgccatcg ccattttttc
    10261 gcgtttctct acactttccg cagtctcttc atacagcaag gctgcctcgc tggcggggcg
    10321 acgctgttca gtaatcgcct ttacaatcac cgtgcgttcg tcatttccct ggcgcagagt
    10381 gagcgtggca ttcagctcga cgattttgct cggcttgctg cgctgcccgt tgtaatgcac
    10441 cttaccgcct tcaatcattt cacgggctag cgcgcgggtt ttataaaaac gggcagccca
    10501 tagccattta tccagtcgaa cctcaacagc aggtttctct ttcatggcgt ctccttcaca
    10561 ttagcgaggg gatcaggcgg cggtagtcat tcagtgacgg atggcgttga tactgtttct
    10621 cggcaatccc ggaatcagga ttagtcacgc cgaggcagta acgaatacca aattgcgcgg
    10681 cagcatcgag aatcgcttcg ctgtcatcaa taaacagcgt tctttcagct ttcagacccg
    10741 tagcttcggc caccgcatgc cataaccgct gatcctcttt cggataacca aatgtgtggg
    10801 tggaaagtaa taaatcaagg tgtgcgtcca gacccgtatg ctcaagtttt accgccaggt
    10861 tgtgcggatg agcattggtg agcaaaattc gctgcttacc gctggctttc agtgcctcaa
    10921 gaaacggaat ggtatcttca cgcagtacgg cgcgcggtcc catctcggtg gtcattgcac
    10981 agatatccag acccagttgc tcactccagt aatcaagaca gtaccagttt agcgtatgct
    11041 gtacgtcgtg atattgctgg cgcatatatt ccatcgcttc ctgtggcgta accccgtttt
    11101 tcgcgcccca tgtttcaggc accagctttt gccagaaata gttatcgaag gcgaggtcga
    11161 gcaacgtgcc gtccatatcc agcagaacgg tatctacgtc ctgccaggca atgttgatat
    11221 gcatgaggga aatctccaga gtgaagcaat ttgcgcgaca gggtagcata acctgtcgcg
    11281 caaacgtgtt attcgataag gctttctgaa ggggtgatca gttgcgggtt caggcagctt
    11341 tcataatagg cctgaatctc catcatgcga gtgcgatgac gctggtaacg acgccaggcc
    11401 tgtacgccat tgtaaatggc gctacccagc atcgtcagta gcagcaatgt ggtgctgaga
    11461 tagcgccaca ggccggaacg atccgggatc ggatgaaggc caatatgctg cgtaccattg
    11521 gcgtcagtga agatttttgt gacgatacct tcggcgttaa acggcgtatg catcagcatt
    11581 tgtgccagtt tctggaaagc gttccactgt tcttgcggcg ggtagtcgta aagtgatgcc
    11641 gaaggccagg gctgatcaac aaaatcgctg ccttcgtcgc tgacaatcag gaatccgccg
    11701 ggggccggac tgtttagtga ttgtgccgct cgcgccgttt catgcgtgat aaacggcgcg
    11761 gtggaggttg ccaccaggtt atccagcgat tccgcactca ccgggcgtaa taacacattc
    11821 acgccatcga gcttcccggc gttggcgcgt tttaccagcg cgtcccagtc tttactgttg
    11881 ccgagattga ccagcgcatt tttcagtcgc acacagtcat ctttggcaga acataaatcc
    11941 gctgtcttca gtacaatgtc gccaaaatca tcaagcaata ccatgccgga tttttgaatc
    12001 gctgaacgta atgaggcact gacgcgagat tcatcttccg gtttagggtg cagctggcga
    12061 ttaactgctt cagtcaatgc cgtcgctttg ttgaccagtt cagattctgg taatggtaat
    12121 gagcgggcgt cattccagat gatctgcgag cagtcaaacg gtaaaaaagg tgaattggtt
    12181 ttcgcgctcc aggttccgga agtgcgaata ttacacattc ccgtaccgct aatacgcaat
    12241 gtatcgccta cccgcacgcc agcgtcagcc agttgtttta cgctggtggc ttcaatggtc
    12301 tgcgcgcctt tcatccatga gagagtgaat ttcagcggca tatccagcgg gatccagaat
    12361 aacagcataa acagcaccag cagcgagccc gcagcgataa tcgtactgcg cagccagtgc
    12421 tgtaacggaa agttttttac ttcatcatgc agcgaaagat atcgcccctg acgcactacg
    12481 tggcagtcga gatagatatc aatatcggtt tgttgatcga gatcctgagc aatgtatggc
    12541 tgccagtgtg cgggatagac caggtcgata ataccgagtg aaatattgtt gatctgttcc
    12601 tgatcgtttt cgccaaacaa tccccaacga cggggtgtac cgcgcagaca atgaatttcc
    12661 cgcagggagg attttgccgg gggcgcgaat agcccccaca gacctgcgcc cagcagcagt
    12721 aatgcgccgc ctgccagcca cggaacaaat acatccgggg taatcaggca gaaaaagaac
    12781 atcaggaagg aggcgacgat cagcaacgct tcacgcagcc cgcgcggacg actcagcgca
    12841 tattcttcat gcgtttcttt gcgaatattg agtagctcga tttgctcact ctcttccccg
    12901 cgaatcgacg cctgcgtgga cggaacaggt tgcaaggcat agccgcgcgt ttcctgcatg
    12961 tactcctgta gcgtatgacc gttgagtgaa ataaccaacg gcagcgaatc ggtatgaatc
    13021 agttcaacgg tattctcatc gttgatgtac tgttcccaga aggggggcag gtggacttct
    13081 accgaatcga ggtagtaacg ccatttattc ggatcgtcgg tagagatgcc gtaacgtgtg
    13141 atagcgtgtg tcagcatcat gacgttgttg ctttcggcat tcagcgccag agagatcggt
    13201 gccgcgctag ctcccgttgg gccaggcacc tgtaatacct gcgtcaggct ctcaagataa
    13261 ttttcaacgg cgctacgttc ttcaggtgtg agtttacgcg tttgcgcatc cgcgaaggcg
    13321 ttggtccagg gcagctgact ccgtctggat cgcactttta tcagccatcc cgcaagtagt
    13381 gagcaggcca gcaaagcagc taaaaaaatc acaatggtgc tcatgctttc cccatcttac
    13441 ttagtctgtc aggcgtggtc agtcgcacca gacacaatac atgattctgc ggttggctat
    13501 cggcaagcgt ggagtttaac ttgagcatca ttaagcacat cacagtaacc gctgatcata
    13561 gcaaaccctc tgaaggcgga atatcagcaa attcctagag ttatttcaac ctattgactt
    13621 ttaatttgat ttgaggacga ttatttatta agttacataa atgtaaataa catgcaattc
    13681 acattgccga aagcgtgtcc gatatcgcac aataaccgct gatttcacag catagatccc
    13741 acgatgagca aatcattaca aaaacccacc attctgaatg ttgaaactgt agcccgttcc
    13801 cgactgttta ccgtcgagag cgtggatctg gagttcagca atggcgtgcg gcgtgtttat
    13861 gaacgaatgc gtccaaccaa ccgggaagca gtgatgattg tgccgattgt ggacgatcac
    13921 ctgatcctga tccgcgaata cgcagtggga actgaatcct acgaattagg tttttcgaaa
    13981 ggattaattg atccgggtga aagcgtctac gaagccgcta accgcgagct aaaagaagag
    14041 gttggatttg gtgcgaacga tctgactttt ttgaagaagc tcagcatggc accgtcttac
    14101 ttttccagca aaatgaatat cgtggtcgcg caagatctct acccggaatc gctggaaggc
    14161 gatgagccag agccgctacc acaggtgcgc tggccgctgg cgcatatgat ggatttgctg
    14221 gaagaccctg acttcaacga agcgcgtaat gtcagcgcgc tgttcctcgt gcgcgaatgg
    14281 ttgaaagggc aggggcgagt gtaaatgcgt gaagtttgcc tgatgcacaa cgcttatcag
    14341 gcttatgggg ttcctgcaat atattgattt ttcacgattt tgttagccgg gtaacgcggt
    14401 cacccgcatc cagcataaac aaatgcactt tgtcagccaa ctgaaaaggc gccgaagcgc
    14461 ctttttaatc agaacaattc ctgtgcctca ccattatcga taatggtcgt tcccacctcg
    14521 tgcaccgcct gttgtgtcgg ctgcgtacct tcgatgaaat actcttcgcg gctgttgcca
    14581 ccattagcta actgcccggt gctgcgatcg atattcaccg tcacaatacc cggtggcggc
    14641 gtcagcggct gctccggcac accttcaaga acggctttca tataagcgtc ccatgcaggc
    14701 tgggcactct tggctccgcc ttcgtaacct gagatctgat ctttaatcgc tccggaagcc
    14761 gttgtatgac cgagattacg acggtgatca tcaaagccaa tccagaccga ggtcacaacg
    14821 cccggaccgt aacccgagaa ccacgcatct ttcgaactgt tagtggtacc ggttttcccg
    14881 ccgatatcgc gacgctgcaa atcacgacct gcacgccagc cagtaccctg ccagcctggc
    14941 tcaccaaaga tattggtgtt caaagcactc ttaatcagga atgccagcgg agtgttgatg
    15001 acgtgcggtg cgtactcctg cgcgccagtc ttcgccacta acgcctgatt tgcctgctcc
    15061 agctgcggca ttggtacaga aacattctgc tgctcgcggg agatagcgac atcttcaaca
    15121 tcgttatttt ccagcacgtt cgatttctgc gtatcaccgt aaatcaccgg aatatcgcat
    15181 tccgggcagg ctactttcgg tttcgcttcg aaaatcacgc cgccctgatc gttttcaatt
    15241 ttgctgataa accacgggtc caccaggaag ccgccgttcg ccatgaccgc gtagccgcgc
    15301 gccacctgca ttggggtgaa ggacgctgaa cccagcgcca gcgattcggt gtggacaatg
    15361 ttttgcgccg ggaagccgaa gcgttgcaga tattctgcag cgtagtcgac gcccatagcc
    15421 cgcattgcac gtaccatcac cacgtttttc gactgaccca gcccctgacg taagcgaatt
    15481 ggaccagcat attgtggcgg cgagtttttc ggctgccagt cagaaccggc acctgcgtcc
    15541 cagcgagaaa ttggcacatc gttcaacata cttgccagcg tcagaccttt atccatcgcc
    15601 gcggtgtaga ggaacggttt gatgttggaa cccacctgac gcagtgcctg ggtggcgcgg
    15661 ttaaacttgc tctgattgaa atcaaagcca ccgaccagcg ccataacggc accgttttgc
    15721 ggattgatcg acaccagcgc cgagttcact tccggcactt gtgccagcca ccatgcatcg
    15781 ccaacctgac gaacccagat ttgctgaccc gtttgcagaa catcggtcac tttacgcggc
    15841 gtcggtccct gctgagtatc cgaacggtaa ggacgcgccc agcgaacgcc ttccatactc
    15901 aatgcgacgg tcgacccgtc cgccagcatc gccgtcgctc cctgaggatt ggcgctggtg
    15961 actgcggcag gcagcagcgg accataggtc ggcagcgcct tcagcgtatc ggtaatcttg
    16021 ttgttatccc acgccgactc gcccactttc cacagcacat ttgccgggcc gcgatagccg
    16081 tggcgcatgt cgtagtccag cacgttatta cgtaccgcct gctgtgcggc ctgctgcact
    16141 ttgcgggtga tggtggtgta aatgcgataa ccgtcttcat aggcactttc gccataacgg
    16201 ttatacatct cctggcgcac catttcgctc aggtacggcg cagagaaagc aatctccggc
    16261 gcgtgatagt tagcgttaat cgcctcagtg cgtgtctgat cgaactgttg ttgggtgata
    16321 tacccttcat ccagcatccg cgacagtacg acgttacgcc gcgcgacggc acgatccatt
    16381 gagtagagcg gattaaaggt ggaaggcgct ttcggcagcc cggctatcac agccatttcg
    16441 ttcagcgtca gttggtcgac cgttttaccg aaatagactt gtgccgcagc accgacacca
    16501 taggcgcggt aaccgaggta aatcttattc agataaagct cgaggatctc gtctttcgtc
    16561 agcaactgtt caatgcgaat cgcgaggaag acttccttaa tcttacgcat cagcgtgcgt
    16621 tctggactga ggaagaagtt tctcgccagc tgctgggtaa tggtactcgc cccttgtgac
    16681 gcgtggccgg agaacagcgc cacacttgcc gcacggaaga tccccaccgg gtcaacgccg
    16741 tgatgctcgt agaagcggct gtcttccgtc gcgataaagg ctttcaccat ctccggcggg
    16801 atttgatcca acgtaaccgg aatacgacgt ttctcaccgt attgagcaat cagctcgcca
    16861 tcggcgctgt aaatctgcat cggaatttgc aggcgaacat cttttaatgt cgccacatcc
    16921 ggcagttgtg gctcgatgta gcggtatagg ccataaatcg agcctgctcc cagcagaatg
    16981 caacagactg caaggatcaa aaaatacttt acgaacttca ctggaaattt cccatttagt
    17041 ttcatttggg cagtttataa acaaacgcgc gttagtataa aggcaagcca gacgcattga
    17101 tatacccgtc agagtgacgg gtgataagga gatcatcaca atggcattta agatctggca
    17161 aattggtttg catttacaac agcaagaagc ggtagcggtt gcgatcgtgc ggggcgcaaa
    17221 agaatgcttt ttgcaacgct ggtggcggtt gccgctggag aacgacatta tcaaagatgg
    17281 gcggattgtt gatgcgcagc agctggctaa aacgttgtta ccttggagtc gcgaactgcc
    17341 gcagcgtcat cacattatgt tggcgtttcc cgccagtcgc acattacagc ggtcatttcc
    17401 gcgcccgtcg atgtcccttg gtgagcggga gcaaacggcc tggctgtcag ggacgatggc
    17461 ccgcgagctg gatatggatc cggactccct gcgcttcgat tacagcgaag actcactcag
    17521 tcccgcctat aacgtgactg ccgcgcaaag caaagagctg gcaacgctgc ttactctggc
    17581 agaaaggttg cgtgttcatg ttagtgcgat caccccggat gccagtgcat tacagcgatt
    17641 cctgcctttt ttaccttctc atcagcaatg tctggcctgg cgtgataacg aacagtggct
    17701 gtgggcgacg cgctatagct gggggcgcaa actggcggtg gggatgacta gcgcgaagga
    17761 gctggcggca gcgttattcg ttgatcccga cagcgtcgcg atatgtggcg aaggcggatt
    17821 tgacccctgg gaggccgttt ctgttcgtca gccgctgcta ccgccgcctg gtggagactt
    17881 tgccatcgcg ctggggctgg cgcttgggaa ggcgtactga tgaacccgcc aattaatttt
    17941 ttgccctggc gacagcaacg ccggaccgct tttctgcgtt tctggttgct gatgttcgtt
    18001 gcgcctctgc tgctggccgt cgggataacg ctaatactgc gtctgacagg cagcgccgaa
    18061 gcgcgcatag acgcagtttt gcttcaggcg gaacaacaac tcgcccgcag cttacagata
    18121 acgaagccac gtttgctgga gcaacagcag ttacgcaaac agcgttcgca acggcagcgc
    18181 cagcgacaat ttacccgcga ctggcaatct gcgctggaag cactggcggc gcttttaccc
    18241 gagcacgcct ggctgacaac gataagctgg cagcagggaa cgctggagat caaggggctg
    18301 acaacaagca ttaccgcgtt aaacgcacta gaaacgtcac tccgccagga tgcgtctttt
    18361 catctcaatc agcggggagc cacgcagcag gatgcgcagg gacgctggca atttgagtat
    18421 cagttaacaa ggaaggttag cgatgaacat gttctttgac tggtggttcg ccacatcacc
    18481 ccgcctccgc cagttttgct gggcattctg gttgctgatg ttagttacgc tcatttttct
    18541 gtcatcgaca caccatgaag agcgcgacgc attaattcga ttacgggcaa gtcatcacca
    18601 gcagtgggcc acactgtatc gcctggttga caccactccc ttcagcgaag aaaaaacgct
    18661 gcccttttcg ccactggatt ttcagttgcc cggcgcgcaa ctggtttcct ggcatccatc
    18721 cgcgcaggga ggtgagttgg cgttgaaaac gctgtgggaa gcagtgccgt cggcattcac
    18781 acggctggca gagcgcaacg tcagcgtgag ccgtttttcg ttaagcgtgg aaggtgatga
    18841 tcttttgttc acgctacaac tggagacgcc gcatgagggt taaacgctgg ttgttggcag
    18901 gtattgcatt gtgcctttta accggtatgc gtgacccttt taaaccgccg gaagatctat
    18961 gccggattag cgaacttagc cagtggcgct atcaggggat ggtagggcga ggcgagcgca
    19021 tcatcggtgt aataaaagac gggcaaaaga aatggcgacg ggtgcagcaa aacgatgtgc
    19081 tggaaaacgg ctggacaatt ttacagctga cgccagacgt actaacgctg ggtaccggga
    19141 caaactgcga accgccacaa tggttgtggc aacggcaagg agatacaaat gaagcaatgg
    19201 atagccgcac tactgttgat gctgataccc ggcgtacagg cggcaaagcc gcaaaaagtg
    19261 acgctgatgg tggatgacgt tccggtagct caggtgttgc aggcgctggc tgaacaggag
    19321 aagttgaacc tggtcgtgtc gccagacgtc agcggtacgg tgtcgttaca tctaacagat
    19381 gttccctgga agcaggcact acaaactgta gtgaaaagcg ccggactgat aacgcggcag
    19441 gaaggcaaca ttctctcagt gcattccatt gcctggcaga ataacaatat cgcccgccag
    19501 gaggcggagc aggcgcgggc gcaggcaaat ctgccgctgg aaaatcgcag tataaccctg
    19561 caatacgccg acgcgggaga actggcgaaa gcgggggaga agctactgag tgccaaaggg
    19621 agtatgaccg tcgataaacg caccaatcgc cttttgctac gagataacaa aacggcgtta
    19681 agcgcgcttg aacagtgggt agcgcaaatg gatctgccgg tcgggcaggt tgagctgtcg
    19741 gcgcatattg tcaccattaa tgaaaaaagt ttgcgtgagt taggcgtgaa atggacgctg
    19801 gccgatgcgc aacacgctgg tggcgttggg caagtcacca cgcttggtag cgacctctcc
    19861 gtagcgacgg cgacaacgca tgtcggtttt aacattgggc gcatcaacgg acgcttgctg
    19921 gatcttgagc tttccgcgct cgaacaaaaa cagcagctgg atattatcgc cagtccgcgt
    19981 ctgctggcct cacatcttca gcctgccagc attaaacagg ggagcgaaat tccatatcag
    20041 gtttccagcg gggaaagtgg cgcgacgtcg gtggaattta aagaggccgt cctggggata
    20101 gaggtcacgc ccacggtgtt acaaaaaggt cgcatccggc tgaaattaca catcagccag
    20161 aacgttccgg ggcaggtgct acagcaggcc gatggcgaag tgctggcgat tgataagcag
    20221 gagatcgaaa cgcaggtcga ggtcaaaagc ggagaaacgt tggcgctggg cggcattttt
    20281 acccgtaaaa ataaatcggg tcaggatagc gtaccgttgc ttggcgacat tccctggttc
    20341 gggcaattat ttcgtcatga cggaaaagaa tatgaacgac gcgagttagt ggtgtttatc
    20401 acgccacgac tggtttccag tgagtaaaca gccgtaaaag cggtaatgtt tttatgctga
    20461 acgtgtttca tctatttgac gcgcgcaggt atttagcata caaggagtac cgatttgaga
    20521 gttggcgctc ttcgctgcct gcgttccatg atgatgattt atcattcagg cggcattttg
    20581 ctgtcttttt tacgctaatc ttacccggtg atttatcgcc agagcggtgg tagcaaggca
    20641 gcgcgcttgc agcgaccaga tatgcagagg gatgggtgat ttattcagtt gccaaacccg
    20701 ctggagtatt gagataattt tcagtctgac tctcgcaata tcttatgagg tttcagttca
    20761 tgtcctgcgg cgctctctga gcgaagcggg tttatcatta acgaatagtc ttagtagtac
    20821 cgaaaaaatg gcagagaaac gcaatatctt tctggttggg cctatgggtg ccggaaaaag
    20881 cactattggg cgccagttag ctcaacaact caatatggaa ttttacgatt ccgatcaaga
    20941 gattgagaaa cgaaccggag ctgatgtggg ctgggttttc gatttagaag gcgaagaagg
    21001 cttccgcgat cgcgaagaaa aggtcatcaa tgagttgacc gagaaacagg gtattgtgct
    21061 ggctactggc ggcggctctg tgaaatcccg tgaaacgcgt aaccgtcttt ccgctcgtgg
    21121 cgttgtcgtt tatcttgaaa cgaccatcga aaagcaactt gcacgcacgc agcgtgataa
    21181 aaaacgcccg ttgctgcacg ttgaaacacc gccgcgtgaa gttctggaag cgttggccaa
    21241 tgaacgcaat ccgctgtatg aagagattgc cgacgtgacc attcgtactg atgatcaaag
    21301 cgctaaagtg gttgcaaacc agattattca catgctggaa agcaactaat tctggcttta
    21361 tatacactcg tctgcgggta cagtaattaa ggtggatgtc gcgttatgga gaggattgtc
    21421 gttactctcg gggaacgtag ttacccaatt accatcgcat ctggtttgtt taatgaacca
    21481 gcttcattct taccgctgaa atcgggcgag caggtcatgt tggtcaccaa cgaaaccctg
    21541 gctcctctgt atctcgataa ggtccgcggc gtacttgaac aggcgggtgt taacgtcgat
    21601 agcgttatcc tccctgacgg cgagcagtat aaaagcctgg ctgtactcga taccgtcttt
    21661 acggcgttgt tacaaaagcc gcatggtcgc gatactacgc tggtggcgct tggcggcggc
    21721 gtagtgggcg atctgaccgg cttcgcggcg gcgagttatc agcgcggtgt tcgtttcatt
    21781 caagtcccga cgacgttact gtcgcaggtc gattcctccg ttggcggcaa aactgcggtc
    21841 aaccatcccc tcggtaaaaa catgattggc gcgttctacc agcctgcttc agtggtggtg
    21901 gatctcgact gtctgaaaac gcttcccccg cgtgagttag cgtcggggct ggcagaagtc
    21961 atcaaatacg gcattattct tgacggtgcg ttttttaact ggctggaaga gaatctggat
    22021 gcgttgttgc gtctggacgg tccggcaatg gcgtactgta ttcgccgttg ttgtgaactg
    22081 aaggcagaag ttgtcgccgc cgacgagcgc gaaaccgggt tacgtgcttt actgaatctg
    22141 ggacacacct ttggtcatgc cattgaagct gaaatggggt atggcaattg gttacatggt
    22201 gaagcggtcg ctgcgggtat ggtgatggcg gcgcggacgt cggaacgtct cgggcagttt
    22261 agttctgccg aaacgcagcg tattataacc ctgctcaagc gggctgggtt accggtcaat
    22321 gggccgcgcg aaatgtccgc gcaggcgtat ttaccgcata tgctgcgtga caagaaagtc
    22381 cttgcgggag agatacgctt aattcttccg ttggcaattg gtaagagtga agttcgcagc
    22441 ggcgtttcgc acgagcttgt tcttaacgcc attgccgatt gtcaatcagc gtaacaacaa
    22501 gaaaggtcag gccgcttatc aagcggtcta ttagcttcag gttaattgca acgtggtaag
    22561 cattaacctt ttagtggggt gttaaatgga tgaattcaaa ccagaagacg agctgaaacc
    22621 cgatcccagc gatcgtcgta ctggtcgttc tcgtcaatct tctgaacgtt ctgagcgtac
    22681 tgaacgtggc gaaccgcaga tcaattttga tgatattgaa cttgatgaca ctgacgatcg
    22741 ccgtccgact cgtgcgcaaa aagagcgcaa tgaggaaccg gaaatcgaag aagaaattga
    22801 cgaatccgaa gatgaaaccg tggatgaaga gcgcgtagag cgtcgtccgc gtaagcgcaa
    22861 aaaagcagcc agtaaacccg cttctcgtca gtatatgatg atgggcgtcg gcattctggt
    22921 tctactgctg ttgatcatcg gtatcggttc tgcgctaaaa gccccctcga cctcttccag
    22981 cgatcaaacc gcgtctggcg ataagagtat tgatcttgca ggcaatgcga ccgatcaggc
    23041 gaatggggtg cagccagcgc cgggaaccac gtctgcggaa aatactcagc aggatgtttc
    23101 tctgccaccg atctcttcta cgccgactca agggcaaacc ccggcggcaa cggatggtca
    23161 acaacgtgtt gaagtgcagg gtgacctgaa caatgcgctg actcagccac aaaatcagca
    23221 acagttgaac aatgtggcgg tcaattccac attgccgacc gaacccgcga ctgtcgcgcc
    23281 tgttcgcaat ggcaatgcat cgcgtgacac ggcgaaaacg caaaccgctg aacgtccgtc
    23341 cactacgcgc ccagctcgtc agcaggcggt gattgaaccg aaaaaaccgc aagcaaccgt
    23401 gaaaacggag ccgaagccgg tagcacagac gccgaagcgt actgaaccag ctgcccctgt
    23461 ggcgagcacg aaggcaccgg ctgcgacttc tacgccagca ccaaaagaga cggcgactac
    23521 ggctccagta cagacggcat ccccggcgca aaccacggca acaccagccg ctggagggaa
    23581 gaccgcaggt aatgttggtt cgttgaaatc ggcaccgtcc agccattaca ctctgcagct
    23641 gagcagttcc tctaactacg acaacctgaa cggttgggcg aagaaagaga atctgaaaaa
    23701 ctacgttgtc tatgaaacga cgcgtaatgg tcagccgtgg tatgtcctgg tttctggcgt
    23761 gtacgcttcg aaagaagagg cgaaaaaagc ggtatctaca ttgccagcag atgttcaggc
    23821 caaaaacccg tgggcgaaac cgctgcgtca ggtacaggcc gatctgaagt aatcaaggtt
    23881 atctcccgca atggtttatc gttgcgggag ctgcctgaag cgctggatgc tgtcggagct
    23941 ttctccacag ccggagaagg tgtaattagt tagtcagcat gaagaaaaat cgcgcttttt
    24001 tgaagtgggc agggggcaag tatcccctgc ttgatgatat taaacggcat ttgcccaagg
    24061 gcgaatgtct ggttgagcct tttgtaggtg ccgggtcggt gtttctcaac accgactttt
    24121 ctcgttatat ccttgccgat atcaatagcg acctgatcag tctctataac attgtgaaga
    24181 tgcgtactga tgagtacgta caggccgcac gcgagctgtt tgttcccgaa acaaattgcg
    24241 ccgaggttta ctatcagttc cgcgaagagt tcaacaaaag ccaggatccg ttccgtcggg
    24301 cggtactgtt tttatatttg aaccgctacg gttacaacgg cctgtgtcgt tacaatctgc
    24361 gcggtgagtt taacgtgccg tttggccgct acaaaaaacc ctatttcccg gaagcagagt
    24421 tgtatcactt cgctgaaaaa gcgcagaatg cctttttcta ttgtgagtct tacgccgata
    24481 gcatggcgcg cgcagatgat gcatccgtcg tctattgcga tccgccttat gcaccgctgt
    24541 ctgcgaccgc caactttacg gcgtatcaca caaacagttt tacgcttgaa caacaagcgc
    24601 atctggcgga gatcgccgaa ggtctggttg agcgccatat tccagtgctg atctccaatc
    24661 acgatacgat gttaacgcgt gagtggtatc agcgcgcaaa attgcatgtc gtcaaagttc
    24721 gacgcagtat aagcagcaac ggcggcacac gtaaaaaggt ggacgaactg ctggctttgt
    24781 acaaaccagg agtcgtttca cccgcgaaaa aataattctc aaggagaagc ggatgaaaca
    24841 gtatttgatt gccccctcaa ttctgtcggc tgattttgcc cgcctgggtg aagataccgc
    24901 aaaagccctg gcagctggcg ctgatgtcgt gcattttgac gtcatggata accactatgt
    24961 tcccaatctg acgattgggc caatggtgct gaaatccttg cgtaactatg gcattaccgc
    25021 ccctatcgat gtacatctga tggtgaaacc cgtcgatcgc attgtgcctg atttcgctgc
    25081 cgctggtgcc agcatcatta cctttcatcc agaagcctcc gagcatgttg accgcacgct
    25141 gcaactgatt aaagaaaatg gctgtaaagc gggtctggta tttaacccgg cgacacctct
    25201 gagctatctg gattacgtga tggataagct ggatgtgatc ctgctgatgt ctgttaaccc
    25261 aggttttggc ggtcagtcgt tcattccaca aacactggat aaactgcgcg aagtacgtcg
    25321 tcgtatcgac gagtctggtt ttgacattcg actggaagtg gacggtggcg tgaaggtgaa
    25381 caacattggc gaaatcgctg cggcgggcgc ggatatgttc gtcgccggtt cggcaatctt
    25441 cgaccagcca gactacaaaa aagtcattga tgaaatgcgc agtgaactgg caaaggtaag
    25501 tcatgaataa gtttgaagat attcgcggcg tcgcttttga tctcgacggt acgctggttg
    25561 acagtgctcc cggtcttgct gctgcggtag atatggcgct gtatgcgctg gagttacccg
    25621 tcgcaggtga agaacgcgtt attacctgga ttggtaacgg cgcagatgtt ctgatggagc
    25681 gtgcattggc ctgggcgcgt caggaacgtg cgactctgcg taaaacaatg ggtaaaccgc
    25741 ccgttgatga cgacattccg gctgaagaac aggtacgtat tctgcgtaaa ctgttcgatc
    25801 gctactatag cgaggttgcc gaagagggga cgtttttgtt cccgcacgtt gccgatacgt
    25861 tgggcgcgtt gcaggctaaa ggcctgccgc taggcctggt caccaacaaa ccgacgccgt
    25921 tcgtcgcgcc actgctcgaa gccttagata ttgccaaata ctttagcgtg gttatcggcg
    25981 gcgatgatgt gcaaaacaaa aaaccgcatc cggacccgct gttactggtg gctgagcgga
    26041 tgggaattgc cccacaacag atgctgtttg tcggcgactc acgcaatgat attcaggcgg
    26101 caaaagcggc aggttgccca tcagttggct taacctacgg atataactac ggcgaggcta
    26161 tcgatctcag ccagcctgat gtaatttatc agtctataaa tgaccttctg cccgcattag
    26221 ggcttccgca tagcgaaaat caggaatcga aaaatgacta agcccatcgt ttttagtggc
    26281 gcacagccct caggtgaatt gaccattggt aactacatgg gtgcgctgcg tcagtgggta
    26341 aacatgcagg atgactacca ttgcatttac tgtatcgttg accaacacgc gatcaccgtg
    26401 cgccaggatg cacagaagct gcgtaaagcg acgctggata cgctggcctt gtatctggct
    26461 tgtggtatcg atcctgagaa aagcaccatt tttgttcagt cccacgtacc agaacatgcg
    26521 cagttaggct gggcactgaa ctgctatacc tacttcggcg aactgagccg catgacccag
    26581 tttaaagata aatctgcgcg ttatgccgag aacatcaacg ctggtctgtt tgactatccg
    26641 gtgctgatgg ctgcggacat cctgctgtat caaactaatc tggtaccggt gggtgaagac
    26701 cagaaacagc acctggaact gagtcgcgat atcgcccagc gtttcaacgc gctgtatggc
    26761 gagatcttta aggtgccgga gccgtttatt ccgaaatctg gcgcgcgcgt aatgtcgctg
    26821 ctggagccga ccaagaagat gtccaagtct gacgataacc gcaataacgt tatcggcctg
    26881 ctggaagatc cgaaatcggt agtgaagaaa atcaaacgcg cggtcactga ctccgacgag
    26941 ccgccggtag ttcgctacga tgtgcagaac aaagcgggcg tttccaacct gctggatatc
    27001 ctttctgcgg taacgggcca gagcatccca gaactggaaa aacagttcga aggcaagatg
    27061 tatggccatc tgaaaggtga agtggctgat gccgtttccg gtatgctgac tgaattgcag
    27121 gaacgctatc accgtttccg caacgatgaa gccttcctgc aacaggtgat gaaagacggc
    27181 gcagaaaaag ccagtgtaca cgcttcccgt acgctgaaag cggtgtacga agcgattggt
    27241 tttgtggcga agccgtaata tcaaaacgct cggacggtcc cctcgcccct ttggggagag
    27301 ggttagggtg aggggagcag gcaagcgcca gtgggaatta ccctttgctc gcattgtcga
    27361 ataaatcact tcgtcatcac tctgaaaccg gggaaacccg gtttttttat cctcatttgc
    27421 aataatccga aaaaatgtga agcgcctcgc cgtttccaca tctcacagtt gccacttatc
    27481 ttcattttaa tgaagatata aacattcatt ttattgaaaa tatattatgc gtcgaacgtt
    27541 tatcaaaaaa gaaggcgtcg tcatcacgac gctggcccgt tatttgttgg gtgaaaaatg
    27601 cggtaatcga ctgaaaacca tagatgagct ggcaactgaa tgccgttcat cggttggcct
    27661 gacgcaggcc gcgttgaaaa cgttggaatc aagtggagcg atacggattg aacgccgtgg
    27721 gcgcaatggc agttatctgg tcgaaatgga taacaaagcg ctgctgagtc atgtggatat
    27781 caataacgtt gtgtgtgcca tgcctttgcc ctatacccgc ttgtacgaag gtttagcaag
    27841 cgggctgaaa gcccagtttg atggcattcc tttttattat gcgcatatgc gtggcgcgga
    27901 tattcgtgtg gagtgtttgc ttaacggtgt ctatgacatg gcagtagttt cccgcctggc
    27961 ggcggaaagt tatctcagcc aaaacaattt gtgcatcgcc ctcgagcttg gcccgcatac
    28021 gtatgttggt gaacatcaac tgatatgccg caaaggtgag tctggaaatg ttaagcgagt
    28081 aggtctcgat agtcgttcgg cggatcagaa aatcatgacc gatgtctttt ttggcgatag
    28141 tgatgtggaa cgtgtcgatc tctcttatca cgagagttta caacgcattg ttaaaggcga
    28201 tgtcgatgcg gttatctgga acgtggtggc ggaaaacgaa ctgaccatgc tgggattaga
    28261 ggcgacgccg ctcacagacg atccgcgatt tttacaggcc accgaagccg tggtcctgac
    28321 gcgagtcgat gattacccaa tgcaacaact gctgcgtgcc gttgtagata aacacgccct
    28381 gctcgcccat caacaacggg tagtgagtgg ggaacaggaa ccgagttatt aaacgaaagg
    28441 catctgatat ggaaaccaga ctcaacctgc tttgcgaggc aggcgttatt gataaggaca
    28501 tctgcaaagg catgatgcag gtcgtcaacg tactggaaac agagtgccat ctgccggtgc
    28561 gcagtgagca aggaacgatg gcgatgacac atatggcgag tgcactgatg cgcagtcgcc
    28621 gtggtgaaga aatagagccg ctggataacg aattgctggc agagctggcg caatccagcc
    28681 actggcaagc cgttgtgcaa ttgcatcagg tgttgttgaa ggaattcgca ctggaagtta
    28741 atccgtgtga agaaggctat ttgctggcca acctttatgg attatggatg gctgctaacg
    28801 aagaggtttg aagctcccga caaatccacg tcgcacaacc taaatattca aaaaaatgaa
    28861 tatttaattc aaggaacaga aacgaggcaa caagatgttt gtagaagcat tgaaacgcca
    28921 gaacccggcg ctgatttccg ccgcactaag tttgtggcag cagggcaaga tcgccccgga
    28981 cagctgggtg atcgacgtgg atcaggtact ggaaaacggt aagcgactga ttgagacggc
    29041 gcggctttac ggcattgaac tgtatctgat gaccaagcag tttggccgta acccatggct
    29101 ggcggaaaaa ttgctggcat taggttacag cggcattgtg gcggtggatt acaaagaggc
    29161 gcgagtcatg cgccgcgctg gtttgtcggt ggcgcatcag gggcatctgg tacaaatccc
    29221 ttgtcatcag gttgctgacg ccgttgaaca gggcaccgac gtcatcaccg tgtttactct
    29281 cgacaaagcg cgggaagttt ctgcggcagc ggtgaaggcc ggacgtgtgc agtttgtgct
    29341 gctcaaagtt tatagcgacg atgattttct ttatccgggg caggagagcg gttttgtaca
    29401 gcattcgctg cacgaggtgg ttgctgaaat taagaaactg ccgggtctgc atttagccgg
    29461 acttacccat ttcccttgcc tgctttggga tgaggctgcc ggaaaagttt tgccgacacc
    29521 gaatcttcac acgctgatac aggcacggga tcaactggcg aaatctggta ttgcacttga
    29581 gcaactgaac gcgccttcag cgaccagctg cacttcgctg ccattactgg cgcaatacgg
    29641 tgtgactcat gccgaacccg gtcatgcgct gacgggcact attccggcaa accagcaggg
    29701 cgatcagtct gaacgtatcg cgatgctctg gttgagtgaa atctcccatc atttccgtgg
    29761 cgacagctac tgctacggcg gcggttacta ccgtcgtggt catgcgcaac atgcgttggt
    29821 gtttacgcca gaaaatcaaa agattactga aaccaatctc aaaactgtgg atgacagcag
    29881 tatcgactac accctgtcgc tggcaggcga gtttccggta agcagtgcag tggtgctctg
    29941 tttccgcacg cagatttttg tcacccgtag cgatgtggtg ctggtgtccg gtattcaccg
    30001 tggcgaaccg aaaatcgttg gtcgttatga cagtcttgga aactctctgg gggcgtaatg
    30061 gcgcgatttg tggtgttagt gattgatagc tttggcgtag gggcaatgaa agatgtcacg
    30121 ctggtgcgtc cgcaagatgc gggagcgaat acatgtggtc acatcctgag ccagttgccg
    30181 catttgcagc taccaacgct ggagaagctg gggctaatca acgcattggg ttatgcgcca
    30241 ggcgatatgc agccgtcaga ttccgcaacc tggggcgtgg cagagctgca acatgaaggt
    30301 ggcgatacct ttatggggca tcaggaaatt ttaggcacgc gcccgttacc gccgctgcgg
    30361 atgccttttt gcgatgtgat tgaccgtgtt gagcaggcat tagtatccgc cggttggcag
    30421 gtggagcgcc gtggcgatga actgcaattt ctgtgggtca atcaggcggt tgcgattggc
    30481 gataatctcg aggcggattt aggccaagtc tataacatta ccgccaatct ctctgtgatc
    30541 tcttttgacg acgcaatcaa aattggtcgt atcgtgcgtg agcaggtaca ggtcggtcgg
    30601 gtcattacat ttggtggcct gttaaccgac agtcaacgca ttctcgatgc cgcagaaagc
    30661 aaagaagggc gctttattgg tatcaatgcg ccgcgttctg gcgcttatga caacggcttc
    30721 caggtcgtgc atatgggcta cggtgtcgat aaaaaagtgc aggtgccgca aaaactgtat
    30781 gaggcgggcg tgccaaccgt gctggtgggt aaggtggcag atatcgtcag caatccttat
    30841 ggcgtgagct ggcaaaacct ggtggatagc cagcggatta tggatatcac cctcgacgaa
    30901 tttaacaccc atccgacggc gtttatttgc accaatatcc aggaaaccga cctcgctggt
    30961 catgcagaag acgtcgcacg ttatgccgaa cgtttgcagg tcgttgaccg taaccttgcc
    31021 cggcttgttg atgcgatgca gccagatgat tgcctggtcg tgatggcgga tcacggcaac
    31081 gatccgacca ttggtcacag ccaccatacc cgcgaagtgg tgccgctgct ggtttatcag
    31141 caaggcctgg ctgctacgca gctcggtgtg cgcaccacgc tttctgatgt gggagctacc
    31201 gtgtgtgaat ttttccgtgc gccaccgcca caaaatggtc gctcttttct ttcctccctc
    31261 cggtttgcag gagacaccct atgagttttg atccgacggg ttacaccctg gcccatgagc
    31321 atctgcatat tgatctctcc ggctttaaaa acaacgtgga ctgccgcctt gatcagtatg
    31381 cgttcatttg ccaggagatg aacgacctga tgacccgggg tgtacgtaat gtgattgaga
    31441 tgaccaaccg ttacatgggg cgcaatgcgc aatttatgct cggtgtaatg cgcgaaaccg
    31501 ggatcaacgt ggtggcctgt actggttatt accaggatgc gtttttcccg gaacatgtgg
    31561 tgacccgcag cgtgcaggaa ctggcgcagg agatggtcga tgaaattgaa cagggtatcg
    31621 atggcacgga gctgaaagcc gggctcatcg cggagatcgg ctccagcgaa ggaaagatta
    31681 cgccgctgga agagaaggta tttattgccg ctgcgctggc gcataaccag accggacgcc
    31741 cgatctccac gcatacgtcg ttcagcacca tggggctgga acaactggct ctgttgcaag
    31801 cccacggagt tgatctttcg cgcgtcaccg ttggtcactg cgatctgaaa gacaacctcg
    31861 acaacatttt gaagatgatc gatctcggcg cgtacgtgca gttcgacacc attggtaaga
    31921 acagttacta cccggacgaa aagcgcattg cgatgctcca cgcgctacgt gaccgtgggt
    31981 tgctgaaccg cgtcatgctg tcgatggata ttacgcgccg ctcccattta aaagccaatg
    32041 gtggttatgg ctatgactat ttattgacca cctttattcc gcaattgcgc cagtcaggat
    32101 tcagtcaggc cgatgtggat gtgatgttac gtgaaactcc ctctcaattt ttccaataag
    32161 gacagactca tgaaaaagat tggcgttgca ggcttacagc gtgagcagat taaaaaaacc
    32221 attgaagcga cggctcctgg cagttttgaa gttttcattc acaacgacat ggaagcggca
    32281 atgaaagtga aatccgggca actggattac tacatcggtg cgtgtaatac cggtgcgggc
    32341 gcggcattgt cgattgccat cgcggtgatt ggctataaca aaagttgcac cattgccaaa
    32401 ccaggcatta aagcgaaaga cgagcatatc gccaaaatga tcgctgaagg aaaagtggcg
    32461 tttggccttt ccgttgagca cgtcgaacac gcgattccga tgctgattaa ccatctgaaa
    32521 taaaaggcac gactatggat ctgtatattc agattatcgt ggtggcgtgc ctgacgggta
    32581 tgacatcgct tctggcgcat cgctcggcgg ctgtttttca tgacggcatc cgcccgatcc
    32641 tgccgcaact gattgaaggc tatatgaacc gtcgcgaggc ggggagtatc gcttttggtc
    32701 tgagcattgg ttttgtggcc tcggtgggga tctcttttac cctgaaaacc gggctgctca
    32761 acgcatggtt actctttctt cctaccgata tcctcggcgt actggcgata aacagcctga
    32821 tggcgtttgg tcttggcgct atctggggcg tgttgatcct tacttgcctg ttgccagtaa
    32881 accagctgct gaccgcgctg ccggtggatg tattaggtag cctcggggaa ttaagctcgc
    32941 cggtagtttc tgcttttgca ctgttcccgc tggtggcgat tttctaccag tttggctgga
    33001 agcaaagtct ggtcgccgcc gtggttgttc tgatgacccg tgtggtagtc gtgcgctatt
    33061 tcccacatct taaccctgaa tccatcgaaa tctttattgg catggtgatg ctgctgggga
    33121 tcgcgataac tcacgacctg cgtcatcgtg atgaaaatga tattgatgcc agcgggcttt
    33181 cggtgtttga agaacgcacg tcgcggatta tcaaaaactt accctatatc gccatcgtgg
    33241 gagcattgat tgccgccgtt gccagcatga agattttcgc cggcagtgaa gtgtcgatct
    33301 tcactctgga gaaagcgtac tccgcaggcg taacgccgga acaatcgcaa acgctgatca
    33361 accaggcggc actggcagaa tttatgcgcg ggctgggttt tgtaccgttg attgccacca
    33421 ccgccttagc aacgggtgtg tatgcagttg cgggctttac ctttgtttat gcggtgggct
    33481 atctctcgcc gaatccgatg gttgcagcgg tattaggcgc agtggttatt tcggcggaag
    33541 tcttgctgct tcgttctatc ggcaaatggc tgggacgcta cccgtcggtg cgtaatgcgt
    33601 cggataacat ccgtaacgcc atgaatatgc tgatggaagt ggcgctgctg gtcggttcga
    33661 ttttcgcagc aattaagatg gcgggttata ccggattctc tatcgcggtt gccatttact
    33721 tcctcaacga atccctgggc cgtccggtac agaaaatggc ggcaccggtc gtggcagtaa
    33781 tgatcaccgg tattctgctg aatgttcttt actggcttgg cctgttcgtt ccggcttaag
    33841 gaaggcacct atgaagacgt ttcctctgca aagcctgacg cttattgagg cgcagcaaaa
    33901 gcagtttgcg ctggtggaca cgatttgccg tcactttccc ggcgcggagt ttctaaccag
    33961 cggtgatttg ggcttaacgc cggggctgaa tcaaccgcgt attacccaac gggtggagca
    34021 ggtgctggct gatgcatttc acgcacaggc tgcggcgctg gtgcagggcg cggggactgg
    34081 cgcgattcgc gccgggctgg cagctttgct caaaccgggg cagcgtcttc tggtgcatga
    34141 cgcgcctgtt tacccgacga cacgggttat tattgagcag atggggctga cgcttattac
    34201 tgttgatttc aatgacctgt cggcactgaa gcaggtcgtc gacgagcaac aaccggatgc
    34261 ggcgctggtg cagcatacgc gccagcagcc gcaggacagc tacgtgctgg cagatgtgct
    34321 ggcaacgttg cgcgcggcag gtgttccagc gttaaccgat gacaactatg cggtgatgaa
    34381 ggtggcgcga atcggctgtg aatgcggcgc gaatgtctcg acattttcct gcttcaagct
    34441 atttgggcca gagggtgttg gtgcagtggt cggcgatgct gatgttatca accgtattcg
    34501 cgccacgctt tactccggcg gtagccagat ccagggcgca caggcgctgg aagtattgcg
    34561 ttgtctggtg tttgcgccag tgatgcacgc ggtgcaggca ggggtatctg aacggttgct
    34621 ggctttgctt aacggtggtg aggtgccgga agtgaaaagc gcggtgattg ctaatgcgca
    34681 gtcgaaggtg ttgattgtcg agtttcatca gccgattgcc gccagagtgc tggaagaggc
    34741 gcaaaagcgc ggtgccttgc cttacccggt gggtgcagag tcgaaatatg aaatcccgcc
    34801 gctcttttat cgcctttccg gaacgtttcg ccaggcgaat ccacaatcag aacattgtgc
    34861 gattcgcatt aacccgaatc gcagcggtga agagacggtg ctgcggattt tgcgtgagag
    34921 tattgccagt atttaatgct ggatagcacc gtcaagctaa attccgtact gaacggtccc
    34981 ctcgcccctt tggggagagg gttagggtga ggggaacgta cgggatgtaa aattcaacgc
    35041 gccagcatcg ccggatgcga tgctggcgca tcttatccgg cctacggtta atgtctttta
    35101 ttatcaatag ttaaggtgat gcgattggcg cggcagaaga gttcggagac gtgcaccggt
    35161 ttgtcattct gatcaaaggc gattttgctg atgcgaaaca acggttcgcc cagttcgcat
    35221 ttcagccatt ttgcctgcgg gcgggtggcg gcaaagatat cgatggtctt tttgtcgctg
    35281 accactcgcg tgtcaaaacg ctcctgaaat aactgatagg tggagcttcc ttcgacgtaa
    35341 atctcatcaa agtcaggata acgcgacagc gggatccatg aactatcaat aaacagcggc
    35401 tctttatcga gatacatcac ccggcagaga tggaacactt cgctgtttcc ggggatgttc
    35461 agctttttgc aaaacggcgc ggcgctgacc cgttcctgtt cgatcacttt ctctttcgtc
    35521 gccttgcctt gtgagacgcc aaaatcggta aaaccactga cagtaagcag ggcgttttca
    35581 actttctggc tttgtacaaa ggtgcctttt ccctgccagc ggatcagtac gccgtccgcc
    35641 actaagtcgc tgatggcttt gcgaatggta atgcggctga cgttatattg tgtacaaagc
    35701 tcgttttcgg tagggatctg ttgcccggcc tggtaaaccc cctgcgcgat atcatccagc
    35761 agtcgctggc ggacggtagc gtagaggagt tgatgagagt agcggtccgt agctgacata
    35821 atcgaccctg aaataaagaa tgaattactc ggattatagg gtcgttttcc ggcaagtaac
    35881 agcacgttgg cgtgaagatg ctcacgccaa cgttatacct accaggcacc gtggtactga
    35941 atggttttcg ccgcgcacgc cgttccctgc gccatcgcct gcggtaatgt catccccgca
    36001 gaccagccgc aaaggaatcc ggcaatgaac gaatctccgg cacccatggt gtcgataacc
    36061 gtcaccggtt caggagcctg acgccagaac tgcgcgccat cccaggcaat gctgccgttt
    36121 tcacccagcg tgacaatcac tgttcctgcg ccacgggcaa caatcgcttt catcttcaga
    36181 cgcagcgttt cgtcttcttg cggtgcggag gcaaaggcaa aatcgagatg cggcaccagt
    36241 gtctgccaga gcgggctgtc ccacttgtcg gagaagtcga aagcggtaag tttgcccgca
    36301 gcgtgcagct gtgggaatgc gtcttccgca tgtccccaga ttgccgcgtg cacaatgtca
    36361 tactgcgcca gccaggcgta atcctcttca ctcagggcaa agtcggccat cacgccttcg
    36421 gtgtagtcgc caaaaacgcg atcattgtcg tgcagttcca cctgagtttg tgcggtaacg
    36481 ccgtgtttcg tatggacatg gctgatatcg acgcccatgc gggcgagatc ctgcttcagc
    36541 tttgtgccgt agtcatcgtc acccacccag gtaatgcatc ccggctgtat gccgtagcga
    36601 gtgcagtaca ccgccacatt gaccgcatta ccgccagaaa acgctttatt cagttgcggg
    36661 tagatatcga cgcagttatc gccgattgtc gccagggttt tcatctctca tcctccggca
    36721 gcagcgcgcg aaagcgttcc agcgcctggc gggcatagag tctgggctcg ttcatataca
    36781 tcgtcaccag ctccaccgta cagtaaccct catagccccg ctcaataata tcgcgcatca
    36841 gttcccgcag cggcattttg ccttctccag gaatgtaatg cgtgtcgctg gccccgtcgc
    36901 tgtcgacaat atgcagatga cgtaatttat cgcccagttt gtcgaaataa ctcatcaccg
    36961 gttccgcctg gacatacggc gcgcaaatgt cgaccatgct gaacaggcgc ggcgaaggca
    37021 ccagcgccag cgcatgaagc acatcattag cattacacac gatgttcgat tcatacggcg
    37081 ttaacggttc gaggattaga tccatgccga tgttttccgc gtactcatac agttcgctta
    37141 ggttctctgc cagccgtccc cagataacat taggtggcgt gagatagccc gcgtgggccg
    37201 cggaaatcag cgtataaccc gcgttcatct cttttgccat atccatcgcc agcttgatca
    37261 tgtcgaggct ttcgcgacgc atatgttcat cgcccagcat catgttatac ggatagccat
    37321 tggtttctgg cgtatagccg ataatcggca tctgatacgt ctgcgccagc gccttgattt
    37381 gtttgatgcc gcccgctttt aagtccggcg cgaacgcgtg cgggcgaccg ccccaaattt
    37441 cgatgccgtc gtaacccagc tcgcttgcat cacgaaatgc gtgttcaata ggcagccgct
    37501 ggtggccgca ggtaaacata cctgttttta tcgggtaact ccttgcgtaa atccggcccg
    37561 ttgccgggcc gggcgaggga ttaatattcc accagaccac cgtaatagcg gcgttcatcc
    37621 gggttgtgat ctttgtaaat agacaggtag tagcagagcc actccattgg cacgaacatc
    37681 aggaacggtg ccagccacgg gtgcagccct tgcgaaattt cggcgtaatc gatgacgatc
    37741 acgttgtcag tacgctgttt aacaaagtta atggcgcgtt cggtggtgtg gcgactttca
    37801 tcattgccga gcaggaacag gaacggaacg cccggttcga caatctccag cgggccatgg
    37861 cggaactctc cgctctcaat cacgcagccg tgcgtccagg taaattccat cagcgttaca
    37921 atgccttctt tgtaacccag cggacgcagc ggacccgcag caacggtata aatcatcggc
    37981 cactggctgg ccagttcacc aagctggcgg cctttttctt cccaggtgcg taccagatga
    38041 ccgagcgcat tcggcaactg cttgagatcg tttttgatct tgccgatttc cgcgttcggc
    38101 gcgaggcggg tgatcatctc cagcaccacg ctgtagcaga gcagcaggtg aatttcccag
    38161 atacagtcgg cctgataatc aatgctaaat tccgccgccg aggtaatcgg gctgtccgcg
    38221 cgtttggtga acgccgcagt gagtgcgccg caggcccggc ccagctccag cgctttgatt
    38281 acctcttccg ttttaccgta gtcagaaacg ccaatcaccg cgcaacgatc gtcgaggcga
    38341 tacggggtgt tatcgcagaa ctcccagccg gaaatggcgt agacctgaag atcggaaaag
    38401 cgatccgcca gatgtttcgc cgcttgcgcc gcgttgagtg gcgagccgca ggcaacgaaa
    38461 taaatacgat caatgtcgcg cttcaccatc tcttccacga tggcgtgcac cagcggaacg
    38521 tcatggctga gaactttttc cacttcctga accatatttt cggtgaccag aaagtccacg
    38581 gtgcttttat caatatccaa cattttattt tctccagata acattacgac aaagcgttga
    38641 gctggcggct acgcttcgcc cagaaggcgt aagcaggcag accagtagca ataacgatga
    38701 cggcgcagat aaggccggga atcggtgccc agacaaaggt tgaggcgacc agaatgaggc
    38761 ttgacgcaat ggcgagggtg gtcatcagcc cgaaagcagg agtacgccac agcggtttgt
    38821 aatcgtcgcg tttacgacac cagatgatgg agccgaaggt gagggtattt ttgaaacaca
    38881 tcaccagggt gaaataaccc agcaggctgg tgagatcgga aacgaagatg aagaagagcc
    38941 ccagcgcccc ttgcaggatg atggagacat ccggcgtgtt gtatttcgga tgcacatggc
    39001 cgaagcattt aaagaacagg ttgtctttcg ccatcgcgta ttccagccgc ggctggtaca
    39061 tcacgcagct ggaaagcgaa ccaagaatga cgatcatcgc cgtgatggca acaaagatcc
    39121 cagcggtgct gccgagtgcg gggatccagg tcagggcgtc ggaaatcggc gtttcagaat
    39181 tggcgagttt gtcgaagggc atcaggtcgg aaatcaccag cgccagcagg gtgtagagca
    39241 ccagaaccag cagacaggaa ccaatcagcg ctcgtggcat ggtttttccg gggtttttaa
    39301 tttcgccggt catataacag atagaggcca tgccggtata cgaccaactg gtggcagaga
    39361 tccccgccag cagcgccata aagctgcccg ttgcgccaat cgcagtggtg gtaggggcgg
    39421 caaaattctc cgctttaaac cagaagatcc caaggccaat gacgatagtg aacgggataa
    39481 ttttggcgat ggtaattagc gtctgaaacg ctgcgccgcc ttcaacggag cgcaggtgta
    39541 gcaacataaa ggcgataatt aatccggcgg cgataaattt accgggcaac ggatcgatag
    39601 gcgttaaaaa gccaagattg ctgacaatcg ccagcgccat aatcgacaat gacggcgcat
    39661 cgttggccca gaagctggcc cagccggaga ggaaagccag cggtcggctt ccggcatttt
    39721 tcagataaac ataatctgcg ccattttccg gataagcggt ggatagttcc gcatagacgc
    39781 acatttgcgg gatcacaatt aacccgccaa tgacaaacgt gagcaccgta agccacggcg
    39841 tgcccgctgc ttttgccact tcacccacag atacaaaaat accggagccg acggttgtcc
    39901 cgacggcgat tgcaagaacg gcccaaaatc cgagcttgcg ttggagttcc tggcttccca
    39961 tagcgatacc tttttcttgt ccaacacgtt gtaggggaga gtttgcagtc atttaaaagg
    40021 taacatgaca atgcatgatg aatataataa catatgatgt tatgtaatgc ggaggaagat
    40081 cacaaaattt cgcacaggat cgcgctgtgg ctaatgaatg tagttatcca attgaaatta
    40141 aagtgaaaat atttttacgg gtggggagca agaaggatat agaaacaaat acgccctcgg
    40201 aaaatccaga gggcgtcggg caattaaacc ggtgttagcc gatttctgtc agagacttac
    40261 tgtgcagtag gaccgcaacc gccaatgatt ttagaaatag aaattgccgg gtgcagcagg
    40321 tagtcgtaag agcagttctt atcacggttt tcaatatgac cagtacatgc agttaacgta
    40381 gccagtactg cacctaccag tgcaacttta ataaatttgt tcatttac
//
LOCUS       DADMIB010000015        40038 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.015, whole genome shotgun sequence.
ACCESSION   DADMIB010000015 DADMIB010000000
VERSION     DADMIB010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40038
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.015"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(457..2148)
                     /gene="fruA"
                     /locus_tag="JNZ89_000809"
     CDS             complement(457..2148)
                     /gene="fruA"
                     /locus_tag="JNZ89_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIBC"
                     /protein_id="HAY8934763.1"
                     /translation="MKTLLIIDANLGQARAYMAKTLLGAVARKAKLEIIDNPNDAEMA
                     IVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASG
                     PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD
                     LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTE
                     GKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS
                     AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS
                     TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV
                     LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV
                     ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG
                     AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA"
     gene            complement(2165..3103)
                     /gene="fruK"
                     /locus_tag="JNZ89_000810"
     CDS             complement(2165..3103)
                     /gene="fruK"
                     /locus_tag="JNZ89_000810"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HAY8934764.1"
                     /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
                     VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
                     VTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ
                     CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA
                     HVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
                     LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
     gene            complement(3103..4233)
                     /locus_tag="JNZ89_000811"
     CDS             complement(3103..4233)
                     /locus_tag="JNZ89_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HAY8934765.1"
                     /translation="MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGML
                     AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAAS
                     SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV
                     ASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVS
                     RAANAFAVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT
                     SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL
                     MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA"
     gene            4601..5782
                     /gene="setB"
                     /locus_tag="JNZ89_000812"
     CDS             4601..5782
                     /gene="setB"
                     /locus_tag="JNZ89_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter SetB"
                     /protein_id="HAY8934766.1"
                     /translation="MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
                     EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWN
                     RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGP
                     PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMQKELPLATGTVEAPRRNRRDT
                     LLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
                     KRLGKRFLMRVAAVGGVCFYAGMLMAHSPAILLGLQLLNAIFIGILGGIGMLYFQDLM
                     PGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRTKD
                     V"
     gene            complement(5779..6033)
                     /locus_tag="JNZ89_000813"
     CDS             complement(5779..6033)
                     /locus_tag="JNZ89_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HAY8934767.1"
                     /translation="MECRPGCGACCTAPSIFSPIPGMPDGKPANTPCIQLDEQQRCKI
                     FTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAS"
     gene            6188..6760
                     /gene="yeiP"
                     /locus_tag="JNZ89_000814"
     CDS             6188..6760
                     /gene="yeiP"
                     /locus_tag="JNZ89_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007750416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HAY8934768.1"
                     /translation="MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFS
                     DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
                     ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
                     GLVIQVPEYLSPGEKIRIHIEERRYMGRAD"
     gene            6983..8449
                     /locus_tag="JNZ89_000815"
     CDS             6983..8449
                     /locus_tag="JNZ89_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HAY8934769.1"
                     /translation="MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLT
                     DRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLN
                     AKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHS
                     APGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHV
                     SFPGTMVDRIVPAATDESLAEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVA
                     GVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLNE
                     QAPTLQIKDVDLTQYADKLIARFANPALKHKTWQIAMNGSQKLPQRMLAGIRIHLGRE
                     TDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLRE
                     VFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI"
     gene            8567..9553
                     /locus_tag="JNZ89_000816"
     CDS             8567..9553
                     /locus_tag="JNZ89_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HAY8934770.1"
                     /translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWTVLVNEFGEVGI
                     DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
                     DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE
                     SEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLA
                     ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPE
                     GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA"
     gene            9592..10305
                     /gene="lpxT"
                     /locus_tag="JNZ89_000817"
     CDS             9592..10305
                     /gene="lpxT"
                     /locus_tag="JNZ89_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kdo(2)-lipid A phosphotransferase"
                     /protein_id="HAY8934771.1"
                     /translation="MIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQ
                     KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTA
                     VVLNQLGQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF
                     MWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR
                     LITFFDKSLPGKNKHFQNK"
     gene            10717..11283
                     /gene="mepS"
                     /locus_tag="JNZ89_000818"
     CDS             10717..11283
                     /gene="mepS"
                     /locus_tag="JNZ89_000818"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional murein DD-endopeptidase/murein
                     LD-carboxypeptidase"
                     /protein_id="HAY8934772.1"
                     /translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG
                     SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF
                     REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
                     SSGVIISSMNEPYWKKRYNEARRVLSRS"
     gene            11464..13020
                     /locus_tag="JNZ89_000819"
     CDS             11464..13020
                     /locus_tag="JNZ89_000819"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY8934773.1"
                     /translation="MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD
                     TLIIDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK
                     KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG
                     VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA
                     GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ
                     FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL
                     IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD
                     MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
                     ITSPVLDAVLTLAKRLNMLTVAEGGETPEQARWLSEPGVNFMQGYWISRPLPLDDFVR
                     WLKKPYTPQW"
     gene            13102..14916
                     /locus_tag="JNZ89_000820"
     CDS             13102..14916
                     /locus_tag="JNZ89_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY8934774.1"
                     /translation="MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFD
                     YVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI
                     AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV
                     KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSW
                     KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND
                     AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDF
                     EWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPV
                     SKGDGYDRDNLLKADTLLNEAGWVLKGQQRVNATTGQQLSFELLLPASSNSQWVLPFQ
                     HSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRLWRAMPWPSSDLQISWSSEYINST
                     YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW
                     WDKFSHPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE"
     gene            14917..16011
                     /locus_tag="JNZ89_000821"
     CDS             14917..16011
                     /locus_tag="JNZ89_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HAY8934775.1"
                     /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
                     GNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER
                     YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
                     HNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY
                     QKITDYLWHITLPVLATVIGGFAALTILTKNSFLDEVRKQYVVTARAKGVSEKNILWK
                     HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
                     YIFTLIGLLLNIVSDISYTLVDPRIDFEGR"
     gene            16011..17036
                     /locus_tag="JNZ89_000822"
     CDS             16011..17036
                     /locus_tag="JNZ89_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8934776.1"
                     /translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND
                     KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA
                     TSINFATDKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL
                     AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
                     VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL
                     TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDA
                     FDPNKAV"
     gene            17038..18627
                     /gene="yejF"
                     /locus_tag="JNZ89_000823"
     CDS             17038..18627
                     /gene="yejF"
                     /locus_tag="JNZ89_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter ATP-binding protein
                     YejF"
                     /protein_id="HAY8934777.1"
                     /translation="MTQTLLAIEDLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES
                     GSGKSVTALSILRLLPSPPVEYLSGDIRFRGESLLHASDQTLRGVRGNKIAMIFQEPM
                     VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG
                     ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS
                     IVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL
                     DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR
                     LINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
                     QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD
                     EPTSSLDKTVQAQILTLLKSLQQKLQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQG
                     PCARVFAAPQQEYTRQLLALS"
     gene            complement(18631..18975)
                     /locus_tag="JNZ89_000824"
     CDS             complement(18631..18975)
                     /locus_tag="JNZ89_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934778.1"
                     /translation="MTSLQLSIVHRLPQNFRWSAGFAGSKVEPIPQNGPCGDNSLVAL
                     KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
                     AIAEPFSNYNPF"
     gene            complement(19308..20491)
                     /gene="bcr"
                     /locus_tag="JNZ89_000825"
                     /pseudo
     CDS             complement(19308..20491)
                     /gene="bcr"
                     /locus_tag="JNZ89_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311101.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Bcr"
     gene            complement(20519..21214)
                     /gene="rsuA"
                     /locus_tag="JNZ89_000826"
     CDS             complement(20519..21214)
                     /gene="rsuA"
                     /locus_tag="JNZ89_000826"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HAY8934779.1"
                     /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE
                     HDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD
                     IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL
                     TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE
                     YRPLTEEEIASVV"
     gene            21363..23123
                     /locus_tag="JNZ89_000827"
     CDS             21363..23123
                     /locus_tag="JNZ89_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HAY8934780.1"
                     /translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL
                     ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR
                     NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW
                     IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS
                     NGLFSEADLNRELKKQQRITPHIISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAED
                     AALITGDTPGAERDVLIEDFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLY
                     QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT
                     FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
                     CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF
                     RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ
                     VREKVFDYEGRFRRAHELRG"
     gene            23248..23532
                     /gene="rplY"
                     /locus_tag="JNZ89_000828"
     CDS             23248..23532
                     /gene="rplY"
                     /locus_tag="JNZ89_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HAY8934781.1"
                     /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH
                     DKVMNMQAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA"
     gene            complement(23671..24678)
                     /gene="yejK"
                     /locus_tag="JNZ89_000829"
     CDS             complement(23671..24678)
                     /gene="yejK"
                     /locus_tag="JNZ89_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HAY8934782.1"
                     /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH
                     RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF
                     VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
                     PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
                     RQNVRQQVYSYCNEQLQAGEEIELESLSKELAGVSEVSFTKFAAEKGYELEESFPADR
                     STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
                     N"
     gene            24860..25087
                     /locus_tag="JNZ89_000830"
     CDS             24860..25087
                     /locus_tag="JNZ89_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YejL family protein"
                     /protein_id="HAY8934783.1"
                     /translation="MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL
                     INTSIAPAQRQAIANSFARALQSSINEDKAH"
     gene            25107..26867
                     /gene="pbgA"
                     /locus_tag="JNZ89_000831"
     CDS             25107..26867
                     /gene="pbgA"
                     /locus_tag="JNZ89_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin transport protein PbgA"
                     /protein_id="HAY8934784.1"
                     /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP
                     TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL
                     IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL
                     RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL
                     EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE
                     KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL
                     NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRPQSDEQTATQWINWLGRYAQEDNR
                     WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALLDSGKLDNTVVIITAG
                     RGIPLSEDEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP
                     ASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDE
                     KPQLSLLLQVLTDEKRFIAN"
     gene            26942..27018
                     /locus_tag="JNZ89_000832"
     tRNA            26942..27018
                     /locus_tag="JNZ89_000832"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26976..26978,aa:Pro,seq:ggg)
     gene            27237..28478
                     /locus_tag="JNZ89_000833"
     CDS             27237..28478
                     /locus_tag="JNZ89_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000101912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8934785.1"
                     /translation="MARKTPPLTTVQIKAARPAEKEYTLQDGGGLFLLVKPSGSKLWR
                     FSYYRPSDKKRILLSFGSLDDVSLADARKRRSEYRALISAGTDPQGHEKKKREAEARR
                     QGNTFENVAAAWYQVKISQNLAPNTIKDIWRSLDKYVFPFIGNTPIDTLTARRFVEVL
                     TPIKERGNLETLKRVLQRVNEVMDYAANSGLIDANPAMNVRKAFPSPVKKHMPTIRPE
                     QLPELMQALSVSATERQTRLLIEWQLLTVTRPAEASSTRWDEINLDAKQWTIPAGRMK
                     MRRDHVIPLSGQAMAVLEAMKPISHHRNYVFPSLKDPQQPMNSQTANAALRRMGFAGV
                     LVSHGLRAIFSTAANEEGFEPDVIEAALAHVDTNEVRRAYNRSNYIEKRIVLMRWWGE
                     FVEAAATGVTLASGKRGIRAV"
     gene            28954..29160
                     /locus_tag="JNZ89_000834"
     CDS             28954..29160
                     /locus_tag="JNZ89_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000387479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HAY8934786.1"
                     /translation="MEAIRKIIFRQEVKKIIHIKADSTLQSMINAGEFPQGFRVGLRR
                     RGWYEDDVLAWQKEREQEARGTAA"
     gene            29175..29840
                     /locus_tag="JNZ89_000835"
     CDS             29175..29840
                     /locus_tag="JNZ89_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001329530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934787.1"
                     /translation="MTNTKKAAPIWSRLSEQLTRCALCVYDPKHKHGDDSRYQAGGQC
                     NQSGSVRCHTCNERFSLYSLRNCSRAKAHGANLSDSCSIFLRRLFRAGDNVLVNSLSV
                     IVLSCIAMRRNTSHHGADSFYPLGSMPRRFSSVRPNSLSQLARLMPSLCASLSNCSFS
                     SGEIRILNCGDCPSPLGLLSRLIIDKWSPIELAFPLLGGHLNTRALKKAKPRKCHYHS
                     QGF"
     gene            29866..30066
                     /locus_tag="JNZ89_000836"
     CDS             29866..30066
                     /locus_tag="JNZ89_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000226783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HAY8934788.1"
                     /translation="MVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARS
                     RCPSGCVAVFAARIRQGETYAQ"
     gene            30056..30277
                     /locus_tag="JNZ89_000837"
     CDS             30056..30277
                     /locus_tag="JNZ89_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934789.1"
                     /translation="MHNKTTPNAAAAALTTLMHALIDIECTAELAQGEEQKDRTQFAL
                     ECIRYIATRSLNDAKNILVADCENGGGYA"
     gene            30270..30503
                     /locus_tag="JNZ89_000838"
     CDS             30270..30503
                     /locus_tag="JNZ89_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934790.1"
                     /translation="MRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYK
                     STGLDVLNIAADYAEYVAEARYRRKFPEDVSHA"
     gene            30496..30729
                     /locus_tag="JNZ89_000839"
     CDS             30496..30729
                     /locus_tag="JNZ89_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934791.1"
                     /translation="MRDIYHETIDRAFLALSHSENMLEILRIWLETLGDNERDKQKSR
                     IATALITLLEPVIMELQEIDLLHDRYKEQHTGE"
     gene            30735..31034
                     /locus_tag="JNZ89_000840"
     CDS             30735..31034
                     /locus_tag="JNZ89_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HAY8934792.1"
                     /translation="MKLKYSGLTASGNTHPKFTRGDIYRDQYGGTVMIKGVEERRVTY
                     RREGYEYDCVMPVYQFRRDFSLVQTAPHNVPTSNARARANIQKLKTMINGFRGKK"
     gene            31031..32431
                     /locus_tag="JNZ89_000841"
     CDS             31031..32431
                     /locus_tag="JNZ89_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000833619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY8934793.1"
                     /translation="MKSAPNLKKQPYDKMTEVIIFAGSDAWAHAKQWQEQDGRLAGDN
                     VPPVVLADDQLDELADLRIIDEGRYCVRLYKAGHIRPSNINAIAHKLAAAGVTDANYY
                     PEGMHSHMRENWREYLERVRGKEPVEEKNHQRKTTLPMSVGSTGYDTQLDYVVKGIIP
                     AVSLCSIYGASGSYKSFLAGSWACHVATGRQWGGRRVAHGAVLYVVGEGGIGVPRRVK
                     AWEVVHDEQVKNLYLVNRPIFPAAPLDVDEMVIAARQVERETGKPVRMIILDTLARCF
                     GGNDENDSRDMGAFIRGCDELKRRTGATVLVVHHSGKDETKGARGSSAFRASLDAEYR
                     IRREDAGSEALVISCTKMKDAEELKEAAYDLRVVELFTDADGELITSLVVVDDPRPPV
                     ELERIEEAGNKTENHTALWGCIRSRTQNGDKCTIPLLRDDMKKLGYEMKNFRRWLYKL
                     EKDGVISIDGDDVAPL"
     gene            32631..32882
                     /locus_tag="JNZ89_000842"
     CDS             32631..32882
                     /locus_tag="JNZ89_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934794.1"
                     /translation="MTQKRRDRTEPKYKALDMTEHTLKVAIRTIDRHTREGYAKEHPD
                     LISAFMTTAAANFATLTEREIAEAEQVTTINVKTGEVEL"
     gene            32879..33289
                     /locus_tag="JNZ89_000843"
     CDS             32879..33289
                     /locus_tag="JNZ89_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HAY8934795.1"
                     /translation="MTAQIAAYGRLVDDPQVKQTSKGTPMTLARMAVSLPCSQAQDGQ
                     ATLWLSVIAFGKQAGFLAKHQKGDVASVSGTMQVSQWTGQNGETRQGWQVIADSVISA
                     RAARPGGNRRKTTGTQGNQPPAGGDDPYGDDISF"
     gene            33300..33572
                     /locus_tag="JNZ89_000844"
     CDS             33300..33572
                     /locus_tag="JNZ89_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PerC family transcriptional regulator"
                     /protein_id="HAY8934796.1"
                     /translation="MVHDRIAEELEAKGFYRRAAARWGEVMQLVETDKERHHITMRRL
                     ECSRKAQRAPEPPDNFGDLKKAVDRTYAEMGIDGAGDEIWRNYQDS"
     gene            33811..34017
                     /locus_tag="JNZ89_000845"
     CDS             33811..34017
                     /locus_tag="JNZ89_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000796968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934797.1"
                     /translation="MAEEKKGGVSVYISPEIVEVLKQRHKKNYEAGVAAGLDPLMTPE
                     PSIGSLVRSYLLAALGMHKNYGGE"
     gene            34017..35072
                     /locus_tag="JNZ89_000846"
     CDS             34017..35072
                     /locus_tag="JNZ89_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HAY8934798.1"
                     /translation="MAGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFST
                     QNIMLDTLDIEEVTMSAFCSPMVGSQVQRDKGYETSTIKPGYMKPKHEIDPTKTIMRM
                     AGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYE
                     IDWKIPEKNIIEQSDGKKWSEHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLR
                     SFKKFRELYDLSRGSESAAEMACKNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYF
                     LEPDLLVLGNTNNKGLVAYGAIMDQEAVRTGATQNMYYPKNWIEDGDPAIEYVQTHSA
                     PQPVPADIRKFVTVKIG"
     gene            35084..35419
                     /locus_tag="JNZ89_000847"
     CDS             35084..35419
                     /locus_tag="JNZ89_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HAY8934799.1"
                     /translation="MDTPYIELFAGSQQVSTTLVHFAADAGVIQEFTPLMLVDNGEFK
                     PWDGQESGKAVYLTSYLVDTSKQKSAQCYKTGIFNIAAVNWPESVDTDAKKCAAFAGS
                     GVSVQPLAR"
     gene            35432..35845
                     /locus_tag="JNZ89_000848"
     CDS             35432..35845
                     /locus_tag="JNZ89_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016240519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="HAY8934800.1"
                     /translation="MATNESIMALPLASKFKAEARAMADRGLSTYEAVYQLNKLEEQD
                     KPRADAIMALHEHKDYQPLLRAMANVPCIDVDTAKNILNMTIEQERPKVAPELTAAFE
                     NFMDMHSPQTVSAGMAYDGRNPGDDGDIDRILKTI"
     gene            36007..36441
                     /locus_tag="JNZ89_000849"
     CDS             36007..36441
                     /locus_tag="JNZ89_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934801.1"
                     /translation="MIDKACFVSQQEIAEHFKVNRTTIRAWTKQGMPYLNADRGKSGG
                     YHIGHTLLWSSGKSRLEAIRYHVETSALEKIMFARLLSSERDEYSSEETEHRFDEGLQ
                     IYGYSPEDVSKARNKMAGFLAGWRHAVSVRRASMEQSADTEQ"
     gene            36722..37003
                     /locus_tag="JNZ89_000850"
     CDS             36722..37003
                     /locus_tag="JNZ89_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934802.1"
                     /translation="MTEAEILGLIRRAGGISQQTDEQATQPDSVTAENYARVVAEVMR
                     RDGIQLNDVDMRNIRIRVLEMLAYNRRVALYRETEKITYHWKKPERLRR"
     gene            complement(37682..>40038)
                     /gene="yejO"
                     /locus_tag="JNZ89_000851"
     CDS             complement(37682..>40038)
                     /gene="yejO"
                     /locus_tag="JNZ89_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311108.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter YejO"
                     /protein_id="HAY8934803.1"
                     /translation="GGYQYIEMNGTAEYSVLNDGYQIVQMGGAANQTTLNNGVLQVYG
                     AANDPTIKGGRLIVEKDGITVLAAIEKGGLLEVKEGGLAIAVDQKAGGAIKASTRVME
                     AFGTNRLGQFEIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEVMDGGTATGV
                     DKKAGGKLIVSTNALEVSGTNSKGQFSIKDGVSKNYELDDGSGLIVMEDTQAIDTILD
                     EHATMQSLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNGRANVWAGTM
                     VNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKADVSLENSVW
                     AIIADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITLTTNTLSGNG
                     NFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTGGGDAAFTLG
                     NAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLVFDAELDTVR
                     ERLGSVKSVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRFSREESSTIR
                     GLFFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRFANTIHGKMS
                     NGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTLSNGMRADVG
                     NTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNHVKVNDDGKFNNDVAGT
                     PGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF"
BASE COUNT        10070 a        10185 c        10018 g         9765 t
ORIGIN      
        1 agcctataat tacgacataa tccttttcgc gcatagcaca tcctctggta aaaaattacc
       61 aaccctgtca atccacaaga atatagatac tgcaaagacg gtttaaacat gtgttcatat
      121 ttaaacatgt gctcatagca tgcatgtttt acgtaaagta aattaccgcc agagaggcaa
      181 aatgggcaga tttgagcagg ctcacaaaat gcgattaaat gcctgaatta caaaagcgag
      241 gaatttgtga cgggatgcac agaacgggaa caataaaaaa ggcagaaaat aatctgccct
      301 tgaggaaata accttagtgt ttgatgaacg tttcaagttt ctactgaaag ataaaaccat
      361 ttaaattcat aaaattacat tcacaaaccg gtcattctct ttgcgctcat caaatgttac
      421 agggcaggaa atttctgccc tgtaacacac cttttattac gctgctttcg ctactgcgtc
      481 cacttccgga cgtttcagga aggcataggc caaacccgcc accagcgtac cggcaataat
      541 tgctaccagg taacccagta ccggcgtaat agcgccaggg atcagcagaa caaacagacc
      601 accgtgcggt gccatcagtt tcgcaccaat cgccattgag attgcgccag tcagcgcccc
      661 acccacgata cagcacggca gcacacgcat cggatcacga gcagcaaacg gaattgcacc
      721 ttccgaaatg aagcacagtc ccaataccag agcggctttg ccaccttcct gctgcgcttt
      781 gtcgaatttg cgacgcgcca ccattgttgc cagacccatt gccagcggtg gcaccatacc
      841 tgccgccata atcgccgcca tcgggccata ggtttgagta ctcagcagac ccacaccgaa
      901 tgcgtacgct gctttgttta ccggaccgcc catgtcagta cacatcatgc caccgaggat
      961 cgcccccagc agaaccgcat tcgcagtccc catggtctgc agccagtgag tcagcccttc
     1021 gagaatgcca gcaactggtt taccgatcag gtagatcatc gccagaccga ccaccagact
     1081 ggaaattagc ggaatgatca ggatcggttt cagcgcctcc atactctgtg gcagtttcag
     1141 ttgcgtactg attaacttcg caatgtaacc agccaggaag ccagcaatta taccgccaat
     1201 aaagccagaa ccggtgctga ccgccagcat accgccaatc agacccggcg tgaggcccgg
     1261 acgatcggca atggagaagg caatataacc tgccagtacc ggcaccatca gcgcaaaggc
     1321 tgaaccaccg ccaatctgca tcagcgccgc tgccaacgta cccggctctt taaacgcttc
     1381 gataccaaaa gcaaaagaaa gcgcgataca cagaccacct gcgacgacca tcggcagcat
     1441 ataagagacg cctgtcagca agtgacggta agcgcctgca ctctctttct taccttcagt
     1501 ggtcgccgtt tgagctttgc ccgccggttc atacggcgtt gcttcagcaa ccgctttatc
     1561 cagttcctgc gcggttttct tcagcgccag accggtagag gtacgataca tcggtttacc
     1621 agcaaatttc gccagatcca cttcgatatc tgccgccaca atcaccagat ccgctgctgc
     1681 gacttcttca ggggtgattg cattgcccgc gccaacagaa ccacgggttt caactttcac
     1741 ccaccagcca cgttttttcg cttcggtttc aatggcttca gccgccataa aggtgtgtgc
     1801 tacgccagtc gggcaagcag tcaccgcaac tacgcgtttc ggaccgctgg cagcaaccgg
     1861 tgctgtcgca gcgaccggcg cagtgtaagg tttcgcatgg cctttggctt cactcaggaa
     1921 cagctcaggg tgcgcaactg cccgggaaat atcacccagc cagacatttt taccgttcag
     1981 cgcgctgtca ttcgggatgg aatcaccgag aacaatcgcc atttctgcgt cgttcggatt
     2041 gtcgatgatt tccagttttg cttttcgcgc caccgcgccc agcagggtct tcgccatata
     2101 ggcgcgtgcc tgaccgagat tagcgtcaat aatcagcagc gttttcatta tgcctctcct
     2161 gctgtcagtt aaaaggttgt aagtcgacgc gcgccatcat tgcggccaac tgcggacgat
     2221 cggtaatacc cacattgctt tgacttaccg ccagggctgc aacagctgtc gccagacgca
     2281 gtgtgtgttc actggattca cgcatcagca agccataaat caggccacca accatagaat
     2341 cccctgcgcc aacggtgctt acgacatcga ctgacggtgg tttggcgatc cattcgccgg
     2401 aggcattaac ccaaagcgcg ccttcggcac ccagtgaaat aacaacatgc gcaatacctt
     2461 gttcacgtag cgcatgtgca gcttcaatca catctttcat ttcaggcagt ttacggcctg
     2521 cccaaatttc caactcgcgg cggttaggtt tcaccagcca cggtgccgct ttcaaacctg
     2581 ctactaacgc ttcacggcta ctatcaaaga taatgcaagg acactgacta cgcaggcgag
     2641 tcatccagtc ggtgaacgct tccgggctga cgcctgacgg taagcttccg ctgacacaga
     2701 ccatatcgaa ctgaccgagc cagctcagag aatcagtcac aaagcgttcc cagtcggcgg
     2761 gggtgacttc aaaacccgag aagttgaagt cggtcacttc gccgtctttt tccgtcagct
     2821 taacgttaat tcgggtgcgc ccctgtacaa cctggaaacg gttggcaatg cccagctcgc
     2881 tgaacagttg ctgaaaacca tcctgattgt ctttacccag gaagccgcca acggtgacat
     2941 caattcccag gtcttttaat actttggcca cgttgatgcc tttacccgcc gcatgcagac
     3001 cggtggtttt caccaggttc acttcgccgc gttcaatttc cgggcagaaa ccaacaaggt
     3061 cataagccgg attaagggtg atcgtagcaa cacgtctgct cattatgcgc cctccccaag
     3121 accagcagcg atagcgtcgc caatggcttt cagcgcctgt tcagcatctg caccctgggc
     3181 ggtaaagcgt aggcgatgac ctttcttaac gccaagtgcc acaactttca tcagactacg
     3241 tccgtttgcc ggtttgccgg tgccatcaag gtttgtcacg gtaatatcac tgttaaattg
     3301 tttaatggta ttgaccagca tggtacctgg acgagcatgc aggccgtgtt cattgcgcac
     3361 cacaaactcc gcgcttaaca cgtcgtcggt cggcgcatca tcgctggtca gcagcgccag
     3421 caacgttgcc gcatctgctt tcagcaagcg gtcagcttta ttgtcgagca ataaatcagc
     3481 gagacgctta agaaccgcga tgggctgatc gtcattcatc gccacactca ccagcatggc
     3541 tgccgtttcg ccgtccacag caaaagcatt tgccgcacgg cttaccgcaa tcgcgctacg
     3601 cagattgcct tcggcgctat cgctcagcca gataccctgt ccgagattca gcggttgttc
     3661 attgatggct ttggtgacga aagtggcgtc aactgccccc gcctctttca gacgcgcagc
     3721 gttcagcgcc tgaagagtca gcagatcgct ggcgacgata tccagcgtca gcatttcgtt
     3781 gtcgagcttc agctgctcac tctgcttttc gcccatcagt aatgcgcgaa gttcttctgc
     3841 tgttgttgct gacttcagtt gttcagcaac ggaatcatcg ctcagtacgt gggtcagctg
     3901 gcgtagcagg cccagatgtt catccgagct ggcagcaata ccgattgcca cgtacgctac
     3961 ctgaccgtca ccccaggtga cgccttccgg gaactgaaat acctgaacgc cggttttcag
     4021 cacctgatcg cgggtgtcgg tagtgccgtg tggaatagca ataccattgc cgaggaacgt
     4081 tgaggtttgc tgttcgcgcg ccagcatgcc attgacgtag ccttctgcta cattaccggc
     4141 ctgcaccagc gccgcagcga cctggcgaat cgcctcttct ttgtctccgg ccttttcgcc
     4201 cggatggatg tcctgtacgg ataactggaa catagttctc ctctcttgct gaattgaaac
     4261 gattcagcct ctatgagaaa aaaagcgcca acctggctta gggttaaaga caagatcgcg
     4321 ctgaaacgtt tcaagaaagc ataatacttc tgtttcagca cgcaaggaaa gccgtaaagt
     4381 tatgagcaaa agtttgatgt gctgcacatt tttttgtcat ttttcctaat tgctgatggg
     4441 aaaatccgtt atcagcaatt tcatttcagc agcgtcagca gccaatcagc aacagtgaaa
     4501 tggcattttg attattcgtg gcgcttttga tttcgctgtc tgtttatttt ctgacaagca
     4561 gcgtaaactc cgcgtcttcc tcttccagtg atagacctgc atgcataact cccccgcagt
     4621 ctccagcgcg aaatcgtttg acctgacctc gacggcgttt ttaatcgttg cctttctcac
     4681 cggtattgcg ggtgctctgc aaaccccgac actcagtatt ttccttaccg atgaagtaca
     4741 tgcccgtccg gcgatggtgg gattcttctt taccggcagc gctgtcattg ggattctggt
     4801 aagtcagttt ctcgctgggc gctctgataa gcgcggcgat cgcaaatcgc tgattgtctt
     4861 ttgctgcctg ttaggcgtgc tggcctgcac cctttttgcc tggaatcgca actactttgt
     4921 tttgctattc gttggcgtct ttcttagcag ctttggctcg accgctaacc cgcaaatgtt
     4981 tgcccttgcc cgtgaacatg ccgacaaaac cggacgtgag gcggtgatgt tcagctcttt
     5041 tttacgcgct caggtttcac tggcatgggt cattggccca ccgctggctt atgcgttagc
     5101 gatgggtttc agctttacgg taatgtatct gagcgcagcg gtagcgttta ttgtttgcgg
     5161 cgtgatggtg tggctgtttt taccgtcgat gcaaaaagag cttccgctgg cgaccggcac
     5221 ggttgaagcg ccgcgccgta accgtcgcga tacgctactg ctgtttgtca tttgtacatt
     5281 gatgtggggc tcgaacagcc tgtacatcat caacatgccg ctatttatta tcaacgaact
     5341 gcatcttccc gagaaactgg ccggtgtgat gatggggacc gccgccgggc tggaaatccc
     5401 gacgatgttg attgccggat atttcgccaa acgtctgggt aagcgtttct taatgcgcgt
     5461 tgctgccgtg ggtggcgtct gtttttacgc aggaatgctg atggcgcatt cacctgccat
     5521 tctgttgggc ttgcagctgc taaatgctat ttttattggc attctgggcg gcatcgggat
     5581 gctctatttt caggatttga tgcccggtca ggcaggttca gccaccacgc tctataccaa
     5641 cacgtcgcgc gtgggctgga tcatcgcagg atcagtggcg ggcatcgtcg ccgagatctg
     5701 gaattatcac gctgtgttct ggtttgcgat ggtgatgatt atcgccactc tgttttgctt
     5761 actgcggact aaagatgttt aagacgcggt cagcatttcc agatcgataa gccaggtcat
     5821 ggcctgctga cgcgagttac cgcacatttc agcgctggct tgtaagcctg cacagacttt
     5881 cggtcgcagt ggcgaggtga aaattttaca gcgttgctgt tcatcaagct gaatgcaggg
     5941 cgtattggcg ggcttgccat ctggcatacc gggaataggg ctgaaaattg aaggggcagt
     6001 gcaacacgcc ccgcaacccg gacggcattc catacgttgt tctcttaagg ttaaccaccg
     6061 gattgatgag cgcgcacagt accacctttt ttgcaccagc aaaagtgcga ataccacttg
     6121 cccgaaaggc ccgtcgcgag tactttgtcg cgatattttt gacattttcg actacaggaa
     6181 tttttcgatg ccaagagcga acgaaattaa aaaaggtatg gtactgaatt acaacggcaa
     6241 actgctgctg gttaaggata ttgatattca gtcgcccact gcccgcggtg ccgctacgct
     6301 gtacaaaatg cgtttttctg atgtccgtac cgggctgaaa gtagaagagc gtttcaaagg
     6361 tgatgatatc gttgacaccg tgacgctgac ccgccgttac gttgacttct cctatgtcga
     6421 tggcaacgaa tatgtcttta tggataaaga agactatacc ccgtatacct tcaccaaaga
     6481 tcagattgaa gaagagttgc tgtttatgcc agagggcggc atgccggaca tgcaggtgct
     6541 gacctgggac ggtcaactgc tggcgcttga gctgccgcag accgttgatc tggaaatcgt
     6601 tgaaaccgca ccaggcatca aaggggcatc tgccagcgcc cgtaacaaac cggcgacatt
     6661 gagcactggt ctggtgattc aggtaccaga atacttaagc ccgggcgaaa aaattcgtat
     6721 ccatatcgaa gaacgccgtt atatggggcg tgctgactaa cttcagccgc atgcagaaaa
     6781 gggatagctc aggctgcccc ttttttaatt tattatacca atcttctatt ttgcgcttcc
     6841 tgaacacctt acgccctcaa ttttcactcg ttgattgatc gccctcacac ttcatcgcat
     6901 taacaatcca gaccaatttc aattgctgtc atataacttt acactgtcat tgttaattta
     6961 tcgttactaa gacgtgactc ctatgaagac aattgcctcc gttacgctcc cgcatcatgt
     7021 acacgctcca cgctacgatc gccagcagtt gcaatcacgt atcgttcatt ttggctttgg
     7081 cgcctttcac cgcgctcatc aggcgttact gaccgatcgt gtgctgaatg cccagggcgg
     7141 cgactggggg atctgtgaaa tcagcttgtt cagcggtgat caactgatga gccagctccg
     7201 cgcacagaac catttatata ccgtgctgga gaaaggtgcg gacggcaatc aggtgataat
     7261 tgtcggtgcc gttcacgaat gccttaatgc aaaactggat tccttagcgg caattattga
     7321 gaaattttgc gagccacagg tggcaattgt ttccctgacg attaccgaaa aaggctattg
     7381 tattgacccg gccaccggtg cactcgacac cagtaatccg cggattattc acgatctaca
     7441 aacccctgaa gaacctcact ccgcaccggg tattctcgtc gaagcactga aacgccgccg
     7501 tgagcgcggc cttacaccgt ttaccgtgct ctcctgcgac aatattcccg acaatggcca
     7561 tgtggtgaaa aacgcggtgc tgggaatggc agaaaaacgt tcgccagaac tcgccgggtg
     7621 gataaaagaa cacgtcagtt ttccgggaac catggtcgac cgcattgttc cggctgcaac
     7681 cgacgaatca ctggcagaaa tcagccagca tctgggggta aatgatccct gcgcgattag
     7741 ctgcgaaccg tttatccagt gggtggtgga agataacttc gtcgctgggc gtcctgcctg
     7801 ggaagtcgca ggtgtacaaa tggtgaatga tgtcctgcca tgggaagaga tgaaactgcg
     7861 tatgcttaat ggcagccact cttttctcgc ttatctgggt tacctttcag gattcgccca
     7921 tatcagtgat tgcatgcagg atcgcgcatt tcgccatgcc gccagaacat taatgctgaa
     7981 tgagcaagcg ccgacactac aaattaaaga tgtcgattta acacaatatg cggacaagtt
     8041 aattgctcgt tttgctaatc cggcgctgaa acataagacc tggcaaatcg caatgaatgg
     8101 tagccagaaa ttaccgcaac gtatgctggc aggtattcgc atacatctgg ggcgcgaaac
     8161 ggactggtcg ttgctggcat taggcgttgc tggctggatg cgttacgtca gcggcgttga
     8221 tgatgccgga aatgccattg atgttcgcga tccgcttagc gataaaattc gcgaacttgt
     8281 tgcgggcagc agcagtgaac aacgcgtaac cgccctgctt tccctgcgtg aagttttcgg
     8341 tgatgatctg ccagataacc cgcattttgt gcaggccatc gaacaagcct ggcaacaaat
     8401 cgtacaattc ggcgcacatc aggcgctatt aaacaccctc aaaatttaac gatttctgcg
     8461 gttaaagcgg atgaagctca ccttcgtccg ctctcccctt ctcttttctg ccttttttag
     8521 ccaggattaa cgctcagtta acttaccaga gtattgcgga gccgttgtga ccaggaccaa
     8581 cctcatcacc ggttttctcg gcagcgggaa aaccacgtcg attcttcatc tgttagccca
     8641 taaagatccc aacgaaaaat ggacggtact ggttaatgaa tttggggaag tcggaattga
     8701 tggtgctttg ctcgccgata gcggcgcatt gctgaaagag atccccggcg gctgcatgtg
     8761 ctgcgttaat ggtttaccca tgcaggtagg gttgaatacc ttactgcgtc agggaaaacc
     8821 agaccgcttg ttgatagagc cgaccgggct gggccatccg aaacagatcc tcgatctgtt
     8881 aaccgcacca gtctatgaac cgtggataga tctgcgcgcc accttgtgca ttctcgatcc
     8941 acgcttgctg ctggacgaaa aaagcgccag caatgaaaac ttccgtgacc agctggctgc
     9001 cgcagacatc attgtcgcca ataaatccga ccgtgcgacg cccgaaagtg agcaagcgct
     9061 acagcgttgg tggcagcaaa atggtggcga tcgacaatta attcacagtg agcatgggaa
     9121 agttgacggt catcttctgg atttgccgcg tcgcaattta gccgagttgc ccgccagcgc
     9181 cgcgcattct catcagcatg tcgtgaaaaa agggttagca gcgttaagcc tgccagagca
     9241 tcaacgctgg cgtcgcagtc tgaacagcgg gcaaggatat caggcctgcg gctggatatt
     9301 cgacgctgat acggtattcg acaccattgg cattctggaa tgggcgcgac ttgcaccggt
     9361 ggaacgcgtc aaaggcgtgc tgcgtattcc cgaagggctg gtacgaatca accgtcaggg
     9421 cgatgacctg cacattgaaa cgcaaaacgt tgcgccaccg gacagccgta ttgagctgat
     9481 ttccagcagc gaagctgact ggaatgcctt gcagagcgcg ctgttgaagc ttcgtttagc
     9541 gactaccgcg taaggttgcc tgcgtttttc agtaagataa ttagagaaaa tatgattaaa
     9601 aatttgccgc aaatagtgtt gttgaatatt gtcggcctcg cgctgtttct ttcctggtat
     9661 attcccgtta atcatggatt atggttgccg attgatgcgg atatttttta tttctttaat
     9721 cagaaactgg tcgaaagtaa ggccttttta tggctggttg cattgaccaa caatcgcgct
     9781 ttcgacggtt gttctctgct ggcgatggga atgttgatgc tgagtttctg gctgaaagaa
     9841 aacgccccag gcagacgacg tatcgtgatt attggtctgg taatgctatt aactgcagtg
     9901 gtattaaacc agctgggtca ggcattaatt cctgtaaaac gggccagccc aacattgacg
     9961 tttactaata ttaaccgcgt cagcgaactg ctctctgtcc ccacgaaaga tgcctcacga
    10021 gatagctttc ccggcgatca cggcatgatg ctgcttattt tttcggcatt catgtggcgt
    10081 tatttcggta aagttgcagg tcttatcgcc cttattattt ttgtggtttt tgcgtttccc
    10141 agagtaatga ttggcgcaca ctggtttact gacatcattg tcggttcgat gaccgtgata
    10201 ttgatcggtt tgccctgggt gttgctgacg ccattaagtg atcgattaat cacctttttt
    10261 gacaaatcac taccgggaaa aaacaaacat ttccaaaaca aataactcac agtaattaac
    10321 atcatcaggt ttatttttat agtgaggata atcctgatga tgcgcaccgt gctttcatct
    10381 atcgaacgca aaaatcattc tctaagtaaa tgaatggatt gcatgcgttt cactcaatcg
    10441 tactttaatt gaccaatccc gcttattaac tttctgtatc actttttctt ataaaaaatc
    10501 atgtaaaacc gctcgccaag accgcaccaa tcgggtaatc tcgaactcgt tttgcctcgg
    10561 cggtagatta tcctcacagc atataatttt gtgcgttagt ccacagattt ggccttaagg
    10621 aattgtttca acatgcccag gtaattagtc tcgtgtcgct tggcattttt ttataacgat
    10681 atttgtcgtt aaggacttca agggaaaaca aacaacatgg tcaaatctca accgattttg
    10741 agatatatct tgcgcgggat tcccgcgatt gcagtagcgg ttctgctttc tgcatgtagt
    10801 gcaaataaca ccgcaaagaa tatgcatcct gagacacgtg cagtgggtag tgaaacatca
    10861 tcactgcaag cttctcagga tgaatttgaa aacctggttc gtaatgtcga cgtaaaatcg
    10921 cgaattatgg atcagtatgc tgactggaaa ggcgtacgtt atcgtctggg cggcagcact
    10981 aaaaaaggta tcgattgttc tggtttcgta cagcgtacat tccgtgagca atttggctta
    11041 gaacttccgc gttcgactta cgaacagcag gaaatgggta aatctgtttc ccgcagtaat
    11101 ttgcgtacgg gtgatttagt tctgttccgt gccggttcaa cgggacgcca tgtcggtatt
    11161 tatatcggca acaatcagtt tgtccatgct tccaccagca gtggtgttat tatttccagc
    11221 atgaatgaac cgtactggaa gaagcgttac aacgaagcac gccgagttct cagccgcagc
    11281 taataaaccg tttggatgca atcccttggc tatcctgacg agttaactga aagcactgct
    11341 taggtagtgc ttttttgttt tcattcatca gagaaaatga tgtttccgcg tcttgatcca
    11401 ggctatagtc cggtcattgt tatcttttaa atgttgtcgt aatttcagga aattaacgga
    11461 atcatgttca tacgcgctcc caattctgga cgtaagctcc tgcttacctg cattgtagca
    11521 ggcgtgatga ttgcgatact ggttagctgc cttcagtttt tagtggcctg gcataagcac
    11581 gaagtcaaat acgacacact gattatcgac gtacaaaagt atctcgatac ctattttgcc
    11641 gacctgaaat ccactactga ccggcttcag ccgctgacct tagatacctg ccagcaggct
    11701 aaccccgaac tgaccgctcg cgcggcgttt agcatgaatg tccgtacgtt tgtgctggtg
    11761 aaagataaaa aaacattctg ttcatctgcg actggtgaga tggacattcc actcaatgaa
    11821 ttgattccgg cgctcgacat taataaaaac gtcgatatgg cgatcttacc cggcacgccg
    11881 atggtgccga acaaacccgc aatcgtcatc tggtatcgca accctttgct gaaaaatagc
    11941 ggtgtgtttg ccgctctgaa tctcaacctg acgccttctc tcttttatag ttcacggcag
    12001 gaagattacg atggcgtcgc cctcattatt ggcaatactg cgctatctac cttttcttca
    12061 cgtttgatga acgttaatga attaaccgac atgcctgtcc gtgaaactaa aattgcgggc
    12121 attcctctga ccgttcggct ttatgcggat gactggacat ggaacgatgt gtggtacgca
    12181 tttttactgg gcggcatgag tggaactgtc gttggcctgc tctgctatta cctgatgagc
    12241 gtacgtatgc gccccggcag agaaatcatg accgccatca agcgcgaaca attttacgtg
    12301 gcgtatcaac cggtggtgga tacacaagct ttgcgagtaa cgggcctgga agtactgcta
    12361 cgctggcggc atcctgtcgc gggagaaatt cccccggatg ccttcattaa ctttgccgaa
    12421 tcgcaaaaga tgattgtgcc gctgactcag cacctgtttg agttaattgc ccgcgatgcc
    12481 gcagaattag aaaaagtgct gccagtaggc gtcaaatttg gtattaacat tgcgccggac
    12541 catctgcaca gcgaaagctt taaagcagat atccagaaac tgctcacttc cctgcccgca
    12601 caccatttcc agattgtgct ggaaattacc gagcgcgata tgctgaaaga gcaagaagcc
    12661 acacaactct tcgcctggct gcactcggtc ggcgtagaaa ttgctattga tgacttcggc
    12721 accgggcaca gcgcgcttat ctatcttgag cgttttacgc tcgattatct gaaaattgac
    12781 cgtggattta tcaacgccat cggtacggaa acgatcactt cacccgtact tgacgcggtg
    12841 ctgacgctgg cgaaacgcct caatatgctg acggttgctg aagggggcga aacgccggaa
    12901 caggcgcgat ggctaagcga acccggcgtt aatttcatgc aaggctactg gattagtcgc
    12961 ccgttaccgc tggacgattt tgttcgctgg ctgaagaaac cgtatacgcc gcagtggtaa
    13021 ggtgtgctta cgtcccttat tattcatagt gaaagcatgc cggattgcgg ctaatgatga
    13081 gtaaaaggaa atccgttgca gatgattgtg cgcatactgc tgctgtttat cgccctgttc
    13141 accttcggtg cgcaggcgca ggctatcaag gaaagctatg cctttgccgt gctgggcgaa
    13201 ccccggtacg catttaattt caaccatttt gattatgtga accccgccgc gccaaaaggt
    13261 gggcagataa cgttgtcagc cctcggtacc ttcgataatt tcaaccgcta tgcactgcgc
    13321 ggcaacccgg gcgcacgcac cgagcagttg tacgacacgc tatttacgac ttccgatgac
    13381 gaaccaggca gttattaccc gctgattgct gaaagtgcac gctatgctga cgattattcc
    13441 tgggtggagg tcgctattaa tccgcgcgcc cgttttcatg atggttcgcc cattactgcc
    13501 cgcgatgtag agtttacttt tcaaaaattt atgaccgaag gcgtgccgca atttcgtctg
    13561 gtctacaaag gcaccaccgt caaagccatt gcaccgttaa ccgtgcgcat tgagttagct
    13621 aaacccggca aagaagatat gctgagtctg ttttcgctgc cggtatttcc agaaaagtac
    13681 tggaaggatc acaaacttag cgacccgctc gccacgcctc cgcttgccag tggtccgtac
    13741 cgcgttacgt cctggaaaat ggggcaaaat attgtctatt cccgtgtgaa agattactgg
    13801 gcagcaaact taccggtaaa ccgtggacgc tggaatttcg acaccattcg ctacgattat
    13861 tacctcgatg ataatgtcgc ctttgaagcg tttaaagcag gtgcctttga tttgcgtatg
    13921 gaaaacgacg ctaaaaactg ggccacgcgt tataccggta aaaatttcga taaaaaatac
    13981 atcatcaaag atgagcaaaa gaacgaatca gcccaggata cgcgctggct ggcgtttaat
    14041 atccaacgtc cggtattcag cgatcgccgg gtccgggaag caatcactct cgcctttgac
    14101 tttgaatgga tgaacaaggc gttgttttac aacgcctgga gtcgcacgaa cagttatttt
    14161 cagaataccg aatacgcggc cagaaattac cccgacgccg cggagctggt gcttctggca
    14221 ccaatgaaaa aagatctacc gccagaagtc ttcacacaaa tctaccagcc gccggtatct
    14281 aaaggcgatg gctacgatcg tgacaacctg ttaaaagccg acacacttct caacgaagcg
    14341 ggctgggtgc tgaagggtca gcaacgcgtt aatgccacaa cgggtcagca actcagcttt
    14401 gaattattgc ttcccgcaag cagcaatagt cagtgggtat tgccgttcca gcacagcctg
    14461 caacggctgg gtatcaacat ggacattcgc aaggtggata actcgcaaat caccaaccgc
    14521 atgcgcagtc gcgactatga catgatgccg cgcctatggc gggcgatgcc gtggcccagt
    14581 tccgatttac agatttcctg gtcatcggaa tatatcaatt ccacttataa tgcccccggc
    14641 gtgcaaagcc cggttatcga ctcactgatc aaccaaatta ttgccgcgca gggaaataaa
    14701 gaaaaattat tgccgttggg gcgagcactg gatcgcgtat taacgtggaa ttattacatg
    14761 ctgccaatgt ggtacatggc ggaagaccgt ctcgcctggt gggataaatt ctcccacccc
    14821 gctgtacgcc ctgtttacag cctgggtatc gatacctggt ggtatgacgt taataaagcg
    14881 gccaaactgc cgtcagccag gcaacaggga gagtagatgg gcgcttacct gattcgccgt
    14941 ctgttgctgg tgatcccaac attatgggcg attatcacca tcaacttttt catcgtgcaa
    15001 attgcgcctg gcggtccggt cgaccaggcc atcgccgcca ttgagtttgg taatgccgga
    15061 gtattacccg gcgcaggcgg tgaaggtgtt cgtgccagcc atgcgcaaac gggtgtcggc
    15121 aatatcagcg acagtaatta ccgtggcgga cgcggattag atccagaagt gatcgctgag
    15181 atcactcatc gctacggttt tgataagccg atccacgaac gttacttcaa aatgctctgg
    15241 gactacatcc gctttgattt tggtgatagc ctgtttcgca gcgcctcggt gctgacgctg
    15301 attaaagaca gtctgccggt ttccatcacc ctcggattgt ggagcacgct gattatctat
    15361 ctggtgtcga ttccgttagg cattcgcaaa gctgttcata atgggagccg ctttgacgtc
    15421 tggagtagcg catttatcat tatcggctac gccattccgg cctttttgtt tgccatcctg
    15481 ctgattgtct tcttcgcggg cggcagctat ttcgacctgt tccctctacg cggcctggtt
    15541 tccgctaact ttgattcgct gccgtggtat cagaaaatca ccgattatct gtggcatatc
    15601 acgctgccgg tgctggcgac ggtgattggt ggctttgcgg cgctgaccat actgacaaaa
    15661 aactcattcc ttgatgaagt gcgcaagcaa tacgtggtga ccgcgcgtgc gaaaggggta
    15721 agtgaaaaaa atattctctg gaaacatgtg ttccgcaacg ccatgctgct ggtgattgcc
    15781 ggttttccgg cgacgtttat cagcatgttt tttaccggct cgctgctgat tgaggtgatg
    15841 ttttcactca atggtctggg cttactgggc tacgaagcga ccgtctcgcg cgattatcct
    15901 gtaatgtttg gtaccttgta tattttcacc ctgattggcc tgctgctgaa tattgtcagt
    15961 gatatcagct atacgctggt tgatccgcgt attgattttg agggacgtta atgtcgcgac
    16021 tcagccccgt caatcaggcc cgttgggcgc gttttcgtca taaccgtcgc ggctactggt
    16081 cgttatggat tttcctcgtc ttgtttggtt tgagtttgtg ttctgagctt atcgccaacg
    16141 ataaaccatt gctggtacgt tatgacggca gttggtattt cccgttgttg aaaaactaca
    16201 gcgaaagcga ttttggcggc ccgctggcaa gtcaggctga ttatcaggac ccgtggctga
    16261 aacaacggct ggaaaataac ggctgggtac tgtgggcacc gattcgcttt ggtgctacca
    16321 gtatcaactt tgctaccgat aagcccttcc cttctccacc ctcccggcaa aactggctgg
    16381 gaacggatgc caacggcggc gatgtgctgg cacgcattct ctatggcacg cggatctcgg
    16441 ttctgtttgg cctgatgctg actctctgtt ccagcgtgat gggcgtgctg gcgggggcgc
    16501 tacaaggcta ttacggcggt aaagtcgatc tctggggaca acgctttatt gaagtatggt
    16561 cggggatgcc gacgctgttt ttgattattt tactttccag cgtcgtacag cctaacttct
    16621 ggtggctgct ggcaattact gtcttgtttg gctggatgag tctggtcggc gtggtgcggg
    16681 cggagttttt acgtactcgt aatttcgact acattcgtgc ggcgcaggcg cttggcgtca
    16741 gcgatcgcag tatcatcctg cgtcatatgt tgcctaatgc catggtcgcg accctcacct
    16801 ttttaccgtt tattttatgt agttcgatca ccaccctgac ctcactcgat ttcctcggct
    16861 tcggtctgcc gctcggttca ccgtcactcg gtgaactgct gttacaaggg aaaaataacc
    16921 ttcaggctcc gtggcttggg atcaccgcct tcttgtcggt ggcgatatta ttgtctttgc
    16981 tgatctttat tggtgaagcc gtccgcgacg catttgatcc taataaggcg gtgtagcatg
    17041 acgcaaactc tgttagcgat tgaagatttg tcggtgggtt ttcgccatca gcaaaccgta
    17101 cgtacagtag tcaatgatgt ttcactacag attgaggctg gcgaaacgct ggcgctggtg
    17161 ggtgagtcag gttcaggcaa aagcgttacc gcgctgtcaa ttttacgcct gctcccttcc
    17221 ccgccggttg aatatctctc cggcgatatt cgttttcgtg gcgaatcgct gcttcatgcc
    17281 agcgatcaaa cgttgcgcgg tgtacgcggt aataagatcg ccatgatttt tcaagagccg
    17341 atggtgtcgt taaatccatt gcataccctg gaaaaacagc tttatgaagt gctttcactc
    17401 caccgcggga tgcgtcggga agcggctcga ggcgaaattc ttaactgcct tgatcgcgtt
    17461 ggtatccgcc aggcggcaaa acggctgaca gattatccgc atcagctctc cggcggcgaa
    17521 cgccagcggg tgatgattgc gatggcgctg ttaacgcgac cggaattatt aattgccgat
    17581 gaaccgacca ccgcactgga cgtctctgtc caggcgcaga ttttacagct gttgcgcgaa
    17641 ctgcaaggcg agctgaatat gggcatgctg tttattactc ataacctcag cattgtcaga
    17701 aaactggccc accgcgtggc ggtaatgcaa aacggtcgct gtgtcgagca aaattacgcc
    17761 gctacgctat ttgcctcacc cactcatcct tacacacaaa agctactcaa cagtgaaccg
    17821 tcaggcgatc cagtgccgtt gccagaacct gcctcaacgt tgctggatgt tgaacagctt
    17881 caggttgcct tccccattcg caaagggatt ttgaagcgca ttgtggatca taatgtggtg
    17941 gtgaaaaaca tcagttttac gctacgagcg ggtgaaacac tgggtttagt gggcgagtcc
    18001 ggttccggga aaagtacgac gggactggcg ctgctgcgac tgattaattc tcagggcagc
    18061 atcatctttg acggtcagcc actgcaaaat ttaaatcgcc gccagctgtt acctattcgt
    18121 catcgcattc aggtggtatt tcaggatcca aactcctcgc tcaacccacg actcaacgtt
    18181 ttgcagatta ttgaggaagg cttacgggtt caccagccga cgctttctgc cgcacaacgc
    18241 gaacaacaag tgatagccgt gatgcatgaa gtgggattag atcctgaaac acgccaccgt
    18301 tatccggcgg agttctctgg tggtcagcga caacgtattg caattgccag ggcattaatt
    18361 cttaagccct cgctgatcat acttgatgaa ccgacatcat cactcgacaa aacggtacag
    18421 gcgcaaatat tgacgctatt gaaatcattg caacaaaagc tgcaactggc ctatttgttt
    18481 atcagccacg atttgcacgt tgtccgcgcg ttatgtcatc aggttatcgt actgcgacaa
    18541 ggggaagtag tggaacaagg accgtgcgcg cgcgtgtttg ccgcaccgca gcaggagtat
    18601 acgcgtcagc tactggcgtt gagctgacgc ttaaaaagga ttgtagtttg aaaagggttc
    18661 ggcaattgcc acaccaaaat ttttcaatcg gcatgttgca gcaaactcgt cctggcgatt
    18721 tacaaacagg cacggctcac cttcacactc cagcaccgaa cacggaactt cgatgtcgct
    18781 taacgcctgg cttagtttgt acatcaccga ccatgcatta tcaccatccg ggctaagcaa
    18841 tttaagcgcc accaggctgt tgtcaccgca cggtccattt tgcggaatcg gttcaacctt
    18901 cgaacctgcg aaaccagcag accagcgaaa gttctgcggt agacgatgga cgattgagag
    18961 ttgtaatgaa gtcacttatt ttccccggaa gcacatttac ttcacaattt gtttacatca
    19021 attttaacac atcatcaaca atccgtcttt atacagatcg taaagattga tgcctcgcct
    19081 gcgtggcctc tatggctctg atttaagtaa tatctgcggg cgtggtcacg tttgcggggc
    19141 tatatgtacc cgtttctgcg atctaactca acctttttaa ctacaatgat gtgacttttt
    19201 acataaattg attttacata aaataaacat atatcggggg aatgatagat ttgtggttga
    19261 catgcatcaa caaaggaagc cttttagctt cctcgttgtg caatagatca ccgttttttc
    19321 ggtcgactgg cgtacagaca gaagagaatg gagctgcttg cgcagaatgc aattgaccaa
    19381 atcatcggcc atgcagagtt aaaggtcgca agagaaagca atgcgccaac aattgcccct
    19441 atgccaaaac ggaaggttcc tgccagcgaa gatgccgttc ccgccatatg gggaaactca
    19501 tcaagaatga ccgccatcgc attggatgac accatcgaca cacagcccac aaacgccgca
    19561 acgccaacca ccagaatccc agccccagca gcgcactgat gaccatccac gctgccataa
    19621 taaattgtat ccacaacccc gagcggaaca tatttaacgc gccaatgcgg cgaacgaagc
    19681 ggctgttaaa gatggtcatc acgaacagga aaacaatgtt tagtgcaaag taataaccaa
    19741 agttttccgg cgcgacgtgg ttaatttcaa tgtagacaaa cggtccggcg ctcaggaacg
    19801 agaacattcc ggcaaagctg aaaccgctgg ccagcatata actcaggaca cgcttatgac
    19861 ggaacagcgc cgcaaagtta ccaatagtag tacgaatgtg aaaaggctgg cgacgctccg
    19921 gtggtaaggt ttctttgatc agaaagaaga tcattgccga agccagaatc gccgccacgg
    19981 cgaggatcca gaagatgtaa tgccagctca gccacaccag cacccagccg ccaactatcg
    20041 gtgccatcag cggtgcaatg gtcgtcacca gcatgacaaa cgacatcatc cgcgagaact
    20101 cttctttcgg gtagatatca cgcatcaaag cgttgataac catgctggcc gcagccgcag
    20161 ccagcccgtg gaaaaaacgc atcacaatca gctgatcgat ggtttgtgcc aacgcacacg
    20221 ccaccgcggc ggcggcaaac accagcgtac cgccgagcac caccggctta cgcccgaagc
    20281 tgtctgccat cggcccgtag attaactgcc ccaacgcaaa gcccagaata taagtactga
    20341 gggtcatctg cgtactgccc gccggtacgc caaactgcgc tgaaattacc ggtagcgcgg
    20401 gcagatacat atcaatcgac agcggcatca acatggccag caggccaagg ataaaaacaa
    20461 tagcaaacga cgaatgctgt cgggtggtca caacgggctc ctgaaagtca ttgaaaagtt
    20521 agacgacgct ggcaatttct tcttcagtta acggacgata ttcaccgggg gctaaatcag
    20581 catccagcgt aataccgcca atacgttcac gatgcagctc aaccacgtgg ttacccacgg
    20641 cggcgaacat gcgtttcacc tgatgataac gcccttcgct gatggtcaga cgaacctgcg
    20701 ttggggtaat cacttccagc accgcaggct tagtgagatc tttttcgtta tgcagctgca
    20761 cgcctttagc aaattgctct gccgtatcgt cagctacagg tgattccagt gtcaccagat
    20821 aggtcttctc gcaatgatgg cgcggagaag taatgcggtg cgaccactga ccatcatcag
    20881 tcatcagcac cagaccggtg gtatcgatat ccagacgtcc tgcggcgtgc agtttccagg
    20941 ctaccggttc atccagaaaa tagagcaccg ttgggtgatc agggtcgtcc gtggagcaaa
    21001 catagccctg aggcttattg agcatgaagt aacgtggacc atgttgctgc gccagcgggt
    21061 tgccatcgta agcgacatca tgttcaggaa gcagtttgaa cgctgcatta cgaacaattt
    21121 cgccatcgac ggtgacacga ttgccgcgga tttcacgccc ggcaatagca cggctaacgc
    21181 cgagttgctg tgcgataaat ttatcaagtc gcatgtgtgt gattttgcct gtaaaaacgg
    21241 aggtcgggca ttgacccgaa aatctgaact gttgtctgcc cagtatagcg gtctaataac
    21301 atccctcaag ggaaaaagat ccatggcata ctattagcag aataatctac ctacgcgaga
    21361 ccatgatttt tacactccgc ccatatcagc aagaagccgt ggatgccacg ctcaaccatt
    21421 ttcgtcgtca taaaacccct gccgttatcg tgctgcccac cggcgcaggt aaaagcctgg
    21481 tgattgccga actggcacgg ctggcgcgtg gtcgtgttct ggtgctggca cacgtcaaag
    21541 aactggtggc gcaaaaccat gcaaagtatc aggcgctggg gctggaagcc gatatttttg
    21601 ccgctgggtt aaagcgcaaa gagagccacg gtaaagtggt atttggcagc gtgcagtcgg
    21661 tcgctcgtaa tcttgatgcc tttcagggtg aattttcgct gttgattgtc gatgaatgcc
    21721 accgtattgg tgacgatgaa gagagccagt atcagcaaat cctcactcac ctgactaaag
    21781 tgaatcccca cttacgcctg ctggggctga ctgccacgcc ttttcgattg ggcaaaggct
    21841 ggatctacca gttccattat cacggcatgg tacgcggcga tgagaaagcc cttttccgtg
    21901 actgcattta tgagctgccg ctgcgttata tgattaaaca cggctatctg acgccgccag
    21961 aacgactgga tatgccagta gtgcaatacg atttcagccg cttgcaggca cagagtaacg
    22021 ggctgttcag cgaagctgat ctcaaccgtg agctgaaaaa acagcaacgc attacgccac
    22081 atatcatcag ccagatcatg gagttcgccg aaaagcgcaa aggggtaatg attttcgccg
    22141 ccaccgttga acacgcaaaa gagattgtgg gattactgcc tgccgaagat gcagcactga
    22201 ttactggcga cacccccggc gctgagcgcg atgtgttaat tgaagatttt aaagcccagc
    22261 gttttcgcta tctggtcaac gtcgcggtac tgaccaccgg atttgacgcc ccgcacgtcg
    22321 atcttatcgc cattctgcgt cctaccgaat cagtgagtct ttaccaacaa attgtcgggc
    22381 gcggtctgcg tctcgctcct ggcaagactg attgcttaat tcttgattat gcgggtaatc
    22441 ctcacgacct ctacgcgccg gaagttggta caccgaaagg caaaagtgac aacgtcccgg
    22501 tacaggtttt ctgccctgcc tgcggttttg ccaacacctt ttgggggaaa acgaccgccg
    22561 acgggacatt gattgaacac tttggtcgtc gctgtcaggg atggtttgaa gatgacgacg
    22621 gccatcgcga acagtgtgac ttccgtttcc gttttaaaaa ttgcccgcaa tgtaacgcgg
    22681 aaaacgatat tgccgcccgc cgctgccgcg aatgtgacac ggtactggtt gatccggatg
    22741 atatgttaaa agcggcgcta cgactgaaag acgcgctggt attacgctgt agcggcatgt
    22801 ctttacagca tgggcacgac gagaaaggcg aatggttgaa aatcacctat tacgatgaag
    22861 acggcgcgga tgtgagtgag cgtttccgtc tgcaaacgcc cgcccagcga actgccttcg
    22921 agcagctttt tatccgcccg catacgcgca caccgggcat ccctctgcgc tggatcaccg
    22981 ccgccgatat cctcgcccag caagccttac tgcgacatcc ggattttgtc gtcgcccgca
    23041 tgaaaggtca gtactggcag gtgcgtgaaa aagtgttcga ttacgaaggt cgttttcgtc
    23101 gggcgcacga attacgcggt taatggtagt tttgattgat gtataaggcg attgagtata
    23161 gaatctcgcc cgcttttgca tacgcaaagc agatcactta cctgttgctg ggtcgcctgt
    23221 agcaggatta atttaagaga gaaagaaatg tttactatca acgcagaagt acgtaaagag
    23281 cagggtaagg gtgcgagccg ccgcctgcgt gccgctaaca agttcccggc aatcatctac
    23341 ggtggcaaag aagcaccgct ggctatcgag ctggatcacg acaaagtcat gaacatgcaa
    23401 gctaaagctg aattctacag cgaagttctg accatcgttg ttgacggtaa agaaatcaaa
    23461 gttaaagctc aggacgtaca gcgtcacccg tacaaaccga agctgcagca catcgacttc
    23521 gttcgcgctt aattgctgaa taagttgtaa aaaaccccgc tccggcgggg ttttttgtat
    23581 ctgcagatta tgcctgatta cggtattgct attttttgca ggccagataa ggcgttcacg
    23641 ccgcatctgg cattcagaat acaaaaccga ttaattgccg ccagacgtcc ggcgctgcaa
    23701 ttggtcgcgc aaattcggcg gcgtgccttt aatggtcaag gtatcggttg ctggatccca
    23761 gaagatgcgt tcacctaaca gcatcgcatc aaagttaata gtcaagccac cgccgctacc
    23821 ggcaaacttc gtcaactgac gcagtgtgct acggtctgcc gggaagctct cttccagttc
    23881 gtagcctttt tcagccgcaa acttcgtgaa gctcacttcg cttacgcctg ccagctcttt
    23941 cgacagcgat tccagttcga tctcttcgcc tgcctgcagc tgctcattac agtagctata
    24001 aacctgctgg cgcacgttct gtcgctctgc tttatccagt tgtgcttcgg cagtgaaatc
    24061 atcaaccgct tgcaacagcc cacggttttg cgctttcgcg ttcaatcctt cgctggcccc
    24121 gaggaaatcc ataaagaaat ccgccacttt gcgccctact cgccctttca ggaaagtgag
    24181 atagcgggtg gactctggat tggtttccca ttcggttaaa tcgatacgcg caacaatatc
    24241 cgcatgattg atatcaagat aatgggttgg gttgatgtcg agattttcgt taacgcgcat
    24301 actgctcagg ttgctcagaa ctgccaccag cagatactcc accgccagat aacggtagtg
    24361 gcaaaacagc acgaatccac cgtcagcaaa aggatatttc gctaattcgt cacgcaggcg
    24421 cccggttgcc gcgcggctaa atgccagaaa gtcctcttcg ccctgacgct gtaagcgcag
    24481 cgtctgcgcc agttcactct cttcgctaaa caagccgtaa gctttatttt tggcgctata
    24541 gacccgatgc agttctgcca ccatctcaac gacggtttct gtcggttcca gcaatgaatc
    24601 gcgcaacacc agctcaaggt tctgctcatc acgcttgata agctggtgca gagcaatctg
    24661 gttgatatcc agactcatga taaactctcc tttaagaccg ggcggtattc aaccaccgcc
    24721 ggttaagcga cgcaataaaa gatggcggtc attttacaga aggcagcgta acgagaatga
    24781 tttaacgcat aaaaaagcag aaaaaaaacc gttgctacgg taatatgttg ccctttcatc
    24841 aactaactga tttcgattta tgccacaaat ttcccgctac agtgatgaac aggttgaaca
    24901 attgctcgca gagctgctca acgtactgga aaaacataag gctccgaccg acctttccct
    24961 gatggtgtta ggcaacatgg tcactaacct tatcaacacc agcattgccc cggcccaacg
    25021 ccaggcaatt gccaactctt ttgcccgcgc cttacagtcc tctatcaacg aagacaaagc
    25081 gcactaaggg aaacagataa caggttatgg taactcatcg tcagcgctac cgtgaaaaag
    25141 tctcccagat ggtcagttgg gggcactggt ttgcactgtt caatattctg ctttcgctcg
    25201 tcattggcag ccgttacctg tttatcgccg actggccgac aacgcttgct ggtcgcattt
    25261 attcctacgt aagcattatc ggccatttca gcttcctggt gttcgccacc tacttgctga
    25321 tcctcttccc gctgaccttt atcgtcggct cccagaggct gatgaggttt ttgtccgtca
    25381 ttctggcaac ggcgggaatg acgctattac tgatcgatag cgaagtcttt actcgtttcc
    25441 atctccatct taatcccatc gtctggcagt tggttatcaa cccagacgaa aatgagatgg
    25501 cgcgcgactg gcagctgatg ttcatcagcg tgccggttat tttattgctt gaactggtgt
    25561 ttgcgacgtg gagctggcaa aagctgcgca gcctgacgcg tcgtcgacgc ttcgcgcgcc
    25621 cgctggccgc attcttattt atcgccttta tcgcctcgca tgtggtgtat atctgggccg
    25681 atgccaactt ctatcgcccg atcaccatgc agcgcgctaa cctgccgctt tcgtacccga
    25741 tgacggcgcg acgtttcctt gagaagcatg gcctgcttga tgcgcaggag tatcaacgcc
    25801 gtcttattga gcaaggtaat ccagacgccg tttccgtaca gtatccgtta agcgaactgc
    25861 gctatcgcga tatgggcacc gggcagaatg tgctgttgat tactgtcgat ggcctgaact
    25921 actcacgctt cgagaagcag atgcctgcgc tggcaggttt tgctgagcaa aatatttcgt
    25981 tcacgcgcca tatgagctcc ggcaacacta cagacaacgg catctttggc ctgttctatg
    26041 gcatctcgcc gagctatatg gacggcattc tgtcgacccg tacccctgcg gcgttaatta
    26101 ctgcgcttaa tcagcaaggc tatcagctgg gattattctc gtcagatggc tttaccagtc
    26161 cgctgtatcg ccaggcattg ttgtcagatt tctcgatgcc gagcgtacgc ccccaatccg
    26221 acgagcagac cgccacgcag tggatcaact ggctgggccg ctacgcacaa gaagataacc
    26281 gctggttctc gtgggtctct ttcaatggca ctaacattga cgacagcaat cagcaggcat
    26341 ttgcacggaa atatagccgg gcggcaggca atgtcgatga ccagatcaac cgcgtgctca
    26401 atgcactgct tgattctggc aaactggaca atacggttgt gattatcact gccggtcggg
    26461 gtattccgct gagcgaagac gaagaaacct ttgactggtc ccacggtcat ctgcaggtgc
    26521 cattagtgat tcactggcca ggcacgccgg cgcagcgtat taatgcgctg actgatcata
    26581 ccgatctgat gacgacgctg atgcaacgcc tgctacatgt cagcacacct gccagcgaat
    26641 attcgcaagg tcaggatttg ttcaaccctc aacgccgtca ttactgggtc actgcagcgg
    26701 ataacgatac gctggcaatt accaccccga aaaagacgct ggtgctgaac aataacggta
    26761 aataccgcac ttacaactta cgtggtgaaa gagtgaaaga tgaaaaacca cagttaagtt
    26821 tgttattgca agtgctgaca gacgagaagc gttttatcgc taactgatta attataaatc
    26881 agttagcgaa atatcttact tgcaatcggt gtggaaaacg gtagtattag cagccacgag
    26941 tcggcacgta gcgcagcctg gtagcgcacc gtcatggggt gtcgggggtc ggaggttcaa
    27001 atcctctcgt gccgaccaaa tcgcccaccg gataccaccg gaattaacag tttttagaca
    27061 cgaaaagccc gctaatcctt aattagcggg tttttttatg gtttttagtc accggacatc
    27121 accggattta taagctatca gccggatttt ttagttatac gcttagttat acgggcttgc
    27181 gtataactaa agccgtataa ctaaaaccct gttttttcgt gtggaatcat atacatatgg
    27241 cgagaaaaac acccccatta accacggtgc agatcaaagc agccagacca gcggaaaagg
    27301 aatacaccct acaggacggc ggagggcttt ttctcctggt caaaccgtcc ggatcaaaac
    27361 tctggcgatt ttcctactac cggccatcgg acaaaaaaag aatattgctg agttttggat
    27421 cgcttgatga tgtttccctg gctgatgcca gaaaacgccg tagcgagtac agagcgttaa
    27481 tcagtgccgg aactgacccg cagggccatg agaagaaaaa acgagaggca gaggcccgaa
    27541 gacaagggaa cacgttcgaa aatgtggcgg cggcatggta ccaggtgaaa atcagccaga
    27601 atctggcccc caacacgatt aaagacatct ggcgttcgct ggataaatat gtattcccgt
    27661 tcatcggcaa cacgccaata gataccctca ccgcccgaag gttcgttgaa gtgcttacac
    27721 ccatcaagga gcgcggcaac ctggaaacac tcaagcgggt tttacagcgc gttaatgagg
    27781 taatggatta cgccgccaac agtgggctga ttgatgccaa tccggctatg aatgtgcgta
    27841 aggcgtttcc ctcacctgta aaaaaacata tgccaacaat ccgccccgaa cagctgccgg
    27901 agcttatgca ggctttatca gtatcggcaa cagaacggca gaccagatta ctgattgaat
    27961 ggcagttact gaccgtaacc cgtcccgccg aagcgtcatc aacgcggtgg gatgaaatca
    28021 acctggacgc gaagcaatgg acgatacctg ccggacgcat gaagatgcgc agggatcacg
    28081 ttatcccgct ttccggtcag gctatggcgg tgctggaggc catgaaacca atcagccacc
    28141 accgcaatta cgttttccca agtctgaaag acccacagca gccgatgaac agccagacag
    28201 ctaacgcagc attgcggcgt atgggattcg ctggcgtgct ggtgtctcat ggattacgcg
    28261 ccatattcag cacagcagcg aacgaggaag gattcgagcc ggacgtaata gaggcggcac
    28321 ttgcccacgt cgacaccaac gaagttagac gggcatacaa ccggagcaac tacatagaaa
    28381 aacgcatcgt gctgatgcgc tggtggggcg aatttgtcga ggctgcggcg acgggcgtaa
    28441 ccctcgccag tggtaaaagg ggtatccgag ccgtgtagct gtacagaaaa ccagtaaaaa
    28501 ctacgaaaac catgtaaaac cgtcgtataa ttgcatcaaa tttaacgaca aggccgtgaa
    28561 acatgaaacc gttaagatgc aaaaaaatat cagatgcaat tgcgacgggc tgcaactggc
    28621 cctgatggtt cagcatgaat tttggtcaac ctacgatccg gaggacagaa cgacggcccc
    28681 atcaaaaaaa caggtagtag attttctggt atcccgtggc gcttccagaa atctggcggt
    28741 aagtattgat aaggtcgtac gtccggcatc tatgaagatc ggaggcaggc ccaaaaaatg
    28801 gcggtaacaa tcctggaagc ggcagaaatg ccgctttttt tataattcca tttcaaatca
    28861 tcaatataaa aacggtggga actgttttta cccatatccg atgatttacc gtatttgtca
    28921 ccggaataca ccggattcac aaggtaaatc acgatggaag caatcagaaa aattatcttt
    28981 cgccaggaag taaaaaaaat tatccacatc aaggcagaca gcacgctgca aagcatgatc
    29041 aacgccggag aatttccgca gggttttcgc gttggtttac gccgtcgcgg atggtatgag
    29101 gatgatgtgt tggcctggca gaaagaacgc gaacaggaag cacgcggaac ggctgcttaa
    29161 cgggtatcac agatatgaca aacacgaaaa aagcggcccc gatatggagc cgcctttctg
    29221 aacaattaac ccgctgcgcc ttatgtgtat atgatcccaa acataagcac ggggatgata
    29281 gccgctatca ggctggtggg caatgcaatc agtctggttc agttcgttgc catacctgca
    29341 atgagcgctt ttccctatac tctttaagga attgctcaag ggcaaaagca catggtgcga
    29401 atctttctga ttcatgctct atctttctgc gccgtctttt ccgtgccggt gataatgttt
    29461 tggtcaattc tttatcggtc attgtgttgt cctgcatagc aatgcgccgt aatacctcac
    29521 accacggcgc tgatagtttt tatcctttgg gttctatgcc gcgccgcttt agttcagtgc
    29581 gccccaactc tttaagccag ttggctaggc ttatgccgtc gctctgtgct tctttgtcga
    29641 attgctcttt tagctctgga gaaattcgca ttctgaattg tggggattgc ccgtcccctt
    29701 tagggctttt atcgcgtttg attattgaca agtggtcacc tattgaatta gcctttccat
    29761 tgttaggtgg ccaccttaac acaagagcac ttaaaaaagc aaagccccgc aagtgtcatt
    29821 accactcgca gggcttctaa ccaacaacgt aaactaggag ccgttatggt tgccgtaaat
    29881 catataccac accttgtaca cacacaaacg gcctttgtgt ggcgttttct ggccctgagt
    29941 gccggagaat ctcaaatcat ccacgtaacc gcctggacgg aacgcgaagc gcgtagccgt
    30001 tgcccgtccg gttgtgttgc tgtattcgcc gcccgtattc gtcaggggga aacctatgca
    30061 caataaaacc acaccgaacg cagcagccgc cgcactcact acgctgatgc acgcgcttat
    30121 tgatattgaa tgcactgcag agcttgcgca gggagaagaa cagaaagacc ggacacagtt
    30181 cgccctggaa tgtatccgat acatcgcaac gcggtcgctg aatgacgcta aaaatattct
    30241 tgttgctgat tgtgaaaatg gggggggtta tgcgtgatga tcgttttaat tccctgaaac
    30301 aggaatttcc cggcgttcct gatgatgcgg ctgatgcgct ttcgtcaatg ccagaactta
    30361 ttagagcggc ttttttctta ctttccacga gagaatataa atcaacgggg cttgatgtac
    30421 tgaatatcgc cgccgattat gcggaatatg tggcagaggc gcgttacaga agaaaatttc
    30481 ctgaggatgt aagccatgcg tgatatttac cacgaaacaa tagaccgcgc atttcttgca
    30541 ctttctcaca gtgaaaacat gctggaaata ttgcgcatat ggcttgaaac acttggcgac
    30601 aatgaacgcg acaaacaaaa atcaagaatt gccacggcat taataacgct tcttgagcct
    30661 gtaataatgg aactgcaaga aatagatcta ttgcacgaca gatataaaga acagcacacc
    30721 ggagaataaa aataatgaaa cttaaatatt ctggcttaac tgccagtggc aacactcacc
    30781 ctaaatttac gcgcggtgat atttaccgcg accagtacgg cggcacggta atgattaagg
    30841 gcgtggaaga acggcgtgta acctaccgcc gtgaaggtta cgaatatgat tgcgtgatgc
    30901 ctgtttatca gttccggcgt gatttttctc tggtacagac cgcgccgcat aacgtgccca
    30961 ccagcaacgc cagggcacgg gcaaacatcc agaagctgaa aaccatgatt aacggattca
    31021 ggggcaagaa atgaaaagcg caccgaactt aaaaaaacag ccttacgaca agatgaccga
    31081 agtcattatt tttgcgggta gtgatgcctg ggcacatgcg aaacagtggc aggaacagga
    31141 cgggcgactg gctggcgata atgtgcctcc cgttgtgctg gctgatgatc aactggatga
    31201 actggcagac ctgagaatca tcgacgaggg gcgctattgt gtccggctgt acaaggcagg
    31261 ccacatcagg ccatcaaata ttaatgccat tgcgcacaag ctggcggcgg cgggtgtaac
    31321 tgatgcgaat tattaccccg aagggatgca cagccatatg cgggagaact ggcgcgaata
    31381 cctggaacgg gtgcgcggga aagagccggt ggaagaaaaa aaccaccagc gaaaaaccac
    31441 gctaccgatg agcgttggat ctaccggata cgacacgcaa ctggattacg tggttaaggg
    31501 gattattccg gcggtatcgc tatgcagcat atacggggct agcgggtcct ataaatcatt
    31561 ccttgccgga tcgtgggcgt gccatgttgc cactggtcgc cagtggggag gccgcagggt
    31621 tgcacatggt gcggttctct atgtggttgg tgaaggcggt atcggcgttc cgcgtcgtgt
    31681 aaaagcctgg gaggttgtgc acgatgagca ggtgaaaaat ctgtatctgg taaaccgccc
    31741 catctttccg gctgccccgc ttgatgttga tgaaatggtt atcgctgccc gtcaggtgga
    31801 gcgggaaacg ggtaaacctg tacgcatgat tattctggat acgctggcgc gttgctttgg
    31861 tgggaatgat gaaaatgatt cccgtgatat gggggcgttt atccgtggtt gtgacgaact
    31921 gaaacgacgc acaggggcca cggtgctggt ggttcaccat tccggcaagg atgagacgaa
    31981 aggcgcgcgc ggttccagtg catttcgtgc ttcgctggat gctgaatacc ggatacgcag
    32041 ggaggacgca ggaagcgaag cgctggttat ctcatgcacc aaaatgaagg acgcggagga
    32101 actcaaagaa gccgcatatg acttacgcgt ggtggagctt tttaccgacg ctgacggtga
    32161 attaatcacg tcgctggtgg tggtggatga tccgcgccct cctgttgaac tggagcgcat
    32221 cgaggaggca gggaacaaga cggaaaacca taccgcgcta tgggggtgca tccgttcacg
    32281 cacacagaac ggcgacaagt gcacgatccc gctgttacgt gatgacatga aaaagctggg
    32341 gtatgaaatg aaaaacttcc ggcgctggct gtacaagctg gaaaaagatg gggttattag
    32401 tatcgatggg gatgatgtag cgccgctata aaagtgagga gcaaaagcga gggggataga
    32461 aagagggcca aaattagccc gctctccctc acttttcgac ctgtatacat cctcaaaagt
    32521 gaggggtaaa aaatacttat aaaacacaca catagaaaaa ccgaaaatcc caactgcgac
    32581 gaagtgagac gcttgaaaaa gtgaggcgaa aaagtgagag gttgcgagaa atgacccaaa
    32641 aacgcagaga cagaacagag ccaaaatata aagcgttaga catgactgag cacaccttaa
    32701 aggtggcaat cagaacgata gaccgccaca cgcgggaagg atacgcgaag gaacatcccg
    32761 acctgataag cgcattcatg accacggcgg cggcaaactt tgccacgctg acagaacggg
    32821 agattgccga agcggaacag gtaacaacca tcaacgttaa aaccggagag gtggaattat
    32881 gacggcacag atagccgctt acgggcggct ggtggacgac ccgcaggtaa aacagaccag
    32941 caagggcaca ccgatgacgc tggcgcgtat ggcggtatct ttgccatgca gccaggcaca
    33001 ggacggacag gcgacgttat ggttatcggt catcgcattt ggcaaacagg ccggcttcct
    33061 ggctaaacat caaaaaggcg atgttgccag cgtatccggc acgatgcagg taagccagtg
    33121 gaccggacag aacggagaaa cgcggcaggg ctggcaggtt atcgcagaca gcgtaatcag
    33181 tgcccgcgcg gcacgtccag gcgggaacag acgcaaaacc acaggcacac agggtaatca
    33241 gccaccagcg ggaggcgatg acccttacgg tgatgatatt tcgttctgag ggggtgacga
    33301 tggtacatga ccgcatagcg gaggaactgg aggcgaaagg cttttaccgg agggcggcgg
    33361 cgcgatgggg tgaagtcatg cagctggtgg agacagacaa ggaacggcat cacatcacga
    33421 tgcgacggct ggaatgttca aggaaggcac agagggcacc ggagccgccg gataatttcg
    33481 gagacctgaa aaaggcagtc gatcgcactt atgccgaaat gggtatagat ggtgctggtg
    33541 atgaaatatg gcgcaattac caggacagct aatcaaacag ccggagaaat ccggcttttt
    33601 tgcgcccaaa aaaagcccga taaggtcaga gggttcttat cgggcttttg catatgaggt
    33661 ttttggatgc actggcgttc gtgatcggga taatcatttc ataatttgca acataactca
    33721 atattattgc ataaaatgca attctgatta taatcaggac tggataaaca tccagttatg
    33781 atttttttag tcgaagagga atttcttact atggctgaag agaaaaaagg cggtgtttcg
    33841 gtgtacataa gccccgaaat cgtggaggtg ctcaagcagc gccacaaaaa aaactatgag
    33901 gctggcgtgg cggctggact ggatccgctg atgacgccgg agccgtcgat aggttcactt
    33961 gtacgctctt atttacttgc ggcgcttggg atgcataaaa attatggggg tgaataatgg
    34021 caggcaaagc aacggcactt aacactaacc agctttttat gtacctgaat cgcggggata
    34081 ttgcggattt taaattcagc cctctgttta ccacgctgtt tttcccgaac gtggcgacat
    34141 tcagcacgca aaacatcatg ctggataccc tggacattga agaagtcacc atgtcggcgt
    34201 tttgttcgcc tatggtgggt agccaggttc agcgcgataa agggtacgaa accagcacaa
    34261 tcaaacctgg ctacatgaag ccaaagcacg aaatcgatcc aacgaaaacc atcatgcgca
    34321 tggctggaga agatccggca cagcttaacg accctaccta tcgccgtatg cgcctgatta
    34381 ctggcaacat gcgccgccag ataaacgcca ttaaggcacg cgtggaatgg ctggcggtga
    34441 atgcggtaac gaccggaaaa aacatcattg agggcgaagg catagaacgc tatgaaatcg
    34501 actggaagat accggaaaaa aacatcatag agcagtccga cggcaaaaaa tggtccgagc
    34561 atgataaaga tatttacgat ccaatctatg acatcgaact atacgcagat caggcaggtt
    34621 gccccgccaa cgtcatgatt atgggcgctg aggtatggcg cacgttacgc agctttaaaa
    34681 aattccgtga actgtacgat ctttcccgtg gttcagaatc cgccgcagaa atggcctgta
    34741 aaaacctggg cgaagtggtg agctttaaag gctatctggg cgatattgct cttattgtct
    34801 attccggcaa atacactgac agcgacggca ccgaaaaata tttccttgag cctgatttgc
    34861 tggtcctggg caacaccaac aataaagggc tggtggccta tggtgcgatt atggatcagg
    34921 aagcggtaag aacgggcgca acgcaaaaca tgtactaccc gaaaaactgg attgaggacg
    34981 gcgatccggc gattgagtac gtgcagacac acagcgcacc gcagccggtt ccggcagata
    35041 ttcgcaaatt tgttaccgtc aaaattggtt aacgggggat tatatggaca ctccatatat
    35101 tgagttattt gcaggcagtc agcaggtatc aacgacactg gtacattttg ccgctgatgc
    35161 tggcgttatt caggaattta ccccgctgat gctggtggac aatggcgagt ttaagccgtg
    35221 ggatggtcag gaatctggca aggctgttta tctgacttcg tacctcgtgg acacgtcaaa
    35281 gcagaaatca gcacagtgtt acaagacggg gatattcaat attgccgccg ttaactggcc
    35341 tgagagcgtc gacaccgatg cgaaaaaatg cgccgccttt gcgggttctg gcgtatccgt
    35401 tcagccgctg gcccgataag cagggggaac gatggcaacg aatgaaagca tcatggcgct
    35461 accgctggcg agtaaattta aagccgaagc gcgggcaatg gctgacagag gtttatcaac
    35521 ctacgaggcc gtatatcaac tcaacaaact ggaagagcag gacaagccgc gcgctgatgc
    35581 gattatggcg cttcatgagc ataaagacta tcagccgctg ttgcgtgcaa tggcaaacgt
    35641 gccttgtatc gatgttgata cggctaaaaa catcctgaac atgaccatag agcaggaacg
    35701 cccgaaggtt gcaccagagc ttaccgcagc ctttgaaaac tttatggaca tgcacagccc
    35761 acaaaccgta tcagctggca tggcatacga tggcagaaac ccaggcgatg acggcgacat
    35821 cgatcgcata ctgaaaacca tctgagacaa ggccggagaa atccggcttt tttgcgggtc
    35881 cttcctggaa ttatggcccg ttacggggcg gcgacctcgc gggttttcgc tatttatgac
    35941 gtttttccgt gaaggtgaca ccaccaccac ttgattaata tttaaccatg cagttaaggt
    36001 aacattatga ttgataaagc ttgttttgta agtcagcagg aaatagctga acatttcaag
    36061 gttaacagaa ccactattcg cgcatggacc aaacagggga tgccgtatct taatgcggat
    36121 cgcggaaagt ctggcggtta tcacatcggg catacattgc tttggtcttc aggtaaaagc
    36181 cgtcttgagg ccatcagata tcacgtagaa accagtgcgc tggaaaaaat tatgtttgcc
    36241 aggctgcttt catctgagcg tgacgagtac tccagtgaag aaacagaaca tcgatttgat
    36301 gaaggtttgc agatttacgg ctattcaccg gaagatgtga gcaaggcacg aaataaaatg
    36361 gctggctttc tggctgggtg gcgtcatgcc gtaagcgttc gccgtgccag catggagcaa
    36421 tcagccgata cagaacagta aagccgataa cttgttaatc actcgcagca atgcatgtga
    36481 tttgtgcaca ctttcggtta actggttcga tgtccggttt tagtgtctgt tttttgcgca
    36541 tgtccggttc atggaaagca tgtttttata tttttcatat ggttaacttg tagagaaacc
    36601 ggacatggat cccgaaaaat tttcataaat agtgaaaacg cgcgaggtcg ccgccccgta
    36661 acgggtccat aattccagga aggacccgac gacaccagac aatcagaacg ataggtgcac
    36721 aatgacagaa gccgaaatac tgggattaat ccgccgtgct ggtggaatca gccagcagac
    36781 tgacgaacag gccacgcagc cggacagcgt gacagccgaa aattatgcgc gtgttgttgc
    36841 tgaggtgatg cgccgtgatg gtatccagct taatgatgtg gatatgcgca acatacggat
    36901 ccgcgttctt gaaatgctgg cctacaatcg ccgcgtggca ctgtatcggg aaacggagaa
    36961 aattacatac cactggaaga agccggagcg gttgcggcgg taactggttg atattttcga
    37021 aattcgccag cggcgaacat cggggaaacc agcctaaccc gttgatattt tcgggaacct
    37081 caaattgagg aggtcggaaa cataacccgt catattctgg atgctgataa ttaccacgca
    37141 gcccattaag gcctaacccg ttgattcttt cggaaacagc cattggcgta atccggcgcg
    37201 gtaacttgct gaacttaaag caaagcgcaa aattgcgctg gctggtgggc atgatgccga
    37261 tatggtgatc cccataacgg aaatatccac cagcacggca acggcagaat agccacaaca
    37321 cagaaaaacc acgaatatgg ggtttttgtt atggcatggg catgatgacc gcccctgctc
    37381 tgaatggtgg aaatcaccac gcagatcatc caccagcttc gtttttataa attaaacatc
    37441 cgggaaaatc cgaccctgaa ttgtgcattt tttcagcaaa tcattttagt tatacgtttg
    37501 gttatacggt ttaaaagttg aatcatatac attattttaa atcatgaagt tacacgctca
    37561 attaaactac tctcgtgcaa aaatcccaag aaaaaaccaa cctttacggt tggttttttt
    37621 atatctgcaa ttaatttgat aaacagaccg tgacacatca cagcctgttt attttctgtt
    37681 atcagaacgt ccagaccact cccgcctgag tattccacgg cgattctacc cctgcgccat
    37741 tgccatagct gactgacaaa tgaccgctta acgtcggggt aaacgatgac cttatcccag
    37801 cctgataaac gccaggggtt ccagccacat cattattaaa tttgccatcg tcattaactt
    37861 tcacatggtt agaatcggcg tattcctgac gtacggcggc tttcagccag ggttccagcg
    37921 tcgtaccatt ttgcaggtcc atgtgatagc ttaccgccgt tcccgcttca gcgcgtaata
    37981 tccgggtatt tcccacatca gcgcgcatgc cgtttgataa cgtgtagtcc tgaccatctg
    38041 tggtaaagcc ggtaaaggcc agatagggtc taacactcca caatccgtca acccaacgga
    38101 acccgctctc aacatgagca cccgcgccgt tactattgta atcgccaaac gctgttgccc
    38161 cattactcat cttgccatgg atggtgttgg caaaacggtc aactttcacc accccatcaa
    38221 cataggcacc gttctgatgc tcccaaccgg cataagcccc cagggtatag ctatcgatat
    38281 taccttttcc gccgcgatca aaaccaatat cagaatgaga gtaaccaaag aacaagccgc
    38341 gaattgtact gctttcttca cgggagaaac ggctatcgat accgagcgtc aggcccgtca
    38401 atgtttgctc aaaaccagct cccgcatcag tggtcacgtt gttgcgggtg ttaattgccg
    38461 aactccacat cgccgtatcg taactaacgc tttttacgct accaagacgc tcacgcacgg
    38521 tgtccagttc tgcatcaaat accagcggtt gtgcggccgc catattcagc acatcagtgg
    38581 ttgaaggggt aatttgcgcg cgattctctg ccaaactcca gctatggttg ccattatcca
    38641 gcaaggtata ttcatacgta ccgatatcaa caacgcctcc ggcattgccc aacgtaaatg
    38701 cagcatcacc gccgcccgtt gttaccagtg taaggctatc tcctgctgcc gggctggcac
    38761 cggtgtccgt cacgaatatt ttgaaatcac ctgttgcctg accggtgacg ttgagctgat
    38821 cgctctgatg attagccata tcggtacgca tataaaaatt gccgtttccc gacagggtat
    38881 tggtggtcaa cgtaatgaaa ttttccgcac ttgccgtcac tgatgaacga gtcactggct
    38941 catccatcat aatcacattt gcgtcagaca tcgcaaggtt ggctaagttg aggagggtgt
    39001 tttggttcgt cgtagtgata tcggcaatga tggcccatac gctattttcg agcgaaacgt
    39061 ccgctttgct ggtatccacg gcaccatgcg ttctaaaaga agcgccctca gaaaccacta
    39121 ccttacccac caacatagcg ggtgcataat ttatttgcgg cttcatgacc tcaagaatgc
    39181 catcattccc tctgactgac acgttaacca ttgtgccagc ccagacatta gcgcggccat
    39241 tgttgataac catattttca gagatggctt tagaggaata cgtgatactt ccattctggt
    39301 ctgatcgacc gagatcatat accgcatttg cctgcacttt cgtaccagta tcctttccca
    39361 gcgattgcat agtggcatgc tcatcaagga tagtatcaat ggcctgcgtg tcctccataa
    39421 caatgagccc ggaaccatca tccagttcat aattttttga cacaccatct tttatactaa
    39481 attggccttt actgtttgta ccactcactt ccagcgcatt cgttgagaca attaattttc
    39541 cgcctgcttt tttatcaacg ccagttgcag tcccgccatc cataacctcc agtaagccgc
    39601 cactatctac agtagtatta taagcgaagt cattttcttc aactcgcaaa cttccgccgt
    39661 tttccaacag catattgtta gcaataccat tcttgatttc gaactgaccg agacggtttg
    39721 ttccgaatgc ctccatgacc cgcgtgcttg ctttaatagc accgcctgct ttctgatcta
    39781 ccgcaatcgc taatcccccc tctttaacct ccagtaatcc tcccttttcg atagcggcaa
    39841 ggacggtaat cccatctttt tcaacgatta agcgcccgcc tttaatcgtg ggatcattcg
    39901 ctgcgccata aacctgtagc acaccattat tgagggtagt ctggtttgcc gcgccaccca
    39961 tttgaacaat ttgataaccg tcatttaata ctgagtattc tgcggtacca ttcatttcaa
    40021 tgtactgata ccctccgt
//
LOCUS       DADMIB010000016        39778 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.016, whole genome shotgun sequence.
ACCESSION   DADMIB010000016 DADMIB010000000
VERSION     DADMIB010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 39778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39778
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.016"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            5..436
                     /locus_tag="JNZ89_000852"
     CDS             5..436
                     /locus_tag="JNZ89_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934804.1"
                     /translation="MALNLASGEGNFFIRPGGVFYVAGDKVGIIRLDAFKTSKEIQFA
                     VQSGPMLLENGVINPRIHPNVASRKIRNGVGINKQGNAVFLLSQQATNFYDFACYAKA
                     KLNVEQLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG"
     gene            519..1421
                     /locus_tag="JNZ89_000853"
     CDS             519..1421
                     /locus_tag="JNZ89_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HAY8934805.1"
                     /translation="MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGV
                     AFGVDHNLKIFDLTHEIPPYNIWEGAYRLYQTASYWPQGSVFVSVVDPGVGTDRKSVV
                     LKTKSGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTG
                     ARLASGAITFEQVGPELPAKVVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDEL
                     LNQAEIKLNDTLCVTISEGSQQKYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNM
                     DNFAQKHQVASGADWNIDVKKCAK"
     gene            complement(1466..3628)
                     /gene="uvrD"
                     /locus_tag="JNZ89_000854"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             complement(1466..3628)
                     /gene="uvrD"
                     /locus_tag="JNZ89_000854"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HAY8934806.1"
                     /translation="MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIA
                     WLMSVENCLPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
                     MDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
                     SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
                     VDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAET
                     IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV
                     NRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
                     SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
                     AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
                     LEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTMHSAKGLE
                     FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
                     VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG
                     EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV"
     gene            complement(3712..4428)
                     /gene="yigB"
                     /locus_tag="JNZ89_000855"
     CDS             complement(3712..4428)
                     /gene="yigB"
                     /locus_tag="JNZ89_000855"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase YigB"
                     /protein_id="HAY8934807.1"
                     /translation="MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHP
                     ALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAM
                     INFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHG
                     RSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTW
                     DSRLLPHLEISRLASLTSLI"
     gene            complement(4428..5324)
                     /gene="xerC"
                     /locus_tag="JNZ89_000856"
     CDS             complement(4428..5324)
                     /gene="xerC"
                     /locus_tag="JNZ89_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HAY8934808.1"
                     /translation="MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENG
                     LQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVS
                     APKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHL
                     DLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISAR
                     NVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYT
                     HLDFQHLASVYDAAHPRAKRGK"
     gene            complement(5321..6028)
                     /locus_tag="JNZ89_000857"
     CDS             complement(5321..6028)
                     /locus_tag="JNZ89_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HAY8934809.1"
                     /translation="MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVP
                     HPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSL
                     DDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
                     HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLH
                     EIALMLPELLERWIERV"
     gene            complement(6025..6849)
                     /gene="dapF"
                     /locus_tag="JNZ89_000858"
     CDS             complement(6025..6849)
                     /gene="dapF"
                     /locus_tag="JNZ89_000858"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HAY8934810.1"
                     /translation="MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQ
                     LLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG
                     RMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC
                     VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACG
                     SGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL"
     gene            complement(6894..7088)
                     /locus_tag="JNZ89_000859"
     CDS             complement(6894..7088)
                     /locus_tag="JNZ89_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004987677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8934811.1"
                     /translation="MKNVFKVLTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVET
                     QTQSTVPDKNDRATGMVHPR"
     gene            7551..7871
                     /gene="cyaY"
                     /locus_tag="JNZ89_000860"
     CDS             7551..7871
                     /gene="cyaY"
                     /locus_tag="JNZ89_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HAY8934812.1"
                     /translation="MNDSEFHRLADQLWLTIEEHLDDWDGDSDIDCEINGGVLTITFE
                     NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGET
                     VSFR"
     gene            complement(7911..10457)
                     /gene="cyaA"
                     /locus_tag="JNZ89_000861"
     CDS             complement(7911..10457)
                     /gene="cyaA"
                     /locus_tag="JNZ89_000861"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HAY8934813.1"
                     /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
                     HHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMG
                     STSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
                     FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTL
                     YAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
                     NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVC
                     EKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQ
                     SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
                     FIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLY
                     IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
                     RNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTIL
                     GKMHQDAAPPDSVEVFCYSQHLCGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
                     GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEG
                     IIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
                     SFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDTPLLQQYFS"
     gene            10844..11785
                     /gene="hemC"
                     /locus_tag="JNZ89_000862"
     CDS             10844..11785
                     /gene="hemC"
                     /locus_tag="JNZ89_000862"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HAY8934814.1"
                     /translation="MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTR
                     GDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICERE
                     DPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD
                     NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAA
                     LNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER
                     RGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA"
     gene            11782..12522
                     /gene="hemD"
                     /locus_tag="JNZ89_000863"
     CDS             11782..12522
                     /gene="hemD"
                     /locus_tag="JNZ89_000863"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HAY8934815.1"
                     /translation="MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLA
                     DQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQK
                     ILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQR
                     CAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERL
                     AKLARELGWQDIKVADNADNDALLRALQ"
     gene            12544..13785
                     /gene="hemX"
                     /locus_tag="JNZ89_000864"
     CDS             12544..13785
                     /gene="hemX"
                     /locus_tag="JNZ89_000864"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HAY8934816.1"
                     /translation="MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAI
                     AIALAAGVGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLK
                     QANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
                     LLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRL
                     ADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQD
                     IYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQL
                     SQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPAPAPAPAPAPA
                     PAPAPAPAPQGDTPAAAPQGE"
     gene            13788..14984
                     /gene="hemY"
                     /locus_tag="JNZ89_000865"
     CDS             13788..14984
                     /gene="hemY"
                     /locus_tag="JNZ89_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX biogenesis protein HemY"
                     /protein_id="HAY8934817.1"
                     /translation="MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGL
                     AIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQ
                     VEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
                     RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHV
                     GDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIEC
                     DDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTL
                     GQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRRDGLMLTL
                     QNNPPQ"
     gene            complement(15908..17143)
                     /locus_tag="JNZ89_000866"
     CDS             complement(15908..17143)
                     /locus_tag="JNZ89_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HAY8934818.1"
                     /translation="MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTH
                     MDDDTLEAYVRHYIAASEPQNEVAFTWQGGEPTLLGLDFYRRAVKLQAKYGAGRKISN
                     SFQTNGVLLDDKWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL
                     QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAASDGLKLH
                     APGDIQGELTEWSVRPDEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVC
                     HHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQ
                     LPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLL
                     AHGRPASDIMQAHLLVVNK"
     gene            complement(17290..17366)
                     /locus_tag="JNZ89_000867"
     tRNA            complement(17290..17366)
                     /locus_tag="JNZ89_000867"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17330..17332),aa:Pro,seq:tgg)
     gene            complement(17409..17495)
                     /locus_tag="JNZ89_000868"
     tRNA            complement(17409..17495)
                     /locus_tag="JNZ89_000868"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17459..17461),aa:Leu,seq:cag)
     gene            complement(17516..17591)
                     /locus_tag="JNZ89_000869"
     tRNA            complement(17516..17591)
                     /locus_tag="JNZ89_000869"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17556..17558),aa:His,seq:gtg)
     gene            complement(17650..17726)
                     /locus_tag="JNZ89_000870"
     tRNA            complement(17650..17726)
                     /locus_tag="JNZ89_000870"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17690..17692),aa:Arg,seq:ccg)
     gene            complement(17829..19214)
                     /locus_tag="JNZ89_000871"
     CDS             complement(17829..19214)
                     /locus_tag="JNZ89_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8934819.1"
                     /translation="MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
                     VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
                     VGISEITAVGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT
                     IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVEL
                     IGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNESGSNGSPFVLTFA
                     KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVA
                     GVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAA
                     IASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGL
                     NRHGKAHKLEE"
     gene            complement(19405..20145)
                     /gene="rffM"
                     /locus_tag="JNZ89_000872"
     CDS             complement(19405..20145)
                     /gene="rffM"
                     /locus_tag="JNZ89_000872"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HAY8934820.1"
                     /translation="MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAI
                     NAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMA
                     RAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASG
                     AQIVTVAMGSPKQEIFMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWL
                     YRLLSQPSRIKRQLRLLRYLRWHYTGNL"
     gene            complement(20148..21500)
                     /gene="wzyE"
                     /locus_tag="JNZ89_000873"
     CDS             complement(20148..21500)
                     /gene="wzyE"
                     /locus_tag="JNZ89_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen assembly polymerase"
                     /protein_id="HAY8934821.1"
                     /translation="MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFL
                     LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPR
                     RPLFTMNRVETNLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKR
                     FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
                     IIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLA
                     LLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTREVLNNHSGLAIS
                     PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIF
                     NMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLRTQVEG
                     "
     gene            complement(21497..22576)
                     /gene="rffT"
                     /locus_tag="JNZ89_000874"
                     /gene_synonym="wecF"
     CDS             complement(21497..22576)
                     /gene="rffT"
                     /locus_tag="JNZ89_000874"
                     /gene_synonym="wecF"
                     /EC_number="2.4.1.325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HAY8934822.1"
                     /translation="MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDD
                     GLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPS
                     QFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL
                     LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVP
                     MGYPPNNEAYIEEVRQAGLELFSEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQG
                     IGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKN
                     TIAFFSPNYLQGWQRVLAIAAGEVA"
     gene            complement(22573..23823)
                     /gene="wzxE"
                     /locus_tag="JNZ89_000875"
     CDS             complement(22573..23823)
                     /gene="wzxE"
                     /locus_tag="JNZ89_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid III flippase WzxE"
                     /protein_id="HAY8934823.1"
                     /translation="MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFR
                     QLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAA
                     APISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGV
                     LAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLS
                     KFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYL
                     LPTLSRLTEKRDITREVVKSLKFVLPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLF
                     AWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEVSQFTLLMVFAHWLIPAHGALGAAQ
                     AYMATYIVYFSLCCGVFLLWRRRA"
     gene            complement(23825..24955)
                     /gene="rffA"
                     /locus_tag="JNZ89_000876"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(23825..24955)
                     /gene="rffA"
                     /locus_tag="JNZ89_000876"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HAY8934824.1"
                     /translation="MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRF
                     GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRP
                     DTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST
                     YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFR
                     GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGR
                     IELPSIPDGCVQNAHMFYIKLRDIDDRSALINFLKEAEIMAVFHYIPLHGCPAGEHFG
                     EFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS"
     gene            complement(24960..25634)
                     /locus_tag="JNZ89_000877"
     CDS             complement(24960..25634)
                     /locus_tag="JNZ89_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-fucosamine acetyltransferase"
                     /protein_id="HAY8934825.1"
                     /translation="MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRV
                     QAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASA
                     AFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNA
                     TDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVEST
                     AYWLYR"
     gene            complement(25612..26493)
                     /gene="rfbA"
                     /locus_tag="JNZ89_000878"
     CDS             complement(25612..26493)
                     /gene="rfbA"
                     /locus_tag="JNZ89_000878"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HAY8934826.1"
                     /translation="MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA
                     GIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLVQAFIIGETFLNGEPS
                     CLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDQERFGVVEFDDNFRAISLEEK
                     PKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRG
                     FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKT
                     GYGQYLLELLRARPRQY"
     gene            complement(26512..27579)
                     /gene="rffG"
                     /locus_tag="JNZ89_000879"
     CDS             complement(26512..27579)
                     /gene="rffG"
                     /locus_tag="JNZ89_000879"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HAY8934827.1"
                     /translation="MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL
                     APVAQSDRFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYG
                     NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPN
                     KPHGVVHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN
                     ESWWKQVQDGSYQGERLGLKG"
     gene            complement(27579..28841)
                     /gene="wecC"
                     /locus_tag="JNZ89_000880"
     CDS             complement(27579..28841)
                     /gene="wecC"
                     /locus_tag="JNZ89_000880"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HAY8934828.1"
                     /translation="MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR
                     GEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAA
                     RSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER
                     VLPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSF
                     RDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
                     QNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNI
                     DDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVM
                     LVDHSQFKVINGDNVHQQYVVDAKGVWR"
     gene            complement(28838..29968)
                     /gene="wecB"
                     /locus_tag="JNZ89_000881"
     CDS             complement(28838..29968)
                     /gene="wecB"
                     /locus_tag="JNZ89_000881"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312746.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HAY8934829.1"
                     /translation="MKVLTVFGTRPEAIKMAPLVHALAKAPFFEAKVCVTAQHREMLD
                     QVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLAT
                     SLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN
                     VADSRIFITGNTVIDALLWVRDQVMSSDTLRSELVANYPFIDPNKKMILVTGHRRESF
                     GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPF
                     VWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVE
                     EVTRLLKDENEYQTMSRAHNPYGDGQACSRILEALKNNRISL"
     gene            complement(30024..31070)
                     /gene="wzzE"
                     /locus_tag="JNZ89_000882"
     CDS             complement(30024..31070)
                     /gene="wzzE"
                     /locus_tag="JNZ89_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA polysaccharide chain length modulation
                     protein"
                     /protein_id="HAY8934830.1"
                     /translation="MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA
                     LAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK
                     EFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS
                     VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA
                     IYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP
                     AFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG
                     LIGAGVALTRRCSK"
     gene            complement(31082..32185)
                     /gene="wecA"
                     /locus_tag="JNZ89_000883"
     CDS             complement(31082..32185)
                     /gene="wecA"
                     /locus_tag="JNZ89_000883"
                     /EC_number="2.7.8.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HAY8934831.1"
                     /translation="MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQ
                     GLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRAT
                     IQAAVGIVMMVFGKLYLSSLGYIFGSWEMVLGPFGYFLTLFAVWAAINAFNMVDGIDG
                     LLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
                     GSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
                     RQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLY
                     GYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK"
     gene            complement(32425..33684)
                     /gene="rho"
                     /locus_tag="JNZ89_000884"
     CDS             complement(32425..33684)
                     /gene="rho"
                     /locus_tag="JNZ89_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HAY8934832.1"
                     /translation="MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAK
                     SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
                     PPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
                     VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
                     MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
                     VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
                     FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
                     IDAMEFLINKLAMTKTNDDFFEMMKRS"
     gene            complement(33769..33870)
                     /gene="rhoL"
                     /locus_tag="JNZ89_000885"
     CDS             complement(33769..33870)
                     /gene="rhoL"
                     /locus_tag="JNZ89_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rho operon leader peptide rhoL"
                     /protein_id="HAY8934833.1"
                     /translation="MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR"
     gene            complement(34011..34340)
                     /gene="trxA"
                     /locus_tag="JNZ89_000886"
     CDS             complement(34011..34340)
                     /gene="trxA"
                     /locus_tag="JNZ89_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017375425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HAY8934834.1"
                     /translation="MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD
                     EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKE
                     FLDANLA"
     gene            34471..35736
                     /gene="rhlB"
                     /locus_tag="JNZ89_000887"
     CDS             34471..35736
                     /gene="rhlB"
                     /locus_tag="JNZ89_000887"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HAY8934835.1"
                     /translation="MSKTHLTEQKFSDFALHPKVVEILEKKGFHNCTPIQALALPLTL
                     AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHA
                     DAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
                     VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEY
                     IEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHL
                     AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
                     DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTD
                     LPKPLRLTRPRTGNGPRRTGAPRNRRRSG"
     gene            35870..37354
                     /gene="gppA"
                     /locus_tag="JNZ89_000888"
     CDS             35870..37354
                     /gene="gppA"
                     /locus_tag="JNZ89_000888"
                     /EC_number="3.6.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine-5'-triphosphate,3'-diphosphate
                     diphosphatase"
                     /protein_id="HAY8934836.1"
                     /translation="MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAA
                     GLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQE
                     ILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSL
                     SMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQAL
                     QEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIF
                     TELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVA
                     ANFFDQVEKEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPA
                     QKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMT
                     LQANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH"
     gene            complement(37401..39422)
                     /gene="rep"
                     /locus_tag="JNZ89_000889"
     CDS             complement(37401..39422)
                     /gene="rep"
                     /locus_tag="JNZ89_000889"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HAY8934837.1"
                     /translation="MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
                     YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
                     ANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGER
                     DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQD
                     TNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQN
                     YRSSGRILKAANILIANNPHVFEKRLFSELGYGTELKVLSANNEEHEAERVTGELIAH
                     HFVNKTQYKYYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV
                     LTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGY
                     EALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQL
                     FSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFP
                     YVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
                     EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK"
BASE COUNT         9870 a        10810 c        10057 g         9041 t
ORIGIN      
        1 gaaggtggcg ttaaatctcg cttcaggtga agggaatttc tttatccgtc ctggcggcgt
       61 gttttatgtt gcgggagata aagtcggcat cattcgtctg gatgccttta aaaccagtaa
      121 agagattcag tttgcggtgc agtcagggcc aatgttatta gaaaacggcg taattaatcc
      181 acgcattcac ccgaatgttg cctcgcgtaa aattcgtaac ggtgtaggga ttaataaaca
      241 agggaacgcc gtgtttttgt tgagccagca ggcgacaaat ttttatgatt ttgcctgtta
      301 tgccaaagcg aaactgaacg ttgagcagtt gctttatctt gatggcacaa tttcacatat
      361 gtatatgaaa ggcggggcaa tcccgtggca acgctatcct tttgtcacca tgatttccgt
      421 cgagcggaaa ggttaagcat tgtacactcg aggaggccag acaaactggg actggctaca
      481 cagctggaaa atcatcagat aaatgaaggg aaacaaaaat gaaaaaaacg ctcgcaacgt
      541 tatttttatt aacgtgtctg ggatcatcat ccgcctatgc ggataacgct ttgattttac
      601 aaactgattt tagcctgaaa gatggtgccg tctcggcgat gaaaggggtc gcattcggcg
      661 ttgaccataa tcttaaaatc tttgatttaa cacacgaaat tccaccgtat aacatctggg
      721 aaggcgctta tcgcctgtat cagactgcca gttactggcc gcaaggttcg gtgtttgtta
      781 gcgtggtcga tccgggcgta ggcactgacc gtaaatcggt agtgctgaaa accaaaagcg
      841 gtcaatactt cgtttcacca gataacggta cgctcacttt ggtggcacaa actctgggta
      901 ttgatagcgt ccgggaaatc gacgaaaaag ctaaccgcct gaaaggttct gaaaagtcat
      961 ataccttcca cggtcgtgac gtgtatgcct acaccggtgc acgtctggct tccggggcga
     1021 ttacgttcga acaggtgggg ccagagcttc cagcaaaagt tgtcgaactt tcttatcaga
     1081 aagcaaaagc aacaaaaggt gaagtgaagg gcaatatccc gattctcgat attcagtacg
     1141 gcaacgtctg gagcaatatc agcgacgagt tgctgaatca ggcagaaatc aaactcaacg
     1201 acacgttgtg tgtgaccatt tccgaaggtt cccagcaaaa atacgcaggg aaaatgccgt
     1261 atgtcgcaag cttcggcgat gtgccggaag gccagccgat ggtgtatctg aacagcttat
     1321 tgaatgtttc cgtggcgctg aatatggata atttcgcgca gaaacatcag gttgcgtctg
     1381 gtgctgactg gaatattgat gtgaagaagt gcgctaagta aggtgctgat gcggaatgcg
     1441 gtgtggcgca ccgcatcccg caacgtcaca ccgtctccaa ccgggcataa gccgccacca
     1501 gccatttaat accctggccc tggaatgcca cctgcaaacg gctatgttca ccgctgcctt
     1561 ccatattgac gatggtgcct tcaccaaact tagcgtggcg tacacgctgg ccgagcttgt
     1621 agccgctgtc gttctcgacc atcggcgtac ccatccgctg atggctgacc gggcggctta
     1681 ccgtggcgcg caggcgcacc tcttccacac actcttccgg cagctcgcca ataaagcgcg
     1741 acgggcgatg gtaaacctct ttgccataca gacggcgagt ttccgcgtag gtcagcgtca
     1801 gtttctgcat cgcgcgggtt acgccaacgt aggccagacg gcgttcttct tccagacgcc
     1861 cgccttcatc cagcgacatc tggcttggga acatgccctc ttccataccg acgataaaca
     1921 cctgcgggaa ctccagacct ttcgccgagt gcatggtcat cagttgtacc gcatcctgcc
     1981 aggtatccgc ctgcccttcg cctgcttcca gcgccgcatg ggataggaac gcctgcagcg
     2041 gcattaaatc ttcgtcttct tcgttgtagc tgaactggcg cgttgccgtc accagttcct
     2101 ctaagttttc gatacgcgtc tgaccttttt cgcccttctc ctgctcgtac atggtacgca
     2161 ggccggagtc tttaattacc cggtcagtct gtacatgcag cggcatatcg gcagtttcct
     2221 gcgctaaggc gtcgatcagt tccataaacc gctgtaaggc gctggcagca cgtccggcga
     2281 gggctttttc ctgcaacagt tcacgacatg cctgccagag tgttaactgg cgatcgcgcg
     2341 atgtctgacg taccacgtcc agcgtccggt caccaatacc ccgcgttggc gtattcacca
     2401 cacgctcaaa ggccgcgtcg tcgttacggt tggcaatcag gcgcagatac gagagcgcat
     2461 ctttgatttc ctggcgttcg aagaagcgca tcccgccgta aatacggtac ggcatactcg
     2521 cctgcaacag tgcttcttcc agcacacgcg actgggcgtt actgcggtag agaatggcgc
     2581 actcggcaag cgccccgccg ttgtcctgcc aggttttgat gcggttaacc acaaaacgcg
     2641 cttcatcgag ttcgttaaaa gcgcaataga gggaaatagg ctcaccgtcc gcgccatcgg
     2701 tccacagttt tttacccaga cgcccgttat tgttttcaat cagggcgtta gcggcgctca
     2761 gaatattgct ggtagagcgg tagttttgct ccagacgaat agtttcggca ccggggaaat
     2821 cattaaggaa acgctgaata ttctccacct gcgccccgcg ccagccgtag attgactggt
     2881 cgtcatcacc gacgatcatc actttgccgg tgtcgcccgc cagcaggcgg atccacgcgt
     2941 actgaatgtt gttggtatcc tggaattcgt ccaccaggat attggtaaaa cgttcgcggt
     3001 agtgttgcag gatatgcggc ttgttaagcc acaactcgtg agcgcgcagc agcagctcgg
     3061 cgaagtccac caggcccgcg cggtcacacg cttcctgata cgcctgatac accttctgcc
     3121 aggtctgctc caccggatta ccgtagcttt gaatatgatg tggacgcagg ccttcatctt
     3181 tctggctgtt gatgtaccac attgcctggc gcggcggcca ctgcttctcg tcgaggttca
     3241 tcgccttgat taggcgtttg agcaggcgta gctggtcctc gctgtcgagg atctgaaaat
     3301 cctgcggcag attggcgtcc atatggtgcg cacgcagcag acggtgcgcc agcccgtgga
     3361 aggtgccgac ccacatgccg ccctggctgg tgcccattag ctgcccgata cgatgacgca
     3421 tctccgccgc cgctttgttg gtaaacgtca ccgccataat cgagtatggc aagcagtttt
     3481 ccacgctcat cagccaggcg atacgatgca ccagtacgcg cgtcttacca ctgcccgcgc
     3541 ccgccagcac cagaaggttg ctgcgtggcg cggccaccgc ttcgcgctgt ttgtcattaa
     3601 ggctgtcgag caggtaagaa acgtccattg gcaccgccgc gtaaaaatag gttgggcgga
     3661 gaagcgcaac gccctccgcc aaaaagctgg gtatatatac agatttgctg attatatcag
     3721 cgaggtcaga gatgccaacc gggaaatttc cagatgcggc agtaaacggc tgtcccaggt
     3781 ttgcatcaga tcgccatttt ccggtctgat ccaacaggcc tgcattccgc tgcgaattgc
     3841 cccacccacg tcagtggtga gatcgtcccc aacatgtaag atctcgccga tcggcacgtt
     3901 gagtttttcc gcagccagaa agtacatatc gctgaacggt tttgagcgcc cgtgcgggcc
     3961 agcgcgcagc acaaactcaa aataatcccc caaaccaaac agttccggct gggcgttacc
     4021 gttggtgatc gccaccagcg gccatttctt cgccagctgt tttaaggtgt cgtgagtttg
     4081 ctgcgggacg tcgattcggc tgcgccattt ggcaaagttg atcattgctg cgtgtgcgcc
     4141 tgcactggct tcttcggcac tcagcccggc gtcgagcatc gcttgttcaa tcgaacgaaa
     4201 acgccagcgc gtcacgtcgt gataaatctc gggttccgct tcccgtaccg cctggcgcag
     4261 gcgttgcaga tcttcattct ggaagctgcg cagcgccgga tgataatttt gcacaaaggt
     4321 aagcgcctct cgctcggtgc gcaaaatcac cggacggtta tcgtaaaggg tatcatccag
     4381 gtcaaaggtg agcgccgaga tgcgccccaa aggccggtaa aaacgcatta tttcccccgt
     4441 ttggcgcgtg gatgcgccgc atcgtacacc gaggcaaggt gttgaaaatc aagatgagta
     4501 tagatttgcg tggtggagag gttggcatga cccagtagct cctgcacacc acgaagatcg
     4561 ccgctcgact ccagcatatg cgtagcgaac gagtgacgta atttatgtgg gtgaacgtga
     4621 ttattcagcc cttgttttat gccccattcg gcaaagcgtt tctgcacatt acgcgcggag
     4681 atacgcttgc ccagtttcga cagaaaaagc gcgtcgtctt cgctaccaaa caggtcgcgc
     4741 aaatcaagcc agtgctcaat ccacgccaca gcgttgcgac caatcggcag gcggcgctct
     4801 ttgctgcctt tccccattac ccacacttca ccagactcca ggtcgaggtg tttgatatcc
     4861 agccccacca gctcggaaag acgcagacca gcgccgtaca tcacttccag cattgcacgg
     4921 tcgcgtacag cgaggggatc gttgatatca atatccagca gccgattcat atcgtcgacg
     4981 tcgatatttt tcggcagatg acgcggcgct ttcggtgccg aaacaccttt cgccgggtta
     5041 gctttgagtt cgttctggct gaccagccag tcaaaaaagc tacgtagcgc agaaagccgt
     5101 aacgccagac ttgctgctcc cagcccttta cggcgactgc gtacagcaaa attgcgcacc
     5161 atcgtcacat cacattgctg ccagctttgc aggccgtttt cgctggcaaa attgatgatc
     5221 gcctcaagct gacgctggta gttaagcagg gttatcgggc taagctggcg ctccacgctc
     5281 agataacgta ggtagcgttc tacatcggtg tgtaaatcgg tcatacgcgt tcaatccaac
     5341 gctccagaag ctccggcaac atcagcgcaa tttcatgaag taactgcgtt ccttgccctt
     5401 gttgatagtg actggcatcg cgactggtaa acagcacgac acccaaatca gcatcgcttc
     5461 ccagcatcga catcgccacc gatcccaccg ctttcgcttc cggtagcacc accagcagct
     5521 ctggtccgtt aagcggccca agatagtgct gttcctgccc caaacgctga atacgcagcg
     5581 gttcgaaaga ctgacggctt aatgccagat gagtgtggtt cgacggcgca cctaagcgcc
     5641 agcgatccgg aaacaggcgc agactcgcac ctgccaggcc gagatcgcgc gcccagcggt
     5701 gaaagcgcat cagcatatcg tcgagactgc tggcggcggt gagactgcgc tgcaggtaga
     5761 gtaggcgata aaacaggcct tcgttggcga tagcctgttc catcaacagc gccatgttct
     5821 cttccagaac atgaatatga ttacgtgcgc gggccatgtg ccactcgacc aacgaaacgg
     5881 tgccgcgtac cggatgtggc acacgtatcg cttctactgc gcgcgcatta cggataaaaa
     5941 actcaggatt tttaatcaga taatcgacaa ccgcccggtc atcaagctcc gtgagtgttt
     6001 cctgcagttc ttcccctggt tgcttcatag atgaataaat ccgtcgtaga catgtaccgc
     6061 cgggccagtc atatataacg ggtgacccgg acctttccag gcgatatcaa gacgaccgcc
     6121 ggggagttcc acgcgtactt cttcggccag caaaccttgc tgaatcccta ctgcaaccgc
     6181 cgcacacgcg ccgctgccgc aggcctgggt ttctcctgcc ccacgctcat aaacgcgtaa
     6241 acgaatatgc tcgcgcttaa ccacttgcat aaaaccgata ttggcgcgct ccggaaaacg
     6301 ctcgtggctt tccagaacag gaccaagcgt ttctaccgcc gcggtatcga catcatcgac
     6361 ctgaatcacg caatgcggat ttcccatcga caccacgccg cataagattg tctgctcggc
     6421 ggcgcgcata atataggtct tttccgcttt gttagcgcga aacggcacag cggaaggttc
     6481 gaagttgggt tcgcccatat ttacgcggac cagatcatca tcggtgacgg tcagaaccat
     6541 ccgcccgttg gcggtgctga cgcggatatc gcgcttattg gtcagccctt tcaggcgcac
     6601 aaaacgggca aagcagcgcg caccgttgcc gcactgcgcc acttcactgc catcagcatt
     6661 gaaaatgcga tagtgaaaat ccagttcagg atcatacggc ggctcaacca ccagcagctg
     6721 gtcaaaccct acccccaggt gccgatccgc cagccgacga atcagctccg gtgaaaaaaa
     6781 gacattctgc gttaccgcgt cgacgaccat aaaatcgttg ccaaggccat gcattttcga
     6841 gaactgcatc atttactcca atcacgcggg tacagaaact gacttttagt aattcacctg
     6901 ggatggacca tcccagtggc gcgatcgttt ttatccggca ccgtggattg cgtttgcgtc
     6961 tctaccggtt tggtcggcgg cggtgcattt ttatctgcag gcgggaaata gagcggacct
     7021 ttcagaccgc agcccgtcag gctgaagaga gtaagtaata cagtgagtac cttaaacacg
     7081 tttttcatta tggattgcct gtaaagttca tcgctttctg ctttctatca tcgcaggaga
     7141 aggcgtaaaa gcaagcgttt agcgactctt tatgaagtct gaaaagtgag gaaatgctgc
     7201 gagtataacg cttactcgtg aggatttatg ttctgctggc agtttcgtga tcggcacctc
     7261 gcgccaggat ggctttatgc actatcgcaa tgtggtttgt ttgttggctt ttttagttcc
     7321 gtcagcgtga ggatgctcgc tcggtaaacc tgatcataat gtttaccaga aacagggaaa
     7381 ggcgtggtgt aactgcgccc taatgaagag acaaatcttt cgccacacag agacatcatt
     7441 attccggtga cggatgaatc atgccggaac gcagcagcag aggtgcaaac tttgaagccc
     7501 tgaccccatg ccgctatact gccgccatca cttaaaaaca ggatacaaca atgaacgaca
     7561 gtgaatttca tcgcctggct gatcaactgt ggctgaccat tgaagagcat ctggacgact
     7621 gggatggcga cagcgatatc gactgcgaaa tcaacggcgg cgtgctgacc attacctttg
     7681 aaaacggcag caaaatcatt atcaaccgcc aggaaccgct gcaccaggta tggctggcaa
     7741 ccaaacaagg cggctaccat tttgatctga aaggcgatga gtggatttgc gatcgcagcg
     7801 gcgaaacctt ctgggatttg ctggaacagg cggcgacgca gcaggcgggt gaaacagtca
     7861 gtttccgcta agattgcatg ccggataagc ctcgctttcc ggcacgttca tcacgaaaaa
     7921 tattgctgta atagcggcgt atcgtgatcc tgattggcag gcggcatgtt accgatagat
     7981 tttgtgcgga acggaatcac ctgttcacga ccatcaacct tcacaatctg atagaactgc
     8041 ggcaggttga agttgatgaa gcttgagccg taggtgaagc ggtcgtgcga tgacgagtag
     8101 aagcgactga cgtcacgcac cagttcctct ttgctgcctt cgcagtggtg atacacctca
     8161 acccggttgc tttcgtcaag aatgtagata ttaaagccat tctcgtcttg cgtttcttcg
     8221 aagaagaact ggatgatccc ttcactagca aagccgtcca ccaccgccgg taatttgacg
     8281 tgattggttt caacctgcac tgacaggccg tgcagtttgt tatgcgaaat agcgccataa
     8341 aactcgatgg cgttctccag cttctgtacc gatacattca ggcgttcgaa gaacaagccc
     8401 caggtttgac cagaaacgcg cagcgccttg aaacgcccgg tttcctggcg ggtgctggaa
     8461 aggcgcagtt caatacactc agaaaccagt tgctgcacgc gagtacggat taacccgcac
     8521 agatgctggc tataacagaa gacttccacg ctatctggcg gtgcggcgtc ctgatgcatt
     8581 ttgccgagaa tagttttcag ggcttcgatc atcgattgct cgccgttgaa gtgcagcgta
     8641 cgcacttcgt tccacgagtt gcggtacagc aggtcaacgc tacctaccag gcaattttga
     8701 ttctcgccaa agctgaagac atccagctta cggaaatcaa aatgcaccac ctgattgcgg
     8761 aacgccgctg tcgggtcata ttccaggtta acgataatcg ccagatggcg gatctcacac
     8821 gggctgtaga gcgccttcgg tgtcggtgca ggtaagcgca gcgggaaatg gtgcgacacg
     8881 tcggcgacca tctcctgcaa cttaggcaaa tcgacaatgc cgttaccttt aatatacaaa
     8941 cgggtgcgcg aggtcagcag gccgttaaac catgcccacg ccaccagttt gttcaggtaa
     9001 cggttatatt ccagcggctg atggctgatg atcgactcaa tatttggcgc gcggttatac
     9061 agataccaac ctgaacggtt agcacggccc ggcggcacat aaataaaggt cagattcggt
     9121 tccgagagat cgggtgaaat ctgcgggttt accagcgtca ctttacctgg taatgcttca
     9181 aacgcggcat acagcttacg ggtcagcacg ccgatatcct gcggactggc ggagacgcta
     9241 aggttattgc gacgcgcaaa gcggatcaga ttacggtagc tctgcatcat cgcgtcgagc
     9301 aactcgttgt gcgcctcacg cacctgatca atcttccagt tagcgcggtt atcgagcatt
     9361 gccagacgag cttcgtccca accccactcg ctcactaact ggctcaacac tgcgcgacgc
     9421 cagcctacgc aggcgcgttc acggctgagc ttttcgcaca cttttaaata gaagcagcga
     9481 cgtactaaat ccagacgggt aaaatcttca atcgccgtca ggtattcagt aacacgctcc
     9541 agcatcatgc agtatggatc gagaccaaac gatacaatct caccgtcgtg caaacgctgt
     9601 ttgatatctt tcgccagcag acgtgggttc gggtattccc aggaataggc ttccagcagc
     9661 agtgttttca gtaccgcttt gtatggggaa tcgatactct tgtagagctg ccaaaggctg
     9721 gcaccaaagt actcttcagc agaaagcgag cttaagccac cgagatccag ccattcattt
     9781 ggcgtcagca cgccctgcgc gtaaagcgtc atcacatagt cgtcgtaatg ctcttcttcg
     9841 tcgcacggca ccatattcca cagaatacgc ttaccggcga gacgcacggc ggtacgataa
     9901 aattcgtcaa gcagcagtat atgctgggtg gagccacaat cttcgccccc caagctgccg
     9961 ctttcattat gacggaagcg gttttcatca atcaggaaga agctgacttc cacacccagc
    10021 gaggcggccc agctttccag cagactacat ttacgttgta gtaactggcg ctcttcgcta
    10081 tcgagccagg attgatgaca gacccagata tccaggtcag aggaacaact ttgccctacg
    10141 gacgaggtgc tgcccatggt gtatacacca gtaattggaa gctcaccttt cggtggatcc
    10201 tgtactgaca ttccacgata cagttcaagc tcgttcaggt agtggcgttg agtttcatca
    10261 ggcgtgtaaa ggcaaatgcc tttgggaacg ttaccatcaa ggtaacccgg cattagcgga
    10321 tggtgatagt gcaacaatgt cggcagtaga ctgtagacct gttggaatgc aggccccata
    10381 gcagcaagcg cgcgatccac acgcaattga tttatggcat ccagtctctg tttcagagtc
    10441 tcaatataga ggtacaagac gtatcgcctg atttgctacc cgtcatgact gtgattccgc
    10501 caacatcaac ggtaacacgc ggcattcggg atatttcgta tgtcaaaggt aaccgttacc
    10561 acttttcgcg cctggttttt ttagtttcac gacgaaaaaa tggtctaaaa cgtgatcaat
    10621 ttaacacctt gctgattgac cgtaaagaaa gatgcgctac atacaagtgt agcaccgttt
    10681 attctctgta aattccttat tacgacggcg tgaaacgcct gtcaggatcc actgccagac
    10741 ctcattttac ggtttgcgca ggcgtctacg tttcaccaca acactgacat cactctggca
    10801 aggatgttag gatggaccac ggatgataat gacggtaaca agcatgttag acaatgtttt
    10861 aagaattgcc acacgccaaa gcccacttgc actctggcag gcacactatg tcaaagacaa
    10921 gttgatggcg agccatccgg gcctggtcgt tgaactggta ccgatggtga cgcgcggcga
    10981 tgtgattctt gatacgccgc tggcgaaagt aggcggaaaa ggcttatttg taaaagagct
    11041 ggaagtcgcg ctcctcgaaa atcgcgccga tatcgccgta cattcaatga aagatgtgcc
    11101 ggttgaattc ccgcaaggtc tgggactggt cactatttgt gagcgtgaag atcctcgcga
    11161 tgcctttgtg tccaataact atgacagtct ggatgcgtta ccagcaggca gtatcgtcgg
    11221 gacgtccagt ttacgtcgcc agtgccaact ggctgaacgc cgcccggatc tgattatccg
    11281 ctccctgcgc ggcaacgtcg gcactcgcct gagcaaacta gataacggcg aatacgatgc
    11341 catcattctt gccgtagccg gactaaaacg tttaggtctg gagtcccgca ttcgcgccgc
    11401 gttaccaccc gagatttctc ttccagcggt aggacaaggt gcggtcggta ttgaatgccg
    11461 ccttgatgat gcacgcactc gcgagctgct tgccgcgctg aatcaccacg aaactgcact
    11521 gcgcgttacc gcagaacgcg ccatgaatac ccgtctcgaa ggcggatgtc aggtgccaat
    11581 tggtagctac gccgagctta ttgatggtga aatctggctg cgtgcgctgg tcggcgcgcc
    11641 ggacggttcg cagattattc gcggtgaacg ccgcggtgcg ccgcaagatg ccgaacaaat
    11701 ggggatttcg ctggcagaag agctactgaa taacggcgcg cgcgagatcc tcgctgaagt
    11761 ctataacgga gacgccccgg catgagtatc ctggtcaccc gcccgtctcc cgctggagaa
    11821 gagttagtga gccgtctgcg cacactgggg caggtggcct ggcattttcc gctgattgag
    11881 ttttctccgg gtcgacaatt accgcaactt gctgatcaac tggcggcgct gggggagagc
    11941 gatctgttgt ttgccctctc gcaacacgcg gttgcttttg cccaatcaca gctgcatcag
    12001 caagatcgta aatggccccg actacctgat tatttcgcca ttggacgcac caccgcactg
    12061 gcgctacata ccgtaagcgg acagaagatt ctctacccgc aggatcggga aatcagcgaa
    12121 gtcttgctac aattacctga attacaaaat attgcgggca aacgtgcgct gatattacgt
    12181 ggcaatggcg gtcgtgagct aattggggat accctgacag cgcgcggtgc tgaggtcact
    12241 ttttgtgaat gttatcaacg atgcgcaatc cattacgatg gtgcagaaga agcgatgcgc
    12301 tggcaatccc gcgaggtgac gatggtcgtt gttaccagcg gtgaaatgtt gcagcaactc
    12361 tggtcgctga tcccacaatg gtatcgtgag cactggttac tacgctgtcg actattggtc
    12421 gtcagtgagc gtttggcgaa actcgcccgg gaactgggct ggcaagacat taaggtcgcc
    12481 gataacgctg acaacgatgc gcttttacgg gcattacaat aactctcata acaggaagcc
    12541 ataatgacgg aacaagaaaa aacctccgcc gtggttgaag agaccaggga ggccgtggac
    12601 accacgtcac aacctgtcgc aacagaaaaa aagagtaaga acaataccgc attgattctc
    12661 agcgcggtgg ctatcgctat tgctctggcg gcgggcgtcg gtttgtatgg ctggggtaaa
    12721 caacaggccg tcaatcagac cgccaccagc gatgccctgg ctaaccaact gacggcattg
    12781 caaaaagccc aggagagcca aaaagccgag ctggaaggca ttattaagca acaagctgca
    12841 cagcttaagc aggcgaatcg tcagcaagaa acgctggcaa aacagttgga tgaagtccaa
    12901 caaaaggtcg ccaccatttc cggcagcgat gctaaaacct ggctgctggc tcaggccgat
    12961 tttctggtga aactcgccgg acggaagctg tggagcgatc aggacgtcac gaccgctgca
    13021 gcgttgctga aaagtgcaga tgccagcctg gcggatatga atgacccgag tctgattacc
    13081 gttcgtcggg caattaccga tgatatcgcc agcctttctg cagtttcgca ggtggattat
    13141 gacggcatca tccttaagct taatcagctt tcaaatcagg tagataacct gcgtctggcc
    13201 gataatgaca gcgatggttc gccgatggat tccgatggtg aagagctttc cagttccatc
    13261 agcgaatggc gtatcaatct gcaaaaaagc tggcagaact ttatggacaa cttcattacg
    13321 attcgccgtc gtgatgacac cgccgtaccg ctgttagcgc caaatcagga tatctatctg
    13381 cgcgaaaata ttcgctctcg cctgctggtc gcagcacaag ctgtaccgcg tcaccaggaa
    13441 gagacttatc gccaggcgct ggagaacgtc tccacctggg tacgtgctta ctacgatact
    13501 gatgatgcca ccaccaaagc gttcctcgac gaggtggacc agttaagcca gcaaaatatc
    13561 tcgatggatc ttccggaaac cctgcaaagc caggcgatgc tggaaaaact gatgcagact
    13621 cgcgtgcgta acctgctggc acaaccggca gcagggacaa cggaagctaa acctgcacct
    13681 gcacctgcac ctgcacctgc acctgcacct gcacctgcac ctgcacctgc acctgcacct
    13741 gcaccgcaag gtgatactcc ggcagccgcg ccgcaaggag aataaccatg ctaaaagtgt
    13801 tattactctt tgttttgctg attgcgggga tagtggttgg cccgatgatt gccggtcatc
    13861 agggttatgt gctgatccag accgacaact acaatatcga aaccagcgtc acgggcctgg
    13921 cgatcatatt gattctggcg atggtagtgc tgtttgccat tgagtggcta ctgcggcgga
    13981 tcttccgcac tggcgcgcac acccgtgggt ggtttgtcgg gcgtaagcgt cgccgtgcac
    14041 gtaagcagac cgaacaggcg ctgctgaaac tggcggaagg cgattatcag caagttgaaa
    14101 agctgatggc gaaaaatgcc gatcacgctg aacaaccggt ggtgaactat ctactggctg
    14161 ccgaagccgc gcaacaacgt ggtgatgaag cgcgcgccaa ccaacatctg gaacgcgcag
    14221 cggagctggc cggcaatgac accattccgg tagaaatcac ccgtgtacgt ctgcaactgg
    14281 cccgtaatga aaaccatgct gcacgccacg gcgtggataa gctgctggaa gttacgccac
    14341 gccatccgga agtattacgt ctggcggaac aggcgtatat ccgcacaggt gcatggagtt
    14401 ctctgctgga tatcatccca tcaatggcga aagcccatgt tggtgatgaa gaacatcgtg
    14461 caatgctgga acaacaggca tggattggcc tgatggatca ggcgcgtgcc gataacggta
    14521 gtgaaggttt gcgtaactgg tggaaaaacc aaagccggaa aacgcgtcat caagtagcgt
    14581 tgcaggtggc aatggcggaa catcttattg aatgtgacga tcatgatact gcccagcaaa
    14641 ttatcatcga tggcctgaaa cgccagtacg acgatcgcct actgctgccg attcctcgac
    14701 tgaaaaccaa caatccggaa cagctggaaa aagtgctgcg ccagcagatc aaaaacgtcg
    14761 gcgatcgccc gctgttgtgg agcacactgg gccagtcact gatgaagcac ggagaatggc
    14821 aggaagcatc gctcgccttc cgcgcagcgc tgaaacaacg tccggacgcc tacgattacg
    14881 catggcttgc cgacgcgctg gacagactgc acaagccgga agaagctgca gcgatgcgtc
    14941 gcgacggttt gatgttaacg ttgcagaaca acccaccaca gtagttcctt ctcacccgga
    15001 ggcaagcacc tccgggacct ttctgatgca taaaaaaacg cctgctctta ttacggagca
    15061 ggcgttaaaa caggtctgta tgacaacaag tgggtgcttc actcaacgtt gtgtccatgg
    15121 tgtctgatga ggcataagcg acatctgtca gtggacgata agcaccgtaa acggctctgc
    15181 gtcattccgg agtttatgag gcactaaggc gaacataaga gatggaatga gcatctactc
    15241 gtttattatg ccacagagaa tcgggaaata acatccctta acacttgtta tgagataatt
    15301 ctgtaatcct ctttgcttcc tgagtaataa cttcctgagt gaatatttaa cctgagcttg
    15361 atcctacaca tacttattat gaatgataaa attcattcaa ttaataacac atatattaat
    15421 tgccgttaaa actaaaaaaa gcatcaataa tcaacgcgat ataataaacc tgccttacat
    15481 atcaactgcg ccagaggtag gattgaaaac gctctcctga ttttccaatt cattttctgg
    15541 ataaataaat aatttatttt tgtcactatt atttatgtaa tcatcctgtc agggagaggg
    15601 atctcaatta tcaatgctta attacgtcat cattttgatg acatgaaacc ggagcatttt
    15661 gcatggaatt ttcgttttca cccaaacttc ttgttgttgc tgtcgccgcc gctcttcctc
    15721 tcatggccag cgcagcagat accccgtcaa ctgccaccgc acgcaaaggc tttgccggat
    15781 acgatcaccc aaaccagtat ccacagaacg ctgcaattta ttgaatttgc acgatcatgt
    15841 aggccggata aggcgtttac gccgcatccg gcaatcaacc gcaggcggcc acaaaatggc
    15901 cgctatttta cttattcacc accagcaaat gtgcctgcat aatgtcactg gccgggcgac
    15961 cgtgcgccag caaatcagcc attgctttaa gatatggcgg tagatggcgg aaataacgct
    16021 gatacccggc acacaaataa ttcagccccg gtttgccgct ggcatcgagc atgaagcggt
    16081 gtttcgggca gcctccccag cacgctttta acacgttaca actgcgacac tgcgccggta
    16141 attgcttaaa tttatcttca ccaaacacct gctgttgcgg ggaatcgatc atttctgcaa
    16201 ttgtttgctg atgcatattc cccagccgat attgcggata aacatagtga tcgcaggcgt
    16261 aaacgtcgcc gttgtgctca acaatcaccg agcgcccaca ggttggctga tgatggcaaa
    16321 ccgcacccgg cgcaccgaca aaattggcaa acgcccattc gatattcatc acgaaaatct
    16381 tgccgacgtc gcgtttgatc cagtggtcaa aaatcgccac cagaaattca ccaaattcat
    16441 cggggcgcac agaccattcc gtcagttccc cctgaatatc accaggcgca tgtagtttca
    16501 gtccatcgct ggcagctgtt tcatcagcta ggcgctcgac caccggaata aactggatga
    16561 attcgactcc cgcatcgcac aaaaaatcat aaacctgcaa cggttgctgc gcgctggtgc
    16621 ggttgacgca gaccagcacg ttatagtcga catgatgttt ttgcagcagc gtcagggcac
    16681 gcatcaccag cttatgcgtt ggtctgccac ctttggtcac gcgatattga ttgtggatct
    16741 cagccggacc gtccagcgat aacccaacaa gaaaatgatt ttctgccaga aatgcacacc
    16801 atttatcatc gagcagcacg ccgttagtct ggaagctgtt acttatcttc ctgccagcac
    16861 cgtatttcgc ctgtaacttt acggcacggc ggtaaaaatc cagcccgagt aacgttggtt
    16921 cgccgccctg ccaggtaaaa gccacttcgt tttgcggttc gctggcagcg atatagtgac
    16981 ggacatacgc ttccagcgtg tcatcgtcca tatgcgtgac tggcttttcg cggtaaaggg
    17041 attgtttttc gagataaaaa cagtagtcac agttcagatt acaatcggaa ccactcggtt
    17101 tcgccatcac atgaaaagca cgcgttggaa cctgttgcag catggtcact ccttgcctga
    17161 agtcatcctt caatacgtta agggcgaaat cataccgtgg ggcaatgagt tattacgggc
    17221 gtttattgcg aagagagggt gacgaaatgc acagaaaaca aaaaaccccg ccgaagcggg
    17281 gttcaaaatt ggtcggcgag agaggattcg aacctccgac ccactggtcc caaaccagtt
    17341 gcgctaccaa gctgcgctac tcgccgaaat actgcttttt gaatttttag ttcaattatt
    17401 taaagtcgtg gtgcgagggg ggggacttga acccccacgt ccgtaaggac actaacacct
    17461 gaagctagcg cgtctaccaa ttccgccacc ttcgcattgt cacaacttct aataatgggg
    17521 tggctaatgg gattcgaacc cacgacaact ggaatcacaa tccagggctc taccaactga
    17581 gctatagcca ccactacaaa tcttgttacg cggtattact accaccgcag ctcaagcgcc
    17641 gggactaaat ggcgcgcccg acaggattcg aacctgagac ctctgcctcc ggagggcagc
    17701 gctctatcca gctgagctac gggcgcttag cgccgttgcg ggggtggata atacggactt
    17761 cccacccctc tgtctagtcc ctttttaaat aaattgcgcg tttggttacg gtttgtgcgt
    17821 tttgctgctt attcctccag tttatgcgct ttcccgtggc gattaaggcc aaaaacttta
    17881 taaatcgccg tcaccgccag cataaagatg atgccaacaa acagcgacat acgcgtatct
    17941 tcattaaagt acatgccgat caaaacgcaa atcaggaatg ccattgttac gtagttggcc
    18001 cacgggaaca ggattgagcg gaacggatgg ctggcaatcg ccgctttatg tgcacgccga
    18061 aaacgcagct ggcttatcaa tatcacaaac catggcacca tccccggaag cacgctggca
    18121 ctgtagacgt agacaaacac acgctgcgga ttgggaatga tgtagttcag gcatgagcca
    18181 attagcagaa tagcaataga tactgccaca cccgcaactg gtacgccgtg acgggaaact
    18241 ttcgccatcg ccgccggtaa ctgacggttt ttcgccagtg cgtagagcat acgtccgcaa
    18301 ctgtacatgc cgctgttaca gccagagagc gcagccgtca gcaccacaaa gttgataatg
    18361 cccgccgctg cggtaatacc gattttggca aaagtcagta cgaacgggct gccgttgctg
    18421 ccactttcat tccacgggaa gatggtgacg ataacgaaaa tcgcgcctac gtagaaaatc
    18481 aggatccgcc acagcacttt gcctacggca ctgcgcaacg tcacctgcgg attcttcgct
    18541 tcaccggcag taatgccaat cagctccacg ccctggtagg acgccaccac aatacacagc
    18601 gcggtcagga accctttcca gccacccgca aagaaaccgc catgctctgt gagattgcta
    18661 aaaccaatcg actgcccgcc attgccaaag ccaaagaaaa tcacgcccag gccaatgaca
    18721 atcatcacga taatcgtggt gactttgatc atcgcgaacc agaactcgat ttcgccgtac
    18781 aaccgcaccg ccgccagatt cgccaacgcc accagcgcca ctgcgatcaa tgcgggtatc
    18841 cactgcgcca tctccgggaa ccagaactgg acataaacgc caacggcggt gatttctgag
    18901 atccccaccg ccatccacat aaaccaataa gaccaggcgg tgagataacc aaagaacggg
    18961 ctcatataac gatgcgcata aacggcgaac gaaccggtaa ccggttcgag gaacaacatt
    19021 tcgcccattg aacgcatgat gaaaaagacg aatagcccgg cgatgatata ggccaacaat
    19081 acggatggcc cggcccattt caaggtactg gcggccccca taaacaggcc gacgccaatg
    19141 gtgcccccca gggcgatgag ttcgatatgt cgagcttcca gcccacgctg tagctctggt
    19201 ttgttatctg ccataaatcc tcgtgttgtg tttgcatgct ttccggtgtt accggttatc
    19261 gttatgggta catcgagtgt tgcgaatgtt ttcgtaattc aggagaaatg gcaaataaag
    19321 cattaaaaat ttgaatgctt tgtgtaataa aaaagcagac aggcgacgga gtgaccactc
    19381 cgtcgcttta caaagagagg aaaatcagag gttgccggtg tagtgccagc gtaaataacg
    19441 cagcaaacga agctgacgct taatgcggct cggctgcgaa agcaggcggt agagccactc
    19501 cagtcccagc gtttgccaga ttttcggtgc gcgttttacg tgaccggtga aaacatcgta
    19561 agtcccgcca acgcccatat acagcgcatc tggatgcacc agacggcagt cgcgcatgaa
    19621 gatctcctgc tttggcgatc ccatcgcaac ggtgacgatt tgcgctccgc tggcatgaat
    19681 gcgttcaaac agcgcctgac gctgctcggg tttaaaataa ccatcctgac tgccaacgat
    19741 attcacattc cactggttgc gcagtttagc ttcagtttgc gccagcactt caggtttacc
    19801 gcccacaaga aataccggcg tcccttcttt gcctgcgcgc gccatcagct cttcccagag
    19861 atcggcaccg gcaacgcggg aaacctgcgc ctgcgggtac tttttacgta ctgaacgtac
    19921 aacgctgatg ccatccgcat atttaaattc ggcagcgtta attaactccc tgacctcggc
    19981 gttatcttca atggtcagca ttttttcagc attaatggca accagcgttc cctgcttaag
    20041 ctgcccgtca gcaaacagat aatcgagggc gtgctgcata tcacgccaac caatcaactg
    20101 taagccacgc agcgtatagg tcggtgccgt ggtgttgtta ttcattgtta tccttcaacc
    20161 tgcgtccgga gcgatgattt tgtacgttta tgaatgagtc cggcgctttc aaaaagccag
    20221 tacaacagtt ttgcgatcat cagacatgcg ccgaagacca cgataaaaaa gactacgcgt
    20281 gagacaaacg aatccagccc ttcacgtgcc agcacgatca tattgaagat cgccccaaag
    20341 cagaaactgt gcaatatcgc agccttatag cgattaggct cgcggttgcc cagctcatac
    20401 agccagtcga accatttgat gatcagacca accacgatcg ccccgagcgg gatgaacaac
    20461 gcgccgccca tcaccaccag tgagcctata agcgtaggcg agatcgccag tccggagtgg
    20521 ttattcagca cttccctggt aaagtagttg gctgagttca gcaccatact cgggcgaccc
    20581 ggccacagcc aggaagggat aaagacatag aaatcgcgga caattggagc caggccctgg
    20641 aagtcgatgt tgtcgtagtt ctgcaacagc aacgccagat tctcccacgg cgagaaggtg
    20701 tcgcgagtga gatagagaaa cgtatagaac gcttcatcgc cgctcacatt cattccatag
    20761 cgttttagcg ccagccagaa catgcccaca atccccagca cgcccgccgc cgccagcatc
    20821 cacaacgaaa tccagccgcg aataatgcca ataaacagga agatagcgaa tgcgatgatg
    20881 atattggcgc gagtgccgcc gacaatcata taagtcagca agccaaaggc gaccgtgctg
    20941 acgaggaaaa acagccacgc tttgctatcc tggcgcagaa agtagaccac cagcatcgcc
    21001 gggatgaaaa agtaaaagaa gcgttttaac gccacgccgg agacttcact ggagaagatc
    21061 tgactgtagg agttaagccg gaacagcaaa aagccgttgt gcatgaagaa gatgccgacg
    21121 cttaccagcg cgatgcccat caggatcacc cacgtaagat tggtctccac gcggttcatg
    21181 gtaaacagcg gacggcgcgg tacatcagca acgcgtttgc gtaggcgggt tttgtaggtg
    21241 acatagtaaa ccgcgtagaa gcagcccgca gaaagcaacg cctgcaacaa gatttctggc
    21301 ggcgcgacac caacatcaaa gcgaaatacc agcacgctgg tcagcgggaa gccgaagaaa
    21361 aaggtgagca aaaacagcaa tgaaaagaag acattgaagt taaagcgcac acggcgaaac
    21421 tcaaaccaag tcagcgtggc aataaacagc gtgcagagca gccagaccac aaacaggcca
    21481 ctgaattgca gcagactcat gcgacctccc cggcggcaat cgccaacacc cgctgccagc
    21541 cttgtagata gttagggcta aagaaggcaa tggtgttttt atccaccgac gccaactggc
    21601 gctgcgcttc acgcacaata tcctcgttga gatcgtcggt agtaaacagc accggcaaat
    21661 gctgttccgt catatcctgc cagaacggat tttcccggtt aagcacacaa ggaatgcccg
    21721 cctgaatcag taagcaaagc gtaccaatgc cctgctggcg ggcaaaaata aagtaaccaa
    21781 gatcgcactg acgaagtagc gccagatagg cgtcaaattc cagtttttcg ctcaaaattt
    21841 gcagattttc ttcgctgaat aactccagcc ccgcctgacg aacttcctca atgtacgctt
    21901 cgttattagg cggatatccc atcggcacca ccacttttac cgtatcgcca aattgctgat
    21961 gaacggcgcg caaggcagca atatggtcat tgctgcggtc accggagttc cccaccagaa
    22021 tggtcatttt cccttcacgt tgccgatcgt tcgccatcgt attgagagaa gggtccatcc
    22081 gcgtcgggaa gtacagcagt tcgccccgca cctttggatg cgttttggca aaaaagctca
    22141 aatcaccgcg ggtggcaaat acacagccga ctcgcttttg cgccaggcga cgtagcgggt
    22201 aaaaaagctt atatctcaag ccactggaaa gctcatacag gtctgccccc cagatatgcc
    22261 agaaaaactg gctgggctta atgccaccac tcagcagagc cagccacagt gtgggattga
    22321 actgaccgtg gaaaaaaaat cgctgctgac ggttagcttt tgctttcgcg atgaccgctt
    22381 ccgccagcga ttttttccca gggaaaaatt gcacagaaag cgccggacag ctatcactta
    22441 agccgtcgtc cttgccaaca accataaact cgcgcgcgtg ctcgctcgtc gcggccagcg
    22501 cgtcattgaa aaaccgcaaa acggttcggt tatggtgagg gatatccgat cccagtacgt
    22561 gaatcagtac agtcatgccc gcctacgcca gagtaaaaac acgccacaac aaagagaaaa
    22621 atagacgata taagttgcca tatatgcctg cgccgcgccc agtgcaccat gcgcagggat
    22681 tagccagtgg gcaaatacca tcaataaagt gaactggctg acttccgcca gaatataaaa
    22741 ccgcagtgac gctttggcga tcaccagata accaaagaca taagcgccca cttttagcac
    22801 atcacccact aactgccagg caaagagatc gcgcatagcg gtaaatttat tcgacaacag
    22861 caaccagata gcaaaatcac gcagcaacca gacggtaaaa ctcgccgccg ccactgccgg
    22921 taagacgaat tttagcgatt taaccacttc ccgggtgata tcgcgctttt ccgttagccg
    22981 cgacaacgtg ggcagcaaat atacgctgaa cgatgccgta atgaattgca ggtaggcatc
    23041 ggaaatactg ctcacccctt gccagatccc cacttcatcc cagctatact gcgccgccag
    23101 cagtttacgc atcatgatgt aagcaacagg caaggtcacc gacgtaatca acgccatgag
    23161 cgtaaatttg ctcaactgcc ctgccagacc gttatcccag ctgggtttca gatagcttaa
    23221 cgggatgaca ccacgtttga tcaacatgat ggcggcagga attaccacca gcgcgggaat
    23281 cagcgccaga cccagcaacg ccccttcata accgcccaaa cggtaactga cgtagtacgc
    23341 gagaacgcca atcaagctgc cgacaatcag cgataacgca ttacctgcgg catcgcgaaa
    23401 gcctttcatc agcgccagta acaggttgcc ccaggcgatc cccatttgca ccagcgccac
    23461 taaacgcacc agcccctgat agtcggtatt accaaacaat ccctggctga ttggcgcagc
    23521 tgccagcaca aaaaccagcg ccatcagcgt agagaaacca agtaccatcg ctgatgaagt
    23581 gccgaccacg cggcgcagct gttgcggatt atcatggtac tgggcaacgt atttggttac
    23641 accgttaaag atgccagccc cggcaagcac gccgagcacg gtaatcaact ggcggaaatt
    23701 tgccgccagc ccaagccccg ccggaccaaa tgacaccgcc agcaacttac cgaccagtaa
    23761 cccggcacca atcttgacca gtgtactggc cgccgtccac aaggacgctt ttgccaacga
    23821 catatcagga gaagtagttc aacaaagtcg caattaccgt acgctgattg acgggcgaca
    23881 ggttgtagaa cagcggcagg cgcagcaggc gctcgctctc tttggtggtg tagcgatctt
    23941 caccgtggaa ctcaccaaag tgttcccccg cagggcaacc gtgcagcgga atgtaatgaa
    24001 acaccgccat gatttccgct tctttcagaa agttaatcaa cgcgctccgg tcatcaatat
    24061 cccgcagttt aatgtagaac atatgcgcgt tctgcacgca gccatcggga atcgacggca
    24121 gctcgatacg cccggctttc gccagaggcg ctaacgcatc gtagtaattt tgccacagcg
    24181 ccagacgttg ctggttgata cgatccgctg cttccagttg cgcccacagg tatgcagctt
    24241 gcagatcgga catcaaatag ctggagccaa tatcgcgcca ggtatattta tcgacctgac
    24301 cacggaagaa ctggctgcgg ttagtgccct tttcacggat gatctcggct cgttcgatta
    24361 acgctttatc gttaatcagc gtcgcgccgc cttcaccacc cgccgtgtag tttttggttt
    24421 catggaagct aaagcagcca atatgaccaa tggttcccag tgcacgccct ttgtaagtgg
    24481 acatcacgcc ctgagcggca tcttccacca caaacaaatt atgctttttc gccaacgcca
    24541 taatggtgtc catttcgcag gccacacccg cgtaatggac cggcacgata acgcgcgttt
    24601 tgtcggtgat cgctgcttca atcaacgttt cgtcgatgtt catggtgtcc gggcgaacat
    24661 ccacaaagac gattttcgcg ccacgcagca caaaggcatt ggcggtggag acaaaggtgt
    24721 agctcggcat gatcacttca tcgccaggct ggatatcgag cagcagcgcc gccatctcca
    24781 gcgaagcggt gcaggacggc gtcagtaaca ctttggcgct gccaaaacgt tgctccagcc
    24841 actgctggca gcgacgggta aaaccgccat cgccacacag tttgccgcta cccattgccg
    24901 actgcatata gtcgagttcg gttcccacca ccggcggtgc gttaaatgga atcatgtgat
    24961 cacctgtata accagtacgc ggtgctttct acattcgcac cactttgtat gtatcgttta
    25021 agcgcggcgg tgttgcccat ttgggtcgcc acccgcaaag ttgttttacc gcgagcatac
    25081 gcccagttta gcgccgtttg catcagctca gcacctgcac cgcgtccagc cagcaggcca
    25141 attcgcgcat ctgtcgcatt gagttcccgt aaagagacat agccgcgaat atcgccggac
    25201 gccgcacgta gaatcagaca ttgatgatca aaggtgccgc gcacggcatt ttcaatccac
    25261 tgtgcataaa agcgaccgct ggcgtcaggc gcataccacg gcgcacgaaa acggctttgc
    25321 gcaaatgcgg cgctagctaa ctgacgtaat gcgggaatat cggtctcttg tgccacgaca
    25381 gcaccgctat cactgacatt gttcacgggt agcgccaaat caacttcacc ttctaccagg
    25441 gagaatccca gctgttgcag ggcatccagt tcacccgtat ttgatgccgc aattttggcc
    25501 tgcacccgtg accacggcgc taacgcgtct ggcgtcagga gcggtgcttc agacgtaatg
    25561 cgcacgatgg cgctgttaac accaaagaag gcgttttccc aggttagtgg ctcaatactg
    25621 gcgcggacgg gcacgaagta actccagcag atattggccg tagccagttt tcgctaatga
    25681 actggcagca cgcttcacac cctcgtcatc gagccagccg ttacgccagg cgatctcttc
    25741 caggcaggca atcttaaagc cctggcgttt ttctactgtc tgcacaaagg tactggcttc
    25801 aatcaggctg tcgtgagtgc cagtgtccag ccaggcaaat ccgcgcccga gcagttcaac
    25861 ggtcaggttg cccgcctcga ggtacatctg gttgatggag gtaatctcca gttcaccacg
    25921 ctccgacggc ttcacctgct ttgcgtactc cacgacttta ctgtcgtaga aataaagccc
    25981 ggtcaccgcc cagtttgact tcggctgttt tggcttttct tccagcgaga tagcgcggaa
    26041 attgtcgtca aactccacca cgccaaagcg ttcctggtcc atcacctgat agccaaatac
    26101 cgtcgcccct tccgtgcgcg ccgcaacatg acgcagcttc ggactgaagc cctgaccgaa
    26161 gaagatgtta tcgcccagca ccagacaaga aggttcaccg ttgaggaagg tttcaccgat
    26221 gataaaggcc tgcaccagac cgtccgggct gggctgttcg gcgtattcca gctggatacc
    26281 gaactcacta ccatcgccca gcaggcgctg gaaataacct ttatcttccg gcgtagtgat
    26341 gatgagaatt tcgcggatac cggccaacat cagcaccgac agcggatagt aaatcattgg
    26401 cttatcgtaa atcggcaaca gttgcttcga tacgccgcgc gtaatcggat gcaatcgggt
    26461 gccggaaccg cccgccagga taataccttt catgtttgcc tccgctgaaa attagccttt
    26521 cagacctaaa cgctcgccct gatagctgcc gtcctgcacc tgcttccacc agctttcatt
    26581 agccagatac cactgcaccg ttttacgcat tccactttca aaggtttcct gtggcagcca
    26641 gccaagttca cgggcaattt tcgaagcatc aatggcataa cgcagatcat gccccggacg
    26701 gtcagcgaca aaggtgatca agtcacgata gtgcaccacg ccgtgcggct tgttcggagc
    26761 cagttcttcc agcagctcgc aaatggtttc cacaacatcg agattcttac gctcgttgtg
    26821 accaccaata ttataggttt caccgacttt cccggtggtc gccacgcaat acagcgcgcg
    26881 ggcgtgatct tccacataca gccagtcacg gatttgctgc ccgttgccat ataccggcag
    26941 cggtttaccc gccagcgcgt tgaggatcat cagcgggatc agtttttccg gaaagtggta
    27001 aggaccgtag ttattcgagc agttggtgat aagcgtcggc agaccgtagg tccgcagcca
    27061 ggcgcgcacc agatggtcgc tgctggcttt tgacgcggaa taagggctgc tcggcgcata
    27121 cggcgtggtt tcggtgaaga aatcatccgt cgagtgcagg tcaccatata cttcgtcggt
    27181 ggagatatga tgaaaacgga acgctgattt tttatcttcc gtcagcgtat tccagtaagc
    27241 ccgcgccgct tcaagcaatg tataagtccc gacaatgttg gtttcaataa acgctgccgg
    27301 gccgtcaata gaacggtcaa catggctttc ggctgccaga tgcatgacac agtctggctg
    27361 atgctcagtg aatacgcgtg ccagttctgc ccgatcgcag atatcaactt tctcaaaggc
    27421 aaagcgatcg ctttgcgcga ccggtgccag cgacatcagg tttccggcgt aggtcagctt
    27481 atcgaccact accaccgcgt cgctcgtttc gttgatgata taacgcacca gcgccgagcc
    27541 aataaacccg gcaccacctg ttatcagaat ttttctcatc agcgccagac tcctttggca
    27601 tcgacgacat actgctgatg gacattgtcg ccattgataa ctttaaactg actatgatcg
    27661 accagcatca ccagcacgtc tgccgttgcc agcgcctcgt caagctgcgc cagagtacaa
    27721 agcccggtca gttttttcgg caactggtgg atgttaggct caacaaccag agtttcgccg
    27781 ctatgccact gggcgatcag ttcagcgatt tccatcgccg ggctttcgcg caggtcatca
    27841 atattcggtt taaacgccag accaaagcag gcgattttca gttcactggc gcgtttatcg
    27901 gtagccgcca ggcaatcagc caccgccgct ttcacctgat cgataaccca gaacggtttg
    27961 tgatcgttca cttcgcgcgc ggtacggata agccgcgcct gctgggggtt ctgtgccacg
    28021 ataaaccacg gatcaacagc aatgcagtga ccgcccacgc cagggccagg ctgaagaata
    28081 ttaacgcgag ggtgacgatt cgccaggcga atcagttccc agacgttaat cccctgatcg
    28141 gcacaaatca gcgacaattc attagcaaaa gcgatattca catcgcggaa gctgttttcg
    28201 gtgagcttac acatttccgc cgtccgcgag ttagtgacga cacactcacc ttcgaggaaa
    28261 attttgtaca gttcgctggc gcgggtcgaa caaaccggcg tcataccacc aatcacgcga
    28321 tcgtttttaa tcagctcgac cataacctgg cccggtaaca cgcgttccgg gcagtaagca
    28381 atgttgacgt ccgcctgctc gcccacctgc tgtgggaaag tgagatccgg acgcatctct
    28441 gctaaccatt ctgccatctt ctcggttgac cccaccggcg aggtggattc aaggatcacc
    28501 agcgcgcctt ttttcagcac tggcgcaatg gagcgagcag ccgattcaac gtaggtcata
    28561 tctggctcat gatcgccttt aaacggcgtg ggtacagcaa tcagccaggc atccgcttca
    28621 actggcgtcg tgctcgctcg taaaaaaccg ccttctacgg cagtttttac tacgctcgcc
    28681 aaatcaggct cgacgatatg gatttcgcca cgattgatgg tatcaaccgc gtgttggttg
    28741 atatcgacac caatcacctg tttttgccgt gaggcaaacg ctgctgctgt aggcagcccg
    28801 atgtaaccca gtccgataac agaaatggtc gcaaaactca tagtgatatc cgattatttt
    28861 ttaacgcttc cagaatgcga gagcatgcct gaccatcacc atacgggtta tgggcgcggc
    28921 tcatagtttg atattcgttt tcgtctttta aaagacgcgt cacttcctcg acaattcgct
    28981 gcttatccgt gcctaccaga cgcaccgtac ccgccgtcac cgcttccgga cgctcagtgg
    29041 tatcgcgcat caccagcacc ggtttcccca gcgaaggcgc ttcttcctga atgccgcctg
    29101 agtcggtcaa aatcagccag gcgtggttca tcaaccagac aaacggtaaa tactcctggg
    29161 gatcgatcag aatgacattt ttcacatgcc ccagaatgcg attgaccggc tctctgacgt
    29221 tcgggttgag atgcaccgga tagacaatct ggatgtcctg gtgcgtggtg gcaatgtctg
    29281 ccaacgcgtg gcagatttct tcaaaaccac gaccgaaact ctcacgcctg tgaccggtca
    29341 ccagaatcat ctttttattg gggtcgataa acgggtaatt tgccaccagt tctgaacgca
    29401 gcgtgtcgct gctcatcacc tgatcacgca cccataacag tgcatcaatg actgtattac
    29461 cagtaatgaa gattcggcta tccgcaacgt tttcacgcag caagttttgc cgggaagttt
    29521 cggttggaga gaagtgatac atcgccagat gcccggtcaa tgtacggtta gcctcttccg
    29581 gccacggcga atagagatcg cccgtgcgta aaccagcctc aacgtgacca acaggaatac
    29641 gctgataaaa cgccgccagg ctggttgcca gcgtcgttgt tgtgtcgccg tgaaccagca
    29701 cgacgtctgg tttgaactcg gcaagaatag gttttagccc ttccagaatc cgacaggtta
    29761 tctctgtcag gccctgtcct ggctgcatta tgttgagatc gtagtcaggt acaatggaaa
    29821 agagtttcag cacctgatcg agcatctccc gatgctgcgc agtgacgcaa actttagcct
    29881 caaaaaaagg agcttttgcc aacgcatgca ccaacggagc catcttgatg gcttccgggc
    29941 gcgtaccaaa tacagtcagt actttcacat cgattctctt cgaataagcg gcgagcgcct
    30001 ttgcgctcgc cgcagcagtg ttgctatttc gagcaacggc gggttaatgc gacaccagcc
    30061 ccgatcagcc ccccgacaat gccccacata atcatcagga aggcacgacg tgggctatcg
    30121 cgttttaccg gttcttccgg cgtacgcaaa tagcgatagg tctgaaaacg cggatccagg
    30181 gttggaccaa cattcagggt gtttaacatg gcccgattct gatcatagtc gagatcaaag
    30241 gccggaccga cggcctgtaa attttccagt cgagcctgga gcattggacg cccaagcagg
    30301 aacatttctg aatcaggtaa ttcctcggca ggcacatctg tcgcactgcg cgaaatatta
    30361 tgctgctcag caattttcag cgcctgctca atgctgttca tccggcggtc gtagatggct
    30421 ttcgccacct cttcctgacg cttcacctga gctttcatct ggatggtgcg tgccgcccat
    30481 gcgcctttca gctcatcatt cagatggctg gctgcacgct ggctggcaaa agcaacatac
    30541 tgacgtaaca ggttattagc gtcaggcgcg gtttcggcaa taagcttcac gctgtcattg
    30601 accgcgcggg taaagtctcc ggggataaac tggatgttgt taatcatttc atccagcaac
    30661 gccgcatcgg ctttgctgtt gcccaccatc cgctgtttgt aatagtcggt ttgcagccag
    30721 aactctctgc gggtatccca cgaggccagt tgcataacaa actctttata ggcttcgtcc
    30781 atgaccgatg gttgatcggc agaagccatg tttgaacgga catccaggtt acgcaaaaat
    30841 tgctgctgcg agtaatatcc ccccagcata ttcaccgttg gacgatcggt aatcgccgtc
    30901 gagctccact cctgacgagc aaaaaaagta tacgccagcg cgattaacgc aaacgccagc
    30961 cccatgccaa taatccatag cttcccagcc cacaaggtac gaaacaaccc acgaatatcc
    31021 agttcatttt cagcgtcttc ggccggtttc ccaggcattg gttgtgtcat cacatcctca
    31081 tttatttggt taaattgggg ctgccaccac gatttctacg cagtctgcgt tttacgcgct
    31141 taataaagcg agcaactttc caggcacgct taatgcaata tccatagagg aagaatgcta
    31201 gcaaaaagag caccagcatg acccactccg ggacaaaatg agaatattct gccagcacgc
    31261 caatggaagc gagcagtgct gcggcaaggg taatcagcac aaacgcctga cgggaagtaa
    31321 acccggcacg catgatcaaa tggtgaatat gctgacggtc aggagagaat gggctcatgc
    31381 ctttacgcag gcgacggtac ataatcgcca ccatatccat tagcggaatg gcgattatcc
    31441 acaaagcggt aaccgggctg atgggatggg ttttgccctg ggtcgtttcg agcaggatcc
    31501 agataacggt aaaaccaatc agcgtactgc ccgcatcacc cataaagact ttgtagcggc
    31561 gacccaggat accaaggtta agcatgatgt atggcaggat ggcggcgatc atcgcaaagc
    31621 accagattgc gaggctggtt tgcccgtcga accacaaaat cataccgatt gctgcaaacg
    31681 agacgcagga caacccgccc agcaagccat caatgccatc aaccatgttg aacgcattaa
    31741 tggccgccca gacggcaaat agcgtcagga agtaaccaaa cggtccgagc accatctccc
    31801 aggagccaaa gatataaccc aggctactga gataaagttt gccgaacacc atcataacaa
    31861 tgccaacagc ggcctgtatg gtggcacgga tttttacgct gatatcaaaa cggtcatcca
    31921 gcgcgccaat gaaaacaagc acaccggcac aagcgagata gagagatgca tgcggaatat
    31981 agtaatcgac aattccgaac gtgaagcaaa tccctgcgta aaccgaaatc cccccaacga
    32041 gaggtatcaa tccctggtga cgtttgcgga agtttggttt atccactaaa ccgacttttt
    32101 ttgccacctt acgggcaaaa aacagaaaca gtgtcgtgaa taaaaaaata ctgatgagat
    32161 cagtactcac tgtcagtaaa ttcacaatgc atgctctcag agaaaattat tagcagaagt
    32221 ataaccacga agacctttat tcagaaggga aagtccgttc cgaacccacc agtcctgtgc
    32281 aaaaattaac catttgatat gcaaattgca taacatgcca gcaaattcca ggaattttcc
    32341 taacatcgcc agcgcggcat taagattaca gatataaaag caaaacgcca cgtaaacacg
    32401 tggcgttttt ggcataagac aaatttatga gcgtttcatc atttcgaaga aatcgtcatt
    32461 ggtcttggtc atggccagtt tattaatgag gaattccatt gcatcgattt cgcccatcgg
    32521 gtgaatgatt ttgcgcagga tccacatttt ctgcagttct tcctgagtcg tgagcagctc
    32581 ttctttacgg gtaccggaac ggttgtagtc gatagccggg aagacgcgtt tttcagcgat
    32641 cttacgagag aggtgcagtt ccatgttgcc tgtaccttta aactcttcgt aaataacttc
    32701 gtccatttta gaaccggtat cgataagcgc cgtcgcgata atggtcaggc tgccgccctc
    32761 ttccacgtta cgcgccgcac cgaagaagcg tttcggacga tgaagggcat tggcgtccac
    32821 accaccggtc aacactttac ctgacgccgg aacaacagtg ttgtaagcgc gcgccagacg
    32881 agtgatggag tcgagcagaa tgataacgtc tttcttgtgc tcaaccaggc gtttggcctt
    32941 ctcgatcacc atttccgcaa cctgaacgtg gcgagatgcg ggttcgtcaa aggtagaagc
    33001 aacaacttca ccttttacca gacgctgcat ctcggttact tcttccggac gttcgtcgat
    33061 cagcagaacc atcagcacac aatccgggtg gttgtaagca atgctctgag caatgttctg
    33121 cagcagcata gttttaccgg ctttcggcgg tgccacaatc agaccacgct gaccacgacc
    33181 gataggtgat gccagatcca gtacgcgagc ggttaaatct tccgtagaac cgttaccacg
    33241 ttccatacgc agacgagagt ttgcgtgcag cggggttaag ttctcaaaga ggattttgtt
    33301 gcgggcgttt tcaggtttgt cgaagttaac ttcgttaact ttcagcagcg caaaatagcg
    33361 ttcaccttct ttcggcgggc gaatcttacc agagatggta tcaccagtgc ggaggttgaa
    33421 acggcggatt tggctagggg aaacgtagat gtcatcagga ccggcgaggt aggagctgtc
    33481 tgcggaacgg aggaaaccaa atccatcctg caatatctcc agtacgccat caccaaagat
    33541 atcttcgcca ctctttgcgt gctgcttcag gatggcaaaa ataatgtcct gcttacgcat
    33601 acgagccagg ttttccagcc ccatattttc gccgagagtg atcagctcag aaaccggcgt
    33661 attctttaat tcggtaagat tcatagtggt gtgagttctt aaacttgggg taaatctcga
    33721 acttaatgtt gtgaatggta tggcaggatc atccatgcct gtttacggtc atcgactcat
    33781 gtcttttcgc tgcctggtca caggagagta cgcagaactg aaacgacaag acggattgag
    33841 tgacgagcca gaaatctgtt cacttcgcat ttaagataaa acgggaagcg ttggaaatta
    33901 caagattcaa acttaataag gtatgtttaa tacgaagtca acactaagtt agcatgactc
    33961 acgccgggcg tccagttttt agcgacgggg cacccgaaca tgaaattccc ttacgccagg
    34021 ttagcgtcga ggaactcttt caactgacct ttagacagtg cacccacttt ggttgccgcc
    34081 acttcaccgt ttttgaacag cagcagagtc gggataccac ggatgccata tttcggcgca
    34141 gtgccagggt tttgatcgat gttcagtttt gcaacggtca gtttgccctg atattcgtca
    34201 gcgatttcat ccagaatcgg ggcgatcatt ttgcacggac cgcaccactc tgcccagaaa
    34261 tcgacgagga tcgccccgtc cgctttgagt acatccgtgt caaaactgtc gtcagtcagg
    34321 tgaataattt tatcgctcat atataactcc acaggaataa gcctggcgtg ttggtttcgt
    34381 tgttggtgta acattaacca actaaaggtt gactttattt caccggatac gctttcgtaa
    34441 agcaatagta agctgatatt ctaccacact atgagcaaaa cacatttaac agaacagaag
    34501 ttttccgact tcgccctgca tccgaaggtt gtagaaatcc ttgaaaaaaa agggtttcat
    34561 aactgtacgc ccattcaggc actggccctt ccgctgacgc tggcgggtcg tgacgtagcc
    34621 gggcaggcgc aaaccggtac cgggaaaacg atggcgtttc ttacgtcaac gtttcattat
    34681 cttctctctc atcctgcgat tgccgatcgc aaggtgaatc aaccacgtgc cttaattatg
    34741 gcaccgacgc gtgaacttgc cgtgcagatc catgccgacg cagaaccgct ggcggaagct
    34801 accggcctga agctgggtct ggcttacggt ggtgatggct acgacaaaca gctgaaagtg
    34861 ctggaaagcg gcgttgacat tctgattggc actacggggc gtttaattga ctacgccaag
    34921 cagaaccaca ttaacctcgg tgccattcag gtggtggtac tggacgaagc cgatcgcatg
    34981 tacgatctgg gctttattaa agatatccgc tggctgttcc gccgtatgcc gcctgcaaac
    35041 cagcgcctca acatgctgtt ctccgccacg ctttcgtacc gggtacgtga actggcgttc
    35101 gagcagatga acaatgccga atatattgaa gtggaaccgg aacagaaaac gggccaccgt
    35161 attaaagaag agcttttcta cccttctaac gaagaaaaaa tgcgtttgct gcaaacgctg
    35221 atcgaagaag agtggccaga cagagcgatt attttcgcca ataccaaaca ccgttgtgaa
    35281 gagatctggg gccacctggc ggcagatggt catcgtgtcg gtttgttgac aggcgatgtc
    35341 gcgcagaaaa aacgtctgcg tattcttgat gaatttaccc gtggcgatct ggatattctg
    35401 gttgccaccg acgttgccgc gcgtggtttg catattccgg cagtgacgca cgtctttaac
    35461 tacgatttac ccgatgactg tgaagattac gttcaccgta ttggtcgtac aggtcgcgca
    35521 ggcgcaagcg gtcactctat cagcctggcg tgtgaagagt atgcattgaa tttgcctgct
    35581 attgagacct atattggtca ctcaattccg gtaagcaaat acaatccgga cgcattgatg
    35641 accgatctgc caaaaccgct gcgcctcacg cgcccacgta caggcaatgg tccgcgtcgt
    35701 actggcgctc cgcgtaatcg tcgtcgttca ggttaaataa aatgtcatac tcaaaatcat
    35761 tcaaactgta tcaagatggc aagagaatga atcccgatga gcatactgta gtaagtgatt
    35821 caggtgaaag aatgcagcca acacagagac agattgaagg atgaagagta tgggttccac
    35881 ctcgtcgctg tatgcagcca ttgatctcgg ttcgaatagt tttcatatgc tggttgtgcg
    35941 cgaggtggct ggaagcatcc agacgctgac gcgaataaaa cgcaaagtgc gtctggctgc
    36001 tggcctgaat agcgaaaatg ccctgtctaa tgaagcaatg gagcgcggtt ggcaatgtct
    36061 gcgcctgttt gctgaacgtc tgcaagatat ccctccctcg caaattcgcg ttgtcgctac
    36121 ggcgacatta cgtcttgccg tcaatgcggg tgattttatt gccaaagcgc aggaaatcct
    36181 cggttgtccg gtacaggtga tcagcggtga agaggaagca cgtctgattt atcagggcgt
    36241 tgctcacaca actggcggtg ccgatcagcg cctggtggtg gatataggcg gtgccagtac
    36301 tgaactggta accggcacgg gtgcacaaac cacctcgttg ttcagcctgt cgatgggctg
    36361 cgtcacctgg ctggaacgct attttgccga tcgtaatctg gggcaggaaa attttgatgc
    36421 tgcagaaaaa gcggcacgcg aagtgttacg tccggttgcc gatgaattac ggtatcacgg
    36481 ctggaaagtg tgcgttggtg cttccggcac cgtgcaggcg ttacaggaaa tcatgatggc
    36541 acaggggatg gatgaacgca ttaccctgga aaagttgcag caattgaaac agcgagccat
    36601 tcattgcggt cggctggagg aactggagat tgacgggctg acgctggaac gtgcgttagt
    36661 gttcccgagt ggtctggcga tcctgatcgc catttttacc gaactgaata ttcagtgtat
    36721 gaccctggcg ggcggtgcgc tgcgtgaagg cctggtctac ggcatgttgc atctggccgt
    36781 cgagcaggat attcgcagcc gtacgctgcg taatattcag cgccgcttta tgatcgatat
    36841 tgatcaggcg cagcgcgtag ccaaagttgc ggctaacttc ttcgatcagg tggaaaagga
    36901 atggcatctt gaagcaataa gccgcgattt gctcatcagc gcctgtcagc ttcatgaaat
    36961 cggcctgagc gttgacttta aacaagcgcc gcaacacgct gcttatctgg tgcgtaatct
    37021 ggatcttccc ggttttaccc ccgcacagaa aaaattgctg gcgacgctac tgctcaacca
    37081 gactaatccg gtcgatctct catcgctgca tcagcaaaat gccgtaccgc cgcgcgtcgc
    37141 agaacaactc tgccgtttac tccgcctggc catcattttt gccagccgtc gccgtgacga
    37201 tctcgtgcca gagatgacat tacaggctaa ccatgaactg ttgaccttga cgcttccgca
    37261 aggttggcta acccaacatc cgctgggtaa agagattatt gctcaggaaa gccagtggca
    37321 gagctatgtc cactggccgc tggaagtgca ttaatgagta agtgccggat gcgatgctga
    37381 cgcatctttt ccggccttga ttatttccct cgttttgccg ccatcatcgc tttcagattc
    37441 gccagatggc tttgcccttt ctgcatccgt tcttcggcgc tgaccacttt gcgctcctgt
    37501 tcccaaatca gatcatcctg cggcagctcc agcaaaaagc ggctcggctc cgggcgcacc
    37561 agctcgccgt actgacggcg ttctttacac agcgtaaagg tcaattcctt ctgggcgcgg
    37621 gtaatgccga cataggccag ccgccgctcc tcatcgatat tatcttcatc gatgctgctc
    37681 tggtgcggca aaaacccttc ttccataccg accatgtaga cataaggaaa ctccagccct
    37741 tttgacgcgt gcagagtcat cagttgcacc tgatccagct cttcttcact ctcaccacgc
    37801 tccatcatgt cgcgcaaagt aaagcgcgtc accacctggg tgagcgtcat cggctcatcc
    37861 agttcgctgc cttccagcat ctccgtcatc cagctaaaca gttggttgac gttcttcatg
    37921 cgcatttcgg cggctttcgg gctgggcgat gtttcgtaca gccaggattc ataatccatg
    37981 ccgtggatca gatcgcgcac cgcggcaatc ggctcccgct ccgccagacg ctggatttct
    38041 gccaaccagt gagtaaagcg ggtcaatgct tcataaccac gtccgctaag cgtctgactc
    38101 aggcccatat caaagctggc ggtaaacatg cttttattgc gcgtcatcgc ccactcaccc
    38161 agctttttca gcgtcgccgg gccaatctct ctcttcggcg tgttaacgat acgcagaaat
    38221 gcgctgtcat cgtccgggtt agtcagcacg cgcagataag ccagcaagtc cttgatttca
    38281 ggacgagaga aaaacgacgt accaccagaa attttgtacg ggatgcggtt ttgcatcagg
    38341 aatttttcaa acactcgcga ctgatggtta ccgcgataaa gaatagcgta atatttgtac
    38401 tgcgttttat tgacgaagtg atgcgcaatc agttcaccag tgacgcgctc ggcttcatgt
    38461 tcttcgttat tcgcgcttaa aactttaagc tctgtgccgt aacccagttc ggagaacaga
    38521 cgcttctcaa agacgtgcgg gttattggcg atcaggatgt tcgccgcttt caaaatacgt
    38581 ccggaagagc ggtagttctg ctcaagctta atcaccttca gcgccggaaa atcctgactc
    38641 agcagcacca ggttttgtgg acgtgcgccg cgccaggagt agatcgactg gtcgtcatcg
    38701 cccaccacgg taaagcgcgc gcggctgccc accagcagtt tcaccagttc atactggctg
    38761 gtgttggtgt cctgatactc atccaccagc agatagcgaa ttttgttctg ccagcgctca
    38821 cggacttctt cattgcgttg cagcagcaac gtcggcaata aaatcagatc atcgaagtcg
    38881 agaacattgc acgctttcag gtgtgcatca tacagcccat aacaatgggc aaaaatacgg
    38941 tcccgctcgc caatcgcact ggctgccgcc tgggacggtg ttttgagatc gttcttccag
    39001 ttagagatgg tcgaaatcaa ctgttgcagg agaactttgt catcttcaat cagcccttcg
    39061 gtcaactctt tgagcaacgc cagctgatcg gtatcgtcaa acagcgaaaa gttcgccttc
    39121 atccccagcg ccgcatactc acgcttgatg atatccagcc ccagcgtgtg gaaggttgag
    39181 atcatcagcc cacgcgcctc tttgcgaccc agcgtctgtc cgacacgctc tttcatctcg
    39241 cgcgccgcct tattagtaaa ggtcaccgcc gcgatatgtc gcgcctgata accgcaaccg
    39301 cggatcagat gggcgatttt attggtgatc acacgagttt taccggaacc cgcgcccgcc
    39361 agcaccaggc aggggccggt aacgaattcg acagcttgtt gttggccggg gtttagacgc
    39421 ataggtgtat tgctcaatct tcgaacgggg ggaggattgt agcagaatcg catttgaatg
    39481 tgaccgcgtg taagccgcta accggttggc tgcggatgtt taaatcagag agggaagacc
    39541 gaaaccggag ttcatcgtga atccattaga cttagaaaat atcgggtcgt aacgttgtgt
    39601 tattactttt tcagagttta ctaaggagag gtgtactcgt ggcgattaat ttcagtccta
    39661 aggttggtga aatactggaa tgcaactttg gtaactatcc tgttagccag aatggacagt
    39721 tcagcaccac gtattacgat ggccgcattc ctcctgaaat gataaaaaac aggttagt
//
LOCUS       DADMIB010000017        37818 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.017, whole genome shotgun sequence.
ACCESSION   DADMIB010000017 DADMIB010000000
VERSION     DADMIB010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37818
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.017"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..392
                     /locus_tag="JNZ89_000890"
     CDS             <1..392
                     /locus_tag="JNZ89_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8934838.1"
                     /translation="HYPLICSNKHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEI
                     DEKFMNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSHRDFLNLKEIKPEHPLPSI
                     KLYISYNKSSLNNLVFSRFIDRLNESF"
     gene            539..2056
                     /locus_tag="JNZ89_000891"
     CDS             539..2056
                     /locus_tag="JNZ89_000891"
                     /inference="COORDINATES: protein motif:HMM:NF014273.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
                     /protein_id="HAY8934839.1"
                     /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML
                     HLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNS
                     LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA
                     AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW
                     YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS
                     GVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEDDRIKAINEIRMAIHQ
                     VSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDK
                     NAMEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQIT
                     AMSEIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK"
     gene            complement(2057..3206)
                     /gene="ybdL"
                     /locus_tag="JNZ89_000892"
                     /pseudo
     CDS             complement(2057..3206)
                     /gene="ybdL"
                     /locus_tag="JNZ89_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-oxo-acid transaminase"
     gene            3315..4403
                     /gene="hcxA"
                     /locus_tag="JNZ89_000893"
     CDS             3315..4403
                     /gene="hcxA"
                     /locus_tag="JNZ89_000893"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcxA"
                     /protein_id="HAY8934840.1"
                     /translation="MPHNPIRVVVGPANYFSHPRSFNHLNDFFTDEQLSRAVWIYGKR
                     AIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA
                     KALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL
                     NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALA
                     DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT
                     KVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP
                     VESIHYLPVTLTPDTLRAAFEKVESFKA"
     gene            complement(4413..4610)
                     /locus_tag="JNZ89_000894"
     CDS             complement(4413..4610)
                     /locus_tag="JNZ89_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HAY8934841.1"
                     /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY
                     EEFFRERQDARYGGKGGARCC"
     gene            complement(4792..6897)
                     /gene="cstA"
                     /locus_tag="JNZ89_000895"
     CDS             complement(4792..6897)
                     /gene="cstA"
                     /locus_tag="JNZ89_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein CstA"
                     /protein_id="HAY8934842.1"
                     /translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI
                     YLIAYRFYGLYIAKNVLAVDPKRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG
                     VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRI
                     GEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL
                     APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA
                     CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA
                     MNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL
                     AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG
                     LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC
                     AVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSG
                     NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP
                     YEPMPENVEEIVAQAKGAH"
     gene            complement(7078..7491)
                     /gene="entH"
                     /locus_tag="JNZ89_000896"
     CDS             complement(7078..7491)
                     /gene="entH"
                     /locus_tag="JNZ89_000896"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proofreading thioesterase EntH"
                     /protein_id="HAY8934843.1"
                     /translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT
                     RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC
                     QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG"
     gene            complement(7494..8240)
                     /gene="dhbA"
                     /locus_tag="JNZ89_000897"
     CDS             complement(7494..8240)
                     /gene="dhbA"
                     /locus_tag="JNZ89_000897"
                     /EC_number="1.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase"
                     /protein_id="HAY8934844.1"
                     /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY
                     PFATEVMDVADAGQVAQVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAV
                     NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL
                     ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI
                     ANTILFLASDLASHITLQDIVVDGGSTLGA"
     gene            complement(8240..9097)
                     /gene="entB"
                     /locus_tag="JNZ89_000898"
     CDS             complement(8240..9097)
                     /gene="entB"
                     /locus_tag="JNZ89_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis bifunctional
                     isochorismatase/aryl carrier protein EntB"
                     /protein_id="HAY8934845.1"
                     /translation="MAIPKLQAYALPESHDIPQNKVDWAFELQRAALLIHDMQDYFVS
                     FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS
                     PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT
                     ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPVPASKAAL
                     REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAW
                     WKLLSREVK"
     gene            complement(9111..10721)
                     /gene="entE"
                     /locus_tag="JNZ89_000899"
     CDS             complement(9111..10721)
                     /gene="entE"
                     /locus_tag="JNZ89_000899"
                     /EC_number="2.7.7.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2,3-dihydroxybenzoyl)adenylate synthase"
                     /protein_id="HAY8934846.1"
                     /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASDSIAVID
                     GELQLSYRELNQAADNLACTLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL
                     ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLHNDSGE
                     HNLQDAINHPADGFTATASPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC
                     QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVT
                     ALVPPAVSLWLQALAEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM
                     AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR
                     GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENL
                     LLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE
                     CVDSLPLTAVGKVDKKQLSQWLASRASA"
     gene            complement(10731..11906)
                     /gene="entC"
                     /locus_tag="JNZ89_000900"
     CDS             complement(10731..11906)
                     /gene="entC"
                     /locus_tag="JNZ89_000900"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase EntC"
                     /protein_id="HAY8934847.1"
                     /translation="MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAV
                     NGDSPDSPFQQKLAALFADAKVQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEK
                     QASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA
                     AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR
                     QPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWH
                     LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWC
                     DSEGNGEWVVTIRCAKLRENQVRLFAGAGIVLASSPLGEWRETGVKLSTMLNVFGLH"
     gene            12281..13237
                     /gene="fepB"
                     /locus_tag="JNZ89_000901"
     CDS             12281..13237
                     /gene="fepB"
                     /locus_tag="JNZ89_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-enterobactin ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY8934848.1"
                     /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES
                     QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY
                     IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG
                     EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM
                     LEQLGFTLAKLPTGLNASQSQGKRHDIIQLSGENLAAGLNGESLFLFAGDQKDADAIY
                     ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF"
     gene            complement(13241..14491)
                     /gene="entS"
                     /locus_tag="JNZ89_000902"
     CDS             complement(13241..14491)
                     /gene="entS"
                     /locus_tag="JNZ89_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin transporter EntS"
                     /protein_id="HAY8934849.1"
                     /translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
                     QMMTHSTWLVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN
                     ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV
                     ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFR
                     FLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAEIGFLYAAIPLGAAIGAL
                     TSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYT
                     MLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGV
                     LLLLVLVELRRFRQTPPQVTASDS"
     gene            14602..15606
                     /gene="fepD"
                     /locus_tag="JNZ89_000903"
     CDS             14602..15606
                     /gene="fepD"
                     /locus_tag="JNZ89_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-siderophore ABC transporter permease"
                     /protein_id="HAY8934850.1"
                     /translation="MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAF
                     SGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGAS
                     FAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
                     VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALN
                     SLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGA
                     DHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
                     "
     gene            15603..16595
                     /gene="fepG"
                     /locus_tag="JNZ89_000904"
     CDS             15603..16595
                     /gene="fepG"
                     /locus_tag="JNZ89_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter permease"
                     /protein_id="HAY8934851.1"
                     /translation="MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLETSQVFAALM
                     GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS
                     GVLVAMVLFGQDLTAIALAAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
                     FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLE
                     MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW
                     GLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
     gene            16592..17407
                     /gene="fepC"
                     /locus_tag="JNZ89_000905"
     CDS             16592..17407
                     /gene="fepC"
                     /locus_tag="JNZ89_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter ATP-binding
                     protein"
                     /protein_id="HAY8934852.1"
                     /translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC
                     GKSTLLRTLSRLMTPAHGHVWLDGEHIKHYASKEVARRIGLLAQNATTPGDITVQELV
                     ARGRYPHQPLFTHWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ
                     ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR
                     EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLERTAPSTANS"
     gene            complement(17404..18537)
                     /gene="fepE"
                     /locus_tag="JNZ89_000906"
     CDS             complement(17404..18537)
                     /gene="fepE"
                     /locus_tag="JNZ89_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen length regulator"
                     /protein_id="HAY8934853.1"
                     /translation="MSSLNIKQGSDAHFSEYPLASPSSNEIDLLNLIEVLWRAKKTVM
                     AVVFAFACAGLLISFILPQKWTSSAVITPAEAIQWQDLEKTFTKLRVLDLDVNIDRGG
                     AFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNAS
                     KKKDEPSLYTSWTLSFTAPTSKEAQTVLSGYIDYISALVVKESIENVRNKLEIKTQFE
                     KEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGAD
                     GIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKANVNDVNFTPFKYQLSPSLPVKKD
                     GPGKAIIVILSALIGGMVACGSVLLRYAMASRKQDAMMADHLV"
     gene            complement(18752..22633)
                     /gene="entF"
                     /locus_tag="JNZ89_000907"
     CDS             complement(18752..22633)
                     /gene="entF"
                     /locus_tag="JNZ89_000907"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin non-ribosomal peptide synthetase
                     EntF"
                     /protein_id="HAY8934854.1"
                     /translation="MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGEVDAPLL
                     ARAVVDGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQ
                     ADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTW
                     LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGR
                     SASADILRLKMEFTDGEFRQLATQLSGVQRTDLALALTALWLGRLCNRMDYAAGFIFM
                     RRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRD
                     SGRAAGDEPLFGPVLNIKVFDYQLDIPGVQAQTHTLATGPVNDLELALFPDEHGDLSI
                     EILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQINATQV
                     EIPETTLSALVAEQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSV
                     AVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRF
                     ADVPDLTNLCYNAPLKPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL
                     LWMQNHYLLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF
                     AEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTSV
                     PLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGV
                     AGDLYLTGIQLAQGYLGRPDLTASRFIADPFVPGERMYRTGDVARWLDNGAVEYLGRS
                     DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSG
                     LPLDTSALQAQLRETLPPHMVPVVLLQLPLLPLSANGKLDRKALPLPELKAQAPGRAP
                     KAGSETIIAAAFASLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVM
                     VASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYI
                     DPQWSIIGIQSPRPNGPMHTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQG
                     IAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS
                     TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL
                     DIYRQDCAHVDIISPGAFVKIGPIIRATLNR"
     gene            complement(22630..22848)
                     /locus_tag="JNZ89_000908"
     CDS             complement(22630..22848)
                     /locus_tag="JNZ89_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbtH family protein"
                     /protein_id="HAY8934855.1"
                     /translation="MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDIVCQPQ
                     SQESCQQWLEAHWRTLTPANFTQLQEAQ"
     gene            complement(22851..24053)
                     /gene="fes"
                     /locus_tag="JNZ89_000909"
     CDS             complement(22851..24053)
                     /gene="fes"
                     /locus_tag="JNZ89_000909"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin esterase"
                     /protein_id="HAY8934856.1"
                     /translation="MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYS
                     PIKRVWVYITGVTDHHQNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIF
                     SAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGRGHAVSALEMPQAPLQPGWDCPQA
                     PEIPAKEIIWKSERLKNSRRVWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSL
                     THRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTV
                     VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEG
                     LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLW
                     QPLFHDRS"
     gene            24296..26536
                     /gene="fepA"
                     /locus_tag="JNZ89_000910"
     CDS             24296..26536
                     /gene="fepA"
                     /locus_tag="JNZ89_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore enterobactin receptor FepA"
                     /protein_id="HAY8934857.1"
                     /translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN
                     LQAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPE
                     NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA
                     GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD
                     KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS
                     RQGNLYAGDTQNTNSDAYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHT
                     RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN
                     QQRMKDLSSNTQALTGANTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTP
                     GLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG
                     CYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG
                     QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII
                     PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS
                     ATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM
                     SVNTHF"
     gene            26711..27331
                     /gene="entD"
                     /locus_tag="JNZ89_000911"
     CDS             26711..27331
                     /gene="entD"
                     /locus_tag="JNZ89_000911"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415115.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin synthase subunit EntD"
                     /protein_id="HAY8934858.1"
                     /translation="MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGR
                     KRKAEHLAGRIAAIYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVVSRQ
                     PIGVDIEEIFSAQTATELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEI
                     QTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD"
     gene            complement(27453..27605)
                     /locus_tag="JNZ89_000912"
     CDS             complement(27453..27605)
                     /locus_tag="JNZ89_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY8934859.1"
                     /translation="MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL
                     AYEPKK"
     gene            28059..29177
                     /locus_tag="JNZ89_000913"
     CDS             28059..29177
                     /locus_tag="JNZ89_000913"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HAY8934860.1"
                     /translation="MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSILIDAVKNK
                     ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPF
                     QKWQRQEVCDNERYQRTLENFGYLIQQVTVFGQHVHVGCASGDDAIYLLHGLSRFVPH
                     FIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID
                     SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD
                     YLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEAL
                     HRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD"
     gene            29243..29491
                     /locus_tag="JNZ89_000914"
     CDS             29243..29491
                     /locus_tag="JNZ89_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1158 domain-containing protein"
                     /protein_id="HAY8934861.1"
                     /translation="MKHPLETLTTAAGILLMAFLSCLLLPTPALGLTLAQKLVTMFHL
                     MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD"
     gene            29556..29924
                     /locus_tag="JNZ89_000915"
     CDS             29556..29924
                     /locus_tag="JNZ89_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HAY8934862.1"
                     /translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS
                     ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND
                     SWNLVVDGLAKRDQKRVRPG"
     gene            30018..30671
                     /gene="nfsB"
                     /locus_tag="JNZ89_000916"
     CDS             30018..30671
                     /gene="nfsB"
                     /locus_tag="JNZ89_000916"
                     /EC_number="1.5.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NAD(P)H nitroreductase"
                     /protein_id="HAY8934863.1"
                     /translation="MDIISVALKRHSTKAFDASKKLTPEQAEQIKTLLQYSPSSTNSQ
                     PWHFIVASTEEGKARVAKSAAGNYVFNERKILDASHVVVFCAKTAMDDAWLKLVVDQE
                     DADGRFATPEAKAANDKGRKFFADMHRKDLHDDAEWMAKQVYLNVGNFLLGVAALGLD
                     AVPIEGFDAAILDAEFGLKEKGYTSLVVVPVGHHSVEDFNATLPKSRLPQNITLTEV"
     gene            30779..32026
                     /locus_tag="JNZ89_000917"
     CDS             30779..32026
                     /locus_tag="JNZ89_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HAY8934864.1"
                     /translation="MQDLISQVGDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV
                     LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC
                     AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL
                     IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGA
                     VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF
                     LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESILNLRRMTNIGTFRAYLNEY
                     LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE
                     FGLRLHQSPAGNDIRSLAGAFKQ"
     gene            complement(32094..33470)
                     /gene="pheP"
                     /locus_tag="JNZ89_000918"
     CDS             complement(32094..33470)
                     /gene="pheP"
                     /locus_tag="JNZ89_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine transporter"
                     /protein_id="HAY8934865.1"
                     /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG
                     IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL
                     SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET
                     EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVI
                     MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYICSLVVLLALYPWVEVKSN
                     SSPFVMIFHNLDSNEVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR
                     VSHRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF
                     RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFV
                     AFKTLRRK"
     gene            complement(33572..36699)
                     /gene="cusA"
                     /locus_tag="JNZ89_000919"
                     /pseudo
     CDS             complement(33572..36699)
                     /gene="cusA"
                     /locus_tag="JNZ89_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415107.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter permease
                     subunit CusA"
     gene            complement(36711..>37818)
                     /gene="cusB"
                     /locus_tag="JNZ89_000920"
     CDS             complement(36711..>37818)
                     /gene="cusB"
                     /locus_tag="JNZ89_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     adaptor subunit CusB"
                     /protein_id="HAY8934866.1"
                     /translation="RKILFWYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVR
                     IDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVG
                     DKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLI
                     ATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWL
                     VKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWL
                     QLNTASEPMLLIPSQGLIDTGSEQRVITIDADGRFVPKRVAVFQASQGVTALRSGLAE
                     GEKVVSSGLFLIDSEANISGALERMRSESATHAH"
BASE COUNT         9074 a        10550 c         9629 g         8565 t
ORIGIN      
        1 gtcattaccc tctaatttgt agtaataagc atccgcgaat tactgacaat agcacttatg
       61 aacaaattat ggcagaagag ttcacccaat taatatccaa atcagcagga gttgatgata
      121 ttcaaatgga aatagacgag aagtttatga atcgcaaaat ttcatttcgt ggttcctctt
      181 tgctgacaat aattaatagc attgcagtta cagatttact gggaatagtc ccctatgaac
      241 tttataactc ccaccgtgac tttcttaatt taaaagagat aaaaccagaa catccgttac
      301 cttcaataaa gctttacatt tcctataata aatcttcttt aaataatttg gtgttctccc
      361 gatttattga ccgtctaaat gagagttttt gatatataac tacagacagc tactataact
      421 ttcatctatt tattcacagc gcgaatgaaa aataaaacac tctgctttac agtgtttact
      481 ttataattaa cagtcttatc tcactgttca ccctgtaacg ttcagagagc gtcttcagat
      541 gtctatttat aaaattcctc ttccgctcaa tattctggaa gctgcacgag agcgtattac
      601 ctggacactc aacaccctac cccgcgtttg tgtctcattt tctggcggca aagactctgg
      661 tttaatgctg catctgacag ccgaacttgc ccgacaaatg ggcaaaaaaa tctgcgtttt
      721 gtttatcgac tgggaggcgc aattctcttg cactattaac tatgttcagt ccctgcgcga
      781 gttgtacacc gatgtcatcg aagagtttta ctgggttgcg ctcccgctta cgacgcaaaa
      841 ttccctttca caataccaac ccgaatggca gtgctgggaa cctgatgtcg aatgggtgcg
      901 tcagcccccg caagatgcga taaccgatcc tgactttttc tgcttttacc agccaggcat
      961 gaccttcgaa caatttgtac gtgagtttgc cgaatggttt tcacaaaaac gtccggcggc
     1021 gatgatgatc ggcatccgtg cggatgagtc ctacaaccgt tttgtcgcca tcgccagttt
     1081 aaataaacaa cgttttgccg acgataaacc atggactacg gccgcaccag gcggtcatag
     1141 ctggtacatt taccccattt acgactggaa agtggctgat atctggacct ggtatgcaaa
     1201 tcatcaaagt ctctgcaacc cactgtataa cctaatgtat caggcaggcg ttcctctgcg
     1261 tcatatgcga atttgcgaac cttttggccc ggagcaacga caaggattat ggctctatca
     1321 cgttatcgaa ccggatcgct gggctgctat gtgcgcacga gtcagcgggg taaaaagtgg
     1381 cggcatttac gccggacatg acaatcattt ctatgggcat cggaaaatcc tcaagccaga
     1441 acatttagac tggcaagaat atgcattatt gctgctcaat agcatgccgg aagatgatcg
     1501 catcaaagcg attaatgaaa tccgcatggc gatccatcag gttagcccct ttcgtgaaga
     1561 gccagtggat tgcgttctgt gggttaaaaa cagccaactt atgcctaatg attacaaccc
     1621 aaacaacgtg gcaccacccg aaaaaaaact gctgcaaaaa tccattgaaa tagatggttt
     1681 tacccaaccc attgtggtca cacatacgga taaaaatgcc atggaaatcg tggatggttt
     1741 tcaccgccat gaaattggta aaggctcatc atcattaaaa ttacgcttaa aaggttattt
     1801 gccggtgacc tgtctggaag gtacgcgtaa tcaacgcatc gccgcgacta ttcgtcataa
     1861 tcgcgctcgt ggacgccatc aaatcaccgc catgtcggaa atcgtccgtg aacttagcca
     1921 gttgggatgg gacgataata aaattggcaa agagctggga atggacagcg acgaagtgct
     1981 gcgcctgaag caaattaacg gcctgcaaga gttgtttgcc gaccgtcaat attcccgcgc
     2041 ctggacggtt aaatagctaa agctggcgca ggcgttcagc tgctgccagc aacgtcgatt
     2101 ccttcttggc aaaacagaga cgaatcagtt tatgtgggaa gggatcggcg caaaacaccg
     2161 acagcggaat cgccgccacg ccgtgctccc gcgtcagcca ctggcaaaac tcaacatcat
     2221 ccagggtaga aacctcgctg taatccacca gcaaaaagta tgtaccttca cacggtaaaa
     2281 tctccagccg gctttcattt aaagcattca ccagaatatc gcgcttctgg cgataaaagt
     2341 ccggtaacgc aagataatgc tcaggttctg cacgtagcat atcagcaagc gccagctgtg
     2401 ccggggtatt caccgaaaag gtcagatact gatgtacctt gcgaatttcg gcgctgatgg
     2461 gcgctggcgc aacacaataa cccactttcc agccggtcat atgatagatc ttgccaaatg
     2521 aagaaaccgc cactgcccgc tcacgcagct gcggatgcgc cagcacactg gcatggccct
     2581 gttgtgaaaa gttgatgtgc tcgtagactt catcgctaat gacaaaaatc tcgtgcccgg
     2641 cgatcgcctg ccacaaagcg gcgaaatcag cctgctgcca gacagttgca ctggggttat
     2701 gcggagtgtt gaggatcacc agtctggtgc gctcgcttaa taatgcggca aattcctgcc
     2761 agtcaaggtg gttgcagtgc catacgcttc actattcccc cagaaagcgc gatggcgggg
     2821 gcgtaactgt catagctggg atcaaaacaa atcacttcat cgccattgcg caccagtgcg
     2881 gtaatcgccg cgtataacgc ttccgtcgcc cctgccgtta cggtgatatc gctatcggca
     2941 tctggttgat agccatacaa acgttccgtt ttctgagcaa tcgcctcgcg caaggcctgc
     3001 acgccggtca tgggcgcgta ttggtttgcc ccctgggcaa cgtggtacgc cagccgctcc
     3061 tgtaaatagc gcggaccatc aaaatcagga aagccttgcg acaggttaat cgcctggtgt
     3121 tgctgcgcca gcgcgctcat ctgggtgaaa atagtggtgc caagttgtgg aagtttgctt
     3181 tgtggaatca gagggttatt tgtcattttt attgtacctg acgaagttgc gtgttgaagg
     3241 cactataaca cgacgctagt atttggcaat caagacgttt agatgtctaa ataaaacaat
     3301 aaggacaaca caacatgcct cacaatccta tccgcgtggt cgtcggcccg gctaactact
     3361 tttcacatcc aagaagtttc aatcacctga acgatttttt cactgatgaa caactttctc
     3421 gcgcggtgtg gatctacggc aaacgcgcca ttgctgcggc gcaaaccaaa cttccgccag
     3481 cgtttggact tccaggggca aagcatattt tgtttcgtgg tcattgcagc gaaagcgatg
     3541 tacagcaact ggcggctgag tccggtgacg atcgcagcgt ggtgattggc gtcggcggcg
     3601 gcgcactgct cgacaccgcg aaagccctcg cccgccgtct cggtctgcca tttgttgccg
     3661 ttccgacgat cgccgctacc tgcgccgcct ggacaccgct ctccgtctgg tataacgatg
     3721 ccggacaggc gctgcattat gagattttcg acgacgccaa ttttatggtg ctggtggaac
     3781 cggagattat cctcaatgca ccgcaacaat atctgctggc ggggatcggt gacacgctgg
     3841 cgaaatggta tgaagcggtg gtgctggctc cgcaaccaga aacgttgccg ctaaccgtgc
     3901 ggctggggat caataatgcg caggccattc gcgacgtctt gttaaacagt agcgaacagg
     3961 cacttgccga tcagcaaaat cagcagttaa cgcaatcatt ttgcgatgtg gtggatgcta
     4021 ttattgctgg tggtgggatg gtcggtggtc tgggcgatcg ttttacgcgt gtggcggcgg
     4081 ctcatgccgt gcataacggt ctgactgtcc tgccgcaaac cgagaagttt cttcacggca
     4141 ccaaagtcgc ttacggaatt ctggtgcaaa gcgccttgct gggtcaggat gatgtgctgg
     4201 cgcaattaac cggggcgtat cagcgttttc atctgccgac tacgctggcg gagctggaag
     4261 tggatatcaa taatcaggcg gagatcgaca aagtgattgc ccacaccttg cgcccggtgg
     4321 agtccattca ttacctgcca gtcacgctga caccagatac gttgcgtgca gcgttcgaaa
     4381 aagtggaatc gtttaaagcc tgacgtgcaa atttagcagc agcgcgcgcc gccttttcca
     4441 ccgtagcgcg cgtcctgccg ctcacggaaa aactcctcgt aggtcatcgg cgtttgatcg
     4501 ggatggttaa cccgcatatg ttcgacatag ttgtcgtaat caggcatacc aatcatcagc
     4561 ttcgccgcct gacctaaata ttttccggct tttgccagtg aatcaaacat cttggcctcc
     4621 gctaaccatg ttgctgaaag agtgccggat gcggcgtgaa cgctttatcc ggcctacaaa
     4681 tgctatcaac gcactcggtc agtcccctcg ccccatcggg gagagggtta gggtgagggg
     4741 gaaccctcgg cactatgcca acattcgcca acatcccccc tcactctgac tttagtgcgc
     4801 gcctttcgcc tgcgctacga tctcctcgac attttccggc atcggctcat acggcgtttc
     4861 tttcgccgtt ggcttcggat ctttcaatgc cgcaagtgcc gtcttaatcg agaacagtgc
     4921 cagaaccacc acgaccacca taaagaagat ggttaacccg gcatccagac ggttgttgaa
     4981 caccagttgc gccagctgtg actcagtata ctgcgacgga atattgccgc tgtcgatcat
     5041 tgcctggaac ttgttagcaa tggccaggaa gccgactttc gcatccgggc taaacgcttt
     5101 ctgccagcca gcggtcaggg tacaaatcag cagccaggcc gttggtacca gcgccaccca
     5161 ggcgtaacgt tgacgtttca tcttgaacaa caccacggca cagagcatca gcgccatccc
     5221 tgccagcatc tggttggcaa taccaaacag cggccacaga gtgttaatac cgcccagcgg
     5281 atcgaccacg ccctgatgga ggaagtagcc ccacgccagt acgcacagcg ccgttgccag
     5341 caggttagca ggcagtgaat cggtccgctt caggccagga gacaccacgc ccagcagatc
     5401 ctgcaacata aagcgcgcag cacgcgtacc cgcatctacc gccgtcagaa taaacagagc
     5461 ttcaaataga atggcgaagt gataccagaa cgccacatcc atcataccac ccagcgcacc
     5521 gtgcaggatg taagccatcc ccaccgccaa cgtcggcgca ccgcccgcac gggaaatgat
     5581 cgactgttca cccacttcgc tggcaatctg gttgagcgta tctggtgtaa tgctaaagcc
     5641 ccagctactc accacctgcg cggcagaagc gaccacatcc gccgtccctg ctggagccag
     5701 caccgccatt gggctgttca tggcaaagta aacgcccgga tcgatgatac aggcggaaac
     5761 cagcgccata atcgccacga aggattccat taacattcca ccgtagccga taaaacaagc
     5821 ctgcccttcg ttcgccagca tcttcggcgt ggtgccggaa gagatcagcg catggaagcc
     5881 agacaccgcg ccacaggcga tggtgataaa caggaacggg aacaggttac cggtccatac
     5941 cgggccagtg ccatcgacaa atttggtcag cgcaggcatg gtcagcgtcg ggcgcataat
     6001 caaaatgcct accgccagac cgacgatcgt cccgattttc aggaaggtag agaggtagtc
     6061 acgcggggcc agcagcaacc acaccggcag caccgccgcc acaaaaccgt aacccaccag
     6121 catccaggtc agctgcacgc cggtaaagtc aaagtacggt gcccaggtcg gactttctgc
     6181 cacccagccg ccagagataa tggcgaaaat caggaatacc agaccgatga ccgacacttc
     6241 accaatacgc cccggacgca gatagcgcag gtagatcccc ataaacagcg ccagcggaat
     6301 ggtgaacgca acggtatacg ttccccacgg gctatgagtc agggctttca ccacgatcat
     6361 cgccagtact gcaaggataa tgaccatgat cataaagcag gccaccagcg ctatcacccc
     6421 ggcggttggc cccatctctt ctttgaccag ctcacccagc gatcgaccgt cacggcgcgt
     6481 agaaacaaac agcaccatga aatcctgcac cgcaccggcg agaaccaccc cggcgagtag
     6541 ccagatcatc cccggcaggt agcccatttg cgctgccagc accggcccaa ccaacggacc
     6601 tgctccggcg atggccgcaa aatggtgacc gaacagcact ttcttgtccg tcggcacata
     6661 gtccagcccg tcgttatggc gcaccgctgg cgtcatacgc ttcgggtcaa ccgccagcac
     6721 atttttggcg atatacaacc cataaaaacg gtaagcgatc agatagatac agaccgacgc
     6781 caccacaatc cacagcgcgt tgatctgttc cccacgattt aaagcaatgt atcccagagc
     6841 aaatgctccc attacagaga gcactgtcca gacgaggtat ttccctgatt tgttcatagt
     6901 tgttatccgt gtgcgtgtcc atagagatgt tacattttgt ttctataaca tctttgtacg
     6961 atttaacaac acggtaacta tgtaaatcgg agttgaaacc aatatttaac ttaacaatgt
     7021 taactcgatc actccgttaa ccgagttttc ctgcaatctc atttaattct gtcgggctca
     7081 tcccaaaact gccgtaccca gccgacaagt gcagcaacgc cgcccctgtt catcgaaaac
     7141 gacgatttcc cagctctgat tttgccgccc aagatgcagc ggctggcaga cgccgcgtac
     7201 cttgccttca gacaccgggc gatgatgggt ggcgttaagt tccgtgccca ccacacactg
     7261 cccgtcacgg gtcatcataa atccggccat cgatcccagc gtttcagcca gcgccgccga
     7321 cgcgccgcca tgcagcaggc caaacggctg atgagtacgg gtatcaaccg gcatttcggc
     7381 ttccagcaca tcatctccca gacgggtata cacaattccc agatgcgcca ccattgtgtt
     7441 atcgctggtg gcgttcagtt cgtcgagcgt taaatggcgt ttccagatca tgcttatgcc
     7501 cccagcgttg agccgccatc gaccacaata tcctgtaggg tgatatggct ggcgaggtca
     7561 gaggcgagga acaaaatcgt gttggcgatc tcttgtggac gggcgatttt ccccagcgga
     7621 atgccgagtt taaactgctc gccaaagccg cgaatacgct gttcttcggc gtcatcgctc
     7681 acccacagcg tgcgttgcat atcggtgtcg gtggagccag gcgaaaccac attacagcgc
     7741 acgccgctac ccgccagttc cagcccgacg ctcaacgcca ggcttttcag cgccgctttc
     7801 gatgcgccat aagcactcat accaatacgc ggcgtgtgtg cggcgtcgga cgccacagtg
     7861 acaatcgccc cgccccgctg acggcgaaac tggttcatgg tttgctggaa caggttaaac
     7921 gcaccgccga cgttaaccgc aaaagtctgc tgccagtcct ctttactgag ctgatcggtc
     7981 gcgcccatgc gcaaaattcc cgccgcattg atcagcacgt ccagtcgctc cgtttcagct
     8041 aacagtcgct gacatacctg cgccacctgc ccggcgtcgg caacatccat tacttcggtc
     8101 gcaaagggat attgctcctg agtgaacgct tgatcaaaac ctgtaacttt cgctcccgcc
     8161 tcaacaaacg ccagcgccgt ggcgtagccg atacctttac ctgcgccggt tacccagaca
     8221 tttttaccgc tgaaatccat tatttaacct cgcgggagag tagcttccac caggcgtcga
     8281 tggtcgggtt tttcgccagc atgacaaagt cgatatcacc atgcactttg cgccagcgcg
     8341 ccgccagcgc catcatgcgc accgaatcca gaccgtagtc gatcaggttg tcgtcatcga
     8401 acggttcatc ggactcgtcc agcaacggca ggataacctc acgcagcgcc gctttgctgg
     8461 cggggacagg tgctggcagt aattcttcag tcatcaccac ccggccagac cgcccggcca
     8521 catatttcag cgacatcaaa tgctcgtcac ggctgaaatc ggccagcgca tccgccacca
     8581 taaacggttt aatatcgcgc ataaatgcgt cggttgcggt ggtcatacag ccaatgtggg
     8641 catatacccc ggtaataatc agctggttac gtccactctc tttgagcatt tgctccagcg
     8701 gagaacgatg aaacgcgctg tagcgccact tcaccagcac cgtgtcgtcg gcatctggcg
     8761 tcaggcgatc caccaccttt tgctgttccg gcgaacgggt caggcccggc ccccacatat
     8821 cattcaacag cgcccgatct tcatcgctct gctctttcgg ctgggcggtg taataaactg
     8881 ggatattgtg ctgtttgcag tagtcgcgca gcgcagcaat attcgcgatc acctgctcca
     8941 tcatcgggca gttctcgccc cagaagctga caaaatagtc ctgcatatca tggattaaca
     9001 acgcggcacg ttgcagttca aaggcccagt caactttatt ctgcggaata tcgtgagact
     9061 ccggcagtgc gtaagcctgt aattttggaa tagccatcgt gttctctcct tcaggctgat
     9121 gcgcgtgacg ccagccactg acttaattgt tttttatcga ctttcccgac cgccgtcagc
     9181 ggaagtgaat ctacacactc cacgcgatcc ggtaatttaa attcggcaat accctgttca
     9241 cgcaggaaac gacgcacctg caccgcgcgc agcggctctt ttaccaccag ataagcacag
     9301 cttttttcgc ccatcagctc atcttccatg ctcaccagtg cggcatagat caccgccgga
     9361 tggcgcagca gcaggttttc gatctcttcg gcagcgatct tctcgccgcc acggttgatc
     9421 tgatctttct cgcgcccctg cacggtgatg taaccctctg gatcaataga gatcagatcg
     9481 ccggaacagt aaaaaccgtt ggcatcaaag gcgctggcat tgtgctgcgg acttttgtaa
     9541 taaccgcgga aggtgtacgg cccgcgcgtc atcaggcgtc cgacttcccc ttgcggcagt
     9601 ggatttcctt cggcatcggc aacccacact tcatcgtccg gacacattgg gtaaccctgg
     9661 gtatggataa ttttctccgc gctatcatca agacgggtgt agttcaccag cccttccgcc
     9721 atgccaaaca cctgctgcaa ctggcagcca atctcagcgg gaatacgcgc cgcaagggtg
     9781 gcagaaagac gtgcgccgcc gacctgtaac agtttcagcg aggcaagctg cgcccggctt
     9841 tcgccttcag ccagcgcctg caaccacagg ctgactgccg gcggcaccag cgcggtgacg
     9901 ttcacctgat gtttttcaat caatgggaag caaagcgtag cgctgggatc ggccgccaga
     9961 acaaccgttc ctccggcaag aaagacgccc agcgatcctg gcgaactcat ggcgtagtta
    10021 tgagccgccg ggatcgcgca caggtagcgc gtctgttgtg tgaactgaca aatctcgacg
    10081 ctacgacgca cgctgtagta gtagtcgtta tgagtgcgcg ggatcagctt cggtgtaccg
    10141 gtggtgccgc cggaaagctg gaaataggcc acttcatcag caggtgatgc cgtggcagta
    10201 aaaccgtctg ccggatggtt aatcgcatcc tgcaagttat gctcaccgct gtcgttgtgc
    10261 agttgcacca cgcgaatgga ggaatgttct gtgacgaaag tattgaggaa atcatccccg
    10321 ctaaacagcg catgttggcg atcggcaatc agcaatgcgg gttcaatctg gctggcatag
    10381 gcgttcagtt cactacgctg atggctgaac aacgccagca ccggcgcaac gcccagtttc
    10441 agcagcgcga aaaaggtaat atacaattca gcgacgttac ccagttgtac cagcgcggtt
    10501 tcaccaggtt taatgccctg acggcgtaaa gtacacgcga ggttatccgc cgcctgattc
    10561 agctcccggt aactcaactg tagctcgccg tcgataaccg cgatgctgtc actcgcagcg
    10621 tggcgagtca gaatgtcggt cagcggcaaa tcctgccagt agcctttttc ccgatagcga
    10681 cgggcaaact cttccggcca gcgggtgaat ggaatgctca tcctcgctcc ttaatgcaat
    10741 ccaaaaacat tcaacatggt agaaagtttg acgcctgttt cgcgccactc acccaacggt
    10801 gacgacgcaa gcacaatccc cgctccggca aacagacgca cctgattttc ccgcagcttc
    10861 gcgcagcgga tggtcaccac ccattcgccg ttaccttcgc tgtcacacca acccacaatg
    10921 ccgccaaaca gttcgcggtc gaacggctcc agttcagcaa taacctgagt cgcggcctga
    10981 tgcgggaaac cgctcagcgc gggggtcgga tgcagcagac aggccagagt cagtgcgttt
    11041 tcttgcgaat tcgctttacc ttcaaaggga gttgcgagat gccacagcgt cggcgtggta
    11101 atcaattgtg gagaggaggg aacgtgtaac tcactactgc gttcgcgcag tacctctttc
    11161 atcgcctgag tcaccagttc atgttcatgg cgatcttttt ctgacgccag cagacgatta
    11221 cccgcttcgc gatcgagcac ttcatccggc tgacgacgcg cggaaccggc taacggaatg
    11281 gagctaaaac gctcgccgtc tttacgtagc agcagttccg ggctggcccc cagcaggacg
    11341 ccaccatcag ccagcgggac atggaagttg taactaaccg ggttttgcgc aatcaaccgt
    11401 tccagcaata cgccactatc aatggcggcg tcagtggtga tatcaatcaa ccgtgacaac
    11461 accactttgt cgacctgcgg cgtggcggta agtgcggcag cgcgggcaac catctgttca
    11521 aacgtggttt gttccggaat tgcctggcgt tccaccacat tcagcgactg gctgcgggtg
    11581 aaacggcggg cggaagcttg tttttcctga cgggagaacg actgccagga ttcaggaata
    11641 tacagcgacg aaggctgacg tggatcgaag ggaatcgccc cgaccatcac cggatttttg
    11701 atgccctgca ctttggcatc ggcaaacagc gcggcgagtt tttgctggaa gggactgtcg
    11761 ggcgaatccc cgttcacagc cggttcatcg aagcgggcga aacatcctga cgtcgtaaaa
    11821 ctgcggtacg gcgacataaa gaaaaagcga ttgggcgcaa gtgttgccat ggtctgctgt
    11881 acttcctcag ccagtgacgt atccatatca tcctccacaa aatgataaag gctttaataa
    11941 tgattatcat ttatattttc ggtcgctaac ctaaaagcaa acgcgcacta tgtcaactct
    12001 tgaggtaacg caatctgcaa ctcggggttg catctggttg tggttacaat gaaaatgaga
    12061 agcattattg atggattcgc ataagcgcaa tgtgatgtcc tgcgccgttc ttccccctct
    12121 cccttccagg gagagggctg gggtgagggt caatattcgc accagtgctg gctgctccca
    12181 tcaccctaac cctctcccca aaggggcgag ggtacggata gtgcgctttg tcgaatttgt
    12241 cattacgccc ttaaccttat taataacagg aagctgattt gtgagactcg ccccgctcta
    12301 ccgcaacgcc cttctattaa caggactttt gctttccgga atagccgcag ttcaggccgc
    12361 cgactggccg cgtcagatta ctgacagccg gggcactcat accctggaaa gccagccgca
    12421 gcgtattgtt tccaccagcg tcaccctgac cggctcactg ctggcgattg atgctccggt
    12481 gattgccagc ggcgcgacca cgccaaataa ccgcgtcgcg gatgaccagg gctttttacg
    12541 ccagtggagc aaggtggcga aagaacgcaa actacaacgg ctctatatcg gcgaaccgag
    12601 cgccgaagcc gttgccgcgc aaatgccgga tctgatttta attagcgcaa ccggcgggga
    12661 ttcggcgctg gcgctgtatg atcagctttc caccatcgcc ccgacattaa tcatcaatta
    12721 cgacgacaaa agctggcagt cgctgttaac gcagcttggc gaaattaccg ggcatgagaa
    12781 acaagcggca gagcggattg cacagtttga taagcaactg gcagcggcga aagagcaaat
    12841 caaattaccg ccgcagccgg tcactgctat tgtctatacc gccgctgcac acagtgccaa
    12901 tctctggacg ccggaatcag cacaagggca gatgctggaa caactcggct ttacgctggc
    12961 gaaattgccc acagggttaa acgccagcca aagccagggc aaacgccatg acatcattca
    13021 gcttagtgga gaaaatctgg ctgcagggtt aaatggcgag tcactattcc tgttcgccgg
    13081 tgatcagaaa gacgccgatg cgatttatgc caatccactg ctcgcgcacc tgcccgcagt
    13141 acaaaacaag caggtttatg cgctgggaac cgagacgttc cgcctggatt actacagcgc
    13201 catgcaagtg ctggaacgac ttaaggcgct gttttaagca ttaactgtcg gacgctgtca
    13261 cctgcggcgg cgtctggcga aaacgtcgca actccaccag caccagcaat aacaacacgc
    13321 cgataatcaa caaaccaaaa ccgctcgcgc ttgcggaagc aaccggtgtc atcatcgctc
    13381 ccagaccgcc taacagcgcc gcgcctatgg catcgcccgt cacgttttgt gccgtccaca
    13441 aaccgttgat tcgccctaac attgcttccg gcgtttgcgt ttgcagcatt gtatattgca
    13501 gcaacgaact gaccgcactc agccagccga acagcgccag acaaaccacg cctaaaatcc
    13561 acatcggcat caggccaaat aaaccaatgg cgaggaacga tcccaacgtg gagagcaaca
    13621 tcaacaatcc tggtcgcgcg ctatgcgcca gtttcccact ggttaatgcg ccaatagccg
    13681 caccgagcgg gatcgccgca tagagaaaac caatctctgc cgccgacatc tgccagttgt
    13741 cagccagcgc cggatacagt acccgcaccg cgctcgccat cgtcaataaa ccacccagca
    13801 acgcaatccc gcccaccagc gggctggcga gcagaaaacg aaatcctgcc agtaatgatt
    13861 tcaacggatg ctcgcgcggc tgcggtggcg gtggcaacgc cggaaggctt aacaacggta
    13921 gcaaggtaat aaacgtgccc gccgccgcca gcccgtagtt ccaggctacg ccaccggtcg
    13981 ccagcaataa accgccaatc atgggcgaaa tcaccgaccc cagacgcacg gtcaacatgg
    14041 tgatcgcccc ggcctgcatt aagttttcac gccctaccag tgctggtgtc gccgccaata
    14101 gcgccgtaac gccaagcgat gcgaaaaaac catcccataa accaagtaaa tagattgcca
    14161 gcaatgacgg ctccggcagc agtgcattaa ggcacagtcc aatgaagcca atgccacagg
    14221 tgccgcgcgc cagcaaaatc acttttttgc gctcatagcg atccgccagc acaccgccaa
    14281 ccatcaggcc aacaaacatc gcgccgccgg tcagcgtcac cgaaagcccc accagccagg
    14341 tagaatgcgt catcatctgg atctgcaccg gcaccgcgac gccgagcaaa cccagagaca
    14401 caattgagat aaaacgagcg aggaatactg cgcgaaacgc cgggtgcgtt ttcaacaggc
    14461 tgaggttaag cagccaggat tgtttattca ttacaatgcc ttgccatcaa atattttaaa
    14521 tacctattct taggctgcac atgctaacat atccaaataa gatcgataac gataattaat
    14581 ttcattatca tggaagttcg tatgtctggt tctgttgccg tgacacgcgc cattgccgtg
    14641 cccggattgc tgttattact gattatcgcg acggcattaa gcctgctcat tggggcaaaa
    14701 tcactccccg cttccgtagt gctggaggcc ttctccggca cctgccagag cgccgactgc
    14761 accatcgtgc tcgacgcgcg actgccgcgc acccttgccg gtttactggc aggcggcgcg
    14821 cttggccttg ccggggcatt gatgcaaacc ctcacccgaa atccacttgc cgaccccggc
    14881 ttgcttggcg tgaacgccgg agccagcttt gccattgtgc tgggtgcggc gctgtttggt
    14941 tactcatccg cgcaggaaca actggcgatg gccttcgccg gggcgctggt ggcctcattg
    15001 attgttgcct ttaccggcag tcagggcggc gggcagttaa gtccggtgcg tttaaccctg
    15061 gcgggcgtgg cgctggcggc agtgctggaa gggctgacca gcggcatcgc cctgcttaat
    15121 cctgacgtct acgatcaact gcgtttctgg caagccggtt cgctggatat tcgcaatcta
    15181 cataccttaa aagtggtgct gatcccggtg ctaatcgccg gagcaaccgc gctattactg
    15241 agccgcgcgc tgaacagttt aagcctcggc agcgacaccg cgacggcgct gggcagtcgc
    15301 gtggcgcgca cacagttaat tggtctgctg gcgattaccg tgctttgtgg tagtgcgaca
    15361 gcggtagttg gcccgattgc ctttattggc ctgatgatgc cgcatatggc gcgttggctg
    15421 gtgggtgccg atcatcgctg gtcgctgccc gtaacgctgc ttgctacccc tgccctgctg
    15481 ctgtttgccg atatcatcgg gcgggtgatt gtgcccggtg aactgcgcgt ttctgtggtc
    15541 agtgccttta ttggtgcacc ggtgctgatc ttcctcgtgc gacgtaaaac gcgaggtggt
    15601 gcatgattta cgtctctcgc cgattactca tcacctgttt gctgcttatt tccgcctgtg
    15661 tggttgcagg tatctgggga ttacgcagcg gtgccgtcac gctggaaacc tcgcaggtat
    15721 tcgccgcgct gatgggcgat gcgccgcgca gtatgacgat ggtggtcacc gaatggcgtt
    15781 taccacgcgt gctgatggcg ctgttgattg gcgcggcact gggcgtcagc ggtgcgattt
    15841 ttcagtcgct gatgcgtaac ccgctcggca gccctgacgt aatgggcttt aacaccgggg
    15901 cgtggagcgg cgtgctggtg gcgatggtgc tgtttggtca ggacctgacg gctatcgcgc
    15961 tggcagcaat ggtgggcggc attgtcactt ctctgttggt ctggctgctc gcctggcgta
    16021 acggtatcga cacctttcgg ttgattatta tcggcatcgg cgttcgcgcc atgctggtgg
    16081 cctttaatac ttggctgttg ctgaaagcgt ctttagaaac ggcgctaaca gcgggtttgt
    16141 ggaatgccgg atcgctcaat ggcctgacgt gggcaaaaac ttcgccttcc gcacccatca
    16201 ttatattgat gctcattgcc gccgccttgc tggtgcggcg aatgcgcttg ctggagatgg
    16261 gcgatgatac cgcctgcgcg ctgggcgtca gcgtcgagcg ttcgcgtctg ttaatgatgc
    16321 tggttgcagt ggtgcttacc gctgcggcaa cggcgcttgc cgggccgatt tcctttattg
    16381 ctttagtcgc gccgcacatt gcccgacgca ttagcggcac cgctcgctgg gggctgaccc
    16441 aggcggcgct gtgcggagcg ctgttactgc tggcggccga tctctgcgcc caacaactgt
    16501 ttatgccgta tcaacttccg gttggcgtcg ttaccgtcag cctcggcggt atttacctta
    16561 tcgtcttgtt aattcaggag tctcgcaaaa aatgaccgaa tcagtagccc gtttgcgcgg
    16621 cgaacagtta accctgggat atggcaaata taccgttgcg gaaaatctga ctgtagaaat
    16681 tcctgatggt cacttcacgg caattatcgg accaaatggc tgtggtaaat ccacgttact
    16741 gcgtacctta agccgcctga tgacgcctgc tcacgggcat gtctggctgg atggcgagca
    16801 cattaaacat tacgccagta aagaagttgc acgccggatt ggtctgttgg cgcaaaatgc
    16861 taccacgccg ggcgatatca ccgtgcagga gctggtggcg cgtggacgtt atccgcatca
    16921 accgctgttt acccactggc gcaaagagga tgaagaagcg gtaacgaaag cgatgcaggc
    16981 cacgggaata actcatctgg cagatcaaag cgtggatacc ctttctggcg gacaacgcca
    17041 gcgagcgtgg atcgcgatgg tgctggccca ggaaacggca attatgctgc tcgacgaacc
    17101 cacgacctgg ctggatatca gtcatcagat tgatctactg gaactgttaa gcgaactgaa
    17161 ccgcgagaaa ggctataccc tggcggcggt gctgcacgat cttaatcagg cctgtcgtta
    17221 cgccagccat ttgattgcat tgcgggaagg gaaaattgtt gctcagggag cgccgaagga
    17281 gattgtcact gctgaactga ttgagcgcat ttatggtctg cgatgcatga tcattgacga
    17341 tccggtagcc ggaacgccgc ttgtggtgcc gctcgaacga acggcacctt caaccgcaaa
    17401 tagttaaact aagtggtctg ccatcatggc atcctgtttt ctggatgcca tcgcatagcg
    17461 caataacacg ctaccacaag ccaccatccc gccgatcagc gcggaaagga tcacaataat
    17521 cgccttaccc ggaccgtctt ttttcactgg caatgacggg cttaactgat atttaaacgg
    17581 cgtaaaattc acatcgttga catttgcttt tgttaattgc tcgacaagat actgccgatt
    17641 acgtaattca ccgttcagtt ccgcaacgtc agtaaccgct ttttcaattt ccagtttgcg
    17701 ttcaataccg tctgcgccga gagaaataga gaaatcgggg tcatctttaa cggcctgacc
    17761 attactgtat acgggctttt taattcctgc cgcgttggca atgtcgagtg aataattgag
    17821 gcgctgaatg tttgcatcaa gttgattttt cgttttaatg cgatcctgag ccagtttttc
    17881 tttttcaaac tgggttttga tctccagttt attacggacg ttttctatcg actctttcac
    17941 caccaacgca gagatataat cgatataccc gctcaaaacg gtctgcgcct ctttactggt
    18001 tggcgcggta aaacttagcg tccaggaggt atacagtgac ggttcatctt ttttcttact
    18061 ggcattgtca tcaaccgctt tcattttttc gctcaatgca acaatagcgc gatgcaaatc
    18121 cagttcatcg attttcgcct cttttaattg gtccatcaca taaggtgatg aacgcaggta
    18181 ctcttccagc aagctaacag actgaaactt cttgataaac aggttaaatg caccgccacg
    18241 gtcgatatta acatcgagat caagaacgcg gagtttggta aaggttttct ccaggtcctg
    18301 ccactgaatg gcttcggcgg gagtaataac ggctgagctg gtccattttt gcggcaggat
    18361 gaaagagatc agtaaacctg cgcaggcaaa tgcaaaaacg accgccatga ccgttttttt
    18421 ggcccgccat aaaacttcga ttagattaag taaatcaatt tcattactac tgggcgacgc
    18481 cagaggatac tcggaaaaat gagcgtcact tccctgttta atattcagtg atgacatggg
    18541 tataacctga aaatgagtcc aataggggga aatctccacg gcgctcactt taccagttgg
    18601 tgagaattat ccgaagctga agtttgtaaa ttccttccac tgaatgcaac attcactcta
    18661 tttaagagaa atattcatca aacctataaa tcaaacaaat aaaaaaccca taattatttt
    18721 ctgtaattat gggtttatag ataatattaa tttacctgtt tagcgttgcg cgaataatcg
    18781 gcccaatttt tacaaacgcc cctggagaga taatatccac atgcgcacaa tcctgacgat
    18841 agatatccag ctcggcaatc cagggcgacc aagcgcgttc ggggctcata ccttcctgaa
    18901 gcgtgcgttc agcaacaaac agcgtcgctt taccatcaaa cggtacgcta tgagcagtcg
    18961 tcagcagacg cacagcatca gcgtagttgc cttcaatggt ggtaaacaac tccgttgaag
    19021 tacttccctg ctgtgccgcc aggaaggcct cgcgttcgcg gttaatctcc gccagcactt
    19081 ccgggtccag accattagcc tctttttcct gccagttttg cgtttctggc ggccaggtat
    19141 ccagcaaacc aagaaatgcc acctgttcgc cacgggcacg cagtcgcgcc gcaatgccct
    19201 gcgccagcgt accgccaagg gaatacccca gcaggtaata agggccgtgc ggttgttgtt
    19261 caagtaacgt tgccagatgc gcttcacaga cttcatccag atttgccgcg gtatgcatgg
    19321 ggccattggg gcgcggcgac tgaatgccga taatcgacca ttgtggatcg atataacgcg
    19381 agagcacgct aaactgccag gcaaaaccgg atgccggatg gaaacaaaac agcgtcgggc
    19441 cattaccttc acgcaacggc agaatggttt cgaatcccat acgccgggtg ctgtcttctt
    19501 cagcatcaat aatcgttgcc agtttagcga cggttgacgc gaccatcact tgccccggcg
    19561 tcacctggcg ggcaacctgc cgacttaact gcgctgccag tttcattgcc agtagcgaat
    19621 gaccaccaag cgcaaagaaa tcagcatcgg catcctgcac gtcacaaccc agcaacgacg
    19681 cgaatgccgc ggcaataatc gtttcactgc ccgcttttgg cgcacgcccc ggcgcttgtg
    19741 ccttcagttc aggcaacggt aaggctttgc gatccagctt gccgttggcg ctaagaggta
    19801 acagtggaag ttgcagcaga accacgggca ccatatgtgg tggcaatgtt tcgcgaagct
    19861 gcgcctgtaa tgcgctggta tccaacggca gacctgattg cgacaccaga tagcccacca
    19921 actgacgcgc atcaccaccg gtggctgccg cctggttaat cacacaggcg tgggtaacgg
    19981 cttgttcgac atccggcagc gcctgcatca cgcgatcgat ttcgcccagt tcaatacgct
    20041 gcccgcgaat ttttagctga tcgtcactgc gcccgaggta ctccaccgcg ccgttatcca
    20101 gccagcgggc aacgtctccg gtacggtaca tccgttcacc agggacaaaa ggatcggcaa
    20161 taaagcggct ggcggtcaga tcgggtcgtc caagataccc ctgcgccagt tgaatgccgg
    20221 tgagatagag atcacccgcc acacccggcg gcaccggatg catcatcgca tcaagaatac
    20281 gcagacccgt attccatacc ggataaccaa tcggcacact gctgccgcgc acctgtgcca
    20341 gttcctcgcc aaaagccgga taccagctga catctaccgc cgcttccgtc gggccatata
    20401 gattatgcaa cggcacgctg gttaactgtt gccattcgcg gcataaatca gccggtaagg
    20461 cctcaccact acagaaaacc tgtttcaacg tcgcgcaact ctggcgagcg gtttgcggcg
    20521 tcagcgatgc aacaaatgct gccagcatcg acggcacaaa gtgcgtggtc gttacgccat
    20581 attcggcaaa gaattgctgc atagcgagcg ggtcgcggtg cgcttccggt tcagccatca
    20641 ccagtttagc cccggcaata aacggccaga aaaactccca caccgagaca tcaaaactgc
    20701 acggcgtttt ttgggcaacg acatcttcgc ctgtaagcag ataatgattt tgcatccaca
    20761 acaggcggtt aacgatagcc gtctgcccga ccattacccc tttcggcctg ccggtggagc
    20821 cagaggtaaa gatgatataa gccgtgtgat gcggttgtga aagttgcagc ggcgcactgc
    20881 cctgcggttt aagcggggcg ttatagcaaa ggttggttaa atctggaaca tcggcaaagc
    20941 gcggcagttg atcgtcggtg gtgattaaca gcgacggacg cgcatcttcc agcatcattt
    21001 tcaggcgatc gtccggatag ccggtatcca gcggtagcca ggccgcgcca gcttcaacta
    21061 tcgcatgtag cgccagggtc aaaaagaccg agcgcggtag cgccaccgcc acgctgtcgc
    21121 ccggtttaac gccacgctca cgcagcagat tcgccagcgc caccacctgc tcgcgcattt
    21181 cccgatagct gaactggtaa cgcgcatctg ccagcgccgg agcatccggt gtttttgccg
    21241 cttgttctgc caccagcgcg ctcagcgtgg tttctggaat ctcaacctga gtggcgttga
    21301 tctgcgccag ctgcgcatac tcacctggca gcataatatc gacatcgccg cacaacagcg
    21361 ccggatccgc ggcgaactgg gcaatcagca ttttcaggcg ttcagcatgc tggattaacg
    21421 ttggctcatc gtaacgctgt ttattggcga ggatctcaat actcaaatca ccgtgttcat
    21481 ccgggaacag ggccagttca aggtcattaa ccggaccggt tgccaaggta tgggtttgcg
    21541 cctgaacacc aggaatatcc agttggtaat caaatacctt gatattgagt accggaccaa
    21601 acagcggttc atcacctgcc gctcgcccgc tgtcacggac aatttgttcg gcatcgtaac
    21661 gttgatgacg acgcattttt ttcagttgtg ctgccagtcg ggttgccagt tccggcagcg
    21721 tttcttgcgc cgcaatgtga atacccaacg gcaaaacgtt gagcacgggt ccggtagccg
    21781 tcagcgccgc cgagcccagt cgacgcataa agataaatcc agcggcgtag tccatgcgat
    21841 tgcacaatcg ccccagccac aaagccgtca gcgcaagggc taaatcggta cgctgcacac
    21901 ctgaaagttg cgtagccaac tggcggaatt ccccgtcggt aaattccatt ttcagacgta
    21961 aaatatctgc cgaagcgctg cgccccggta aaggtgccgg agaaagtgac gcgggcggcg
    22021 gcagttgacg acgctgttct gcccagaatg ccgcatcacg ctgccaggct tcgctttcgc
    22081 ggtattgctg gtactcttcc actacatcag cgaaaggcgt aaacggcgaa gcaggcgttg
    22141 gttcaccacg cagccatgtg cagtaaatat tggcgatctg gcgggtaatg gccgggaaac
    22201 tgaagccatc gaccagcaaa tggtgataac gctgatacca gtaccagcgg ttatccgcca
    22261 cctgtatcag ctgatgaaag accagtggtt taccgctatc gacgcgcaga tcttgttgca
    22321 aatccgcctg cattaatgcc tgcgcagtac cgtgcggatc aatgttggtt cgcaggtcga
    22381 taatttctgg cagttcgaac gtcagcgcat catcgaccca ctgccagact tcgccgttat
    22441 cttccgtaaa acgcatccgc agcgtatctg cttgcgctag tccgtcaacc accgcgcggg
    22501 ccagtaatgg cgcatcaacc tctccggtta actcaacgta atgcgctacg ctccaggcgg
    22561 agggtaaatc cgacagtttt tctgccatcc agatgccggg ctgtgcggcg accaaaggta
    22621 aatgctggct cattgcgcct cctgcaactg ggtgaaattc gccggtgtca gagtacgcca
    22681 gtgggcttca agccactgct ggcaggactc ttgtgactgc ggctgacaca caatgtccca
    22741 gcctgccggt aaggcgcatt gttgcggcca cagactgaat tgcccctgcg cattgcgcaa
    22801 aatgtaaaac gctccctgtg gatcatcgaa gggattactg aatgccatat tcaactcctg
    22861 tcatggaaaa gtggttgcca gaggtcgatt agcccctgca tcaagccacc gcgccaacaa
    22921 agcgcatcat gtccgccgtc aacctgacgc cagaaaatgg attcttttat ggggtgtaat
    22981 tgcgcataca gcgcctgatt ggcccgcata atcatcggct cgcgaatacc cgcttccagc
    23041 acaatgcgca gaccttcggc gctaacttca ccagctttaa gcttttcaag taacacgccc
    23101 tcttgctgcc cgccccgatg cggccaccag tacgatcctg actggcttaa tacacaacca
    23161 aaacgttcag gccagtgcag tccggcatac agcgcggaaa gtccaccaaa actctgcccg
    23221 gcaaccacgg tgcgatcggc gcgatcgcta aaaggggcaa tagctttcac caggggtaat
    23281 aactcttgct gtactgcgag ccagaaatcc gcattacacg gcagttcgtg agcgcggtgc
    23341 gtggtgtcga tagcgtcgat caacacatac acggcgggag gaagttgctg acgatgggtc
    23401 agcgaagtca gcactggcca gacgggcata ctttgcgccc aaaattcgcc atcgagcaaa
    23461 actgccagcg ggcgttcttc tgctgttgca tcgccggtgg taaaaatcca tacacgacgt
    23521 gaatttttca accgttcact tttccagata atttctttgg ctggtatttc tggcgcttgc
    23581 ggacaatccc atcccggttg cagaggcgct tgcggcattt cgagtgcaga aacagcgtgc
    23641 cctcgcccgc ctttccagct ttgtggattc agcggatcgg ctattgcctg gggtaatagt
    23701 tttcgccagc cttcacgtaa ttcgaggcga tcgggggatg gtgcagaaaa aatgtcatcg
    23761 cgttcggtgg gaataaagca gtagctgccg cgccagttgg cattgagttg tgtcgtccac
    23821 tgccagacat cagtacctgc aatgcgctgc atcgactggg gctggctgtt ctgatgatga
    23881 tcggtcacac cagtgatgta gacccatacg cgctttatcg gcgagtattc ttcagaacct
    23941 tggggatcac gccaccagaa agtgacctca aacatttcgt cattcagacg ctgccattcc
    24001 gggccatgtt tcgactgcca ccagctctca cttcctactt ttaacgccgt cacaccataa
    24061 ccccatgttt actgtgcaat ttttcattga ttgcagaaat atattgataa tattattgat
    24121 aactatttgc atttgcaata gcgtaatggc gcgccgtggg aagcgcggac attaattaac
    24181 caactgcact gcgtgtcttt caggatcaaa ggttttcgcg gtagcgggat gcgtcgtgtt
    24241 gaggacgacc atgcccgaca gttgcaattc gtggcaaaaa tgcaggaata aaacaatgaa
    24301 caagaagatt cattccctgg ccttgttggt caatctgggg atttatgggg tagcgcaggc
    24361 acaagagccg accgatactc ctgtttcaca tgacgatacc attgtcgtta ccgccgccga
    24421 gcagaacttg caggcacctg gcgtttcgac catcaccgca gatgaaatcc gcaaaaaccc
    24481 ggttgcccgc gatgtgtcgg agatcatccg taccatgcca ggcgttaacc tgaccggtaa
    24541 ctccaccagt ggtcagcgtg ggaataaccg acagattgat attcgcggta tgggtccgga
    24601 aaacacgctg attttaattg acggcaaacc ggtcagcagc cgtaactcgg tgcgtcaggg
    24661 ctggcgtggc gagcgcgata cccgtggtga tacttcctgg gtgccgcctg aaatgattga
    24721 acgtattgaa gttctgcgtg gtccggctgc agcgcgttat ggcaacggcg cggcgggtgg
    24781 cgtagttaac atcattacca aaaaaggcag cggtgagtgg cacggttcct gggacgctta
    24841 tttcaatgcg ccagaacata aagaggaagg tgccactaaa cgcaccaact tcagtctgac
    24901 cggcccgctg ggcgacgaat tcagcttccg cttgtatggc aacctcgaca aaacccaggc
    24961 tgacgcgtgg gatatcaacc agggccatca gtccgcgcgt gccggaacgt atgccacgac
    25021 gttaccagcc gggcgcgaag gggtgatcaa caaagatatt aatggcgtgg tgcgctggga
    25081 cttcgcgcct ctgcaatcac tcgaactgga agcgggttac agccgccagg gtaacctgta
    25141 tgcgggcgat acccagaaca ccaactctga cgcttacact cgctcgaaat atggcgatga
    25201 aaccaaccgc ctgtatcgcc agaactactc gctgacctgg aacggtggct gggataacgg
    25261 agtgaccacc agcaactggg tgcagtatga acacacccgt aactcgcgta ttccggaagg
    25321 tctggcgggc ggtaccgaag ggaaatttaa cgaaaaagcg acacaggatt tcgtcgatat
    25381 cgatcttgat gacgtgatgc tgcacagcga agttaacctg ccgattgatt tcctcgttaa
    25441 ccaaacgctg acgctgggta cggagtggaa tcagcaacgg atgaaggact tgagttccaa
    25501 tacccaggcg ctgaccgggg cgaacaccgg cggcgctatt gatggtgtga gtgccaccga
    25561 ccgtagcccg tattcaaaag cagaaatttt ctcgctattt gccgaaaaca acatggagct
    25621 gactgacagc accatcgtaa cgccggggct gcgtttcgat catcacagta ttgtcggcaa
    25681 taactggagc ccggcgctga acatatcgca aggtttaggc gatgacttca cgctgaaaat
    25741 gggcattgcc cgcgcctata aagcgccgag cctgtaccag actaacccga actacattct
    25801 ctacagtaaa ggtcagggct gctatgccag cgcgggcggc tgctatctgc aaggtaacga
    25861 tgacctgaaa gcagaaacca gcatcaacaa agagattggt ctggagttca aacgcgacgg
    25921 ctggctggcg ggcgtcacct ggttccgtaa cgattatcgc aataagattg aagcgggcta
    25981 tgtggctgta gggcaaaacg cagtcggcac cgatctctat cagtgggata acgtgccgaa
    26041 agcagtggtt gaaggtctgg aaggatcgtt aaacgtacca gttagcgaaa cggtgatgtg
    26101 gaccaataac atcacttata tgctgaagag tgaaaacaaa accacgggcg accgtttgtc
    26161 gatcatcccg gagtacacgt tgaactcaac gctgagctgg caggcgcggg aagatttgtc
    26221 gatgcaaacg accttcacct ggtacggtaa gcagcagccg aaaaaataca actacaaagg
    26281 tcagccagcg gttggcccgg aaaccaaaga aatcagtcct tacagcattg tgggtctgag
    26341 cgcgacctgg gatgtgacga agaatgtcag tctgaccggc ggcgtggaca acctgttcga
    26401 caaacgtttg tggcgtgcgg gtaatgccca gaccacgggc gatctggcag gggccaacta
    26461 tatcgcgggt gccggggcgt atacctataa cgagccggga cgtacgtggt acatgagcgt
    26521 aaacactcac ttctgatgct aacgtcagat tgttgataaa gtgcgcgtcg ttcatgccgg
    26581 atgtggcgtg aacgccttat ccggcctaca aaaatcttgc caattcaata tattgcagga
    26641 ccatgtaggc ctgataagcg tagcgcatca ggcagtttag cgtttgtcac cagtctctaa
    26701 tatggtcgac atgaaaacta cgcatacctc cctccccttt gccggacata cgctgcattt
    26761 tgttgagttc gatccggcga atttttgtga gcaggattta ctctggctgc cgcattacgc
    26821 gcaactacaa cacgctggac ggaagcgcaa agccgaacat ttagccgggc ggatcgctgc
    26881 aatttatgcg ctgcgggaat atggctataa atgtgtgccc gcaatcggcg agctacgcca
    26941 accggtgtgg cctgcggagg tatacggcag tattagccac tgcggggcta cggcattggc
    27001 cgtggtttcc cgtcaaccga ttggcgttga tatcgaagaa attttttctg cgcaaacagc
    27061 gaccgaattg acagacaaca ttattacacc agcagaacac gagcgactcg cagactgcgg
    27121 tttagccttt tctctggcgc tgacactggc attttccgcc aaagagagcg catttaaggc
    27181 aagtgagatc caaactgatg caggttttct ggactatcag ataattagct ggaataaaca
    27241 gcaggtcatc attcatcgtg agaatgagat gtttgctgtg cactggcaga taaaagaaaa
    27301 aatagtcata actctgtgcc aacacgatta attgacaaca tctggtacga ttcgcccgca
    27361 gccatcactg accgcgggcg aaagtgtaaa gcaggtgcct taccatcctg acctgacaac
    27421 cggatatgcg gggattgctc cccgcacaac ggctacttct tcggttcgta agcgagaaca
    27481 gccttaaact caatattacg ttcctttacg gtgaactcac acagcgaatc cccgaccaga
    27541 agcgtaaatc ccagcaccgt taaacacagc actatgactg ccgcaagggc atatttcgtc
    27601 agcatgttta tattgcctcc atgcgaagaa gggactacca tccaaattgt tcaggtttgg
    27661 gtaggtagcc ccagggttga tagaaatatc gtcctggggc ttcatctttc cagacctcag
    27721 agtaaacctg aaaccggaaa gcttcaggca cccgcagtta tcttaccctt gcttagcaaa
    27781 atagctgttt atttatacag taagtcctgt ttcggacttc tcactcccca tttgatcaac
    27841 tgaagctgaa cccgtttttt tctgcatgcc tcaatcgtca aaattcttcg ccaccagtca
    27901 gcactgccat aacttgtcac attgcaaaag tagccaaatt gcttctgtca taatcagttc
    27961 accatcacca aaaaaaagaa acattccaga acttccgcat ctcgcccagc cgctcccact
    28021 tctatactga atagaaaacg ccaacataag agaaacctat gccattaccc gattttcatg
    28081 tttctgaacc ttttacactc ggtattgaac tggaaatgca ggtggttaat ccgccgggct
    28141 atgacttaag ccaggactct tcaatactga ttgacgcggt taaaaataag atcacggccg
    28201 gagaggtaaa gcacgatatc accgaaagta tgctggagct ggcgacggat gtttgccgtg
    28261 atatcaacca ggctgccggg caattttcag cgatgcagaa agtcgtattg caggcagccg
    28321 cagaccatca tctggaaatt tgcggcggtg gcacacaccc gtttcagaaa tggcagcgac
    28381 aggaggtatg cgataacgag cgctatcaac gaacgctgga aaactttggt tatctcattc
    28441 aacaggtgac cgtttttggt cagcatgttc atgttggctg cgccagtggc gatgacgcca
    28501 tttatttgct gcacggcctg tcacggtttg tgccgcactt catcgccctt tccgccgcgt
    28561 cgccatatat gcaaggaacg gatacgcgtt ttgcctcctc acgaccgaat attttttccg
    28621 cctttcctga taatggcccg atgccgtggg tcagtaactg gcaacaattt gaagccctgt
    28681 ttcgctgtct gagttacacc acgatgatcg acagcattaa agatctgcac tgggatattc
    28741 gccccagtcc tcattttggc acggtggagg ttcgggtgat ggataccccg ttaaccctta
    28801 gccacgcggt aaatatggcg ggattaattc aggctaccgc ccactggtta ctgacagaac
    28861 gcccgttcaa acatcaggag aaagattacc tgctgtataa attcaaccgt ttccaggcct
    28921 gtcgctatgg gctggaaggc gtcattaccg atccgcacac tggcgatcgt cgaccgctaa
    28981 cggaagacac cttgcgattg ctggaaaaaa tcgccccttc cgcacataaa attggtgcat
    29041 cgagcgcgat tgaggccctg catcgccagg tcgtcagcgg tctgaatgaa gcgcagctga
    29101 tgcgcgattt cgtcgccgat ggtggctcgc tgattgggct ggtgaaaaag cattgtgaga
    29161 tctgggccgg tgactaagta gggaattgcc ttacagaaga atatccctga caatggtgtt
    29221 ttaacttaca tttaacaatg ttatgaaaca ccctttagaa accttgacta ccgcagcagg
    29281 cattttgctg atggctttcc tctcttgcct gctgctgccc acccccgcac tggggctgac
    29341 gctggcacaa aaactggtga ccatgttcca tctgatggat cttagccagc tttacacttt
    29401 attgttttgt ctgtggtttt tagtgctggg cgctattgag tattttgttc tgcgctttat
    29461 ctggcgacgc tggttctcgc tggcggatta aacgtcgatt atcgccgtac ttcgcggcat
    29521 actttgctta ttctccttcg cctaaaggaa cgtttatgga taagcaatca ctgcacgaaa
    29581 cggcgaaacg cctggccctt gagttaccct ttgtcgagct ttgctggcct tttggcccgg
    29641 agttcgatgt ttttaaaatt ggcggcaaaa tttttatgct gtcgtcggag ctgcgcggcg
    29701 tcccctttat caatctgaag tccgatccac aaaaatccct gttaaatcag cagatatacc
    29761 cgagcattaa gccagggtat cacatgaata aaaagcactg gatttcggtg tatcccggcg
    29821 aggaaatctc cgaagcgtta cttcgcgatc tgatcaacga ttcgtggaat ctggtggttg
    29881 atggtctggc taaacgcgat caaaaaagag tgcgtccagg ctaaagcgga aatctatagc
    29941 gcatttttct cgcttaccat ttctcgttga accttgtaat ctgctggcac gcaaaattac
    30001 tttcacatgg agtctttatg gatatcattt ctgtcgcctt aaagcgtcat tccactaagg
    30061 catttgatgc cagtaaaaaa cttaccccgg aacaggccga gcagatcaaa actctcctgc
    30121 aatacagccc atccagcacc aactcccagc cgtggcattt tattgttgcc agcacggaag
    30181 aaggtaaagc gcgtgttgcc aaatccgctg ccggtaatta tgtgttcaac gaacgtaaaa
    30241 tacttgatgc ctcgcacgtc gtggtgttct gtgcaaaaac cgcgatggac gatgcctggc
    30301 tgaagctggt tgttgaccag gaagatgctg atggccgctt tgccacgccg gaagcgaaag
    30361 ccgcgaacga taaaggtcgc aagttcttcg ctgatatgca ccgtaaagat ctgcatgatg
    30421 atgcagagtg gatggcaaaa caggtttatc tcaacgtcgg taacttcctg ctcggcgtgg
    30481 cggctctggg tctggacgcg gtacccatcg aaggttttga cgccgccatc ctcgatgcag
    30541 aatttggtct gaaagagaaa ggctacacca gtctggtggt tgttccggta ggtcatcaca
    30601 gcgttgaaga ttttaacgct acgctgccga aatctcgtct gccgcaaaac atcaccttaa
    30661 ccgaagtgta attctctctt gccgggcatc tgcccggcta tttcccctca gattctcctg
    30721 atttgcataa ccctgtttca gccgtcatca taggctgctg ttgtataaag gagacgttat
    30781 gcaggattta atatcccagg ttggggattt agcgggtatt gagatcgatc acaccacctc
    30841 gatggtgatg attttcggta ttatttttct gaccgccgtc gtggtgcata ttattttgca
    30901 ttgggtggta ctgcggacct tcgaaaaacg tgccatcgcc agttcacggc tttggttgca
    30961 aatcattacc cagaataaac tcttccaccg tttagctttt accctgcagg ggattatcgt
    31021 caatattcag gcggtattct ggctgcaaaa aggcaccgaa gcggcagata ttctgactac
    31081 ctgcgcgcag ttgtggatca tgatgtatgc gctgctttca gtcttctcgt tgctggatgt
    31141 tattttgaat ctggcgcaga aattcccggc ggcatctcag ttaccgctga aagggatatt
    31201 tcaggggatt aaactgatcg gcgcaatcct ggtcggcatt ttgatgatct cgctgctgat
    31261 tggtcagtcg ccagcgattc tgatcagcgg tcttggtgca atggctgccg tgctgatgtt
    31321 ggtatttaaa gatccgattc ttggtctggt ggcaggtatt cagctttccg cgaacgatat
    31381 gctgaaactg ggcgactggc tggagatgcc gaaatacggc gcggatggcg cggtgatcga
    31441 tattgggtta accaccgtca aagtgcgtaa ctgggacaat accattacca ctattcccac
    31501 ctggtctctg gtttctgact cctttaaaaa ctggagcggg atgtcagcat ctggcgggcg
    31561 acgtattaag cgcagtatca gtattgatgt caccagtatt cgttttcttg atgaagacga
    31621 aatgcaacgt ctgaataaag cgcacttgtt aaaaccttat ttaaccagcc gccatcagga
    31681 aattaatgag tggaatcgcc agcaaggttc tacggagtcg atattaaacc tgcgccgaat
    31741 gaccaatatt ggaacctttc gtgcctatct gaacgaatat ctgcgtaacc atccgcggat
    31801 tcgtaaagat atgaccttaa tggtacgcca actggctcca ggtgataacg gtttaccgct
    31861 cgagatctac gcgtttacca acaccgtggt gtggctggaa tatgaaagca ttcaggctga
    31921 tatattcgat cacatatttg cgattgtcga agagtttggt ctgcgacttc atcagtcgcc
    31981 agccggcaat gatattcgct ctctggcggg tgcatttaag cagtaattaa aaaaaccgct
    32041 ctcatcgaat ggatgagagc ggacatcgtt ttgtcggatg tagcgtgaat gccttatttc
    32101 cgacgcagcg ttttaaatgc cacaaacagg aatacaatcc acaccggcag caggatcgct
    32161 gacaagcgca tatcatccat cgtgcacatc agcagcaaaa tcatgccgag gaaggcaatg
    32221 caaagatagt tgccgaacgg ataaagcagc gccttaaact gtgtttcacg tccctgacgt
    32281 cgcatcgccg cgcgaaaacg cagatgcgcc aggcagatca taatccagtt caacagcagc
    32341 gttgctacca ccagcgccat cagcagacca aacgcttttt gcggcagcag atagttgatt
    32401 aacaccacca gcgaagtgat cgctccggaa agcatcagcg agttaatcgg cacgccgcga
    32461 tggctgacgc gagtcaaaaa cttcggcgca ttaccctgca cagaaaggcc aaacagcatg
    32521 cggctgttag agtaaacccc gctgttatac actgacagcg atgctaccag aatgacgaag
    32581 ttcagcgcag aagctacctc gttgctgtcg agattatgga aaatcatcac aaacgggcta
    32641 ctgttggatt tcacttccac ccacggatag agcgccagta aaaccaccag tgaacagatg
    32701 taaaacagca ggatgcgata caccacctga tttaccgctt ttggaatgct tttttccgga
    32761 tcgcgcgctt cagcggcagt aatcccaatc agctccagac cgccgaagga gaacataatt
    32821 accgccagcg acaaaatcag cccattccag ccggtggcga agaaaccacc gtagcgccag
    32881 aggttgtcga tactggcttt ctcgccgccg tgaccagaaa acagcagcca caggccaaag
    32941 ccgatcatac cgatgattgc cagcacttta atcaacgcaa accagaactc ggtttcgcca
    33001 tataagcgca cgttcaccag gttaacggcg ttgatgataa taaagaaggc ggcagcccaa
    33061 atccacgttg gaacatccgg gaaccagtac tgcatataga tgcccgcagc ggtcagctct
    33121 gccattccca ccagcacgaa cattacccag tagttccagc cagagaggaa gcccgcaaac
    33181 ggtccccagt atttataggc aaagtgggca aatgaaccgg ataccggctc ttcgaccacc
    33241 atctcgccga gctggcgcat aatcaggaaa gcgatgatcc cggcgacgcc gtagcccagc
    33301 aatacagccg gacccgccat ctgaatcgcc gggccaatgc caagaaacag accagtacca
    33361 attgcgccac ccagcgcaat cagttgaata tgacggttat gtaatccgcg atgaagcgtc
    33421 ggctcttgat ttgacgcagt atcttccgat acggttgacg cgtttttcac gcctttcccc
    33481 tgtgtgtctt ttttgttgag gggcaccttt taacatttag tgcccatcgt cgcaagacac
    33541 aatccacacg gttaaacggg gtatcctgct tttatttccg tacccgatgt cggtgcagcc
    33601 acatcagctt atacgccgcc gggataataa acagcgacag caaaggcgcg gtgatcatgc
    33661 cgccaatcat cggtgcggca atccggctca tcacctctga accagccccc gttccccaca
    33721 gaatcggcag cagaccggcg ataatcaccg ccaccgtcat cgctttcggg cgcacgcgca
    33781 gtaccgcgcc gtgatacaac gcctcatcca gcttctgctc actgaatgtt tgcggattat
    33841 tcaacgacgg ctcggcctct atggcgtgac gtaaatacat cagcatcacc acgccaaatt
    33901 cggcggcgcc cccggcaagg gcaataaaac cggtgcccgt tgccacagaa agatgaaagc
    33961 ccatccacca cagcaaccag atgccgccca ccagcgcaaa cggtacgctg ctgataatca
    34021 gcaacgcttc gcccacccga cggaatgcca gatacaacag cacgaagatg atcatcagtg
    34081 tcatcggcac catgagtttc agcttatggt tggcgcgctc cagtagctcg aactgcccgg
    34141 agaatgccac gctggtgccc ggttttaact gcactttttc aactatcgct ttttgcaaat
    34201 cgtgaaccac cgacaccatg tcacgatcgc gggcatcgat ataaatccag ctcgtcgggc
    34261 gcgcattctc ggttttcagc atcgacggtc cggtagagac tttaacgtcg gccacgtctg
    34321 ccagggtgat ttgctgcttc atcggcgtca ggatcggtag ctggcgcagt gcctgctttg
    34381 cggataacgc agattaatgg gataacgggc aatcccttcc accgtttcgc caaccatcgc
    34441 cccgcccacc gcagaagtca caaacaactg cacatccgcc accgtcatac cgtaacgcgc
    34501 ggctttttca cggttaatct caacgttgat atagcgccca ccttccagac gctcggcaag
    34561 cgcagaagcc acgcctggca ccgttcgcgc tacttcttca atttgctcag ccatcgcgtc
    34621 gatatccgcc agcacagtgc cggaaacttt aatgccgatg gggcttttaa tgccggttga
    34681 gagcatatcg atacggttac gaattggcgg cacccacaga ttcgccagcc ccggcagccg
    34741 cacggtgtta tccagttcct caatgatttt gtccatcgtc atgccaggcc gccactgatc
    34801 ctgcggctta agctggatgg tcgtttcaac catctcgagc ggagcagaat cggtggcggt
    34861 ttccgctttc ccggttttgc caaatacccg cgccacttca ggtacgctca taattagctt
    34921 gtcgtttttt tgcagcatac tcgccgcctc tgctgcggaa atccccggca gcgtcgatgg
    34981 catatacaac aagtcgcctt cattgatctg cggtaaaaat tccccgccaa ctttattgag
    35041 cggccagaga accgtcagca ccgaaagcgc tgccaccaac agcgtggttt tcggccagtg
    35101 cagtactttc agcaatagag gatgataaac acgaatcaaa aagcgattga gcgggttact
    35161 gctttccggc ggaattttgc cacggatcca gtaacccatc aggatcggga tcactacgat
    35221 cgccagcagc gccgcacccg ccatcgcata cgttttggtg aacgccagcg ggccaaacag
    35281 acgcccttct tgcccttcca gggtgaagat tgggataaac gacagcgtga taatcagcag
    35341 actgataaac agcgccggcc ccacttcaac agatgcatcg gtaatcacct gccagcgcgt
    35401 tttattatcc agcgtggcgt caggatgctg gtgctgccac tcttccagcc gtttatgcgc
    35461 attctcgatc atgacgatag cagcatcgac catcgccccg acggcaatcg caatgccacc
    35521 caacgacata atattggcat tcagtccctg gaagggcatg acaataaaag caatacacaa
    35581 ccccagcggc aacgaaataa tcgccaccag cgccgagcgc acatgccaga gaaacagcgc
    35641 acagactacc gccaccacaa taaactcttc cagcaacttg ccgctgaggt tgtcgatggc
    35701 gcggtcaatg agctggctgc gatcgtatgt tgtaactatc tccacgcctt ccggcagact
    35761 acttttcagc gtttccagtt tgtccttcac ggcggcgatc acttctcggg cgtttttacc
    35821 ggagcgcagg atcaccaccc cgcccgccac ttcgccttcg ccgttcagtt cggcaatgcc
    35881 ccggcgcatc tccgggccaa cctggacctt cgcaacatcg cgcagataaa cgggcacgcc
    35941 attttcactg gcttttaaaa cgatgtgatt aaagtcgtcg agcgtttgca gatagccgct
    36001 ggcgcgcacc atatattccg cttccgccag ttcgatcgac gaaccgcccg cttcctggtt
    36061 tgaagcatcc agcgcgcttt ttacttcggc gagactgatg ccatactgcg ccaggcgctg
    36121 gggatcgata accacctgat actctttcac cacaccgccc accgacgcca cttccgcaac
    36181 gtcagggatg gttttcagct catatttgag aaaccagtcc tgtaatgagc gtaaatcggc
    36241 cagatcgtgc ttaccgctgc gatccaccag tgcatattca tagatccagc caacacccgt
    36301 ggcatctggc cccagctcgg cgctgactcc cgcaggcagc ttaccctgta cctggttgag
    36361 gtactccagc acccgcgaac gcgcccagta cggatcggta ccatcttcga aaatgacata
    36421 cacataagag tcgccaaact gcgagaaacc acgcacagtc ttcgcgccag gcaccgacaa
    36481 catggtggtg gttagcggat aagtcacctg attttcaacg atttgcggtg cctgcccggg
    36541 atagctggtt ttaataatca cctgcacatc ggagagatcc ggcagcgcat ccactggcgt
    36601 attaatgatg gtccaggtgc cccagatgct aagaaacaac gcgcccatca gcaccaaaaa
    36661 acggttcgcc accgagcgac gaataatcca ttcaatcatt ggttattccc tcaatgcgca
    36721 tgggtagcac tttcagagcg catccgctcc agtgcgccag aaatattggc ttcggaatca
    36781 atcaggaaaa ggccgctgga aaccaccttt tcaccttccg ccagaccaga gcgtaatgcg
    36841 gtgacacctt gcgatgcctg gaaaacggca acgcgtttcg gtacaaagcg cccgtcggca
    36901 tcaatggtaa tcacccgctg ttcgctaccg gtatcaatca gcccttgtga cggaatgagc
    36961 agcatcggtt cgctggcggt attgagttgc aaccaggcgt tcatgcccgg ttttagcgcc
    37021 tcgtcggcgt tgtcgacttc cagacgcagc tgcagcgtgc gggtcgcggc atccacgccg
    37081 ggtagcagcg tccatttgcg gatggtgagt gttttatccg gtcgtgccgg aacggtgagc
    37141 gtaaactgcg aggcatcttt caccagccag gcgatagact ccgggatcgc agcagtgacc
    37201 cacaccgggt ccataccctg aattttcgct accacgttat ctttggcgat attcattccc
    37261 gcgcgcagat caaacgcggt gatcacgcca tcaatgggcg ctttgagcgt aaagcgagtc
    37321 tggatttttt gcgtggcgat caggcggcga atatccgcct ccggcattcc cgccagtcgc
    37381 agccgctcaa gaatgccttc agtctgggtc gccgtaccgc cggtttcgcg cagcagtaaa
    37441 tactcactct gcgcttccac ccagtcagga atggtcaggt cgagaagcgg tgtgcccttt
    37501 tgtactttat cgcccacggt aagcggatac accttgtcga taaacccggc agcgcgagcc
    37561 tgcacaatgg catactgata ctcgttgtaa ctgacattcg ccgggaaact ctgggcaaaa
    37621 gtcagcggtc cgcgcgtgac ggtagccgtt ttcaccccca gattctgcgt ctgagtcggg
    37681 tcaatgcgca caccagacgc agaactctct tcatcggcat atttcggcac cagatccata
    37741 tccataaacg gcgatttacc tggtttatcg aaccgcgtat tggggtacat cgggtcgtac
    37801 cagaataaga ttttacgt
//
LOCUS       DADMIB010000018        37610 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.018, whole genome shotgun sequence.
ACCESSION   DADMIB010000018 DADMIB010000000
VERSION     DADMIB010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37610)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37610)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37610
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.018"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1985
                     /locus_tag="JNZ89_000921"
     CDS             <1..1985
                     /locus_tag="JNZ89_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catecholate siderophore receptor Fiu"
                     /protein_id="HAY8934867.1"
                     /translation="VGAFLAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDT
                     FNTEQVEVIKGPSGTDYGHSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVN
                     QVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHN
                     TPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDI
                     NDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILT
                     NQTNLTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTR
                     NGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATACGGSGRGAITCP
                     AGVAKGSPVTTVDTAKSGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQS
                     GSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQY
                     GKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLW
                     SQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLN
                     VYNLFDTDYVASINKSGYRYHPGKPRTFLLTANMHF"
     gene            1991..2704
                     /gene="ybiX"
                     /locus_tag="JNZ89_000922"
     CDS             1991..2704
                     /gene="ybiX"
                     /locus_tag="JNZ89_000922"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706682.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKHD-type hydroxylase YbiX"
                     /protein_id="HAY8934868.1"
                     /translation="MWGAGPTFWRNCMMYHIPGVLSPQDVARFREQLEQAEWVDGRVT
                     TGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNN
                     ETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGD
                     LVLYPSSSLHCVTPVTRGVRVASFMWIQSMIRDDKKRAMLFELDKNIQSLKSRYGENE
                     EILSLLNLYHNLLREWSEI"
     gene            2778..3044
                     /gene="ybiI"
                     /locus_tag="JNZ89_000923"
     CDS             2778..3044
                     /gene="ybiI"
                     /locus_tag="JNZ89_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc finger protein YbiI"
                     /protein_id="HAY8934869.1"
                     /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGA
                     PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR"
     gene            3309..3569
                     /locus_tag="JNZ89_000924"
     CDS             3309..3569
                     /locus_tag="JNZ89_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY8934870.1"
                     /translation="MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG
                     ASTLDALEAKLTEKAAAAGASGYSITSATNNNKLSGTAVIYK"
     gene            complement(3797..4882)
                     /locus_tag="JNZ89_000925"
     CDS             complement(3797..4882)
                     /locus_tag="JNZ89_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate/lactate/ureidoglycolate dehydrogenase"
                     /protein_id="HAY8934871.1"
                     /translation="MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAG
                     HDSHGIGMIPSYVRSWSQGYLQINHHAKIVKEAGAAVTLDGDRAFGQVAAHEAMALGI
                     EKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRF
                     GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA
                     VMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII
                     INPELFGAPDCSAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQEQGIPLDAGS
                     WQAICDAARQIGMSEETLQAFCQQLAS"
     gene            complement(5023..5985)
                     /gene="ybiB"
                     /locus_tag="JNZ89_000926"
     CDS             complement(5023..5985)
                     /gene="ybiB"
                     /locus_tag="JNZ89_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein YbiB"
                     /protein_id="HAY8934872.1"
                     /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG
                     VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA
                     ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
                     FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI
                     GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQ
                     WIERCLAGSEPIPESLKIQMACCLEATGEAATISDGLARVNQAF"
     gene            complement(6013..8163)
                     /gene="dinG"
                     /locus_tag="JNZ89_000927"
     CDS             complement(6013..8163)
                     /gene="dinG"
                     /locus_tag="JNZ89_000927"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HAY8934873.1"
                     /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG
                     EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK
                     IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK
                     GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAE
                     VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL
                     DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH
                     RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRA
                     LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR
                     SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRFE
                     PSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD
                     QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI
                     TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR
                     LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR"
     gene            8283..8765
                     /gene="ybiA"
                     /locus_tag="JNZ89_000928"
     CDS             8283..8765
                     /gene="ybiA"
                     /locus_tag="JNZ89_000928"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosidase YbiA"
                     /protein_id="HAY8934874.1"
                     /translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTW
                     PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRNRSKPLRKNWESVKEQVMRKALR
                     AKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGNGKGKNRLGYLLMELREQLAIEK
                     "
     gene            complement(8997..10361)
                     /gene="rhlE"
                     /locus_tag="JNZ89_000929"
     CDS             complement(8997..10361)
                     /gene="rhlE"
                     /locus_tag="JNZ89_000929"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlE"
                     /protein_id="HAY8934875.1"
                     /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS
                     AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
                     NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
                     MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD
                     QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
                     GNKSQGARTRALADFKSSDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
                     RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ
                     QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP
                     AAAQ"
     gene            10590..11261
                     /gene="cecR"
                     /locus_tag="JNZ89_000930"
     CDS             10590..11261
                     /gene="cecR"
                     /locus_tag="JNZ89_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CecR"
                     /protein_id="HAY8934876.1"
                     /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNTTTREIAAQAGQN
                     IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRA
                     CRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA
                     NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL
                     SQRSL"
     gene            11261..12259
                     /gene="hlyD"
                     /locus_tag="JNZ89_000931"
     CDS             11261..12259
                     /gene="hlyD"
                     /locus_tag="JNZ89_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HAY8934877.1"
                     /translation="MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRT
                     VNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQVKAGVSVAQAQYDLML
                     AGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA
                     TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTR
                     AVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQ
                     IGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGNEAGHE"
     gene            12252..13988
                     /locus_tag="JNZ89_000932"
     CDS             12252..13988
                     /locus_tag="JNZ89_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8934878.1"
                     /translation="MNDAVITLNGLEKRFPGMGKPAVAPLDCTIHAGYVTGLVGPDGA
                     GKTTLMRMLAGLLKPDSGNATMIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN
                     LYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
                     LLDEPGVGVDPISRRELWQMVHELASEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
                     GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD
                     DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKE
                     LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD
                     LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL
                     KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE
                     KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ
                     LIHDWDKEHSNE"
     gene            13981..15114
                     /locus_tag="JNZ89_000933"
     CDS             13981..15114
                     /locus_tag="JNZ89_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8934879.1"
                     /translation="MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG
                     YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG
                     LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
                     FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS
                     TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL
                     GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV
                     STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD"
     gene            15125..16231
                     /locus_tag="JNZ89_000934"
     CDS             15125..16231
                     /locus_tag="JNZ89_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8934880.1"
                     /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
                     VTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP
                     ADFSRKLDTFQTAPLQLILDGRNSNSAQIATNYLQQIVKNYQQELLEGKPKPNNSELV
                     VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
                     FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
                     LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
                     DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM"
     gene            complement(16193..16603)
                     /locus_tag="JNZ89_000935"
     CDS             complement(16193..16603)
                     /locus_tag="JNZ89_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934881.1"
                     /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL
                     CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL
                     AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR"
     gene            16736..17487
                     /locus_tag="JNZ89_000936"
                     /pseudo
     CDS             16736..17487
                     /locus_tag="JNZ89_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308895.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
     gene            17484..18725
                     /gene="clsB"
                     /locus_tag="JNZ89_000937"
     CDS             17484..18725
                     /gene="clsB"
                     /locus_tag="JNZ89_000937"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsB"
                     /protein_id="HAY8934882.1"
                     /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE
                     DNVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNKLTAAGVVFRYYDPRPRLF
                     GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDIL
                     QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ
                     ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK
                     GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD
                     NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWHPAHTPRLTQVDP
                     PAQPTMETQDRVETENTGVKP"
     gene            18791..19681
                     /locus_tag="JNZ89_000938"
     CDS             18791..19681
                     /locus_tag="JNZ89_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000636449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HAY8934883.1"
                     /translation="MIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYG
                     CYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTIT
                     RIFSLSITTNWLGYILLAGIIFTAGVVVLPDHWYVAQTTLRILGIGLLMIIAVYLWFC
                     AFAKHRHMTIKGQKLVLPSWKFALTQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVL
                     LVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGSIIAALLAYRVLYYFIPLLLALI
                     CYLLLESQAKKLRAKNEAAM"
     gene            complement(19717..20430)
                     /locus_tag="JNZ89_000939"
     CDS             complement(19717..20430)
                     /locus_tag="JNZ89_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HAY8934884.1"
                     /translation="MESYSQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYL
                     EITATKYDSPTMYVAIGLLLVCMYGLSKDINKINAVIAGVIYLFLLSLVAIVVASLVP
                     VYAIIIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVIIVNAALMSERP
                     IWVISCLVIVLWPGIISHGRNKLLELAGKCHSEKLWSPVRCAFTGALTLYYYFIGFFG
                     ILAAIAITLVWQRHTRFFH"
     gene            complement(20636..21340)
                     /locus_tag="JNZ89_000940"
     CDS             complement(20636..21340)
                     /locus_tag="JNZ89_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HAY8934885.1"
                     /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN
                     SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS
                     IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
                     LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGKQIDTRDTSNLRKYSILGALTLYLD
                     FINLFLMLLRIFGNRR"
     gene            complement(21477..21929)
                     /gene="moaE"
                     /locus_tag="JNZ89_000941"
     CDS             complement(21477..21929)
                     /gene="moaE"
                     /locus_tag="JNZ89_000941"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HAY8934886.1"
                     /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG
                     DSVKALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFAGVTSA
                     HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW"
     gene            complement(21931..22176)
                     /gene="moaD"
                     /locus_tag="JNZ89_000942"
     CDS             complement(21931..22176)
                     /gene="moaD"
                     /locus_tag="JNZ89_000942"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HAY8934887.1"
                     /translation="MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWAL
                     ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG"
     gene            complement(22169..22654)
                     /gene="moaC"
                     /locus_tag="JNZ89_000943"
     CDS             complement(22169..22654)
                     /gene="moaC"
                     /locus_tag="JNZ89_000943"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HAY8934888.1"
                     /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
                     IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL
                     CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD
                     D"
     gene            complement(22657..23169)
                     /gene="moaB"
                     /locus_tag="JNZ89_000944"
     CDS             complement(22657..23169)
                     /gene="moaB"
                     /locus_tag="JNZ89_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HAY8934889.1"
                     /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV
                     VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
                     GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR
                     PCNFHPHLKK"
     gene            complement(23191..24180)
                     /gene="moaA"
                     /locus_tag="JNZ89_000945"
     CDS             complement(23191..24180)
                     /gene="moaA"
                     /locus_tag="JNZ89_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HAY8934890.1"
                     /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK
                     GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG
                     YRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK
                     VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL
                     RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF
                     GEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG"
     regulatory      complement(24168..24312)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            24577..25485
                     /gene="yvcK"
                     /locus_tag="JNZ89_000946"
     CDS             24577..25485
                     /gene="yvcK"
                     /locus_tag="JNZ89_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HAY8934891.1"
                     /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
                     GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
                     ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP
                     IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV
                     YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL
                     EASDIPYRHDRQLLHNALEKALQALG"
     gene            complement(25677..27698)
                     /gene="uvrB"
                     /locus_tag="JNZ89_000947"
     CDS             complement(25677..27698)
                     /gene="uvrB"
                     /locus_tag="JNZ89_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HAY8934892.1"
                     /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG
                     KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLH
                     LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
                     EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE
                     NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
                     LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
                     SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL
                     VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
                     ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP
                     MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
     gene            complement(28277..28954)
                     /gene="bioD"
                     /locus_tag="JNZ89_000948"
     CDS             complement(28277..28954)
                     /gene="bioD"
                     /locus_tag="JNZ89_000948"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706656.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HAY8934893.1"
                     /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGS
                     EKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAG
                     LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA
                     QAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK
                     YINLALL"
     gene            complement(28947..29702)
                     /gene="bioC"
                     /locus_tag="JNZ89_000949"
     CDS             complement(28947..29702)
                     /gene="bioC"
                     /locus_tag="JNZ89_000949"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HAY8934894.1"
                     /translation="MATVNKQAIAAAFGRAAAHYEQHAELQRRSADVLLAMLPQRKYT
                     HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATA
                     TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERP
                     HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL
                     TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE"
     gene            complement(29689..30843)
                     /gene="bioF"
                     /locus_tag="JNZ89_000950"
     CDS             complement(29689..30843)
                     /gene="bioF"
                     /locus_tag="JNZ89_000950"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HAY8934895.1"
                     /translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF
                     SSNDYLGLSHHPQIIRAWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRA
                     LLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLAR
                     LLASPCPGQQLVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG
                     SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYNTSMPPAQAQAL
                     RASLAVIRRDEGDARREKLVSLIARFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL
                     AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG"
     gene            complement(30840..31880)
                     /gene="bioB"
                     /locus_tag="JNZ89_000951"
     CDS             complement(30840..31880)
                     /gene="bioB"
                     /locus_tag="JNZ89_000951"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HAY8934896.1"
                     /translation="MAHRPRWTLSQVAELFEKPLLDLLFEAQQVHRQHFDPRQVQVST
                     LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW
                     KNPNERDMPYLEQMVQGVKDLGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF
                     YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES
                     VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
                     FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT
                     PDTDEYYNAAAL"
     gene            31967..33256
                     /gene="bioA"
                     /locus_tag="JNZ89_000952"
     CDS             31967..33256
                     /gene="bioA"
                     /locus_tag="JNZ89_000952"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HAY8934897.1"
                     /translation="MTKDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRR
                     LIDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQP
                     LECVFLADSGSVAVEVAMKMALQYWQAKGEVRQRFLTFRNGYHGDTFGAMSVCDPDNS
                     MHNLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAG
                     GMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKAL
                     TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ
                     QVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRP
                     FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ"
     gene            33315..33791
                     /locus_tag="JNZ89_000953"
     CDS             33315..33791
                     /locus_tag="JNZ89_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase inhibitor"
                     /protein_id="HAY8934898.1"
                     /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK
                     SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG
                     YDGAAPPKGETHRYIFTVHALDVEHIDVDEGASGAMVGFNVHFHSLASASITAMFS"
     gene            33943..35226
                     /locus_tag="JNZ89_000954"
     CDS             33943..35226
                     /locus_tag="JNZ89_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative acyl-CoA thioester hydrolase"
                     /protein_id="HAY8934899.1"
                     /translation="MNTFSVSRLALALAFSVTLTACSSTPPDQRPSDQTAPGTSSRPI
                     LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD
                     AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA
                     DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT
                     LGDSVDAGNHPAVALRTDGDQVQINNVNILGCQNTFFVTNSGVQNRLETNRQPRTLVT
                     NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN
                     AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD
                     DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK"
     gene            complement(35367..37604)
                     /locus_tag="JNZ89_000955"
     CDS             complement(35367..37604)
                     /locus_tag="JNZ89_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HAY8934900.1"
                     /translation="MFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMD
                     KLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVF
                     GLSAAQRYGGIFVPPHIAIIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGE
                     LVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVG
                     PGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYY
                     DGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLL
                     DKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
                     AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQM
                     SAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQ
                     PLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEF
                     TLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMV
                     YAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEV
                     GDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFN
                     KNRQM"
BASE COUNT         8810 a        10180 c         9741 g         8879 t
ORIGIN      
        1 gcgtgggtgc gtttttggcg ggtgagaacg gtaactccac cactggcgac gccatttata
       61 tgcgtggtgc cgatacctct aacagtattt atattgatgg cattcgcgat atcggcagcg
      121 tctcgcgcga caccttcaat accgagcagg tcgaagtgat taaagggccg tccggcaccg
      181 actacgggca cagcgcaccg acgggctcga tcaatatgat cagcaaacag ccgcgcaatg
      241 attccggcat tgacgcctcc gccagtattg gcagcgcctg gttccgccgc ggcacgctgg
      301 acgtcaatca ggtcattggt gataccaccg cggtgcgcct gaatgtaatg ggcgaaaaaa
      361 cgcacgatgc cggacgcgac aaagtcaaaa atgagcgtta cggcgtcgcc ccttctgtcg
      421 cttttggcct tggtacagcg aatcgtttgt atcttaatta tctgcatgtc acccagcaca
      481 acacgccaga cggcggcatt ccgaccatcg gtttgccggg ctattctgcc ccatctgcgg
      541 gaacggcggc cctgaatcat tccggaaaag ttgatactca taacttttac ggcacggatt
      601 ccgattacga cgattcgacc accgacaccg ccaccatgcg ttttgagcac gacatcaacg
      661 ataacaccac cattcgcaat actacccgtt ggtcgcgcgt aaagcaggat tacctgatga
      721 cggcgattat gggcggggcg tcgaatatta ctcagcccac cagcgatgtg aatagctgga
      781 cctggtcacg cacggcgaat accaaagatg tgagtaataa aattctcacc aaccagacca
      841 acctgacctc gacgttctat accggttcta tcggtcatga tgtcagtacc ggcgtggaat
      901 ttacccgtga aacgcagact aactacggcg ttaatccggt gacgttaccc gcggtaaata
      961 tttatcatcc tgacagcagc attcatcccg gcggcctgac gcgcaacggc gcaaacgcca
     1021 atggtcagac ggataccttc gcaatttacg cctttgatac gctgcaaatc acccgtgatt
     1081 ttgagctgaa cggcgggatc cgtctggata attatcatac tgaatatgac agtgccaccg
     1141 cctgcggcgg cagcggacgc ggtgccatca cctgcccagc tggtgtggca aaaggttctc
     1201 cggtcaccac cgtcgacacc gccaagtcgg gcaatctggt gaactggaaa gccggggcgc
     1261 tgtatcacct gacggaaaac ggtaatgtct atattaacta tgccgtttcc cagcagcctc
     1321 cgggcggcaa caacttcgcc cttgcgcagt ctggcagcgg taacagtgcc aaccgcaccg
     1381 attttaaacc gcaaaaagcc aacaccagcg agattggcac caaatggcag gttctggata
     1441 aacgcctgtt gctcaccgcc gcactgttcc gtactgatat cgaaaatgaa gttgagcaaa
     1501 atgatgacgg aacttactcg caatacggta agaaacgtgt cgaaggctat gagatatccg
     1561 tggccgggaa tatcactccc gcgtggcagg tgattggcgg ctatacccag caaaaagcaa
     1621 ccatcaaaaa cggcaaagat gttgcccagg atggttcctc atcgctgccg tataccccgg
     1681 agcacgcctt caccttatgg agccagtatc aggcaaccga tgatatctct gttggcgcgg
     1741 gcgcacgcta tatcggcagt atgcataaag gttcagacgg cgcggtggga acgccagcgt
     1801 ttaccgaagg ttactgggtc gccgatgcca aactggggta tcgggttaat cgcaatctcg
     1861 acttccagct aaacgtttac aacctgtttg ataccgatta cgtcgcctca atcaacaaga
     1921 gcggctaccg ttatcacccg ggcaagccaa gaaccttctt gctcacagcc aatatgcatt
     1981 tctgattcag atgtggggcg caggccccac tttttggaga aattgtatga tgtaccacat
     2041 tcccggcgtg ttatcgccac aggacgtcgc tcgttttcgc gaacaactgg aacaagccga
     2101 atgggtggat ggacgcgtca ccaccggcgc acaaggtgcg caagttaaga acaatcaaca
     2161 ggtagacacc cgcagcacgt tatacgccgc cctgcaaaat gaggtgctga acgcggttaa
     2221 ccaacatgct ttattctttg ccgcggcctt gccgcgtacc ctttccacgc cgctgtttaa
     2281 tcgctatcag aacaatgaaa cctatggttt tcatgtggat ggcgcagtac gcagccatcc
     2341 acaaaacggc tggatgcgca ctgacctttc tgccacgctg tttttaagcg atccacaaag
     2401 ctacgacggc ggcgaactgg tcgttaatga caccttcgga caacatcggg taaaactccc
     2461 ggcaggtgat ctcgtgttgt atccctccag cagcctgcat tgcgtgacac ccgtaacccg
     2521 cggcgtacga gtggcatcat ttatgtggat ccagtcgatg atccgcgatg ataaaaagcg
     2581 cgccatgctg tttgaactag acaaaaatat tcagtcgctg aaaagccgct atggtgaaaa
     2641 tgaagagatc ctgtcgctgc tcaatcttta tcataatctg ctgcgggaat ggtcggagat
     2701 ctgacgcttg aactgcccag gttcgtccct atattagcta cacttaactg tacaagcatt
     2761 gatatgggga ggacgatatg gcatccggtt gggctaacga tgacgccgtc aacgaacaga
     2821 tcaacagtac aattgaagat gcgattgccc gcgctcgggg tgaaattccg cgtggcgaaa
     2881 gcctgtatga atgtgaagag tgcggtgccc ccatcccgca agcccgtcgg gaagccattc
     2941 ctggcgtgcg cttatgtatt cattgtcagc aggagaaaga tttacaaaaa ccagcgtata
     3001 caggatataa tcgcagaggt tcgaaagaca gccagttacg ttaactacaa ctggcgagat
     3061 gcatagcgag tataatttgt attttgcgtg gcattccgtg cctttaacgc tgctgtgact
     3121 gccacgcggc ataaaacaag tccataagta caacaaataa atggtttatc agtatgttag
     3181 atgtcaatca atttatttga acaaggcggt caattctctt cgattttatc tctcgaaaaa
     3241 aaacgtgata ctcatcacat cgacgaaaca acgtcactta tacaaaaatc acctgcgaga
     3301 gattaattat gaaaactatc aatactgttg ttgctgctat ggctctttca actctatcat
     3361 ttggcgtgtt cgcggcggaa ccggtaacgg catcccaggc acagaacatg aataaaatcg
     3421 gcgtggtttc tgccgatggc gcatccaccc tcgatgccct ggaagcgaaa ctgactgaga
     3481 aagccgcggc agccggtgcc agtggataca gcatcacttc tgccaccaac aacaataaat
     3541 taagcggtac tgcggtaatt tataagtaat tcgtaggacg gataaggcgt ttacgccgca
     3601 tccggcaaca gatgcctgat gcgacgctac cgcgtcttat caggcctaca aaatccgaac
     3661 cgttggacgg atcaggcggt tacgctacgt ccagcacaag tatttccctg tctgtttgcc
     3721 gacagacgca tatgctctaa ccctcattga tcctatatta cccttgtttg cccgtccgtt
     3781 actagacggg ctttttttag ctggctaact gctgacagaa agcctgcaac gtctcttccg
     3841 acataccaat ctgccgcgcc gcatcacaaa tggcctgcca gcttcccgca tccaatggaa
     3901 tcccctgctc ctgccgttcg cgacgcgtgt tcacttccca ctcgcccggt agcaaaatcg
     3961 gcttatcgtc atcatgcggc gaggctttca cccactcggc aaaggcttca gtctgcgcgc
     4021 tacaatccgg cgcgccgaac agttccgggt tgatgatgat agtggtcatg cagttaagaa
     4081 tggcatcggg actggtttgt aacgtttcct gatgcgtcgt tttaccgcca gaaagcgccc
     4141 cgccaagaat ttcacacatc gctgcaaggg cgtagccttt atgttcggca aaggtcaaca
     4201 gcgaccccaa cggcgactcc tgcattaccg ccggattggt cgtcggcacg ccgttaacgt
     4261 caatcaggca acctggcggc acggggacgc ctttatgcca ggcgacgcga gttttaccaa
     4321 atgcgatggc gctggtggcg taatcaagca acagcgggaa attatcttta cgagggaaaa
     4381 ccacacagaa cggattggtg ccaaagcggc tgtcgcgacc gtggaacggt gcgaccattg
     4441 gaataccgac cacgctaaca aagtggatag agacaaaccc cgccgctgca cactgctccg
     4501 cccagtaacc gatacggccg atatgatgcg agttatgtag cgccacggca gcaataccgt
     4561 gctgatgcgc tttctcaatc cccagcgcca tcgcttcgtg tgccgcgacc tgaccgaatg
     4621 cgcgatcgcc atcgagcgtg actgccgccc ccgcctcttt aacgattttg gcatgatggt
     4681 taatttgcag atacccctga ctccaggaac gcacatagct tgggatcatg ccaataccat
     4741 gagaatcatg ccctgccagg tttgccgcga ttaaatgatc ggccactaat ttcgcttctt
     4801 gttcctcgct acccatctga cgaaatacag cctgaataaa actgtgcagc gtctgagcat
     4861 caaagcgatg accactttcc atggttaact cctgtttatg ttatgtgttt gttgtttttt
     4921 tatgctgcac gccgggcgcg ggaaggtcaa taaagatgca ggaatttcat attgcggtgg
     4981 ggtaaaagcc ggatgacatg gctcatccgg ctgagaaaag aattaaaatg cctgattaac
     5041 gcgcgccagg ccgtcgctga tagttgccgc ttcacccgta gcctccaggc agcaagccat
     5101 ctggattttc agcgattcgg gaatcggttc gctgccagca aggcaacgct caatccactg
     5161 cgccgtggtt tctgggtctt ttgcttgtgg cagtaactcg ctaccagcag tgtcctgttt
     5221 ttcatacagc acccgcatcc cttcacggtc aatgagattg atctgcgggc agcgctgcgg
     5281 attagcatac acttcgcctt cagtaccatg cattagtagc gcccgcccgc cgatatcgct
     5341 aaagaacttc gcgactcgcc cgatgtattc cggatgcgaa acgctggaaa gacgcagcgc
     5401 ctcaccttcg gcaaatggcg tcgccagttt cgccagggta tgtgcactgt tacgcacgcc
     5461 catccgccag cgcatcgcca gttgtttttc cagcggcggg caaaacgcgc cgacaggcat
     5521 aaacaccggt tgatgttcgt cgagcttcgc ctgcgcctgc ccgccgtgca acgttggtgt
     5581 aatacccatc agttcgaaaa tggtttctgt cagcacgcga gttggatctt cgctaacccc
     5641 gtgaaccacc acaggaaaac cgagtttgtg caggagaata gccaacaacg gcgtcaggtt
     5701 ggcctgttta cgcgcgccgt tgtaactggg gatgacaatc ggcatcggct tgcctgcagg
     5761 cggcgtcagc ttgatggtgt gattttgcat ggcttcgtaa aagccgagca tctctgcttc
     5821 cccttcccct ttgatacgta gcgcaatcaa tacgccgccc aactcaaggt cagggacttc
     5881 accattgagc atatgggcat acagaccgcg cgcagtatcc cggtctaaat cgcgcgcgtg
     5941 gtttttcccg cgcccgatct ctttaatgat tttgcgatag tccatttacg actccttacc
     6001 tgactcacat cattaacgcc gccgacggcg tggggatttc gttttttctt tctttttaac
     6061 tataccttca gggacttccg gttgctctat cggaaatacc ggtaatgcat ccagtagtcg
     6121 cttgccataa tttttggtca gcaagcgttt gtcgtagata accacttcgc cccagcaacc
     6181 gtggcttcga atcagtcgcc caacctgctg aatcaggtta aacgaggcgc tcggcaggct
     6241 ttgcacctca aacggatagc ggttgaggct tttcagccat tccccttcgg tgatcaccac
     6301 cgggctgtcg atgggcggaa aagcgatttt gtggatatgc acctggctga gcagatcacc
     6361 tttcaaatca agcccttcgg caaatgactg taagcccacc agcacactac gctcaccgtt
     6421 ggcaacgcgt ttgcggtgca gttcaactaa gcgataacgc ggctgatcgc cctgcaccag
     6481 cagcatcagg cgtaaatccg tcacatagtc gagaaagcgc tgcatcgccc gtccgctggc
     6541 aaacagtacc aacataccga gatgtttttt gctctccacc tgctcacgga aaaaggccgc
     6601 catttcggca atatgctgct cttcgttgtc gatggaaggc tcaaagcgca tccggggaat
     6661 aacaattttg ccctgttcgc agtggttaaa gggggaatcc agcgccacaa aacggtcgcc
     6721 cgctttctct ttcagcccgc tcatctcctg caaacgcgaa aaactgttca gcgaacgcaa
     6781 ggttgcggag gtgacaataa tgtgcggaat actgcgccac agcagccttt ccagctgatc
     6841 gctgacacgt attcccacgc agtgaaacca gagatgcagc tgcccttcgc gctcttcccg
     6901 cgtcgcccat ttggtcaccg gcgcaccgga agattgcgcc agagacgcca gccgccagag
     6961 tttgctttgc gcctcgaaca tccccaacgc gcggttcatc tgcaaaatca accgatgcag
     7021 acgcacaata tcgtggctgc cggttttctc acttaaatcg ttaagaaata actccgccag
     7081 accacgcagc atctcggtga gttttgccag ccgctggcag atctccagca cttcatcagg
     7141 cagttcgccc atcgcaaaac ggtgctctgc ctcctgcccg gcaggcatgt agagattgag
     7201 aatgttgttt aacgaggcga taagctcata caactcttca caatgcgcat tcaaacgttc
     7261 agggatcgcc agcggtggga tggtcttcgg gcgaaactgc tccatgcagg tagcgaccag
     7321 tttcgtgaac aagtccagct gtagtcgata ccagggcgcg gtgatttcag cgctcatctc
     7381 cagcgcatcc cgggccacat ctggcaggtg atgaccttcg tccagcacca gcagcagatt
     7441 tttcgggtca ggcagtacgg cttcgctttc catcgccgcc atcaccagcg catggtttgc
     7501 caccaccact tccgcttcct gaatctcccg acgagcaaca aaaaacgggc attcacgata
     7561 gtagtaacag ttacggttaa ggcagctggc tttgtcggta ctcaaacgac gccagagatc
     7621 atcatctata gcgatatccg tatgatcgcg cagaccatcc catttataag tgtcgagatc
     7681 gcccttcagc ttcgcacaac gtttttgctc ttcctgatta tttggcgtca gttcgtcgtc
     7741 aagaaacgcc agcagatcct gttgcgtggg ttcagtgctg gcgagcgccg tcagattacg
     7801 cggacaaacg tagcgcccac gcccgaaagc ggcagtgaat ttaagatcgg gaatgatctt
     7861 tttcagcagc ggtaaatctt tgctgtaaat ctgatcctgc aacgccacgt tggcggtact
     7921 caccaccagc gttttttgct cttcgcgggc aatggcgatg ccggggatca aataggagag
     7981 cgttttccca acgccggtgg gggcttcaat cgccagatgc cgcccttctt ctccggccag
     8041 cgttttggcg acgtccgcaa tcatctgccg ctgcggcgca cggggaataa agtcggggat
     8101 ctgttcctga agcgccttat accaggcggc aatttgcgct ttaagcgcgg cggttaatgc
     8161 catgagaaaa cctgaaatac tgtataaaca gccaatattg tggcattttt cggttttcag
     8221 gggtaatggt ttttctgttt ctggaaagcg gctcgcaata accaccaaca taatgcggtt
     8281 taatgcccgt tcgagcacaa aggatccaac acgtcatgca agacaccatc ataaatttct
     8341 acagcaccag cgatgactac ggtgattttt ctaactttgc cgcctggccc atcaaggttg
     8401 acgggaaaac ctggcccacc tccgaacact attttcaggc acaaaaattc cttgatgaaa
     8461 aataccgcga agagatccgt cgggtttctt cccccatggt cgccgctcgc atggggcgta
     8521 atcgttccaa gccacttcgt aaaaactggg agtcggttaa agaacaggtg atgcgtaaag
     8581 cacttcgtgc taaattcgaa cagcatgcag aactgcgtgc gctcttgctg gcaaccgcgc
     8641 ccgcaaaact ggttgagcat acggaaaacg atgcttactg gggagacggt ggtaatggta
     8701 agggcaagaa tcgactgggc taccttttaa tggagttgcg cgaacaattg gctatagaga
     8761 agtaacgtct cggtggctta tgggcggtaa aacagataaa ttttttcccg tgttctcaaa
     8821 ttgctgacaa gtgcttgttg tgaaatgccg gatgcggcgt aaacgcctta tccggcctac
     8881 aaaagcatgc aaattcaata tattgcagag ttaacgtagg cctgataagc gtagcgcatc
     8941 aggcagtttt gcgtttgttc atcagcctga tgccgggcat agcccggcat aaaagattac
     9001 tgcgcagcgg caggtttacg cggacggcgg cgacgttgtt gttcgcctgc cggtttggca
     9061 tcgccgaggc ggcgagacgg tttttctgca ggtttcgcgc ttgcagattt tgcgccacct
     9121 tccccacggc gtggttgctg ttgaccgcga ccaccacctt gcccacgacc gccgccgcca
     9181 cgttgctggc gaccgttctg gatcggttcg gctttgattg acgggtccgg ctcatagccc
     9241 ggaatcgcaa tgcgcgggat ctcttttttc agcagttttt cgatatcacg cagcagtttg
     9301 tgttcatcaa cacacaccag cgacaacgct tcaccggtag cagccgcacg accggtacgc
     9361 ccgatacggt ggacataatc ttccggtacg tttggcagtt catagttgac gacgtgcggc
     9421 aactcttcga tatccagacc gcgcgcagcg atatcggtcg ccaccagtac gcgaatgtca
     9481 ctcgatttaa aatcagccag cgcacgggta cgcgcacctt gcgatttatt cccgtggatc
     9541 gccgcactac ggatgccatc tttattgagc tgctcagcca gatggttagc gccgtgtttg
     9601 gtacgggtaa acaccagcac ctgctgccag ttccctttac caatcatgtg cgacagcaat
     9661 tcgcgtttgc gtttcttatc gacaaagtga acgtgctggg tcacctgatc agacgcggta
     9721 ttgcggcgtg ccacttcgat ttccagcggg ttgtgcaaca gtttttccgc cagggcttta
     9781 atatcgtcag agaaggtcgc agagaacagc aggttctggc gtttcgctgg cagttttgtt
     9841 aacacgcgac ggatatcgtg gataaagccc atgtcgagca tgcggtcagc ttcatcgagg
     9901 acgaggattt caacctgatc cagcttcact gcattttgat gttccaggtc cagcaaacgt
     9961 cccggtgttg ccaccagaac atcaacgccg ccgcgcagct tcatcatttg cgggttaatg
    10021 ctgacaccgc caaacaccac cagcgaacga atgttcaaat atttgctgta atcacggacg
    10081 ttttcgccaa tctgcgcagc cagttcacgg gtcggggtaa gaatgagcgc acgtaccgga
    10141 cgacgccctt tggcgtgcgg ctggcgagtg atcaggtgtt gcaacagcgg cagcgtaaag
    10201 cccgctgttt taccggtacc ggtctgggcg ctagccatca ggtcgcggcc ttccagcacc
    10261 gcagggatcg cctgctgctg aataggggtg ggttcacggt aaccctgctc ggcaacggcg
    10321 cgcaggatat cagggcttaa acccaaagaa tcgaaagaca taactactcc gaaccgcccc
    10381 gaccgttacc ggtgtagttt tcagggagat actgaaaagg aaaatgacaa aaaccacaat
    10441 gtcatgaggg agcggagtgt agcagttttt gtgacgcagc gcataaatta tccctgtgac
    10501 tggcgttgct aaaattctta gccatactgg acaactcccc tatggagtca taatcttaat
    10561 caatcatttg attaagaatg gactgtgcga tgaataatcc tgccatgaca atcaagggtg
    10621 aacaggcgaa aaaacagctg attgctgccg cactggcgca gtttggtgaa tatggaatga
    10681 acaccaccac tcgcgagata gccgcccagg ccgggcagaa tatcgctgcc atcacctact
    10741 acttcggttc gaaagaagat ttgtacctcg cctgcgccca gtggattgcc gattttattg
    10801 gcgagcagtt ccgtccgcat gccgaggaag ccgaacgctt gttcgcgcaa ccacagcctg
    10861 atcgggctgc catccgtgaa ctgatccttc gcgcctgcag gaacatgatt aagctgctca
    10921 cccaggatga caccgtcaac ctcagcaagt ttatctcccg tgagcagctc tctcccacgg
    10981 cagcctacca cctggtgcac gaacaggtga ttagtccgct acacagccac ctgacacgcc
    11041 tgattgccgc ctggaccggc tgcgacgcca atgacacccg catgatcctt catacccatg
    11101 cgttgattgg tgagattctg gcgttccgtc ttggcaaaga aacaattctg ttacgtaccg
    11161 gctggaccgc gttcgatgaa gaaaagaccg aactgatcaa ccagacggtg acctgtcata
    11221 tcgacctgat tttgcaagga ttatcgcaaa ggagtttgta gtgatgaaaa aacctgtcgt
    11281 gatcggactg gcggtagtgg tacttgccgc cgtggttgcc ggaggctact ggtggtatca
    11341 aagccgccag gataacggcc tgaagctgta tggcaacgtg gatattcgta cggtgaatct
    11401 tagtttccgt gttggggggc gcgttgaatc gctggcggtg gacgaaggtg atgcgatcaa
    11461 agcgggccag gtgctgggcg aactggatca caagccgtat gagattgccc tgatgcaggt
    11521 gaaagcgggc gtctcggtgg cacaggcgca gtatgacctg atgcttgccg ggtatcgcga
    11581 tgaagaaatc gctcaggccg ccgcagcggt gaaacaggcg caagccgcct atgactatgc
    11641 gcagaacttc tataaccgcc agcaaggact gtggaaaagc cgcaccattt cggcaaatga
    11701 cctggaaaat gcccgctcct cgcgcgacca ggcacaggca acgctgaaat cagcacagga
    11761 taaattgcgt cagtaccgtt ccggtaaccg tgaacaggac atcgctcagg cgaaagccag
    11821 cctcgaacag gcgcaggcgc aactggcgca ggcggagctg aatttacagg actcaacgtt
    11881 gatagcaccg tctgatggca cactgttaac gcgcgcggtg gagccaggca cggttctcaa
    11941 tgaaggtggc acggtgttta ccgtttcact aacgcgtccg gtgtgggtgc gcgcttatgt
    12001 tgatgaacgg aatcttgacc aggcccagcc ggggcgcaaa gtgctgcttt ataccgatgg
    12061 tcgcccggac aagccgtatc acgggcagat tggtttcgtt tcgccgactg ctgaatttac
    12121 cccgaaaacc gtcgaaacac cggatctgcg taccgacctc gtctatcgcc tgcgtattgt
    12181 ggtgaccgac gccgatgatg cgttacgcca gggaatgccg gtgacggtgc aattcggtaa
    12241 cgaggcagga catgaatgat gccgttatca cgctgaacgg cctggaaaaa cgctttccgg
    12301 gcatgggcaa gcccgccgtc gcgccgctcg attgtaccat tcacgccggt tatgtgacgg
    12361 ggctggtggg gccggatggt gcaggtaaaa ccacgctaat gcggatgctg gcgggattac
    12421 tgaaacccga cagcggcaat gccacgatga ttggctttga tccaatcaaa aacgacggcg
    12481 cgctgcacgc cgtgctcggc tatatgccgc agaaatttgg tctgtatgaa gatctcacgg
    12541 tgatggagaa cctcaatctg tacgcggatt tgcgcagcgt caccggcgag gcacgtaagc
    12601 aaacttttgc tcgcctgctg gagtttacgt ctcttgggcc gtttaccgga cgcctggcgg
    12661 gcaagctctc cggtgggatg aaacaaaaac tcggtctggc ctgtaccctg gtgggcgaac
    12721 cgaaagtgtt gctgctcgat gaacccggcg tcggcgttga ccctatctca cggcgcgaac
    12781 tgtggcagat ggtgcatgag ctggcaagcg aagggatgtt aatcctctgg agtacctcgt
    12841 atctcgacga agccgagcag tgccgtgacg tgttactgat gaatgaaggc gagttgctgt
    12901 atcaggggga accaaaagcc ctgacacaaa ccatggccgg acgcagcttt ctgatgacca
    12961 gtccacacga gggcaaccgc aaactgttgc aacgcgcctt gaaactgcca caggtcagcg
    13021 acggcatgat tcaggggaaa tcggtacgtc tgatcctcaa aaaagaggcc acaccagacg
    13081 atattcgcca tgccgacggg atgccggaaa tcaacatcaa cgaaactacg ccgcgttttg
    13141 aagatgcatt tattgatttg ctgggtggtg ccggaacctc agaatcgccg ctgggtgcaa
    13201 tattgcatac ggtagaaggc acacccggcg agacggtgat cgaagcgaaa gaactgacca
    13261 agaaatttgg tgattttgcc gccaccgatc acgtcaactt tgccgttaaa cgtggggaga
    13321 tttttggttt gctggggcca aacggcgcgg gtaaatcgac cacctttaag atgatgtgcg
    13381 gtttgctggt gccgacttcc ggccaggcgc tggtgctggg gatggatctg aaagagagtt
    13441 ccggtaaagc gcgccagcat ctcggctata tggcgcaaaa attttcgctc tacggcaacc
    13501 tgacggtcga acagaattta cgctttttct ctggtgtgta tggcttacgc ggtcgggcgc
    13561 agaacgaaaa aatctcccgt atgagcgagg catttggcct gaaaagtatc gcctcccacg
    13621 cgaccgatga actgccatta ggttttaaac agcggctggc gctggcctgt tcgctgatgc
    13681 atgaaccgga cattctgttt ctcgacgaac caacgtccgg cgttgatccc ctcacccgcc
    13741 gcgaattttg gctgcatatc aacagcatgg tagagaaagg cgtcacggtg atggtcacca
    13801 ctcactttat ggatgaagca gaatattgcg accgcatcgg cctggtgtac cgtgggaaat
    13861 taattgccag cggcacgccg gatgatttga aagcgcagtc ggccaacgac gagcaacccg
    13921 atcccaccat ggagcaagcc tttattcagt tgatccacga ctgggataag gagcatagca
    13981 atgagtaacc cgatcctgtc ctggcgtcgc gtacgggcgc tgtgcgttaa agagacgcgg
    14041 cagatcgttc gcgatccgag tagctggctg attgcggtag tgatcccgct gctactgctg
    14101 tttatttttg gttacggcat taacctcgac tccagcaagc tgcgggtcgg gattttactg
    14161 gaacagcgta gcgaagcggc gctggatttc acccacacca tgaccggttc gccctacatc
    14221 gacgccacca tcagcgataa ccgtcaggaa ctgatcgcca aaatgcaggc ggggaaaatt
    14281 cgcggtctgg tggttattcc ggtggatttt gcggaacaga tggagcgcgc caacgccacc
    14341 gcaccgattc aggtgatcac cgacggcagt gagccgaata ccgctaactt tgtacagggg
    14401 tatgtcgaag ggatctggca gatctggcaa atgcagcgag cggaggacaa cgggcagact
    14461 tttgaaccgc ttattgatgt acaaacccgc tactggttta acccggcggc gattagccag
    14521 cacttcatta tccccggtgc ggtgaccatt atcatgacgg tcatcggcgc gattctcacc
    14581 tcgctggtgg tggcgcgaga atgggaacgc ggcaccatgg aggctctgct ctctacggag
    14641 attacccgca cggaactgct gctgtgtaag ctgatccctt attactttct cgggatgctg
    14701 gcgatgttgc tgtgtatgct ggtgtcagtg tttattctcg gcgtgccgta tcgcgggtcg
    14761 ctgctgattc tgttttttat ctccagcctg tttttactca gtaccctggg gatggggctg
    14821 ctgatttcca cgattacccg caaccagttc aatgccgctc aggtcgccct gaacgccgct
    14881 tttctgccgt cgattatgct ttccggcttt atttttcaga tcgacagtat gcccgcggtg
    14941 atccgcgcgg tgacgtacat tattcccgct cgttatttcg tcagcaccct gcaaagcctg
    15001 ttcctcgccg ggaatattcc agtggtgctg gtggtaaacg tgctgttttt gatcgcttcg
    15061 gcggtgatgt ttatcggcct gacgtggctg aaaaccaaac gtcggctgga ttagggagaa
    15121 gagcatgttt catcgcttat ggacgttaat ccgcaaagag ttgcagtcgc tgctgcgcga
    15181 accgcaaacc cgcgcgattc tgattttacc tgtgcttatt caggtgattc tgttcccgtt
    15241 cgccgccacg ctggaagtga ctaacgccac catcgccatc tacgatgaag ataacggcga
    15301 gcattcggtg gagctgaccc aacgttttgc ccgcgccagc gcctttactc atgtgctgct
    15361 gctgaaaagc ccacaggaga tccgcccaac catcgacaca caaaaggcgt tactcctggt
    15421 gcgtttcccg gctgacttct cgcgcaaact ggataccttc cagaccgcgc cgttgcagtt
    15481 gatcctcgac gggcgtaact ccaacagtgc gcaaattgcc accaactacc tgcaacagat
    15541 cgtcaaaaat tatcagcagg aactgctgga aggaaaaccg aaacctaaca acagcgagct
    15601 ggtggtacgc aactggtata acccgaatct cgactacaaa tggtttgtgg tgccgtcact
    15661 gatcgccatg atcaccacta tcggcgtaat gatcgtcact tcactttccg tcgcccgcga
    15721 acgtgaacaa ggtacgctcg atcagctact ggtttcgccg ctcaccacct ggcagatctt
    15781 catcggcaaa gccgtaccgg cgttaattgt cgccaccttc caggccacca ttgtgctggc
    15841 gattggtatc tgggcgtatc aaatcccctt cgccggatcg ctggcgctgt tctactttac
    15901 gatggtgatt tacggtttat cgctggtggg attcggtctg ttgatttcat cactctgctc
    15961 gacacaacag caggcgttta tcggcgtgtt tgtctttatg atgcccgcca ttctcctttc
    16021 cggttacgtt tcgccggtgg aaaacatgcc agtatggctg caaaacctga cgtggattaa
    16081 ccctattcgc cactttacgg acattaccaa gcagatttat ttgaaggatg cgagtctgga
    16141 tattgtgtgg aatagtttgt ggccgctact ggtgataacg gccacgacag ggtcagcggc
    16201 gtacgcgatg tttagacgta aggtgatgta acttcttatc tttcgccagc aaagacacta
    16261 ccgccgggcc ggcaaggatt gccagccctg caattgccag caaaaagttg ttttccagta
    16321 cgcgggacaa cagccacagc acaatcagcg ctgcgccaaa ataccaggtc gtggtcagct
    16381 cttccaacac gtctgccacc tcacgccagc gttgctcggg gtggcgctga aacaccaaca
    16441 tcatcactac cgtgacacaa tacagtgcgc ataatcccac gccgacgtga accagagtct
    16501 tactcatcca gcccaccacc agcagcgcca ctaccagtaa atgcaacata atctgccagc
    16561 aacttagacc cgttgcgaca cgaacacgtt gttgccactt catggcttct ctcctgaaga
    16621 atttatctct acttactcag agtaccgaac tttacggaaa attccgtaag accgcacctt
    16681 tttttgacgc cgactacact atttcaatga gataagaggc aaagacagga aaattatgcc
    16741 cgatcaaaca caacaatttt cgttcaaggt gctcaccatc aacattcaaa aaggttttac
    16801 cgcgtttaac cgacgcttca ttttgccgga acttcgcgac gcggtgcgta ccgtcagcgc
    16861 cgatattgtt tgcctgcagg aagtgatggg cgcgcacgaa gttcatccgc tgcatgtgga
    16921 aaactggccc gatacctcgc actacgagtt tctcgccgac actatgtgga gcgattttgc
    16981 ctacggtcgc aatgccgtat acccggaagg gcatcacggc aacgccgtac tgtcgcgtta
    17041 tcccattgaa cattatgaga atcgcgatgt ttcggtcgat ggtgcggaaa agcgcggcgt
    17101 gctctactgc cgcattgtgc cgccgatgac cggaaaagcg attcatgtga tgtgcgtaca
    17161 tctgggcctg cgtgaggcgc accgtcaggc gcagcttgcg atggggtgaa tgagctaccg
    17221 gacggcgaac cggtattggt ggcgggtgat ttcaatgact ggcggcaaaa agctaatcat
    17281 ccgttaaaag tgcaggccgg actggatgag atttttaccc gcgcccacgg acgcccggcg
    17341 cgcacgtttc cggtgcaatt tcctctacta cgactggaca ggatctacgt caaaaatgcc
    17401 agcgccagcg cgccaaccgc gttgccgctg cggacatggc gacacctttc tgatcatgcc
    17461 cctttaagtg cggagattca tttatgaaat gtagctggcg cgaaggcaat aagatccagt
    17521 tgctggaaaa cggcgagcaa tattatcccg cggtgtttaa ggcgattggc gaggcacaag
    17581 aacgcatcat tcttgaaacg tttatctggt ttgaggataa cgtcggcaaa cagctgcatg
    17641 cggcactact ggcagcagcg caacgcgggg ttaaagcgga agtcttgctg gatggctacg
    17701 gttcgccgga tctcagcgat gagtttgtca ataaactgac ggcagctggc gtagtgttcc
    17761 gctactacga tccccgccct cgcctttttg gtatgcgcac caatgtgttt cgccggatgc
    17821 atcgcaaaat tgtggtgatc gacgcgcgta tcgcctttat tggcgggctg aattactccg
    17881 ccgagcatat gtccagctac ggtccagagg ctaaacagga ttacgcggta cgccttgaag
    17941 ggccgattgt cgaagatatt ctccagtttg agctggaaaa cctgcctgga cagagcgcgg
    18001 cacggcgctg gtggcgacgt catcacaaag cggaagagaa ccgccagccg ggagaagcgc
    18061 aggtattgct ggtctggcgc gataacgaag aacatcgcga tgatattgaa cgccattatc
    18121 tgaaaatgct cactcaggcg cggcgggaag tgattatcgc caacgcctac ttcttccccg
    18181 gctatcgatt tttacacgcc ttgcgtaaag cggcacggcg cggggtgcgg atcaaactga
    18241 tcattcaggg cgaaccggat atgccgattg tcagagtcgg tgcgcgcttg ctgtataact
    18301 atctggttaa aggcggcgtt caggtttttg agtaccgccg ccgcccgctc cacggcaaag
    18361 tggcattgat ggacgatcac tgggcgacag tagggtccag taatctcgat ccgctcagtt
    18421 tgtcactgaa tctcgaagca aatgtcatca tccacgatcg tcattttaac cagacgctgc
    18481 gcgataatct gaacggcatt attgccgcag attgtcagca ggtggatgaa accatgctgc
    18541 ccaaacgcac ctggtggaac ctgaccaaaa gcgtgctggc gttccacttt ttacgccact
    18601 tcccggcgct ggttggctgg catccggcac acacaccacg tctgacgcag gttgatcccc
    18661 ccgcacaacc gacaatggaa acgcaggatc gggtagaaac tgaaaacacg ggggtaaaac
    18721 cctgatgagt aaatcacacc cgcgctagcg cttagcaaag aagatcctca cctggctgtt
    18781 ttttatcgcg gtgattgtgt tgctggtggt ctacgccaaa aaagtggact gggaagaggt
    18841 ctggaaggtc atccgcgact acaatcgcgt tgcgctgctt agtgcggtcg ggctggtggt
    18901 cgtcagctat ctgatttacg gctgctatga cctgctcgcc cgcttttact gcggtcacaa
    18961 actggcgaag cgccaggtga tgctggtgtc gtttatctgc tacgccttca acctgacgct
    19021 cagtacctgg gtcggcggca ttggtatgcg ctatcgtttg tactcccgac tagggttacc
    19081 gggcagcact attacgcgga ttttctcgct cagtattacc accaactggc tgggctatat
    19141 tttactggca gggattatct ttaccgcagg cgtggtggtg ttgccggatc actggtatgt
    19201 cgctcaaact acgctgcgta ttctcggcat tggcttactg atgattatcg cggtttattt
    19261 gtggttttgc gctttcgcga agcaccgcca tatgaccatc aaagggcaaa agctggtgct
    19321 gccttcatgg aaattcgccc tcactcagat gctgatttcc agcgttaact ggatggtaat
    19381 gggggcgatt atctggctgt tacttggtca aagcgtgaac tatttctttg tactgggcgt
    19441 gttactggtt agtagtattg ctggcgtcat cgtgcatatt ccggcgggga tcggtgtgct
    19501 ggaagcggtg tttatcgcac tactggctgg ggagcatacc tcgaaaggga gcattatcgc
    19561 cgcgctgctc gcttatcgcg tcctgtatta ctttatcccg ctgctgctgg cgctgatctg
    19621 ttacctgcta ctggaaagcc aggcgaagaa gctacgggcg aaaaatgaag cggcgatgtg
    19681 aaatttagtt aagttcttta gtatctgcat tcacgactaa tgaaaaaaac gcgtatgcct
    19741 ttgccagaca agcgttatag ctatcgcggc aagtatccca aagaagccga taaaatagta
    19801 atagagtgtc aatgcacctg taaaagcgca acgaaccgga ctccacaact tttcactatg
    19861 gcattttcct gccagttcaa ggagcttatt tcgtccatgc gagataatgc ctggccataa
    19921 cacaatcact aagcaactta ttacccaaat gggccgttca ctcattaatg ccgcattcac
    19981 gatgattacc agggccaacc ctgtcaacgt catcataatg ataaaacggt gagaaccagg
    20041 atcaacatta aataataaac cggccagcat actgattaaa aacatcgcgc ccgcagtgct
    20101 gaacacaatg ataatggcat atacaggaac taaacttgca acgacaatcg ccaccaaaga
    20161 gagtaaaaac agatatatta cgcctgcgat gacggcattt atcttgttga tatccttact
    20221 taagccatac atacaaacta ataataaccc tatggcgaca tacattgttg gtgaatcata
    20281 tttggttgcc gtaatttcga gatacttagc tccccaggcc agtcctgcgg ttgccaccaa
    20341 acctaaagcg gtaatgagcc atataccgtt taatatcctg gtctcgtgct gaaaatctaa
    20401 tttattgctg ttttgtgagt atgattccat tcttttagtt gtccttagaa aaaatattaa
    20461 tattcaccat caataaattt aaacccacgc atacaaaata cttttgtatt tatggatacg
    20521 gaaaacgctt ccgctcggcc ataaggcgta ttttatacct ggtacttgtt aagtgtcgtt
    20581 tttagtaaga aaagaaatcc cgacacatgg ccgggatatt gatggtgaaa aagaattaac
    20641 ggcggttgcc aaaaattcgc agcaacatca ggaacaggtt gatgaagtcc agatacaagg
    20701 ttaacgcgcc aagaatggaa tatttgcgca ggttcgacgt gtcgcgggta tcaatctgct
    20761 tacccatatt tttcaatttc tgagtgtcat acgccgtcaa tccgacaaag acaatcacgc
    20821 cgatgtaggt aactgcccac atcaatgctt cgcttttcag ccagaagttg accagcgatg
    20881 ccagcacaat gccgattaac gccataaaca gcatattgcc aaagccactt aaatcgcgct
    20941 tcgtggtgta accgtacagg ctcattgcgc cgaacatccc ggcagtaacg acgaaagtac
    21001 tggcgataga agcagcggta tagacaatga atatactgga aagcgtaaga cccgtcagcg
    21061 ccgaataaag cataaagagc atcgtcgtta cacctgcgct cagcttttga atcatcgctg
    21121 ataacacaat aaccaatgct aattgcgcga tgatcagacc gattaaaaag acacggttag
    21181 tgaacaacag ctccatcacg gccgcggaat tagccgcata ccaggcaaca aatgcggtca
    21241 gcaacaagcc aacggtcatc cagccataga cttgcgccat ataagtttgc aagccagccc
    21301 ggggttgtac gattgaatca gaacgtggga atctgtccat gacgatctcc tgaagatata
    21361 aggaatatct taaggatact gcaaaatgat gaggctgtgc atcgacgcag cgtaaacgca
    21421 tgtactgagc ggtgaaattg ccggacgcag cggtgcctta tccggctaac aaaaaactac
    21481 cagcgttttg ccgcctgctg atcgctctcc cgagcttcaa cccagcggtc gccttccggc
    21541 gtggcttcgc gcttccagaa cggtgcgcgg gttttgagat aatccataat aaactgcccg
    21601 gcttcaaacg cactgctgcg atgcgcactg gtgacaccgg caaaaacgat ttcatcgccc
    21661 ggccataatt ccccgatgcg gtgaatcaca gtgacgcgcc ccagcggcca gcggttacgc
    21721 gcttcatcaa caatttctgc cagtgctttt tcagtcattc ccggatagtg ttcgagggtt
    21781 aatgctttga cgctgtcgcc caggttatgg ttgcgcacct taccagtaaa ggtgactacc
    21841 gcaccgtctt cgtcacgctc cgccagccac gggtactctt ctcctacgct gaacggctgc
    21901 ggaccaacaa caattttggt ttctgccatc ttaacctccg gttaccggcg ggaagaaagc
    21961 tacttcgtcg ccgtcagtca gcggatggtc aaaactcacc agcgtctggt tgacggcagc
    22021 cagtaatttg ccatcttcca gcgccagcgc ccagcgatcg ctctgcgcag ccatgtgctg
    22081 gcgtaacgct tcaacagttg ggaaatccgc agccacttcg gttgcatctg ttcccaccaa
    22141 ctcgcgcacc tgcgcgaaaa aaagaacttt aatcatccgc ttccacctta aagtcacccg
    22201 acttgccgcc gctcttcgcc agcaaacgta ccggaccaat caccatatct ttttgcaccg
    22261 ctttgcacat gtcataaatg gtcagcgccg ccacggaggc cgcggttaat gcttccattt
    22321 cgacaccggt tttcccggtc aggcggcata aggtttctat acgcacccga ttgtgctccg
    22381 gctcggcctg taaattgact tcaactttgc tgagcatcag cggatgacag agcgggatca
    22441 gatcccaggt gcgttttgcc gcctgaatac cggcaatacg cgcagtggca aatacgtcgc
    22501 ctttgtggtg gcgaccatca ataatcatcg ccagcgtctc gctgcgcatg gtgacaaagg
    22561 cttccgcccg cgcttcacgc acggtttccg ctttggcgga gacatccacc atgtgcgctt
    22621 cgccagcggc gttgatatgg gtcagttgcg acatacttat ttcttcaaat gtggatggaa
    22681 attacacgga cgcgtacggg catccagctg cggcgcgatg atattttccc atgcggtacg
    22741 gcacgctttg gtcgaacccg gcatggcgaa aatcagcgtt ttgttggcga cgcccgcaac
    22801 cgcacgagat tgcaacgtgg aagtgccaat ctcttcaaac gacaacatcc ggaacacttc
    22861 accaaaacct tcaacttcac ggtcgaacaa cggcagcaat gcttcgggag cctgatcacc
    22921 ttccgtcagg ccagtaccac ccgtaatcaa taccacttgt acatcgtcgc tggcgatcca
    22981 cgcagatacc tgagcgcgaa tagcgtagcg gttttctttc acaatggctt tatcgacaac
    23041 gtgatggccc gcttcttgcg ccgaatcgcg cagatagtga ccggaggtat cgtcttcttc
    23101 accgcgacga ttagaaaccg taagaatagc aatacgggtc gggataaatt cagtgcttac
    23161 ctgactcatc tgatctctcc ttttgacgtt ttagccgcca atgtacgata agttttgcgt
    23221 aataccggtg ttgttttgat gcaggaaatg ggtctgtttc ttctcccgca gcgccgctga
    23281 aatacgcgct tccagcgcct gttgctgggt atcgtcttcc agcagatcgc gcaggttaac
    23341 gccgccttca ccaaacaggc agagatggag tttaccaatg gaggaaacgc gcaggcggtt
    23401 gcaagtggcg cagaagtctt tttcatacgg catgataagg ccaatctctc cggcgtaatc
    23461 tggatggcaa aagacttgcg cgggaccgtc gctgcgttga cgtaattggt ggatccagcc
    23521 gcgacgcagt agctcgtcac gcagaacctg accagagatg tgatgcttac ggaagagctc
    23581 gctgccctcg cccgtttcca tcagttcgat gaaacgcagc tggatagggc gatgctggat
    23641 ccagttcaga aaggtgtcga gctggtgatg attaacatca cgcatcagca cggtattgac
    23701 tttgaccttc tcaaaaccgg cctcaaatgc agcatcaatc cctgccatga cctggttgaa
    23761 tttatcctgc ccggtaatag cgtgaaactg gcgggcgtcc agactgtcga cactgacgtt
    23821 aatgccagta agtcccgcat cgcgccagtt cgccacatcg cgttccagac ggtaaccatt
    23881 ggtggtgacc gcaatctggc ggatagcgtc gttttcccgc acagcggcga tgatatcggt
    23941 aaagtcgcgg cgtaaagacg gctcacctcc tgtcaggcgc actttttcgg tgcccagact
    24001 ggcgaaggcg cgcgtaaccc ggcgaatttc atcgacggta agaaagcctt tattggtgac
    24061 gccgctcggt ttgtagccat ccggcaggca gtaggtgcaa cgaaagttac acacatcggt
    24121 aatcgacagg cgcaagtagt aaaacttacg cgcaaatgca tcagtcagtt gtgaagccat
    24181 gtacaccttt ccagatacgg gaggcgaagt catttcttcc ttcgccctgg tggcaatctt
    24241 tacgagcatt gtcacggcca aagcaccgta tcagttgacc caggtgcaga ggctagagtg
    24301 tttagtggtt aagccgatac tagcgtgtaa atgagatttt taccatccac actttcgcta
    24361 tgcaatcatg tatatagcgt catgatcgtg ctatttcgct acagaataag ggaaaatggc
    24421 agttttactt tgatatacat catcagggag gcatagcgtg catcgtcctt tagaggtaga
    24481 agaaaatagt ttgtatcctc aatattggca ggttaattgc tgtttccccg caatttgcgc
    24541 tactgtagcg cggataatct gactccagga aactatatgc gcaatcgtac gctggctgat
    24601 cttgatcgtg tcgttgctct cggcggaggg catggactgg gacgcgttct ctcatcactt
    24661 tcgtctttgg gttctcgttt aacgggtatc gtcaccacca cggataatgg tggctcgacg
    24721 gggcgtattc gccgttcaga aggcggcatt gcctggggcg atatgcgcaa ctgcctcaac
    24781 caactgataa cggaaccgag cgtcgcctcc gcgatgtttg aataccgttt tggcggcaat
    24841 ggcgaacttt ccgggcacaa ccttggaaac ttgatgttaa aggcgctgga tcaccttagc
    24901 gtgcggcctc tggaagccat caatttaatt cgtaatctgc tgaaagtgga tacgcatttg
    24961 attccaatgt cagagcatcc cgtcgatctg atggcgattg acgatcaggg gcatgaagtt
    25021 tacggcgagg tcaatatcga ccagttaact acgccgattc aagagttatt attaacgccg
    25081 aatgtacccg caacgcgtga ggcagttcac gctatcaatg aagcggatct catcattatt
    25141 gggcctggca gtttttatac cagcctgatg ccaattctgc tgctgaagga aatcgcccag
    25201 gcattacgcc gcacgccagc gccgatggtt tatatcggca atctggggcg tgagttgagt
    25261 ttacctgcgg ctaatttgaa gctggaaagc aagctggcaa ttatggagca gtatgttggt
    25321 aaaaaagtca ttgatgcggt catcgtcggg ccaaaagtgg atgtctcggc ggtgaaagag
    25381 cggattgtga tccaggaggt actggaggcc agcgatattc cgtatcgtca tgaccgccag
    25441 ttgttacata acgcgctgga aaaggcgtta caggctttag gttaacggaa atccgaagga
    25501 aaattccggc ttcctattga agacaaagtg cgcgttgttt atgccggatg cggcgtgaac
    25561 gccttatccg gcctacaaac cgcgcaaatt caatatattg cggagaaaat gtaggcctga
    25621 taagcgtagc gcatcaggct gttttccgtt tgtcatcagt cttcttcgct atcctgttac
    25681 gatgcggcaa taaacaactc acgcaactga tgcaactggt cacgaatttg tgccgcttct
    25741 tcgaactcca gattctgcgc gtgttgcatc atcagccctt ccagttcatg gattttctgc
    25801 tgcaacgctt tcggcgacat atccatcggc acattatccg gctcaacaat cgggcgcgat
    25861 tttcctctgc ccttcgcttt ggttttggca atgttctgcc ccagcgccag gatatcgacc
    25921 actttcttgt tcaagccttg cggcgtaatg ccgtgttcct cgttgtactt ctgctgtttc
    25981 tcacggcgac gttcggtttc gccaatcgct ttcgccattg atggggtgat cttatcgccg
    26041 tagagaatcg ctttaccgtt aacgttacgt gccgcacgac caatggtctg gatcaacgaa
    26101 cgttcggaac gcaggaagcc ttctttgtca gcgtcgagga tcgccaccag cgacacttcc
    26161 ggcatatcca gaccttcgcg cagtaagttg atccctacca gcacgtcgaa ctcacccaga
    26221 cgcaagtcgc ggataatctc catacgttcg acggtgtcga tatctgagtg aagataacgc
    26281 acgcgctcgc catgttcttc gagatattcg gtaagatctt ccgccatccg cttggtcagt
    26341 gtggtgacca gtacgcgttc gttaattgcc gctcgctgac gaatctccga aagaagatca
    26401 tcaacctgtg tcgccaccgg ccgcacttcg ataatcgggt caagcaatcc ggttggacgc
    26461 accacctgat ccaccacatc gccgccggat ttttccagct cgtaattacc cggcgtcgcc
    26521 gaaacataga tggtttgcgg cgctaatgct tcgaactctt caaacttaag cggacggtta
    26581 tccagcgctg atggcaggcg gaagccgtac tccaccagtg tctctttacg cgcccggtca
    26641 ccgcgataca tgccgccaat ttgtggaatg gtgacgtgag attcatcgac gaccagcagc
    26701 ccatcggcag gcaggtaatc aaacagcgtc ggcggtggct cacccggtcc acgaccggag
    26761 aggaagcgcg agtagttttc aatccccgaa cagtagccca gctcgttcat catctccaga
    26821 tcaaactggg tacgctgggt cagccgctgc tcttccagca gtttgttgtt ttccaacagc
    26881 actttgcgtc tggcggccag ttcttctttg atctcctcca tcgcctgtac gatgcgctcg
    26941 cgcggtgtga cgtagtgcgt tttcgggtag atggtaaaac gtggaatagt ggaaacaatc
    27001 tgcccggtca gcgggtcaaa taacgacaat cgttccactt cctcgtcaaa cagttccacg
    27061 cgaagtgcaa tgtcatccga ttctgccggg aagatatcaa tcacctcgcc acgaacgcgg
    27121 aaagtaccac gctggaatgc ttgatcatta cgagcgtatt gcagctccgc cagtcggcgc
    27181 agaatcgcgc gctgatcgat aatcataccg accgtgagat ggagcatcat cttgagatat
    27241 aaatcaggat cgcccagacc ataaatcgcg gaaacagagg ccactacaac cacatcacgc
    27301 cgctccagca tcgctttggt ggcggataaa cgcatctgct caatatgttc gttaaccgag
    27361 gcatctttct caatgaaagt gtcggaactc ggtacatagg cttccggctg atagtagtcg
    27421 tagtaggaga cgaaatactc caccgcgttt tccgggaaga actctttcat ttcgccatac
    27481 agctgggccg ccagcgtttt gttgggcgca agtaccatgg ttgggcgctg aaggtcagca
    27541 atgacattgg caatggtgaa ggttttccct gagccagtca cgccaagtaa cgtctggtgc
    27601 gccaggccat cttccagccc ctcttcgaga cgtcgaatcg cctctggctg atcgccagaa
    27661 ggtttaaaag cggaattcag tttgaacggt ttactcatga gtcgctacct gaaggagttg
    27721 ggcgggcagg tatgtaattt tactcgtcgt acttaattat gccaacaaat tatactggat
    27781 aaaaaaacag ttcatcacca taatatttct gatacagcgt aaactccgct gtcaatcatg
    27841 agcaaaattt actctgtggc gagataaaac tccggcctta ccgggttatc cccaaagcaa
    27901 cggctttttt aacatttgtc aagatgagtg atgacagttt tatggcaaga gatgcctgtt
    27961 cagtgactgc cattgcattt atctaaccag ttaaaaaata aaagatattt ctttgagccg
    28021 tctttaacgc caattcgcgt gcaagccgcg tattctctcg cttgcctcgt gttttctaac
    28081 tctaatacac atggttatcc acaggaatag tggataactg tctccagccc ctatcccccg
    28141 ccgcctgggc aattcccaca ttcgccgcat gaggcggaag taaaattttt ttcgtgatta
    28201 ttttagaatt taattggtta aattgcagtc aatcgaagac gcgatctcgc tcgcaattta
    28261 accaaataca gaatggctac aacaaggcaa ggtttatgta ctttccggtt gccgcatttt
    28321 ctggattttc tgcaagccag gggatctctc ccagcagcgg cgcgggaatc atgcgggtga
    28381 gcgtggtcat atattcagcg tgacgttttc ccggaggcgt aacatcgttc gccacccaac
    28441 ccgccagagt cagtccggcg tgttgtattg cctgcgcagt caacatcgcg tgattaatac
    28501 agccgagttt cacaccaact accagtatca ccggcagttg ttcctgtgtt acccaatctg
    28561 caaaagtgaa agtgtcagaa agcggcgtaa accagccgcc agcaccttcc actaacaccc
    28621 agtcagcctg ttgttcaagc gcgcgtaatc cggcgctcat taccaatgat tctatcggcc
    28681 tgccctcttg cgcgctgatg atgtgcggcg aagtgggttc tgcgaaggtg taaggattta
    28741 ctgttgcgta atccagctgc aggctgctgt tgtgctgtaa cgccagcgcg tcactattac
    28801 gtaagccttc cggggtcttt tcgctgccag aggcgaccgg tttataacct gccgtccgat
    28861 aacctactgc cttcgcggct tgtaaaagtg cacaactggc gacggttttc cccacttcgg
    28921 tatccgttcc ggtgacaaaa taacgtttac tcacgagcaa tcactcccaa aaaaagatga
    28981 tacgtcagag gatatcgccc ctgttgttgc ggccaggcca gttgcaatcg ctgcaattgc
    29041 gaacgcgtta atattcgcgg gtcgcgccct tcatgaagat gcgtagcacc gatgcctttc
    29101 agcgaacgca tggcactgag cgcatcatca aaccatagtg tgatgggctg aatatgatgt
    29161 tgataatgca cgccgttcag cgactgttcg atttcatctg gcggtaaaaa gcgattagca
    29221 tgcggacgct cgtccaccgc ctgccacgcc tgatgcagtt cgggtaacga tccctgcacc
    29281 agcgtggtaa acgccaccac gcctccgggg cgcaccaccc gatacagctc gcggagtgcc
    29341 gtggataaat taccgcacca ctgcaccgcg agattgctcc atgcaagatc gaacgtcgca
    29401 gtcgctaacg gcagggattc gatatctccc gccagataat ggtctgcagc atctttctgg
    29461 cgggcttgca caagcattgg cggtgagaga tctaacgccg tcacctgtgc gtgacgctct
    29521 cgccagtggc ggctcatcca gcctggccca caccccgcgt ccagtacgtg ggtgtattta
    29581 cgctgtggga gcattgccag taagacgtca gcactccggc gctgtaactc tgcgtgttgc
    29641 tcatagtgcg cggctgcccg accaaatgcc gctgcaatgg cttgtttatt aaccgttgcc
    29701 atgcagcacc tccagcagac ggtcgatatc ctgcatttca tgcgctgcgg ttagcgttaa
    29761 gcgcagtcgc gcagtaccag cgggtacggt tggcgggcga atcgccgtga cccagcagcc
    29821 ttgctggcgc agtttttctg ccagttgtaa cgcacggctg ttatcaccga cgatcaatgg
    29881 ctggatggcg ctgcatgaat cagcaagcgt aaacggcaaa tcctgtactc cggcacgaaa
    29941 acgcgcaatg agtgacacca gtttttcgcg ccgtgcatcc ccctcatcac ggcgaatgac
    30001 cgccagcgac gcacgtaatg cctgcgcctg agcgggcggc atactggtgt tgtagataag
    30061 gtggcgggcg aattgcagca gataatccgc caccgtactg gagcaaagca ccgctgcccc
    30121 gctgacgcca aatcctttgc caaaagtcac caccagcaat tctggtttta ccttttgcag
    30181 ccagcagctg ccgcgcccct gctccccgat aacgcccgtg ccgtgggcat catcgaccat
    30241 caaccagcca ttgtgctgtt gcgttacctg ctggatttcc gccagtggcg cactatcgcc
    30301 gtccatgctg aacacgcctt ctgtcaccac cagttgctgc cccggacagg gggaagcaag
    30361 cagtcgcgcc agatgagtga catcgttatg aacaaaacgg cgaagctgcg acgggcttaa
    30421 actggcagcc tccagcaatg aggcatggct aagccggtca gcgacaatgc ggtcctcttt
    30481 tgccatcatc gcggcaatga ccgcctgatt agcggcaaaa ccagagataa atagcagtgc
    30541 ccgcgaatag cccagccact cggccagttc ttcttccagc gcctgatgcg caacgctata
    30601 accgctgacg tgaccggaac cgccgctacc gacgccaaat tgctccgcac cctgctgcca
    30661 ggcacggata atttgcggat gatggcttaa acctaaataa tcgttactgg aaaagttcag
    30721 atactggcga tcatccgcca ccagccagcg tccggctcct tgcgccactg gataacggcg
    30781 acgcagggca tcggcagcac gccgcgcatc gagcgccgcg ttgattttct cctgccagct
    30841 catagtgctg ccgcgttgta atattcgtca gtatccgggg tcatcagcgc ctgttcaaga
    30901 cgttgctgtt gttcgttatc ccctgccagc acggcagttt gctgcggatt tagccccagt
    30961 ttgcggaaca gttgcaggtc tttatcttct tccggattcg gcgtggtcag cagtttgcaa
    31021 ccgtagaaaa tcgagtttgc gcctgccata aagcacatcg cctgagtctg ttcgttcatc
    31081 tgctcgcgtc cggcagaaag gcgcacgtaa gaggtcggca tcatgatccg cgcgaccgca
    31141 atggtgcgaa taaaatcaaa ggcatcaacg tcatcgttat cggcaagcgg cgtgcctttc
    31201 accttcacca gcatgttgat tggcacgctt tccggcggcg tcggcaggtt tgccagttgc
    31261 agcaataatc cggcgcgatc ttttaccgtt tcgcctaagc ccacaatgcc gccagaacag
    31321 actttgatcc cggcatcgcg cactttttcc agcgtatcga ggcgttcctg ataagtgcgg
    31381 gtggtgatga tattgccgta aaactccggc gaggtgtcga ggttgtggtt gtagtaatcc
    31441 agcccggcgt tcgcgaggcg ctgcgcctga gattcactca acgtgcccag cgtcatacac
    31501 gcctccagcc ctaaatcttt taccccctgc accatctgct ccaggtacgg catatcgcgt
    31561 tcgttgggat tcttccacgc cgcgcccatg caaaaacgcg tcgatcccgc cgctttcgct
    31621 ttgcgcgccg actccagcac ctgttcaact tccatcaacc gctcggcttc cagaccggtt
    31681 ttatagcgcg agctttgcgg gcaatatttg caatcttccg ggcaagcacc ggttttaatc
    31741 gacagcaacg tgctgacctg cacctgacga ggatcgaaat gctggcgatg cacctgctgc
    31801 gcttcaaaca gcagatccag caacggtttt tcaaataatt ctgcgacttg cgacaatgtc
    31861 cagcgtgggc ggtgagccat ggggcttctc caaaacgtgt tttttgttgt taattcggtg
    31921 tagacttgta aacctaaatc ttttcaattt ggtttacaag tcgattatga caaaggacga
    31981 tcttgccttt gaccaacgcc atatctggca cccatacaca tccatgacct ccccgctgcc
    32041 ggtttatccg gtggtgagcg ccgaaggttg cgagctgatt ttgtctgacg gcagacgcct
    32101 gattgacggt atgtcgtcct ggtgggcggc gatccacggc tacaatcacc cgcagcttaa
    32161 tgcggcgatg aagtcgcaaa ttgatgccat gtcgcatgtg atgtttggcg gtatcaccca
    32221 tgcgccagcc attgagctgt gccgcaaact ggtggcgatg acgccgcaac cactggaatg
    32281 cgtttttctc gcggactccg gttccgtagc ggtggaagtg gcgatgaaaa tggcgttgca
    32341 gtactggcaa gccaaaggcg aagtgcgcca gcgttttctg accttccgca atggttatca
    32401 tggcgatacc tttggcgcga tgtcggtgtg cgatccggac aactcaatgc acaacctgtg
    32461 gaaaggctat ctgccagaaa acctgtttgc tcccgccccg caaagccgca tggatggtga
    32521 atgggatgaa cgcgatatgg ttggctttgc ccgcctgatg gcggcgcatc gtcatgaaat
    32581 cgcggcggtg atcattgaac cgattgtcca gggcgcaggc gggatgcgca tgtaccatcc
    32641 ggaatggtta aaacgaatcc gcaaaatgtg cgatcgcgaa ggtatcttgc tgattgccga
    32701 cgagatcgcc accggatttg gtcgtaccgg caaactgttt gcctgtgaat atgcagaaat
    32761 cgcgccggac attttgtgcc tcggtaaagc cttaaccggc ggcacaatga ccctttccgc
    32821 cacactcacc acgcgcgagg ttgcagaaac catcagtaac ggcgaagccg gctgctttat
    32881 gcacgggcca acttttatgg gcaatccgct ggcctgcgcg gctgcaaacg ccagcctggc
    32941 gattctcgaa tctggcgact ggcagcaaca ggtggcggct attgaagtac agctgcgcga
    33001 gcaacttgcc cccgcccgtg atgccgaaat ggttgccgat gtgcgcgtgc tgggggcaat
    33061 cggcgtagtc gaaacaactc gtccggtgaa tatggcggcg ctgcaaaaat tctttgtcga
    33121 acagggggta tggatccggc cttttggcaa actgatttac ctgatgccgc cctatattat
    33181 tctcccgcaa cagttgcagc gtctgaccgc agcggttaac cgtgcggtgc aggatgaaac
    33241 atttttttgc caataacggg aagtcagcgt gtgggtttct ggctacactt tctgcaaact
    33301 agaaaggagg gttcatgaaa ctcatcagta atgatctgcg cgatggcgat aagctgccgc
    33361 atcgtcatgt ctttaacggc atgggttacg atggcgataa tatttcaccg catctggcgt
    33421 gggatgatgt tcctgcggga acgaaaagtt ttgttgtcac ctgctacgac ccggatgcgc
    33481 caaccggctc cggctggtgg cactgggtag ttgttaattt acccgctgat acccgcgtat
    33541 taccgcaagg gtttggctct ggtctggtag caatgccaga cggcgttttg cagacgcgta
    33601 ccgattttgg taaaaccgga tacgatggcg cagcgccgcc gaaaggcgaa acccatcgct
    33661 acatttttac cgttcacgcg ctggatgtag agcatattga tgtcgatgaa ggagccagcg
    33721 gcgcgatggt cgggtttaac gttcatttcc actctctggc aagcgcatcg attaccgcga
    33781 tgtttagtta atcactctgc cagatggcgc aatgctatct ggtatcactt aaaggtatta
    33841 aaaacaactt tttgtctttt taccttcccg tttcgctcaa gttagtataa aaaagcaggc
    33901 ttcaacggat tcatttttct atttcatagc ccggagcaac ctgtgaacac attttcagtt
    33961 tcccgtctgg cgctggcatt ggcttttagc gtgacgctga ccgcctgtag ctcaacacca
    34021 cccgatcaac gtccttctga tcaaactgcg cctggtacct cttctcgccc gattctgtcg
    34081 gcaaaagaag cgcagaattt cgatgctcaa cactattttg catccctgac accaggtgct
    34141 gcagcgtgga atccttcccc gattaccctg cctgcgcaac ctgactttgt tgtcggcccg
    34201 gcgggcactc aaggtgtaac gcataccacg attcaggcgg cggtagatgc ggcaattatc
    34261 aagcgtacca acaagcgcca gtatattgcc gtgatgcctg gtgagtatca gggaacggtg
    34321 tatgtccctg ctgctccggg tggaattact ctgtacggta caggtgaaaa accgattgat
    34381 gtgaagattg ggctttccct tgatgggggc atgagccctg ccgactggcg tcacgacgtc
    34441 aacccgcgcg gcaaatatat gccaggtaaa ccagcgtggt atatgtacga tagctgccag
    34501 agcaaacgca gcgacagtat cggtgttctc tgctctgcgg tcttctggtc acaaaacaat
    34561 ggcctgcaac tgcaaaacct gaccatcgaa aacacgctgg gcgatagcgt agatgcaggt
    34621 aaccatccgg cggtggcact gcgtactgat ggtgaccagg tacagattaa caacgttaac
    34681 attctcggtt gtcagaacac cttctttgtc accaacagcg gtgtgcagaa ccgtctggaa
    34741 acgaatcgtc agccgcgtac gctggtgacc aacagctaca ttgaagggga tgtggatatc
    34801 gtttctggtc gcggcgcagt ggtgttcgat aacaccgaat tccgcgtggt gaactcacgt
    34861 actcagcaag aagcgtatgt gtttgcaccg gctacgctgt ccaacattta ctacggtttc
    34921 ctcgccgtaa acagccgttt caatgctttc ggtgatggtg tggcgcaact gggccgctcg
    34981 ctggatgttg atgccaatac caacggtcag gtggtgatcc gtgatagcgc catcaacgaa
    35041 ggttttaaca cggctaaacc gtgggccgat gcggtgatct ctaatcgtcc gtttgcgggt
    35101 aataccggca gcgtagatga taacgacgaa atacagcgca atctgaatga cactaactac
    35161 aaccgcatgt gggaatacaa taaccgcggc gtgggtagta aagtggttgc agaggcgaag
    35221 aagtaagagc aattaactat ttgccggatg cggcgtaaac gccttatccg gcctacggtt
    35281 cgatgcgatt tgtaggtcgg ataagatgcg caagcatcgc atccgacaat aagtgccgaa
    35341 tgcgacctac attcacatgg cgctttttac atctgacggt ttttattgaa gttaatcaaa
    35401 ctacccgcct tgataatctc gcgctcttca gcagtcagac tttccatata gagcgtaatt
    35461 tccgttaccg gcgcatcttc atggatcaca taacctttaa acgtcgtacc cggattatcc
    35521 agcgccgctt taatgccagg gatgtaaatg taatccccca cttcaaaggt tggcacttcc
    35581 gccatctgca gcggtaacat cccccagttg atgacgttag aacggtagcg tttagtcgcg
    35641 tactcttcgg caatattcgc cagaccgcca atcacacgct ggcagctcgc cgcctgttca
    35701 cgcgcagaac catcgcctgg tttcaccgca tataccatgc tgccaatttc agtttgcagc
    35761 ggatcaatat gctcctgacc agcaatctgc ttaatgcgcg caaacacctc tgtcagctcg
    35821 ctgacattcc ccgccagacg ctgattttcc agctcagccg tcgctttact tctgccaaca
    35881 taaccgggat cgcggcgtga cagggtaaac tccgccagac caatcggatt tgaacgataa
    35941 gaagaggttt caccggaagg aatcagttcg tcggtggtgg tcacttcgtc gaggatcttc
    36001 gagcacactt tcaggacgat attgtcagtc agcgcaccca attccggcca gtctttaatg
    36061 ttcggtccgt aaatcagcgg ttgctgagtt gcccctttca caaagccctg ataaacacgg
    36121 tttttatacg gcgttacatc gaaggcgtac tccggcacgt tgtcccagca atcaagttcg
    36181 ctggcagagg ttaaatagcc accgtttgcc gcagtcgcag cgatagaacg agcgtccatc
    36241 aacgccaccg ctgacatctg cccattagct ggcttagagc cttcgcggtt cgggaagtta
    36301 cgcgtggtgt ggcgaatact taatccgttg ttgattggcg tatcgcccgc gccaaagcat
    36361 gggccgcaga acgcggttct gatgattgcg cctgcgccaa tcaaatctgc taccacacct
    36421 tttttggcta aatccataaa caccggctgt gatgacgggt aaaccgccag cgagaaggtg
    36481 tcattgccac aggattgacc gcgcagtgca ttcgccgccg cgatgacgtt ttcgtagtta
    36541 ccgccagaac agcccgcgat aatcccctgc tgcactttca ggcgaccatt ttccacttta
    36601 tccagcagcg agagtttggc tttaccgtgc gccacgcgtt cggactcaat ttcaatctca
    36661 cgcagaatgt cggtcaggtt ctggttcagt gtgtcgattt catacacgtt gctcgggtgg
    36721 aacggcagcg caatcattgg tttgatggcg cttaaatcaa cgctgatgca gccatcgtag
    36781 tacgccatcg gttgagggtt aagctggcag taatcctggc cgcgaccgtg cagcgccagc
    36841 cagttatgca cttcttcatc agtttgccag acggagctta aacaggtggt ttccgtggtc
    36901 atcacgtcaa cgctgttacg gaaatcggta gagagcgcgc taacgcccgg tccaacgaac
    36961 tccatgactt tgtttttgac gtaaccgttt ttgaacaccg cgccaatgat agccagcgcc
    37021 acatcctgtg gccccacata cggcgcaggt tttccggtca gatgcaccgc aaccacgccc
    37081 ggatagtcga tatcccaggt gtcattaagc agctgtttta ccaactcacc gccgccctca
    37141 ccgactgcca ttgtccctaa tgcaccgtaa cgggtgtggc tgtctgaccc gaggatcatt
    37201 ttgcccccgc ctgccatcat ctcacgcata tattgatgga tgatcgcaat atgcggaggc
    37261 acaaaaatac cgccataacg ctgagctgcc gataaaccaa aaacatggtc atcaccgtta
    37321 atggtgccgc cgacggcgca gagtgagtta tggcagttgg tcagcacata cggcagcggg
    37381 aaacgttcca ttccggacgc tttagcggtc tgtacaatac caacaaaggt aatatcgtga
    37441 gaggctaatg aatcaaactt aattttaagt ttatccatat ttccggacgt attatgagaa
    37501 gagagaatag accaggcaat agtgcctttt ttggcttctt cttttttaat ttcgccggtg
    37561 aaatgttctt cggcaattat ttcgttatta ctggcgagaa acacgccttt
//
LOCUS       DADMIB010000019        36824 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.019, whole genome shotgun sequence.
ACCESSION   DADMIB010000019 DADMIB010000000
VERSION     DADMIB010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36824)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36824)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36824
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.019"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            582..668
                     /gene="leuL"
                     /locus_tag="JNZ89_000956"
     CDS             582..668
                     /gene="leuL"
                     /locus_tag="JNZ89_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leu operon leader peptide"
                     /protein_id="HAY8934901.1"
                     /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH"
     gene            761..2332
                     /gene="leuA"
                     /locus_tag="JNZ89_000957"
     CDS             761..2332
                     /gene="leuA"
                     /locus_tag="JNZ89_000957"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HAY8934902.1"
                     /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME
                     VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT
                     SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN
                     AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV
                     HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI
                     CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
                     AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR
                     LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNVELVKYS
                     LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
                     LQRKAQHNENNKETV"
     gene            2332..3423
                     /gene="leuB"
                     /locus_tag="JNZ89_000958"
     CDS             2332..3423
                     /gene="leuB"
                     /locus_tag="JNZ89_000958"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HAY8934903.1"
                     /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYD
                     VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF
                     KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
                     AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD
                     VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG
                     FGLYEPAGGSAPDITGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGI
                     RTGDLARGAAAVSTDEMGDIIARYVAEGV"
     gene            3426..4826
                     /gene="leuC"
                     /locus_tag="JNZ89_000959"
     CDS             3426..4826
                     /gene="leuC"
                     /locus_tag="JNZ89_000959"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HAY8934904.1"
                     /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL
                     RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH
                     PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
                     GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT
                     LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV
                     VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL
                     TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGQVKAQAEAEGLD
                     KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
                     AAAAVTGHFADIRNIK"
     gene            4837..5442
                     /gene="leuD"
                     /locus_tag="JNZ89_000960"
     CDS             4837..5442
                     /gene="leuD"
                     /locus_tag="JNZ89_000960"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HAY8934905.1"
                     /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
                     NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
                     APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY
                     RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN"
     gene            complement(5491..6573)
                     /locus_tag="JNZ89_000961"
     CDS             complement(5491..6573)
                     /locus_tag="JNZ89_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8934906.1"
                     /translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV
                     GAQPFWIGLFYTVNTIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNAPLFAFNRH
                     YLTLITCGVLLASLANTAMPQLFALAREYEDNSAREVVMFSIAAGIFTLSLVLIAFML
                     PSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPD
                     KLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMALM
                     TLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSW
                     GHFAVYWVIAVISVVALFLTAKVKDV"
     gene            complement(6674..6805)
                     /gene="sgrT"
                     /locus_tag="JNZ89_000962"
     CDS             complement(6674..6805)
                     /gene="sgrT"
                     /locus_tag="JNZ89_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake inhibitor SgrT"
                     /protein_id="HAY8934907.1"
                     /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES"
     gene            6894..8549
                     /locus_tag="JNZ89_000963"
     CDS             6894..8549
                     /locus_tag="JNZ89_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SgrR"
                     /protein_id="HAY8934908.1"
                     /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL
                     NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT
                     VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSTLRRSETHIARQIFSSLTRINEE
                     NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA
                     DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN
                     TTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG
                     CYYLLFDSRTHRGANQQVRDWVNYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART
                     IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIES
                     DIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA
                     SKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
     regulatory      8583..8682
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            8713..9696
                     /gene="thiB"
                     /locus_tag="JNZ89_000964"
     CDS             8713..9696
                     /gene="thiB"
                     /locus_tag="JNZ89_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HAY8934909.1"
                     /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF
                     EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA
                     ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT
                     STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
                     PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP
                     TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISGWQRAVSR"
     gene            9672..11282
                     /gene="thiP"
                     /locus_tag="JNZ89_000965"
     CDS             9672..11282
                     /gene="thiP"
                     /locus_tag="JNZ89_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease ThiP"
                     /protein_id="HAY8934910.1"
                     /translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV
                     AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
                     PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ
                     ALENIPDEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
                     GGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQ
                     GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS
                     LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL
                     LLNNTIGLQQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL
                     KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA
                     VTALILLLLCFLLFTVIEKLPGRNVKTD"
     gene            11266..11964
                     /gene="thiQ"
                     /locus_tag="JNZ89_000966"
     CDS             11266..11964
                     /gene="thiQ"
                     /locus_tag="JNZ89_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706019.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein
                     ThiQ"
                     /protein_id="HAY8934911.1"
                     /translation="MLKLTDITWLYQHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL
                     IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL
                     NAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL
                     DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELL
                     SGKASASAILGITG"
     gene            complement(12077..12841)
                     /locus_tag="JNZ89_000967"
     CDS             complement(12077..12841)
                     /locus_tag="JNZ89_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8934912.1"
                     /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG
                     LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE
                     HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI
                     LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL
                     WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV"
     gene            complement(12927..13805)
                     /gene="araC"
                     /locus_tag="JNZ89_000968"
     CDS             complement(12927..13805)
                     /gene="araC"
                     /locus_tag="JNZ89_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HAY8934913.1"
                     /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
                     YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA
                     YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL
                     LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ
                     LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
                     RAGCEEKVNDVAVKLS"
     gene            14144..15844
                     /gene="araB"
                     /locus_tag="JNZ89_000969"
     CDS             14144..15844
                     /gene="araB"
                     /locus_tag="JNZ89_000969"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HAY8934914.1"
                     /translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD
                     APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL
                     ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
                     LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
                     PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH
                     MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG
                     QSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP
                     VVLDWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI
                     AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
                     SAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
                     "
     gene            15855..17357
                     /gene="araA"
                     /locus_tag="JNZ89_000970"
     CDS             15855..17357
                     /gene="araA"
                     /locus_tag="JNZ89_000970"
                     /EC_number="5.3.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HAY8934915.1"
                     /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL
                     PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ
                     FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI
                     GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV
                     NSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFT
                     TTFEDLHGLKQLPGLAVQHLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED
                     YTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI
                     VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH
                     TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR"
     gene            17557..18252
                     /gene="araD"
                     /locus_tag="JNZ89_000971"
     CDS             17557..18252
                     /gene="araD"
                     /locus_tag="JNZ89_000971"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HAY8934916.1"
                     /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS
                     GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT
                     IWAQSGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA
                     AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMEIFCRQLAPQLPDMQQTLLDKH
                     YLRKHGAKAYYGQ"
     gene            18327..20678
                     /gene="polB"
                     /locus_tag="JNZ89_000972"
     CDS             18327..20678
                     /gene="polB"
                     /locus_tag="JNZ89_000972"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II"
                     /protein_id="HAY8934917.1"
                     /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF
                     IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT
                     VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT
                     RHGELYCIGLEGCGQRIVYMLGSENGDASSLDFELEYVASRPQLLEKLNAWFANYDPD
                     VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID
                     GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK
                     DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
                     EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
                     TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
                     RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG
                     RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG
                     DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL
                     VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL
                     DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF"
     gene            20842..23748
                     /gene="rapA"
                     /locus_tag="JNZ89_000973"
     CDS             20842..23748
                     /gene="rapA"
                     /locus_tag="JNZ89_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HAY8934918.1"
                     /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA
                     RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL
                     DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN
                     IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
                     MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL
                     LVVDEAHHLVWSEDAPSREYQAIEQLAEHMPGVLLLTATPEQLGMESHFARLRLLDPN
                     RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD
                     SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
                     SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV
                     ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
                     SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
                     YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE
                     QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLLDIIGINQDDRGDNMIVL
                     TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS
                     STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
                     EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL
                     SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ"
     gene            23760..24419
                     /gene="rluA"
                     /locus_tag="JNZ89_000974"
     CDS             23760..24419
                     /gene="rluA"
                     /locus_tag="JNZ89_000974"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HAY8934919.1"
                     /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD
                     SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG
                     HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR
                     SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD
                     F"
     gene            complement(24536..25351)
                     /gene="djlA"
                     /locus_tag="JNZ89_000975"
     CDS             complement(24536..25351)
                     /gene="djlA"
                     /locus_tag="JNZ89_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HAY8934920.1"
                     /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF
                     ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR
                     VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE
                     LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA
                     TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK"
     gene            25606..27960
                     /gene="lptD"
                     /locus_tag="JNZ89_000976"
     CDS             25606..27960
                     /gene="lptD"
                     /locus_tag="JNZ89_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HAY8934921.1"
                     /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ
                     GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR
                     TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
                     RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
                     PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
                     RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKV
                     SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP
                     QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE
                     AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL
                     EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI
                     YDDAAVEHFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG
                     GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI
                     SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD
                     NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL"
     gene            28013..29299
                     /gene="surA"
                     /locus_tag="JNZ89_000977"
     CDS             28013..29299
                     /gene="surA"
                     /locus_tag="JNZ89_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SurA"
                     /protein_id="HAY8934922.1"
                     /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
                     LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN
                     IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL
                     AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA
                     HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE
                     SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS
                     ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA
                     QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN"
     gene            29299..30288
                     /gene="pdxA"
                     /locus_tag="JNZ89_000978"
     CDS             29299..30288
                     /gene="pdxA"
                     /locus_tag="JNZ89_000978"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HAY8934923.1"
                     /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT
                     DRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAIENGHYVVETLA
                     RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV
                     ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM
                     GTEEIDTIIPVLDELRAQGMILNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ
                     GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ"
     gene            30285..31106
                     /gene="rsmA"
                     /locus_tag="JNZ89_000979"
     CDS             30285..31106
                     /gene="rsmA"
                     /locus_tag="JNZ89_000979"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HAY8934924.1"
                     /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI
                     GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE
                     KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
                     SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF
                     NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES"
     gene            31109..31486
                     /gene="apaG"
                     /locus_tag="JNZ89_000980"
     CDS             31109..31486
                     /gene="apaG"
                     /locus_tag="JNZ89_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HAY8934925.1"
                     /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ
                     LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI
                     DENGVPFSIDIPVFRLAVPTLIH"
     gene            31493..32335
                     /gene="apaH"
                     /locus_tag="JNZ89_000981"
     CDS             31493..32335
                     /gene="apaH"
                     /locus_tag="JNZ89_000981"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase
                     (symmetrical)"
                     /protein_id="HAY8934926.1"
                     /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG
                     SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
                     RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
                     NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA
                     EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGE
                     AAAS"
     gene            complement(32413..32892)
                     /gene="folA"
                     /locus_tag="JNZ89_000982"
     CDS             complement(32413..32892)
                     /gene="folA"
                     /locus_tag="JNZ89_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HAY8934927.1"
                     /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR
                     HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ
                     FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
     gene            complement(33084..34946)
                     /gene="kefC"
                     /locus_tag="JNZ89_000983"
     CDS             complement(33084..34946)
                     /gene="kefC"
                     /locus_tag="JNZ89_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefC"
                     /protein_id="HAY8934928.1"
                     /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
                     GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG
                     LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI
                     PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV
                     FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
                     FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ
                     GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA
                     DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
                     TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ
                     AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK
                     ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS"
     gene            complement(34939..35469)
                     /gene="kefF"
                     /locus_tag="JNZ89_000984"
     CDS             complement(34939..35469)
                     /gene="kefF"
                     /locus_tag="JNZ89_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HAY8934929.1"
                     /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI
                     DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVLSHGWAYGHGGKALHGKHLLW
                     AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA
                     RHYKQRLLEWQEAHHG"
     gene            complement(35551..>36824)
                     /locus_tag="JNZ89_000985"
     CDS             complement(35551..>36824)
                     /locus_tag="JNZ89_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005116114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8934930.1"
                     /translation="DGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLF
                     GYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMI
                     TEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIG
                     RFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLF
                     VAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNT
                     AGRRPLLIGSFAMMTLELAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELF
                     PTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFA
                     PETSRDVIGANQQYDDPRAENGVNCSDFSLF"
BASE COUNT         8958 a        10084 c         9687 g         8095 t
ORIGIN      
        1 tgcatataaa ataagaaaaa gcaaaatgag taaaattcgg aaaacataaa gatacgggtt
       61 ctgataaaaa cagaatccat tgccgtggaa tgagtcattt accacagcat aataatccat
      121 aatgtttttg ttgcgaaaac aatctaatca taactaccgc gaatactcaa tcatctacaa
      181 aatggattaa atgtgcttat ttaataatta atttatatat ttaatgcatt aattattaac
      241 attaatggat caataatatt caccatatca atatcaaaaa aaattcgcaa aacatataat
      301 tcaatacaaa tcatcaggat aggttttgca acgcgtgcat tttgtcccct ttttcctcgt
      361 tgattagatg caaaaattta ttctgaaata tgtcaaccta tgaaaagtgt cggtcgttaa
      421 acagaaatta atatcgcttg ctttaaccac cgcagcacaa ttagctaatt ttacggatgc
      481 agaactcgcg ctggcgggac gtttttattg cgtcagggtt gacatccgtt tttgtatcca
      541 gtaactctaa aagcatatcg cattcatctg gagctgattt aatgactcac atcgttcgct
      601 ttatcggtct actactacta aacgcatctt ctttgcgcgg tagacgagtg agcggcatcc
      661 agcattaagc cagcacgcag tcaaacaaaa aacccgcgcc attgcgcggg tttttttatg
      721 cccgaagcga ggcgctctaa aagagacaag gacccaaacc atgagccagc aagtcattat
      781 tttcgatacc acattgcgcg acggtgaaca ggcgttacag gcaagcttga gtgtgaaaga
      841 aaaactgcaa attgcgctgg cccttgagcg tatgggtgtt gacgtgatgg aagtcggttt
      901 ccccgtctct tcgccgggcg attttgaatc agtgcaaacc atcgcccgcc aggttaaaaa
      961 cagccgcgta tgcgcgttag ctcgctgcgt ggagaaagat atcgacgtgg cggccgaatc
     1021 cctgaaagtc gccgaagcct tccgtattca tacctttatt gccacttcgc caatgcacat
     1081 cgccaccaag ctgcgcagca cgctggatga agtgatcgaa cgcgctatct atatggtgaa
     1141 acgcgcccgt aattacaccg atgatgttga attttcttgc gaagatgccg ggcgtacccc
     1201 cattgccgat ctggcgcgag tggtcgaagc ggcgattaat gccggtgcca ccaccatcaa
     1261 cattccggac accgtgggct acaccatgcc gtttgagttc gccggaatca tcagcggtct
     1321 gtatgaacgc gtacctaaca tcgacaaagc cattatttcc gtacataccc acgacgattt
     1381 aggcctggcg gtcggcaact cactggcggc ggtacatgcc ggtgcacgcc aggtggaagg
     1441 tgcaatgaac gggatcggcg agcgtgccgg taactgttcg ctggaagaag tcatcatggc
     1501 gattaaagtt cgtaaggata ttctcaacgt ccacaccgcc attaatcacc aggagatatg
     1561 gcgcaccagc cagttagtta gccagatttg taatatgccg atcccggcaa acaaagccat
     1621 tgttggcagc ggcgcattcg cccactcctc cggtatccac caggatggcg tgctgaaaaa
     1681 ccgcgaaaac tacgaaatca tgacaccaga atctattggt ctgaaccaaa tccagctgaa
     1741 tctgacctct cgttcggggc gtgcggcggt gaaacatcgc atggatgaga tggggtataa
     1801 agaaagtgaa tataatttag acaatttgta cgatgctttc ctgaagctgg cggacaaaaa
     1861 aggtcaggtg tttgattacg atctggaggc gctggccttc atcggtaagc agcaagaaga
     1921 gccggagcat ttccgtctgg attacttcag cgtgcagtct ggctctaacg atatcgccac
     1981 cgccgccgtc aaactggcct gtggcgaaga agtcaaagca gaagccgcca acggtaacgg
     2041 tccggtcgat gccgtctatc aggcaattaa ccgcatcact gactataacg tcgaactggt
     2101 gaaatacagc ctgaccgcca aaggtcacgg taaagatgcg ctgggtcagg tggatattgt
     2161 cgccaactac aacggtcgcc gcttccacgg cgtcggcctg gccaccgata ttgtcgagtc
     2221 ctccgccaaa gccatggtgc acgtactgaa caatatctgg cgtgccgcag aagtcgaaaa
     2281 agagttgcaa cgcaaagctc aacacaacga aaacaacaag gaaaccgtgt gatgtcgaag
     2341 aattaccata ttgccgtatt gccgggggac ggtattggtc cggaagtgat gacccaggcg
     2401 ctgaaagtgc tggatgccgt gcgcaaccgc tttgcgatgc gcatcaccac cagccattac
     2461 gatgtaggcg gcgcagccat tgataaccac gggcaaccac tgccgcctgc gacggttgaa
     2521 ggttgtgagc aagccgatgc cgtgctgttt ggctcggtag gcggtccgaa atgggaacat
     2581 ttaccaccag accagcaacc agaacgcggc gcgctgttgc ctttgcgtaa gcacttcaaa
     2641 ttattcagca acctgcgtcc ggcaaaactg tatcaggggc tggaagcatt ctgtccgctg
     2701 cgtgctgaca ttgccgctaa cggcttcgac atcctgtgcg tgcgcgaact gaccggcggc
     2761 atctatttcg gtcagccaaa aggccgcgaa ggtagcggac agtatgaaaa agcgtttgat
     2821 accgaggtgt atcaccgttt tgagatcgaa cgtatcgccc gcatcgcgtt tgaatctgcc
     2881 cgcaagcgtc gccacaaagt cacctcaatc gacaaagcca acgtgctgca atcctctatt
     2941 ttatggcggg agatcgttaa cgagatcgcc acggaatacc cggatgtcga actggcgcat
     3001 atgtacatcg acaacgccac catgcagctg attaaagatc catcacagtt tgacgtcctg
     3061 ctgtgctcca acctgtttgg cgacattctg tctgacgagt gcgcaatgat cactggctcg
     3121 atggggatgt tgccttccgc cagcctgaac gagcaaggtt ttggtctgta tgaaccggca
     3181 ggcggctcag caccagatat cacaggcaaa aacatcgcca acccgattgc gcaaattctg
     3241 tcgctggcac tgctgctgcg ctacagcctg gatgccgatg atgcggcttg cgccattgaa
     3301 cgcgccatta accgcgcatt agaagaaggc attcgcaccg gggatttagc ccgtggcgct
     3361 gccgccgtta gtaccgatga aatgggcgat atcattgccc gctatgtggc agaaggggtg
     3421 taatcatggc taaaacgtta tacgaaaaat tattcgacgc tcacgtagtg tacgaagccg
     3481 aaaacgaaac cccgctgtta tatatcgacc gccacctggt gcatgaagtg acctcaccgc
     3541 aggcgttcga tggtctgcgc gcccacggtc gcccggtacg tcagccgggc aaaaccttcg
     3601 ccactatgga tcacaacgtc tctacccaga cgaaagacat taatgcctgt ggtgaaatgg
     3661 cgcgcatcca gatgcaggag ctgattaaaa actgcaaaga atttggcgtc gaactgtatg
     3721 acctgaatca cccgtatcag gggatcgtcc acgtaatggg gccggaacag ggcgtcacct
     3781 tgccggggat gaccattgtc tgcggcgact cgcataccgc cacccacggc gcgtttggcg
     3841 cactggcctt tggtatcggc acttccgaag ttgaacacgt actggcaacg caaaccctga
     3901 aacagggccg cgcaaaaacc atgaaaattg aagtccaggg caaagccgcg ccgggcatta
     3961 ccgcaaaaga tatcgtgctg gcaattatcg gtaaaaccgg tagcgcaggc ggcaccgggc
     4021 atgtggtgga gttttgcggc gaagcaatcc gtgatttaag catggaaggt cgtatgaccc
     4081 tgtgcaatat ggcaatcgaa atgggcgcaa aagccggtct ggttgcaccg gacgaaacca
     4141 cctttaacta tgtcaaaggc cgtttgcatg cgccgaaagg caaagatttc gacgacgccg
     4201 ttgcctactg gaaaaccctg caaaccgacg aaggcgcaac tttcgatacc gttgtcactc
     4261 tgcaagcaga agaaatttca ccgcaggtca cctggggcac caatccaggc caggtgattt
     4321 ccgtgaacga caatattccc gatccggctt cgtttgccga tccggttgaa cgcgcgtcgg
     4381 cagaaaaagc gctggcctat atggggctga aaccgggcat tccgctgacc gaagtggcta
     4441 tcgacaaagt gtttatcggt tcctgtacca actcgcgcat tgaagattta cgcgcggcag
     4501 cggagatcgc caaagggcga aaagtcgcgc caggcgtgca ggcactggtg gttcccggct
     4561 ctggccaggt aaaagcccag gcggaagcgg aaggtctgga taaaatcttt attgaagccg
     4621 gttttgaatg gcgcttgcct ggctgctcaa tgtgtctggc gatgaacaac gaccgtctga
     4681 atccgggcga acgttgtgca tccaccagca accgtaactt tgaaggccgc caggggcgcg
     4741 gcgggcgcac gcatctggtc agcccggcaa tggctgccgc tgctgctgtg accggacatt
     4801 tcgccgacat tcgcaacatt aaataaggag cagaccatgg cagagaaatt tatcaaacac
     4861 acaggcctgg tggttccgct ggatgccgcc aatgtcgata ccgatgcaat catcccgaaa
     4921 cagtttttgc agaaagtgac ccgtacgggt tttggcgcgc atctgtttaa cgactggcgt
     4981 tttctcgatg aaaaaggcca acagccaaac ccggacttcg tgctgaactt cccgcagtat
     5041 cagggcgctt ccattttgct ggcacgagaa aacttcggct gtggctcctc gcgtgagcac
     5101 gcgccctggg cattgaccga ctacggtttt aaagtggtga ttgcgccgag ttttgctgac
     5161 atcttctacg gcaatagctt taacaaccag ctgctgccgg tgaaattaag cgatgcagaa
     5221 gtggacgaac tgtttgcgct ggtgaaagcc aatccgggga tccatttcga cgtggatctg
     5281 gaagcgcaag aggtgaaagc gggagagaaa acctatcgct ttaccatcga tgccttccgc
     5341 cgccactgca tgatgaacgg tctggacagt attgggctta ccttgcagca cgacgacgcc
     5401 attgccgctt atgaagcaaa acaacctgcg tttatgaatt aatccccttg cccggtcaaa
     5461 tgaccgggct ttccgctatc gtccacgtca tcaaacgtct ttaacctttg cggttaaaaa
     5521 taatgcgaca acagaaataa ccgcaattac ccagtagaca gcaaagtgcc cccaactttg
     5581 tgcaattgct ccctgaataa cgccagccag aattaccccg gtagaaatac tgttagtaaa
     5641 taaggtggta gctgcccccg ctcttccagg cattaaatcc tgaaaccata gcatcccaat
     5701 acccgcaaca atgccgataa atacagcgtt aaaaagttgc agcgtcatca acgccatacg
     5761 gctatgaaag aaaatcaatc cggtgtaaaa cagtactcct gccgccactg ctatgaccat
     5821 cattcgccgc ttaccataac gtttgacata gtagccagcc agaatcattg ctggtatttc
     5881 cagtccagct gccgtcccca tcaggaaacc cgccagtttg tctggcaatc ctaactcgct
     5941 actgatccac aacggcatat caataatgta catggtgttg caggtccaca ttaacgtcga
     6001 ggcgacaaat aacatccgta cgttactatc ctgccagcca ccttgcattg ataaagcatt
     6061 ttccgacggc agttctaccc gcgccacaga cggaagcata aatgcaatca ataccagact
     6121 gagtgtgaat atcccggcgg caatcgaaaa catcaccact tctcgcgccg agttatcctc
     6181 atattcccgc gccagagcaa ataactgtgg cattgccgta ttggccagag atgccagaag
     6241 cacaccacag gtgataagcg tcagataatg acgattaaat gcaaacaatg gcgcattgcc
     6301 gatagccatc aaacagcaaa atataatcag ttttcgccga tcgccctgac tgtcagaacg
     6361 ttttgccaac cagaggctta cgccgatccc agcaatagta ttcaccgtat aaaagagtcc
     6421 gatccagaaa ggttgcgcgc caacctcacg actcagaaat aagctcaatg taggagcctg
     6481 tagcgccccg gccaccccca tcataaaagc gaccagcata aatgccgcgt aaacaccgtt
     6541 catacggcga gccatcgtca ttatccagat catacgttcc ctttttagcg cggcgagaat
     6601 aaaaaaacca gcaggtataa tctgctggcg ggtgatttta caccaatact cagtcacaca
     6661 tgatgcaggc aagtcaactt tcagaattgc ggtcatccca ctgcatcagt ccttcaagca
     6721 tggttaatcg ttgtgggacg cttaaccaac gcaaccagca caacttcgct gtcgcggtaa
     6781 aatagtgctg ataaaactga cgcatggggc acctccttgc ttcatcgtta ggaattattg
     6841 acttaatata gggaaaataa aattgctgtc ttttgcgcag gagttcccct tttatgccat
     6901 ctgctcgtct gcaacaacag ttcatccgcc tgtggcaatg ctgcgagggt aaatcgcagg
     6961 acacaacgct caacgaactg gcagcgttat tgagctgctc gcgtcgtcat atgcgtaccc
     7021 tgctcaacac catgcaggat cgcggctggc tgacgtggga agcggaagtc gggcgcggta
     7081 aacgctcgcg tctgacattc ctctataccg ggctggcgct tcagcaacag cgggcggaag
     7141 acctgctgga gcaggatcgt atcgaccaac tagtgcagtt ggttggcgac aaagcgactg
     7201 tgcggcaaat gctggtttct catctgggcc gcagcttccg ccaggggcgg cacatcctgc
     7261 gcgtgctcta ctatcgtccg ttgcgtaatc tgctacctgg cagcacattg cgccgttccg
     7321 aaacccatat tgcccggcaa atcttcagtt cgctaacgcg cataaatgag gaaaatgggg
     7381 aactggaagc agacatcgcc caccactggc agcaaatatc accgcttcac tggcgtttct
     7441 ttttgcgtcc aggagtccat tttcatcatg gtcgtgaact ggaaatggac gacgtgatcg
     7501 cctctttaaa acgaatcaat acgctgccgc tctattcgca tattgcggac attgtgtcgc
     7561 cgacgccctg gacgctggat atccatctca cgcaaccgga ccgctggtta ccgttactgc
     7621 tggggcaagt tccggcgatg atcctgccgc gcgaatggga aaccctcagt aactttgcca
     7681 gccatcccat cggcaccggt ccgtatgcgg tgatccgcaa caccaccaat caactgaaaa
     7741 ttcaggcatt cgatgacttc ttcggttacc gggcattaat cgatgaagtt aacgtctggg
     7801 ttctgccgga aattgccgac gagccagctg gaggtctgat gctaaaaggt ccacagggtg
     7861 aggaaaaaga gattgaaagc cgcctggagg aaggttgcta ctatttacta ttcgacagcc
     7921 gcacccatcg cggagcgaat cagcaagtca gggactgggt aaactatgtg ctttctccaa
     7981 ctaatctggt ctatttcgct gaggaacagt accagcaact gtggttcccg gcttatggac
     8041 tgctcccccg ttggcaccat gcccgcacca taaagagcga aaaaccggct ggcctggaaa
     8101 gcctcaccct gaccttttat caggatcaca gtgagcatcg ggtgattgcc gggatcatgc
     8161 agcagattct ggcaagtcac caggtcacgc tggaaatcaa agagatcagc tacgatcagt
     8221 ggcatgaagg agagatcgag agcgatatct ggcttaatag cgccaacttt acgctgccgc
     8281 tggatttttc gctgttcgcg cacttgtgcg aggtgccgct gctccaacac tgtattccga
     8341 tcgactggca agccgacgcc gcccgctggc gcaatggcga aatgaacctg gcgaactggt
     8401 gccagcaact ggtcgccagt aaagcaatgg tgccgcttat ccaccactgg ctgatcattc
     8461 agggacaacg cagtatgcgc ggcctgcgta tgaataccct cggctggttc gattttaaat
     8521 cagcgtggtt tgcgccgccg gatccatgat tgctggtaga taacaaaatc actacactaa
     8581 cgccgttctc aacggggtgc cacgcaaacg cgtgcgctga gaaaataccc gtcgaacctg
     8641 atccggataa cgccggcgaa gggatttgag gctccttctc aagtcctttg ccactctttt
     8701 ttgaggtgca aagtgttaaa aaaatgtctt cccctgctgt tgctgtgcac agcgcccgtt
     8761 ttcgctaaac ccgttctgac tgtttatacc tacgattcct tcgccgccga ctgggggcct
     8821 ggtccaaaga tcaaaaaagc ttttgaagcc gactgtaact gcgaactgaa actggtggcg
     8881 ctggaagatg gcgtttcgct tctcaaccgt ctacggatgg aaggcaaaaa tagtaaagcc
     8941 gatgtggtgc tggggctgga taacaatctg ttagacgccg ccagtaaaac cggactattt
     9001 gccaaaagcg gtgtggcagc ggatgccgtt aacgttcccg gcggctggaa taatgacact
     9061 ttcgtcccgt ttgattacgg ctatttcgcc ttcgtctatg acaagaacaa actgaaaaac
     9121 ccgccgcaaa gcctgaaaga attggttgag agcgatcaaa actggcgggt gatttatcag
     9181 gatccgcgca ccagtacgcc ggggctgggc ctgctgttgt ggatgcaaaa agtctatggc
     9241 gatgacgccc cacaagcctg gcaaaaactg gcgaagaaaa ccgtcacggt caccaaaggc
     9301 tggagcgaag cctacggcct gtttttaaaa ggtgaaagcg atctggtact gagttacacc
     9361 acctctccgg cttatcacat tctcgaagag aaaaaagata actacgccgc cgcgaacttt
     9421 agcgaaggtc actatctgca ggtggaagtc gccgcccgca ccgctgccag caagcagccg
     9481 gagctggcgc aaaaattcct ccagtttatg gtttctccgg cttttcagaa tgcgatccca
     9541 accggtaact ggatgtatcc ggtggcaaat gtcacgctgc ctgccgggtt tgaacaattg
     9601 accaaaccgg ccaccacgct ggagttcaca ccagctgaag tggcggcaca acgtcaggca
     9661 tggattagcg gatggcaacg cgccgtcagc cgttaattcc cggctggtta attccaggtg
     9721 taagcgccgc cacgctggtg gtagcggttg cgctcgcggc gtttctcgcc ctgtggtgga
     9781 acgcgccgca gggtaactgg gtggcagtct ggcaggacag ctacctgtgg catgtggtgc
     9841 gcttctcctt ctggcaggcg tttctctcgg cgctactctc tgtcgtaccc gcgatattcc
     9901 tcgcccgcgc cctctatcgc aggcgctttc cgggtcggct ggcgctgttg cgtctgtgcg
     9961 caatgacctt gatcctcccg gtgctggttg ctgttttcgg cattcttagc gtctatggtc
    10021 gccagggctg gctggcatcg ctctgccaat cgctcggtct ggagtggacc ttttcgccct
    10081 acggcctgca aggtattttg ctggcgcacg tattttttaa tctgccgatg gcgagccgct
    10141 tattactcca ggcactggaa aacattcccg acgaacaacg tcagcttgcc gcccagcttg
    10201 ggatgcgcgg ctggcatttt ttccgcttcg tcgaatggcc gtggttacgg cgacaaatcc
    10261 cgccggttgc tgcacttatc tttatgctct gtttcgccag cttcgccacc gtgctatcac
    10321 tgggcggcgg tccgcaggcg accactatcg agctggctat ttatcaggcg ctgagttacg
    10381 actacgatcc tgcccgcgcg gcgatgctgg cgctgatcca gatggtgtgt tgccttgggc
    10441 tggtactgtt gagtcagcga ttgagtaagg ccattgcgcc aggcaccacg ctgctgcaag
    10501 gctggcgcga cccggacgat cgtctgcata gccgcatttg cgacacggtg ttaatagtgc
    10561 tggcgttgct gctgttgttg ccaccgttgc tggcggtgat cgtcgatggg gtaaatcgcc
    10621 agttgccgga agtgctggca caaccggtgc tgtggcaggc gctgtggacc tcgttgcgta
    10681 ttgcgctggc ggcaggtgta ttgtgcgtag tgctgaccat gatgctgcta tggagcagtc
    10741 gcgaacttcg ggcacggcag aaaatgctgg cgggtcaggc gctggagatg agcggcatgt
    10801 tgattctcgc catgccgggg attgtgctgg ctaccggctt ctttttactg ctcaacaaca
    10861 ctatcggcct gcaacaatct gctgacggca ttgtgatttt caccaatgcg ttaatggcga
    10921 tcccttatgc gctgaaagta ctggaaaacc cgatgcgcga tatcaccgcc cgctacagta
    10981 tgttgtgtca gtcgctgggc attgaaggct ggtcgcgctt aaaagtggtg gagctgcgcg
    11041 ccctgaaacg tccactggcg caggcgctgg cctttgcctg cgtgctgtcg attggtgatt
    11101 ttggcgtggt ggcgttgttc ggtaacgatg atttccgtac cctgccgttt tatctctacc
    11161 agcaaattgg ctcctatcgc agccaggacg gcgcggtcac cgcgttaatt ctgctgctac
    11221 tctgttttct gctgtttacc gtgattgaaa aactaccggg gcgaaatgtt aaaactgact
    11281 gatatcacct ggctttacca acatttgccg atgcgtttta gcttaacggt ggaacgcggc
    11341 gagcaggtgg cgatcctcgg gccaagcggc gcaggtaaaa gtaccctgct gaatttgatt
    11401 gccggttttc tgacgccagc cagcggttcg ctgactatcg atggcgttga tcacaccacg
    11461 acgccgccgt cacgccgtcc ggtgtcgatg ctgtttcagg agaacaacct gttcagccac
    11521 ctgacggtcg cgcagaacat cgggctgggg cttaatccag gattgaagct gaacgcggca
    11581 cagcaggaga aaatgcacgc tatcgcccgt cagatgggga ttgataattt aatggcgcgg
    11641 ttaccgggcg agctttccgg cggccagcga cagcgcgtgg cgttagcgcg ttgtctggtg
    11701 cgcgaacagc cgattttatt gctcgatgaa ccgttctctg cgctcgatcc ggcgttacgt
    11761 caggagatgc tgacgctggt gagcacgagc tgccagcagc aaaaaatgac gctattgatg
    11821 gtgtcgcaca gtgtggaaga tgcggcgcgg atcgccacac gctcggtggt ggtcgccgac
    11881 gggcgcatcg cctggcaggg taagactgaa gaattgttga gcggtaaggc gagtgcttcg
    11941 gcaatattgg ggattacggg ttagtatgca ctgtcagatg cggcgtgaac accttatccg
    12001 acctacggac agtgcgtttt gtaggcctga taagaccggt cagcgtcgca tcaggcaacc
    12061 cgcacaagac aatcccctaa accccaacca ctttacgcaa aatatcgata tacaccggca
    12121 tcaacgggtg gcgaattaac accaccagcg ccaccacgcc gatggcagaa atcaacggcg
    12181 tcagccacaa caaacggccg cgcgacaaat aatgacttaa acgatcggtt gctttaccgc
    12241 tgcgccataa ccgccagcac agccagccac caacccacaa aaataccgcc gtcgccagca
    12301 gcaaccattt aaactcgccg ctctgcattc cggctggaat atcgatcgcc gcgcccgcca
    12361 gaatcccagg caggaagtaa aacggtggcc acagcaggca gccgataata ttcggcgtaa
    12421 tgaattttgc caccggcaga tccagcattc ccgccaccat tggcaccagc ggacgcgtcg
    12481 ggccaacaaa gcgaccgacc agaatggtga acatgctgtg ttgatgcaac gcatgttcag
    12541 ttttatcgag taatgctttg tttttcttca gaaatgacca gcgatgcaac ggctttttaa
    12601 aacgccagcc cagccagaag gagatccagt cgcccagcag acaaccgaca atccctgcca
    12661 gccaggcgtg ccagaaactt aactcgccgc tgccaatcag cgctcccagc cccgccatca
    12721 gcaccgtacc gggtagaatc aaaccgacca gcgccagcga ctccagaaag gccaccaaca
    12781 ccaccgccat caatgaatac acggtagatt gggtaataaa gtgttccagc aatgcttgca
    12841 taatgtgcct gtcaaatgga cgaagcaggg attctgcaaa ccctatgcta ctccgtcaag
    12901 ccgtcaattg tctgattcgt taccaattat gacaacttga cggctacatc attcactttt
    12961 tcttcacaac cggcacggaa ctcgctcggg ctggccccgg tgcatttttt aaatacccgc
    13021 gagaaataga gttgatcgtc aaaaccaaca ttgcgaccga cggtggcgat aggcatccgg
    13081 gtggtgctca aaagcagctt cgcctggctg atacgttggt cctcgcgcca gcttaagacg
    13141 ctaatcccta actgctggcg gaaaagatgt gacagacgcg acggcgacaa gcaaacatgc
    13201 tgtgcgacgc tggcgatatc aaaattgctg tctgccaggt gatcgctgat gtactgacaa
    13261 gcctcgcgta cccgattatc catcggtgga tggagcgact cgttaatcgc ttccatgcgc
    13321 cgcagtaaca attgctcaag cagatttatc gccagcagct ccgaatagcg cccttcccct
    13381 tgcccggcgt taatgatttg cccaaacagg tcgctgaaat gcggctggtg cgcttcatcc
    13441 gggcgaaaga aacccgtatt ggcaaatatt gacggccagt taagccattc atgccaatag
    13501 gcgcgcggac gaaagtaaac ccactggtga taccattcgc gagcctccgg atgacgaccg
    13561 tagtgatgaa tctctcctgg cgggaacagc aaaatatcac ccggtcggca aacaaattct
    13621 cgtccctgat ttttcaccac cccctgaccg cgaatggtga gattgagaat ataacctttc
    13681 attcccagcg gtcggtcgat aaaaaaatcg agataaccgt tggcctcaat cggcgttaaa
    13741 cccgccacca gatgggcatt aaacgagtat cccggcagca ggggatcatt ttgcgcttca
    13801 gccatacttt tcatactccc gccattcaga gaagaaacca attgtccata ttgcatcaga
    13861 cattgccgtc actgcgtctt ttactggctc ttctcgctaa cccaaccggt aaccccgctt
    13921 attaaaagca ttctgtaaca aagcgggacc aaagccatga caaaaacgcg taacaaaagt
    13981 gtctataatc acggcagaaa agtccacatt gattatttgc acggcgtcac actttgctat
    14041 tccatagcat ttttatccat aagattagcg gatcctacct gacgcttttt atcgcaactc
    14101 tctactgttt ctccataccc gtttttttgg atggagtgaa acgatggcga ttgcaattgg
    14161 cctcgatttt ggcagtgatt ctgtgcgagc tttggcggtg gactgcgcca gcggtgaaga
    14221 gatcgccacc agcgtagagt ggtatccccg ttggcaaaaa gggcaatttt gtgatgcccc
    14281 gaataaccag ttccgtcatc atccgcgtga ctacattgag tcaatggaag cggcactgaa
    14341 aaccgtgctt gcagagctta gcgtcgaaca gcgcgcagct gtggtcggga ttggcgttga
    14401 cagtaccggc tcgacgcccg caccgattga tgccgacggt aacgtgctgg cgctgcgccc
    14461 ggagtttgcc gaaaacccaa acgcgatgtt cgtattgtgg aaagaccaca ctgcggttga
    14521 agaagcggaa gagattaccc gtttgtgcca cgcgccgggc aacgttgact actcccgcta
    14581 cattggtggt atttattcca gcgaatggtt ctgggcaaaa atcctgcatg tgactcgcca
    14641 ggacagcgcc gtggcgcaat ctgccgcatc gtggattgag ctgtgcgact gggtgccagc
    14701 tctgctttcc ggtaccaccc gcccgcagga tattcgtcgc ggacgttgca gcgccgggca
    14761 taaatctctg tggcacgaaa gctggggcgg cttgccgcca gccagtttct ttgatgagct
    14821 ggacccgatc ctcaatcgcc atttgccttc cccgctgttc actgacacct ggactgccga
    14881 tattccggtg ggcaccttat gcccggaatg ggcgcagcgt ctcggcctgc ctgaaagcgt
    14941 ggtgatttcc ggcggcgcgt ttgactgcca tatgggcgca gttggcgcag gcgcacagcc
    15001 taacgcactg gtaaaagtta tcggtacttc cacctgcgac attctgattg ccgacaaaca
    15061 gagcgttggc gagcgggcag ttaaaggtat ttgcggtcag gttgatggca gcgtggtacc
    15121 tggatttatc ggtctggaag caggccaatc ggcgtttggt gatatctacg cctggtttgg
    15181 tcgcgtactc ggctggccgc tggaacagct tgccgcccag catccggaac tgaaagcgca
    15241 aatcaacgcc agccagaaac aactgcttcc ggcgctgacc gaagcatggg ccaaaaatcc
    15301 gtctctggat cacctgccgg tggtgctcga ctggtttaac ggccgccgca caccgaacgc
    15361 taaccaacgc ctgaaagggg tgattaccga tcttaacctc gctaccgacg ctccgctgct
    15421 gtttggcggt ttgattgctg ccaccgcctt tggcgcacgc gcaatcatgg agtgctttac
    15481 cgatcagggg atcgccgtca ataacgtgat ggcgctgggc ggcatcgcgc ggaaaaacca
    15541 ggtcattatg caggcctgct gcgacgtgct gaatcgcccg ctgcaaattg ttgcctctga
    15601 ccagtgctgt gcgctcggtg cggcgatttt tgctgccgtc gccgcgaaag tgcacgcaga
    15661 catcccatca gcccagcaaa aaatggccag tgcggtagag aaaaccctgc aaccgcgcag
    15721 cgaacagaca caacgctttg aacagcttta tcgccgctat cagcaatggg cgatgagcgc
    15781 cgaacaacac tatcttccaa cttccgcccc ggcacaggct gcccaggccg ttccgactct
    15841 ataaggacac gataatgacg atttttgata attatgaagt gtggtttgtc attggcagcc
    15901 agcatctgta tggcccggaa accctgcgtc aggtcaccca acatgccgag cacgttgtta
    15961 atgcgctgaa tacggaagcg aaactgccct gcaaactggt gttgaaaccg ctgggcacca
    16021 cgccggatga aatcaccgct atttgccgcg acgcgaatta cgacgatcgt tgcgctggtc
    16081 tggtggtgtg gctgcacacc ttctccccgg ccaaaatgtg gatcaacggc ctgaccatgc
    16141 tcaacaaacc gttgctgcaa ttccacaccc agtttaacgc ggcgctgccg tgggacagta
    16201 tcgatatgga ctttatgaac ctgaaccaga ctgcacatgg cggtcgcgag ttcggcttca
    16261 ttggcgcgcg tatgcgtcag caacatgccg tggttaccgg tcactggcag gataaacaag
    16321 cccatgagcg tatcggctcc tggatgcgtc aggcggtctc taaacaggat acccgtcatc
    16381 tgaaagtctg ccgttttggc gataacatgc gtgaagtagc ggtcaccgat ggtgataaag
    16441 ttgccgcaca gatcaagttc ggtttctccg tcaatacctg ggcggttggc gatctggtgc
    16501 aggtggtgaa ctccatcagc gacggcgatg ttaacgcgct ggtcgatgag tacgaaagct
    16561 gctacaccat gacgcctgcc acacaaatcc acggcgaaaa acgacagaac gtgctggaag
    16621 cggcgcgtat tgagctgggg atgaagcgtt tcctggaaca aggtggcttc cacgcgttca
    16681 ccaccacctt tgaagatttg cacggtctga aacagcttcc aggtctggcc gtacagcatc
    16741 tgatgcagca gggttacggc tttgcgggcg aaggcgactg gaaaaccgcc gccctgcttc
    16801 gcatcatgaa ggtgatgtca accggtctgc agggcggcac ctcctttatg gaggactaca
    16861 cctatcactt cgagaaaggt aatgacctgg tgctcggctc ccatatgctg gaagtctgcc
    16921 cgtcgattgc cgtagaagag aaaccgatcc tcgacgttca gcatctcggt attggtggta
    16981 aggacgatcc tgcccgactg atcttcaata cccaaaccgg tccagcgatt gtcgccagcc
    17041 tgattgatct cggcgatcgt taccgtctgc tggttaactg tatcgacacg gtgaaaacac
    17101 cgcactccct gccgaaactg ccggtggcga atgcgctgtg gaaagcgcaa ccggatctgc
    17161 caactgcttc cgaagcgtgg atcctcgctg gtggcgcgca ccataccgtc ttcagccatg
    17221 cgctgaacct caacgatatg cgtcagttcg ccgagatgca cgacattgaa atcacggtga
    17281 ttgataacga cacccgcctg ccagcgttta aagacgcact gcgctggaac gaagtgtatt
    17341 acggatttcg tcgctaagta gccacatcag gtatgtaacg cctgatgcga cgctgacgcg
    17401 tcttatctgg cctacacgct gcgattttgt aggccggata agcaaagcgc atccggcatt
    17461 caacgcctga tgcgacgctg gcgcgtctta tcaggcctac gcgctgcgat tttgtagacc
    17521 ggataagcga agcgcatccg gcacgaagga gtcaacatgt tagaagatct caaacgccag
    17581 gtattagaag ccaacctggc gctgccaaaa cacaacctgg tcacgctcac atggggcaac
    17641 gtcagcgccg ttgatcgcga gcgcggcgtc tttgtgatca aaccttccgg cgtcgattac
    17701 agcgtcatga ccgctgacga tatggtcgtg gttagcatcg aaaccggtga agtggttgaa
    17761 ggtacgaaaa agccctcctc cgacacgcca actcaccggc tgctctatca ggcattcccc
    17821 tccattggcg gcattgtgca tacgcactcg cgccacgcca ccatctgggc gcagtcgggt
    17881 cagtcgattc cagcaaccgg caccacccac gccgactatt tctacggcac cattccctgc
    17941 acccgcaaaa tgaccgacgc agaaatcaac ggcgaatatg agtgggaaac cggtaacgtc
    18001 atcgtagaaa cctttgaaaa acagggtatc gatgcagcgc aaatgcccgg cgttctggtc
    18061 cattcccacg gcccgtttgc atggggcaaa aatgccgaag atgcggtgca taacgccatc
    18121 gtgctggaag aggtcgctta tatggagata ttctgccgtc agttagcgcc gcagttaccg
    18181 gatatgcagc aaacgctgct ggataaacac tatctgcgta agcatggcgc gaaggcatat
    18241 tacgggcagt aatgactgta taaaaccaca gccaatcaaa cgaaaccagg ctatactcaa
    18301 gcctggtttt ttgatggatt ttcagcgtgg cgcaggcagg ttttatctta acccgacact
    18361 ggcgggacac cccgcaaggg acagaagtct ccttctggct ggcgacggac aacgggccgt
    18421 tgcaggttac gcttgcaccg caagagtccg tggcgtttat tcccgccgat caggttcccc
    18481 gcgctcagca tattttgcag ggtgaacaag gctttcgcct gacaccgctg gcgttaaagg
    18541 attttcaccg ccagccggtg tatggccttt actgtcgcgc ccatcgccaa ttgatgaatt
    18601 acgaaaagcg cctgcgtgaa ggtggcgtta ccgtctacga ggccgatgtg cgcccgccag
    18661 aacgctatct gatggagcgg tttatcacct caccggtgtg ggtcgagggt gatatgcaca
    18721 atggcactat cgttaatgcc cgtctgaaac cgcatcccga ctatcgtccg ccgctcaagt
    18781 gggtttctat agatattgaa accacccgcc acggtgagct gtactgcatc ggcctggaag
    18841 gctgcgggca gcgcatcgtt tatatgctgg ggtcggagaa tggcgacgcc tcctcgcttg
    18901 atttcgaact ggaatacgtc gccagccgcc cgcagttgct ggaaaaactc aacgcctggt
    18961 ttgccaacta cgatcctgat gtgatcatcg gttggaacgt ggtgcagttc gatctgcgaa
    19021 tgctgcaaaa acatgccgag cgttaccgtc ttccgctgcg tcttgggcgc gataatagcg
    19081 agctggagtg gcgcgagcac ggctttaaaa acggcgtctt ttttgcccag gctaaaggtc
    19141 ggctaattat cgacggtatc gaggcgctga aatccgcgtt ctggaatttc tcttcattct
    19201 cgctggaaac tgtcgctcag gagctattag gcgaaggaaa atctatcgat aacccgtggg
    19261 atcgaatgga cgaaattgac cgccgtttcg ccgaagataa acctgcgctg gcaacttata
    19321 acctgaaaga ttgcgagctg gtgacgcaga tcttccacaa aactgaaatc atgccatttt
    19381 tactcgaacg ggcaacggtg aacggcctgc cggtggaccg acacggcggt tcggtggcgg
    19441 catttggtca tctctatttt ccgcgaatgc atcgcgctgg ttatgtcgcg cctaatctcg
    19501 gcgaagtgcc gccgcacgcc agccctggcg gctacgtgat ggattcacgg ccagggcttt
    19561 atgattcagt gctggtgctg gactataaaa gcctgtaccc gtcgatcatc cgcacctttc
    19621 tgattgatcc cgtcgggctg gtggaaggca tggcgcagcc tgatccagag cacagtaccg
    19681 aaggttttct cgatgcctgg ttctcgcgag aaaaacattg cctgccggag attgtgacta
    19741 acatctggca cgggcgcgat gaagccaaac gccagggtaa caaaccgctg tcgcaggcgc
    19801 tgaaaatcat catgaatgcc ttttatggcg tgctcggcac caccgcctgc cgcttcttcg
    19861 atccgcggct ggcatcgtcg atcaccatgc gtggtcatca gatcatgcgg caaaccaaag
    19921 cgttgattga agcacagggc tacgacgtta tctacggcga taccgactca acgtttgtct
    19981 ggctgaaagg cgcacattcg gaagaagaag cggcgaaaat cggtcgtgca ctggtgcagc
    20041 acgttaacgc ctggtgggcg gaaacgctgc aaaaacaacg gctgaccagc gcattagaac
    20101 tggagtatga aacccatttc tgccgttttc tgatgccaac cattcgcgga gccgataccg
    20161 gcagtaaaaa gcgctacgcc gggctgattc aggagggcga taaacagcgg atggtgttta
    20221 aagggctgga aaccgtgcgc accgactgga cgccgctggc ccagcagttt cagcaggagc
    20281 tatacctgcg catcttccgc aacgagccat atcaggaata tgtacgcgaa accatcgaca
    20341 aactgatggc gggtgaactg gatgcgcgac tggtttaccg taaacgcctt cgccgtccgc
    20401 tgagcgagta tcagcgtaat gtgccgcctc atgtacgcgc cgctcgcctt gccgatgaag
    20461 aaaaccaaaa gcgtggtcgc cccttgcaat atcagaatcg cggcaccatt aagtacgtat
    20521 ggaccaccaa cggcccggag ccgctggact accaacgttc accactggat tacgaacact
    20581 atctgacccg ccagctacaa cccgtggcgg agggaatact cccttttatt gaggataatt
    20641 ttgctacact tatgaccggg caacttgggc tattttgagc aaaaaaagag ttcgccagat
    20701 accattttga tgcgtgacga atgctttgcc atccagtacc atagcgccct ttccattcct
    20761 ggacctgaat aacaccacta cctcataagc acggtagcgg gtggttattg cctgcaatta
    20821 aagatataga gccgaacaca tatgcctttt acacttggtc aacgctggat cagcgataca
    20881 gaaagcgaat tgggacttgg aaccgttgtc gcggtggatg cgcgaactgt cactttactt
    20941 ttcccatcta ctggtgaaaa ccgtctgtac gcacgcagtg attcccccgt gacccgcgtg
    21001 atgttcaacc ctggtgatac cattaccagc catgacggct ggcagatgca agtcgaagaa
    21061 gtaaaagaag aaaatggctt gctgacctat atcggtactc gcctggatac tgaagagtcc
    21121 ggcgtagccc tgcgtgaagt tttccttgat agcaaactgg tgttcagcaa accgcaggac
    21181 cgcctgtttg ccgggcagat tgaccgtatg gaccgctttg cgctgcgtta tcgcgcgcgt
    21241 aagtattcca gcgaacagtt ccgtatgccg tacagcggcc tgcgcggtca gcgtaccagc
    21301 ctgatcccgc accagctcaa catcgctcat gatgttggcc gccgccacgc gccgcgcgtc
    21361 ctgctggctg acgaagtggg tttagggaaa accattgaag ccgggatgat cctgcatcag
    21421 caactgctct ctggcgctgc tgaacgtgtg ctgattatcg tcccggaaac cttacagcat
    21481 cagtggctgg tagaaatgct gcgccgtttc aacctgcgct ttgctctgtt tgatgatgag
    21541 cgttatgccg aagctcagca cgatgcttac aacccgttcg acaccgaaca gctggtgatt
    21601 tgctcgctgg attttgcccg tcgtagcaaa cagcgcctgg aacatctctg tgaagccgaa
    21661 tgggacctgc tggtggtcga tgaagcgcat cacctggtgt ggagcgaaga tgcgccaagc
    21721 cgtgaatatc aggccattga acaactggca gagcacatgc cgggcgttct gctgctgacc
    21781 gcgaccccgg aacagctggg gatggaaagc cacttcgccc gtctgcgtct gctggacccg
    21841 aaccgtttcc acgattttgc gcagttcgtt gaagagcaga aaaattatcg tccggttgcg
    21901 gacgccgttg ccatgctgct ggcaggtaac aaactgagca atgacgaact gaacatgctc
    21961 ggcgagatga tcggcgagca ggatatcgag ccgctgttgc aggcagcaaa cagcgacagc
    22021 gaagatgccc agagcgcccg tcaggagctg gtttcgatgc tgatggatcg ccacggcacc
    22081 agccgcgtgc tgttccgtaa cacgcgtaac ggtgtgaaag gattcccgaa acgcgagctg
    22141 cacaccatta agctgccgct accgacgcag tatcagacgg ctattaaagt ctccggcatt
    22201 atgggcgcac gtaaaagtgc ggaagatcgt gctcgcgata tgctctaccc ggagcgtatt
    22261 tatcaggaat ttgaaggtga taacgccacc tggtggaact tcgatccgcg cgttgagtgg
    22321 ctgatgggct acctgaccag ccatcgctct cagaaagtgc tggtgatctg cgccaaagct
    22381 gccactgcgc tgcaactgga gcaggtactg cgcgaacgtg aaggtattcg cgctgcggtg
    22441 ttccacgaag gtatgtcgat tatcgaacgt gaccgcgctg ccgcctggtt tgccgaagaa
    22501 gacaccggcg cacaggtact gctgtgctca gaaatcggtt ctgaaggacg taacttccag
    22561 ttcgccagcc acatggtgat gtttgacctg ccattcaacc cggatctact ggagcagcgt
    22621 attggtcgtc tggatcgtat cggccaggcg cacgatattc agatccatgt gccttatctg
    22681 gagaaaaccg ctcagtcggt gctggtgcgc tggtatcacg aaggtctgga tgcatttgag
    22741 cacacctgcc cgaccggacg cactatttac gatagcgtat acaacgatct gattaactat
    22801 ctggcttcac cggatcaaac cgaaggcttt gacgatctga tcaaaaactg ccgcgagcaa
    22861 catgaagcgc tgaaagcaca gctggaacag ggtcgtgacc gcctgctgga aatccactcc
    22921 aacggtggcg aaaaagccca ggcactggca gaaagcattg aagagcagga tgacgatacc
    22981 aacctgatcg ccttcgccat gaacctgctc gatattatcg gtatcaatca ggacgatcgc
    23041 ggcgacaaca tgatcgtgct gacgccgtcc gatcatatgc tggtgccgga cttccctggc
    23101 ctgtcggaag atggcatcac catcaccttt gatcgtgaag tggcgctggc gcgtgaagat
    23161 gcacagttta ttacctggga gcatccgctg atccgcaacg gtctggatct gatcctttct
    23221 ggcgataccg gtagcagcac gatttcactg ttaaaaaaca aagcgttgcc ggtaggtacg
    23281 ctgttggtgg aactgattta tgtggttgaa gcccaggctc cgaagcagtt gcagctcaac
    23341 cgcttcctgc caccgacgcc ggtacgtatg ctgctggata aaaacggcaa caacctggcg
    23401 gcgcaggtag agtttgaaac ctttaaccgc cagcttaacg cggttaaccg tcacaccggc
    23461 agcaaactgg ttaacgccgt gcagcaggat gttcacgcta tccttcaact gggtgaagcg
    23521 cagatcgaga aatctgcccg tgcattgatt gatgcagcgc gtaacgaagc cgacgaaaaa
    23581 ctgtctgccg agctgtctcg tctggaagct ctgcgtgcag tgaacccgaa cattcgtgac
    23641 gacgaactga ccgccattga gagcaaccgt cagcaggtaa tggaaagcct ggatcaggca
    23701 ggttggcgtc tggatgccct gcgtttgatc gttgtaacgc atcagtaacg gagccgaaaa
    23761 tggggatgga aaactacaat ccaccgcagg aaccctggtt ggttatcctg tatcaggatg
    23821 accacattat ggtggttaac aagccgagcg gtttgttgtc tgtgccgggg cgtctggaag
    23881 agcacaaaga cagcgtgatg acgcgcattc agcgtgatta tccgcaggca gaatcggtgc
    23941 atcgtctgga tatggctacc agcggcgtga ttgtagtggc gctgaccaaa gccgcggagc
    24001 gggagttaaa acgccagttc cgcgagcgcg agccgaaaaa gcagtatgtg gcccgcgtct
    24061 gggggcatcc atcccctgcg gaaggtctgg tggatctgcc gctgatttgc gactggccaa
    24121 accgcccgaa acagaaagtc tgttacgaaa cgggtaaacc tgcgcagacg gaatatgaag
    24181 tggtggagta tgcggcggat aacacggcaa gagtggtgtt aaaaccgatt actgggcgtt
    24241 cgcatcaatt gcgtgtgcat atgctggcgc tggggcatcc gattctcggc gatcgttttt
    24301 atgcatcacc agaagcgaga gcgatggcac cgcgtttgtt gctacatgca gagatgttga
    24361 cgattaccca tccggcgtat ggcaatagta tgacgtttaa agcgccagcg gatttttaat
    24421 agtcacgctg gcgcagttcg gtaggcggat aaggcgttca cgccgaatcc ggcaattgtg
    24481 cgccgattgc ctgatgcgac gcgggccgcg tcttatcagg cctacagttt aaaacttatt
    24541 taaacccttt ctgctgcttt atcagctcat atgcctgctg aatttcctgc gctttctgct
    24601 tcgccatctc catcatctca ggcggcaaac ctttcgccac cagcttatcg ggatggtgtt
    24661 cactcatcag cttacggtag gctcgtttaa tggtggtcgc atcatccgtc ggcttcacac
    24721 ccagcacatt acaggcatct tccagcgtcg ggccacgctg cgcttgctgc cagttaccac
    24781 cgccagattg ctgctgataa ccgccgccaa actgtgcacc gccctgcatc atgcgcaaaa
    24841 actggtcaaa ctgggcgcgg gagatcccta attcttctgc aatgacatac agcaccgccc
    24901 gttcattcgg gtgcagtgaa ccatcagcaa acgctgcctg aatctggatc tccagaaaca
    24961 tacgaattaa gtcaaaacga ccaaagcaga cactgcgaaa ctggcgcatc ttttcgcgca
    25021 gcgggtaatt gtctgatttt cccacccgga acgcgttttg cgccgcagta cgggaagcgc
    25081 catgaaggtt cattcggtcc atcagctggc tggcgatatg aatatcagcc tccgtgacgc
    25141 gacctttgga tttggttaaa tgccccatca cttcaaaagt ggtggcaaaa aacagcgcct
    25201 gacgctcacg ctggttggcg aaccacgcca ttttacggct acgggcttta tcaaacatat
    25261 ggccaattaa caggcctaac actacgcccc aaaagccgcc gcccatcagt aaggccacgg
    25321 ccacgccaat gatttttccc caatactgca tatattcccc aaatcgacac acggatatca
    25381 gggctatctc ccacaatata aaggtgcttt taccgttttc cggctgcagt caattgtggg
    25441 acatcgccta taatttgcat tatcatacct gtcattcaat gccgtgccta acaccactga
    25501 cgctattcgg acaggattaa cactagcgta gagatgacga gtacgttagt ctctgaccgt
    25561 ttgtcacgcg caacgttacc gatgatggaa caataaaatc aacgtatgaa aaaacgtatc
    25621 cccactctcc tggccaccat gattgccacc gccctttata gtcaacaggg actggcagcc
    25681 gacctcgcct cacagtgcat gttgggcgtg ccaagctatg accgtcctct ggtacagggc
    25741 gataccaatg acttacccgt gactatcaat gctgaccacg cgaaagggga ctacccggat
    25801 gacgccgtgt ttactggcag cgtggatatc atgcagggta acagccgtct gcaggccgac
    25861 gaagtgcagc tccatcaaaa agaggcacca ggacaaccgg agccggtacg aaccgttgat
    25921 gcgctcggta atgtccatta cgacgataac caggtgatcc tcaaagggcc gaaaggctgg
    25981 gcgaatctga acaccaaaga taccaacgtc tgggaaggtg attaccagat ggtgggtcgc
    26041 cagggccgcg gtaaagcgga cctgatgaaa caacgtggtg aaaaccgcta taccattctg
    26101 gataacggta gctttacctc ctgtctgccg ggttctgaca cctggagcgt ggtaggtagc
    26161 gaaattattc atgaccgcga agaacaagtt gcggagatct ggaacgcccg ctttaaggtg
    26221 ggtccagtac cgatctttta tagcccctat ttgcagttgc cggtgggtga caaacgtcgc
    26281 tctggtttct tgatcccgaa cgccaagtac accaccacca actactttga gttctacctg
    26341 ccatattact ggaacatcgc gccaaatatg gatgccacca tcacgccgca ttatatgcat
    26401 cgtcgtggca acatcatgtg ggagaacgaa ttccgctacc tctcccaggc gggcgctggc
    26461 ttgatggaac tggactatct gccttcagat aaagtctatg aagatgaaca cccgaacgat
    26521 gacagttcac gtcgttggtt gttctactgg caacactccg gggtcatgga tcaagtgtgg
    26581 cgtttcaacg tagactacac caaggtcagc gatcctagct acttcaatga tttcgataac
    26641 aagtacggtt ccagtactga cggctacgca acgcaaaaat tcagcgttgg ctatgcggtg
    26701 caaaacttca atgccaccgt ttcaaccaag cagttccagg tctttagcga gcagaacacc
    26761 agtagctact cggcagagcc gcagttagac gttaactact accagaatga tgttggtccg
    26821 tttgatacgc gtatttacgg ccaggcagtg cactttgtta acaccagaga cgacatgcct
    26881 gaagcaaccc gtgttcacct ggaaccgacc atcaatttgc cgctctctaa taactggggc
    26941 agcatcaata ccgaagcgaa gttgctggca acccattatc agcaaaccaa tcttgactgg
    27001 tataactcca gaaacacgac caagctggac gaatccgtta accgcgttat gccgcaattc
    27061 aaagttgacg gcaaaatggt ctttgaacgc gatatggaaa tgctggctcc gggttatacc
    27121 caaacgctgg aaccgcgcgc gcagtatttg tacgtgccgt atcgcgatca gagcgacatc
    27181 tataactacg actcgtctct actgcaatct gactactctg gcctgttccg ggaccggact
    27241 tacggcggtc ttgaccgtat tgcctccgct aaccaggtga cgaccggtgt cacatctcgc
    27301 atatatgatg atgctgccgt tgaacatttt aatatttccg ttggtcaaat ctactatttc
    27361 acggagtctc gcactggcga tgacaacata acatgggaga atgacgacaa aacgggctca
    27421 ctggtgtggg caggcgatac ttactggcgt atctccgagc gttggggatt gcgtggcggg
    27481 attcagtacg atacacgtct ggataacgta gcgaccagta actccagcat tgaataccgt
    27541 cgggatgaag accgtctggt acagctgaat taccgttacg ccagcccgga atatattcag
    27601 gctacgctgc ctaagtacta ttccactgct gagcaatata agaatggtat ttcgcaggta
    27661 ggtgctgtcg ccagctggcc aattgccgat cgttggtcca ttgttggggc ctactactac
    27721 gacaccaatg cgaacaagca agccgactct atgttaggtg tgcaatacag ctcctgctgc
    27781 tatgcaattc gcgtcggtta cgagcggaag ctgaacggtt gggataacga taaacaacat
    27841 gcggtatatg acaacgcaat cggctttaac atcgaacttc gcggcctgag ctccaactac
    27901 ggtctgggta cgcaagagat gctgcgttcg aacattctgc cgtatcaaaa cactttgtga
    27961 tttgttgatt taccacgtaa tccgcagtgc ggttaattga aatggaaaaa gtatgaagaa
    28021 ctggaaaacg ctgcttctcg gtatcgccat gatcgcgaat accagtttcg ctgcccccca
    28081 ggtagtcgat aaagtcgcag ccgtcgtcaa taacggcgtc gtgctggaaa gcgacgttga
    28141 tggattaatg cagtcggtaa aactgaacgc tgcgcaggca aggcagcagc ttcctgatga
    28201 cgcgacgctg cgccaccaaa tcatggaacg tttgatcatg gatcaaatca tcctgcagat
    28261 ggggcagaaa atgggagtga aaatctccga tgagcagctg gatcaggcga ttgctaacat
    28321 cgcgaaacag aacaacatga cgctggatca gatgcgcagc cgtctggctt acgatggtct
    28381 gaactacaac acctatcgta accagatccg caaagagatg attatctctg aagtgcgtaa
    28441 caacgaggtg cgtcgtcgca tcaccatcct gccgcaggaa gtcgaatccc tggcgcagca
    28501 ggtgggtaac caaaacgacg ccagcactga gctgaacctg agccacatcc tgatcccgct
    28561 gccggaaaac ccgacttctg atcaggtgaa cgaagcggaa agccaggcgc gcgccattgt
    28621 cgatcaggcg cgtaacggcg ctgatttcgg taagctggcg attgctcatt ctgccgacca
    28681 gcaggcgctg aacggcggcc agatgggctg gggccgtatt caggagttgc cgggtatctt
    28741 cgcccaggca ttaagcaccg cgaagaaagg cgacattgtt ggcccgattc gttccggcgt
    28801 tggcttccat attctgaaag ttaacgacct gcgcggcgaa agcaaaaata tctcggtgac
    28861 cgaagttcat gctcgccata ttctgctgaa accgtcgccg atcatgactg acgaacaggc
    28921 ccgtgtgaaa ctggaacaga ttgctgccga tatcaagagt ggtaaaacga cttttgctgc
    28981 cgcagcgaaa gagttctctc aggatccagg ctctgctaac cagggcggtg atctcggctg
    29041 ggctacacca gatattttcg atccggcctt ccgtgacgcc ctgacccgcc tgaacaaagg
    29101 tcaaatgagt gcaccggttc actcttcatt cggctggcat ttaatcgaac tgctggatac
    29161 ccgtaatgtc gataaaaccg acgctgcgca gaaggatcgt gcataccgca tgctgatgaa
    29221 ccgtaagttc tcggaagaag cagcaagctg gatgcaggaa caacgcgcca gcgcctacgt
    29281 taaaatcctg agcaactaat ggttaaaacc caacgtgttg tgatcactcc cggcgagccc
    29341 gccgggattg gcccggactt agttgtccag cttgcacagc gtgagtggcc ggtcgaactg
    29401 gttgtttgtg ccgatgccac tctccttacc gaccgggcag cgatgctcgg tttgccgctc
    29461 accctccgcc cttattcccc caactcccct gcacaaccgc aaactgcggg cacattaacg
    29521 ctacttcctg tcgcgctacg cgaatctgtc actgcggggc agttagcgat tgaaaatggg
    29581 cattacgtgg tggagacgct ggcgcgagcg tgtgatggct gtctgaacgg tgaatttgct
    29641 gcgctgatca caggccccgt gcataaaggc gtcattaacg acgcaggtat tccgtttact
    29701 ggtcataccg agtttttcga agagcgctcg caggcgaaaa aagtggtgat gatgctggcg
    29761 accgaagaac ttcgcgtggc gctggcaacg acgcatttac cgctgcgcga tatcgcagat
    29821 gctatcaccc ctgcactttt gcacgaagtg attgctattt tgcatcacga tttgcgtaca
    29881 aaatttggta ttgccgaacc gcgcattctg gtctgcgggc tgaatccgca cgcgggcgaa
    29941 ggcggtcata tgggtacgga agagatagac accattattc cggtgctcga cgagctgcgg
    30001 gcgcagggga tgatactcaa cgggccgctg cctgccgata ccctgtttca gccgaaatat
    30061 ctcgataacg ccgacgccgt gctggcgatg taccacgatc agggtcttcc cgtgctaaaa
    30121 taccagggct tcgggcgcgg tgtgaacatt acgctgggcc tgccctttat tcgcacatca
    30181 gtggaccacg gcaccgcgct tgaactggcg ggacgtggcg aagccgatgt cggcagtttt
    30241 attacggcgc ttaatctcgc catcaaaatg attgttaaca cccaatgaat aatcgagtcc
    30301 accagggcca cttagcccgt aaacgcttcg ggcaaaactt tctcaacgat cagttcgtga
    30361 tcgacagcat tgtttctgcc attaacccgc aaaagggcca ggcaatggtc gaaatcggcc
    30421 ccggtctggc ggcattgacc gagccggtcg gcgaacgtct ggaccagctg acggtcatcg
    30481 aacttgaccg cgatctggcg gcacgtctgc aaacgcatcc attcttaggc ccgaaactga
    30541 cgatttatca gcaggatgcg atgaccttta actttggcga actggccgag aaaatgggtc
    30601 agccgctgcg tgttttcggc aacctgcctt ataacatctc cacgccgttg atgttccatc
    30661 tgtttagcta tactgatgcc attgccgaca tgcactttat gttgcaaaaa gaggtggtga
    30721 atcgtctggt tgcaggaccg aacagcaaag cgtatggtcg attaagcgtc atggcgcaat
    30781 actattgcaa cgtgatcccg gtactggaag ttccgccgtc agcctttaca ccaccaccca
    30841 aagtggattc cgccgtcgtg cgcctggttc ctcatgcaac gatgcctcac ccggttaaag
    30901 atgttcgtgt gttgagccgc atcaccaccg aagcctttaa ccagcgtcgt aaaaccattc
    30961 gtaacagcct cggcaacctg tttagcgtcg aggtgttaac gggaatgggg atcgacccgg
    31021 cgatgcgagc ggaaaatatc tctgtcgcgc aatattgcca gatggcgaac tatctggcgg
    31081 agaacgcgcc tttgcaggag agttaacgat gatcaattcg ccccgagtgt gtattcaggt
    31141 tcaaagcgtc tacattgagg cacaatcttc acctgataat gaacgttacg tttttgctta
    31201 taccgtaacc atacgcaatc tggggcgagc gccagtgcag ttgttggggc gttactggct
    31261 gatcaccaat ggcaatggcc gtgaaaccga agtccagggc gaaggagtgg ttggcgtcca
    31321 gccacttatc gcgcctggcg aagagtacca gtacaccagc ggtgcaatca ttgaaacccc
    31381 gctgggcacc atgcagggtc actacgaaat gatcgatgaa aatggcgtcc ctttcagcat
    31441 cgacattccc gtattccgac tcgccgttcc cacactcatt cattaaaaga atatggcgac
    31501 ataccttatt ggcgacgttc atggttgtta cgatgaactg atcgcattgc tgcataaagt
    31561 agaatttacc cctgggaaag ataccctctg gctgacgggc gatctggtcg cgcgcggccc
    31621 gggttcgctg gatgttctgc gctatgtgaa atccttaggc gacagcgtac gtctggtgct
    31681 gggcaatcac gatctgcatc tgctggcggt atttgccggg atcagccgca ataaaccgaa
    31741 agatcgcctg acaccgctgc tggaagcgcc ggatgccgac gagctgctta actggctgcg
    31801 tcgccagcct ttgctgcaaa tcgacgaaga gaaaaagttg gtgatggccc acgcagggat
    31861 cacgccgcag tgggatctac agaccgccaa agagtgcgcg cgcgatgtag aagcggtgct
    31921 atcgagtgac tcctatccct tctttctcga cgctatgtac ggcgatatgc caaataactg
    31981 gtcaccggaa ttgcgggggc tgggaagact gcgttttatc accaacgcct ttacccgtat
    32041 gcgtttttgc ttcccgaacg gtcaactgga tatgtacagc aaagaatcgc cggaagaggc
    32101 ccctgcccca ctgaaaccgt ggtttgcgat tcctggccct gtcgctgaag aatacagcat
    32161 cgcctttggt cactgggcat cgctggaggg caaaggtacg ccggaaggta tatacgcgct
    32221 ggataccggc tgctgctggg gtggtacatt aacctgcctg cgctgggaag ataaacagta
    32281 ttttgtccag ccgtcgaacc ggcataagga tttgggcgaa gcggcggcgt cttaaacaca
    32341 gcctgatata ggaaggccgg ataagacgcg accggcgtcg catccggcac tagccgtaaa
    32401 ttctatacaa aattaccgcc gctccagaat ctcaaagcaa tagctgtgag agttctgcgc
    32461 atcagcatcg tggaattcgc tgaataccga ttcccagtca tccggctcgt aatccgggaa
    32521 atgggtgtcg ccttccactt ctgcgtcgat atgcgtcaga tacagtttct gcgcttttgg
    32581 caggaactgc tcataaacgc gaccgccgcc aatcaccatg atttctggta cgtcaccaca
    32641 cgccgcgatg gcttcatcca ccgacttcac ccacgttacg cgatcgtccg tacccggttg
    32701 actgctgagg ataatatttt tgcgtcctgg caacggacga ccgattgatt cccaggtatg
    32761 gcggcccata atcacgggtt tatttaaggt gttgcgttta aaccaggcga gatcggcagg
    32821 caggttccac ggcatggcgt tttccatgcc gataacgcga tctaccgcta acgccgcaat
    32881 cagactgatc attgagattt cccgataaaa aaaattgtcg ccactatacg taaagcgtaa
    32941 accgtcgtcg actggtgcga ggatgatgtt gaggaaaatt ttatattctg ctggcgagtc
    33001 cacgctctct ccctggactc gccgcattac aatgaaacaa aaacaaacag ttagctgtaa
    33061 agtgtgattt atgtcactct ttattaggat gagggtttcg tttccggttc atccgccatg
    33121 ttgccggtat gtttaccttc ttcggttccc tgccagccat gtcgttgaat taatgacaga
    33181 tgttcgcggt cctcggtaat gatctcactt aacatcgcgc tggtgcgttt atagaccgcc
    33241 gcgcgggctt tggtgtcgtt ctcaaccatt gccatctctt ccaccatctg aatattaaag
    33301 cggcggaaca catcggcacg ttctcgcgct tcatacggcc ccagacctaa actttccagt
    33361 gccagacgcc cggttttcag cgcaccttcg aaggtttcac gctccggctt ttcaacgcct
    33421 gcctgacgca aacgaatgta gtggtcgaca tcgcgggcgc gggcaataat ctgcaaatgc
    33481 gggaagtgtt ctttcaccat ctctgtcagt tgcaggttgg tttgcggatc gtcgatggcg
    33541 ttaatcagca cttccgcttt cgccgctccc gcagattcca gtaaatccat ccgcgtggca
    33601 tcgccataaa acactttcat accaaattta cgcaaggttt cgatatggtc cggatcgtga
    33661 tcgagcacca ccattttcac cccgctggag agcagtaaac gtccggtgat ctgcccaaaa
    33721 cgaccgaatc cggcaatgat tacccgcggc tgttcttcgt cgatctcatc ggcttcacgc
    33781 gcctcttcag tagaagattg ctcaaggcga ttgaggatca ccagcagaat cggcgttgcc
    33841 gccatcgaca gcgccaccgc cagggtcagc gatttcgccc actccggctc cagcacattc
    33901 gccatctgcg ccgcgccaaa taccacaaag gcaaactcac tgccctgccc taacaacacc
    33961 gcaaaccaac gacgctgttt atttggcact tgcaacggtc gggcaatcag ccacagcatg
    34021 gcgattttga tgatgaggaa accgagcagc aaaatgacaa tgcgcaatgg gttttcaagc
    34081 agcgtgccaa agtctatcga catgccaaca ccgatgaaaa acagccccaa cagcaaacct
    34141 ttaaagggtt cgatatcgct ctccagcgca tgacggtatt ccgagcttgc cagcagtacg
    34201 cccgccagaa acgcgcccat cgccatcgac aagccgacct cttccagcag caaaccaaag
    34261 ccaaacacga ggaataacgc cacggcacta aacacttccc gcaagccaga gcgggctaca
    34321 aaacgcagcg ccggacgcgt gacatagcgc cccagcaata ccaccagcac cagcgcaccc
    34381 gccactttta acgccgagag agcaaatgcg cccatcgtcg tcgaggcact gctcgttgcc
    34441 agtagcggaa tcatcgccac cagcgggatc gccgcgatat cctggaacag cagcaccgca
    34501 aaggcactgc gacccatttg cgtcaccatc agattgcgtt cattcatcgc ctgcatggca
    34561 atcgccgtag aggagagcgc cagcgtcatg ccgatcaatt ccgcgacctg ccagcgcagc
    34621 ccaagtaaca tgcagaacag ccccagcagg ccgccgcaaa tcaccatctg caatgcgcca
    34681 ccgccgaaca ctgccgcacg cagcttccac agcctttgtg gatcgagttc gaggccgata
    34741 ataaacagca tcagcaccac cccaatctcg gcaaagtgca gaatagattc ggcatcggtc
    34801 accagtcgca gcccccacgg gccaataatg cagccggcga tcaggtagcc aagtaccgat
    34861 cccagaccaa gacgtaccgc aatgggtaca atcagcgctg ccgaaccgag ataaatcagc
    34921 gcctgaatca gcgtatggct atccatgatg ggcctcctgc cattccagca gacgttgctt
    34981 atagtgacgc gcctgccctt cgagggtttc gtcgtcacaa ataaaggtgc agtgcatggc
    35041 aaacggtggc agccagttca gcccgcagta gattgccgtc gcctgtagcg gctgcgacag
    35101 cacatcaaag cccggatgcg caccaatttc aaaatggctt tccccgccgc cggtcgtcac
    35161 cgcccacagc aaatgtttgc catgcagcgc cttgccgccg tgaccgtaag cccagccgtg
    35221 cgacaaaact ttatcgatcc aaagtttaag aagcggagga atgctgtacc actgcatcgg
    35281 atgctgccag acgatcagat cggcgcgaga cagcgcctcc tgctcggcgg caatatcgat
    35341 attgaagtca ggatagagtt gataaagaga gcgaatttcg acgccttcca gcgtccttgc
    35401 ctgttcaagc atccgtttat tcgcatggga atgatgcgga tacggatgcg cataaattat
    35461 aagaatcata ggtagcccgc gtgattacgc ctttgttttc ccacaaagtg tagtcatata
    35521 ttcacgcggc ttatagtcaa taatattgat tcagaaaaga gagaaatctg aacaatttac
    35581 cccattctct gcccgcggat cgtcatattg ctggtttgcg ccaatgacat ccctcgatgt
    35641 ctccggggca aacgctacgg aaatcaacaa gccaaacagc gagatacccg cccccattag
    35701 catcgtgtta ctgataccgt aattattgat aaagatcggc agtgcccagg tcgaaacaat
    35761 ggtgccaata cggcttaagg acataatcac gcccacggca gaggcgcgga tatctgtcgg
    35821 gaagagttca ttaggataga gccactgcaa attacccggc ccgccagaga aaaaggcata
    35881 caccgcaaag gccatcacta ccagccagat ccccatatcc gggatcagcc ccaaaaccgc
    35941 cagctccagc gtcatcatgg caaagctgcc aatcaacaat ggacgccgtc cggcagtgtt
    36001 taaccacagc atcggcggaa tacagccgag cataaagaac aggctaatca ccacgttccc
    36061 cagcgccgcg tttttgccaa cacccaatcc caacaaacca acgatttgcg ggccaaaggt
    36121 gtaaatggcg aacattggga tcacctggca ggtccagatg gcggcaacaa acagaacaaa
    36181 aggaaaatgg cggcgattaa acagatcgcg aaaacgggtt tgctgcggct gctcttcatc
    36241 gaaagccacc ggttcgccaa acagttttat catcatctct tcgcactctt ttactcgccc
    36301 tttgcgtaat aaccagcggg gagattcagg cagttcgaat cgaccaatca aaatcaacaa
    36361 acaggggatc gccgcgctac ccagcatcca gcgccagccg ccttccacat cataaagcca
    36421 gtagccgacc agatcggcgc aggtcgcgcc gacataccac atggcggcga taaagctgat
    36481 ggaaaatgcc cgctgacggg tactggagaa ctcggtgatc attgaggtgg cgatgggata
    36541 atcggcaccg atgacaatgc cgataagtac ccgcatcacc aacagttcga cgggggatga
    36601 aacaaacatc gtcgccaccg atatcacgcc gatggcgatg atatcaatga ggaacatttt
    36661 gcgccgtccg actttatcgg aaatatagcc aaacagcgat gtgccaacga acagcccggc
    36721 gagcgttccc gcgcccaaca agccaatcca gtcagcgtcc agttttagcg ccggagtcag
    36781 ttgctccagc gccacgccaa tcattaccag tacataacca tcca
//
LOCUS       DADMIB010000020        36530 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.020, whole genome shotgun sequence.
ACCESSION   DADMIB010000020 DADMIB010000000
VERSION     DADMIB010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36530
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.020"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            24..896
                     /locus_tag="JNZ89_000986"
     CDS             24..896
                     /locus_tag="JNZ89_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001381404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8934931.1"
                     /translation="MRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEEQIGYTLFT
                     RKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNTYPTIIFDQ
                     LISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELENLTISELPP
                     LRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGINPTIIYRPY
                     SFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSIRNHRYTAT
                     MLQHIAEDRDGTNH"
     gene            complement(893..2370)
                     /gene="scpC"
                     /locus_tag="JNZ89_000987"
                     /pseudo
     CDS             complement(893..2370)
                     /gene="scpC"
                     /locus_tag="JNZ89_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311817.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA:succinate CoA transferase"
     gene            complement(2394..3179)
                     /gene="scpB"
                     /locus_tag="JNZ89_000988"
     CDS             complement(2394..3179)
                     /gene="scpB"
                     /locus_tag="JNZ89_000988"
                     /EC_number="7.2.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA decarboxylase"
                     /protein_id="HAY8934932.1"
                     /translation="MSYQYVNVATINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLN
                     RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISM
                     VEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKEL
                     IFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGE
                     AHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH"
     gene            complement(3190..4185)
                     /gene="meaB"
                     /locus_tag="JNZ89_000989"
     CDS             complement(3190..4185)
                     /gene="meaB"
                     /locus_tag="JNZ89_000989"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HAY8934933.1"
                     /translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL
                     DAIMPYCGNTLRLGVTGTPSAGKRTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL
                     GDKIRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS
                     ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYE
                     SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIEFKTALTASGRLQQVRQQQSVE
                     WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD"
     gene            complement(4178..6322)
                     /gene="scpA"
                     /locus_tag="JNZ89_000990"
                     /pseudo
     CDS             complement(4178..6322)
                     /gene="scpA"
                     /locus_tag="JNZ89_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417392.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
     gene            complement(6526..7419)
                     /locus_tag="JNZ89_000991"
     CDS             complement(6526..7419)
                     /locus_tag="JNZ89_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator ArgP"
                     /protein_id="HAY8934934.1"
                     /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
                     MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
                     ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
                     ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC
                     HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES
                     RMMRKVTDALLDYGHKVLRQD"
     gene            7802..8461
                     /gene="rpiA"
                     /locus_tag="JNZ89_000992"
     CDS             7802..8461
                     /gene="rpiA"
                     /locus_tag="JNZ89_000992"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HAY8934935.1"
                     /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
                     QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
                     EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGV
                     VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
                     K"
     gene            8716..9948
                     /locus_tag="JNZ89_000993"
     CDS             8716..9948
                     /locus_tag="JNZ89_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-3-phosphoglycerate dehydrogenase"
                     /protein_id="HAY8934936.1"
                     /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD
                     EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF
                     NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
                     HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK
                     NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP
                     FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
                     HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK
                     ALQAMKAIPGTIRARLLY"
     gene            10177..10236
                     /gene="ibsC"
                     /locus_tag="JNZ89_000994"
     CDS             10177..10236
                     /gene="ibsC"
                     /locus_tag="JNZ89_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsC"
                     /protein_id="HAY8934937.1"
                     /translation="MMRLVIILIVLLLISFGAY"
     gene            10569..10628
                     /locus_tag="JNZ89_000995"
     CDS             10569..10628
                     /locus_tag="JNZ89_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY8934938.1"
                     /translation="MMRLAIILIVLLLISFPAY"
     gene            complement(10729..11331)
                     /locus_tag="JNZ89_000996"
     CDS             complement(10729..11331)
                     /locus_tag="JNZ89_000996"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HAY8934939.1"
                     /translation="MTQLPELPLTLSRQEIRKMIRQRRRALTPEQQQEMGQQAATRMM
                     TYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQ
                     SELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQ
                     HYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW"
     gene            complement(11352..11535)
                     /gene="ssrS"
                     /locus_tag="JNZ89_000997"
     ncRNA           complement(11352..11535)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="JNZ89_000997"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(11577..11906)
                     /gene="zapA"
                     /locus_tag="JNZ89_000998"
     CDS             complement(11577..11906)
                     /gene="zapA"
                     /locus_tag="JNZ89_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HAY8934940.1"
                     /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER
                     TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE
                     KTNQNFE"
     gene            12074..12652
                     /gene="ygfB"
                     /locus_tag="JNZ89_000999"
     CDS             12074..12652
                     /gene="ygfB"
                     /locus_tag="JNZ89_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YgfB"
                     /protein_id="HAY8934941.1"
                     /translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS
                     SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA
                     DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE
                     IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH"
     gene            12678..14003
                     /gene="pepP"
                     /locus_tag="JNZ89_001000"
     CDS             12678..14003
                     /gene="pepP"
                     /locus_tag="JNZ89_001000"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HAY8934942.1"
                     /translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPY
                     RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK
                     LGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADEIMNSALEKLRKGSRQNLTAP
                     ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHH
                     EFNRHGARYPSYNTIVGSGENGCILHYTENESELRDGDLVLIDAGCEYKGYAGDITRT
                     FPVNSKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKG
                     DVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD
                     AEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMAAARKQ"
     gene            14000..15178
                     /gene="ubiH"
                     /locus_tag="JNZ89_001001"
                     /gene_synonym="visB"
     CDS             14000..15178
                     /gene="ubiH"
                     /locus_tag="JNZ89_001001"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HAY8934943.1"
                     /translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG
                     FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL
                     GQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVA
                     ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG
                     RCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARA
                     ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQ
                     RRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR
                     "
     gene            15201..16403
                     /gene="ubiI"
                     /locus_tag="JNZ89_001002"
                     /gene_synonym="visC"
     CDS             15201..16403
                     /gene="ubiI"
                     /locus_tag="JNZ89_001002"
                     /gene_synonym="visC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent 2-octaprenylphenol hydroxylase"
                     /protein_id="HAY8934944.1"
                     /translation="MQCVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADA
                     PPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYS
                     HLGHIVENSVIHYALWNKAQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLV
                     IGADGANSWLRNKADISLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS
                     DPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYA
                     RQFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR
                     YERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL
                     NDLPEWLR"
     gene            complement(16477..16560)
                     /locus_tag="JNZ89_001003"
     CDS             complement(16477..16560)
                     /locus_tag="JNZ89_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934945.1"
                     /translation="MSKNTKSKNNDIRKYNAKTEVKLVYFK"
     gene            16850..17944
                     /gene="gcvT"
                     /locus_tag="JNZ89_001004"
     CDS             16850..17944
                     /gene="gcvT"
                     /locus_tag="JNZ89_001004"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HAY8934946.1"
                     /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA
                     GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVY
                     YFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF
                     NDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP
                     CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREH
                     GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI
                     GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
     gene            17968..18357
                     /gene="gcvH"
                     /locus_tag="JNZ89_001005"
     CDS             17968..18357
                     /gene="gcvH"
                     /locus_tag="JNZ89_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HAY8934947.1"
                     /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
                     LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
                     FKIKASDESELESLLDATAYEALLEDE"
     gene            18476..21349
                     /gene="gcvP"
                     /locus_tag="JNZ89_001006"
     CDS             18476..21349
                     /gene="gcvP"
                     /locus_tag="JNZ89_001006"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000195053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HAY8934948.1"
                     /translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ
                     IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNM
                     LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
                     AKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ
                     QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP
                     MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
                     CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
                     VEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEID
                     TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
                     LGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC
                     MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
                     DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
                     ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
                     QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD
                     AFPVLYTGRDGRVAHECILDIRPLKEETSISELDIAKRLIDYGFHAPTMSFPVAGTLM
                     VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP
                     YSREVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYL"
     gene            21615..22358
                     /locus_tag="JNZ89_001007"
                     /pseudo
     CDS             21615..22358
                     /locus_tag="JNZ89_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417378.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            complement(22415..23848)
                     /locus_tag="JNZ89_001008"
     CDS             complement(22415..23848)
                     /locus_tag="JNZ89_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY8934949.1"
                     /translation="MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHG
                     VPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEA
                     QPNEEGLKFYDSLFDELLKYNIEPVITLSHFEIPLHLVQQYGSWTNRKVVDFFVRFAE
                     VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHDNPEETMYQVLHHQFV
                     ASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGY
                     YPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMINAVKAEGGTGDAISGFE
                     GSVPNPYVKASDWGWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSIND
                     DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDD
                     GTGDMSRSRKKSFNWYKEVIASNGEKL"
     gene            23893..24204
                     /locus_tag="JNZ89_001009"
     CDS             23893..24204
                     /locus_tag="JNZ89_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HAY8934950.1"
                     /translation="MQPNDITFSQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRF
                     EDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKC
                     L"
     gene            24368..25027
                     /locus_tag="JNZ89_001010"
     CDS             24368..25027
                     /locus_tag="JNZ89_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HAY8934951.1"
                     /translation="MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDL
                     NASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPF
                     LLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMA
                     VKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSMCHFLAIYLYIGQ
                     A"
     gene            complement(25223..26203)
                     /gene="ygfZ"
                     /locus_tag="JNZ89_001011"
     CDS             complement(25223..26203)
                     /gene="ygfZ"
                     /locus_tag="JNZ89_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HAY8934952.1"
                     /translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ
                     VTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA
                     VFSKVTIAADDERVLLGVAGFQARAALANLFSELPSREKQVVKEGATTLLWFEHPAER
                     FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA
                     LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRT
                     GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE"
     gene            26446..26712
                     /gene="sdhE"
                     /locus_tag="JNZ89_001012"
     CDS             26446..26712
                     /gene="sdhE"
                     /locus_tag="JNZ89_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD assembly factor SdhE"
                     /protein_id="HAY8934953.1"
                     /translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI
                     RLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI"
     gene            26693..27100
                     /locus_tag="JNZ89_001013"
     CDS             26693..27100
                     /locus_tag="JNZ89_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin CptA"
                     /protein_id="HAY8934954.1"
                     /translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV
                     LLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD
                     GGKRQHLWLAADSMDEAEWRDLRRILLQQETQR"
     gene            complement(27140..27661)
                     /gene="fldB"
                     /locus_tag="JNZ89_001014"
     CDS             complement(27140..27661)
                     /gene="fldB"
                     /locus_tag="JNZ89_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldB"
                     /protein_id="HAY8934955.1"
                     /translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME
                     QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALG
                     MLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW
                     CEQILNEMAEHYA"
     gene            27773..28669
                     /gene="xerD"
                     /locus_tag="JNZ89_001015"
     CDS             27773..28669
                     /gene="xerD"
                     /locus_tag="JNZ89_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HAY8934956.1"
                     /translation="MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG
                     LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS
                     PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
                     SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
                     TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
                     QIYTHVATERLRQLHQQHHPRA"
     gene            28694..29404
                     /gene="dsbC"
                     /locus_tag="JNZ89_001016"
     CDS             28694..29404
                     /gene="dsbC"
                     /locus_tag="JNZ89_001016"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000715205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HAY8934957.1"
                     /translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV
                     AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGAAPVNVTNKMLLKQLNALEKEMIVYK
                     APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLESQAEQQMKAIW
                     CAKDKNKAFDDVMAGKAATPASCDIDIADHYALGVQLGVSGTPAIVLSNGTLVPGYQP
                     PKEMKEFLDEHQKMTSGN"
     gene            29410..31143
                     /gene="recJ"
                     /locus_tag="JNZ89_001017"
     CDS             29410..31143
                     /gene="recJ"
                     /locus_tag="JNZ89_001017"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HAY8934958.1"
                     /translation="MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERS
                     VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSN
                     IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD
                     HHLPGETLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIA
                     IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ
                     KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ
                     GMQIEALTLCEKLERSRDTLPGGLAMYHSEWHQGVVGILASRIKERFHRPVIAFAPAG
                     DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG
                     ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ
                     QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS
                     LQIIIDNIWPI"
     gene            31234..32332
                     /gene="prfB"
                     /locus_tag="JNZ89_001018"
     CDS             join(31234..31308,31310..32332)
                     /gene="prfB"
                     /locus_tag="JNZ89_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311790.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HAY8934959.1"
                     /translation="MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQP
                     DVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAE
                     LDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG
                     FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS
                     SAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN
                     DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DLRTGVETRNTQAVLDGSLDQFIEASLKAGL"
     gene            32342..33859
                     /gene="lysS"
                     /locus_tag="JNZ89_001019"
     CDS             32342..33859
                     /gene="lysS"
                     /locus_tag="JNZ89_001019"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HAY8934960.1"
                     /translation="MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH
                     TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA
                     AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK
                     KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITE
                     YPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG
                     DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
     gene            complement(33902..34450)
                     /gene="idi"
                     /locus_tag="JNZ89_001020"
     CDS             complement(33902..34450)
                     /gene="idi"
                     /locus_tag="JNZ89_001020"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HAY8934961.1"
                     /translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKG
                     QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDF
                     RYRATDPNGIVENEVCPVFAARTNSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP
                     WMVMQAANSEARKLLSAFAQHN"
     gene            34505..34576
                     /locus_tag="JNZ89_001021"
     CDS             34505..34576
                     /locus_tag="JNZ89_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934962.1"
                     /translation="MINQVSVYRQPPVLSGCRQVKTI"
     gene            complement(34573..34698)
                     /locus_tag="JNZ89_001022"
     CDS             complement(34573..34698)
                     /locus_tag="JNZ89_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8934963.1"
                     /translation="MNLLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF"
     gene            complement(34700..36148)
                     /locus_tag="JNZ89_001023"
     CDS             complement(34700..36148)
                     /locus_tag="JNZ89_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417364.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HAY8934964.1"
                     /translation="MSAIDSQLLSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAG
                     AVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFA
                     AVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSVGL
                     SIIQVGIDWAAGGKGNPQYGNPVYSGISFAVLIFILLITRYAKGFMSNVAVLLGIVFG
                     FLLSWMMNEVNLSGLHDALWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFL
                     ALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVC
                     ISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYN
                     LYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHAD
                     LVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE"
BASE COUNT         8796 a         9196 c         9768 g         8770 t
ORIGIN      
        1 tggacatttt tatttcgaaa aagatgcgca atttcatttt attagcgcaa accaataata
       61 ttgcccgggc ggcagaaaaa atccatatga cggcttcgcc atttggtaaa agcattgccg
      121 cgctggaaga acaaattggc tatacgctat ttacccgcaa agataataat atcagcctca
      181 ataaagccgg tcaggaactg tatcaaaaac tgttcccggt ttatcaacga ctttctgcga
      241 ttgataatga aatccataac tcagggcgtc gttcacgaga aattgtgatt ggcatagata
      301 atacttatcc gacaattatt ttcgatcagt tgattagtct cggagataag tatgaaggcg
      361 tgaccgccca gccagttgag ttcagcgaaa acggcgttat cgataatctt tttgaccgtc
      421 agttagattt tattatctcc ccacagcatg tatctgcacg agttcaggaa ctggaaaacc
      481 tgactatcag tgaattacca ccgctgcgat tgggctttct cgtttctcgc cgttatgaag
      541 agcgtcaaga gcaagagctg cttcaggagc tgccctggct acaaatgcgc tttcaaaacc
      601 gggctaactt cgaagcaatg attgatgcga atatgcgacc ttgtgggatc aatcccacca
      661 ttatttatcg tccctacagt tttatggcca aaatcagcgc cgtggagcgc ggacattttc
      721 tgacggtgat cccgcatttt gcctggcgac tggtgaatcc ggcaacgctg aaatattttg
      781 atgcgccgca caggccgatg tatatgcagg aatatcttta ttcaatcaga aatcatcgtt
      841 ataccgccac gatgcttcag catattgctg aagatcgtga cgggacaaac cattaaccca
      901 gcatcgagcc ggttgcaatt aaattacggt gtaagtcgaa gacgtggcta agatcgtggt
      961 gaatatgtcc gccgggcgca ttttccagat agcgatgcag ataatcccga tacataggat
     1021 gtgcacaatt atcaatgata gtgcgggcgc gttgaagcgg ggaaagaccg cgcagatcgg
     1081 cgatcccttg ttcggtgatg atcactttga cgctgtgttc gctgtgatca acatggctgc
     1141 acattggcac gacggttgag atcttgcctt ctttagcaat cgacggagcc ataaagatcg
     1201 acagatacgc gttgcgttca aaatcaccgc tgccgccgat gccgttcatc agatcgaccc
     1261 cggctacgtg cgttgaattt gcatgcccgt aaatatcaaa ctccaggccg acgttcagag
     1321 cgatgacgcc cagacgacgg atgatttccg ggttattgga aatctcctgc ggacgcaaca
     1381 caatgcggct ggcaaagtaa tccatattgt cgtaaatctt gcgcagggaa tcggccgaga
     1441 ttgtcaggct ggaggcgctg gccccgctga ttttgtcggt ttccagtaaa tgcaccaccg
     1501 attcctgtag cacttccgaa tacatcatga acggaggaat ttccgggttt tcccccagac
     1561 gcgccattac cgcattattg atattgccca cgccactttg cagcggcaga aattccggcg
     1621 gaatacgcca tgcgccattt cctgcaataa gaacgtgacc acgttatcgg caatctgctg
     1681 gcacatggga ttttgcttat ccagcatatt accggcgtcg ggcaagttgg tttccacgac
     1741 ggcgacaatc tttttcggat cgatttgcac atagcgggta ccgacgcgat ccattgcatg
     1801 gaagatcgac acgctattgc gccgcggtgg cgcgccagga atcacaatat ctgccagttc
     1861 tgcaacgcgc ggatcgtgat agtgattaag ttcaatgatc actttcttcg ctcgcagcag
     1921 ccaggtcggc gcattaccga tcccgctggt taaccagact cgaccatccg gtgccagtgc
     1981 cgatgcttca atgacggcaa catcaatgtc gccgaagaaa ccgtaattga ccatttgcgc
     2041 cacttcgctc aaatgcaggt caacgaaact caccgcgccc tgattgatct ttttacgtaa
     2101 accggacgat gtttgatatg gcgcacgcca ggaaacagca tcggcgtcag aaagtacatc
     2161 gtcagcggcg gcgctgattg acgcccccgt cagcaggcga atttgatacg gctttttggc
     2221 ctcatgctgt tcgttagctc tgcgggcaat cgcggtgggt agggctttcg gcgaacccgc
     2281 cggggtaaag ccgctaaatg ccaccatgtc gttatgctgg ataatttctg ccgcttcatc
     2341 ggcggtcatc cttgtccact gagtttccat ttttactcct tcgttcgcag ggattaatga
     2401 ccaacgaaat taggtttacg tttttcgagg aaagcgttca ttccttcctg gtaatcttcg
     2461 ctgtcataaa ccgcgcgtcg catcccctga atacgttcaa attcatcgga gttcatggtg
     2521 tgcgcttcgc ccagtacacg cagctcttct ttgataacag caatggctaa cggcgctttc
     2581 tcagagatgt ggtgcgccat ttgtaaggtg aaatcttcca gttcttccac ttccacaaca
     2641 tggttgagga tgccgacagc cagcgcgcgc tgggcggtga ttggcgaagc ggtaaaaatc
     2701 agctctttga caatgtggaa gcccgcgtcg cgggtcaggt tgtgaatgcc gaccaggtta
     2761 tacgggacgc cgaggtttac aggcgtcatt gagaaggttg aggtactggc ggcgatgatc
     2821 agatcggaac tcatgatcat ttcaaatgcg ccaccccaaa cactaccttc caccatcgaa
     2881 atgatcggtt tcgggaattt ttggatcatg cgggtgattt gacgcaatgg atcatcatag
     2941 gagagcggat cgcgaccgcc agacggcagt tcgtgaatat cgtgacctgc ggagaagact
     3001 ttggatccac tcggcgcgcg caaaatgata cagcgaattt ccggccggtt gagatcgctt
     3061 aacgcctgca taagatcatc aataaagact ttacttaagg cattaagttt tcggccatag
     3121 ttaaactcaa tgaccgccac tttgttgata gtggcaacgt tcacatactg ataagacata
     3181 aaaattcctt taatcaaaat attgcgtctg gataaattca ctgagctgcc gcaggccggt
     3241 gcgcggtgag agcgtattgt ttttgaccgc taaaagcgtc tggcggtaat agcgatcgaa
     3301 atcttcattc gcgaacaggt gattcagtac ttcttcttcg gtctgcttac gcagccattc
     3361 caccgattgt tgttgccgca cttgttgtaa acgaccactg gcagttagcg cggttttgaa
     3421 ctcgatgatg gcgtgccaga tctcatcgat tccacgtttt tccagtgcgc tacaagtcag
     3481 aacccgtggc tgccattcgt cgtatttacg tcgcagaata tgcagggcac tctcgtacat
     3541 atgccgggca atggcgacat tggtatggtt atcgccatcg tctttgttga taacgatcag
     3601 atcagccact tccatcagcc cttttttaat gccctgcaga tcatcgccgc caccggcaat
     3661 ttgcaacgag ataaaacagt ccaccatgcg ggcgacttct gtttccgact gcccgacgcc
     3721 aaccgtttcg acaatcacta cgtcataacc cgccgcttcg cataacagca ttaattcccg
     3781 cgctcgctga ctggcaccgc ccagatgacc ggaggatggt accgggcgaa taaacgccgc
     3841 ttcggcacgc gccaggtcat tcatgcggat tttatccccg agaatgctac cgccagtgac
     3901 cgggctgctg ggatcgaccg caataaccgc gacctttaat ccctctcgaa tcaacaacat
     3961 gccaaaggcc tcaagaaagg ttcttttccc cgcgctgggg gtgccggtaa cgcccagtcg
     4021 cagggtgtta ccgcagtacg gcataatggc atcaagcagc tgcgtactta gtgcctgatg
     4081 acgcgggtga cggctttcca ccagcgtcat ggcctgggcg agtgtggcac gctcaccctg
     4141 acgtaagcgg cgaatacttt ctgccagcgt ggcttcatta atcatgatgc tggcttatca
     4201 gattcagtac gtcgcgcaca ctgtcgagca taggtgtacc tggaccataa atcgccgcca
     4261 cgccgcgctc ttgcaggaag gcgtaatcct gcggtggaat gacgccaccg gcgactacgc
     4321 agatatcttc gcgtccccat tttttcagcg cctcgaccag ttccgggatc agcgttttat
     4381 gaccggcagc cagtgaggat gcgcccacta cgtgaacgtc attttctact gccaggcggg
     4441 cgatctcttc aggtgtagag aacatcgggc ttaaatctac gtcgaaaccg agatcggaat
     4501 aggcgctggc gatcactttc gagccacgat cgtgcccatc ctggcccatt ttggcgatca
     4561 gaatgcgcag gcgacgacca ttgtcggcaa ggaactgctc cgtttgcgca acaatggcat
     4621 cgaactcgga ggccgatttc tcagattgat gatagctttg cgcaatcacg ccggtaacac
     4681 actggcttgg caccagataa cggtcgaaag cggcttccag cgcatcggaa atttcaccca
     4741 gggtggcgcg aacgcgagcg gcattaacag cggcagccag caggttttcg ttatgctgtg
     4801 cggcgtgagt cagggcgttc aacgcggcgg ttacggcggc atcatcacgg gtggcgcgaa
     4861 tgcgttccag cgaagcaatt tgctcgttac gcaccatcac gttgtcgatc tcaagtacat
     4921 cggtttcgtc ttcgtgatcc agtttgtact tgttgacacc aacgatgaca cgtttgccct
     4981 ggtcgataag cgactgttcg cgcgctgagg cctattcgat cattcgtttt ggcagacctg
     5041 cttcgatcgc tttcgccata ccaccggctt cgtcgatctg ttggataata gctctggctt
     5101 gtttgacgat ttgatcggtc agcgactcaa tgtaatagga tccggccagt ggatcgacgg
     5161 tgcggcagag ttctgattct tcctggatga tgatctgggt gttgcgggca atgcgtgctg
     5221 agaaatcggt aggcaaacca agcgcttcgt caaaggcgtt ggtatgcagt gactgagtac
     5281 cgcccagcgt cgcagccagt gcttcaatgg tggtgcggat aacgttgtta tacggatcct
     5341 gttcagtcag gctccagcct gaggtctggc agtgggtacg cagcgccagt gatttcgggt
     5401 cctgtgcgcc aaatccactg accgcttcgc tccataaata acgtgccgca cgcaacatgg
     5461 cgacgttcat aaacagatcc atgccgatgc cgaagaagaa cgacaggcga ggagcgaagt
     5521 catcaatttt cagtccggca gagattgctg ctttgatgta ctcaatccca tcagcgagcg
     5581 taaatgctac ctgctgcacg cagttggcac ccgcttcacc catgtggtaa ccgctgatac
     5641 tgatggtatt aaatcgcggc atgttgccgg aacaccaggc gatgatgtcg gcgataatgc
     5701 gcattgacgg ttttggcggg taaatatagg tgttgcggca gaggtactct ttgaggatat
     5761 cgttctgaat ggtgccggtc agtttatcag gtgtaacacc ttgctcttcc gcggcgacga
     5821 tataaaacgc cagtactggt agcactgcgc cattcatggt catcgaaacc gacattttat
     5881 ccagcgggat ctggtcgaac aggactttca tatcttccac ggtgtcgata gcgacgcccg
     5941 ctttgccgac gtcgcccgcc acgcgcgggt tatcggagtc gtagcctcgg tgggtggcaa
     6001 ggtcaaacgc aacggaaaga cctttttgcc cggcggccag gttacggcga taaaaagcgt
     6061 tggactcttt tgctgttgaa aaaccagcat actgacggat ggtccacggt tgggcggtat
     6121 acatagtggc acgcgggcca cgaacgtagg gcggcaaacc aggaagggta cctgtcacct
     6181 ccagattatc gagatcggct tcggtataca gcggcttgat ggtgatccct tccgcggttt
     6241 gctgaaccag cgagtcgaca gttttctccc gacggctcaa ttccttgttg gcaagctgtt
     6301 gccactcctg cacgttagac attatttgct ccgtaaaacg caatcaaaat gagggtattt
     6361 gcgcctacgg tgagcttttt acgtgggttt gtcgccagca aaaaaaatgc attcagacgt
     6421 cgttttttgc cgcctgagat ttgtctattt tgtgatgtga ttcaaggaat acaaaaagaa
     6481 gtgaggacaa cgcctgatat gtgctatcag gcattatttg atggattaat cctgacgaag
     6541 gactttgtga ccataatcga gcaacgcatc agtgacttta cgcatcatgc ggctttcagg
     6601 agcaaagcgg tgccagtaga gcatccggcg ttgaaatagc cctggcgtta agtcaatcag
     6661 ttcaccgctg gctagttctt tctcgatttg caggtgcggg atcatacagc aggtggtgcc
     6721 ctggcgagca agttgcacga acgcttctga agaattaacg atatggcagg gcacgctgcc
     6781 tggaggcaga tcgaagtttt gctgcaaaaa ggcctggtgc atatcgtcaa gatggtcaaa
     6841 ggcgaccaca ggtgctttca ataatgccga acgcgttacg ccgttaggga aatatttttc
     6901 ggcaaacggt tttgagctga cgaacagata gtcaagcgca ccgagcttat cgacaaggca
     6961 actcggcagc gcctgatgtt gaatactcac cgcgccgacc acttcgccgc ggcgcagacg
     7021 ttcctgagta cgggtttcat cttctacctg caagttgagg cggataggcg aatcagccaa
     7081 tacaggagcc agtgccggaa gcaaccacgt cgccagactg tcggcgttga ccgccagtga
     7141 aagcagcagc ggagtcgaac cggtttgttc atcgcccagc cactcttctt ccagcaactc
     7201 cacctggcgc agcagtgcca gcagtttttg cccttgttcc gtcgggcgcg gcggtacggt
     7261 acgcaccaac agcggctgcc cgaacatatt ttccagttgc ttaatgcgct gtgagacggc
     7321 tgattgtgta atgcacagct tttgtgccgc gcgctcaaat cctcgttcac gtatcaccgc
     7381 atccagtgcc tgtaatgttc tgtagtccgg gcgtttcatt gctgttgtct gctcctggta
     7441 aatgcttttt cctgcactat gacacaattt tgtgtcaggt tgcatatacc gcagccgtcg
     7501 gcgggtaaca tttgtatcaa tggttaaacg cgcagcttaa aagatcaggg atttgcgcta
     7561 ttgcatttcg cttagcgact tcgcgccctg gttatgttga atggcgtggc gttattgcct
     7621 ctgttcgcac cgtggagcgg catacccaga ccgttgtatg ctttatttgc ggggcgaaag
     7681 gggatgcccg ccattgcgcg atattttatg gatgagttaa ccacccggct tgccaacggg
     7741 gtctgaatcg ctttttttgt atataatgcg tgtgaaattt cataccacag gcgaaacgat
     7801 catgacgcag gatgaattga aaaaagcagt aggatgggcg gcacttcagt atgttcagcc
     7861 cggcaccatt gttggtgtag gtacaggttc caccgccgca cactttattg acgcgctcgg
     7921 cacgatgaaa ggccagattg aaggggccgt ttccagttca gatgcttcca ctgaaaaact
     7981 gaaaagcctc ggcattcacg tttttgatct caacgaagtc gacagccttg gcatctacgt
     8041 tgatggcgca gatgaaatca acggccacat gcaaatgatc aaaggcggcg gcgcggcgct
     8101 gacccgtgaa aaaatcattg cttcggttgc ggaaaaattt atctgtattg ccgacgcctc
     8161 caagcaggtt gatattctgg gtaaattccc gctgccagta gaagttatcc cgatggcacg
     8221 tagtgcagtg gcgcgccagc tggtgaaact gggcggtcgt ccggaatacc gtcagggcgt
     8281 ggtgaccgat aatggcaacg tgatcctcga cgtccacggc atggaaatcc ttgacccgat
     8341 agcgatggaa aacgccataa atgcgattcc tggcgtggtg actgttggct tgtttgctaa
     8401 ccgtggcgcg gacgttgcgc tgattggcac acctgacggt gtcaaaacca ttgtgaaatg
     8461 atctgacggg ggaacctccc ccgttaaaaa aattctcttc attaaatttg gtgacatgtg
     8521 tcacgttttt acctggctat tgtcgattgc tctaaataaa tcctctaaac cagcatattc
     8581 aaccaagaaa tacctttgcg tgatatttcc tcaacatcgc gacgcaaacg ttcatattgc
     8641 cgcaatatta ttttttgata tgttgaaagg cggatgcaaa tccgcacaca acatttcaaa
     8701 gacaggattg ggtaaatggc aaaggtatcg ctggagaaag acaagattaa gtttctgctg
     8761 gtagaaggcg tgcaccaaaa ggcgctggaa agccttcgtg cagctggtta caccaacatc
     8821 gaatttcaca aaggcgcgct ggatgatgaa caattaaaag aatccatccg cgatgcccac
     8881 ttcatcggcc tgcgatcccg tacccatctg actgaagacg tgatcaacgc cgcagaaaag
     8941 ctggtcgcta ttggctgttt ctgtatagga acaaaccagg ttgatctgga tgcggcggca
     9001 aagcgcggga tcccggtatt taacgcaccg ttctcaaata cgcgctctgt tgcggagctg
     9061 gtgattggcg aactgctgct gctattgcgc ggcgtgccgg aagccaatgc taaagcgcac
     9121 cgtggcgtgt ggaacaaact ggcggcgggt tcttttgaag cgcgcggcaa aaagctgggt
     9181 atcatcggct acggtcatat tggtacgcaa ttgggcattc tggctgaatc gctgggaatg
     9241 tatgtttact tttatgatat tgaaaataaa ctgccgctgg gcaacgccac tcaggtacag
     9301 catctttctg acctgctgaa tatgagcgat gtggtgagtc tgcatgtacc agagaatccg
     9361 tccaccaaaa atatgatggg cgcgaaagaa atttcactaa tgaagcccgg ctcgctgctg
     9421 attaatgctt cgcgcggtac tgtggtggat attccggcgc tgtgtgatgc gctggcgagc
     9481 aaacatctgg cgggggcggc aatcgacgta ttcccgacgg aaccggcgac caatagcgat
     9541 ccatttacct ctccactgtg tgaattcgac aacgtacttc tgacgccaca cattggcggt
     9601 tcgactcagg aagcgcagga gaatatcggc ctggaagttg cgggtaaatt gatcaagtat
     9661 tctgacaatg gctcaacgct ctctgcggtg aacttcccgg aagtctcgct gccactgcat
     9721 ggtggtcgtc gtctgatgca catccacgaa aaccgtccgg gcgtgctaac tgcgctgaac
     9781 aaaatcttcg ccgagcaggg cgtcaacatc gccgcgcaat atctacaaac ttccgcccag
     9841 atgggttatg tagttattga tattgaagct gacgaagacg ttgccgaaaa agcgctgcag
     9901 gcaatgaaag ctattccggg taccattcgc gcccgtctgc tgtactaatt ccccttctct
     9961 gaaaattaac gggcaggtca ctgacttgcc cgttttttta tcccttctcc acaccgttgc
    10021 cgcgttgcgc attctacttt gcgagtctgc tccagaaaat aaatcaaagt cagatcaatg
    10081 cgttgtgttt atttaatggg gatttacgat ggcgggacag tatggggctg taacggtaaa
    10141 gccctcaccg aagcgagggc ttaaaggaga agggttatga tgcgacttgt catcatactg
    10201 attgtactgt tactgataag tttcggagct tattaacagt cagtctctgg ggaggagtca
    10261 tcctccctta cccttactca ctaaattagg tcaaagaatc aacgatgtca atcagggcga
    10321 tgcggggtgc atcgccctga accgaacttt ttgatagcca cttcatcgcc cacgtttact
    10381 gccgtaatag atcctttttc ccaaaaatta tctctgtttt gcatggggtt tttcgaacac
    10441 gctcgaagaa aagatttaaa ggtagatcaa tgcgttgtgg ttatttaaag agagcttacg
    10501 atagctgggc agcatggggc tgtaacggta aagccctcac cgaagcgagg gcttgaagga
    10561 gaagggttat gatgcgactt gccatcatac tgattgtact gttactcata agtttcccag
    10621 cttattaaca gtcagtcaca ggggaggagc aatcctccct tacccttact cactaaatta
    10681 ggttaaagaa tcaacgatgt caatcagggc gatgcaggtg tatcgccctt accactccca
    10741 gactttcgac ggtgtaacca ccgcaggaag agggatatcc cactcttcaa cggggagttt
    10801 ttccaccaac tgacaatcat gcgcataacc caccggttgc gttttatagt gctgccagtt
    10861 ttgtaaggtc cgatcataaa aaccaccgcc cattcccagg cgctgaccgt actcatcaaa
    10921 ggcgaccagc ggtgtgatca gcacgtctaa tcgggaaagg ggtagcacgt cacgcacatc
    10981 cagttttggc tcatggattt tcaacctgtt catcaccagt tcgctttgcg gatggtaatt
    11041 caggaacagc aaattaccag cactaaaggg atgcaaaact ggaagatata cgcgcttacc
    11101 ggcgcgccag agttgttcta ttagcggctg ggtgtcgagt tcaccatcaa aagagaggaa
    11161 tacagcgacc gtatgcgcca tcaccaccgg gggataagtc atcatccggg tagcggcttg
    11221 ttgacccatt tcctgctgtt gttccggcgt taacgcacga cgacgttgcc gaatcatttt
    11281 gcggatttct tgtcgggata atgtcagtgg gagttctggt agttgcgtca tggctggtgc
    11341 cagataagaa gggaatctcc gagatgccgc cgcaggctgt aacccttgaa cccttggttc
    11401 aaggtgaatg tgtcgtcgca gttttaaggc ttctcggacg gaccgagcat gctcaccaac
    11461 cgcggagcgc cacattcttg tggtatgaaa tatcggctca ggggactggc ccgcttgcga
    11521 acatctcaga gaaattttgt cttcacggtt actctaccac agtaaaccga aaagtgtcat
    11581 tcaaagtttt ggttagtttt ttcggtgatg cgaccttgtt caagtaacgc ttgttctatg
    11641 gtctgctgca gcatccgaat acgctgttcc atacttgccg cgtagtcacg agtcttcgct
    11701 ttttcttgcg ctaactcata gctgatattc aatgcggcaa tgaagaccaa ctgttcagta
    11761 tttgtgactc tagtgcgttc tttcagatct tgcaaccgtt ggttcagatc gtccgctgcc
    11821 tgattcaacg catccctttg gtcaggcggg cagttcacac gcagtgaacg gccaaaaatt
    11881 tggatatcga cgggttgtgc agacatgcca ccttcctgct gattgactgc gctgccttcg
    11941 tctttagacc catggtctgc gaaggggcga cactatagct accctgatga gaagagacaa
    12001 gcccttttct ggtccaccag ggcccaaagt ggtagcatat catgaatatt cctccctttg
    12061 acgacgaatg cttatgtcta tacagaacga aatgcctggt tacaacgaaa tgaaccagta
    12121 tctgaaccaa caagggacgg gtctgacccc tgccgagatg catggtttaa tcagtgggat
    12181 gatatgtggc ggtaacgatg acagctcatg gctgccgcta cttcacgacc tgacgaacga
    12241 aggcatggct ttcggtcatg agctggcaca ggcactgcgt aaaatgcact ctgccaccag
    12301 cgatgccctg caggatgacg gcttcctttt tcagctttat ctgcctgatg gcgatgatgt
    12361 cagcgttttc gatcgggctg atgcattggc aggttgggtc aatcacttcc tgcttggtct
    12421 tggcgttacg caaccgaagc tggataaagt gaccggcgaa accggtgaag ctatcgacga
    12481 tctgcgtaac attgcgcaac tgggttacga cgaagacgaa gatcaggaag agcttgaaat
    12541 gtcgcttgaa gagatcatcg aatacgttcg tgttgccgcg ctgttatgcc acgacacctt
    12601 tactcatccg caaccgaccg cgccagaagt acaaaaaccg actctacact aaaaacaaaa
    12661 aacgtaagga gagtgttatg agtgagatat cccggcaaga gtttcagcgt cgccgtcagg
    12721 ccctggtgga gcaaatgcaa cccggcagcg ccgcgctgat ttttgctgca ccagaagtaa
    12781 cacgtagcgc cgacagcgaa tacccctatc gtcagaacag tgacttctgg tacttcaccg
    12841 gctttaacga accggaagcg gtgctggtgc tgattaaaag cgatgacact cataaccaca
    12901 gcgttctgtt taaccgcgtt cgcgacctga cggcggagat ctggtttggc cgtcgcttag
    12961 gccaggatgc cgcgccagag aaactgggcg ttgaccgcgc actggcattc agcgaaatca
    13021 atcagcaact ttatcaacta cttaacggcc tggatgtggt ttaccatgcc cagggcgaat
    13081 atgcatatgc tgatgaaatc atgaacagtg cgctggaaaa actgcgtaaa ggttcgcggc
    13141 aaaatctcac cgcaccggca acgatgatcg actggcgtcc tgttgttcat gaaatgcgcc
    13201 tgttcaaatc gccagaagag attgccgtac tccgccgcgc gggagaaatc accgccatgg
    13261 cacatacacg ggcgatggaa aaatgccgtc cgggaatgtt cgagtaccat ctggaaggcg
    13321 aaattcacca cgaatttaac cgccacggtg cgcgctatcc gtcctataac accattgtcg
    13381 gcagcggtga aaacggctgc attctgcact acaccgaaaa cgagagtgaa ctgcgcgacg
    13441 gtgacctggt gttgattgac gcgggttgtg aatacaaagg ttacgcgggc gatattaccc
    13501 gcaccttccc ggtcaacagc aaattcaccc aggcccagcg tgaaatctac gacattgtgc
    13561 tggagtctct cgaaaccagc ctgcgcctgt atcgtccggg aacttccatt ctggaagtca
    13621 ctggtgaagt ggtgcgcatc atggttagcg gcctggtaaa actcggcatt ctgaaaggtg
    13681 atgttgatga actgatcgct cagaatgccc atcgtccttt ctttatgcat ggccttagcc
    13741 actggttagg gctagatgtc catgacgttg gcgtttatgg tcaggatcgc tcgcgcattc
    13801 tggaaccggg catggtactg accgtagagc cagggctgta tattgcgccg gatgcagaag
    13861 tgccagaaca atatcgcggt atcggcattc gtattgaaga cgacattgtg attaccgaaa
    13921 ccggtaacga aaacctcacc gccagcgtgg tgaaaaagcc ggaagaaatc gaagcgttga
    13981 tggctgctgc gagaaagcaa tgagcgtaat catcgtcggt ggcggcatgg cgggcgcgac
    14041 gctggcgctg gctatttccc ggttaagtca cggggcgctg ccggtacatt tgattgaagc
    14101 gactgcgcca gagtcacatg ctcatccggg ctttgatgga cgagcgatag cgctggcggc
    14161 gggtacctgt cagcaactgg cgcgcatcgg cgtctggcaa tctctggcgg attgcgcaac
    14221 tgccatcacc accgtgcatg tcagcgatcg tggtcacgct ggatttgtca ccctcgccgc
    14281 agaagattac caactggcgg cgctgggaca ggttgtcgaa ttgcacaatg tcgggcaacg
    14341 gctgtttgca ttgctgcgta aagcacctgg cgtaacgctg cattgccctg atcgcgtggc
    14401 taacgttgcc cgtactcaga gtcacgttga agtgacgctg gagagtggcg agacgctgac
    14461 gggccgcgtg ctggtagcag ctgatggcac ccattcagcg ttagccaccg cgtgcggcgt
    14521 tgactggcag caggagcctt acgaacaact ggccgtgatt gccaacgttg cgacttccgt
    14581 tgcgcacgaa ggccgcgctt ttgaacgctt cacgcaacat ggcccgctgg cgatgttgcc
    14641 gatgtctgac ggacgctgtt cgctggtctg gtgtcatcca ctggaacggc gcgaagaggt
    14701 gctgtcgtgg agcgacgaga agttttgccg tgaactccag tcggcctttg gctggcgact
    14761 tggaaaaatt acccacgccg gtaaacgcag tgcttatccg ctggcgttaa cccgcgccgc
    14821 cagagctatt acccatcgta ccgtgctggt gggcaatgcg gcgcaaactc tgcacccgat
    14881 tgccgggcaa gggtttaacc tcggtatgcg agatgtcatg agccttgcgg aaaccctgac
    14941 tcaggcgcat gagcgcggag aagacatcgg tgattacggc atattgtgcc gctatcagca
    15001 gcgtcgacag agcgatcgcg aagcaaccat cggcgtcacg gacagcctgg tacatctttt
    15061 tgccaaccgt tgggcaccgc tggttgtcgg gcgcaacatc ggactgatga cgatggaatt
    15121 attcaccccg gcacgcgatg tgctggcgca gcgcaccctc ggttgggtgg cgcgttgaag
    15181 gcggttttaa ggaataaaca atgcaatgtg ttgatgtagc cattgttggt ggcggcatgg
    15241 tggggctggc ggttgcctgc ggcttacagg ggagcggctt acgcgttgcc gtactggagc
    15301 agcgcgtacc ggaacctctg gcggcggatg caccaccaca actgcgcgtt tcggctatca
    15361 atgccgccag cgaaaaatta ctcacccgtc ttggcgtctg gcaggacatt ctctctcgta
    15421 gggccagttg ttatcacggt atggaagtgt gggacaaaga cagttttggt cacatttcgt
    15481 ttgacgatca aagcatgggc tatagccatc ttgggcatat cgttgaaaac tcagtgattc
    15541 actacgcgct gtggaacaaa gcgcagcagt cgtcagatat cactctgttg gcccccgcag
    15601 aattacagca ggtcgcctgg ggagaaaatg aaactttcct gacgctgaaa gatggcagca
    15661 tgttaacggc gcgtctggtg attggcgcgg acggtgctaa ttcctggttg cgcaacaaag
    15721 cagatatttc gctgactttc tgggattatc agcatcacgc gctggtagcg accattcgca
    15781 cggaagaacc gcatgatgcg gtggcgcggc aggttttcca tggcgaaggc attctggcct
    15841 ttttaccgct tagcgatccg catctttgct caattgtctg gtcactgtcg ccagaggaag
    15901 cgcagcggat gcagcaggca agtgaagatg aatttaatcg cgcgttaaat atcgcttttg
    15961 ataatcgcct gggcttatgc aaggttgaga gcgcgcgtca ggtgttccca ctgacggggc
    16021 gttatgcgcg ccagtttgcc gcgcaccgtc tggtgctagt gggcgacgcc gcgcatacca
    16081 ttcacccgct ggcggggcag ggagtaaatc tcggctttat ggatgctgca gagctgattg
    16141 ctgaactgaa acggttgcat cgtcagggga aagacatcgg gcagtacatt tacctgcgcc
    16201 ggtatgagcg tagccgcaag cacagtgcgg cgctgatgct ggctggtatg cagggattcc
    16261 gcgatctgtt ttccggtacc aatccggcga aaaaactgct gcgtgatatt ggtttgaaac
    16321 tggccgatac gcttcctggc gttaaaccac aacttatccg ccaggcaatg ggattaaacg
    16381 atttgcctga atggctgcgt taaaaatttc tcttctgctg tttatttgat acccatcaca
    16441 ctttcatctc ccggtttttt cgccgggaga ttttcctcat ttgaaataaa ctaatttcac
    16501 ctccgttttc gcattatatt ttctaatgtc attatttttt gatttagtgt tttttgacat
    16561 ttttttagct cttaatattg ccttattcaa attagatttc taatggcatc atctttatat
    16621 agaaactggt gtgttttttg gttttttatt ctgtcgcgat tttggcgttt tttaaccata
    16681 agctaatgtg atgatcaatt ttaccttatg gttaacagtc tgtttcggtg gtaagttcag
    16741 gcaaaagaga acgattgcgt tggggaccgg gagtggctcc gatgctgggt ttcgtggtga
    16801 taatttcacc atgaaaagtt gtcagccccg cttattcaat gaggacaaga tggcacaaca
    16861 gactcctttg tacgaacaac acacgctttg cggcgctcgc atggtggatt tccacggctg
    16921 gatgatgccg ctgcattacg gttcgcaaat cgacgaacat catgcggtac gtaccgatgc
    16981 cggaatgttt gatgtgtcac atatgaccat cgtcgatctc cgcggcagcc gcacccggga
    17041 gtttctgcgt tatctgctgg cgaacgatgt ggcgaagctc accaaaagcg gcaaagccct
    17101 ttactcgggg atgttgaatg cctctggcgg tgtgatagat gacctcatcg tctactactt
    17161 tactgaagat ttcttccgcc tcgttgttaa ctccgccacc cgcgaaaaag acctctcctg
    17221 gattacccaa cacgctgaac ctttcggcat cgaaattacc gttcgtgatg acctttccat
    17281 gattgccgtg caagggccga atgcgcaggc aaaagctgcc acactgttta atgacgccca
    17341 gcgtcaggcg gtggaaggga tgaaaccgtt ctttggcgtg caggcgggcg atctgtttat
    17401 tgccaccact ggttataccg gtgaagcggg ctatgaaatt gcgctgccca atgaaaaagc
    17461 ggccgatttc tggcgtgcgc tggtggaagc gggtgttaag ccatgtggct tgggcgcgcg
    17521 tgacacgctg cgtctggaag cgggcatgaa tctttatggt caggagatgg acgaaactat
    17581 ttctccttta gccgccaaca tgggctggac tatcgcctgg gaaccggcag atcgtgactt
    17641 tatcggtcgt gaagccctgg aagtgcagcg tgagcatggt acagaaaaac tggttggtct
    17701 ggtgatgacc gaaaaaggcg tgctgcgtaa tgaactgccg gtacgcttta ccgatgcgca
    17761 gggcaaccag catgaaggca ttatcaccag cggtactttc tccccgacgc tgggttacag
    17821 cattgcgctg gcgcgcgtgc cggaaggtat tggcgaaacg gcgattgtgc aaattcgcaa
    17881 ccgtgaaatg ccggttaaag tgacaaaacc tgtttttgtg cgtaacggca aagccgtcgc
    17941 gtgatttact tttttggaga ttgattgatg agcaacgtac cagcagaact gaaatacagc
    18001 aaagaacacg aatggctgcg taaagaagcc gacggcactt acaccgttgg tattaccgaa
    18061 catgctcagg agctgttagg cgatatggtg tttgttgacc tgccggaagt gggcgcaacg
    18121 gttagcgcgg gcgatgactg cgcggttgcc gaatcagtaa aagcggcgtc agacatttat
    18181 gcgccagtaa gcggtgaaat cgtggcggta aacgacgcac tgagcgattc tccggaactg
    18241 gtgaacagcg aaccgtatgc aggtggctgg atctttaaaa tcaaagccag cgatgaaagc
    18301 gaactggaat cactgctgga tgcgaccgca tacgaagcat tgttagaaga cgagtaacgg
    18361 ctttattcct cttctgcggg agaggatcag ggtgaggaaa atttatgcct caccctcact
    18421 ctcttcgtaa ggagagaggt tcacaattca ctgcacgttt caggaaccat cgctcatgac
    18481 acagacgtta agccagcttg aaaacagcgg cgcttttatt gaacgccata tcggaccgga
    18541 cgccgcgcaa cagcaagaaa tgctgaatgc cgttggcgca caatcgttaa acgcgctgac
    18601 cggccagatt gtaccgaaag atattcagct tgcgaccccg ccgcaggttg gcgcaccggc
    18661 gaccgaatac gccgcactgg cagaactcaa ggctattgcc agtcgcaata aacgcttcac
    18721 gtcttacatc ggcatgggtt acaccgccgt gcagctaccg ccggttatcc tgcgtaacat
    18781 gctggaaaat ccgggctggt ataccgcgta cactccgtat caacctgaag tctcccaggg
    18841 ccgccttgaa gcactgctca acttccagca ggtaacgctg gatttgactg gactggatat
    18901 ggcctctgct tctcttctgg acgaggccac cgctgccgcc gaagcaatgg cgatggcgaa
    18961 acgcgtcagc aaactgaaaa atgccaaccg cttcttcgtg gcttccgatg tgcatccgca
    19021 aacgctggat gtggtccgta ctcgtgccga aacctttggt tttgaagtga ttgtcgatga
    19081 cgcgcaaaaa gtgctcgacc atcaggacgt cttcggcgtg ctgttacagc aggtaggcac
    19141 taccggtgaa attcacgact acactgcgct tattagcgaa ctgaaatcac gcaaaattgt
    19201 ggtcagcgtt gccgccgata ttatggcgct ggtgctgtta actgcgccgg gtaaacaggg
    19261 cgcggatatt gtttttggtt cggcgcaacg cttcggcgtg ccgatgggct acggtggccc
    19321 acacgcggca ttctttgcgg cgaaagatga atacaaacgc tcaatgccgg gccgtattat
    19381 cggtgtatcg aaagatgcag ctggcaatac cgcgctgcgc atggcgatgc agactcgcga
    19441 gcaacatatc cgccgtgaga aagcgaactc caacatttgt acttcccagg tactgctggc
    19501 aaacatcgcc agcctgtatg ccgtttatca cggcccggtt ggcctgaaac gtatcgctaa
    19561 ccgcattcac cgtttgaccg atatcctggc ggcaggcctg caacaaaaag gtctgaagct
    19621 gcgccatgcg cactatttcg acactctgtg tgtggaagtg gccgacaagg cgggcgtact
    19681 ggcgcgtgcc gaagcggctg aaatcaacct gcgtagcgat atcctgaacg cggttgggat
    19741 cacccttgat gaaaccacca cgcgtgaaaa cgtaatgcag cttttcagcg tgctgctggg
    19801 cgataaccac gggctggaga tcgacacgct ggacaaagac gtggctcacg acagccgctc
    19861 tattcagcct gcgatgctgc gcgacgacga aatcctcact catccggtgt ttaatcgcta
    19921 ccacagcgaa accgaaatga tgcgctatat gcactcgctg gagcgtaaag atctggcgct
    19981 gaatcaggcg atgatcccgc tgggttcctg caccatgaaa ctgaacgccg ccgccgagat
    20041 gatcccaatc acctggccgg aatttgccga actgcacccg ttttgcccgc cggaacaggc
    20101 tgaaggttat cagcagatga ttgcgcagct ggctgactgg ctggtgaaac tgaccggtta
    20161 cgacgccgtt tgtatgcagc cgaactccgg cgcacagggc gaatacgcgg gcctgctggc
    20221 gattcgtcat tatcatgaaa gccgcaacga agggcatcgc gatatctgcc tgatcccggc
    20281 ttctgcgcac ggaactaacc ccgcttctgc acatatggca ggaatgcagg tggtggttgt
    20341 ggcgtgtgat aaaaacggca acatcgatct gactgatctg cgcgcgaaag cggaacaggc
    20401 gggcgataac ctctcctgta tcatggtgac ttatccctct acccacggcg tgtatgaaga
    20461 aacgatccgt gaagtgtgtg aagtcgtgca tcagttcggc ggtcaggttt accttgatgg
    20521 cgcgaacatg aacgcccagg ttggcatcac ctcgccgggc tttattggcg cggacgtttc
    20581 gcacctcaac ctgcataaaa ctttctgcat tccgcacggc ggtggtggtc cgggtatggg
    20641 accgatcggt gtgaaagcgc atctggcacc gtttgtaccg ggtcatagcg tggtgcaaat
    20701 cgaaggcatg ttaacccgtc agggcgcagt ttctgcggca ccgttcggta gcgcctctat
    20761 cctgccaatc agctggatgt acatccgcat gatgggcgca gaagggctga aaaaagcaag
    20821 ccaggtggca atcctcaacg ccaactatat tgccagccgc ctgcaggatg ccttcccggt
    20881 gctgtatacc ggtcgcgacg gtcgcgtggc gcacgaatgt attctcgata ttcgcccgct
    20941 gaaagaagaa accagcatca gcgagctgga tattgccaag cgcctgatcg actacggttt
    21001 ccacgcgccg acgatgtcgt tcccggtggc gggtacgctg atggttgaac cgactgaatc
    21061 tgaaagcaaa gtggaactgg atcgctttat cgacgcgatg ctggctatcc gcgcagaaat
    21121 tgaccaggtg aaagccggtg tctggccgct ggaagataac ccgctggtga acgcgccgca
    21181 cattcagagc gaactggtcg ccgagtgggc gcatccgtac agccgtgaag ttgcggtatt
    21241 cccggcaggc gtggcagaca aatactggcc gacggtgaaa cgtctggatg atgtttacgg
    21301 cgaccgtaac ctgttctgct cctgcgtacc gattagcgaa tacctgtaat tcactgattc
    21361 gactattttc taaaggcgct tcggcgcctt tttagtcaga tgacaaagta caaaagtgct
    21421 cagacagtcc cctcgcccct ttggggagag ggttagggtg aggggaacag gccggcactg
    21481 gcgcgaatat ttaccctcac cccggccctc tccctgaaag ggcgagggga aaagcgtgcc
    21541 aacattgaag attgagccag tttgttagca atctcaaaga tacgtcaacg aattaatttt
    21601 tctcggaaaa acaaatggct atagcacttg tgaccggtgg cagtcgcggc atcgggcggg
    21661 caactgcatt actgttggcg aaagaagagt atacggtggc ggttaattat caacaaaacc
    21721 tccatgcggc gcaggaagtg gtgaacttaa tcacgcaagc cggtggcaag gcattcgtgc
    21781 tccaggcgga tatcagcgac gaaaatcagg tcatcgcaat gtttacagca atcgatcagc
    21841 acgatgaacc gctagcagcg ctggtcaata acgccgggat cttgtttacc cagtgcaccg
    21901 ttgaaaacct taccgcagag cgaatcaacc gagtactttc caccaacgtg acgggatatt
    21961 ttctctgctg ccgcgaggcg gtaaaacgca tggcgcttaa aaatggtggc agtggcggcg
    22021 ctatcgtcaa tgtctcttcg gtggcctcac ggttgggttc gccaggggaa taggttgatt
    22081 acgcggcatc gaaaggggcg attgatacgt taaccaccgg actatcgctg gaagtcgccg
    22141 cgcaggggat ccgcgttaac tgcgtgcggc cagggtttat ttataccgaa atgcacgcca
    22201 gcggcggcga gcttggacgc gtcgatcgcg ttaagtcgaa catccccatg cagcgtggtg
    22261 gacaggcaga agaggtcgcg caggccattg tctggctact aagtgataaa gcctcttacg
    22321 tcacgggaag ttttatcaat ttggcgggcg ggaaataaaa cagggaagtt gtctgaccgg
    22381 atgcaacaag tattgcatcc ggtacttcat cgacttaaag cttctcgccg ttgctggcaa
    22441 tcacctcttt gtaccagtta aagctcttct tacgtgaacg cgacatatcg ccagtaccgt
    22501 cgtcatgttt attcacatag ataaagccgt agcgtttgct gtactgcccg gtagtgaatg
    22561 acacgcagtc gatgcagccc cacggtgtgt agcccatcag atccacacca tcgtaagtca
    22621 ctgctttttt catctcttca atatgggcgc gcaggtagtc aatgcggtag tcgtcgttga
    22681 tgctgccatc ttcttccact ttgtcgtaag cgccaaaacc gttttcgaca ataaacagcg
    22741 gcctctgata acgctcatac agttcgcaaa gggcatagcg cagacctact ggatcaatct
    22801 gccagcccca gtcagacgct ttaacatacg ggttcggtac gctgccttca aaaccagaga
    22861 tcgcatcgcc ggtgccgcct tcggccttca ctgcgttgat catgtaatag ctgaaaccaa
    22921 gataatcgca ggtgccttca cgcagtacat ccagatcgcc atcttccatt ttgatgttaa
    22981 atccgcgacg ctcccactcg ttcaacacat aggacgggta atagccgcgt agctgcacat
    23041 cggtaaagac gtagcgttcg cgcatcgact cctgagcgaa catcacatcg tccgggttac
    23101 aggagtaagg atagagcggc accatcgcca gcatacagcc gactttcatc tccgggttaa
    23161 tgcgacgcgc ggctttcact gctagggcgc tggcgacaaa ctggtgatgc agcacctggt
    23221 acatcgtctc ttccgggttg tcatgctcgg tatacaccac gccggagcag cagtaaccaa
    23281 acagcggcgc acgccagtta cgctggttgt ttatttcgtt gaaggtcatc cagtatttga
    23341 ctttatgctt gtagcgttcg aataccactt ccgcgaaacg gacaaagaaa tcaacgactt
    23401 tacggttggt ccagctaccg tattgctgca ccagatgcag cggtatttca aagtgggaga
    23461 gggttatcac cggttcgatg ttgtatttca gcagttcatc gaacagagag tcgtaaaact
    23521 tcagcccttc ttcgtttggc tgagcttcat caccttttgg aaaaatacgc gtccaggcga
    23581 tggaagtccg aaaacatttg aagcccattt cggcaaatag cttgatgtct tccttgtagt
    23641 gaccataaaa atcaacggct tcatggtttg gatagtattt tcctggcaag acttctttgg
    23701 tgatttcgcg cggcacgccg tgtgcgccac cggtcagaac gtcacaaatg ctcggtcctt
    23761 tgccgccttt gttccagccg ccttcgacct gatgagcggc aacggcgcca ccccataaga
    23821 aatctttcgg taaggtgagt tttttcacta tcataggctc cagatgagtc aattcttaca
    23881 ggaaatagta ccatgcagcc aaacgacatc actttttctc aacgtttcca ggatgacatt
    23941 ctggctgggc gtaaaaccat caccatccgc gacgagtctg aatcgcactt caaaacgggt
    24001 gatgtgcttc gtgtcggacg ttttgaagat gacggttatt tttgcacgat tgaagtcacc
    24061 gcaacctcaa ccgtaacgct ggatacgctg acggaaaaac atgcagagca ggaaaatatg
    24121 accctgactg aactgataaa ggtcattgcc gacatctatc ccggtcagac acagttttat
    24181 gtgattgaat ttaaatgtct ttaaattgaa ctcacgcctg ttagttgaaa tttctcattt
    24241 aatttcatga tttttaggag attagtctca aatcagaatt tattttagct aacaggtgtt
    24301 cactggaact attctcagtt acgctggaga ggtatacatg tgcgtgtacg tttctccgga
    24361 gtaagttatg gttcagaagc ccctcattaa gcagggatat tcgctggcag aggaaattgc
    24421 caacagcgtc agtcacggca ttgggttggt gtttggtatc gttgggctgg tgttgctact
    24481 ggttcaggcg gtggatctca atgccagcgc cacagcgata accagctaca gcctctatgg
    24541 cggcagtatg atcctgctgt tcctcgcttc gacgctctat cacgccattc ctcatcaacg
    24601 ggcaaaaatg tggctgaaga aatttgacca ttgcgctatt tacctgttga ttgccggaac
    24661 ctacacgccg tttttgctgg tggggctgga ttctccgtta gcgcgcgggt tgatgattgt
    24721 tatctggagc ctggcattgc tggggattct gtttaaactg accatcgcgc accgattcaa
    24781 aattttatct ctggtgacct atctggcgat gggctggctg tcgctggtgg taatttatga
    24841 aatggcagtt aagctcgcgg cgggcagcgt taccttactg gcggtaggcg gcgtggttta
    24901 ttcgctcgga gtgattttct atgtctgcaa acgcattccc tacaatcatg ccatctggca
    24961 cggcttcgtg ctcggcggca gtatgtgcca ctttctggcg atctatttgt atattgggca
    25021 ggcgtaatgg gtatgccttt gtaggcctga taagacgcgc cagcgtcgca tcaggcatcg
    25081 gagcgcaacc gccggatgcg gcgtgaacgc cttatccgat ctacgggcct cgtccctgtt
    25141 gtgataaagg catcaaatcc cagacatgat aagacgcgtc agcgtcgcat caggcgataa
    25201 atgcctgatg cgatacagag atttactctt cgagtgaata cggcagcggc tcgatatgca
    25261 gtgtattcgc atcgtcgcgt acgcggaaga tgctgtccgg ttccatatcg ttattcatga
    25321 cgacctgtac cacgacctga ccatcttcca gttttaccgc agccagcacc gtaccggtac
    25381 gacgccagtt ctcgcccatt ttcagctcta agtcttcacc agcttccggc agtcggctgg
    25441 cgctacctgc cagcaaccag agcgcacgtt tattggcacc acggaatttt gctcgcgcca
    25501 ccatctcttg tccggtataa cagcctttct taaaactgat accgcccagc gcctggagat
    25561 tggtcgcctg tgggataaac tgcccgctgt tcgcggcatc aatcaccggg aaacccgctt
    25621 caatgtttaa tgccagccac tgttggctat tgttcagttc cgcttcaccg cgcagtttat
    25681 cggtcagcat attggcagta gcttcatcgg ttacgatcag gaaacgttct gccgggtgtt
    25741 caaaccatag caaagtggtc gcgccttctt taactacctg tttttctctc gaaggtagtt
    25801 cactaaagag attggcgagc gcggcgcgcg cctgaaaacc ggcaacacca agcagcacac
    25861 gctcgtcgtc tgccgcgatg gtcactttag agaacaccgc atattttttc agttcagtca
    25921 gctgcggttc acgcacgctg cgccgttcaa tccacgcaaa gccatcgccg tcgcggaaca
    25981 gacgtaaatt gctccacatt ttacctttgg cgtcgcaatg ggcggcgagc aggtgctgat
    26041 tttctgtcat ctggctgaca tctgctgtca cctgaccctg catatatttt tcgctgtccg
    26101 cgccagtaat ggtggcaagc gcccagtcat caagcgtcat cagcgtcagc ggtaaacggg
    26161 cagaagccgt aggctgacgg ggaggaaaag gtgtaaaagc cataatagag tcctgagttg
    26221 cttaacggcg tattaataac taatggtaaa agagctatga ggcaatgcaa gtgctttcac
    26281 tacgcgatct gtgccttctg cgaggcgact tccaaaaaaa tgaagctctt gaattgttgt
    26341 gaattaattt cgcgatcgcg atggtgttta ctgatattcc cgtaaaagaa gtcgaaaaac
    26401 acgttacaat agccgggtac tggattttcg tgagacagga agaagatgga cattaacaac
    26461 aaagcccgca ttcattgggc atgccgccgt ggtatgcgcg aactcgatat ttcaatcatg
    26521 ccgtttttcg aacatgagta cgacagctta agcgatgacg aaaaacgcat ctttattcgt
    26581 ctgctggaat gtgacgatcc ggacctgttt aactggctga tgaatcacgg taaaccggcc
    26641 gatgcagaac tggaaatgat ggtccgactc atccagacac ggaaccggga acgtggtcct
    26701 gtggcaatct gatttgcgcg tctcctggcg cgcacagtgg ctttccttgc tgattcatgg
    26761 gctggttgcc gctgttattt tactcatgcc ctggccgctc agttacaccc cgttatggat
    26821 ggtgttactt tcgctggtgg tatttgattg cgttcgcagc cagcggcgta ttaatgctcg
    26881 ccagggggaa attcgattgt tgatggacgg gcgtttgcgt tggcaagggc aggagtggag
    26941 catcgtcaaa gcaccgtgga tgattaagag cggcatgatg ctgcgtttac gttctgatgg
    27001 cggtaaacgg caacatttat ggctggcagc cgacagcatg gacgaagctg aatggcggga
    27061 tttacggcgg attttgttgc aacaagagac gcaaagataa atatgacggc aaagcatatg
    27121 cgctaagccg tcagtgagat caggcgtaat gctctgccat ttcgttgagg atttgctcgc
    27181 accagctctg aatacgctcg tcgctaaggt catactggtt agtttcatcc agcgccagac
    27241 ccacgaacag ttgcccgtca gcaatcaccg gtttcgggct ggtaaattca tatccttccg
    27301 ttggccagta gccgacgaac ttcacgcctt tggtcgagag tttgtcatgc agcataccga
    27361 gcgcatcgag gaaccactcg ccgtatccca gttgatcgcc aagcccatac agcgcaacaa
    27421 ttttaccttc aaggttcagg tcgtcgagct gatcccagac ggcttcccag tcttcctgga
    27481 tttcgccaaa atcccaggtc gggataccca gaatgagcac atcgtactgc tccattaatt
    27541 tcggggagtc gtccttgagg ttatgtaagg tcaccagttc tgggccgata atatcgcgga
    27601 ttttttctgc cgccatttcg gtgtaacagg tgctggaacc gtaaaaaaga cccatattca
    27661 taacgtaagc ttctcgattc tgctgtggct tttgcggcta gtgtatcaga atcgctttag
    27721 tcacggcaca ataaggcata atggatcaaa tgagtgacca taaggggcgc aagtgaaaca
    27781 ggatctggca cgcatcgagc agtttcttga tgctctgtgg ctggaaaaaa atctggctga
    27841 aaatacgttg aacgcttacc gtcgcgatct gtcaatgatg gtggagtggt tgcatcaccg
    27901 cgggttgacg ctggcgacgg cgcaaagtga cgatttgcag gcattactgg cagaacggct
    27961 agagggcggg tataaagcca ccagctcagc gcgtttgctg agtgcagtgc gccgattgtt
    28021 ccagtatctt tatcgcgaaa agtttcgtga agacgatccc agtgcgcatc tcgcttcacc
    28081 gaaattgcca cagcgtttgc caaaagattt aagcgaagcg caggtcgaac gtttattaca
    28141 ggcaccatta attgatcagc cactggagct acgcgataaa gccatgcttg aagtgttgta
    28201 tgctaccggg ctgcgtgtct ctgaactggt cgggctgaca atgagtgata tcagcctacg
    28261 tcagggcgta gtgcgggtca ttggtaaagg caacaaagag cgcctggtgc cgttaggtga
    28321 agaggccgtt tactggctgg aaacctatct ggaacatggg cgtccgtggc tgttgaatgg
    28381 tgtgtcaatt gacgtgttgt ttcccagcca gcgtgcgcag cagatgacgc gacagacctt
    28441 ctggcaccgc attaaacatt atgccgtgct ggcgggtatc gacagcgaaa agctgtcacc
    28501 gcatgtgttg cgtcacgctt ttgccactca tttattaaat catggtgcgg atttacgcgt
    28561 ggtgcagatg ctactgggcc acagcgatct ctccaccacg caaatttata cgcatgtcgc
    28621 taccgagcgt ctgcggcaac ttcatcaaca gcatcacccg cgggcgtgat gtctgaaaag
    28681 aacgggaaga tttatgaaga aaggttttat gttgtttact ttgttagcgg cgttttcagg
    28741 ctttgctcag gctgatgacg cggcaattca acaaacgtta gccaaaatgg gcattaaaag
    28801 cagcgatatt cagccagcac ccgtggctgg catgaagact gtgctgacta acagcggtgt
    28861 gttgtacatc accgatgacg gtaaacatat cattcagggg ccaatgtatg acgttagtgg
    28921 cgcggctccg gtcaatgtca ccaataaaat gctgctaaag cagttgaatg cgcttgaaaa
    28981 agagatgatc gtttataaag cgccgcagga aaaacacgtc atcaccgtgt ttactgatat
    29041 tacctgtggg tactgccaca aactgcatga gcaaatggca gactacaacg cgctggggat
    29101 caccgtgcgt tatcttgctt tcccgcgcca ggggctggag agccaggctg agcaacaaat
    29161 gaaagccatc tggtgtgcga aagataaaaa caaagcgttt gatgatgtga tggctggtaa
    29221 agctgccact ccggcaagtt gcgatatcga tattgccgat cattacgcac ttggcgtcca
    29281 gcttggcgtt agcggcactc cggcaattgt gctgagcaat ggcacacttg ttccgggtta
    29341 ccagccgccg aaagagatga aagaattcct cgacgaacac caaaaaatga ccagcggtaa
    29401 ttaattcgcg tgaaacaaca gatacaactt cgtcgccgtg aagtcgatga aacggcagac
    29461 ttgcccgctg aattgcctcc cttgctgcgc cgtttatacg ccagccgggg agtacgcagt
    29521 gcgcaagaac tggaacgcag tgttaaaggt atgttgccct ggcagcaact aagcggtgtc
    29581 gaaaaggccg ttgagatcct ttacaacgct tttcgcgaag gaacgcggat tattgtggtc
    29641 ggtgatttcg acgccgacgg cgcgaccagc acggctctaa gcgtgctggc gatgcgctcg
    29701 cttggttgca gcaatatcga ctacctggta ccaaaccgtt tcgaagacgg ttacggctta
    29761 agcccggaag tggtcgatca ggcccatgcc cgtggcgcgc agttaattgt cacggtggat
    29821 aacggtattt cctcccatgc gggggttgaa cacgctcgct cgttgggcat tccggttatt
    29881 gttaccgatc accatttgcc aggcgaaaca ttacccgcgg cggaagcgat cattaaccct
    29941 aacttgcgcg actgtaattt cccgtcgaaa tcactggcag gcgtgggtgt ggcgttttat
    30001 ctgatgctgg cgctgcgcac ctttttgcgc gatcagggct ggtttgatga gcgcggcatc
    30061 gcaattccta acctggcaga actgctggat ctggtcgcgc tggggacagt ggcggacgtc
    30121 gtgccgctgg acgctaataa tcgcattctg acctggcagg ggatgagtcg catccgtgcc
    30181 ggaaagtgcc gtccagggat taaagcgctg ctggaagtgg caaaccgtga tgcacaaaaa
    30241 ctcgccgcca gcgatttagg ttttgcgctg gggccacgtc tcaatgctgc cgggcgactg
    30301 gacgatatgt ccgtcggtgt ggcgctgttg ctgtgcgaca acatcggcga agcgcgcgtg
    30361 ctggcaaatg aactcgatgc gctaaatcag acgcgaaaag agatcgaaca aggaatgcag
    30421 attgaagcct tgaccctgtg cgagaaactg gagcgaagtc gcgacacgct acccggcggg
    30481 ctggcaatgt atcactccga atggcatcag ggcgttgtcg gtattctggc ttcgcgcatc
    30541 aaagagcgtt ttcaccgtcc ggttatcgcc tttgcgccag caggtgatgg tacgctgaaa
    30601 ggttccggtc gctccattca ggggctgcat atgcgtgatg cgctggagcg attagacaca
    30661 ctctaccccg gtatgatgct gaagtttggc ggtcatgcga tggcggcggg tttgtcgctg
    30721 gaagaggata aattcgaact ctttcaacaa cggtttggcg agctggttac cgagtggctg
    30781 gacccttcgc tattgcaagg cgaagtggtg tcagacggcc cgttaagccc ggccgaaatg
    30841 accatggaag tggcgcagct gctgcgcgat gctggcccgt gggggcagat gttcccggag
    30901 ccgctgtttg atggtcattt ccgtctgctg caacagcggc tggtgggcga acgtcatttg
    30961 aaagtcatgg tcgaaccggt cggcggcggt ccgctgctgg atggtattgc ttttaatgtc
    31021 gataccgccc tctggccgga taacggcgtg cgcgaagtgc aactggctta caagctcgat
    31081 atcaacgagt ttcgcggcaa ccgcagcctg caaattatca tcgacaatat ctggccaatt
    31141 tagcgtcatc ttctctataa aaaagagcgt ggattgggta caatcccgct cttatcaccg
    31201 cattttgact agctcaataa aagaaatcag accatgtttg aaattaatcc ggtaaataat
    31261 cgcattcagg acctcacgga acgctccgac gttcttaggg ggtatctttg actacgacgc
    31321 caagaaagag cgtctggaag aagtaaacgc cgagctggaa cagccggatg tctggaacga
    31381 acccgaacgc gcacaggcgc tgggtaaaga gcgttcctcc ctcgaagccg ttgtcgacac
    31441 cctcgaccaa atgaaacagg ggctggaaga tgtttctggt ctgctggaac tggctgtaga
    31501 agctgacgac gaagaaacct ttaacgaagc cgttgctgaa ctcgacgccc tggaagaaaa
    31561 actggcgcag cttgagttcc gccgtatgtt ctctggcgaa tatgacagcg ccgactgcta
    31621 cctcgatatt caggcggggt ctggcggtac ggaagcacag gactgggcga gcatgcttga
    31681 gcgtatgtat ttgcgctggg cagaatcgcg tggtttcaaa actgaaatca tcgaagagtc
    31741 ggaaggtgaa gtggcgggta ttaaatccgt gacgatcaaa atctccggcg attacgctta
    31801 cggctggctg cgtacagaaa ctggcgttca ccgcctggtg cgtaagagcc cgtttgactc
    31861 cggcggtcgt cgccacacgt cgttcagctc cgcgtttgtt tatccggaag ttgatgatga
    31921 tattgatatc gaaatcaacc cggcggatct gcgcattgac gtttatcgcg cgtccggcgc
    31981 gggcggtcag cacgttaacc gtaccgaatc tgcggtgcgt attacccaca tcccgaccgg
    32041 gatcgtgacc cagtgccaga acgaccgttc ccagcacaag aataaagacc aggccatgaa
    32101 gcagatgaaa gcgaagcttt atgaactgga gatgcagaag aaaaatgctg agaaacaggc
    32161 gatggaagat aacaaatccg acatcggctg gggcagccag attcgttctt atgtccttga
    32221 tgactcccgc attaaagatc tgcgcaccgg ggttgaaacc cgcaatacgc aggccgtgct
    32281 ggacggcagc ctggatcaat ttatcgaagc aagtttgaaa gcagggttat gaggaaccaa
    32341 catgtctgaa caacacgcac agggcgctga cgcggtagtc gatcttaaca atgaactgaa
    32401 aacgcgtcgt gagaagctgg cgaacctgcg tgagcaggga attgccttcc cgaacgattt
    32461 ccgtcgcgat catacctctg accaattgca cgcagaattc gacggtaaag agaacgaaga
    32521 actggaagcg ctgaacatcg aagtcgccgt tgctggccgc atgatgaccc gccgtattat
    32581 gggtaaagcc tcttttgtta ccctgcagga cgttggcggt cgtattcagc tgtacgttgc
    32641 ccgtgacgat cttccggaag gcgtttacaa cgagcagttc aaaaaatggg atctcggcga
    32701 catcctcggc gcgaaaggta aactgttcaa aaccaaaacc ggcgaactgt ctatccactg
    32761 caccgagctg cgtctgctga ccaaagcact gcgtccgctg ccggacaaat tccacggctt
    32821 gcaggatcag gaagcgcgct atcgtcagcg ttatctggat ctcatctcta acgatgaatc
    32881 ccgcaacacc tttaaagtgc gttcgcagat cctctctggc attcgccagt tcatggtaaa
    32941 tcgcggcttt atggaagttg aaacgccgat gatgcaggtg atcccaggcg gtgccgctgc
    33001 gcgtccgttt atcacccatc ataacgcgct ggatcttgac atgtacctgc gtatcgcgcc
    33061 ggaactgtac ctcaagcgtc tggtggtcgg tggcttcgag cgtgtattcg aaatcaaccg
    33121 taacttccgt aacgaaggta tttccgtacg tcataaccca gagttcacca tgatggaact
    33181 ctatatggct tacgcagatt acaaagatct gatcgagctg accgaatcgc tgttccgtac
    33241 tctggcacag gatattctcg gtaagacgga agtcacctac ggcgacgtga cgctggactt
    33301 cggtaaaccg ttcgaaaaac tgaccatgcg tgaagcgatc aagaaatatc gcccggaaac
    33361 cgacatggcg gatctggaca acttcgactc tgcaaaagcg attgctgaat ctatcggcat
    33421 ccacgttgag aagagctggg gtctgggccg tatcgttacc gagatcttcg aagaagtggc
    33481 agaagcacat ctgattcagc cgaccttcat tactgaatat ccggcagaag tttctccgct
    33541 ggcgcgtcgt aacgacatta acccggaaat cacagaccgc tttgagttct tcatcggtgg
    33601 tcgtgaaatc ggtaacggct ttagcgagct gaatgacgcg gaagatcagg cgcagcgctt
    33661 cctggatcag gttgccgcga aagacgcagg tgacgacgaa gcgatgttct acgacgaaga
    33721 ttacgtcacc gcactggaac acggcttacc gccgacagca ggtctgggaa ttggtatcga
    33781 ccgtatggta atgctgttca ccaacagcca taccatccgc gacgttattc tgttcccggc
    33841 gatgcgtcca gtaaaataag cattacgtta tgctaataac cccggcaaat gtcggggttt
    33901 tttaattgtg ctgcgcgaaa gcagacaaca attttcttgc ttcactattg gctgcctgca
    33961 ttaccatcca cggactgaac gcccacggcg tggcatcaat accgtgtaat acatctgcta
    34021 aatcacacca ttgataatcc atcacttcat catcgttgat ctgtaacgca ctgttggtgc
    34081 gtgcggcaaa taccggacac acttcatttt ccacaatgcc attcggatcg gtggcgcgat
    34141 agcgaaagtc aggatagata gattcaggag gcgtaatttc cacgccaagc tcataacggc
    34201 aacggcggat cactgcgtct tcgttgcttt ctcccagttg tgggtgccca caaaccgagt
    34261 tagtccacac gccaggccat gcttttttgc tcagtgcgcg gcgggtaact aataattgcc
    34321 ccttggcatt aaacagccaa ctggagaacg cgagatgtaa gagggtgtct gccgtgtgtg
    34381 cggcatactt ttccagcgta cccgtgggaa ctccctgtgc attcaataaa atgacgtgtt
    34441 ccgtttgcat aatttctcac atgtaattct gatcactcat cattatagat aattgaagag
    34501 tgaaatgatt aaccaagtga gcgtttatcg acaaccgccc gttttgagcg gatgccgaca
    34561 ggtaaaaacc atttaaaaaa gtagcatcat atatttgaag cgactttcaa tggccattgc
    34621 aacacagtca gaaatgacag gaatagagag agtaaaaagc aacagcagac tgaatatagc
    34681 gcgcattaaa agatttatat tattctccat gctcattttt cttcagcttg cgcatcagaa
    34741 gccacatacg tactgtcctg acttttaaat ctttatcaga gacggattcc ttcaccaggt
    34801 cagcatgatg ctgatagcca ttaaagaaga cgttcagcac aacggcgcta agggttgcga
    34861 gcataatgcc gctatgtagc agcggttgca gtacggccgg taacttagaa aagaaatcgt
    34921 gagagagcgt cggagtcatg ccaacgccga gactgatcgc cacaatatag aggttgtaac
    34981 ggttggtggt gtagttacag cgcgacagaa ttcgaatccc tgtcgccagt accatgccga
    35041 acatcactag accagcgccg cccagcacaa attgcggaat ggaggctacc agcaccgcca
    35101 tttttggcac catgccaaac aggattaata taattcccga agaaatacac acccagcggc
    35161 tatgaacgcg cgtcacgcta accaggccaa cgttttgaga aaatgacgtg tgggggaagc
    35221 tgttaaacgt gccgcctatc attgtcccta cgccatcgac acgcagcccg cgaataatat
    35281 cgtgtgaaga gagtttacga ccgactattt cacccagtgc caggaacatc cccatcgact
    35341 cgataaacac gatgattaac acggcagtca tggtcagaat ggaaacggga tcgaaaatcg
    35401 gcataccaaa cgacatcggg gtgacaatcg caaaccacaa ggcatcatgt agcccggata
    35461 aattgacttc attcatcatc cacgaaagta aaaagccaaa tacaatcccc agtaatacgg
    35521 cgacgttgga cataaatcct ttcgcatagc gagtaatgag caagataaaa attaagacgg
    35581 caaaggagat acctgaataa acgggattac catattgcgg attcccttta cctccggcgg
    35641 cccagtcaat acccacctga atgatgctaa gtccgacaga agtaataacc acaccggtaa
    35701 ccagtggcgg gaataaaggc atcaagcgac cgataagtgg cgctaataat gtggtgataa
    35761 aacccgcggc gatagtggca ccaaatatcc ccagcaggcc aatatccggg ttcatcccaa
    35821 tggctatcat tggtgttaca gcagcaaagg tcaccgacat aatcaccggc aggcggatcc
    35881 ccataaagcg gccgataccg atacattgca ataatgtgac gatcccgcag caaaagagat
    35941 ccgagctaat gagcatcgca atagcttctt ttgagaggcc cagtcggtca ccaatcataa
    36001 gaggaacagc gactgcacct gcgtacatga caaggacgtg ttgcagaccg agtatgatca
    36061 gctttcctgg tgataatatg cggtcaacct catcagttgg gcggtcttgc ccagaagatg
    36121 agagaagttg ggaatctatg gcgctcatca gtgtttctcc tttcgcccgc cagagtaaaa
    36181 agcaaccgtt tacgttaatg aaactgtcta aacacatgct cgtggagtgc cagtttttgc
    36241 gaggaagggg agttagagac aggaattgcg gaggcaatca cataatcgtg gttaaaccac
    36301 gaaaatgaga agagaacctg acaatggaat tatctgtaat tttctcatat tgatatttca
    36361 ttaatcattc tggcatgtcg tactctcgca tttaatcgtt tttatctgga tagcactctt
    36421 ttgatcggca atgttgaaat aatgaaagcg gcatagattg aggggcaata atttgaactc
    36481 agtcgcaaaa ttataattaa aacggtcatg ctacctaata tatgcccgtt
//
LOCUS       DADMIB010000021        35880 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.021, whole genome shotgun sequence.
ACCESSION   DADMIB010000021 DADMIB010000000
VERSION     DADMIB010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35880
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.021"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            108..455
                     /gene="grxD"
                     /locus_tag="JNZ89_001024"
     CDS             108..455
                     /gene="grxD"
                     /locus_tag="JNZ89_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin 4"
                     /protein_id="HAY8934965.1"
                     /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACG
                     ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
                     TAAKYKSEEPDAE"
     gene            complement(506..4913)
                     /locus_tag="JNZ89_001025"
                     /pseudo
     CDS             complement(506..4913)
                     /locus_tag="JNZ89_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416170.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
     gene            complement(5006..5653)
                     /gene="rnt"
                     /locus_tag="JNZ89_001026"
     CDS             complement(5006..5653)
                     /gene="rnt"
                     /locus_tag="JNZ89_001026"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HAY8934966.1"
                     /translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
                     KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRSAVSEYEALHEIFKV
                     VRKGIKASGCNRAIMVAHNANFDHSFMIAAAERASLKRNPFHPFATFDTAALAGLALG
                     QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV"
     gene            complement(5756..6163)
                     /gene="gloA"
                     /locus_tag="JNZ89_001027"
     CDS             complement(5756..6163)
                     /gene="gloA"
                     /locus_tag="JNZ89_001027"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HAY8934967.1"
                     /translation="MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV
                     GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP
                     VKGGTTVIAFMEDPDGYKIELIEEKDAGRGLGN"
     gene            complement(6244..7341)
                     /gene="nemA"
                     /locus_tag="JNZ89_001028"
                     /pseudo
     CDS             complement(6244..7341)
                     /gene="nemA"
                     /locus_tag="JNZ89_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416167.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-ethylmaleimide reductase"
     gene            complement(7378..7977)
                     /locus_tag="JNZ89_001029"
     CDS             complement(7378..7977)
                     /locus_tag="JNZ89_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416166.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8934968.1"
                     /translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGS
                     FYHYFRSKEAFGVAMLERHYTAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGT
                     ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQA
                     QVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV"
     gene            8080..8319
                     /locus_tag="JNZ89_001030"
     CDS             8080..8319
                     /locus_tag="JNZ89_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HAY8934969.1"
                     /translation="MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSD
                     GEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF"
     gene            8368..9264
                     /locus_tag="JNZ89_001031"
     CDS             8368..9264
                     /locus_tag="JNZ89_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HAY8934970.1"
                     /translation="MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
                     GVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITD
                     RDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF
                     TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF
                     NDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE
                     TLKMTRQQWFRIRKAALGYDVP"
     gene            9345..9866
                     /gene="sodC"
                     /locus_tag="JNZ89_001032"
     CDS             9345..9866
                     /gene="sodC"
                     /locus_tag="JNZ89_001032"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC2"
                     /protein_id="HAY8934971.1"
                     /translation="MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTIT
                     ETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHE
                     GPEGAGHLGDLPALVVNNDGKATDAVITPRLKSLDEIKDKALMVHVGGDNMSDQPKPL
                     GGGGERYACGVIK"
     gene            complement(9867..11466)
                     /locus_tag="JNZ89_001033"
                     /pseudo
     CDS             complement(9867..11466)
                     /locus_tag="JNZ89_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004016165.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
     gene            complement(11547..11856)
                     /locus_tag="JNZ89_001034"
                     /pseudo
     CDS             complement(11547..11856)
                     /locus_tag="JNZ89_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011378749.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(11870..12727)
                     /locus_tag="JNZ89_001035"
     CDS             complement(11870..12727)
                     /locus_tag="JNZ89_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310380.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY8934972.1"
                     /translation="MSIKTIKYFSIIIVAIVAVLAGWWLWNYYMQSPWTRDGKIRAEK
                     VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKAN
                     NEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSG
                     WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKT
                     LRGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSG
                     TTCSIAVGQ"
     gene            complement(12793..12966)
                     /locus_tag="JNZ89_001036"
     CDS             complement(12793..12966)
                     /locus_tag="JNZ89_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000670993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HAY8934973.1"
                     /translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL
                     RGWIYAGDIWHPL"
     gene            13167..13601
                     /gene="slyA"
                     /locus_tag="JNZ89_001037"
     CDS             13167..13601
                     /gene="slyA"
                     /locus_tag="JNZ89_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416159.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SlyA"
                     /protein_id="HAY8934974.1"
                     /translation="MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLP
                     PDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISE
                     MEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG"
     gene            complement(13648..14115)
                     /gene="slyB"
                     /locus_tag="JNZ89_001038"
     CDS             complement(13648..14115)
                     /gene="slyB"
                     /locus_tag="JNZ89_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HAY8934975.1"
                     /translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT
                     IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV
                     QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR"
     gene            14389..15498
                     /gene="anmK"
                     /locus_tag="JNZ89_001039"
     CDS             14389..15498
                     /gene="anmK"
                     /locus_tag="JNZ89_001039"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HAY8934976.1"
                     /translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL
                     KQAVLDICQGQQLTLSQFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVW
                     HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPT
                     ERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK
                     VIRPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV
                     TISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDAVGISGDDMEALAF
                     AWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANP"
     gene            15596..15925
                     /gene="mliC"
                     /locus_tag="JNZ89_001040"
     CDS             15596..15925
                     /gene="mliC"
                     /locus_tag="JNZ89_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lysozyme inhibitor"
                     /protein_id="HAY8934977.1"
                     /translation="MSMKKLLLICLPVLLTGCSAFNQLVEHMQTATLEYQCDEKPLTV
                     KLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNC
                     QLQNPQR"
     gene            15984..16640
                     /gene="pdxH"
                     /locus_tag="JNZ89_001041"
     CDS             15984..16640
                     /gene="pdxH"
                     /locus_tag="JNZ89_001041"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HAY8934978.1"
                     /translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE
                     AKLADPTAMVVATVDEHAQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL
                     FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF
                     LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
                     "
     gene            16769..18043
                     /gene="tyrS"
                     /locus_tag="JNZ89_001042"
     CDS             16769..18043
                     /gene="tyrS"
                     /locus_tag="JNZ89_001042"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HAY8934979.1"
                     /translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA
                     DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD
                     KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR
                     LNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQN
                     QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
                     FMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA
                     LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS
                     DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK"
     gene            18105..18965
                     /gene="pdxY"
                     /locus_tag="JNZ89_001043"
     CDS             18105..18965
                     /gene="pdxY"
                     /locus_tag="JNZ89_001043"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HAY8934980.1"
                     /translation="MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHT
                     QYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAA
                     NPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNV
                     EEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQP
                     VGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK
                     PEHYFSATKL"
     gene            complement(19009..19614)
                     /gene="gstA"
                     /locus_tag="JNZ89_001044"
     CDS             complement(19009..19614)
                     /gene="gstA"
                     /locus_tag="JNZ89_001044"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HAY8934981.1"
                     /translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYF
                     AVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIA
                     TELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNETLKDEHWICGQRFTIADAYLFT
                     VLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK"
     gene            complement(19720..21222)
                     /gene="dtpA"
                     /locus_tag="JNZ89_001045"
     CDS             complement(19720..21222)
                     /gene="dtpA"
                     /locus_tag="JNZ89_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpA"
                     /protein_id="HAY8934982.1"
                     /translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
                     AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY
                     ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN
                     IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINY
                     RNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI
                     VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP
                     ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ
                     SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP
                     LMSLEVYGRVFLQIGVATAIIAVLMLLTAPKLHRMTQDDAADKAAKAAVA"
     gene            complement(21833..22468)
                     /gene="nth"
                     /locus_tag="JNZ89_001046"
     CDS             complement(21833..22468)
                     /gene="nth"
                     /locus_tag="JNZ89_001046"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HAY8934983.1"
                     /translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD
                     VSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG
                     EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
                     EKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI"
     gene            complement(22468..23163)
                     /locus_tag="JNZ89_001047"
     CDS             complement(22468..23163)
                     /locus_tag="JNZ89_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HAY8934984.1"
                     /translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
                     TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
                     PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDG
                     ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAA
                     AERALPNGETGNV"
     gene            complement(23167..23787)
                     /gene="rsxG"
                     /locus_tag="JNZ89_001048"
     CDS             complement(23167..23787)
                     /gene="rsxG"
                     /locus_tag="JNZ89_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HAY8934985.1"
                     /translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKA
                     LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG
                     AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAV
                     KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE"
     gene            complement(23791..24849)
                     /gene="rsxD"
                     /locus_tag="JNZ89_001049"
     CDS             complement(23791..24849)
                     /gene="rsxD"
                     /locus_tag="JNZ89_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HAY8934986.1"
                     /translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL
                     VQILLASVSTLLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT
                     VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ
                     VIFSGHTASGADMNTLHLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA
                     GWQWVNLAWLAGGLWLLWQKAIRWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLS
                     GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT
                     VPLIDYYTRPRVYGHRKG"
     gene            complement(24850..27072)
                     /gene="rsxC"
                     /locus_tag="JNZ89_001050"
     CDS             complement(24850..27072)
                     /gene="rsxC"
                     /locus_tag="JNZ89_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HAY8934987.1"
                     /translation="MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFV
                     IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSA
                     LAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQG
                     GGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKP
                     QAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV
                     GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDARFCPSADQM
                     VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLL
                     PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE
                     KRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT
                     QPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARA
                     KARKLEQQQANAEPEEQVDQRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAIE
                     AAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAVPEEQVDP
                     RKAAVEAAIARAKARKLEQQQTNAEPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED
                     "
     gene            complement(27065..27643)
                     /gene="rsxB"
                     /locus_tag="JNZ89_001051"
     CDS             complement(27065..27643)
                     /gene="rsxB"
                     /locus_tag="JNZ89_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HAY8934988.1"
                     /translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEIL
                     PQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE
                     LTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
                     CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA"
     gene            complement(27643..28224)
                     /gene="rsxA"
                     /locus_tag="JNZ89_001052"
     CDS             complement(27643..28224)
                     /gene="rsxA"
                     /locus_tag="JNZ89_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017456621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HAY8934989.1"
                     /translation="MTDYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
                     TTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL
                     LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFTAIRERLAV
                     ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
     gene            complement(28301..28741)
                     /locus_tag="JNZ89_001053"
     CDS             complement(28301..28741)
                     /locus_tag="JNZ89_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2569 domain-containing protein"
                     /protein_id="HAY8934990.1"
                     /translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF
                     QTLGGQALTTQILWGVSFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV
                     KAFAFSPVEDGIAVRQLLFTLLATALIVSYFKRSSRVKATFVNP"
     gene            complement(28827..29042)
                     /gene="ydgT"
                     /locus_tag="JNZ89_001054"
     CDS             complement(28827..29042)
                     /gene="ydgT"
                     /locus_tag="JNZ89_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription modulator YdgT"
                     /protein_id="HAY8934991.1"
                     /translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD
                     HRRAELVSGGRLFDLGQVPKSVWHYVQ"
     gene            complement(29315..29440)
                     /gene="blr"
                     /locus_tag="JNZ89_001055"
     CDS             complement(29315..29440)
                     /gene="blr"
                     /locus_tag="JNZ89_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division septum protein Blr"
                     /protein_id="HAY8934992.1"
                     /translation="MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK"
     gene            29653..30693
                     /locus_tag="JNZ89_001056"
     CDS             29653..30693
                     /locus_tag="JNZ89_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY8934993.1"
                     /translation="MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVK
                     ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
                     QARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR
                     DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY
                     PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD
                     GVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGI
                     ESAKHRATLCLA"
     gene            complement(30728..31729)
                     /gene="add"
                     /locus_tag="JNZ89_001057"
     CDS             complement(30728..31729)
                     /gene="add"
                     /locus_tag="JNZ89_001057"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HAY8934994.1"
                     /translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLI
                     PHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPG
                     YMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR
                     DQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAER
                     IGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGIN
                     TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK"
     gene            complement(31832..33004)
                     /gene="malY"
                     /locus_tag="JNZ89_001058"
     CDS             complement(31832..33004)
                     /gene="malY"
                     /locus_tag="JNZ89_001058"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional maltose regulon transcriptional
                     repressor/cystathionine beta-lyase MalY"
                     /protein_id="HAY8934995.1"
                     /translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP
                     CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE
                     LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK
                     PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS
                     NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA
                     HIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNID
                     DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR"
     gene            complement(33014..34606)
                     /locus_tag="JNZ89_001059"
     CDS             complement(33014..34606)
                     /locus_tag="JNZ89_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS maltose transporter subunit IICB"
                     /protein_id="HAY8934996.1"
                     /translation="MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSS
                     HDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGF
                     VGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM
                     LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINS
                     AGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQTQLSC
                     PTTHGFSESATRFLSQGKMPAFLGGLPAAALAMYHCARPENRHKIKGLLISGLIACVV
                     GGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHG
                     LSTKWYMVPVVAAIWFVVYYAIFRFAITRFNLKTPGRDSEVASSIEKAVAAAPGKSGY
                     NVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQV
                     VIGPQVQSVKDEMAGLMHTVQA"
     gene            34781..35809
                     /locus_tag="JNZ89_001060"
     CDS             34781..35809
                     /locus_tag="JNZ89_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mal regulon transcriptional regulator MalI"
                     /protein_id="HAY8934997.1"
                     /translation="MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAA
                     IEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG
                     GKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVD
                     TVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSD
                     WVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDR
                     YFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGTTLADRMMQKITHEETHSRNLII
                     PARLIAAK"
BASE COUNT         8990 a         9225 c         9338 g         8327 t
ORIGIN      
        1 aaagggataa aatagcaaaa gcgtgatgaa aatgttattt tccgatgccg cactgacccg
       61 ctacaatgtc agattactgc cgtaaagaag tttgaggaag caagacaatg agcaccacta
      121 tcgaaaaaat ccaacgccag attgctgaaa acccgatcct gctgtacatg aaaggttcac
      181 cgaaactgcc gagctgcggt ttctctgccc aggcagtcca ggcgcttgcc gcatgtggcg
      241 aacgttttgc ctatgttgat attctgcaga atccggacat tcgtgcggaa ctgccgaaat
      301 atgctaactg gccgaccttc ccgcaactgt gggttgacgg cgagctggtc ggcggttgtg
      361 atatcgtgat cgaaatgtat cagcgtggcg aactgcagca gctgatcaaa gaaactgccg
      421 ctaaatacaa gtctgaagag ccggacgcgg aataatccgt cctgcaatac tgacggatgc
      481 gaacgggcat ccgtcagtcc tttctctatc cccaatccag cccttgtggc gaacttgaaa
      541 atcccgcctc acgcagcagc gtaaacatcg gcgtttgccg gaccggtaga tcattcactt
      601 ctgttagcgt aaagcgcagc cgtggttcgc gacgcagtgc ggtagtcagc gcgtggaaaa
      661 cctctggggc ttttcctgcc agaccagcat ttttttgcca ccttgcgcca gatagagtaa
      721 caatttgccg ctagaaacga ccaccagcgc acccgcccga cgcgttggaa ccagcgttgc
      781 cggatgtgca ggccagggca gaagatttcc ccacacatta gccggatcgt tggcagagag
      841 cgccactggt gtatagtggc gcgtttgcgt ggcttgtgtc gccagatcgc gccatcggtc
      901 aatagtcaga cgttcagcga attgcgcgcc acccagacct tctacaaaac gacctcgcat
      961 aattcgcccg gagtcttcca tacttcgaca aagcgtttgc atcgatggaa acccgccagg
     1021 gatattttcg gctatcaccg cctgacgact gatgatgccg tagcggtcga gcatattttc
     1081 cgccagcgcc agcatccttt cggtatcgtt tagtggctcc acctgcaata acgaccagcg
     1141 tccagccaga tttggtgtgt tgtaagatac cagcggcgag acgggttgcg catagacagg
     1201 acgtccacga cgagcccggt gactgcggcg agttgaggtg cgtgcgttgg aactgctgcg
     1261 ggtgagggcg cgtaacggtg cccaaatgtc gctggtgatg acgccttgcc agaccagcgc
     1321 ccataacgcc tcttgcaggg cagagagatc aaccgattcg ccgattttgt cgcgtatccg
     1381 ttggctgatt tgttgtgcaa accaggctcc tccgtcagcc agaacagcga ctatcgcttg
     1441 ttgcagcgcc gaacgattcg cctgatccgc ttcggcagga gtgaacgatt ctgcagcata
     1501 ttcctgtaga tgcagtgcca ccaggccgtc atcttcaccc agtttttttt gccccgacca
     1561 gataaccgca ccggttgcca gtaattcatc gagcatttct gacgaatagt cgcgtacgcg
     1621 ggcaggcagg atctggcttt cccagagtga ggcgggtaaa ccgactccgg caagctgttc
     1681 gatcacccgc atcacgccat ctacgccctc ataaacgcct ggcgatgttg aggcaaagag
     1741 cgccgggcta ccatcggtgg cgggtaatac gccctgacgt tccagcagca atcgcgcata
     1801 ggtcgtggct gcaacgggac gcgtcgcttc tctggcggct tgcagcgagc gcaaacgcag
     1861 acgacgaaat acttcatcgc tcacccagat gtcttgttgc agattcatca ccagaccctg
     1921 ttcacgcagt tgctgaagct gctcttcgac aatggcaata ccgagactaa actcatgagc
     1981 cagttgttca gccgtgacca gagcatgagc ccggagatag cgcagaaaga ggtcgcgaag
     2041 cgggtaactg actctatgta aataaatctc tggcaatgac tctggtagtc gtacgccgag
     2101 ggcatcacgc agcctggcgg catcatccat acaggcaaga cgctcctgtc cgctaatcat
     2161 cgctgggaag attcgtttta ctgcaagaag attttccaga tacgacgcaa cctcttcact
     2221 gctgcctgta tgccgttgcg ccaggtcttc aacggtcatt ggccccagtt cgcgcagcag
     2281 gtcgaacaat ccttcttcac ctttcgctct tctgccagga gccagtcgtt gcaactcttc
     2341 ttccacctgg cgaatgacct gcgggtcgag taattccccc ggatcgacct gtccgagtag
     2401 attgcgcagt aactcgctgt ccagcgacag tacggatgcc cggcgctctg ccagcggggc
     2461 gtcgctctgg tacataaatt ccgcgacata gccgaacaat aaacttgtgg cgaaaggcga
     2521 gggcgtagtg gtcgttacat cggatatttg aatttcgcca ccgttcaggc gacgcatcaa
     2581 acgttccagt gcgggaagat cataaacatc ttgcagacat tcgcgtagga tttcgagaat
     2641 gaccggaaaa tctggatatc cctgagcgat ttccagcaac tgactggcgc gcagccgttg
     2701 ttgccaaagc ggggtgcgat ggcccggagt gcgccccggc attaataatg cccgcgcggc
     2761 gcattcgcga aaacgggcgg cgaaaagtgc cgagctgcct accgcctcgc ggacaatttg
     2821 cagcaacttt tctggttcaa acaaaaaaat cgcggcgtcg ggcaatttac catcagtgtc
     2881 aggaatgcgc gcaacaatgc cgtcatcact ggcgaccaca gacgcgtcag cgcccagggt
     2941 tcatgcaccc gtcttccata gggagagtgc aaaataatac gccagtcgcc aatttcatca
     3001 cggcaccgtt cgaggaccag atggcgactc cccggaacga tgcccgtcgc gttgcgttgc
     3061 tcgtcaatca acccctgaat attggcgttc gtattttctt ctgccagcca cgggggaata
     3121 gtcccggaaa agaacgcgcc atccgccagt aaatgaagaa aatcgccgat catctcgcct
     3181 aattcagccg gacgtccgtt accttcacca cgccagaagg ggagccgggc agaacgaccc
     3241 ggagcaggag tcacaatcac ctgatcgcgg gtgatttgct ggatccgcca tgaggtagcg
     3301 ccgagagtga taatgtcgtt cacccgcgac tcatatacca tctcctcatc cagtttaccc
     3361 acccgccgcg aaccggcctt ttcttcacct tcgggtaata acacgctata catgccacga
     3421 tccggaatgg tgccgccgct ggtaaccgcc aacaattgag cgccaggtcg gacggtcaat
     3481 atcccggtct ccctgttcca gaccagtttg gggcgaaaag cagaaaaatc gccagaggga
     3541 tagcgcccgg aaagcatatc cagcgtggcg tcaaaaacac gtcttggcag atctttccac
     3601 ggtgcggcac ggcgtacgcg ggagtaccat tcgtctacct gtaatgcctc catcgccgcg
     3661 gcggcaacgg tttgctgcgc aaggacgtcg agtggattat gcggcggtgt caggttttcc
     3721 agcctgcctg cgaacataca ctctacaatg actgcggaat cgactaagtc acgccgggta
     3781 cgagggaaaa acagcccttt agatacaccg ccaacctgat gtccggcgcg accaatgcgt
     3841 tgtaacccac tggcaacaga aagcggcgtt gccacctgaa tcaccagatc cactgcgccc
     3901 atatcaatcc ccagttcgag actggaggtt gcgaccacgc agcgtaactc acccgatttc
     3961 agcgcctgct cggtgattgc tcgttgttct ttagagacgg agccgtggtg tgagcgggca
     4021 ataaaaacgt cgctactttg tacacggtta gaggttgcgc cggaggtcga ctcgaaatgg
     4081 gccgcatcaa cggcgataga cggggaacgc tgtaagcgtg cggcgtaaag ctcatttaat
     4141 cgtgccgtca gtttttccgc cagcccacgt gaattagtaa agacaatggt cgagcgatgg
     4201 cgcaacactt catcaaggat acccgtttca atatatggcc agatggagcc ttcccggccg
     4261 gcatggctgt cttcgccggt gctgctggcg accgatgaga catcatccat attggcgacc
     4321 ggtacgacaa ttcgtatctg cggatggcgc attgcgggcg ggttgactac cgtaaccggg
     4381 cgatcgccac caagaaaggc tgccacatcg ctggctgagc gcacagtggc agaaaggcca
     4441 attcgctgtg ctgaggtgtg gagcagcgca tcgagccgct ccagacttaa cgccagatgc
     4501 gcaccacgtt tactgcccgc taccgcgtgg acttcatcaa taattaccgt ttcgccgcgc
     4561 cgccgccgtt catcggcaat acccttcaac gggagctgca agttgcgctg aacgtcggtg
     4621 cccagagctt ttatcggtga aatatagagg atgcgtgagg ttttacgctt atgcgcctcg
     4681 cgggtatctt cgccgccttc gcggaagagc cgatcgaggg cgtagagaaa tgctgccagc
     4741 gttttcccgg agccggtcgg tgcaatcacc agcgcatgtt cgcttcgcgc cgccacatgc
     4801 caggtttgcg actggacagc ggtcggctgt ttaaaggcgc gaagaaacca gtcgcgggtc
     4861 gccggtgaaa acacgtccgg caggagcgat gaagggtctg gattatctgc cattaacgct
     4921 attccccgtg aatatcatgc aggatgcgtg gaatagcctc actatagatg cctgaatcat
     4981 tgcatgtcat caggcatcga ctcgattaca cctcttcggc ggcaggtagc ggccagcctc
     5041 ccagacgttt ccagcggttg acgatttcac aaaacagcac agcagtgcgt tcggtgtcgt
     5101 acagcgcgga gtgcgcctgg gtgctgtcga agtccatgcc agcggtctgg caagcctttg
     5161 acaatacggt ttgtccgagt gccagcccgg ccagtgcagc agtgtcaaaa gtggcgaaag
     5221 ggtggaacgg gttacgtttc agtgaggcgc gttctgcggc ggctatcata aagctgtgat
     5281 caaaattggc attgtgcgcc accataatgg cgcggttaca gccgctcgct ttaatacctt
     5341 tacgtacaac tttaaaaatt tcgtgcagcg cctcgtattc gctgaccgcg ctacgatcgg
     5401 gatcgttcgg gtcaatgccg ttgaaggcga gggcttctgg ttgcaaattt gcgccgacaa
     5461 atggttcgac gtggaaatgt aatgtggtgt ccggcatcag ccagccttgt tcatccattt
     5521 tcagggtgat ggcggcaatc tcaagcagcg catcggtttt ggcgttaaat ccggctgttt
     5581 caacatcgat cacaacagga taaaaaccac gaaaacggtc gcacagaccg gtaagttgag
     5641 cgttatcgga catctgattc tcttaatacg gataaattgc agcgcgcatt atgacaaata
     5701 ttacttgtcg atgcagtaaa gatgcgggcg cgatgagttc acgcccggca ggagattagt
     5761 tgcccagacc gcgaccggcg tctttctctt cgattaactc aattttgtaa ccgtccggat
     5821 cttccataaa cgcgataacc gtagtaccgc cttttaccgg acccgcttca cgggtcacgt
     5881 tacccccgtt ttgacggatt ttttcgcacg cttcagcggc gttatctacg ctaagcgcga
     5941 tgtgaccata agcagtgccg agttcgtatt tatccacgcc ccagttgtag gtcagttcaa
     6001 tcaccgcttc ttcggtttcc gggccgtagc caacaaacgc cagtgagtat ttgtattccg
     6061 ggttttcgct ggtacgcagc agtttcatgc ccagcacttt ggtataaaaa tcgatggagc
     6121 gttgcaaatc gccaacgcgc agcatggtat gaagaagacg catcttttta tcctcaaaat
     6181 ggctaacaga ttcaaaatgt tgttttagta tagcggcggc tttacgccgc tcgcaatgtt
     6241 ggattacaac gtcgggtaat cggtatagcc ttccgcgccg ccaccgtaga aactttcggc
     6301 acgctgtggg ttaagctcag ctttgcgctg caagcgggcg accagatccg ggttcgcaat
     6361 ccagtcacga ccaaatgcca ccgcatcaat taaccctttg ccgatcagcg tttcagcttt
     6421 ttctactgtg tatgcacctg cgccgataat cggaccgtgg aaacgggcgc gtactttttc
     6481 gcggaacgca tcagtatacg gttcaccccc cgcccaatct ggttctgaca tatgcagata
     6541 agcaatgccg cgtttaccca gttgttcaat cagatacagt gcatcggctt cttcattcgg
     6601 gccgttatcc gtgttctgga aagtaccgat tggcgaaatg cgaatgccaa tgcgatcggc
     6661 accccattct tcaatcccgg catcgaccac ttccagtacc agacgtgcgc gattttccac
     6721 gctgccgccg tactgatcgg tacgatggtt tgaagaagga gaaaggaact gatgcagcaa
     6781 ataaccgtga gcagagagga gctctaccag atcaaaaccg gcttcacgcg cgttagcaat
     6841 ggcctgacgg aaatcattga cgatacctgg aatctcttct agttcaagcg cacgcggcat
     6901 ggatgtttca acacggatcg cctgaccatt ttcatcgcgc agagaagtac gtgttcccgc
     6961 gctaagtgct gaaggcgcta ccggtgcctg accgccaggt tgcaggctgg cgtgagaaat
     7021 gcgtccggtg tgccacagct acacggccat atgaccattt tcagcatgaa cgccagcggt
     7081 gatttttttc catgcggcaa tttgctccgg actatggatg ccaggcgcac ctgcatatcc
     7141 ttttacctgg gcagaaattt gcgtggcttc actaataatc aaaccggcac tggcacgttg
     7201 gcgatagtat tccgccatca acggggtagg aatgtcaccc ggttcaatac tgcgcagacg
     7261 cgtcagcggt gccataaaaa tacggtttgc cgccgtgatc gcgcccactt tcagtgggga
     7321 atacagtttt tcagatgaca taaaggctcc cggtcgtctg gtgataaaaa atgcctgcta
     7381 aacggcaggc gtcgcaataa tgttttttac atgggccagc gcgttttcca gtggctcgaa
     7441 actgcgcgaa attttggcct gcagattcgc acccagccat agtgcgtaaa gcacttgtgc
     7501 ctgttgtagc ggttcgccac aaaaggttaa acaatggttc tcacggccat tttccagcgc
     7561 ctgagagagc agggcgatca cgccgcgagc acctttatcc atcgcgctgc gcatatcttc
     7621 tgacagatcg cacacttcgg cagagagttt tactgtcagg caaccactga tggttccatg
     7681 ttggcaaaac tggttcagtg tttgctggta ataagccagt atgcggtcgc ggtagttacc
     7741 ttcgccggat tgcagcaact cagtcagtcg ctggtgatat gcggtgtaat gacgctcaag
     7801 catggcaacg ccaaacgctt ctttagagcg aaagtagtga tagaaggacc ctttcggcac
     7861 ttcagcggtt tttagtaatt cgcttagccc catcccggtg aatccacgtt gcaggcaaag
     7921 ttgctcgccc gtcgccagga gatgttcgcg agtatcatgt tcggtgtgtt tgttcatgcg
     7981 ttggagtgta gtagaccagt cggtctagtg caagcaaagt tgctactttg gacattaaca
     8041 gcttcaataa tggtaataat cttatctgag gagggcgaag tggcggagca attagagttc
     8101 tttcccgtcc agagcccgtg ccggggaatt tgccagtctg acgaacgcgg gttttgtcgc
     8161 ggctgttttc gtagtcggga tgagcgtttt aactggaata aaatgagcga tggcgaaaaa
     8221 caagaggtgc tgcgcctttg tcggcagcga ttaatgcgca aattacgcgc aaataagcca
     8281 gcgtcatcag acgaaccgga gcaaccatca ctcttttgaa cctaatcttg cgtatactcc
     8341 tctcatatct gataagagga agcgattatg gttcagcgta ttactattgc gccgcaaggc
     8401 ccggagtttt cccgttttgt gatgggctac tggcgattga tggactggaa tatgtccgcc
     8461 cgccagctgg tcagttttat tgaagagcat ctggatctcg gcgtgaccac cgtggaccat
     8521 gctgatattt atggtggcta tcagtgcgaa gcggcgtttg gcgaggcact gaaactggca
     8581 cctcacctgc gtgaacggat ggaaatcgtc agtaaatgcg gtatcgcgac gaccgcgcgt
     8641 gaagaaaacg tcattggtca ttacatcact gaccgcgatc acatcattaa gagcgccgaa
     8701 cagtcgctaa ttaatctcgc gaccgatcat ctggatctgc tgttaatcca ccgaccagac
     8761 ccgttaatgg atgccgatga agtggcggac gcgttcaaac atctgcatca gagcggcaaa
     8821 gtgcgtcatt ttggcgtatc gaactttacg cctgcgcaat ttgccctgtt gcaatcacgt
     8881 ctgccgttta cccttgccac taatcaggtg gaaatatccc cggtgcatca gccgttactg
     8941 ctggatggca cgctcgacca actacaacaa ctgcgtgttc gtccgatggc gtggtcctgc
     9001 cttggtggtg gtcgtctgtt taatgatgat tatttccagc cgctgcgtga tgaactggct
     9061 gtggtggcag aggagttaaa cgcgggctcg attgaacagg tggtttacgc ctgggtatta
     9121 cgtttaccat cgcagccgct gccaattatc ggttcaggta aaattgagcg cgtacgggca
     9181 gctgtcgaag cagaaacact gaaaatgacc cgtcaacaat ggtttcgtat tcgtaaagcg
     9241 gcactggggt acgacgtacc gtaagcactt ttaggaatag ccgccgttca aaaatgtgtc
     9301 actggtttac acttattcag gaatgcacaa tgaacggagg tcctatgaaa cgttttagtc
     9361 tggctattct ggcgctggtt gttgcaaccg gcgcacaagc tgccagtgaa aaagtcgaga
     9421 tgaacctcgt cacgtcgcaa ggggtagggc agtcaattgg tagcgtcacc attactgaaa
     9481 ccgataaagg tctggagttt tcgcccgatc tgaaagcatt accccccggt gaacatggct
     9541 tccatattca tgccaaagga agctgccagc cagccaccaa agatggcaaa gccagcgccg
     9601 cggaatccgc aggcgggcat cttgatccac aaaataccgg taaacatgaa gggccagaag
     9661 gtgccgggca tttaggcgat ctgcctgcac tggtcgtcaa taatgacggc aaagctaccg
     9721 atgccgtcat cacgcctcgt ctgaaatcac tggatgaaat caaagacaaa gcgctgatgg
     9781 tccacgttgg cggcgataat atgtccgatc aacctaaacc gctgggcggt ggcggtgaac
     9841 gctatgcctg tggtgtaatt aagtaattaa gaggcctgcg taccttgcgg tggtgcttgc
     9901 tcaagttgcg aaagcgagca gtacagccgc cagacaattg ccgccagctc acgggcggca
     9961 ggttgatgat gacgggcaag gctgtcgcaa atccgctgta attcttcaag tgtggccgcc
    10021 agtgattttt gctgaacgcc acgctcactc atcactcccc gcaacagtga aatacagtta
    10081 tcccgtactc gcgataacgg atcggaacgc gattcccagt cgcgcaattg ccagacaaca
    10141 tgagaacagt tcagcagcac tacaccccag cgtaataacc aacggcgagc cagcgcatcc
    10201 tggctgttac tcaactgact gacgtgatga taagtgagcg attcaaattc gctttcactc
    10261 agtgttggat ggcggcttag ctgatcgaca aaatcccggc gcagcgcgcg aatatggcgg
    10321 cggcttttac gagcatccga tcctggacgc agaatggcga acgctagcca agccagcgca
    10381 acgccaacga tttttgccag attatcgtta agaaagtcag caaaatcata caccggggga
    10441 ttagtgacag cgataaacga acccataaaa acaatcagtt gcccccacag tgcggcaaat
    10501 ttgggcatct gcaatttaag aagctgcatt gtcgccagca gtggaaagag aaacagtaaa
    10561 aattgccaca gatcgctaat ctggaccatc aggccaaatt tgaccacaaa gctgaatagc
    10621 gaaagtaaca ccagcgtgcg catcagcagt gacaacgact taaacggtgc tgcgacggcg
    10681 gagtagagta cgcagctaat tgctgccagc attggcaccg gcatcctatt gcgatgcaat
    10741 actccatgcg ccaatcatca tcaacgtaca aaatgtacgc agcccgctcc acatagcttc
    10801 ggcgttgtcg gtatgacgag ccagagcgga tgtccgtgcg agtctggcat gatcatctac
    10861 accgctttgc agacgatgta attcctgact actttgcaga taaaggcggc aaaaataacg
    10921 tagtcgctgc cagaaggcga cgtgccggta gtcggcgacg ttggtcgggc gtagcggggc
    10981 gataatacgt gcgacggtgt aagcatctgt ttgcgaactg gcgagcgccg tcagcaattg
    11041 ttcgagaatt tctcgcgtgg cacctggcgg tgagggccag ttgagcaaca tacgtcgcag
    11101 gctggagatg acactggtca tacgtaattg ctggtggagt agcgcattaa ggcgcgcgtt
    11161 ttgctggcga aaacgatagt ggctccagaa agcctggata cgcagcaaat tcatggtcag
    11221 tatctgccca atccccccct catgtgctgc acgaatggca tcgtttgttt caggctgcca
    11281 gagtaaactg gcatgttcca gtaatcgggc gtgcatgttt ttcaatgcgg ttaaaagggc
    11341 tgtagcatcg gaactgctag gcaggatcat catcatcatg ccgccgcaca aaataccgac
    11401 tatcacctcg caaacgcgcg cctgagcgat atcctacagc tggctggcct cagtaatatt
    11461 aaccatcgga aaggcgatga tggcagccgt gtagccgcca gttgaaatgc atacgcgacg
    11521 ttattcgtga agtgcgcaca ggcccaggta caaaagccaa gccacgccga catgctcaat
    11581 agaaaaaacc acggctcatt gagcgtatgc ccggcaagaa gcagtgccgc aatggctccc
    11641 agtaaactgc cagcgatgcg tccgaggctt ttgctgatga caccgccaac ggtgggaaag
    11701 ctaaccactg cagccgaggt catcgcccaa tagggttcat ccagattcaa ataataggca
    11761 accgtcagcg ccagacacat ggcaatggta ttgcgtaacg cataacgcca ttgcgccagc
    11821 gtggccttga accagggcaa attgcgcaag gaccatgacg atgcgttcat tattgaccta
    11881 cggcaatgct acaggtggtg cccgacacca gcgtgacatc gcctggaact ttatccagcg
    11941 caaagcggac gggaacgcgt tgggcgagac gaacccaggg gacgttaggt ttcacatccg
    12001 gaataaggct tgagtcactt tcaacgcttt gatcataaat cgcccgaccg atactggaaa
    12061 cgtgaccccg taacgttttg ttatcactat agagggtaat ttgtgctggt gcaccttcgc
    12121 ggatatggcg caacttggtt tcttcaaaat aaccaatgac gtaaaacgag tggctgtcga
    12181 caagggcaaa cagcggtttc ccggtgtcag cgtaatcgcc gatgcgggta gtgaggttag
    12241 tcacccaacc actcaccggg gcgcgaattt ccgtttgcgc cagttgccat tgtgtctgtt
    12301 tcagcgtggc ctgtgcggca ttaacactgg cctgcatcgc tttaacattg aggttagcgg
    12361 tatcgagttc ttcggcagaa ataaaatttt gtgagagatg acgacgacga ttcgcttcgt
    12421 tattggcttt tgcgaggtca gattgcgctt tcgccagctg agcctgtgcg ttcagctcgg
    12481 cgatctgaaa gggcgtttta tcgatcgtga gcagaagatc ccccgcgtta accagttggt
    12541 tgtcttttat attcagctca acaatacgtc ccgacacctg tggggtgata gaaacctttt
    12601 ctgcgcgtat tttcccgtcg cgtgtccacg gagattgcat gtaataattc cacagccacc
    12661 atccggcaag aaccgcaact atcgctacaa tgattattga gaaatactta attgttttaa
    12721 ttgacatagt taccacgcaa tcagtattgc cagagcaagg caaacgcaaa tcgcaaacag
    12781 cgataaatcc atttacaagg gatgccagat gtcaccggcg tagatccagc cacgaagcag
    12841 gcggtgtacg acaagccaga tgacgaatcc aaacgcgaag gctttgaaaa acggaggaaa
    12901 atagacggac gcaccgaaca ccagatcttg taagggcaat cctgttgcat tgagcataaa
    12961 cttcacaaag tagattcctt tacgaccgaa tatattgcgt tagattaata aatattcttt
    13021 aagtgcgaaa aatttacgcg caatttctga aaaatatgtc tgacggtaac caaatgcagc
    13081 aatacatttg ttttagcaat aaaattgctg cacactattc taaaagccgc ataatatctt
    13141 agcaagctaa ttataaggag atgaaattgg aatcgccact aggttctgat ctggcacggt
    13201 tggtgcgcat atggcgtgct ctgatagacc atcgcctgaa accgctggag ttaacacaaa
    13261 cccattgggt tacgttacac aatatccatc agttacctcc agaccagtcg caaattcaac
    13321 tggcaaaagc gattggcatc gagcagccat cactggtccg tactctggac caactggaag
    13381 aaaaagggtt aatttcgcgt caaacttgtg ccagcgatcg tcgggctaaa cgtattaaac
    13441 tgacggaaaa ggcagagcca ctgatcagcg aaatggaagc tgttattaac aaaacccgcg
    13501 cggaaatatt acatggcatc tccgcagagg aactggagca actgattacg ctcatcgcaa
    13561 aacttgagca taatatcatt gagttacagg ccaaagggtg aaatgaaggg ggcgtgtggt
    13621 cagtaacctg accacacgca aacttattta gcgcggagaa acggtcacct gactgccatt
    13681 gctggccagt acgacacgtt ggcccggaga gaaacgagtg ttgccttgtt tctgtaccac
    13741 catgatggta ttaccatcgt ctttacgaat ttccagctcg acaccctgcg ttttgttcat
    13801 tgcactctgt acgccctgac cagctacgcc acctgcaaca gcgcctgctg cagtagccag
    13861 agaacgcccg gttccgccac caacagtatt ccccaggaaa ccaccaagaa cagcaccgcc
    13921 aattgcaccg ataacgttgg aatcatcacc gccctgaatc tgtaccggac gtacgttaac
    13981 gatggtgcca tagctgacat tctgtacttg tttcgcttca gaagcggtat aaacatcccc
    14041 tgacagggtg tcgttattaa cacaaccgac aagagacaga cctaccattg aaacaaccaa
    14101 tacgcgttta atcattgaaa aatctcctgt tcaccatgaa acgccacgca agcatccctc
    14161 atggtcaaag tatatggcat atgtgaatcc atggttacat gttctaccaa atatgagcaa
    14221 atcataatga aagtaggatc aaccaattat aaacaaaaca ttcatgatga ttattgattt
    14281 gaagataatg ttttactacc aacggtaaaa atcggtcatt ccgcatggta ttcacgaaaa
    14341 gtttatgttt gagtggtgcg caaacgtcag attgaaaaag gatgaactat gaaatcgggc
    14401 cgctttattg gcgttatgtc aggcaccagc cttgatggtg ttgatgttgt gttggcgaca
    14461 atagatgaac accgggtcgc acagctggca agcttgagct ggccgatccc ggtgtctctg
    14521 aaacaggctg tactggatat ttgccagggc cagcagctta cactttcgca gtttggacag
    14581 cttgatactc aactcgggcg actttttgct gatgcggtca atgccttgct taaggaacaa
    14641 aacctgcagg cgagagatat agttgcgatc ggctgtcacg gtcaaaccgt ctggcatgaa
    14701 ccgacgggcg tggcaccaca cactttacag attggcgata acaatcaaat tgtggcacgc
    14761 accggaatta cggttgtcgg tgattttcgc cgtcgcgata ttgccttggg aggacaaggc
    14821 gcaccgctgg tacctgcgtt ccatcatgcc ttgctggctc acccaaccga gcgacgaatg
    14881 gtgctcaata ttggcggcat cgccaatctg tcactgctca ttcctgggca gccggttggc
    14941 ggctacgata ccggtcctgg taacatgctg atggatgcct ggatctggcg tcaggccggt
    15001 aaaccttacg ataaagatgc cgagtgggca cgggcgggta aagttattcg cccactgctg
    15061 caaaatatgc tcagcgaccc atatttctcg caacctgcac cgaaaagcac cggacgcgaa
    15121 tactttaact acggctggct ggagcgccat ttacgccatt ttccgggtgt tgatccccgt
    15181 gatgttcagg ccacactggc agaactcacc gccgtgacca tttctgaaca agttttgttg
    15241 agcggtggct gcgaacgatt gatggtatgt ggtggaggta gtcgtaatcc gctactcatg
    15301 gcgcgtctgg cggcattact gccaggcaca gaagtcacca ccaccgatgc cgttggcatt
    15361 agtggcgatg acatggaagc attggctttc gcctggcttg cctggcggac gctggcggga
    15421 ttaccaggaa atctgccttc cgtcactggc gcaagccagg agacggtact gggggctatt
    15481 ttccctgcta acccgtgata tcagagttaa ctgaattttt cttaccgcgt ctgccgttac
    15541 acttggaacg ttagggaggg cgtattgccc tccagaccag gaaagtcttc gggaaatgtc
    15601 tatgaaaaaa ctgttactga tctgtttgcc ggtgcttctc accggctgta gcgcgttcaa
    15661 tcaactggtt gagcacatgc aaaccgctac gctggaatac cagtgtgatg aaaaaccgtt
    15721 gacggtcaaa ctgaataatc cgcgccagga agtcagtttt gtttacgata atcaactact
    15781 gcatctcaaa cagggcattt cagcgtctgg tgcacgttac actgacggaa tctatgtttt
    15841 ctggtcgaaa ggcgatgaag cgactgtcta taaacgcgac cgcatcgtat tgaataactg
    15901 tcagttacaa aatccacagc gttgagattt ttccaggggc ggcgcacaat agcgtcaccc
    15961 actgacaatc cgtaaagaaa accatgtctg ataacgacga attgcagcaa atcgcgcatc
    16021 tgcgccgtga atacaccaaa ggcgggttac gccgtcgcga tcttcccgcc gatccattaa
    16081 ccctttttga acgttggctc tctcaggcgt gtgaagccaa actggcagac cctaccgcga
    16141 tggtggtcgc taccgtggat gaacatgctc agccttatca acgcatcgtt ttactcaaac
    16201 attacgacga aaaaggcatg gtgttttaca ccaacctcgg tagccgtaaa gcacatcaaa
    16261 ttgaaaataa tccgcgcgtt agcctgctgt tcccgtggca tacccttgaa cgccaggtga
    16321 tggtgatcgg taaagcagaa cgactttcga ctctcgaagt gatgaaatat tttcatagcc
    16381 gcccgcgtga tagccagatt ggtgcatggg tttcgaagca gtccagtcgc atttctgccc
    16441 gcggtatcct tgaaagtaaa ttcctggagc tgaagcagaa gtttcaacag ggcgaagtgc
    16501 cattgccgag cttttggggc ggttttcgcg tcagccttga acagattgag ttctggcagg
    16561 gcggtgagca tcgcctgcat gaccgctttt tgtaccagcg agaaaatgat gcgtggaaga
    16621 ttgatcgtct tgcaccctga aaagatgcaa aaatcttgct ttaatcgctg gtactcctga
    16681 ttctggcact ttattctatg tctctttcgc atctggcgaa aagtcgtgta ccggcaaagg
    16741 tgcagtcgtt atatacatgg agattttgat ggcaagcagt aacttgatta aacaattgca
    16801 agagcggggg ctggtagccc aggtgacgga cgaggaagcg ttagcagagc gactggcgca
    16861 aggcccgatc gcgctctatt gcggcttcga tcctaccgct gacagcttgc atttggggca
    16921 tcttgttcca ttgttatgcc tgaaacgctt ccaacaggcg ggccacaagc cggttgcgct
    16981 ggtaggcggc gcgacgggtc tgattggcga cccgagcttc aaagctgccg agcgtaagct
    17041 gaacaccgaa gaaactgttc aggagtgggt ggacaaaatc cgtaagcagg ttgccccgtt
    17101 cctcgatttc gactgtggag aaaactctgc tatcgcggcg aacaactatg actggttcgg
    17161 caatatgaat gtgctgacct tcctgcgcga tattggcaaa cacttctccg ttaaccagat
    17221 gatcaacaaa gaagcggtta agcagcgtct caaccgtgaa gatcagggga tttcgttcac
    17281 tgagttttcc tacaacctgt tgcagggtta tgacttcgcc tgtctgaaca aacagtacgg
    17341 tgtggtgctg caaattggtg gttctgacca gtggggtaac atcacttctg gtatcgacct
    17401 gacccgtcgt ctgcatcaga atcaggtgtt tggcctgacc gttccgctga tcactaaagc
    17461 agatggcacc aaatttggta aaactgaagg cggcgcagtc tggttggatc cgaagaaaac
    17521 cagcccgtac aaattctacc agttctggat caacactgcg gatgccgacg tttaccgctt
    17581 cctgaagttc ttcaccttta tgagcattga agagatcaac gccctggaag aagaagataa
    17641 aaacagcggt aaagcaccgc gcgcccagta tgtactggcg gagcaggtga ctcgtctggt
    17701 tcacggtgaa gaaggtttac aggcggcaaa acgtattacc gaatgcctgt tcagcggttc
    17761 tttgagtgcg ctgagtgaag cggacttcga acagctggcg caggacggcg taccgatggt
    17821 tgagatggaa aagggcgcag acctgatgca ggcgctggtc gattctgaac tgcaaccttc
    17881 ccgtggtcag gcgcgtaaaa ctatcgcctc caatgccatc accattaacg gtgaaaaaca
    17941 gtccgatcct gaatacttct ttaaagaaga agatcgtctg tttggtcgtt ttaccttact
    18001 gcgtcgcggc aaaaagaatt actgtctgat ttgctggaaa taatgcatta agtggaaagg
    18061 gggagtgaga aatcactccc cctggttttt atacagggaa catgatgaaa aatattctcg
    18121 ctatccagtc tcacgttgtt tatggtcatg cgggtaacag tgcggcagag tttcctatgc
    18181 gccgcctggg cgcgaacgtc tggccgctga acaccgttca attttctaat cacacccagt
    18241 acggcaaatg gactggctgc gtgatgccgc ccagccattt aaccgaaatt gtgcaaggca
    18301 ttgccgccat tgataaatta cacacctgtg atgccgtgtt aagtggctat ctgggatcgg
    18361 cggagcaggg tgaacatatc ctcggtatcg tccgtcaggt gaaagccgcg aatccgcagg
    18421 cgaaatattt ttgcgatccg gtaatgggtc atccggaaaa aggctgtatc gttgcaccgg
    18481 gtgtcgcaga gtttcatgtg cggcacggtt tgcctgccag cgatatcatt gcgccgaatc
    18541 tggttgagct ggaaatactc tgtgagcatg cggtaaataa cgtcgaagaa gcggttctgg
    18601 cagcgcgcga actcattgcg caagggccac aaattgtgtt ggttaaacac ctggcgcgag
    18661 ctggctacag ccgtgaccgt tttgaaatgc tgctggtcac cgccgatgaa gcctggcata
    18721 tcagccgtcc gctggtggat tttggtatgc gccagccggt aggtgttggt gatgtgacga
    18781 gcggtttact gctggtgaaa ctgcttcagg gggcaacgct gcaggaggcg ctggaacatg
    18841 tgaccgctgc agtctacgaa atcatggtga ccaccaaagc aatgcaggaa tatgagctgc
    18901 aagtggtggc tgctcaggat cgtattgcca aaccagaaca ttacttcagc gcaacaaagc
    18961 tctgaaatat ctcatttcgg cccacaacga cctgtgggcc gatggctatt actttaagcc
    19021 ttccgctgac agtgcgtctt gtacttccgg acgttcagcc atacgttgca taaatgctgc
    19081 aatgtgctct aacccttcca gattcagttt caccgcgtat gcccagcgca gaaccgtaaa
    19141 cagataggca tcagcaattg taaatctttg cccgcagatc cagtgctcat ccttcagtgt
    19201 ctcgttcaca tattgcagct tcttctccag ctgcgcgcga actgtcggtt tgtactcttc
    19261 cggtgtatca gggcgaaaca gaggtgtgaa acctttatgc agctcggtgg cgatgtaatt
    19321 cagccattcg atggttttat agcgggaaat actgtttacc ggtgccagca actggcggtc
    19381 ggggacgctg tcggcaagat actgcataat cgctacgcct tccgtcagca aagtaccgtc
    19441 atccagcagc aatgcaggca cctgcccctt agggttaacg gcaaagtaat cgtcaccgtt
    19501 ttcgagacgt tttttcatta aatccacact gacgagggta aaatcctttc cgctctcacg
    19561 cagggtgata tgggaagcga gagagcaggc acccggtttg tagaacaatt tcatcggtaa
    19621 ctccttttgt ctgtggttta aagtatggta gtgcgttgct gaacaaaaaa aaagccgcta
    19681 acgaaaagtt agcggcttgt aaaagagttt ccctaaattt tacgctacag cagctttcgc
    19741 cgctttgtct gcagcgtcat cctgcgtcat acggtgcagt ttaggcgcgg tcagcagcat
    19801 cagtactgca ataatggcag tagcgacacc aatctgcaag aatacgcgac cataaacttc
    19861 cagtgacatc agcgggtcgg taacgttatc cggcacagcc atcatacccg caacataacc
    19921 accaatcagg tttgcaccgg cagtggtcag gaaccagcta cccataatga agcccatcag
    19981 acgctgcgga acgagttgtg caaccattgc cagacccaga ccagagatca tcagttcccc
    20041 gatgctctgc aggccatagc ttgcgaccag ccagcttaca gacacgatac cagcgtcaga
    20101 cgcgaatttc gcacccagcg gcagaatcag gaacgcacca gaacacatca ccatgccgat
    20161 tgcaaacttg gttggcatcg gcagggtatc gcccatcttg ttatagatag cggccagaat
    20221 cggactaccg atgatgatcc agaacgggtt cagtgcctga tactgctcag gttctacggc
    20281 cagacccaga atggagtgct caacgttacg aatcgcaaag aagttcagtg acgttggcat
    20341 ctggctgtac agcacgaaga agataatggc ttcgagcatc aggatgaagg caacgatcat
    20401 tttacgacgc gcagcacctt tcatcgcgaa ggcttcttta ccgaagataa ccacgatacc
    20461 gaaggcaaca acgcccagcg ccatacgcgc aacttcctga ttgtgcagca gccaggtggc
    20521 gatagcgatc agtgccacaa caccaataat ggtcagtagc aggttacggt agttgatagg
    20581 ctcgaagtct ggttttgaac cgtactgttt aacccagcgt tggcagaagg cgaagttaac
    20641 gatagtgatc agcaggccta caacgctcaa cgcaaacgca acactccagc cgtatttcgc
    20701 ggccagccac ggcgtagcaa tcatagagaa gaaagagccg atgttgacgg acatgtagta
    20761 catggtgaat gcaccgtcca gacgcgggtc gtttttctca tagcatgtag aaagcagaga
    20821 agacgggtta gctttaaaca ggccgttacc gaccgcaata gccgccatac ccatataaac
    20881 gataccggcg tcgtgaccag accaggcaac cagagcataa ccaatcgcca gcacaatagc
    20941 gccgagcata attacgcgtt tagtacccag taccttgtca cctaaccagc cgccgatagc
    21001 gaccagacca taaaccaggg cactaaagga agagaaaagg gtgattgaat ccgcttcaga
    21061 catacccagt tgtttaacca ggtaaacagc cataattcct tgtaggccgt aataaccaaa
    21121 acgttcccat aactcaatcg agaagatgag atagaacgcc ttcggttgtt tgaaagcgtt
    21181 caaactgacg ctttcagttg gtttttggtt tgcagtggac acttttacct ctttttttac
    21241 atcccatatt aacgggggtg ctttctcgcg ttatgtctaa aaaacatacg cgcaattgtt
    21301 atagtgggag gggaaacggc aggtaatgtt cactatcttg cactttcaga caagtccttt
    21361 gtaataattt gttacatata actgaggcgg ggaattcaac cattccggga aatgttatcc
    21421 agcgttaaat ttttcaaaaa acgtaacggc agattttttc actgcactga gaggggggtg
    21481 atggcttaac ggcgatatgt tctgctattt agcgttttta ctagtgagat agtccggttt
    21541 ctgaaaaata gccagtgtaa tgttttgtag gtcaatattt gttgcgtgtg taaatttaaa
    21601 tgattttaac ctgattcttg caatgttttt acattgcgac agcatcgtga tcttgatcac
    21661 gaatgaatag aaaatttcgc tattaaaaaa acaattaacc tgcatttttg gttatccgca
    21721 aacggattac ctgatgataa cgctaagcaa tggcatcatt cacgttaaaa agatgtttta
    21781 aaagaggata aagaaaggtt atcaatgggg taatcggtgt tacccctttt cttcagatgt
    21841 caactttctc tttgtattca caaagatctt caataataca agagccacag cggggcttgc
    21901 gggcaatgca ggtataacgc ccgtgcagga tcaaccaatg gtggcagtcg actttaaact
    21961 ctgccggaac cactttcagt agcttttctt ctacctgttc aacgtttttc cccggcgcaa
    22021 attgagtacg attacaaacg cggaaaatgt gcgtgtcgac agcaatagtc ggccagccga
    22081 atgcagtgtt taatacgacg ttggctgttt tacgacctac gccgggcagg gcttcaagcg
    22141 cagcacgatc ttccggaacc tcgccattat gctgctccag taagatacgg caggttttga
    22201 tgatattttc tgctttgctg ttataaagcc caatcgtttt gatataggtt ttaacccctt
    22261 caacgcccag ttcaagcatc gctgcaggcg tattcgccac cgggtagagt ttcgccgtcg
    22321 ccttattaac actgacatcg gtcgcctgag cggaaagcag tacggcaatc agcaattcaa
    22381 aaggcgaact gaaattaagc tcggtggtgg gatgaggatt gttctcacgc aggcgagtga
    22441 ggatctccag gcgttttgct ttgttcatca gacattccct gtttcaccgt ttggcaatgc
    22501 acgttcggca gctgcttcag tacggcgctt tttcattctt tcatcaatca ggtattttcc
    22561 tgccagcatc agtcccaggc caataaatgc acctggtggc agcatcgcca gcaggaaagg
    22621 ggagtcggtg tggaaaatct ccacgcgtaa tacttttgcc cagctaccta acagcgcatc
    22681 tgcaccgtca aacaatgtgc cattgccgat aatttcgcgt agtgaaccca gcacgaacat
    22741 ggcgcaggtt gcgcccatac caattgaaaa gccgtccagt gccgaaagcg ccggaccttt
    22801 tttggcggcg aaggcttcag cgcggcccac aacgatacag ttagtgacaa tcagcggaat
    22861 aaaaatccct aatgattgat acaggccaaa ggcgtaggcg ttgatcagca tctgtacagc
    22921 gctgaccacc gaggcgatga tcatcacgta aatgggaatg cggatctcgg ctggcgtcca
    22981 gtgacgcagc gtcgaaatgg tcaggttggt cagcgtcagt accagcgtag tcgcaagtcc
    23041 taaacccaga gcattagtgg cagtggacgt gaccgccaac agaggacaaa ggccgagcaa
    23101 ctggaccagc gcagagttgt ttttccacaa cccctgaaca ataacgtctt taatttcgct
    23161 cacgctttat tctccacagg caggaagttg agaaagttgt gccggtaacg tctgagcgta
    23221 caatccggcg cgttttaccg cattaaccac cgcgcgggga gtaatcgtcg cgccggtgaa
    23281 ctggtcgaaa tcaccaccat ctttcttcac cgcccagtgc gcatcatccg caccactgat
    23341 ttttttaccc gcaaaatggg tgatccagtc agaaaggcgc agttcgattt tatcgccaag
    23401 ccctggcgtt tcgtggtgct ctgtcacgcg cgtgccaagt accgtgccgt taaaatcggc
    23461 tcccaccagc agctgaatcg caccggaata gccatctggc gcggttgctt ccagaacggc
    23521 ggctaccggt ttgtcatcct gtttggcgat gtaaacccga tgctcacctt tacctaactc
    23581 tggcgcagtt accagatagc aactctgtgc cagcgcattg ttatagcgtt cggctggcag
    23641 cacctgatca aataatgcct tttgttgcag acttgcctgt tcagcaatcg tcgttttggt
    23701 catctggttg atggccgcag ttaaccctgt tgaacccgct gcaaatagcg ctaacgtaat
    23761 gccgtgtttt cggatagttt tcagcatggt ttaccctttg cgatggccgt agacgcgcgg
    23821 acgcgtgtag taatcgatca gaggaaccgt gatgttcgcc agcaggacgg caaaagccac
    23881 gccgtcagga tagccgccga aactgcggat caaccagact aataagcccg caagcgcgcc
    23941 gaaaataaga cgaccacgat tggtcgtaga agcggtaacc gggtcagtca aaataaagaa
    24001 tgcgccgagc atggtcgcac cagacagcag atgaatttgc ggtgctgcca gtgtttctgg
    24061 tgagaacaac cagcccaacg ttgcgcataa cgccagcgtt actaagaagc tgaggggaat
    24121 atgccagcga atcgctttct gccatagcaa ccacaggccg ccagccagcc aggcgagatt
    24181 tacccattgc caaccagcgc ccgccagaat accgctgtag atcggatatt gcataatctg
    24241 ttcaaccgaa tgaccggcac ggacagaggt tttaaatgta tccagcggtg tcgcctgact
    24301 aatgccatca atacctaagt gtagtgtgtt catatcagca ccactggcgg tatgcccgct
    24361 gaaaataacc tgtatggcgt cgataaaacc agggatgttg accgcaattt catgtggcgg
    24421 taaccagctg gtcatctgca ccgggaagga gatcagtaag accacataac caatcattgc
    24481 cggattaaac gggttttgcc ccagaccgcc atacaactgt ttagcgatga tcaccgcaaa
    24541 caccgtaccc agcacgacca tccaccatgg cgcgaggggg ggaatactta ccgccagcaa
    24601 taagcctgtc agcaatgctg agttatcttt caacgttgcg gctaccgact gcttgcgtag
    24661 tttgagtacg agagcttcgg ctaacagagt actaaccgat gccaacagga tctgaacgag
    24721 agtaccccaa ccaaaaaacc acagttgcgc tgcgattcct ggcacggctg cgagcaacac
    24781 caacagcata atgcgcgatg tctggcgctg gttatgggta taaggggagc tagctattct
    24841 gaataccatt tagtcctcgt ttacaacctt ttgctgggcg gcttttttgg cctgagcgcg
    24901 ggcaatagcc gcggcaactg ccgctttgcg cggatcaacc tgttcttctg gttctgcgtt
    24961 agtctgttgc tgttccagct tgcgcgcttt ggcacgggca atagcggctt cgacggcggc
    25021 tttgcgcgga tcaacctgtt cttcaggtac cgcattagcc tgttgctgtt ccagcttgcg
    25081 tgctttggcg cgtgcaatag ccgcttcgac ggcagctttg cgcggatcaa cctgttcttc
    25141 tggctccgca ttagcctgtt gctgttccag tttgcgcgct ttggctcggg caatagcggc
    25201 ttcgatggcg gctttgcgcg gatcaacctg ttcttctggt tccgcattag cctgttgctg
    25261 ttccagcttg cgcgctttgg cacgggcaat agcggcttcg acggcggctt tgcgctgatc
    25321 gacctgttct tctggttccg cattagcctg ttgctgttcc agcttgcgcg ctttggcgcg
    25381 ggcgatagct gcttcaacgg cagttttacg tggatcagca acggttgctg cgtcgttagt
    25441 ttgctgcagt tctgcctgtt tcgctctggc ttgcgcttta cgggcttccc gtgctgcaat
    25501 aattgcactg ttatccgggc gttcgcccgc tttaatcaca ataggctgtg tagcctgggc
    25561 ctgtttctct ttcacccgcg ccagagcggc agcaatcgca tctttatctt tggctgcagg
    25621 ttgaacggct gcgctcttat gtcgttcaag gcgagccgct ttttcgcgct ccagacgagc
    25681 ctggcgcgct tcgaaacgcg ctttggcttc tgcggcgcgc ttttcttcct gacgaatagc
    25741 cgcaatttca gctttttcct gacggaaata ttgcaccagg ggaatattgc tcgggcaaac
    25801 ccacgcgcaa gccccacatt caatgcaatc agcaatgtta tgcgtggtag ctttatcgtg
    25861 ttgctgacct ttgctgaacc agtacaactg ttgcggcaaa agatccgcag ggcaggcgtc
    25921 agcacaggcg ctacaccgga tgcagctttg ttcttcctgt ggttcgccaa gttcattggc
    25981 agagggagcc aacagacagt tggtaatctt tacgaccggg acatccagcc atggcaaggt
    26041 aaagcccatt agcgggccac ccataatcac catttgatcg gcagaggggc agaatcgggc
    26101 atcattcaat aaatgacgca ctggcgtccc cagccgtgcc cagacgttgc ccgggcgagc
    26161 gattgcttcg ccagtcaggg ttacaacacg ctcggtaatc ggctcgccat caataacggc
    26221 acgtttcact gcataagcag tgccgacgtt ttgcattaat acgccgatat cggatgaacg
    26281 cccgccatgt ggaacctgct tcccggtcag aatgtaggtt aattgtttag caccgccaga
    26341 aggatatttg gttggaatca cccgcagaga aatatcgtta gagtccgcca gcaccgcgcg
    26401 cagcatggaa atcgcctgcg gtttgttatc ttcaatgccg ataagaattt cgcgtggctg
    26461 cagaatatgc gcaagaatgc gaataccctc tacgacctga gccgcgcaat cctgcatcaa
    26521 acggtcatcg gcggtaatgt acggctcgca ctcagccgcg ttgataatca acgtttcaat
    26581 cttatctccg ccaccctgca atttaacgcc tgtcgggaat cctgcaccgc ccagcccggc
    26641 aacaccaaac tgatgtatgc gctcgattaa ctcttcgcga ctacgagtgc gataatcggc
    26701 ccagccgtcg cgcgggatcc agcagtcttc accatcggca tcaataatca cgcttaattc
    26761 agctaaagct gaaggatgag ccgtagagtg gggcgcaata gccgtaacgg tacccgaggt
    26821 gggcgcgtga acaggcagca ttttgccgcg accacgggta agcggctggc cgcgcaatac
    26881 tttatcgccg acgctaacgc acaactcacc ttcagcgcca atatgctgtt tcagtggaat
    26941 aacaaaacgc tgcgccagtg gtacctggcg caggggtgta ccgttggact gggttttcat
    27001 ctccggtgga tggatgccgc cgttgaaatc ccagatttta ttttttctga atgcagagaa
    27061 taacttaagc atggtgttcc acgggaatga tacgcacggg aatggtgttc agatcccatt
    27121 tccaggagtc aggtgtttct gcgaccggtt gcaacgagat gcagtgcgtc gggcacggat
    27181 caacacataa attgcagccc gtacagagat cactcattac cgtatgcatg gcacgggtag
    27241 cgccaacgat ggcgtctacc ggacaagcct gaatacattt agtgcagcca atacagttat
    27301 tttcatcaat aaccgccacc atccgcgcag gcgttagctc ttgcgcttcg ccatccagcg
    27361 gctgcggctc gacattaagc aactcggcaa tttttagcat cacagcttcg ccacctgggg
    27421 cgcaacggtt gattttttca ccgttacagc tgatggcttc cgcgtagggg cgacagccgg
    27481 gataaccgca ctgaccacac tggctctgcg gtaagatttc gtcaattttc tcaacgaccg
    27541 gatcgtcttc caccgcaaaa cggcgggagg cataacccag aatggcgcca aacgccaggc
    27601 ccagcaggct cacggcggca acggcaatcc agatagcatt cattacaact tcaccaaacc
    27661 actaaagccc ataaaggcca gagacataag acctgcggta attaacgcaa tggcattacc
    27721 gcgaaaaggt gccgggacat cagccacagc aaggcgttcg cggatggcgg tgaagagcac
    27781 catcaccagc gagaaaccga cagcggcgga aaaaccgtac agcgccgact gcaagaaatt
    27841 gtgcccgaga ttgatattca gcaacgccac gccgagcact gcacagttgg tggtgataag
    27901 cggcaaaaaa atccccagca gacggtaaag caccgggctg gttttgcgca ccaccatctc
    27961 ggtgaactgc acgaccacag caatcaccag aataaatgcc agggtgcgca ggtaaatcag
    28021 attaagtggg atcaaaatcc acgtatcgat aagccaggcg caaatagacg ccagcgtcat
    28081 cacaaacgtt gttgccagcc ccatgcccat cgcggtttcc agttttttgg aaacccccat
    28141 aaacggacag agaccgagaa acttgaccag cacaaagtta ttgaccagta cagttccgac
    28201 aaacagtaac aggtagtcag tcatttttcg gcctgaaata aaaaagccgc ctattatccg
    28261 ttaatccaga gcaggcgaca acaggttaac tgtaaggtta ttacggattc acaaacgtcg
    28321 cttttacccg cgacgagcgt ttgaaatagg agacgatcaa tgcggttgcc aacaaagtaa
    28381 acagcaactg gcgaacggct atgccatctt ccacgggtga aaaagcgaat gcttttactg
    28441 ccagcaatac ggaaataagc agccagataa tatagtgttt aggaacacaa cgccgacgtt
    28501 taaagaaagc gatggtcaac cacagtgtgt aataccacat ggcgatagcg gtaataaaag
    28561 aaacgcccca taagatttgt gtcgtcagtg cttgtccgcc gagcgtttga aatgtttgcg
    28621 gagaagataa cgcagcggta tacagcaaca acgccagcgt cgtactcaac agagcgacta
    28681 aaagccaggc caacgggcca agcaaccagc ctccaatacg ttgtggcgtt gtggtggtca
    28741 taggttctcc agaatagcga cgcaaacagg caaatctaat tttaggggcg ttattataag
    28801 gcttttataa ccgatcgcta ctttctttat tggacatagt gccagacgga cttcggtacc
    28861 tggccgaggt caaacaaacg cccgccagaa accagctctg cgcgacggtg atcggcagca
    28921 cgatacatat tgatcagttc ctgatcgtcc gtcagggtgt aattaagatg gtcgtagagt
    28981 ttttccagac tttcgagtga actgattttg cgaaatttta ataagtagtc ctgaacagtc
    29041 ataaaaggtc cataaaataa ttaataccaa aggggtaggt attattagtg atgataaaat
    29101 ttcaccaaaa gtgaacgctt gtgttattac aataataaga atgcgctgat ggcaaatatt
    29161 cagggatgaa aaactgctct gaaaagagta acgcgcttta ctatccctga caatcaccaa
    29221 caacatcgaa caagataata aattcctggt ttaatatccg acaagtgaaa acatgcaacc
    29281 ggacgggcag catggcgctc tacaagcgca gagcttactt gtgttgtacc gaagcactct
    29341 gttcaggtgg ctgatagttg tcaatgtgac tcgccacgcc aagaagaatg actgaaacga
    29401 caagaacgat ccaacctgtt aattcaataa gacgattcat tacagcccac atctctcttg
    29461 attgatccat taacttcagg gggtaaatgt tacttagcaa taatagctcc agcaagattt
    29521 ttactgaggt ttttgcgata tttagctttt gtcgttggaa aattcgctat ttttttgact
    29581 taatattaaa ctgttgagcg tgggtaaagg atagtgtcaa atagcaatca tacttcaatg
    29641 agaggcaatg acatgagcga caacatccgt gttgggttga ttgggtatgg ttatgcgagc
    29701 aaaaccttcc atgcgcccct gattgcgggc acgcccgggc tggaactggc ggtaatctcc
    29761 agcagtgatg aaacaaaagt aaaagccgac tggccaacgg ttacggttgt ctctgagccg
    29821 aagcatctgt ttaacgatcc caacatagac ctgattgtca ttcctacacc caacgatacc
    29881 catttcccgt tagccaaagc ggcgcttgag gcgggtaaac atgtggtcgt tgataaaccc
    29941 tttaccgtga cactgtcaca agcgcgagag ctggatgcgc tggcaaaaag cctggggcgt
    30001 gtgctgtctg tattccataa ccgtcgttgg gatagcgatt tcttgacgct aaaaggtttg
    30061 ctcgcggaag gcgtgctggg tgaagttgct tactttgagt ctcattttga ccgcttccgt
    30121 ccgcaggtgc gcgatcgttg gcgtgaacag ggcggcccag gcagcggtat ctggtacgat
    30181 ttagcaccgc atcttcttga tcaggccatt acgctatttg gtttaccggt cagcatgacg
    30241 gtagatttgg cacagttacg gcccggagcg cagtcgaccg attatttcca cgccatcttg
    30301 tcctatccac agcggcgagt cattttacac ggtaccatgc tggcagccgc tgagtcagca
    30361 cggtatatcg tgcatggatc ccgaggcagt tatgtgaaat atggcctcga tccacaggaa
    30421 gaacgtctga aaaatggcga gcgtctgccg caggaagact ggggctacga tatgcgtgat
    30481 ggcgtactta cccgcgtgga aggtgaggaa cgtgtcgaag aaacgctgtt gacggtacct
    30541 gggaattatc cggcttacta tgcggctatt cgtgatgcgt taaatggcga tggtgaaaat
    30601 ccggttccgg caagccaggc aatccaggta atggagttga ttgagctggg catcgaatcc
    30661 gccaaacatc gcgcgacttt gtgccttgca tgaaaaatgg atggtgcaat ttgcaccatc
    30721 cattttgtta cttcgcggcg actttttctc gcagtgcgcg tttttcctca gcgctgagga
    30781 aagccatttc cagaccatta atctgtgcct ggcggatttg ctcgcgggat aacccagcag
    30841 ctggcgcggc aacggtatat tcgtgaatga tatccactcc ctgtacgccg ggatcgtcag
    30901 tgttaatgcc ggcacgaatg ccatgctcaa ggaacgtttt cagcggatgt gcagccagct
    30961 ctgctacggt gctggtctga atattggagg tcagacagga ttcaatacca atttgttgct
    31021 cggcgagaaa atccatcagc gcccgatctt caatggcttt tacgccatgt ccaatacgct
    31081 ccgcacccag ttcacgaatc gcctgccaga tgctttccgg cccggcagct tcgcctgcat
    31141 ggacggtaat atgccagccc gcatcacgcg caaggttgaa gtgagaaagg aacagacttc
    31201 ccgggaaacc aagttcatca ccggctaaat caagggcggt aatctggtca cggtgggcta
    31261 aaaaggcctc cagctcttgc tgacaggcgg cttcgccgaa ggttcggctc ataatgccga
    31321 taagcttcgc ctgcacacca aaagtgcggc aaccttcacg tacgccatcg atcaccgctt
    31381 cgacaacacc cgctacaggc agcttatgtg ccattgccat gtagcctggt gaaaaacgca
    31441 gctcgacata gtgcaggccg ttacgggctg catcttcaat gttttcaaat gccacgcggc
    31501 ggcaggcatc aagagaggcg agaactttaa cgccccagtc aagtttggtc agaaagctca
    31561 ccagatcggg ttcgttggca atgacctgaa cgtggggaat cagtgtttcc agggattgtg
    31621 caggaagcga gatattatac tggcggccaa gttcaagaat ggtctgggga cgaatgttgc
    31681 catcaaggtg gcgatggata tcagttaatg gcagggtggt atcaatcatg gtcgcactct
    31741 ttttctggat ataaaagtgc gcaccattat aaaaacaaag cagggtaaaa atccacgatt
    31801 gcgcaacgat ttttacgttg cgcaattggg gttaacgaac agcgcggatg gcgttaatta
    31861 atccagccac acctttttcc agtttcgaac gtgggcagcc ggcattgaga cggacaaaac
    31921 cacgaccttc ttcaccgtag gtataccccg gcatgatcgc gactttttct tgttcgataa
    31981 gtgctttttg caacgcgttg tcgtcaatat tcaacggacg taaatcaagc catgccagat
    32041 aagtggattg tgggatctgc cagttgagtt caggaaacgc ggcgttcatt ttatctgcga
    32101 tatacgtcag gttatctttc agatagatgc gtaaggcatc cagccacggc gcgccttgct
    32161 gataggcggc gatatgggca gttaacgcca gtaccgaagg ggaagaaagc ccatcacggc
    32221 ctttcagtgc cgataaatag gcatcgcggc tactgctatt ttctataatc ccgtaagcac
    32281 cggtcagggc gggaatattg aaacttttcg agcccgacgt tagcaacgcc cagtctccgc
    32341 gagccacatt actccaggga atatgcggct gctcgcccca aaccatatcc atatggattt
    32401 catcggaaat aacccgcaca ccatgacgct cgcacaggtc agccatgatc tccagctcat
    32461 cgcacgtcca cactttcccg gtaggattct gtgggctaca caggagcata attttacatt
    32521 ctggtttcgc caacacggct tccaacttgc ccatatcgca aaaccaacca tcagcctgct
    32581 tctctaaagc aacgggcatt actgtgcgct ggttaccttc aatggccttg taaaatgcgt
    32641 cataggcggg tgtgtggatc accacgcctt cacctgtttc agaccactga cgaatcagtt
    32701 ctgaaaccat atagatgaca gaagggccat acaccaccgt ctgagaatcg atggcggtgt
    32761 aatgctgggt ggaaaaccag tgggcaatag cagcgagaaa ctcatcgttt ttccagcggc
    32821 tgtagccaaa tacgccgtgc atcaggcgct gattcagcgc ctctataatg cagggggcag
    32881 tggcaaaatc catgtctgaa atcgtgaacg gtaacaggtc agcagtgccg aaacggtcag
    32941 cgacataatc ccactgtgta caccatgtgc catgacgatc cacgaccttt gaaaaatcga
    33001 acatatctta tccttatgcc tggacagtat gcatcagacc ggccatttca tcttttactg
    33061 actgaacttg tggcccgata acaacctgca ggttatgttg attaagttgt actacgccaa
    33121 ttgcccgatt gtccttcagt gcctgcacat taacaagcga catatctttc acagacaaac
    33181 gcagacgggt aatgcagtta tcgaggctga caatattgtc ggcaccgcct aatgcttcga
    33241 ggattgcagg aacgttgtaa cctgatttac ccggcgcagc ggcaacggct ttttcgattg
    33301 agctggcaac ttcgctatcg cgccccgggg ttttgagatt gaagcgggtg atagcgaaac
    33361 ggaagatggc gtagtaaacg acaaaccaga ttgccgccac cactggcacc atgtaccact
    33421 tggttgacag accatgcaaa ataccgaaca ccacgaagtc gatgatattg ccgtcggtat
    33481 taccgatggt gacgccgagc acagacatga cggtgaagcc gaggccggtt aacagcgcgt
    33541 ggatgacata cagaactggc gctacgaaca ggaacaggaa ttccagcggt tcggtagtgc
    33601 cgccaacgac gcaggcgatc aggccagaaa tcagcagacc tttaatttta tggcgatttt
    33661 ccgggcgcgc gcagtgatac atagctaacg ctgcagctgg cagaccgccg agaaacgcag
    33721 gcattttacc ttgcgaaagg aaacgcgtgg cgctttcaga aaaaccgtga gtggtcgggc
    33781 aactcaattg cgtctggaag atggtcagtg cgccgctgac ggtttgaccg cagacttcct
    33841 gcgtgccgcc tgcgtcggta aagcgaatta atgccaccag aatgtgatgc agaccaaacg
    33901 gcaacagcag acgttcaccg gtaccaaaca gcatcggtcc gaaatcaccc gcgctgttta
    33961 tcatatggcc caagccgcta atacccatgg cgaaaatcgg ccagactaat ggaatcacca
    34021 ggccgacaag gcccatcacc agcgaggaga taattggtac gaagcgcgta ccgccgaaga
    34081 atgccagcgc atccggcagg cggatattat ggaaacgctc atgcagcatc cagacgataa
    34141 taccggcgat caccgcaccg aggatcccgg tatcgatcga ctggatccca agaatgctct
    34201 ggatgttatt ggctttcaga accgcggcat ccgtggttgg cagaatgcct ttattggtca
    34261 accagaagtt taccgcgagg ttcattaccg cataaccgac gaagccagcg aatgccgcta
    34321 cgcctttatt ttcgcgtgcc aggcccagcg ggatggcgat acagaacatg acaggcagga
    34381 aactaaaagc aaacgagcca atcttactca tccaggtaaa gatagcctgc aacacggggt
    34441 tgcccaggac cgggatcagg gttatgacat catggctgct aagagaacta ccaatgccga
    34501 gcataatgcc gcagaacgac aataatgcca cgggtaacat gaaggttttg cctaactgct
    34561 ggaagaactc ccacagcgtg actttcggtg ctgttttcgc cgtcataaaa cgactcctcg
    34621 tagagaacaa tctggattca gtaaattgcg cgagaagata aaacgtttta tcaaatttta
    34681 gtgaggcata aatcacatta cgcaacgata atagcgggta taagataaat aaaaggtaaa
    34741 acgttttatc tgtcacataa tcagggagta ggtcatctgc atggctaccg ccaaaaaaat
    34801 aaccattcat gatgttgcgc tggctgcggg cgtgtcggta agtaccgttt cgctggtgct
    34861 tagtggcaaa gggcgaatct ctaccgccac aggagaacgc gttaacgccg ccattgaaga
    34921 gctgggattt gtgcgcaatc gccaggcgtc ggcgctgcgc ggcgggcaaa gcggcgtcat
    34981 tggtttgatc gtccgtgatt tatctgcgcc gttttacgcc gaattgacgg ccggattgac
    35041 ggaagctctg gaagcgcagg gacggatggt ttttttgctt cacggcggta aagacggcga
    35101 gcagctggca cagcggtttt cactgttact gaatcagggg gtcgatggtg tggtaattgc
    35161 cggggctgca ggaagcagcg atgacctgcg acggatggca gaagaaaaag ctatcccggt
    35221 gattttcgct tcccgtgcca gttatcttga tgatgttgat acggttcgcc cggacaacat
    35281 gcaggctgca cagttgttga cggagcatct cattcgcaat gggcatcagc ggatcgcctg
    35341 gctgggaggg caaagttcct cattaacccg ggcagaacgg gtgggaggct attgtgcaac
    35401 tctactaaaa tttggtctgc cgtttcacag cgattgggtg ctggagtgca catccagcca
    35461 gaagcaagct gcggaagcta tcacggcgct tttacgtcat aacccgacca tcagtgctgt
    35521 ggtttgctat aacgaaacta ttgcgatggg ggcatggttt ggtttgctga aagcagggcg
    35581 gcaaagcggg gaaagcggag tcgatcgtta ctttgagcaa caagtttcgc tggcggcatt
    35641 taccgatgcg acaccaacca cacttgatga tatacccgtt acctgggcca gcacgcctgc
    35701 gcgggaactt ggtaccacac ttgcggatcg catgatgcaa aaaatcaccc atgaagagac
    35761 gcattcacgc aatcttatta ttcccgcccg gctcattgca gcgaaataat cctctcttta
    35821 tctgctatac ctggtagtgt cctttcctca aggttaatga taaaaaatgt ggcacacagg
//
LOCUS       DADMIB010000022        35637 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.022, whole genome shotgun sequence.
ACCESSION   DADMIB010000022 DADMIB010000000
VERSION     DADMIB010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35637
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.022"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(144..1403)
                     /locus_tag="JNZ89_001061"
     CDS             complement(144..1403)
                     /locus_tag="JNZ89_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8934998.1"
                     /translation="MPKLTDMQIRAWIKSGERFEGRADGNGLYLRYREADKTPTWRFR
                     YKLAGKSRAMLIGSYSELSLSKARETAKELSARVALGYDVAGEKQKRKTEALAKMEAE
                     KNAMRVSELAAEYFERQILPRWKHPDILRRRIDKDINPCIGSMKVEDVKPRHIDDMLK
                     GIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVADAGGKEAARDRWLTRD
                     ELIQLFKAMRTAKGFSRQNEITFKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERS
                     KNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPARKMQNRMIPHIQESTLPVALAKVR
                     AEMPDVPNFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRHQYFDERKA
                     ALAQWADLLVALESGKDYNVTPLRRAN"
     gene            complement(1594..2457)
                     /locus_tag="JNZ89_001062"
     CDS             complement(1594..2457)
                     /locus_tag="JNZ89_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HAY8934999.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRSRLTRGKVECTLRYEPDISAQGELILNEKLAKQLVTAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            2584..3300
                     /gene="rph"
                     /locus_tag="JNZ89_001063"
     CDS             2584..3300
                     /gene="rph"
                     /locus_tag="JNZ89_001063"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HAY8935000.1"
                     /translation="MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVA
                     AVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLL
                     ALARGGIESIVATQKAALAN"
     gene            3366..4007
                     /gene="pyrE"
                     /locus_tag="JNZ89_001064"
     CDS             3366..4007
                     /gene="pyrE"
                     /locus_tag="JNZ89_001064"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HAY8935001.1"
                     /translation="MKPYQRQFIEFALGKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGLEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEA
                     KDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERG
                     RGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV"
     gene            complement(4044..4640)
                     /gene="slmA"
                     /locus_tag="JNZ89_001065"
     CDS             complement(4044..4640)
                     /gene="slmA"
                     /locus_tag="JNZ89_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HAY8935002.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLAS
                     QILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(4747..5205)
                     /gene="dut"
                     /locus_tag="JNZ89_001066"
     CDS             complement(4747..5205)
                     /gene="dut"
                     /locus_tag="JNZ89_001066"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HAY8935003.1"
                     /translation="MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELA
                     PGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVW
                     NRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ"
     gene            complement(5183..6403)
                     /gene="coaBC"
                     /locus_tag="JNZ89_001067"
     CDS             complement(5183..6403)
                     /gene="coaBC"
                     /locus_tag="JNZ89_001067"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HAY8935004.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGM
                     ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEGLASRGLLIWGPDSGSQACGD
                     IGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAA
                     VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNV
                     EEYARQKRIRKNLDLICANDVSQPTQGFNSENNALHLFWQDGDKVLPLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            6575..7243
                     /locus_tag="JNZ89_001068"
     CDS             6575..7243
                     /locus_tag="JNZ89_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HAY8935005.1"
                     /translation="MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTL
                     AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL
                     SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAI
                     KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE
                     RGWI"
     gene            7460..7696
                     /gene="rpmB"
                     /locus_tag="JNZ89_001069"
     CDS             7460..7696
                     /gene="rpmB"
                     /locus_tag="JNZ89_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HAY8935006.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRVIDKKGIDTVLAELRARSEKY"
     gene            7717..7884
                     /gene="rpmG"
                     /locus_tag="JNZ89_001070"
     CDS             7717..7884
                     /gene="rpmG"
                     /locus_tag="JNZ89_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HAY8935007.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            7982..8791
                     /gene="mutM"
                     /locus_tag="JNZ89_001071"
     CDS             7982..8791
                     /gene="mutM"
                     /locus_tag="JNZ89_001071"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HAY8935008.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRL
                     SDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKV
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK"
     gene            complement(8830..9309)
                     /gene="coaD"
                     /locus_tag="JNZ89_001072"
     CDS             complement(8830..9309)
                     /gene="coaD"
                     /locus_tag="JNZ89_001072"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HAY8935009.1"
                     /translation="MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKP
                     MFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQL
                     AHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA"
     gene            complement(9317..10594)
                     /gene="waaA"
                     /locus_tag="JNZ89_001073"
     CDS             complement(9317..10594)
                     /gene="waaA"
                     /locus_tag="JNZ89_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HAY8935010.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRH
                     PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQ
                     HVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSA
                     AGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQVLLQQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRS
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            11007..12065
                     /gene="rfaQ"
                     /locus_tag="JNZ89_001074"
     CDS             11007..12065
                     /gene="rfaQ"
                     /locus_tag="JNZ89_001074"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HAY8935011.1"
                     /translation="MDKLFRRILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQ
                     DTIPILSENPEINALYGIKNKKAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAI
                     LVRLLNARVKISQDYHHRQSAFWRKSFTHLVPLQGGNVVESNLSVLTPLRVDSLVKQT
                     TMSYPPASWKRMRRELDHAGVGQNYVVIQPTARQIFKCWDNAKFSAVIDALHARGYEV
                     VLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVTFPELGALIDHAQLFIGVDSAPAHI
                     AAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYREMPTRDQRDRNEMYLSVIPAAD
                     VIAAVDKLLPSSTTGTSL"
     gene            12062..13186
                     /locus_tag="JNZ89_001075"
     CDS             12062..13186
                     /locus_tag="JNZ89_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HAY8935012.1"
                     /translation="MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGE
                     YPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYHLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEAL
                     ASLPDSLRHNTLLYVVGQDKPRKFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAEPFRQETLNEILRKA
                     LTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG"
     gene            13179..13976
                     /gene="rfaP"
                     /locus_tag="JNZ89_001076"
     CDS             13179..13976
                     /gene="rfaP"
                     /locus_tag="JNZ89_001076"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312532.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HAY8935013.1"
                     /translation="MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAG
                     KSYFLKWHRGTTLKEIIKNLLSLRMPVLGADREWSAIHRLRDVGVDTMYGVAFGEKGI
                     NPLSRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINH
                     RDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGL
                     TQRDIWRFMKVYFAAPLKDILKQEQGLLSQAEAKATKIRERTIRKSL"
     gene            13992..15008
                     /gene="waaO"
                     /locus_tag="JNZ89_001077"
                     /gene_synonym="rfaI"
     CDS             13992..15008
                     /gene="waaO"
                     /locus_tag="JNZ89_001077"
                     /gene_synonym="rfaI"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     3-alpha-galactosyltransferase"
                     /protein_id="HAY8935014.1"
                     /translation="MSAHYFNPQEMINKTIIFDERPAASVASSFHVAYGIDKNFLFGC
                     GVSITSVLLHNNDVSFVFHVFIDDIPEADIQRLAQLAKSYRTCIQIHLVNCERLKALP
                     TTKNWSIAMYFRFVIADYFIDQQDKILYLDADIACQGNLKPLITMDLANNVAAVVTER
                     DANWWSLRGQSLQCNELEKGYFNSGVLLINTLAWAQESVSAKAMSMLADKAIVSRFTY
                     MDQDILNLILLGKVKFIDAKYNTQFSLNYELKKSFVCPINDETVLIHYVGPTKPWHYW
                     AGYPSAQPFIKAKEASPWKNEPLMRPVNSNYARYCAKHNFKQNKPINGIMNYIYYFYL
                     KIIK"
     gene            15025..16020
                     /locus_tag="JNZ89_001078"
     CDS             15025..16020
                     /locus_tag="JNZ89_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,2-glucosyltransferase"
                     /protein_id="HAY8935015.1"
                     /translation="MNEFIKERFSYLADNKKENAPELNVSYGIDKNFLYGAGVSISSV
                     LINNSDINFVFHVFTDYVDDDYLKSFNETAKQFNTSIIVYLIDPKYFADLPTSQFWSY
                     ATYFRVLSFEYLSESISTLLYLDADVVCKGSLKPLTEIIFKDEFAAVIPDNDSTQAAC
                     AKRLNIPEMNGRYFNAGVIYVNLKKWHEANLTPYLLKLLRGETKYGSLKYLDQDALNI
                     AFNMNNIYLAKDFDTIYTLKNELYDRSHRKYQQTITDKTVLIHYTGITKPWHSWAGYP
                     SASYFNIAREQSPWKKYPLKEARTVAEMQKQYKHLFAHGEYIKGITSLIKYKLKK"
     gene            16030..16722
                     /gene="rfaY"
                     /locus_tag="JNZ89_001079"
     CDS             16030..16722
                     /gene="rfaY"
                     /locus_tag="JNZ89_001079"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /protein_id="HAY8935016.1"
                     /translation="MITSIRYRGFSFYYKDNDNKYKEIFDEILAYNFKTVKVLCNIDD
                     TKVSLIDTKYGRYVFKVFAPKTKRNERFLKSFVKGDYYQNLIVETDRVRSAGLTFPND
                     FYFLAERKIFNYASVFIMLIEYVEGVELNDMPIIPENVKAEIKASMEKLHALNMLSGD
                     PHRGNFIVSKDGVRIIDLSGKSCTAERKARDRLAMERHLGIANEIKDYGYYSVIYRTK
                     LRKFIKKLKGKA"
     gene            16748..17773
                     /locus_tag="JNZ89_001080"
     CDS             16748..17773
                     /locus_tag="JNZ89_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactose--(galactosyl) LPS
                     alpha1,2-galactosyltransferase"
                     /protein_id="HAY8935017.1"
                     /translation="MDLLAESITEVAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQS
                     VVMHNPDLAVKFHLFTDYIDEDYLQRVNAFTSKNANVEVIIYKVSNAFIDIFPSLKQW
                     SYATFFRLVAFQYLSETIENLLYIDADVICKGSLAGLLDINFDEDKFAAVIKDVPFMQ
                     EKPAKRLAIEGLPGNYFNAGVVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDI
                     LNILFFGHCNFISGDYDCFYGIDYELKNKSDEDYKKTITDDTKLIHYVGVTKPWNDWT
                     NYPCQKYFNEAYQASCWNDVAFIPATNEKQYQVKYQHAKKNGDTFNAFIYFIKFKLNK
                     YKRKLFG"
     gene            17858..18841
                     /locus_tag="JNZ89_001081"
     CDS             17858..18841
                     /locus_tag="JNZ89_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HAY8935018.1"
                     /translation="MSNDYPLVSIIIPTYNSSDYITETLTKLEKQTYPNFEIVIVNDG
                     SKDNTSNVLREYGLTHSRLIIVNKENGGVSSARNTGIRKAQGQFICFMDDDDEIDPNY
                     LLKMYTRQHETGGDAIYCGLYGHYIKDGVTYSPINTEFNEGSLLFDFFYKKVRFHIGC
                     LFIRKQLLEENNLFFDEDLRLGEDLDFIYRLLITCDMYAVPYYMYKHNYRENSLMNSC
                     RTITHYRHESFAHERIYSSVMQLYKGNRKEEIHTLLSQNRAYHKTRYLWNVLLNGDFK
                     LLNQLVESNEKELRDCNLPGKRDKRRAKILASKNYILWRMVRLVNRKKNKR"
     gene            18887..20140
                     /locus_tag="JNZ89_001082"
     CDS             18887..20140
                     /locus_tag="JNZ89_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012602581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HAY8935019.1"
                     /translation="MSFCWNEINSGIKSLILILCIFSLMTLSLWDDVATKFLHAAGII
                     SALYFLATPKKTITNNPTLLIFISLCLLGIVNIIWYSHYKVSGSVYTNAYRGPMETGK
                     IALCSAFIFLVLFAKNEMRTKIKFGKLILFASLATQLLFFAHAMWQHFYLNVDRVALS
                     ASHATTAGYIILFPSLLASILILKSDFRHKTTLYTINFMLSLCAVIVTETRAAILVFP
                     FFALILIVMDSYINKRINYKLYCFIAIALLAGVFSFKDTLLMRMNDLNNDLVNYSHDN
                     TRTSVGARLAMYEVGLKTYSPIGQSLEKRAEKIHELEEKEPRLSGALPFVDSHLHNDL
                     IDTLSTRGIPGVVLTILAFSAILIYALRTAKEPYILILLFSLLVVGLSDVILFSKPVP
                     TAVFVTIILLCAYFKAQSDQYLLDK"
     gene            complement(20210..21181)
                     /gene="rfaC"
                     /locus_tag="JNZ89_001083"
     CDS             complement(20210..21181)
                     /gene="rfaC"
                     /locus_tag="JNZ89_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HAY8935020.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI
                     PSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAAL
                     VTRLAHGVKHGLDWQTAREPLASLFYNCKHHIAKQQHAVERTRELFAKSLGYSKPQTQ
                     GDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWG
                     APHEEERAKRLAEGFDYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKRFIEENAAMI"
     gene            complement(21185..22231)
                     /gene="rfaF"
                     /locus_tag="JNZ89_001084"
     CDS             complement(21185..22231)
                     /gene="rfaF"
                     /locus_tag="JNZ89_001084"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HAY8935021.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGI
                     PHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQL
                     QVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
                     FGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVA
                     AALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQR
                     VLEELNTLLLQEEA"
     gene            complement(22241..23173)
                     /gene="rfaD"
                     /locus_tag="JNZ89_001085"
     CDS             complement(22241..23173)
                     /gene="rfaD"
                     /locus_tag="JNZ89_001085"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HAY8935022.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LDIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     DVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFT
                     QADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            23387..24583
                     /gene="kbl"
                     /locus_tag="JNZ89_001086"
     CDS             23387..24583
                     /gene="kbl"
                     /locus_tag="JNZ89_001086"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HAY8935023.1"
                     /translation="MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEMVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
                     QLGVIA"
     gene            24593..25618
                     /gene="tdh"
                     /locus_tag="JNZ89_001087"
     CDS             24593..25618
                     /gene="tdh"
                     /locus_tag="JNZ89_001087"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HAY8935024.1"
                     /translation="MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKE
                     NLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
                     KVILSWD"
     gene            25857..26891
                     /gene="waaH"
                     /locus_tag="JNZ89_001088"
                     /pseudo
     CDS             25857..26891
                     /gene="waaH"
                     /locus_tag="JNZ89_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418072.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronate:LPS(HepIII) glycosyltransferase"
     gene            complement(26878..27837)
                     /locus_tag="JNZ89_001089"
     CDS             complement(26878..27837)
                     /locus_tag="JNZ89_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312519.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HAY8935025.1"
                     /translation="MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVL
                     AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
                     IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
                     MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPLTVRVL
                     QQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPV
                     YANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN"
     gene            complement(27841..29124)
                     /gene="envC"
                     /locus_tag="JNZ89_001090"
     CDS             complement(27841..29124)
                     /gene="envC"
                     /locus_tag="JNZ89_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HAY8935026.1"
                     /translation="MRGKAINTMTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADE
                     RDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNK
                     QIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQCGQRLQAYF
                     GYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKK
                     TLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEA
                     TRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIG
                     ASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQ
                     PIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR"
     gene            complement(29134..30678)
                     /gene="gpmM"
                     /locus_tag="JNZ89_001091"
                     /gene_synonym="pgmI"
     CDS             complement(29134..30678)
                     /gene="gpmM"
                     /locus_tag="JNZ89_001091"
                     /gene_synonym="pgmI"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HAY8935027.1"
                     /translation="MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH
                     TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGA
                     VDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
                     SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADT
                     AVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVN
                     ADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISET
                     EKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKY
                     DTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQ
                     MRDPATGQAHTAHTNLPVPLIYVGDKNVKAVAGGKLSDIAPTMLSLMGMEIPQEMTGK
                     PLFIVE"
     gene            30923..31354
                     /locus_tag="JNZ89_001092"
     CDS             30923..31354
                     /locus_tag="JNZ89_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HAY8935028.1"
                     /translation="MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGE
                     ATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDG
                     SGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK"
     gene            31496..31747
                     /gene="grxC"
                     /locus_tag="JNZ89_001093"
     CDS             31496..31747
                     /gene="grxC"
                     /locus_tag="JNZ89_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HAY8935029.1"
                     /translation="MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM
                     IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK"
     gene            31810..32277
                     /gene="secB"
                     /locus_tag="JNZ89_001094"
     CDS             31810..32277
                     /gene="secB"
                     /locus_tag="JNZ89_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HAY8935030.1"
                     /translation="MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDL
                     DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYC
                     PNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
     gene            32277..33296
                     /gene="gpsA"
                     /locus_tag="JNZ89_001095"
     CDS             32277..33296
                     /gene="gpsA"
                     /locus_tag="JNZ89_001095"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HAY8935031.1"
                     /translation="MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATL
                     ERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPD
                     ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
                     QTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
                     ITRGLAEMSRLGAALGAEPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSA
                     QEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKD
                     ERSSH"
     gene            33376..34197
                     /gene="cysE"
                     /locus_tag="JNZ89_001096"
     CDS             33376..34197
                     /gene="cysE"
                     /locus_tag="JNZ89_001096"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HAY8935032.1"
                     /translation="MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSA
                     LSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
                     LYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHAT
                     GIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGA
                     KIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI"
     gene            complement(34250..34723)
                     /gene="trmL"
                     /locus_tag="JNZ89_001097"
     CDS             complement(34250..34723)
                     /gene="trmL"
                     /locus_tag="JNZ89_001097"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HAY8935033.1"
                     /translation="MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
                     RRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPE
                     TRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD"
     gene            complement(34889..>35637)
                     /locus_tag="JNZ89_001098"
     CDS             complement(34889..>35637)
                     /locus_tag="JNZ89_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY8935034.1"
                     /translation="QTTQASNRIRGLLTQIHPALERVLGPRLEHPAVLDLLQRYPSPE
                     KLASLGEKKLAAQLCKLAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLPRLALQLI
                     TLRKQRDEVALEVEQRVLAHPLYPVLTSMPGVGVRTAARHLTEVACRAFASAAHLAAY
                     AGLAPVTRRSGSSIRGEHPSRRGNKALKRALFLSAFAALRDPLSRAYYTRKMSQGKRH
                     NQALIALARRRCDILFAMMRDGTFYTPQGS"
BASE COUNT         8868 a         8479 c         8960 g         9330 t
ORIGIN      
        1 ggctgctctg ttaagcctga aaaaaggggc gggtggtaat tttttcattg tgtcaccttt
       61 tacgctgcgc cttattttgt gattgagcca ggcggtaagg cttcccgctt ttcgccccgt
      121 cgagctaggc tcaatctatt cagttagttc gcccttctga gaggcgttac gttgtagtct
      181 tttccgcttt ccagtgccac cagcagatca gcccactgtg ccagtgctgc tttacgctca
      241 tcaaaatact gatggcggtt ataaatcccc tctacgccct taatgcgatg attgaggcat
      301 cgttccgcca caacaggatc aacacccaac gctgctaaat gagtacgtgc ggtgcgtcga
      361 aagtcgtgaa tcgtgaaatt aggcacatcc ggcatttcgg cgcgaacctt agccagtgct
      421 acgggtaaag tgctttcctg aatatgtggg atcattctgt tttgcatctt cctggccgga
      481 agcacccatg cgctattaca tgaaaaggtg tgtagctctc tcaaccattc aacggctggg
      541 gaaggtagag gtatatcaat agggtctccg tttttgctgc gttcttccgg caaatgccat
      601 accgcaccat ctaaatcaaa ctcttcccat cgtgcggcgc ataattccat tttgcggacg
      661 cataacgcta acagtaattt gaacgtgatt tcgttctggc gactgaatcc cttagccgtg
      721 cgcatggctt tgaatagctg gattaactca tcgcgggtta accagcggtc acgggcagct
      781 tctttccctc cggcgtctgc cacctcaaag gctgaacagg ggttaatctc tagcgcgtgc
      841 cgtttgattc cgtagtcgaa tatgcggcgc gtccatctca gcacgtccgt tgctatggtc
      901 ggcgctccac ggtcaacaat acctttcagc atgtcatcga tatggcgcgg tttcacgtcc
      961 tctaccttca tgctgccaat gcaggggttt atatctttgt cgatacggcg gcggagtata
     1021 tcggggtgct tccagcgcgg gaggatctga cgctcaaagt attcagcggc aagctctgaa
     1081 acgcgcatag cgttcttctc tgcttccatc ttcgccagtg cttcggtttt gcgcttctgc
     1141 ttctctcctg caacgtcata gcccagcgca acgcgagccg atagctcttt ggctgtctct
     1201 ctggcctttg atagtgatag ctcgctatac gaaccaatta gcatggcgcg ggacttccct
     1261 gcgagtttat agcggaatct ccatgtgggg gttttgtcgg cttcacggta acgtaggtat
     1321 aaaccgttac cgtctgcccg cccctcgaat cgctctccgc tcttaatcca tgcgcggatc
     1381 tgcatgtctg ttagttttgg cattttgcga atatccaaac tttgaatagg gggtgtaccc
     1441 aaagcaatgt acccaaacct cattgggtac acctttgtgt acaccataat catgcgcttt
     1501 gttgcgtctt tatgatagcc catgataaca aaaaagcccg ctgggttgcg ggcttggtgt
     1561 gatttatgcg tcgtcctaaa tgttgctgat agcttactcg atattctgaa tctgctcgcg
     1621 catctgctca atcaacactt tcagctcaat cgcggagttt gtcacttcgg cattgataga
     1681 cttcgacgca agagtgttcg actcgcggtt gaattcctgc atcataaagt ccagacgacg
     1741 accaacggct tcttttttct tcagaatgtt gtaggtctct ttgacatgcg cttccaggcg
     1801 gtccagttct tcggcaacgt caattcgttg tgccagcaga accagctcct gctccagacg
     1861 gttgttttcc aactgaacct gagcatcttc cagcttcgcg accagacgct cacgctgcca
     1921 ttgcaggatt tccggcatat gggcgcggac tttgaccact tcggcggtga cgccttccag
     1981 acgctgctcg atcaatgctt tcagtgcctg accttcggtt tcgcgcgcga caataaagtc
     2041 gtccagcgta ccatccagcg ccgcgagaat ttcagcggca atggcgtcaa gatcctgctc
     2101 ctgggctgcc atcacgcccg gccagcgtag aatatcaacc gggttgattt ccccttcgtc
     2161 actctgcatt tttacccagt tcgcggcagt taccagctgt ttagccagtt tttcgttgag
     2221 gatcagctca ccttgcgcgc taatatctgg ctcatagcgc agggtacatt ccactttacc
     2281 gcgcgtcagg cgagaacgaa tacgctcgcg aacgacaggt tcaaggctac ggaactgctc
     2341 cggcagacga aagtaagttt ccagataacg ctggtttacc gagcgcattt cccaggttgc
     2401 gctcccccat tcacccttga tttcacgccg ggcgtaggcg gtcatactgc ggatcataga
     2461 cgttcctgtt tataaaagga gaggtggaag gattatagcc atcgatgcct tgtcaggata
     2521 ggaataaccg ccggaagtcc gtataatgcg cagccacatt tgtttcaagc cggagatttc
     2581 aatatgcgtc cagcaggccg tagcaataat caggtgcgtc ccgttaccct gactcgtaac
     2641 tatacaaaac atgcagaagg ctcggtgctg gtcgaatttg gcgataccaa agtgttgtgt
     2701 accgcctcta ttgaagaagg cgtgccgcgc ttcctgaaag gtcagggcca gggctggatc
     2761 accgcagagt acggcatgct gccacgttct acccacaccc gtaacgctcg tgaagcggcg
     2821 aaaggtaagc agggtggacg cacaatggaa atccagcgtc tgatcgcccg tgctcttcgc
     2881 gcggcagtag atttgaaagc gctgggtgag ttcaccatta cgctggactg cgacgtgctt
     2941 caggctgatg gtggcacgcg taccgcgtcg attacgggtg cctgcgtggc gctggcagat
     3001 gcgctacaga agctggtgga aaacggcaag ctgaaaacca acccgatgaa agggatggta
     3061 gccgcagttt ctgtcggaat tgtgaacggc gaagcggttt gcgatctgga atacgttgaa
     3121 gactctgccg cagagaccga catgaacgta gtgatgaccg aagacgggcg catcattgaa
     3181 gtgcagggga cggcagaagg cgagccgttc acccatgaag agctactcac cttgttggct
     3241 ctggcccgag ggggaatcga atccattgta gcgacgcaga aggcggcgct ggcaaactga
     3301 tttttaaggc gactgatgag tcgccttttt tttgtctgta gaaaagtaag atgaggagcg
     3361 aaggcatgaa accatatcag cgccagttta ttgaatttgc gcttggcaag caggtgttaa
     3421 agtttggcga gtttacgttg aagtccgggc gcaaaagccc ctatttcttc aacgccgggc
     3481 tgtttaatac cgggcgcgat ctggcactgt taggccgttt ttacgctgaa gcgttggtgg
     3541 attccggcct tgagttcgat ctgctgtttg gccctgctta caaagggatc ccgattgcca
     3601 ccactaccgc cgtggcgctg gcggagcatc atgaccttga cctgccgtac tgctttaacc
     3661 gcaaagaggc aaaagaccac ggtgaaggcg gcaatctggt tggtagcgcg ttacaaggac
     3721 gcgtaatgct ggtagatgat gtgatcaccg ccggaacggc gattcgcgaa tcgatggaga
     3781 ttattcaggc taatggcgcg acgcttgctg gcgtgttgat ttcgcttgat cgtcaggaac
     3841 gggggcgcgg cgagatttcg gcgattcagg aagttgagcg tgattacaac tgcaaagtga
     3901 tctctatcat caccctgaaa gacctgattg cttacctgga agagaagccg gaaatggcgg
     3961 aacatctggc ggcggttaag gcctatcgcg aagagtttgg cgtttaaaga aactcgccgg
     4021 atgaaaagtc atccggcgtc atattactgc aactgtgccg caattagcgg ccagcgggcg
     4081 tcaaaatcat ccgtcgggcg gtatttaaat tcgctgcgga caaaacgtga cagcatacct
     4141 tcacagaagg ccaggatctg gcttgccagc agggtttcat cggtggtgta accttcaccc
     4201 tcacgcattc tcttttcacg caatacctga cgcagctgcg cttcaatacg ctcgaacagc
     4261 tggttgatgc gcccttgcag gcgatcctgt tcaaacatta gcgcatgacc agtgaggatg
     4321 cgggtcaggc caggattacg ctcaccaaaa ccgagaagca gcaacacaat cagacgcagg
     4381 cgcgctgtgg tgtctttctc atctttcaga atcaggttga tgcgagtaat caggctatct
     4441 tcgataaact caatcaggct atcgaacatg cgggtcttac tggggaagtg gcgatacagt
     4501 gccgcttcgg aaacgccgac agaggcggcc agttttgccg tcgtgatacg ttggcttcca
     4561 tcgctggatt ccagcatcag cgccagagac tgaagtattt cctcgcgacg gttccttttc
     4621 gcagtttgtt tttctgccat gttacaaaat acccctgaaa ataagcactt gccaggcggc
     4681 acccacgcta tgaccgcaaa cgaaatgttt gcggctatgt tatgacgtta ttcggatgcg
     4741 tatgtgttac tgacgaccag agtgaccaaa gccgccttca ccgcggtcgg tggcgtcgaa
     4801 atcttccacc agattaaatt cagcctgtac taccggaaca aaaatcatct gggcgatgcg
     4861 ttcgccaggt tgaatggtga agctgtcctg accacggttc cacacggaaa tcatcaactg
     4921 gccctgatag tcggaatcga tcaatcctac caggttacca agcacgatac cgtgcttatg
     4981 tcccaatccg gagcgcggca gcatcattgc cgccagtgaa ggatcggcaa tatgaatcgc
     5041 cagcccggtc ggaaccagcg tagtgtcacc cggagccagt tctacggcgt cgtcgagaca
     5101 ggcacgcagg tcaagtccgg cagagccaga ggtggcataa gtcgggagcg gaaattcctt
     5161 cccaacgcgc gggtccagaa tcttaacgtc gatttttttc atcataacgg gtcacgatct
     5221 cgtcgagtaa tagttggcca aggagctctt tgcgctcaag cggtaagact ttatctccgt
     5281 cctgccagaa aaggtgtaat gcgttgtttt cgctgttaaa tccttgagtt ggctgggaaa
     5341 catcgttcgc gcagatcaga tcaaggtttt tacggatacg tttttgccgg gcgtattctt
     5401 ccacattatt tgtttcggcg gcaaatccaa cgacgtaggg tcgatggtct tttagtgcgg
     5461 caacgcctgc gacgatatcg gggtttttaa ccatttttat tgttaattca tcaccctgcg
     5521 tggcctgctt tttgattttt tctggggcca cggtagctgc gcgataatcc gccacggcgg
     5581 cgcagccgat aaaaatattt tgctgctgta cagaagcatt cacggcggct tccatttcca
     5641 gcgcggtcat cacatcaaca cgtttaacaa acggtggcgt cggtagtgaa accggacctg
     5701 ataccagcgt gacgttcgcg ccacgacggg cagcggcggc ggcgatagca aaacccatct
     5761 tgccggagct gtgattagag atataacgca cgggatcgag cggttcacgc gtcggaccgg
     5821 cggtaatcat aatgttcaga tgtttcaggt cgttgacggg cgaaaaatgc gccaccgcca
     5881 tatccacaat ggttaacgga tcgagcattc gcccaggacc gatatcacca caagcctgac
     5941 tgccactgtc tggcccccag atgagcaaac cacgggaagc aagcccctct aaattatgct
     6001 gcgtggcagc ggcacggtac atctgctggt tcatggcggg gagcacggct acaggcgcag
     6061 gtgtagccag acaaatcgtc gataccaggt cattcgccat tccggcagca acacgggcaa
     6121 tcaaatctgc cgtggcaggg gcgagaatca ctaaatcagc ccatttaccc agctcaatat
     6181 ggcccatagc ggcttcggct gccgggtcca gcaaactgtc ggaaacggga taaccagaaa
     6241 ccgcctgcaa gctaagtggg gtgataaagg cttttgccgc ttcggtcatg gctacgcgga
     6301 cgtcggcccc gcgatcgcgc aaacgacgca ccagttcagg ggttttatag gcagcaatac
     6361 cgccgctaac gccgagaacg atttttttac cggccaggct catgatgatt tttcctgttg
     6421 ggtgacacca gaagttggcg attttatcac aatacttttg ttgtcgtgcc ttcacctgag
     6481 aatcactttg cgaggcgctt tccaggattg aaaactggcc gtcgatttaa cggaacggct
     6541 atgacaggat gcgagcacca caaaggaggt gaaggtgaaa aacaattcac agctgttgat
     6601 gccgcgcgaa aaaatgctga agtttggtat tagcgcctta acggatgtcg agctgctggc
     6661 gctatttctg cgtaccggaa cgcgcggtaa agatgtatta accctggcaa aagagatgct
     6721 ggagaatttc ggctctcttt atggcttgtt aacctctgaa tatgaacaat ttagtggcgt
     6781 tcatggaatt ggcgtggcga aatttgccca gttaaagggg attgctgaac tggcgcggcg
     6841 ttactacaac gtgcggatgc gtgaagaaag ccctttactc agcccggaga tgacgcggga
     6901 atttttacaa agccagctta cgggtgagga gcgggagatc tttatggtga tctttctcga
     6961 ctcacaacac cgggttataa cgcatagccg tcttttttcc ggcacgctaa accatgttga
     7021 agtccatcct cgggaaatta tccgcgaagc gataaaaata aacgcctcgg cgctgatcct
     7081 tgcacataat cacccttcgg gttgtgctga acccagtaaa gcggataaac tcattactga
     7141 acggataata aagagttgtc agttcatgga tttacgcgtg ctcgaccata tcgtgattgg
     7201 gcgtggagag tatgtttctt ttgccgaacg cggctggatt taacccgcta tgcgcgatcc
     7261 ttcgggatct ttgtctgttc gggacttgag cacatcgctg agtcagcgta tactacgcca
     7321 cctttgagaa tctcgggttt ggcatttggg cctggcaatc gagagttcac atagaactgc
     7381 gatgactggg ctgtaaagcc tgacgaggcg ccaatacccc atacgaagct cgagctaatt
     7441 tgatttttgg agaatagaca tgtcccgagt ctgccaagtt actggcaagc gtccggtgac
     7501 cggtaacaac cgttcccacg cactgaacgc gactaaacgc cgtttcctgc cgaacctgca
     7561 ctctcaccgt ttctgggttg agagcgagaa gcgttttgtc accctgcgcg tatctgctaa
     7621 aggtatgcgt gtaatcgata aaaaaggcat cgatacagtt ctggctgaac tgcgtgcccg
     7681 tagcgaaaag tactaagtac ttagaggaaa taaatcatgg ctaaaggtat tcgtgagaaa
     7741 atcaagctgg tttcttctgc tggtactggt cacttctata ccactacgaa gaacaaacgt
     7801 actaagccgg aaaaactgga actgaaaaaa ttcgatccag ttgttcgcca gcacgtgatc
     7861 tacaaagaag cgaaaatcaa ataattctcg ctttgatgta acaaaaaacc tcgctccggc
     7921 ggggtttttt gttatctgct tgcccccata ttgactgcat ctgttcattc ctggagatgc
     7981 tatgcctgaa ttacccgaag ttgaaaccag ccgccgcggc atagaaccgc atctcgttgg
     8041 tgcaaccatt cttcatgcag tggtgcgcaa cggacgcttg cgctggccgg tttcagaaga
     8101 gatctaccgt ttaagcgacc aaccagtgct tagcgtgcag cggcgggcta aatatctgct
     8161 gctggagctg cctgagggct ggattatcat tcatttaggg atgtctggca gcctgcgcat
     8221 ccttccagaa gaacttcccc ctgaaaagca tgaccatgtg gatttggtga tgagcaacgg
     8281 caaagtgctg cgctacaccg atccgcgccg ctttggtgcc tggctgtgga ccaaagagct
     8341 ggaagggcat aatgtgctgg cccatcttgg accggagccg cttagcgacg atttcaatgg
     8401 tgagtatctg catcagaagt gcgcgaagaa aaaaacggcg attaaaccgt ggctgatgga
     8461 taacaagctg gtggtagggg tagggaatat ctatgccagc gaatcactgt ttgcggcggg
     8521 gatccatccg gatcggctgg cgtcatcact gtcgctggca gagtgtgaat tgttagctcg
     8581 ggtgattaaa gcggtgttgc tgcgttcgat tgagcagggt ggtacaacgc tgaaagattt
     8641 tctgcaaagt gatggtaaac cgggctattt cgctcaggaa ttgcaggttt acgggcgaaa
     8701 aggtgagccg tgtcgggtgt gcggtacgcc gattgtggcg actaaacatg cgcagcgggc
     8761 aacgttttat tgtcggcagt gccagaagta attcatgcgc gccggatcgc ataccatccg
     8821 gcataaacgc tacgctaact tcgccatcag cgcctgatgg acattctccg gcaggaaatg
     8881 ggtgacatcg ccctgatggc gcgccacctc tttcaccaac gatgaagaga taaacgacca
     8941 ctctttcgac ggcatcagaa acacactttc cagttccggc attaagtggc gattcatatg
     9001 cgccagctgc atttcatatt caaaatccgc caccgcacgt aggccacgaa tcagcaccgt
     9061 agcgtgttga ttacgggcga agttcgccat caaatcacta aacccaacta cttccacgtt
     9121 ccccagatgc gcggttgcct gctgtgccag cgccacacgc tcttccaggg taaacatcgg
     9181 ttttttactg gggctggcgg caatcgccag aataacgtga tcgaacattt gcgtggcgcg
     9241 cgtcacgata tcgatatgac cattggtaat gggatcgaaa gtacccggat aaatcgcccg
     9301 tttttgcata acaacctcaa tgcgttttcg gtggcaggta aggttccagc agttgaagca
     9361 ggcgctgtag cgcgccctgg ttttgataca gtacttcaac ggcatgacgg ccatagaaac
     9421 tacggtaatc ggcgtcggtg agtaaagagg aaacctcttt tgcaagcgta gtggcatcgg
     9481 taacggtaat cagcccgctt gcctgctcca gccgcgcgca aatgtcttta aaattaaaag
     9541 tatgcggccc catcaatacc ggaatagcgt gtgcggcagc ttccagcgga ttatgcccac
     9601 cacgttcaac cagtgaaccg ccaacaaagg cgagatcggc aatgccgtac agtaacatca
     9661 actcgcccat cgtatcgcca accacaacct gcgtgctggt ggaggggact tcccctgaag
     9721 agcgtgtgat atagcttagt ccagcctggc ggacaaggtt aatcgcatcc gggaagcgtt
     9781 ctggatgacg gggtaccagg atgagcaata aattcgggaa ttgctgtaac aatacctgat
     9841 gtgcggcgat caccacactc tcttcacctt cgtgagtgct ggtggcaatc cataccgggc
     9901 ggtgtggtgc ccactggcgg cgcagcgtca cggctttagc agccaactgc ggcgttacag
     9961 aaatatcgaa tttcaggcta ccggtaacgg ttacctggtt attttttgcg cccagcgcca
    10021 caaaacgtgc accatcttct tcattttggg cggcaatcag cgtaatacga cgcagcaagc
    10081 gacggacgaa tttacccagt ttggcataac ctgcggccga gcgggcagag agtcgcgcgt
    10141 tcgcgatcac cagcggaatt ttacgtttat gtagcgccgc aatcaggtta ggccatagtt
    10201 cggtttccat aatcaacacc agtttagggt cgactttatt caggaaacga ttaagtgcat
    10261 cgggcaggtc atacggcaga taaacgtgct gaacatcctt cccgaaagcc gattgtacgc
    10321 gctccgaacc ggttggcgtc atggttgtaa cggtaatcgg taaatcagga taacgatgac
    10381 gcagcgcgcg caccaacggg atcgccgcca gagtttcacc gacggagacg gagtgcagca
    10441 taatgccgcc tggttttagc ggatggcggt aaaaaccgta acgttcaccc cagcgttttc
    10501 gataggccgg agccttacgt ccgcgcaccc agagccgtat ccagatcagc ggctgaataa
    10561 ggtagagaag ggcggtgtaa agcaattcga gcatagtaaa tagctgactt atggatgtgc
    10621 tggggattct atgtatttag ctgtggcttt accattactt ttcccgtttt tgacttaaat
    10681 agcaatttac ccgccaattc ttgctgaaca tctatacttt ttttgtattt ttatgcgatt
    10741 cattgatttc tgctgtacgt gcaggaagga atcgcagagc aacagtgaaa gaatatggtt
    10801 gctaatgatt ttatttgatt gatttcttta ttgaaaatca acaatatgct taaaaatcat
    10861 tcgggtcgga ttgccgcgaa agaagtgata cactagcgcg tcaatatcag tgcggtatca
    10921 gtattcaggt agctgttgag cctggggcgg tagcgtgctt tttctgcttc accttaatcg
    10981 gataatctca acaaaaagag ttacttgtgg ataagctatt tcgaagaatt ttgctcatta
    11041 agatgcgttt tcatggggat atgttattaa ctactcccgt cattagttcg ctgaaaaaaa
    11101 attaccctga cgcaaaaatc gatgtgctgc tttatcagga caccatcccg atcctgtctg
    11161 aaaatccaga gattaacgcg ctctacggca taaaaaataa aaaagcaaaa gcctcagaaa
    11221 aaattgccaa cttttttcat ctcatcaagg tattacgtgc caataagtat gaccttatcg
    11281 tcaatctcac cgatcaatgg atggttgcta tactggttcg cttattaaat gcccgtgtga
    11341 aaatttccca ggattatcat catcggcagt ctgctttttg gcgtaaaagt ttcacccatt
    11401 tggtgccgtt gcagggtgga aatgtggtgg aaagtaactt atccgtgctg accccattgc
    11461 gagttgattc gttggtgaag cagacaacca tgagttaccc gcctgcaagc tggaaacgta
    11521 tgcgtcgcga acttgatcat gctggtgttg gacaaaatta tgtggttatc caacctacgg
    11581 cgcggcaaat cttcaaatgc tgggacaacg ccaagttttc cgctgtgatt gatgccttac
    11641 atgctcgtgg ttatgaagtt gttctgacgt ccggcccaga taaagacgat ctggcctgcg
    11701 tcaatgaaat tgcgcaggga tgccagacgc caccagtaac ggcgctggct ggaaaggtga
    11761 ccttcccgga acttggtgcg ttaatcgatc atgcgcagct gtttattggc gttgattccg
    11821 caccggcgca tattgccgct gcagttaata cgccgctgat atcgctgttt ggtgcgacag
    11881 accatatttt ctggcgtccc tggtcaaata acatgattca attctgggcg ggagattacc
    11941 gggaaatgcc aacgcgcgat cagcgtgacc gaaatgagat gtatctttcg gttattccgg
    12001 cggcagatgt cattgctgct gtcgataaat tactgccctc ctccacgaca ggtacgtcgt
    12061 tatgatcgtt gctttttgtt tatataaata ttttcccttt ggcggtttgc agcgcgattt
    12121 tatgcgtatt gctcagacag tcgccgcccg aggtcatcat gttcgggttt atacccagtc
    12181 gtgggaaggc gaataccctg atgtatttga actgatcaaa gtgccggtta aatcgcatac
    12241 caatcacggg cgcaatgcgg agtattttgc ctgggtgcaa aaacatttac gcgaacatcc
    12301 cgtcgataaa gtcgttggat tcaacaaaat gccggggctg gacgtttatt atgccgctga
    12361 tgtttgttat gccgagaaag tcgcgcagga aaaaggcttt ttctatcacc tgacgtcacg
    12421 ttatcgccat tatgccgcct ttgagcgggc aaccttcgaa cagggcaagc cgacacagct
    12481 gctgatgctg acagataagc aaatcgccga tttccagaaa cattatcaga ctgaagcgga
    12541 gcgttttcat attctgccac cggggattta tcctgatcgt aaatatagcc agcagccagc
    12601 taatagccgt gaaatcttcc gtaagaagaa tggaataacc gaacaacaat atttattgtt
    12661 gcaggtcggt tcagacttca cgcgtaaagg tgtcgatcgt tccattgaag cacttgcttc
    12721 gttaccggat tcgctgcgcc acaacacatt gctatatgtt gttggacagg ataaaccgcg
    12781 aaaatttgag gcgctggcag aaaaacgcgg cgtgcgcagt aatgttcact tcttctcggg
    12841 gcgcaacgat gtctcggaat taatggcggc ggcggattta ttactgcatc ctgcctacca
    12901 ggaagcagcg ggaattgtgc tactggaagc gattactgca ggattaccgg tactaacaac
    12961 agccgtttgt ggctatgcgc attatattgt cgacgccaat tgcggcgagg ctattgctga
    13021 gccattccgc caggaaacat tgaatgagat tttacgcaaa gcgttaacgc aatcttcatt
    13081 gcgccaggcc tgggcggaaa atgcgcgaca ttatgctgat acacaagatt tatacagtct
    13141 gccagagaaa gcggcggata tcataacggg tggtctggat ggttgaactt aaagagccgt
    13201 ttgccacgtt atggcgcggt aaagatcctt ttgaggaagt taaaaccttg cagggtgagg
    13261 tttttcgtga actggaaact cgccgcactc tgcgatttga aatggcgggc aaaagctatt
    13321 ttctcaaatg gcatcgcggc acgaccctga aagagataat caaaaattta ctctcattgc
    13381 ggatgccagt attaggcgca gaccgcgaat ggagtgcgat tcatcgactg cgggatgtcg
    13441 gcgttgatac tatgtatggg gtggcatttg gcgaaaaagg tattaatccg ctgagcagaa
    13501 cctcgtttat tattaccgaa gatctgaccc caaccatcag tctggaagat tactgtgctg
    13561 actgggcgac caacccacca gatgttcgcg taaagcgtat gcttattaag cgtgtcgcga
    13621 cgatggtgcg cgatatgcat gctgcgggca ttaaccaccg tgactgttat atctgtcatt
    13681 tcctgctgca cttgcctttt tccggtaagg aagaggagtt aaaaatttcg gtaattgacc
    13741 tacaccgggc gcagcttcgc acgcgcgttc cacgtcgttg gcgcgataaa gatcttatag
    13801 ggctttattt ttcttcaatg aatattggcc tgactcagcg ggatatctgg cggtttatga
    13861 aagtgtattt tgccgccccg cttaaagaca ttctcaagca ggaacaagga ctgctgtcgc
    13921 aagcagaagc aaaagccaca aaaatcaggg aaagaacgat tcgaaaatcg ttgtaatttc
    13981 cggagagaaa tatgagtgcc cactatttta atccacaaga gatgatcaat aagacaatca
    14041 tcttcgatga aaggccagcg gcgtcagtgg catcatcatt ccatgttgct tatggcattg
    14101 ataaaaactt tctttttggt tgtggtgttt caatcacgtc agttttgtta cataacaacg
    14161 acgtgagttt tgttttccac gtttttattg atgatatccc tgaagccgat atccagcgtt
    14221 tagcccaatt ggcgaaaagc tatcgtacct gtatccagat ccatctagta aattgtgaac
    14281 ggcttaaggc attaccgacg accaaaaatt ggtctattgc catgtatttc cgttttgtaa
    14341 ttgcagatta ctttattgat caacaagata agatccttta cctggatgct gatatcgcct
    14401 gtcagggaaa cttaaagccg ctgataacaa tggatcttgc caataacgtt gctgctgttg
    14461 ttactgaacg cgatgctaac tggtggtcgt tacggggtca aagtctgcag tgtaatgaac
    14521 ttgaaaaggg ctactttaat tcaggtgtcc tgttaattaa tacactagcg tgggcgcagg
    14581 agtccgtttc tgctaaagcg atgtcgatgc ttgctgataa agccatcgtt tcccgtttca
    14641 cctatatgga tcaagatatc cttaatctta tcctgttagg gaaagttaaa ttcattgatg
    14701 ctaaatacaa tacgcaattt agtttaaatt atgaattaaa aaaatcattt gtttgtccaa
    14761 ttaatgatga aaccgtatta attcattatg tcggcccgac aaaaccctgg cattactggg
    14821 ccggttatcc aagtgcgcaa ccttttatca aagccaaaga agcatcgccc tggaaaaatg
    14881 aaccgttaat gcggccagtt aactcaaact atgctcgtta ttgcgccaag cataatttta
    14941 aacaaaataa accaattaac gggataatga attatattta ttatttttat ttaaagataa
    15001 taaaatgaaa ttgagaaaag ttaaatgaat gaatttataa aagaacggtt ttcgtattta
    15061 gcagataata aaaaagaaaa cgccccagag ctaaatgttt cctacggtat cgataagaat
    15121 tttttgtatg gtgctggcgt ttcaatttct tccgttttga ttaataattc agatattaat
    15181 tttgtctttc atgttttcac tgattatgtg gatgatgatt atttaaagtc atttaatgaa
    15241 acagcaaaac aatttaatac ctcaattatt gtatatttaa ttgaccccaa atactttgct
    15301 gatctgccga cgtcacagtt ttggtcatac gcgacatact tcagggtatt gtcttttgaa
    15361 tatctgagtg aaagtatttc cacactgctg tatctggatg ccgatgttgt ttgtaaagga
    15421 agcctgaaac ctctcacaga aattatattt aaagatgagt ttgctgcggt cattcctgac
    15481 aatgatagta ctcaggcggc atgtgcaaaa cgcctcaaca ttcccgaaat gaatggacgt
    15541 tatttcaatg caggcgttat ctatgtcaat cttaaaaaat ggcatgaagc aaatttgaca
    15601 ccgtatttac tcaaactttt acgaggggaa actaaatatg gctctcttaa atatttagat
    15661 caggatgcgt tgaatatcgc atttaatatg aataatatct accttgcgaa ggattttgat
    15721 actatttata ccctgaaaaa cgaactttat gatcgtagtc atcgaaagta tcagcaaacc
    15781 attaccgata aaacagtgtt gattcactat acagggataa ctaaaccatg gcatagctgg
    15841 gctggatatc cgtctgcatc atactttaat atcgcgcgtg aacaatctcc ctggaagaaa
    15901 tatcctctta aagaggcgcg gactgttgca gaaatgcaga aacaatataa gcatctgttt
    15961 gcccatggtg agtatataaa aggcataact tcattaatta agtacaagct taagaaataa
    16021 attactctta tgattacaag tatacgttat cgcggcttct cattttatta caaagataat
    16081 gataataaat ataaagaaat ctttgatgaa atactggcct ataattttaa aacagtaaaa
    16141 gtattatgta atattgatga taccaaagta tcgttgattg atacgaaata tggtcgctat
    16201 gtttttaaag tctttgctcc gaaaacgaaa aggaatgaac gttttttaaa atcttttgta
    16261 aaaggtgact actatcagaa tttgatcgtt gaaaccgatc gtgtcagaag tgcaggtctt
    16321 acttttccta atgattttta ttttctggct gagcgtaaaa ttttcaacta tgccagtgtt
    16381 tttatcatgc ttatcgagta tgtcgagggc gtagagctca atgatatgcc gattattcca
    16441 gaaaatgtta aagcagaaat taaggcttcg atggaaaaat tgcatgcctt aaatatgcta
    16501 tcgggcgacc cacaccgggg taactttatc gttagtaaag atggtgtcag gataattgac
    16561 ctatccggta aaagctgtac ggcagagcgt aaagctcgtg atcgtctggc catggaacgt
    16621 cacctgggta ttgccaacga aataaaagat tatggctact attcagtaat ctacagaacc
    16681 aaactacgca aatttattaa aaaattaaaa ggcaaagcgt aaaccacaca gtcaaaacgg
    16741 aaccaacatg gatttattag cagagagtat tactgaagtc gctgtctctg gggaaattgc
    16801 taacaccgat cgtgtgttaa atatcgctta cggtattgac cgtaactttt tatttggtgc
    16861 ggcagtatct atgcaatcag ttgttatgca taacccggac cttgcggtta agtttcatct
    16921 ctttaccgac tacattgatg aagattatct acaacgtgtt aatgctttta ccagcaaaaa
    16981 tgctaacgtt gaagtaataa tttataaagt ctccaatgcc tttattgata tcttccccag
    17041 cctgaaacag tggtcttatg caacattctt ccgtttagtt gcgttccagt atttgagtga
    17101 aactattgaa aatctgttat atatcgatgc tgatgtcatc tgtaaaggct cattagctgg
    17161 attgcttgat attaattttg atgaggataa gttcgcagct gttattaaag atgtgccttt
    17221 tatgcaggaa aaaccagcga agcgtctggc tatagaggga cttccaggga attatttcaa
    17281 cgccggtgta gtatatctgc agcttgaagc atgggcgaaa aatgatttta tgaataaagc
    17341 cattgctatg ctggcaagtg acccgcagca cacgaagtat aaatgccttg atcaggatat
    17401 tttaaatatt ctgttctttg gtcattgtaa ttttattagc ggcgattatg attgctttta
    17461 tggcattgac tatgagttaa aaaataaaag cgatgaagat tataaaaaga ccattaccga
    17521 tgatactaag ctgattcatt atgttggcgt aacgaagccc tggaacgact ggacgaatta
    17581 tccctgccag aagtatttta atgaggctta tcaggcttct tgctggaatg atgtggcgtt
    17641 tattccagcc acgaatgaaa agcagtatca agtgaaatat caacatgcaa agaaaaatgg
    17701 tgatacgttt aacgctttta tttacttcat taaatttaaa ttaaataagt ataaaagaaa
    17761 actatttgga taataataaa aatcatggat gtctgagtta caataataat taaggatgag
    17821 tactatcata ttttattagt tcaggcaaga gaacacgatg agcaatgatt accctttagt
    17881 atctataata ataccgacgt ataattcatc tgattacatt actgaaactc taacgaaatt
    17941 agaaaaacaa acttacccaa attttgaaat tgttattgtt aatgatggtt ctaaagataa
    18001 cacatcaaac gttttgagag agtatgggtt aacccactct cgattaatta ttgtcaataa
    18061 agaaaatggc ggtgtttcgt ctgccaggaa tacaggtatc cgcaaggcgc aaggacagtt
    18121 tatatgtttt atggatgatg atgatgagat agatcctaac tatctgctga agatgtatac
    18181 cagacaacat gagacgggag gggatgcgat ttattgtggg ctttatggcc attatataaa
    18241 agatggtgtt acttactcac ctataaatac agagtttaat gaaggatctt tacttttcga
    18301 ctttttttat aaaaaggtta gattccatat agggtgcttg tttataagaa aacaacttct
    18361 ggaagagaat aatctttttt ttgatgaaga tttacgacta ggagaagatc ttgattttat
    18421 ctatcgactg ctaattacat gcgatatgta tgcggttcca tattatatgt ataagcataa
    18481 ctatagagaa aattccttaa tgaactcatg tagaaccatc actcattatc gacatgagtc
    18541 atttgcgcac gaaagaatct actcttctgt gatgcagtta tacaaaggta accggaaaga
    18601 agaaattcat acattattga gtcaaaatag agcttatcat aaaactcgtt atttatggaa
    18661 tgttctactt aatggtgatt ttaaactatt gaatcaatta gttgaaagca atgaaaaaga
    18721 attaagagat tgtaatcttc ctggcaagag agataagaga cgagcaaaaa tattagcatc
    18781 aaaaaattat attctctgga ggatggtaag actggtaaat agaaaaaaga ataaacgtta
    18841 gatcttgcat taaataaccc atcctcgtag cataggttga aattatatgt cgttttgttg
    18901 gaatgaaatt aattctggta taaagtcttt aattcttata ttatgtattt tttctttaat
    18961 gactttgtct ttatgggatg atgttgcaac aaagtttctt catgcagctg gaattatatc
    19021 tgcattgtat tttcttgcga caccaaaaaa aacaataact aataatccta ctttgttaat
    19081 tttcatctca ttatgtcttt tgggtatcgt aaatatcatc tggtattcac attataaagt
    19141 ttcaggctct gtttatacca atgcatatcg tggcccaatg gaaactggaa aaattgcctt
    19201 gtgtagcgcc tttattttct tagttctttt tgctaaaaat gagatgagaa caaaaataaa
    19261 atttgggaaa ctaattctgt tcgcatccct ggcaacgcag ttactttttt ttgcgcatgc
    19321 catgtggcaa catttctatt taaacgtcga ccgtgttgca ttatcagctt cccacgctac
    19381 aacagcaggc tacatcatcc tttttccttc tttactggca tcaattctca ttttaaaatc
    19441 cgactttaga cataaaacaa cattatatac aattaacttc atgcttagct tatgtgctgt
    19501 catagtaact gagacgcgtg cagccatatt agtgtttcca ttctttgcgt taatattaat
    19561 cgtaatggat agttatatta ataagcgaat taattataag ttatattgtt ttattgcgat
    19621 tgcattatta gcaggtgtat tttcttttaa agatacattg cttatgagaa tgaatgactt
    19681 aaataacgat ttagttaatt attcgcatga taacaccaga acttcagtcg gtgcccgtct
    19741 ggcaatgtat gaagttggct taaaaacata ttctccaata ggacaatcac tggaaaaacg
    19801 tgcagaaaaa atacatgagc tagaagaaaa agagcctaga ttgagtggcg ctttaccttt
    19861 tgtagattct catttgcata acgatctcat agatacgtta tcaacgcgtg gtattcctgg
    19921 agttgtatta acaattttag cattttcagc aatactcata tatgccttaa gaactgctaa
    19981 agaaccttat attttaatct tgcttttttc actactggta gtaggcctaa gtgatgtaat
    20041 actcttttct aaaccggttc cgactgctgt gtttgtcacc ataatattgc tttgtgctta
    20101 ttttaaagca caatcagacc aatatttatt agataagtaa tgaatatatg aaataaaatc
    20161 agcaaggagg ctgattttat ttcaaaatta tctattaagg ggttgtaatt taaatcatag
    20221 cagcgttttc ttcaatgaat cgcttaacag catttgctgt caattgagac aactcattcc
    20281 ccggagccct acaaaccatt tgattcttcc catacccacc aattaatccc ggatcggttg
    20341 gtccataaac cgtgatattg ggtctatcca gtgccgccgt taaatggctt aaccccgtat
    20401 ccaccgacac tacaaattta gccccggcca gcacgcgggc aacgccttcc agactcatct
    20461 tcggcaatac ttcaacataa tcaaatcctt ccgccagtcg tttcgcccgt tcttcctcat
    20521 gcggcgcgcc ccacggaagt ttaatccgta ttcctgaatc agccagtaaa ccaatcaatt
    20581 ctcgccagtg ttcttccggc cagtgtttat catcacgggt cgtcgcatga agaaatacgg
    20641 catattcgcc agcatctgta ggcaggttcg tcagaaaatg ctgtgcgata gcataatcgc
    20701 cctgggtttg cggtttgcta tagcccaaac ttttggcaaa cagttcgcgg gtgcgttcta
    20761 cggcgtgctg ctgttttgca atatgatgct tacaattgta aaacaggctg gctaaaggtt
    20821 cgcgagcggt ttgccagtcc aatccatgct ttacgccatg cgccagacgt gtcaccagtg
    20881 ccgcgctttt taccagcccc tgagcgtcga taactgcgtc atagttctct gcttgtagcg
    20941 cttcacgaaa cgctttgcgt tcagctttta tgggggccga gaaccaggct ttacgccagc
    21001 gacgtattgc cacaggaata actcgctcaa cggcagcgtg ccaggaagga atctgtgcga
    21061 acccttcttc caccacccag tcaaacttaa tccctgggat tgcctgctgg gcatcagtga
    21121 gtgcgggcaa cgtatggaga acatcgccca tcgacgatgt tttaacgatc aaaacccgca
    21181 tccgtcaggc ttcctcttgt aacaatagcg tgttgagttc ttccagtacg cgctggggag
    21241 taatgtcgat caagctctgg tgataaccct ccgcagcgtc acctttacgc actttgtgat
    21301 agccggtaat cagacggatc acgcgcgctt tatgggatag cggcggtgtg aagtccgggc
    21361 tacttggacc atacagggca accagcggac gattgagcgc cgccgcaacg tgcatcaggc
    21421 cagaatcgtt agtgacaatg gctttacagg ctgcaatcag gataaccgct tgatcaagct
    21481 gtgtttcccc cgccaggttc cgacaccatg cctgctgctc ggtattcaaa gcggcaagaa
    21541 tctcattgcc cgcttcatga tctttcgcag agccaaacag aaccacctga taaccttcat
    21601 caatcagctg ctttgccagt tccgcatagt ggtagtgtgg ccagcgtttt gccggaccaa
    21661 actccgcacc cgggcaaaag ccaatcatcg gacgttctga tgaaagcgaa aattgattac
    21721 aggtatatga tttttcacct tcgctcacct gcaactgcgg ccataacaat ggctgcggca
    21781 gatcttgtgc ggtacgcata atgcctttgt cataggccag cgcgacatag cgttccacca
    21841 ttagcggcca ggcttcttta tcgagcacgc gtacatcgtt gagtaaaccg tagcgcatct
    21901 cgccgcgcca gccggtgcga tgaggaatac ccgcgaagaa aggcactaat gcagatttga
    21961 aggagttggg taagacgtag gcgcggtcgt agcgcttttc acgcaggcta tgacccagtt
    22021 tgcggcgttc gccgatttcc agcgctccgt gaccgagagg catagggata gcttcgttaa
    22081 cttccggcat ccgcgataat aatggacggc accatgccgg tgccatcaca tcgattatcg
    22141 cctggggata gcgcgcctgg agcgtgcgat agagactttg cgacatcatc atgtcgccaa
    22201 cccaagacgg gccgatcacc agtattttca tgcagagctc ttatgcgtcg cgattcagcc
    22261 aggccatgta ttccgttaca ccttcagcaa cggttttgaa cggtttgtcg taacccgccg
    22321 cgcgcagatt tgtcagatct gcctgagtga acgcctggta gcggcctttc agcttatccg
    22381 ggaacggaat gtattcgatc tggcctttct tgtgataagc cagagtagca tctgctacgg
    22441 cctggaagga ttccgcacga ccagtaccga ggttgaagat accggaaacg ccattttcca
    22501 ggaaccacag gtttacatct gccacgtcgc ccacatagac gaagtcacgt ttgaagttct
    22561 cgctaccttc aaacagcttc ggtgattcac cgttgttaag ctgagtgttg agatggaaag
    22621 cgacgctcgc catgctgcct ttatggcctt cacgcggtcc ataaacgttg aaatagcgga
    22681 agccaacaat ctgcgagttc gcttcaggca ggatttggcg aacatattca tcaaacagga
    22741 attttgagta accgtagacg ttcaacggtt tttcgtactc gcgggattca ataaagtcgg
    22801 aggtgcgtcc gccgtaggtg gctgcggaag aagcgtacag gaacgggatt tcgcgctcca
    22861 ggcagtagtg cagcagctcc ttggagtatt gatagttgtt atccatcata tacttgccgt
    22921 cccactcggt ggtggaagag catgcgcctt cgtggaaaat cgcttcgaca tcgccgaact
    22981 cttcgccagc cataatctgg atcaggaagt cttccttatc catatagtcc gcgatatcca
    23041 gatccaccag gttcacaaac ttggtgccgt ctttcaggtt gtccaccacc agaatatcgg
    23101 tgatgccttt atcattcagg gccttaacga tgttgctgcc gataaagccc gcgccgccgg
    23161 taacgatgat cataactgta accttcgaat tatggagtca gagacaatct cagacacgaa
    23221 tacttctatc atatcactat acggcgttgg cttcagccat tcgccaaaag tgagattgat
    23281 ggacgttatt tatcctgaat tttgcagaag tgttaacgcg tcatctcgtc gcgacgtata
    23341 agtttgggta atatgtgctg gaatttgccc tgtctggaga atcgcaatgc gtggagaatt
    23401 ttatcagcag ttaaccaacg atctggaaac cgcacgggcg gaagggttgt ttaaagaaga
    23461 gcgcattatt acgtctgcgc agcaagcaga tatcactgtg gctgatggaa gccacgtcat
    23521 taacttttgt gccaacaact atctcgggct ggcgaatcat ccggatctga ttgcggcagc
    23581 aaaggcggga atggattctc acggtttcgg catggcttcg gtgcgtttta tttgcggcac
    23641 tcaggacagc cataaagagc ttgaacaaaa actggcggca ttcctgggga tggaagatgc
    23701 gattctctac tcttcctgct ttgatgctaa cggtggactg tttgaaacgc tgctgggtgc
    23761 ggaagacgcc attatctccg acgcactgaa ccacgcgtct attattgatg gtgtgcgtct
    23821 gtgcaaagct aaacgctatc gctatgccaa caacgatatg caggagctgg aagcacgtct
    23881 gaaagaagcg cgtgaagccg gtgcgcgtca tgtgctgatt gccaccgatg gtgtgttctc
    23941 aatggacggc gtgattgcca acctgaaagg cgtttgcgat ctggcagata aatacgatgc
    24001 cttggtgatg gtggatgact cccacgcggt cggttttgtc ggtgaaaatg gtcgtggttc
    24061 ccatgaatac tgcgatgtga tgggccgggt cgatattatc accggtacgc ttggtaaagc
    24121 gctgggcggg gcttctggtg gttataccgc ggcgcgcaaa gagatggttg agtggctgcg
    24181 ccagcgttct cgtccgtacc tgttctccaa ctcgctggca ccggccattg ttgccgcgtc
    24241 catcaaagta ctggagatgg tcgaagcggg cagcgaactg cgtgaccgtc tgtgggcgaa
    24301 cgcgcgtcag ttccgtgagc aaatgtcggc ggcgggcttt accctggcgg gagccgatca
    24361 cgccattatt ccggtcatgc ttggtgatgc ggtagtggcg cagaaatttg cccgagagct
    24421 gcaaaaagag ggcatttacg tcaccggttt cttctatccg gtcgttccga aaggtcaggc
    24481 gcgtattcgt acccagatgt ctgcggcgca tacccctgag caaattacgc gtgcagtaga
    24541 agcattcacg cgtattggta aacaactggg cgttatcgcc tgaggatgtg agatgaaagc
    24601 gttatccaaa ctgaaagcgg aagagggcat ctggatgacc gacgtccctg taccggaact
    24661 cgggcataac gatctgctga ttaaaatccg taaaacagcc atctgcggga ctgacgttca
    24721 catctataac tgggatgagt ggtcgcaaaa aaccatcccg gtgccgatgg tcgtaggcca
    24781 tgaatatgtc ggtgaagtgg taggtattgg tcaggaagtg aaaggcttca aaatcggcga
    24841 tcgcgtttct ggcgaaggcc atatcacctg cggtcactgt cgcaactgtc gtggcggtcg
    24901 tacccatctg tgccgcaaca cgatcggcgt cggcgttaac cgtccgggct gcttcgccga
    24961 atatctggtg atcccggcgt tcaacgcctt caaaatccca gacaatatct ccgacgacct
    25021 ggcttccatt tttgatccct tcggtaacgc cgtgcatacc gcgctgtcgt tcgatctggt
    25081 tggcgaggat gtgctggtct ctggtgcagg tccgataggt attatggctg cggcggtggc
    25141 gaaacacgtt ggtgcacgca atgtggtgat cactgatgtt aacgaatacc gccttgagct
    25201 ggcgcgcaaa atgggtatca cccgtgcggt taacgtcgcg aaagaaaacc ttaatgatgt
    25261 gatggctgaa ctgggcatga ccgaaggctt tgatgtcggt ctggaaatgt ccggtgcgcc
    25321 gccagcgttt cgtaccatgc ttgacaccat gaaccacggc ggccgtattg cgatgctggg
    25381 tattccgccg tctgatatgt ctatcgactg gaccaaagtg atctttaaag gcttgttcat
    25441 taaaggtatt tacggtcgtg agatgtttga aacctggtac aagatggcgg cgctgattca
    25501 gtctggcctc gatctctcgc cgatcattac ccatcgtttc tctatcgatg atttccagaa
    25561 gggctttgac gctatgcgtt cgggccagtc cgggaaagta attctgagct gggattaaca
    25621 cgaacaaggg ctggtattcc agccctttta tctggggata atctgttgaa tatgtaaaat
    25681 cctgtcagtg taataaagag ttcgtaattg cgctgatctc ttatatagct gttctcatta
    25741 tctctctacc ctgaagtgac tctctcacct gtaaaaataa tatctcacag gcttaatagt
    25801 ttcttaatac aaagcctgta aaacgtcagg ataacttcag aggtcgtcgg taatttatga
    25861 tgaacagcac caataaactt agtgttatta ttccgttata taatgcgggc gatgatttcc
    25921 gcacttgtat ggaatcttta attacgcaaa cctagactgc tctggaaatc attattatta
    25981 acgatggttc aacggataat tctgttgaaa tagcaaagca ttacgcagaa aactatccgc
    26041 acgttcgttt gttgcatcag gcgaatgctg gcgcatcggt agcgcgtaat cgtgggatcg
    26101 aggtggcgac gggcaaatat gtcgcttttg tcgatgctga cgatgaggtc tatcccacca
    26161 tgtacgaaac gctgatgacc atggcgttag aggacgacct cgacgtggcg cagtgcaacg
    26221 ctgactggtc ttttcgtgaa acgggagaaa cctggcaatc catccccagc gatcgccttc
    26281 gctcaaccgg cgtattaacc ggcccggact ggctgcggat ggggctttct tcgcgccgtt
    26341 ggactcacgt tgtctggatg ggggtttatc gccgtgatgt tattgttaaa aataacatta
    26401 aatttattgc cggattacat catcaggata ttgtctggac gacagaattc atgtttaacg
    26461 cgctgcgtgc gcgatatacc gagcaatcat tatataaata ttatctgcat aatacgtcag
    26521 tgagtcggtt gcatagacaa gggaataaaa accttaatta tcaacgtcac tatattaaga
    26581 ttacccgcct gctggagaaa ttaaatcgaa attatgccga caaaattacg atttatccgg
    26641 aatttcatca gcaaataact tacgaagcat tgcgtgtttg ccatgcggtg cgcaaagagc
    26701 cggatattct tacccgccaa cggatgattg ccgagatatt tacttccggt atgtataagc
    26761 gcctgattac caatgtgcgc agcgtgaagg tcggttacca ggcgttactg tggtctttcc
    26821 gcttatggca atggcgcgac aaaacgcggt cgcaccatcg cattacgcgt agcgccttta
    26881 atttgcgcta gcgttaaact tcgccgcttc gggctgtttg ccccagcctt gccactgatg
    26941 ctggaagtaa acgatcagcg tgctctggct gatgctttcg cttaatactt caaagaagcg
    27001 attagcataa acaggttcta tcggtttctt cggtttgcac agcttcacgc cacggaacgg
    27061 attacgcggt gcatcaggca cagcgttttt cggcggtgta gaagtatcaa cctgcggttc
    27121 attcagcaag ctgctggctt tcaccagcgt aatgtctggc ggcaggttat aaaccatctg
    27181 ttgtagcacg cgtaccgtta aagggtgagg atgcccaatg gcaatggttg aaccgttgcg
    27241 acgcgccaga tcaattgcgc gattaaattg cacacggatg tccgcttcgt tctgcgaatc
    27301 gtcgaggaac accttccgtt taataacctt cacgccagta ccttgcgcgg cgcgcatcgc
    27361 ctgggtatta ccgatggtta cgctgtcgag gaagtaaaga ttgtaacgct ccagtgcctg
    27421 catcactttc tgcataccaa acaggttaga ggtcatcttg ctacccatgt ggttgttgat
    27481 ccccacggca tagggcacgt tattgaccgc actacgaata atgcgctcaa tttcgtcgct
    27541 gctcatctcc gggcgcagcg tatttttctc cagcggctgt ttactcagtg gtgccatcgg
    27601 gagatgaatc aacacttcgt gcccgctgtt atgcgctttg gtcgccatct ctctggcgtg
    27661 cggtgaatcg ggtaatacag cgacggagat agcggagggc atcgccagca cctggttttc
    27721 gttgtgcggg cgatacccaa aatcatcaat gacgatggca agtttgccag caagtacggg
    27781 ggaggagagc gccaacagag cggcaaatgc aagaacgtta cgacgaaatg gaaacaaaac
    27841 ttatcttccc aaccacggct gtggattgac cgcctgaccc tggcggcgaa tttcgaaata
    27901 gagtgaaggc cgaccctgac cgccactgct gcccaccagt gcaattggct ggcccgcgcg
    27961 aacctgcgaa ccaacgctca ccagtgcgct ctgattatag ccgtaaagac tcatgtcgcc
    28021 tttaccgtgc tcaaccacca ccaccagacc gtaaccttgc agccagtcag ccagaatcac
    28081 tcgaccgtcg gcaattgctt taacttcagt accttcagag gcaccgataa ccatcccttt
    28141 ccagcgtaat tcaccctgta gctgctcgcc atagcgatgc agcgtcggcc cgcgaaccgg
    28201 ccagaatgcc tgaccacgcg gcgcacccag accaccagtt cgggacatca gcgatttttc
    28261 gctttcggtc ggtttgtagg tggtgccttt gcgcgtcgct tctttctggc ggtcgcgaac
    28321 cgcctgggcc tcacgcgctt ctcgttcagc acgcgctttc gccgcggctt ccgcacgggc
    28381 aatgctgtta cgcagacggg attcgttggc acgcagttca cttagctgct gctgaccttg
    28441 ctggatggaa gattccagcc ccgccagcgt ctttttacgc tcgttcagag cctgagtcag
    28501 tttcgcctgt tgggcgcgct gttcatataa cagcgtttgt tgctcgcttt gtttctcttc
    28561 cagttcagca cgctgcatgg cgacttcttc acgcgtttgc ttcaactggg caatggtttc
    28621 ttgtcgcgcc tggttgagat agccgaaata agcctgtaaa cgctgtccac actggctttc
    28681 ttcaccgctg agaattagct gaataccggt atgctcgccc tgacggaatg cggcatccag
    28741 ttgtgcggcg aggctgcgct cctgggcggc tttttgctgc tccagtttgg caatcgacgc
    28801 gttcatctca tcaatctgtt tattgagttg attgagcgtg ttttgcgttt cgcgcagctt
    28861 acgggtggct tcagagatcg cttcttcctg ctttttcaat tgtgcgagca ggcttgcgcg
    28921 ttgttgttgc ttttggcgta ccgcgcgctc ttttgcggcg atatcggcct gaatagattt
    28981 gagttggtca cgctcatccg cgtgggcgga aaaggcgcac aacaatacgc cagcgctaag
    29041 aacgctggcg tagatgatgg gcctgattgc aaacctgcgc ggtttcacgg cccgtgtcat
    29101 ggtattaatc gcctttcccc tcatggggag ggattattcc acgatgaaca gcggcttacc
    29161 agtcatctct tgcgggattt ccatacccat cagcgacaac atggtcggcg cgatgtcaga
    29221 aagtttgccg cctgcaaccg ctttcacgtt cttatcacca acgtaaatca gcggaactgg
    29281 caggttggtg tgtgccgtgt gtgcctgacc cgttgccgga tcgcgcatct gttcagcgtt
    29341 accgtggtca gcggtgatca gcagttgtcc acccacggac tcaaccgctt tcgcgacttc
    29401 ttccacgcag tgatccagtg cttcaaccgc tttaaccgcc gcttccatca ccccggtgtg
    29461 acctaccatg tcgccgttcg gatagttaca gataatggtg tcgtatttgc cgctcttgat
    29521 ggccgcaacc agtttttcgg tcagctctgc ggagctcatt tccggttgca gatcgtaggt
    29581 agccactttc ggtgagttga tcagaatgcg atcttcgcct ttgaatgact cttctacgcc
    29641 accgttgaag aagaaagtaa cgtgggcata tttttcggtt tcggaaatac gcaactgagt
    29701 tttgtcgttt ttcgccatcc actcgccgaa ggtgttaacc agggaagcgg gtgggtaagc
    29761 aaccgcagtt ttgatgtcag cggcgtattc ggtcagcatc acgaaatcga cgttaaccac
    29821 tttcttacgc gcgaagccgt cgaaatctgc gtttacgaat gcacgagtga tttcgcgcgc
    29881 gcggtcagca cggaagttca tgaaaatcag cgcatcgccg tcttccattg ccgcatctgg
    29941 ctgaccttct gcacgaataa cggtcgcttt cacgaactcg tcgttttcgt cgcgagcata
    30001 agctgcctgc aaaccagcaa cggcagtatc ggcctggaac tcaccctgcg ccagagtcag
    30061 caggtcatag gctttttcaa cgcgatccca acggttatcg cggtccatcg cgtagtaacg
    30121 accaatgatg gacgctacgc ggcctttacc cagcgcagca aatttctctt caaatttttt
    30181 cagcgaggat tcagcactgc gcggcggggt gtcgcgaccg tcaaggaatg cgtgcaggta
    30241 gattttttct gcgccgcgtt cagctgccag ttctaccatc gccatgatgt gatcttcgtg
    30301 gctgtgtacg ccgcctgcgg agagcagacc cataatgtgt actgctttac ctgcgttttt
    30361 cgctttatct accgcgccag tcagcactgg attagcaaag aaagcgcgat ctttgatttc
    30421 aacgtccaga cgagtcaggt cctgatacac gatgcggccg gcacccaggt taacgtggcc
    30481 tacttcggag ttacccatct gacggtcagg cagaccgact tccagaccgg aagcgtcgat
    30541 cagggtatgc ggacgattgg cccacagtgc atccattacc ggggttttag cactaaaaat
    30601 ggcgttatcc tgctgttctt cacgatagcc atagccatcc agaatcacca gtaccatagg
    30661 ttttttagaa accgacattg cgacaacctc atactcaaga gtcaaaattt gcgtaatttt
    30721 actacagctg aatcgataaa atagcctctg aagatcaaaa tatacgaccg ctcgcggcaa
    30781 gccgatgcca gatttgcgct tttttttcgt cgtgccccgc aaaattgcat tccagttaac
    30841 gcgctggctg tatttgccgc accgcgcagg tatactcctt tcctggtttt tttaatcact
    30901 acgtcgggag ttgttacccc ccatgcaaga aattatgcaa tttgttggcc gtcatcccat
    30961 actgagtatc gcttggatcg cgttactggt ggcggttctt gtgactacgt ttaagagcct
    31021 gacctcgaaa gtgaaggtga ttactcgtgg tgaagctacg cgtctgatca acaaagaaga
    31081 cgctgtggtt gtggatttac gtcagcgtga tgacttccgt aaaggccata tcgcaggttc
    31141 tatcaatctg ttgccgagcg aaatcaaagc caacaatgtt ggtgagcttg agaagcacaa
    31201 agacaaaccg gttatcgtgg tagacggttc tggcatgcag tgccaggagc ctgcaaacgc
    31261 gctgacgaaa gctggttttg cgcaagtatt cgtgctgaaa gagggcgttg ctggctgggc
    31321 tggcgaaaac ttgcctctgg tgcgcggcaa ataatttacc tgtcgtcttt catgatgcag
    31381 gccgttagct gcaattaggc ccccagcgac ttattgttat aagcttctgg ggacactcca
    31441 ttttgcagcc gccctgcaac atgaaatttc agggtaaaaa aacaggagct aaattatggc
    31501 caatgttgaa atctatacca aagaaacctg cccgtattgc catcgtgcaa aagcactgct
    31561 gagcagcaag ggcgtgagtt ttcaggagtt gccgatcgat ggcaatgccg ccaagcgtga
    31621 agagatgatc aaacgcagcg gtcgcaccac ggttccccag atttttattg acgcacagca
    31681 cattggcggc tgtgatgact tgtatgcatt ggatgcacgt ggtggactgg atcccctgct
    31741 gaaataacgt gtgaacgttg gcattacatt gcgcagtatt taaggacaac acttaagggt
    31801 tttctacaca tgtcagaaca aaacaacact gaaatgactt tccagatcca acgtatttat
    31861 accaaggata tctctttcga agcgccgaac gcgccgcacg ttttccagaa agattggcaa
    31921 ccagaagtta aacttgatct ggatacggca tcttcccaac tggcagatga cgtatacgaa
    31981 gtggtactgc gtgttaccgt aacggcctcc ctgggcgaag aaaccgcgtt cctgtgtgaa
    32041 gttcagcagg gcggtatttt ctccatcgcg ggtatcgaag gcacccagat ggcacattgc
    32101 ctgggcgcat actgcccgaa cattctgttc ccgtatgctc gtgagtgcat caccagcatg
    32161 gtatcccgcg gtacattccc gcaactgaac cttgcgccgg ttaacttcga tgcgctgttc
    32221 atgaactatt tgcagcagca ggctggcgaa ggtactgaag aacatcagga tgcctgatga
    32281 accaacgtaa tgcttcaatg actgtgatcg gtgccggctc gtacggcacc gctcttgcca
    32341 ttaccctggc aagaaatggc cacgaggttg tcctctgggg ccatgaccct gaacatatcg
    32401 caacgcttga acgcgaccgc tgtaacgccg cgtttctccc cgatgtgcct tttcccgata
    32461 cgctccatct tgaaagcgat ctcgccactg cgctggcagc cagccgtaat attctcgtcg
    32521 tcgtacccag ccatgtcttt ggtgaagtgc tgcgccagat taaaccgctg atgcgtcctg
    32581 atgcgcgtct ggtgtgggcg accaaagggc tggaagcgga aaccggacgt ctgttacagg
    32641 acgtggcgcg tgaggcctta ggcgatcaaa ttccgctggc ggttatctct ggcccaacgt
    32701 ttgcgaaaga actggcggca ggtttaccga cggctatttc gttggcctct accgaccaga
    32761 cctttgccga tgatctccaa caattgctgc actgtggcaa aagtttccgc gtttacagca
    32821 acccggattt catcggtgtg cagcttggcg gtgcggtgaa aaacgtcatt gccattggcg
    32881 cggggatgtc cgacggtatc ggttttggtg cgaatgcgcg tacggcactg atcacccgtg
    32941 ggctggctga aatgtcgcgt cttggcgcgg cgctgggtgc cgagcctgcc acctttatgg
    33001 gcatggcggg gctgggcgat cttgtgctta cctgtaccga caaccagtcg cgtaaccgcc
    33061 gttttggcat gatgctcggt cagggcatgg atgtacaaag cgcgcaggag aagattggtc
    33121 aggtggtgga aggctaccgc aatacgaaag aagtccgcga actggcgcat cgcttcggcg
    33181 tagaaatgcc aataaccgag gaaatttatc aagtattata ttgcggaaaa aacgcgcgcg
    33241 aggcagcatt gacgttatta ggtcgtgcac gcaaggacga gcgcagcagc cactaacccc
    33301 agggaacctt tgttaccgct atgacccggc ccgcgcagaa cgggccggtc attatctcat
    33361 cgtgtggagt aagtaatgtc gtgtgaagaa ctggaaattg tctggaacaa tattaaagcc
    33421 gaagccagaa cgctggcgga ctgtgagcca atgctggcca gtttttacca cgcgacgcta
    33481 ctcaagcacg aaaaccttgg tagtgcactg agctacatgc tggcgaacaa gctgtcatcg
    33541 ccaattatgc ctgctattgc tatccgtgaa gtggtggaag aagcctacgc cgctgacccg
    33601 gaaatgatcg cctctgcggc ctgtgatatt caggcggtgc gtacccgcga cccggcagtc
    33661 gataaatact caaccccgtt gttatacctg aagggttttc atgccttgca ggcctatcgc
    33721 atcggtcact ggttgtggaa tcaggggcgt cgcgcattgg caatctttct gcaaaaccag
    33781 gtttctgtga cgttccaggt cgatattcac ccggcagcaa aaattggccg tggcattatg
    33841 ctcgaccacg ccacgggcat cgttgtgggt gaaacggcgg taattgaaaa cgacgtatcg
    33901 attctgcaat ctgtgacgct tggcggtacg ggtaaatctg gtggtgaccg tcacccgaaa
    33961 attcgtgaag gtgtgatgat tggcgcgggc gcgaaaatcc tcggcaatat tgaagttggt
    34021 cgcggcgcga agattggcgc aggttccgtg gtgctgcaac cggtgccgcc gcatacaacc
    34081 gccgctggcg ttccggctcg tattgtcggt aaaccagaca gcgataagcc atcaatggat
    34141 atggaccagc atttcaacgg tattaaccat acatttgagt atggggatgg gatctaatgt
    34201 cctgtgatcg tgccggatgc gatgtaatca tctatccggc atacagtaac taatctctca
    34261 acaacgctcc cggatatccc agctgccgcc aggcttcata caccactacc gacaccgcat
    34321 tggacagatt catgctgcgg ctgtccggca ccatcggaat gcgaattttt tgttcagcgg
    34381 gcagggcatc aagaatgctc gctggcaggc cgcgtgtttc cgggccgaac atcagataat
    34441 cgccatcctg atagcttacg gcgctgtgag caggcgtacc tttcgtggtg agggcaaaca
    34501 ggcgctgggg attttctgct tcgaggaacg cgcgatagtc atgatgacgc gtaacggcgg
    34561 taaactcgtg atagtccagc cccgcgcggc gcaggcgctt atcgtcccag gcaaatccca
    34621 tcggttcgat gatatgcaga cgaaagccgg tattagcgca aagacggatg atgttgccag
    34681 tatttggcgg aatttctggt tcgtaaagta cgatgtttag catactgccc ccttagtgcg
    34741 ggggcaggat agcagaaaat tggtgaaccg tgcggccttt tcccctcacc ccggccctcc
    34801 ccctgtctct tgatcaggag atctgatcaa gagacagctc cctgagggag agggttaggg
    34861 gggtgcccct attaagttgt caagcatgtt atgacccctg cggggtataa aaagtcccgt
    34921 cgcgcatcat ggcgaacaga atgtcgcagc gtcgtctcgc cagggcgata agcgcctgat
    34981 tgtgtcgttt tccctgactc attttgcggg tgtagtaagc cctggagagc ggatccctga
    35041 gcgcggcgaa ggccgacagg aacaacgccc gtttgagagc tttattaccc cgtcgcgagg
    35101 gatgctcacc gcgtattgac gagccggatc gccgagttac cggcgcaagg ccagcataag
    35161 cagcgagatg tgcggcagag gcgaaggcgc ggcaggcgac ctcggtgagg tgtctggctg
    35221 cggtcctgac accgactccg ggcatactgg tcaggaccgg gtaaagaggg tgagcaagaa
    35281 ctcgctgttc tacctcaagc gccacctcgt ctctttgctt acgcagcgtg atgagctgga
    35341 gtgccagacg tggcagtact acggcagcgg cattcgtgcc gggaacgacg acggtttgtt
    35401 cggccagtgc ctgagctatg tctgctgcaa ggcgtttacc cagacgaggc gcaagtttgc
    35461 agagctgggc tgccagcttc ttctcaccca gcgaagcgag tttttctggt gagggatatc
    35521 gctggagaag atcgagtacc gccgggtgct caagtctcgg accgagaacg cgctccagtg
    35581 ccggatgtat ctgggtcaga aggccgcgga tacggttgct ggcctgcgtt gtctgtg
//
LOCUS       DADMIB010000023        35011 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.023, whole genome shotgun sequence.
ACCESSION   DADMIB010000023 DADMIB010000000
VERSION     DADMIB010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35011
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.023"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            44..1270
                     /gene="dsdA"
                     /locus_tag="JNZ89_001099"
     CDS             44..1270
                     /gene="dsdA"
                     /locus_tag="JNZ89_001099"
                     /EC_number="4.3.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001051648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine ammonia-lyase"
                     /protein_id="HAY8935035.1"
                     /translation="MAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFAETAATGGIIE
                     SELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISSSIKARGGIYEVLAHAEKLALE
                     AGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADA
                     RAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAG
                     QRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSP
                     CMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMVRLLDGFYTLSDQTM
                     YDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGG
                     GMVPEEEMNQYLAKGR"
     gene            complement(1378..2916)
                     /gene="emrY"
                     /locus_tag="JNZ89_001100"
     CDS             complement(1378..2916)
                     /gene="emrY"
                     /locus_tag="JNZ89_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrY"
                     /protein_id="HAY8935036.1"
                     /translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI
                     SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL
                     STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI
                     LGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVG
                     GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI
                     GIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK
                     IDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS
                     GLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSS
                     SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTA
                     KGVG"
     gene            complement(2916..4079)
                     /gene="emrK"
                     /locus_tag="JNZ89_001101"
     CDS             complement(2916..4079)
                     /gene="emrK"
                     /locus_tag="JNZ89_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrK"
                     /protein_id="HAY8935037.1"
                     /translation="MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYVYWSMELEDMIS
                     TDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLA
                     NIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTL
                     ISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGY
                     IAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENV
                     VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSM
                     TATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL"
     gene            4495..5109
                     /gene="evgA"
                     /locus_tag="JNZ89_001102"
     CDS             4495..5109
                     /gene="evgA"
                     /locus_tag="JNZ89_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system DNA-binding response
                     regulator EvgA"
                     /protein_id="HAY8935038.1"
                     /translation="MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGASAVQRVETL
                     KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK
                     KEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKD
                     NNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG"
     gene            5114..8707
                     /gene="evgS"
                     /locus_tag="JNZ89_001103"
     CDS             5114..8707
                     /gene="evgS"
                     /locus_tag="JNZ89_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HAY8935039.1"
                     /translation="MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRL
                     SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLRE
                     YADHQKAMDALEEGEVDIVLSHLVASPPLNDDIAATKPLIITFPALVTTLHDSMRPLT
                     SSKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGQNDYFIGSNIITSS
                     MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVVLNEVLNRFVDALTNEVRYEVSQNWL
                     DTGNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMTDENGSVRGVMGDILNI
                     ITLQTGLNFSPITVSHNIHAGTQLNPGGWDIIPGAIYSEDRENNVSFAEAFITTPYVF
                     VMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELD
                     ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPP
                     SEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV
                     IQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENS
                     DSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDHAVYI
                     CGWQDITETRDLIHALEVERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGS
                     GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHS
                     FGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLV
                     HIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNM
                     QGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEHPITLPEKLSILIADDHPTNRL
                     LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSS
                     LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDI
                     EALKNNTANDLQLMQEILITFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANIL
                     NLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND"
     gene            complement(8763..9908)
                     /gene="yfdE"
                     /locus_tag="JNZ89_001104"
     CDS             complement(8763..9908)
                     /gene="yfdE"
                     /locus_tag="JNZ89_001104"
                     /EC_number="2.8.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA:oxalate CoA-transferase"
                     /protein_id="HAY8935040.1"
                     /translation="MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPP
                     GHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDYDKSIFINMLKQADVLAENFR
                     PGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP
                     DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA
                     YIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPR
                     FSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQA
                     RNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS"
     gene            complement(9982..10926)
                     /gene="yfdV"
                     /locus_tag="JNZ89_001105"
     CDS             complement(9982..10926)
                     /gene="yfdV"
                     /locus_tag="JNZ89_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter YfdV"
                     /protein_id="HAY8935041.1"
                     /translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA
                     LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL
                     IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK
                     NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT
                     LAAHKFEFSAEIAYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII
                     IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS"
     gene            complement(10996..12690)
                     /gene="oxc"
                     /locus_tag="JNZ89_001106"
     CDS             complement(10996..12690)
                     /gene="oxc"
                     /locus_tag="JNZ89_001106"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HAY8935042.1"
                     /translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE
                     GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMI
                     SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
                     GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL
                     GKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVML
                     VGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVIGDIASSMQGMLAELK
                     QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSSVRDVLRENQDIYLV
                     NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF
                     GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA
                     FRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN"
     gene            complement(12744..13994)
                     /gene="frc"
                     /locus_tag="JNZ89_001107"
     CDS             complement(12744..13994)
                     /gene="frc"
                     /locus_tag="JNZ89_001107"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HAY8935043.1"
                     /translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV
                     TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI
                     DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP
                     LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL
                     DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN
                     WENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP
                     CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH
                     TAAVLQELGYSDDEIAAMKQNHAI"
     gene            complement(14507..15139)
                     /locus_tag="JNZ89_001108"
     CDS             complement(14507..15139)
                     /locus_tag="JNZ89_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdX family protein"
                     /protein_id="HAY8935044.1"
                     /translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAA
                     AERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKT
                     NLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
                     NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN"
     gene            15435..15710
                     /locus_tag="JNZ89_001109"
     CDS             15435..15710
                     /locus_tag="JNZ89_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935045.1"
                     /translation="MKVNLILFSLFLLVYIMACNVFAFSISGGVSERSYKETEKTSAM
                     TTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYPTKANYLIHPVR"
     gene            complement(15787..16029)
                     /locus_tag="JNZ89_001110"
     CDS             complement(15787..16029)
                     /locus_tag="JNZ89_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdY family protein"
                     /protein_id="HAY8935046.1"
                     /translation="MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY
                     FTMWLTGGNELVTEIFMFLAPACGLMIRFMVGYGRR"
     gene            16382..17302
                     /gene="lpxP"
                     /locus_tag="JNZ89_001111"
     CDS             16382..17302
                     /gene="lpxP"
                     /locus_tag="JNZ89_001111"
                     /EC_number="2.3.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311285.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) palmitoleoyltransferase"
                     /protein_id="HAY8935047.1"
                     /translation="MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRI
                     GAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDS
                     RVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQL
                     MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVEN
                     VATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKII
                     EKEIMRAPEQYLWIHCRFKTRPVGESSLYI"
     gene            17658..17729
                     /gene="ypdK"
                     /locus_tag="JNZ89_001112"
     CDS             17658..17729
                     /gene="ypdK"
                     /locus_tag="JNZ89_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_077777854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YpdK"
                     /protein_id="HAY8935048.1"
                     /translation="MKYFFMGISFMVIVWAGTFALMI"
     gene            complement(17794..19032)
                     /gene="alaC"
                     /locus_tag="JNZ89_001113"
     CDS             complement(17794..19032)
                     /gene="alaC"
                     /locus_tag="JNZ89_001113"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HAY8935049.1"
                     /translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
                     NPDGATPPHIVEKLCTVAQRQDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI
                     VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
                     LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
                     DGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
                     TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWIVEMPKASMYVWAKI
                     PEPYAAMGSLVFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKA
                     MFRADGLLPASSKHIHENAE"
     gene            19409..21105
                     /locus_tag="JNZ89_001114"
                     /pseudo
     CDS             19409..21105
                     /locus_tag="JNZ89_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311287.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
     gene            21120..21854
                     /locus_tag="JNZ89_001115"
     CDS             21120..21854
                     /locus_tag="JNZ89_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY8935050.1"
                     /translation="MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH
                     NRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKP
                     YQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA
                     HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI
                     LRLKDLDFEVPVSRSKVKEFRQLMHL"
     gene            21867..22724
                     /locus_tag="JNZ89_001116"
     CDS             21867..22724
                     /locus_tag="JNZ89_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8935051.1"
                     /translation="MKAPGLPADQQFFADLFSGLVLNSQLLGRVWFASQPASLPVGSL
                     CIDFPRLDIVLRGEYGNLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPT
                     WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL
                     LHLCRNVVNMPPGNSQPRGDFLYHSICNWVQDNYTQPLTRESVAQFFNITPNHLSKLF
                     AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP
                     GEYSARFQG"
     gene            complement(22727..25222)
                     /gene="ptsP"
                     /locus_tag="JNZ89_001117"
     CDS             complement(22727..25222)
                     /gene="ptsP"
                     /locus_tag="JNZ89_001117"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY8935052.1"
                     /translation="MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKA
                     DAKSSLALIGTGTLFNDSCSLNISGSDEEQAQRVLEEYIQVRFIDSDSIQPTQAELTA
                     HPLPRSLSRLNPDLLYGNVLASSVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLA
                     TLAEQLNQQLRESDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQ
                     VCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQ
                     FLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCG
                     VLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIAANIGTALEAPG
                     AFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKS
                     IPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQI
                     LWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMT
                     QYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLL
                     LGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEED
                     VRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVG
                     FGVAIPHTKSQWIRHSSISIARLAKPIDWQSEMGEVELVIMLTLGANEGMNHVKVFSQ
                     LARKLVNKNFRQSLFAAQDAQSILTLLETELTF"
     gene            complement(25247..26284)
                     /gene="ypdE"
                     /locus_tag="JNZ89_001118"
     CDS             complement(25247..26284)
                     /gene="ypdE"
                     /locus_tag="JNZ89_001118"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY8935053.1"
                     /translation="MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGS
                     VLIRLNESTGPKVMICAHMDEVGFMVRSISCEGAIDVLPVGNVRMAARQLQPVRITTR
                     EECKIPGLLDGDRQGNDVSAMRVDIGTRSYDEVMQAGIRPGDRVTFDTTFQVLPHQRV
                     MGKAFDDRLGCYLLVTLLRELHSAELPAEVWLVASSSEEVGVRGGQTATRAVSPDVAI
                     VLDTACWAKNFDYGAANHRQICNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQAD
                     MFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIKRLT
                     RETVVQLTDFR"
     gene            complement(26284..27369)
                     /gene="ypdF"
                     /locus_tag="JNZ89_001119"
     CDS             complement(26284..27369)
                     /gene="ypdF"
                     /locus_tag="JNZ89_001119"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY8935054.1"
                     /translation="MTLLASLRDWLKEQQLDAVLLSSRQNKQPHLGISTGSGYVVISR
                     ESAHILVDSSYFVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSW
                     ETAHRWKSELNAKLVSATPDVLRQIKTPEEVEIIRLACGIADRGAEHIRRFIQAGMSE
                     REIAAELEWFMRQQGAEKASFDTIVASGWRGVLPHGKASDKIVAAGEFVTLDFGALYQ
                     GYCSDMTRTLLVNGEGVSAESHPLFDVYQIVLQAQLAAISAIRPGVRCQQIDDAARRV
                     ITEAGFGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRI
                     EDVVLVTPQGAEVLYAMPKTVLLTGEA"
     gene            complement(27384..28631)
                     /locus_tag="JNZ89_001120"
     CDS             complement(27384..28631)
                     /locus_tag="JNZ89_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HAY8935055.1"
                     /translation="MAIKKRSATVVPGASGAAAAVKNPQASKSSFWGELPQHVMSGIS
                     RMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSF
                     GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPV
                     PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP
                     FGGWINGVIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP
                     VTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA
                     LESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVI
                     TALMVVFLRLMMFRKGKLLIDSL"
     gene            complement(28653..28979)
                     /locus_tag="JNZ89_001121"
     CDS             complement(28653..28979)
                     /locus_tag="JNZ89_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-like phosphotransferase enzyme IIB
                     component 1"
                     /protein_id="HAY8935056.1"
                     /translation="MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGAD
                     GIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEM
                     IASEQQ"
     gene            complement(29198..30163)
                     /gene="glk"
                     /locus_tag="JNZ89_001122"
     CDS             complement(29198..30163)
                     /gene="glk"
                     /locus_tag="JNZ89_001122"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HAY8935057.1"
                     /translation="MIKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
                     IRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
                     AVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGH
                     VDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDI
                     TERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASG
                     FRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL"
     gene            30367..31623
                     /locus_tag="JNZ89_001123"
     CDS             30367..31623
                     /locus_tag="JNZ89_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel protein"
                     /protein_id="HAY8935058.1"
                     /translation="MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASVLQNLLWQR
                     LPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPG
                     LIVALILGLAGGVSLGPEHPIMTINIALAVAIGARLLPRVNRMEWTILASAGTIGALF
                     GTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQM
                     EMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGG
                     PVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVA
                     LGLMLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVML
                     PAWLLLAGKPMMMVNRPKQQPPHDNV"
     gene            31738..32064
                     /locus_tag="JNZ89_001124"
     CDS             31738..32064
                     /locus_tag="JNZ89_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HAY8935059.1"
                     /translation="MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYW
                     DGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERSYREGWRDRDDHRGKGR
                     GHGHRH"
     gene            complement(32205..33443)
                     /gene="mntH"
                     /locus_tag="JNZ89_001125"
     CDS             complement(32205..33443)
                     /gene="mntH"
                     /locus_tag="JNZ89_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mn(2+) uptake NRAMP transporter MntH"
                     /protein_id="HAY8935060.1"
                     /translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQA
                     GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE
                     IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKTLEKVIGGL
                     LLFVAAAYIVELIFSQPNLAQLGKGMVLPSLPTSEAVFLAAGVLGATIMPHVIYLHSS
                     LTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAY
                     LTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLP
                     SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWV
                     IVVLVVALNIWLLVGTALGL"
     gene            33779..34981
                     /gene="nupC"
                     /locus_tag="JNZ89_001126"
     CDS             33779..34981
                     /gene="nupC"
                     /locus_tag="JNZ89_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupC"
                     /protein_id="HAY8935061.1"
                     /translation="MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLA
                     WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
                     ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
                     ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
                     ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG
                     WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
                     LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
                     ASIAALVL"
BASE COUNT         9233 a         8694 c         8081 g         9003 t
ORIGIN      
        1 gtcacggcga actgcctttc aaggttgaag tggcacgacc tcattggctg aaggtttacc
       61 ttatgttggc ctgaccgaac aggatgttca ggacgcccat gcgcgcttat cccgttttgc
      121 accctatctg gcaaaagcat ttgctgaaac tgctgccact ggggggatta ttgaatcaga
      181 actggttgcc attccagcta tgcaaaaacg gctggaaaaa gaatatcagc aaccgatcag
      241 cgggcaactg ttactgaaaa aagatagcca tttgcccatt tccagctcca taaaagcacg
      301 cggcgggatt tatgaagtcc tggcacacgc agaaaaactg gctctggaag cggggttgct
      361 gacgcttgat gatgactaca gcaaactgct ttctccggag tttaaacagt tctttagcca
      421 atacagcatt gctgtgggct caaccggaaa tctggggtta tcaatcggca ttatgagcgc
      481 ccgcattggc tttaaggtga cagttcatat gtctgctgat gcccgggcat ggaaaaaagc
      541 gaaactgcgc agccatggcg ttacggtcgt ggaatatgag caagattatg gtgttgccgt
      601 cgaggaagga cgtaaagcag cgcagtctga cccgaactgt ttctttattg atgacgaaaa
      661 ttcccgcacg ttgttccttg ggtattccgt cgctggccag cgtcttaaag cgcaatttgc
      721 ccagcaaggc cgtatcgtcg atgctgataa ccctctgttt gtctatctgc cgtgtggtgt
      781 tggcggtggt cctggtggcg tcgcattcgg gcttaaactg gcgtttggcg atcatgttca
      841 ctgctttttt gccgaaccaa cgcactcccc ttgtatgttg ttaggcgtcc atacaggatt
      901 acacgatcag atttctgttc aggatattgg tatcgacaac cttaccgcag cggatggcct
      961 tgcagttggt cgcgcatcag gctttgtcgg gcgggcaatg gtgcgtctgc tggatggctt
     1021 ctataccctt agcgatcaaa ccatgtatga catgcttggc tggctggcgc aggaagaagg
     1081 tattcgtctt gaaccttcgg cactggcggg tatggccgga cctcagcgcg tgtgtgcatc
     1141 agtaagttac caacagatgc acggtttcag cgcagaacaa ctgcgtaata ccactcatct
     1201 ggtgtgggcg acgggaggtg gaatggtgcc ggaagaagag atgaatcaat atctggcaaa
     1261 aggccgttaa taacgtttca acgcagcatc gcaatccttt ccctgggtga gcgatgctgc
     1321 cgatggcgca gacttaagat ccccggtctt acccgctata accccctcct tttatcatca
     1381 cccaacgcct ttcgctgtaa acggcggttt cgcaaaccaa accaaaaccg taagtaagat
     1441 aaaagcaata gccgccatac ggaaaatctc atttgcagaa atagaaagtg actgctgggt
     1501 tatttcatta ttaatttcat taagaactcc tgaaagcgaa ccataatatt tatccataat
     1561 ttgtgacgat gaattaaaca cggggttaaa ttgatcgatg gttgctgtca actgactatg
     1621 gtgtaacgat tcgcgtcgtc cccacagcgt cattgtcaac gacgtaccaa ctgatcctga
     1681 caaggtacga aaaaaattac tcatactcga ggcattggca aatttattat ctggcaagcc
     1741 tgaaaacgaa atcgttgtta agggtaaaaa gaaacaggca acggcgaatc cctgaaaaaa
     1801 ctgcggcaaa atgatgcctg taaaatcaat cgttggcata aatgtcacag aacgccagta
     1861 atagcaaacc gcatacatca aaaaactaaa tgtcactaac aaccgcatgt ctattttgtt
     1921 gccataacgt cctatcaaag gtgaaattaa tagtggcatg atgccgatgg gcgcataagc
     1981 aagtccggcc catatcgcat tataccccat cgtttcctgg agtaactgcg gcataaggac
     2041 gatcgctcca gagtaaaata aatacgcgca tgtgatactc acaataccaa tggtgaagtt
     2101 acgggactta aacaaactga gatcaagaat cgggttctct gaggtcgact cccaaatgac
     2161 taaagagatc agagaaataa ctgatactac tgttaatatt attattgtac tcgagttgaa
     2221 ccaatccaga tcgcgccctt tatcaagcat aatttgcaag ccaccaacac cgagcactaa
     2281 cagggtcagt cctggtagat tcattttgac cggtgaagtc tcagtttctc ttcctttaag
     2341 taaggttaag cataatgtca ggacgataat ccccataggg acattgatta aaaatatcca
     2401 accccagcta aagttatcac aaatataacc gcccaatatc ggcccacata tcggagcgat
     2461 aatcacggtc attgaccata atgccagagc aaatgttctt ttttctggcg gataattcct
     2521 taataataaa ctctgtgaca gtggaattaa cggccccgcc attaacccct gaacgactct
     2581 aaaaaatatc agcacatcaa gattggtcga taggctacac attaatgaag acagcgaaaa
     2641 aaaggttact gaaagtaaaa ataatcttaa ttcgcctatt ctttgtgcca acctgccagt
     2701 aacagggatc gcaatggcat ttgctacacc aaacgaggtg ataacccagg tgccttcgtc
     2761 tgttgatgct cccagaaagc cagatattgt cggtattgcg acgttagaaa tagtggaatc
     2821 caacatttgc ataaatgtcg ctaatgacaa tgcaatagtg acgcaccata acgtcccacc
     2881 ggttaatggt gccggagtcg atttagtgat tgccattaaa gttgtccatt atgcgaaata
     2941 atgttgctaa tttctttttc tatcggactg gtatcgataa ctaaagcctt actggtataa
     3001 gccggcatgg aggtcacggt tgaagccagc tcaggcatct cggcaatgtc ttcgttcttc
     3061 gtatcaatag ttgctgtcat cgataaacca atacgcaagg gatgttccat gagttctttt
     3121 ggatcaagag aaacttcaac cggtacacgc tgaacgattt tgatccagtt ccctgtcgca
     3181 ttttgtgcag gtaataagga gaacgcattg ccggttccca tattgatccc tgtcacccga
     3241 ccatgaaaca caacattttc accataaaga tcgctgataa tattgaccga ttgaccaatc
     3301 cgcacatccg tgagttgtgt ttctttaaag ttggcattaa cccacatttg acgtgccggt
     3361 acgacagcca ttaacgattg tccggggctc actgtttcgc cgacctgaac acttctctgg
     3421 gcaatatagc cggtaaccgg actcttaata tccgtacgtt taagcgccaa ccaggcttct
     3481 ttagttgcat ccgccgcttc aacgacttgt ggctgacggt ttaatggtgt gttcattact
     3541 aaagctttat tcgctttata agcctggata gcggcattca atgccgcttt gctacttatt
     3601 aacgtatctt tggtatgctc cagcgtttct tttgaaataa ccccctgctt cgctaacggc
     3661 actcgacggt tataatcttc taaagattgt tgatactgaa tacgtgctga agcgacttcg
     3721 gcactgtatt gtttatcctg taagtatagt ttattcgttt gccgaacaat atttgccaga
     3781 ttatttttag ctttattgag tgcgatagtg gcatcagttt tatccagtga aactaaaatg
     3841 tcaccttgtc gaacgtagtt cgtatcttta tgattaacga cagtgacact acctgagact
     3901 tgtgcagaaa ttggatctgc attccccgtg acataggcgt catctgtact aatcatgtct
     3961 tctaattcca ttgaccaata gacataggca cctgaaaacg caataaataa aactaccgcc
     4021 aataaagaaa agtattttct tctgttagaa tgttttttat ttgaattaat ctgttccact
     4081 attatctctc atttctcata gatgaaattt atgaattgaa tgaaaagagc attcattctt
     4141 catatcaaac acagtgcatg tgttgcacat tatcccagga acgttggagg cctaatttaa
     4201 atgaggtgca aaaaaaacaa cagaggacta aaccgtggct tttgcaatac aattcttacg
     4261 cctgtaggat tagtaagaag acttatagtg ctaacttgaa actataaatc atcggtacaa
     4321 cccctgattt tattgttgac atttcattta tgccgactat ttatatggta tacttgtcga
     4381 attatcttaa aggaagctca gattttctta tttttattga gaaaatgaga tgacgcctta
     4441 tgtctgtatt actacaggga gaagggagat gcttcattgc aaagggaata atctatgaac
     4501 gcaataatta ttgatgacca tcctcttgct atcgcagcaa ttcgtaattt attgatcaaa
     4561 aacgatattg aaatcttagc ggagttgact gaaggggcaa gcgccgttca gcgggtggaa
     4621 acacttaagc ctgatatcgt catcattgat gtcgatatcc ccggagttaa cggtatccag
     4681 gtgttagaaa cgctgaggaa gcgccaatat agcggaatta ttattattgt ctccgctaaa
     4741 aatgaccatt tttacgggaa acattgtgct gatgctggcg ctaatggatt cgtgagtaaa
     4801 aaagaaggca tgaacaatat cattgcggct attgaagctg caaaaaatgg ctactgctat
     4861 ttccccttct ctctcaaccg gtttgttgga agtttaacgt ccgaccagca aaaactcgac
     4921 tccttatcga aacaagaaat tagtgtcatg cggtatattc ttgatggcaa ggataataat
     4981 gacattgctg aaaaaatgtt catcagcaac aaaactgtca gcacttataa aagtcgcctg
     5041 atggaaaaat tagaatgtaa atcactgatg gatctttaca cattcgcgca acgtaacaaa
     5101 atcggctaat cacatgaagt ttttacccta tttttttctt ctctgttgtg gtctttggtc
     5161 gaccataagt ttcgcagacg aagattacat cgaatatcgt ggcatcagta gtaacaaccg
     5221 tgtcacactt gatccagtac gtctgagcaa caaggaatta cgttggttag cgagcaaaaa
     5281 aaatcttgtg attgcagtac acaagtccca aacggctacc ttgttgcata ccgattcgca
     5341 gcaacgggtt cgtggtatta atgctgatta tttaaatctt ttaaaaagag cgttaaatat
     5401 caaattaaca ctccgggaat acgccgatca tcaaaaagca atggacgcgc tggaagaagg
     5461 tgaagtcgat atagtgttat cacatttagt tgcttcgccg cctcttaatg atgacattgc
     5521 tgcaaccaaa ccactgataa ttacctttcc ggcgctcgtc accacccttc acgattcaat
     5581 gcgaccgctt acctcatcaa aaccagtaaa tattgctcga gtagcaaatt atccccctga
     5641 cgaggtaatt catcaatcat ttccaaaagc aacaattatc tcttttacaa atttatatca
     5701 ggcattagca tccgtctcag ccggacagaa tgattacttt attggtagta acatcattac
     5761 cagcagtatg atttcccgct atttcactca ctccttaaat gtagtgaaat attataactc
     5821 accgcgtcaa tataattttt tcttgaccag aaaagaatct gtcgttctta atgaagtact
     5881 caatcgattt gttgatgctt taacaaatga agttcgctat gaagtttcac aaaattggct
     5941 tgatacagga aacctggcct ttctgaacaa accattagaa ctcactgaac atgaaaaaca
     6001 gtggattaag caacatcccg atttaaaggt gctggaaaat ccttactctc ctccctattc
     6061 tatgacggat gaaaatggct cggttcgggg cgttatgggg gatattctta atattattac
     6121 cttgcaaaca ggtttaaatt tttctccgat caccgtttca cacaatatcc atgccggaac
     6181 acagcttaac cccggtggat gggatataat acctggcgct atttatagtg aagatcgaga
     6241 aaataatgtt tcatttgcag aagctttcat aacaacgcca tacgtttttg tcatgcaaaa
     6301 agcacctgac agtgaacaaa cattaaaaaa aggaatgaaa gttgccattc catattatta
     6361 tgagctgcat tcgcaattaa aagagatgta tccggaggtt gagtggataa aagtcgataa
     6421 cgccagcgct gcatttcaca aggtcaagga aggtgaactt gatgctctgg tcgcgacaca
     6481 gctaaattcg cgttacatga tcgatcatta ctatcctaat gaactgtatc attttcttat
     6541 tcccggcgtt ccgaatgcat cgctttcgtt cgcttttcct cgcggagaac cggaacttaa
     6601 ggatattatt aataaagcac tgaatgcaat tcccccaagc gaagttctgc gcctgacgga
     6661 aaaatggatt aaaatgccca atgtgaccat tgacacatgg gacctctata gcgagcaatt
     6721 ttatattgtt acgacattat ccgttttatt agttggcagt agccttttat ggggattcta
     6781 cctgttacgc tcagttcgtc gtcgtaaagt cattcagggt gatttagaaa accaaatatc
     6841 attccgaaaa gcactctcgg attccttacc aaatccaact tatgttgtaa actggcaagg
     6901 taatgtcatt agtcataata gtgcttttga acattatttc actgcggatt actacaaaaa
     6961 tgcaatgtta ccattagaaa acagtgactc accctttaaa gatgtttttt ctaatgcgca
     7021 tgaagtcaca gcagaaacga aagaaaatcg aacaatatac acacaggtat ttgaaattga
     7081 taatggcatc gagaaaagat gcattaatca ctggcataca ttatgcaatc tgccagccag
     7141 cgatcatgct gtttatattt gtggttggca agatattacc gagacgcgtg atttaattca
     7201 tgcactcgaa gtagagagaa ataaagcgat caatgcaact gtcgcaaaaa gtcagtttct
     7261 ggcaacaatg agtcacgaaa taagaacacc aataagctcc attatgggct tcctggaact
     7321 tctgtcgggt tctggtctta gcaaggagca acgggtggag gcgatttcac ttgcctacgc
     7381 caccggacaa tcactcctcg gcttaattgg tgaaatcctt gatgtcgaca aaattgaatc
     7441 gggtaactat caacttcaac cacaatgggt cgatatccct actttagtcc agaacacttg
     7501 tcactctttc ggtgcgattg ctgcaagcaa atcgatcgca ttaagttgca gcagtacatt
     7561 tcctgatcat tacctggtta agatcgaccc tcaggcgttt aagcaggtct tatcaaattt
     7621 actgagcaat gctctcaaat ttaccaccga gggggcagta aaaattacga cctccctggt
     7681 tcacattgat gacaaccacg ctgttatcaa aatgacgatt atggattctg gaagtggatt
     7741 atcgcaggaa gaacaacaac aactctttaa acgctacagc caaacaagtg caggtcgcca
     7801 gcaaacagga tctggcttag gcttaatgat ctgcaaagaa ttaattaaaa atatgcaggg
     7861 cgatttgtca ttagaaagtc atccaggcat aggaacaaca tttacgatca caatcccggt
     7921 agaaattagc cagcaagtgg cgactgtcga ggcaaaagca gaacacccca tcacactacc
     7981 tgaaaagttg agcatattaa tcgcggatga tcatccgacc aacaggctat tactcaaacg
     8041 ccagctaaat ctattaggat atgatgttga tgaagccact gatggtgtgc aagcgctaca
     8101 caaagtcagt atgcaacatt atgatctgct tattactgac gttaatatgc cgaatatgga
     8161 tggttttgag ttgactcgca aactccgtga gcaaaattct tccttaccca tctgggggct
     8221 tacagccaac gcacaggcta acgaacgtga aaaagggtta agttgcggca tgaacttatg
     8281 tttgttcaaa ccgttgaccc tggatgtact gaaaacacat ttaagtcagt tacaccaggt
     8341 tgcgcatatt gcacctcagt atcgccacct tgatatcgaa gccctgaaaa ataatacggc
     8401 gaacgatcta caactgatgc aggagattct catcactttc cagcatgaaa cgcataaaga
     8461 tctacccgct gcgtttcaag cactagaagc tggcgataac agaactttcc atcagtgtat
     8521 tcatcgcatc cacggtgcgg ctaacatcct gaatttgcaa aagttgatta atattagcca
     8581 tcagttagaa ataacacctg tttcagatga cagtaagcct gaaattcttc agttgctgaa
     8641 ctctgtaaaa gaacacattg cagagctgga ccaggagatt gctgttttct gtcagaaaaa
     8701 tgactaaata gcggctccca caatgttcaa atgtgggagc tatttaccag cacatcttac
     8761 atttatgatg agaactcctg gcgaatttgt tccccatgct ggtcgagcgt tgccgctccc
     8821 ggcataacat gcgggtccgc gcagccgctg atttttatcg gattacccgg catcattatt
     8881 cccccggctt caatcaacat atttctcgcc tgagtttgtg gcaatttaat ggcctcagcc
     8941 acacttaata acggcgcgac gggtacacca acttcatgta ttctggctaa ccaaacttca
     9001 gctgcctgcg tttttaacgt ccgctcaata tattgtttaa gaatagcctg gttttgtacg
     9061 cgtaaaatat tgctgctaaa tcggggatca ttaaccagtt ccgtaagctc cagtgcctgg
     9121 cataacgcag aaaaaagctt gtcattacca caacaaatcg taatcggctt atcctgagta
     9181 ttgaaaacat caaaaggtgc catgtaggga tggcgatttc ccagacgttg tggtgacttc
     9241 cctgtcgcga tatatgccat cagaccatgc tccagaaaac tcagcgtggc atcaaacatc
     9301 gctatatcga catgcgcccc tctctggctc ttttcgcggc cataaagtgc actcactatt
     9361 ccgctgaata aatagacacc gccgcataga tccgcaagag atgtaccaac gcgcactggc
     9421 ggagcatcag gatatcctgt ttccatcatt atcccgctca ttgcctgaat gatggtatcg
     9481 taggcaggag catcttttag cggaccggta tgtccgaaac ctgacgatga agcatatatg
     9541 aggcgcgggt tgatttcttg aagcgtttcc catgaaaacc ccagtttttc cattgtacct
     9601 gggcgaaaat tctcagctaa tacatcagct tgtttgagca tatttataaa tatactttta
     9661 tcgtaatcat tctttaaatc aagaaccaca ctctctttgc catgattaat aaaactgtaa
     9721 tagagtgact gtccatccac atagggacca aatgtgcggg tatcatcacc atgacccggc
     9781 ggctcaactt taattaccct tgcgcccata ttacaaagaa gttgagttcc gaaaggtcca
     9841 ttaaggacat gtgtcatatc gataactaat aagccttcaa acggcccttt gctttcatta
     9901 tttgtcattt gcttatgcct tgaaaaaagc cgaaggtgaa aagacacttc ggcatttatg
     9961 taaaatcaat aacatgatta attatgaaac cagtcgactg acataaatcc acaagggagc
    10021 cgtgacgaca aagcccagta cgctcacagc caatgacgct gtaccagtac gggtgtagac
    10081 attaaaccgg ctggcaataa taattccgga gaatgccggc ggtaatgcgc ctgccagtac
    10141 catcatctgc agatgttcgc tgttcaaatg acatgccata ccaacgagaa gcagtgccag
    10201 tggcatcaga atcagcttca ggaaggtgtt ataagcaatt tcggcactga actcgaattt
    10261 atgtgcagcc agagtcaacc ccgcagcgaa taccgctacc cctgagttag ccttcgcaat
    10321 cagattaaag gttgggtccc atgctgccgg aatttttacc ccaaccaaca ccaggatcgt
    10381 tgccagaaca ggtgcccata ctactggctc ctttgccgca gaaattaatg cactcagatt
    10441 actattcttc ttaccatccg ctcctgaaga aggattcagc aaatacagac caataggaat
    10501 agtaattgcg ttaacaataa tagaaataat tgctaccact aaacctgttg atacggaatc
    10561 accataaata ggatcgagaa ctgcaaaccc caggaatcca atggtaggtg aacctgcaat
    10621 taatgcacat acagctgctt ctgcatgggt acgtttaaaa aatttgtagc aaccgaacca
    10681 ggagaaaaag aaacatccga caataaccac aagtgataca agggtcagac gagtgtccgc
    10741 aaaaatcatt tccctgtttg cccgagtaat agatacaaat agagccgcag gaagcgcgta
    10801 gtttaatacc agtttattaa atgcgcgggc ttgatcttct gaaaaagttt ctcgtctgcc
    10861 gctaaaataa cccaacagca tgattacgat aataggcaat aaatcgccaa taaaaaatgt
    10921 tagcataata gtatttccga taagggtccc ctcaccatcg cataatgagt tggcaagagg
    10981 agacgatgtc agtatttaat taccagcgac ttgttttggg ttaagtttgg taatatggcc
    11041 actttcagtt cctgctgcag ggtcgatgac cacattaata atggtcggtt tgcgcgactg
    11101 aataccggtg gttaaagcat gacgaagttc atctgtcgtg gtgacgttat agccaacgcc
    11161 acgaaacgca tccattaatt tgtcatacct tgcatggtgc aacagatccg ttggagatgg
    11221 tgcaccagcg ccactgagat caacaccgtc tcctctgtag atgccgccat tattaaaaat
    11281 aacgatcgtc accggcaggt tatatcgaca aatcgtttca atttccatcc cactgaaacc
    11341 aaaagcacta tcaccttcaa tggcgacaac cggagaacca gaagtcacgc tagcaccgat
    11401 ggcatagccc ataccgatgc ccatgacacc ccaggtacca caatccagac gacgacgtgg
    11461 tttatacata tcaataatat ttcgtgcatt atccagggta tttgcacctt cattaactaa
    11521 ataaatatcc tggttctcgc gcaatacgtc gcgcacagaa cttaatgcat taaagtaatt
    11581 taatggttga gtatctgtac ttaatttttc atgcattttt tgtgcatttt gctgcttgtg
    11641 gatatttaaa atatcgcgcc ataccagtgg agtcgtaaat gtgttttgtt tcagttctgc
    11701 cagcatacct tgcatactgg atgcaatatc accaatgact ggcacagcaa tggggcggtt
    11761 gctgtcaatt tcctgcggtt caatatccag ttgaataaac tgtgtatctg ccgcccatcc
    11821 ttttttaccg tgtgccaata accaattcag tcgtgcacca acaagcatga caacgtcagc
    11881 atttgccagg gcaaacgaac gcgcagctgc cgcagaaagt ggatgcgtat cttcaaggat
    11941 ccctttcgcc atagacattg gcaggaatgg aatctgagca ctttcaataa attcacgaag
    12001 ctgttcatca gcttgtgaat acgccgcgcc tttgccaagg ataattaatg gccgttcagc
    12061 ttttgctaaa agcgaaattg cgctagtgac tgacttcggg catggcaata atgctggcga
    12121 cggattttca actttaacaa tcgtggttaa cgcttcgtct ttttccatcg tcgcggccag
    12181 gacatttgct ggcaaatcaa gataaactcc gccagggcga cccgatacag agacccggat
    12241 agcgcgtgcc aatgcaatgc caagatcctg cggctgatta acgcgaaatg ctgctttggc
    12301 atacggtttt gccgcattca tttggtccag ctcttcataa tcaccttgct gtaggtcgac
    12361 gatcgcgcgg tcgctggagc cgctaatcat gatcatcgga aaaccattta ccgttgcgtt
    12421 ggccaatgcc gtcaaaccat tgaggaatcc tggcgcagaa actgtcaggc agatccccgg
    12481 tttttgggta agaaaaccgc ttgccgcagc ggcatagcct gccgactgct catgacgaaa
    12541 accaatataa cgaatgcctt ccgcctgggc atggcgtgcc atatccgtca caggaatacc
    12601 tacaacacca taaatagtgt caatattatt ctgttttaat gcttcaacga tgatatgcat
    12661 accatctgtc atttgaagtt gatctgacat gattaataac ctcgaaattt ttataaattg
    12721 ggagccagaa gcccccgtta atatcagatg gcgtggtttt gcttcattgc agcaatttca
    12781 tcgtcgctat aacctagctc ctgcaataca gcagcggtat gttcacctaa tagcggcgca
    12841 gctttaatat ccggcgtaaa agcagagaat ttcattggac aaccaacggt cagatatttt
    12901 ccacgcaacg gttgttccac ttcaacaaca ctgccacttt ggcgcaaaga gggatcaagt
    12961 gaaatttctt tcatacttaa aaccggtgca caaggaatat caaactgagt caaataggcc
    13021 accgcttcat gtttatcaat agtgacagtg tatttttcga tttcagcaaa aatatcgaaa
    13081 atatgtggct gtcgggcatg ggctgtactg tatgccggat cggtaatcca ttctggtttg
    13141 ccgatggctt tacaggtgtt ttcccagttt tgctcctgaa tagtgaaata aatataggcg
    13201 ttcggatcgg tttcccagcc tttacatttc aggatccagc caggctgacc gccaccacct
    13261 gcattaccac cgcggggaac tgcatcacca aatgtaccat tcggatactg cgggtattct
    13321 tccagataac ccaatttatc gagacgctgc tggtcacgta atttcacgcg gcaaaggttc
    13381 aatacggcat cctgcattga catggtgact cgttgcccac gccccgtttt ttcgcgatgc
    13441 agcaaagcag caagcaaacc gatcagcaaa tgcattccgg tgttgctgtc acccaacgct
    13501 gcagcgctta ccagcggcgg accatcccaa aaacccgtag tggatgccgc gccacccgct
    13561 gcctgagcaa cgttttcata ggcttttaca ttcacataag gcgaacactc atcaaaccct
    13621 ttgatcgaac caaaaatcag acgtggattg atttcttgaa tatgctccca ggtgaagccc
    13681 atgtgatcaa tggcccctgg atgaaagttc tcgactaaga tatcagcttc gcggatcagc
    13741 ttttccatta cctctttgcc ttccgctgtt ttggtattta actcaataga acgtttgtta
    13801 ctgttaagca tggtgaagta aagcgcatcg atatcaggaa tatctcgcag ctggtgacgc
    13861 gttacgtcac caacgccggg acgttcaatt ttaataacgt cagcgccaaa ccaggccagc
    13921 atttgagtac aagatgggcc agattgcaca ccggtgaaat cgagaacttt aattccttga
    13981 agtggagttg acatagcaat acctattagt taattaaata tgtgttaatt tagcgtttat
    14041 ttaaggcgta atatcttcta taaataaccc gcaaaatatc gtcgtagctg cactcgatat
    14101 ttttaaaatc ctgtatcaag tgctgaaaat catttcatcg ccacttccaa ttcctttctg
    14161 catggtaagt agtgaggacg aaaagaagaa tatgataaat attgattcgt ggtaatcaga
    14221 gagagtcgcg acatttgtga tgttattctt acaactgtaa gaagcgccgg tgatttacaa
    14281 gtaagggtat gattacgctt tttaaagcgt accataaaac ataacataat aaatgatttg
    14341 tgatgacacg ggattattgg ggtttacttt gaggaagata aaatgcgtgt ttatagaacc
    14401 gcgagcgcca aataatttta tgaccacaac ctgtcgtatt gtggtcataa aaaattgtcg
    14461 gctggaggga gttaaatcct ttacctcaat atactgcctg tcagcattag ttcacaaaca
    14521 gtgcttcgct gtcgacgatg attccatctt ccgcaccttt cagcgccagg tttgcctcgt
    14581 agtattgctt tttatcaagc agtttctgcg catcagcaag tgcattacga gtctgtttaa
    14641 gcggcatcag atattggttt tccattacgc caacaccggc caggcgaagt tcttccattg
    14701 cgcccttttt atcccctttc gccatttttt cattggcaat ttttatcgcg gcttcttttt
    14761 cgggagttgc tacataactc tcagaaattc cgacagatgc attaatgaca atatattggt
    14821 catcattgag attggtcttt ttacctggct tagcgaactt tgcccattcg gtactgtcat
    14881 ctgacagcaa agcggaagct tcattggtca gttcttttgc cttttctgga tcgccatgaa
    14941 acagagccag gcgcgctacc tgcacgtcac gcatcgcata taaaccttgt tcagagatac
    15001 gctctgctgc tgccgttttc tgggtttgct gaacttgctg agtttgctgt tgtgccgcta
    15061 ccggtgcatt atcagcagcc catacagttg aagatgccag aattgctgtg accatcgtag
    15121 ccataattaa acgtttcata cttacctcat tctttaacag ttttagaaaa cgccgccatc
    15181 atattgggtg agcatgaaat gagaaatcag agagcaacgg tcattttgaa agggttatct
    15241 tacagttgta gttattatcg caagaagtat tttagtctta caattgtagg aatctgcttc
    15301 ctgtcgcaga gaactattct tatgtaccac aaagagatgt catttattat atcgatgtaa
    15361 atattgatta attatatgta aatacagcca taacatcgta ggttctcagt gaaccatttt
    15421 caggataact ttctatgaaa gtaaacttaa tacttttcag cttattttta ttggtctata
    15481 ttatggcatg caatgttttt gcattttcca tttctggtgg tgtaagtgag aggagctata
    15541 aagagactga aaaaacatca gcgatgacga ccacacactc tacaaaactt cagccatcac
    15601 aggcgatttt gtttaagatg agagaagatg cgccaccatt aaacctcaca gaagaaatca
    15661 cgcctactta tccgacaaag gcgaattatc ttattcatcc tgtgcgatag cgtctgtcac
    15721 atggcaggtg aacaatcatg tctgatgctg atgtgaacac ctgcccaaat gagccatcct
    15781 gacccactat cgcctgccat accccaccat aaagcgaatc atcaagccac aagccggggc
    15841 aagaaacata aatatctccg tcactagttc attaccgcca gttaaccaca tggtgaagta
    15901 ataaatgagt gcagcgagga tcaccatgcc gaagaaagaa gagaccgccg ataccacgtt
    15961 cagtacctga ccgatgtagc cgcttacgca gacaatacac agggcgagaa acatccataa
    16021 ataaatcata gctcaacctc ctgccgcgct aaaaaacctg taacttcagt cactttaata
    16081 gtaagacaat ccttaacctc tggcaatttt tgctaagcat caatgaaaac agcatgttaa
    16141 atgcaagact gttgtgtacg gaaaaatatt tactttgcac gattaataat cagtagctga
    16201 aagcagtcag cgagtgataa agtacagata ccgcattcat gctcctcgtg gttatgtcct
    16261 gactagtctt tacacacttt acaggaacca ttgtcgtaca tgatggccca accaattgag
    16321 tgtaccgctg tcgacatgga atcttctgcg atacaacaat tcgtatctac agaaggtaac
    16381 tatgtttcca caatgcaaat tttcccgcga gtttctacat cctcgctact ggctcacatg
    16441 gtttgggctt ggtgtactct ggctttgggt acagcttcct tatcctgttc tctgctttct
    16501 cggcacgcgt attggcgcaa tggcgcgacc attcctgaaa cgtcgtgaat ctatcgcccg
    16561 taaaaacctg gaactttgtt tcccgcagca ttctgcggaa gaacgcgaga agatgattgc
    16621 cgaaaacttt cgttcactcg gcatggcgct ggtagaaacc ggcatggcat ggttctggcc
    16681 cgacagtcgc gtacgtaaat ggtttgatgt tgaagggttg gataacctta aacgcgcaca
    16741 aatgcaaaat cgcggcgtaa tggttgtcgg cgtccatttt atgtcgctgg aactgggcgg
    16801 ccgcgtgatg ggactgtgcc aaccaatgat ggctacctat cgtccacata ataatcagct
    16861 gatggaatgg gtgcagaccc gtgggcgcat gcgctctaac aaagcgatga tcggcagaaa
    16921 taatctgcgc ggcattgtcg gtgcactgaa gaaaggtgaa gcggtatggt ttgctcccga
    16981 tcaggattat ggtcgtaaag gcagctcctt cgcgccgttc tttgcggtgg aaaatgtcgc
    17041 cacaaccaat ggcacctatg ttctctcccg tctctctggc gcagccatgt tgaccgtaac
    17101 gatggtaaga aaagcggatt acagcggata tcgtttgttc atcaccccag agatggaagg
    17161 ctacccgaca gatgaaaatc aagccgctgc ctatatgaac aagattatcg agaaagagat
    17221 catgcgcgca ccggagcagt acctctggat ccactgtcgc tttaaaacgc gcccggtggg
    17281 agaatcgtcg ttgtacattt aacaaactgc tcttactctt tccctcctca aatcggccat
    17341 aataacctca tggtttttat ggcttttttc ttaaggtttt ttccttcgct gaatatctaa
    17401 ttattaccgt cagaaattaa actgtcgccg atatgagaca cttgtaagtt actaaaagta
    17461 aataagaaaa tgcctcttgt ctcgtttcag ttttaggcgt acattagcgc cgtctcgagc
    17521 agtttagctc agaattctgg ggtgatgccc acggtaaaat acagggcttt taaggtcgct
    17581 ttgcccagtg tcaactcact gtatcaggtg taatgaagtc attcaggcgt aacagcaatt
    17641 acgcggagag atgtaaagtg aaatatttct ttatgggcat ttcttttatg gtcatcgttt
    17701 gggccggtac ttttgccctg atgatctaaa agcaaactgt gcaatgaaaa acaggagcca
    17761 tcaggctcct gtttgcattt ctgacgacgg tgtttattcc gcgttttcgt gaatatgttt
    17821 gctgctggcg ggtagtaaac cgtcggcacg gaacatcgct ttaatccctc tgatggcctg
    17881 acgaatacgg tcgcggtttt caatcagtgc aaagcgaaca tgcgtatcac catagtcgcc
    17941 aaagccaatc cccggcgaga cacagacctt cgcttcgtta agcaatttct tggcaaatac
    18001 cagcgagccc atggcagcat acggttccgg tattttcgcc cagacataca tcgaagcctt
    18061 cggcatttca actatccagc ccgcttcatg cagcccttta accaatacat cacggcggcg
    18121 tttgtactgt tcggcaatgt cgcgcacgca ctgttgatcg ccctccagcg ccgcaatcgc
    18181 cgccacctgc aacggcgtaa aggtgccgta atcgtgatag cttttaatac gagccagggc
    18241 gctgaccagc gttttgttgc caaccataaa gccgatacgc cagcccgcca tgttgtagct
    18301 tttcgacagc gtaaagaact cgactgccac atcgcgtgca cccggtacct gcatgattga
    18361 cggcgctttc cagccatcgt agacgatatc ggcataggcc aggtcgtgga ccaccagcac
    18421 atcgtagcgt ttcgccagcg ccacaacctt ttcgaagaac tccagctcca cgcattgcgc
    18481 ggttggattc gacgggaagc cgaggatcat catcttcggt ttcggataac tttcacgaat
    18541 ggcgcgctcc agttcgttga agaaatcgac accttccacc agcggcactg agcgtacctg
    18601 cgccccggca atcaccgcgc cataaatatg gatcgggtaa cttggattcg gcaccagcac
    18661 cgtgtcacca tgatccagcg tcgccagcat cagatgcgcc aggccctctt tcgaaccaat
    18721 agtgacgatg gcttctgatt ccgggtcgat ttcaacgtcg tagcgatcct gataccagcg
    18781 ggaaatggcg cgacgtaacc gcggaatgcc gcgtgaagtg gagtaaccat gcgtgtcctg
    18841 gcgctgggcc acagtacata atttttcgac gatatgcggc ggagtcgcac cgtccgggtt
    18901 acccatgctg aaatcgataa tatcttcgcc gcgccgacgc gcagccattt tcagttcagc
    18961 ggtgatgtta aaaacgtagg gcgggagacg atcaatgcgc gtaaagcgac gttcagggcg
    19021 agtgtcagcc ataatttcct cagattaacg ttagcgcccg gaccgtccga gcgacgctgc
    19081 cacaatggtg gctgttttga aaatagcctg attaatttct gtctgtccag cgttttagaa
    19141 catttttatc aatggcttta aatgaggaac tccacttcaa aaacaggaaa tttttctacg
    19201 ctaacaagaa aattaccacc aattttatta acattataat ttcaataaat ttaccagcca
    19261 gaagtgcatt atcaagagat acattgctaa tacaccattt atctttcaat ccccttttaa
    19321 atttatggtt tttcctcaaa aacggcctgc tggtcatcag ccttcaggtt acctatcata
    19381 gaggtttaat ccttattcag agtcacccgt gcacgaaata ttcaacatgc tgctggcggt
    19441 cttcgatcgg gcagcgttaa tgcttatctg cctgttcttt ctcatccgta tccgcctgtt
    19501 tcgcgagctg ttgcacaagt cggcacactc cccaaaagag ttgcttgctg ttaccgccat
    19561 tttctcgctg ttcgccctgt tcagcacctg gtccggcgtt cccgtagaag gctcgctggt
    19621 gaacgtacgt attatcgcgg tgatgtccgg cgggattctg tttggcccgt gggtaggcat
    19681 cattaccggc gtgattgcgg gtattcaccg gtatttaatt gatatcggcg gcgtgacggc
    19741 gatcccctgc tttatcacca gcattctggc gggttgtata tcaggctgga taaacctgaa
    19801 aatccccaaa gcacagcgct ggcgcgtcgg tattctcggc ggcatgttgt gtgagacgtt
    19861 gaccatgatt ctggtaattg tctgggcacc aactaccgcg ttggggatcg atatcgtctc
    19921 taaaatcggc attccaatga tcctcggtag cgtctgtatc ggctttattg tgcttctggt
    19981 gcaaagcgtt gagggcgaaa aagaggccag cgccgcgcgg caggccaagc tggcgctgga
    20041 tatcgccaac aaaacgctac cgctgtttcg ccatgtcaat agcgagtcat tacgcaaggt
    20101 ctgcgaaatt atccgcgatg acattcacgc cgatgcggtg gcgattacta ataccgatca
    20161 tgtgctggcc tatgttggcg tgggtgaaca taactatcag aatggcgatg acttcattag
    20221 cccgactacc cgtcaggcga tgaattacgg aaaaatcatc attaaaaaca atgatgaagc
    20281 ccaccgcaca ccagagattc attccatgct ggtgatccca ttgtgggaga aaggcgttgt
    20341 gaccggaacg ctgaaaattt actactgcca cgcgcatcag ataacctcgt cattacagga
    20401 aatggcggtt ggtctgtcgc aaatcatctc cacgcaactg gaggtttcac gcgccgagca
    20461 gctacgtgaa atggcaaata aggcagagct tcgcgccctg caaagcaaaa ttaatcccca
    20521 ttttctgttt aacgctctga acgctatttc atcgtcaatc cgtctgaatc cggataccgc
    20581 tcgccagttg atctttaatc tgtcgcgtta tctgcgctat aacattgaat taaaagacga
    20641 tgagcaaatc gatatcaaaa aagagctgta tcaaattaaa gactatattg ccattgagca
    20701 ggcccgcttt ggtgacaagc tgacggttat ctatgatatt gatgaagagg tgaattgctg
    20761 cattcccagc ctgctgatcc agccgttggt ggagaacgcc attgtccacg gtattcagcc
    20821 ttgcaaaggt aaaggcgttg tcaccatcag cgttgcagag tgcggaaatc gggtacgcat
    20881 tgcggtgcga gataccggca cggcatcgat ccaaaggtga ttgagcgggt cgaagcgaat
    20941 gaaatgccgg gcaataaaat tggcctgctg aatgtccatc atcgcgtgaa gttattgtat
    21001 ggcgaggggc tgcatatccg ccgcctggag ccggggacgg aaattgcgtt ttacattcct
    21061 aaccaacgca ccccagtcgc ctcacaggct acgttattgc tttgagccgg agtgatattg
    21121 tgaaagtcat cattgttgaa gacgaattcc tggcacaaca ggaactgagc tggctaatta
    21181 aagagcacag ccagatggag attgtcggca cctttgacga cggtctggac gtgttgaagt
    21241 ttttgcagca taaccgcgtc gacgccattt ttctggatat caatattccg tcgctggatg
    21301 gcgtgttgct ggcgcaaaac atcagccagt tcgcccataa accgtttatt gtgttcatca
    21361 ccgcgtggaa agaacatgcg gtagaagcgt ttgaactgga ggcgtttgac tacattctca
    21421 aaccgtatca ggagtcacgt attaccggga tgctgcaaaa actggaagcg gcctggcaac
    21481 aacagcagac cagcagtacg cctgccgcga cggtaacgcg tgagaatgac accattaatc
    21541 tggtgaaaga tgagcgaata atcgtcacgc caattaacga tatctattac gccgaagcgc
    21601 acgagaaaat gacctttgtc tatacgcggc gtgaatccta cgtaatgccg atgaacatta
    21661 ccgaattttg cagcaaactg ccgccgtcgc attttttccg ctgccatcgc tcattttgtg
    21721 tcaatctgaa caaaatacgc gaaatcgaac cgtggtttaa taacacctac attctgcgac
    21781 tgaaagatct ggattttgaa gtgccggtca gccgcagcaa agtgaaagaa tttcgccagt
    21841 taatgcatct ttaatcggga actttcatga aagcaccagg cttgcccgcc gatcaacaat
    21901 ttttcgccga tctgttcagc ggcctggtgc ttaactcgca actactgggg cgcgtctggt
    21961 ttgccagcca gcctgcctcg ttaccggtgg gcagtttatg tattgatttt ccccgtctgg
    22021 atatcgtgct gcgcggcgaa tacggcaacc tgctggaagc aaagcagcag cgaatggtgg
    22081 aaggagaaat gctgtttatt ccggcacgcg cggctaattt accgatcaac aacaaaccgg
    22141 tgatgctgtt aagcctggtg ttcgcaccga cctggcttgg gttatcgttt tacgatagcc
    22201 gcaccacgtc gttgttgcat cctgctcgcc agatccagct tcccagcctg caacgcggtg
    22261 aaggtgaagc gatgcttacc gccctcactc atcttagccg ttcgccgctg gagcagaata
    22321 tcattcagcc actggtgtta agtttgctgc atctttgccg caacgtggtg aatatgccgc
    22381 cgggtaattc gcaaccgcgc ggcgattttc tctatcacag catttgtaac tgggttcagg
    22441 ataattatac ccagccgctc acccgcgaga gcgtggcgca gttttttaat atcacgccca
    22501 atcatctgtc aaaactgttt gctcagcatg gaacgatgcg ttttatcgag tatgtgcgtt
    22561 gggtgcgaat ggcgaaggcg aggatgattt tgcagaaata tcatctgtca attcatgaag
    22621 tggcacagcg ttgcggtttt ccggatagcg actatttttg tcgcgttttc cggcgtcagt
    22681 ttggtctgac gccgggagag tacagcgccc gttttcaggg ctaacgtcag aaggttaatt
    22741 ctgtttccag cagcgtcagg atactttgtg catcttgcgc ggcaaacaac gactggcgga
    22801 agtttttatt caccagttta cgcgccagct gcgagaagac tttcacatga ttcatccctt
    22861 cgttagcacc cagcgtcagc atgatcacca gttcgacttc gcccatttct gactgccagt
    22921 caatcggttt cgccagccgg gcaatgctga tactggaatg acggatccac tgagatttgg
    22981 tgtgcgggat cgctacgcca aaaccaacgc cggtggtaac aatctcttcc cgctgccaga
    23041 catcttcttc cagctcaaac ggatgttcag tgcgcccgtt aacgccgagg ttgccgcaca
    23101 ggaactggat cgcctgctct ttattgctaa aatcctgatc aacaaagata ttctccagcg
    23161 ccagcagtgg gcgaacgtct tcttccggcg taaaggcggt gagtaacgct tcaatttcct
    23221 gcgcactgcg gcattcacat gcctgacgcg ccagttcccg acacgcctcg ctatccagtt
    23281 gacgaagctg gcttttcacc gccggaatac gcgggctact catactcagc tcatccaggc
    23341 ccagcccaag cagtagcggc agataacggc tttcaccgcc cagttcaccg caaatgccta
    23401 cccatttgcc ccgctgatgc gcagtggtaa ctatttgctg caacatgcgc aggaacgatg
    23461 gcgtaatcgg gttatatagc ggcgatacgc gcgggttatt acgatcgacc gcatacagat
    23521 actgggtcat atcgttggag ccgatactga agaaatcgac ctcatcgcag aagtggtcga
    23581 tgatgtagca caccgacggc acttccacca tgatcccaag cgtaatcgtc tctgcatgac
    23641 gcaggccatc gcgcttaagc tcaacgatcg ctttttggat ctcgcccttc acccataaga
    23701 tctgatcgag actgtggacc atcgggatca tcaactgggc gttgccaaaa ctggcggcgc
    23761 gcaaaatcgc ccgtagttga gtgcggaaca ggccagcaaa ttccgggtaa atacgtaccg
    23821 cgcgatagcc gaggaacggg ttctcttcct ggggaatatt cagataagga atgcttttat
    23881 cgccaccgat gtccattgtg cggaagataa tcggcttgtc gcccgctgcc agtagcacct
    23941 gctggtaggc ttcaaattgc tcctgctcgt ccggcgcgct gtcgcgatcc atatagagca
    24001 tttcagtacg gaacagtcca acgccttccg cgccgttggc aaacgcgcct ggcgcttcca
    24061 gagcggtgcc gatattcgcc gcaatatcaa tacgcttgtt atcacgggaa taggccagct
    24121 gcgcggcggc ctgcgcctgt tgtttttggc gtttatccgc cagcgtctgt gcgacctgat
    24181 aataaccgct caccgcgtca ttcgggttaa tcgccagcac gccgcactgg gcgtcaagca
    24241 ccgccggttg cccggcataa cgggcaatcg catccagcgg caggccgctc agtaccggga
    24301 tcgccgaggc gcgggccaga atcagggtat gcgaggtgcg cccagttttc tccagaatca
    24361 tgcctgcaag attttttaaa tcgaggctca aaaactggct tggggttaaa tcctcggcta
    24421 ccagaatagt cggtttttcc agcaccagat tgttgcgcgg cttcagttcc ggccaggtga
    24481 tatgcagcaa ctgttcgcta atatcgcgaa tgtcgctaac acgttcgcgc agataatcac
    24541 tggcagaagc agaaagtttg gcgcaaacct gctccatatt gctgatgatc gccgccccca
    24601 gcccttgatg ctgttctgtc atcagacgac ggatattgcc cgcgaattca tcatcctgaa
    24661 tcagcgacaa atgggcgcta aggatagttt tgctttcgcc gtcactctca cgcaattgct
    24721 ggttcagttg ctcggcaagc gttgcaaggc tgtgctccag ccgggtggaa tcttgcgcac
    24781 tggcggggat tgcccgataa ctgtcgaggc tgtcgctttg taacagggtc agcgtaccca
    24841 cgccgacgct gcttgccagc acattgccgt acagtaaatc cgggttcagg cggcttaatg
    24901 aacgcggcag cggatgcgcc gtcagttctg cctgcgttgg ctggatgctg tcgctgtcga
    24961 taaagcgcac ctggatgtac tcttccaaca cgcgctgcgc ctgctcttca tcgctgccgc
    25021 taatgttcag gctgcaactg tcattaaata aagtaccggt gccaatcagc gccagcgagc
    25081 ttttcgcatc ggcctttgcg ttctggcgat ggttgataaa ggtgatttcg ctttgccact
    25141 ggctgcactg ttctttaagt tcccacgccg gacgagcatg aagaccgttt ggcaaaggac
    25201 agagaaattg aatcgttaac ataaccgctc cgggttaatc aggagatcat ctgaaatccg
    25261 tcagttgaac aaccgtctca cgcgtaagac gtttaataag ggcagataaa agctgctgca
    25321 tctgcaaaat gtcacggcaa tcggcaatcg atgcggcgca atgtccgtgg cgggttgctg
    25381 gccccatcac cactgtaggc acgccggtgc cggttaagtg caccgctccg ccgtccgtgc
    25441 cgccgttgct gaacatatct gcctgtaacg gcacgccaat ttctgccgcc acggtttcga
    25501 tccacgcggt aagttttggc ggcgcaatca gcgacttgtc gcttaacacc agcatcggcc
    25561 cgttacaaat ctgacgatgg ttagccgcgc cataatcaaa gtttttcgcc cagcaggcgg
    25621 tatcaagcac aatggcgaca tccggcgaca ccgcgcgggt ggcagtttgc ccgccgcgta
    25681 cccccacctc ttcgctggaa ctggccacca gccacacttc cgcaggcagt tcagcgctgt
    25741 gtagttcgcg cagtaacgtc accagcaggt agcaaccgag gcggtcatca aaggctttcc
    25801 ccatcacccg ctggtgaggg agaacctgaa aagttgtatc aaaggtgacg cgatcgcctg
    25861 gacgaattcc cgcctgcatc acttcgtcat acgagcgcgt accaatgtcc acgcgcatgg
    25921 cgctgacgtc attcccctgc cggtcgccgt caagcaggcc tggaattttg cactcttcac
    25981 gggtggtgat gcgcaccggc tgcagctggc gggcagccat gcgcacgttg ccaaccggca
    26041 gcacatcaat tgccccttcg caggagatgc tgcgcaccat aaatcccact tcgtccatat
    26101 gggcgcagat catcaccttc ggccctgtcg attcattgag gcggatcagc accgatccca
    26161 gaccatcaaa tcgcacttct ttttgcaggc gatccgcttc ttccagcagg atctgccgca
    26221 cttcctgttc cgaggaggcg atcgcatctg cctcgctcaa cgcttttaat agcgataaat
    26281 ccattatgcc tctcccgtga gcaacactgt tttcggcatg gcgtagagca cttctgcgcc
    26341 ttgcggggta accagcacaa catcttcgat gcgcacgccc ccttgccctg gcaaataaat
    26401 ccccggctcc acggtcagca acatgcctgg ctgtagcgtc gtggtgtccc gcggtgaaaa
    26461 acgcggatct tcatggactt caatgccgat agcgtgacca gtgttatgac cgaaatagtc
    26521 gccaaatcca gcctcggtaa tgacccggcg cgcggcgtcg tcaatctgct ggcagcgcac
    26581 gccggggcga attgcagaga ttgccgcgag ctgtgcctgc aggacaatct gatagacgtc
    26641 aaacagcggg tgagattcgg cgctcacccc ttcgccattc accagcaagg tgcgcgtcat
    26701 atcagagcag tagccctgat acagcgcacc aaaatcgaga gtgacaaact cgcccgctgc
    26761 aacaatcttg tcgctggctt tgccgtgcgg cagcaccccg cgccagccgc tggcgacaat
    26821 ggtgtcaaaa gaggcttttt ctgcgccctg ctggcgcata aaccactcca gttcagcggc
    26881 tatctcgcgc tcgctcatcc ccgcctgaat aaagcggcga atatgctccg ctccgcgatc
    26941 ggcaatccca caggcgaggc ggattatctc cacctcctct ggcgttttga tttgccgcag
    27001 cacatccggc gtggcgctaa ccagtttcgc attgagttca gacttccagc ggtgcgcggt
    27061 ttcccaactc acctgctggc cttcaaaacc gagcgtttgc aactgctcat cggcaatgat
    27121 ttgattgacg atagtggtaa gcgtgttcgt cgcgtcaagc aaatgcagct ggtagccttg
    27181 cgcacgggct tccacctcaa cgaaatagct cgaatctacc agaatgtgcg cactttcacg
    27241 gctaataacc acatagcctg atccggtgga gatccccaga tgcggctgtt tgttctgccg
    27301 tgaggagaga agcactgcat ccagttgttg ctccttaagc cagtcgcgca gcgaagcgag
    27361 taatgtcatc tggattttcc ttcttacagg ctatcgatta acaatttgcc tttacggaac
    27421 atcatcagac gcaggaacac caccatcagc gcagttatga ctgcccccag cgcgatcccc
    27481 gccatataga cgccaaggtt agtgaccagc ggccatgccc agatagcgga ttccgggaac
    27541 cattgcactg cgcccagcca gacagcggcg gttgagccga caatcgcgcc gaccatatac
    27601 gacggaatgg cggtgatggg gctttccagc gcaaacggaa tcgcaccctc actaatcccc
    27661 ataaaggcaa ggaacatcgc ggtcttaccc tgcggataaa gttgagcgtt gaacaggcgt
    27721 ttgccggtta aacgacggtc aataatggtc gccagcccca gaccaatcgg aggaataacg
    27781 atagcgatag aacgagcggt gaccggtaat acgtggtcag tggtaaagct gaaggcaacg
    27841 aaacctgcgg ctttgttgat cgggccacca aggtcgattg ctgtcgccgc ggcgatcccc
    27901 attgcgtaca tcagcgcgcc cttctcacct gcggcagtca gcacggtacg gataacgccg
    27961 ttgatccagc cgccaaaggg ggtaatgacg tagtacatcg ccagcatgac aaaaatggcg
    28021 gaaagaatcg gtagcaaaaa tgtggttttg aacgctaaca ggaaatccgg taactggatt
    28081 ttctggttca tccacttcac aaggtaaccc gcgacgatag aaataatcag cgcaccaatg
    28141 aaggtggacg gcaccggcga agaggtcgcc cattgcatag tgctgggatc gaagttcagc
    28201 agttgcgtcg gctgggtaga catcaagccg ccgataaaac cagccgggaa cgccagtttg
    28261 ccaccgatag agttcgccac aaaagcagca aacatcggaa tggcaaaacc aaacaacacg
    28321 ccgccgaagg actgcgacag ccaggcaaat ttcagtaagg agaggtcgaa accggagaat
    28381 ttcccgctat taagagcatc catgatgccg atctcagcag gaattttaag ccagctataa
    28441 gcaatcagct ggctgaaagc gaggatcaca ccgcccataa ttaaggtcgg caccatgcgt
    28501 gaaatccctg acatcacatg ctgcgggagt tcaccccaga agctgctttt agaggcctgc
    28561 ggattcttaa ctgccgctgc cgcaccggat gcgccaggca caacggttgc actgcgtttt
    28621 ttaatggcca taacaattat ccctgtcgaa tattactgtt gttcagaggc aatcatctct
    28681 tcgatttctt tgatgatgcc cgcagcgttt ttaattgcgt cctgcaaagt gatttcataa
    28741 acgtcgcgtg attcgaaacg ctcattatct tccggggtaa ctgccacgga gtggatgatg
    28801 atggttgctt cggcgatatc ctgcgccgtc aggcgattct ggataccgtc cgcgccctgg
    28861 gtttcaattt tcacttcata accggcttct accgccgctt cttccaacgc ctgagcggcc
    28921 ataaaggtgt gagccaggcc cattgggcag gcacataagg caatcagttt cttactcatc
    28981 gttaattcct cattcagtga tagttgacaa gtgaaattat gaacgtgcaa aacaaatcgc
    29041 cgttaccaga caaataatgc atttactgga gaattaatcc cgctgtacgg aagtgtgacg
    29101 caggtcggcc ttgtgagggg acacaaagaa aaattgaatt aactgtatga tttaaacgat
    29161 tatcgggaga gttacctccc gatataacag gaaggattta cagaatgtgc cctaaggtct
    29221 ggcgtaaatg tgcaccggaa ccgagaagac ccggattgtc atggacgatg agatacaccg
    29281 gaatatcatg gacatattct ttaaagcgcc ctttatcttc aaatgcagca cggaaaccag
    29341 aggctttgaa gaactcaagg aagcgcggca cgataccgcc cgcaataaac acgccgccaa
    29401 atgtcccgag attgagcgcc agattgccgc caaaacggcc cataatgacg caaaacagcg
    29461 acaacgcgcg gcggcaatcg gtacagctgt cagccagcgc gcgttcggta atatcttttg
    29521 gcttgagatt ttctggcagg cggttgtcag ctttcacaat tgcgcgatac aaattcacca
    29581 gcccagggcc agaaagcacg cgctccgccg aaacatgacc aatttccgca cgcaatattt
    29641 cgaggataat ggcctcttct tcactattcg gcgcaaaatc aacgtgaccg ccttcgcccg
    29701 gcaagcttac ccaacgctta tcgacatgga ccagatgcgc aaccccaagc cctgttccgg
    29761 caccgtaaac cgcaataggt ttaccttcta ccggttctgc gccaccaaac tgaatcagat
    29821 gctctttttt cagcatcggg atcgccatcg atacagcggt aaaatcgtta ataatttcca
    29881 gatggctaaa accgagattc tttttcattt cggcaattga gaacgcccag gtatggttgg
    29941 tcattgccac ccagtcaccg gtaattgggc aagcgatggc aatacagccg tctttcacct
    30001 cgaccttatg ttcttcaaga taaacgcgaa tgaccgcttc gaggctgggg taatcaagcc
    30061 ctgaataggt cttagcctgc gagatttcac cactggcaat atcacacaga gcaagacgtg
    30121 cgttggtgcc gcccacatca ccgactaatg catactttat cattcttcaa ctgctccgct
    30181 aaagtcaaaa taattctttc tcacactgta aatacctggg ggcataacaa caacgccgga
    30241 aaggcaggct ccctgtaaat atcgatctgg gtcacacatt tactttatcg tttcagcacc
    30301 aattgcagcg atgccttttt gcaagctggg caaactaagt atctgacccc gcataaggaa
    30361 tagaacatgc tccatccgcg agccagaacc atgttgttat tatcgctccc cgccgtggca
    30421 attgggattg cgtccagtct tattctgatt gtggtgatga aaatcgcctc ggtattacag
    30481 aatttgctct ggcaacgact gccgggaact ctggggatag cccaggattc acctctctgg
    30541 atcatcggtg tattaacgct aacgggtatt gcggtggggt tggttatccg tttcagccag
    30601 ggtcatgccg gaccagaccc cgcctgtgaa ccgctgatcg gcgcaccagt tccgccctct
    30661 gcgctaccag gacttatcgt agcattaatt ctcggtcttg ctggcggcgt cagcctgggg
    30721 ccggaacatc cgatcatgac catcaatatc gcccttgccg tcgccattgg cgctcgtctg
    30781 ttaccgcgcg tcaaccgaat ggagtggact attttagcct ctgccggaac catcggcgcg
    30841 ctgtttggca cacctgttgc agcggcgttg atattttcgc aaaccttaaa tggcagtagt
    30901 gaagttccgc tatgggatcg tctctttgcg ccgttaatgg cggcagcagc tggtgcacta
    30961 actaccggat tatttttcca tccccatttt tcactgccca ttgcgcatta cggacagatg
    31021 gaaatgaccg atattctcag cggtgcaatt gtcgcggcga ttgccatcgc agcagggatg
    31081 gtcgccgtat ggtgcttacc acggttgcac gcgatgatga atcaaatgaa aaatccggtg
    31141 ctcgtgctgg gtattggcgg atttattctc ggtattctgg gggttattgg tggaccagtt
    31201 tcgctgttta aagggctgga tgagatgcag cagatggtgg caaatcaggc tttcagcacc
    31261 agcgattact ttttgctggc ggtaattaaa cttgccgccc tggtcgttgc tgccgccagt
    31321 ggctttcgcg gtgggcgaat cttcccggca gtgtttgtcg gcgtggcatt agggttgatg
    31381 ctgcatgagc acgtacccgc cgtaccagcg gcaataaccg tttcttgcgc tattctcggc
    31441 atcgtgctgg tggtaacacg cgatggctgg ttaagtcttt ttatggcggc ggtcgttgta
    31501 cccaatacca cattgctacc gctgctctgt atcgtcatgc ttccggcatg gctgttatta
    31561 gcaggtaagc cgatgatgat ggtcaatcgt ccgaagcaac agccacccca cgataacgtt
    31621 tagcaaaaaa tgctctcctt tatgatttaa gagttatggc gatgatacgg ggctttacct
    31681 ccccgtaata ttgcgttaac aggccgctga cggcttcgat cgtgaaggag aataacaatg
    31741 ttcaggtcac tgtttctggc ggccgccctg atggcattta ccccgcttgc agcaaacgca
    31801 ggtgaaatca ccctactgcc atcaatcaaa ttacaaattg gcgatcgcga tcattacggt
    31861 aattactggg acggtggtca ctggcgcgac cgtgactact ggcatcgcaa ttatgagtgg
    31921 cgcaaaaacc gttggtggcg tcatgataat ggctatcatc gtggctggga taagcgtaaa
    31981 gcgtatgagc gtagctatcg tgaaggctgg cgcgatcgtg acgatcatcg cggaaaaggc
    32041 cgcggacatg gacaccgcca ttaaacacat tcgccaatgg agcacaatgc ctgatgcgac
    32101 gctagcgcgt cttatcaggc ctacaaaccg gatctttaac gcgtagggcg gataaggcgt
    32161 ttacgccgca tccgccaata gtgccagatg cgacgctcat tcaactacaa tcccagcgcc
    32221 gtccccacca acaaccagat attcagcgcc acgaccagca ctacaatcac ccagcctgtc
    32281 tgttttacgc gtttgctgtt caccagatcg cccatcaact tgctgtcact ggtgaaaatc
    32341 agcagtggaa ccagcgccag ggcgatacca aaacttaaca gcacctgact cataaccaga
    32401 atccgtgtcg gatctaatcc catcagaatg acaataaatg acggcagcat ggtgactgta
    32461 cgacgcaccc acagcgggat atggaagcga atgaacccct gcatcaccac ctgccctgcc
    32521 agtgtcccca ctaccgttga ggacagtccg gcagcaacca gacttaaccc aaagaccgtt
    32581 gccgcagcat ggcttaacag cggttgcagc gtcagataag cctcatcaag atcggcaaca
    32641 ccagtatgac cagaaaagtg gaacgccgcc gcagctgtag ccatcatcgc cagattgaca
    32701 aaaccggcaa tagtcatggc gatagccaca tcccatttgg tggcggaata acgttgttga
    32761 cgcgaaccgc catgtaaatg ctgagtgagc gaggagtgca aataaatcac atgcggcata
    32821 atcgtcgccc ctaacacgcc tgctgccagg aagaccgctt ccgaagtagg taaactcggg
    32881 agcaccattc ctttacccag ctgcgccagg ttaggctggg agaaaatcaa ctcgacaatg
    32941 taagccgcgg caacaaacaa cagtaacccg ccaatcactt tctccagcgt tttttgcccg
    33001 cgacgttgca gcattaaaat caggaaagtc gcgatccccg tcagcaccgc gccctgcaac
    33061 aacgaaacac caagaatgag tttaaaaccg atcgccgcac caataaattc cgccaggtcg
    33121 gttgccatcg caataatttc tgcctgaacc caatagaacc acactacggg acgcggatag
    33181 tgatcgcgaa tctgctccgc cagattttta ccggtggcaa tccctagttt ggcagagagg
    33241 atctgaatca gcatcgccat caggttggcc caaacgacaa cccacagtag ctgatagccg
    33301 aagctggcac ccgcctgaat attggtcgca aagttaccgg gatcgatata accaatcgcc
    33361 gcaatgaacg caggtcccat taatgcgagc ctcatcttgc gcgccgcccg tccgctgcta
    33421 ctctcaacgc gatagttcgt catcttgtgc ctctaaaaca tagcctttgc tatgtttcat
    33481 gctatgataa acgagaatga ttatcaaatt catttaaatg gattgtggtg atttctgtga
    33541 tagaccagga ttatgactac gaaaagattg atgacttgaa tgttatggtt atgtttaatg
    33601 ttagcacatt tacataactt tcagcttcca tacacaacat agcagaaatg tatgacagat
    33661 cactattttt gaagcctgtc acaggacgtc attatagtgt gtgtcagatc tcgttttcct
    33721 taaccatgtt acatagaatg tgcacggaaa tttaacctgc ctcatatttg gagcaaatat
    33781 ggaccgcgtc cttcattttg tactggcact tgccgttgtt gcgattctcg cactgctggt
    33841 aagcagcgac cgcaaaaaaa ttcgtatccg ttatgttatt caactgcttg ttatcgaagt
    33901 gttactggcg tggttcttcc tgaactccga cgttggttta ggcttcgtga aaggcttctc
    33961 cgaaatgttc gaaaaactgc tcggatttgc caacgaaggg actaacttcg tctttggtag
    34021 catgaatgat caaggcctgg cattcttctt cctgaaagtg ctgtgcccaa tcgtctttat
    34081 ctctgcactg atcggtattc tccagcacat tcgcgtgttg ccggtgatca tccgcgcaat
    34141 tggtttcctg ctctccaaag tcaacggcat gggcaaactg gaatccttta acgccgtcag
    34201 ctccctgatt ctgggtcagt ctgaaaactt tattgcctat aaagatatcc tcggcaaaat
    34261 ctcccgtaat cgtatgtaca ccatggctgc cacggcaatg tccaccgtgt cgatgtccat
    34321 cgttggtgca tacatgacca tgctggaacc gaaatacgtc gttgctgcgc tggtattgaa
    34381 catgttcagc acctttatcg tgctgtcgct gatcaaccct taccgtgttg atgccagtga
    34441 agaaaacatt cagatgtcca acctgcacga aggtcagagc ttcttcgaaa tgctgggtga
    34501 atacattctg gcaggtttca aagttgccat tatcgttgcc gcgatgctga tcggctttat
    34561 cgccctgatc gctgcgctga acgcactgtt tgccaccgtg actggctggt ttggctacag
    34621 catctccttc cagggcattc tgggctacat cttctatccg attgcatggg tgatgggtgt
    34681 tccttccagt gaagcactgc aagtgggcag tatcatggcg accaaactgg tttccaacga
    34741 gttcgttgcg atgatggatc tgcagaaaat tgcttccacg ctctctccgc gtgctgaagg
    34801 catcatctct gtgttcctgg tttccttcgc taacttctct tcaatcggga ttatcgcagg
    34861 tgcagttaaa ggcctgaatg aagagcaagg taacgtggtt tctcgcttcg gtctgaaact
    34921 ggtttacggc tctaccctgg tgagtgtgct gtctgcgtca atcgcagcac tggtgctgta
    34981 agaccataca taaaaaagcc ggggataatt c
//
LOCUS       DADMIB010000024        34821 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.024, whole genome shotgun sequence.
ACCESSION   DADMIB010000024 DADMIB010000000
VERSION     DADMIB010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34821
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.024"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..90)
                     /locus_tag="JNZ89_001127"
     CDS             complement(<1..90)
                     /locus_tag="JNZ89_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HAY8935062.1"
                     /translation="MNKEEQYLLFALSAPMEILNQGCKPAHDSP"
     gene            complement(171..1598)
                     /locus_tag="JNZ89_001128"
     CDS             complement(171..1598)
                     /locus_tag="JNZ89_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HAY8935063.1"
                     /translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETEPQGFKQLRQ
                     AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY
                     CSMEEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAI
                     AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKL
                     HRNLLRWYSAGRLDIPELLDYARSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCD
                     YWREYPSTQADALILQWCRQHRVDYYPLVVMMIEARELVNDQGKQLLYVPGDSARTRF
                     HLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHLLWPLYLVAKQLVQASQPT
                     EESLMPIVSRLDAEDRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDDGGPGC
                     LGVIKIIFYIFIFAGLIGKILHLFG"
     gene            complement(1595..2302)
                     /locus_tag="JNZ89_001129"
     CDS             complement(1595..2302)
                     /locus_tag="JNZ89_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HAY8935064.1"
                     /translation="MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS
                     WGIDDRDDLLRTIHRMIENGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV
                     ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
                     YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQP
                     LADYPTCPETLKDMSDL"
     gene            2465..3442
                     /locus_tag="JNZ89_001130"
     CDS             2465..3442
                     /locus_tag="JNZ89_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HAY8935065.1"
                     /translation="MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSP
                     DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKTALQGHTFASN
                     ALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
                     QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGE
                     GVDQDYKQAMYWYLKAAAQESVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDA
                     TAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL"
     gene            complement(3512..3994)
                     /locus_tag="JNZ89_001131"
     CDS             complement(3512..3994)
                     /locus_tag="JNZ89_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon-containing protein"
                     /protein_id="HAY8935066.1"
                     /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT
                     RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR
                     EVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
                     "
     gene            4229..6811
                     /gene="leuS"
                     /locus_tag="JNZ89_001132"
     CDS             4229..6811
                     /gene="leuS"
                     /locus_tag="JNZ89_001132"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HAY8935067.1"
                     /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
                     SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
                     DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
                     NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKS
                     MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP
                     ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA
                     VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH
                     EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL
                     PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPEY
                     KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ
                     GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
                     NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA
                     KGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
                     TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED
                     STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
                     LVVG"
     gene            6826..7407
                     /gene="lptE"
                     /locus_tag="JNZ89_001133"
     CDS             6826..7407
                     /gene="lptE"
                     /locus_tag="JNZ89_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HAY8935068.1"
                     /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN
                     GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM
                     TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
                     SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN"
     gene            7407..8438
                     /gene="holA"
                     /locus_tag="JNZ89_001134"
     CDS             7407..8438
                     /gene="holA"
                     /locus_tag="JNZ89_001134"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HAY8935069.1"
                     /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA
                     QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG
                     LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL
                     ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
                     DALLMGKSKRTLHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
                     RVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK
                     PLADVFIDG"
     gene            8440..9081
                     /gene="nadD"
                     /locus_tag="JNZ89_001135"
     CDS             8440..9081
                     /gene="nadD"
                     /locus_tag="JNZ89_001135"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HAY8935070.1"
                     /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP
                     HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL
                     AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNQED
                     LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR"
     gene            9105..9713
                     /locus_tag="JNZ89_001136"
     CDS             9105..9713
                     /locus_tag="JNZ89_001136"
                     /EC_number="3.1.3.73"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin/alpha-ribazole phosphatase"
                     /protein_id="HAY8935071.1"
                     /translation="MRLWLIRHGETQANIDGLYSGHAPPLTARGIEQAQNLHTLLHGV
                     SFDLVLCSELERAQHTARLVLSDRQLPVQIIPELNEMFFGDWEMRHHRDLMQEDAENY
                     SAWCNDWQHAIPTNGEGFQAFSQRVERFIARLSEFQHYQNILVVSHQGVLSLLIARLI
                     GMPAEAMWHFRVDQGCWSAIDINQKFATLRVLNSRAIGVDNA"
     gene            9973..10290
                     /gene="rsfS"
                     /locus_tag="JNZ89_001137"
                     /gene_synonym="rsfA"
     CDS             9973..10290
                     /gene="rsfS"
                     /locus_tag="JNZ89_001137"
                     /gene_synonym="rsfA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308702.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HAY8935072.1"
                     /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
                     SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK
                     LWS"
     gene            10294..10761
                     /gene="rlmH"
                     /locus_tag="JNZ89_001138"
     CDS             10294..10761
                     /gene="rlmH"
                     /locus_tag="JNZ89_001138"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HAY8935073.1"
                     /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
                     KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI
                     GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
     gene            10792..12693
                     /gene="mrdA"
                     /locus_tag="JNZ89_001139"
     CDS             10792..12693
                     /gene="mrdA"
                     /locus_tag="JNZ89_001139"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-transpeptidase MrdA"
                     /protein_id="HAY8935074.1"
                     /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
                     VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
                     DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
                     YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL
                     HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT
                     DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
                     YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF
                     YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
                     VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH
                     SGYWELAKDGMYGVANRPNGTTHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
                     RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN
                     PAVAAAEDH"
     gene            12696..13808
                     /gene="mrdB"
                     /locus_tag="JNZ89_001140"
                     /gene_synonym="rodA"
     CDS             12696..13808
                     /gene="mrdB"
                     /locus_tag="JNZ89_001140"
                     /gene_synonym="rodA"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004885876.1"
                     /note="rod shape-determining protein RodA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase MrdB"
                     /protein_id="HAY8935075.1"
                     /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG
                     MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
                     LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL
                     GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE
                     SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
                     ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
                     PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
     gene            13819..14907
                     /gene="rlpA"
                     /locus_tag="JNZ89_001141"
     CDS             13819..14907
                     /gene="rlpA"
                     /locus_tag="JNZ89_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic peptidoglycan transglycosylase RlpA"
                     /protein_id="HAY8935076.1"
                     /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS
                     GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD
                     PTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN
                     NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILP
                     VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPA
                     MVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP
                     FASKAEASTLQQRLQTEAQLQSFITTAQ"
     gene            15047..16258
                     /gene="dacA"
                     /locus_tag="JNZ89_001142"
     CDS             15047..16258
                     /gene="dacA"
                     /locus_tag="JNZ89_001142"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="HAY8935077.1"
                     /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI
                     DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN
                     DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
                     LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT
                     FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG
                     REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDMYLTIPRGRM
                     KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
                     YIKLMFHHWFG"
     gene            16369..16632
                     /locus_tag="JNZ89_001143"
     CDS             16369..16632
                     /locus_tag="JNZ89_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HAY8935078.1"
                     /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT
                     PTVKPSSKGNYHSVSITINATHIEQVEILYEELGKIDIVRMVL"
     gene            16733..17374
                     /gene="lipB"
                     /locus_tag="JNZ89_001144"
     CDS             16733..17374
                     /gene="lipB"
                     /locus_tag="JNZ89_001144"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415163.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HAY8935079.1"
                     /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY
                     PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV
                     TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL
                     SPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA"
     gene            17633..18586
                     /locus_tag="JNZ89_001145"
     CDS             17633..18586
                     /locus_tag="JNZ89_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HAY8935080.1"
                     /translation="MDSNNQIEPCLSRKSSEGKPQIFTTLRNIALNLLTIFEAVYVHK
                     GIVNAAKVLNLPPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES
                     ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQL
                     SQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL
                     PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP
                     LEKLPFPSLNKEQIDFSIHYNKFSLRDPILHGVIDVIRNAF"
     gene            18795..19760
                     /gene="lipA"
                     /locus_tag="JNZ89_001146"
     CDS             18795..19760
                     /gene="lipA"
                     /locus_tag="JNZ89_001146"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HAY8935081.1"
                     /translation="MSKPIVMERGVKYRDADKMALIPVKNVAIEREALLRKPEWMKIK
                     LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
                     VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS
                     PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
                     ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
                     RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
     gene            complement(19861..20064)
                     /gene="tatE"
                     /locus_tag="JNZ89_001147"
     CDS             complement(19861..20064)
                     /gene="tatE"
                     /locus_tag="JNZ89_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatE"
                     /protein_id="HAY8935082.1"
                     /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN
                     DDDAAAKKGADVDLQAEKLSHKE"
     gene            complement(20193..20981)
                     /locus_tag="JNZ89_001148"
     CDS             complement(20193..20981)
                     /locus_tag="JNZ89_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminated glutathione amidase"
                     /protein_id="HAY8935083.1"
                     /translation="MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLA
                     RDDHDADLSVKSAQLLEGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAG
                     NIVARYAKLHLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQA
                     LQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPF
                     GVTIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL"
     gene            21074..21457
                     /gene="crcB"
                     /locus_tag="JNZ89_001149"
     CDS             21074..21457
                     /gene="crcB"
                     /locus_tag="JNZ89_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HAY8935084.1"
                     /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIG
                     AFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
                     VFVNLLGSFAMTALAFWLFSASTAH"
     gene            complement(21512..21721)
                     /gene="cspE"
                     /locus_tag="JNZ89_001150"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(21512..21721)
                     /gene="cspE"
                     /locus_tag="JNZ89_001150"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HAY8935085.1"
                     /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
                     AEGQRVEFEITNGAKGPSAANVIAL"
     gene            complement(21896..22456)
                     /locus_tag="JNZ89_001151"
     CDS             complement(21896..22456)
                     /locus_tag="JNZ89_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid:lipid A palmitoyltransferase"
                     /protein_id="HAY8935086.1"
                     /translation="MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAPTWQQ
                     PEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDS
                     WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP
                     VTFQMTYIPGTYNNGNVYFAWMRFQF"
     gene            23045..24430
                     /gene="dcuC"
                     /locus_tag="JNZ89_001152"
     CDS             23045..24430
                     /gene="dcuC"
                     /locus_tag="JNZ89_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HAY8935087.1"
                     /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI
                     MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
                     VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
                     AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW
                     QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI
                     CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ
                     SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY
                     LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM
                     VPGTAAAVTGK"
     gene            complement(24471..25151)
                     /gene="dpiA"
                     /locus_tag="JNZ89_001153"
                     /gene_synonym="citB"
     CDS             complement(24471..25151)
                     /gene="dpiA"
                     /locus_tag="JNZ89_001153"
                     /gene_synonym="citB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component response regulator DpiA"
                     /protein_id="HAY8935088.1"
                     /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM
                     MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF
                     DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID
                     PLTLNAVRKLFKEPGVQHTAETVAQALTISRTSARRYLEYCASRHLIIAEIVHGKVGR
                     PQRIYHSG"
     gene            complement(25120..26777)
                     /gene="dpiB"
                     /locus_tag="JNZ89_001154"
                     /pseudo
     CDS             complement(25120..26777)
                     /gene="dpiB"
                     /locus_tag="JNZ89_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308685.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase DpiB"
     gene            27126..28184
                     /gene="citC"
                     /locus_tag="JNZ89_001155"
     CDS             27126..28184
                     /gene="citC"
                     /locus_tag="JNZ89_001155"
                     /EC_number="6.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
                     /protein_id="HAY8935089.1"
                     /translation="MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTR
                     DEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYE
                     ALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNG
                     HRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISR
                     ATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMR
                     YWLKTPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQ
                     NLLEHSRQDAAARQKTPA"
     gene            28199..28495
                     /gene="citD"
                     /locus_tag="JNZ89_001156"
     CDS             28199..28495
                     /gene="citD"
                     /locus_tag="JNZ89_001156"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HAY8935090.1"
                     /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA
                     IRTTILDVLARYNVRGVQLNVDDKGTLDCILRARLEALLARASGIPTLPWEDCQ"
     gene            28492..29400
                     /gene="citE"
                     /locus_tag="JNZ89_001157"
     CDS             28492..29400
                     /gene="citE"
                     /locus_tag="JNZ89_001157"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HAY8935091.1"
                     /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
                     DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL
                     PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI
                     ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA
                     AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG
                     KMVDGPVIDRARLVLSRAELSGIREE"
     gene            29411..30943
                     /gene="citF"
                     /locus_tag="JNZ89_001158"
     CDS             29411..30943
                     /gene="citF"
                     /locus_tag="JNZ89_001158"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HAY8935092.1"
                     /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR
                     KLCANLEEAIHRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSD
                     CHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNI
                     DVAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASI
                     EQEQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT
                     GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA
                     QSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRG
                     ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR
                     PELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV
                     KE"
     gene            30947..31497
                     /gene="citX"
                     /locus_tag="JNZ89_001159"
                     /pseudo
     CDS             30947..31497
                     /gene="citX"
                     /locus_tag="JNZ89_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308680.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
     gene            31472..32299
                     /gene="citG"
                     /locus_tag="JNZ89_001160"
     CDS             31472..32299
                     /gene="citG"
                     /locus_tag="JNZ89_001160"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005056457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase CitG"
                     /protein_id="HAY8935093.1"
                     /translation="MSMPATSTKTTKLATSLIDEYALLGWHAMLTEVNLSPKPGLVDR
                     INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACEGDM
                     FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQSLTPTTVCSTAASFCRGLTDRELRTN
                     NSQLTAGQRLYQQLALTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL
                     LMAINGDTNVASRGGEGACAGYSARRKHYCKKGAFEPPPISIISGSSTGSVSNEISV"
     gene            32400..33863
                     /gene="citT"
                     /locus_tag="JNZ89_001161"
     CDS             32400..33863
                     /gene="citT"
                     /locus_tag="JNZ89_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/succinate antiporter CitT"
                     /protein_id="HAY8935094.1"
                     /translation="MSLAKDNIWKLLAPLVVMGVMFLIPVPNGMPPQAWHYFAVFVAM
                     IVGMILEPIPATAISFIAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSST
                     TVWLVFGAFIFALGYEVSGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNT
                     ARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVL
                     GLEFVSKIAGIQISWLQWFLCFLPVGVILLIIAPWLSYVLYKPEITHSEEVATWAGDE
                     LKTMGALTRREWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLALHVVPWKDITR
                     YNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAH
                     YLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIY
                     GCGYVKSKDYWRLGAIFGVIYISMLLLVGWPILAMWN"
     gene            33974..34780
                     /gene="rna"
                     /locus_tag="JNZ89_001162"
     CDS             33974..34780
                     /gene="rna"
                     /locus_tag="JNZ89_001162"
                     /EC_number="4.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease I"
                     /protein_id="HAY8935095.1"
                     /translation="MKAFWRNAALLAVSLLPFSSANAVALQAKQYGDFDRYVLALSWQ
                     TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG
                     CATRPIPNLPEAHASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF
                     GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKL
                     TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPSNCGKTFVIDKVGY"
BASE COUNT         8659 a         8882 c         8621 g         8659 t
ORIGIN      
        1 tggcgagtca tgcgcgggtt tgcaaccctg attaagtatt tccatgggcg cagaaagcgc
       61 aaaaagaaga tattgttctt ccttattcat ttgttaataa tcccttaagt gcattaactg
      121 actacttttt tatattactt gccgggcttt ccgcacatta acgtcgactg tcacccgaac
      181 agatggagta ttttccctat caaaccggca aagataaaaa tgtagaaaat aattttgatg
      241 acgcccagac agcccggccc accatcgtca acgggcattg gctgcggttg cggctccggt
      301 tcaacagttt gcttctcggt aaaattcgcc gcctgaatta ataatcgacg aataattaat
      361 gcttccagtg gacaacgatc ttctgcatca agacggctta cgatcggcat taatgattct
      421 tctgtcggtt ggctggcctg cactaattgt ttggcaacta aatataatgg ccataagaga
      481 tgttctgtat cacgcgtgag tgagatccgc ggcttacgtc ctttgtgcaa aaccatctcg
      541 accagtgaac gccccagcgc agagagtttt tcatcgctga gtatttcgta taaatgaaaa
      601 cgcgtacggg cgctgtcgcc ggggacataa agtagctgtt taccctgatc gttaaccagt
      661 tcacgagctt caatcatcat caccactaac gggtaataat cgacccgatg ctgacggcac
      721 cattgcaata ttaaagcatc cgcctgggtg gagggatact cgcgccagta gtcacaaagt
      781 tctgccagca agctttcgcc ttctccacaa tagacgcgtt gcgcgtattc ataataacgc
      841 gcatcttcat tatcaggttc agcttcccgc cacgaccggg cgtaatccag aagttcgggg
      901 atatccaggc gacctgcgct ataccagcgg agtaaatttc tgtgcagttt tgcatcatcg
      961 gggatgatca ctgcgcgatg ttgcgctaaa tacaatgtca gccattctgg atgcgatgac
     1021 caaatccgag cgaacatttg gtaaaaatcg atggtgtcat tttgcacggc aacgggcaga
     1081 tgcagaatgg tctggaagtt aaaaacattc cccttcgcaa tggcatataa aaaggattcc
     1141 agttcttctt cgtctatttc cccgacgttt tcctcctgca accaccgcaa tctttctgct
     1201 aataacacca cgcactcgaa ggataaatgg gcagtgttca tggcgattgt gcacagcgac
     1261 cagcgtaatt catcaatctc ttccatcgag caataattta attgctgaat gaatcgctgc
     1321 caggcggagg gcagaaaacg ttcgctatca gaggcaagta acgcgcgaaa ggcgagcaga
     1381 atttcatgtt ctgctacctc atattcttct ggttgccaaa cagatttagc aggcgactgc
     1441 gcaatccgta gcgcctcctc atacgcctga cgaagttgtt taaaaccctg cggttcggtt
     1501 tctggatgaa aggacggtaa cagcgccaga taagcgcggc ggataatatc gacgtcagtc
     1561 gtttcctcta tatcgaggat cttccagcaa tttttcataa gtcgctcata tccttaagcg
     1621 tttccgggca tgtggggtag tcagccagtg gttgccagga caaggtaggg taatacgcat
     1681 catcactggc aaataattga taaaacatat cattgccgga atcgtcgtat tctttacgcg
     1741 ctaagaattc gcgtaataaa ggcagatgat catcttcggg agactgccaa tattgccgac
     1801 caaaggtata accggcaaag tattgccgcc agttactata ataacgtaga gcccgtagat
     1861 gaatacgcga ctggatccat agactttctt cttcactcaa ccagttatta agtacgccca
     1921 ttcgacttaa aaaacccatc cggacataat cccatgcttt aattcctccc tcaccacagc
     1981 attcggctgt gctggcgaca aattgcgcat aagcctgacc ttgctcattt aattcagcaa
     2041 gatagtcacg ccattcacat ggagaataac gaaaccagcg gtgataaaac cctgccaacc
     2101 gagcggcatg accgttctcg atcattcggt gaattgtgcg cagcaggtca tcacggtcat
     2161 caattcccca tgaggaagaa aggtcaaaaa agcatgtacc taaatacatt ttgggggatg
     2221 aatgcgaagg taaacagcat tcattgcgta tttccatcgg agtggaaagt gcaaacaata
     2281 ttttttgcga ccccatgtcc atataattta tccttaaaca ttcatttaat gaatgtaaac
     2341 tacatttcga gactcagtta tttatacttt tctgacgcga cataatacgc ataaaataag
     2401 gcttacgcaa aaatggaaca cataaaatat aatatgtttt atctacaacc ataaggaaat
     2461 gataatgatt tttacgtcaa gttgctgcga taatttatca atagatgaga ttatcgaacg
     2521 tgctgaaaaa ggcgattgcg aggctcaata tattgttggg ttttattata atcgcgatag
     2581 cgcaattgac tctccggacg acgaaaaggc cttttactgg ctgaagctgg ccgccgagca
     2641 aggtcattgt gaagcacaat attccttagg acaaaagtat actgaggata aaagccgtca
     2701 taaagataat gagcatgcca tcttttggct gaaaaaaact gccctacaag gccatacttt
     2761 cgcttccaac gcccttggct ggatactgga tcgtggagaa gaccccaatt ataaagaagc
     2821 ggttgtctgg tatcagatag ccgcggagag cggaatgtct tatgcgcaaa ataatcttgg
     2881 gtggatgtac agaaatggca acggagtcgc aaaagactat gcgctggcat ttttctggta
     2941 caaacaagct gcattacaag gccatagtga cgcgcaaaac aatctggccg atctttatga
     3001 agacggaaaa ggcgttgctc aaaacaagac actcgccgca ttctggtatt tgaaaagcgc
     3061 acagcagggt aatcggcacg cccagtttca aattgcatgg gattataacg ctggcgaagg
     3121 ggtggaccag gactataagc aagcgatgta ctggtatctg aaggctgccg ctcaggaaag
     3181 cgtcggcgct tacgtcaaca tcggttatat gtataaacac ggacaaggcg ttgagaaaga
     3241 ttatcaggct gcctttgaat ggtttacgaa agccgctgaa tgcaatgacg ccactgcctg
     3301 gtataacctg gccattatgt atcactacgg agaaggaaga cctgtcgatc tccgacaggc
     3361 tctcgacctg tatcgtaaag ttcagtcatc cggaaccaga gatgtcagtc aggaaattcg
     3421 tgagactgaa gatttactgt agagataaaa acaagggccg gggaatttca ttcggcccat
     3481 attctcttta ttgctgtgcg aaatcagact attacggctc aaacgggcgt ctctggaact
     3541 ggtcatgacc acatttcggg catagcgtca gcacttccgg tgtgtagatc gggagatgga
     3601 agtgacattt ctcgcagacc agatttccca gcccgaccac ttctccgctg tgataaaccc
     3661 catgatgatt gaggtcctgg aaaacttcgc gccattcaag ctgcgtttta tcggtgatat
     3721 ctgccagctc ctgccataag ctttctttaa tcacccgcat aaagacgctg tcagattctt
     3781 ctttcaggct ctcttcatag ctcatggcga actcttccag gtcacgtctt acagctcgcg
     3841 tcagctcatc gacctcggtt cgcgttaact cccctgtttt tattacgcgc tcgcgcgcct
     3901 gttccaccag tgcgtcgata tcacgttcgc cattgcgcag gcgttcgctc agtgacgcga
     3961 ccagttcacg gtaatattga gcaaccttgt tcatcgtttc atctcccggg tcgttaactg
     4021 actataataa tagacgttct ttgttccttg ctttgctaat acgcccacaa actctgtaaa
     4081 ttaatgtatg aataatccgg gcatcatttc aacgtcgagt gcgcgaaagg ctgttttgac
     4141 gcggacgttt gggctatgct atgcggatct gaaaaaccac ctcaacgcta catttgtagc
     4201 cgtattgaaa acaggaccac tggctgccat gcaagagcaa taccgcccgg aagagataga
     4261 atccaaagta cagcttcatt gggatgagaa gcgcacattt gaagtaaccg aagacgagag
     4321 caaagagaag tattactgcc tgtctatgct tccctatcct tctggtcgac tacacatggg
     4381 ccacgtacgt aactacacca tcggtgacgt gatcgcccgc taccagcgta tgctgggcaa
     4441 aaacgtcctg cagccgatcg gctgggacgc gtttggtctg cctgcggaag gcgcggcggt
     4501 gaaaaacaac accgctccgg caccgtggac gtacgacaac atcgcgtata tgaaaaacca
     4561 gctcaaaatg ctgggctttg gttatgactg gagccgcgag ctggcaacct gtacgccgga
     4621 atactaccgt tgggaacaga aattcttcac cgagctgtat aaaaaaggcc tggtatataa
     4681 gaagacttct gcggtcaact ggtgcccgaa cgaccagacc gtactggcga acgaacaagt
     4741 tatcgacggc tgctgctggc gctgcgatac caaagttgaa cgtaaagaga tcccgcagtg
     4801 gtttatcaaa atcactgctt acgctgacga gctgctcaac gatctggata aactggatca
     4861 ctggccagac accgttaaaa gcatgcagcg taactggatc ggtcgttccg aaggcgtgga
     4921 gatcaccttc aacgttaacg actatgacaa cacgctgacc gtttacacta cccgcccgga
     4981 cacctttatg ggttgtacct acctggcggt agctgcgggt catccgctgg cgcagaaagc
     5041 ggcggaaaat aatcctgaac tggcggcctt tattgacgaa tgccgtaaca ccaaagttgc
     5101 cgaagctgaa atggcgacga tggagaaaaa aggcgtcgat actggcttta aagctgttca
     5161 cccattaacg ggcgaagaaa ttcccgtttg ggcagcaaac ttcgtattga tggagtacgg
     5221 cacgggcgca gttatggcgg ttccgggtca cgaccagcgc gactacgagt ttgcctctaa
     5281 atacggcctg aacatcaaac cagttatcct ggctgctgac ggctctgagc cagatctttc
     5341 tcagcaagcc ctgactgaaa aaggcgtgct gttcaactct ggcgaattca acggtcttga
     5401 ccatgaagcg gccttcaacg ccatcgccga taaactgact gcgatgggcg ttggcgagcg
     5461 taaagtgaac taccgcctgc gcgactgggg tgtttctcgt cagcgttact ggggcgcgcc
     5521 gattccgatg gtgacgctgg aagacggtac cgtaatgccg accccggacg accagctgcc
     5581 ggtgatcctg ccggaagatg tggtgatgga cggcattacc agcccgatta aagcagatcc
     5641 ggagtgggca aaaactaccg ttaacggtat gccagcgctg cgtgaaaccg acactttcga
     5701 cacctttatg gagtcctcct ggtactatgc gcgctacact tgcccagagt acaaagaagg
     5761 tatgctggat tccgaagcag ctaactactg gctgccggtg gatatctaca ttggtggtat
     5821 cgaacacgcc attatgcacc tgctctactt ccgcttcttc cacaaactga tgcgtgatgc
     5881 aggcatggtg aactctgacg aaccagcgaa acagttgctg tgtcagggta tggtgctggc
     5941 agatgccttc tactatgttg gcgaaaacgg cgaacgtaac tgggtttccc cggttgatgc
     6001 tatcgttgaa cgtgacgaga aaggccgtat cgtgaaagcg aaagatgcgg caggccatga
     6061 actggtttat accggcatga gcaaaatgtc caagtcgaag aacaacggta tcgacccaca
     6121 ggtgatggtt gaacgttacg gcgcggacac cgttcgtctg tttatgatgt ttgcttctcc
     6181 ggctgatatg actctagaat ggcaggaatc cggtgtggaa ggggctaacc gctttctgaa
     6241 acgtgtctgg aaactggttt acgagcacac agcaaaaggt gatgttgcgg cactgaacgt
     6301 tgatgcgctg actgaagatc agaaagcgct gcgtcgcgat gtgcataaaa cgatcgctaa
     6361 agtgaccgat gatatcggcc gtcgtcagac cttcaacacc gcaattgcgg cgattatgga
     6421 gctgatgaac aaactggcga aagcaccaac cgatggcgag caggatcgcg ctctgatgca
     6481 ggaagcgctg ctggccgttg tccgtatgct taacccgttc accccgcaca tctgcttcac
     6541 gctgtggcag gaactgaaag gcgaaggcga tatcgacaac gcgccgtggc cggttgctga
     6601 cgaaaaagcg atggtggaag actccacgct ggtcgtggtg caggttaacg gtaaagtccg
     6661 tgccaaaatc accgttccgg tggacgcaac ggaagaacag gttcgcgaac gtgctggcca
     6721 ggaacatctg gtagcaaaat atcttgatgg cgttaccgtg cgtaaagtga tttacgtacc
     6781 aggtaaactc ctcaatctgg tcgttggcta agcgcgggag gaagcgtgcg atatctggca
     6841 acattgttgt tatctctggc ggtgttaatc accgccgggt gtggctggca tctgcgtgat
     6901 accacgcagg ttccttccac tatgaaggtc atgatcctgg actcaggcga tccgaacggg
     6961 ccattaagcc gtgcggtgcg taaccagtta cgtctgaatg gtgtcgagtt gcttgataaa
     7021 gaaaccacgc gtaaggacgt tccatccctg cgtttgggta aagtgagcat cgcgaaagat
     7081 accgcatcgg tattccgtaa cggtcaaaca gcagagtatc agatgatcat gacggtgaat
     7141 gcgaccgtgt tgatccccgg ccgtgatatc tacccgatta gcgccaaagt cttccgttcg
     7201 ttctttgata acccgcaaat ggcgttagcg aaagataacg aacaagacat gatcgtaaaa
     7261 gagatgtacg accgtgctgc cgaacagctg attcgtaagc tgccaagcat ccgtgctgcg
     7321 gatattcgtt ccgacgaaga acagacgtcg accacaacgg atactccggc aacgcctgca
     7381 cgcgtctcca ccacgctggg taactgatga ttcggttgta cccggaacaa ctccgcgcgc
     7441 agctcaatga agggctgcgc gcggcgtatc ttttacttgg taacgatcct ctgttattgc
     7501 aggaaagcca ggacgctgtt cgtcaggtag ctgcggcaca aggattcgaa gaacaccaca
     7561 ctttttccat tgatcccaac actgactgga atgcgatctt ttcgttatgc caggctatga
     7621 gtctgtttgc cagtcgacaa acgctattgc tgttgttacc agaaaacgga ccgaatgcgg
     7681 cgatcaatga acaacttctc acactcaccg gacttctgca tgacgacctg ctgttgatcg
     7741 tccgcggtaa taaattaagc aaagcgcaag aaaatgccgc ctggtttact gcgcttgcga
     7801 atcgcagcgt gcaggtgacc tgtcagacac cggagcaggc tcagcttccc cgctgggttg
     7861 ctgcgcgcgc aaaacagctc aacttagaac tggatgacgc ggcaaatcag gtgctctgct
     7921 actgttatga aggtaacctg ctggcgctgg ctcaggcact ggagcgttta tcgctgctct
     7981 ggccagacgg caaattgaca ttaccgcgcg ttgaacaggc ggtgaatgat gccgcgcatt
     8041 tcaccccttt tcattgggtt gatgctttgt tgatgggaaa aagtaagcgc acattgcata
     8101 ttcttcagca actgcgtctg gaaggcagcg aaccggttat tttgttgcgc acattacaac
     8161 gtgaactgtt gttactggtt aacctgaaac gccagtctgc ccatacgcca ctgcgtgcgt
     8221 tgtttgataa gcatcgggta tggcagaacc gccggggcat gatgggcgag gcgttaaatc
     8281 gcttaagtca gacgcagtta cgtcaggccg tgcaactcct gacacgaacg gaactcaccc
     8341 tcaaacaaga ttacggtcag tcagtgtggg cagagctgga agggttatct cttctgttgt
     8401 gccataaacc cctggcggac gtatttatcg acggttgata tgaaatcttt acaggctctg
     8461 tttggcggca cctttgatcc ggtgcactat ggtcatctaa aacccgtgga aacgctggcg
     8521 aatttgattg gtctgacgcg ggtcacaatc atccctaata atgttcctcc gcatcgtccc
     8581 cagccggaag cgaacagcgt gcagcgtaaa cacatgcttg aactggcgat tgccgacaag
     8641 ccattattta ctcttgatga acgcgagcta aagcgcaatg ccccctctta cactgcgcaa
     8701 acactgaaag agtggcggca ggaacaagga ccggacgtgc cgctggcgtt tattattggt
     8761 caggattcac tgctgacctt tccgacctgg tacgaatacg aaacgatact cgacaatgca
     8821 catttgatcg tctgtcggcg tccaggttac ccacttgaaa tggcgcaacc gcaataccag
     8881 caatggctgg aagatcattt gacacataac caggaagatc ttcaccttca gcctgccggt
     8941 aaaatttatc tggctgaaac gccgtggttt aacatctcgg cgaccatcat ccgcgaacgt
     9001 ttgcaaaacg gtgaatcgtg tgaggattta ttgccggaac cggtactgac ttacattaac
     9061 caacaaggct tgtatcgctg atacctgtcg ttacggaggg catgatgcga ctgtggttaa
     9121 ttcgtcatgg tgaaacgcaa gcgaatatcg atggtcttta cagcggtcat gcgccccccc
     9181 tgaccgcgcg cggtattgag caagcgcaaa atctgcatac gctgctacat ggtgtttcct
     9241 ttgatctggt tttatgcagt gaactggaac gggcacagca taccgcgcga ctggttctca
     9301 gtgaccgcca gctccccgtg caaatcatcc ctgaactcaa cgaaatgttt tttggcgact
     9361 gggagatgcg acatcatcgc gacctcatgc aagaagatgc cgaaaactat agcgcgtggt
     9421 gcaatgactg gcagcatgca atccccacga acggtgaagg atttcaggca ttttcgcaac
     9481 gtgtggaacg ctttatcgca aggcttagtg aatttcagca ctatcagaat attttagtcg
     9541 tcagccatca gggtgtactg agtctgttaa tcgcccgttt aattggcatg cctgccgagg
     9601 ctatgtggca ttttcgcgtt gaccaggggt gttggagcgc cattgatatc aaccaaaaat
     9661 tcgcgacgct acgcgtcctc aatagccgtg ccatcggggt cgataatgca tgacttttct
     9721 gtttttttac gggtaagccg caacgaccat tgacagaccc gggcaggctg atattctccg
     9781 cagccagact tttttcgcca gacacgactt tgtagaaatt gttttacaaa aatggcgatg
     9841 caatctgcgg cgcggggtgg gatgatagcc cactttcgaa agccgattcg gcgacaattg
     9901 tcccgaaatc gcctctggtt caggtatact gacagaccat ttttatctat ttgattcacc
     9961 cagggggaaa acttgcaggg taaagcactc caggattttg ttatcgacaa aattgatgac
    10021 ctcaaaggtc aggacatcat cgccttagac gttcaaggca aatccagcat caccgactgc
    10081 atgatcatct gtacgggtac gtccagccgt catgttatgt ccattgctga ccacgttgtg
    10141 caggagtctc gcgcagcggg cctgttaccg ctcggcgtag aaggtgaaaa cagcgccgac
    10201 tggattgtcg tggatttggg cgatgtgatt gtccatgtca tgcaggaaga gagccgtcgc
    10261 ctgtatgaac tggaaaaact ctggagttaa tgcgtgaagc tgcaacttgt cgccgtggga
    10321 acgaaaatgc cggactgggt acaaaccggt tttaccgagt acctgcgtcg ttttccgaaa
    10381 gatatgccct tcgagctgat tgaaattccg gccggaaaac gcggcaagaa tgcggacatc
    10441 aagcgcatac tcgacaaaga gggtgagcag atgttggcgg ccgcaggcaa aaaccgcatt
    10501 gtcaccctcg atattccagg caagccctgg gatacgccgc agttagccgc tgagctggaa
    10561 cgctggaagc tggatggtcg cgacgtcagt ctactgattg gcgggcctga agggttgtcg
    10621 cctgcctgta aagcggcggc ggagcagagc tggtcgctgt cggcgcttac cctcccccat
    10681 ccgctggttc gcgtgctggt cgcagagagt ctgtaccggg cgtggagcat caccaccaac
    10741 catccttatc accgtgagtg ataagggagc tttgagtaga aaacgcagcg gatgaaacta
    10801 cagaactctt ttcgcgacta tacggcagag tccgcgctgt ttgtgcgccg ggcgctggtc
    10861 gcctttttgg ggattttgct gctgaccggc gtgcttatcg ccaacctgta taatctgcaa
    10921 attgttcgct ttaccgacta ccagacccgc tctaatgaaa accgcattaa gctggtgcct
    10981 atcgcgccca gccgcggcat tatttacgac cgtaatggta tccctctggc cctcaaccgc
    11041 actatctacc agatagaaat gatgccagag aaagtcgata acgtgcagca aacgctggac
    11101 gctttgcgca gcgtggttga tctgaccgat gacgatattg ctgcattccg aaaagagcgc
    11161 gcacgttcac accgtttcac ctctattccc gtgaaaacta acctgaccga agtacaagta
    11221 gctcgctttg ccgtcaatca gtaccgtttt ccgggggttg aagttaaagg ctataaacgt
    11281 cgttactatc cttacggttc ggcgttgacc cacgtcatcg gctatgtgtc gaaaatcaac
    11341 gataaagacg tcgaacgcct gaataatgac ggcaaactgg ccaactatgc ggcaacgcat
    11401 gatatcggta agctgggcat tgagcgttac tatgaagacg tgctgcacgg tcagaccggt
    11461 tatgaagagg ttgaagttaa caaccgtggg cgtgttatcc gccagttaaa agaagtacca
    11521 ccgcaagccg gacacgatat ttacctgacg ctggatctca aactccagca atatattgaa
    11581 acgctgctgg cgggtagccg cgcagctgtg gtagtcaccg atccgcgtac aggtggggtg
    11641 ctggcgctgg tttccacgcc tagttatgac ccaaacttgt ttgttgacgg tatctccagc
    11701 aaagattatt ccgccttgtt gaacgacccg aatacaccgc tggtgaaccg cgccacacag
    11761 ggggtttatc ctcccgcgtc tacagttaaa ccctatgtgg cggtttcggc attgagcgcc
    11821 ggggtgatca cgcgcaatac gacgctgttt gacccaggct ggtggcaact gccaggttcg
    11881 gaaaaacgtt atcgtgactg gaaaaaatgg ggccacgggc gtctgaatgt cacaagatcg
    11941 ctggaagaat ctgcggatac cttcttctat caggtggcct acgatatggg gatcgatcgc
    12001 ctctccgaat ggatgggtaa attcggttat ggtcattaca ccggtatcga cctggcggaa
    12061 gaacgttccg gcaacatgcc tacccgcgaa tggaaacaga aacgctttaa aaaaccgtgg
    12121 tatcagggtg acaccattcc ggttggtatc ggtcagggtt actggacagc gaccccaatc
    12181 cagatgagta aggcactgat gatcctgatt aatgacggta tcgtgaaggt tccgcatttg
    12241 ctgatgagca ccgccgaaga cggcaaacag gtgccatggg tacaaccgca tgaaccgccc
    12301 gtcggcgata ttcattccgg ttactgggag ctggcgaaag acggtatgta cggtgttgct
    12361 aaccgcccta acggtacgac gcataaatac tttgccagcg caccgtacaa aattgcggcg
    12421 aaatctggta ccgctcaggt cttcggtctg aaagcgaacg aaacctataa tgcgcacaaa
    12481 attgccgagc gtttacgtga ccacaaactg atgaccgcct ttgcgccata caacaatccg
    12541 caagtggctg tcgccatgat tctggagaac ggcggcgcgg gtccggcggt tggtacgctg
    12601 atgcgtcaga tcctcgacca cattatgctg ggtgataaca acaccgatct gcctgcggaa
    12661 aatccagcgg ttgccgcagc ggaggaccat taatcatgac ggataatccg aataaaaaaa
    12721 cattctggga taaagtccat ctcgatccca caatgctgct gatcttactg gcattgctgg
    12781 tttacagcgc cctagttatc tggagcgcca gcggtcagga tattggcatg atggagcgta
    12841 aaatcggcca aatcgcgatg ggtctggtca tcatggtggt gatggcgcaa attcctccac
    12901 gcgtttatga aggctgggcc ccctatctct atatcatctg tattattttg ctggtggcgg
    12961 tagatgcttt cggtgccatc tctaaaggtg ctcaacgctg gctggacctc ggtattgttc
    13021 gttttcagcc gtcggaaatt gccaaaatag ccgtaccact gatggttgcg cgctttatca
    13081 accgcgacgt ttgcccaccg tcgttgaaga acacaggcat cgcgctggtg ctgatattta
    13141 tgcccacgct gctggtggct gcacagcctg acctgggaac atcaatcctc gttgcgcttt
    13201 ccggtctgtt tgtactgttc ctctctggcc ttagctggcg tctgattggc gtcgcagtag
    13261 tgctggtggc ggcgttcatt cctattctgt ggttcttcct gatgcatgat taccagcgcc
    13321 agcgcgtaat gatgctccta gacccggaat cagacccact cggcgcgggc tatcacatta
    13381 ttcagtctaa aattgctatt ggctccggcg gattacgcgg caaaggctgg ctgcatggca
    13441 ctcagtcaca acttgaattt ctacccgaac gccataccga ctttatcttc gcggtactgg
    13501 cggaagagct gggattagtg ggcattttga ttctgctcgc tctctacatt ctgctgatca
    13561 tgcgcgggct gtggatagcc gccagagcgc aaaccacctt tggtcgcgtc atggctggcg
    13621 gcttaatgct gatattattc gtttatgtct tcgtaaatat tggtatggta agcggtattc
    13681 tgccggttgt aggggttccg ctcccactgg tcagttatgg aggatcagcg ctaattgtgc
    13741 tgatggctgg gttcgggatt gtaatgtcaa tccacaccca caggaaaatg ttgtcgaaaa
    13801 gcgtgtaaga ggtgcgcaat gcgtaagcag tggctcggga tctgcatcgc ggcaggaatg
    13861 ctcgcggcat gtacaagcga tgatggtcag caacagacgg taagtgtacc gcagcctgcg
    13921 gtatgtaacg gccccatagt tgaaattagc ggggcggacc cgcgtttcga accactgaac
    13981 gcgacggcaa atcaggatta ccagcgcgac ggtaaaagct acaaaatcgt gcaggatccg
    14041 tctcgattta gccaggcggg actggcggca atctatgatg ccgaaccagg cagtaacctg
    14101 acggcctctg gcgaagcttt cgatccgaca cagctgacgg cggcccatcc aacgcttccg
    14161 atccccagct acgccagaat cactaacctg gctaacgggc gaatgatcgt ggtgcgcatt
    14221 aatgatcgcg gcccttacgg caacgaccgc gttatttcgc tttctcgcgc ggcagctgac
    14281 cgtcttaaca cgtcaaacaa caccaaagtt cgtatcgatc cgattattgt cgcccaggat
    14341 ggttcgcttt ctggtcctgg tatggcttgt accacagtcg ccaaacagac ttacgccctg
    14401 cctgcacctc ccgatttaag cggtggcgcg ggaacaagtt cagtgtctgg cccgcagggt
    14461 gacattcttc cggtcagtaa ttcgacgcta aaaagcgaag atccgaccgg cgcgccggta
    14521 accagtagcg gtttcctcgg cgcaccaacg accttagcgc ctggtgtact ggaaggcagc
    14581 gaaccgacgc ctgcgccaca gcccgttgtt acagctccgt cgacaacgcc tgcaacctcg
    14641 cctgcaatgg tgacaccgca agccgcctcg caaagcgcca gcggcaactt tatggtgcaa
    14701 gtcggggccg ttagcgatca ggctcgtgcg caacagtacc aacagcaact gggacagaag
    14761 ttcggcgtcc ccggtcgcgt aactcaaaat ggcgcggtct ggcggatcca gcttggcccc
    14821 ttcgccagca aagccgaagc cagtaccttg cagcaacgtt tgcaaaccga agcccaatta
    14881 cagtcattta ttaccaccgc gcagtagcgt aaagcaggca tctgatgtgt caatttctgt
    14941 aaatgacgtt aacaaagtca cgcggaaagt cagatgcctg ccggtagtgc atttgctata
    15001 gtagggcact ttttttaatt ccatcacgga tgtcgtagtt cagaccatga ataccatttt
    15061 ttccgctcgt atcatgaagc gcctggcgct caccacggct ctttgcacag cctttatctc
    15121 tgctgcacat gccgatgacc tgaatatcaa aactatgatc ccgggtgtac cgcagatcga
    15181 tgcggagtcc tacatcctga ttgactataa ctccggcaaa gtgctcgccg aacagaacgc
    15241 agatgtccgc cgcgatcctg ccagcctgac caaaatgatg accagttacg ttatcggcca
    15301 agcaatgaaa gccggtaaat ttaaagaaac tgatttagtc actatcggca acgacgcatg
    15361 ggccaccggt aacccggtgt ttaaaggttc ttcgctgatg ttcctcaaac cgggcatgca
    15421 ggttccggtt tctcagctga tccgcggtat taacctgcaa tcgggtaacg atgcttgtgt
    15481 cgccatggct gattttgccg ctggtagcca ggacgctttt gttggcttga tgaacagcta
    15541 cgttaacgcc ctgggcctga aaaacaccca cttccagacg gtacatggtc tggatgctga
    15601 tggtcagtac agctccgcgc gcgatatggc gctgatcggc caggcgttga tccgtgacgt
    15661 accgaatgaa tactcgatct ataaagaaaa agaatttacg tttaacggta ttcgccagct
    15721 gaaccgtaac ggcctgttat gggataacag cctgaatgtc gacggcatca aaaccggaca
    15781 cactgacaaa gcaggttaca accttgttgc ttctgcgact gaaggccaga tgcgcttgat
    15841 ctctgcggtg atgggcggac gtacttttaa aggccgtgaa gccgaaagta aaaaactgct
    15901 gacctggggc ttccgtttct tcgaaaccgt taacccactg aaagtaggta aagagttcgc
    15961 ctctgaaccg gtttggtttg gtgattctga tcgcgcttcg ttaggggttg ataaagacat
    16021 gtacctgacc attccgcgtg gtcgcatgaa agatctgaaa gccagctatg tgctgaacag
    16081 cagtgaattg catgcgccgc tgcaaaagaa tcaggtcgtc ggaactatca acttccagct
    16141 tgatggcaaa acgatcgagc aacgcccgct ggttgtgttg caagaaatcc cggaaggtaa
    16201 cttcttcggc aaaatcattg attacattaa attaatgttc catcactggt ttggttaaaa
    16261 attaaacact tgaaagtgta atttccgtcc ccatatacta agcatcagta aaaaaactcc
    16321 cgccttctgg cgggagttgc tatttaatta cgttacgccg gagctgacat gaaaaccaaa
    16381 cttaacgaac tgcttgaatt ccctactcct tttacttaca aagttatggg gcaggcgtta
    16441 cctgagctgg ttgatcaggt ggttgaagtg gtacagcgcc atgcgccagg tgactacacc
    16501 ccaacggtaa aaccaagcag caaaggcaac taccactcgg tatctatcac tatcaacgcc
    16561 actcatatcg agcaggttga aatactgtat gaagaactgg gcaaaatcga tattgtccgc
    16621 atggttctgt aactcgcttc tccgttaccc ggctcctggt cgggtaactc ccctctcctc
    16681 gctgtgatat acttttcccc cacttttact cattctccac ggagatgccg ttttgtatca
    16741 ggataaaatt cttgtccgcc agctcggtct tcagccttac gagccaatct cccaggctat
    16801 gcatgaattc accgataccc gcgatgatag tacccttgat gaaatctggc tggtcgagca
    16861 ctatccggta ttcacccaag gtcaggcagg aaaagcggag cacattttaa tgccgggtga
    16921 tattccggtg atccagagcg atcgcggtgg gcaggtgact tatcacgggc cgggacaaca
    16981 ggtgatgtat gtgttgctta acctgaaacg ccgtaaactc ggtgtgcgtg aactggtgac
    17041 cttgcttgag caaacagtgg tgaataccct ggctgaactg ggtatagaag cgcatcctcg
    17101 ggctgacgcg cctggtgtct atgtcgggga aaagaaaatt tgctcactgg gtttacgaat
    17161 tcgacgcggt tgttcattcc acggtctggc attaaacgtc aatatggatc tttcaccatt
    17221 tttacgtatt aatccttgtg ggtatgccgg aatggaaatg gctaaaatat cacaatggaa
    17281 acccgaagcg acgactaata atattgctcc acgtttactg gaaaatattt tagcgctact
    17341 aaacaatccg gacttcgaat atattaccgc ttaattccat acatcaatgg cccaatttac
    17401 actgggtcat tactcataat acctgctaat gctttacatc tccttcgcgt ttgtatattt
    17461 tctttatcac ttgcagaaat gaggtgccac gccttgctcc gtaactcacc ccattgatta
    17521 acctattgaa atagttgatt atggtgagca aaagcgttcc gttccaatta gacataagat
    17581 tattgtaatt ttttaaatat tatttttcca tgaataaaat tggagtaagt gcgtggatag
    17641 taataatcaa attgaaccct gtttaagcag aaagtcgtca gaaggtaaac cacaaatatt
    17701 tacaacctta cgaaatattg ctcttaacct tctgactatt tttgaagctg tatatgtaca
    17761 taaagggatc gttaatgcag cgaaagtgct taatctgccc ccctcggcaa tcagtcagtc
    17821 tattcagaaa ctgcgcgtta tattccctga cccattgttt attcgcaaag gccaaggtgt
    17881 cactcctacc gcatttgcga tgcatctaca tgagtatatc agtcagggcc ttgagtccat
    17941 tcttggcgcg ctggatatcg aaggaagcta tgataagcaa cgaacgataa ctattgcgac
    18001 cactccctcg gtcggagccc tggtccttcc tgtcatctat cgggcgatta aaactcacta
    18061 tccgcagctt ttactgcgca acccgcccat cagcgacgcg gaaaaccaac tcagtcagtt
    18121 tcaaaccgat ctcatcatcg ataacatgtt ttgcaccaat cgtacggtgc aacatcatgt
    18181 tctgttcacc gacaatatgg tgttaatttg ccgcgaggga aatccactac tctctttaga
    18241 agatgacaga gagactatcg acaacgctgc gcatgtactt ctgttaccgg aagagcaaaa
    18301 tttcagcggt ctgcggcaga gagttcaaga aatgtttccg gaccggcaaa tcaatttcac
    18361 cagctacaac attttgacaa tcgctgcact ggttgccaac agtgacatgt tagcgattat
    18421 tcccagccgt ttttataacc tgtttagccg ctgctggccg ctggaaaaac tgccttttcc
    18481 gtccttaaat aaggagcaaa tagatttctc tatccactac aacaaattca gcctgcgtga
    18541 tcccatcctg cacggagtaa tagatgttat ccgtaatgca ttttgaaaaa gtattgttac
    18601 agccagatca cagcgcagaa cgataaaatg gcacaatcca acaacaattt tacattttcg
    18661 cgaccgcttt ggctgctttc aggtccgttt caatgatata ctgccagtcg ttaattcaaa
    18721 aatagttgat aattacaaca atctattgaa ttgaaacgct ttccttcgta attcgcaact
    18781 ggaacacgca cgctatgagt aaacccattg tgatggaacg cggtgttaaa taccgcgatg
    18841 ccgataagat ggcccttatc ccggttaaaa acgtggcaat agagcgcgaa gccctgctgc
    18901 gcaagccgga atggatgaaa atcaagcttc cagcggactc tacacgtatc cagggcatca
    18961 aagccgcaat gcgcaaaaat ggcctgcatt ctgtctgcga ggaagcctcc tgccctaacc
    19021 tggcggaatg cttcaaccac ggcacagcaa cgtttatgat cctcggcgct atttgtaccc
    19081 gccgttgtcc gttctgtgat gttgcccacg gtcgcccggt agctcctgat gccaatgaac
    19141 cagtgaaact ggcgcagacc attgccgata tggcgctgcg ttatgtggtt atcacctccg
    19201 ttgaccgtga tgacctgcgc gatggcggtg cccagcactt tgcggattgc attactgcca
    19261 ttcgggaaaa aagcccgcaa atcaaaattg aaactctggt gccggatttc cgtggtcgta
    19321 tggatcgtgc tctggatatt ctgactgcaa cgccaccaga tgtgttcaac cataacctgg
    19381 aaaacgtacc gcgtatttac cgtcaggtac ggcctggtgc agattacaac tggtcgctga
    19441 agctgctgga acgctttaaa gaagcgcatc cggaaatccc gaccaagtct ggtctaatgg
    19501 tgggactggg tgaaaccaat gaagaaatta ttgaggtaat gcgcgacctg cgccgtcatg
    19561 gtgtgacgat gttaacgctg gggcaatatt tgcagccaag ccgccatcac ctgccggttc
    19621 aacgttacgt tagcccggat gagttcgacg aaatgaaagc cgaagcgctg gcgatgggct
    19681 ttacccatgc tgcatgcggt ccgtttgtcc gttcttctta ccacgccgat ttgcaggcga
    19741 aagggatgga agttaagtaa tcctgtaata attacttaca tctgtctgat aaaaaacccg
    19801 ctttttgaag cggttttttt gtatcgaaca agatattgag ggagcgtcct gctcgccacg
    19861 tcactcttta tgagagagct tttcagcctg aagatcaacg tctgcgcctt ttttcgccgc
    19921 agcatcatca tcattcatcg ccttcttgaa ccctttaatg gccgctccaa ggtctccgcc
    19981 cagcgtacgt aacttcttag tcccaaacag cagaacgacc agcgccgcaa ctactagcag
    20041 tttggtaata ctaatctcac ccatagatac cttcttgaca tataaccggc aacagaacgc
    20101 gccttaaaaa ccagagaata ttaacggtca ttcgacgcgc gcacacaata gcaatctgta
    20161 acaaggtgaa tcaagcgccg agtaaaaaaa catcataata attgcggcgg cgcaaagcga
    20221 cggttgttta agacgggcag ttgcgcgcgc acctgacgca cacgttcggg cgtcacttcc
    20281 gccataatga gtgcaggcat ttctgacgct gccgcaatgg tgacgccaaa gggatctata
    20341 atccggcttt gcccgatatt tttgttcccg cactcgcccg ccgccaccat ataacaggtg
    20401 gtatccagcg cacgagcggc aagcaacgtt gaccagtgat gctctttgag cggcccgcga
    20461 acccaggcgg caggaagtac caggatttca gctccctgta atgcctgtgc cagcgccagc
    20521 tctggaaagc gtaagtcata acaggtcatc agaccgacct tcatcccttc cacctccagt
    20581 aacggagcga tttcattacc agcatcaaca cggcgtgatt cctgaatggc aaatgcatca
    20641 tagagatgca gtttggcata acgggcgacg atgtttcctg cctgaagtgc caccagcata
    20701 ttccatgcgc gccccggcgt tgaaggaaca tgaatcgtca gaattgtcgt catcatgtta
    20761 cgtttacttt ctcgccgtaa acgtccgagg aattcgcctt ccagcagctg tgctgattta
    20821 accgatagat ctgcatcatg atcatcgcgt gccagcaatg cttccggcag gacaaacagc
    20881 gatacgtcgt tttccgccgc ctgcgccatc aacgaggcac aaatctcagc gttcttttcc
    20941 cacacagatg taacagcaaa ctgtcctgca gcaaccagca ttgccacctc ctgtcagagt
    21001 cgtaaaattc gccaacgacg attattcggc gttacactta tcactcatac aaatcaaata
    21061 gcaggatttt gcagtgttac aacttctttt agcagttttt attggcggtg gtacgggaag
    21121 cgtggcgaga tggctgttaa gtatgcgatt taacccactg catcaggcga ttccgttggg
    21181 gacgctgaca gcaaacctga ttggggcatt catcatagga atgggattcg catggttcag
    21241 caggatgacg aacattgatc cagtgtggaa agtattaatc accaccggat tttgtggcgg
    21301 tctaacaacc ttctcaacat tttcggcaga agtggtgttt ttgttacaag agggtcgctt
    21361 tggctgggca ttactgaacg ttttcgtcaa ccttctgggg tcttttgcca tgacagcact
    21421 ggctttctgg ctgttttcgg cctcaaccgc acactaaaga cccaaaaaaa acccgctgat
    21481 taagcgggtt ttgaattctt gctgacgtat cttacagagc gattacgttt gcagcagaag
    21541 ggcctttggc accgttagtg atttcgaact ctacgcgctg accttcagca agagttttaa
    21601 aaccattagt ctggattgca gagaagtgta cgaacacgtc tttgctgccg tcttccggag
    21661 taatgaaacc gaatcctttg gactcattaa accacttaac gttaccttta atcttagaca
    21721 tcaaaattac ctttacatga aaaatagaca caaatgctgc gtcggttacc agtacaccaa
    21781 ttgtggtacg ctttgtccag tgcaacttta ctaaaaagtg ataaaagtcg cgttattttt
    21841 gatgttactt attttagcta ttgattttaa agaagttact aaaacttcat ttgtctcaaa
    21901 actgaaagcg catccaggca aagtacacat tgccattgtt gtaggtaccc ggaatgtagg
    21961 tcatctgaaa agtcactggg ccataaccca cggaggccaa tggcagtaga accgggagag
    22021 ggatgtaatt ccagttatcg cgtgccgtta cgccagcggt gaatcccaga cctaaatgaa
    22081 aattttcatc cgccagcggt cgccaggtac tttcccatcc gtatccggca atcggttccc
    22141 atttgttcca cgagtcctta aatgccatgg catacaggcc atgccagttt cctttttcat
    22201 cccaacgcga caggccaaaa ccgccacccc acggtcgctc gttatagcga tcggtttttt
    22261 ctttgtcgta agcgaaacgt gcatgccagg tgatggcagg aatatataaa tcataatgtt
    22321 caggctgttg ccaggttggt gcaatatttt ctctaaacgt tgtcatccac tcatctgcgt
    22381 tagcaaaaac tttaccaacg ctgattaact gaataaaaac aaaggaaaag atagcgacat
    22441 atttactcac gttcatttgt gaccataaaa catttatcaa aaatctacta ctagcatagc
    22501 aaagctacaa ttaacataac cttaatagac ccaacataaa gaataatctg aatagctgct
    22561 ctatttattt ccgcttgttc aagttaaata tttccgcgca tcgattaaag atgatgcgtc
    22621 gttttctgcg atgggaatag tcaaaaaaga aaaaccaagt cttttttgat gacaaaatgc
    22681 aatcaaggaa aaattatttt attttttaac gagatacaac aatcacctta acaaagtata
    22741 taatatatat cgtcaaccta tgctcatatt agattatttt ttgagcgcac agccgcagct
    22801 aacaccattg caattaacaa atttgcatca atccaccatc aatttgcaca cattattatg
    22861 tgataattgc caaccgctaa atatgcgttt tgttatctat gtataaaaac agtaacttca
    22921 atgtcttaat ggcagttttt cttgatttta atcagcattc atcgccaatt tattgggcat
    22981 attttttcct taagctttag gaatttttta ttatttactt tggggcctgg agacaggaaa
    23041 aattatgctg acattcattg aactccttat tggggttgtg gttattgtgg gtgtagctcg
    23101 ctacatcatt aaagggtatt ccgccactgg tgtgttattt gtcggtggcc tgttattgct
    23161 gattatcagt gccattatgg ggcacaaagt gttaccgtcc agccaggctt caacaggcta
    23221 cagcgccacg gatatcgttg aatacgttaa aatattacta atgagccgcg gcggcgacct
    23281 cggcatgatg attatgatgc tgtgtggatt tgccgcttac atgacccata tcggcgcgaa
    23341 tgatatggtg gtcaagctgg cgtcaaaacc attgcagtat attaactccc cttacctgct
    23401 gatgattgcc gcctattttg tcgcctgtct gatgtctctg gccgtctctt ccgcaaccgg
    23461 tctgggtgtt ttgctgatgg caaccctatt tccggtgatg gtaaacgttg gtatcagtcg
    23521 tggcgcagct gctgccattt gtgcctcccc ggcggcgatt attctcgcac cgacttcagg
    23581 ggatgtggtg ctggcggcgc aagcttccga aatgtcgctg attgacttcg ccttcaaaac
    23641 gacgctgcct atctcaattg ctgcaattat cggcatggcg atcgcccact tcttctggca
    23701 acgttatctg gataaaaaag agcacatctc tcatgaaatg ttagatgtca gtgaaatcac
    23761 caccactgct cctgcgtttt atgccatttt gccgttcacg ccgatcatcg gtgtactgat
    23821 ttttgacggt aaatggggtc cgcaattaca catcatcact attctggtga tttgtatgct
    23881 gattgcctcc attctggagt tcctccgcag ctttaatacc cagaaagttt tctctggtct
    23941 ggaagtggct tatcgcggga tggcagatgc gtttgctaac gtggtgatgc tgctggttgc
    24001 cgctggggta ttcgctcagg ggcttagcac catcggcttt attcaaagtc tgatttctat
    24061 cgctacctcg tttggttcgg cgagtatcat cctgatgctg gtattggtga ttctgacaat
    24121 gctggcggca gtcacgaccg gttcaggcaa tgcgccgttt tatgcgtttg ttgagatgat
    24181 cccgaaactg gcgcactctt ccggcattaa cccggcgtat ttgactatcc cgatgctgca
    24241 ggcgtcaaac cttggccgta ccctttcgcc cgtttctggc gtagtcgttg cggttgccgg
    24301 gatggcgaag atctcgccgt ttgaagtcgt aaaacgcacc tcggtaccgg tgcttgttgg
    24361 tttggtgatt gttatcgttg ctacagagct gatggtgcca ggaacagcag cagcggtcac
    24421 aggcaagtaa atagtaatgc cggaggcaag tttcctccgg ctttatcatg tcacccactg
    24481 tggtatatgc gttgtggtct gccaactttg ccgtgaacaa tttcagcaat aatcagatgg
    24541 cggctggcgc aatattcaag ataacgtctg gcagacgtgc ggctgatggt cagtgcctgc
    24601 gccaccgttt ctgccgtatg ttgcacacca ggctctttaa acagttttcg caccgcgttt
    24661 agcgtcaagg gatcaatgcc ggtcggcagt tcgtctttag gttcaccgcg agcataggca
    24721 ttaaacatct catcaatttg cttctggctg gcgctatcaa tactttccag catatgttta
    24781 cgctggcgga aacgggttag cgtttgcccc agccgttcat aggcaatggg cttaatgaga
    24841 taatcaaata caccacaacg tacggcttca gacaccgttt ccatatcgct ggctgcagtg
    24901 gtaaacacca cgtcgccggg ataatgcgcc tgcaccagtt catgcaataa attaatccct
    24961 ctgccgtcag gaagatagtt atcgagcaag attagccccg gcttaaaacg ctcgatcatc
    25021 attcgggcct gcgccaggtt tcccgccagt aatatctgac tgaatccggg aatgtgacga
    25081 atatattccg catgcatctc tgccagcggc gtttcgtcct caacgatcaa tagggttaat
    25141 ggagctgtca ttaggtttca ctttcggaat atagattgaa aataaggtac cgcagggatc
    25201 attatcttcg agagtgataa caccaccgca gcgcgttacg tagctggcaa tcaagtacaa
    25261 cccaatgcca tgttcaccgg gctcgtcagc acgcgtactg accccctgct caaatatttt
    25321 gtctcgtaga gactctggaa cgccgcagcc ctgatcggcg acttcaatca ccacatcatc
    25381 gccttcatcg ctgaggaata attcaacgat cttgtttcct tcatcgctac gcaggctggc
    25441 ttcgaaggcg ttatcaagta aattgcccac aatggctgca aactcggtgc tatccagtcc
    25501 tggcggcagt tgcgaaagct ggctaccggg gacaatgatc atttttagcc ccagttcccg
    25561 ggcgcgctgc actttaccaa aaagcagccc cgccacctag cgatcggcaa acgcctcgcg
    25621 caggctgtca ataagctgtt gctgggcctg agactccccc tgcaccatcg ccagcacgcg
    25681 atcatactct ttcatctgca acagaccatt gagcgtcgac atccaattga gatgctcgtg
    25741 tcgcaatgta cgaaggctct caacgtattg ttttatttgc gtcagttgcg cattgagggt
    25801 ggaaatttcg tctttactgc gaaagctgat aatggccccc agcaaatcat cacctgaacg
    25861 aatagcttcc cgattggcaa taacgctcag accgttaaag ttagccacca tatcctgacg
    25921 tttttcatca atctgttcgg taaagaaatc ggcgggcctg accacttcag caatgggttt
    25981 acccaaccat tgccgtccgg gggaactcag ccccagcatc tttcttgcgt tacgattgat
    26041 ggcggtaatg taaccgtgcg gatccaccgc aatcagccct tcataaaccg aactaaacag
    26101 cgcctcttgc tgacggacca cgcgtgcgat ttgctttggc tccatgccca tcatctgccg
    26161 acggatatgc gcggccagga accacgacag caacatcaga atccctaaca gcacgacaaa
    26221 cacacctgcc atcggtaata aaaactcagc ccgccagcta tcgattttac tcaccaggta
    26281 gccaatcgac accacgccga tgacttttcc atcgtcatca aagattggcg ttttggcgcg
    26341 catcgccatc cccattgacc ctttcccggt aatgaagtag ctctcccctt tctccagcgc
    26401 gccctgtttg gtgaactgca taggataacc aattttctcc ggattaggat ggtaaaggcg
    26461 gatcgagtgc cggtcgccat caccacataa tcaaaatcgg tatctctttg taatttgtta
    26521 gcgatggtcg ccagccgttt gtagtcacgc gttttcaccg cagagatgac actgtcattg
    26581 gaggcaataa ttttcgcctg attcattgcc atgtcgcgta catgaagcgt taaatagtcc
    26641 tcaaaactgg ccgtaaaata ttgcgccaag gctgcaatga caaatattga gaacaccaga
    26701 atcagcaaaa agatacgcag cggaaatgcc agtctttgga aaaatgcaaa ctgtttattc
    26761 tcgttaagct gcaacattgt tttccttgcg ggttatcccg agcctctttg acagatgtaa
    26821 ttaaaatgtt gaatcaaaat acatagatat taattatgat cgtggcaaat tttattcatt
    26881 aaatcaatta aatcacttaa acctgcaggt catttcgtaa ttacattaat taaaaaactt
    26941 aaaccattaa ataaataaaa atttcacgcc gaaatactcc ttaggatgta tagcgaaagg
    27001 agaaaaagat atacctcgat cacccccctt tctcccaagt gaaaataaaa ggttatcagt
    27061 ttgcaacatt gaacaacatt cgttgcaaat cgataacaac atgcaccttc aggatactat
    27121 ttattatgtt cggcaatgat attttcaccc gcgtaaaacg ttcagaaaat aaaaaaatgg
    27181 cggaaatcgc ccaattcctg catgaaaatg atttgagcgt tgacaccaca gtcgaagtat
    27241 ttattaccgt aacccgcgat gaaaagctta tcgcgtgcgg tggaattgcc ggaaatatta
    27301 ttaaatgcgt tgctatcagt gaatccgttc gcggtgaagg actggcgctg acattagcca
    27361 ctgaactgat aaacctcgcc tatgagcggc acagcacgca tctgtttatt tataccaaaa
    27421 ccgaatacga ggcgctgttc cgccagtgcg gtttttccac gctgaccagc gtacccggcg
    27481 tgatggtgct gatggaaaac agcgccacgc gactgaaacg ctatgccgaa tcgctgaaaa
    27541 aatttcgtca tccagggaac aagattggct gcattgtgat gaacgccaat ccctttacga
    27601 atggtcaccg ttatctgatt caacaagctg cggcacagtg cgactggttg catctgtttt
    27661 tagtcaaaga agattcttca cgcttcccct atgaagaccg gctggatctg gtgttaaaag
    27721 gcaccgccga tattccacgc ctgactgtgc atcgcggctc cgaatacatc atctcccgcg
    27781 ctacgttccc ttgctacttc attaaagaac agagcgtcat taaccattgt tacaccgaaa
    27841 ttgatctgaa gattttccgt cagtacctcg ctcccgcact gggtgtaact caccgctttg
    27901 tcggtactga acccttttgt cgcgttaccg cccagtacaa ccaggatatg cgctactggc
    27961 tgaaaacgcc gactatctcc gcaccgccca tcgaactggt tgaaattgag cggctgcgtt
    28021 accaggagat gccgatatcc gcttcccggg tacgtcaact gctggcgaaa aacgatctca
    28081 cggctatcgc gccgctggtc cctgcagtca cgctgcatta tttgcagaac ctgcttgagc
    28141 actcccgcca ggacgcggca gctcgtcaaa agacccccgc atgagaaaca ggtgaaaaat
    28201 gaaaataaac cagcccgccg ttgcaggcac ccttgagtct ggggatgtga tgatacgcat
    28261 cgccccactc gatacgcagg atatcgacct gcaaatcaac agcagcgttg agaaacagtt
    28321 tggcgatgca attcgcacca ccattctgga cgttctcgcc cgctacaacg tgcgcggcgt
    28381 acagctgaat gtcgatgaca aaggcacact ggactgcatt ttacgtgcac gactggaagc
    28441 cctgctggca cgcgccagcg gtatcccgac tctgccatgg gaggattgcc aatgatttcc
    28501 gcttcgctgc aacaacgtaa aactcgcacc cgccgcagca tgttgtttgt gcctggtgcc
    28561 aatgccgcga tggtcagcaa ctccttcatc tacccggctg atgccctgat gtttgacctc
    28621 gaagactccg tggcattacg tgaaaaagac accgcccgcc gcatggttta tcacgcgctg
    28681 caacatccgc tgtatcgcga tattgaaacc attgtgcgtg tcaacgcgct ggattccgaa
    28741 tggggtgtta acgacctgga agccgtcgtt cgcggtggtg cggacgttgt gcgtctgccg
    28801 aaaaccgata ccgctcagga tgttctggat attgaaaaag agatcctgcg tatcgaaaaa
    28861 gcctgtggtc gtgaacccgg cagcaccggc ctgctggcgg cgattgaatc tccgctgggc
    28921 attacccgcg cagtggaaat cgctcacgct tccgagcgtt tgatcggtat cgccctcggt
    28981 gcagaagact atgtgcgcaa cctgcgtaca gaacgctccc cggaaggaac tgaactgctg
    29041 ttcgcacgct gttccatttt gcaggccgcg cgctctgcgg gtattcaggc gttcgatacc
    29101 gtctattccg acgctaacaa cgaagccgga ttcctgcaag aagccgccca catcaaacag
    29161 ctgggctttg acggcaaatc gctgatcaac ccgcgtcaga ttgatctgct gcacaacctc
    29221 tacgcaccga cccagaaaga agtggatcac gcccgccgcg tcgtagaagc cgctgaagcc
    29281 gccgctcgcg aaggcctcgg cgtggtttcc ctgaacggca agatggtgga cggtccggtt
    29341 atcgatcgcg cccgtctggt gctctcccgt gcagaacttt ccggcatccg cgaagaataa
    29401 ggcaatcaaa atgacgcaga aaattgaaca atctcaacgg caagaacggg tagcggcctg
    29461 gaatcgtcgc gctgaatgcg atcttgccgc tttccagaac tcaccaaagc aaacctacca
    29521 ggctgaaaaa gcgcgcgatc gcaaactgtg tgccaacctg gaagaagcga ttcatcgctc
    29581 tggtttacag gacggcatga cggtttcctt ccatcacgct ttccgtggcg gtgacctgac
    29641 cgtcaatatg gtgatggacg tcatcgcgaa gatgggcttt aaaaacctga ctctggcctc
    29701 cagctccctg agtgattgcc atgcgccgct ggtagaacac attcgccagg gcgtggttac
    29761 ccgcatttat acctctggcc tgcgcggtcc actggcggaa gaaatctccc gtggtctgct
    29821 ggcggaaccg gtgcaaatcc actctcacgg cggacgtgtg catctggtac agagcggcga
    29881 actgaatatc gacgtggctt tcctcggcgt cccatcctgt gatgaattcg gtaatgccaa
    29941 cggttacacc ggtaaagcct gctgtggctc cctcggctat gcaatggttg atgccgacaa
    30001 cgcaaaacag gtcgtgatgc ttaccgaaga actgctgcct tatccgcata atccggcaag
    30061 cattgagcaa gagcaggttg atttgatcgt caaagttgat cgcgttggcg atgctgcaaa
    30121 aatcggcgct ggtgcgaccc gtatgaccac taacccgcgc gaactgctta ttgcccgtag
    30181 cgctgcggat gtgattgtca actctggcta cttcaaagaa ggtttctcca tgcaaaccgg
    30241 caccggcggc gcttcgctgg cggtaacccg tttcctggaa gacaaaatgc gtagccgcga
    30301 tattcgcgcc gacttcgccc tcggcggtat tactgcaacg atggttgatc tgcacgaaaa
    30361 aggtctgatc cgcaaactgc tggatgtgca gagctttgac agccatgctg cgcaatcgct
    30421 ggcccgtaac cccaatcaca tcgaaatcag cgccaaccag tacgctaact ggggttcgaa
    30481 aggcgcatcg gttgatcgtc tcgacgtggt ggtactgagc gcgctggaaa ttgacaccca
    30541 gttcaacgtt aacgtgctga ccggctctga cggcgtactg cgtggtgctt ccggtggtca
    30601 ctgcgatacc gcgattgcct ctgcgctttc catcatcgtc gcgccgctgg tacgcggtcg
    30661 tattccgact ctggtggata acgtgctgac ctgcatcacc ccgggctcca gtgtcgatat
    30721 tctggtcaca gaccacggta tcgcagttaa cccggcacgt ccggagctgg cagaacgtct
    30781 gcaggaagcg ggcattaaag tggtttccat tgagtggctg cgtgaacgtg cgcgtctgct
    30841 gaccggtgaa ccacagccga ttgaattcac cgaccgcgtc gttgccgttg tgcgttaccg
    30901 cgatggctcg gtgatcgatg ttgtacatca ggtgaaggaa taagccatgc acctgcttcc
    30961 tgaactcgcc agccaccatg cggtgtcaat tcccgagctg ctcgtcagcc gggatgaaag
    31021 gcaagcacgg caacacgtct ggctcaagcg ccatcctgtt ccactggtct cctttaccgt
    31081 ggttgcgcct aggccgatta aagacagtga ggtcacacgc cgaattttta atcatggcgt
    31141 gacagccttg cgtgccttag ccgcaaaaca gggctggcaa attcaggagc aggctgcact
    31201 ggtttccgcc agcgggccgg agggtatgtt gagcattgcc gccccggctc gcgacctcaa
    31261 gctcgccacc attgagcttg aacatagtca tcctctcggg cggttatggg atatcgatgt
    31321 cctgacgccc gaaggcgaaa ttctctcccg ccgcgactat tcactgccgc ctcgccgctg
    31381 cctgttgtgc gagcaaagcg cagccgtctg cgcgcgtgga aaacccatca actgaccgat
    31441 ttactcaacc gcatggaggc actgctgaac gatgtcgatg cctgcaacgt caactaaaac
    31501 cacaaagctt gcgacgtcat taatcgatga gtacgccctg ctgggctggc acgccatgct
    31561 gactgaagtc aatctgtcac cgaaaccagg tctcgtggat cgcattaact gcggtgcgca
    31621 taaagatatg gcgctggaag atttccaccg cagcgcgctg gcgattcagg gctggctacc
    31681 ccgtttcatt gaatttggtg cctgtagtgc ggaaatggca ccagaagcgg tactccacgg
    31741 attacgccca attggtatgg cttgcgaagg tgatatgttc cgcgccaccg cgggcgtaaa
    31801 cacgcataag ggcagcattt tttctttagg gctactgtgt gcggcaattg gccgtttgct
    31861 tcagctcaac cagtcgctaa cgccaacaac cgtttgttct acggcggcaa gtttctgccg
    31921 tggcctgacc gatcgcgaac tgcgtaccaa taattcacaa ctgacggcag gtcaacggtt
    31981 gtaccagcag cttgccctta ccggcgcacg cggtgaagcc gaagcgggtt atccactggt
    32041 gatcaaccac gccttgccgc attacctcac tctgctggat caggggttag atcctgaact
    32101 ggcattgctc gataccttgc tcctactgat ggcgatcaac ggcgatacca acgttgcttc
    32161 gcgcggtggc gagggggcct gcgctggcta cagcgcgagg cgcaaacatt attgcaaaaa
    32221 gggggcattc gaacccccgc cgatctcgat tatctccggc agttcgacag ggagtgtatc
    32281 gaacgaaatc tcagtctagg cggcagtgcc gacctgctga tccttacctg gtttttagca
    32341 cagatttaat tatttaagca cttgataaat ttggaaatat taattttcgg agaacccgta
    32401 tgtctttagc aaaagataat atatggaaac tattggcccc actggtggtg atgggtgtca
    32461 tgtttcttat ccctgtcccc aacggtatgc caccacaggc atggcattac ttcgctgtgt
    32521 ttgtggcaat gattgtcggc atgatcctcg agccaattcc ggcaacagcg atcagtttta
    32581 ttgcggttac tatttgcgtt attggcagta attacctgct ctttgatgcc aaagaattag
    32641 ctgacccagc gtttaatgcg caaaaacagg cgctgaaatg gggtctggct ggtttttcca
    32701 gcaccacggt atggctggta tttggcgcat ttatttttgc attagggtat gaagtttccg
    32761 ggttaggtcg tcgcattgcc cttttcctgg tgaaattcat gggcaaacgc acgctgacgt
    32821 tgggttatgc gattgtcatt atcgacattc tgctggcgcc gtttacaccg tccaacaccg
    32881 cgcgtaccgg gggtacggtt tttccggtca ttaaaaacct gccgccgttg tttaaatcat
    32941 tccccaacga tccgtccgcg cgtcgtattg gcggctattt gatgtggatg atggtcatta
    33001 gtaccagtct gagttcgtcc atgtttgtca ccggtgcggc accaaacgtg ctgggtctgg
    33061 agttcgtcag caaaattgcc ggtatccaga ttagctggtt gcagtggttc ctctgcttcc
    33121 tgccggttgg ggttatcttg cttatcattg cgccgtggct ttcctacgtg ctgtacaaac
    33181 cggaaatcac acacagtgaa gaagtggcaa cctgggcggg tgatgaactg aaaaccatgg
    33241 gtgcgctgac acgcagagag tggacactga ttggccttgt attgctcagc ttaggtttgt
    33301 gggtttttgg cagtgaagtc attaatgcta ctgcagttgg tctgctggca gtttcgctaa
    33361 tgctggctct gcacgttgtg ccttggaaag atattacccg ctataacagc gcatggaaca
    33421 cgctggtcaa cctggcaact ctggttgtga tggctaacgg cctgactcgt tctggcttta
    33481 ttgactggtt cgccggtacc atgagtacgc acctggaagg attctcacca aacgcaacgg
    33541 tgattgtact ggttctggtg ttctactttg cacactacct gtttgccagc ctgtctgcgc
    33601 acaccgcaac catgctgccg gttattctgg ccgtcggtaa aggtattccg ggcgtaccaa
    33661 tggaacaact gtgtatcctg ctggtgctgt ctatcggtat catgggctgt ctgacgccct
    33721 atgcaaccgg tcctggggtg attatttacg gctgtggcta tgtgaaatca aaagattact
    33781 ggcgtcttgg cgcaatcttc ggggtgattt atatctctat gttgctgttg gttggctggc
    33841 cgattctcgc catgtggaac taatacgttc gccaaacgct gaataaatca tcacgcccgc
    33901 caggtaagcc cacctggcgg gcgtgatgat ttaatagata gtattcagtg tatgtatgag
    33961 ttccacaccc attatgaaag cattctggcg taacgccgcg ttgctcgcgg tttctctgct
    34021 tcccttctct tctgccaacg ccgtagcgtt gcaggcaaaa cagtatggcg attttgatcg
    34081 ctatgtcctg gccctctcct ggcaaaccgg attttgccag agtcaacacg atcgaaatcg
    34141 taacgaacga gatgaatgtc gcctgcaaac cgaaacgacc aacaaagctg attttctgac
    34201 cgtacatggt ctgtggccag gattgcctaa atcggttgct gcccgtggtg ttgatgaacg
    34261 ccgctggatg cgcttcggtt gcgctactcg cccaatcccg aatctaccag aagcgcacgc
    34321 cagccggatg tgttcatcgc cggaaaccgg gttatcactg gaaacggccg ctaaactaag
    34381 tgaagtcatg ccaggagctg gcggacgttc ctgcctggaa cgctacgaat atgccaaaca
    34441 cggtgcctgc tttggttttg atccggacgc atacttcggt acgatggtac gcctgaatca
    34501 agaaattaaa gagagcgaag ccggaaaatt ccttgcggat aattacggta aaacagtgag
    34561 ccgccgtgac tttgacgccg cctttgccaa aagctgggga aaagagaacg tgaaagcagt
    34621 taagctaacg tgccagggta accctgcgta tttgactgaa attcagatct cgatcaaagc
    34681 tgacgccatc aacgctccgc tttctgcaaa ctcattcttg ccacaaccac acccaagcaa
    34741 ctgtggcaaa acctttgtga ttgataaagt gggttattaa tcatctgatt tacaaaacac
    34801 gctaattcgt cttccataaa c
//
LOCUS       DADMIB010000025        34544 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.025, whole genome shotgun sequence.
ACCESSION   DADMIB010000025 DADMIB010000000
VERSION     DADMIB010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34544
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.025"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            235..718
                     /locus_tag="JNZ89_001163"
                     /pseudo
     CDS             235..718
                     /locus_tag="JNZ89_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553611.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-associated peptidase"
     gene            900..1323
                     /locus_tag="JNZ89_001164"
                     /pseudo
     CDS             900..1323
                     /locus_tag="JNZ89_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000368730.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YfbM family protein"
     gene            complement(1390..2847)
                     /gene="nuoN"
                     /locus_tag="JNZ89_001165"
     CDS             complement(1390..2847)
                     /gene="nuoN"
                     /locus_tag="JNZ89_001165"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HAY8935096.1"
                     /translation="MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
                     LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK
                     DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT
                     ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGMMIVGLGFKL
                     SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAII
                     AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYL
                     FSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGF
                     IGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQY
                     SAGGIVVLISALLVLVLGVWPQSLISIVRLAMPLM"
     gene            complement(2854..4383)
                     /gene="nuoM"
                     /locus_tag="JNZ89_001166"
     CDS             complement(2854..4383)
                     /gene="nuoM"
                     /locus_tag="JNZ89_001166"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HAY8935097.1"
                     /translation="MLLPWLILIPFIGGFLCWQTEHFDVKVPRWIALITMGLTLALSL
                     QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV
                     LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
                     ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG
                     VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
                     PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS
                     QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA
                     VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS
                     QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR
                     P"
     gene            complement(4547..6388)
                     /gene="nuoL"
                     /locus_tag="JNZ89_001167"
     CDS             complement(4547..6388)
                     /gene="nuoL"
                     /locus_tag="JNZ89_001167"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HAY8935098.1"
                     /translation="MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV
                     TAFIGVDFFANGEQAYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY
                     ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD
                     PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
                     TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
                     PEILHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
                     LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYFCFLVGGAALSALPLV
                     TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG
                     VTHSLPLIVLLILSTFVGALIVPPLQSVLPQTTELAHGSMLTLEITSGVVAVVGILLA
                     AWLWQGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
                     SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR"
     gene            complement(6385..6687)
                     /gene="nuoK"
                     /locus_tag="JNZ89_001168"
     CDS             complement(6385..6687)
                     /gene="nuoK"
                     /locus_tag="JNZ89_001168"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HAY8935099.1"
                     /translation="MIPLQHGLILSAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
                     AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
     gene            complement(6684..7238)
                     /gene="nuoJ"
                     /locus_tag="JNZ89_001169"
     CDS             complement(6684..7238)
                     /gene="nuoJ"
                     /locus_tag="JNZ89_001169"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HAY8935100.1"
                     /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF
                     SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI
                     MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
                     EERAGEVLSNRKDDSAKRKTEEHA"
     gene            complement(7250..7792)
                     /gene="nuoI"
                     /locus_tag="JNZ89_001170"
     CDS             complement(7250..7792)
                     /gene="nuoI"
                     /locus_tag="JNZ89_001170"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HAY8935101.1"
                     /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
                     RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
                     GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
                     KDKGEAENEAKPIDVKSLLP"
     gene            complement(7807..8784)
                     /gene="nuoH"
                     /locus_tag="JNZ89_001171"
     CDS             complement(7807..8784)
                     /gene="nuoH"
                     /locus_tag="JNZ89_001171"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015875065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HAY8935102.1"
                     /translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ
                     NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP
                     VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL
                     GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE
                     QELADGYHIEYSGMKFGLFFVGEYIGIVTISALMVTLFFGGWQGPLLPPFIWFALKTA
                     FFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ"
     gene            complement(8781..11507)
                     /gene="nuoG"
                     /locus_tag="JNZ89_001172"
     CDS             complement(8781..11507)
                     /gene="nuoG"
                     /locus_tag="JNZ89_001172"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HAY8935103.1"
                     /translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA
                     CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD
                     CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY
                     YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
                     WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
                     DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE
                     ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
                     VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
                     VEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLE
                     VIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVV
                     LENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE
                     GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE
                     LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG
                     NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS
                     VPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT
                     RVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ"
     gene            complement(11560..12897)
                     /gene="nuoF"
                     /locus_tag="JNZ89_001173"
     CDS             complement(11560..12897)
                     /gene="nuoF"
                     /locus_tag="JNZ89_001173"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HAY8935104.1"
                     /translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
                     LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
                     LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI
                     MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
                     VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
                     YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN
                     MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
                     PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
     gene            complement(12894..13394)
                     /gene="nuoE"
                     /locus_tag="JNZ89_001174"
     CDS             complement(12894..13394)
                     /gene="nuoE"
                     /locus_tag="JNZ89_001174"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012124159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HAY8935105.1"
                     /translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ
                     KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY
                     QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE
                     LLERYK"
     gene            complement(13397..15199)
                     /gene="nuoC"
                     /locus_tag="JNZ89_001175"
     CDS             complement(13397..15199)
                     /gene="nuoC"
                     /locus_tag="JNZ89_001175"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HAY8935106.1"
                     /translation="MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR
                     TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHL
                     ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM
                     PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL
                     NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
                     YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
                     PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA
                     SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF
                     DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT
                     LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSY
                     AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR"
     gene            complement(15293..15955)
                     /locus_tag="JNZ89_001176"
     CDS             complement(15293..15955)
                     /locus_tag="JNZ89_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017490251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HAY8935107.1"
                     /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND
                     MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
                     FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
                     RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD
                     EI"
     gene            complement(15971..16414)
                     /gene="nuoA"
                     /locus_tag="JNZ89_001177"
     CDS             complement(15971..16414)
                     /gene="nuoA"
                     /locus_tag="JNZ89_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoA"
                     /protein_id="HAY8935108.1"
                     /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
                     SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
                     AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR"
     gene            complement(17045..17983)
                     /gene="lrhA"
                     /locus_tag="JNZ89_001178"
     CDS             complement(17045..17983)
                     /gene="lrhA"
                     /locus_tag="JNZ89_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LrhA"
                     /protein_id="HAY8935109.1"
                     /translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
                     QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
                     IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA
                     FKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYV
                     ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL
                     AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE"
     gene            18902..20119
                     /locus_tag="JNZ89_001179"
     CDS             18902..20119
                     /locus_tag="JNZ89_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HAY8935110.1"
                     /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
                     PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
                     GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
                     IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA
                     EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
                     CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
                     FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL
                     SKFARFLSGYHQL"
     gene            20203..20802
                     /gene="yfbR"
                     /locus_tag="JNZ89_001180"
     CDS             20203..20802
                     /gene="yfbR"
                     /locus_tag="JNZ89_001180"
                     /EC_number="3.1.3.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
                     /protein_id="HAY8935111.1"
                     /translation="MKQSHFFAHLSRLKLINRWPLMRNVLTENVSEHSLQVAMVAHAL
                     AAIKNRKFGGNVNAERIALLAMYHDASEVLTGDLPTPVKYFNSQIAQEYKAIEKIAQQ
                     KLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAYLKCLEELAAGNNEFLLAK
                     TRLEATLEARRSQEMDYFMEVFVPSFHLSLDEISQDSPL"
     gene            complement(20861..22693)
                     /locus_tag="JNZ89_001181"
     CDS             complement(20861..22693)
                     /locus_tag="JNZ89_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HAY8935112.1"
                     /translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT
                     VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV
                     AGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
                     VNSELLREGYHGFSFFSVTPVGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR
                     DLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN
                     GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE
                     SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML
                     AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLM
                     GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM
                     LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV
                     SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF"
     gene            complement(22780..23430)
                     /gene="hxpA"
                     /locus_tag="JNZ89_001182"
     CDS             complement(22780..23430)
                     /gene="hxpA"
                     /locus_tag="JNZ89_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HpxA"
                     /protein_id="HAY8935113.1"
                     /translation="MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIH
                     GKQAITSLRHFMAGKSEADIAAEFTCLEHIEATETEGITALPGAIALLNHLNKAGIPW
                     AIVTSGSMPVARARHKIAGLPAPKVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV
                     AEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQLNGDVIIQ"
     gene            complement(23441..23935)
                     /locus_tag="JNZ89_001183"
     CDS             complement(23441..23935)
                     /locus_tag="JNZ89_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007371080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbU family protein"
                     /protein_id="HAY8935114.1"
                     /translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM
                     RELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEAR
                     YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACLRQYHLSANEINQ
                     IINA"
     gene            complement(24019..24474)
                     /locus_tag="JNZ89_001184"
     CDS             complement(24019..24474)
                     /locus_tag="JNZ89_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HAY8935115.1"
                     /translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT
                     RYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI
                     LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
     gene            24812..26014
                     /gene="ackA"
                     /locus_tag="JNZ89_001185"
     CDS             24812..26014
                     /gene="ackA"
                     /locus_tag="JNZ89_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HAY8935116.1"
                     /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI
                     KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
                     VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE
                     SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
                     AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL
                     LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGI
                     GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
                     QDASRLTA"
     gene            26089..28233
                     /gene="pta"
                     /locus_tag="JNZ89_001186"
     CDS             26089..28233
                     /gene="pta"
                     /locus_tag="JNZ89_001186"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HAY8935117.1"
                     /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
                     TGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA
                     EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFG
                     GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL
                     GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL
                     LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT
                     NTWQTSLSLQSFNQEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF
                     RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV
                     ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG
                     LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL
                     AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP
                     LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG
                     MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ"
     gene            28423..29943
                     /gene="yfcC"
                     /locus_tag="JNZ89_001187"
     CDS             28423..29943
                     /gene="yfcC"
                     /locus_tag="JNZ89_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative basic amino acid antiporter YfcC"
                     /protein_id="HAY8935118.1"
                     /translation="MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQ
                     EVQYQVDGQTKTRKVVDPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTS
                     GSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
                     GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
                     GIAGVPVLSGSGLRIVVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQAD
                     VEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVSRL
                     NGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAI
                     SGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQVTVLAFQFG
                     DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH"
     gene            complement(29976..30518)
                     /gene="yfcD"
                     /locus_tag="JNZ89_001188"
     CDS             complement(29976..30518)
                     /gene="yfcD"
                     /locus_tag="JNZ89_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase YfcD"
                     /protein_id="HAY8935119.1"
                     /translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV
                     HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE
                     HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKA
                     LALWMKRNAKNEAVETETAE"
     gene            complement(30576..31127)
                     /gene="yfcE"
                     /locus_tag="JNZ89_001189"
     CDS             complement(30576..31127)
                     /gene="yfcE"
                     /locus_tag="JNZ89_001189"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HAY8935120.1"
                     /translation="MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN
                     ALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFL
                     THGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGML
                     DNDVLSVIALNDQSIIAQVAINP"
     gene            complement(31183..31815)
                     /gene="yfcF"
                     /locus_tag="JNZ89_001190"
     CDS             complement(31183..31815)
                     /gene="yfcF"
                     /locus_tag="JNZ89_001190"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
                     /protein_id="HAY8935121.1"
                     /translation="MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGE
                     HLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARA
                     RQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASVAMAEHLLALGQPNLFGEW
                     CIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG"
     gene            31951..32598
                     /gene="yfcG"
                     /locus_tag="JNZ89_001191"
     CDS             31951..32598
                     /gene="yfcG"
                     /locus_tag="JNZ89_001191"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSH-dependent disulfide bond oxidoreductase"
                     /protein_id="HAY8935122.1"
                     /translation="MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL
                     RISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLF
                     WQVGELGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS
                     IADIACWPWVNAWTRQRIDLAMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS"
     gene            32655..33017
                     /gene="folX"
                     /locus_tag="JNZ89_001192"
     CDS             32655..33017
                     /gene="folX"
                     /locus_tag="JNZ89_001192"
                     /EC_number="5.1.99.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate 2'-epimerase"
                     /protein_id="HAY8935123.1"
                     /translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK
                     ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK
                     LHALRYADSVSMTLSWQR"
     gene            33038..33931
                     /locus_tag="JNZ89_001193"
     CDS             33038..33931
                     /locus_tag="JNZ89_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family protein"
                     /protein_id="HAY8935124.1"
                     /translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR
                     VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS
                     DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL
                     LRTGVVLAPDGGILGKMLPPFRLGLGGPIDSGRQYLAWIHIDDMVNGILWLLDNELRG
                     PFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRL
                     EEAGFAFRWYDLEEALADVVR"
     gene            complement(33979..>34544)
                     /locus_tag="JNZ89_001194"
     CDS             complement(33979..>34544)
                     /locus_tag="JNZ89_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8935125.1"
                     /translation="GYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSA
                     FPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKA
                     LFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQE
                     MLDRGLDRELVMMVTRLSPDDLIAQSH"
BASE COUNT         8663 a         9395 c         8642 g         7844 t
ORIGIN      
        1 tgtatagatc taacaaccgt aataaaacaa atactcataa ctcattataa ataatgataa
       61 aataacgtct tttattgata atttatatat gggaaaaatt ccttttgtta tattgtttct
      121 gatttcactc cctctgatta tttttaccaa ccctgggtca ctgcattacc accaacgccc
      181 cgacacgtca gtcctgagca attagaaaaa acagttcgtt atcttacaca aactgtgcat
      241 ccacgtaatg ccgacaatat tgataatctg aataggtccg tagagtatat aaaagagttc
      301 tttgtcagta gcggtgccag agttaccgcg cagggcgtcc ccgattggct attacgactc
      361 tgcgcctggt agccaggatt acctttaccc gcaatgtcct ggctttatcc cgatcggggg
      421 gactttattg cctggtcggc agaatacagg atatcaacgc cgctcgtcag gtaaaaacgg
      481 cattgttatc atcccgggat ttatctgttt attctatgaa tgccccatgg tttattcccg
      541 gtattgattt ctctgaccac ctgaattatt ggcaacacga tattcccgcc gtaatgatta
      601 ctgacaccgc tttttatcgt aataaacaat accacttgcc cggtgataca gcagacagat
      661 tgaattatca gaaaatggct cagatggtgt tataaccttg ttacacaaca gtaaataata
      721 aaaatttctc gaggcgggtc cagaaacagc gacatgtaca ttttattttc cctcgtctgt
      781 tttaagatgc gaaacataaa attcaatgga ggaaaaataa atgggaatga ttggttattt
      841 tgcagaaatt gactcagaaa agattaacca atctgcttga gtctactgaa aaacctttga
      901 tggataatat acatgacacg ctttcaggat tacgccgact ggatattgat aaacgctggg
      961 attttttaca ctttgggctg acaggcaccc ctgcttttga tcccgcgaag aatgatccgc
     1021 tgagtcgtgc cgtgcttggt gaacacagcc tcgaagatgg catagatggc ttcctgggat
     1081 tgacctggaa tcaggaatta gccgcgacaa tcgaccgact ggaatcactg gatcgaagta
     1141 agctgcgtaa acagttttcc attaagcgac tatgaaatgg agatttatcc gggagtgacc
     1201 ttttcagaag agttagaggg gcaactcttt gcctcgatca tgcttgatat ggaaaagctg
     1261 attagcgcgt atcgacgtat gctgcgacaa gggaatcatg cgctgacggt tattgttggg
     1321 tgatggtgtc agagcgccaa aaaaaaccgc cgaacatgtc ggcggttttc tgacttacaa
     1381 actaacagat tacatcagcg gcattgctaa ccgcacaata ctaatcagcg attgtggcca
     1441 tacacccagc accagtacca acagtgcaga aatcagcacc acgataccgc ccgcgctgta
     1501 ctgccagttt gacggtgcat cgcgacccgg ttgttccggt gcgtgcaggt acaggctcac
     1561 cgccacgcgc aggtagtagt agaggccgat tgccgaaccg acaaccacgg cacccaccag
     1621 ccaccacaag tgtgcctgga caccgaccgc cagcacgtag aacttaccga taaagcccag
     1681 cgtcatcggg ataccggcca gagacagcat catcaccgtc atcactgccg cgaggatcgg
     1741 acgatgccag aacagaccgc ggtaagagaa cagggaatca gcatccgggc cacgatacgg
     1801 gctggacatc aggctgacca cgccgaacgc gccgaggctg ctgaacagat aaccggccag
     1861 gtaaacccct accgcttcca tcgacatctc gccggtttgc agcgcaatca gcgccaccag
     1921 cagatagccg aggtgagaga tagatgagta accgagcaga cgtttgatgt tggtctggct
     1981 caacgccatc aggttaccga agatgatgga ggcaaaggcg ataatcgcca gtactacgcg
     2041 aatcgcttcg ctgtcaccca ccggtgcata gaggaacaga cgcatcacca caccgaagat
     2101 agcgattttg ctcgccgtcg ccaggaaagt ggaaaccggc gcaggcgcgc cttggtatac
     2161 gtctggcgtc cacaggtgga acggcaccag agagagtttg aagccgaggc caacaatcat
     2221 catgccgaaa cctgccagca acagcggctc gttgagcata ccgtcaccga ggtttttacc
     2281 cagcgcgaca aacgacaggt cgccagactg cgcatacacc agcgccatac caaacagcag
     2341 gaaagaagac gctgcggcag aaaggatggt gtatttgata ctggcttcca gcgaacgttt
     2401 ctggcggaaa gcgtaaccga ccaggccaaa cagcggcaaa gagatcagtt caataccgag
     2461 gaacagagac gccagatggt ttgcattcgc cagcaggatc ccgcccagcg cggcaattaa
     2521 caccaacagg tagaactcat ccttgttgtc gttatagcct tcaagccacg ggtaggcgaa
     2581 agtacaggtg gcgaggctcg ccaacaatac cagcccggtg taaagcatgg cgaaaccatc
     2641 aacgcgcatc agcggcgtaa cgtccatagc gcccgcctgg ccaacaaacc agagcgaaac
     2701 cagcgccgcg ttaagcccaa taaccgagag cgtagcgttg aggaaatgat tgcgtcgcca
     2761 cgcaatggag agcatcacaa ccaccaccgt taagccgacg atcagcaacg gtagcagtgc
     2821 gatcaggttt tgtggagtta ttgtcatggc gatttacggc cttgtagtag taacggaatt
     2881 aacaaaccac tgctggatat tgccaatcgc ggagtgcgag gtatccagaa tcggctgcgg
     2941 atagaagccc agcagtacca gcagcaccac cagcaacagg atcataaaca gctcacgcag
     3001 cgacatccct ggcagttcct ggctggcaat ctggcttttc gctttaccga agtaagcgcg
     3061 atgcaacatc gccagcgaat aaacagatgc aaagaccagc ccaaaggtag agataacggt
     3121 aatcaccggg acaacctgga agctgccgaa cagaatcata aattcgccga cgaagttacc
     3181 ggtgccaggc atcccaagcg ttgccaccgc aaagaacagc gacaatgctg gcagccattt
     3241 catcttgctc cacagaccgc ccatcatgcg catgtcgcgg gtatggatac gttcataaag
     3301 ctgaccacaa agaataaaca gacccgccgc cgacaaaccg tgcgcaatca tctggattac
     3361 cgcgccctgg taggccaact ggctgccggt gtagatagca atcagcacga agcccatgtg
     3421 ggaaaccgag gtgtaggcga tcagacgttt gatatcggtc tgggcgaagg ccatccacgc
     3481 accgtagaag atgccgataa cacccagcca catagcaatt ggcgcgaact ctgccgacgc
     3541 gttcgggaac agcggcaggg agaaacgcag caaaccgtaa gcggcagttt tcagcaagat
     3601 ccccgcgaga tcaacggaac cggcggtcgg agcctgggag tgcgcatccg gcagccagcc
     3661 atgcagcgga accaccggca ttttgactgc gaaggcgatg aagaagccca gcattaacag
     3721 gtattccaca ccactggaca ttggcgtatt cagcagctct tcatagttga aggtccagac
     3781 gccggtcgca ttgtagtgaa caaaaaccag cgccaggatg gcaatcaaca tcaccaggcc
     3841 actcgcctgg gtgtaaatga agaacttggt tgccgccgtg atacgcgttt taccgtcaga
     3901 ggctttatgc ccccacagtg cgatcaggaa gtacatcggc accagcatca tttcccagaa
     3961 gaagaagaac aggaacatgt cgatggcaag gaacacgccg ataacgccgc ccaggatcca
     4021 catcaggttg aggtggaaga agccctgata tttttcgatc tctttccacg aacagagtac
     4081 cgccagcaca ccgagcagac cggtcagcac gaccatcagc agcgacagac cgtcaatggc
     4141 gagatgaata gagataccaa aacgcgggat ccacggcatg tcgaattcag actgccactg
     4201 cggaattccg gcggattgcg tcagtgaata accgccctgc aaccacagtt gcagcgacag
     4261 cgccagcgtc aatcccatgg tgatcagcgc gatccagcgt ggcaccttga cgtcaaagtg
     4321 ttcggtctgc cagcacagga agccgccaat aaagggaatt aatattagcc agggtagtaa
     4381 catggcgatc tttattcctt gtaaaagtcc cgtcaggacc ggattttcaa cgaattctca
     4441 cgacagaaaa ttctcttcgg actgggggta gtgtcggatg cgccgcgaag gcagcttatc
     4501 cgacctacgt tcttatatgc ccaggagcaa tcccacaatc cttaactcaa cgcagtacca
     4561 tcaacagtgc cagcaccacg accgcaccga tgctcatgga tgccacatac cagcgcagat
     4621 aaccgttctc gcttaacagc aggcctttac ctgcaaagcg ggaaagaacc gccggaatgt
     4681 tcatcattga gttcagcgga tcgcgtttca gcaaccaggc aatacccaga aacggcttga
     4741 cgaacacttt gtcgtacagc cagtcaaagc cccaggcgtt gtaccaccag gtgcccagca
     4801 gacggcccgg cgcactgttg gcaatggagg tcaccagagt acgtttaccc tgccacagcc
     4861 aggctgccag cagaatgccg accaccgcga ccacgccaga ggtaatttcc agggtcaaca
     4921 tgctgccgtg cgccagttcc gtcgtttgcg gaagcacgct ctgcagcggc ggtacaatca
     4981 gtgcgccaac gaaggtggaa aggatcagca gcacaatcag cggcaggctg tgagttaccc
     5041 ctttcacggc gtgagcgtga atttgttctt ttccgtggaa gacgatgaaa atcatacgga
     5101 aggtgtagag cgaggtcata aacgcaccga ccagacctgc caccatcaga ttgatatgac
     5161 cattcgccat cgcacccgcg aggatctcat ccttactgaa gaagcccgca gtgaccagcg
     5221 gtagtgccga cagtgctgcg ccgcccacca ggaagcagaa ataaaccagc ggaatagatt
     5281 tacgcagacc gcccatcttg aagatgttct gttcgtgatg gcaggccaga atgacggaac
     5341 cggatgccag gaacagcagc gctttaaaga acgcgtgagt catcaagtgg aaaatcgccg
     5401 catcccatgc ctgcacgcca agcgcgagga acatgtagcc aatctggctc atggtagagt
     5461 aagcgagaac acgtttgatg tcggtctgta ccagcgcggc aaaaccggcc agcagcagcg
     5521 taaccgcccc gacaatgccc accagatgca gaatttccgg cgtcatcagg aacaggccgt
     5581 gggtacgggc gatcaggtag acacccgcgg ttaccatggt tgcggcgtgg atcagcgcgg
     5641 agacaggcgt cgggcccgcc atcgcgtcgg caagccatgt ctgcaacggc aactgcgcag
     5701 atttaccgac cgcaccgccc agcagcatca gcgtcgccca catcagcatg ttattgccgt
     5761 cagcaaagtg cgctggtgcc agttccacca tttcgcggaa gttcagggtg cccagttcgt
     5821 tgtaaagaat gaacagcgcg aaagcgagga acacgtcacc cacacgggtc acgacgaacg
     5881 ctttcattgc cgctgcgcca ttcttcggat cggtgtaata gaacccgatc agcagatagg
     5941 agcacaggcc cacgccttcc cagccgaggt acatcagcag caggttatcg gcgagaacca
     6001 gaactaccat gctggcgatg aacaggttgg tgtaggcgaa gaagcgagag tagccctctt
     6061 caccgcgcat gtaccaggag gcgtacatgt gaataaggaa acccacacca gtgaccaccg
     6121 agagcatggt cagcgacagg ccgtccagca ccaggttaaa accgatgtta aagtcgccta
     6181 ccgacatcca cgtccacagc ggctggctgt atgcctgctc gccgttagcg aagaaatcaa
     6241 cgccgataaa ggcggttacc agcgccgcca ggcccacaga gccaacgccg acgatcgccg
     6301 aaacgttttc agaccagcgc ccacgggaga acgccagcag gacgaagcca atcaatggca
     6361 aaataatggt taaggcaagc atgttcatcc gcgcatctca cttactgaat cgatgttcag
     6421 gttctggcga cgacggtgaa gttgcagcag cagcgcaagg ccgatactcg cttctgccgc
     6481 cgcgaggctg atggcgagaa tgtacatcac ctgaccgtcg gtctgacccc agtagcttcc
     6541 ggcgaccaca aaggccagcg cggaggcgtt aatcatgatt tccagaccaa tcagcataaa
     6601 cagcagattg cgacggataa ccagaccggt taagccaaga acgaataaga ttgccgagag
     6661 gatcagtcca tgttgtaagg ggatcatgcg tgctcctccg tttttctttt cgcgctgtcg
     6721 tctttacgat tgctcagcac ttcacccgca cgctcttcac gaccgacgtg gaaggccaca
     6781 accagacccg cgagcagcag catagaagcc agttccaccg ccagtacgta aggcccgaac
     6841 agcgtaatac ccactgcttt agcactgatt ggcgtaccgt cgataccctg atcattaaca
     6901 ccaaggatgg cgtaaacaat caccaccagc atgatggccg acaaaattgc cggaccaatc
     6961 cacacctgcg gtttcagcca ctggcgttcc tgttcgattt ctgaaccgcc caggttgagc
     7021 atcatcacca cgaacacgaa cagcaccata atggcacccg cgtagacgat aatttccagc
     7081 gcaccggcga agtaagcgcc cagtgagaag aacaccccgg aaatcgccag cagcgaaata
     7141 atcaggtaca gcagtgcgtg taccggattg gtatgggtga tcactcgcaa ggtcgcaagt
     7201 atggctatca ggccacagat ataaaaagcg aactccattg cccctctcct tacggtaaca
     7261 ggctcttgac gtcgataggc ttggcttcgt tctctgcttc gcccttatct ttgccgtcga
     7321 ttgccatacc tgccatccgg tagaagttat attccgggta tttgcccgga ccggagatca
     7381 gcagatcctc tttttcgtaa accagatcct ggcgcttgta ttcccccatt tcgaaatccg
     7441 gggttaactg aatcgccgtg gtcggacagg cttcttcgca cagaccacag aaaatgcagc
     7501 gtgagaagtt gatgcggaaa aattccgggt accagcgacc gtctttggtt tctgcttttt
     7561 gcagcgagat acagccgacc gggcaggcta ccgcgcagag gttacaggct acgcaacgct
     7621 cttcgccgtc cgggtcgcgg gtcagaacga tacgaccacg ataacggggc ggcagataga
     7681 ccggctcttc cgggtacatt cgcgtttcgc gtttggcgaa cgcgtgcagg ccgatcatcc
     7741 agatactacg aacctgggtg ccgaaaccta ctaacaattc ttttaaggtc atggtcttat
     7801 tgccccttat tgcgcctgcc agagaatgac agccgccgtt accagcaagt tgatcagcgt
     7861 cagcggcagg cagattttcc agccgaagga cattacctgg tcataacgcg gacgcggtaa
     7921 cgacgcacga atcaaaatga acatcatcat aaagaacgcg gttttcaacg cgaaccagat
     7981 gaatggcggt aacaacgggc cttgccagcc accgaagaac agcgtcacca tcaatgcaga
     8041 gatggtcaca atcccgatgt actcacccac gaagaacaga ccgaacttca taccggaata
     8101 ttcaatgtgg taaccatccg ccagttcctg ctcggcttcc ggctggtcaa acgggtgacg
     8161 gtgacatacc gccacgcccg cgatggcaaa ggtaataaaa ccaaagaatt gcgggataac
     8221 gttccacaca tgcgcctggc tgttgacgat gtcggtcatg ttgaatgaac cggcctgcgc
     8281 caccacgccc atcagggaaa gcccgaggaa cacttcgtag ctcagggtct gcgcagaagc
     8341 acgcatcgca cccagcaacg agtatttgtt gttacttgac cagcccgcaa acagcaccgc
     8401 gtaaaccgcc agacctgcca tcatcaggaa gaacaaaatc ccgatgttca ggtcggcaac
     8461 cacccaaccc ggactgactg gcacaatcgc aaaggccagc agcagcgagg taaaggcaat
     8521 catcggtgcc agggtaaaga tgacgcgatc cgagaatttc gggatccagt cttctttaaa
     8581 gaacattttg atcatgtccg caaccagctg gagcgaaccg ccccagccaa cacggttagg
     8641 tccataacgg ttctggaaca gacccagcag gcgacgttcg ccaaagctca tgaatgcccc
     8701 acaggtgaca accaccagca ggatcaccac cgctttgagg atggtcagca ggatctcaat
     8761 cagttccggt gatatccaac tcattgttgt gcctccttga gatcctcaag atgcgcgcca
     8821 gccagcaccg gagcaatgcc ggacataccc atcggcaagc ccacctgccc tgccgtcagt
     8881 ccttcggcga tttcaaccgg cagcgtgacc gtgttgccat cgtaactaaa ggagacgcgt
     8941 gtacctgcgt tcacacccaa cttcgcggca tccgctgggt tgagtttgat gtacggctgc
     9001 ggcatacggc tctggaagac cggagcacgc tgtgacaatt catcgctgcc aaacaggtgg
     9061 taatacggcg caatacgcca tttcccgtcc tgcggctgga agcgtgccgg tacgctggtg
     9121 aagtaatcca gaccattctc gctggtttca aacagacgca cgcccggatc gccaaagcgc
     9181 agtttgccgc ccacttcgtc ctggaatttg ttccacgcct gcggggagtt ccagcccggt
     9241 gcccaggcaa acggcacttg cgaacggtgc gcggtcggct ggttgttacc ttccatcgag
     9301 aaggtgaaca tggtgtcaat atcctgcggc tgacgcggct catgaacgct gatattggcg
     9361 cgcatggcgg tacgaccgct gtaacggtgc ggttcacggg ccagtttctg cccacgaata
     9421 cggaatgtcg catccggcgc agcatctttg atacctgcca gttccgggat tttcgccaca
     9481 acagcgtcaa tcacatggtc gagctgcgtc cagtccactt cacggctcag cagggtgctg
     9541 tgcagcgagt gcagccagcg ccagctttcc agcatgacag ttttgctgtc gtaataagcc
     9601 ggatcgtaaa cctggaagaa acgttgggcg cgaccttcat tattaattac cgtaccgtcg
     9661 ctttcagcaa agctggcggc ggaaagtacc agatgggcgt tttccatgat cgctgtacgc
     9721 tgatggtcaa ccaccatcac cagcggtgct ttagccagcg cagcattcac gcgggtagca
     9781 gaagcgtgac gatgcagatc gttttccaac accaccaccg cgtcggcgcg tccggtttcc
     9841 agttcggtta acgcttcttc aagcgaaccg ccacccataa tgcccagccc catgctgttg
     9901 acggaacggg caatcatggt gataccgacg tcagcgccgc gacctttcag ggctttcgcg
     9961 acgttagccg ccgcctgaat cacctctaag ctaccggcgt tcgtcccgga gataatcaac
    10021 ggtttcttcg cacctgccag tgcctgcacg atgacgtcga ttttgctttg cagctcaggt
    10081 tcgataccgt caaccgctgg tgcagagtta tccagcgcat gggcgatggc aaaacctaaa
    10141 cgcgcctgat cttcaaccgg tgcgcggtaa gtccacgccg cgatatcatc cagacgggtg
    10201 tcatcaacgt tggtaacaaa cagcggatgc ttcgcacgtt gaccgatgtt aaggattgcc
    10261 gcaatctgcc agtcagccac tttctgtgct gccgccattt cgcgcgcttt acctttcacc
    10321 gcctgacgca ctgccagcgc gacgcgcgcg ccggtctggg taacgtcttc acccagcacc
    10381 agtaccgcat cgtaagattc gatttcgcgc agagccggag tataaatgcc gccttcacgc
    10441 agcactttca gcgccagttg cagacgttcc tgctcaccgt gagcgatacc ggtgtagaag
    10501 ttttcttcgc ccaccagttc acgcagtgca aagttgcttt ccacgctggc acgcggagaa
    10561 ccaataccga tcactttctt cgactgacgc agaatatctg ccgcgccctg cattgcctgt
    10621 tcggcgttga gggtaatgaa atcatcgcca cgacgctgta ctggctgacg cggacgatcc
    10681 ttcaggttga cgtaaccgta accgaaacga ccacggtcgc agaggaagta gtggtttacc
    10741 gtaccgttgt aacggttttc gatacgacgc agttcgccgt aacgttcacc ggggctgatg
    10801 ttacagccga tggaacattg ctggcagatg ctcggcgcaa actgcatatc ccatttacgg
    10861 ttgtaacgct cggagtgcgt tttgtcggta aatacgccgg tcgggcaaat ttcgaccagg
    10921 ttaccggaaa attcgctttc cagcgtgccg tcttccgggc gaccgaagta gacgttgtcg
    10981 tgcgcgccat aaacgcccag atctgtaccg tcagcgtaat ctttgtagta acgcacacag
    11041 cggtagcagg cgatgcagcg gttcatttcg tgagatatga atggccccaa atcctgatta
    11101 cggtgggtac gtttggtgaa acggtagcga cggaagctgt gtccggtcat cacggtcata
    11161 tcctgaagat ggcagttacc gccttcttca cataccggac agtcgtgcgg gtggttggtc
    11221 attaaccact cgaccacact ttcacggaac tgtttcgctt cttcgtcgtc aatggaaata
    11281 aaggtgccat cggaagccgg tgtcatacag gacatcacca ggcgaccacg cgtgtcttcc
    11341 gcgttttggt attgcttcac cgcacactgg cggcaagcac cgacgcttcc cagcgccgga
    11401 tgccagcaaa agtaaggaat atcaaggccc agagacagac aagcttccag caggttgtcc
    11461 gctccgttga cctcgtattc tttgccgtct acatgaattg tagccattag catgcttcca
    11521 gttttctcgg tcagggaccg agcgttaatc gaaattcggt taccagcgct ctttcagcag
    11581 gttcggctga atcccattaa tcaaatgggt attgctgaac ggctgtttga ttcccgcctc
    11641 aaattcttcg cggaaatatt tgatggcgct ctgtaacggc tccactgcac caggtgcgtg
    11701 ggcacagaaa gttttacccg ggcctaagaa tcgacacagt tgctcaagtg tttcaatatc
    11761 gcccggctgg ccttcgccac gctccagcgc acgcagaatt ttcacgctcc acggcagacc
    11821 gtcgcggcac ggcgtacacc agccgcagga ctcacgggcg aaaaactctt ccaggttacg
    11881 caccagcgac accatgttga tctcatggtc aaccgccatc gccagcgccg tacccagacg
    11941 gctgcccgct ttaccgatac tttcgaattc catcggcaga tcaaggtgcg cttcggtcag
    12001 gaagtcagtc cccgcgccgc ctggctgcca ggctttaaat ttcagaccat cacgcatacc
    12061 accggcgtaa tcttcgagga tctcgcgtgc ggtggtgccg aacggcagtt cccacagtcc
    12121 cggatttttc acccgaccgg agaagcccat cagcttggtg ccagcatctt tacttttcga
    12181 gatgttctga taccactcca cgccgttagc gaggatcgcc ggaacgttac acagggtttc
    12241 gacgttgttg acacaggtcg gtttgcccca tacgccggag gttgccggga aggggggttt
    12301 cgagcgtggg ttagcacgac gcccttctag ggagttgatt aacgctgttt cttccccgca
    12361 gatgtagcgc cctgccccgg tatggacgaa cagttcgaag tcgaaacctg ttcccataat
    12421 gtttttgcca agcaagcccg cttcagtggc ttcggcaatg gcgcggcgca gatttactgc
    12481 cgcttcgata tattcgccac gcaggaagat gtagccacgg taagctttca gcgcaaacgc
    12541 ggagatgagc ataccttcca ccagcaggtg cggcagttgc tccatcaaca ggcggtcttt
    12601 ataggtgccc ggctccattt catcggcgtt acacagcagg taacggatgt tcatggattc
    12661 gtctttcggc atcaggctcc acttcaggcc agtagaaaag cccgctccgc cgcgcccttt
    12721 cagaccagcg tcttttacct gattaacgat ttcgtccgga gacagcccgg tcagcgcctt
    12781 acgcgcccct tcgtaaccgt ttttgctgcg gtattcgtcc agccacactg gctgtttgtc
    12841 atcgcgcaga cgccaggtca gcggatgcgt ttcgggagta cggataatgt ttttcattta
    12901 taccgctcca gcagttcagg gatcgcttcc ggggtcagat gcgcgtgagt gtcctcatcg
    12961 atcatcatgt ttggcccttt atcacagttc cccaggcagc aagttggcag cagcgtaaag
    13021 cggccatcaa atgtcgtttg ccctggtttg atgttcagct ttttctcgag cgccgcctga
    13081 ataccctgat acccgttgat atgacagacc acgctgtcgc aataacggat cacatggcga
    13141 ccaaccggct ggcggaagat ctgactgtag aacgttgcca caccttcgac gtcgcttgcc
    13201 ggaataccca gcacatcggc gatcgcgtgg atcgcaccat ccggcaccca gccacgctgc
    13261 ttctgaacga ttttcagcgc ttcaatggac gccgcacgcg ggtcttcgta gtggtgcatc
    13321 tcgtgctcaa tcgcttcacg ctctgccgca ctcagctcaa aagcctcggt ttgtggttgt
    13381 tgattctcgt gcataattag cggtccacat ctgacataac aaaatcgata ctgcccagat
    13441 aaacaatcag gtcagacacc aggctgccgc ggatcgccgc cggaatttgc tgcaaatgcg
    13501 cataactcgg cgtgcggata cgagtgcgat aactcatggt gctaccgtcg ctggtcaggt
    13561 agtaactgtt gatccccttg gtcgcctcaa tcatctggaa agattcattg gcaggcatca
    13621 ccggccccca cgacacttgc aggaagtggg tgatcagggt ttcgatatgt tgcagcgtgc
    13681 gctctttcgg cggcggcgtg gtcagcgggt gatccgcttt gaacgggcct tccggcatgt
    13741 tgttgaggca ctgctcaaga atgcgcagac tctggcgcag ctcttccact ttcagcatta
    13801 cgcgggtgta gcagtcagaa acaccaccac caaccgggat ttcaaagtcg aagttttcat
    13861 agccagaata aggacgcgcc ttacgcacgt cgaagtcgat cccggtagca cgcaggcccg
    13921 cgccagtggt gccccactcc agcgcctctt tcgcgccata ggcggcaacg ccctgggaac
    13981 gacctttcag aatggtattt tgcagcgccg ctttctcgta agacgccaga cgtttcggca
    14041 tccagtcgag gaactcacgc agcaggcgat cccagccgcg cggcaggtcg tgcgctacgc
    14101 cgccaatacg gaaccacgcc gggtgcatac ggaaacccgt gatcgcttcc accagatcgt
    14161 aaattttctg acgatcggta aaggcgaaga acacgggcgt cattgcgccg acgtcctgaa
    14221 taaaggtcga gatgtacagc aggtggctgt tgatacggaa cagttcggag agcataacgc
    14281 gaatgacgtt aacgcgatcc ggcacggtga tcccggccag tttctctacc gccagcacgt
    14341 aaggcatttc gttaacgcag ccgccgaggt attcaatacg gtcggtatac ggaatgtagc
    14401 tgtgccagga ctggcgctcg cccattttct cagcaccacg gtggtggtag ccgatgtctg
    14461 gtacgcagtc gacaatctct tcgccgtcga gttgtaaaac gatacggaaa gccccgtgcg
    14521 ccgacgggtg gttcggaccg aggttgagga acatgaagtc ctcgttttcg gtgccgcgct
    14581 tcatccccca ctcttccggt ttgaaggtca gggcttccat ctccagatcc tgtttggctt
    14641 tggtcagctc aaacggcgag aattcggtag cgcgcgccgg gtaatcttta cgcagcgggt
    14701 gacctttcca ggtttgcggc atcatgatgc ggcgcaggtt cgggtgaccg tcgaaagtaa
    14761 tgccaaacag atcccaggtt tcacgctcat accagttagc gttcgggaac agtttggtga
    14821 aggtcggtac gtgcaggtcg ttttctgcca gcgccacctt cagcatgatg tcgcggttac
    14881 gatcgataga aatcagatgg tagaaaacgg aaaaatccgc ggcaggtaac ccttcgcggt
    14941 gtgtgcgcag acgttcgtcc atgccgtgta agtcaaacag catgacgtaa ggtttcggca
    15001 gtttctttaa gaaatcgcca acttccagta attgttcacg cttgatccac acaacgggaa
    15061 ccccggtgcg agtcgcctga acagtaaagg catccggccc aaaacggttg cgcagttcgc
    15121 caattaccgg atcatcaaga tgatcgcggg tctgccaggc gggttcttgc gcggttaagt
    15181 cggtcatatt gttcaccatt gcaaatggtc cgtggtgact gtcggcgcag taagcttcgc
    15241 gaaatagatt taggaataag cgaagaaaaa tccctttgcc gacaggcgca aattaaatct
    15301 cgtcaggtgt acgcaggttg gttacggcaa tgcgttcacc gcgcttgcgt tcgcgctctg
    15361 attgcatatt ggcgcgataa acgccctgat cgccaaccac ccaggagagc ggacgacgtt
    15421 ctttgccgat agattcctgc aacagcatca gtgcctgcat gtacgcttca ggacgcggcg
    15481 ggcagcccgg gatatacaca tcaaccggga tgaatttatc gacgccctgc acaacggaat
    15541 aaatatcgta cataccacca gagttggcac aggcacccat tgagataacc cattttggtt
    15601 ccagcatctg gtcatacaga cgctgaataa ccggtgccat tttggtaaag caggttcctg
    15661 caaccaccat caggtcagcc tgacgcggcg aagcacgcaa tacttctgcg ccaaaacgcg
    15721 ccacgtcatg caccgcggta aacgaagtca ccatctcaac gtaacagcag gaaagaccga
    15781 agttatacgg ccaaattgag tttttacgac cccagttaac catgtcattg agcttgccca
    15841 taaacacgtt tttgttaact tcttgctcca gagggtcggt tacgatctcc tgcttttgca
    15901 gggggtaacg gtcgttctca ccgttgggat ctatgcgggt gagcgtataa tccatcttaa
    15961 tgcctcgcgg ttagcgttga cgattagcga tactgttcgt ttccgggttc atacgctcgc
    16021 ggcgtgaacg cgcgggcgtc cagtccagcg cgccaatacg caccagataa accagacctg
    16081 ccagtaacac aaaaataaaa attgcagctt ccacaaagcc tacccagccg ctttcgcgga
    16141 tagaggttga ccatgcgaac agatacagcg cttcaacgtc gaagataacg aagaacatgg
    16201 ccaccagata aaacttggcg gacaggcgta agcgggcgga gccgaccgag tcgataccgg
    16261 attcaaacgg cacgtttttc gacctcgcgc gtgcgcgacc gcctaaaaac caaccaccta
    16321 ccagcattag gcaacacagg ccaatggcaa cgataagaaa gatagcgaat gcccagtgat
    16381 gagcgatgac ttcagtggat gttgacatac tcattgctta ctcatcaaaa gtagcgccag
    16441 attcactgct cttcacggca gatggacgcc acatcgattc atggggagga ataaaaaaaa
    16501 ccttacaatc actgtagaaa ttcttttata cagctaattg atgtggtctt ttactccttt
    16561 ctataacctt ttgtcaactt taacaaaagt ttcttcacat tagtttacat aatatcaaca
    16621 ccattagcat ttaatgccct ttcaccccag atccttgacg actccaggat aattagatgt
    16681 tgttgaatcg tgtccgttgt gaagcaatgg aaaaaatacg ggtctatttt gacaggaatt
    16741 tgtgtcgatt cctcccccca aaagagagta ttttcttgat ctgtgacacg cttttgtcat
    16801 tccataacaa aaacgcagca acaaatttac gtatttttta acatcattgt agcaggtgat
    16861 ttttttcagg cgattatttg tgcgttcggg acgtgaatct ctggtgatta aaaaatgaac
    16921 agttttgtac gttctgcact atgcgaggaa ggatttttac taaaaaaaag ccgctggggt
    16981 ttaaaacacc cccagcggct cgttttttac actattgtct caggaattat ctatcgtccg
    17041 tcgattactc gatatccctt tcaatcaaca atgaatcatc cccttccgga gcagacattg
    17101 ggctgtattg ccacggatta tggtagctct ccatcgcctg atagatcacc tgggccagct
    17161 cattattact ggacgggtca tagcacagca aatattcggt atcaggtagc ggcggtaagc
    17221 catctactcc actcagcaca cgcaggtccg ggctcatcat ctcaaccggc cttgccgtca
    17281 cgccaagacc ggctttcact gccgcacgaa cggccggaag cgtcgaggcg acataagcca
    17341 gtcgccatgg aatatctgct ttattaagcg ttgccagcac catatcgcga aacggacttg
    17401 gatcatccag caatacaaga gggatcggct cgcctttttg caatacgtat tccgctgcgc
    17461 agtaccagtg tgttggcgag gtacgcaggt tcaatgcctt aaacgctgaa ggacgatggg
    17521 tggttaccat caaatccact tcctgggatt ccagcatttc tgccatatag gcattacgtt
    17581 taacgcggac atccagcgct aatttcggat aaaccgaact cacgcgattt aacaggaaag
    17641 gtaagatcgt atcggcagat tcatctgaag caccgatagt taacacgccc tgaagattac
    17701 tgaacattaa tgatgagcag gcctcatcat taaaacgcag gattttcctg gcgtaaccaa
    17761 gaagttgaat gccatgttca gttaacagtt tgttgcgacc gtgacgagcg aacagttctt
    17821 tcccaacgag ttgttccaga cgctgcattt gctgacttac ggcggactga gtacgacaca
    17881 cagcggcagc tgcggcagca aaagtgttca gatcggcaac agcaacaaat gttctcagca
    17941 gatcgaggtc gaggttaatt atcggacgat ttgcacttat catatattat cacttactgg
    18001 cggctcatac tgagctggtt aatgctgtgc acacacaaac aagcaattcc atttgtaatg
    18061 tgcctccctg gcagtttcat ccggaacccg gacgaaagta aaaatgcata tgagttgcac
    18121 taaaaaagcg actcacattg ttccgttata atgcctgaag tagatcacag aatatatctt
    18181 cagggatcgc atatctatta agttactcac tcttttctat ttatgacatg cgcgtgtttg
    18241 tataaatgta aatgtgagtc cttgttccac tctcgtgcag catcgctggt catacgcgaa
    18301 cacgtacaaa cagcaatggt gaggcggcat caagagcagg gatccgtcat ttatgcgagc
    18361 attttacccc aaaaaccttt tatttataag ggccattgcg aatcatctga tgcaaagtta
    18421 tgttatgtta ggcaaagtaa tcttctatta ttaataagca catcaaaacc tttttgaata
    18481 ttaaataata attaattagc atcatcctca ttcattaatt ccgcttaaca atagtttcac
    18541 accttgcccc attacgacac ctcggaaatc atcacgctgt taaactctcc gtaatgcgga
    18601 aatatcatca tcgcgtttca ttagtgaatt cttaaatgag gcattttcac acaattatct
    18661 tacagataaa aaaaccagac ttacaattaa gaatcagaac aattcactat ataacattgc
    18721 atgtaaagca tatacacctc attattttgt catcattaag ttattaacag cacaatcgag
    18781 ccttcccctc tggcaaaatc ttattctgca gaccttcaaa acaccgtcct gggggagtac
    18841 attgttctaa gctgacttcc acggcaggga gtggcgataa cagcaaaaaa ggtcaagatt
    18901 catgtccccc attgaaaaat ccagcaaatt agagaatgtc tgttatgaca tccgtggtcc
    18961 ggtgctgaaa gaagcaaaac gcctggaaga agaaggtaac aaggtactga aactgaacat
    19021 cggcaaccca gccccgttcg gttttgacgc gccagatgaa atcctcgttg acgtgatacg
    19081 caacctgcct accgctcaag ggtattgcga ttccaaaggt ctttactccg cgcgtaaagc
    19141 catcatgcag cactaccagg ctcgtggcat gcgtgatgtt accgtggaag atatttacat
    19201 cggcaatggt gtatcggagc ttatcgttca ggcaatgcag gcattgctga acagcgggga
    19261 cgaaatgttg gttcctgcac cagattaccc actatggacc gcggcggttt cgctttccag
    19321 cggtaaagcg gtgcattatc tttgcgatga atcctctgac tggttcccgg acctcgatga
    19381 tattcgcgct aaaattacgc ctcgtacgcg tgggatcgtt attatcaacc caaataaccc
    19441 aaccggcgcg gtatattcca aagagctttt aatggagatt gtggagattg cacgtcagca
    19501 taatctcatt atcttcgccg atgaaattta tgacaaaatt ctttacgacg acgctgagca
    19561 tcactcaatt gcgccgctgg cacctgacct gctgaccatt acctttaacg gactgtcgaa
    19621 aacgtaccgc gttgcaggct tccgtcaggg gtggatggtg ttgaacgggc cgaaaaaaca
    19681 cgccaaaggc tacatcgaag gtctggaaat gctggcttca atgcgcctgt gtgctaacgt
    19741 tcctgcgcaa cacgccattc agaccgcgct gggtggttat cagagcatca gtgaatttat
    19801 tacccctggc ggtcgtcttt atgagcagcg taaccgcgcg tgggaactga tcaacgatat
    19861 tccgggcgtt tcctgcgtga aacctcgtgg tgcgctgtat atgttcccga aaatcgacgc
    19921 caaacgcttt aacattcacg acgatcagaa aatggtgctg gatttcctgt tgcaggaaaa
    19981 agttctgttg gtgcaaggga cggcattcaa ctggccgtgg ccggatcact tccgcattgt
    20041 cacgctaccg cgtgtcgatg atatcgagct gtctttgagc aagttcgcgc gtttcctttc
    20101 tggttatcat cagctgtaat cttaatttca ctgccggaga ttgcatccgg cagcgttatc
    20161 ccgccacaat gacctgatga tgtcatcata cgtaaggtca ctatgaaaca gagccatttt
    20221 tttgcccatc tctcccgcct gaaactcatt aaccgctggc cgctaatgcg caacgtgctg
    20281 acggaaaatg tgtccgaaca cagtttgcag gtagcgatgg tcgcccatgc gctggcagct
    20341 atcaaaaatc gaaaatttgg cggtaatgtc aacgccgaac gtatcgcttt actggcgatg
    20401 taccacgatg cctcagaagt gctcaccggc gatctcccta ctccggtgaa atacttcaat
    20461 tcgcaaatcg ctcaggagta caaggctatt gaaaaaatcg ctcagcaaaa actggtcgat
    20521 atggttccgg aagagctgcg ggatatcttt gcgccgttaa ttgacgagca tgcatatagc
    20581 gatgaagaaa aatcgctggt gaaacaggca gatgcactgt gtgcatatct gaaatgtctg
    20641 gaagaactcg cggccggaaa taatgaattc ttgctggcaa aaacgcgact ggaagcgacg
    20701 cttgaagcgc gtcgcagcca ggagatggac tacttcatgg aagtatttgt tcccagcttc
    20761 catctttcgc tcgatgagat tagccaggat tcaccgctgt aagcagccgg agtctgcgtc
    20821 gcatcaggca ataagcgccg gatgcgacat caggctcttg tcaaaacgga aacagcatcg
    20881 ggatcatcac cacacaaacc gccatcacga taatggtgaa cggtaccccc aacttcacaa
    20941 agtcactgaa gctgtaattt cccggaccta aaaccagtgt gttaacaggt gaagaaaccg
    21001 gtgtcataaa ggcggcggat gctgccatcg ccacgaccat cgcgaatgga taaggcgaca
    21061 cccccatcgt tttggcagca gccagcgcaa tcggagccat caacaccgcc gtcgcggtat
    21121 tagagataaa tagcccaata accgccgaca agacaaacaa acaccccagc atcatatgtg
    21181 gcccgtaacc accgccaatg tccatcagcc ctttcaccgc cagcgcgaca cctcccgttt
    21241 tctgtaatgc cacagcaaac ggcatcatcc caacgatcaa aataatgctc ggccagtgaa
    21301 tggatttata ggcgctttca gcatctatac agcggaattt ccccatcagc aggcaggcga
    21361 tgatagcggc aacaggatta ggaatttcat ctgtcagcat taacgccacc attagcacca
    21421 gacagaaaat ggcatggggt gcctggctgt gcgcgggcga tgcttcactc acctcttccg
    21481 gtaagttcag cgctacgaag tcgcggccct gtttggccag cataccgatc agtttccagt
    21541 tacccacaac caggatgata tcgcccagca gcagaggctc atccgccagc gaaccttcca
    21601 gcgccacgcc attgcgcttt agccccacca cattcagtcc gtagcgggta cgaaaaccaa
    21661 tttcgcgcac cgatttacca atcagttctg actcaggaat taatgaaatc tctgccatgc
    21721 ccacatcaag ggcctggtca gaaaaatact cgccgcgcag taccatcggc tccagcaatt
    21781 gctcactaca aaattgccgg agatcgacat cagccgcaga catatcaata agcaaaacgt
    21841 cacgcgcgcg aaattcagaa accccattaa cgttcacgat aacgcgacga aaacgccgcc
    21901 agcgttcaac accgatgacg ttagcgccat aacgctcacg taatttgaga tcatccagcc
    21961 gttgaccaat cattggcgat ccggggcgaa tagccagacg tcgcgcacgc ccggtcagtc
    22021 gatattcacg gataagatcg cgaaaggttc gacgcgtcca gccttcgcgc tgcggggtct
    22081 gggtatcccc tttcagcatg aaacgcatca ctaacatata caaaataccc agcaccagca
    22141 cgaccaggcc aacaggtgtt acgctaaaga aactgaagcc gtgatagcct tcacgcagca
    22201 attcactgtt gactaccagg ttcggcggcg tcgccaccag cgtcatcatg ccgctaatca
    22261 gcccggcaaa acttaacggc atcatcagac gtgacggcga agtttgcata cgcatggcaa
    22321 cgcttaacac cacgggaata aagatagcga caacgccggt tgaactcata aacgcgccaa
    22381 gccccgcgac ggtcagcatc aacaaaacca acattttgat ttcactgttg cccgccactt
    22441 tgaccagcca tgttcccatt acggtggcaa caccggtacg gaccaaacca tcgccaataa
    22501 taaacaaggc ggcaatcagg acaacgttag gatcagaaaa gccggaaaat acttcgggga
    22561 ccgtcagcgt tccgcttaat gcaaacgcga caataacaaa caaagcgacc gcatccatac
    22621 gcactctgcc cgtcgcaaac aagacgatgg caacggccag taatgaaaga acccaaatca
    22681 attcaccgtt cacaacttat ccttgttaat tgagggggat gacttgattc tgccataaaa
    22741 aagccccgac gagacggggc taaatcatga tcaggtgttt cactgaataa taacatcgcc
    22801 atttagctgt ttggtcacag taatttgctc cagactgtgg aggaccaaat cgacctcatt
    22861 caggcgcggg gtatctgccg gagcgttaac cgcaatgaca tggcaacccg ccgccaggcc
    22921 agaaagcacg ccagcgggag catcttccgc caccacacac tcctgcggcg caagccccag
    22981 cagctgcgca cctaacagat acgcatcagg ttctggtttt ccgcgcttca ctcgctcagc
    23041 ggttacaaac acctttggtg cgggaagccc agctatttta tggcgcgctc gcgctaccgg
    23101 catggagcca gaagtcacaa tggcccacgg aatacctgct ttattcaaat gattgagtaa
    23161 ggcgattgcc cccggaagcg cggtaatacc ttcggtttcc gtggcctcga tgtgctccag
    23221 acacgtaaac tcggcggcaa tatcagcctc ggatttgccc gccataaaat ggcgcaaaga
    23281 ggtgatcgcc tgtttaccgt gaatgaaagc cagcacctct tccggcgcta acccatgacg
    23341 tctggcccag ttgctccacg cccgttctac cgcaggcagg gaatccacca gcgttccatc
    23401 aagatcaaac agaaaacctt tgcaccgcac gcgggcctcc tcaggcgttg ataatttgat
    23461 taatttcgtt ggcgctcaaa tggtactgac gcaggcaggc atgccacaca ttaagcatgc
    23521 gctgatattt ttcccacatt ggcgtctggg cgttaaaacc atgagtccca gcgtcaaaat
    23581 gggtatagcg cccttccaca ttaaccataa agcggacata accgaggtaa cgtgcttcag
    23641 tggcggcgtc aaagccgagg aaggtgacac gacgttcatc gatggattgc tggtcctgca
    23701 aattagacca ggaaacatgc aacgcatgat acatctccat aatgtcgatg atagtgcggc
    23761 aggtttcttc tttcagctcg ccaaactcgc gatccaattc acgcatctgt aatccgtaac
    23821 cacgctcaat aattgtttgc aggcgacggt aacgttcagc atttgccgga tcgagcatag
    23881 tcatcatctt gtactgatta gacaaaataa gacgttgcgc gttggtcatt tccattgttg
    23941 actcctgtat cactctacta cggtgaaaaa aaaagaaggc tgagtatgcc ttcttttata
    24001 tgcgtaatca ggggtcaatt acaaatcatc aaggaaagtt ttatccagtt gtttgaaggc
    24061 gcgcttaagc gtgtcagcta atgcctggta atcaggcttg ccttcaacgg gtgccaacac
    24121 ctgtccagac tcctgcaatt taccgcgaac ttcataaaac cagttgagga tagcaggggg
    24181 taatggcgtt acagaacgct tgcccagcca ccataatccc tgcatgggta aacttaaggc
    24241 gaacagcgca gtggcaactg ccggcccaag ctgaccgccc agggcaatct gccagcagag
    24301 agtaaatacg gcgatcggcg gcataaaacg gatcgcataa cgcgtcatct tgataacgcg
    24361 attttcgaca aagaccgggg caaggcgttt ttccagcggc cacgtctttg agtaatgctg
    24421 tccccggcga aacaagctaa aaaaattaac agaacgatta tccggcgttg acatgcttca
    24481 cctcaacttc acatataaag attcaaaaat ttgtgcaaat tcacaactca gcgggacaac
    24541 attcaaaaca ttttgtcttc catacccact atcaggtatc ctttagcagc ctgaaggcct
    24601 aagtagtaca tattcattga gtcgtcaaat tcatatacat tatgccattg gctgaaaatt
    24661 acgcaaaatg gcatagactc aagatatttc ttccatcatg caaaaaaaat ttgcagtgca
    24721 tgatgttaat cataaatgtc ggtgtcatca tgcgctacgc tctatggctc cctgacgttt
    24781 ttttagccac gtatcaatta taggtacttc catgtcgagt aagttagtac tggttctgaa
    24841 ctgcggtagt tcttcactga aatttgccat catcgatgca gtaaatggtg aagagtacct
    24901 ttctggttta gccgaatgtt tccacctgcc cgaagcacgt atcaaatgga aaatggacgg
    24961 caataaacag gaagcggctt taggtgcagg cgccgctcac agcgaagcgc tcaactttat
    25021 cgttaatact attctggcac aaaaaccaga actgtctgcg cagctgactg ctatcggtca
    25081 ccgtatcgta cacggcggcg aaaagtatac cagctccgta gtgatcgatg agtctgttat
    25141 tcagggtatc aaagatgcag cttcttttgc accgctacac aacccggctc acctgatcgg
    25201 tatcgaagaa gctctgaaat ctttcccaca gctgaaagac aaaaacgttg ctgtatttga
    25261 caccgcgttc caccagacta tgccggaaga gtcttacctc tacgccctgc cttacaacct
    25321 gtacaaagag cacggcatcc gtcgttacgg cgcgcacggc accagccact tctatgtaac
    25381 ccaggaagcg gcaaaaatgc tgaacaaacc ggtagaagaa ctgaacatca tcacctgcca
    25441 cctgggcaac ggtggttccg tttctgctat ccgcaacggt aaatgcgttg acacctctat
    25501 gggcctgacc ccgctggaag gtctggtcat gggtacccgt tctggtgata tcgatccggc
    25561 gatcatcttc cacctgcacg acaccctggg catgagcgtt gacgcaatca acaaactgct
    25621 gaccaaagag tctggcctgc tgggtctgac cgaagtgacc agcgactgcc gctatgttga
    25681 agacaactac gcgacgaaag aagacgcgaa gcgcgcaatg gacgtttact gccaccgcct
    25741 ggcgaaatac atcggtgcct acactgcgct gatggatggt cgtctggacg ctgttgtatt
    25801 cactggtggt atcggtgaaa atgccgcgat ggttcgtgaa ctgtctctgg gcaaactggg
    25861 cgtgctgggc tttgaagttg atcatgaacg caacctggct gcacgtttcg gcaaatctgg
    25921 tttcatcaac aaagaaggta cccgtcctgc ggtggttatc ccaaccaacg aagaactggt
    25981 tatcgcgcaa gacgcgagcc gcctgactgc ctgatttcac accgccagct cagctggcgg
    26041 tgctgttttg taacccgcca aatcggcggt aacgaaagag gataaaccgt gtcccgtatt
    26101 attatgctga tccctaccgg aaccagcgtc ggtctgacca gcgtcagcct tggcgtgatc
    26161 cgtgcaatgg aacgcaaagg cgttcgtctg agcgttttca aacctatcgc tcagccgcgt
    26221 accggtggcg atgcgcccga tcagactacg actatcgtgc gtgcgaactc ttccaccacg
    26281 acggccgctg aaccgctgaa aatgagctac gttgaaggtc tgctttccag caatcagaaa
    26341 gatgtgctga tggaagagat cgtcgcaaac taccacgcta acaccaaaga cgctgaagtc
    26401 gttctggttg aaggtctggt cccgacacgt aagcaccagt ttgcccagtc tctgaactac
    26461 gaaatcgcta aaacgctgaa tgcggaaatc gtcttcgtta tgtctcaggg cactgacacc
    26521 ccggaacagc tgaaagagcg tatcgaactg acccgcaaca gcttcggcgg tgccaaaaac
    26581 accaacatca ccggcgttat cgttaacaaa ctgaacgcac cggttgatga acagggtcgt
    26641 actcgcccgg atctgtccga gattttcgac gactcttcca aagctaaagt aaacaatgtt
    26701 gatccggcga agctgcaaga atccagcccg ctgccggttc tcggcgctgt gccgtggagc
    26761 tttgacctga tcgcgactcg tgcgatcgat atggctcgcc acctgaatgc gaccatcatc
    26821 aacgaaggcg acatcaatac tcgccgcgtt aaatccgtca ctttctgcgc acgcagcatt
    26881 ccgcacatgc tggagcactt ccgtgccggt tctctgctgg tgacttccgc agaccgtcct
    26941 gacgtgctgg tcgccgcttg cctggcagcc atgaacggcg tagaaatcgg tgccctgctg
    27001 ctgactggcg gctacgaaat ggacgcgcgc atttctaaac tgtgcgaacg tgctttcgct
    27061 accggcctgc cggtatttat ggtgaacacc aacacctggc agacctctct gagcctgcag
    27121 agcttcaacc aggaagttcc ggttgacgat cacgaacgta tcgagaaagt tcaggaatac
    27181 gttgctaact acatcaacgc tgactggatc gaatctctga ctgccacttc tgagcgcagc
    27241 cgtcgtctgt ctccgcctgc gttccgttat cagctgactg aacttgcgcg caaagcgggc
    27301 aaacgtatcg tactgccgga aggtgacgaa ccgcgtaccg ttaaagcagc cgctatctgt
    27361 gctgaacgtg gtatcgcaac ttgcgtactg ctgggtaatc cggcagagat caaccgtgtt
    27421 gcagcgtctc agggtgtaga actgggtgca gggattgaaa tcgttgatcc agaagtggtt
    27481 cgcgaaagct atgttggtcg tctggtcgaa ctgcgtaaga acaaaggcat gaccgaaacc
    27541 gttgcccgcg aacagctgga agacaacgtg gtgctcggta cgctgatgct ggaacaggat
    27601 gaagttgatg gtctggtttc cggtgctgtt cacactaccg caaacaccat ccgtccgccg
    27661 ctgcagctga tcaaaactgc accgggcagc tccctggtat cttccgtgtt cttcatgctg
    27721 ctgccggaac aggtttacgt ttacggtgac tgtgcgatca acccggatcc gaccgctgaa
    27781 cagctggcag aaatcgcgat tcagtccgct gattccgctg cggccttcgg tatcgaaccg
    27841 cgcgttgcta tgctctccta ctccaccggt acttctggtg caggtagcga cgtagaaaag
    27901 gttcgcgaag caactcgtct ggcgcaggaa aaacgtcctg acctgatgat cgacggtccg
    27961 ctgcagtacg acgctgcggt aatggctgac gttgcgaaat ccaaagcgcc gaactctccg
    28021 gttgcaggtc gcgctaccgt gtttatcttc ccggatctga acaccggtaa caccacctac
    28081 aaagcggtac agcgttctgc cgacctgatc tccatcgggc cgatgctgca gggtatgcgc
    28141 aagccggtta acgacctgtc ccgtggcgca ctggttgacg atatcgtcta caccatcgcg
    28201 ctgactgcga ttcagtctgc acagcagcag taatctcgtc atcatccgca gctttgcgct
    28261 gcggatatct gaaccggaaa taatcactat ttccggtttt ttattctctt aatctgcatt
    28321 aatcctttct gattatcttg cttaactgcg ctgcatcaat gaattgcgcc atttcacttt
    28381 gcatacttac cactttgttt tgtgcaaggg aatatttgcg ctatgtccgc aatcactgaa
    28441 tccaaaccaa caagaagatg ggcaatgccc gatacgttgg tgattatctt ttttgttgct
    28501 attttaacca gccttgccac ctgggtagtt ccggtgggga tgtttgacag tcaggaagtg
    28561 cagtatcagg ttgatggtca aacaaaaaca cgcaaagtcg tagatccaca ctcatttcgc
    28621 attctgacta acgaagcagg cgaacctgag tatcaccgcg tacagctgtt cacgacgggc
    28681 gatgaacgcc cgggcctgat gaacttcccg tttgaaggat taacctcagg atcgaaatac
    28741 gggacagctg ttggcatcat catgtttatg ctggtgattg gcggcgcgtt tggcattgtg
    28801 atgcgtacag gaaccattga taacggtatc ctggcgctta ttcgccatac ccgcgggaat
    28861 gaaattctct ttattcctgc gctgtttatt ctgttttcac ttggcggcgc ggtatttggt
    28921 atgggagaag aggccgtcgc ctttgccatt atcatcgcac cgctaatggt ccggctgggc
    28981 tatgacagta ttaccaccgt cctggtgacc tatattgcca cgcaaatcgg ttttgccagt
    29041 tcgtggatga acccgttttg tgtggtcgtt gctcagggga ttgccggcgt tccggtgctt
    29101 tctggctccg ggttgcgcat cgtggtgtgg gttatcgcca ctatgattgg cctgatcttt
    29161 accatggtgt acgcctcacg agtgaaaaag aatcctcttc tgtcacgcgt gcatgagtcc
    29221 gaccgcttct ttcgtgaaaa gcaggcggat gttgaacaac gtccgtttac ctttggtgac
    29281 tggctggtat tgattgtcct gaccgccgta atggtctggg tgatttgggg cgtgatcgtt
    29341 aatgcctggt ttattccaga aattgccagc cagttcttca ccatgggtct ggtgattggc
    29401 atcatcggcg ttgtttcccg ccttaacggc atgacggtta ataccatggc ttcatccttt
    29461 accgaagggg cgcgaatgat gatcgcccct gccctgctgg tgggtttcgc caaagggatt
    29521 ttgctgctgg tcggtaatgg tgaagcgggt gatgccagcg tgttaaatac catcctcaac
    29581 agcattgcca atgccattag cggtctggac aacgcggtcg cggcctggtt tatgttgctc
    29641 ttccaggcgg tatttaattt cttcgtgacg tccggttctg gtcaggcggc gttaaccatg
    29701 ccgttactgg caccgcttgg cgatctggtc ggtgttaacc gtcaggttac cgtgctggca
    29761 ttccagtttg gtgatggctt cagtcacatc atttacccaa cctcagcttc gttaatggca
    29821 actctcggtg tgtgcagggt ggacttccgt aactggctga aggtgggcgc gaccctactt
    29881 ggactgctgt ttattatgtc cagcgtcgta gtgatcggcg ctcagttgat gggctaccac
    29941 taaaaatgtt aagagccgca attgcggctc ttttttcatt ctgccgtttc agtctctacg
    30001 gcttcatttt tggcattgcg cttcatccac aacgccagcg ctttcagcga gtctggagtg
    30061 aactcatcgc agcgtgcggt gatttcttcc ggcgtcagcc agcaaacttc actgacttca
    30121 tcttcctgta gggcgaaggg accgtgagag acgcagctga acaacgcgcc ccagacacgg
    30181 caatttttat cttcgaaata gaactgcccg tgctcggcaa aggggacacc ggcaatgccc
    30241 aactcttctt ccgcttcgcg acgcgcggat tccagcagtt gctcatcggc ctgaaccaca
    30301 ccgcctgcgg tcgcatctaa catgccgggt aaaaagtctt ttgtctcggt acgacgctgg
    30361 accagaattt tgcccatgcc atcatgcacg acgatgtaag ttgcacgatg acgcagacac
    30421 tgtgcccgca tttgttcccg gctggcttgt gcaatgactt cgttctcttc attgacaata
    30481 tccacccatt cagtacttgc caaacgacgc tgttccatta tcaggaaacc ttctttttct
    30541 ggcgctctta cggcgcattt tgagttgtgg gtaaattacg gattaatcgc gacctgcgca
    30601 atgatacttt gatcattgag tgcgattaca ctaagtacgt cattatccag catgccataa
    30661 ctcgccggat taccgccttt cggaatactc accgagccgg ggttgaagtg gaaaatctcc
    30721 ccccgctgtt ctgccactgg cagatgggta tgaccgtaca ccagcacatc gttctggttt
    30781 aaagcaggta gattttccgg gccaaaaaga tgaccatgcg tcaaaaacag acgttgtttt
    30841 tccagtaata cctgttgcca cggcgcggtt atcgggaaat gcagcagcat ttgatccact
    30901 tcgctgtcgc agttgccgcg cacagcgata accttatgtg ccacttcatt aagccgttca
    30961 gcgactttgg ctggcgcgta accctccggt aaagcattac gcgggccgtg attcaacacg
    31021 tcgccaagga tcaccagcca ctgggcaccg ctttgggcaa acaactccag aacacgttcc
    31081 gtcgccggta acgacccatg aatgtccgat gcaaacatca gtttcatcac tcactcctcg
    31141 tcgaaaaaac gtaagctatg atactggatt ctgtcgttgc tatcagccag attgcttcgc
    31201 cgaaagtgca ataaaacgct ggacagacgc tcgctgccac tggaatgtcg cataatccac
    31261 caggcgttct ggcacctcat cgccatgtag taccaggcgg ttaatcatta gcgccagatc
    31321 agtatcagca atgcaccatt caccaaataa attcggctga cccagtgcta acaaatgttc
    31381 tgccatcgcg acactggctt ttccctcggc cgttagtggc gcttttttcg cccccgcaaa
    31441 gacaacatcc gtcggacgct cttcgcggat gggcatcaga tcgctgcgca gccaggcctg
    31501 aatctgtcgt gcacgcgcac gattttctaa atcaagcgga taaatacgtt cccaggtcgg
    31561 tggcgcaaat cgatcttcca gatactccgc aatggcagaa gattcactca actcaaaatc
    31621 atcgatttgt aataacggca cacggcgtgt ctgaccgtaa ccttgccacg tcggctgcaa
    31681 atgttcaccg ctgtcgaggt cgatggtctt gatatgaaac gacaggcctt tttcctgcaa
    31741 cgccacccaa gcggataaca cataagggga gaaaaagtgg gcatctgacc aaagcgtgat
    31801 agcgggttta ctcattatgt cctcggcaat aaaggaggct ggctatcaaa ctatagagcc
    31861 tttttgtcac tgtcacgtga cgaatactca cgtaagtcgc cgcgctttct atacttgtgg
    31921 tgttcagatg attaaacaac cggagctgca atgatcgatc tctatttcgc cccgacaccc
    31981 aatggtcaca aaattacgct gtttctcgaa gaagcagagc ttgattatcg cttgattaag
    32041 gtagacctgg ggaaaggcgg tcagtttcgt ccggaatttt tgcgcatttc gcccaacaac
    32101 aaaattccgg caattgttga tcattctcct gccgatggcg gcgaaccgct aagcctcttt
    32161 gaatctggtg ccattttgtt gtatctggct gagaaaacgg ggctcttttt gagtcatgaa
    32221 acgcgtgaac gcgccgccac attacagtgg ttattctggc aggtaggcga actggggccg
    32281 atgcttgggc aaaatcatca ttttaatcac gcagcccccc aaaccattcc ttacgctatt
    32341 gaacgttatc aggttgaaac tcagcgtctt taccatgtac taaacaagcg gctggaaaac
    32401 tcgccctggc tgggaggcga gaactacagc attgcggata ttgcctgctg gccgtgggtt
    32461 aatgcctgga ctcgccagcg aattgacctc gcaatgtatc cggcagtcaa gaactggcat
    32521 gagcggatcc gttcgcgccc tgccaccggg caggcactgc taaaagcaca actcggtgat
    32581 gagcgttcgg atagttaaca gaaacaggtt ctcgtgtatt atttcatcct aagtaaaaca
    32641 acggagaacc tgcaatggca caacctgccg ctattattcg tataaagaac cttcgtttac
    32701 gtacgtttat cggaattaag gaagaagaaa ttaacaaccg tcaggatatt gttatcaatg
    32761 tgacgatcca ctaccccgcc gataaagcgc gcactagcga agatatcaac gatgcgctga
    32821 attatcgcac cgtaacgaaa aacattattc agcatgtaga gaataaccgt ttctctttgt
    32881 tggaaaaatt aactcaggat gtgctcgata tcgcacgtga acatcactgg gtgacgtatg
    32941 ctgaagtgga gatcgataaa ctgcacgcgc tgcgctacgc cgattcggta tccatgacct
    33001 taagctggca gcgttaaccg ccatatcggg aggctgcatg aacatagtga tcaccggagg
    33061 gacgggatta attggtcgcc atttgattcc gcgtttgctg gagctgggcc atcaaatcac
    33121 ggtagtgacg cgtaacccac agaaagccag ttccgttctc ggccctcggg tgacgctatg
    33181 gcaagggcta gccgatcaaa gcaacctcaa cggcgttgat gcggtaatca acctggccgg
    33241 agaaccgatt gctgataaac gctggactca cgagcaaaaa gagcgtctct gccaaagccg
    33301 ctggaatatc acgcaaaaac tggtcgattt gattaatgcc agcgacacgc cgccgtcggt
    33361 actcatttcc ggctcggcaa cgggctatta tggcgactta ggtgaagtgg tggttaccga
    33421 agaggaaccg ccgcataacg aatttactca taaactctgc gcccgctggg aagagattgc
    33481 ctgccgggcg caaagtgaca aaacgcgagt gtgcctgctg cgaaccggcg tggtactggc
    33541 accggacggc ggtattctcg gtaaaatgct gccaccgttt cgtcttggcc tgggcgggcc
    33601 gattgactct ggtcggcagt atctggcctg gattcatatt gatgatatgg tcaacggtat
    33661 tctctggctg ctggataacg agctgcgcgg gccatttaat atggtttcgc cctacccggt
    33721 acgcaatgaa caatttgccc atgcgctcgg tcacgcgctg catcgcccgg ccattttgcg
    33781 cgtccccgcg accgccattc gactgttaat gggcgaatct tcagtactgg tattaggtgg
    33841 acaacgcgcg ctgcctaaac ggctggaaga agcgggtttt gcgtttcgct ggtacgattt
    33901 agaagaggcg ctggcggatg tcgttcgctg atgtggttta cagcaaacat ccgccagtta
    33961 actcccggtg ttacaggatt agtggctttg cgcgataaga tcgtctggtg aaagtcgggt
    34021 caccatcata actaactctc tgtctaaacc tctatccagc atctcctgag caatacgcag
    34081 ggcttcttcg tgtttgccct gcattgcgcc ttcttcacgt aatctgtcag caatggtcat
    34141 cagtttctcc ttttcttgtg gtgcgcgttc cgctatctca ccaataaatg cacgaaaacg
    34201 ctgggcatcc cctgtttgta atacgtaatt aaacagggct tttagctgtc tgtcattagt
    34261 gttccctgta actagcagcg aaacaatttg gtcgactaat cccaacagat cgcgctgacg
    34321 aatatgtttc tgaattaact ccaacagcgc cattttgcgg tgttgcataa tctcgtcatc
    34381 cggcaccacg gtaatatcca ccaacggaaa cgctgatgaa tatattttgc gggctatagc
    34441 aggctcggca aattcatcaa gccagcagag tgaataagga taaggacttc tgcaaccatg
    34501 ataaaacagc atcgggatca ccaatggaag ctctttatag cccg
//
LOCUS       DADMIB010000026        34160 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.026, whole genome shotgun sequence.
ACCESSION   DADMIB010000026 DADMIB010000000
VERSION     DADMIB010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34160
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.026"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(312..524)
                     /gene="rpmE"
                     /locus_tag="JNZ89_001195"
     CDS             complement(312..524)
                     /gene="rpmE"
                     /locus_tag="JNZ89_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HAY8935126.1"
                     /translation="MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFF
                     TGKQRDVATGGRVDRFNKRFNIPGSK"
     gene            727..2925
                     /gene="priA"
                     /locus_tag="JNZ89_001196"
     CDS             727..2925
                     /gene="priA"
                     /locus_tag="JNZ89_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HAY8935127.1"
                     /translation="MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG
                     VVVSVSDVSELPLNELKAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI
                     LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF
                     NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS
                     AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
                     HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR
                     YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL
                     DLKGQKVQAGLAPALITRMRQHLQANNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
                     YYTLHQAQQHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPMFPGVPIS
                     RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA
                     DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE
                     RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADDKLWILGPVPALAPK
                     RGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRKVKWVLDVDPIEG"
     gene            3081..4106
                     /gene="cytR"
                     /locus_tag="JNZ89_001197"
     CDS             3081..4106
                     /gene="cytR"
                     /locus_tag="JNZ89_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CytR"
                     /protein_id="HAY8935128.1"
                     /translation="MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRV
                     EKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLI
                     GDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
                     LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVD
                     PQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLS
                     IIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIR
                     GSTRALP"
     gene            4198..5157
                     /gene="ftsN"
                     /locus_tag="JNZ89_001198"
     CDS             4198..5157
                     /gene="ftsN"
                     /locus_tag="JNZ89_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HAY8935129.1"
                     /translation="MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVL
                     VTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEP
                     SAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQ
                     QLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPAHTT
                     AQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK
                     ITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG"
     gene            5250..5780
                     /gene="hslV"
                     /locus_tag="JNZ89_001199"
     CDS             5250..5780
                     /gene="hslV"
                     /locus_tag="JNZ89_001199"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HAY8935130.1"
                     /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
                     AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
                     ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDIC
                     IYTNHFHTIEELSYKA"
     gene            5790..7121
                     /gene="hslU"
                     /locus_tag="JNZ89_001200"
     CDS             5790..7121
                     /gene="hslU"
                     /locus_tag="JNZ89_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HAY8935131.1"
                     /translation="MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEEL
                     RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFR
                     KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKI
                     KDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG
                     VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQA
                     LTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGA
                     RRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL"
     gene            7188..8114
                     /gene="menA"
                     /locus_tag="JNZ89_001201"
     CDS             7188..8114
                     /gene="menA"
                     /locus_tag="JNZ89_001201"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HAY8935132.1"
                     /translation="MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPL
                     VALLALITAGLLQILSNLANDYGDAVKGSDRPDRIGPLRGMQKGVITQQEMKRALIIT
                     VVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLV
                     FFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVV
                     RLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDP
                     VAMRPMLERTVKGALLTNLLFILGIFLSQWAA"
     gene            8207..8692
                     /gene="rraA"
                     /locus_tag="JNZ89_001202"
     CDS             8207..8692
                     /gene="rraA"
                     /locus_tag="JNZ89_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HAY8935133.1"
                     /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFED
                     NGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDL
                     EELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
                     E"
     gene            complement(8777..9022)
                     /gene="zapB"
                     /locus_tag="JNZ89_001203"
     CDS             complement(8777..9022)
                     /gene="zapB"
                     /locus_tag="JNZ89_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring assembly protein ZapB"
                     /protein_id="HAY8935134.1"
                     /translation="MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQ
                     NAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV"
     gene            9448..10293
                     /gene="glpF"
                     /locus_tag="JNZ89_001204"
     CDS             9448..10293
                     /gene="glpF"
                     /locus_tag="JNZ89_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol uptake facilitator protein GlpF"
                     /protein_id="HAY8935135.1"
                     /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEI
                     SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAA
                     LVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM
                     GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAG
                     WGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVKEKETTTPSE
                     QKASL"
     gene            10316..11824
                     /gene="glpK"
                     /locus_tag="JNZ89_001205"
     CDS             10316..11824
                     /gene="glpK"
                     /locus_tag="JNZ89_001205"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HAY8935136.1"
                     /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG
                     WVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAI
                     VWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRSE
                     LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEV
                     RRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT
                     GEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFA
                     TKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV
                     LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
                     AVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE"
     gene            11959..12969
                     /gene="glpX"
                     /locus_tag="JNZ89_001206"
     CDS             11959..12969
                     /gene="glpX"
                     /locus_tag="JNZ89_001206"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HAY8935137.1"
                     /translation="MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIML
                     NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALA
                     VLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVT
                     ILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
                     AVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSD
                     NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVH
                     IL"
     gene            13066..13812
                     /gene="fpr"
                     /locus_tag="JNZ89_001207"
     CDS             13066..13812
                     /gene="fpr"
                     /locus_tag="JNZ89_001207"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HAY8935138.1"
                     /translation="MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEID
                     GERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDE
                     VPDCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEK
                     RYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESAIGLPMNKETSHVMLCGNPQMV
                     RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
     gene            complement(13817..14245)
                     /gene="uspD"
                     /locus_tag="JNZ89_001208"
     CDS             complement(13817..14245)
                     /gene="uspD"
                     /locus_tag="JNZ89_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspD"
                     /protein_id="HAY8935139.1"
                     /translation="MAYKHIDVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLS
                     ELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKE
                     QCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK"
     gene            complement(14272..14571)
                     /locus_tag="JNZ89_001209"
     CDS             complement(14272..14571)
                     /locus_tag="JNZ89_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 domain-containing protein"
                     /protein_id="HAY8935140.1"
                     /translation="MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFM
                     TKLKELAAAASSVDEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA"
     gene            complement(14783..15223)
                     /locus_tag="JNZ89_001210"
     CDS             complement(14783..15223)
                     /locus_tag="JNZ89_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY8935141.1"
                     /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDI
                     QTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVG
                     CFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN"
     gene            15324..15923
                     /locus_tag="JNZ89_001211"
     CDS             15324..15923
                     /locus_tag="JNZ89_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiQ family protein"
                     /protein_id="HAY8935142.1"
                     /translation="MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDL
                     SISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIK
                     SIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
                     TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK"
     gene            16031..16798
                     /gene="tpiA"
                     /locus_tag="JNZ89_001212"
     CDS             16031..16798
                     /gene="tpiA"
                     /locus_tag="JNZ89_001212"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HAY8935143.1"
                     /translation="MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE
                     MYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYH
                     KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE
                     GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNA
                     AELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA"
     gene            complement(16853..17608)
                     /gene="cdh"
                     /locus_tag="JNZ89_001213"
     CDS             complement(16853..17608)
                     /gene="cdh"
                     /locus_tag="JNZ89_001213"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HAY8935144.1"
                     /translation="MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLP
                     NQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFW
                     LAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLAN
                     ISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQS
                     DNSFVLLATQRNLLTLNRASAEEIQDHQCEILR"
     gene            complement(17715..18704)
                     /locus_tag="JNZ89_001214"
     CDS             complement(17715..18704)
                     /locus_tag="JNZ89_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8935145.1"
                     /translation="MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFS
                     AHWKQQTGDNVVMRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWI
                     KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
                     GYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
                     ANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAK
                     NYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR"
     gene            complement(19024..19986)
                     /gene="pfkA"
                     /locus_tag="JNZ89_001215"
     CDS             complement(19024..19986)
                     /gene="pfkA"
                     /locus_tag="JNZ89_001215"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HAY8935146.1"
                     /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLG
                     LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
                     GDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS
                     HQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAI
                     VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
                     LAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY"
     gene            complement(20167..21069)
                     /gene="fieF"
                     /locus_tag="JNZ89_001216"
     CDS             complement(20167..21069)
                     /gene="fieF"
                     /locus_tag="JNZ89_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312867.1"
                     /note="FieF, a metal efflux transporter, is a member of
                     the CDF (cation diffusion facilitator) family of
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter FieF"
                     /protein_id="HAY8935147.1"
                     /translation="MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALV
                     DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGI
                     QHLISPTPMIDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMM
                     NGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEI
                     IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP
                     GSDVIIHQDPCSVVPREGKRSMLS"
     gene            complement(21217..21729)
                     /gene="cpxP"
                     /locus_tag="JNZ89_001217"
     CDS             complement(21217..21729)
                     /gene="cpxP"
                     /locus_tag="JNZ89_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-envelope stress modulator CpxP"
                     /protein_id="HAY8935148.1"
                     /translation="MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQRS
                     TQSHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQ
                     AEKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLK
                     LLSSSNSRSQ"
     gene            21879..22577
                     /gene="cpxR"
                     /locus_tag="JNZ89_001218"
     CDS             21879..22577
                     /gene="cpxR"
                     /locus_tag="JNZ89_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response regulator transcription
                     factor CpxR"
                     /protein_id="HAY8935149.1"
                     /translation="MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDS
                     IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF
                     NDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGT
                     EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWF
                     KTLRGRGYLMVSAS"
     gene            22574..23947
                     /gene="cpxA"
                     /locus_tag="JNZ89_001219"
     CDS             22574..23947
                     /gene="cpxA"
                     /locus_tag="JNZ89_001219"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HAY8935150.1"
                     /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR
                     QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEM
                     QIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
                     FDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
                     LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER
                     IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTV
                     NFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVS
                     PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
                     LPLYKRS"
     gene            complement(24053..24727)
                     /gene="yiiM"
                     /locus_tag="JNZ89_001220"
     CDS             complement(24053..24727)
                     /gene="yiiM"
                     /locus_tag="JNZ89_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418346.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein"
                     /protein_id="HAY8935151.1"
                     /translation="MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQ
                     AEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGD
                     IFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPL
                     ELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFS
                     RRLWGK"
     gene            complement(24876..25841)
                     /gene="kdgT"
                     /locus_tag="JNZ89_001221"
     CDS             complement(24876..25841)
                     /gene="kdgT"
                     /locus_tag="JNZ89_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate transporter"
                     /protein_id="HAY8935152.1"
                     /translation="MRKSRGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVSI
                     LAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAG
                     LSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASF
                     EPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGL
                     LGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPMLIAEMVPAFKP
                     MAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK"
     gene            complement(26120..26740)
                     /gene="sodA"
                     /locus_tag="JNZ89_001222"
     CDS             complement(26120..26740)
                     /gene="sodA"
                     /locus_tag="JNZ89_001222"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010345169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HAY8935153.1"
                     /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE
                     SLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA
                     IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS
                     GFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
     gene            27024..28058
                     /gene="rhaT"
                     /locus_tag="JNZ89_001223"
     CDS             27024..28058
                     /gene="rhaT"
                     /locus_tag="JNZ89_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HAY8935154.1"
                     /translation="MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIV
                     SWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG
                     IGIAIGITLIVGTLMTPIINGNFDVLLNTEGGRMTLLGVLVALIGVGIVTRAGQLKER
                     KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV
                     IIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFY
                     AWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVA
                     ANIVGIGMAN"
     gene            complement(28055..28993)
                     /gene="rhaR"
                     /locus_tag="JNZ89_001224"
     CDS             complement(28055..28993)
                     /gene="rhaR"
                     /locus_tag="JNZ89_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709710.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaR"
                     /protein_id="HAY8935155.1"
                     /translation="MAFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFA
                     SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD
                     KHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVI
                     GQLEHESSQHVSFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAAS
                     LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD
                     ISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD"
     gene            complement(28977..29813)
                     /gene="rhaS"
                     /locus_tag="JNZ89_001225"
     CDS             complement(28977..29813)
                     /gene="rhaS"
                     /locus_tag="JNZ89_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaS"
                     /protein_id="HAY8935156.1"
                     /translation="MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHG
                     TGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLL
                     PQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKS
                     SLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQR
                     YLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGF
                     LQ"
     gene            30101..31513
                     /gene="rhaB"
                     /locus_tag="JNZ89_001226"
     CDS             30101..31513
                     /gene="rhaB"
                     /locus_tag="JNZ89_001226"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HAY8935157.1"
                     /translation="MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHS
                     QNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAY
                     RDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
                     PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIG
                     HWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA
                     LAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINP
                     NDDRFINPEAMCSEIQAACRETAQPIPESDAELAQLRGEDFSQLHIVGGGCQNTLLNQ
                     LCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDS
                     EIAHYVAQLHSTRQTKELCA"
     gene            31510..32769
                     /gene="rhaA"
                     /locus_tag="JNZ89_001227"
     CDS             31510..32769
                     /gene="rhaA"
                     /locus_tag="JNZ89_001227"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HAY8935158.1"
                     /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD
                     VSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESD
                     TPVSRDQIKPEHFKNWGEWAKANQLGLDFNPSCFSHPLSADGFTLSHPDDSIRQFWID
                     HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISKKLNP
                     AHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAA
                     MLYVPQLLLHVSRPVRWDCDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINR
                     IAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYC
                     QRHDTPAGSEWLESVRAYEKEILSQRG"
     gene            33036..33860
                     /gene="rhaD"
                     /locus_tag="JNZ89_001228"
     CDS             33036..33860
                     /gene="rhaD"
                     /locus_tag="JNZ89_001228"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HAY8935159.1"
                     /translation="MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAP
                     YKDNVHAQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGY
                     HILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAV
                     FTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSG
                     STLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL"
     gene            33870..>34160
                     /gene="rhaM"
                     /locus_tag="JNZ89_001229"
     CDS             33870..>34160
                     /gene="rhaM"
                     /locus_tag="JNZ89_001229"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HAY8935160.1"
                     /translation="MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIY
                     LDKARNLLFATVEIESEERWNAVASADVCQRWWKYMTDVMPANPDNSPVSSEL"
BASE COUNT         8370 a         8913 c         8869 g         8008 t
ORIGIN      
        1 ggattgaccg gatggccgga cgtcaccccg ccggggcaca ctgaacaggc cacgccggtg
       61 ggagcaccaa tgcgcacccc ggctgaaccc tgaacaatgc taccgccata ctgcgtcatg
      121 tcgccctgac gcgccgccgg ttttccgctc atcgtaaaat ccttttgaaa taaataagaa
      181 ccagaagcct agcgccagtc aacaacagga aatgataatg agttaacacc ccggaatttt
      241 tcagaattta taaaaggcaa aattcaggca caaaaaaagc gccgtgcggc gcttttttcg
      301 gaaatccggt cttatttgct gcccgggatg ttgaaacgct tgttgaagcg gtcaacacgg
      361 ccaccggtag caacatcacg ctgtttgcca gtgaagaacg ggtggcactt gctgcacacg
      421 tcgaggttca ggtcatgacc aacagtggag cggattttca ttacgttacc gcaagagcag
      481 ctagcagtaa tttcttcgta tttcgggtga atatcttttt tcatgggaaa acctcggttt
      541 aaggccgcgt cgctcttcca gccctaacgc cagacaccac gcgatgttaa aagtatagct
      601 tcaatacgat catttcgtac gaaggcgcga aatcatacag aaattaacca acgtatgcaa
      661 actgatccgc actcttctac ggcaatgtgt atactaaccc accgaatttc aagtcaggat
      721 gatgctatgc ccgttgccca cgttgccttg cccgttccgc ttcctcgtac ctttgactat
      781 ctgctgccag aaggcatgac ggttaaagcc gggtgtcgcg tgcgcgtgcc gtttggcaaa
      841 cagcaggagc gcatcggggt tgtggtgtca gttagcgatg tcagtgagct gccgcttaac
      901 gagctgaaag cggtagtgga agtgctggac gttgagccgg tatttactca ctccgtctgg
      961 cggttactgc tctgggcggc agattactat catcatccga ttggcgatgt gctgtttcat
     1021 gccttgccga ttttactgcg ccaggggcgg cctgcggcga acgcgccgat gtggtactgg
     1081 tttgccactg aacaaggcca ggcggtggat ctgaacagcc tgaaacgctc ccccaagcaa
     1141 caacaggcgc tggcggcgtt acggcaaggc aaaatctggc gcgaccaggt cgccacgctc
     1201 gaatttaatg atgccgcgtt gcaggcgcta cgcaaaaaag gtctgtgtga tttagcaagt
     1261 gaaacaccag agtttagcga ctggcgaacg aactatgccg tttctggtga gcggttgcga
     1321 ttgaataccg aacaggccac cgccgttggc gcaattcata gcgcggcaga tactttttct
     1381 gcctggctgc tggcgggcgt taccggttcc ggtaaaacgg aggtttatct cagtgtactg
     1441 gaaaacgtgc tcgctcaggg caaacaggcg ctggtgatgg tgccggaaat cggcctgaca
     1501 ccgcaaacta tcgcccgttt tcgtgaacgt tttaatgccc ccgtggaagt tctgcattcc
     1561 ggcctgaacg acagcgagcg gctttctgcg tggttgaaag cgaaaaatgg cgaggcggcg
     1621 attgtgatcg gcacccgctc cgcgctgttt acgccgttta aaaatctcgg cgtgattgtc
     1681 attgatgaag agcacgacag ctcctacaag cagcaggaag gctggcgcta tcatgcccgc
     1741 gacctggcgg tgtatcgtgc gcacagcgag caaatcccga ttattcttgg ctccgcaacg
     1801 cccgcgctgg aaacgttatg caacgtccag cagaaaaaat accgcctgct gcgcctgacc
     1861 cgtcgggcag ggaatgctcg tccggcaatt caacatgtgc tggatttaaa aggtcagaag
     1921 gtgcaggcag gtctggctcc ggcgttaatc acccgtatgc gccagcattt acaggccaac
     1981 aatcaggtta tcctctttct taatcgtcgg ggttttgcgc ctgcgctgct gtgccacgac
     2041 tgcggctgga tagccgaatg cccacgttgc gatcactact acacgctgca tcaggcgcaa
     2101 cagcatttgc gctgtcacca ctgtgacagt cagcgtccgg tgccgcgcca gtgcccttcc
     2161 tgcggttcca cgcacctggt ccccgtgggg ctgggcaccg aacagcttga acagacgctt
     2221 gcgccgatgt tccccggcgt gcccatttca cgtatcgacc gcgataccac cagccgcaaa
     2281 ggggcactgg aacagcaact ggcggaagtg catcgcggcg gcgcgaggat tttgatcggc
     2341 acacaaatgc tggcgaaagg tcaccacttt ccggatgtga cgctggtggc gttactggat
     2401 gtggacggcg cgctgttttc tgccgatttt cgctcggcag aacgtttcgc ccagctttac
     2461 acccaggtcg ccggtcgtgc cgggcgtgcg ggtaaacagg gcgaagtggt gctgcaaacg
     2521 caccatccgg aacatcctct gttgcaaacg ttgctctata aaggctacga cgcctttgcc
     2581 gaacaggcgc tggctgagcg acgcatgatg cagctgccgc cgtggaccag ccatgtgatt
     2641 gtgcgtgcgg aagatcataa caatcagcac gcgccgctgt tcctgcaaca actgcgtaat
     2701 ctgatccttt ccagcccgct ggcagacgac aaactgtgga ttctcggccc ggttccggct
     2761 ctggcaccta agcgtggtgg ccgctggcgc tggcagatct tgttgcagca cccttcccgc
     2821 gtgcgcttgc aacacatcat tagtggtacg ctggcgctta ttaatacaat accggattcc
     2881 cgcaaggtga aatgggtgtt ggatgtcgat cccatcgaag gctaatgcgc aaacgttgcg
     2941 aggcggatcg aaaaattcaa tattcatcac acttttcatg aaaattctgt aaccgttttc
     3001 acgcgctatc tgctaaaaat gttgccgatg tgaagtaaac atggatgtag tacgcctgac
     3061 gtaccaggcg aggagtgagt gtgaaagcga agaagcagga aactgccgcg accatgaaag
     3121 acgttgccct caaggcaaaa gtctctacag cgactgtctc ccgagcatta atgaatcccg
     3181 ataaagtctc ccaggccacc cgtaatcggg ttgaaaaagc ggcccgggaa gtgggttatt
     3241 taccgcagcc tatggggcgc aacgtcaagc gtaatgaatc ccgcaccatt ctggtgattg
     3301 tcccggatat ctgcgatccc ttctttagcg aaattattcg cggtatcgaa gttacggcgg
     3361 caaatcacgg atatctggtg ctgattggcg actgtgcgca tcaaaatcag caggaaaaaa
     3421 cctttatcga tttgatcatc accaagcaaa ttgatggcat gttgctgctg ggttcaaggc
     3481 tgccgtttga tgccagcatt gaggaacagc gtaatctgcc gccgatggtg atggcgaacg
     3541 aatttgcacc ggaactggag ctgcctaccg ttcatatcga caatctgacc gccgcatttg
     3601 atgcagtaaa ttatttatat gagcaagggc ataaacggat tggctgtata gccggtcccg
     3661 aagagatgcc actgtgtcac taccgcctgc aaggctatgt tcaggcgctg cgtcgctgcg
     3721 gaattatggt tgatccacaa tacatcgccc gtggcgactt caccttcgaa gccggaagca
     3781 aagcaatgca acagctgctt gatcttccac aaccgcctac tgcagtcttc tgccatagcg
     3841 atgtgatggc gctcggcgca ctttctcagg caaaacgcca ggggctgaaa gtcccggaag
     3901 acctttccat aatcggtttt gataacatcg acctgacgca attttgtgat ccgccgctga
     3961 caaccatcgc gcagccgcgt tacgaaatcg gtcgggaagc tatgctgtta ttgcttgatc
     4021 aaatgcaggg gcaacacgtt ggcagtggct ctcgtttaat ggactgcgaa cttatcatcc
     4081 ggggatcaac acgcgcgtta ccttaaagta aacctttaag actgccgtga ctggtcaaag
     4141 gcccgccgct taagtaacat ggcgggctga cgaacgaata aatacagcga aacgatagtg
     4201 gcacaacgag attatgtacg ccgcagccaa ccggcacctt cgcggcgaaa aaagagcacc
     4261 tcacggaaaa agcaacgaaa tctgcctgcg gtttctcccg ctatggtcgc tattgctgcc
     4321 gccgttcttg tgacctttat cggtggtctg tacttcatta cgcatcacaa gaaagaagag
     4381 tccgagacgc tgcaaagcca gaaagtgacc ggaaacggac taccaccaaa accagaagaa
     4441 cgctggcgct acattaaaga gctggaaagt cgccagccgg gtgtgcgtgc gcccacagaa
     4501 ccttctgccg gtggtgaagt gaaaacgccg gagcaactga caccagaaca acgtcagctt
     4561 cttgaacaaa tgcaggctga tatgcgccag cagccaacgc agctggttga ggttccgtgg
     4621 aatgaacaga cgccggaaca gcgtcagcaa acgctacaac gccagcgtca ggcgcagcaa
     4681 ttagcggagc agcaacgcct ggctcagcag tcgcgtacga ctgaacaaag ctggcagcag
     4741 cagacgcgta cgtcgcaagc cgcgccggta caggcgcaac cgcgccagtc taaaccagct
     4801 tctactcagc agccgtacca ggatctgctg caaacccctg cgcacacgac cgcgcagtcg
     4861 aagccgcagc aagctgcacc ggttgctcgt gccgctgacg cgccaaaacc gacggcggag
     4921 aaaaaagacg aacgccgctg gatggtgcag tgcggttcgt tcagaggcgc ggaacaggca
     4981 gagacggtac gtgctcagct ggcgttcgaa ggatttgact cgaaaatcac caccaacaat
     5041 ggctggaatc gtgtggtcat tggcccggtg aaaggcaaag agaacgcaga cagcaccctc
     5101 aatcggttga agatggcggg tcatacaaac tgcattcggc tcgccgccgg gggttgaaac
     5161 cctcaaaatc ccccccatct ataattgcat tatgcctcgt acttttgtac ggggtttgta
     5221 ctctgtattc gtaaccaagg ggtcagctcg tgacaactat agtaagcgta cgccgtaacg
     5281 gccatgtggt catcgctggt gatggtcagg ccacgttggg caataccgta atgaaaggca
     5341 acgtgaaaaa ggtccgccgt ctgtacaacg acaaagtcat cgcgggcttt gcgggcggta
     5401 ctgcggatgc ttttacgctg ttcgaactgt ttgaacgtaa actggaaatg catcagggcc
     5461 atctggttaa agccgccgtt gagctggcaa aagactggcg taccgatcgc atgctgcgca
     5521 aacttgaagc actgctggca gtcgcggatg aaactgcatc gcttatcatc accggtaacg
     5581 gtgacgtggt gcagccagaa aacgatctta ttgctatcgg ctccggcggc ccttacgccc
     5641 aggctgcggc gcgcgcgctg ttagaaaaca ctgaacttag cgcccgtgaa attgctgaaa
     5701 aggcgttgga tattgcaggc gacatttgca tctataccaa ccatttccac accatcgaag
     5761 aattaagcta caaagcgtaa ggatctccca tgtctgaaat gaccccacgc gaaatcgtca
     5821 gcgaactgga taagcacatc atcggccagg acaacgccaa gcgttctgtg gcgattgctc
     5881 tgcgtaaccg ctggcgtcgc atgcagctca acgaagagct gcgccatgaa gtgaccccga
     5941 aaaatatcct gatgatcggc ccgaccggtg tcggtaaaac tgaaatcgcc cgtcgtctgg
     6001 ctaagctggc gaatgcgccg ttcatcaaag ttgaagcgac caaattcacc gaagtgggct
     6061 atgtcggtaa ggaagtggat tctattattc gcgatctgac cgatgccgcc gtgaaaatgg
     6121 tacgcgtcca ggctatcgag aaaaaccgtt atcgcgctga agaactggca gaagaacgta
     6181 ttctcgacgt gctgatccca cctgctaaaa acaactgggg acagaccgaa cagcagcagg
     6241 aaccgtccgc tgctcgtcag gcattccgca aaaaactgcg tgaaggccag cttgatgaca
     6301 aagaaatcga gatcgatctt gccgcagcac cgatgggcgt tgaaattatg gctcctccag
     6361 gcatggaaga gatgaccagc cagctgcagt ccatgttcca gaacctgggc ggccagaagc
     6421 aaaaagcgcg taagctgaaa atcaaagacg ccatgaagct gctgattgaa gaagaagcgg
     6481 cgaaactggt gaacccggaa gagctgaagc aagacgctat cgacgctgtt gagcagcacg
     6541 ggatcgtgtt tatcgacgaa atcgacaaaa tctgtaagcg cggcgagtct tccggtccgg
     6601 atgtttctcg tgaaggcgtt cagcgtgacc tgctgccgct ggtagaaggt tgcaccgttt
     6661 ccaccaaaca cgggatggtc aaaactgacc acattctgtt tatcgcttct ggcgcgttcc
     6721 agattgcgaa accgtctgac ctaatcccgg aactgcaagg tcgtctgcca atccgcgttg
     6781 aactgcaggc actgaccacc agcgacttcg agcgtattct gaccgagccg aatgcctcta
     6841 tcaccgtgca gtacaaagca ctgatggcga ctgaaggcgt aaatatcgag tttaccgact
     6901 ccggtattaa acgcatcgcg gaagcggcat ggcaggtgaa cgaatctacc gaaaacatcg
     6961 gtgctcgtcg tttacacact gttctggagc gtttaatgga agagatttcc tacgacgcca
     7021 gcgatttaag cggtcaaaat atcactattg acgcagatta tgtgagcaaa catctggatg
     7081 cgttggtggc agatgaagat ctgagccgtt ttatcctata atcgcgttca atcattttca
     7141 tcattgtttg atggggctga aaggccccat ttttattggc gcgtattatg actgaacaac
     7201 aaattagccg aactcaggcg tggctggaaa gtttacgacc taaaaccctc cccctcgcct
     7261 ttgctgcaat tatcgtcggg acggcgctgg catggtggca aggtcatttt gatccgctgg
     7321 tcgccctgct ggcactgatt accgccgggc tattacagat cctttctaac ctcgccaatg
     7381 attacggcga tgcggtaaaa ggcagcgata gacctgaccg cattgggccg ctacgcggca
     7441 tgcaaaaagg ggtcattacc cagcaagaga tgaaacgggc gctcattatt accgtcgtgc
     7501 tcatctgtct ctccgggctg gcactggttg cagtggcgtg ccatacgctg gctgattttg
     7561 tcggtttcct gattcttggc gggttgtcga tcattgccgc tatcacctac accgtgggca
     7621 atcgtcctta tggttatatc ggtctggggg atatttccgt actggttttc tttggctggt
     7681 taagcgtcat ggggagctgg tatttacagg ctcatacatt gattccggca ctgatccttc
     7741 cggcgaccgc atgcggcctg ctggcaacgg cagtactgaa cattaataac ctgcgtgata
     7801 tcaatagcga ccgagaaaac ggcaaaaaca cgctggtggt gcgcttaggt gaagtgaacg
     7861 cgcgtcgtta tcatgcctgc ctgctgatgg gctctctggt atgtctggcg ctgtttaatc
     7921 tcttttcgct gcatagcctg tggggctggc tgttcctgct ggcggcaccg ttgctggtga
     7981 agcaagcccg ttatgtgatg cgggaaatgg acccggtggc gatgcgaccg atgctggaac
     8041 gcactgtcaa gggggcgtta ctgactaacc tgctgtttat tttagggata ttcctaagcc
     8101 agtgggcagc ataactgaca aatatcaatt aacaattgat gattttgcca acagcccaca
     8161 tagcgcgata tactgaaaat tctcgcagca actgaatgtt aagcctatga aatacgatac
     8221 ttccgagctt tgtgacatct atcaagaaga tgttaacgtc gtggaaccgc tgttctccaa
     8281 ctttggcgga cgggcgtcgt ttggcggaca aataatcacg gtaaaatgtt tcgaggacaa
     8341 cgggttgctg tacgatctgc tcgaacagaa tggccgtggt cgtgttcttg tcgtcgatgg
     8401 cggtggttct gttcgtcgcg cactggtcga tgctgaactg gcgcgtctgg cagtacaaaa
     8461 tgaatgggaa ggtctggtta tttacggcgc ggtgcgtcag gtagatgacc tggaagagtt
     8521 ggatatcggc atccaggcga tggcggcaat tccggttggt gccgctggcg aaggcattgg
     8581 cgaaagcgat gtccgcgtca attttggcgg tgtaaccttc ttctccggcg accatcttta
     8641 tgccgacaat accgggatta ttctttcaga agatccgctg gatattgaat gataagaaag
     8701 gcaccgcaag gtgccttttt tctgcgttac ctgttggcct acacagtaaa gaaattacgc
     8761 gaaagatgaa gcgtaatcag acctcttcca tgcgacccag cagggcctgc agacgttcct
     8821 gccagccgtt ctgctgttct ttcagatggt tgttctcacg ctccagctct tcgcgctgat
     8881 gctgggcatt ttgaacttcc tgcgacagtg agttgttttt ttctttcagc tcttcgattt
     8941 ccatctgcaa cagagtgatg gtatcaatcg cctgctgtac ttttgcttcc agtttctcaa
     9001 acacttctaa tgacattgtc atacctctcc tgaattgcaa ggcgttgatg gataaaaaat
     9061 cctcgtcccg attaccggtg acgccttaat aaatacgagc gcactttagt tagctccgat
     9121 tgtatgaagc cgcgccatcg ctgtccagcg gcacgccttg cagattacgg tttgccacac
     9181 ttttcatcct tctcctggtg acataatcca catcaatcga aaatgttaat aaatttgttg
     9241 cgcgaatgat ctaacaaaca tgcatcatgt acaatcagat ggaataaatg gcgcgataac
     9301 gctcatttta tgacgaagca cacacatttt aagttcgata tttctcgttt ttgctcgtta
     9361 acgataagtt tacagcatgc ctacaagcat cgtggaggtc cgtgactttc acgcatacaa
     9421 caaacattaa ctcttcagga tccgattatg agtcaaacat caaccttgaa aggccagtgc
     9481 attgctgaat tcctcggtac cgggttgttg atttttttcg gtgtgggttg cgttgcagca
     9541 ctaaaagtcg ctggtgcgtc ttttggtcag tgggaaatca gtgtcatttg gggactgggg
     9601 gtggcaatgg ctatctacct gaccgcaggg gtttccggcg cgcatcttaa tcccgctgtt
     9661 accattgcat tgtggctgtt tgcctgtttc gacaagcgca aagttattcc ttttatcgtt
     9721 tcacaagttg ccggcgcttt ctgtgctgcg gctttagttt acgggcttta ctacaattta
     9781 tttttcgact tcgagcagac tcatcacatt gttcgcggca gcgttgaaag tgttgatctg
     9841 gcaggcactt tctctactta ccctaatcct catatcaatt ttgtgcaggc tttcgcagtt
     9901 gagatggtga ttaccgctat tctgatgggg ctgatcctgg cgttaacgga cgatggcaac
     9961 ggtgtaccac gcggcccttt ggctcccttg ctgattggtc tactgattgc ggtcattggc
    10021 gcatctatgg gcccattgac gggttttgcc atgaacccag cgcgtgactt cggtccgaaa
    10081 gtctttgcct ggctggcggg ctggggcaat gtcgccttta ccggcggcag agacattcct
    10141 tacttcctgg tgccgctttt tggccctatc gttggcgcga ttgtaggtgc atttgcctac
    10201 cgcaaactga ttggtcgcca tttgccttgc gatatctgtg ttgtgaaaga aaaggaaacc
    10261 acaactcctt cagaacaaaa agcttcgctg taatatgact acgggacaat taaacatgac
    10321 tgaaaaaaaa tatatcgttg cgctcgacca gggcaccacc agctcccgcg cggtcgtaat
    10381 ggatcacgat gccaatatca ttagcgtgtc gcagcgcgaa tttgagcaaa tctacccaaa
    10441 accaggttgg gtagaacacg acccaatgga aatctgggcc acccaaagct ccacgctggt
    10501 agaagtgctg gcgaaagccg atatcagttc cgatcaaatt gcagctatcg gtattacgaa
    10561 ccagcgtgaa accactattg tctgggaaaa agaaaccggc aagcctatct ataacgccat
    10621 tgtctggcag tgccgtcgta ccgcagaaat ctgcgagcat ttaaaacgtg acggtttaga
    10681 agattatatc cgcagcaata ccggtctggt gattgacccg tacttttctg gcaccaaagt
    10741 gaagtggatc ctcgaccatg tggaaggctc tcgcgagcgt gcacgtcgta gtgaattgct
    10801 gtttggtacg gttgatacgt ggcttatctg gaaaatgact cagggccgtg tccatgtgac
    10861 cgattacacc aacgcctctc gtaccatgtt gttcaacatc cataccctgg actgggacga
    10921 caaaatgctg gaagtgctgg atattccgcg cgagatgctg ccagaagtgc gtcgttcttc
    10981 cgaagtatac ggtcagacta acattggcgg caaaggcggc acgcgtattc caatctccgg
    11041 gatcgccggt gaccagcagg ccgcgctgtt tggtcagttg tgcgtgaaag aagggatggc
    11101 gaagaacacc tatggcactg gctgctttat gctgatgaac actggcgaga aagcggtgaa
    11161 atcagaaaac ggcctgctga ccaccatcgc ctgcggcccg actggcgaag tgaactatgc
    11221 gttggaaggt gcggtgttta tggcaggcgc atccattcag tggctgcgcg atgagatgaa
    11281 gttgattaac gacgcctacg attccgaata tttcgccacc aaagtgcaaa acaccaatgg
    11341 tgtgtatgtg gttccggcat ttaccgggct gggtgcgccg tactgggacc cgtatgcgcg
    11401 cggggcgatt ttcggtctga ctcgtggggt gaacgctaac cacattatac gcgcgacgct
    11461 ggagtctatt gcttatcaga cgcgtgacgt gctggaagcg atgcaggccg actctggtat
    11521 ccgtctgcac gccctgcgcg tggatggtgg cgcagtagca aacaatttcc tgatgcagtt
    11581 ccagtccgat attctcggca cccgtgttga gcgcccggaa gtgcgcgaag tcaccgcatt
    11641 gggtgcggcc tatctcgcag gcctggcggt tggcttctgg cagaacctcg acgagctgca
    11701 agagaaagcg gtgattgagc gcgagttccg tccaggcatc gaaaccactg agcgtaatta
    11761 ccgttacgca ggctggaaaa aagcggtcaa acgcgcgatg gcgtgggaag aacacgacga
    11821 gtaatgtaaa tgccggatga agcgtttatg ccgcatccgg tagtcctgaa acgtgcgggg
    11881 gcaaccccgc acacatcaat aatcccaccc ttcccctgtg ctacacttcg cgccattcct
    11941 tactgcttag agtttgctat gagacgagaa cttgccatcg aattttcccg cgtcaccgaa
    12001 tctgcggcgc tggctggcta caaatggtta ggacgcggcg ataaaaacac cgcggacggc
    12061 gcggcggtaa acgccatgcg tattatgctc aaccaggtca acattgacgg caccatcgtc
    12121 attggtgaag gtgaaatcga cgaagcaccg atgctctaca ttggtgaaaa agtcggtact
    12181 ggtcgcggcg acgcggtaga tattgctgtt gatccgattg aaggcacgcg catgacggcg
    12241 atgggccagg ctaacgcgct ggcggtgctg gcagtaggcg ataaaggctg cttcctcaat
    12301 gcgccggata tgtatatgga gaagctgatt gtcgggccgg gagccaaagg caccattgat
    12361 ctgaacctgc cgctggcgga taacctgcgc aatgtagcgg cggcgctcgg caaaccgttg
    12421 agcgaactga cggtaacgat tctagctaaa ccacgccacg atgccgttat cgctgaaatg
    12481 cagcaactcg gcgtacgcgt atttgctatt ccggatggcg acgttgcggc ctcaattctc
    12541 acctgtatgc cagacagcga agttgacgtg ctgtacggta ttggtggcgc gccggaaggc
    12601 gtagtttctg cggcggtgat ccgcgcatta gatggcgaca tgaacggtcg tctgctggcg
    12661 cgtcatgacg tcaaaggcga caacgaagag aatcgtcgca ttggcgagca ggagctggca
    12721 cgctgcaaag cgatgggcat cgaagccggt aaagtattgc gcctgggcga tatggcgcgc
    12781 agcgataacg tcatcttctc tgccaccggt attaccaaag gcgatctgct ggaaggcatt
    12841 agccgcaaag gcaatatcgc gactaccgaa acgctgctga tccgcggcaa gtcacgcacc
    12901 attcgccgca ttcagtccat ccactatctg gatcgcaaag acccggaaat gcaggtgcac
    12961 atcctctgat tgatttgatc gattgagcct tccagtcctt cgggactgga atttttttgt
    13021 tcggagaacg aagataaggc aagtcaatca aaacaggaga aaaacatggc tgattgggta
    13081 acaggcaaag tcactaaagt gcagaactgg accgacgccc tgtttagtct caccgttcac
    13141 gcccccgtgc ttccgtttac cgccgggcaa ttcaccaagc ttggccttga aatcgacggc
    13201 gaacgcgtcc agcgcgccta ctcctatgtt aactcgcccg ataatcccga tctggagttt
    13261 tacctggtca ccgtccccga tggcaaatta agcccacgat tggcggcact gaaaccaggc
    13321 gatgaagtgc aggtggttag cgaagcagct ggcttctttg ttctggatga agtaccagat
    13381 tgcgaaacgc tatggatgct ggcaaccggt acagcgattg gcccttattt atcgattctg
    13441 caactaggca aagatttaga tcgcttcaaa aatctggtcc tggttcacgc cgcacgttat
    13501 gccgccgact taagctattt gccactgatg caagaactgg aaaaacgcta cgaaggcaaa
    13561 ctgcgcattc agacggtggt cagtcgggaa acggcagcgg ggtcgctcac cggacggata
    13621 ccggcattaa ttgaaagtgg ggaactggaa agcgcgattg gcctgccgat gaataaagaa
    13681 accagccatg tgatgctgtg cggcaatcca cagatggtgc gcgatacaca acagttgctg
    13741 aaagagaccc ggcagatgac gaaacattta cgtcgccgac cgggccatat gacagcggag
    13801 cattactggt aagcggttac ttatcgataa acggcacgat gagcaaatcc gcactcatct
    13861 tattgatcat cccgcgatat gctggcatca aacggttgat aaatgagtga tgatgaccac
    13921 agacaaggag gtcgcactgc tctttttgca taatttccag cagtgtttcc ggcatttctc
    13981 cgcgttcaat acgcagtttt gtcttcggcc attgaatatt tttcgtcagt ttatacagct
    14041 tgttatccga cttattcttc aacaattgaa gaatatcttc tgttgcaggg aagtagatac
    14101 ccggatacaa ctcgcttaag ccatcatcaa tatgaattaa cgtcaggtga gcgtcattat
    14161 gtctggcgag ctccagagct ttattcacca gtaaggcatc ttcttcattc ccggaaattg
    14221 ccacgtcaat gtgtttataa gccatgttta actccttcta aagcaactcc atcaagctaa
    14281 cgaacgcagt gataactcaa aaataatcat ctcggcctgg catgagaaag tgaaggccgc
    14341 atcaagctca acttgcccct ccagatcctt aatcttgtag gccacgctgg ccccttcatc
    14401 tacagaggat gcagcggcgg caagctcttt cagtttggtc ataaaagact ctgcttcttc
    14461 gcgggtggca aaaaagcgcg aaaacttact ggtacagttg tcgttatcaa tcaccgtacc
    14521 gatatcaatc gcacatcctt tagtactgca tttatctacg acatctttca tagggcacct
    14581 ctgtatattc gcctctctgt cgattacgac ttaagaataa tgcgccgtta agggaagaac
    14641 aaacaagtaa tgatcttatg gattaccatt ttttttgata ttgcttaagg tgaagagttc
    14701 agaaggattt tccgggtatt gtcatttgca tcgtggaaat aacaatcccg gaaaaaaata
    14761 gcagtaagag atatattaaa ggttaattac ttgatttatt gtcggcttta tacttcacat
    14821 cctgagtatc tttaccatat ttattttcgc cttgtgtgcc aacaaacgca ccaagatcga
    14881 taagcatcat caccagaatc aacgtcggga caaaacaccc caccgcccat tgccagacac
    14941 ccggtaaaat cgcccagtta cccgccagca gcatccacgc cacaatcatc agaaatgccc
    15001 atgcgccgga acgcccgcga tcatgcaagc gcttaacagt tactgccgct gttggccaaa
    15061 gcaagcacac aaggcaaaac gccgcggtct gaatatcgag taaattttta cccgccagtg
    15121 agaaaagcac cagcatgcct gcgaaccaca ggcctatcca aatccagaaa tcacggcgtc
    15181 caatacgccc tttaaatgag aataaccatt gctgtatggt catgtaagtt ccttgatggt
    15241 tgtcttttcc aggattctac ccttttgaca agggcgacag atatcgtttt aatcggagcc
    15301 agtcataaca aaaggtactg tcaatgaagc cagggtgtac gctgtttttt ctcttatgtt
    15361 ctgcattaac cgttacaaca acggcgcatg cacaaacacc agatacggca acgaccgcgc
    15421 cttatctgct ggctggagcc cctactttcg atctctccat cagccagttt cgagaagact
    15481 ttaacagcca gaatcctagc ctgccactga acgaatttcg tgccatcgac agcagtcccg
    15541 acaaagccaa tctcactcgt gctgcaagta aaattaacga gaacttgtat gcttctacag
    15601 cgctggagcg cggtacctta aaaatcaaaa gcattcaaat gacctggcta cccatccagg
    15661 ggccagagca aaaagcagcg aaagcgaaag ctcaggaata catggcagca gtgatccgca
    15721 cactcacccc attaatgacc aaaacacaaa gccagaaaaa actgcagtcg ctgctaacgg
    15781 cggggaaaaa caaacgttat tacaccgaga cagaaggtgc actgcgttat gttgtcgcgg
    15841 acaacggcga aaaggggctg accttcgctg ttgaaccgat taagctggcg ctatctgaat
    15901 cgcttgaagg tttgaataaa tgacaaaaag caaagccttt gtgccgatga atctctatac
    15961 tgtttcacag acctgctgcc ctgcggggcg gccatcttcc tttattcgct tataagcgtg
    16021 gagaattaaa atgcgacatc ctttagtgat gggtaactgg aaactgaacg gcagccgcca
    16081 catggttcac gagctggttt ctaacctgcg taaagagctg gcaggtgttg ctggctgtgc
    16141 ggttgcaatc gcaccaccgg aaatgtacat cgatatggcg aagcgcgaag ctgaaggcag
    16201 ccacatcatg ctgggtgcgc aaaacgtgga cctgaacctg tccggcgcat tcaccggtga
    16261 aacctctgct gctatgctga aagacatcgg cgcacagtac atcatcatcg gccactctga
    16321 acgtcgtact taccacaaag agtctgacga actgatcgcg aaaaaattcg cggtgctgaa
    16381 agagcagggt ctgactccgg ttctgtgcat cggtgaaacc gaagctgaaa acgaagcggg
    16441 caaaactgaa gaagtttgcg cacgtcagat cgacgcggta ctgaaaactc agggtgctgc
    16501 ggcattcgaa ggtgcggtta tcgcttacga acctgtatgg gcaatcggta ctggcaaatc
    16561 tgcaactccg gctcaggcac aggctgttca caaattcatc cgtgaccaca tcgctaaagt
    16621 tgacgctaac atcgctgaac aagtgatcat tcagtacggc ggctctgtaa acgcgtctaa
    16681 cgctgcagaa ctgtttgctc agccagacat cgacggcgcg ctggttggcg gtgcgtctct
    16741 gaaagctgac gctttcgcag taatcgttaa agctgcagaa gcggctaaac aggcttaagt
    16801 ctgacaggtg ccggatttca tatccggcac ttactttcct taactcttcg ccttaacgca
    16861 aaatctcaca ctgatgatcc tgaatttcct cggctgaagc acggttaagc gtcagtagat
    16921 ttcgttgtgt cgccagcaat acaaatgagt tatcactctg ccgtaccatc gccagcccgt
    16981 agcttcccat atgttcccgc gcctcaggta cttcttctgc cagcatcata aatgggctgc
    17041 gttgtaccag ttcgctttcc gttacccgac gcgccaggta ttcatgcccg cgcaaaccac
    17101 ctggcagtgg caaccagcgg ctgctgatgt tcgccagatt gttatccagt tgttcgcgca
    17161 catcaggacg aatacaagag atatgaatat gaaaatggtt ttgcgtacgc ccggtgcggg
    17221 agttgatcgc caaagaaacc gcgcgatcgg gaaccggctg gccgtacttt ttgctcataa
    17281 aatcacgcgc ctgccaggcc aaccaaaaga agttcggcgt tgaaggatcg gtcaacaaag
    17341 gactttcagt accgttaata cgatacgttg gcatcaacag atattgcagt gggccattaa
    17401 gatcttttaa aaccacgtat ccggcattgg gtttgacttc cgcacatggc gaaggatttt
    17461 gattttgctg ctgattgggc aaacattcct caaggacaat cttacgtaat gtatccgact
    17521 cttcaccggt taatttccag taaccaatac cggcagccac aacggcgata actatcatca
    17581 ccaaaaaaag aagacccgct tttttcatct ttttttccct gtacctcaaa gagatgcaag
    17641 ggtaacgcaa aatcgtgaca aataaaaaac ccggtcgcga gaaaccaccg ggtttgataa
    17701 ttatcctggg gaaatcagcg tttgctgatc tgatcgaacg taccgccgtt agcaaaatgc
    17761 tctttttgcg ctttcgtcca gccgccgaac tcttcatcaa tggtgaataa cttcagcttt
    17821 ggaaacgcat tttcgtactt tttcgctact tcagcgtcgc gcggacggta gtagtttttc
    17881 gcggcaattt cctgaccttc tggcgagtag agatatttca ggtaggcttc cgccacctct
    17941 ttggtgcctt ttttctcgac cactttatcg accaccgaca cggttggctc tgcgaggata
    18001 gactcactcg gcgtgacgat ttcgaattta tctttcccca gttcattcgc tgccagcaga
    18061 gcttcgtttt cccaggcgat cagtacatcg ccaatcccgc gctcgacaaa ggtgttagtg
    18121 gagccgcgcg cgccagaatc cagaacttcg acgtttttat acagtgcccg aacaaaatcc
    18181 tgtgcttttg cctgatcgtt gttgttgtga tgcagcgcgt agccccaggc agccaggtag
    18241 ttccagcgtg cgccaccaga gcttttcgga ttaggcgtga tcaccgaaac acccggttta
    18301 atcagatcgt tccagtcatg gatctgcttc ggattgccct tacgcaccag gaaaacaatg
    18361 gtggaagtgt acggtgcgga gttatccggc agacgtttga tccactcttt atcaatccgc
    18421 ccgcgttccg caattgcgtc cacgtcatag gccagagcca gcgtgacaac atcagcttca
    18481 ataccgttga ttaccgacgt cgcttgttta cctgaaccac cgtgtgactg acgcatcacc
    18541 acgttatcac cagtttgctg tttccagtgg gcgctgaatg ccttgttgta ctgttcgtac
    18601 aattcgcgcg ttggatcata tgaaacgtta agaagctgaa tatcctttgc cataacgctg
    18661 gttgccgcca gcaaaaatgt taaccctacg ccccacttgt tcatcgcccg actctcttat
    18721 gttgtgttgt gatgagcaaa gcgtgccaga aggttaacca aacattaaag aataaaaaaa
    18781 gattggctat aacttgcggg tatatgttga gggattaaaa aggcggaaga aatccgcctc
    18841 atattgctga caaagtgcgc tttgtccatg ccggatgcgg cgcgaacgcc ttatccggcc
    18901 tacaaaagtt tgcaaattca ataaattgca gaattcatgt aggcctgata agcgaagcgc
    18961 atcaggcatt tttgcttctg tcatcggttt caggctaaag gaatctgcct ttttccgaaa
    19021 tcattaatac agttttttcg cgcagtccag ccagtcacct ttgaacggac gcttcatgtt
    19081 ttcgatagcg tcgatgatgt cgtggtgaac cagctgttcg ttctggatac ctacacaacg
    19141 accgccgtaa cctgccagca gcagatcgat agcgtaagcg cccatacggg aagccagaat
    19201 acggtcgtaa ggcaccggag aaccaccgcg ctggatgtgg cccagcacag ttgcgcgggt
    19261 ttcacgaccg gtttctttct cgatgaaatg cgccagttcg tcaacatcac acatatgttc
    19321 ggtaatcgcc acgatcgcgt gttttttacc tttcgcgata cccgctttga tttcgtttac
    19381 caggtcttca cggctgaatt caacttccgg aaccacaacg aattcacagc caccggcaat
    19441 ggccgcagcc aacgtcagat cgccacaata acggcccatc acttccacca cggaaatacg
    19501 ctggtgagaa gaagaggtgt cacgcagacg gtcgatcgct tctacaacgg tgctcagcgc
    19561 agtgaagaaa ccgatagtgt agtcagtgcc tttgatgtcg ttgtcgatag tgcccggcag
    19621 accgatgcac gggaagccca tttcggtcag acgcattgca cccatgtagg aaccgtcacc
    19681 gccgataacc accagcgcgt cgataccacg ttttttcagg ttttcgatag ccacggcgcg
    19741 gatgttctcg tcgcggaatt ccgggaaacg cgcagaaccg aggaacgtac cgccacggtt
    19801 gatcatgtca gacacgctgt aacggtctag ctgtaccata cggtcttcat acagacccag
    19861 atagccgtca taaataccca ttacttccag accttctgtc agcgcagaac gaacaacccc
    19921 gcgaattgcg gcgttcatgc ctggcgcatc accgccgctt gtcaacacac cgattttctt
    19981 aatcatgact acctctgaac tttggaatgc aaaatgaaat ctgttgccgg aagtcttctt
    20041 gcacatcgaa gtgatccaac gaatgtgcaa atagtataac aatcacttcc tgctgaattg
    20101 attcaggtca ggccaaatgg cggtatttta tacacaaaat gcgggtctgg ctctctttta
    20161 tactgattat gaaagcatag accgtttacc ctccctgggt acgacggaac aggggtcctg
    20221 atggataatt acatccgatc ccggaaaacg ccgtaaaata gcctgctcta cctgatccgc
    20281 caccatatgt gcctgaacca aaggcagaga gtcttccatt tccaaatgaa tctgaataaa
    20341 gcgggtcggc cctgactgcc gcgtgcgaag atcgtgagcg ccgctaacac ccggccagga
    20401 agtcacgata tcaataattt cttgccgttc ctcatcaggc aatgcgcgat ccagtaatga
    20461 ctgtaccgcc tcatatccca tgcgtaacgc gctatataaa atatagatgc cgattcccaa
    20521 tgcaaacaga gcatcggcgc gatgccagcc gtaccaggac aaccccagcg ccagcagaat
    20581 tgcgccgttc atcataacat cagactggta atgtagcata tcagcccgca ccgcctggct
    20641 ttgcgtccgg cgcaccaccc aacgctgaaa cgagacaagg ataatcgtac aaattagcgc
    20701 cacaattgtc acgataaccc cgacgcctgg atctatcatc ggtgttggag atatcagatg
    20761 ttgaataccc gtcaaaaaca ggaatagtgc cgaaccggag ataaacatac tttgcgccag
    20821 cgccgcgagg gactctgctt taccgtgacc aaacgagtga ttatcgtcgg caggttgcag
    20881 ggaatatcgc accaccagta aattcgtcaa cgacgcgccg atatccacca gcgaatccac
    20941 cagcgcggcg agaatactca ccgacccggt ataccaccat gcaaaaattt taatcagcaa
    21001 tagcaacgaa gccatcgccg tcgcagcaat cgccgcccga ctgaccagcc gtccataaga
    21061 ttgattcata aatactcccg ctatcaactg acgctagtat aacggaagca aatcatctgc
    21121 aatgcattaa gcagcaggca aattgaggat aaaaaaaacc ccacatcatg tgggggaaga
    21181 cagggatggt gtctatggca aggaaaacag ggtttactac tgggaacgtg agttgctact
    21241 actcaatagc ttcaacgatg aacttttttg ccattgcgtc acgtcacgca actgctccat
    21301 tcgttgttga tgtttctcgt ttaaaaccgc ttgctgctcc ggcgttaaca ggcgatacat
    21361 ttggttgcgg acttttgcca tctcaacctg acgagcaatt tgctcattcg ccattttttc
    21421 tgcctgtgcg cgcacagcgt tttcatcaaa attttctgcg gtgacaaggc gatgcattgt
    21481 ctccagttcg ctaacattaa caggaggctg ttcgtgccgg gcctgttgca taagatctcg
    21541 catctgctga cgctgatgtt cggttaaact tatgccgtcg aacatatggc tctgcgtact
    21601 gcgctgcgta ctgcgctgcg taagttcttc acccggatgc cagttatcgc ctgaaccgac
    21661 ttcagcagcg tggcttaatg aactgactgc cagcgttgaa gccatgacgg cagcggtaac
    21721 tatgcgcatc atttgctccc aaaatctttc tgtcgcgatt caacgataga gagtttacga
    21781 ttcaggctgc aaacatgcgt cagggggtgt aaaacaacgt aaagtcatgg attagcgacg
    21841 tctgatgacg taatttctgc ctcggaggta tttaaacaat gaataaaatc ctgttagttg
    21901 atgatgaccg agagctgact tccctattaa aggagctgct cgagatggaa ggcttcaacg
    21961 tgattgttgc ccacgatggg gaacaggcgc ttgatcttct ggacgacagc attgatttac
    22021 ttttgcttga cgtaatgatg ccgaagaaaa atggtatcga cacattaaaa gcacttcgcc
    22081 agacacacca gacgcctgtc attatgttga cggcgcgcgg cagtgaactt gatcgcgttc
    22141 tcggccttga gctgggcgca gatgactatc tcccgaaacc gtttaatgat cgtgagctgg
    22201 tggcacgtat tcgcgcgatc ctgcgccgtt cgcactggag cgagcaacag caaaacaacg
    22261 acaacggttc accgacactg gaagttgatg ccttagtgct gaatccaggc cgtcaggaag
    22321 ccagcttcga cgggcaaacg ctggagttaa ccggtactga gtttaccctg ctctatttgc
    22381 tggcacagca tctgggtcag gtggtttccc gtgaacattt aagccaggaa gtgttgggca
    22441 aacgcctgac gcctttcgac cgcgctattg atatgcacat ttccaacctg cgtcgtaaac
    22501 tgccggatcg taaagatggt cacccgtggt ttaaaacctt gcgtggtcgc ggctatctga
    22561 tggtttctgc ttcatgatag gcagcttaac cgcgcgcatc ttcgccatct tctggctgac
    22621 gctggcgctg gtgttgatgt tggttttgat gttacccaag ctcgattcac gccagatgac
    22681 cgagcttctg gatagcgaac agcgtcaggg gctgatgatt gagcagcatg tcgaagcgga
    22741 gctggcgaac gatccgccca acgatttaat gtggtggcgg cgtctgttcc gggcgattga
    22801 taagtgggca ccgccaggac agcgtttgtt attggtgacc accgaaggcc gcgtgatcgg
    22861 cgctgaacgc agcgaaatgc agatcattcg taactttatt ggtcaggccg ataacgccga
    22921 tcatccgcag aagaaaaagt atggccgcgt ggaactggtc ggtccgttct ccgtgcgtga
    22981 tggcgaagat aattaccaac tttatctgat tcgtccggcc agcagttctc aatccgattt
    23041 cattaactta ctgtttgacc gcccgctatt actgctgatt gtcaccatgt tggtcagtac
    23101 gccgctgctg ttgtggttgg cctggagtct ggcaaaaccg gcgcgtaagc tgaaaaacgc
    23161 tgccgatgaa gttgcccagg gaaacttacg ccagcacccg gaactggaag cggggccaca
    23221 ggaattcctt gccgcaggtg ccagttttaa ccagatggtc accgcgctgg agcgcatgat
    23281 gacctctcag cagcgtctgc tttctgatat ctctcacgag ctgcgcaccc cgctgacgcg
    23341 tctgcaactg ggtacggcat tactgcgccg tcgtagcggt gaaagcaagg aactggagcg
    23401 tattgaaacc gaagcgcaac gtctggacag catgatcaac gatctgttgg tgatgtcacg
    23461 taatcagcaa aaaaacgcgc tggttagcga aaccatcaaa gccaaccagt tgtggagtga
    23521 agtgctggat aacgcggcgt tcgaagccga gcaaatgggc aagtcgttga cagttaactt
    23581 cccgcctggg ccgtggccgc tgtacggcaa tccgaacgcc ctggaaagtg cgctggaaaa
    23641 cattgttcgt aatgctctgc gttattccca tacgaagatt gaagtgggct ttgcggtaga
    23701 taaagacggt atcaccatta cggtggacga cgatggtcct ggcgttagcc cggaagatcg
    23761 cgaacagatt ttccgtccgt tctatcggac cgatgaagca cgcgatcgtg aatctggcgg
    23821 tacaggattg gggctggcga ttgttgaaac cgccattcag cagcatcgtg gctgggtgaa
    23881 ggcagaagac agcccgctgg gcggtttacg gctggtgatt tggttgccgc tgtataagcg
    23941 gagttaaact ccgcatttgt aggcaggata aggcgtttac gccgcatccg gcatttgagc
    24001 aggatgcctg atgcgacgct gatagcgtct tatcaggcct acactccggg ggttattttc
    24061 cccacaaccg gcgggaaaaa tcttcgatct tgccgctcag tcggcgcttt tgcatcgtcc
    24121 gcgtccagct tttcgataac ccggcggcgg agagtaaacg gtgatactga tcgtcatcaa
    24181 acggcatatg ccatgcgatg gcggcagcct cctgcacggt cacatcgctg acacgggaaa
    24241 ccaactccag cggcgcgtcc gcagacactt tccctggcgc tatcacgcta tacaaccacc
    24301 ccaccttacc tgtgttttgc atcaactgcg ctatatcgct gatatcaaaa tggtaattga
    24361 gtttatagca aggcgagcgc ggctggctga cctgaattaa tgcctctccc cagcggaaaa
    24421 tatcgcccat ataaacatta ctttccgtca ggccgtcggt tgagaggttt tcaccaaacg
    24481 caggcgcaac aaacaactcc gcctgttccg gaaattcccg cgcccagtag agataatgct
    24541 cacgaggata atgacacagc gctctgtctg gcccaccatg aacctttttc tccgcctgct
    24601 cgtcaccttc cagccccagc tccgtcagca tcaactcacc atcaacctgg attttggcaa
    24661 ttgcgctggg tttgccttcg ggataagcct gaatcttgcc tgtgtataca tcaaccggat
    24721 atcgcatctg ttccctctcc acgagaaatt tccccattag accatattta ttttatgtca
    24781 ggcgtgctgt tttcgcggta agtatccagg caggaactca atagcaaacc ggacgaacgt
    24841 tagttcatcc ggctgtgggg attaaggaag caggtttatt tcaccgtacc taaaatttcg
    24901 attttcgctg ctctggcttt gactttacgt gaccagatag aggtaagaat tggcaccaga
    24961 atcgaagtca caatgaccgc cgtcgctacc agcgaagttg ctgccggagc catcggttta
    25021 aacgcaggca ccatttctgc aatcagcata ggtgtcgcta ccgcggcccc tgcggaactg
    25081 gaagcggcaa ttccggcagt gccatcgcca ccgccaatca atttatcggc gataatcaac
    25141 ggaataccgg tcacgataat tactgccaca cccaacagga tccccagcaa accagtctgg
    25201 gcaatcacag tcaaatcaat ggtattgccc agcgcgaagg caaagaatgg aatcagcgtt
    25261 tgcaccgctt tgctgaaaaa ttctcgtaat tcagggtcaa ggttccccag ggcaaagccc
    25321 accaggaacg gtaatactgc gccgacgaaa acatgcggtt caaacgaggc aatccctgca
    25381 gtgcccagaa taatcatcgt catgagcggc ccggactcca acgacatcaa cacaaatgcc
    25441 ccagcttctt cttttgtgcc gtactgctgc atgatggaag cgtaaagtcc gccattggtc
    25501 atatccatcg ccgccaccag cgccagcgtt gaaagtccgg caaagaatcc aacttcaaca
    25561 ccatgttccg gaataatgcg cgaggcaatt gccgcaacca cccacgcgac ggcaattttt
    25621 gttaccacca gcgtaccgga tttacgcaat accgttcccg tcgcgcttaa ttttattgac
    25681 gcccccatgc aaaaaaacca caccgccaga atggacaccg taccggtaat catcccgttg
    25741 gtgaatgatc caaaatattt ccccgccccc ggcgagaagg tgtggcacag tgcgccaagg
    25801 aatagcggga cgagcatcat ccccccccgg gattttctca atcgagcgtt ttatctgcat
    25861 ttccatcacc tgtcggcata tttttaaggg ctgatgcgta attcctcaat ggagcatcag
    25921 tgttgatgga aacgaagata gacattcatt taatcaataa aagtgatcaa aaccacatca
    25981 attgaaacgc tgctttattt ttatcggatc attgttttta ttttgaaatt gatcacaaaa
    26041 aaaccaccgc cgttggcgat ggttcatttt ttaagctgat atgcggcgta aacgcctcat
    26101 tgcagcaggc ggcaaatgat tattttttcg ccgcgaaacg tgccgctgct tcatcccagt
    26161 tcaccacgtt ccagaactct ttgatgtagt ccggacggcg gttctggaat ttcaggtagt
    26221 aagcatgttc ccacacatcc aggcccagaa tcgggaagcc ggaagcgcca gaaatagctt
    26281 cacccatcag cggggaatcc tggttagcag tagaaaccac cgccagttta tcgcctttca
    26341 gcaccagcca tgcccagccg gaaccaaagc gggaagctgc cgctttctca aattctgctt
    26401 tgaagttatc aacggagccg aagtcacgtt cgatagccgc tttcaggtca ccctgtaagg
    26461 tggtgccttt tttcagacct ttccagaaca ggctgtggtt agcgtgaccg ccagcgttgt
    26521 tgcgcagtac ggttttcttg tctgctggca gctggtccag tttggtgatc agctcttcaa
    26581 ccggcaggtt ggcaaattct ggcaggcttt ccagcgccgc gttggcgttg ttgacgtagg
    26641 tctgatggtg tttggtgtgg tggatttcca tggtctgctt atcgaagtgc ggttccaggg
    26701 catcgtaagc atacggcagg gatggcaggg tatagctcat attcatctcc agtattgtcg
    26761 ggcggccgat tgttaatgcg cgtaagcagt tggttcatta tagttaatta aatgatattg
    26821 aaaatgatta tcaatgccgt acttttcgta agggtatggt tttgcaggaa aattcccgag
    26881 atgtgaagca aatcacccac ttaatgccgt gattgccagt aaatcgacaa cggcggcaac
    26941 aggcgaaagg ttaatcgaca gcacgatttt tacactcatc tcgtcggaga tgtgacgcga
    27001 cgaaaaatga tgaggataag aagatgagta acgcgattac gatggggata ttttggcatt
    27061 tgatcggcgc ggccagtgca gcctgttttt acgctccgtt caaaaaagta aaaaaatggt
    27121 catgggaaac catgtggtca gttggtggga ttgtttcgtg gattattctg ccgtgggcca
    27181 tcagcgccct gttactgccg aatttctggg cgtattacag ctcgtttagt ctctctacgc
    27241 tgctgcctgt ttttctgttc ggcgctatgt gggggatcgg taatatcaac tacggcctga
    27301 ccatgcgtta tctcggcatg tcgatgggaa ttggcatcgc cattggcatt acgttgattg
    27361 tcggtacgct gatgacgcca attatcaacg gcaatttcga tgttctgctt aataccgaag
    27421 gcggacgcat gacgttgctc ggcgttctgg tggcgctgat tggtgtaggg attgtgactc
    27481 gcgccgggca gttgaaagag cgcaaaatgg gcattaaagc cgaagagttc aacctgaaaa
    27541 aagggctggt gctggcggtg atgtgcggca ttttctctgc cggtatgtct tttgcgatga
    27601 acgccgcaaa accgatgcat gaagccgctg ccgcactggg cgtcgatcca ctgtatgtcg
    27661 ctctgccaag ctatgtcatc atcatgggcg gcggcgcgat catcaacctc ggtttctgct
    27721 tcattcgtct ggcaaaagtg aaggatttgt cgctaaaagc cgacttctcg ctggcaaaac
    27781 cgctgatcat tcacaatgtg ttactctcag cactgggcgg gttgatgtgg tatctgcaat
    27841 tctttttcta tgcctggggc cacgcccgca ttccggcgca gtatgactac atcagttgga
    27901 tgctgcatat gagtttctat gtattgtgcg gcggtatcgt cgggctggtg ctgaaagagt
    27961 ggaacaatgc aggtcgccgt ccggtaacgg tgttgagcct cggttgtgtg gtgattattg
    28021 tcgccgccaa catcgtcggc atcggcatgg cgaattaatc tttctgcgaa ttgagatgac
    28081 gccactggct gggcgtcatc ccggtttccc gggtaaacac caccgaaaaa tagttactat
    28141 cttcaaagcc acattcggtc gaaatatcac tgattaacag gcggctatgc tggagaagat
    28201 attgcgcatg acacactctg acctgccgca gatattgatt gatggtcatt ccagtctgct
    28261 ggcgaaattg ctgacgcaaa acgcgctcac tgcacgatgc ctcatcacaa aatttatcca
    28321 gcgcaaaggg acttttcagg ctagccgcca gccgggtaat cagcttatcc agcaacgttt
    28381 cgctggatgt tggcggcaac gaatcactgg tgtaacgatg gcgattcagc aacatcacca
    28441 actgcccgaa cagcaactca gccatttcgt tagcaaacga cacatgctga ctactttcat
    28501 gctcaagctg accgataacc tgccgcgcct gcgccatccc cacgctacct aagcgccagt
    28561 gtggttgccc tgcgctggcg ctaaatcccg gaatcgctcc ctgccagtca agattcagct
    28621 tcagccgctc cgggcaataa ataatattct gcaaaaccag atcgttaacg gaagcgtagg
    28681 agtgtttatc gtcagcatga atgtaaaaga gatcgccacg ggtaatgcga taagggcgat
    28741 cgttgagtac atgcagacca ttaccgcgcc agacaatcac cagctcacaa aaatcatgtg
    28801 tatgttcggc aaaaacatct tgcggataac ggtcagccac agcgactgcc tgctggtcgc
    28861 tggcaaaaaa atcatctttg agaagtttta actgatgcgc caccgtggct acctcggcca
    28921 gagaacgaag ttgattattc gcaatatggc gtacaaatac gttgagaaga ttcgcgttat
    28981 tgcagaaagc catcccgtcc ctggcgaata tcacgcggtg accagttaaa ctctcggcga
    29041 aaaagcgtcg aaaagtggtt actgtcgctg aatccgcagc gataggcgat gtcagtaacg
    29101 ctggcctcgc tgtgacgtag cagatgtcgg gccttcatca gtcgcaggcg gttcaggtaa
    29161 cgctgaggcg tcagtcccgt ttgctgctta agctgccgat gtagcgtacg cagtgaaaga
    29221 gaaaattgat ccgccacggc atcccaattc acctcatcgg caaaatggtc ctccagccag
    29281 gccagaagca agttgagacg tgatgcgctg ttttccaggt tctcctgcaa actgctttta
    29341 cgcagcaaga gcagtaattg cataaacaag atctcgcgac tggcggtcga gggtaaatca
    29401 ttttcccctt cctgctgttc catctgtgca accagctgtc gcacctgctg caatacgctg
    29461 tggttaacgc gccagtgaga cggatactgc ccatccagtt cttgtggcag caactgattc
    29521 agcccggcga gaaactgaaa tcgatccggc gagcgataca gcacattggt cagacacaga
    29581 ttatcggtat gttcatacag atgccgatca tgatcgcgta cgaaacagac cgtgccaccg
    29641 gtgatggtat agggctgccc attaaacaca tgaatacccg tgccatgttc gacaatcaca
    29701 atttcatgaa aatcatgatg atgttcagga aaatccgcct gcgggagccg gggttctatc
    29761 gccacggacg cgttaccaga cggaaaaaaa tccacactat gtaatacggt catactggcc
    29821 tcctgatgtc gtcaacacgg cgaaatagta atcacgaggt caggttctta ccttaaattt
    29881 tcgacggaaa accacgtaaa aaacgtcgat ttttcaagat acagcgtgaa ttttcaggaa
    29941 atgcggtgag catcacatca ccacaatgaa gcaaattgtg aacatcatca cgttcatctt
    30001 tccctggttg ccaatggccc attttcctgt cagtaacgag aaggtcacga attcaggcgc
    30061 tttttagact ggtcgtaatg aaattcagca ggatcacatt atgacctttc gcaattgtgt
    30121 cgccgtcgat ctcggcgcat ccagtgggcg cgtgatgctg gcgcgttacg agcgtgaatg
    30181 ccgcagcctg acgctgcgcg aaatccatcg ttttaacaat ggcctgcata gccagaacgg
    30241 ttatgtcacc tggaatgtgg atagcctgga aagtgccatt cgccttggat taaacaaggt
    30301 gtgcgaggaa gggattcgta tcgatagcat tgggattgat acctggggcg tggactttgt
    30361 gctgctcgac caacagggtc agcgtgtggg cctgcccgtt gcttatcgcg atagccgctc
    30421 caatggccta atggcgcagg cacagcaaca actcggcaaa cgcgatattt atcaacgtag
    30481 cggcatccag tttctgccct tcaatacgct ttatcaactg cgtgcgctga cggagcaaca
    30541 acctgaactt attccacaca ttgctcacgc tctgctgatg ccggattact tcagctatcg
    30601 cctgaccggc aagatgaact gggaatatac caatgccacc accacacaac tggtcaatat
    30661 caatagcgac gactgggacg agtcgctact ggcgtggagc ggggccaaca aagcctggtt
    30721 tggtcgcccg acgcatccgg gtaatgtcat tgggcactgg atttgcccgc agggtaatga
    30781 gattccggtg gtcgccgttg ccagccatga taccgccagc gcggttatcg cctcgccgtt
    30841 aaacggttca cgcgctgctt atctctcttc tggcacctgg tcattgatgg gcttcgaaag
    30901 ccagacgcca tttaccaatg acacggcgct ggcagccaac ataaccaatg aaggcggggc
    30961 ggaaggtcgc tatcgggtgc tgaaaaatat tatgggctta tggctgcttc agcgagtgct
    31021 tcaggagcgg caaatcaacg atctcccggc gcttatcgcc gcgacacagg cacttccggc
    31081 ctgccgcttc atcatcaatc ccaatgacga tcgctttatt aatcctgagg cgatgtgcag
    31141 cgaaattcag gctgcgtgtc gggaaacggc gcaaccgatc ccggaaagtg atgctgaact
    31201 ggcgcagcta cgcggtgaag atttctcgca actgcatatt gtcggcggcg gctgccagaa
    31261 cacgctgctc aaccagctat gtgccgatgc ctgcggtatt cgggtgatcg ccgggcctgt
    31321 tgaagcctcg acgctcggca atatcggcat ccagttaatg acgctggatg aactcaacaa
    31381 tgtggatgat ttccgtcagg tcgtcagcac caccgcgaat ctgaccacct ttacccctaa
    31441 tcctgacagt gaaattgccc actatgtggc gcagcttcac tctacacgac agacaaagga
    31501 gctttgcgca tgaccactca actggaacag gcctgggagc tggcgaaaca gcgtttcgcg
    31561 gcggtgggga ttgatgtcga ggaggcgctg cgccaacttg atcgtttacc cgtttcaatg
    31621 cactgctggc agggcgatga tgtttccggt tttgaaaacc cggaaggttc gctgaccggg
    31681 gggattcagg ccacaggcaa ttatccgggc aaagcgcgta atgccagtga gctacgtgcc
    31741 gatctggaac aggctatgcg gctgattccg gggccgaaac ggcttaattt acatgccatc
    31801 tatctggaat cagatacgcc agtctcgcgc gaccagatca aaccagagca cttcaaaaac
    31861 tggggtgaat gggcgaaagc caatcagctc ggtctggatt ttaacccctc ctgcttttcg
    31921 catccgctaa gcgccgatgg ctttacgctc tcgcatcccg acgacagcat tcgccagttc
    31981 tggattgatc actgcaaagc cagccgtcgc gtttcggcct attttggcga gcaactcggc
    32041 acaccatcgg tgatgaacat ctggatcccg gatggtatga aagatatcac cgttgaccgt
    32101 ctcgccccgc gtcagcgtct gctggcagca ctggatgagg tgatcagcaa gaagctaaac
    32161 cctgcgcacc atatcgacgc cgttgagagc aaattgtttg gcattggcgc agagagctac
    32221 acggttggct ccaatgagtt ttacatgggg tatgccacca gccgccagac tgcgctgtgc
    32281 ctagacgccg ggcacttcca cccgactgaa gtgatttccg acaagatttc cgccgccatg
    32341 ctgtatgtgc cgcagttgct gctgcacgtc agccgtccgg ttcgctggga ctgcgatcac
    32401 gtagtgctgc tggatgatga aacccaggca attgccagtg agattgtgcg tcacgatctg
    32461 tttgaccggg tgcatatcgg ccttgacttc ttcgatgcct ctatcaaccg cattgccgcg
    32521 tgggtcattg gtacacgcaa tatgaaaaaa gccctgctgc gtgcgttgct ggaacctacc
    32581 gctgagctgc gcaagctgga agcggcgggc gattacactg cgcgtctggc actgctggaa
    32641 gagcagaaat cgttgccgtg gcaggcggtc tgggaaatgt attgccaacg tcacgatacg
    32701 ccagcaggta gcgaatggct ggagagcgtg cgggcttatg aaaaagaaat tttgagccag
    32761 cgtgggtaaa cactgccgga tgcggcgcga gcgccttatc cggcctacgg gtcggcaaca
    32821 gttgtaggcc tgataagacg cgacagcgtc gcatcaggca ttgattgccg gatgcggcac
    32881 gagtgcctta tccggcctac aggtcggcaa tagttgtagg cctgataaga cgcgacagcg
    32941 tcgcatcagg cattgattgc cggatgcggc acgagcgcct tatccggcct acgggtcgtg
    33001 catctgacaa caccgaattt acaggaacac agaacatgca aaacattacc cagtcctggt
    33061 ttgtccaggg aatgatcaaa gccaccaccg atgcctggct gaaaggctgg gacgaacgca
    33121 acggcggcaa cctgacgctg cgcctggatg acgccgatat cgcgccttat aaagacaacg
    33181 tccatgcaca accgcgctat atcccgctca gccagcccat gcctttactg gcaaatacac
    33241 cgtttattgt caccggctcc ggcaaattct tccgtaacgt ccagctcgat cctgcagcta
    33301 acttaggcgt cgtaaaagtc gacagcgatg gcgcgggcta ccatattctc tgggggttaa
    33361 ccaacgaagc cgtcccgaca tccgaactcc cggcgcactt tctctcccac tgcgagcgca
    33421 ttaaagccac caacggtaaa gatcgggtga tcatgcactg ccacgccacc aacctgatcg
    33481 ccctcaccta tgtactggaa aacgacaccg cggtctttac tcgccaactg tgggaaggca
    33541 gcaccgagtg tctggtggta ttcccggatg gcgttggcat tctgccgtgg atggtgcccg
    33601 gcacggacga aatcggccag gcgaccgcac aagagatgca aaaacattcg ctggtgttgt
    33661 ggcccttcca cggcgtcttc ggcagcgggt cgacgttgga tgaaacattc ggtttaatcg
    33721 acaccgcaga aaaatcagca caagtattag tgaaggttta ttcgatgggc ggcatgaaac
    33781 agaccatcag ccgtgaagag ttgatagcgc tcggcaagcg ctttggcgtt acaccactag
    33841 ccagtgcgct ggcgctgtaa ggagcaaaca tgatccgcaa agcctttgtc atgcaggtta
    33901 accccgacgc ccacgaagag tatcagcgtc ggcataaccc catctggccg gaactggaag
    33961 cagtgttgaa atctcacggt gcgcataact acgccattta cctcgacaaa gcgcgtaatc
    34021 tgctgtttgc cacggtagag attgaatctg aagaacggtg gaatgcggta gccagtgctg
    34081 atgtttgcca acgttggtgg aaatatatga ccgatgttat gcccgctaac ccggataaca
    34141 gcccggtgag tagcgagctg
//
LOCUS       DADMIB010000027        34059 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.027, whole genome shotgun sequence.
ACCESSION   DADMIB010000027 DADMIB010000000
VERSION     DADMIB010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34059
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.027"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1266..2045
                     /gene="ipaJ"
                     /locus_tag="JNZ89_001230"
     CDS             1266..2045
                     /gene="ipaJ"
                     /locus_tag="JNZ89_001230"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     protease IpaJ"
                     /protein_id="HAY8935161.1"
                     /translation="MSEQRKPCKRGCIHTGVMLYGVLLQGAIPREYMISHQTDVRVNE
                     NRVNEQGCFLARKQMYDNSCGAASLLCAAKELGVDKIPQYKGSMSEMTRKSSLDLDNR
                     CERDLYLITSGNYNPRIHKDNIADAGYSMPDKIVMATRLLGLNAYVVEESNIFSQVIS
                     FIYPDARDLLIGMGCNIVHQRDVLSSNQRVLEAVAVSFIGVPVGLHWVLCRPDGSYMD
                     PAVGENYSCFSTMELGARRSNSNFIGYTKIGISIVITNEAL"
     gene            complement(2989..3918)
                     /locus_tag="JNZ89_001231"
     CDS             complement(2989..3918)
                     /locus_tag="JNZ89_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Virulence regulon transcriptional activator
                     VirB"
                     /protein_id="HAY8935162.1"
                     /translation="MVDLCNDLLSIKEGQKKEFTLHSGNKVSFIKAKIPHKRIQDLTF
                     VNQKTNVRDQESLTEESLADIIKTIKLQQFFPVIGREIDGRIEILDGTRRRASAIYAG
                     ADLEVLYSKEYISTLDARKLANDIQTAKEHSIRELGIGLNFLKVSGMSYKDIAKKENL
                     SRAKVTRAFQAASVPQEIISLFPIASELNFNDYKILFNYYKGLEKANESLSSTLPILK
                     EEIKDLDTNLPPDIYKKEILNIIKKSKNRKQNPSLKVDSLFISKDKRTYIKRKENKTN
                     RTLIFTLSKINKTVQREIDEAIRDIISRHLSSS"
     gene            complement(4135..4371)
                     /locus_tag="JNZ89_001232"
     CDS             complement(4135..4371)
                     /locus_tag="JNZ89_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HAY8935163.1"
                     /translation="MIKEKILSIVAFCYGIAYSKLSEETKFIEDLSADSLSLIEMLDM
                     ISFEFNLRIDESALEHIITIGDLISVVKNSTKSI"
     gene            complement(4375..6276)
                     /gene="ipaA"
                     /locus_tag="JNZ89_001233"
     CDS             complement(4375..6276)
                     /gene="ipaA"
                     /locus_tag="JNZ89_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector invasin IpaA"
                     /protein_id="HAY8935164.1"
                     /translation="MHNVNNTQAPTFLYKATSPSSTEYSELKSKISDIHSSQTSLKTP
                     ASVSEKENFATSFNQKCLDFLFSSSGKEDVLRSIYSNSMNAYAKSEILEFSNVLYSLV
                     HQNDLNFENEKGLQKIVAQYSELIIKDKLSQDSAFGPWSAKNKKLHQLRQNIEHRLAL
                     LAQQHTSGEALSLGQKLLNTEVSSFIKNNILAELKLSNETVSSLKLDDLVDAQAKLAF
                     DSLRNQRKNTIDSKGFGIGKLSRDLNTVAVFPELLRKVLNDILEDIKDSHPIQDGLPT
                     PPEDMPDGGPTPGANEKTSQPVIHYHINNDNRTYDNRVFDNRVYDNSYHENPENDAQS
                     PTSQTNDLLSRNGNSLLNPQRALVQKVTSVLPHSISDAVQTFANNSALEKVFNHTPDN
                     SDGIGSDLLTTSSQERSTNNSLSRGHRPLNIQNSSTTPPLHPEGVTSSNDNSSDTTKS
                     SASLSHRVASQINKFNSNTDSKVLQTDFLSRNGDTYLTRETIFEASKKVTNSLSNLIS
                     LIGTKSGTQERELQEKSKDITKSTTEHRINNKLKVTDANTINYVTETNADTIDKNHAI
                     YEKAKEVSSALSKVLSKIDDTSAELLTDDISDLKNNNDITAENNNIYKAAKDVTTSLS
                     KVLKNINKD"
     gene            complement(6285..7283)
                     /gene="ipaD"
                     /locus_tag="JNZ89_001234"
     CDS             complement(6285..7283)
                     /gene="ipaD"
                     /locus_tag="JNZ89_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle tip complex
                     protein IpaD"
                     /protein_id="HAY8935165.1"
                     /translation="MNITTLTNSISTSSFSPNNTNGSSTETVNSDIKTTTSSHPVSSL
                     TMLNDTLHNIRTTNQALKKDLSQKTLTKTSLEEIALHSSQISMDVNKSAQLLDILSKK
                     EYPINKDARELLHSAPKEAELDGYEMISHRELWDKIAKSINNINEQYLKVYEHAVSSY
                     TQMYQDFSAVLSSLAGWISPGGNDGNSVKLQVKSLKDELTKLKEKYKDKPLYPANNTV
                     SKEQANKWLTELGGTIGKVSEKNGGYVVNINMTPIDNMLKSLDNLGGNGEVVLDNAKY
                     QAWNAGFSAEDETMKNNLQTLVQKYSNANSIFDNLVKVLSSTISSCTDTDKLFLHF"
     gene            complement(7334..8425)
                     /gene="ipaC"
                     /locus_tag="JNZ89_001235"
     CDS             complement(7334..8425)
                     /gene="ipaC"
                     /locus_tag="JNZ89_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS translocon subunit IpaC"
                     /protein_id="HAY8935166.1"
                     /translation="MEIQNTKSAPILYTDISTKQTQSSSETQKSQNYQQLAAHIPLNV
                     GKNPVLTTTLNDDQLLKLSEQVQHDSEIIARLTDKKMKDLSEMSHTITPENTLDISSL
                     SSNAVSLIISVAVLLSALRTAETRLGSQLSLIAFDATKSAAENIVRQGLAALSSSITG
                     AVTQVGITGIGAKKTHSGISEQKGALRKNLATAQSLEKELAGSKLGLNKQIDTNITSP
                     QTNSSTKILGKNKLAPDNISLSTEHKTSLSSPDISLQDKIDTQRRAYELNTLSAQQKQ
                     NIGRATMETSAVAGNISTSGGRYTSALEEEEQLISQASSKQAEEASQVSKEASQATNQ
                     LIQKLLNIIDNINQSRNSTASQIAGNIRA"
     gene            complement(8445..10187)
                     /gene="ipaB"
                     /locus_tag="JNZ89_001236"
     CDS             complement(8445..10187)
                     /gene="ipaB"
                     /locus_tag="JNZ89_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocon subunit
                     IpaB"
                     /protein_id="HAY8935167.1"
                     /translation="MHNVSTTTTGLPLAKILASTELGDNTIQAANDAANKLFSLTIAD
                     LAANKNINTTNAHSTSNILIPELKAPKSLNASSQLTLLIGNLIQILGEKSLTALTNKI
                     TAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQ
                     IQTRLSELAPDSPENKKLRREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSMQLE
                     KEIDSFSAFSNTASAEQLSTQQKSLTGLASVTQLMATFIQLVGKNNEESLKNDLALFQ
                     SLQESRKTEMERKSDEYAAEVRKAEELNRVMGCVGKILGALLTIVSVVAAAFSGGASL
                     ALAAVGLALMVTDAIVQAATGNSFMEQALNPIMKAVIEPLIKLLSDAFTKMLEGLGVD
                     SKKAKMIGSILGAIAGALVLVAAVVLVATVGKQAAAKLAENIGKIIGKTLTDLIPKFL
                     KNFSSQLDDLITNAVARLNKFLGAAGDEVISKQIISTHLNQAVLLGESVNSATQAGGN
                     VASAVFQNNASKNLADLTLSKYQVEQLSKYIGDAIEKFGQLQEVIAELLASMSNSQAN
                     RTDVAKAILQQTTA"
     gene            complement(10193..10660)
                     /gene="ipgC"
                     /locus_tag="JNZ89_001237"
     CDS             complement(10193..10660)
                     /gene="ipgC"
                     /locus_tag="JNZ89_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocator chaperone
                     IpgC"
                     /protein_id="HAY8935168.1"
                     /translation="MSLNITENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAY
                     DFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN
                     DYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIKE"
     gene            complement(10718..11344)
                     /gene="ipgB"
                     /locus_tag="JNZ89_001238"
     CDS             complement(10718..11344)
                     /gene="ipgB"
                     /locus_tag="JNZ89_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein IpgB"
                     /protein_id="HAY8935169.1"
                     /translation="MQILNKILPQVEFAIPRPSFDSLSHNKLVKKILSVFNLKQRFPQ
                     KNFGCPVNINKIRDSVIDKIKDSNSGNQLFCWMSQERTSYVSSMINRSIDEMAIHNGV
                     VLTSDNKKNIFAAIEKKFPDIKLDEKSAQTSISHTALNEIASSGLRAKILKRYSSDMD
                     LFNTQMKDLTNLVSSSVYDKIFNESTKVLQIEISAEVLKAVYRQSNTN"
     gene            complement(11360..11749)
                     /gene="ipgA"
                     /locus_tag="JNZ89_001239"
     CDS             complement(11360..11749)
                     /gene="ipgA"
                     /locus_tag="JNZ89_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgA"
                     /protein_id="HAY8935170.1"
                     /translation="MCRKLYDKLYEITGAKLDFNDKNQAFILLEEQIPVCITDNDEYI
                     FLTGLLNEHELFTENIINPEHILILNYSLSRDYGSSICLLPDTHQCVLTKKHYKKYLS
                     PDELIESLYEFLFCIKLTIANITSEVN"
     gene            complement(11762..13246)
                     /gene="icsB"
                     /locus_tag="JNZ89_001240"
     CDS             complement(11762..13246)
                     /gene="icsB"
                     /locus_tag="JNZ89_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector IcsB"
                     /protein_id="HAY8935171.1"
                     /translation="MILKISNFIDASNTKGPIRVEDTEHGPILVAQKFNLKDLFFRTL
                     STINAKINSQILNEQLKNYRLANQKSLLLFLKTLASEKSAESAFAAYEAVKNSIQHSF
                     TGKDIKLMLNTAESFHGIGTAKNLERHLVFRCWGNRGITHLGHTSISIKNNLLQEPTH
                     TYLSWYPGGNVTKDTEINYLFEKRSGYSVDTYKQDKLNMISDQTAERLDAGQEVRNLL
                     NSKQDQNNNKKIFFPRANQKKDPYGYWGVSADKVYIPLSGDNKTKDGKISYNLFGLDE
                     TNMSKFICQKKADAFRQLANYKLISKSENCAGMALNVLKAGNSEIYFPLPDVKLVATP
                     NNVYAYANKVRQRIESLNQSYNEIMKYIESDFDLSRLTQLRRSYLKSFNKINLIHTPK
                     TFKPLSISLYKHPTENVSSEDFDAVINACHSYLVKSAPSNMSRVLNELKTGATDKKEV
                     IIEKSIKTIDYYNSLKSPDLGTKLYIHDLLQVNKLLLNNSHSNI"
     gene            13560..15176
                     /locus_tag="JNZ89_001241"
     CDS             13560..15176
                     /locus_tag="JNZ89_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector inositol
                     phosphate phosphatase"
                     /protein_id="HAY8935172.1"
                     /translation="MHITNLGLHQVSFQSGDSYKGAEETGNQKGVSVISYQRVKNGER
                     NKGVEALNRLYLQNQTSLTGKGLLFARDRAAVFYEAIKLAGGDTSKIKAMMEQLDTYK
                     LGEVDKRNINELNKVISEEIRAQLGIKNKKELQSEIKQIFTNYLNNKNWEPINKNINY
                     NGKNYGFQLTPASHMKIGNKNIFVKEYNGKGICCASTRESKHIANMWLSKVVDDEGKE
                     IFSGIRHGVISAYGLKKNSSERAVAARNKAEELASAALYSRQELLSQALSGKTVDLKI
                     VSTSLLTPTSLTGGEESMLKDQVKALKELNSKRGEPTKLLIRNSDGLLQEVKVNLKVV
                     TFNFGVNELALKMGLGWRNVDKLNGESICSLLGDNFLKNGVIGGWAAEAIEKNPPCKN
                     DVIYLANQIKEILNKKLQKNDNGEPYKLSQRMALLAYTIGAVPCWNCKSGKDRTGMQD
                     AEIKREIIRKHETGQFSQLNSKLSSEEKRLFSTILMNSGNMEIQEMNTGVPGNKVMKK
                     LPLSSLELSYAERIGDPKIWNMVKGYSSFV"
     gene            15186..15548
                     /gene="ipgE"
                     /locus_tag="JNZ89_001242"
     CDS             15186..15548
                     /gene="ipgE"
                     /locus_tag="JNZ89_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgE"
                     /protein_id="HAY8935173.1"
                     /translation="MEDLADVICRALGIPSIDTDDQAIMLDDDVLIYIEKEGDSINLL
                     CPFCALPENINDLIYALSLNYSEKICLATDDEGGSLIARLDLTGINEFEDIYVNTEYY
                     ISRVRWLKDEFARRMKGY"
     gene            15548..16006
                     /gene="ipgF"
                     /locus_tag="JNZ89_001243"
     CDS             15548..16006
                     /gene="ipgF"
                     /locus_tag="JNZ89_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein IpgF"
                     /protein_id="HAY8935174.1"
                     /translation="MSRFVFIFLCFIPYLGRADCWDKAGERYNIPSSLLKAIAEKESG
                     FNKFAVNVNNNGSKDYGIMQINDFHSKRLREMGYTEEMLISHPCLSVHYAAKLLNEFM
                     LMYGRGWEAVGAYNAGTSPKKKKERLKYAEDIYKRYLRIAAESKQNNRRI"
     gene            16015..17130
                     /gene="mxiG"
                     /locus_tag="JNZ89_001244"
     CDS             16015..17130
                     /gene="mxiG"
                     /locus_tag="JNZ89_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiG"
                     /protein_id="HAY8935175.1"
                     /translation="MSEAKNSNLAPFRLLVKLTNGVGDEFPLYYGNNLIVLGRTIETL
                     EFGNDNFPENIIPVTDSKSDGIIYLAISKDNICQFSDEKGEQIDINSQFNSFEYDGVS
                     FQLKNMMEDKSRVHILNGMYNKPSVFFFFAVIVVLIIIFSLSLKKDEVKEIAEIIDDK
                     RYGIVNTGQCNYILAETQNDAVWASVALNKSGFTKCRYILVSNKEINRIQQYINQRFP
                     YINLYVLNLVSDKAELLVFLSKERNSSKDTELEKLKNALIVEFPYIKNIKFNYLSDHN
                     AREDAKGIFTKVNVQYKEICETNKVTYSVREELTDEKLELINRLISDHKNVYGDQYIE
                     FSVLLIDDDFKGKSYLNSKDSYVMLNDKHWFFLDKNK"
     gene            17138..17389
                     /locus_tag="JNZ89_001245"
     CDS             17138..17389
                     /locus_tag="JNZ89_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscF/YscF/HrpA family type III secretion system
                     needle major subunit"
                     /protein_id="HAY8935176.1"
                     /translation="MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNP
                     QLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR"
     gene            17402..17695
                     /gene="mxiI"
                     /locus_tag="JNZ89_001246"
     CDS             17402..17695
                     /gene="mxiI"
                     /locus_tag="JNZ89_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner rod protein
                     MxiI"
                     /protein_id="HAY8935177.1"
                     /translation="MNYIYPVNQVDIIKASDFQSQEISSLEDVVSAKYSDIKMDTDIQ
                     VSQIMEMVSHPESLNPESLAKLQTTLSNYSIGVSLAGTLARKTVSAVETLLKS"
     gene            17701..18426
                     /locus_tag="JNZ89_001247"
     CDS             17701..18426
                     /locus_tag="JNZ89_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscJ/YscJ/HrcJ family type III secretion inner
                     membrane ring protein"
                     /protein_id="HAY8935178.1"
                     /translation="MIRYKCFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHN
                     ITARKVDGGKQGISVQVEKGTFASAVDLMRMYDLPNPERVDISQMFPTDSLVSSPRAE
                     KARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNISSKPMHISVIAIYDSPKESE
                     LLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPVKEIKSEFLTNEVIYVFLG
                     MAVLVVILLVWAFKTGWFKRNKI"
     gene            18423..18950
                     /locus_tag="JNZ89_001248"
     CDS             18423..18950
                     /locus_tag="JNZ89_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion apparatus protein OrgA/MxiK"
                     /protein_id="HAY8935179.1"
                     /translation="MIRMDGIYKKYLSIIFDPAFYINRNRLNLPSELLENGVIRSEIN
                     NLIINKYDLNCDIEPLSGVTAMFVANWNLLPAVAYFIGSQESRLINHSEMVISYYGGK
                     ISKQGEAAIRSGFWHLIEWKENISVGIYERINLLFNPIALEGNYTPVERNLSRLNEGM
                     QYAKRHFTGIQTSCL"
     gene            18892..19587
                     /locus_tag="JNZ89_001249"
     CDS             18892..19587
                     /locus_tag="JNZ89_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MxiN"
                     /protein_id="HAY8935180.1"
                     /translation="MKVCNMQKGTLPVSRHHAYDGVVIKRIEKELCKTIKDRDTESKK
                     KAICVIKDATKKAESLRIDAVCDGYQIGIQTAFEHIIDYICEWKLKQNENRRNIEDYI
                     TSLLSENLHDERIISTLLEQWLSSLRNTVTELKVVLPKCNLALRKKLELDLHKYRSDV
                     KIILKYSEGNNYIFCSGNQVVEFSPQDVISGVKIELAEKLTKNDKKYFKELAHKKLRQ
                     IAEDLLKENPVND"
     gene            19580..19987
                     /locus_tag="JNZ89_001250"
     CDS             19580..19987
                     /locus_tag="JNZ89_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mxi-Spa secretion machinery protein MxiL"
                     /protein_id="HAY8935181.1"
                     /translation="MINQINASNALQQRLNSEEFVNLNERLSSSQSFDENIIYEIMQY
                     FSQSELNSIDNDELHNKIEQLFNSRFPYLTAAQKSSLLNKLIDANQYVDLHEGFYASL
                     SIYNNIDFYIKTTTFDSLISVFEAGREADDSTW"
     gene            19971..20399
                     /gene="mxiM"
                     /locus_tag="JNZ89_001251"
     CDS             19971..20399
                     /gene="mxiM"
                     /locus_tag="JNZ89_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858276.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system pilotin MxiM"
                     /protein_id="HAY8935182.1"
                     /translation="MIRHGSNKLKIFILSILLLTLSGCALKSSSNSEKEWHIVPVSKD
                     YFSIPNDLLWSFNTTNKSINVYSKCISGKAVYSFNAGKFMGNFNVKEVDGCFMDAQKI
                     AIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIRGI"
     gene            20529..21161
                     /gene="mxiE"
                     /locus_tag="JNZ89_001252"
     CDS             20529..21161
                     /gene="mxiE"
                     /locus_tag="JNZ89_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional activator MxiE"
                     /protein_id="HAY8935183.1"
                     /translation="MEGFFFVRNQNIKFSDNVNYHYRFNINSCAKFLAFWDYFSGALV
                     EHSHAEKCIHFYHENDLRDSCNTESMLDKLMLRFIFSSDQNVSNALAMIRMTESYHLV
                     LYLLRTIEKEKEVRIKSLTEHYGVSEAYFRSLCRKALGAKVKEQLNTWRLVNGLLDVF
                     LHNQTITSAAMNNGYASTSHFSNEIKTRLGFSARELSNITFLVKKINEKI"
     gene            21148..22848
                     /gene="mxiD"
                     /locus_tag="JNZ89_001253"
     CDS             21148..22848
                     /gene="mxiD"
                     /locus_tag="JNZ89_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system secretin MxiD"
                     /protein_id="HAY8935184.1"
                     /translation="MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDT
                     VGSFFERFSALLNYPIVVSKQAAKKRISGEFDLSNPEEMLEKMTLLVGLIWYKDGNAL
                     YIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTFYISGPPALVE
                     LVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGVATVVERLL
                     NNGKALSNRQAKNDPMPPFNITQKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSIL
                     VKGNDQQIQIIRDIITQLDVAKRHIELSLWIIDIDKSELNNLGVNWQGTASFGDSFGA
                     SFNMSSSASISTLDGNKFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVS
                     LVGERNSSLEHVTYGTLINVIPRFSSQGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
                     EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFKYKTRNISN
                     IVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSLVSYLNY
                     "
     gene            22867..23934
                     /gene="mxiC"
                     /locus_tag="JNZ89_001254"
     CDS             22867..23934
                     /gene="mxiC"
                     /locus_tag="JNZ89_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system gatekeeper subunit
                     MxiC"
                     /protein_id="HAY8935185.1"
                     /translation="MLDVKNTGVFSSAFIDKLNAMTNSDDGDETADAELDSGLANSKY
                     IDSSDEMASALSSFINRRDLEKLKGTNSDSQERILDGEEDEINHKIFDLKRTLKDNLP
                     LDQDFIDRLKRYFKDPSDQVLALRELLNEKDLTAEQVESLTKIINEIISGSEKSVNAG
                     INSAIQAKLFGNKMKLEPQLLRACYRGFIMGNISTTDQYIEWLGNFGFNHRHTIVNFV
                     EQSLIVDMDSEKPSCNAYEFGFVLSKLIAIKMIRTSDVIFMKKLESSSLLKDGSLSAE
                     QLLLTLLYIFQYPSESEQILTSVIDVSRASHEDSVVYQTYLSSVNESPHDIFKSESER
                     EIAINILRELVTSAYKKELSR"
     gene            23947..26007
                     /gene="mxiA"
                     /locus_tag="JNZ89_001255"
                     /gene_synonym="virH"
     CDS             23947..26007
                     /gene="mxiA"
                     /locus_tag="JNZ89_001255"
                     /gene_synonym="virH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiA"
                     /protein_id="HAY8935186.1"
                     /translation="MIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLN
                     IVLAILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVDADAGKIITTF
                     GQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK
                     AGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAIAGIIIIFVNLIGGISVGMSQ
                     HGMSLSGALSTYTILTIGDGLVSQIPALLISISAGFIVTRVNGDSDNMGRNIMSQIFG
                     NPFVLIVTSALALAIGMLPGFPFFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYT
                     GTFDIDNSHDSSLAMIENLDAISSETVPLILLFAENKISANDMEGLIERIRSQFFIDY
                     GVRLPTILYRTSNELKVDDIVLLINEVRADSFNIYFDKVCITDENGDIDALGIPVVST
                     SYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIFGIQETKNMLD
                     QFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPREKDVIT
                     LVEHVRASLSRYICSKIAVSGEIKVVMLSGYIEDAIRKGIRQTSGGSFLNMDIEVSDE
                     VMETLAHALRELRNAKKNFVLLVSVDIRRFVKRLIDNRFKSILVISYAEIDEAYTINV
                     LKTI"
     gene            26020..26421
                     /gene="spaK"
                     /locus_tag="JNZ89_001256"
     CDS             26020..26421
                     /gene="spaK"
                     /locus_tag="JNZ89_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone SpaK"
                     /protein_id="HAY8935187.1"
                     /translation="MSNINLVQLVRDSLFTIGCPPSIITDLDSHSAITISLDSMPAIN
                     IALVNEQVMLWANFDAPSDVKLQSSAYNILNLMLMNFSYSINELVELHRSDEYLQLRV
                     VIKDDYVHDGIVFAEILHEFYQRMEILNEVL"
     gene            26425..27717
                     /locus_tag="JNZ89_001257"
     CDS             26425..27717
                     /locus_tag="JNZ89_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HAY8935188.1"
                     /translation="MSYIKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNE
                     IIARAQVVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEV
                     TDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEGQRMGIFAS
                     AGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYLKNSEKKSRCVLVYATSDY
                     SSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPV
                     SVFDSLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLA
                     QKGQFPAIDSLKSISRVFTQVVDEKHRIMATAFRELLSEIEELRTIIDFGEYKPGENA
                     SQDKIYNKISVVESFLKQDYRLGFTYEQTMELLGETIR"
     gene            27810..28148
                     /gene="spaM"
                     /locus_tag="JNZ89_001258"
     CDS             27810..28148
                     /gene="spaM"
                     /locus_tag="JNZ89_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface presentation of antigens protein SpaM"
                     /protein_id="HAY8935189.1"
                     /translation="MEALDKRIIYFLQLENDLEPVGAQSVSQLFNTRRKIAIVKKHII
                     QYQSERILLKGRIEEIQKDIDEANASKRKLLHKESKICKRIGLIKRNNFAKQLILDEL
                     SQEDMKYGIR"
     gene            28135..29013
                     /gene="spa32"
                     /locus_tag="JNZ89_001259"
     CDS             28135..29013
                     /gene="spa32"
                     /locus_tag="JNZ89_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle length
                     regulator Spa32"
                     /protein_id="HAY8935190.1"
                     /translation="MALDNINLNFSSDKQIEKCEKLSSIDNIDSLVLKKKRKVEIPEY
                     SLIASNYFTIDKHFEHKHDKGEIYSGIKNAFELRNERATYSDIPESMAIKENILIPDQ
                     DIKAREKINIGDMRGIFSYNKSGNADKNFERSHTSSVNPDNLLESDNRNGQIGLKNHS
                     LSIDKNIADIISLLNGSVAKSFELPVMNKNTADITPSMSLQEKSIVENDKNVFQKNSE
                     MTYHFKQWGAGHSVSISVESGSFVLKPSDQFVGNKLDLILKQDAEGNYRFDSSQHNKG
                     NKNNSTGYNEQSEEEC"
     gene            29007..29888
                     /gene="spaO"
                     /locus_tag="JNZ89_001260"
     CDS             29007..29888
                     /gene="spaO"
                     /locus_tag="JNZ89_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000944309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein SpaO"
                     /protein_id="HAY8935191.1"
                     /translation="MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLT
                     SVCGDWVIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKITF
                     RITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEFCLGSSNVRLA
                     TLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKINLSESNGESDHTEVSLAL
                     FNYDDINVKVDFILLEKKMTINELKMYVENELFKFPDDIVKHVNIKVNGSLVGHGELV
                     SIEDGYGIEISSWMVKE"
     gene            29893..30543
                     /gene="spaP"
                     /locus_tag="JNZ89_001261"
     CDS             29893..30543
                     /gene="spaP"
                     /locus_tag="JNZ89_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaP"
                     /protein_id="HAY8935192.1"
                     /translation="MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQ
                     QVPSNMTLNGIALIMALFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLIEYKQY
                     LKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLPAYALSEIKDAFKIGFYLYLP
                     FIVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA"
     gene            30558..30818
                     /gene="spaQ"
                     /locus_tag="JNZ89_001262"
     CDS             30558..30818
                     /gene="spaQ"
                     /locus_tag="JNZ89_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaQ"
                     /protein_id="HAY8935193.1"
                     /translation="MSDIVYMGNKALYLILIFSLWPVGIATVIGLTIGLLQTVTQLQE
                     QTLPFGIKLIGVSISLLLLSGWYGEVLLSFCHEIMFLIKSGV"
     gene            30818..31588
                     /gene="spaR"
                     /locus_tag="JNZ89_001263"
     CDS             30818..31588
                     /gene="spaR"
                     /locus_tag="JNZ89_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858288.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaR"
                     /protein_id="HAY8935194.1"
                     /translation="MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIR
                     IPVIFLVASGLITSGKVDIGSSVFEHVYFLMFKEIIVGLLLSFCLSLPFWIFHAVGSI
                     IDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILESIQLSYNICPL
                     FSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLLGVLSRFAPQMNAFSVSLT
                     IKSLLAIFIIFICSSTIYFSKVQFFLGEHKFFTNLFVR"
     gene            31595..32623
                     /gene="spaS"
                     /locus_tag="JNZ89_001264"
     CDS             31595..32623
                     /gene="spaS"
                     /locus_tag="JNZ89_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     switch protein SpaS"
                     /protein_id="HAY8935195.1"
                     /translation="MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISF
                     FSLSDVMLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQTKF
                     VLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYFFWINDRKIIF
                     SQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKRE
                     YIEQEGHFETKSRRRELHIEILSEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPF
                     ISLIETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVW
                     LEQVENTH"
     gene            32636..32878
                     /locus_tag="JNZ89_001265"
     CDS             32636..32878
                     /locus_tag="JNZ89_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935196.1"
                     /translation="MCYMGVNFCNKIGIDQSEFEIESSIINSIANEVLNPISFLSNKD
                     IINVLLRKISSECDLVRKDIYRCALELVVEKTPDDL"
     gene            complement(33455..>34059)
                     /locus_tag="JNZ89_001266"
     CDS             complement(33455..>34059)
                     /locus_tag="JNZ89_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HAY8935197.1"
                     /translation="RETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRA
                     TTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGY
                     AMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQSGLKTSMSR
                     KGNCYDNAPMEIFWGTLKNESLSHYRFKSRDISSAYGKTD"
BASE COUNT        10585 a         5009 c         6833 g        11632 t
ORIGIN      
        1 ttgttgactg cctgtgcggc atctggtatc aaggtggcgt gaagccggtt caggttctca
       61 tgcggaacgt tggaacctat atccccccga taccaaaggc gaaatgtaag tgacaaaatg
      121 caatgaacac gttctccgtt aactgaggag catggtgata aataaaggta aatgcagaag
      181 gtgtagagtc tcgcagattt ctgacatcat agtgcctaac attagatgca taacgctaca
      241 gattgtagaa tctctacagg tgaaatatac actggttggc gtttatgtcg caaaacatgt
      301 cattcaggtt catctcacca ataaggatat gagtgaagtg gaggataagt gagtctgctg
      361 tcagagtttt ctggtgtatg tcagtaactg cgaaccatgt ctgcttgata tgggagctta
      421 tggaggctct ctgtacaagg ttagggagct aacaaagcag ggataaaaag tccgcctgat
      481 gcaggcacgg ttcgttaaat cttttgccat tggtaacaaa atggtgcgat gaatgttcag
      541 gctatcttta tcttgatggt ggttcagctg tttggtaaag aaatcgctgt aacaatagaa
      601 gaactgcagg cagtactggt cccacatcgt ttgctcagtc aactggtgaa gttccgtagc
      661 gcgtaaatta atgctttgca tgaaacgtta ctggagtgga tgaaagaata cctgcatata
      721 tcattactgc gttggattac cagtacaaca gattgaatga actggacatg ttgatagacg
      781 gcattgaaaa gcagcttata agcatagtgc ggcagagtta attggagagc acttcgcctt
      841 ctgagtatta agtaatcatg gtggtacctg cggatactat ctattcactg tgctcggtcg
      901 gcagccttac tgaccaagga gttgggggag ttgataacaa agttgaaaaa acagctctca
      961 accaaggtgg ttattgtaac aatagcaaat aagctggtgt gacctgtatc acaataaccg
     1021 attatggacg taaatacgac aaaaatatgt cagtatcagg cggtattaat tgctgatgct
     1081 gatggacatt aactcttaat aaaagggtgg atgctgaaag gttgttatgg tgacggacgt
     1141 gatgacgacg gaaaagagta tgaggttttg gatttaaagt tcgttcgggg aataaggacc
     1201 cggtcagcta attctcatag tagttcgcat tgctggatgc aatactgtgc tgcaattact
     1261 cgtcgatgtc ggaacaacgg aagccttgca aacggggatg tattcataca ggtgttatgt
     1321 tatatggggt tttattgcag ggggctatac caagagaata tatgatatct catcagactg
     1381 atgtgagggt aaatgagaat agagtaaacg aacaaggttg ttttttggcg aggaagcaga
     1441 tgtatgacaa ttcttgtgga gctgccagtt tactctgtgc tgcaaaggaa ttaggggttg
     1501 ataaaatacc acaatacaaa gggtctatgt ccgaaatgac aaggaagagt tctcttgatt
     1561 tggataatcg ttgtgagcgg gatttatact taataactag tggtaattat aatccgagaa
     1621 tacacaaaga taatatcgcg gatgccggtt attctatgcc tgataagata gtcatggcta
     1681 cgaggcttct tggattgaat gcttatgtcg ttgaagaaag taacattttt tcgcaagtaa
     1741 ttagttttat ttatcccgat gcaagggact tattaattgg catgggatgt aatatagtac
     1801 atcaacgaga tgtgttatct tctaaccaaa gagttttgga agctgttgct gtatccttta
     1861 ttggagttcc tgtcggcctc cactgggtgt tgtgtagacc tgatggaagc tatatggatc
     1921 cagctgtagg agaaaattat tcttgttttt caactatgga attaggtgca agaagaagta
     1981 attctaactt tataggatat actaaaatag gtatttccat agttataact aatgaggctt
     2041 tgtaaattgt cgttttttat ctgtgaagga gcttgaatat tttggggcgg gggcataaca
     2101 aatgatatta ctgagtacaa atttagctat attgggcgga ttagttgtgt gggaagatga
     2161 aatgtttctc ttgaaataag tgaactccct caaggaatga ttgtgtgctt aaatatttaa
     2221 gtgctggtaa gtttgagaag gctgacatat tttgcagagc aaacagtgat tgacttggat
     2281 gatattttta ttttagtcac tcgttgtaat tggagtatgc tttattttat ttgaaaatag
     2341 atgtatttta tacccgcaat ttaaactgta agccctatga ggggtatgga tattataagt
     2401 tactctttga ctaagcataa cttttggggt tagaaaaata aatctcttgt taataattaa
     2461 tatgatttta aaatcaaact tgtttataat tataaaatca tgtaagtcgg tcattttatg
     2521 ggaagattag gagaataaaa cagtaattat atttgagaaa tctgctaata tattcttaaa
     2581 gcttttttga tactgtgaac gaagtctgtt aatggtggat tttttgttta tcaccatgta
     2641 aaaaattgag tagtaaaagc gttgactgct aatcctcgct gtttttattg aaacgattaa
     2701 aaatacgctg aatattttcg gccagtcact catcttcaca taaaattttg accatcatgc
     2761 cgcatccctt agttgcacaa ttcattttca atgatatgaa tattactaat ttcaccagat
     2821 aatgttctcg tggtcagcag ggtatgagtt ttcaccgtaa ttttaaggaa acacagtgcg
     2881 tggggattga ataacagata gccgacggaa ttaccccacc ggctgaaagt caagttcaac
     2941 gaagattttt attatctgaa ttgggcagtt tacatcagtg ttcgatgttt atgaagacga
     3001 tagatggcga gaaattatat ctcgaatagc ttcatctatt tctctctgaa ctgttttgtt
     3061 tattttagat aatgtaaata ttagagttct gtttgtttta ttctcttttc tttttatgta
     3121 agtccgtttg tctttagaaa taaataacga gtcaactttt agcgaagggt tttgctttct
     3181 gtttttgctt ttctttatga tgtttaaaat ttctttttta tatatgtccg ggggcaaatt
     3241 tgtatcaagg tcttttattt cttcctttaa tattggtagt gtagaactaa gagattcatt
     3301 agccttttca agtcctttat aataattgaa taatatcttg tagtcattaa agttaagttc
     3361 tgacgcgatt ggaaatagag atattatttc ctgtggaacg cttgctgcct gaaaggcacg
     3421 agtgactttc gcgcgagaca gattctcttt tttggctatg tctttatagg acatccctga
     3481 tactttcaga aaattaagac caataccaag ttctcggatg ctatgctctt ttgctgtttg
     3541 tatatcgttt gctagttttc tggcatcaag agtagatata tattcttttg aatatagaac
     3601 ttcaagatct gctcctgcat atattgcaga tgctcttcta cgagtgccat ccagaatttc
     3661 aattctacca tcaatctccc ttcctattac agggaagaat tgttgtagct ttatagtttt
     3721 tatgatatcg gctaatgatt cttctgttag ggattcttga tcgcgtacat tcgttttttg
     3781 gttgacgaag gttaaatctt ggatcctttt atgaggaatc ttggctttga taaaggaaac
     3841 tttattacca gaatggagtg taaactcttt cttttggcct tcctttatac ttaacaagtc
     3901 gttgcacaaa tccaccatat cacaccctgt ttattcatat tgatttatat tgacaaaagt
     3961 taaatgcagt gtgagcaaga ttgtatgtaa ctgttgatga tagtcaacgg tagtcttaaa
     4021 aattactatt ttaatagctg gattgatgca atttatcttt attggataaa agaataatat
     4081 tcttgtggag ctctgatgtg agagctccat agatgaaaaa atgcttatca attactatat
     4141 tgattttgta ctatttttga ctacagaaat aagatctcca atagtaataa tgtgttctaa
     4201 tgcagattca tctatacgta gattgaactc aaaactaatc atatccagca tttcaatcag
     4261 agaaagagaa tcggcagaaa gatcttcaat aaatttagtt tcttcagata gtttgctgta
     4321 cgctatacca tagcaaaagg ccactattga taatattttt tcttttatca tattttaatc
     4381 cttattgata ttctttaata cttttgatag ggaagtggtt acatcttttg ctgctttata
     4441 tatattattg ttttcagctg taatatcatt gttatttttt aaatcagata tatcatctgt
     4501 aagtaattct gcagaggtat cgtcaatttt tgacaatacc ttgctgaggg cgctagatac
     4561 ttcttttgcc ttttcataga tcgcatgatt tttatcaatt gtatctgcgt tggtttctgt
     4621 tacgtagttt attgtatttg catctgtaac ttttaatttg ttgtttattc tgtgttctgt
     4681 tgtggatttt gtaatgtcct ttgatttttc ctgtaactct cgttcttgtg ttcctgattt
     4741 agttccaatg agagatataa gattacttag ggagtttgtt actttttttg aagcttcaaa
     4801 tatcgtttcc cgtgttaaat atgtgtctcc atttcttgat aaaaaatcag tctgaagtac
     4861 ttttgaatca gtgtttgagt tgaatttatt gatttgcgaa gctactctat gagaaagaga
     4921 agcgctactt ttagttgtat ctgatgagtt atcattactg cttgtcactc cttccgggtg
     4981 gagagggggg gtggttgaag agttctgtat gttcagaggc ctgtgtcccc gagaaagaga
     5041 gttatttgta gatctttctt gactactcgt agttaacagg tctgaaccta ttccatccga
     5101 attatctgga gtatggttga aaaccttttc taaagctgaa ttatttgcaa atgtctggac
     5161 agcatctgat atagagtgtg gtagaacgga agttactttt tgaactagtg ctctttgtgg
     5221 atttagtaat gagtttccgt tacgggataa tagatcgttt gtctgagaag taggagactg
     5281 tgcatcattt tctgggttct cgtgatagct attgtcatat actctgttgt caaaaactct
     5341 attatcgtaa gttctattat cattatttat atgatagtga attacaggtt gggatgtttt
     5401 ctcattggct ccgggggttg gtccgccatc tggcatatct tcgggaggtg tagggaggcc
     5461 atcttggata ggatgcgaat cttttatatc ttctaaaata tcattaagga cttttctcaa
     5521 cagctcagga aacacggcta ctgtatttaa gtctcttgac agtttaccta taccaaatcc
     5581 tttactatca atagtatttt tacgttgatt gcgcaaacta tcaaaggcaa gttttgcctg
     5641 tgcgtcaact aaatcatcta gtttgagaga tgaaacagtt tcattactta actttaattc
     5701 agcaagaata ttattcttga taaatgatga tacttcagta ttgaggagtt tttgtcccaa
     5761 tgataaagct tcaccagatg tgtgttgttg tgctaatagt gcaagtctgt gctcaatgtt
     5821 ttgtcgtaat tgatggagtt tcttattctt tgccgaccat ggtccaaagg cagaatcttg
     5881 ggataattta tcttttataa ttagttccga atactgtgcg acaatttttt gaagtccctt
     5941 ttcgttttca aaattaagat cattttgatg tactaaggag tacaaaacat ttgaaaattc
     6001 gagaatctcg cttttggcat acgcattcat tgagttggaa taaatgcttc ttaacacatc
     6061 ttctttccct gaggaagaaa ataaaaaatc aagacatttc tgattaaaag acgttgcaaa
     6121 gttttctttt tcagacactg atgctggtgt ttttagagaa gtttgcgaac tatggatatc
     6181 ggatattttg ctttttaact cgctgtattc tgttgatgat ggtgaagttg ccttatataa
     6241 gaatgttggc gcttgagtat tatttacatt atgcatggcg cacctcagaa atggagaaaa
     6301 agtttatctg tatctgtaca tgagcttatt gtactactca aaacctttac taaattatca
     6361 aaaatactat tggcattact gtatttttga actaaagttt gaagattatt tttcattgtt
     6421 tcatcttcgg cagagaatcc ggcattccat gcctgatatt ttgcattatc tagcacaacc
     6481 tcgccatttc cacctagatt atctaagctt tttaacatat tgtctattgg ggtcatgttt
     6541 atattgacaa catatccccc gtttttttca gataccttgc cgattgttcc acctaattct
     6601 gtaagccatt tatttgcttg ttccttacta acagtattat ttgctggata tagcggttta
     6661 tctttatatt tttccttgag ctttgtcaat tcgtctttaa gcgatttgac ttgtaatttc
     6721 acggagtttc cgtcgttacc tccgggagag atccagccgg caagactgga aagaacagcg
     6781 ctaaaatctt gatacatttg agtatatgaa ctaacggcat gttcatatac tttcagatac
     6841 tgttcattaa tattattgat tgactttgca attttatccc acagttctct gtgagatatc
     6901 atttcatatc catcaagctc ggcttctttc ggggctgaat gtaataattc tcttgcgtct
     6961 ttattaattg gatattcttt cttggaaaga atatccaata gttgagcgga tttgtttaca
     7021 tccatgctaa tctgagatga atgtaatgct atttcttcta gcgatgtttt agtcaacgtt
     7081 ttttgtgaga gatctttctt taatgcctga tttgttgttc tgatattatg aagggtgtcg
     7141 ttgagcatag taagggaact tacaggatga gaactggtcg ttgtttttat atcagaatta
     7201 actgtttcgg ttgatgaacc gttggtattg tttgggctga atgatgaggt ggaaatacta
     7261 ttagtcagag ttgttatatt catggttatt tccttatagg aagagccata tattattatg
     7321 gctcttggat atattaagct cgaatgttac cagcaatctg actggctgta gaattccttg
     7381 attggttgat gttgtcaatt atattcaata atttttgtat taattgattt gtcgcttggg
     7441 atgcttcttt agatacttgg gatgcttcct ctgcttgttt actgctggcc tgactgatta
     7501 gttgttcttc ttcttcaaga gcagatgtat aacgccctcc tgatgtggat atattaccag
     7561 caacggctga tgtctccatt gttgcacggc caatgttttg tttttgctga gcagaaaggg
     7621 tattgagctc gtaagctctt ctctgggtgt caattttatc ctgcaaagaa atatcgggag
     7681 aactaagaga agttttatgt tcagttgaca gggatatatt atctggtgcc agtttatttt
     7741 tacctaaaat ttttgtgcta gagttagttt gtggtgaggt gatatttgta tctatttgtt
     7801 tatttaaccc taatttagaa cctgcaagct ctttttcaag agattgagca gtggcaaggt
     7861 tctttcttaa ggctcctttt tgttcgctaa tccctgaatg cgtttttttg gcaccgatac
     7921 ccgttatacc tacttgtgtg accgctccag taatgcttga tgatagggct gctaggcctt
     7981 gccgaacaat gttctctgca gctgattttg tagcatcgaa cgcaatcaat gacaattgag
     8041 agcccaatct agtttctgca gtgcggagag cagaaagtag aacggctaca ctaataatta
     8101 aagaaacagc attagaagaa agactggaaa tatccagggt gttctctggg gtaattgtgt
     8161 gactcatttc tgaaagatct ttcatctttt tgtcagtaag gcgagcaatg atttctgaat
     8221 catgctgaac ctgctctgat aactttaaaa gttgatcatc atttaatgta gttgttaata
     8281 cgggattttt accgacatta agtggaatat gtgctgctaa ctgctgataa ttttgtgatt
     8341 tttgtgtttc ggaagaactt tgagtttgtt ttgtagatat atctgtatat aaaatcgggg
     8401 ctgattttgt gttttgaatt tccataacat tctccttatt tgtatcaagc agtagtttgt
     8461 tgcaaaattg cttttgcaac atcagttcta ttagcctgag agttggacat tgaggctaac
     8521 agctctgcaa ttacttcctg caattggccg aatttttcta ttgcgtcacc gatgtatttt
     8581 gacagttgtt caacttgata tttcgataat gtcaggtctg ctagattttt cgacgcgttg
     8641 ttttggaaaa cagcagaagc gacatttcct cccgcttgtg tggcagagtt aacactttct
     8701 cctaataaaa ctgcttggtt taaatgggtg gaaataattt gtttggatat tacttcatca
     8761 cccgctgcac caagaaattt atttaatctg gcaacagcat tagtgattaa atcgtccagt
     8821 tgagaagaaa aattcttgag aaactttggt ataaggtctg tgagggtttt acctattatt
     8881 ttgccaatat tctctgcaag ttttgctgct gcctgtttac caacagtggc tacgagaacg
     8941 actgctgcaa ccaagacaag agcgcctgcg attgccccca gaatagagcc aatcattttg
     9001 gcttttttcg agtcgacgcc caagccttcg agcatttttg taaatgcatc tgaaaggagt
     9061 ttgattaagg gttcaatgac tgctttcatg atcggattca gggcttgttc catgaaggaa
     9121 ttgccggtcg ctgcttgtac tatagcatcc gtaaccataa gagctaaacc aacagctgcc
     9181 agtgctagag atgctcctcc agaaaaagct gctgcaacaa cactaacgat agttaaaagt
     9241 gccccaagta ttttcccaac acaacccatt actctgttga gttcttctgc tttacgtact
     9301 tcagcagcat actcatcaga ttttctctcc atttcagttt ttcttgattc ttggagagac
     9361 tggaatagag ccagatcatt ttttaaagat tcttcattat tttttccaac tagttgaata
     9421 aaggttgcca tcaattgagt aacactggca agtccggtta atgatttctg ctgggttgat
     9481 agctgttcag cagatgctgt gtttgaaaat gcagaaaaag agtctatttc tttttcgagt
     9541 tgcattgatt tatctgtaag tttgctatga attgacagag ttttctgctc aatcaatgtc
     9601 ctgtctttaa ctgctgcgtc ttttttgata gtgagttgta tttcttcccg tcttaatttt
     9661 ttattttctg gtgaatctgg ggcgagttcg gataatcttg tttgaatttg gttaatttta
     9721 ttttctaggt cttttatttt tgaatctgcg ttttttagtt tattaatttg tttttcatag
     9781 tctctggtta gtccttcagt ttcagataga agagtattaa ttttatcgga gaattctagg
     9841 tttttttgct gtcttgcctg ttgctgggac ttccaggcag taattttatt tgttaatgca
     9901 gttaaagatt tttcaccaag tatttgaata aggtttccaa ttaaaagcgt tagttgggaa
     9961 cttgcattta atgactttgg tgctttaagt tcagggatta atatattcga agttgagtgt
    10021 gcattagttg tattaatatt tttgttagca gcaagatcag caattgtaag agaaaataat
    10081 ttgttagctg catcatttgc agcctggata gtattgtctc caagctcagt ggaagccaat
    10141 attttggcaa gaggcaaacc agtggttgtg gtgcttacat tatgcataat aattactcct
    10201 tgatatcctg aattgcgtct aagtatgatt gtgcttttat ttttaatttt tcatcattgc
    10261 tgtgttgaat tacgagttcg aagcactctt tggctttcaa gggggctttc aaccgaagct
    10321 ggcattgtcc agtatggaat accggtgtat agtcattttt tcctaatgca aaagcgacag
    10381 cataaaggtc tgctgcttgt tggaactgtt cttttatctg ataaatagct gcgagtccca
    10441 taatgtagtc tacattgtaa aagtcgtata tacataaaaa tctgaagaaa acttcagctt
    10501 cctctattct tcctttgttg taaaagtcat aagcatatga ataaatgtca tccatcatat
    10561 catcaggaat tgcattaata tctttcagtg tagcgccaga gttaattgca tcaattactg
    10621 cagtagagat gctttcattt tcagtgatat ttaaagacat aaggtctcct ttttgtctgc
    10681 attactttaa taagtataag atttaatata aacagattta atttgtattg ctttgacggt
    10741 atacagcctt tagaacctct gcgcttattt ctatttgtaa aacttttgtt gattcattaa
    10801 atattttatc gtagacggaa ctggatacta gatttgtaag atccttcatt tgtgtgttaa
    10861 acaaatccat gtcactgcta taacgtttta aaatctttgc tctgaggcca gatgaggcaa
    10921 tctcgtttag tgctgtatga ctgatagatg tttgtgctga tttttcatca agttttatat
    10981 ccgggaattt tttttcaata gctgcaaata tgtttttttt gttatctgag gtcaaaacaa
    11041 ctccattgtg tatggccatt tcatctatac ttctgtttat cattgaagag acataagagg
    11101 ttcgctcttg gctcatccaa caaaatagtt gattccccga attactatct tttattttgt
    11161 ctatgacgct gtccctgatt ttatttatat tcaccgggca tccaaaattc ttctgaggaa
    11221 agcgttgttt taagttaaaa acagataata ttttctttac aagcttattg tgacttaacg
    11281 aatcaaatga tgggcgagga atcgcgaatt caacctgtgg aagtattttg tttagaattt
    11341 gcatgatacc ccctatatgt tagttcactt ctgaagtgat gtttgcaatg gttagtttaa
    11401 tacaaaataa aaattcgtac aaagattcaa tgagttcatc aggtgaaaga tattttttgt
    11461 agtgtttctt ggtcaaaaca cattgatgag tatcagggag aagacagata gaagaaccat
    11521 aatctctact caaagagtag ttaaggatga gtatgtgttc tggattaata atattttctg
    11581 taaaaagttc atgttcatta agaagtccgg tcaaaaagat gtattcatca ttatctgtta
    11641 tacaaacagg tatttgttct tcgagcaata taaaggcttg atttttatcg ttaaaatcaa
    11701 gctttgcacc tgttatttca taaagtttat catatagttt gcgacacatt tctatggcct
    11761 tctatatatt agaatgagag ttattcaata aaagcttatt gacctgtaat aagtcgtgaa
    11821 tgtaaagttt ggttccaaga tctggcgatt taagagaatt gtaataatca atagttttta
    11881 ttgacttttc gataattact tcttttttat ctgttgctcc ggtttttaat tcgtttaata
    11941 cacgagacat attgctgggt gctgatttta ctaagtatga gtggcaagcg ttgatgaccg
    12001 catcaaagtc ttctgaagat acattttcag taggatgttt gtaaagtgaa attgataaag
    12061 gcttgaatgt ttttggggtg tggataaggt taattttatt gaaactttta agatagctac
    12121 gtcgtaattg agtcaatctg gaaagatcaa aatcagattc aatatacttc attatctcgt
    12181 tataagactg attgagactt tcaatgcgtt gcctaacttt atttgcatac gcgtatacat
    12241 tgttaggtgt agcaaccaat ttaacgtcag ggagtggaaa gtatatttca gaatttcctg
    12301 ctttaagaac attaagtgcc ataccagcac agttttcaga tttactgatt aatttataat
    12361 ttgccaattg tctgaaagca tctgctttct tttggcatat aaattttgac atgtttgttt
    12421 catcaaggcc aaaaaggtta tagctgattt taccatcctt tgttttatta tcacctgata
    12481 atggaatgta tactttatca gcactgaccc cccaataacc ataggggtct tttttttgat
    12541 tagctctggg aaaaaatatt tttttgttgt tattttgatc ttgttttgaa tttaataagt
    12601 ttctaacctc ttggcctgca tcaagtcttt cggctgtttg gtctgaaatc atatttagtt
    12661 tgtcttgttt ataggtatcg acactgtaac ctgagcgttt ttcaaaaagg tagtttattt
    12721 ctgtatcttt tgtaacattc ccgccgggat accagctgag ataggtatga gttggttcct
    12781 gtagtaaatt gttttttata ctgatactgg tatgccctaa atgggttatg cctctatttc
    12841 cccagcaacg aaacactaaa tgtctttcaa gatttttggc tgtaccgatg ccatgaaaac
    12901 tctctgcggt attcaacatt aatttgatgt ctttacctgt aaaagaatgt tgaattgaat
    12961 ttttgactgc ttcataggcg gcaaacgcac tttctgcaga tttttcgcta gctaatgtct
    13021 tgaggaaaag caataaggat ttttgattcg ctagtcgata attttttagt tgttcattta
    13081 atatctgtga atttatcttt gcattaatag tgcttaatgt tctgaaaaag agatccttta
    13141 ggttgaattt ctgtgctacc aatataggtc catgctctgt atcttcaacg cgtataggcc
    13201 cttttgtatt gcttgcgtca atgaaattgc taattttgag aatcatactt tattaactct
    13261 ccattacgtg gtgattgtgg ggatgtaaaa tgtatttgat atataatata ttcaattaat
    13321 aaatttagaa acttgagcct gttaacataa tcaaattttc ttttgctgta cataatatgt
    13381 acctcgtgag catatgtagt gctggtttca tcatgaaatc ccacaagtta aagtgtctga
    13441 tatatcaggc tcggagtgtt atagaaaaag agagaaccct gttgaataag tatctttttt
    13501 gttgtaaaac gaggtacaaa actgcaatca atgccccatt tatgactgag gataattaaa
    13561 tgcacataac taatttggga ttgcatcagg tttcatttca aagcggagat tcctataaag
    13621 gcgcagaaga aaccggaaac caaaaaggtg taagcgtgat ttcatatcaa agagttaaaa
    13681 atggagagag aaataagggg gtcgaagcgc ttaatcgatt atatttacag aaccaaacaa
    13741 gcttaacagg gaaaggcctt ttgtttgcgc gtgacagagc tgcagttttt tacgaggcaa
    13801 taaagttggc aggtggtgat acgtcaaaaa ttaaagccat gatggaacaa ttagatacct
    13861 ataaacttgg tgaagttgat aaaagaaata ttaatgagct taataaagta ataagtgaag
    13921 agataagagc acagctaggc attaaaaata aaaaggaatt gcaatcggaa ataaaacaaa
    13981 tatttactaa ttatttaaat aataagaatt gggaaccgat caacaaaaat attaattata
    14041 atgggaaaaa ttatggtttt caattaacac ccgcctctca tatgaagata gggaataaaa
    14101 atatatttgt caaagagtat aatggaaaag gaatttgttg tgcttctacg agagagagta
    14161 agcatattgc gaatatgtgg ctttcaaaag tggtggatga cgaggggaag gaaatttttt
    14221 cgggtatcag acatggagtt atatcagcct atggattgaa aaaaaactca tctgaaagag
    14281 ctgttgcagc tcgtaataaa gctgaggagt tagcaagcgc agcattatat agcagacaag
    14341 aattattatc acaggctttg tctggtaaaa cagtagattt aaagattgtt tcgacttctc
    14401 ttctgacgcc gaccagttta actgggggag aggagagtat gttaaaagat caggtaaagg
    14461 cattaaaaga gttaaactct aaaagggggg aaccaacgaa attattaatt cggaatagtg
    14521 atggtcttct gcaagaagta aaggttaatc taaaagtggt gacatttaac tttggtgtaa
    14581 atgaattagc gctaaaaatg ggcttaggct ggaggaatgt tgacaagctt aatggtgaat
    14641 caatatgttc tttgttgggg gataatttcc tcaaaaatgg tgtgattgga ggttgggctg
    14701 cagaagctat agaaaaaaat ccaccatgta agaatgatgt gatatatctg gctaaccaga
    14761 taaaagagat tctaaacaag aagttacaaa aaaatgataa tggagagccg tataaattgt
    14821 cacaaagaat ggctctattg gcttatacta taggtgctgt accttgctgg aattgtaaga
    14881 gtgggaagga cagaacaggt atgcaggatg ctgaaattaa aagagaaata ataagaaaac
    14941 atgaaacagg gcagttttct caattaaata gtaaattatc ctcagaagag aaaagattat
    15001 tttctactat tctaatgaat agtggtaata tggaaatcca agagatgaat actggtgtgc
    15061 ctggaaataa agttatgaaa aaattaccgc tatcttcgtt agagctgtct tatgctgaaa
    15121 gaatagggga ccccaaaata tggaatatgg tgaaagggta ttcgtcattt gtataagagg
    15181 aatatatgga agatttagca gatgttattt gccgagcctt gggtatccct tcaattgata
    15241 ccgatgatca agcaatcatg cttgatgatg atgtgttaat atatattgaa aaagaaggag
    15301 attcaataaa tttattatgt cctttttgtg cattgcctga aaatataaat gatcttatat
    15361 atgcgttgag cctaaattac tcagaaaaga tatgtttagc tactgatgat gaaggtggaa
    15421 gtctaatcgc gcgattagat cttaccggga taaatgaatt cgaggatata tatgttaata
    15481 cagaatatta tatttcgcgt gtgcgttggc tgaaggatga atttgcgcga agaatgaagg
    15541 ggtattaatg tcccgtttcg tatttatttt tctgtgtttt atcccatatt tagggagagc
    15601 tgattgttgg gataaggctg gtgaaaggta caacattcca tcgagtttgt taaaagcgat
    15661 tgcggaaaaa gaatccggat ttaataaatt tgcagtcaat gttaataaca atggaagtaa
    15721 agattatggt ataatgcaaa taaatgactt tcattctaaa agacttagag aaatgggata
    15781 tactgaggaa atgctaatta gtcatccatg tctttctgta cattatgcag caaagttatt
    15841 aaatgagttt atgctgatgt atggaagagg gtgggaggct gttggtgcct ataatgcagg
    15901 aacatctccg aaaaagaaaa aagaaagatt aaagtacgca gaggatatct ataaacgcta
    15961 tttgcggata gcagcagaga gcaagcagaa taatcgaagg atataagagg atttatgtct
    16021 gaggcaaaga actcaaatct tgcaccattc aggttattag tgaaactcac aaacggtgtc
    16081 ggggatgagt ttccgttata ttatgggaat aacttaattg ttctcggacg gacgatagaa
    16141 acacttgagt ttggaaacga taatttccca gaaaatatta ttccagtaac agatagtaaa
    16201 tcggatggta taatttattt ggccataagt aaagataata tctgtcaatt tagtgatgaa
    16261 aaaggtgaac aaattgatat caattcacaa tttaactcat ttgaatatga cggagtttct
    16321 tttcaactta aaaatatgat ggaggataaa tcgagagttc atatactaaa cggaatgtat
    16381 aataaaccct cggtgttttt tttctttgct gttattgttg tgttaattat aattttttcc
    16441 ctctctttaa agaaagatga agtaaaagaa attgctgaaa ttatagatga taagagatat
    16501 ggaatagtca acacaggaca gtgcaattat attcttgccg aaacacaaaa tgatgcggta
    16561 tgggcatctg tagccttaaa taaaagcgga tttaccaaat gcagatatat tctggtgtcc
    16621 aacaaagaaa taaatagaat tcaacaatat atcaatcaac gattcccata tatcaatttg
    16681 tatgtgttga atttagtgag tgataaagcg gaattactgg tatttttaag taaagaaaga
    16741 aatagttcaa aagataccga acttgagaaa ttgaaaaatg ctctgatagt tgaatttccg
    16801 tatatcaaaa atattaaatt caactatctt agcgatcata atgcaaggga ggatgctaaa
    16861 ggtattttca caaaggtaaa tgtccagtat aaagagattt gtgaaactaa taaagttaca
    16921 tattctgtca gagaagaact gacagatgaa aagcttgagc tcattaatag actgatttct
    16981 gatcataaaa atgtatatgg agatcagtat attgagtttt ctgtactttt gatagatgat
    17041 gattttaaag gtaaatcata tcttaacagc aaagacagtt atgtaatgtt gaatgataaa
    17101 cactggtttt ttttagataa aaataagtga ggataaaatg agtgttacag taccggataa
    17161 agattggact ctgagttcat tatctgaaac ttttgatgat ggaactcaaa cattacaagg
    17221 gcaactaaca tcggcactaa atgcattagc tgaaaatcct tcgaatccac agttgctggc
    17281 tgaataccaa agtaaattat ctgaatatac attatatagg aacgcgcaat ctaatactgt
    17341 gaaagtgatt aaggatgttg atgctgcaat tattcaaaac ttcagataat agggagcatt
    17401 catgaattac atttatccag tcaatcaggt tgatattatc aaagccagtg attttcaatc
    17461 tcaagagata tcaagcctgg aagacgtcgt gtcggctaaa tatagtgata ttaagatgga
    17521 tacagatatt caagtatcac aaataatgga gatggtaagc catccagaat cattaaaccc
    17581 agaatctttg gccaagttac agacgacgct ctcaaattat tcaataggag tatcattagc
    17641 tggcacgtta gcaagaaaaa cagtttcggc tgttgaaact ttattaaagt cttaatttat
    17701 atgattaggt ataaatgttt tattttattc ttgttgctga tgttgattgg atgtgagcaa
    17761 cgtgaagagt taatttctaa tttatctcaa agacaggcaa atgaaataat atctgtgcta
    17821 gaacgccata atattactgc tagaaaagtt gatggaggta aacaggggat ctcggtacaa
    17881 gtcgaaaagg ggacatttgc atcggcagtt gatttgatgc gcatgtacga tttgccaaat
    17941 ccggagagag ttgatatctc acaaatgttt cctacagatt cattagtgtc ttctccaaga
    18001 gctgaaaagg cccgtttata tagtgctatt gagcaacggc tggaacagtc tttagtttct
    18061 attggtggtg ttatttcggc aaaaatacat gttagctatg atcttgaaga aaaaaatata
    18121 tcttcaaaac cgatgcatat atcagtaatc gctatatatg actcaccgaa agagtctgaa
    18181 ctattagtta gtaatattaa gcgatttttg aaaaacacct tttctgatgt taagtatgaa
    18241 aatatatctg tcatattaac tccgaaagaa gaatatgttt atacaaatgt acaacctgtt
    18301 aaggaaatta aatcggaatt tttaacaaat gaagtaatat atgtatttct cgggatggct
    18361 gtactagttg tcattctttt ggtatgggca ttcaaaacag ggtggttcaa gagaaacaaa
    18421 atatgataag aatggatgga atttataaaa aatatctttc aataattttt gatccagcgt
    18481 tctatataaa tagaaatcgg ttaaatttgc cttctgaact gttagaaaat ggcgtaatca
    18541 gaagtgagat taataatctc ataattaaca aatatgatct aaattgcgat attgaacctt
    18601 taagcggggt aaccgctatg tttgttgcca actggaattt acttccagct gttgcttatt
    18661 ttatcggtag tcaagagtct cggttaatta atcatagtga gatggttatt agttattatg
    18721 ggggcaaaat cagtaagcaa ggggaggccg ctattcgaag tggtttttgg catcttattg
    18781 agtggaagga aaatatatct gttggtatat atgaaagaat aaacttatta tttaatccaa
    18841 ttgctttgga gggaaattat acgcctgtag aaagaaattt gtcccgatta aatgaaggta
    18901 tgcaatatgc aaaaaggcac tttaccggta tccagacatc atgcctatga tggtgttgtt
    18961 ataaagagaa ttgaaaagga attatgtaaa accataaaag atagagacac tgagagtaag
    19021 aagaaagcaa tttgtgttat aaaggatgct acgaaaaaag ctgaatcact gcgtatagat
    19081 gctgtatgcg atggttatca aattggtata cagactgctt ttgagcatat tattgactat
    19141 atttgtgaat ggaagttaaa gcaaaatgaa aacagaagaa atattgagga ctatataact
    19201 agtttgcttt cagaaaattt acatgatgag aggatcatta gcactttatt ggagcagtgg
    19261 cttagttcgt tgcgtaatac agtaacagaa ttaaaagtgg ttttgcccaa gtgtaattta
    19321 gcactgagga aaaagttaga acttgatctc cataaatatc gctcagatgt caagattatt
    19381 ttaaaatatt ctgaagggaa taattatata ttctgtagtg gtaatcaagt agtggagttt
    19441 agtcctcagg atgtaatatc aggtgttaaa atagaacttg cggaaaaatt aacaaaaaat
    19501 gataaaaaat atttcaaaga gttagcacat aagaaactga gacaaattgc agaagacttg
    19561 ttaaaagaga atcctgttaa tgattaatca aataaatgca agcaatgctc tgcagcaaag
    19621 attaaatagt gaagaatttg ttaatttaaa tgagagatta tcatcttcgc aatcatttga
    19681 tgagaatata atctatgaaa taatgcaata tttctcacag agtgaattaa attccataga
    19741 taatgatgaa ctgcacaata agattgaaca attattcaat tcacgttttc cttatcttac
    19801 agctgcacaa aaaagttcac ttcttaataa actcatagat gcaaatcaat atgtcgattt
    19861 gcatgaggga ttttatgcat cattgtccat atataacaat attgatttct atattaagac
    19921 tacaaccttc gattcattaa ttagtgtctt tgaagcaggg agagaggcag atgattcgac
    19981 atggtagtaa taagttgaaa atatttattt taagtatatt gctattaaca ctgagtgggt
    20041 gtgctttaaa gtcatcatct aattctgaaa aagaatggca tattgttcct gtaagtaagg
    20101 attatttttc tattccaaat gatttattat ggtcgtttaa tacaaccaat aaaagtataa
    20161 atgtttactc taaatgtatt agtggtaagg cggtttatag ttttaatgca ggtaaattca
    20221 tgggcaactt taatgttaag gaagtagatg ggtgcttcat ggatgcacaa aagatagcta
    20281 tagataaact attttctatg ctgaaagacg gggttgtttt aaaaggtaat aagataaatg
    20341 ataccatcct tatagagaag gatggggaag ttaaattaaa attaattcga gggatataat
    20401 tgtattgtga gtaaatataa aggtctaaat acaagtaata tgttttacat ttactctagt
    20461 ggacatgaac cagttaacgt tgagcttgta aaagataaag aacgtaacat aattgagctg
    20521 gctccagcat ggaagggttt ttttttgtcc gaaatcaaaa tataaaattc agtgataatg
    20581 tgaactatca ttatcgcttt aacattaata gttgtgcaaa atttcttgct ttttgggact
    20641 atttcagtgg tgctctagta gagcatagcc atgctgaaaa atgtattcat ttctatcatg
    20701 agaatgatct tcgggatagt tgtaataccg aatcgatgct tgataagtta atgttaagat
    20761 tcatcttttc atctgaccag aatgtaagta atgcactggc tatgatacga atgactgagt
    20821 catatcattt ggttctttat cttctgagaa ctattgagaa agaaaaggag gtaagaataa
    20881 agagtctgac agagcattat ggtgtgtcgg aggcttattt tagatcttta tgtagaaaag
    20941 ctttaggggc aaaagtcaaa gaacaactga acacttggcg gttagtaaat ggtttattag
    21001 atgtattttt gcacaatcaa acaatcactt ctgctgccat gaataatggg tatgcatcaa
    21061 catcccattt ttcaaatgag ataaaaacac gactaggctt ttctgcaaga gaattatcga
    21121 atattacttt tttagtgaaa aaaataaatg aaaaaattta atattaaatc tttgactctc
    21181 ttgattgtat tgttaccatt gatagttaat gctaataata ttgactctca tttattagaa
    21241 caaaatgaca tagcgaaata tgttgctcaa agtgatacgg taggatcttt ttttgaacgt
    21301 ttttctgcgt tattaaatta tcctattgtt gttagcaaac aagctgcaaa aaagagaata
    21361 tctggggagt ttgatttatc taatccagaa gaaatgcttg aaaaaatgac attacttgtg
    21421 ggactcatat ggtataaaga tggaaatgca ttatacatat atgactctgg agaattaata
    21481 agcaaagtta ttttgctgga gaatatatca cttaattatc ttattcagta tctgaaggat
    21541 gctaaccttt atgatcacag atatcctata agaggaaaca ttagtgataa aacattctat
    21601 atatctggtc ctccggcatt ggttgaactg gtagctaata cagcaacttt gcttgataag
    21661 caggtttctt ctattgggac agataaagtt aattttgggg ttataaaatt aaaaaataca
    21721 tttgttagtg acagaactta taatatgaga ggggaggata ttgtcatccc aggggtggct
    21781 actgttgtag aacgtttatt aaataatggt aaggctctga gtaacagaca agccaaaaat
    21841 gatccgatgc caccctttaa tattacacag aaagtatctg aggatagtaa tgacttttca
    21901 tttagttcag ttaccaatag ttctatatta gaggatgtat cacttattgc atatccagaa
    21961 accaattcta tattagtcaa aggtaatgat cagcaaatac agattattcg cgatattatc
    22021 actcagttag atgtagccaa acgacatata gaattatcat tatggataat cgatattgat
    22081 aaatctgaat taaataacct tggcgttaat tggcaaggaa cggcttcatt tggtgattcg
    22141 tttggtgcat catttaatat gagctcatca gcatcgataa gcactttgga cggcaataag
    22201 tttattgctt cagttatggc attaaatcag aaaaagaaag caaatgtagt ttcaaggccg
    22261 gtgattttga cacaagagaa tattccggct atatttgata ataacaggac tttttatgtg
    22321 tcattagttg gtgagcgcaa ttcttcgttg gagcatgtta cgtatggaac attgataaat
    22381 gttatacctc gcttttcatc tcagggacaa attgagatgt ctttaacgat agaggatgga
    22441 acaggaaata gtcagtcaaa ttacaattat aataatgaaa atacatctgt ccttccagaa
    22501 gttggaagga ccaaaatcag tacaatagcg agagttccac aaggcaaaag tttgttgata
    22561 ggtggttata cgcatgaaac gaactctaac gaaatagtat ctattccttt tctctcctct
    22621 attcctgtaa tcggtaatgt gttcaagtat aaaacaagga atatcagtaa tattgtaagg
    22681 gtttttctga ttcaaccccg tgagataaag gagtcaagtt attataatac tgcagaatat
    22741 aagagcctca tatctgaaag agaaatacaa aagactacac aaataatccc atctgaaact
    22801 actttgctgg aagacgaaaa atcattggtt tcatacttaa attactaact ataaagtagg
    22861 tgatgtatgc ttgatgttaa aaatacagga gtttttagct ctgcattcat tgataagttg
    22921 aatgcaatga caaattcaga tgatggagat gagactgctg atgcagagct tgattctggc
    22981 ttggctaata gcaagtatat tgactcatct gatgagatgg cttccgctct ttcgtcattt
    23041 ataaacagaa gagaccttga gaaactgaaa ggaacaaata gtgatagtca ggaacgtatt
    23101 ttagatgggg aagaagatga aattaatcac aagatttttg atttaaagag aactttaaaa
    23161 gataaccttc ctctagatca ggattttata gacagactaa agagatattt taaagatcca
    23221 agtgatcaag tcttagcatt aagggaactt ttgaatgaaa aagatcttac tgctgaacaa
    23281 gtcgaatcat taactaaaat tattaatgag ataatatcag gtagtgaaaa aagtgttaat
    23341 gctggaataa attcagctat acaggctaaa ttatttggca acaaaatgaa acttgaacca
    23401 cagcttttgc gtgcatgtta tcgtggtttt atcatgggga acatatcaac aacagatcag
    23461 tatatagaat ggcttggtaa ttttggtttt aatcacagac atacaattgt gaattttgta
    23521 gagcagtcac tgattgtaga catggattct gagaaaccga gctgtaatgc ttatgagttt
    23581 ggttttgtgt tatctaaatt aattgcaatt aagatgatta gaacttcaga tgtaattttt
    23641 atgaagaaac tggaatcctc aagcttgcta aaagatggca gtttaagtgc agagcagcta
    23701 ttgctaactt tattatatat ttttcaatat ccaagtgaaa gtgagcaaat tcttacttct
    23761 gttatagacg tatcacgagc cagtcatgag gattctgtag tgtatcaaac atatctatct
    23821 tctgttaatg aaagtcctca tgatatattt aaaagtgaaa gtgaaagaga aattgcgatc
    23881 aatattctac gagagcttgt cacaagtgca tacaagaaag agctttctag ataacaggag
    23941 atgaaagtga tccagtcttt tcttaagcaa gtaagtacta agcctgaatt aattatatta
    24001 gtgcttatgg ttatgatcat tgctatgttg atcataccat tacctacata ccttgttgat
    24061 tttttaatag ggcttaatat tgtacttgct attctcgttt ttatgggatc attttatatt
    24121 gaaagaatat tgagtttttc tacattccct tcggttttgt tgataacgac attatttcgt
    24181 ctcgctttat caataagtac tagtcgacta attttagttg atgcggatgc gggtaaaatt
    24241 attactacat ttggccagtt tgtcattggt gatagtctgg ctgtaggttt tgttattttt
    24301 tcaatagtaa ctgttgtgca gttcattgtt ataacaaaag gatctgaaag ggttgcggag
    24361 gtagctgctc gcttttctct tgacggtatg ccggggaaac aaatgagcat tgatgcggat
    24421 ttaaaggctg gaattattga tgccgcagga gctaaagaaa gacgcagtat tctggaacgt
    24481 gagagtcaat tgtatggttc atttgatgga gcaatgaagt tcattaaagg tgatgcaatt
    24541 gctggcatca ttattatttt tgtcaattta ataggaggta tttctgttgg tatgagtcaa
    24601 catggaatgt ctctatctgg tgcattatct acttatacca tactaactat tggtgacgga
    24661 ttggtctctc agattcctgc tctgttaatt tctataagtg caggatttat cgttacaaga
    24721 gttaatggtg atagcgataa tatgggacgt aacataatgt cccagatatt tgggaatcct
    24781 tttgttctca ttgttacatc agctcttgcc ttggcgatag ggatgttgcc aggttttccg
    24841 ttttttgttt ttttcctgat agcagttact ttgacggctt tattctatta taaaaaggtc
    24901 gtagaaaaag aaaaaagtct gtctgagtct gattctagtg gctatactgg tacatttgat
    24961 attgataata gccatgactc atctttggca atgatagaaa atctggatgc tattagttca
    25021 gaaaccgttc ctttaatttt attatttgcc gaaaataaga taagtgcaaa tgatatggaa
    25081 ggtcttattg aaaggataag aagtcagttc tttattgatt atggtgtcag gcttccaact
    25141 attttatata gaacaagcaa tgagcttaag gtcgatgata ttgttttgtt aataaatgag
    25201 gtgcgtgccg atagttttaa tatatacttt gacaaagtgt gtattacaga tgaaaatgga
    25261 gatatagatg ctctaggtat tcctgttgtt tcaacttcat ataatgaacg tgttatttct
    25321 tgggtagacg tttcatatac agaaaatcta actaatattg atgctaaaat taaaagtgct
    25381 caagatgaat tttatcacca gttgtcacaa gctttattaa acaacataaa tgagattttt
    25441 ggtatacaag aaacaaaaaa tatgttagat cagtttgaaa atcggtatcc tgatctatta
    25501 aaggaagtct tccgacatgt gactatacag agaatttctg aggtattaca aagattgctt
    25561 ggagaaaata tttctgttcg caatttaaaa cttattatgg agtctttggc gctttgggct
    25621 cccagagaaa aagatgtcat aacattagtt gaacatgtcc gtgcatcact ttctaggtat
    25681 atttgtagta aaatagctgt ttctggtgag attaaagttg tgatgctttc cggatatatt
    25741 gaggatgcaa taagaaaagg gataaggcaa acctctggtg gctctttctt gaatatggat
    25801 atagaggttt cggatgaggt aatggaaact ttagcacatg ctttgagaga attgagaaat
    25861 gcaaaaaaaa atttcgttct tttggtatca gtagatatac gtaggtttgt taaaagactt
    25921 atagataaca gatttaagag tatactcgtt atatcgtatg ctgagattga tgaagcatat
    25981 accattaatg tattaaagac tatttagtga ggtttaaata tgagtaacat taatttagtt
    26041 caattagtta gagatagtct tttcacgatt ggttgtcctc catcaattat tacagattta
    26101 gacagccatt cagcgattac catttctttg gatagtatgc ctgctattaa tatagctctt
    26161 gtcaatgagc aggttatgtt atgggctaat ttcgatgcac caagtgatgt aaaacttcag
    26221 tcatctgctt ataacatatt aaatttaatg ttaatgaact ttagttatag cattaatgag
    26281 ctggtagagc ttcatcgttc tgatgagtac ttacagttaa gagttgttat taaagatgac
    26341 tacgttcacg atgggattgt ttttgcagag attctgcatg agttttatca gaggatggaa
    26401 atcttaaatg aggtcttata atcaatgagc tatataaaat tgctcactca attatctttt
    26461 cctaatagaa tctcggggcc aatcttggaa acaagtctta gcgatgtttc gattggtgag
    26521 atttgtaaca ttcaggctgg aattgaaagt aatgaaatta ttgcaagagc tcaggttgta
    26581 ggatttcatg atgaaaaaac aatattaagc ttgattggaa attctcgtgg actttcaagg
    26641 caaacgttga ttaagcccac tgcccagttt cttcatacgc aagtcggccg tggattattg
    26701 ggagcagtag tcaatccttt aggggaggtt actgataagt ttgctgttac ggataacagt
    26761 gaaattcttt atcgacctgt agataatgct cctccgctat atagtgaaag ggctgcaatt
    26821 gagaagcctt ttttaacagg tgttaaggtt attgattctt tactcacgtg tggtgaagga
    26881 cagcgaatgg ggatttttgc gtcagctggt tgtggcaaaa cttttctcat gaatatgctc
    26941 attgaacata gtggtgctga tatatatgtt attgggttaa ttggtgagcg aggtcgagag
    27001 gttacagaaa cggttgatta tttgaagaac tctgagaaaa aaagcaggtg tgttttagta
    27061 tatgcaactt cggattactc ttcggttgat cgttgtaatg ctgcatatat agccactgct
    27121 atagccgaat tttttaggac tgaaggacat aaagtagcgc tttttattga ttcattaaca
    27181 aggtatgcca gagcattacg tgatgtggcc ttagccgctg gagaatcacc tgccagaaga
    27241 ggctatccgg tttcggtttt tgatagctta cccagacttc ttgaaaggcc aggaaagtta
    27301 aaggcaggtg gctctattac tgcattttac actgttcttt tggaggatga tgattttgct
    27361 gatccattag ctgaagaggt aagatccatt ttagatggac atatatattt gagcagaaat
    27421 ctagcccaaa aaggacaatt tcctgcaatt gattccttaa aaagtataag cagggtattt
    27481 acacaggttg ttgatgaaaa acatcgtatt atggccactg catttcggga gctactttct
    27541 gaaatagaag agctaaggac aattattgac tttggtgaat acaaaccggg ggagaatgcc
    27601 tctcaggata aaatctacaa caaaatatct gttgttgaga gttttctgaa gcaagattat
    27661 cgactcggtt ttacttatga gcagacaatg gagcttcttg gtgaaacaat tagataaggt
    27721 tttaaaaatc aaagataaat atcaacggtc tgttaaatta attgaagcac acatattaac
    27781 actaaaaaaa aaactctttg tatcgagatg tggaggcatt agataaaagg attatatact
    27841 tcctgcaact ggagaatgac ttggaacctg taggcgctca gagtgttagt cagcttttca
    27901 atacaagacg taagatcgct atagtaaaaa agcatattat ccaatatcag tctgaacgaa
    27961 ttcttctaaa gggaagaatt gaagaaattc aaaaagatat tgatgaggca aatgcttcta
    28021 aaagaaaact gcttcataaa gagagtaaaa tatgtaaacg gattggcttg attaaaagaa
    28081 ataactttgc caaacagttg atacttgatg agttatcaca agaggatatg aagtatggca
    28141 ttagataata taaacctaaa ttttagtagt gacaaacaga tagaaaaatg tgagaaacta
    28201 tcttcaatag ataatattga tagtctcgtt ttgaagaaga agaggaaggt tgaaattcct
    28261 gagtactctt taattgcatc taactatttt actattgata agcactttga acataagcat
    28321 gataaaggag aaatttatag tggcattaaa aatgcgttcg aacttagaaa cgaacgagcg
    28381 acatattctg atattccaga atcaatggcc attaaagaaa atattttgat accagatcaa
    28441 gatatcaaag caagggaaaa aataaatatc ggcgatatga gggggatctt ttcatataat
    28501 aagagtggaa atgcagacaa gaacttcgaa agaagtcata cttcttctgt aaaccctgat
    28561 aatctgctag aatctgataa tagaaatggt caaattggtt taaaaaatca tagcttgtct
    28621 attgataaga atattgctga catcatttct ttactaaatg gaagtgttgc taaatcattt
    28681 gagctgcctg taatgaataa aaatactgca gacataaccc catccatgtc attgcaagaa
    28741 aaatcaatag ttgaaaatga taaaaatgtt tttcaaaaaa atagtgaaat gacttaccac
    28801 tttaaacagt ggggggctgg acattctgtt agtatttcag tggagtctgg ttcttttgtt
    28861 ctaaaaccgt cagatcaatt tgtaggaaat aaacttgact taattttgaa acaagatgct
    28921 gagggtaatt acagatttga tagcagtcaa cataataagg ggaataaaaa taatagtaca
    28981 ggatataatg aacagagtga agaagaatgc taagaattaa acattttgac gctaacgaaa
    29041 aactacagat tttatatgca aagcaactct gcgagcgttt ttcgattcag acattcaaaa
    29101 ataaatttac aggcagtgaa agtttagtca ctcttacttc cgtgtgtggg gattgggtaa
    29161 ttcgtattga tacattatct tttttgaaaa aaaaatacga ggtattttca ggattttcta
    29221 cacaagaatc tttactgcat ttatcaaaat gtgtctttat agagtcgtca tctgtatttt
    29281 cgattccaga actgtctgat aagattactt tccggatcac gaatgaaatc cagtatgcaa
    29341 ctactgggag tcatttatgc tgtttttcct cttctttagg tattatttat tttgacaaga
    29401 tgccggtatt acgtaatcaa gtttctcttg acttattgca tcatctttta gagttttgct
    29461 taggttcatc taatgtaagg ctggctactt taaaaagaat tcgtactggt gatataatca
    29521 tagttcagaa actttataat ttattattgt gtaatcaagt tattattggg gattatattg
    29581 tgaatgataa taatgaggca aaaattaatc tgtcagaaag taatggtgag tcagatcaca
    29641 cagaagtttc tttggcatta ttcaattatg atgatatcaa tgtaaaagtg gactttatcc
    29701 ttttagaaaa aaagatgaca atcaatgaac taaaaatgta tgtagaaaac gaattattca
    29761 agtttcccga tgacatagtt aaacatgtaa atattaaagt aaatggttct ttggttgggc
    29821 atggggaact tgtttctatt gaggatggtt atggtatcga gattagttct tggatggtaa
    29881 aggagtaatc tcatgctgag tgatatgtcc ctcatcgcta cactttcttt ttttacgcta
    29941 ttaccatttt tagttgctgc tggtacttgt tatataaagt tttctattgt ttttgtaatg
    30001 gtacgaaatg cacttggttt gcagcaggtt ccatcaaata tgactctcaa tggtattgca
    30061 ttgattatgg ctttgttcgt gatgaaaccc attattgaag ctggttatga aaattatcta
    30121 aatggcccgc aaaaatttga tacaatatca gatattgtcc gtttttctga ttctggcttg
    30181 attgaataca agcaatactt gaaaaagcat acagatcttg agttggcacg ttttttccaa
    30241 aggtctgaag aagaaaatgc tgatttaaag agtgcagaga ataatgatta ttcattgttt
    30301 tccctcttgc ctgcatatgc gctaagtgaa attaaagatg cgttcaaaat aggtttttat
    30361 ttatatttgc catttattgt tgttgatctt gttatttcaa gcattttact tgcacttggt
    30421 atgatgatga tgagtccaat cacaatatca gtaccaataa aacttgtatt atttgttgcg
    30481 cttgatgggt gggggatcct gtctaaggcc ttgattgaac aatatatcaa tgttcctgct
    30541 tagatgatgg aggtaatgtg tctgatatag tttatatggg taataaggct ctttatttaa
    30601 tccttatctt ttccttatgg ccagtaggta tagctacggt tattggatta actattggtt
    30661 tattacagac agtgactcaa cttcaagagc agacacttcc ttttggtata aagcttatag
    30721 gtgtctcaat atctttgcta cttctttctg gatggtatgg tgaggtttta ttgtcttttt
    30781 gtcatgaaat aatgttttta attaagagtg gggtttgatg gacatttcaa gctggttcga
    30841 aagtattcat gtgtttttaa tactcctgaa cggcgttttt tttagattgg ctccattatt
    30901 tttctttctt ccatttttaa ataacggtat aatttctcca tctattagaa tacctgtgat
    30961 ttttcttgtt gcatcaggat taattacttc tggtaaggta gacataggtt cttctgtttt
    31021 tgaacatgtt tatttcctta tgttcaagga aataattgtt ggcctccttc tctctttttg
    31081 cttgtctctt cccttttgga tatttcatgc tgttggtagt attattgaca accagcgtgg
    31141 ggcaacgctt agtagttcaa ttgatcctgc caatggtgtt gatacgtctg aattggcaaa
    31201 atttttcaat cttttttctg cagttgtatt tctatacagt ggtggaatgg tctttatttt
    31261 agaatccata caattgtctt ataatatatg cccgttattt tctcaatgtt ctttccgtgt
    31321 ctcaaatatc ttaacatttc tgactttatt ggcaagtcag gctgttattt tagccagtcc
    31381 tgttatgata gtattgttac tatcagaagt attacttggt gtattatcga gatttgctcc
    31441 gcagatgaat gctttttccg tatcattaac tattaaaagt ttacttgcaa tatttattat
    31501 tttcatctgt tcttctacta tttacttttc taaagttcaa tttttcctcg gtgaacataa
    31561 atttttcaca aatctatttg ttagataaaa tattatggca aataaaacag aaaagccgac
    31621 acctaaaaaa ctaaaggatg ccgcaaaaaa aggacagtca tttaaattta aggatttaac
    31681 gacagttgtt attattctgg tagggacatt tactataata tcattctttt ccttaagtga
    31741 tgtaatgctc ttatacagat atgtaataat taatgacttc gaaattaatg agggtaaata
    31801 cttttttgca gtggttattg tcttttttaa gataattggc ttcccacttt ttttctgtgt
    31861 tctttcggct gtgttgccaa cattggttca aacaaagttt gttcttgcga ctaaagctat
    31921 caagattgat ttttcagtat taaaccctgt taaagggtta aaaaaaatat ttagtataaa
    31981 gacaataaaa gaatttttca aaagcattct gcttcttatt attctagcat taacaaccta
    32041 tttcttttgg attaatgacc gaaaaataat tttttctcag gtgttttcta gtgttgatgg
    32101 cttatatctt atttgggggg ggctatttaa ggatataata ttatttttct tagcattttc
    32161 tatttttgtt attattcttg actttgtgat tgagttcatt ttatacatga aagatatgat
    32221 gatggataaa caggagataa aaagagaata tatagagcaa gagggacact ttgagacaaa
    32281 gtcgagaagg cgtgagttgc atatcgagat tctttcagag cagactaaat ctgatatacg
    32341 taattcaaaa ttagtggtaa tgaacccgac tcatattgca attggtattt attttaatcc
    32401 agaaatagcg cctgcacctt ttatttctct cattgaaact aaccagtgtg ccttggctgt
    32461 cagaaaatat gcaaatgaag ttggtatacc aactgtgcgt gatgtgaaat tagctagaaa
    32521 actatataaa acacatacaa aatatagttt tgttgatttt gaacacttgg atgaagtcct
    32581 acgtcttatt gtttggcttg agcaggttga aaacactcat taataagtaa aggagatgtg
    32641 ttatatggga gttaatttct gtaataaaat aggtattgat cagtctgaat ttgaaataga
    32701 atcttccatc attaactcca ttgctaatga ggtattgaac ccaatatctt tccttagcaa
    32761 caaggatata ataaatgttt tactcagaaa gatttcatct gaatgtgacc tggttagaaa
    32821 agacatttat cgttgtgctc ttgagttggt cgttgaaaaa acacctgatg atttataatc
    32881 attcataata actcttttgt tgatataaat atttttgttg aagatattta tgtagtcaca
    32941 ggatcaattg tagaaaattg ttatgttttt gttaggaact gaactaaata atatatgata
    33001 agacagcaaa aacgactgac cataatcctt cttttattag gagttgataa gagagactat
    33061 tcatcctgta atgttaaaac tctgttatat agtattcgcg attatgcaaa gtctgtaaat
    33121 gatcatgaga tactaaccga gagtaatcgt ttattatctc attgcatttc agatagtaac
    33181 ggagctttct ttaaaagtag taaatacgtt ccccttaagt acttacgtaa aaggagaata
    33241 gcacgaaaga taccaaatga ttagcacttt gctagtaagc ttgctggtaa actatattga
    33301 ccgttgggtt tgttttgaga ctgtaattta aattgtgtaa ttgcctgttt ttgatatgtt
    33361 tactccaaca acggagacag gtaaattatg gacgaaaaga agcttaaagc ccttgcggct
    33421 gaactggcta aaggcctcaa aactgaggcc gacctcaatc agttttcccg tatgctgacg
    33481 aaatatcccg gctcttaaaa cgatagtggc tcaggctttc atttttcagc gttccccaga
    33541 agatttccat cggagcgttg tcgtaacagt tacctttacg cgacattgat gttttcagac
    33601 cagactgctc ctgtatgacc cggtaatcgt atgcgcagta ctgtgaacct cgatcagagt
    33661 ggtggattag cccggcaggt gggcgctggc tcctgagcgc cataaacagg gctttacctg
    33721 tcagctcttt tgtcatgcgc tctcccatgg cgtagccgac aatttcgcac gtataaacat
    33781 ctttgatgcc agcgaggtac aaccatccct cctgtgtggc aacatacgtc aggtccgcca
    33841 cccagacctg atttggtgct gtaggagcga acgtctggtt cagcagattt ggcgcaactg
    33901 gcagattgtg gttcgggttc gtagtcgctc tgaacttgcg tttctgctta cagcgtagcc
    33961 ttagctcctt acgaagacgt gccagtcggt cacgaccaac gatgatgcca ttctctgcca
    34021 gctccgtctg gagccgccgg gttccatatg tttcgcgag
//
LOCUS       DADMIB010000028        32956 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.028, whole genome shotgun sequence.
ACCESSION   DADMIB010000028 DADMIB010000000
VERSION     DADMIB010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32956
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.028"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..257
                     /locus_tag="JNZ89_001267"
     CDS             <1..257
                     /locus_tag="JNZ89_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HAY8935198.1"
                     /translation="LDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVV
                     MTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN"
     gene            267..1641
                     /gene="gspE"
                     /locus_tag="JNZ89_001268"
                     /pseudo
     CDS             267..1641
                     /gene="gspE"
                     /locus_tag="JNZ89_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414649.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
     gene            1631..2833
                     /gene="hofC"
                     /locus_tag="JNZ89_001269"
     CDS             1631..2833
                     /gene="hofC"
                     /locus_tag="JNZ89_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein transport protein HofC"
                     /protein_id="HAY8935199.1"
                     /translation="MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLS
                     LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPSKQWQALLQSLAH
                     DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK
                     SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW
                     LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA
                     GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTG
                     EASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL
                     GDAMSGMG"
     gene            complement(2868..3911)
                     /gene="guaC"
                     /locus_tag="JNZ89_001270"
     CDS             complement(2868..3911)
                     /gene="guaC"
                     /locus_tag="JNZ89_001270"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HAY8935200.1"
                     /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSDQSW
                     SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS
                     TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
                     TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
                     DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK
                     RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI
                     RVQEQENRIFNNL"
     gene            4136..4756
                     /gene="coaE"
                     /locus_tag="JNZ89_001271"
     CDS             4136..4756
                     /gene="coaE"
                     /locus_tag="JNZ89_001271"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HAY8935201.1"
                     /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA
                     PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ
                     ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA
                     TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP"
     gene            4756..5499
                     /gene="zapD"
                     /locus_tag="JNZ89_001272"
     CDS             4756..5499
                     /gene="zapD"
                     /locus_tag="JNZ89_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HAY8935202.1"
                     /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF
                     RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL
                     ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS
                     LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH
                     KSRFAIRFMPLDSENGQVPERLDFELACC"
     gene            5509..5706
                     /gene="yacG"
                     /locus_tag="JNZ89_001273"
     CDS             5509..5706
                     /gene="yacG"
                     /locus_tag="JNZ89_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HAY8935203.1"
                     /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE
                     KRIPSSGDLSESDDWSEEPKQ"
     gene            complement(5813..6202)
                     /gene="mutT"
                     /locus_tag="JNZ89_001274"
     CDS             complement(5813..6202)
                     /gene="mutT"
                     /locus_tag="JNZ89_001274"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HAY8935204.1"
                     /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE
                     TPEQAVVRELQEEVGITPQHFSLFEKLAYEFPDRHITLWFWLVESWEGVPWGKEGQPG
                     EWMSLVGLNADDFPPANEPVIAKLKRL"
     gene            complement(6262..8967)
                     /gene="secA"
                     /locus_tag="JNZ89_001275"
     CDS             complement(6262..8967)
                     /gene="secA"
                     /locus_tag="JNZ89_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HAY8935205.1"
                     /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK
                     GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM
                     RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
                     MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
                     ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE
                     RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
                     IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG
                     TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
                     PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG
                     RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
                     KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED
                     VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL
                     AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
                     PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ
                     LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ"
     gene            complement(9029..9541)
                     /gene="secM"
                     /locus_tag="JNZ89_001276"
     CDS             complement(9029..9541)
                     /gene="secM"
                     /locus_tag="JNZ89_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414639.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secA regulator SecM"
                     /protein_id="HAY8935206.1"
                     /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNVPA
                     KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQYAIRTVIRHLSFAMAPQTL
                     PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ
                     GIRAGPQRLT"
     gene            complement(9772..10689)
                     /gene="lpxC"
                     /locus_tag="JNZ89_001277"
     CDS             complement(9772..10689)
                     /gene="lpxC"
                     /locus_tag="JNZ89_001277"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000595491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HAY8935207.1"
                     /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
                     NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
                     IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID
                     FNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
                     DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFIAYKSGHALNNKLLQAVL
                     AKQEAWEYVTFQDDAELPLAFKAPSAVLA"
     gene            complement(10790..11941)
                     /gene="ftsZ"
                     /locus_tag="JNZ89_001278"
     CDS             complement(10790..11941)
                     /gene="ftsZ"
                     /locus_tag="JNZ89_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HAY8935208.1"
                     /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
                     DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA
                     GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
                     ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
                     EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
                     TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
                     VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD"
     gene            complement(12002..13264)
                     /gene="ftsA"
                     /locus_tag="JNZ89_001279"
     CDS             complement(12002..13264)
                     /gene="ftsA"
                     /locus_tag="JNZ89_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017374018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HAY8935209.1"
                     /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
                     GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
                     EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
                     ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI
                     AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
                     VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL
                     TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
                     GEAEVEKRVTASVGSWIKRLNSWLRKEF"
     gene            complement(13261..14091)
                     /gene="ftsQ"
                     /locus_tag="JNZ89_001280"
     CDS             complement(13261..14091)
                     /gene="ftsQ"
                     /locus_tag="JNZ89_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HAY8935210.1"
                     /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV
                     VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR
                     LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML
                     YGPEGSANEVLQGYREMGQMLAKDRFTLKETAMTARRSWQLTLNNDIKLNFGRGDTMK
                     RLARFVELYPVLQQLAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ
                     "
     gene            complement(14093..15013)
                     /locus_tag="JNZ89_001281"
     CDS             complement(14093..15013)
                     /locus_tag="JNZ89_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HAY8935211.1"
                     /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE
                     VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL
                     LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE
                     NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS
                     DETQYFCPAGLDASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG
                     MTSHSLVPMAARQAGMSFSQLVVRILELAD"
     gene            complement(15006..16481)
                     /gene="murC"
                     /locus_tag="JNZ89_001282"
     CDS             complement(15006..16481)
                     /gene="murC"
                     /locus_tag="JNZ89_001282"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HAY8935212.1"
                     /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
                     QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
                     IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
                     VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL
                     HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR
                     QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFLGTGRRFDFLGEF
                     PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD
                     DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML
                     APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD"
     gene            complement(16535..17602)
                     /gene="murG"
                     /locus_tag="JNZ89_001283"
     CDS             complement(16535..17602)
                     /gene="murG"
                     /locus_tag="JNZ89_001283"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HAY8935213.1"
                     /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR
                     MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM
                     GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN
                     PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS
                     GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
                     LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR
                     AASIPDATERVANEVSRAARA"
     gene            complement(17599..18843)
                     /gene="ftsW"
                     /locus_tag="JNZ89_001284"
     CDS             complement(17599..18843)
                     /gene="ftsW"
                     /locus_tag="JNZ89_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HAY8935214.1"
                     /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY
                     DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL
                     PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI
                     ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVVFVTTLAMLFLAGAK
                     LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL
                     WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL
                     EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
                     MLLRIDYETRLEKAQAFVRGSR"
     gene            complement(18843..20159)
                     /gene="murD"
                     /locus_tag="JNZ89_001285"
     CDS             complement(18843..20159)
                     /gene="murD"
                     /locus_tag="JNZ89_001285"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HAY8935215.1"
                     /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL
                     DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE
                     AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELS
                     SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT
                     MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
                     LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL
                     QVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME
                     QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG"
     gene            complement(20162..21244)
                     /gene="mraY"
                     /locus_tag="JNZ89_001286"
     CDS             complement(20162..21244)
                     /gene="mraY"
                     /locus_tag="JNZ89_001286"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HAY8935216.1"
                     /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
                     IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
                     VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL
                     VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA
                     TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
                     LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
                     EPRVIVRFWIISLMLVLIGLATLKVR"
     gene            complement(21238..22596)
                     /gene="murF"
                     /locus_tag="JNZ89_001287"
     CDS             complement(21238..22596)
                     /gene="murF"
                     /locus_tag="JNZ89_001287"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HAY8935217.1"
                     /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK
                     GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV
                     VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG
                     ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN
                     ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP
                     LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN
                     ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK
                     QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEVVRALQENG
                     TC"
     gene            complement(22593..24080)
                     /gene="murE"
                     /locus_tag="JNZ89_001288"
     CDS             complement(22593..24080)
                     /gene="murE"
                     /locus_tag="JNZ89_001288"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HAY8935218.1"
                     /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH
                     QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY
                     HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
                     SAVDVQHELAGLVEQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
                     EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKV
                     IDVNYHDSGVTIRFSSSWGDGEIESHLIGAFNVSNLLLALATLLALGYPLADLLKTAA
                     RLQPVCGRMEVFTVPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
                     GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC
                     AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA"
     gene            complement(24067..25833)
                     /locus_tag="JNZ89_001289"
     CDS             complement(24067..25833)
                     /locus_tag="JNZ89_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HAY8935219.1"
                     /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW
                     LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
                     GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH
                     LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
                     EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
                     NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY
                     RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG
                     LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
                     PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
                     NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
                     ALTTGDKNEFVINQGEGTGGRS"
     gene            complement(25849..26214)
                     /gene="ftsL"
                     /locus_tag="JNZ89_001290"
     CDS             complement(25849..26214)
                     /gene="ftsL"
                     /locus_tag="JNZ89_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HAY8935220.1"
                     /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI
                     CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
                     EKLQMQHVDPSQENIVVQK"
     gene            complement(26211..27152)
                     /gene="rsmH"
                     /locus_tag="JNZ89_001291"
     CDS             complement(26211..27152)
                     /gene="rsmH"
                     /locus_tag="JNZ89_001291"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HAY8935221.1"
                     /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
                     LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL
                     GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF
                     AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
                     IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL
                     GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA"
     gene            complement(27154..27612)
                     /gene="mraZ"
                     /locus_tag="JNZ89_001292"
     CDS             complement(27154..27612)
                     /gene="mraZ"
                     /locus_tag="JNZ89_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HAY8935222.1"
                     /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC
                     LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
                     GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL"
     gene            complement(28214..29218)
                     /gene="cra"
                     /locus_tag="JNZ89_001293"
     CDS             complement(28214..29218)
                     /gene="cra"
                     /locus_tag="JNZ89_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite repressor/activator"
                     /protein_id="HAY8935223.1"
                     /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
                     HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
                     PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANAPFPIVALDRALDREHFTSVV
                     GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN
                     SYEREAAAQLFEKWLETHLMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN
                     ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
                     "
     gene            complement(29300..29386)
                     /locus_tag="JNZ89_001294"
     CDS             complement(29300..29386)
                     /locus_tag="JNZ89_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fruR/shl operon leader peptide"
                     /protein_id="HAY8935224.1"
                     /translation="MCNLQPNMSRWAFFAKSVGTWNKSSCRS"
     gene            complement(29398..29889)
                     /gene="ilvN"
                     /locus_tag="JNZ89_001295"
     CDS             complement(29398..29889)
                     /gene="ilvN"
                     /locus_tag="JNZ89_001295"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HAY8935225.1"
                     /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
                     RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK
                     RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIREVAKIVEVARSGVVGLSRGDK
                     IMR"
     gene            complement(29892..31616)
                     /gene="ilvI"
                     /locus_tag="JNZ89_001296"
     CDS             complement(29892..31616)
                     /gene="ilvI"
                     /locus_tag="JNZ89_001296"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025294.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HAY8935226.1"
                     /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID
                     HVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQ
                     VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD
                     LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVVAKKPVVYVGGGAI
                     MAGCHQQLKETVEALNLPVVSSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVI
                     FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPISISKTVTADIPIVGDARQVLEQMLEL
                     LSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVT
                     SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGS
                     IQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA
                     EAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM
                     WLSKTERT"
     gene            complement(31934..32878)
                     /gene="leuO"
                     /locus_tag="JNZ89_001297"
     CDS             complement(31934..32878)
                     /gene="leuO"
                     /locus_tag="JNZ89_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LeuO"
                     /protein_id="HAY8935227.1"
                     /translation="MPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH
                     VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG
                     SGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ
                     ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDR
                     FASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVL
                     PLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR"
BASE COUNT         7912 a         9256 c         8017 g         7771 t
ORIGIN      
        1 gattagatac ctgcgacggt ggcagcaatg gcattccctc gcctaccacc acccgctatg
       61 tttcagccat gagtgtggca aaaggcgtgg tgtcgctgac cgggcaagaa agtctcaatg
      121 gactaagcgt cgtcatgacg ccaggttggg ataacgcaaa cggcgtcacc ggctgggcgc
      181 gcaactgcaa tattcaaagt gacagcgcat tgcagcaagc ctgcgaagat gtcttccgct
      241 ttgatgacgc caactaagga gcggcaatga atattccaca gctcaccgcc ctgtgtctgc
      301 gttatcaggg agtcttgctg gatgccagcg aagaggtggt tcatgttgcg gtagtcgatg
      361 caccttcgca tgagttgctg gacgcattgc atttcgctac caccaaacgt attgagatca
      421 cctgctggac gcgccaacaa atggaaggcc acgccagtcg cacacaacag acattgcccg
      481 tagctgttca ggagaagcat cagtcgaaag cagagttgct gactcgaacg ttacaatctg
      541 cgctggaaca acgtgcgtct gatattcata tcgaaccagc ggacaatgcc taccgcatcc
      601 gcttgcgtat cgacggcgta ttgcatcctt taccggatgt ttcaccggat gccggagtcg
      661 cattaaccgc cagattaaaa gtgctgggaa acctggatat tgcggaacat cgcctgccgc
      721 aggacgggca attcactgtc gaactggcag gaaacgccgt ctcatttcgt attgcgacct
      781 taccatgtcg gggtggtgaa aaggtggtat taaggttgtt acagcaggtg aaccaggcac
      841 tggatgttaa cacgctggga atgcagccgt tacaactggc ggactttgct catgccttgc
      901 aacaaccaca gggactggtg ctggtaactg gccctacagg cagcggcaaa acggtcacgc
      961 tttatagtgc cctgcaaaag ctgaataccg ctgacattaa tatttgtagc gtcgaagatc
     1021 cggttgagat ccccatagcc ggactaaacc agacgcaaat ccatccgcgt gccgggctca
     1081 cctttcaggg cgttttgcgt gcgttattgc gccaggatcc tgacgtcatc atgatccgat
     1141 ggcgaaacgg cagaaattgc cattaaagcc gcgcaaaccg gtcacctggt gttgtctacc
     1201 ctacacacta attccacctg cgaaacgctg gtacgtttac agcaaatggg agtcgcccgc
     1261 tggatgctct catcagcgct tacgctggta atagcccagc gtctggtacg taaattttgc
     1321 ccacattgtc gccagcagca aggggagccc atccatattc cagacaatgt atggccgtcg
     1381 ccgctgcccc actggcaggc acccggttgt gtacattgct accacggttt ttatggtcgt
     1441 accgccttgt ttgaagtcct gcccattaca ccagccatac gccagcttat ttccgctaat
     1501 accgacgttg aatcgctgga aacgcacgca cgacaggcgg gtatgcgtac gctttttgaa
     1561 aacggctgcc tagccgtgga gcaaggctta accacctttg aagagttaat ccgcgtactg
     1621 gggatgccgc atggcgagta agcaactctg gcgctggcat ggcataaccg gcgacggcaa
     1681 tgcgcaagat gggatgctat gggcagagag ccgtgctttg ctgctcatgg cactacagca
     1741 acagatggtt accccactta gcctgaagcg aatcgccatc aattctgcgc agtggcgagg
     1801 agataaaagc gcggaagtca ttcatcaact ggcgacgcta ctcaaagccg ggttaacgct
     1861 ttctgaaggg ctggcactgc tggcggaaca gcatcccagt aagcaatggc aagcgttgct
     1921 gcaatcgctg gcgcacgatc tcgaacaggg cattgctttt tccaatgcct tattaccctg
     1981 gtcagaggta tttccgccac tctatcaggc gatgatccgc acgggtgaac tgaccggtaa
     2041 gctggatgaa tgctgctttg aactggcgcg tcagcaaaaa gcccagcgtc agttgaccga
     2101 caaagtgaaa tcagcgttac gttatcccat catcatttta gcgatggcaa tcatggtggt
     2161 tgtggcaatg ctgcattttg ttctgccgga gtttgccgct atctataaga ccttcaacac
     2221 cccactaccg gcactaacgc aggggatcat gacgctggca gactttagtg gcgaatggag
     2281 ctggctgctg gtgttgttcg gctttctgct ggcgatagcc aataagttgc tgatgcgccg
     2341 accgacctgg cttatagtgc ggcagaaatt gctgttacgc atcccgatta tgggttcact
     2401 gatgcgggga caaaaactca cgcagatctt tacgattctg gcgctgacac aaagtgcagg
     2461 cattactttt ttgcagggcg tagagagcgt cagagaaaca atgcgctgcc cgtactgggt
     2521 gcaacttctg acacaaatcc agcacgatat cagtaacggt catcccatct ggctggcgct
     2581 aaaaaatacc ggggagttta gcccgctctg tttgcaatta gtgagaacag gagaggcatc
     2641 cggctcgctg gacctcatgt tagacaacct cgcccatcat catcgggata acacaatggc
     2701 gctggcggat aacctcgcag ccttactgga accggcgttg ctgatcataa cgggaggaat
     2761 tatcggtacg ctggtggtgg cgatgtatct gccaattttc catttaggcg atgcgatgag
     2821 tgggatggga taacgctggc gtgttgctcc acaccagcgt tggaagatta caggttgttg
     2881 aagatgcggt tttcttgttc ctgcacacgg ataaatgtgg tgcgcttggt cagttctttc
     2941 aggcgtgaag ccccaacgta tgtacaagct gaacgcaggc cgcccaaaat atcacgcgcg
     3001 gtattttcaa ccgggcctcg cagcggcagc ttaacggttt taccttctgc tgcgcgatat
     3061 tccgcaacgc cgccaacgtg acgtttcatc gcagactcgg agctcatgcc gtagaacagc
     3121 ataaatttct cgccgttctc ctcaacgatg cgaccgccgc tctcttcgtg gcccgccagc
     3181 atgccgccaa gcatgacgaa atcggcaccg ccgccaaagg cttttgcgac atcgcccggc
     3241 gtggtgcagc caccgtcgct gacgatcatt ccgcccagac cgtgcgccgc atcggcacat
     3301 tcgattaccg cagaaagctg cggataaccg acgcctgttt tgacgcgagt tgtacaaaca
     3361 gaacctgggc caatgccaac tttaacgata tcagcaccgg agaggataag ctcctcacac
     3421 atttcaccag tcactacgtt gccagcacaa atggttttgg tcggccacgc ttcacgcgct
     3481 ttcgcaacga actgcacgaa gtgttcggaa taaccattcg ccacatcaat acaaacaaag
     3541 tttaatgccg ggttcaggtc gagaatctgt ttagtttttt cgaaatccgc atcagacgta
     3601 ccggtagaaa ccatcacatg tttcagcaca tcagcggaag aattgttgat aaacgcttgc
     3661 cactcttcga cagaatagtg tttatgcaca gcagtcaaaa tatcaaaaga agccagcgca
     3721 gaggccatag aaaatgtacc tacggtgtcc atatttgcgg cgataatcgg cacgccggac
     3781 cagctctgat ctgaatgttt gaaggtgaat tgacgttcca gttcaacatc ggaacggctt
     3841 ttaagagtgg agcgtttagg gcggatgaga acgtctttaa aacctaactt cagatcttct
     3901 tcaatacgca tgtgcggatt cctggggtta atggctataa gggtaagagc gcaactccag
     3961 tgacgctatc atacgcacta atcaatgcgg cgcaagactg cgaaattgtc tttttttacg
     4021 ctacaatccc ataaatttac ctggtaaata gtgagcgaac gtttcatcaa tttcgctttc
     4081 gtgcactcat ttttaacgtt ttgataatca tgatgaattc ccgggaatat aaattatgag
     4141 gtatatagtt gccttaacgg gaggcattgg cagtggcaag agtaccgttg ccaatgcgtt
     4201 tgctgatctc ggaattaacg tcattgatgc cgatattatt gcgcgtcagg tggttgaacc
     4261 aggtgcacct gcgctacatg ccattgctga tcactttggc gctaacatga ttgctgctga
     4321 tggaacattg cagcgccggg ccttgcgcga gcggatcttc gccaacccgg aagagaaaaa
     4381 ctggcttaac gccctgctgc atccgctgat tcagcaagag acgcaacacc agatccagca
     4441 agctacttcc ccctatgtac tgtgggttgt gccattgctg gtagaaaact cactgtataa
     4501 aaaagcgaat cgagtgctgg tggtggatgt cagcccagaa acgcaactta agcgcaccat
     4561 gcagcgcgat gatgtaactc gcgagcatgt cgaacaaatc cttgctgctc aggcaacgcg
     4621 cgaagcccgc cttgccgtgg cagatgacgt cattgataat aacggcgcac cggatgctat
     4681 cgcatcggat gttgcccgcc tgcacgcaca ctatttgcag cttgcgtcgc agtttgtctc
     4741 acaggaaaaa ccgtaatgca gacccaggtc ctttttgaac atccactaaa tgaaaaaatg
     4801 cgtacatggc tgcgcattga gtttttgatt cagcaactca ccgttaattt acccatcgtt
     4861 gaccacgctg gcgcgctgca tttcttccgt aatgtcagtg aattactgga tgttttcgag
     4921 cgcggcgaag tccgcactga gctgttgaaa gaacttgacc ggcagcaacg taaactccag
     4981 acctggattg gcgtgcctgg cgtggaccag agccgtattg aagcattaat tcagcagtta
     5041 aaagcggcgg ggagcgtatt aatttccgcg ccgcgtatcg ggcaatttct gcgtgaagat
     5101 cgtttgattg ctctggtgcg tcagcgactg agcatcccag gcggctgttg cagctttgat
     5161 ttacctacat tgcacatttg gctgcatcta ccccaggcgc agcgcgacag ccaggtagaa
     5221 acctggattg ccagcctgaa cccgctcacc caggcactta ccatggtgct ggatttaatt
     5281 cgccagtcgg cccccttccg taaacaaacc agcctgaatg gtttttatca ggataacggt
     5341 ggcgatgccg acttgctgcg cctgaatctg tcgctcgatt cacagcttta tccgcaaatt
     5401 tccggacata agagccgttt tgccattcgt tttatgccgc tggacagtga aaacggacag
     5461 gtaccggaac gtctagattt cgaactggcc tgttgctaag gagtgaaaat gtcagaaact
     5521 attacggtga attgcccaac ctgcgggaaa acggtggtat ggggtgaaat cagcccgttt
     5581 cggccatttt gctccaaacg ttgtcagctg atcgacctcg gagaatgggc tgctgaagaa
     5641 aaacgaatcc ccagcagtgg cgatctttcc gaaagcgatg actggagcga agagccaaag
     5701 cagtgacatt ggtctgatgc cgcacatagg cctgataaga cgcggacagc gtcgcatcag
     5761 gcatcttgtg caaatgtcgg atgcggcgtg aacgccttat ccgacctaca gactacagac
     5821 gcttaagctt cgcaattacc ggttcattgg ctggcggaaa atcatcggca ttaagaccga
     5881 ccagcgacat ccactcaccg ggttgccctt ctttacccca cggcacccct tcccaacttt
     5941 cgaccagcca gaaccacaga gttatatgcc tgtccgggaa ttcatatgcc agtttttcaa
     6001 atagcgaaaa atgttgtggg gtaatcccga cctcttcctg aagttcacgc accaccgcct
     6061 gttccggcgt ttcgcccatt tcaattttac cgccgggaaa ctccagttta ttcgccatgt
     6121 gcgcatctgc tgcgcgacgc gttataaaga tttcattgtt ctcgttgcga ataataccta
     6181 ccgcaatttg cagctttttc attgttttaa acctataaaa aaggcgcaga atcctgcgcc
     6241 ttttgcttca acagttagct tttattgcag gcggccatga cactgcttgt attttttacc
     6301 agaaccgcac gggcaaggat cgttacgtcc tactttgcgc tcaccggttt gcgccgccag
     6361 tgcagctgcg gctgcagagt cgtcatcctg atggctaagc tgctgcattt gcgctaaacg
     6421 ctcggcttcc atacgacgct gttgttccag ctcctcaacc tcttcaggca tacgtacctg
     6481 aactttgctc agcgtactga taacttcata tttcaacgac tccagcatcg ctgcaaacat
     6541 ggagaacgat tcacgtttgt attcctgctt cggatctttc tgtgcatagc cacgcaggtg
     6601 gataccctga cgcagatagt ccatcgctgc caggtgctct ttccacaggg agtcaagcgt
     6661 ttgcagcatg acgcctttct cgaagtgacg catcatctca gcaccaacca cttcttcttt
     6721 acgctgatac acttcgatgg actgcgccag aatgcgctca cgcagcgtct cttcatgcag
     6781 ttctggttct ttatccagcc actcggcaat tggtaaatcg aggtcgaaat cgttcttcag
     6841 acgttcctgc agccccggaa tatcccacat ttcttccagc gactgtggcg gaatgtaggc
     6901 atcaatggtg gctttgaaca catcttcacg aatgctgttg atggtttcgc tcacatcgct
     6961 gacatccagc agttcgttac gctgggagta aatggcgcga cgctgatcgt tagccacgtc
     7021 atcatattcc agcagttgct tacgaatgtc gaagttacga ctttcaactt tacgctgggc
     7081 gttggcaatc gctttagtca cccacgggtg ttcaatggct tcgcctggct tcatacccag
     7141 tttacgcatc atgccggata ctcggtcgga agcaaaaata cgcatcagcg catcttccat
     7201 cgacaggtag aaacgggaag aaccagcatc cccctgacga ccagaacgac cgcgcaactg
     7261 gttatcgata cgacgggatt cgtgacgctc ggtaccgatg atatgcaggc cacctgcttc
     7321 cagtaccgca tcgtgacgta cctgccagtc ggctttaatt ttttcaattt gctctgcggt
     7381 cggattttcc agcgcggcaa cttctgcctg ccagctacca ccgagcacaa tatctgtacc
     7441 acgacccgcc atattggtcg cgatagtcac cgcagccgga taacctgctt gagcaacaat
     7501 cgccgcttcg ttggcgtgga atttggcgtt caggacgttg tgcttaatac cggctttggt
     7561 cagttcgttt gacaccagct ccgatttttc gatggagata gtacccacca gcaccggctg
     7621 gcctttcgca gtacgttctt tgatatcttc aatgatcgcc tgaatttttt ccgcttcagt
     7681 catgtagacc aggtccggca gatctttacg aatcattgga cggttggtcg gaacaacgac
     7741 ggtatccagc ttgtagatgg agctaaattc gaaagcttcg gtatcagcag taccggtcat
     7801 ccccgccagt ttttcataca gacggaagta gttctggaag gtgatcgaag ccagcgtttg
     7861 gttttcgttc tggatctgca caccttcttt cgcttccaca gcctggtgca gaccatcgga
     7921 ccagcgacgg ccctgcatgg tacgaccggt gtgttcgtca acgatgataa cttcaccatc
     7981 tttaacgatg tagtcgacgt cgcgggtaaa cagcgcatga gcgcgcagcg ccgccgttac
     8041 gtggtgcatc agcatgatgt tggccggaga gtacagagac tccccttcat ccatgatgcc
     8101 ctctttcacc agcagttctt caatcagcac cagaccacgt tcggtcaggt tcacctggcg
     8161 agatttttcg tccaccgaga agtggccttc gccctggaag gtttcggagt cttctttttc
     8221 ctgacggatc aggtgcggaa taattttatt cacgcgttta tacatttccg agctgtcttc
     8281 tgccgggccg gaaatgatca gcggtgtacg cgcttcatcg atcaggatgg agtccacttc
     8341 gtccaccagc gcatagtgca gtttacgctg tacacgttct tcagggctga acgccatatt
     8401 gtcgcgcagg tagtcaaagc cgtattcgtt gttcgtaccg taagtgatgt cagctgcgta
     8461 agcttcgcgc tttgccggtg ctggcatgcc cggcaggttg ataccgacag tcaggccaag
     8521 gaattcaaac agcggacggt tgttttcggc gtcacgttgc gccaggtagt cgttgacggt
     8581 aactacgtgc acgcctttac cggttagtgc gttcaggtaa gcaggcagcg ttgcggtcag
     8641 ggttttacct tcaccggtac gcatttcggc gatgcagcgt tcgttaagaa ccataccgcc
     8701 gagtaactga acgtcgaagt gacgcatacc aaagacgcgc ttacttgcct cacgtaccac
     8761 ggcgaaagct tccgggatca gattttccag cacttcgcct ttttccagac gtgcacgaaa
     8821 ctctgcggtt ttccctttca gttcttcgtc ggagagtttt tccatctccg gttccatggc
     8881 attgatgatg ttgaccactt tgcgcatccg gcgcagggtg cgatcgttac gactaccgaa
     8941 aactttagtt aacaatttga ttagcataat aaaatctcaa acgccccgcg ttgcggagtt
     9001 aataaaatga agtaaaggtt tattgttgtt aggtgaggcg ttgagggcca gcacggatgc
     9061 cttgcgcctg gcttatccag acgggcgtgc tgaattttgc ttgtggggta aaatgcgcat
     9121 aatcaatgcg ataacccttt tcagacggcg tgccttcctg ggtcagcagc gcgctgagcg
     9181 tatccagtaa tgcaagatgt tgcgcctgaa gaggcaaaga ttcttcagca acgggcagtg
     9241 tttgcggtgc cattgcgaaa gaaagatgac ggattaccgt gcgaatggca tattgatgcc
     9301 agtaatcaac ggaatagttc gaattcgggc ggcgtgtgtt cgcttccagc aaggccaatt
     9361 gaccaaagtt aactttggct gaaggctcgt ggttgcgggt tgtcgctttt gcgggcacgt
     9421 ttggttcggc ggcgttgctg agcgcaggca aacctaaact cgccgcgacc atccctaata
     9481 agagatgcgg ccagaagtag cgtttaccaa actgtcgcca gcgcgtcagt attccactca
     9541 cgttattgcc atcccgatcg aattcaaacg tatttagcgc acaaatctta tcattaaagc
     9601 ctgaagtcca cagcatgaat gaagataagt tgtgcgtaaa agtgcttaaa aaaacagcgt
     9661 tcgcaccgtt ttttatagct cttataaaat tcaaaaaaaa acgactggtt cacctggccg
     9721 gagagagtgc cagatttgcc agtcgaattt tatacgacag tataaatgtc gttatgccag
     9781 tacagctgaa ggcgctttga aggccaacgg cagttctgcg tcgtcctgga aggtcacata
     9841 ttcccaagct tcctgtttcg ccaggacagc ctgcagcagt ttgttattca gtgcatgacc
     9901 ggatttataa gcgataaatg caccaataat attgtgacca cacatgaaca agtcaccgat
     9961 cgcatcgagc attttgtgac gcacaaattc gtcttcaaaa cgcaggccgt cttcgttcag
    10021 tacgcgataa tcgtcaacaa cgatggcaca atcgaagctg ccgcccaggc acaaaccacg
    10081 ggactgcaga tattcgatat cacgcatgaa accgaacgta cgcgcacggc tgatctggcg
    10141 cataaacgca tcagcggaga agttcatcgc atagcgctgg ttgctggaat caatagccgg
    10201 atggttaaaa tcgatggtga aatccagcga aaaaccattg tacggcttaa attcagccca
    10261 cttatcgcca tcttcgacac gaacagtctc tttgatgcga acaaattttt tggcgcagtt
    10321 caactcgtcg ataccggcgt caagcagcag gtatacaaac ggagcggcgc tgccgtccat
    10381 gatcgggatt tccggcgcgt taacttcgat aacaatgtta tcgatgccca ggcccgcgag
    10441 agcagcattg aggtgctcta cggttgaaat ccgtacatca tgctcgttga ccagacacgt
    10501 acagagcatg gtatcacgca cagatttggc atcggccggg aaatctaccg gtggattcaa
    10561 gtcggtgcga cgatagatga ccccggtgtt ggccggcgca gggcgtaacg tcagagtgac
    10621 tttcttgccg gtatgtaaac cgacacccgt cgcctgaacg atacgtttaa gtgtcctttg
    10681 tttgatcatc gtattatctc gccaaattac ctatccaacc gaagtgtact atacattcgg
    10741 cgggccagtt tagcacaaag agcctcgaaa ccaaaattcc agtcaattct taatcagctt
    10801 gcttacgcag gaatgctggg atatccagat aatccggctc tttcgcagtt tgcggcgcat
    10861 tgtcattcac gactttagca accggcttct gctcctgggt cagcggagcc atcccatgct
    10921 gctggtagcg atccatcact ggctgctgaa cctgcttatt ggtcaccaga gtgatttcag
    10981 gacgtttgtc catgccgata cctgtcgcaa caacggttac gcgcagctcg tcattcatat
    11041 ccgggtcaag agaagtaccg ataaccacag tcgcgttgtc ggaagcaaat gcacggatgg
    11101 tgttacctac cgtttcgaac tcatccagac gcaggtcgaa gcccgccgtg atgttaacca
    11161 gcacgccgcg cgcgccagac aggtcgatat cttccagcag cggagaagag atagccattt
    11221 cagcagcttc ttccgcacgg tcttcaccgc tcgccacgcc agaacccatc attgcgtagc
    11281 ccatctcaga cattacggtg cgtacgtctg caaagtccac gttcatcaaa cccggacgag
    11341 taatcagttc agcgatacct tgcacagcgc ctttcagtac atcgttcgct gcgccaaacg
    11401 catccagcag ggagataccg cggcccagaa ctttcagcag tttgtcgttc gggatagtga
    11461 tcagagagtc cacatgcttg gacagttcag tgatcccctg ctccgcgaat gccatacgct
    11521 tcttgccttc aaagttgaaa ggcttagtga cgacagcaac ggtcaggata cccaaatctt
    11581 ttgccacttc agcgacgact ggtgctgcac ctgtaccggt accaccaccc atacccgcag
    11641 caataaagac catgtctgca ccttccagcg ccgcacgcaa tgcatcgcga tcctcatcag
    11701 ccgcattgcg gccaacttct ggattagcgc cagcgcccag tcctttggtg ataccgctac
    11761 cgatttgaat cgtctgtcca accgctgttt tacgcagcgc ttgtgcatcg gtatttaccg
    11821 cgaagaattc aacaccttca atgcgctcgc gcaccatgtg ttcaacagca ttaccgccgc
    11881 cgccgccgac gccgatgact ttaatcaccg cgtcattggt aagttccatt ggttcaaaca
    11941 tagtttctct ccgatttgtg cctgtcgcct gaggccgtaa tcatcgtcgg cctcataaaa
    12001 attaaaactc ttttcgcagc caactattga gtcgcttgat ccacgagcca actgatgctg
    12061 taacacgttt ttctacttca gcttcaccgt taagatgtga ctctttccca tagtgaagca
    12121 atcccaccgc cgtcgaataa tacggctcct gagcataatc cgttaaaccg gtaatgttca
    12181 gcggcgcgcc gatacgcact tgcgtatgaa acacgcgctg agcacaggct gcaagacctt
    12241 cgatctgcgc tgcgccaccg gttaatacaa tgcctgccgc caggtgatgt ttaacccctt
    12301 gttggcgaag cttttcctgc aactgcaata tctcttcgtt gaccaggttg agcagctcgg
    12361 tatagcgcgg ctcgatcacc tctgccaggg tctgacgttg cagactccgt ggcggacgac
    12421 cgcctacgct cggcacttcc acgctctcat cttttccaac gatggaaccc agcgcacaac
    12481 cgtggcgaac tttaatcgct tcggcgtcgc ttggcggcgt gccaaaggcg taagcgatat
    12541 cactggtcac gacattgcca gcataaggaa ttaccttagt gtggcgcaat gccccaccgg
    12601 tataaacggc gatatccatt gtaccacctc cgatatcgac gacgcagaca cccagttcac
    12661 gttcatcttc cgtcaatacc gaataacttg atgccagtcc ggcaaatatc agttggtcaa
    12721 ctttcagccc acaacgttca accgctttga cgatgttttt cgccatatcg ttgtgacatg
    12781 tgatcaggtg cacttttgcc tgcatccgca cgcccgaaag tcctaccgga ttcttgatcc
    12841 cttcctgata gtcaatcgca tactcttgcg ggatcacatg cagcacacga tgttcatcgc
    12901 gcacacgcac cgatttcgcg gtatggacga cgttttccac atcttcttgc gtcacttctt
    12961 cttcagaaat aggcaccata ccaatttcat tctggcagct gatgtgctta ccagaaagcg
    13021 ccagatatac cgaagagatc tgacaatctg ccatcaattc tgcctggtca atggcgcgtt
    13081 gtacgcactt gaccacggat tcgaggtcgt tcaccccgcc tttatccata ccacgtgacg
    13141 ggcagctgcc cacgccaatg atattgacca taccgtcggg cagaacttcc cctactaaag
    13201 cggcaacctt cgcggtacca atctccagtc ctactaccag ttttctgtcc gtcgccttga
    13261 tcattgttgt tctgcctgtg cctgattttg ttgctgagta gattcctctg gcggcaaggg
    13321 cgcccagcct actgccgctc cagagtcata acgcaaatca acgtagctaa tccgtttgcc
    13381 atcggtttgc gccagctgct gtaaaaccgg ataaagttct acaaagcgag ccaaacgttt
    13441 catcgtatcg ccccggccaa aattgagctt aatatcgtta ttcagcgtca actgccagga
    13501 acgccgcgcg gtcatcgccg tttccttcag agtaaatctg tcctttgcca gcatctgccc
    13561 catttcgcga tagccctgca acacttcatt ggcgctgcct tccgggccat acagcattgg
    13621 aagcacctgc ttgctggtgc gatctggcgg cacgctgaag gtgtttcctt ccgcgtctac
    13681 catatgttga tcattccacc gcgcaatcgg cacatattca accagatgaa tcttcaattc
    13741 atcaggccac tgctttctga cgctcacctg cttaatccac ggcaggcgtt gttctatttg
    13801 cgtctggatg atgttgacat cctgggtcat aaaggtaccc ggctcaccca atgccaggat
    13861 cgactgccgg atatcgtcat tacgcgtgta atggcgttca ccggtcaaca ccagctttga
    13921 gagcggcagg cgttgcgcat cttccatcca gcccaacacg acccagccgc tcaccaacac
    13981 tgtcgttaaa acggtcagca ggaaaaggat ccccgccaga cgcgttccat tattgcggcg
    14041 agaagaaacc tcttcttcgc tgtttcgcgt gttcagagca gcctgcgaca tattagtccg
    14101 ccagttccag aattcgtact accaactgcg agaagctcat acctgcctga cgtgccgcca
    14161 tcggcaccag gctgtggctg gtcatacccg gtgaggtatt ggcttccagc agataaaact
    14221 gtccatcgct gtccagcata acgtcaatac gtccccatcc tttgcaacct aacgtcgtcc
    14281 atgctttcag cactaatgcc tgcaaattgg cctcttgtga cgcatccaga cctgcggggc
    14341 agaaatactg tgtctcatca gagagatact tcgcctcata atcatagaag gttccggacg
    14401 gttgaatacg tattgacggt aaaatttctt caccgagtat cgcaaccgtg aactccggcc
    14461 cacttagcca tttttcaatc aatacttctt catcgtgctg aaatgccaat cttaatgcat
    14521 cttgtagagc attttctgct actacttttg acattcccac actggaacct tcgcggctcg
    14581 gcttaacgat aaccggcaaa cccagagcag aaatttctgc taactgctta tcgctcaggc
    14641 ctttttcaaa ctctgcgcgg gttaacgcta cccacggcgc gaccggtaaa ccggcacctt
    14701 gccacagcag tttgctgcgt agtttatcca ttgaaagcgc agatgccatc actccgctgc
    14761 cggtataagg caagcccatc agctcgagca tgccctgcag cgtaccatct tcaccgccgc
    14821 gaccgtgtag cgcgataaac actttctgaa aacccatcga cttcagttgc gtcacgtcga
    14881 cttctttcgg gtcgacagga tacgcatcaa taccaccttc acgcagcccg gctaacaccg
    14941 ctgcgccaga attcagagaa acttcccgct cagcggaagt cccgcccaac aggaccgcga
    15001 ttttatcagt catgttgttc ttcctccgga gtttgcggct tcagtttgat ttcagctaaa
    15061 gaacgggcaa tttttccgat attaccagcc ccctgaacga gaatcaggtc gttaccggtt
    15121 aataccggtg ccagcatctc ggctacctgc gcagggtccg gcaccagaat gggatcaatt
    15181 ttcccacgtc cacgaattgt gcgacacagc gaacggctgt ccgctcccgg aattggcgct
    15241 tcgccagccg gatacacttc cagcatcaac agggtatcaa cctgcgtcag cacattggcg
    15301 aaatcatcat acaagtcgcg cgtacgggta aaacggtgcg gctgaaacag cattaccagg
    15361 tttttatccg gccagcctgc gcgcgccgct ttaatggtgg cgtcaacttc cgtcgggtgg
    15421 tggccgtagt catcgaccag cattgccgta ccgcttttac cattcactgg ctccagcggg
    15481 aattcaccga ggaaatcaaa acggcgacca gtccccagga agctctccag cgcacgcaaa
    15541 atagcctcgt cgtcaattcc ctcttccgta gcaaccgcaa ccgcagctgc ggcgttcagc
    15601 gcgttatgac ggcctggcgc attcagggtg acgcgcatcg gctctttgtc ctggcgcagc
    15661 agcgtaaagt gcccctgcgg gccaatctgc tgataatctt ctacacgcac gtcggcatct
    15721 tcgctgaagc cgtaagtcgt ggtctgacgt cccacacgcg gtaacaattc gcggatcacc
    15781 ggatcatcaa cacacatcac cgcacgaccg taaaacggca ggttgtgcag aaaattaata
    15841 aaagtctgtt ttaaattctc aaagtcgccc tggtaggtat ccatgtggtc ggcttcgata
    15901 ttggtgacaa tcgccaccat cggttgcaga tgcaggaacg atgcatcact ctcatctgct
    15961 tcggcaatca ggtaccgacc atgccccaaa cgcgcatgaa cccccgccgc ttttaccagc
    16021 ccgccgttaa cgaaggttgg gtcgagcccc gcttctgcgt agatgctgga aaccatcgcg
    16081 gtggttgtcg ttttgccgtg cgttcctgca atggcgatgc catgacgaaa acgcattaac
    16141 tcagccagca tttcggcacg acggatcacc ggaatacgcg cttcatgagc tgcgacaatt
    16201 tccgggttat cggcagaaat ggcgctggaa acaacgacca cgctggcatc acgtacgttt
    16261 tccgggcgat ggttgaaata aatcgtcgct cccagattca ttaactgctg cgtgaccgga
    16321 tttggcgcta aatcggaacc actgatctga taaccttcat tggccagaac ttcggcaata
    16381 ccgcccatac cggcaccacc gatgccgaca aaatgtatgt gccgaacgcg acgcatttcg
    16441 ggcacgatgg aacgcagttt tgccaattgt tgtgtattca ttctttacgc cattaacttc
    16501 ttaaattcat acgatgcaaa aggcatcgct acaattacgc ccgggcagcc cggctcactt
    16561 catttgccac tcgctcggtg gcatccggaa tggatgcagc gcgggcgcgt tctgccatgg
    16621 ttaataaggt ttctcgcgac cacccggcca gggtgttggc gacagcatcc acgctaagct
    16681 gtggctgctc gataattttg gctgcgcccg ctttttccag cggtagcgca ttccagtatt
    16741 gctggcggtc tttatgttga aacggcacaa acaacgccgg tagtcctgcc gcggcgattt
    16801 cactcaccgt taaagcaccg gagcggcaaa cgacgacatc cgcccacgca tacgccgccg
    16861 ccatatcatc aataaattcc gtcactttat gctgcggttg ccccgcttcg gcatacgcct
    16921 gttcaacgga ttgttgcgaa cctttaccgc tctgatgcca gatagtgact gaatcaccca
    16981 gtttcgcagc aacctgcggc attgtctggt taagaatgcg tgcgccctgg gaaccaccca
    17041 ctaccagcac acgaaccgga ccttcacgtc cagccaaacg ttgctgcggc aacggcagcg
    17101 ccagcacatc ggtacgcacc gggttaccca ccacttccgc attagggaaa gcgcctggaa
    17161 acgcctgcat cactttggtg gcaatcttcg ccagccattt attggttaag cccgcaatac
    17221 cgttttgttc atgaagtaca accggaatgc ctaacgacca cgcggccaga ccacctggac
    17281 ctgatacata gccgcccata ccgagtacca cgtcaggttt gtacgctttc ataatcgccc
    17341 gcgcctgacg ccaggcgttg aagatacgca gcggcgcagc tatcagtgct tttatacctt
    17401 ttccacgcag accagagata cgaatgaaat caatttcgat gccatgtttt ggcactaagt
    17461 ccgcttccat acggtcggca gtccccagcc agcgaacttg ccaaccctga gccattagat
    17521 ggtgcgcaac cgccagtccc gggaatacat gtccaccggt tccgcctgcc atcaccatta
    17581 atcgctttcc ttgaccactc atcgtgaacc tcgtacaaac gcctgcgctt tctccagacg
    17641 cgtttcataa tcaatacgca acagcatcat gatggctgtc gacataatca gtaagctcga
    17701 accaccgtaa ctgatcagcg gcaatgtcag acctttggtc ggtaacatcc ccgccgccgc
    17761 gcctacgtta accagcgcct ggaagctaaa ccagatgcca atagaacagg cgagaaaacc
    17821 ggaaaaacgg tggtcaattt ctaacgcttt gcggccaatc gacatcgcgc gaaaagcgac
    17881 gaagaatacc attaaaagtg ccagcaccac accgacatac cccagttctt cgccgataat
    17941 ggcgaaaata aagtcagtgt gcgcttccgg cagatactcc agtttttgta ccgagttacc
    18001 taaaccttgt ccccaaagtt cgccgcgacc aaacgccatc agcgattgcg ttaactgata
    18061 gccgctgcca aagggatctt cccacgggtt ccagaatgcg gtaacacggc ggatacggta
    18121 cggttcggcg agtatcagca acacaaccgc tgaaatgccc ataccgataa tggcaatgaa
    18181 ctgccacaat ttcgctcccg ccaggaacaa catcgccagc gtagtcacaa acaccaccac
    18241 caccgtacca aggtctggct gtgccagcag taacactgcc aacaccagaa tcacgcccat
    18301 cggtttcagg aagccgcgca ggttattacg tacttcgtcg cctttacgca ccagatagtt
    18361 ggcgatataa caaaacagcg acagttttgt cagctccgca ggctggatac gcagcaaacc
    18421 gagatcgatc caacgcgatg cccctttaac cgagctcccc actaccagca cgatcatcag
    18481 caggatgata gatccgagca gcatcgtggc actgtagcgt tgccagaact ccatcggcag
    18541 acgcagcgta atgatcgcca gaatgaatgc caggatcaga tagacgccat cacgcttcgc
    18601 gaagaagaac ggatcgttgg ttaagcgttg ccctatgggc attgacgccg aggtcaccat
    18661 gataaagcca atcgccgcaa ggccgaaggt cagccacagt aaggtgcgat cgtacatgat
    18721 caggctgtcg gtatcttttt cccgcgagcc catcacccag ccttttagcg ccgtggagat
    18781 ccagaccagg atactgaatc ctggcaggcg cggcattttc aggcgaggga gagataaacg
    18841 catcaaccta actccttcgc cagacgggca aactcattgc ctcgttgttc aaagttcttg
    18901 aactgatcaa ggctggcaca ggccggggag agcagaacca tatcgcccgg ctgaacacgc
    18961 ggagccagca agcgcatcgc ctgttccata gtttcggttt gttctgccac ttccgggcgt
    19021 agcgccgcca gctgcgcacc gtcacgacca aaacagtaca aacgcacgtt gtcgccattc
    19081 agatagcgcg ccagtggact gaagtccgcc gatttaccat cgccgcccag caacaaatgc
    19141 agcgtgccgt ctacctgcaa gccattcaac gccgcttccg tactgccgac gttagtggct
    19201 ttcgaatcgt taatccagcg tacgccattg tgctccagca ccacttcaaa gcgatgcggc
    19261 agaccggtga aggtggttaa cgctttcagg ctgctggcgc gcggcaaacc agctgcgtct
    19321 gccagtgcca gtgctgccag cgcattggtg tagttatgct gcccggaaag tttcatctct
    19381 ttcacgttca gcactttctc gcctttcact cgcagccagg tttctccctg ctgatgattc
    19441 aggtgatagt cacccatgtt gacgccaaag ctgacgcagc gttcatcagc accgcgaatc
    19501 ggcattgtta aggcatcatc agcattgacg acacaaactt tcgcattttc gtaaatacgc
    19561 aattttgccg cacggtattg ctgcaaacca aacggatagc ggtccatatg atcttcagtc
    19621 acgttcagaa tggtcgccgc caccgcctgt aagctggaag tggtttccag ctggaagctc
    19681 gacagttcca gcacgtacag ttcgcactca gcatcaagca gcatcaacgc tggcaggcca
    19741 atattgccac ccacaccaac gttaaccccc gccgctttcg ccatttcacc cactagcgtg
    19801 gtgaccgtgc ttttgccgtt agaaccggta atcgccacaa tcggtgcttg tgcttcgcgg
    19861 cagaacagct cgatatcgcc aacgatttcg attccggcat cagcggcagc gcttaaggat
    19921 ggatgcgcca gtgcaatacc gggactggcg acaatcagat ctgccgccat cagccattca
    19981 tcattcagac tgcccgtgtg gcgttctacg gcttcgggta atttatccag gccaggcggt
    20041 gtcatacgcg tatccataac gcgcggcgtc acaccgcgag cgaggaaaaa gtccacgcag
    20101 gaaagcccgg tgaggcccag gccgataatg acgacatttt taccctgata atcagccatg
    20161 attaacgtac cttcagcgtt gccagaccaa tcagaaccag catcagcgaa ataatccaga
    20221 aacgcacaat gacgcgcggt tccggccagc ctttcagttc atagtggtga tgaatcggtg
    20281 ccatgcggaa aatacgttgt ccgcgcagtt taaaggagcc gacctgcagg atgacagaaa
    20341 gcgtttctac cacgaacacg ccccccataa tcaccagcag gaattcctga cgtagcagta
    20401 cggcgataat gcctaacgca ccacctaacg ccagcgaacc tacatcgccc ataaagacct
    20461 gcgccggata ggtgttaaac cacaggaagc ccagtcctgc cccgactatc gcggtacaga
    20521 caataaccag ttccccggcg tgtcgcagat acggtatgtg taaatagctg gcaaagttca
    20581 tgttgccggt cgcccacgcc accagcgcaa aaccaccggc gacaaatacg gtcggcataa
    20641 ttgccaggcc gtcgagacca tcggtcaggt ttaccgcgtt gccagtaccc acaatgacga
    20701 agtaagccag cagaatgtag aacagcccca actgcggcat cacatcttta aagaatggga
    20761 ccaccagctg cgttgcgggc gtgtctttgc cggcaaggta cagggcgaag gcgacaccca
    20821 gcgcaatgac cgacatccag aaatacttcc aacgagcgat caaccctttg gtgtctttac
    20881 gcaccacttt gcgataatca tcaacaaagc caataacacc gtaacctacc agcaccacca
    20941 acacgcacca gacgtacgga ttggacgggt aagcccacag cagtacggag atcacaatcg
    21001 ccgtcaggat cataatcccg cccatggtcg gcgtaccgcg cttgctgaag tgtgattcag
    21061 gaccgtcgtt acgcaccacc tgaccaaagg aaagtttttg caaatgagca atcatacgcg
    21121 ggcccatcca caatgagatg aacagcgcgg tcagcaggct gacgatggcg cgaaacgtca
    21181 gataggaaaa gacgttaaag ccggaataat atttgaccaa atgttcggcc agccaaacta
    21241 acatgtccca ttctcctgta aagcgcgtac tacctcttcc atggcggcac tacgtgaacc
    21301 cttaactaaa atcgtaatta cctgttgctc agcaatcagt gatttaagac gcgtaattaa
    21361 cgcagtttta tcagcaaaat gttcgccaac gccgctggcg gtgctgatag catggctttg
    21421 tttacccacg cttaacacgc ggtcaatacc agcagctttt gccgcctcgc ccacctgtac
    21481 atggcaggct tcgctttcag cgcccagttc cgccatatcg cccaccacca gcacgcggta
    21541 gcccggcatt tcagccagta cctgaacagc ggcggtcatt gaaccgacat tggcgttgta
    21601 ggagtcgtcg agcagcaact ggttttctgc cagttggatg gggaacagac ggcctggaac
    21661 agctttcaga tttgccagcc ccgctttgat agcatcaagc gttgcgccca cggacatgga
    21721 gagcgcagcg gctgccagcg cattcgcaat attgtgacgc cccggcaacg gcagcagaac
    21781 atcgacgcta ccggttgggg tttgtagggt aaattccgta ccgtgcgagg tcacatggat
    21841 attggtggcg gtgaaatcgc tgttggcggc attgggtgag aaacgccaca ctttgcgtga
    21901 gccaattacg ctctgccagt tcagccagtc gttgttgtcg gcgttcataa tggcgatacc
    21961 gttttccggc aggccgctaa agatttcacc tttcgctttc gcgacacccg caagcgagcc
    22021 aaaaccttcc agatgcgccg ctgccaggtt gttgaccagc gcagcttccg ggcgagtcag
    22081 actcacagtc caggctattt cgccctgatg gttcgcgcca agttcaataa ctgcgtaatc
    22141 gtattccggc gttaagcgca acaacgtcat cggtacaccg atgtcgttgt tgagattgcc
    22201 tgccgtataa agcgtgttgc cgcactggct taaaatcgcc gccgtcatct ctttaacgga
    22261 ggttttgccg gaggaacctg tcagagcaac cacgcgcgcc ggaacttgct ggcgaaccca
    22321 tgcagccagt tcaccaaacg ccagacgcgt atccttgacg attaactgcg gcaggtcgat
    22381 atccagcgga cggctgacca gtagtgcgcc cgcgccgcca gctttcgcct ggtcggcaaa
    22441 atcgtgggca tcaaaacgtt cgcctttcag ggcaacaaac aggcagcccg gcgtcagttt
    22501 tcgggtatca gtggttacag catcaagggt gatatctgca ccttgcagtt caccgttgag
    22561 aatgtcggta agttggctaa gggttacgct aatcatgcaa tcacccccag cagacgcgcc
    22621 accgtgacgc gatcggagta gtccagacgc tgattgccaa caatctggta atcttcatgg
    22681 cctttgcccg cgaccagcac cacatcgttc tctttagcct gcataacggc gcaagtcacc
    22741 gcttcagcac ggccttccat cactttggca tgtccggcat ctaacattcc cgccagaata
    22801 tcgttgatga tggcacgcgg ttcttcggta cgcgggttat cgtccgtcac caccgccacg
    22861 tcagcaaact cttcggcaat tgcgcccatc agtggacgct tacctttatc gcgatcgcca
    22921 ccacagccaa agacacacca cagcttgccc gcacagtgca gacgcgccgc ctgtaaggct
    22981 ttttccagtg catccggcgt atgcgcgtaa tccaccacca ccgtcggttt gcctggcaca
    23041 gtgaacactt ccatacgtcc gcaaaccggt tgcagacgcg cggcggtttt caacagatca
    23101 gccaatggat agccgagtgc caacagtgtc gccagcgcga gcagcaggtt gctgacgtta
    23161 aaagcgccta tcagatggct ttcaatttcg ccatcgcccc aacttgagct aaagcgaatc
    23221 gtcacaccgc tgtcgtgata gttcacgtcg atcactttta accagcgtcc gtgacagttc
    23281 ggattaatat gatcttccat tgataccgca accgcgtccg gcagctttgc cagccaacgg
    23341 cggcccactt catcgtcggc gttaataatc gcctgaccgc aatgatgttc agaataaagc
    23401 agccatttcg cagcttcgta gtgttccata tcaccatgat aatcaaggtg atcgcggctt
    23461 aagttggtaa agaccgacgc cgcaaatttc aatgccgcca cacggtgctg taccagcccg
    23521 tgggaggaaa cttccattgc gcaaaacgtc gcgccctgct ccaccagccc cgccagctca
    23581 tgctgaacat cgactgccga accggtggta ttttctgtcg ggatcacttt ccccagcaga
    23641 ccgttaccaa cggtgcccat taccgcgctg gtttcgccaa gcagttggct ccactgcgcc
    23701 agcagctggg tagtcgtggt tttgccgttg gtgcccgtta cgcctacgag acgtaaattg
    23761 tcagagggtt catggtaaaa gcggcccgcc agtgcagata aacgctcgtt gagctggctg
    23821 agatagatga ccggtacgcc gtgcatttca cggatttcac cgtcggtcgc ctcatctttc
    23881 gcctctgcaa taatggcagc cacaccttgc gctatcgcct gcgggatata tcgacgcccg
    23941 tccgcctgat gacctactac agctacaaag agatcgcccg ccgcagccac acggctgtcg
    24001 agtgtcatct ctcgcagtgc tcgcgaaggt gcgtctggca cccacggagc aagaaggtcg
    24061 cgcaaattac gatctgccac ctgtcccctc gccttgatta atcacaaatt catttttatc
    24121 gcccgttgtc agcgcatccg gctcgatgtt catggtacgc aatacgccgc ccatgatggc
    24181 accaaagacc ggcgcggaaa cggcgccgcc gtagtattta cccgcctgcg gatcgttgat
    24241 aacaacaacc agcgcgaagc gcggctgact cgcaggcgca acgcctgcgg tataagcaat
    24301 atatttattg atgtagcgac cgtccggccc gacctttttc gcggtaccgg ttttaatggc
    24361 gatacgatag cctttaatcg ccgccttcac gccgccgccg cccggtagcg ccacgctttc
    24421 catcatatgc accacggtgc ggacaatgga ttccgggaag acacgttcac cgggaaccgg
    24481 ggggtcaact ttggtaatcg acagtgggcg ataaatgccg tagctgccga tagttgcgta
    24541 gactcgcgct aactgtaacg gtgttaccat tagcccgtag ccgaaagaga aggtggccct
    24601 ctctatgtca gaccaccgtt gtttttgagg atataagcca ctgcgttctc cgaccaaccc
    24661 caaattggtc gcttttccca gtccaaaacg tgagtaagta tctactaacg ctgaggacgg
    24721 catcgctaac gccagcttgg aaacaccgac gttactcgac ttctgtaata ccccggtcag
    24781 ggttaattcg ctgtagcgtg ccacgtcttt gatttcgtgg ccgttaattc gataaggaat
    24841 ggtattgagt accgagtttt cccgcaccac gccacgttgc aacgcggtca tcaccaccat
    24901 cggtttaacc gttgagcccg gttcaaacac gtcggtgatg gtacggttac gcatcgcctc
    24961 tttcggcgtg ccgctcagat tgttagggtt gtatgacggg ctgttagcca tcgccagcac
    25021 ttcacctgtg ttgacatcca ccagcacggc gctaccagat tcagccttgt taaaggccac
    25081 cgcgttgttc agttcgcgat aaaccagcgc ctgcaggcgt tcatcaatac tcagcgccag
    25141 gttgtgcgct gcctggctgt cagtagaaga aatatcttca attacgcgac catagcggtc
    25201 tttacgcaca atgcgctcac ccggctgccc ggtaagccat ttatcgaaac tcttctcaac
    25261 gccctcaatc ccttgactat cgacgttagt aaagccaatg aggtgagcag tcacttcgcc
    25321 ggatggataa taacggcgag attcttcacg cagatgaata cccggcagtt tcagtttttt
    25381 gatgtagtcc gccatgtcag ggtttacctg acgcgccaga taaataaagc gccctttcgg
    25441 gttggcgtta atgcgggcag aaagctgatc cagcggaata ttgagcgcgt tagccagcgc
    25501 cttccagcgg tcaccgacgc tgataccgcc agcgtcatgc acttctttcg ggtcagccca
    25561 aatcgctttt accggcacgc tcaccgctaa cgggcgacca gaacggtcag taatcatgcc
    25621 gcgggaggtg gaaacttgct gaacgcgaag agaacgcatg tcgccctctt tcaccagcat
    25681 atccggggag ataacttgta accacgctac gcgtccgagc agaaaagcca gcgccaggag
    25741 aatacagccg cataacaacg caaaacgcca actaataaag ttggcatgtt cttcctgacg
    25801 ttttggtttc tgcgttttcg ccgctgcttt catgcgtcgc gtttatcctt atttttgcac
    25861 tacgatattt tcttgtgacg gatcaacatg ctgcatttgc agcttttccg tggcgatcct
    25921 ttccacccgg ctatggtcgc cgagcgcatt ctcttcaagg atcaggttgc gccattcaat
    25981 gtctaaagca tctcgctcca gcaccagttg ttcgcgctga gcggtcagta aacgggtatg
    26041 gtgcgccgtg gttaccacgg tcaccgccgt caaaataatg caaatgaaca ggcagagtgg
    26101 cagcttccca aatcgcaaaa gatcgtcacc gataacacca ggcaatgcat ggcgctcgtg
    26161 gcttcccatc gatcctttaa ctttgcttag agcttctgtc actctgctga tcatgcgttc
    26221 gtcctctctg cgatacgcag aactgaacta cgggcacgag gattctcagc cacctcttct
    26281 tcgcccggca ttaacttgcc taatgctcgc agctgacggc cacccagttt tttgagctgc
    26341 tcttcagtca tcggtaaccc tgccggaact tgcggaccgc ggctgttttc acgcataaaa
    26401 cgtttcacaa tacggtcttc cagcgagtgg aagctgatga tcgaaagccg cccacccggg
    26461 gccagcacgt tgagcgagct ttttagcgcc tgctctatct cctccagttc actgtttacc
    26521 caaatgcgca ccgcctggaa ggtacgggtc gcgggatgtt taaacttatc tttcaccggc
    26581 gttgcagcag ccacgacttc cgccagttct ttggtgcggg tcatcggctg ttcgcggtta
    26641 cgctcgacaa tggcgcgggc aatgcgtttg gcaaaacgct cttcaccata ggttttcaat
    26701 acccaggcga tatcggcttc ttctgcggtt tgtagccatt cagcggctga ctgcccacgg
    26761 gttgggtcca tacgcatgtc cagcggacca tcgcgcataa aggaaaagcc acgttcagca
    26821 tcatcaagtt gcggtgaaga gacgccaaga tcgaggagaa tgccgtcgat cttgccgata
    26881 agatcgcgct cggcaacgta ttcgcccagc gcggagaaag gtccgtggat gatggagaag
    26941 cgcggatcat caatagtctt cgcaacggcg atagcctgcg ggtcgcgatc gatcgccagc
    27001 aaacgcccct cttcgccaag ctgcgagagg atcagacgtg agtgaccacc gcgaccaaaa
    27061 gtcccatcaa tgtagatgcc atcaggacgg atattgaggc cattaacggc ttcatccagc
    27121 agcaccgtag tatgtttata gttttccatc attttataga gacaagtcct gcagtcgctc
    27181 cgataagtct ccagtagcca actgctctgc gtcgatatct tccttgacct gttgatgcca
    27241 ggttgtttca tcccacagct caaacttgtt gaactgtcca accagcatca cttcttttgt
    27301 cagcccggca tgttgccgca gtactggcgc gattaacaat cgacctgcgc catccatctg
    27361 acattcgctg gcatgaccta acagtaggcg ctgcacacgg cgctcaactg ggttcatgct
    27421 cgacagacgc gataattttt gctcgataat ttcccattca ggcagggggt aaagcagcag
    27481 gcacgggtga tgaatgtcaa tggtgcaaac catttgaccg gcagcgttct caagcagctg
    27541 ttcccgataa cgggtaggca ctgataagcg ccctttgctg tcgagattga ctaacgttgc
    27601 tccccggaac atgccagcct caccccttat tcccactttg ccccacaatt tcccactgaa
    27661 aggagtttac ggagcggagg aaaagcttgt caagccagtc acaaggcata ccgaggtaaa
    27721 aaacccgatg tttacggcta atatcagcgt tgtttatttt acgtccaacg cgcgaagcaa
    27781 attaacgtta tgaatagctg taagaaaaaa tccctcatcg tcatcactgt tttaaaatga
    27841 ctcactattt tccacagcaa atataaagtg tcagtttgcg acgcgagcgg cattttagga
    27901 catatcttcc ccggttaaca gtccttgtta cgtctgtgtg gcgcttgatg ccagcgggtt
    27961 tgcgcaaaag caaagaaaag tgtttgttaa atcggcaatt catcgccgca tgtaacaaaa
    28021 taatgcaaaa acgcgctgtc gatatcactt aattattgtg aatttcagct ggtgagttaa
    28081 ttaacgggcg ggtttaaaac catttatcaa taatagtcag gaatagtctt atttacttta
    28141 agcatattga tgtccagtcc cgtactctac gcgccagagg gaaattcacc tggcgcgtat
    28201 ttttgttcgc ggcttagcta cggctgagca caccgcggcg atagagatta cgtttaatgc
    28261 gcgttaaacc aggttttggc ttacgcggtt cgtccaggct tgccaggaca atctccagca
    28321 cacgctctgc gacatcgcgg tgacgttgag ccactgccag caccgggcac tgtaagaagt
    28381 cgagcagttc gttatcgcca aaggtggcaa ttgccaggtc agaaggcagt ttaccatcgc
    28441 gacgtagcgt gacatccatc accccttgca acaacgcaaa cgacgttgtg aacagcgcct
    28501 gcggcatcag atgcgtttcc agccattttt cgaataactg ggcagccgcc tcccgctcat
    28561 agctgttggc atacaggaaa tgcacttcgc gcggatcatc tttccaggca gtacggaaac
    28621 cttgttcacg caggaagctg acagaaagct ccggcagcgc gccaagataa agcaccgtct
    28681 cggcgggaaa cttacgtaac tcttccgcca gcatttcggc atcatcctga tcggcaccaa
    28741 ccacgctggt gaaatgttca cgatcgaggg cgcggtccag cgcgacaatc gggaacgggg
    28801 cgttagccca gcgttgataa aaaggatgct caggtggcaa cgacgtcgaa acaataatgg
    28861 catcaacctg acgctgtaaa aggtgctcaa tgcagcgcat ttcgttgtct ggctgatctt
    28921 ctgagcaggc aatcagcagt tgataacccc gttgccgcgc ctggcgctca agatagttag
    28981 cgatgcgggt atagctggtg ttctccagat cggggatcac aagaccaata gaacgtgtgc
    29041 gtccagcacg aagcccagct gccacggcgt tcgggtggta attgtgctca cgcaccacag
    29101 ccatgacttt ttcaacggtt ttgtcgctca cacggtattg cttcgctttg ccgttaataa
    29161 catagcttgc agtggtccgc gacactcccg ccagccgagc gatttcatcc agtttcacaa
    29221 ttgccccttg cgtaaaatgt aaaaaccata gccattgtac tggtatgggt taaattcatt
    29281 aacatctaag cgcagaaaat taactgcggc aactgctttt attccaggtt cccactgatt
    29341 tcgcaaaaaa agcccagcgt gacatgttgg gctgcaaatt gcacactgag atcattctca
    29401 acgcattatt ttatcgccgc gcgaaagtcc gaccacacca gagcgagcaa cttccacaat
    29461 tttcgccacc tcgcgaatcg atgctaaaaa tgcatcaagc ttatcgctgg tgcctgctaa
    29521 ttgaacggta taaagcgagg gggtgacatc gataatttgc ccacggaata tttccgtatt
    29581 acgtttcact tcgtcacgcc cgtaaccgct ggcctgaatt ttcaccagca tgatttcccg
    29641 ctcaacatgc gcgccctgcc ccaactcact cacgcgcaag acatcgacca gcttgtgtaa
    29701 ttgcttttcg atctgctcaa gtactttttc atcgcccacg gtctggatgg tcatacgcga
    29761 taatgtcgga tcgtcggttg gcgcaacggt caggctttca atgttgtagc ctcgctggga
    29821 aaaaaggcca atcacgcggg ataacgcgcc tgattcattt tcgagtaaga ctgataatat
    29881 ccggcgcata atcaggttct ctccgttttg cttaaccaca tttcatccat tccgcccccg
    29941 cgaatctgca tcgggtagac gtgctcactg ccatcgacgg taacatcaac aaacaccagg
    30001 cgattattgc gcacctgttc cagcgcctcg ctaagtttgc tttccagctc atgcggatga
    30061 gagatctgga tcccgacgtg accataggct tccgccagac ggacgaaatc gggtagtgat
    30121 tgcatataag attgtgaatg acggccggaa tagatcatgt cctgccactg tttcaccatc
    30181 cccagatagc ggttattgag attcaccacc agtacgggca actcgtattg caacgcggta
    30241 gacagttcct gaatgttcat ctgaatactg ccgtcgccag tgacgcaaac cacggtttct
    30301 tctggcaacg ccattttgac gcccagtgcc gcaggtaaac caaaacccat cgtgccgagg
    30361 ccaccggaat tgatccagcg acgcggtttg tcgaatggat aataaagtgc agcaaacatc
    30421 tggtgctgcc cgacatcgga cgtcacgtaa gcgtctccct tcgtcaaccg ccaaagagtc
    30481 tcgatcaccg cctgcggttt aatcttttca ctgtgagtgt catatttcag gcactgacga
    30541 gcgcgccact gttcaatttg ctgccaccag tcgcggatct catccagtgg ttgatgggcg
    30601 gattcttgcg acaagagttc aagcatttgt tcgaggacct ggcgagcatc ccccacaatc
    30661 gggatatccg cagtcacggt tttagaaatg gaaataggat caatatcgat atgcagaaca
    30721 gtggcatttg ggcagtactt tgccagattg ttcgtcgttc ggtcatcaaa tcgtaccccg
    30781 acggcgaaaa tcacatccgc gttatgcatc gtcatattgg cttcgtaggt accgtgcatt
    30841 cccagcatgc ccagtgcctg acgatgcgtt gccggaaacg cccccagccc catcaatgag
    30901 gaaacaacgg gcagattcaa cgcctccacc gtttctttca actgctgatg gcagcccgcc
    30961 atgattgccc caccgcctac gtagacaacc ggtttttttg ccactaccag cgtttgcaga
    31021 gcacgcttaa tttgcccttt atgtccggta gtagtgggat tgtaagaacg catactgacc
    31081 gactccggcc agacataggg taatttgttc gccggattaa gaatatcttt cggtaaatca
    31141 acgactactg gtccaggacg accacttgcc gccagccaga aagccttttt cagcacctgc
    31201 ggaatgtctt ccgtttgctt aaccagaaaa ctgtgtttaa ccactggtcg cgaaatcccc
    31261 accatgtcgc actcctgaaa ggcatcgtaa cctatcaacg aggtcgctac ctgcccggaa
    31321 aggacaacta atggaatgga atccatataa gcggtggcga tgccggtaat cgcattggtc
    31381 gcccctggac ccgacgttac cagcacgacg ccgacttccc cggtcgcgcg cgccagacca
    31441 tcggccatat gcactgccgc ctgctcatga cgaactaaaa catgatcgat accacccacg
    31501 gtatgcaatg catcgtaaat atcaaggact gcgcctccag gataaccgaa tacttgttta
    31561 acgccctgat cgataagcga tcggacgacc atctcggctc cagacaacat ctccatggcc
    31621 tgcctcactg tttgatggaa aaaatgtgta aaacacatta accgtccgat cttgcttaag
    31681 caattggcag ccagagacat aaacgcaggg taataagaat aaacaggagg aaagatgaaa
    31741 agaaacgata aaatcctcca ttacgaagga ttaaattgat aataaatcgg ctgaatccca
    31801 caacttacag caatttctct atttttttaa ttaatcctaa aatagagagc ccacacattc
    31861 agaataaaat tctacattca ataaaaaatg cagaataaac cagacattca tgtctgacct
    31921 attctgcatt cagttagcgt ttgcaaattg agactaattg ttcttccatc cactgatggc
    31981 ctttatcgcg cccggcagct tcatgccatg agagataaca ggttctgctg ttttgtttta
    32041 acggcagcgg taatacctgt aattctaagg attcagcgaa ctcttcagcc agccaacgcg
    32101 gcgcaatagc gaccaaatgc gtttgcgaca ccacgctaag tacgctcatc attgccatgc
    32161 cctgatacgc gatactggct tgcttatcta ccgtgtcata ccaaggttga ctaaatgacg
    32221 cgaaacgatc gagcgaaacc gccgcatgtt gttcgttata aacatcatgt ttcagtaacg
    32281 ggcctttaat tgttggatga tttttgctgg ctaccagcac catttcatct ttaaataatg
    32341 gcacgctggt aaattcagga cgatggaagt cttcataact aatcacaaac tccgtttcct
    32401 gataacgcag ctgatgttca gtgttctgat ttaatgaaga cttgaacata acatgtatat
    32461 ttggcgcaat ctgctcaatg tgattataaa tctgcgaggt cagaatgctg tctaacgggc
    32521 tgcaaacaca aagatgaaat acacgttcac tactcgcggg ttcaaaacct gaaccaggca
    32581 attcattttg tactagttgc aatgcctggc gaactgaacc aaaaagttga aatgcgcgag
    32641 cagtcggttg aataccacgg ccataacgaa caaaaagctc gtcattaaac atcaccttca
    32701 ggcgtgcaac agcgttactg accgcaggtt gcgacatacc cagaacatga gcggcacggg
    32761 taatgttttg ctcctgcatc acggcatcga aaacggttaa taagttgaga tcgaccatgc
    32821 gtagctgtgg cttgcttaac tccgccgtct ctgaatgatc tgtttgtacc tctggcatac
    32881 ttaactccac tgtcacactt aactcccttt cccttattgg aatgcagaga aataatcctg
    32941 aagaatatga tttatc
//
LOCUS       DADMIB010000029        32488 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.029, whole genome shotgun sequence.
ACCESSION   DADMIB010000029 DADMIB010000000
VERSION     DADMIB010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32488
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.029"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            196..990
                     /gene="panB"
                     /locus_tag="JNZ89_001298"
     CDS             196..990
                     /gene="panB"
                     /locus_tag="JNZ89_001298"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HAY8935228.1"
                     /translation="MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVG
                     DSLGMTVQGHDSTLPVTVADIAYHTASVRRGAPNCLLLADLPFMAYATPEQAFENAAT
                     VMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG
                     DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA
                     FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH"
     gene            1002..1853
                     /gene="panC"
                     /locus_tag="JNZ89_001299"
     CDS             1002..1853
                     /gene="panC"
                     /locus_tag="JNZ89_001299"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HAY8935229.1"
                     /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA
                     KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG
                     TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR
                     KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG
                     ERDLDEIIAIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID
                     NKIVELA"
     gene            complement(2145..3041)
                     /locus_tag="JNZ89_001300"
     CDS             complement(2145..3041)
                     /locus_tag="JNZ89_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8935230.1"
                     /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL
                     HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQGKPDKKMAFRMMRYSIAAM
                     HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
                     TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR
                     GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKG
                     MSREDVAEMTNLSLAEIDRLIN"
     gene            3315..3695
                     /gene="panD"
                     /locus_tag="JNZ89_001301"
     CDS             3315..3695
                     /gene="panD"
                     /locus_tag="JNZ89_001301"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HAY8935231.1"
                     /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI
                     DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR
                     PNVAYFEGDNEMKRTAKAIPVQVA"
     gene            complement(3699..4899)
                     /locus_tag="JNZ89_001302"
                     /pseudo
     CDS             complement(3699..4899)
                     /locus_tag="JNZ89_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000899461.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
     gene            complement(4994..5434)
                     /locus_tag="JNZ89_001303"
     CDS             complement(4994..5434)
                     /locus_tag="JNZ89_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HAY8935232.1"
                     /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML
                     SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA
                     CRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY"
     gene            complement(5539..6309)
                     /locus_tag="JNZ89_001304"
     CDS             complement(5539..6309)
                     /locus_tag="JNZ89_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8935233.1"
                     /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
                     LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT
                     HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
                     GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
                     LGINDVPLATTFGVLVVFIVVFYLICWSLIQRGRGLRS"
     gene            complement(6306..7232)
                     /locus_tag="JNZ89_001305"
     CDS             complement(6306..7232)
                     /locus_tag="JNZ89_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8935234.1"
                     /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
                     STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
                     SMKALLAKLKLETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS
                     EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA"
     gene            7341..8003
                     /gene="can"
                     /locus_tag="JNZ89_001306"
     CDS             7341..8003
                     /gene="can"
                     /locus_tag="JNZ89_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HAY8935235.1"
                     /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPHFLWIGCSD
                     SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG
                     GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH
                     STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN
                     HK"
     gene            complement(8044..8580)
                     /gene="hpt"
                     /locus_tag="JNZ89_001307"
     CDS             complement(8044..8580)
                     /gene="hpt"
                     /locus_tag="JNZ89_001307"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HAY8935236.1"
                     /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG
                     SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII
                     DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY
                     AQRYRHLPYIGKVILLDE"
     gene            8786..11176
                     /locus_tag="JNZ89_001308"
     CDS             8786..11176
                     /locus_tag="JNZ89_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose/quinate/shikimate family membrane-bound
                     PQQ-dependent dehydrogenase"
                     /protein_id="HAY8935237.1"
                     /translation="MAINNTGSRRLLVTLTVLFAALCGLYLLIGGGWLVAIGGSWYYP
                     IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI
                     WLILPFVWRRLVIPASGAVAALVVALLISGSILTWAGFNDPQEINGTLSADATPTEAI
                     SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV
                     TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPKLKTNESFQHVTCRGVSYHEAKAE
                     TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE
                     PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD
                     EHTFTFNSPNSWTPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT
                     GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV
                     VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPKKDLSGADMWGATMFDQLVCRVMFHQM
                     RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN
                     PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV
                     VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN
                     GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK"
     gene            complement(11223..12773)
                     /gene="cueO"
                     /locus_tag="JNZ89_001309"
     CDS             complement(11223..12773)
                     /gene="cueO"
                     /locus_tag="JNZ89_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HAY8935238.1"
                     /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA
                     RNRIQLTIGAGQSTFGEKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW
                     HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV
                     VIEDDEILKLMLPKQWGIDDVPVIVQDKKFNADGQIDYQLDVMTAAVGWFGDTLLTNG
                     AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL
                     MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL
                     SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN
                     MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT
                     QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT
                     GMMLGFTV"
     gene            12939..13286
                     /locus_tag="JNZ89_001310"
     CDS             12939..13286
                     /locus_tag="JNZ89_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacC family pilotin-like protein"
                     /protein_id="HAY8935239.1"
                     /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND
                     CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA
                     LARDSLSLLAYVK"
     gene            13392..14258
                     /gene="speE"
                     /locus_tag="JNZ89_001311"
     CDS             13392..14258
                     /gene="speE"
                     /locus_tag="JNZ89_001311"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HAY8935240.1"
                     /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG
                     RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
                     SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT
                     DPIGPGESLFTSAFYEGCKRCLNPSGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF
                     YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP
                     QYLQDALASQPS"
     gene            14274..15068
                     /gene="speD"
                     /locus_tag="JNZ89_001312"
     CDS             14274..15068
                     /gene="speD"
                     /locus_tag="JNZ89_001312"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HAY8935241.1"
                     /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
                     ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP
                     ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
                     VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML
                     LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV"
     gene            complement(15105..15467)
                     /locus_tag="JNZ89_001313"
     CDS             complement(15105..15467)
                     /locus_tag="JNZ89_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414661.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HAY8935242.1"
                     /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ
                     AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG
                     VEDFLQVVAAYRNFVQQK"
     gene            complement(15642..18239)
                     /gene="acnB"
                     /locus_tag="JNZ89_001314"
     CDS             complement(15642..18239)
                     /gene="acnB"
                     /locus_tag="JNZ89_001314"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HAY8935243.1"
                     /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF
                     LLDLLTNRVPPGVDEAAYVKAGLLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL
                     IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFMNRP
                     ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQLGVVG
                     PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG
                     KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV
                     LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA
                     CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
                     PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
                     PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
                     KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI
                     VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL
                     CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP
                     TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
                     TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA
                     DGVIFQTAV"
     gene            18594..20447
                     /locus_tag="JNZ89_001315"
     CDS             18594..20447
                     /locus_tag="JNZ89_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HAY8935244.1"
                     /translation="MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAAVETQSTQ
                     LAVSDAAAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTY
                     PANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL
                     GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSNEQKVITTTKKAVPVKQTVTAPVIPSN
                     TVLTASPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP
                     FIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNGWQHN
                     GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSA
                     TQLPAPTRDSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFS
                     RRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQRREAARERIQPASPEQRQ
                     AVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSA
                     SPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSERGARRLER"
     gene            complement(20518..21942)
                     /gene="lpdA"
                     /locus_tag="JNZ89_001316"
     CDS             complement(20518..21942)
                     /gene="lpdA"
                     /locus_tag="JNZ89_001316"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HAY8935245.1"
                     /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
                     CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA
                     GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
                     RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI
                     VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN
                     GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
                     ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNPKAKKK"
     gene            complement(22267..24159)
                     /gene="aceF"
                     /locus_tag="JNZ89_001317"
     CDS             complement(22267..24159)
                     /gene="aceF"
                     /locus_tag="JNZ89_001317"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HAY8935246.1"
                     /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
                     EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
                     AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
                     KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE
                     VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM
                     IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR
                     RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV
                     DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK
                     RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV
                     PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN
                     APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD
                     IRRLVM"
     gene            complement(24174..26837)
                     /gene="aceE"
                     /locus_tag="JNZ89_001318"
     CDS             complement(24174..26837)
                     /gene="aceE"
                     /locus_tag="JNZ89_001318"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HAY8935247.1"
                     /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA
                     RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
                     ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ
                     EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
                     DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII
                     NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
                     REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHSI
                     KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT
                     YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK
                     NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
                     QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
                     IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
                     QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
                     EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
                     VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
                     LAKRGEIDKKVVADAIAKFNIDADKVNPRLA"
     gene            complement(26998..27762)
                     /gene="pdhR"
                     /locus_tag="JNZ89_001319"
     CDS             complement(26998..27762)
                     /gene="pdhR"
                     /locus_tag="JNZ89_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex transcriptional
                     repressor PdhR"
                     /protein_id="HAY8935248.1"
                     /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
                     DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE
                     TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA
                     AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR
                     EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN"
     gene            28303..29676
                     /gene="aroP"
                     /locus_tag="JNZ89_001320"
     CDS             28303..29676
                     /gene="aroP"
                     /locus_tag="JNZ89_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter AroP"
                     /protein_id="HAY8935249.1"
                     /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
                     GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL
                     YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK
                     VIAVVAMIIFGGWLLFSGNSGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE
                     LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF
                     HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV
                     NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG
                     VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT
                     AKAVKAH"
     gene            complement(29719..30573)
                     /gene="ampE"
                     /locus_tag="JNZ89_001321"
     CDS             complement(29719..30573)
                     /gene="ampE"
                     /locus_tag="JNZ89_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase regulator AmpE"
                     /protein_id="HAY8935250.1"
                     /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL
                     GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND
                     SHARVTMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGIWGPV
                     TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL
                     PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL
                     LTIYGALV"
     gene            complement(30570..31121)
                     /gene="ampD"
                     /locus_tag="JNZ89_001322"
     CDS             complement(30570..31121)
                     /gene="ampD"
                     /locus_tag="JNZ89_001322"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HAY8935251.1"
                     /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG
                     GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY
                     QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDRYPDIANNMTGHCDIAPD
                     RKTDPGPAFDWARFRALVSKETT"
     gene            31209..32102
                     /gene="nadC"
                     /locus_tag="JNZ89_001323"
     CDS             31209..32102
                     /gene="nadC"
                     /locus_tag="JNZ89_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HAY8935252.1"
                     /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND
                     ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ
                     PLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR
                     SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN
                     LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD
                     FISVGALTKHVQALDLSMRFR"
     gene            32305..>32488
                     /locus_tag="JNZ89_001324"
     CDS             32305..>32488
                     /locus_tag="JNZ89_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HAY8935253.1"
                     /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ
                     TFVPYRTAVELCALEHG"
BASE COUNT         7831 a         8834 c         8004 g         7819 t
ORIGIN      
        1 ccacgctaca acaggatgga actataccaa tagaagctgg tgagtttaaa gccaccagta
       61 ctttccaggt aacctaccct taataagtcc accgcaccgc catcatctgg cggtgcggta
      121 attgataaat cattgccccc accaatgtga ctgataaaat gccaggcaac acgacatcat
      181 ttatcaggac acgttatgaa accgaccacc attgcttcac ttcagaaatg taagcaggat
      241 aaaaagcgtt tcgcgaccat caccgcttac gactacagct tcgcgaaact atttgctgat
      301 gaaggactta acgtcatgct ggtaggcgac tcgctgggca tgacggttca gggtcacgac
      361 tccaccctgc cggtgaccgt tgccgatatc gcctaccaca ctgcctccgt acgtcgtggt
      421 gcgccaaact gcctgctgtt ggctgacctg ccgtttatgg cgtatgccac gccggaacaa
      481 gcctttgaaa acgccgcaac ggttatgcgt gccggtgcca atatggtcaa aattgagggc
      541 ggtgagtggc tggtcgaaac cgtaaaaatg ctgaccgaac gtgccgttcc tgtatgtggt
      601 cacttaggtt taaccccaca gtcagtgaat attttcggtg gctacaaagt tcaggggcgc
      661 ggcgatgaag cgggcgatca actgctcagc gatgcattag ccttagaagc cgctggggca
      721 cagctgctgg tgctggaatg cgtgccggtt gaactggcaa aacgtattac cgaagcactg
      781 gcgatcccgg ttattggcat tggcgcaggc aacgtcactg acgggcagat cctcgtgatg
      841 cacgacgcct tcggcattac cggcggtcac attcctaaat tcgctaaaaa tttcctcgcc
      901 gaaacgggcg acatccgcgc ggctgtgcgg cagtatatgg ctgaagtgga gtccggcgtt
      961 tatccgggcg aagaacacag tttccattaa ggagtcacgt tgtgttaatt atcgaaaccc
     1021 tgccgctgct gcgtcagcaa attcgccgcc tgcgtatgga aggcaagcgc gtggcgctgg
     1081 tgcctactat gggtaatctg cacgatggcc atatgaagct ggtcgacgaa gccaaagccc
     1141 gcgccgatgt ggtcgtcgtc agtattttcg ttaacccgat gcagttcgac cgcccggaag
     1201 atctggcacg ttatccacgg accttgcagg aggactgcga gaagctaaac aaacgtaaag
     1261 tggatttagt tttcgcccct tcggtaaaag agatctaccc gaacggtact gaaacccata
     1321 cttacgttga cgttcccggg ctttcgacca tgctggaagg cgcgagccgt ccggggcatt
     1381 ttcgcggcgt ttcgactatc gtcagcaagc tgtttaacct ggtccagccg gacatcgcct
     1441 gcttcggtga aaaggacttt cagcaactgg cgctaatccg caaaatggtt gccgatatgg
     1501 gcttcgatat tgaaattgtc ggcgtcccga ttatgcgcgc caaagatggc cttgcgctca
     1561 gttcccgtaa tggttatctg acggcggaac aacgcaaaat tgcgcccggt ctgtacaaag
     1621 ttttaagttc aattgccgac aaattgcagg ctggcgagcg ggatcttgat gaaattattg
     1681 ccattgcagg gcaagaactg aatgaaaaag gcttccgcgc cgatgatatt cagattcgcg
     1741 atgccgacac gttgctggaa gtctctgaaa ccagcaaacg agctgtaatt ctggtagccg
     1801 cctggcttgg cgatgcccgc ctgatcgaca acaaaatcgt cgaactggcg taatgctttt
     1861 actctaaata attcaagttg caggaaggcg gcaagcgagt gacaaattcg tcaggaacga
     1921 atttgcccag ccgcaggctg gccttcggtg agagacatgg atgtctctca ttaatcccca
     1981 ggagcttaca taagtaagtg actggggtta gcgaacgcag acacagcaca tgcaatttaa
     2041 agtatgacga gtataactgg cgctacggct gatggcgcca attattaatt tgccccacgt
     2101 catggcgatg gcgtctgtaa gcaattattc ataacgcaga caacttagtt aatcagccta
     2161 tcaatctcag caagagataa atttgtcatc tctgcaacgt cttcccgaga catcccttta
     2221 ctcagaaaac gctgggcgaa ttcttgcctt tcctcctgtc ttccctgctg aatccccttc
     2281 tcaatccctt tctcttcaaa ccactgcgcc agcgtcatca tagactcccc tcccgtttcc
     2341 ctgtctctca gcacaccata aaacaaatcc gcttgttcag tatgaccgcg ttgcagcata
     2401 tagttttgca tggcaactaa ctgacttccg ctagtgtacc cttcgtcaat cagcgtgacc
     2461 agttgctcca gcaataacat taagtcgcgc tggcgaatat gtttttgcag tagttcgaga
     2521 atcgcaatcc gccgatgttg catgatttcg tcatccggtg tgatggtgat atccaccagc
     2581 gggaaaggac tgttatagac gcgtcgtgcc agctccggcg agtaaaatat atcaaaccag
     2641 cacattgaga gcggataagg tgtggcctcg ccctgataaa acagtatcgg caccaccagc
     2701 ggcagcttat cgtgatccgc ctccagatgc cggtgcatgg cagcaataga ataacgcatc
     2761 atgcgaaagg ccattttctt atccggcttg ccttggtgtt caatcacaac atgcagataa
     2821 ccgggattgc cctgcatttg cacggaatag agcacgtccg tgctgtgtcc tttcaggctc
     2881 tcttcaatga aactccccga ctctaaatga agcgtgttga ggtcacaaag ttctcgtaat
     2941 tccactggca aatgtatctc cagaaagtcg cgagccgtct ccgcgtgcat taaaaattgt
     3001 ttaaacactg catcatgcgg tgtggtactc ggtgcatcca tcttccctgc cttccgtgtt
     3061 gtcttgcgtg aaggcagtat ccagtcaagg cgtgccatcg tcagccacct ctttagtgtt
     3121 taccgagcag cgttcagaga aatttcaatt ggttacagcc gttacatggc acgcttcggc
     3181 acggtacgca aactgctgat gtaaatgccg tcagatgagt agacactaaa caaaaatcgg
     3241 gcaatactgc gtgagaattt cctcaaagca ggcatcgcct gcttcgttaa cgacagggta
     3301 gaaaggtaga agttatgatt cgcacgatgc tgcagggcaa actccaccgc gtgaaagtga
     3361 ctcatgcgga cctgcactat gaaggttctt gcgccattga ccaggatttt cttgacgcag
     3421 ccggtattct cgaaaacgaa gccattgata tctggaatgt caccaacggc aagcgtttct
     3481 ccacttatgc catcgcggca gaacgcggtt cgagaattat ttctgttaac ggtgcggcgg
     3541 cccactgcgc cagtgtcggc gatattgtca tcatcgccag cttcgttacc atgccagatg
     3601 aagaagctcg cacctggcga cccaacgtcg cctattttga aggcgacaat gaaatgaaac
     3661 gtaccgcgaa agcgattccg gtacaggttg cttgattgtt atccctgcgg ctggttactc
     3721 accagccgcg acatcgtctc cagcgaatcc gttcttaaga tataaagtcg ttttagtaac
     3781 aacggattat cccccggttt tactttgcct ttcatggttg tcaccgccag gtgaaatccg
     3841 gcatcgtttg ctgccttcac ggctttgtca ttaaatccgc caaacggata cgaaagatac
     3901 cagacatgcg gattaaattg cgccagagcg cggcgtgaac gtgcaaaatc aaacagaata
     3961 ttgtgttcac tacggctcgg taatatgggg cggcgataac catccacccg atgcaaaaaa
     4021 tgggtatgtg actggaaatc aaaaacatcg cgaatttcgt taagttcaga aacgctcata
     4081 aattgcagcg attttgggtc ccacttctgc gggtgacgtt tgatgcgcga ggtaacaata
     4141 aacgccgtcg ccttcatgcc atattgtttc aacacgggat acgcatagcg gctcaccgat
     4201 ttgaggccat catcaaaggt aatcaccacc gctcgcgcag ggagattgat cttattcttc
     4261 acgtaacctt ccagctgcac catgctcagt gtcgcgtatc ccctgtcgcg cagccaggcc
     4321 atctggttat tgaaagcgcg tactgaggtg gtcgtcgaag tatggcgaaa acgggtgttt
     4381 tcttcatcgc gcagaatatg gtgataggtt agcaccggca ggccattatc gggttgggca
     4441 tccagcgcgc tgatataggc cagtcgatcg ccaatacgga tctgatacca ggtttgattt
     4501 aacctgtctt tcagtttatg caaaatcggg tagcgcaaat tgtccgccag taccccataa
     4561 tggcgcactg cccgcactcg gcgcgttata gaccggcgta tctttccagg taattaagtt
     4621 ctgattactc agcggcttgt tgaggtcacc caaaccgtct tcaacttttt gtcgcccctg
     4681 aactggctcg agatgccctt tatcgataaa ccctttacca aagccaaaat taaatgcgta
     4741 ataacttgcg gcagtgggct ccacggcaat gatttgcccg gcccgaatat tccccacggt
     4801 caccatcttg tcgccaattt gcgcccagat cgcagcattt tcgatggttt gcatataacg
     4861 ggcaggtaac gcggcactaa cgcttgcggt aaacagcatc agcaggatga ataacagctt
     4921 gtttatacat gaaaaaataa ccgagggtga aacaacgctt gtattgtagc aaaagcgcca
     4981 tcagaatcgc gggttaatac tcatacaaat tatgtttgag gacaaaaggc ggattttttt
     5041 gttgttggtg ccaaagacta ctcacctccg gcgcacccag ttcgacaata cgctcgcgaa
     5101 actctgaact ggtcatggtt tcacggcaag ccatcatctg ttcaattaac ggtaacgtga
     5161 caccagaaat cacttcacaa cgggagtgtt tatggcttaa taatgaagcc acgcggtacg
     5221 gtggcgctcc ggctatatcg gttaagaaga tgacaccctc accagagtcc gcttcatgca
     5281 gagcatcgca catcatgcgg ctgagcatat tagagcttaa tccgcgccag aaattcacgg
     5341 cccggcactg aagaagtgcc ccatgttttt tctccagcgc atccagtatc tcttgcgccc
     5401 ggtcatcgtg acaggtaatt acccaaccta acatcgcctt cctccttagc cgaaaatcag
     5461 tctatcctga ccattgttga taaagggtga tagccgtcaa aactcctctc ccccgaatcc
     5521 agaggagagg aaatagcctt agctacgcaa accacgtcca cgttggatca gcgaccaaca
     5581 gatcaaataa aacaccacaa taaagaccac cagtacgcca aaggtagtgg ccagcggcac
     5641 atcatttata ccgaggaagc cgtagcggaa accactgatc atataaacga ttgggttcag
     5701 gtgcgacagc ccttgccaga acggcggcaa caaagtcagg gagtaaaaca ccccgcccaa
     5761 atacgtgagt ggcgttaaca caaaggttgg caccaggctg atgtcatcga acgttttggc
     5821 aaacacgccg ttcagcaaac ccgcaaggga gaatagcacc gccgtgagca ccagggttaa
     5881 ggcaacgaat acccacgaat gcacctgaaa cggcacaaaa aacagtgaaa ttgccgtcac
     5941 cagaatgcca acaaacagac cacgcgccac gccaccgccg acatatccgg caataatgac
     6001 gtgagtcgga accggcgcta ccagcagctc ttcaatatta cgctggaact tggcaccaaa
     6061 aaatgatgac gcgacgttag cgtaggcatt ggtgatcacc gacatcatga tcagccccgg
     6121 tacgatgaac tgcatatagc tgaagccatg catatcgcca atacgcgaac ctatcaggtt
     6181 accgaagata ataaagtaaa gggtcatggt gatgactggc ggcaccagcg tctgcaccca
     6241 gatacgcata aagcgatgga tctctttcgc ccagatgctt tttagcgcca cccagtaaag
     6301 atgcatcatg cgcgatctcc ttgtttttca ttaaccagtg aaacaaacag ctcttccaga
     6361 cggttagctt tgttacgcat acttaatacc tgaatgccct gctcacttaa ctgcgtaaat
     6421 acgctgttga tcccctgctc acgcagcact tcaacttcca gcgtcgcggt atcgaccagt
     6481 cgatactgat agccatcgag cttcggtaac gggcttttcg gtgcgagatc gagaataaag
     6541 gtttccaatt tcagcttcgc cagcagcgcc ttcatcgagg tattttccac cagctcaccg
     6601 tgttgaataa tgccgatatt gcggcacagc atttctgctt cttccaggta gtgtgtagtg
     6661 agaatgatgg tggtgccttt gtcgtttaaa tccttcaaaa agccccacat tgagcggcga
     6721 agttcaatat ccacgcctgc ggtcggttcg tcgagaatca gtagtttagg ttcatgcatt
     6781 aacgcacggg caatcattaa acggcgcttc atcccgccag ataacatacg cgcacgttcg
     6841 ttgcgttttc cccataaatc gagttgtttg agatattttt cgctgcggat gtacgcttct
     6901 ttgcgctcca cgccgtagta ccctgcctga ttcaccacaa tttgctgcac ggtttcaaac
     6961 gggttgaagt taaattcctg cggcaccagt cccaactgac gtttagcgtt cacgacatcc
     7021 ttctcgagat cgtaaccaaa tacgctgacc cgcccggagg ttttatttac cagagagctg
     7081 ataataccga tagtggtcga tttcccggcc ccgttcggcc cgagaagcgc ataaaaatca
     7141 cccgcttcga cctgcaaatc tattccacga agcgcctgaa cgccgcctgg ataggttttt
     7201 ttaagctgtt gaagttccag tgcaatggtc ataaattttt acttacctta cgttcttaca
     7261 ctttatctgt ggtttaaatc gtcccggagt tgccctatat tagccaaacg taattatttg
     7321 gttacaggtc gttaacctcc atgaaagaca tagatacact catcagcaac aatgcactat
     7381 ggtcaaaaat gctggtggaa gaggatcccg ggttttttga gaaactggca caagcgcaaa
     7441 aaccgcactt tctatggatt ggatgttccg acagtcgcgt tcctgcagaa cgtttaaccg
     7501 gtcttgagcc gggcgaactc tttgttcacc gtaatgttgc taacctggtc attcacaccg
     7561 acctgaactg cctttccgtg gttcagtatg cagtggatgt actagaagtt gaacacatta
     7621 ttatctgtgg ccactacggt tgcggcggcg tacaagccgc agttgaaaac ccggaactgg
     7681 ggcttatcaa caactggctg ctgcatatcc gcgatatctg gttcaaacat agctcattgc
     7741 tcggcgaaat gccgcaagag cgccgtctgg ataccttgtg tgaactgaac gtcatggaac
     7801 aggtgtataa cctaggccac tccaccatta tgcaatcagc gtggaaacgc gggcagaaag
     7861 ttaccattca cggctgggcc tatggcattc acgacggctt gctgcgtgat ctggatgtta
     7921 ctgccaccaa ccgcgaaacc cttgagcaac gttaccgtca cgggatttcc aacctcaagc
     7981 tgaaacacgc caaccacaaa taaaaatgcc atgccggatg caacacatcc ggcaacttca
     8041 cacttactcg tccagcagaa tcactttgcc gatatacggc agatgacggt aacgctgtgc
     8101 gtaatcaatg ccgtaaccca ccacaaactc atccgggatc gagaaaccga taaattctac
     8161 cgggacgttc acttcacgac gggacggttt atccagcagc gtacaaatcg ccagcgactt
     8221 cggttcgcgc aggcttaaga tctcacgcac tttcgacagt gtattccccg agtcgatgat
     8281 atcttcaaca atcagcacgt ccttgccacg gatatcttca tccagatctt tgaggatttt
     8341 cacatcacgg gtggtggaca tgccgctacc gtagctggag gcggtcataa agtcgacttc
     8401 atgagatacc tgaacttcac ggcacaggtc cgccataaac ataaatgagc cacgcagcag
     8461 acccaccagc accatatcgc tgccgctgtc tttgtaacgc tcagtaatct gacgacccag
     8521 ttcggcgata cgcgctttaa tctccgcttc ggggatcatt acttctacag tatgtttcat
     8581 atctctaacc atatgattta aaaacaaatc acttcgcacg ggcaggtttt ggcaccgcaa
     8641 caaagcgcaa gacacgcagt ataccagtaa aactattcat tcgcggaatc tgttaataaa
     8701 gctcgaattg tgatgacgat cacacatgtt aaaacctata attaattgct actaaaatat
     8761 taatgaattg aaatggtgtc tctttatggc aattaacaat acaggctcgc gacgattact
     8821 cgtcacgcta acagtccttt ttgcagcgct ttgcgggctg tatctactca ttggcggagg
     8881 ctggctggtc gcgattggcg gctcctggta ctaccctatc gctggccttg tgatgctcgg
     8941 cgtcgcctgg atgctgtggc gcagtaaacg tgccgcgctt tggctatacg ccgccctgct
     9001 gctcggcacc atgatttggg gcgtctggga agttggtttc gacttctggg cgctgactcc
     9061 gcgcagcgat attctggtct tcttcggcat ctggctgatc ctgccgtttg tctggcgtcg
     9121 cctggtcatt cctgccagcg gcgcagttgc cgcactggtg gtggcactgc tgattagcgg
     9181 tagtatcctg acctgggccg gatttaacga tccgcaggaa atcaacggca ccttaagcgc
     9241 cgatgccaca cctacggaag ctatctcacc cgttgccgat caggactggc ctgcctatgg
     9301 tcgcaatcag gaaggtcaac gcttttcacc tctgaaacaa attaacgccg ataacgtcca
     9361 taatctgaaa gaagcctggg tgttccgtac tggcgatgtg aagcagccga acgatccggg
     9421 cgaaatcacc aatgaagtga cgccgattaa agtgggcgac accctttacc tgtgtaccgc
     9481 tcaccagcgc ctgtttgcgc tcgatgccgc cagcggcaaa gagaaatggc attacgatcc
     9541 taagctgaaa actaacgagt ctttccagca cgtaacctgc cgtggcgtct cttatcatga
     9601 agccaaagca gaaacggctt cgccggaagt gatggcggat tgcccgcgtc gtatcattct
     9661 tccggtcaat gatggtcgac tgattgcgat taacgctgaa aacggcaaac tgtgcgaaac
     9721 cttcgccaat aaaggcgtgc tcaatctgca aagcaatatg ccagacacca aaccgggtct
     9781 gtatgaaccg acttcgccac cgattatcac cgataaaacc atcgtgatgg caggttcagt
     9841 taccgataac ttctcaaccc gcgaaacgtc tggcgtgatc cgtggttttg atgtcaacac
     9901 cggggagctg ctgtgggctt ttgatcccgg cgcgaaagat ccgaacgcaa tcccgtctga
     9961 cgaacacacc tttaccttta actcgccaaa ctcctggaca ccagcggcct atgacgcgaa
    10021 gctggatctg gtctatctgc cgatgggcgt gaccacgccg gatatctggg gcggtaaccg
    10081 cacaccggaa caggaacgtt atgccagctc gattctggcg ctgaatgcca ctaccgggaa
    10141 actggcgtgg agctaccaga ccgttcacca cgacctgtgg gacatggatc ttccggcaca
    10201 gccgacgctg gcggacatca ccgttaatgg tcagaaagtg ccagttattt acgctccggc
    10261 gaaaaccggc aacatttttg tgctcgatcg tcgcaatggc gaactggtgg ttccggcccc
    10321 ggaaaaaccg gtgccgcaag gtgctgcgaa aggcgattac gttactccga cccagccgtt
    10381 ctctgaactg agcttccgtc cgaagaaaga tttgagcggt gcggatatgt ggggagccac
    10441 catgtttgac caactggtgt gccgcgtgat gttccaccag atgcgctatg aaggcatttt
    10501 cacgccgcca tctgaacagg gcacgctggt cttcccgggt aacctgggaa tgtttgaatg
    10561 gggcgggatt tccgttgatc caaatcgtga agtggcaatt gccaacccaa tggcactgcc
    10621 gtttgtttcg aaactgatcc cacgcggtcc gggtaacccg atggagcagc cgaaagatgc
    10681 caaaggcacg ggtacggaat ccggcattca gccacagtac ggtgtaccgt atggtgtcac
    10741 gctcaacccg ttcctctcac cgtttggtct gccgtgtaaa cagccagcat ggggttatat
    10801 ctcggcgctg gatctgaaaa ccaatgaagt ggtgtggaag aaacgtattg gtacgccgca
    10861 ggacagtatg ccgttcccga tgcctgtacc ggtgccgttc aatatgggta tgccgatgct
    10921 gggcgggcca atctccacgg cgggtaacgt gctgtttatc gccgctacgg cagataacta
    10981 cctgcgcgct tacaacatga gcaacggtga aaaactgtgg cagggtcgtt taccagcggg
    11041 tggtcaggcg acgccaatga cctatgaagt gaatggtaag cagtatgtgg tgatctccgc
    11101 aggcggtcac ggttcatttg gtacgaagat gggcgactat attgtggctt atgccctgcc
    11161 ggatgatgtg aaataaccat aatgcccgga gagatccggg catatttccg aatacggtct
    11221 ttttataccg taaaccctaa catcatcccc gtatcttcat gctccagcag atggcagtgc
    11281 gccatataag catgttcttt cggtgcgtcg tgattaaact tcaccagcac ttcactgaca
    11341 ttgccttcta ccttaacggt atctttccag cccgcgcgat gagccgctgg cggtttgcca
    11401 ttttctgaca agatacggaa ctgcgtgccg tgaatatgga acggatgcag catcatgtcg
    11461 cccacgccag agataaccca acgttcgtac tgccctttcg ccgccgcaaa catcggctta
    11521 ttcatatcaa acgcctgacc gttgatttta ttggcatggt ggaaatcgaa cttcccgccg
    11581 tggttcatat gattcatatt accgtgcccc atatggccca tcatctggct gtgatccatt
    11641 ccggccatcg cctgatcgcc atatttctcc attagcatct gcatacccat catatcgagc
    11701 atcgggtcca tagaaagttg cagcttgcgt accgtcagcc cttccagcga aggtaacgca
    11761 ggcaggctac ttaatgtgtc tggcaaagca ccggaggcac taatagcaat cggctgaatc
    11821 cgcattaccg gatgcggctt gtcaaacggc gcaatcgcca tccccatctg gctgaccggt
    11881 agcgtcacca ggtcaaaggg tttgttgtcg ttaacctcca ccagcacttc aaaacgctcg
    11941 cccatcagca ccggcagctc gctcaccttc accggttcag gtagcagacc accgtcgctg
    12001 gcaatcacat acagcgggcg attgtcgctg gtggcgaaat tgagcgagcg ggcattacag
    12061 ccattgagca aacgcaggcg cagccaacca cgcggggcag cgtgttgtgg gtagattgca
    12121 ccgttggtca gcagcgtatc gccaaaccag cccacggcgg cggtcatcac atccagttga
    12181 taatcaatct gcccatcagc gttaaatttt ttatcctgaa caatcaccgg aacatcatcg
    12241 ataccccact gttttggcag cattaatttc aggatctcgt catcttcaat taccaccagc
    12301 ccagccaacc ccatcgccac ctgtcgccca gtcttgccat gttgatgtgg atggaaccag
    12361 caagtagcgg caggttgatc aacgttcaac gtcaccgagc gcttgccacc tggcggaata
    12421 attccctgcg ggccgccgtc gacttcaccc ggtacttcca gcccgtgcca gtgcaacgtc
    12481 gtctcttccg tcagttggtt atagatatca accgttaccg ctttgccgcg ctgtaatttc
    12541 accgccggcc ccagcagatt gccgttatag ccccaggtag ttgcagtttt ctcgccaaag
    12601 gtagactgac ctgcgccaat agttaactga atgcgattac gggcatcggt cgtgagcaaa
    12661 tcagggatcg gtaacgttgg gcgttccgcc gcaaagactg cgcggctcca cagcggcaag
    12721 gctgaagcca cacccagcgc gacggaatat tttaagaaat cacgacgttg catagttatt
    12781 tccttattct taagcaggcg aaacaaaatc aaacgttgag catagtcctt ccccttacgg
    12841 gaaggtcaag ccgcagacac aatttaatcg acaataatgg tcgtcgcctc gctcgcagtg
    12901 tgctaacgtt tatcttcttt aagcccctgg tagaagcaat gaagacgttt ttcagaacag
    12961 tgttattcgg cagcctgatg gccgtttgcg caaacagtta cgcgctcagc gagtctgaag
    13021 ccgaagatat ggccgattta acggcagttt ttgtctttct gaagaacgat tgtggttacc
    13081 agaacttacc taacgggcaa attcgtcgcg cactggtctt tttcgcccag caaaaccagt
    13141 gggatctcag taattacgac accttcgaca tgaaagccct cggtgaagac agctaccgcg
    13201 atctcagcgg cattggcatt cccgtcgcta aaaagtgcaa agccttggcc cgcgattcct
    13261 taagcctgct tgcctacgtc aaataatccc tgataccttt ttgtagaaat attgaccgtg
    13321 catccgcggt caatgttagc tattatgttg cgcccttttt ttacgggtgt taacaaagga
    13381 ggtatcaacc catggccgaa aaaaaacagt ggcatgaaac gctacacgac cagtttgggc
    13441 agtactttgc ggtagataac gttctgtatc atgaaaagac cgatcaccaa gatctgatca
    13501 tttttgagaa cgctgcattt ggtcgcgtaa tggcgctgga tggcgtagta caaaccaccg
    13561 agcgcgacga gtttatctat catgagatga tgacccatgt tccgctactg gcccacggtc
    13621 acgcgaaaca tgtgctgatt atcggcggcg gcgacggtgc catgctgcgt gaagtaaccc
    13681 gacataaaaa cgttgagtca atcacgatgg tggaaatcga tgcgggtgtc gtgtcgttct
    13741 gccgtcagta tctgcccaac cataacgccg gtagctacga cgatccgcgc tttaagctgg
    13801 tgatcgacga tggcgtcaat ttcgttaatc aaaccagcca gacctttgat gtcattatct
    13861 ccgactgcac cgatcctatc ggtcccggcg aaagtctgtt cacctcagca ttttatgaag
    13921 gctgcaaacg ttgcctgaat cctagcggta tcttcgtcgc acaaaacggc gtctgctttt
    13981 tacagcagga agaagccatc gacagccatc gcaaactcag ccattacttc agcgacgttg
    14041 gcttttatca ggcggcgatc ccgacctatt acggcggtat catgactttt gcatgggcga
    14101 cagataacga cgccttacgc catctctcaa ccgaaattat tcaggcgcgt tttctcgctt
    14161 ctggcctgaa atgccgttat tacaatccgg caatccatac ggcagctttt gccttacctc
    14221 agtatctgca agatgcactg gcttcacagc cgtcctaagg agaagataag aaattgaaaa
    14281 aactgaaact gcatggcttt aataatctga ccaaaagtct gagtttttgt atttacgata
    14341 tctgctacgc caaaactgcc gaagagcgcg acggttatat tgcttatatc gatgaactct
    14401 ataatgccaa ccgtctgacc gaaatcctgt cagaaacctg ttccattatc ggggccaata
    14461 ttcttaacat cgcccgccag gattacgaac cacagggtgc cagcgtcact attctggtga
    14521 gtgaagaacc ggttgacccg aaactcatcg acaaaacaga acaccccggc ccactgccag
    14581 aaacggtcgt tgcccatctc gataaaagtc atatttgcgt acatacctac ccggaaagcc
    14641 atcctgaagg tggtttatgt accttccgcg ccgatattga agtctctacc tgcggcgtga
    14701 tttctccgct gaaggcgctg aattacctga tccaccagct tgagtccgat atcgtaacca
    14761 ttgattatcg cgtgcgcggt tttacccgcg acattaacgg tatgaagcac tttatcgacc
    14821 atgagattaa ttcgattcag aactttatgt ctgacgatat gaaggcgctg tatgacatgg
    14881 tggatgtaaa cgtctatcag gaaaatatct tccataccaa gatgttgctt aaagagttcg
    14941 accttaagca ctacatgttc cacaccaaac cggaagattt aaccgacagc gagcgccagg
    15001 aaattaccgc tgcgctgtgg aaagaaatgc gcgagattta ttacgggcgc aatatgccag
    15061 ctgtttaacg gctctggcgg agctccaggc tccgccagat ttatttactt ctgctgcacg
    15121 aaattgcggt aagccgccac gacctgcaga aaatcctcaa cgccgcatag cgacaggctt
    15181 tcttcgtcgt agtagttcat cccctcttcc atttcatcgc cagcgaattc cagttgattg
    15241 gcgcgaacca tcacctcttc accgtccatc cacagggtgt attcatgccc tgcccgttgc
    15301 caggaccgtt cgctaccttt cagtgcgtgc gctgcttgtt ccacttcatc aagcaaggcc
    15361 aggttttctt tcacctcttc attaaaccag tgcccgacca cttcatgccc catggacata
    15421 cgcaccttta ccactccggt aatatcgcgc agaaattcgt aatccatagt gtgttcctct
    15481 gctcccggca atgcgccgaa atcgcattgc gccattgatg taattatcgc agccttaccg
    15541 gagaaaaaca gcggaacggc gatggtttag aaataaaaaa tgcccgggaa tctcattcac
    15601 cgggcattgt gtcgtttatg cgcagcgcgt gcgcttactt attacaccgc agtctggaaa
    15661 atcaccccat cggctttttc ggtgtactga gaaagttggt tgaagttcag ataacgataa
    15721 gtatcaacgg cagttttatc tacttgcgca acgtaggtct ggtactcttc cggcgtcggc
    15781 agtttgccaa tcagcgccgc aacagccgcc agttctgcag aagccaggaa gacattcgcg
    15841 ccagtcccca gacggttcgg gaagttacgg gtagaggtgg aaaccaccgt cgcaccgtct
    15901 gctacacgcg cctggttacc catacacaga gaacagcccg ggatctcgat acgagccccg
    15961 ctcttaccga agacgctgta gtagccttct tcagtcaact gtgcggcgtc catacgggtt
    16021 ggcggtgcca cccacaggcg ggtcggcaac tggcctttat gcgcatccag cagtttaccc
    16081 gcagcacgga agtgaccgat gttagtcatg caagaaccga taaatacttc gtcgatcttc
    16141 tcgccctgta ccgcagacag cggacgcgcg tcatccgggt cgttcggagc acacaggatt
    16201 ggctctttaa tatccgccag atcgatgtca atcactgccg cgtattccgc atctgcatcg
    16261 gcttccagca gctcaggatt cgccagccat ttttccatgc cctgaatacg acgttccagg
    16321 gtacgacgat cgccgtaacc ttccgcgatc atccacttca gcaggacgat attagagtta
    16381 aggtattcga tgattggttc tttgttcagc ttgatagtac aaccagcggc agaacgctca
    16441 gcggacgcat cggtaagctc aaaggcctgc tcaactttca gatccggcag accttcaatt
    16501 tccagaatgc ggccagagaa gatgtttttc ttgcctttct tctcaacggt cagcagacct
    16561 tgtttgatgg catacagcgg aatggcgtgt accagatcgc gcagggtgat gcccggctgc
    16621 attttgcctt tgaagcgcac cagaacggat tccggcatat ccagcggcat tacgcctgtt
    16681 gcggctgcaa atgccaccag accagaaccc gccgggaaag agataccgat cgggaaacgg
    16741 gtatgggagt cacctccggt accgacggta tccggcagca gcatacggtt cagccaggag
    16801 tggattacgc cgtcacccgg acgcagcgac acaccgccac ggttcataat gaagtccggc
    16861 agcgtgtggt gcgtgttcac gtcaactggc ttcggatacg ccgcggtgtg gcagaaagac
    16921 tgcatcacca ggtcagccga gaagcccagg cacgccaggt ctttcagttc atcacgggtc
    16981 atcgggccgg tagtgtcctg tgaacctaca gaagtcattt tcggttcgca gtacgcgccc
    17041 ggacgaatgc ctttcacgcc acaggcacgg cctaccattt tctgcgccag cgagaagccg
    17101 cgatcgctct cagcgacatc tttcgcctga cggaacacat cactgtgcgg cagaccaagt
    17161 gcttcacgcg ctttggtggt caggccacgc ccgataatca gcgggatacg gccgccagca
    17221 cgcacttcat caatcagcac gtcggttttc agttcgaagg tcgccagcag ttcgcctgtt
    17281 tcgtggttac gcacttcacc tttgtacggg taaacgtcaa tcacgtcgcc catgttcagg
    17341 ttagagacgt cgacttcgat tggcagtgca cccgcgtctt ccatcgtgtt aaagaagatg
    17401 ggtgcaattt taccgccgag gcacaaacca ccgccgcgtt tgttcggcac atgtggaata
    17461 tcatcgccca taaaccacag aacggagttc gtggcggatt tacgcgatga acccgtaccc
    17521 acaacgtcac cgacgtacgc cagcgggaaa cctttctgtt gcagagcttc aatctgtttg
    17581 atcgggccaa caacacctag ctggtctggc tcaatacctt cacgggcgtt tttcagcatc
    17641 gccagcgcgt gcagtgggat atccgggcgc gaccacgcat ccggtgccgg agaaaggtca
    17701 tcggtgttgg tttcgccagt gactttgaag acggtaacgg tcagtttttc agccagcgcc
    17761 gggcgattca taaaccattc ggcatccgcc caggactgca ttacctgctt cgcatattcg
    17821 ttgcctgctt tcgctttctc ttctacgtca tagaagttat cgaacatcag cagtgtgtga
    17881 gaaagtgctt tggcagcgat cggtgccagt ttggcatcat ccagcgcgtc gatcagcgga
    17941 tgaatgttgt aaccaccctg catggtgccc agcagttcga tggctttttc cggagtcagc
    18001 agaggggatt tggcttcgcc tttcgcgata gcagccagta agcctgcttt gacataggcg
    18061 gcttcatcga cgccaggggg aacacggttg gttaacagat ctaacaggaa ttcttcttcg
    18121 cccgcgggcg ggtttttcag cagctctaca agtgcggcca tttggtttgc atccaggggt
    18181 ttgggcgcaa tcccctcagc ggcacgctca gctacgtgct tacggtattc ttctagcacg
    18241 acggttctcc tcgctctcat tgtcatagtg cggcaggcga ttctcttcac gctcctgtga
    18301 gacagcagtt tgtagggtaa atgcccagta ccgcaacggg cagaatagca ggattttgac
    18361 gacgtgttaa tctgtttaca aaaaagcaac ataaaaaagt ggctgaatcg ttaaggatgg
    18421 tctagagatt gtttccctcc gtaaaaactt cgttaattcg catggtgata atcacctttc
    18481 tcaacgaatc ccaagattag tcaaaattta aactaccgcc tctttatact cggattaaca
    18541 gcacctgcgg gtgacagttc gccgaccatt gcgatttcct tgagatccga attatgaaaa
    18601 tgactttgcc gtttaaaccc catgtgctgg cactaatttg cagtgccggg ctttgtgccg
    18661 cctctgccgg gctatatata aaaagccgca cagtggaagc ggctgtggaa acgcaatcga
    18721 cacaactggc tgtgtctgac gctgccgcgg ttacgcttcc tgcaacggtt tccgcgcctc
    18781 ccgtaacacc cgccgtcgtt aaatccgcat tcagcactgc acaaatagat caatgggtcg
    18841 cgcccgtcgc gctgtatccc gacgccctac tttcgcaggt gctgatggca tcaacctatc
    18901 cggcaaacgt tgctcaagca gtgcaatggt cgcacgataa tccacttaaa caaggcgatg
    18961 ctgctattca ggcggtatct gaccagccgt gggacgccag cgttaaatca ctggtggcct
    19021 ttccacaatt gatggcattg atgggcgaaa acccgcaatg ggtgcaaaac ctgggcgatg
    19081 cttttctggc gcagccgcag gacgtgatgg actcggtaca gcgattgcgg caactggcgc
    19141 aacaaaccgg ttcgctgaag tcatcaaacg aacaaaaagt tattaccaca acgaagaaag
    19201 ctgtaccggt aaaacagaca gtcacggcac ccgtcatacc atccaatacc gttttaactg
    19261 ccagccccgt cattacagag cctgcaacaa ccgtcatttc cattgagccc gccaatcctg
    19321 atgtggtcta tattcccaac tacaacccaa ccgtggttta cgggaactgg gccaatactg
    19381 cgtatccgcc ggtttatctg ccaccaccag ccggagaacc gtttattgac agctttgtgc
    19441 gcggattcgg ctatagcatg ggtgttgcta ccacgtacgc actattcagc agcatcgact
    19501 gggatgacga cgatcatgac catcatcatc atgacgatga tgattatcat caccacgatg
    19561 gcggtcatcg tgacggtaat ggctggcaac acaacggcga caacatcaat atcgacgtca
    19621 acaatttcaa ccgtatcacc ggtgagcatc ttactgataa gaatatggca tggcggcaca
    19681 atccaaacta ccgtaatggt gtgccctatc atgatcagga tatggcaaag cggtttcatc
    19741 aaaccgatgt caacggcgga atgagtgcca cgcagctacc tgctccaaca cgcgacagcc
    19801 agcgtcaggc ggcagcaagt cagtttcagc aacgaacaca cgccgccccc gtcattacac
    19861 gagataccca acgtcaggca gcggcacagc ggtttaatga agctgaacac tatgggagct
    19921 atgacgactt ccgcgacttc agccgtcgcc aacccctgac ccagcaacaa aaggacgccg
    19981 ctcgtcagcg ttatcagtca gcttctcctg agcagcgcca ggcagttcgc gagagaatgc
    20041 agactaaccc gcagatccag cagcgaagag aggcagcgcg tgagcgcatt cagcccgcct
    20101 cgcctgagca gcgccaggca gtccgcgaga aaatgcagac taacccacag atccagcagc
    20161 gaagagacgc agcgcgtgag cgtattcagt cagcctcgcc tgagcagcgc caggtgttta
    20221 aggaaaaagt acagcagcgc ccactgaacc aacagcaacg tgataacgcc cgccagcgtg
    20281 ttcaatcagc atcacctgaa caacgtcagg tttttcggga gagagttcag gagagccgcc
    20341 cacaacgtct aaacgacagt aaccgtactg ccagattgaa taacgatcaa cggtcagcag
    20401 tacgcgaacg tctctctgag cgcggagcaa ggcgactgga aaggtaaatt acagacgtaa
    20461 aaaaagcggc gtggttagcc gcttttttaa ttgccggatg ttccggcaaa cgaaaaatta
    20521 cttcttcttc gctttcgggt tcggcaggtc ggtaatgcta ccttcgaaca cttctgccgc
    20581 caggcccaca gactcgtgca gagtcgggtg cgcatggatg gtcagcgcga tgtcttcagc
    20641 gtcacaaccc atttcgattg ccaggccgat ttcacccagc agctcgccgc cgttggtacc
    20701 gacaatcgca ccaccgatca cacggtgaga ttctttgtcg aaaatcagct tggtcatacc
    20761 gtctgcgcag tcggaagcga tagcacgacc agaagcagcc cacgggaagg tggcggtttc
    20821 atagctgatg cctttctctt tcgcttcttt ctcagtcaga cctacccatg caacttctgg
    20881 ttcggtatag gcgatagacg ggataacttt cggatcgaag tagtgttttt taccggcgat
    20941 aacttcagcg gcaacgtgac cttcgtgaac acctttgtgt gccagcatcg gctgaccaac
    21001 gatatcgccg atagcaaaga tgtgcggtac gttggtacgc agctgtttgt caacgcggat
    21061 gaaaccacgg tcgtccactt ccacgccagc tttgcctgcg tcgaggtttt taccgttcgg
    21121 cacacgacca atcgctacca gcacggcgtc gtaacgctgc ggttcagcgg gtgctttttt
    21181 gccttccatc gtcacataaa taccgtcttc tttcgcttca acggcggtaa ctttggtttc
    21241 cagcatcagg ttgaatttct tgctgatacg cttggtgaag actttaacga tgtctttgtc
    21301 agctgccggg ataacctggt cgaacatttc aaccacgtca atctgtgaac ccagcgcgtg
    21361 gtatacggtg cccatttcca gaccgatgat accgccaccc attaccagca ggcgttctgg
    21421 tacttctttc agttccagcg cgtcagtgga gtcccagata cgcggatctt catgcggaat
    21481 aaacggcagt tggatcgggc gagaacccgc tgcaatgatc gcgttgtcga agttgatcac
    21541 ggttttaccg ttctcacctt caacttccag ggtgttagcc ccggtaaatt tacccagacc
    21601 gttgaccact ttgactttgc ggcctttcgc cataccagcc agaccaccgg tcagctgatt
    21661 gatcactttc tctttccagg tacgaatctt gtcaatatcg gttttcggtt cgccgaagac
    21721 gataccgtgt tcagccagcg ctttggcttc ttcgataact tttgctacgt gcagcagtgc
    21781 tttagaaggg atacagccga cgttcaggca aacaccgcca agggtgttgt aacgttctac
    21841 gattacggtt tccagaccta aatcagcgca acggaaggca gcggagtaac ctgcggggcc
    21901 tgccccaagt accacgacct gagttttgat ttcagtactc atcatgacct ctatatattt
    21961 atctccggcg gtcatacccg tcgtctttca ggccgcagcg gcgttagctt cacgccctca
    22021 ccccagtcac ttacttatgt aagcccctgg ggattctggc gcttgctacc ttgctgcacc
    22081 cagaaatcca tagggtatgt gaagtaatac cctaaccacc accgggtcgt tctatccgtc
    22141 ggtattttac aaaattgtta acaattttta aacaacaaac ggcaaccgat ttgtctattc
    22201 gctaataacc tcaatacatt catgagatta ccagaaaaaa gccggccgtt gggccggctc
    22261 ttttacttac atcaccagac ggcgaatgtc agacagcgtg ttgttaatga tggtaatgaa
    22321 acgggcacca tcagcaccgt cgatcacgcg gtggtcgaag gagagagaaa tcggcagcat
    22381 cagacgcggc acgaactctt taccattcca caccggctcc atcgcggact tggaaacgcc
    22441 gaggatagcc acttccggcg cgttcacaat cggcgcgaag tgggtagtac ccaggccgcc
    22501 gatgctggag atggtgaagc aaccgccctg catttcgccc gcagtcagct taccgtcacg
    22561 cgctttctta gaaatagtca tcagctcgcg agacagctcg atgatgcctt tcttgttgac
    22621 gtctttgaat accggaacaa ccagaccgtt cggggtatcc accgccacac cgatgttgat
    22681 gtatttcttc agggtcagac gctgaccgtc ttccgacagc gaactattga agcgaggcat
    22741 ctgctcaaga gctgcagcaa cggctttcat gatgaagaca accggggtga tcttcacatc
    22801 cagcttacgt ttcgccgctt cttcgttctg ctgtttacgg aacgcttcca gctcggtgat
    22861 atcggttttg tcgaagtggg taacatgcgg gatcatcacc cagttacggc tcaggttagc
    22921 accagaaatt ttctggatac ggcccagttc cacttcttcg atttcaccaa acttgctgaa
    22981 gtccaccttc ggccacggca gcatgcctgg gataccgccg ccagtcgccg ccggagctgc
    23041 ttctgcacgt ttgatagctt ctttcacgta agcctgaacg tcttcgcgca ggatacgacc
    23101 tttacggcca gtgcccttca ctttcgccag gttaacacca aactcgcgtg ccagacggcg
    23161 gatcagcgga gtcgcgtgaa cataagcgtc gttttcagca aattcagatt tgccttccgc
    23221 tttcgcagct ggtgctgctg ccggggcttc agcttttgct gccggtgccg gcgctgccgc
    23281 ttcctgtttc gcaggagctg ccgcaggcgc tgcgccttca acttcgaaga tcataatcag
    23341 cgagccagtt ttcactttat cgccaacgtt gactttcagt tccttcacga cgcctgcaaa
    23401 cggcgccgga acttccatag aagctttgtc gccttctacg gtgatcagtg actgttcagc
    23461 ggcaactttg tcgcccactt tcaccatcac ttcagtcact tcaacttcgt caccgccgat
    23521 atccggaacg ttaacttctt tcacgccagc tgctggtgca ggggccgctg ccggagccgc
    23581 ttcctgttta gccgccggag ctgccgcgcc tgcttcaccc gcgacttcga agaccataat
    23641 cagcgagccg gtagacactt tgtcacccac gttcactttg atctctttca cggtgccagc
    23701 aaacggagcc ggaacttcca tagaagcttt atcgccttct acggtgatca gcgactgttc
    23761 agcttcaact ttatcgccaa ctttcaccag gatttcggtc acttcaactt cgtcgctgcc
    23821 gatatccgga acgttaacgt cttttgccgc cgcagccgcg ggtgctgctg ccggagctgc
    23881 ttctttcttc tcttctgcct gagcaggtgc agcgtctgct gcaccgtcgg cggaatcgaa
    23941 aatcataatc agtgcgccgg tctgggtttt atcgccaaca gagactttga tctctttaac
    24001 gatacccgcc tgcggagacg gaacttccat agaggctttg tcgccttcta cggtgatcag
    24061 cgactgttcg gcttcaactt tgtcgcccac tttgaccagg atctcggtga tttcaacttc
    24121 atcagccccg atgtccggta ctttgatttc gatagccatt attcttttac ctcttacgcc
    24181 agacgcgggt taactttatc tgcatcgatg ttgaatttgg cgattgcgtc agcaaccact
    24241 ttcttatcga tttcgccacg tttagccagt tcgcccagcg ccgcaaccac gacataagaa
    24301 gcatcaactt cgaagtggtg acgcaggttc tcacggctgt cggaacgacc gaagccatca
    24361 gtacccagta cgcggtagtc gtcagccggt acgtaagtac ggacctgctc agcgaacagt
    24421 ttcatatagt cggtagatgc cactgccgga gcgtcgttca tcacctgagc gatatacgga
    24481 acgcgcggag tttccagcgg atgaagcatg ttccagcgtt cacaatcctg accatcacgc
    24541 gccagctcgg tgaaggaggt cacgctataa acgtcagaac ctacgccgta atctttcgcc
    24601 aggatctctg ccgcttcacg gacgtgacgc aggatagaac cggagcccag cagctgaact
    24661 ttacctttgc taccttcaat ggtttcgagt ttgtagatac ctttacggat accttcctca
    24721 gcaccttccg gcattgccgg catgtggtag ttttcgttca gcgtggtgat gtagtagtaa
    24781 acgttctctt gtttttcacc gtacatacgc tccagaccgt catgcataat gacagcaact
    24841 tcgtaagcgt aagccgggtc gtaagagata cagttcggaa tagtcagcga ctgaatgtgg
    24901 ctgtgaccat cttcatgctg cagaccttct ccgttcaggg tggtacgacc ggaagtaccg
    24961 ccgatcagga agccacgcgc ttgctggtcg ccagccgccc agcacagatc gccaatacgc
    25021 tggaagccga acatcgagta atagatgtag aacgggatca tcggcagatt gttggtgctg
    25081 taagaggtcg ccgctgccag ccaggaacaa cctgcgccca gctcgttgat cccttcctgc
    25141 agaatctgac ctttctcgtc ttctttatag taagcaacct gctcgcggtc ctgcggggtg
    25201 tactgctgac cgttcgggct gtaaatacca atctgacgga acagaccttc cataccgaaa
    25261 gtacgcgctt cgtcggcgat gatcggtacc agacgatctt tgatcgactt gttcttcagc
    25321 attacgttca gggcacgaac gaaagcgata gtggtagaga tctctttgct ctgctcttcc
    25381 agcagcgcgc cgaagtcttg caggctcggc agctcaagct tctcggtgaa gttcggctga
    25441 cggcttggca gataaccgtg cagtttctga cgctgtgcgt gcagataggt atgctcttca
    25501 gaaccttccg ggaaggtgat gtacggcagt ttttcgatat ctgcatcaga caccggcaca
    25561 ttgaaacggt cgcggatgtg acgcacgccg tccatgttca ttttcttaac ctggtgcgcg
    25621 atgtttttac cttcagccgc gtcgcccatg ccgtaacctt taatggaatg agcaaggatt
    25681 actgtcgctt tgcctttggt ttcctgcgct ttcttgaatg cagcgtagat tttcttcgga
    25741 tcgtgaccac cacggttcag tgcccagatc tgctcgtcag tccagtctgc aaccagtgct
    25801 gcggtttcag gatatttacc gaagaagtgt tcacgaacgt acgcaccatc tttcgatttg
    25861 aaggtctggt agtcgccgtc aacggtttcg ttcatcagct ggatcagttt accgctggta
    25921 tctttacgca gcagttcatc ccaacggcta ccccacatca ctttgatcac gttccagcca
    25981 gcaccttcga agatgccttc cagttcgttg atgatcttgc cgttaccggt gaccgggccg
    26041 tcaagacgct gcaggttaca gttgataacg aagaccaggt tatccagttt ttcacgggta
    26101 gcgatggtga tcgcaccttt ggattccggt tcgtccattt caccgtcgcc gaggaacgcg
    26161 taaacggtct gtttagaggt atctttcagg ccacggtgtt ccagatattt caggaattta
    26221 gcctggtaaa tagcaccaat cggccccagc cccatagata cggtcgggaa ctgccagaat
    26281 tccggcatca gtttcgggtg cggataggaa gagaggccat tgccgtgaac ttcctgacgg
    26341 aagttatcca gctgctcctg agtcagacga ccttccagga aagcacgagc gtacacgccc
    26401 ggggagatgt ggccctggaa gtaaaccagg tcgccgccat cctgctcgtt gcgtgcacgg
    26461 aagaagtggt taaagcacac atcataaatg gttgcggaag actggaagga cgccatatgg
    26521 ccgcccagtt cgaggtcttt tttcgacgca cgcagcaccg tcatgatggc gttccagcgg
    26581 atagctgaac gaatacggcg ttccagttcc agattacccg gatactccgg ttgttcttca
    26641 acggggatgg tgttgatgta gttgctgata cctgtgcctg cggctacgtt tacaccgcct
    26701 ttgcgggctt cagcaagcag ttggtcgatc agatactgag cacgctcaac accttcttca
    26761 cggatgaccg attcgatcgc ctggagccag tcgcgagttt cgatcggatc cacgtcattt
    26821 gggaaacgtt ctgacatggg ttattcctta tctatctaat aacgttgagt tttctggaac
    26881 ctgtcccatt gaactctcgc cggaaagctc aataagacag gttctacgtt tagttgccgc
    26941 gcttttatat gcgcttgatt tacaacatct tctggataat ttttaccagt aaaatcacta
    27001 attctttcgt tgctccagac gacgcagaga acgctcacgg cggctctctt cacgacttct
    27061 gtcgagcaaa atttcttcga taaaggccag atggcgatgc gatgcttcgc gcgcttcttc
    27121 cggcttaccg gccataatcg cttcaaatat gcgggtgcgg tgactactca ccagcggcag
    27181 catctcgcga cgcgaataga gcaattcgaa gttctggcgg acattctggg ccaacatcgg
    27241 ctccatacac cttagcagat gaagcagaac cacattgtgg gccgcttcag tgacagcaat
    27301 ctgatactgg agtacggcgt ttgattccgc gtccagatcg ccagactgct gcgccagttc
    27361 tatggcgtga tggagttcac ggatgcgttc cttgtcttca tcggtactac gcagcgcggc
    27421 gtaataagcg gcgatacctt ccagggcgtg tcgtgtttcg agcaagtcat actgtgactc
    27481 aggatggtcg gagagcagct ccaccagcgg atcgctgaag ctttgccata ggctgctctg
    27541 gacaaaagtg ccgccaccct ggcgacgaag caacaagccc ttcgcttcga gacgttgaat
    27601 cgcctcacgc aaggagggac gggagacgtc aaactgtttt gccagttcgc gttccggtgg
    27661 gagtttttcg cccgggcgga gagtgccttc gaggatcaaa aactccagtt gctgctcaat
    27721 cacatcggag agttttggtt ggcggatttt gctgtaggcc atgagttcct gtcttaagcc
    27781 acttgccgaa gtcaattggt cttaccaatt tcatgtctgt gacgctaaag taacaaagta
    27841 ttcaccttat gtccatacag gttttgattg aaatcatgaa actgtgcaca ttttaacaac
    27901 ttgacatata taacgtttca aagttgtaac tatgcacaaa tgtagacttt acgtaggaaa
    27961 gggatttttt aacgattatt aaactataaa aatccgaatt gaaccgattc acttaccaat
    28021 tttgtgattt ttaattcaat taaaacgaat ttaaattcat tctacatatt gagaggggtt
    28081 gaggctgagc tttacaaacg gtttcttttt aagcaactca tcttcaacca tgcataaagc
    28141 gggtgcattc gctgccgcat accattattc ttgatctgac ggaagtcttt ttgtaacaat
    28201 tcaaacttct ttgatgtaaa caaattaata caacaaacgg aattgcaaac ttacacacgc
    28261 atcactgcgt agatcaaaaa aacaaccacc gcacgaggtt tcatgatgga aggtcaacag
    28321 cacggcgagc agctaaagcg cggccttaaa aaccgccata ttcagcttat cgcgctgggt
    28381 ggcgcgatag ggaccgggtt attcctgggt agcgcctccg taatacagtc cgcagggcca
    28441 gggattatcc tgggttacgc cattgctggt tttatcgcct ttctgatcat gcgtcagctg
    28501 ggtgaaatgg tggtcgaaga acctgtcgca ggctccttta gccactttgc ttataaatac
    28561 tggggcagtt ttgccggttt cgcctctggc tggaactact gggtactgta cgttttagtt
    28621 gccatggctg agctgactgc cgtgggtaaa tacattcagt tctggtatcc ggaaatcccc
    28681 acctgggttt ctgccgccgt attctttgtg gtgattaacg ccatcaacct gaccaacgtt
    28741 aaagtgtttg gcgagatgga gttctggttt gccattatca aagttatcgc tgtggtagcg
    28801 atgatcatct tcggcggctg gctgctattc agtggcaaca gcggcccgca ggcgaccgtt
    28861 agcaacctgt gggatcaggg tggtttcctg ccgcacggct tcaccgggct ggtgatgatg
    28921 atggcgatta tcatgttctc gttcggtggt ctggaactgg tggggatcac cgcagcagaa
    28981 gctgataacc cggagcaaag tataccgaaa gcaactaacc aggttatcta ccgcatcctg
    29041 attttctata ttggttcgtt agccgttctg ctctcactga tgccgtggac ccgcgttacc
    29101 gccgatacca gtccgtttgt gctgatcttc cacgagttag gcgatacctt tgtggcgaat
    29161 gcgctgaaca tcgtggtact gactgcggcg ctctccgtgt acaacagctg cgtatattgc
    29221 aacagccgta tgctgtttgg tctggcacaa cagggtaatg cgccaaaagc gctggcgtct
    29281 gtcgataaac gtggtgtacc agtaaatacc attctggtgt ctgcactggt aacggcgttg
    29341 tgcgtactga ttaactacct tgccccagag tccgctttcg gactgttaat ggcgctggtg
    29401 gtatctgcac tggtaatcaa ctgggcgatg attagcctgg cgcatatgaa attccgtcgc
    29461 gccaagcagg aacaaggcgt ggtaactcgc ttccctgctc tgctttatcc gctgggtaac
    29521 tggatctgcc tgctgtttat ggcggcggta ctggtgatta tgctgatgac cccaggaatg
    29581 gcgatttcgg tatacctgat cccggtatgg ctgatcgtgt taggtatcgg ctatctgttt
    29641 aaagagaaaa ccgccaaagc cgtaaaagcg cattaatctc tctacgccct cacccgtaca
    29701 gggtgagggc aataatcttt acaccaacgc cccgtaaatc gtcagtagtg caatcaccac
    29761 cacgaccacg aacgaggttt tcttcgccat tgaaaccgct gccttcggcg tctccacctt
    29821 atcgacatgc ggttcacgcg ccagagagaa ctgcgccaga cgcgttaaca cctgatactg
    29881 cgaagtatgg aagtcaccca gcgaagcaaa ccaggccggt aacgctttct ccccatgacc
    29941 gatcaaggca tataccacac ccgcaagacg aaccggcacc caatccagta catgaagcac
    30001 ggcatcaatg ccggactgta aacgatgatg cggcgtctgg tatcgcgcca gccagtattg
    30061 ccatgcacgc aaaaacgcat accccatcag cgtaacgggt ccccagattc cccccacaat
    30121 caaccagaac agcggagcaa gataaaaacg aaagttaatc cacagcaatg cattttgcag
    30181 ctcacgcaaa tactcacgtt catcgcagcc tgccgggacg ccgtgaatca tggtgagttc
    30241 gccagccatc gtgacacggg catggctatc attacgtgaa gcagctgtca gataagcatg
    30301 ataatgaaga cgaactttac ctgcgccaat acacagcaaa ccaatcagca gccacaccag
    30361 cagcgtggga acgttgaaca atactccctg caatgcgcgt aacagtaaaa aagtcacgcc
    30421 catcgcaata atggtcatgc ctaacgtgcg cccgagagaa aaatgtttca cccgccgaaa
    30481 gaacgcttca agacgatgat caagctgcca gtgctcgccc aacttaaaca ggcgctcgaa
    30541 aattaacacc agtaaggttg taaatagcgt catgttgtct ccttgctgac cagcgcacga
    30601 aaccgcgccc aatcaaatgc agggccggga tcggttttcc gatccggcgc aatatcacaa
    30661 tggcccgtca tgttattagc gatatctgga tagcgatcaa tcagtgcccg cgtaaccgcc
    30721 gcaagctgtt gatactgcgc atcggtatac gccagcgtat cggtgccttc aagctcaatc
    30781 ccaatagaaa aatcattgca gcgttcgcgc ccctgatact gagagactcc cgcatgccat
    30841 gcacgtttat cgaaaggaac atactggact atttcaccat cacggcgaat caaacagtga
    30901 gcggagacgc gcaaatgggc gatctcagca aagaaaggat gtgcctgcgg atcaatagtt
    30961 ccagtgaata atgcgtcgat ccacggaccg ccaaactcgc ctggcggcag gctaatattg
    31021 tgcaccacca gcagggtggg tgtttcgtca tccgggcggc aatcgtaatg tggtgaggga
    31081 acgcggcgcg cgccaaccag ccacccctgt tctaacaaca tgcaggatct ccttatatgt
    31141 ggtgctaata cccggttcag agtagcatgt ttctacctta tgattcgtta gctatctgga
    31201 gttttaacat gccgcctcgc cgctataacc ctgacacccg acgtgacgag ctgctggaac
    31261 gcattaatct cgatatcccc ggcgcggtgg cccaggcgct gcgggaagat ttaggcggaa
    31321 cagtcgatgc caacaatgac attacggcaa aacttttacc ggaaaactct cgctctcatg
    31381 ccacggtgat cacccgcgag aatggcgtat tttgcggcaa acgctgggtt gaagaggtgt
    31441 ttattcaact ggcaggcgac gatgtcacca taatctggca tgtggatgac ggcgatgtca
    31501 tcaacgccaa tcaacccttg ttcgaacttg aaggcccatc ccgcgtgctg ttaacgggcg
    31561 aacgcactgc gcttaatttt gtgcaaaccc tttcaggagt tgccagtaag gtacgccact
    31621 atgtcgaatt actggaaggc accaacacgc agttgttgga tacgcgcaaa accttacctg
    31681 gcctgcgttc agctctgaaa tacgcggtac tttgcggcgg cggagcgaat caccgtctgg
    31741 ggctttctga tgccttcctg atcaaagaaa atcatattat tgcctccggc tcagtgcgcc
    31801 aggccgtcga aaaagcgtcc tggctgcacc cggatgcgcc agtagaagtc gaagtagaga
    31861 atctggaaga acttgatgaa gccctgaaag caggagccga tatcatcatg ctggataact
    31921 tcgaaacaga acagatgcgc gaagccgtca aacgcaccaa cggcaaggcg ctactggaag
    31981 tgtctggcaa cgtcactgac aaaacactgc gcgaatttgc cgaaacgggc gtggacttta
    32041 tctccgtcgg tgcgctaact aaacacgtac aagcactcga cctttcaatg cgttttcgct
    32101 aattgctgac agatttatcc gctccatcgc gggcggataa tctccccttc cccaactttc
    32161 ttcgtaacgc ctcgcaaatt tcttgtcttt cgctgcaacg aaataaaaaa cctcggaagc
    32221 tgctttcccg tttcgttttt tgcccctcgc ttgtgctgat ggcgtttgcc aaagtagcgc
    32281 caaccaaatc aaggagcgaa acagatggac aagcaacgcg gttttacact tatcgaactg
    32341 atggtggtta ttggcatcat tgccatttta agcgccattg gtattcccgc ttatcaaaac
    32401 tacctgcgca aagctgcact caccgacatg ctacaaacct ttgtgcctta ccgtaccgcc
    32461 gtagagttgt gcgcgctgga acatggtg
//
LOCUS       DADMIB010000030        31435 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.030, whole genome shotgun sequence.
ACCESSION   DADMIB010000030 DADMIB010000000
VERSION     DADMIB010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 31435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31435
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.030"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(80..3361)
                     /locus_tag="JNZ89_001325"
     CDS             complement(80..3361)
                     /locus_tag="JNZ89_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5107 domain-containing protein"
                     /protein_id="HAY8935254.1"
                     /translation="MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYG
                     VTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPA
                     LVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMT
                     GFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKR
                     AVSAFPIATGTYYKVDYSAGVDISCYKNVPVTTSYMAEKSQYDFVGAWCHDEDGGLLH
                     VANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEE
                     KRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLVIREIGKCN
                     ALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQELPLLDVAKA
                     PLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNR
                     ADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGN
                     SKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARV
                     QREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTL
                     AAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESI
                     EECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELA
                     ARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLN
                     LWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDAREPQQASELL
                     HAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEAMRCLRLAATGDRTINIHS
                     YYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLL
                     SLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFI
                     FNYVH"
     gene            3479..4672
                     /locus_tag="JNZ89_001326"
     CDS             3479..4672
                     /locus_tag="JNZ89_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HAY8935255.1"
                     /translation="MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAV
                     SNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACL
                     SPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
                     MPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIG
                     SSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLK
                     SQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWL
                     YGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEA
                     QLRQI"
     gene            complement(4736..5989)
                     /locus_tag="JNZ89_001327"
     CDS             complement(4736..5989)
                     /locus_tag="JNZ89_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HAY8935256.1"
                     /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
                     FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK
                     QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP
                     HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL
                     KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD
                     AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS
                     INDEAVIERIKGKVLDICARYPVYA"
     gene            6317..7507
                     /gene="hmpA"
                     /locus_tag="JNZ89_001328"
     CDS             6317..7507
                     /gene="hmpA"
                     /locus_tag="JNZ89_001328"
                     /EC_number="1.14.12.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NO-inducible flavohemoprotein"
                     /protein_id="HAY8935257.1"
                     /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
                     MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL
                     LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK
                     TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR
                     IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISSGVGQTPMLA
                     MLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK
                     GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIYYECFGP
                     HKVL"
     gene            complement(7552..7890)
                     /gene="glnB"
                     /locus_tag="JNZ89_001329"
     CDS             complement(7552..7890)
                     /gene="glnB"
                     /locus_tag="JNZ89_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HAY8935258.1"
                     /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
                     LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
                     RTGEEDDAAI"
     gene            complement(7951..9285)
                     /gene="glrR"
                     /locus_tag="JNZ89_001330"
     CDS             complement(7951..9285)
                     /gene="glrR"
                     /locus_tag="JNZ89_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator GlrR"
                     /protein_id="HAY8935259.1"
                     /translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRV
                     LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS
                     FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV
                     LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS
                     NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT
                     HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR
                     AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV
                     EARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
     gene            complement(9275..9988)
                     /gene="qseG"
                     /locus_tag="JNZ89_001331"
     CDS             complement(9275..9988)
                     /gene="qseG"
                     /locus_tag="JNZ89_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system QseEF-associated
                     lipoprotein QseG"
                     /protein_id="HAY8935260.1"
                     /translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP
                     VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGCWQ
                     NTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEER
                     QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT
                     PHESEKPAPSTHEVTPDEP"
     gene            complement(10153..11580)
                     /gene="qseE"
                     /locus_tag="JNZ89_001332"
     CDS             complement(10153..11580)
                     /gene="qseE"
                     /locus_tag="JNZ89_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417051.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor histidine kinase
                     QseE/GlrK"
                     /protein_id="HAY8935261.1"
                     /translation="MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA
                     ALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHA
                     GVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSR
                     GQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLG
                     NSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA
                     DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETV
                     VSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSS
                     HGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGAVKGSGLGLSIARDCIRRMQG
                     ELYLVDESGQDVCFRIELPSSKNTK"
     gene            complement(12138..16025)
                     /gene="purL"
                     /locus_tag="JNZ89_001333"
                     /gene_synonym="purI"
     CDS             complement(12138..16025)
                     /gene="purL"
                     /locus_tag="JNZ89_001333"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HAY8935262.1"
                     /translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN
                     APLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
                     VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFDLDDAEQLFAHHQPTPVTS
                     VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR
                     HKIFNADWIIDGEQQPKSLFRMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHE
                     TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
                     FSVSNLRILGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTY
                     EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG
                     GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
                     SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL
                     CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
                     ALVREGITIADAVKRILHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV
                     TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
                     MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL
                     SLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD
                     VRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGINADIASLGD
                     DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT
                     VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA
                     APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHAL
                     VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE
                     LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
                     DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE
                     RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG"
     gene            16285..17841
                     /gene="mltF"
                     /locus_tag="JNZ89_001334"
     CDS             16285..17841
                     /gene="mltF"
                     /locus_tag="JNZ89_001334"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HAY8935263.1"
                     /translation="MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGE
                     LRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNA
                     DLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLCNLTAEQLTVAPGHVV
                     VNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELA
                     VALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVD
                     TRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLT
                     KNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHML
                     DARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
                     LVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLF
                     SRKGSEEKQN"
     gene            complement(17838..18374)
                     /gene="tadA"
                     /locus_tag="JNZ89_001335"
     CDS             complement(17838..18374)
                     /gene="tadA"
                     /locus_tag="JNZ89_001335"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HAY8935264.1"
                     /translation="MRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAV
                     LVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCA
                     GAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFF
                     RMRRQEIKAQKKAQSSTD"
     gene            complement(18399..19034)
                     /gene="yfhb"
                     /locus_tag="JNZ89_001336"
     CDS             complement(18399..19034)
                     /gene="yfhb"
                     /locus_tag="JNZ89_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417055.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase C"
                     /protein_id="HAY8935265.1"
                     /translation="MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
                     LPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQE
                     RLTTYLLSSDADIWLITGSPQPLVEAVYFDKPWLPRVNLIASQIQRGYGGWVLTMRCL
                     GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE"
     gene            19243..20091
                     /locus_tag="JNZ89_001337"
     CDS             19243..20091
                     /locus_tag="JNZ89_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417056.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HAY8935266.1"
                     /translation="MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEA
                     GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL
                     IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN
                     AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN
                     ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA
                     LVKKLV"
     gene            20147..20407
                     /gene="yfhL"
                     /locus_tag="JNZ89_001338"
     CDS             20147..20407
                     /gene="yfhL"
                     /locus_tag="JNZ89_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster ferredoxin YfhL"
                     /protein_id="HAY8935267.1"
                     /translation="MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH
                     YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI"
     gene            complement(20601..20681)
                     /gene="shoB"
                     /locus_tag="JNZ89_001339"
     CDS             complement(20601..20681)
                     /gene="shoB"
                     /locus_tag="JNZ89_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin ShoB"
                     /protein_id="HAY8935268.1"
                     /translation="MTDCRYLIKRVIKIIIAVLQLILLFL"
     gene            complement(21101..21481)
                     /locus_tag="JNZ89_001340"
     CDS             complement(21101..21481)
                     /locus_tag="JNZ89_001340"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HAY8935269.1"
                     /translation="MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHH
                     QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL
                     GVVNMHVTLADERHYACATVIIES"
     gene            complement(21481..22212)
                     /gene="pdxJ"
                     /locus_tag="JNZ89_001341"
     CDS             complement(21481..22212)
                     /gene="pdxJ"
                     /locus_tag="JNZ89_001341"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HAY8935270.1"
                     /translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV
                     HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT
                     TEGGLDVAGQREKMRDACKRLTDAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA
                     DAKTDAEQAQELVRIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI
                     IGRAVMTGLKDAVAEMKRLMLEARG"
     gene            complement(22224..22952)
                     /gene="recO"
                     /locus_tag="JNZ89_001342"
     CDS             complement(22224..22952)
                     /gene="recO"
                     /locus_tag="JNZ89_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HAY8935271.1"
                     /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
                     TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
                     ETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGEPVDD
                     TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG
                     GKPLKSRELFRQFMPKRTVKTHYE"
     gene            complement(22964..23869)
                     /gene="era"
                     /locus_tag="JNZ89_001343"
     CDS             complement(22964..23869)
                     /gene="era"
                     /locus_tag="JNZ89_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HAY8935272.1"
                     /translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
                     HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
                     PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL
                     NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
                     ERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
                     LWVKVKSGWADDERALRSLGYVDDL"
     gene            complement(23866..24546)
                     /gene="rnc"
                     /locus_tag="JNZ89_001344"
     CDS             complement(23866..24546)
                     /gene="rnc"
                     /locus_tag="JNZ89_001344"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003848606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HAY8935273.1"
                     /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
                     DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK
                     SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
                     QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
                     ALKKLELE"
     gene            complement(24819..25793)
                     /gene="lepB"
                     /locus_tag="JNZ89_001345"
     CDS             complement(24819..25793)
                     /gene="lepB"
                     /locus_tag="JNZ89_001345"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HAY8935274.1"
                     /translation="MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGD
                     SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI
                     LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP
                     VSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK
                     ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR
                     DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGVRLSRIGGIH"
     gene            complement(25809..27608)
                     /gene="lepA"
                     /locus_tag="JNZ89_001346"
     CDS             complement(25809..27608)
                     /gene="lepA"
                     /locus_tag="JNZ89_001346"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010434076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HAY8935275.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
                     CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR
                     KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL
                     ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA
                     VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV
                     VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG
                     RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
                     KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
     gene            complement(27806..28285)
                     /gene="rseC"
                     /locus_tag="JNZ89_001347"
     CDS             complement(27806..28285)
                     /gene="rseC"
                     /locus_tag="JNZ89_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR-reducing system protein RseC"
                     /protein_id="HAY8935276.1"
                     /translation="MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG
                     PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS
                     DVAALCGAVLGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ"
     gene            complement(28282..29238)
                     /gene="rseB"
                     /locus_tag="JNZ89_001348"
     CDS             complement(28282..29238)
                     /gene="rseB"
                     /locus_tag="JNZ89_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB"
                     /protein_id="HAY8935277.1"
                     /translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE
                     LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGDEISYFEPGLEPFTL
                     NGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
                     DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA
                     KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM
                     LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ"
     gene            complement(29238..29888)
                     /gene="rseA"
                     /locus_tag="JNZ89_001349"
     CDS             complement(29238..29888)
                     /gene="rseA"
                     /locus_tag="JNZ89_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-E factor RseA"
                     /protein_id="HAY8935278.1"
                     /translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR
                     GDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT
                     QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN
                     GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
     gene            complement(29921..30496)
                     /gene="rpoE"
                     /locus_tag="JNZ89_001350"
     CDS             complement(29921..30496)
                     /gene="rpoE"
                     /locus_tag="JNZ89_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HAY8935279.1"
                     /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
                     DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE
                     AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
                     AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
     gene            complement(30493..30648)
                     /gene="rseD"
                     /locus_tag="JNZ89_001351"
     CDS             complement(30493..30648)
                     /gene="rseD"
                     /locus_tag="JNZ89_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rpoE leader peptide RseD"
                     /protein_id="HAY8935280.1"
                     /translation="MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFG
                     LGRLYLG"
     gene            30904..>31435
                     /locus_tag="JNZ89_001352"
     CDS             30904..>31435
                     /locus_tag="JNZ89_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY8935281.1"
                     /translation="MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG
                     STFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGV
                     LFDTHVQPNGEESYHLTREGGHSHRRILHAADATGREVQSTLVSKAQNHPNIRVLERS
                     NAVDLIVSDKIGLPGTR"
BASE COUNT         7529 a         8419 c         7923 g         7564 t
ORIGIN      
        1 cacgcaagca ccttaaaatc accatcatac actaaatcag taagttggca gcattaccaa
       61 atattacagt taatagggtt tagtgaacgt agttaaaaat aaaaggcatc acagtggtga
      121 ataatgccgc tttcggccag gccggattaa tcgccgtcaa ttcagcgcga gcagactcat
      181 attgcgcaac ctccccgagt cccgcggacg ccagcatcgc caccatcagg catttttctt
      241 tatgctgctg ttgtaaatcg ccatacagcg ataacaggtc aggttgtgaa acagcaaaga
      301 aatccgcctc aatactggtt ttcgccatct cttgcgccca ctgtttcatt tcactaaaca
      361 gttgctgtgc ggtttgctgt tcacccagca gtcgcagcgc cattccttgc cagaagagat
      421 aatcaaccgg ctgatcgttg taataactgt ggatgttaat ggtgcgatcg ccggtcgccg
      481 ccagacgtaa acaacgcatc gcttcagttt catcgccctg cgcgttggcg catatcgcct
      541 gccagaacca gatgtcgtta tcagtttgcc ccggtaaacg gccttcgctt aaattctccg
      601 gataatgcag cgcggcatga agcagttcgc tggcctgctg cggctctctg gcatcaagat
      661 gctgccaggc gcgtaataac tggttgagga taaactgact ggtgaccttc ccttccccgc
      721 cttcccacgg gtggaattta cgcgtggcga gaatgtccgc cgctttgtct gcctgacccg
      781 tgagatgcca caaattgagc agttctgcgg tcatgtcgtc gcgtttcagc gcaatttcca
      841 gattattttc cagacgcgcc agtcgtttct ccggtgtggc tccacttaac ttatcaagca
      901 aatcccgttc gaaaagcaga cgtgcatcct gcggcgcaag ctgataagca ttatcaagat
      961 aacgcgcggc cagctcataa tcgtgttgct tattccacgc atggatcgct aacccgcgcc
     1021 agccgtcggc aaactccggc gacatctcta cgcaacgttg ccaaaaggca atggctttgt
     1081 tgtagctacg tttgttgtag tagaagcagg ccagtaaatg gcgagcaaac cagcactctt
     1141 caatactctc cagcgccgcc acttcttcca gcgtattcgg gaaacggaca aactgcggga
     1201 agacatcaat ggcttttgcg accagttcgc cacgttcggc tttcggcagc aagctggctt
     1261 gcaggtaaag cggcagcgtg cgctggcagt ccagtgcgtt cagcatctct gccgccaggg
     1321 tgggcattcc ccagttaatc agttgcccgg cggtcatcag ggcgttaacg tcgcgtccct
     1381 gacacagacc gcgccactgc gcgagagctg attcgctacg accatcgaac cagttcagcc
     1441 accacagagt ggcgttcagc ggataatcgc gcagcagttt ctcgcgctgc acacgcgcgt
     1501 tgtcctgacg accacttaac accagcagca gattatgcag gcaaagcact tcctgattgg
     1561 ttgggcaggc gcgaagactt tgttggcaaa aatccagacc agcgtcgaag ttaccattac
     1621 gcgccgccag tcgtgccagg ccataatagc caccggcttt gctgttgccg ctccagaccg
     1681 cacgccagaa atcctcttcg gcttgttgat attgtccctg acgttcgtaa gcactggcgc
     1741 gaatcaaact cgcctgtccg cactgcggat ttttgttcag cgcatgtgcg cgtttcagag
     1801 cctgagtggc atacgccacc gcttgcggga aatcggcgcg gttatattcc agcatcgcca
     1861 gcgccaggtt acagcggtaa tccagcggat ccagcgccac gccgcgcagg tagtaatcga
     1921 acggtgaacg gctggcgtga tgatattgct ccagatgctg accgataaac caggcttcat
     1981 ctgtactggt aatgtcttgt gctgccagtg gcgctttggc gacgtccagc aacggcaact
     2041 cttgcggctg atgttcctga taactcagta caatattgcc gtcggcatcg gagagctcaa
     2101 tggtcagcct ttcaggattg ataccgtgca acacgccctg gatggcggtc gcaggcatca
     2161 gtgccacggc atcatcaagt aacgcgttgc atttgccgat ttcgcggatc accaggcggt
     2221 atccgttcaa cggagagatg gcatacagcc cccactcaat cccccgctta ctacgctgga
     2281 gttttatcac cgcatcgcgg gaggcatttt gcaccatgcc caaagaatga taaggcagga
     2341 aatactgctc aaaacgcttc tcttcgtaag catcaagcca ggtaaaatcg ggctggttat
     2401 cggcaaaaat accggtcatc agttcgatat acgggccgtt attgtcggtc agactcttat
     2461 cccacgcctg gccaaattca ctgtgtcccc aactccactg ttttttacct ggcgcaatat
     2521 ggtggttggc aacgtgcagc aaaccgccat cttcatcgtg acaccacgcg ccgacaaaat
     2581 cgtactgcga tttttcggcc atatatgagg ttgtaacagg cacattttta tagcaagaaa
     2641 tgtccactcc ggcggagtag tccactttgt agtaagtgcc ggtggcgatg gggaaagcgg
     2701 agacggcccg tttgccgtga tcaaacaccg cagtcacatc cggtgggaaa acgctctgat
     2761 gcccttcccc ccctttcact gccgggttgg cccaccacaa gaaatgacgc ggcgtggcgt
     2821 taccgttata gacgcggctg gcgatttcca gcgccgcccg gtcagggcgc agggtgaaac
     2881 ctgtcatcac ctgtaaacca tgcatcggct ccgtttcgcc tacccacacc gtctgtgcac
     2941 cgtcttcatg ggcttcgagg gtgaaatcaa cgggcataaa ggtggtcggg cgatgatgtt
     3001 gcggccagtt aaactcaatc ccaccggaaa tccacggccc cagcagcccc accagcgcag
     3061 gtttaatgac ttcattgtga taaacaaaat cgcgctgttt cactttatcc cacgcgcgat
     3121 gcacccgacc gcccagttcc ggcaggatca tcactttgat gtagtcgttt tccagccaca
     3181 ccgcctgcca ggatttcagg gttttctgct cgctcagcgt atcggtcacg ccgtagggat
     3241 aaaccgcgcc ggacgatccc tgataaacgc gattttccag gaacatggga tgtatatcct
     3301 gcggcccggt ttcataggtc gggatctcaa cgcgctcttg ccacactttt actggagtca
     3361 tggtgccctc aatattaaca agacatactg aattaaaaga tttgtggcag tgtattgaac
     3421 aatctggcaa tgttttcgcg gaataatcac gcaattaact aaacaaggtt tagtgaagat
     3481 gagagcctgc attaacaatc aacagattcg ccaccataac aaatgcgtga ttctggaact
     3541 gctgtaccgg caaaagcgcg ccaataaatc aacgctggcc cggctggcgc aaatttcgat
     3601 tccggcagtc agtaatattt tgcaggaact ggaaagcgaa aaacgggtgg tgaatattga
     3661 cgatgaaagc cagacgcgcg ggcatagtag cggtacatgg ctgattgcgc cggaaggtga
     3721 ctggacgctg tgcctgaacg tgacgcccac cagtattgag tgtcaggttg ctaatgcttg
     3781 tttaagtccg aaaggtgaat ttgagtattt acagattgat gcaccgacgc cgcaggcgct
     3841 gctgtccgaa atcgaaaaat gctggcatcg ccaccgtaaa ttgtggccgg accgcaccat
     3901 caatctggcg ctggcaatcc acggtcaggt tgatccggtg accggcgtgt cgcaaaccat
     3961 gccgcaagcg ccgtggacaa cgccggttga ggtgaagtat ctgctggaag agaagctggg
     4021 cattcgggtg atggtcgata atgactgcgt gatgctggcg ctggcggaga aatggcaaaa
     4081 taattcgcag gaacgggatt tctgcgtgat caacgttgat tacggcattg gctcgtcgtt
     4141 cgtgattaac gagcaaattt atcgcggcag tttgtatggt agcggacaaa ttggtcacac
     4201 catcgttaat ccggatggcg tcgtctgcga ctgtggacgt tacggctgcc tggaaaccgt
     4261 cgcctcgtta agtgcattaa aaaaacaggc gcgggtatgg ctaaaatcac aaccggttaa
     4321 tactcagctt gatcctgaaa aactgacaac cgcgcagtta atcgctgcct ggcagagtgg
     4381 agaaccgtgg atcaccagct gggttgatcg ctctgccaat gccattggtt tgagtctgta
     4441 taacttcctc aacatcctca atattaatca gatttggttg tacggtcgca gttgtgcctt
     4501 tggtgagaac tggcttaata ctattattcg ccagacagga tttaacccgt tcgaccgcga
     4561 cgaaggaccg agcgtgaaag cgacgcaaat tggcttcggg caattaagcc gcgcacaaca
     4621 ggtgctggga attggctatt tgtatgttga ggcgcagtta cgacagattt gatggcgcga
     4681 taacgtagaa aggcttcccg aaggaagcct tttttcaaca gattaaccgt ttcgcttatg
     4741 cgtaaaccgg gtaacgtgcg cagatgtcga gaactttacc tttgatgcgc tcgataacgg
     4801 cttcatcatt gatgctgtcc agcacgtcac acatccagcc agccagttct ttcgcttctg
     4861 cttctttgaa gccgcgacgc gtaattgccg gagtacccac gcgaataccg gaggtcacaa
     4921 acgggctctt cggatcgttc ggtacgctgt ttttgttgac ggtgatgtta gcacggccca
     4981 gagcggcgtc tgcttcttta ccggtcaggt ttttatcaac cagatcaacc aggaacaggt
     5041 ggttatcagt gccgccggaa accactttgt agccgcgctc gaggaacact tctaccatcg
     5101 ctttagcgtt tttcgcgacc tgctgctggt aagttttgaa ctcaggctcc atcgcttctt
     5161 tcagagcaac cgctttaccg gcgattacgt gcatcaacgg accgccctga ccaccaggga
     5221 aaacggcaga gttcagtttt ttgtacagct cttcgctacc acctttcgcc aggatcaggc
     5281 cgccgcgcgg acccgccagg gttttgtgag tggtggtagt aacaacgtga gcatgaggaa
     5341 ccgggttcgg gtagacgcca gcagcaacca ggcccgcaac gtgcgccata tcaacgaaca
     5401 ggtaagcacc gatgctgtca gcgatttcac gcattttcgc ccagtccacc acgccggaat
     5461 atgcagagaa accaccgata atcattttcg gcttgtgttc tttggcttgt ttttccagat
     5521 cggcgtagtc gatatgaccg gtagcatcga taccgtaagg aacgatgttg tacagtttac
     5581 cggagaagtt aaccggagaa ccgtgagtca ggtgaccgcc atgcgccagg ttcataccca
     5641 gaacggtatc acctggttcc agcagcgcgg tgtagaccgc aaagttagcc tgggagccgg
     5701 agtgcggctg gacgttagcg tagtcagcgc cgaacagttc tttcgcacga tcgatcgcca
     5761 gttgttcaac gatatcaaca tactcgcaac cgccgtagta gcgtttgccc ggataacctt
     5821 cagcatattt gttggtcagc tgagaaccct gcgcctgcat tacgcgcggg ctggtgtagt
     5881 tttcggaggc gatcagttcg atgtgctctt cctgacgtac tttttcctgc tccatagcct
     5941 gccacagttc ggcatcataa tcggcaatgt tcatttcacg ctttaacatc cgcatctcct
     6001 gactcagcta acaataaaat ttttggcctt tataggcggt cctgttggac aacggcgaac
     6061 agtataaccg aatcattgtg cgataacagg tcttgacaaa ggaatttacg caaacgatta
     6121 ccttcaggct acgcaaggct ttggagaata aagagcttgc aaccggaaac ggatttcttt
     6181 tcaggtttgt gatgcaaatt tttcacttca tcacattctt tctgaaaaac accaaagaac
     6241 catttacatt gcagggctat tttttataag atgcatttga aatacatcaa ttaagatgca
     6301 aaaaaaggaa gaccatatgc ttgacgctca aaccatcgct acagtaaaag ccaccatccc
     6361 tttactggtg gaaacggggc caaagttaac cgcccatttc tacgaccgta tgtttactca
     6421 taacccagaa ctcaaagaaa tttttaacat gagtaaccag cgtaatggcg atcaacgtga
     6481 agccctgttt aacgctattg ccgcctacgc cagtaatatt gaaaacctgc ctgcgctgct
     6541 gccagcggta gaaaaaatcg cgcagaagca caccagcttc cagatcaaac cggaacagta
     6601 caacatcgtc ggtgaacacc tgttggcaac gctggacgaa atgttcagcc cggggcagga
     6661 agtgctggac gcgtggggta aagcctatgg tgtactggct aatgtattta tcaatcgcga
     6721 ggcggaaatc tataacgaaa acgccagcaa agccggtggt tgggaaggta ctcgcgattt
     6781 ccgcattgtg gctaaaacac cgcgcagcgc gcttatcacc agcttcgaac tggagccggt
     6841 cgacggtggc gcagtggcag aataccgtcc ggggcaatat ctcggcgtct ggctgaagcc
     6901 ggaaggtttc ccgcatcagg aaattcgtca gtactctttg actcgcaaac cggatggcaa
     6961 aggctatcgt attgcggtga aacgcgaaga gggtgggcag gtatccaact ggttgcacaa
     7021 tcacgccaat gttggcgatg tcgtgaaact ggtcgctccg gcaggtgatt tctttatggc
     7081 tgtcgcagat gacacaccag tgacgttaat ctcttccggt gttggtcaaa cgccaatgct
     7141 ggcaatgctc gacacgctgg caaaagcagg ccacacagca caagtgaact ggttccatgc
     7201 ggcagaaaat ggcgatgttc acgcctttgc cgatgaagtt aaggaactgg ggcagtcact
     7261 gccgcgcttt accgcgcaca cctggtatcg tcagccgagc gaagccgatc gcgctaaagg
     7321 tcagtttgat agcgaaggtc tgatggattt gagcaaactg gaaggtgcgt tcagcgatcc
     7381 gacaatgcag ttctatctct gcggcccggt tggcttcatg cagtttaccg cgaaacagtt
     7441 agtggatctg ggcgtgaagc aggaaaacat ttattacgaa tgctttggcc cgcataaggt
     7501 gctgtaattt gatgttgccg gatggaaaca tccggcaacc cttgacgcgg tttaaattgc
     7561 cgcgtcgtcc tcttcaccgg tacggatgcg aatgacccgt gccacgtcaa agacgaagat
     7621 tttaccgtca ccgattttgc cggtttgcgc cgtgcgaata atggtatcga cacaggtatc
     7681 gacaatgtcg tccggtacga caatctcaat tttcactttc ggcagaaaat ccaccatata
     7741 ctccgcgccg cggtacagct cggtatggcc tttctggcga ccaaagcctt tcacttcggt
     7801 caccgtcatg ccggtaatac cgacttcggc cagtgcttcg cggacatcgt ccagcttgaa
     7861 gggttttata atcgcatcaa tctttttcat gctattcctt gaaaaggtcg cctgtctttt
     7921 gatctgctaa acgtaacaca taacgccaat tcattccttg aaatcgtttg catccagctc
     7981 gtgtcgggaa agcagtttat aaaattctgt ccggttgcgc cccgccattc tcgccgcgtg
     8041 ggtgacgttg cctttggtaa tttgcagcag cttacgcaaa tagttgagtt caaactgatt
     8101 acgtgcctca acaaaggttg gcagcgccgt gttttcaccc tccagcgcct gctctactaa
     8161 tgcatcgcta ataaccggag atgaggtcag cgccacgcac tgttcaatca cgttgaccaa
     8221 ctggcgcaca ttacccggcc agctagcggt catcaggcgt ttcatcgcat cagtggagaa
     8281 cgcgcggaca aacggtttat gtcgctctgc cgcctggcgc aacaggtgat ttgccagaag
     8341 cggaatgtct tctgtgcgct ctgccagagc cggaattttc aggctgacaa cgttgaggcg
     8401 gtaatagaga tcttcgcgga attccccgcg cgccatcgct tttggcagat cacggtgagt
     8461 ggcagaaata atccgcacat tgatatcaat atcgcggtta ctgcccagcg ggcgcacttt
     8521 acgctcctgc aacacgcgca gcagtttgac ctgtaacggc gcaggcatat cgccaatttc
     8581 atcgagaaat agcgttccgc cttccgccgc ctggaataaa ccttcgcgat tgctgacagc
     8641 gccagtaaac gcgccacgcg catgaccaaa cagctccgac tccagcaatt gctcgggcaa
     8701 tgcgccacag ttaatagcaa taaatggttt gctgttgcgc gggctggcgt tgtggatagc
     8761 ctgggcgaaa atctctttcc cggtgccgct ctgaccgtta atcaaaacgc tgacgtctga
     8821 ttgcgccacc agccgcgcct gttccagcaa acgcagcatc agcgggctgc gggtgacaat
     8881 tgcctcgcgc cagcgttcat cggtggctgg cgcggattgc tccagcgcat cgtcaattgc
     8941 ctgatatagc gcgtctttgt cgacaggctt ggtgaggaaa ctaaaaacgc cctgctgtgt
     9001 tgcagcaacg gcatcgggga tagaaccatg cgcagtaaga ataattactg gcattcccgg
     9061 ctgcactttc tggatttcag caaatagctg cataccgtcc atttcatcca tccgcaggtc
     9121 gctgataact aaatctactt tttcgcgatt cagtacccgt aatccttcag cgccactttc
     9181 cgccgtgacc acactgtagc cttcgctggt caggcgcagg ccaagcagtt tcagcaatcc
     9241 cggatcgtca tcgaccaata ataaatgcgc aggtttatgg ctcatcagga gtgacctcat
     9301 gggtggatgg cgcgggcttt tcactctcgt gcggcgtatc cggcgagaaa tttccagccg
     9361 gtttgcgggt cgagagctgg cgttcaatat cggtcaggtt ttccagcttg cgggtggtga
     9421 gttccagttg ctgctgtaga acgtgatgtt gctggcgcaa tgtatccagc tcgctgtcgc
     9481 tggactgctg gagtttactg taacgttggc gctcttccgc cagttgcagt tgcagcgcct
     9541 gaccgtcgcg ccagagttga tacagtgggc gaacctgtgc cgggatctcg gtacttaacg
     9601 cttcaatacg cgcgaccagc tggcggcgct catacggcgt aattttggcg tcggcgagca
     9661 aaatcccttg tttaaaggta ttttgccagc agccgtcgtc atattggcga gcttgctgac
     9721 gcgactgcgc aggcattaaa cgatcagcac aatccatcgc ccgcagccag taaagcggat
     9781 tggtttcggt tgatttacct tgcagcgccc agatgtcgct acattcagta gaaagatagt
     9841 cagccagttg ataaaccgga attttttctt ctgctggcgt atcaatggct ggcttattgt
     9901 gattctgcac gcaacccagc aatgccagac atggcagccc tgccagccac agccgtcggg
     9961 gcaataatcg ttgaaaaatg tgtcgcatat tcaccagact taaagcctat cccagtgggc
    10021 gtaattgttg cagacagtct ggacatggac agcgcggaga aaccggagcg tacatatcgt
    10081 acgtgaagat ttcgagcact gcccggagcc gaactgacaa ataaaatagc ctgataggat
    10141 aggctgttag cattatttcg tgtttttcga cgacggtaat tcaatgcgga aacaaacgtc
    10201 ttgcccgctc tcgtcgacca gatacagttc cccttgcata cggcgaatac aatccctggc
    10261 aatgcttaat cccagaccgc tgcccttcac cgcccctttt cgctggtggc ttccctgaaa
    10321 aaagggttcg aagatcatgg cgcgttcctc ttgcggaatg ggcgtgcctg tattgatgac
    10381 atcaatataa acccgcgcac catgtgaact gctgcgaagg caaatgttac cggattcagc
    10441 cccgtagtgc accgcattgg agtaaagatt atccagtacg ctcatcagca gcattggctc
    10501 cgccaggcaa gctgttgctt tgagatcgac gtcggtatgc atcattttag cccgtgcggg
    10561 caggctatga gcagaaacca ctgtctccac cagcggtgct aattcaacat tctccagttc
    10621 caccgcactg tccgcctgtt tacggttgta atcaagcagt tgttcgatca gtttttgcaa
    10681 attgcggctg ctgctatcaa gaatgctcac cacctctttt tgctctggcg taagcggccc
    10741 gacaacctgg tcagccagta attcagtgcc ctcgcgcata ctcgccagtg gcgtttttaa
    10801 ttcatgagat aaatgtctta aaaattgatg gcgttgggat tccagccatg acaggcgctc
    10861 acttaaccaa agaatacgtt gcccaaccga gcgtaactcg ctcggtccac tgaacgaaac
    10921 gctattgccc agagaacgcc cttcccccag acggttgatc atgcgctcga tatttttcac
    10981 cggcccgata atcatccgcg tgaaaagtag caccatcacc agactcacca gaaatagcac
    11041 cagcgattgc caaccaaaat attgcccacg ttcggcgatt tcacgctgaa gttgctgccc
    11101 acgagagaac accactgtgc gcgtggcctg caccatttcg gtattggcac tggcaaaggc
    11161 ttcaagacgc gcggcggcgg cagcatcggg accactgttg ttacactgaa gttgggccag
    11221 attgttcaaa tcctgacgca atgcctggta aagtttatcg tctggcagta cgcctgcgtg
    11281 ggcatcgagc atttcgctgt aacgcttgcg ctggctttga taaaccttcg caagcgtagg
    11341 gtcgtccagc acgcaatact gacggtagct acgctccatc tccagcgccg cgttggtcat
    11401 cgcttcacta cgccgggcat caataagcgt agtgcggtta accagcgccg cctgatcgct
    11461 aagcgcattc aggctttgcc aggcttgcca tgccagcacc aacaggggta gtagaattag
    11521 caaaaatgcc agcattacca gttgtcgtaa tgagcgggga aaaacgggcc agcgtttcaa
    11581 ggtgttactc tcgtcagacg cgaatagcct gatgctaacc gaggggaagt tcagatacaa
    11641 caaagccggg aattacccgg ctttgttatg gaataaggcg gtgcctaact cgacgtttcg
    11701 cccgatggtt gatatagcta cgctgatatc agaagttgga cggcaggcac cttgttgtgc
    11761 gtcattcgaa ttttatgtag cacgtcccga aggggctgac ataagtcggt gaatgagcca
    11821 ctgcttacta ttatgcagta actgtgccaa taaagaaaat agtttggtaa cgtactgatt
    11881 atacgttgct ttgagggatt tatggcttct tcgctatttg aatgtaaatc agccactgtg
    11941 tcgctaaaaa gagacagctt aagataaact tattagatta caataaaatc aatcacttaa
    12001 gtgtcgccag aaagcgacac ggtaaaccac ccattgtcgt gatttacaga cacaaaaaag
    12061 ctcccggagt tgggagctta tgatagtggt tggtgcttaa tgccgcatcc gggctgcaaa
    12121 accaatgaac tgatgaatta ccccaactgc ttacgcgcat tgcggaaaat gcgcatccat
    12181 gggccatcct cgccccagtt ttccggatgc caggagttgc tgacagtacg gaaaacacgt
    12241 tccgggtgcg gcatcataat ggtgactcga ccactttcag tcgtgactgc cgtaataccg
    12301 ttcggtgaac cgttcgggtt ggccgggtag gtttcagtga ctttgccgaa gttatcgaca
    12361 tagcgcagtg ccaccagccc tttgctttcc agtgccgcca gatgcgccgc atcacgcact
    12421 tccacgcgcc cttcaccatg agagacagca atcggcattt gcgagcccac catcccctgc
    12481 aacaacagag acgggctttg ggttacttca accaggctga aacgcgcttc aaagcgatcg
    12541 gaggtattgc gcacaaaacg tggccacaac tcactacctg ggatcagttc gcgcaggtta
    12601 gacatcatct ggcaaccgtt acataccccc agcgccagcg tttgcggacg gtggaagaag
    12661 gttgcaaact catcgcgtac acggtcattg aacaggattg acttcgccca accttcaccg
    12721 gcacccagca catcaccgta ggagaaacca ccgcacgcga ccagggcgtg gaaatcttcc
    12781 aggcccgtgc gtccggtcag caggtcactc atatgcacgt cgatagcatc aaagcctgca
    12841 cggtggaaag ctgccgccat ttcaacatgc gagttcacgc cctgctcacg cagtacggca
    12901 actttcggac gtgcgccagt ggcaatatac ggtgctgcca catcttcgtt gatatcgaac
    12961 gacagtttta cattcaggcc cggatcggcg tcgttagatt tcgcctgatg ctcctgatcg
    13021 gcacactccg ggttgtcacg caggcgctgc atctgccagg tagtttctgc ccaccagaca
    13081 cgcaacgtgg tgcggctttc gctgaataca gtctgcccgt tggcggtaat cacaaaacgg
    13141 tcaccggaaa ccgcctgccc tacataatgg acacaatcag caagcccatg ctgtgccagt
    13201 acggactcga ccgcttcacg gtcagcggca cgaacctgaa tcaccgcacc cagttcttcg
    13261 ttaaacaacg ccgccaggcg atcgtcgccc agagaggcaa tatccgcgtt aatgccgcaa
    13321 tgaccagcaa aggccatttc cgccagcgtt accagcaggc cgccatcaga gcggtcgtgg
    13381 tatgcgagca gcttacgctg tgcaaccagc gcctgaatcg cgtcatagaa gcctttcagt
    13441 tgcgcgacgt cgcgtacatc tgccggtttg tcgccaagct gacgataaac ctgcgccagc
    13501 gccgttgcgc ccagcgcgtt attgcctttg cccaaatcaa tcagcaatag tgcgttatct
    13561 tcggtagaaa gctgtggcgt gatggtgtga cgcacatctt ccacgcgggc aaatgcagaa
    13621 atcaccagcg acagcggcga cgtcatttcg cgctcttcgt taccttcctg ccagcgggtt
    13681 ttcatcgaca tagagtcttt acccaccggg atcgtcaggc ccagcgccgg acaaagctct
    13741 tcgcccacgg ctttaacggc ttcatacagg cccgcatctt caccagggtg gcctgccgcc
    13801 gccatccagt tggcggaaag tttaatgcgt ttgatatcgc caatctgtgt tgcggcaata
    13861 ttggttaacg cttcaccgac cgccagacgg gcagaggcgg cgaaatccag cagcgcaacc
    13921 ggcgcacgct cgccaatcgc catcgcttca ccgtagtagc tgtcgaggct ggcggtagtg
    13981 accgcgcagt tagcgaccgg cacctgccac ggacccacca tctgatcgcg cgctaccatg
    14041 ccagttacgc tgcggtcacc gatggtcacc aggaaagttt tctccgccac ggtcggcaga
    14101 tgcagtatgc gtttcaccgc gtctgcaatg gtgatccctt cacggaccag cgcatcgccc
    14161 ttcgctttca gcgtttgtac atcgcgggtc atcttcggcg ttttaccaag caggacgtcc
    14221 agcggcagat cgatcggctg attatcaaaa tgacgatcgt gtagagaaag atgcagttct
    14281 tcggtcgctt caccaatcac cgcgtagggt gcgcgctcac gcttacacag ttcgtcaaac
    14341 agcggtaatt gatcggcagc aaccgccagc acgtagcgtt cctgggattc gttacaccag
    14401 atttccagcg ggctcatgcc tggctcgtcg ctcagaatgt cgcgcagttc aaatttaccg
    14461 ccacgcccgc cgtcgctcac cagttccggc atagcgttag aaagaccgcc tgcgccaacg
    14521 tcgtggataa acagtattgg gttggcatca ccaagctgcc agcaacggtc aatcacttcc
    14581 tggcagcgac gctccatctc cgggttgtcg cgctgtacgg aagcaaagtc gaggtcggca
    14641 tcagactgac cagacgccat ggaagacgcc gcgccgccgc caagaccgat gttcattgcc
    14701 gggccgccga gaacgaccag cttcgcgcca acgttgatct cgcctttttg tacgtgatcg
    14761 gcgcgaatgt tgccgatccc gcccgccagc atgatcggtt tgtgataacc gcgcagctct
    14821 tcgccgttgt ggctgttcac tttttcttca taagtacgga agtagccgtt cagtgccgga
    14881 cgaccaaatt cgttgttaaa cgccgcaccg cccagcgggc cttcggtcat gatgtccagc
    14941 gcggtgacaa tgcgctcagg cttaccgaaa tcttcttccc acggctgttc gaagccaaga
    15001 attcgcaggt tggaaacgga gaaaccaacc aaacccgctt tcggcttcgc gccgcgcccg
    15061 gtggcacctt catcgcggat ttcaccgccg gaaccggtcg ccgcgcccgg ccacggagaa
    15121 atcgccgtcg ggtggttgtg agtttcgact ttcatcagaa tatgcgccgg ttcctgatgg
    15181 aaatcatagc ggcccgtttc gtggtcagca aagtagcggc ccacttcaga accttccatt
    15241 acggcggcgt tatctttata agcagagaga acgtgatctg gcgtggtttc gaaagtattt
    15301 ttgatcatcc tgaacagcga tttcggctgt tgttcaccgt cgataatcca gtcggcgtta
    15361 aaaattttgt ggcggcagtg ctcagagttc gcctgagcga acatatacag ctcgatgtcg
    15421 ttcgggttac gaccaagctt tgtgaaagca tcctgcagat agtcaatttc atcttccgcc
    15481 agagccaggc caagacgcag gttagcgtcg atcagcgcct gacggccctg ccccagcaaa
    15541 tcaacgcttg tgaccggagt cggttgatgg tgggcaaaca actgctctgc atcatctaaa
    15601 tcaaaaaaga cagtttccat catgcggtcg tgcagttcag cggtaacctg ctgccattgt
    15661 tcattggtca gcgtaccggc ttctatatag taagcaacgc cgcgctcaag gcggtttacc
    15721 tgttgtagcc cgcagttatg ggcaatatcg gtcgctttcg aagaccaggg agagatggtg
    15781 ccaggacgcg gggtcaccag caggagtttg ccttgcgggg cgtggctggc gagtgccgga
    15841 ccatatttca gcaggcgttc aagttgtgcg tgctcatcat cgtttaacgg cgcattgagg
    15901 tcagcaaaat ggacatactc ggcgtaaata ttgtgaaccg ggagcctggc agcctgaaaa
    15961 cgtgccagca gtttgttgat tcggaatgcc gacagtgcag gcgaaccacg cagaatttcc
    16021 atcataagtc tctcgtcttc taagctttcg gtgtacccaa ggggggggga aacgggcgtc
    16081 attataaaga atctgatgcg ctgacgaaac cgtttgcgtg gaaataaaat caccatcgtg
    16141 aattagcaac gcgtgccgcc aatggctgta ataagttgcc atctggcgca ggtttacgca
    16201 aaatgccgct catttatgag taaacctttc actattatta cgttttttca agctgggacg
    16261 cgcacgacac agagaattaa ctaattgaaa aaattaaaga ttaattatct gttcatcggc
    16321 attctggcac tgctgctcgc ggtcgctctc tggccatcca ttccctggtt tggtaaagcc
    16381 gacaaccgta tcgccgccat tcaagcgcgg ggagagttgc gtgtgagcac cattcatact
    16441 cccctgactt ataacgaaat caacgggaaa ccttttggcc tggattacga actggcgaaa
    16501 cagtttgccg attacctcgg cgtaaaactg aaagtgaccg tgcggcagaa tatcagccag
    16561 ctgtttgacg accttgataa tggtaacgcc gacctgctgg cggcaggact ggtctataac
    16621 agtgagcggg taaaaaatta tcagcctggc cctacctatt attccgtgtc acaacaactg
    16681 gtttataaag tgggtcagta tcgcccacgt acgctgtgca acctgacggc ggagcaactc
    16741 accgttgcac cgggtcatgt ggtggttaac gatctccaga ccctgaaaga aacaaaattc
    16801 ccggaattaa gctggaaggt agacgacaaa aaaggctctg cggaattaat ggaagatgtc
    16861 atcgaaggaa aactcgatta caccattgct gattctgtcg ccatcagcct gtttcagcgc
    16921 gttcacccgg agctcgccgt agcgctcgat atcaccgatg aacaaccggt gacttggttt
    16981 agcccgttag atggcgataa taccctttcc gccgccctgc tcgacttctt caacgaaatg
    17041 aatgaagacg gtacgctggc acgcattgaa gagaaatacc tggggcatgg cgatgatttt
    17101 gattacgtcg atacgcgcac atttttacgc gccgtcgatg cggtactgcc gcagttaaag
    17161 cccctgtttg agaaatacgc cgaagaaatt gactggcgtt tgctggccgc tattgcttat
    17221 caggaatcgc actgggatgc acaggccact tcaccgacgg gtgtgcgcgg catgatgatg
    17281 ttaaccaaaa ataccgcgca aagcctcggc attacggatc gtaccgatgc cgaacagagc
    17341 atcagcggtg gcgtgcgtta tttgcaggat atgatgagta aagtgccgga aagtgtgccg
    17401 gagaacgagc ggatctggtt tgccctcgct gcgtacaata tgggctatgc gcatatgctg
    17461 gatgcccgcg ccctgacggc aaaaaccaaa gggaatcctg acagttgggc tgacgtaaaa
    17521 cagcgtctgc ctttacttag ccagaaaccc tattacagca agctgactta cggctatgct
    17581 cgtggacatg aagcctacgc ttatgtcgaa aatattcgta agtatcaaat tagcctggtg
    17641 ggttatctgc aagagaaaga gaagcaggct acagaagcgg cgatgcaact ggcgcaggat
    17701 tatccggcgg tatcgcctac ggagttgggc aaagagaaat ttccttttct ctcgtttctt
    17761 tcccagtcgt catcaaacta tttgacccat tctccctctc tgctgttttc caggaaaggg
    17821 agtgaagaga aacaaaatta atccgtcgag gattgcgctt ttttctgcgc tttaatttcc
    17881 tggcggcgca tgcgaaagaa gtcactgagc aacgccgcgc actcatccgc cagtattcct
    17941 tccgtaattt ccactcggtg attcataccc ggatgatgca gcacatccat taaagatccc
    18001 gcagcgccag ttttcgcgtc acgcgcacca aagaccacgc gaccaatgcg actgtggatc
    18061 atcgctccgg cacacattac acatggttca agcgtgacat acaacgtggc gtcgatcaga
    18121 cgataatttt gcatcaccag accaccctgc cgcagggcca tgatttctgc atgtgcggtg
    18181 ggatcatggc gaccaatcgg gcggttccaa ccttcgccga ttacccgatt gttatgcact
    18241 aataccgcgc cgaccggcac ttcccgctca tcccaggcac gtttcgccag cgtcagcgcg
    18301 tgacgcatcc agtattcgtg gctaaattcg acttcagaca aaaagaaaac tccggttata
    18361 aaagcgcggc gcattataca cggacgctat gctttactct attccagttg ctggagttca
    18421 ccgcgcgggg ttactcgcca acgatgctga cagaaataaa gcagcggatt gtcctgatta
    18481 ctgtcgctat agccactgta cagccgcagc ggagtgccga ttttgcgctc cagttgtgcg
    18541 accttttcat gtcccagaca acgcatcgtc aatacccaac caccatagcc acgctgaatt
    18601 tggctggcga taagattaac ccgcggcagc cagggcttat cgaaataaac cgcttcaacc
    18661 agcggctgcg gagagccggt aatcaaccag atatcagcat cggaacttaa caggtaggtg
    18721 gttaatcgct cctgaaccag cggaaaggcg gtaacattgt cgcgaaacca gcgcacgaaa
    18781 tcggcctgca acgtctgtaa acgtgcttcg ctgtgaccaa aagtgcaccc ccacagaagc
    18841 agactcatcg gccagcgtgc cgcacgacct tttatcaata acgcaatggc tataatcggt
    18901 aacaacggca ggacaagtaa cgcattcagc ggttggcgac gtagtaaata gcgcagaaaa
    18961 ctgccgaaca tatcctgctg atgcaatgtt ccatctaagt caaaaaacac cacacgacgc
    19021 tcgtgagttg ccaaaccata ctcctctgga ctgaaacatc ctgattaatt ttcgctacta
    19081 catagcctaa cagatagatc atcacttttc cggcaacaat cgaccgcatc atggctaact
    19141 ggaattttta attcatggca attagcggca atggaatata aaattcactc gcgtgtgtct
    19201 catattgcct gttgtcgcca ctatttcatc gcgaggaaag atatgaacgg cttacttcgt
    19261 atccgtcagc gttaccaggg gcttgcccag agtgataaaa aactggcgga ttatctgctg
    19321 ctacaacctg atacggcgcg ccatttaagc tctcagcaac tggccaacga agccggagtc
    19381 agtcagtcca gcgtcgtgaa gttcgcgcaa aaactcggct ataaaggttt tccggcgctt
    19441 aagttggcgt tgagtgaagc gctggcaagc cagccggaat cgccctccgt gcccattcat
    19501 aaccaaatcc gcggtgatga tccgttacgg ctggtcggcg aaaaactgat taaagaaaat
    19561 actgccgcta tgtacgcaac gctaaacgtt aatagtgaag agaaactgca tgaatgcgta
    19621 acaatgttgc gctctgcgcg gcggataatt ctgaccggta ttggcgcttc gggtctggtg
    19681 gcgcaaaact ttgcctggaa gctgatgaag attggcttca atgctgccgc agtgcgcgat
    19741 atgcatgcgc tactcgcaac agtacaggcg tcgtcccctg acgatctgtt attagccatt
    19801 tcctacaccg gtgtacgacg cgagttaaac ctggcggcag atgagatgct gcgagtgggc
    19861 ggaaaagtgc tggcgattac cggctttact ccgaatgccc tgcaacagcg tgcttctcat
    19921 tgcctgtata ccattgccga agaacaagcg acaaacagtg cttcaatctc tgcttgtcac
    19981 gctcagggaa tgttaacgga tttgctgttc attgcgctga ttcagcagga tctggaactg
    20041 gcaccagaac gtattcgtca tagtgaagcg ctggtgaaaa aactggtctg agtaaagaat
    20101 gcgcgtataa tgcccgcccg gtttgtgttg ttttgagagt ttccttatgg cgttgttaat
    20161 cactaaaaaa tgcatcaatt gtgatatgtg tgaacccgaa tgcccgaatg aggcgatttc
    20221 aatgggagat catatctacg agattaacag cgataagtgt accgaatgcg tagggcacta
    20281 cgagacacca acctgccaga aggtgtgccc gatccccaat actattgtga aagatccggc
    20341 gcatgtcgag acagaagaac agttgtggga taaatttgtg ctgatgcacc acgcggataa
    20401 aatttaatat tctactctgg aagtagagta ttaattatat tactgggaag ccttaacgcc
    20461 attatattta tttaattgat gacattagca taatcattca ctaagttaat ttatatagta
    20521 tctgccaaga cacttattta tagttattaa aggcgcgtcc gattggttca ccggacgcac
    20581 cttaagtacg tttccttgtg ttataagaac agaaggatca gctgtaaaac agcaatgatg
    20641 attttgatga cccgtttaat caggtatcgg caatcagtca ttcgtttttc cttaaacaag
    20701 gaatgcagcc gttcagatta gcccttacat ctccccaaaa ctgaacgtgc gagttattga
    20761 gggtgcatgc tgcactccac accagagctt tgacgacacc actcgtttca atgggggaat
    20821 tctgtggcat ggtgtaaagc acagcaaaat cttcaataac gaagccaatt ttaatgtact
    20881 tacgaattgg cggtcacgtt aatctttcca tcaatattgc tttcttcgta aaggctcgag
    20941 tttttatgct aaagattgca agttgcttgt aaaagataag tacactgatc cataatcgct
    21001 gttgttgagg gtgcatgctg cacaaaatta aagttaaaaa gtaaaacccc cgttccttac
    21061 cagttcgggg gttttacttt ttaaagagaa cggtattatt ttaactttca ataattaccg
    21121 tggcacaagc atagtggcgt tcatctgcca gcgttacatg catatttaca acgccgagct
    21181 tttccgccag ttttaatgcc tcaccccata gccgtagccg tggtttgccg agctcatcat
    21241 tgaatacttc aaattgatta aacgccagac cattgcggat cccggtgcca aacgcttttg
    21301 ctgcggcttc tttcacagca aaacgcttcg ccagaaaacg caccggctgg tggtgcgttt
    21361 tccagattgc ccattcgtta tcgcttaata cgcggcgtgc taggcgctca ccggatcggg
    21421 cgatcactgc ttctatgcga gcgatctcta cgatatccgt gcctaaacct aatattgcca
    21481 ttagccacgc gcttccagca tcagacgctt catttctgcc accgcatctt tcagtccggt
    21541 catcactgca cggccaataa tggcatgacc gatattcagt tcatgcatct cagggatggc
    21601 ggcaatggct ttcacgttgt gataggtcag accgtgtccg gcgttaactt tcagaccgag
    21661 actagcggca aaggtcgcgg ctttggcgat acgcaccagc tcttgcgcct gttcggcgtc
    21721 agttttggca tcagcatagc aaccggtgtg gatctcgata aacggtgcgc caacctctgc
    21781 cgcagctttg atctgctctt catcggcgtc gataaagaga gaaacctgaa tcccggcatc
    21841 tgtcagacgt ttgcaggcat cgcgcatttt ttcacgctgc cctgcaacgt ccaggccgcc
    21901 ttcggttgtt acttcctgac gcttttccgg taccaggcag caaaaatgtg gcttcgtctc
    21961 aacggcgatc gccagcatct cttcggtcac tgccatctcc agattcattc gggtatccag
    22021 cgtctgccgc aggatgcgca catcgcggtc agtaatgtgg cggcgatctt cacgtaaatg
    22081 cacggtaatg ccgtccgctc ccgcctgctc ggcaataaac gccgcctgca ccggatccgg
    22141 gtaagcagta ccgcgtgcgt tacgcagcgt tgcaatatgg tcaatgttga cgcctaacag
    22201 taattcagcc atgacaatcc tcatcattca taatgtgttt tcaccgttcg cttaggcata
    22261 aactgccgga acagttccct gctctttaat ggtttaccgc caagatacgg cttaagcgcc
    22321 atgcgggtaa agcgtttcgc ggcgcgtagt gtgtctgcgt caggaaattc ccgcgcgttt
    22381 aacgctttta actgccttcc ggtgaacgtt ttattgtcga taacgacgct tgcgataaac
    22441 cctttttctt cgcgataacg atacgtcatg gtgtcatcta ccggctcgcc gctacccgcg
    22501 caataggtaa aattgacgcc atagcccaga tgcccgagca atgccagttc aaagcggcgc
    22561 agcgcgggtt ctggcgtacc agtggcacct gcaagagact gaatgcagtg caaataatcg
    22621 aaaaagagtt cagagaagcg cgtctcgtat tccagtacgc gggagagaag ttcgttgatg
    22681 tacagaccgc tgtaaagcgt gataccgctt aatggcagcg ccagcgagac agcttcagca
    22741 ctgcgcagcg ttttgacttc gccacgcccg ccgaaacgta gcaagagagg ggtgaaaggc
    22801 tgtaatgcac ctttcagagt agagcgttta gagcgtgcgc ctttggcaac cagacgcacg
    22861 cgacccgatt cctccgtgaa gacgtccagc atcaggctgg tttcgctcca cgggcgacta
    22921 tgcaggacaa atgcgcgctg ccagccttcc atcggagtga ctcttaaaga tcgtcaacgt
    22981 aaccgagact gcgcagtgcg cgttcgtcgt cggcccaacc ggatttcact tttacccaca
    23041 gttcaaggtg gacaggcgct tcgaacattt cctgcatgtc tttacgcgct tcaatcccga
    23101 tggttttgat cttggcccct ttgttgccaa taaccatctt cttctgccct tcacgctcaa
    23161 cgagaatcaa accattgatg tcataaccac cgcgttcgtt agagacgaaa cgttcgatct
    23221 ccacggtcac ggagtacggc agttcagcgc cgaggaaacg catcagtttt tcgcggatga
    23281 tttcagacgc cataaaacgc tgtgagcgat cggtgatgta atcttccggg aagtgatggg
    23341 tcgcttcagg cagatgctta cgcacgattg ctgcgatagt gtcgacattc agcccggttt
    23401 cagcagagat cggcacgata tcgaggaagt tcatctgact tgccaggaac tgtaagtgcg
    23461 gcagcagatc ggctttttcc tgcacgttat ccactttgtt caccgcgagg atcaccggcg
    23521 ctttgccatc gcgcagtttg ttgagcacca tttcgtcgtc cggcgtccag cgggtgcctt
    23581 caacgacaaa aatcaccagc tcaacgtcgc caatagagct gctcgccgct ttgttcatca
    23641 ggcggttaat agcgcgtttt tcttccatat gcaggccagg ggtatcaacg tagatcgcct
    23701 gatacgcgcc ttcagtatgg atccccacaa tgcggtgacg agttgtttgc gctttgcggg
    23761 aggtgatgga gatcttctgc cccagcagtt tgttcaacaa tgtggatttg ccaacgttcg
    23821 gacgtccgac gatggcaata aatccgcagt aacttttatc gatgctcatt ccagctccag
    23881 ttttttcaac gcctgttcgg cggcagcctg ctcagcctta cgacggcttg aacctgtgcc
    23941 aaccaccggt tcactcaggc cgctgacctg gcagtggata gtaaattcct gatcgtgcgc
    24001 ttcgccacgt acctggacta ccagataagt cggcagcggc agatggcgac cctgcaaata
    24061 ttcttgcaag cgcgttttcg gatctttttg tttatcgcct gggctaattt cgtccaaacg
    24121 agtttgatac cagttgagga ttaatttctc gacggtttga atatcactgt cgaggaatac
    24181 gccaccaatt aatgcttcga cggtatcggc gagaattgac tcacgacgaa atccaccgct
    24241 tttaagttca ccaggcccta aacgtaagca ctcgcctaac tcaaattcgc gcgccagttc
    24301 cgccagcgta ttgccacgga ccagcgtggc gcgcatccgg ctcatatcgc cttcatccac
    24361 acgagggaaa cggtgataaa gcgcattggc gataacgtag ctcagaatag agtcgcctaa
    24421 aaattctaaa cgctcgttat gtttgctgct ggcactacga tgagttaatg cctgctgcaa
    24481 cagttcctga tgattaaaag tgtagcccag cttccgttga agccgattaa ttacgatggg
    24541 gttcatgcga taccaataaa taaatgcgtc aacaattcag cacacgaaac agacctgata
    24601 tacatggctc tgctaactgc ttcgctgcag tttcagttta ccggtatatg gggaccaacg
    24661 ctgtttcgtg tgccgtggca acctggaggt gccaacctta aacttcgggg gaatattcta
    24721 tacacaacga cgggggatgt cgttagccac gggagattta tctcataaat aattcacgtt
    24781 gtcgccataa cggcgacaac gtgaacgaag atgggctatt aatggatgcc gccaatgcga
    24841 cttaagcgca cacctgtcgg ccattcgcct tcttgcttat cgaaactcat ccagatagcc
    24901 gttgcccgac cgaccagatt cgcttcaggc acaaaacccc agtaacggct gtccgcgctg
    24961 ttgtcgcggt tgtcgcccat catgaagtat tgtcccggcg gaacaatcca ggttgccagt
    25021 tgttgccctg gctgctggta atacatcccc acctggtcct gcgcaatcgg cactgtcaga
    25081 attcggtgcg tcacatcacc cagtgtctct ttacgctcgg aaagacgaat tccattttct
    25141 ttggtttcgt ttttcggcac ttcaaagaat ccgctggtcg cttccccacc attacggcgt
    25201 gagaaggtct gaacgaaatc gctcggttcc acgttggagt aggtgaccgg tagcgcgttt
    25261 tcacacgcct ggccggaact gcatcccggt tgaatcgtca gctcttttga gaccggatcg
    25321 taagtgactt tatcgcccgg taaacccacc gcgcgcttga tgtaatcaag ctttggatct
    25381 tccggatatt taaagaccac gatatcgccg cgtttcggat gaccggtttc gatcagcgtt
    25441 ttctggtaga taggatcttt aatgccataa gcaaacttct ctaccagaat aaaatcaccg
    25501 attaacagag tcggcatcat cgaacctgac gggatctgga acggttcata aataaacgaa
    25561 cgtacaatca atacgatagc cagcaccgga aaaacagaag caccggtttc cagccagcca
    25621 ggcttcggcg caaccttttt cagggttgct ttatccagtg agtcaccggc agccgcctgc
    25681 gccgctgcct gacgttcccg ccgtttaggt gcgaaaaaga atttatccac gcaccataaa
    25741 atgcccgtca ccagtgtggc aatcaccaga atcagggcaa acatattcgc catgccaact
    25801 cctaagggtt atttgttgtc tttgccgacg tgcagaatgg cgaggaacgc ttcctgcggc
    25861 agctcgacgt taccgatctg cttcatgcgt ttcttacctt ctttctgctt ctgcagcagc
    25921 tttttcttac ggctgatatc gccgccataa catttagcca gtacgttttt acgcagctgt
    25981 ttcacggtgg atcgcgcaat aatgtgcgta ccaatcgctg cctgaatggc gatatcaaac
    26041 tgctggcgtg ggatcagatc tttcatcttc tccaccaact cgcgaccgcg gttttgcgaa
    26101 ttatcacggt gggtgatcag cgccaacgca tcaacacgtt caccgttgat taatacgtct
    26161 acacgtacca tgtcggacgc ctggaagcgt ttgaagttgt aatccagaga cgcataacca
    26221 cgcgaggtag atttcaggcg atcgaagaag tcgagcacca cttccgccat cgggatctcg
    26281 tacgtcagcg ccacctgatt accgtggtaa accatattgg tctgcacgcc gcgtttttct
    26341 acgcacagcg taataacgtt gccgagatat gcctgcggca gcagcatgtg acactctgca
    26401 atcggctcgc gcagttcgta aatgttattt accgcaggca gcttggatgg gctgtcgacg
    26461 tagataactt cccttgacgt ggtttcaact tcatacacta cggtcggcgc agtggtgatc
    26521 agatccagat cgtattcacg ttccagacgt tcctggatga tctccatgtg cagcaggcca
    26581 aggaagccgc agcggaaacc aaagcccagc gcgctggagc tttccggctc atagaacagt
    26641 gaggcatcat tcaggctgag tttacccagc gcgtcacgga aggcttcata gtcgtcggaa
    26701 cttaccggga acagaccggc gtatacctgc ggtttgactt tcttaaagcc aggcagcgcc
    26761 ttttctgccg gattacgcgc cagcgttaag gtatcgccga ctggagcgcc gtggatatct
    26821 ttaatcgcac ataccagcca gcctacttcg ccacatttca gttcagtgcg gtcaacctgt
    26881 ttcggcgtga agatgcccag acggtcggcg ttataggtct gcccggtact catgactttc
    26941 actttgtcgc ccttacgcag ggtgccgttt ttaatacgga taagtgaaac aacgcccaag
    27001 tagttgtcga accatgagtc gataattagt gcctgcaacg ggccttccgg atcgccttcc
    27061 ggcggcggaa tgtcgcgcac cagacgttcg agaacgtcct gcacgccaac gccggttttc
    27121 gctgaacagc gcaccgcgtc agtggcgtcg atgccgacga tatcttcaat ttcttccgcc
    27181 acgcgttcag gatcggctgc cggcaggtca atcttgttca gtactggcac cacttcgaga
    27241 tccatttcca tggcggtgta gcagtttgcc agggtttgcg cttccacgcc ctgcccggcg
    27301 tcgaccacca gcaatgcacc ttcacaggca gccagcgaac gggaaacttc ataggagaag
    27361 tctacgtggc ccggggtgtc gataaagtta agctgatagg tttcgccgtc agacgctttg
    27421 tagtccagcg tcacgctttg cgctttgatg gtaatgccac gctcacgctc aagatccatg
    27481 gaatcgagaa cctgcgcctc catttcacgg tcagacaggc caccgcagat ctggataata
    27541 cggtcagaca gcgtcgattt accgtggtca atgtgagcta tgatcgaaaa gttacgtata
    27601 ttcttcataa agtatgatta ttgtgcctta atgcccggtt aaccaggctt ttagaagtcg
    27661 ctgttctgag cttaacgtct gtattaatag aaacgccgca ttctacacta caacattgag
    27721 gcgaggaaat gttcataccg tatggattgt ggtatctgga aacgtcctcg catttgttat
    27781 gcaaaatgca acaaagccag tgaaatcact ggctcgcgtc ttccgaagat gtttcaaatc
    27841 gcacaaggcc aggcggcaat gccacgctta agatgatcgg ttgccattct gcccgggcag
    27901 caaacttacg cgagtagccg cgcgcaatca ggaacccgcc aataccgccg aggaccgcac
    27961 cacataatgc tgcgacgtca gaagcaaaga gtagctgaaa tagcgaagcg atgaggaata
    28021 atcccaccag cggcgacata taaaccagta atgcggagct aagcaggctg ccttcggcga
    28081 tccccaattc cactttttgc cccggcacta acggttcatc acagggtacg acaatggtat
    28141 gcgtggtttg cgggccaagt ttattcaaca cgcggctacc gcaaccggcg cgtgaagcgc
    28201 agctgctgca tgaagcttta acatcacaac tgaccagcgc ctgcccgttt tgccaggaga
    28261 cgacggtagc ccactctttg atcattgcgc tgccccgaac ttaatattct cggcaatgcg
    28321 tttcgccgtt tgcggcggca gttcaccgac aatggtgatt tcggcgttat cacgtacgct
    28381 tgtactgacg gttctgcgtc cggtgcgcaa catctgatcg gtgctcgatg gcgtagcgcg
    28441 gttaacgttt accgagaagc tgaataatcc gtcagaatag agacgtgatt cgataggcat
    28501 gttgtccatc gtcggtagcg gacgtcgact actggaaact tcgctaaaac cctgtggcaa
    28561 ccaggttggc gtccagctga atttagcttt ttcacctaca ggaacagaaa gcaacggcgg
    28621 caaatttgcc ttcgccagcg tctgcatact gctgctgata tcctgattga cgttaaaagc
    28681 aatcacgcga aattgttcca gcgtttcacc atcgcgatca aggagatcaa cccgcatcgg
    28741 taatttcgat tcggtgtcca tccacacgat gtagctgtag cgtgtaccat ctcgggcaac
    28801 cacgcgaatg acttcgcaaa gacgatcagc aatacgcgtg cgcccgacgg agataaagtc
    28861 gtagtaagga gaaaggcgtt tgaaatcggt atagatgagc gatggcagag aatcaacaat
    28921 gtaatcgcca ttaagcgtga acggttcaag tcccggttca aaatagctga tttcatcgcc
    28981 gcgctgtacc acttcccggc gcgggccatc catttgcaac aattgtgcaa gaggacggtt
    29041 atcgaggcgt gcatgtcgat aacgcagaga ctcaacaccc tgtttattga tgctgatgaa
    29101 tgacagctcg taattcagtg actgactggc caggttcatc tgctgtaata acgccccgga
    29161 cgcgggagtg gccgaggcgt tagcagagaa taacaggcta cctgtcacta atgacatggc
    29221 aaaccaaagt tgcttcatta ctgcgattgc gttcctaaag tttgaattcc tggcacctgt
    29281 acagcggctt gctgggtttg cgcctgctca aactgaagct gttcagagtg gagtcggcgt
    29341 tgcagttcgt aatcctgcaa cattgcatta atgcgacgac gctgctcctg tacctgctgc
    29401 tgttgaccat tgtttgcggt cgcttcagaa ggtactccca ggcttaccgg gctggcttta
    29461 cccatcatcg gcagtgtatt aaataccggc gtttcgggct gctgggacgt ttcagattgt
    29521 ccattatagt gctggacgcc aacgataact gcaagcgata cgcatgctgc tacgcccatt
    29581 tgggtaagct gtgccgccca cggacgtact ttctgccaga atggcatttt ctgccattga
    29641 tgcggcgcag gctgggcttc cgggatcaat gtcgccggtt gacgtactgg ctcttcttca
    29701 atggcggcca tcacgcgtga agagatatcg aaatggagca cctcgggagt atcaccccgc
    29761 attgagtcac ggattaagtg atagctttcc caggttttct gcatttctgg gttatgagcc
    29821 agttcgttaa gcagctcact atccagcgtt tcgccatcca ttaaagcgga aagttgttct
    29881 ttctgcatgc ctaataccct tatccagtat cccgctatcg tcaacgcctg ataagcggtt
    29941 gaactttgtt atcaatagct tccctcgctc ggaagatacg tgaacgcacc gtacctaccg
    30001 gacaatccat gatagcggct atctcttcat agctcaggcc atccagctcc cgcaaggtta
    30061 ttgccatgcg caaatcttcc gggagggact caatagttcg gaaaactatc tgtctcagtt
    30121 cttctgacaa cattaagttc tcagggttcg aaatttcttt caacgcgccg ccactttcga
    30181 agttttcagc ttcaatggca tccacatcac tggaaggtgg acgacgcccc tgagcaacca
    30241 ggtaattttt cgctgtattt acagcaatcc gatacagcca tgtataaaaa gcgctatctc
    30301 cccggaacga atccagcgca cgataggctt taataaaagc ttcttgtacc acatcgggaa
    30361 catcacccga cggcacatag cgggaaacca gactcgccac tttatgctga tagcgcacta
    30421 ccagtaagtt aaaggctttc tgatctccct tctggacccg ttcaaccagg acctggtccg
    30481 ttaactgctc gctcatccga ggtaaagtct ccccaaacca aatttccacg cgctatcgaa
    30541 acgccactcc attagctgca atttgagcaa gcaaagggtt agagtgtctc gtttttgtaa
    30601 agttccgtaa cgcatctgtt tttgtttgtc atgctgtaga cggatcatta tctatcatta
    30661 taagtctaca gaatctgaac atcgcattat ctgtgtagaa atgcccattt aactgcctga
    30721 agagtaaccc aacggccttt ttatttcacc acctaatcct ccaccagcca gtaacttctc
    30781 tttttctcgc cgccctgcat cagcgtgttt agcaactgta acaaatatta aaatagcagg
    30841 tgtttattcg cacaacatga tgctatactg accaaaccgt gtttagtaaa ttaaacaaag
    30901 aaaatgaata ctctccctga acattcatgt gacgtgttga ttattggtag cggcgcagcc
    30961 ggactttcac tggcgctacg cctggctgac cagcatcagg tcatcgttct aagtaaaggc
    31021 ccggtaacgg aaggttcaac attttatgcc cagggcggta ttgccgccgt gtttgatgaa
    31081 actgacagca ttgactcgca tgtggaagac acattgattg ccggggctgg tatttgcgat
    31141 cgccatgcag ttgaatttgt cgccagcaat gctcgttcct gtgtgcaatg gttaattgac
    31201 cagggggttt tgtttgatac ccacgttcaa ccgaatggcg aagaaagcta ccatctgacc
    31261 cgtgaaggag gacatagtca ccgtcgtatt cttcatgccg ccgacgccac cggtagagaa
    31321 gtacaatcca cgctggtgag caaggcgcag aaccatccga atattcgtgt gctggagcgc
    31381 agcaacgcag ttgatctgat tgtctctgac aaaattggcc tgccgggcac gcgac
//
LOCUS       DADMIB010000031        30959 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.031, whole genome shotgun sequence.
ACCESSION   DADMIB010000031 DADMIB010000000
VERSION     DADMIB010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30959)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30959)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30959
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.031"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            248..631
                     /gene="secE"
                     /locus_tag="JNZ89_001353"
     CDS             248..631
                     /gene="secE"
                     /locus_tag="JNZ89_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HAY8935282.1"
                     /translation="MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLR
                     ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
                     VMSLILWGLDGILVRLVSFITGLRF"
     gene            633..1178
                     /gene="nusG"
                     /locus_tag="JNZ89_001354"
     CDS             633..1178
                     /gene="nusG"
                     /locus_tag="JNZ89_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005280494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HAY8935283.1"
                     /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMV
                     PTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
                     ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
                     SVSIFGRATPVELDFSQVEKA"
     gene            1338..1766
                     /gene="rplK"
                     /locus_tag="JNZ89_001355"
     CDS             1338..1766
                     /gene="rplK"
                     /locus_tag="JNZ89_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HAY8935284.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGAGKPNKDKVGKIS
                     RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
     gene            1770..2474
                     /gene="rplA"
                     /locus_tag="JNZ89_001356"
     CDS             1770..2474
                     /gene="rplA"
                     /locus_tag="JNZ89_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HAY8935285.1"
                     /translation="MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDV
                     AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAD
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTM
                     GAGVAVDQAGLSASVN"
     gene            2887..3384
                     /gene="rplJ"
                     /locus_tag="JNZ89_001357"
     CDS             2887..3384
                     /gene="rplJ"
                     /locus_tag="JNZ89_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HAY8935286.1"
                     /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
                     GREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKA
                     NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
                     AKEAA"
     gene            3451..3816
                     /gene="rplL"
                     /locus_tag="JNZ89_001358"
     CDS             3451..3816
                     /gene="rplL"
                     /locus_tag="JNZ89_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HAY8935287.1"
                     /translation="MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAG
                     PVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKD
                     DAEALKKALEEAGAEVEVK"
     gene            4136..8164
                     /gene="rpoB"
                     /locus_tag="JNZ89_001359"
     CDS             4136..8164
                     /gene="rpoB"
                     /locus_tag="JNZ89_001359"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HAY8935288.1"
                     /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
                     GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
                     VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
                     QILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
                     LEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIE
                     TLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
                     DRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
                     RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
                     PNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLD
                     EEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDE
                     MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
                     NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
                     VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
                     SRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
                     AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
                     ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
                     RAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
                     PTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
                     AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
                     ESFNVLLKEIRSLGINIELEDE"
     gene            8241..12464
                     /gene="rpoC"
                     /locus_tag="JNZ89_001360"
     CDS             8241..12464
                     /gene="rpoC"
                     /locus_tag="JNZ89_001360"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HAY8935289.1"
                     /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
                     GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQIL
                     TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLT
                     KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
                     TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAK
                     TSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQI
                     MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
                     IDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
                     LVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
                     IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
                     LVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITE
                     VSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDV
                     LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
                     ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
                     ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
                     KATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEA
                     PAAPQVTAEDASASLAELLNAGLGGSDNE"
     gene            12677..13216
                     /locus_tag="JNZ89_001361"
     CDS             12677..13216
                     /locus_tag="JNZ89_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-shock protein C"
                     /protein_id="HAY8935290.1"
                     /translation="MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYR
                     FWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPES
                     NVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVK
                     FFTIAYNLLRNKQLPQPSK"
     gene            complement(13626..14759)
                     /gene="thiH"
                     /locus_tag="JNZ89_001362"
     CDS             complement(13626..14759)
                     /gene="thiH"
                     /locus_tag="JNZ89_001362"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HAY8935291.1"
                     /translation="MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMA
                     LLSPAASGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
                     KTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
                     PLAKTEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGID
                     KIGLGALIGLSDNWRVDCYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMD
                     ERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHP
                     ELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRASQRL"
     gene            complement(14756..15601)
                     /gene="thiG"
                     /locus_tag="JNZ89_001363"
     CDS             complement(14756..15601)
                     /gene="thiG"
                     /locus_tag="JNZ89_001363"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HAY8935292.1"
                     /translation="MSSGRNISCRMATRSCFFRLLQGVEMLRIADKTFDSHLFTGTGK
                     FASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEE
                     AIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPV
                     LCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQA
                     LEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSHFAHATSPLTGF
                     LEASA"
     gene            complement(15528..15728)
                     /gene="thiS"
                     /locus_tag="JNZ89_001364"
     CDS             complement(15528..15728)
                     /gene="thiS"
                     /locus_tag="JNZ89_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HAY8935293.1"
                     /translation="MQILFNDQPMQCATGQTVHELLEQLDQRQAGAALAINQQIVPRE
                     QWTQHIVQDGDQILLFQVIAGG"
     gene            complement(15712..16467)
                     /gene="thiF"
                     /locus_tag="JNZ89_001365"
                     /pseudo
     CDS             complement(15712..16467)
                     /gene="thiF"
                     /locus_tag="JNZ89_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709786.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole biosynthesis adenylyltransferase ThiF"
     gene            complement(16460..17095)
                     /gene="thiE"
                     /locus_tag="JNZ89_001366"
     CDS             complement(16460..17095)
                     /gene="thiE"
                     /locus_tag="JNZ89_001366"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709787.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HAY8935294.1"
                     /translation="MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRR
                     DEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAG
                     LRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYP
                     TVAIGGISLARAPAVIATGVGSIAVISAITQAADWRLATAQLLEIAGVGDE"
     gene            complement(17095..18990)
                     /gene="thiC"
                     /locus_tag="JNZ89_001367"
     CDS             complement(17095..18990)
                     /gene="thiC"
                     /locus_tag="JNZ89_001367"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HAY8935295.1"
                     /translation="MSATKLTRREQRARAQHFIDTLEGTAFPNSKRIYLTGTHSGVRV
                     PMREIQLSPTLIGGSKEQPQFEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWID
                     ARGDTEELTVRSSDYTKARLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITP
                     EMEFIAIRENMGRERIRSEVLRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANI
                     NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYI
                     HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
                     GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSL
                     GDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEE
                     LEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKE
                     DVKQGLITYKIAAHAADLAKGHPGAQIRDNSMSKARFEFRWEDQFNLALDPFTARAYH
                     DETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQTIEMGMADMSENFRARGGEI
                     YLRKEEA"
     regulatory      complement(19071..19171)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(19224..19700)
                     /gene="rsd"
                     /locus_tag="JNZ89_001368"
     CDS             complement(19224..19700)
                     /gene="rsd"
                     /locus_tag="JNZ89_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma D regulator"
                     /protein_id="HAY8935296.1"
                     /translation="MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKE
                     SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQ
                     IMDYYDSSLETAIDHDNYLEFQKVLSDIGEALEARFVLEDKLILLVLDAARVKHPA"
     gene            19795..20568
                     /gene="nudC"
                     /locus_tag="JNZ89_001369"
     CDS             19795..20568
                     /gene="nudC"
                     /locus_tag="JNZ89_001369"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HAY8935297.1"
                     /translation="MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRAL
                     QIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVVLFQLAGRGVQLAEFYRSHKYCGYCG
                     HEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGF
                     VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK
                     ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE"
     gene            20608..21672
                     /gene="hemE"
                     /locus_tag="JNZ89_001370"
     CDS             20608..21672
                     /gene="hemE"
                     /locus_tag="JNZ89_001370"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HAY8935298.1"
                     /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKVTRAQAG
                     DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSP
                     VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRD
                     YQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
                     DARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVP
                     PEHAGVFVEAVHRLSEQYHR"
     gene            21682..22353
                     /gene="nfi"
                     /locus_tag="JNZ89_001371"
     CDS             21682..22353
                     /gene="nfi"
                     /locus_tag="JNZ89_001371"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HAY8935299.1"
                     /translation="MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEV
                     TRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFV
                     DGHGISHPRRLGVASHFGLMVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLA
                     WVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRY
                     TANQP"
     gene            22396..22986
                     /locus_tag="JNZ89_001372"
     CDS             22396..22986
                     /locus_tag="JNZ89_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjaG family protein"
                     /protein_id="HAY8935300.1"
                     /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGD
                     GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVVLSE
                     LVHSRLSGETLEHAVEVSKTSITTVAMLEMTQVGREMSDEELKENPAVEQEWDIQWEI
                     FRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ"
     gene            23173..23445
                     /gene="hupA"
                     /locus_tag="JNZ89_001373"
     CDS             23173..23445
                     /gene="hupA"
                     /locus_tag="JNZ89_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-alpha"
                     /protein_id="HAY8935301.1"
                     /translation="MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQL
                     VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
     gene            23458..24153
                     /locus_tag="JNZ89_001374"
     CDS             23458..24153
                     /locus_tag="JNZ89_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1481 domain-containing protein"
                     /protein_id="HAY8935302.1"
                     /translation="MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASG
                     FAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPV
                     NIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQG
                     RWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVAN
                     SDFCRWQPNEKTF"
     gene            complement(24155..24580)
                     /gene="zraP"
                     /locus_tag="JNZ89_001375"
     CDS             complement(24155..24580)
                     /gene="zraP"
                     /locus_tag="JNZ89_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc resistance sensor/chaperone ZraP"
                     /protein_id="HAY8935303.1"
                     /translation="MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQ
                     QTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLD
                     ELRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW"
     gene            24818..26194
                     /gene="zraS"
                     /locus_tag="JNZ89_001376"
     CDS             24818..26194
                     /gene="zraS"
                     /locus_tag="JNZ89_001376"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     ZraS"
                     /protein_id="HAY8935304.1"
                     /translation="MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAA
                     ARQTLLEKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTI
                     VMHSNSGMVGKQLYSPQEMQQLHPGDEEAWRRIDSADGEPVLEIYRQFQPMFAAGMHR
                     MRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFALATVLLASVLSFFWYRRY
                     LRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQL
                     AQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRF
                     TANDTLPEIQADPDRLTQVLLNLYLNAIQAIVQHGVISVTVSESGAGVKISVTDSGKG
                     IAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVN
                     ITRKDPQG"
     gene            26191..27515
                     /gene="zraR"
                     /locus_tag="JNZ89_001377"
                     /pseudo
     CDS             26191..27515
                     /gene="zraR"
                     /locus_tag="JNZ89_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418432.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent response regulator
                     transcription factor ZraR"
     gene            complement(27512..28801)
                     /gene="purD"
                     /locus_tag="JNZ89_001378"
     CDS             complement(27512..28801)
                     /gene="purD"
                     /locus_tag="JNZ89_001378"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HAY8935305.1"
                     /translation="MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQ
                     NVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLE
                     GSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
                     LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRV
                     GDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMI
                     DKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACESKLDEKTSEWDERASLGV
                     VMAAGGYPGDYRTGDVIHGLLLEEVAGGKVFHAGTKLADDEQVVTNGGRVLCVTALGH
                     TVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN"
     gene            complement(28813..30402)
                     /gene="purH"
                     /locus_tag="JNZ89_001379"
     CDS             complement(28813..30402)
                     /gene="purH"
                     /locus_tag="JNZ89_001379"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HAY8935306.1"
                     /translation="MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLL
                     AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVV
                     VNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEM
                     DDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
                     NFIKKQDMRYGENSHQQAAFYIEENVKEASVATATQVQGKALSYNNIADTDAALECVK
                     EFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
                     ISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRD
                     LGMVGAEELRVVTQRQPTEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSR
                     VYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEV
                     IAAADEHGIAMLFTDMRHFRH"
BASE COUNT         7346 a         7989 c         8435 g         7189 t
ORIGIN      
        1 gcaaaagttc tgagctaatt gccgataaca tttgactcaa tgcgcactaa aagggcatca
       61 tttgatgccc tttttgcacg ctttcgtacc agaacctggc tcatcagtga ttttctttgt
      121 cataatcatt gctgagacag gctctgttga gggcgtataa tccgaaaagc taatacgcgt
      181 ttcgatttgg tttgcctcgc gatcgcgggg tgaaaatgtt tgtagaaaac ttctgacagg
      241 ttggtttatg agtgcgaata ccgaagctca aggaagcggg cgcggcctgg aagcgatgaa
      301 gtgggtcgtt gtggtggcat tgctcttggt ggcgattgtc ggcaactacc tttatcgcga
      361 cattatgctg ccgctgcgtg cgctggccgt agtaattctg attgctgcag cgggtggtgt
      421 cgcgctgtta acgacaaaag gtaaagctac cgttgctttt gcccgtgaag cgcgtaccga
      481 agtccgtaag gtcatttggc cgactcgcca ggaaacattg cacaccacgc tgattgtggc
      541 tgcggttacc gcagtaatgt cactgatcct gtggggactg gatggtattc tggttcgcct
      601 ggtatccttt atcactggcc tgaggttctg agatgtctga agctcctaaa aagcgctggt
      661 acgtcgttca ggcgttttcc ggttttgaag gccgcgtagc aacgtcgctg cgtgagcata
      721 tcaaattaca caacatggaa gatttgtttg gtgaagtcat ggtaccaacc gaagaagtgg
      781 ttgaaatccg tggcggtcag cgtcgcaaaa gcgaacgtaa attcttccct ggctacgtcc
      841 tcgttcagat ggtgatgaac gacgcgagct ggcacctggt gcgcagcgta ccgcgagtga
      901 tgggcttcat cggcggtact tccgatcgtc ctgcgccaat cagcgataaa gaagtcgatg
      961 cgattatgaa ccgcctgcag caggttggtg ataagccgcg tccgaaaacg ctgtttgaac
     1021 cgggtgaaat ggtccgtgtt aatgatggtc cgttcgctga cttcaacggt gttgttgaag
     1081 aagtggatta cgagaaatct cgtctgaaag tgtctgtttc tatcttcggt cgtgcgaccc
     1141 cggtagagct ggacttcagc caggttgaaa aagcctaacc cagcgatcaa aaaagcggcg
     1201 atttaatcgt tgcacaaggc gcgagattgg aatacaattt cgcgcctttt atttttatgg
     1261 gccttgcccg taaaaacgat tttttatatc acggggagcc tctcagaggc gttattaccc
     1321 aacttgagga atttataatg gctaagaaag tacaagccta tgtcaagctg caggttgcag
     1381 ctggtatggc taacccgagt ccgccagtag gtccggctct gggtcagcag ggcgtaaaca
     1441 tcatggaatt ctgcaaagcg ttcaacgcaa aaactgattc catcgaaaaa ggtctgccga
     1501 ttccggtagt aatcaccgtt tacgctgacc gttctttcac tttcgttacc aagaccccgc
     1561 cggcagcagt tctgctgaaa aaagcggctg gtatcaagtc tggtgccggt aagccgaaca
     1621 aagacaaagt gggtaaaatt tcccgcgctc agctgcagga aatcgcgcag accaaagctg
     1681 ccgacatgac tggtgccgac attgaagcga tgactcgctc catcgaaggt actgcacgtt
     1741 ccatgggcct ggtagtggag gactaagaaa tggctaaact gaccaagcgc atgcgtgtta
     1801 tccgcgagaa agttgatgca accaaacagt acgacatcaa cgaagctatc gcactgctga
     1861 aagagctggc gactgctaaa ttcgtagaaa gcgtggacgt agctgttaac ctcggcatcg
     1921 acgctcgtaa atctgaccag aacgtacgtg gtgcaactgt actgccgcac ggtactggcc
     1981 gttccgttcg cgtagccgta tttacccaag gtgcaaacgc tgaagctgct aaagctgcag
     2041 gcgcagaact ggtaggtatg gaagatctgg ctgaccagat caagaaaggc gaaatgaact
     2101 ttgacgttgt tattgcttct ccggatgcaa tgcgcgttgt tggccagctg ggccaggttc
     2161 tgggtccgcg cggcctgatg ccaaacccga aagtgggtac tgtaacaccg aacgttgctg
     2221 aagcggttaa aaacgctaaa gctggccagg ttcgttaccg taacgacaaa aacggcatca
     2281 tccacaccac catcggtaaa gtggactttg acgctgacaa actgaaagaa aacctggaag
     2341 ctctgctggt tgcgctgaaa aaagcaaaac cgactcaggc gaaaggcgtg tacatcaaga
     2401 aagttagcat ctccaccacc atgggtgcag gtgttgcagt tgaccaggct ggcctgagcg
     2461 cttctgtaaa ctaatgcctt tacgtgggcg gtgattttgt ctacaatctt acccccacgt
     2521 ataatgctta atgcagacgt atatccgaga tattcgggtt gtggcaaggc ggcaactgag
     2581 tgagtcgcca agagcatagc taactatgtg actggtgcga atgaaggaag ccaacgccgc
     2641 cacaagttga atagcgacgg atagaaaaga tttgttcgtt ggagcttggc ctatccaggc
     2701 ctccgtcgaa gaccgcagga gtttcgcaag aaacttaatc ccctgcgtag acggtgacag
     2761 aacgctaaga ttattctttt atattctggc ttgtttctgc tcaccgtaat taagacgctc
     2821 tctccgtttg gaggagtgaa gtgagttcca gagattttct ctggcaaaca tccaggagca
     2881 aagctaatgg ctttaaatct tcaagacaaa caagcgattg ttgctgaagt cagcgaagta
     2941 gccaaaggcg cgctgtctgc agtagttgcg gattcccgtg gcgtaactgt agataaaatg
     3001 actgaactgc gtaaagcagg tcgcgaagct ggcgtataca tgcgtgttgt tcgtaacacc
     3061 ctgctgcgcc gtgctgttga aggtactccg ttcgagtgcc tgaaagacgc gtttgttggt
     3121 ccgaccctga ttgcatactc tatggaacac ccgggcgctg ctgctcgtct gttcaaagag
     3181 ttcgcgaaag cgaatgcaaa atttgaggtc aaagccgctg cctttgaagg tgagctgatc
     3241 ccggcgtctc agatcgaccg cctggcaact ctgccgacct acgaagaagc aattgcacgc
     3301 ctgatggcaa ccatgaaaga agcttcggct ggcaaactgg ttcgtactct ggctgctgta
     3361 cgcgatgcga aagaagctgc ttaatcgcag ttatcttttt aacgcattcg cttacgtata
     3421 aacttattct gatattcagg aacaatttaa atgtctatca ctaaagatca aatcattgaa
     3481 gcagttgcag ctatgtctgt aatggacgtt gtagaactga tctctgcaat ggaagaaaaa
     3541 ttcggtgttt ccgctgctgc tgctgtagct gtagctgctg gcccggttga agctgctgaa
     3601 gaaaaaactg aattcgacgt aattctgaaa gctgctggcg ctaacaaagt tgctgttatc
     3661 aaagcagtac gtggcgcaac tggcctgggt ctgaaagaag ctaaagacct ggtagaatct
     3721 gcaccggctg ctctgaaaga aggcgtgagc aaagacgacg cagaagcact gaaaaaagct
     3781 ctggaagaag ctggcgctga agttgaagtt aaataagcca acccttccgg ttgcagcctg
     3841 agaaatcagg ctgatggctg gtgacttttt agtcaccagc ctttttgcgc tgtaaggcgc
     3901 cagtagcgtt tcacactgtt tgactactgc tgtgcctttc aatgcttgtt tctatcgacg
     3961 acttaatata ctgcgacagg acgtccgttc tgtgtaaatc gcaatgaaat ggtttaagcg
     4021 tgatagcaac aggcattgcg gaaagtgttc cattttccgg tcaacaaaat agtgttgcac
     4081 aaactgtccg ctcaatggac agatgggtcg acttgtcagc gagctgagga accctatggt
     4141 ttactcctat accgagaaaa aacgtattcg taaggatttt ggtaaacgtc cacaagttct
     4201 ggatgtacct tatctccttt ctatccagct tgactcgttt cagaaattta tcgagcaaga
     4261 tcctgaaggg cagtatggtc tggaagcagc tttccgttcc gtattcccga ttcagagcta
     4321 cagcggtaat tccgagctgc aatacgtcag ctaccgcctt ggcgaaccgg tgtttgacgt
     4381 ccaggaatgt caaatccgtg gcgtgaccta ttccgcaccg ctgcgcgtta aactgcgtct
     4441 ggtgatctat gagcgcgaag cgccggaagg caccgtaaaa gacattaaag aacaagaagt
     4501 ctacatgggc gaaattccgc tcatgacaga caacggtacc tttgttatca acggtactga
     4561 gcgtgttatc gtttcccagc tgcaccgtag tccgggcgtc ttctttgact ccgacaaagg
     4621 taaaacccac tcttcgggta aagtgctgta taacgcgcgc atcatccctt accgtggttc
     4681 ctggctggac ttcgaattcg atccgaagga caacctgttc gtacgtatcg accgtcgccg
     4741 taaactgcct gcgaccatca ttctgcgcgc cctgaactac accacagagc agatcctcga
     4801 cctgttcttt gaaaaagtta tctttgaaat ccgtgataac aagctgcaga tggaactggt
     4861 gccggaacgc ctgcgtggtg aaaccgcatc ttttgacatc gaagctaacg gtaaagtgta
     4921 cgtagaaaaa ggccgccgta tcactgcgcg ccacattcgc cagctggaaa aagacgacgt
     4981 caaacttatc gaagtcccgg ttgagtacat cgcaggtaaa gtggttgcta aagactatat
     5041 tgatgagtct accggcgagc tgatctgcgc agcgaacatg gagctgagcc tggatctgct
     5101 ggctaagctg agccagtctg gtcacaagcg tatcgaaacg ctgttcacca acgatctgga
     5161 tcacggccca tatatctctg aaaccttacg tgtcgaccca actaacgacc gtctgagcgc
     5221 actggtagaa atctaccgca tgatgcgccc tggcgagccg ccgactcgtg aagcagctga
     5281 aagcctgttc gagaacctgt tcttctccga agaccgttat gacttgtctg cggttggtcg
     5341 tatgaagttc aaccgttctc tgctgcgcga agaaatcgaa ggttccggta tcctgagcaa
     5401 agacgacatc attgatgtta tgaaaaagct catcgatatc cgtaacggta aaggcgaagt
     5461 cgatgatatc gaccacctcg gcaaccgtcg tatccgttcc gttggcgaaa tggcggaaaa
     5521 ccagttccgc gttggcttgg tacgtgtaga gcgtgcggtg aaagagcgtc tgtctctggg
     5581 cgatctggat accctgatgc ctcaggatat gatcaacgcc aagccgattt ccgcagcagt
     5641 gaaagagttc ttcggttcca gccagctgtc tcagtttatg gaccagaaca acccgctgtc
     5701 tgagattacg cacaaacgtc gtatctccgc actcggccca ggcggtctga cccgtgaacg
     5761 tgcaggcttc gaagttcgag acgtacaccc gactcactac ggtcgcgtat gtccaatcga
     5821 aacccctgaa ggtccgaaca tcggtctgat caactctctg tccgtgtacg cacagactaa
     5881 cgaatacggc ttccttgaga ctccgtatcg taaagtgacc gacggtgttg taactgacga
     5941 aattcactac ctgtctgcta tcgaagaagg caactacgtt atcgcccagg cgaactccaa
     6001 cctggatgaa gaaggccact tcgtagaaga cctggtaact tgccgtagca aaggcgaatc
     6061 cagcttgttc agccgcgacc aggttgacta catggacgta tccacccagc aggtggtatc
     6121 cgtcggtgcg tccctgatcc cgttcctgga acacgatgac gccaaccgtg cattgatggg
     6181 tgcgaacatg caacgtcagg ccgttccgac tctgcgcgct gataagccgc tggttggtac
     6241 tggtatggaa cgtgctgttg ccgttgactc cggtgtaact gcggtagcta aacgtggtgg
     6301 tgtcgttcag tacgtggatg cttcccgtat cgttatcaaa gttaacgaag acgagatgta
     6361 tccgggtgaa gcaggtatcg acatctacaa cctgaccaaa tacacccgtt ctaaccagaa
     6421 cacctgtatc aaccagatgc cgtgtgtgtc tctgggtgaa ccggttgaac gtggcgacgt
     6481 gctggcagac ggtccgtcca ccgacctcgg tgaactggcg cttggtcaga acatgcgcgt
     6541 agcgttcatg ccgtggaatg gttacaactt cgaagactcc atcctcgtat ccgagcgtgt
     6601 tgttcaggaa gaccgtttca ccaccatcca cattcaggaa ctggcgtgtg tgtcccgtga
     6661 caccaagctg gggccggaag agatcaccgc tgacatcccg aacgtgggtg aagctgcgct
     6721 ctccaaacta gatgaatccg gtatcgttta cattggtgcg gaagtgaccg gtggcgacat
     6781 tctggttggt aaggtaacgc cgaaaggtga aactcagctg accccagaag aaaaactgct
     6841 gcgtgcgatc ttcggtgaga aagcctctga cgttaaagac tcttctctgc gcgtaccaaa
     6901 cggtgtatcc ggtacggtta tcgacgttca ggtctttact cgcgatggcg tagaaaaaga
     6961 caaacgtgcg ctggaaatcg aagaaatgca gctcaaacag gcgaagaaag acctgtctga
     7021 agaactgcag atcctcgaag cgggtctgtt cagccgtatc cgtgctgtgc tggtagccgg
     7081 tggcgttgaa gctgagaagc tcgacaaact gccgcgcgat cgctggctgg agctgggcct
     7141 gacagacgaa gagaaacaaa atcagctgga acagctggct gagcagtatg acgaactgaa
     7201 acacgagttc gagaagaaac tcgaagcgaa acgccgcaaa atcacccagg gcgacgatct
     7261 ggcaccgggc gtgctgaaga ttgttaaggt atatctggcg gttaaacgcc gtatccagcc
     7321 tggtgacaag atggcaggtc gtcacggtaa caagggtgta atttctaaga tcaacccgat
     7381 cgaagatatg ccttacgatg aaaacggtac gccggtagac atcgtactga acccgctggg
     7441 cgtaccgtct cgtatgaaca tcggtcagat cctcgaaacc cacctgggta tggctgcgaa
     7501 aggtatcggc gacaagatca acgccatgct gaaacagcag caagaagtcg cgaaactgcg
     7561 cgaattcatc cagcgtgcgt acgatctggg cgctgacgtt cgtcagaaag ttgacctgag
     7621 taccttcagc gatgaagaag ttatgcgtct ggctgaaaac ctgcgcaaag gtatgccaat
     7681 cgcaacgccg gtgttcgacg gtgcgaaaga agcagaaatt aaagagctgc tgaaacttgg
     7741 cgacctgccg acttccggtc agatccgcct gtacgatggt cgcactggtg aacagttcga
     7801 gcgtccggta accgttggtt acatgtacat gctgaaactg aaccacctgg tcgacgacaa
     7861 gatgcacgcg cgttccaccg gttcttacag cctggttact cagcagccgc tgggtggtaa
     7921 ggcacagttc ggtggtcagc gtttcgggga gatggaagtg tgggcgctgg aagcatacgg
     7981 cgcagcatac accctgcagg aaatgctcac cgttaagtct gatgacgtga acggtcgtac
     8041 caagatgtat aaaaacatcg tggacggcaa ccatcagatg gagccgggca tgccagaatc
     8101 cttcaacgta ttgttgaaag agattcgttc gctgggtatc aacatcgaac tggaagacga
     8161 gtaattctcg ctcaaacagg tcactgctgt cgggttaaaa cccggcagcg gattgtgcta
     8221 actccgacgg gagcaaatcc gtgaaagatt tattaaagtt tctgaaagcg cagactaaaa
     8281 ccgaagagtt tgatgcgatc aaaattgctc tggcttcgcc agacatgatc cgttcatggt
     8341 ctttcggtga agttaaaaag ccggaaacca tcaactaccg tacgttcaaa ccagaacgtg
     8401 acggcctttt ctgcgcccgt atctttgggc cggtaaaaga ttacgagtgc ctgtgcggta
     8461 agtacaagcg cctgaaacac cgtggcgtca tctgtgagaa gtgcggcgtt gaagtgaccc
     8521 agactaaagt acgccgtgag cgtatgggcc acatcgaact ggcttccccg actgcgcaca
     8581 tctggttcct gaaatcgctg ccgtcccgta tcggtctgct gctcgatatg ccgctgcgcg
     8641 atatcgaacg cgtactgtac tttgaatcct atgtggttat cgaaggcggt atgaccaacc
     8701 tggaacgtca gcagatcctg actgaagagc agtatctgga cgcgctggaa gagttcggtg
     8761 acgaattcga cgcgaagatg ggtgcggaag caatccaggc tctgctgaag agcatggatc
     8821 tggagcaaga gtgcgaacag ctgcgcgaag agctgaacga aaccaactcc gaaaccaagc
     8881 gtaaaaagct gaccaagcgt atcaaactgc tggaagcgtt cgttcagtct ggtaacaaac
     8941 cagagtggat gatcctgacc gttctgccgg tactgccgcc agatctgcgt ccgctggttc
     9001 cgctggatgg tggtcgtttc gcgacttctg acctgaacga tctgtatcgt cgcgtcatta
     9061 accgtaacaa ccgtctgaaa cgtctgctgg atctggctgc gccggacatc atcgtacgta
     9121 acgaaaaacg tatgctgcag gaagcggtag acgccctgct ggataacggt cgtcgcggtc
     9181 gtgcgatcac cggttctaac aagcgtcctc tgaaatcttt ggccgacatg atcaaaggta
     9241 aacagggtcg tttccgtcag aacctgctcg gtaagcgtgt tgactactcc ggtcgttctg
     9301 taatcaccgt aggtccatac ctgcgtctgc atcagtgcgg tctgccgaag aaaatggcgc
     9361 tggagctgtt caaaccgttc atctacggca agctggaact gcgtggtctt gctaccacca
     9421 ttaaagctgc gaagaaaatg gttgagcgcg aagaagctgt cgtttgggat atcctggacg
     9481 aagttatccg cgaacacccg gtactgctga accgtgcacc gactctgcac cgtctgggta
     9541 tccaggcatt tgaaccggta ctgatcgaag gtaaagctat ccagctgcac ccgctggttt
     9601 gtgcggcata taacgccgac ttcgatggtg accagatggc tgttcacgta ccgctgacgc
     9661 tggaagccca gctggaagcg cgtgcgctga tgatgtctac caacaacatc ctgtccccgg
     9721 cgaacggcga accaatcatc gttccgtctc aggacgttgt tctgggtctg tactatatga
     9781 cccgtgactg tgttaacgcc aaaggcgaag gcatggtgct gactggcccg aaagaagcag
     9841 aacgtctgta tcgctctggt ctggcttctc tgcatgcgcg cgttaaagtg cgtatcaccg
     9901 agtatgaaaa agatgcaaac ggtgaattag tagcgaaaac cagcctgaaa gacacgactg
     9961 ttggccgtgc cattctgtgg atgattgtac cgaaaggtct gccttactcc atcgtcaacc
    10021 aggcgctggg taaaaaagca atctccaaaa tgctgaacac ctgctaccgc attctcggtc
    10081 tgaaaccgac cgttattttt gcggaccaga tcatgtacac cggcttcgcc tatgcagcgc
    10141 gttctggtgc atctgttggc atcgatgaca tggtcatccc ggagaagaaa cacgaaatca
    10201 tctccgaggc agaagcagaa gttgctgaaa ttcaggagca gttccagtct ggtctggtaa
    10261 ctgcgggcga acgctacaac aaagttatcg atatctgggc tgcggcgaac gatcgtgtat
    10321 ccaaagcgat gatggataac ctgcaaactg aaaccgtgat taaccgtgac ggtcaggaag
    10381 agaagcaggt ttccttcaac agcatctaca tgatggccga ctccggtgcg cgtggttctg
    10441 cggcacagat tcgtcagctt gctggtatgc gtggtctgat ggcgaagccg gatggctcca
    10501 tcatcgaaac gccaatcacc gcgaacttcc gtgaaggtct gaacgtactc cagtacttca
    10561 tctccaccca cggtgctcgt aaaggtctgg cggataccgc actgaaaact gcaaactccg
    10621 gttacctgac tcgtcgtctg gttgacgtgg cgcaggacct ggtggttacc gaagacgatt
    10681 gtggtaccca tgaaggtatc atgatgactc cggttatcga aggtggtgat gttaaagagc
    10741 cgctgcgcga tcgcgtactg ggtcgtgtaa ctgctgaaga cgttctgaag ccgggtactg
    10801 ctgatatcct cgttccgcgc aacacgctgc tgcacgaaca gtggtgtgac ctgctggaag
    10861 agaactctgt cgacgcggtt aaagtacgtt ctgttgtatc ttgtgacacc gactttggtg
    10921 tatgtgcgca ctgctacggt cgtgacctgg cgcgtggcca catcatcaac aagggtgaag
    10981 caatcggtgt tatcgcggca cagtccatcg gtgaaccggg tacacagctg accatgcgta
    11041 cgttccacat cggtggtgcg gcatctcgtg cggctgctga atccagcatc caggtgaaaa
    11101 acaaaggtag catcaagctc agcaacgtga agtcggttgt gaactccagc ggtaaactgg
    11161 ttatcacttc ccgtaatact gaactgaaac tgatcgacga attcggtcgt accaaagaaa
    11221 gctacaaagt accttacggt gcggtactgg cgaaaggcga tggcgaacag gttgctggcg
    11281 gcgaaaccgt tgcaaactgg gacccgcaca ccatgccggt tatcaccgaa gtaagcggtt
    11341 ttgtacgctt tactgacatg atcgacggtc agaccattac tcgtcagaca gacgaattga
    11401 ccggtctgtc ttcgctggtg gttctggatt ccgcagaacg taccgcaggt ggtaaagatc
    11461 tgcgtccggc actgaaaatc gttgatgctc agggtaacga cgttctgatt ccgggtaccg
    11521 atatgcctgc gcagtacttc ctgccgggta aagcgattgt tcagctggaa gatggcgtac
    11581 agatcagctc tggtgacacc ctggcgcgta ttccgcagga atccggcggt accaaggaca
    11641 tcaccggtgg tctgccgcgc gttgcggacc tgttcgaagc acgtcgtccg aaagagccgg
    11701 caatcctggc tgaaatcagc ggtatcgttt ccttcggtaa agaaaccaaa ggtaaacgtc
    11761 gtcttgttat caccccggta gacggtagcg atccgtacga agagatgatt ccgaaatggc
    11821 gtcagctcaa cgtgttcgaa ggtgaacgtg tagaacgtgg tgacgtaatt tccgacggtc
    11881 cggaagcgcc gcacgacatt ctgcgtctgc gtggtgttca tgctgttact cgttacatcg
    11941 ttaacgaagt acaggacgta taccgtctgc agggcgttaa gattaacgat aaacacatcg
    12001 aagttatcgt tcgtcagatg ctgcgtaaag ctaccatcgt taacgcgggc agctccgact
    12061 tcctggaagg cgaacaggtt gaatactctc gcgtcaagat cgcaaaccgc gaactggaag
    12121 cgaacggcaa agtgggtgca acttactccc gcgatctgct gggtatcacc aaagcgtctc
    12181 tggcaaccga gtccttcatc tccgcggcat cgttccagga gaccactcgc gtgctgaccg
    12241 aagcagccgt tgcgggcaaa cgcgacgaac tgcgcggcct gaaagagaac gttatcgtgg
    12301 gtcgtctgat cccggcaggt accggttacg cgtaccacca ggatcgtatg cgtcgccgtg
    12361 ctgcgggtga agctccggct gcaccgcagg tgactgcaga agacgcatct gccagcctgg
    12421 cagaactgct gaacgcaggt ctgggcggtt ctgataacga gtaatcgtta atccgcaaat
    12481 aacgtaaaaa cccgcttcgg cgggtttttt tatgggggga gtttagggaa agagcatttg
    12541 tcagaatatt taaggaattt ctgaatactc ataatcaatg tagagatgac taatatcctg
    12601 aaactgactg aactaattga gtcaaactcg gcaaggattc gatactattc ctgtgtaact
    12661 ttcttaagga acgagaatga aacaggaagt ggaaaagtgg cgaccttttg gacatccgga
    12721 tggtgatatt cgtgatttat catttcttga tgctcatcag gctgtctacg ttcagcatca
    12781 tgagggcaaa gagcctttag agtatcgctt ttgggttacc tactctcttc actgcttcac
    12841 aaaagattat gaacatcaga cgaacgaaga aaaacaatcg ttaatgtacc acgcgcctaa
    12901 agaatctcgt cccttctgcc agcaccgtta taacttagcg cgcacacact taaaaagaac
    12961 tattttggcg ctgccagaaa gcaacgttat tcatgccggg tatggtagct atgccgtgat
    13021 tgaggtggac ttagacggag gagataaggc attttacttt gttgcgttca gggctttcag
    13081 ggaaaagaaa aaactccgtt tgcatgtaac tagcgcttat cccatttctg aaaaacagaa
    13141 aggtaaatca gtgaaatttt tcaccattgc ctacaactta ttgagaaata agcagcttcc
    13201 tcagccctca aaataacaaa acccacctta aggtgggttt cgccagagaa ttatctctgg
    13261 tattcagaac gccattaccg gactttgcct tgaccttgcg ataatcgcag gttgcgggat
    13321 gtctgaattt cttcagtctg ctgcatcctg gaagatgaga acatgtgttc ttattttcgt
    13381 ctctatcata gttgagtatt tactctctta caatcagatc tctttcattg ctcaacaggc
    13441 gatggcttca gactttgcat tacggaattt ttaagaaagg cagggcgaaa cgaggaagaa
    13501 gcttttcgcc ctggacaaca ttcctgctga cggcactacc ataaaaaaac acaacgcttt
    13561 caacaacctt gcgtttttca tcttccgtag cggctcggaa taaatttacg ttcttacatt
    13621 ccgtctcata gtctttgcga ggcccgtccc agatagctgt cccagtcttt ccataccggc
    13681 tgcaaaccct gagcggttaa cgcggcagca accgcttccg gtctgcgatc gtcgtgcggt
    13741 gagaactgtt ccaactcggg gtgattatcg gcatagccac ctggctgcgt tttcgagaag
    13801 gcgctgacgt tattgatcgc cagcggaata acgcgatcgc gaaaccacgg tgattcccgc
    13861 gtggagagtg acagttcaat ctccggtgca agcagtcgga aggcgcagat ggtttgcact
    13921 aactggcgtt catccataat cgacgcaggc tcaatgccgc cagtacacgg gcgcaggcgc
    13981 ggaaaggaga cagagtaacg gctttgccag taatgctgtt gcagccatag caaatgttcg
    14041 gcaaccatat agcagtcaac gcgccagttg tcggaaaggc caattagcgc gccgaggcct
    14101 atcttatcaa tccccgcacg ccccagccga tccggcgttt ccagccgcca gaagaagtcc
    14161 tgttttttgc ctttcagatg atggcgggca taagtcgcct cgtgatatgt ctcctgataa
    14221 accatcacgc catccagacc aagctgcttt aactcggcgt attccgtctt cgccagcggt
    14281 tgcacttcca tttgtagtga agagaactgt tcacgcaggg cggggagatg acgacgaaag
    14341 taatccatcc ccactttcgc ctgatgttca ccagtgacta atagcagatg ttcaaagccc
    14401 atctcccgta tagcggcgct ttccctggca atatccgctt catccagcgt tttgcgcttg
    14461 atgcgattac tcatggaaaa tccgcagtac gtgcagtcgt tagcgcaaag attggaaaga
    14521 taaagcggga cgtagaaact aactgtgttg ccaaatcgct gacgggtcag acgctgcgcc
    14581 cgttgggcca gttgttccag atagccactg gcggctggcg ataacagcgc catcatatcg
    14641 tcgcgggtga attgcgaggc atttagcgcc cgctctacgt caacagccgt tttgccgttg
    14701 atacgcaggc ggatgtcatc ccagtccagt tgtcgccagc gatcgctgaa ggttttcatg
    14761 ccgatgcctc cagaaatcca gtcagcgggc tggtggcatg agcaaaatga ctgcggctgc
    14821 ccggtccgga ctgacgtgcc agcaggcctg cttctaccgc cagacgaaat gccttcgcca
    14881 tgttgacggg atcgtccgct acggcaatcg ccgtattcac taacaccgcg tcggccccca
    14941 tttccagggc ctgcgctgca tggctgggaa cgccgatgcc agcatcgaca accaccggaa
    15001 ctgtggcctg ctggataata atctccagca tggcacgggt ttccagtccc tgattcgagc
    15061 caatcggcgc gccgagcggc atcaccgctg cacagccgac ttcttccaga cgtttacaca
    15121 ataccggatc ggccccgcag taaggcagca cgacaaatcc ctgttgtacc agcatttcgg
    15181 cggctttcag agtttcgatg ggatcgggca acagccagcg ggcgtcaggg tgaatctcta
    15241 attttaacca gtttgtgcct aacgcttcac gtgccagatg ggcggcgaaa atggcttctt
    15301 ccgctgtttt cgccccggaa gtatttggca gcagggtcac acccgccgcg ataagcggtt
    15361 cgaggatagc gtcgttgtgc tggcgcaagt cgacacgttt catcgccagt gtcaccagct
    15421 ggctgccgga agcgcggatc gcctccacca tcagttgtga agaagcgaat ttccctgtgc
    15481 cggtaaacag atgtgaatca aacgttttgt ccgcaatacg taacatctca accccctgca
    15541 ataacctgaa aaagcaggat ctggtcgcca tcctgcacga tatgttgcgt ccactgctca
    15601 cgcgggacga tttgctgatt aatcgccaga gccgcgcccg cttgtcgttg gtcgagttgc
    15661 tccagtagtt cgtgaacagt ttgcccggtg gcgcactgca tcggttgatc gttaaacagg
    15721 atctgcattg cttcctccgc ataccgggca accactggcg cggcgcaacg ccaggctgcg
    15781 ccactggctc gatttaccgt cgaacagtcg gagttctccc gcaggtgtct ctataccgct
    15841 taataactta atggcttcca gtgcctgcaa agtgcccata accccgacca ccgggccaac
    15901 cacgcccgcc gtgcggcagt tgcgttctgg ctcctggtta tctggccaca ggcagcggta
    15961 acacccctgc tcccagggcg gcgtcagtac catcaactga ccgccaaatc cgaccgcgct
    16021 ggcggtgata agcggcgtgt tgagtaccac gcaggcggca ttaatctcct ggcgagtcgc
    16081 catattgtcg gtacagtcga gcaccacatc ggcccgtgca accgcatctt ttaacgcctc
    16141 acccgttaac cgttgttgta atgctgtcag ttgaatgtcg ggattcaact gtgtcagtcg
    16201 ctgttggctg acctgcgatt tcgggctgtt gatatcttca gtggtaaaga gaatttgtcg
    16261 ttacagattg cttaaatgca catcgtcgtc atctgccagt accagcgtcc cgacgccagc
    16321 gcccgccagg tatagcgcag caggtgtacc cagcccgcca agaccgataa tcagcacctg
    16381 gctgtcgagc agtttttgct gcccgtcaag agcgatatca tcgagcagga tttggcggct
    16441 ataacgcata aaatcacggt cattcatcgc caactcctgc aatttccagc aactgtgccg
    16501 ttgccaaacg ccagtctgcg gcttgagtaa tggcgctgat gacggcgata ctgccgacac
    16561 ccgttgctat caccgcaggc gcgcgtgcca gactgatacc gccaatcgcc acggtgggat
    16621 aatccgccag tcgctcaaca tgccgtgcca gctgttccag cccctgcggt gcagaaggca
    16681 tctgtttggt ttgcgtcggg aacacatgtc ccagcgcgat ataagagggg cgtgctgcca
    16741 gcgcgacgtc gatttccata tcgtcatgtg tcgaaacacc cagccgcagg cctgccgcgc
    16801 ggatggcatt gagatcggtg gcttgcaaat cttcctgccc caaatggacg ccatacgcct
    16861 gatgcttgat cgcgagccgc cagtaatcgt tgataaacaa tcgcgcgtta tagcggcggc
    16921 ccagcgcaat tgccgccacg acatcggctt ccacctcttc atcgcgccga tctttgatgc
    16981 gtagctggag agtacgtacg cctgcatcca acagacgttc gatccactgt acgctgtcca
    17041 ccactgggta cagtcctaaa cgaaaaggta caggaggaaa atcaggctga tacatcacgc
    17101 ttcctcctta cgcaggtaga tttctccgcc tctggcacgg aagttctccg acatatccgc
    17161 cattcccatt tcaatagttt gcgtggcggc gtaatcacgc acttcctggc tgattttcat
    17221 cgagcagaat ttcggcccac acatggagca aaaatgggcg actttacctg actcttgcgg
    17281 cagggtttca tcgtgataag cgcgggcggt aaacgggtcg agggccagat taaactggtc
    17341 ttcccagcga aattcgaagc gggctttcga catggagtta tcgcgaattt gcgcgcccgg
    17401 atgccctttc gccaggtcag cggcgtgggc ggcaatctta taggtgataa gcccctgctt
    17461 aacatcttct ttattaggca gacccagatg ctcttttggt gttacgtaac agagcatcgc
    17521 gcagccaaac cagccaatca tcgccgcacc aatccccgac gtgaagtggt catagcccgg
    17581 cgcaatatcg gtagttagcg gccccagagt gtaaaacggc gcttcgtggc agtgctctaa
    17641 ctcctcggtc atattgcggc ggatcatctg catcggcacg tggcctgggc cttcaatcat
    17701 cacctgcacg tcatattccc aggcaatttt ggtcagttcg cccagcgtat gcagctcggc
    17761 aaactgcgct tcatcgttgg cgtcctgaat agaaccgggg cgcagaccgt cgcccagcga
    17821 cagcgaaacg tcataagcgg cacagatttc acaaatttcg cggaagtgtt gatagaggaa
    17881 attttcctga tgatgggaga ggcaccattt cgccataatc gaaccgccgc gagagacgat
    17941 accggtcagg cgtttcgcgg tcatcggcac atagcgcaac agtacgcccg catggatagt
    18001 gaagtaatcc acaccttgct cggcctgttc cagcagcgtg tcgcggaacg cttcccaggt
    18061 aagatcttcg gcgatcccgt taaccttctc cagcgcctgg tagatcggca ctgtaccgat
    18121 cggcaccgga ctgttacgca aaatccactc gcgggtttcg tgaatatagc gaccggtgga
    18181 gagatccatc accgtatccg ctccccagcg cgtggaccat accagctttt ccacttcttc
    18241 ttcgatggaa gaggtgaccg ccgagttgcc gatattggcg ttaactttta ccaggaagtt
    18301 acggccaata atcatcggct ccgattccgg atgattaatg ttggccggga taatcgcacg
    18361 tccggcagca acttcatcac ggacaaattc cgcagtgata ttttccggca gacgtgcgcc
    18421 aaagctcatt cccggatgct ggtggcgtaa aacttcgcta cgtatgcgct cgcggcccat
    18481 attctcgcgg atggcgatga attccatttc cggtgtgatg atgccctggc gggcgtagtg
    18541 cagttgggtg acacggcgtc ctgctttggc gcgttttggt gttagtacgc cgctaaaacg
    18601 cagttcgtcg aggccatcat ctgccagccg cgctttagtg taatcggaac tgcgcacggt
    18661 aagttcttcg gtatcgccgc gcgcatcgat ccacggctgg cgtagttttg ccagcccttg
    18721 ctgcacgtta atggcgatct gcggatcgcc atatgggccg gaggtgtcgt agaccggaat
    18781 cgcttcgttt tcttcaaact gcggctgttc tttgctgccg ccgattagcg tcgggctaag
    18841 ctggatctca cgcatcggca cgcgaacgcc agagtgtgtg ccagtgaggt aaatgcgttt
    18901 tgagttggga aaggcggtgc cttccagggt gtcgataaaa tgttgggccc gggcgcgttg
    18961 ttcgcggcgg gtcagttttg ttgcagacat agctcattcc aaaaagttaa ggacgtggct
    19021 tgtcagacga cggatgaagc aagagacgat cgccgcaaag gcgatgcgat agcagattaa
    19081 ctcttgttcc cttcgcaggt attagcctga tcaggttccg cggatcccga ataaacggtc
    19141 tcagccagtt aaggcactcc gacaagaaat tagcccccac aaacggggcg ttgaatgtaa
    19201 attacgcgtt aacagcgcag aactcaagca ggatgtttga cgcgggcggc gtcaagcacc
    19261 agcagaatca gcttatcttc cagcacaaag cgcgcttcca gcgcctcgcc gatgtcagat
    19321 aaaacctttt gaaactcaag gtaattatca tgatcgatgg cggtttccag gctggaatcg
    19381 tagtaatcca taatctgttg ggtattggct tcgagttgcg gccaaatctt cgcggcgcgc
    19441 gcgagttgcc cgttgccttc cagcttatga agaatgcgct cataaatact gaaatgtccg
    19501 gcagacaagt aatcgaccag gctctgacaa aaatcatcaa gggctttttc gtttagcctc
    19561 atgtacgatt ctttgccagg cttaatgcca accagattgt agtaagccac gagcagatgc
    19621 ttacgtacat gtagccagcg atcaaccagt ttgttacttc ctctgacgcg ctccgtcagg
    19681 ttatcgagct ggttaagcat gattgactcc gcaagtttgt attcaaaaac tgctcagtga
    19741 gaaatgtaaa aaccatgtta aacatgccag tgatgcaaag gtagtgcaag agctatggat
    19801 cgtataattg aaaaattaga tcacggctgg tgggtcgtca gccatgaaca aaaattatgg
    19861 ttgccgaagg gagaattgcc atatggcgaa gcggcaaatt tcgatcttgt gggtcagcgc
    19921 gcactacaaa tcggcgaatg gcagggggaa cctgtttggt tagtacaaca gcagcggcgt
    19981 cacgatatgg ggtcggtacg tcaggtcatt gatctcgatg ttgtgctgtt tcaactggcc
    20041 ggacgaggcg tacaactggc ggagttttac cgatcgcata aatactgtgg ttactgcggg
    20101 catgaaatgt atccgagcaa aaccgaatgg gcgatgctgt gcagccattg ccgtgagcgt
    20161 tactacccgc aaatcgcccc ctgcattatt gttgccatcc gtcgcgatga ttcgatcctc
    20221 ctcgcccagc atacccgcca tcgtaacggt gtccatacag tacttgccgg attcgtcgaa
    20281 gtgggcgaaa ccctcgagca ggcagtcgcg cgggaagtga tggaagagag cggaattaaa
    20341 gttaaaaact tgcgttacgt gacttctcag ccgtggccgt ttcctcagtc tttaatgacc
    20401 gcgtttatgg cggaatatga cagcggcgac atcgtgatcg acccgaaaga attgctcgag
    20461 gcgaactggt atcgctatga cgatttgccg ttactcccgc cgcccggcac cgtagcgcgc
    20521 cgtctgatag aagatactgt ggcgatgtgt cgggcagagt atgagtgatg atacactgac
    20581 cgcctgacgc actaaggaac agccaaaatg accgaactta aaaacgatcg ttatctgcgg
    20641 gcgctgctgc gccagcccgt tgatgtcact ccagtatgga tgatgcgcca ggcgggtcgc
    20701 tatctaccgg aatataaagt cacgcgcgcc caggcgggcg attttatgtc gctgtgcaaa
    20761 aacgccgagc tggcgtgcga agtgactttg caaccgctgc gtcgctaccc gctggatgcg
    20821 gcgatcctct tttccgatat cctcaccgtg ccggacgcga tggggttagg gctctatttt
    20881 gaagccggag aaggtccgcg ttttacctcg ccagtcacct gcaaagccga cgtcgataag
    20941 ctgccaattc cggacccgga agatgagctg ggttacgtga tgaacgcggt gcgtaccatt
    21001 cgtcgcgaac tgaaaggcga agtgccgctg attggttttt ccggcagccc gtggacgctg
    21061 gcaacctaca tggtggaagg cggcagcagc aaagccttca ccgtgatcaa aaaaatgatg
    21121 tatgccgatc cgcaggcgct gcacgctcta ctcgataaac tggcgaaaag cgtcactttg
    21181 tatctgaatg cgcagattaa agccggtgct caggcagtga tgattttcga cacctggggc
    21241 ggtgtgctta ccgggcgcga ttatcaacag ttctcgctct attacatgca taaaattgtt
    21301 gatggtttac tgcgtgaaaa cgacggtcgc cgcgtaccgg tcacgctgtt taccaaaggc
    21361 ggcggacagt ggctggaagc gatggcagaa accggttgcg atgcgttggg cctcgactgg
    21421 acaacggata tcgccgatgc gcgccgccgt gtgggcaata aagtcgcgtt gcagggtaat
    21481 atggatccgt cgatgctgta cgcgccgcct gcccgcattg aagaagaagt agcgactata
    21541 cttgcaggtt tcggtcacgg cgaaggtcat gtctttaacc ttggtcacgg cattcatcag
    21601 gatgtgccgc cagaacatgc tggcgtgttc gtggaggcag tgcatcgact gtctgaacaa
    21661 tatcaccgct aaggagtgat tatggatctc gcgtcattac gtgctcaaca aatcgaactg
    21721 gcttcttctg tgatccgcga ggatcgactc gataaagatc caccggatct gatcgccgga
    21781 gccgatgtcg ggtttgagca gggcggagaa gtgacgcgag cggcgatggt gctgctgaaa
    21841 tatccctcgc ttgagctggt ggagtataaa gttgcccgca tcgccaccac catgccttac
    21901 attccaggtt ttctttcctt ccgcgaatat cctgcgctgc tggcagcgtg ggagatgctg
    21961 tcgcaaaagc cggatttagt gtttgtcgat ggtcatggga tctcgcatcc tcgccgtctt
    22021 ggcgtcgcca gccattttgg tttgatggtg gatgtgccaa cgatcggcgt ggcgaaaaaa
    22081 cggctctgcg gtaaattcga accgctctcc agcgaaccgg gcgcgctggc cccactgatg
    22141 gataaaggcg agcagctggc ctgggtctgg cgcagcaaag cgcgctgtaa cccgttgttt
    22201 atcgctaccg gccatcgggt cagcgtggac agcgcgctgg cgtgggtaca acgctgcatg
    22261 aaaggctatc gtctgccgga gccaacgcgc tgggcggacg cggtggcctc ggaacgtccg
    22321 gcgttcgtgc gctatacagc aaatcagccc taattcaggt aaactgcgga taatttccgt
    22381 atttgagaac ttaacatgtt acaaaaccca attcatctgc gtctggagcg cctggaaagc
    22441 tggcagcatg tcactttcat ggcttgctta tgcgaacgca tgtaccccaa ttacgccatg
    22501 ttctgccagc aaaccggttt tggtgatggg caaatttacc gtcgtattct cgatctcatc
    22561 tgggaaacgc tgaccgttaa agacgcaaaa gtaaatttcg acagccaact ggagaaattt
    22621 gaagaagcga ttccttcagc cgacgatttc gatctgtacg gcgtttatcc ggcaatcgat
    22681 gcctgcgtgg tgttaagtga actggtccat tcgcgtttga gtggtgaaac gctcgaacac
    22741 gcggtggaag tgagtaagac ctccatcacg accgttgcga tgctggaaat gactcaggtt
    22801 ggtcgcgaaa tgagcgatga agagcttaaa gaaaacccag ctgtagagca agaatgggac
    22861 attcagtggg aaatattccg acttttagct gagtgcgaag aacgcgatat cgagctgata
    22921 aaaggcctta gggcagacct gcgtgaggcg ggtgagagca atattggtat aatttttcag
    22981 caataagacc agaaaacgtg atttaacgcc tgatttgtcg tacctggagt cttccctttc
    23041 gccccccgtc tggtctacat ttggggggcg aaaaaaagtg gctatcggtg cgtgtatgca
    23101 ggagagtgct attctggcat ttccgtcgca ctcgatgctt agcaagcgat aaacacattg
    23161 taaggataac ttatgaacaa gactcaactg attgatgtaa ttgcagagaa agcagaactg
    23221 tccaaaaccc aggctaaagc tgctctggag tccactctgg ctgcaattac tgagtctctg
    23281 aaagaaggcg atgctgtaca actggttggt ttcggtacct tcaaagtgaa ccaccgcgct
    23341 gagcgtactg gccgcaaccc gcagaccggt aaagaaatca aaattgccgc agctaacgta
    23401 ccggcatttg tttctggcaa ggcactgaaa gacgcagtta agtaagattg cgtggcagtg
    23461 aacagtttta acgaaggggt ggtttcaccc cttttgtctt tctggcgtcg atcattgatg
    23521 ctggctggcg ctctgcttct cactgcctgt agtcataact cttcacttcc tccctttacc
    23581 gccagtggat ttgctgaaga ccagggcgcg gtacgcatct ggcgaaaaga cagcggcgat
    23641 aatgtgcatc tgcttgccgt gtttagcccg tggcgcagtg gcgataccac gacgcgagag
    23701 tatcgctggc agggcgataa cctcacgctc atcaatatca atgtttacag caaaccgccg
    23761 gtgaatattc gcgcgcgttt tgacgatcgc ggtgatctga gctttatgca acgtgaatcc
    23821 gatggggaaa agcagcagct ttctaacgac caaatcgatt tataccgtta tcgtgctgat
    23881 cagatccgcc agattagcga tgccttacgt caggggagag tcgtgctgcg ccaggggcgc
    23941 tggcatgcga tggaacagac cgtgaccacc tgcgaagggc aaaccattaa acctgattta
    24001 gattcgcagg cgatagcgca tatcgagcgc cgccagagcc gctcttctgt tgatgtcagc
    24061 gtggcatggc tggaagcgcc cgaaggttcg caattactgt tagtggcaaa ctctgatttc
    24121 tgtcgctggc aacccaacga gaaaacgttc tgatttacca gtggcccata cccatatgac
    24181 cgccaccacc gcagccgccg tagcccatgc ccattccggc tccgcgcgga atacccgctt
    24241 cagccatcgc gatatctcgt ttcacccgta actcatctaa cgactgacgc aaattctcca
    24301 tctctttggc gaccgcgtta attttgctgc tatccggtgg gttcgcggct aacagggcat
    24361 tgtattcata acgcttcgtc accagttgct gttgcagtgc gctgctttga gcgtaaaagt
    24421 cattatggat tttctgccac gctgtctgtt gttcgctggt caaaggcgcg gcattttgct
    24481 gccacatacc gtgtccgccg tgagcaaatg cagatgtcga tcccatcgcc attgctgaaa
    24541 gcgccatcat taccagggca attttcgtgt tccgtttcat ggttaatcct ccagtggttg
    24601 tcttacttcg ggtattgcat cttccgtgcc aacgatgaaa cgctgatatg acgggtaatc
    24661 tggcatgata aacgagtaaa aatgactcgc ctgctgcggg tagcgagtca tttttactca
    24721 ttgaaactta agcctttgtg ttacagcgca gggtaagcgc tgataaaaga tggcatgatt
    24781 tctgctgtca gaaagggatg agcaggcaaa gaagaagatg cgttttatgc aacgttctaa
    24841 agactcctta gctaaatggt taagcgcgat cctccccgtg gtcattgttg ggctggtagg
    24901 gttgtttgcg gtgacggtga ttcgcgatta tgggcgcgag actgccgccg ccagacaaac
    24961 gctgctggaa aaaggcagtg tacttattcg cgctcttgaa tccggctcgc gcgtcggcat
    25021 ggggatgcgc atgcatcatg cgcagcagca ggccttactg gaagaaatgg ccgggcagcc
    25081 tggagtacgt tggtttgcgg tcacggatga acaaggaaca atcgtgatgc atagcaactc
    25141 cggcatggtg ggaaaacagc tttattcccc gcaggaaatg cagcagttac atccgggaga
    25201 tgaagaagcg tggcggcgga tcgatagcgc agacggtgag cctgttctgg aaatttatcg
    25261 ccagtttcaa ccgatgtttg ctgctggaat gcaccggatg cgccatatgc agcagtatgc
    25321 cgcgacacca caagcaattt tcatcgcttt cgacgccagt aatattgtga gtgccgaaga
    25381 tcgtgagcag agaaacaccc tgattatcct cttcgccctg gcgacggtct tgctggcaag
    25441 cgtattgtca ttcttctggt atcgccgcta tctgcgctcg cgccagcttc tacaagatga
    25501 aatgaagcgc aaagagaagc tggtggcact ggggcatctg gcggcaggcg ttgcccacga
    25561 aatccgtaat ccactttcct caattaaagg gctggcgaaa tactttgccg aacgcgcgcc
    25621 agcaggggga gaagcgcatc aactggcgca ggtgatggcg aaagaagccg accgtttaaa
    25681 ccgcgtggta agcgagttgc tggaactggt taagccaacg catctggctt tgcaggcggt
    25741 ggatctcaac acgctgatta accactcatt acagctggta agccaggatg caaacagccg
    25801 ggagatccag ttacgcttta ccgccaacga cacattaccg gaaattcagg ccgatccgga
    25861 caggctgact caggtcctgt tgaatctcta tctcaatgct attcaggcga ttgttcagca
    25921 tggcgtgatt agcgtgacgg tcagcgaaag cggcgcgggc gtgaaaatca gcgttaccga
    25981 cagcggtaag ggaattgcgg cagatcagct tgaagccatc ttcactccgt acttcaccac
    26041 caaagccgaa ggcaccggat tggggctggc ggtcgtgcat aatattgttg aacaacacgg
    26101 tggtacaatt caggtcgcaa gccaggaggg aaaaggctca acgttcaccc tctggcttcc
    26161 ggtcaatatt acgcgtaagg acccacaagg atgacgcacg ataatatcga tattctggtg
    26221 gtggatgatg acattagcca ctgcactatt ttgcaggctt tactgcgcgg ctggggctat
    26281 aacgtcgcgc tggcgaacag cgggcgacag gcgctggagc aggtgcggga acaggttttt
    26341 gatcttgtgc tttgcgatgt gcgaatggcg gagatggacg gcatcgccac gctgaaagag
    26401 atcaaagcgt taaacccggc aattccggtg ctgattatga ctgcgtactc cagcgtcgag
    26461 acggcggtag aggcactgaa aactggggcg ctggattatc tcatcaagcc gctggatttc
    26521 gataacctac aggcgacgct ggaaaaggcg ctcgcgcata cgcacagtat tgatgctgaa
    26581 acacctgcgg tgactgccag ccagttcggt atggtcggta aaagcccggc gatgcaacac
    26641 ctgctcagtg aaatcgccct cgtcgcgcca tcggaagcca cagtgctgat ccacggcgat
    26701 tccggcaccg gtaaagagct ggtcgccagg gcgattcacg ccagtagcgc acgtagcgaa
    26761 aaaccgctgg taacgctcaa ctgtgcggca ctcaacgaat ccttgctgga atctgaattg
    26821 ttcggtcacg aaaaaggggc gtttactgga gccgataaac gccgggaagg gcgctttgtt
    26881 gaggcggacg gcggcacgct gtttctcgat gaaattggcg atatctcgcc gatgatgcag
    26941 gtgcgtctgc tgcgtgcgat tcaggagctc gaagttcagc gtgtcggtag caaccagact
    27001 atctcggttg atgtccggct gattgcggcg acccatcgcg atcttgccgc agaggtgaat
    27061 gccgggcgtt ttcgccagga tctctactat cgcctgaatg tggtggcgat tgaagtacca
    27121 tcgctgcggc aacggcggga agatatccct ctgctggctg gccattttct gcagcgcttt
    27181 gccgagcgta atcgcaaggc ggtaaaaggt tttacgcccc aggcgatgga tctgttgatt
    27241 cattacgact ggccgggaaa tattcgtgag ctggaaaacg cggtggaacg ggcagtggtg
    27301 ctgctgccgg ggaatatatt tccgaacgcg agctgccgct ggcgattgcc agtacgccga
    27361 tcccgctggg gcaaagtcag gatattcagc cgctggtgga agtggaaaaa gaggtgattc
    27421 tggcggcact ggagaaaacg ggcggcaaca aaactgaagc cgcccgtcag ttagggatca
    27481 cgcgtaaaac gttattggca aaactgtcgc gttagttctg ctcgcgttcg atagcacgcc
    27541 agccgatatc tttccggcag aagcagtcgt cccagtggat atcggtcatt aaggcatagg
    27601 cgcgtttctg cgcttctgcc acggtatgac ccagcgcggt gacgcacagt acgcgcccgc
    27661 cgttggtcac tacctgctcg tcatccgcca gttttgtgcc cgcgtggaac actttgccgc
    27721 ctgccacttc ttccagcagc aggccgtgga tcacgtcacc ggtgcggtaa tcacccggat
    27781 atccacccgc agccatcacc acgccgagag aagcgcgttc atcccactcg gacgttttct
    27841 cgtccagttt gctttcacag gccgccaggc agagctcaac cagatcggac ttcatgcgca
    27901 gcataatcgg ctgggtttcc ggatcgccaa agcggcagtt aaattcaata accttcggat
    27961 tgccctgttt gtcgatcatc aggcccgcgt agagaaaacc ggtgtaggtg ttgccttccg
    28021 ccgccatgcc tttcacggtt ggccagataa tacgttccat ggtgcgctga tgaacgtcat
    28081 cggttactac cggcgcgggg gagtaagcgc ccatcccgcc ggtgtttggt ccggtatctt
    28141 tatcgcctac gcgtttgtga tcctggctgg tagccatcgg cagcacatgc tcgccgtcca
    28201 ccatcacgat aaagctcgct tcttcgccat cgaggaactc ttcgataacg atgcgatgac
    28261 ccgcgtcgcc aaaagcgttg cccgccagca tatcgtgaac agccgcttcc gcttcttcca
    28321 gcgtcatcgc cacgataacg cctttcccgg cagccagacc gtccgcttta atgacgattg
    28381 gcgcgccttt ctcacgcaga tacgccagcg caggttctac ctcggtgaag ttctggtatt
    28441 ccgccgtagg gatcttatgg cgggccagga aatctttggt aaacgctttt gagccttcca
    28501 gttgggccgc acctgcggtt gggccgaaga ttttcagccc ggcggcgcgg aaggtatcga
    28561 ccacgccttt caccagcggc gcttccgggc cgacgatggt cagatcaatc ttttcgtttt
    28621 gtgcgaaatc caacagcgcc gggatatcgg tcacgccaat agcaacgttt tgcagcgcgg
    28681 gttccagcgc agtgcctgca ttacccggag caacaaaaac agtctcaacc agcggcgact
    28741 gggccgcttt ccaggccagc gcgtgctcgc gcccgccgtt accaatcact aatactttca
    28801 tctattgctc cattaatggc ggaagtggcg catgtcggtg aagagcatcg caataccgtg
    28861 ctcgtcggcg gcggcaatca cttcgtcatc acggatggaa ccgccaggct ggattacgca
    28921 ggtcacgccc gcagcggcgg cggcatcaat accgtcgcgg aacgggaaga acgcgtcaga
    28981 agccatcgag gaacctttca cttccaggcc ttcatcggca gctttaatac cggcgatttt
    29041 cgcggagtac acgcggctca tctggcccgc gccaataccg atggtcatat tgtttttggc
    29101 atagacgata gcattggatt tcacgaactt cgccactttc cagcagaaca gcgcatcgcg
    29161 cagttcctgt tcggtcggct gacgttgggt gacgacgcgc agttcttccg caccgaccat
    29221 ccccaggtca cgatcctgaa ccagcagacc gccgttcacg cgtttgaaat caagacccgg
    29281 aacacgctcg ccccactgac cgcaggtcag aacgcgtacg ttctgcttgg cggcggtgat
    29341 tttcagggct tcttcgctgg cggaaggcgc aataatcact tcgacaaact gacgagaaat
    29401 gatggcctgt gcggtttccg catctagctc gcggttaaag gcaatgatgc cgccgaatgc
    29461 ggaggttggg tcggttttgt acgcgcgatc gtaagcatca agaatggaat tgccgatagc
    29521 tacaccgcaa gggttggcgt gcttcacaat cacacatgcc ggctcggcga actctttcac
    29581 gcactccagc gccgcatcgg tatcggcgat gttgttataa gagagggctt taccctgaac
    29641 ctgggttgcg gtagcaacgg aggcttcttt cacattctct tctatataga aggcagcctg
    29701 ctggtggctg ttctcgccgt aacgcatatc ctgcttctta atgaagttca ggttcagcgt
    29761 gcgtgggaag cgaccggcgg cttctttgct ttcaccgtgg tacgccggaa ccatgctgcc
    29821 gaagtagttg gcaatcatgc tgtcgtaggc ggcagtgtgt tcgaaggctt tgatggcgag
    29881 gtcgaaacgg gttgcaagcg tcagcgatcc ttcgttgtca tccatctctt taataatggc
    29941 gtcgtagtcg ctgctcttca ccacgattgc gacatcttta tggttcttag cggcggagcg
    30001 caccatggtc gggccgccga tatcgatgtt ctcaaccgca tcttccagcg agcagccttc
    30061 acgagcaaca gtctgggcga acggatacag gttaacaacc accatatcga taggctggat
    30121 ctgatgttct tccataatgg catcgtcctg gccgcgacgg cccagaatgc caccatgtac
    30181 tttcggatgc agggtcttca cgcgtccatc catcatctcc gggaaaccgg tgtaatcgga
    30241 aacttcggtt accggcagac ctttttctgc taacagacgg gcagtgcccc ctgtagacag
    30301 cagctccaca ccgcgtgcgg aaagtgcctg ggcgaattcg acgataccgg ctttgtcaga
    30361 aacactgagc agagcgcggc ggactggacg acgttgttgc atggtaaatc ccctggattt
    30421 gactattaca gagagcgtta gctgaatttt tcgcgaaaaa ctcagctaac gcccctaacg
    30481 gggcatcctt atttttcgcc cgcattgtaa cgaaaacgtt tgcgcaacgc tcgcgaattt
    30541 ttctctttca atggtgatca caattttgac agtggctacc gtgggaaaaa tacagaaatt
    30601 acattgatga ttgtggataa ctctgtgcgt aaaaaggtat aaagcggggt tttgctgggg
    30661 aatgcagcag tcagtcattt ttctgcaatt tttctattgc ggcctgcgga gaactcccta
    30721 taatgaacct ccatcgacac ggcggatgtg aatcacttca cacaaacagc cggttcggtt
    30781 gaagagaaaa atcctgaaat tcagggttga ctctgaaaga ggaaagcgta atatacgcca
    30841 cactcacgac agtgcgctaa agctcgtcgc aactgctctt taacaattta tcagacaatc
    30901 tgtgtgggta ctcgaagata cggattctta acgtcgcaag acgataaatg aataccaag
//
LOCUS       DADMIB010000032        30226 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.032, whole genome shotgun sequence.
ACCESSION   DADMIB010000032 DADMIB010000000
VERSION     DADMIB010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30226
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.032"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..868)
                     /locus_tag="JNZ89_001380"
                     /pseudo
     CDS             complement(1..868)
                     /locus_tag="JNZ89_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310631.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
     gene            complement(843..1643)
                     /gene="otsB"
                     /locus_tag="JNZ89_001381"
                     /pseudo
     CDS             complement(843..1643)
                     /gene="otsB"
                     /locus_tag="JNZ89_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416411.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
     gene            complement(1810..2799)
                     /locus_tag="JNZ89_001382"
     CDS             complement(1810..2799)
                     /locus_tag="JNZ89_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter permease AraH"
                     /protein_id="HAY8935307.1"
                     /translation="MMSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVP
                     NFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTES
                     LWIGVAAGLLLGILCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIED
                     ESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPV
                     VRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGK
                     ISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV"
     gene            complement(2811..4325)
                     /locus_tag="JNZ89_001383"
     CDS             complement(2811..4325)
                     /locus_tag="JNZ89_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter ATP-binding protein
                     AraG"
                     /protein_id="HAY8935308.1"
                     /translation="MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA
                     GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN
                     IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR
                     NAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD
                     GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPIS
                     LAVRSGEIVGLFGLVGAGRSELMKGLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM
                     LCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADQHIRSLNIKTPG
                     AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV
                     AVLFASSDLPEVLGVADRIVVMREGAIAGELLHEQADERQALSLAMPKVSQAVA"
     gene            complement(4395..5383)
                     /locus_tag="JNZ89_001384"
                     /pseudo
     CDS             complement(4395..5383)
                     /locus_tag="JNZ89_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001397210.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter substrate-binding
                     protein"
     gene            6097..6600
                     /locus_tag="JNZ89_001385"
     CDS             6097..6600
                     /locus_tag="JNZ89_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin-like protein"
                     /protein_id="HAY8935309.1"
                     /translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR
                     AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA
                     QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN
                     VVSHQLH"
     gene            complement(6679..6930)
                     /locus_tag="JNZ89_001386"
     CDS             complement(6679..6930)
                     /locus_tag="JNZ89_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2766 domain-containing protein"
                     /protein_id="HAY8935310.1"
                     /translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ
                     LKNIDFSNHPAAADPVTMRAIQKAIALIELKFTPQGESH"
     gene            complement(7045..7131)
                     /gene="azuC"
                     /locus_tag="JNZ89_001387"
     CDS             complement(7045..7131)
                     /gene="azuC"
                     /locus_tag="JNZ89_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein AzuC"
                     /protein_id="HAY8935311.1"
                     /translation="MKLRKILKSMFNNYCKTFKDVPPGNMFR"
     gene            7394..7717
                     /locus_tag="JNZ89_001388"
     CDS             7394..7717
                     /locus_tag="JNZ89_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935312.1"
                     /translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ
                     HAHTDRYVSRGIADRACQQEGYTHAIPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA
                     FPVFL"
     gene            7888..8385
                     /gene="ftnA"
                     /locus_tag="JNZ89_001389"
     CDS             7888..8385
                     /gene="ftnA"
                     /locus_tag="JNZ89_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HAY8935313.1"
                     /translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR
                     RHAQEEMTHMQHLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN
                     ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
                     LDTQN"
     gene            complement(8423..8662)
                     /locus_tag="JNZ89_001390"
     CDS             complement(8423..8662)
                     /locus_tag="JNZ89_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecH family protein"
                     /protein_id="HAY8935314.1"
                     /translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA
                     EGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH"
     gene            8853..10064
                     /gene="tyrP"
                     /locus_tag="JNZ89_001391"
     CDS             8853..10064
                     /gene="tyrP"
                     /locus_tag="JNZ89_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter TyrP"
                     /protein_id="HAY8935315.1"
                     /translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW
                     ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
                     GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM
                     LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNVRKLRRVF
                     ITGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH
                     LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV
                     MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF
                     LIAAGLLPEVR"
     gene            complement(10126..10791)
                     /gene="yecA"
                     /locus_tag="JNZ89_001392"
     CDS             complement(10126..10791)
                     /gene="yecA"
                     /locus_tag="JNZ89_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YecA"
                     /protein_id="HAY8935316.1"
                     /translation="MKTGPLNESELEWLDDILTKYNTNHAILDVAELDDLLTAVLSSP
                     QEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFG
                     LREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMS
                     PEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQC
                     CLH"
     gene            complement(10987..11073)
                     /locus_tag="JNZ89_001393"
     tRNA            complement(10987..11073)
                     /locus_tag="JNZ89_001393"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11037..11039),aa:Leu,seq:taa)
     gene            complement(11086..11159)
                     /locus_tag="JNZ89_001394"
     tRNA            complement(11086..11159)
                     /locus_tag="JNZ89_001394"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11125..11127),aa:Cys,seq:gca)
     gene            complement(11214..11289)
                     /locus_tag="JNZ89_001395"
     tRNA            complement(11214..11289)
                     /locus_tag="JNZ89_001395"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11254..11256),aa:Gly,seq:gcc)
     gene            complement(11441..11989)
                     /gene="pgsA"
                     /locus_tag="JNZ89_001396"
     CDS             complement(11441..11989)
                     /gene="pgsA"
                     /locus_tag="JNZ89_001396"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HAY8935317.1"
                     /translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCGAAV
                     TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
                     IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA
                     AVLTLWSMLQYLSAARADLLDQ"
     gene            complement(12046..13878)
                     /gene="uvrC"
                     /locus_tag="JNZ89_001397"
     CDS             complement(12046..13878)
                     /gene="uvrC"
                     /locus_tag="JNZ89_001397"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310678.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HAY8935318.1"
                     /translation="MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS
                     SYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY
                     PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
                     NRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETAS
                     QNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKV
                     LGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS
                     ELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEV
                     KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRY
                     GKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLET
                     LFFEPEDEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGP
                     KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
     gene            complement(13875..14531)
                     /gene="uvrY"
                     /locus_tag="JNZ89_001398"
     CDS             complement(13875..14531)
                     /gene="uvrY"
                     /locus_tag="JNZ89_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrY/SirA/GacA family response regulator
                     transcription factor"
                     /protein_id="HAY8935319.1"
                     /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR
                     TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL
                     SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM
                     ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ
                     "
     gene            14826..15002
                     /locus_tag="JNZ89_001399"
     CDS             14826..15002
                     /locus_tag="JNZ89_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935320.1"
                     /translation="MIKIFIGHYINVFYSTADITLKKQPLLFLAKLMVYSAALTFFTA
                     NFHCNMTRKINEYA"
     gene            14989..15213
                     /locus_tag="JNZ89_001400"
     CDS             14989..15213
                     /locus_tag="JNZ89_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2594 family protein"
                     /protein_id="HAY8935321.1"
                     /translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK
                     MEKQLALIEDETQAAVFSKTVKQIKQAYRQ"
     gene            complement(15280..16002)
                     /gene="sdiA"
                     /locus_tag="JNZ89_001401"
     CDS             complement(15280..16002)
                     /gene="sdiA"
                     /locus_tag="JNZ89_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SdiA"
                     /protein_id="HAY8935322.1"
                     /translation="MQDTDFFSWRRTMLLRFQRMEAAEEVYHEIELQAQQLEYDYYSL
                     CVRHPVPFTRPKVAFYTNYPESWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSE
                     AQPLWEAAHAHGLRRGVTQYLMLPNRALGFLSFSRCSTREIPILSDELQLKMQLLVRE
                     SLMALMRLNDEIVMTPEMNFSKREKEILKWTAEGKTSAEIAMILSISENTVNFHQKNM
                     QKKINAPNKTQVACYAAATGLI"
     gene            complement(16232..16984)
                     /gene="yecC"
                     /locus_tag="JNZ89_001402"
     CDS             complement(16232..16984)
                     /gene="yecC"
                     /locus_tag="JNZ89_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine ABC transporter ATP-binding protein
                     YecC"
                     /protein_id="HAY8935323.1"
                     /translation="MSAIEVKNLVKKFQGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT
                     LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV
                     LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
                     MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD
                     LGRIVEQGAAKALFADPQQPRTRQFLEKFLLQ"
     gene            complement(16981..17649)
                     /gene="tcyL"
                     /locus_tag="JNZ89_001403"
     CDS             complement(16981..17649)
                     /gene="tcyL"
                     /locus_tag="JNZ89_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter permease"
                     /protein_id="HAY8935324.1"
                     /translation="MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMR
                     LSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPILSAMIGLSLNTAAY
                     AAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
                     SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQE
                     REPK"
     gene            complement(17664..18650)
                     /gene="dcyD"
                     /locus_tag="JNZ89_001404"
     CDS             complement(17664..18650)
                     /gene="dcyD"
                     /locus_tag="JNZ89_001404"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HAY8935325.1"
                     /translation="MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTP
                     MAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENP
                     IGTTAENYLTNGNRLLLNLFNTQIEMCDALTDPNAQLEELATRVEAQGFRPYVIPVGG
                     SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGV
                     TVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLA
                     RLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV"
     gene            complement(18755..19555)
                     /gene="tcyJ"
                     /locus_tag="JNZ89_001405"
     CDS             complement(18755..19555)
                     /gene="tcyJ"
                     /locus_tag="JNZ89_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8935326.1"
                     /translation="MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLL
                     VGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRID
                     VVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNY
                     EEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEA
                     FSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK"
     gene            complement(19643..20194)
                     /gene="fliZ"
                     /locus_tag="JNZ89_001406"
     CDS             complement(19643..20194)
                     /gene="fliZ"
                     /locus_tag="JNZ89_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310687.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliZ"
                     /protein_id="HAY8935327.1"
                     /translation="MMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIV
                     NKIEISRLDTLLDENGWQVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEM
                     SPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQ
                     HYQRQTCTGLVQKSSSLPASDIY"
     gene            complement(20240..20959)
                     /locus_tag="JNZ89_001407"
     CDS             complement(20240..20959)
                     /locus_tag="JNZ89_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HAY8935328.1"
                     /translation="MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDL
                     LQAGGIGLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQ
                     AIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELV
                     TDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGE
                     SRVSQLHSQAIKRLSTKLGKL"
     gene            complement(21279..22985)
                     /locus_tag="JNZ89_001408"
     CDS             complement(21279..22985)
                     /locus_tag="JNZ89_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="HAY8935329.1"
                     /translation="MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDD
                     AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRILELTVQASTG
                     TNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
                     KKIDSDTLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALS
                     RLKTGDTVTTTGSSAAIYTYDAAKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYT
                     RSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLATTG
                     SIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSA
                     TASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKF
                     AATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSIDKFRSSLGAIQNRLDSA
                     VTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLL
                     QG"
     gene            23251..24657
                     /gene="fliD"
                     /locus_tag="JNZ89_001409"
     CDS             23251..24657
                     /gene="fliD"
                     /locus_tag="JNZ89_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HAY8935330.1"
                     /translation="MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKL
                     SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHL
                     AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA
                     KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV
                     SVAAKNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK
                     DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS
                     SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS
                     NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKKQFTQLDVLMTSL
                     NSTSSYLTQQFENNSNSK"
     gene            24682..25092
                     /gene="fliS"
                     /locus_tag="JNZ89_001410"
     CDS             24682..25092
                     /gene="fliS"
                     /locus_tag="JNZ89_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HAY8935331.1"
                     /translation="MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARL
                     FMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLR
                     NDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV"
     gene            25092..25458
                     /gene="fliT"
                     /locus_tag="JNZ89_001411"
                     /pseudo
     CDS             25092..25458
                     /gene="fliT"
                     /locus_tag="JNZ89_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001015018.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliT"
     gene            25536..27023
                     /gene="amyA"
                     /locus_tag="JNZ89_001412"
     CDS             25536..27023
                     /gene="amyA"
                     /locus_tag="JNZ89_001412"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY8935332.1"
                     /translation="MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPA
                     YKGASGGYSVGYDSYNLFDLGEFDQKGSIPTKYGDKVQLLAAIDALKRNDIAVLLDVV
                     VNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCF
                     SGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY
                     WARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQT
                     YIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQ
                     PLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPII
                     EQLDELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEYPGCVVVMSNGDDGEKTIHLG
                     ENYGNKTWRDFLGNRQESVITDEHGEATFFCNGGSVSVWVIEEVI"
     gene            complement(27057..27470)
                     /locus_tag="JNZ89_001413"
     CDS             complement(27057..27470)
                     /locus_tag="JNZ89_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310694.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8935333.1"
                     /translation="MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQ
                     RALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLALMSDDLTNVTVKRELYEVERD
                     GNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP"
     gene            27657..28862
                     /gene="yedE"
                     /locus_tag="JNZ89_001414"
     CDS             27657..28862
                     /gene="yedE"
                     /locus_tag="JNZ89_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HAY8935334.1"
                     /translation="MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGE
                     FTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVK
                     LRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSW
                     FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQ
                     PKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYV
                     QLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS
                     TILAYYWDDFAPALATDWDKINLLKTFGPMGGLLVTYLLLFTALMLIIGWEKRFFRRA
                     APQTAKEIA"
     gene            28859..29092
                     /gene="yedF"
                     /locus_tag="JNZ89_001415"
     CDS             28859..29092
                     /gene="yedF"
                     /locus_tag="JNZ89_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HAY8935335.1"
                     /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP
                     QSINNIPLDARNHGYTVRDIQQDGPTIRYLIQK"
     gene            29199..29870
                     /locus_tag="JNZ89_001416"
     CDS             29199..29870
                     /locus_tag="JNZ89_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HAY8935336.1"
                     /translation="MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKV
                     LLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADG
                     WFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFEHGDEAEGFLIVTAAADQGLVDIH
                     DRRPLVLSPEAAQEWMRQEIGGKEASEIATNGCVPANQFTWHPVSRAVGNVKNQGAEL
                     IQPVC"
     gene            complement(29910..>30226)
                     /locus_tag="JNZ89_001417"
     CDS             complement(29910..>30226)
                     /locus_tag="JNZ89_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8935337.1"
                     /translation="ILDQGWYEMRRQLEYKQLWRGGQVFAVPPACTSQRCACCGHTAK
                     ENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRPLKQEPTEMIQA
                     TA"
BASE COUNT         7502 a         7783 c         7242 g         7699 t
ORIGIN      
        1 taacgaattt taccatgatg ctgcggatat ttttccagca acgcttcata ggcgagaaaa
       61 cgctctggca aacctttgga ataatccagc cgttcgacag aaaagatatt ttgtacgttt
      121 ttcagttccg ctttaagttg cgccagtttt ggcggcagtg gcccggcagc ctgtttggct
      181 atttctttcg gttcaatgcc gatcgggtag acttctgttc gaaatgcttt gccccaggct
      241 gtatggcttt ttgcgctacg tgtcgtgacg cgggtcaggt tagaaagaca atccaggaac
      301 gccagacgat cgttttctgt ctggaaaccc agcaaatcat aatcacaaag ctgttcaagc
      361 aaggtgtcat atgtcggcag cgcgttgaag atttccggtg tcgggaaagg aatatgcaga
      421 aagaaaccaa tgcgattatt caccccacgt ttgcgtaatt catgcgcaaa gggcaacagg
      481 tgataatcgt ggatccagat aatgtcatcg tcttgcaaca gcggcagtaa tttatctgcc
      541 agcaacgcat ttacgcgtag atagccgtcc caggcaggac gctgaaattg catcagatcg
      601 agccgataat gaaaagcggg ccagagaacg gcattggaga attggttgta gtattcgtca
      661 aggtcctgtt cgctgaggtt aaaagaggcc cacgtaatgt tacctttttt agcggctgat
      721 cctcattccc tgtttcacca ctccagccaa accacagtcc gcctgtggct ttcagtgccc
      781 ccagtatgcc aacggcaagg ccaccggcac tggcggcgtg ctcgtctggt ggtgcaatcc
      841 ggttagatac tacgactaaa cgactcatag tcatcactcc tgttattttc tcttttttgt
      901 tgtaatgcgg tggttatcat ttcaagcctg ctccagacat ccggcacacc cgccagtcgc
      961 catgatgcct gagttgcacc tgtgccaatt tttactgaca ttccgcccag tcggttaacg
     1021 actgcgaagc cagattcatc ggttaaatca tcgcccagaa atacgggcgt tcgcccgata
     1081 aagggagctt cctgcataaa agctgcaatt gcctcacctt tactggtacc tctcggtttg
     1141 atctcgacaa cacactttcc ctgctgtaac gccatttgtg gccagatctg agtaatacgt
     1201 tacgctaatg tcattaatgc gtcttcatgc tgcggagcct gacgataatg cagcgcaaaa
     1261 gccatccctt tcgcctccag ctccgcgccg ggatactgag cgataactgt atgcagttgc
     1321 acgctaatat cacgcgcaat cgcatccggc agatgaacga tatgcgtttt accattgatg
     1381 tcacggcgct ccgccccatg cacgcccgct aacgggaagc gataaggttt tgccagtgcg
     1441 tcaagctcca ccattgagcg ccctgatatc aatgccaatg caccatcact tgcggttgcc
     1501 agtagctgta gtccttgcag aatattgtca ggcacgacga cctgatcggg atgcggtttg
     1561 atttccgcca gcgttccatc gagatcaaaa aaccaggcat atttcgcgga tagttcaggg
     1621 gtttcggtta acggttctgt cacccggttc tcctacttct cttttcttat tgttttgcgc
     1681 agaacgcgct ttacagacat gtaagtatag acagtgtgac gggggtcgcc atttgcaacg
     1741 aagaacagcc aaccgttatg gcggttggct gtggtgggaa aaaacgctaa attgttgcag
     1801 aaaaaagcat cagacagtgc gtttcgcttt ttgcttgtaa cggtcgaaga tcaccgctgc
     1861 cagcaggatt aagccgcgaa ccacgtactg cgcgaaagga gaaatattaa gcaggttcat
     1921 ggcgttttcc acggtgccta aaattaagat acccgccacc acatatgaga tttttccgat
     1981 gcctcctttc agagaaacgc cacctaaaac acaggcggag ataacaatca gctcgtaacc
     2041 aatcgacgtc attggctgcc cactggtcat acgtgaagcc agaataattc cggctatcgc
     2101 agataccagg ccagagagaa caaagataat aattttggtg cgaacaaccg gtacacccgc
     2161 cagacgcgca gcctcttcgt tcccgccaat cgccagggtg ttacgaccaa aggtggtttt
     2221 attcagcaac aaaccaaaga taatcagaca cgcgacggtg agccagattg gcgcaggcag
     2281 accgaaccag ttagcgtaac caagggcaaa gaagctttca tcttcgatac cgaccgcttt
     2341 accgtctgaa atgatgtacg ccagacctcg aacaatctgc atcgttgcca gtgttgtgat
     2401 cagagcattt attttcagtt tggcgataac aaagccattg accaggccac agagaatgcc
     2461 aagcagcaac cccgctgcca cgccaatcca caggctttca gtcaggttga taaccaccgc
     2521 cgtggtgaca cccgcacagg caattacgga ggcgacagaa aggtcaaagt caccggaagc
     2581 aaggcagaac aacatgccac acgccaccat ccccgacatg gaaattgcca ggcccaaccc
     2641 tttcatatta atgaaggtgg caaaatttgg gacaaaaatg gcacaggcga taaagagcac
     2701 cgcaaacacc accagcatgc cgtactgatc ccagatacgc ccgaagctga atgacgactt
     2761 aggtgcgcca gaacccgatg tagaaacaga agacatcata ctctccttac tcaggcaact
     2821 gcctggctga ctttaggcat cgcaaggctc agtgcctgac gctcatctgc ctgctcgtgt
     2881 aacaattcac cggcgattgc accttcccgc atcaccacaa tccggtcggc aacgccgagg
     2941 acttcaggta agtcgctgga ggcaaacagc accgccacac cctgcgccgc cagcgcataa
     3001 attacgttat atatttcgtg cttagcacca acatcaatgc cgcgcgtagg ttcatccagc
     3061 aaaatgacct tcatctcttc cgataaccag cggcccagaa tggctttttg ctgatttccg
     3121 cctgagagat tcatgatcag ttgctcagcg cccggcgttt tgatgttgag cgaacgaatg
     3181 tgctgatcgg cattgttttc ttcccaaccg ttgttgatta cacaaccgcc gagcacatgt
     3241 ttgcgtctgg cactgatgtt gatattgtcg cgaacggagt gcacgggaat aatgccttcc
     3301 gctttgcgat cttccgggca gagcatcatg cctgcggcaa tggcgtggct cggtttacga
     3361 atatcgatcg gctgttggtc gatataaacc tgaccggcgg tgatttgcgt cccgccaaac
     3421 aagcctttca ttaattcgct acgccccgcc cctaccagac caaacagccc aacaatttca
     3481 ccactgcgaa ccgccagact tattggcgta cgcacgcctg gtgctttcac agcatcaaga
     3541 cgcaggcgct cctcgccata actacgaggt tgccagccgt agatatcgcc aatgtcgcgc
     3601 ccgaccatcg cctgcaccag cgcgtcgtgg tcaacctgct gcatatcggt aaaggttttg
     3661 acataacgtc catctttaaa gacagtgatg gcatcgctga gggcaaatat ttcttccata
     3721 cggtgagaaa cgtataagat cacccgcccc tcttttcgca gttcacgaat aacgcggaaa
     3781 agattgtcga tttcgcgggc agaaagggag ctggttggct catcaaaggc gataatttta
     3841 gcgttacgcg ccagcgcctt ggcgatttca accatctgcc actgaccaat ggagagatat
     3901 ttcagcggcg tgtccgggtc aatatccata ccaagatgtt taagttgtaa acccgcctca
     3961 taattcagca atgagcgatt cacaatgccg cctttatgcg gcagctggcc gagatagatg
     4021 ttttccgcga cggtcatttc cggcacgaga tgcagttcct ggtaaataat cgccacaccc
     4081 gcgttaagtg ctgcggtcgt gtcggaaaag gacatttcct gcccattaat cactacagaa
     4141 cccgtggttg gcgcatagtt gccgctgagg atttttaaga gagttgattt tcctgcgcca
     4201 ttttcaccca tcaacgcatg aacctgaccg gcatagcagt caaaactaat atccgtcagc
     4261 gccttaacgc cgggaaacgt tttaccgatg ccgcgaaatg agagatacgg ggtagactgt
     4321 tgcataacgt ctccgtgaat cactggtcgt tcacaccccc tctgcatcat gcagagggga
     4381 atttttccgg caaattactt accgcctaaa ccttttttct ccagttcttc tttaaagttg
     4441 tcacgcgtga tcagcaccac gtcggtaact tcggtaaatt ttggcggttc aacgtctttt
     4501 gctacccagt tgtaaagcat ttcgctggat ttatagccat gtacgtccgg gcttggcagc
     4561 agggaaccgt agaagccggt tgcctgtact ttagacagtt cgctcaccgc atccacaccg
     4621 ttaatgccaa tgccgataat atcggcagct ttaaagccct gaccttccgt cgcgcgtacg
     4681 ccgcccagca cggtgctgtc gttcataccg acgatcagcc aatgtttaac ttcaggatgt
     4741 tgaaccagca ttgagttggc agcgtcaaat gcccccggga tgtcgttaga tttggtaggt
     4801 acctgataaa tttgtttttc cgggaatccg gccgctttca gcgcatccat agatcccgta
     4861 gtacggcggc gggcagtatc cagttcgttg gcggtaatca ccatcaccgc gctttctttg
     4921 acatcccagc cacgtttctg catctcttta tacagttcct gaccctgacg ttcgccaatt
     4981 ttagtcgcgc catcatcacc agcggaacgg tatccattgg cttacctttg gcgttaacaa
     5041 actgatcatc cacggcaatg actttcatat cgtagccacg cgctttcgcg acgatggcag
     5101 agccgagttt ggggtccgga gtacaaataa cgaaaccttt tgcgccactg gcagccaggc
     5161 tgtcgatcgc gttcaatgtt ttttcgccat ccggcacggc aatcttaata acctcaaacc
     5221 ctaaatcctt cccggcttta tcggcaaact tccattcggt ctggaaccac ggctcttccg
     5281 gttgcttcac cagaaaaccg agcttcaggt tctccgccat agcggattgt gacataacgg
     5341 ctgccagacc aatggctgcc agggctttag taaatttgtg catggttctc tccagcttta
     5401 gtgtcgtttt gtgtagggca aaaacgaatg acattcgtta aattaatcgg aaaacaaagc
     5461 attacctttt aactaaaaga taagtgaccg tgttgacata gttttagcga gaaattaatt
     5521 ctccatagga gagcaatatc acatcgcaga attacagtga gaacgtgcat aaatttagcg
     5581 ggaaaagaca taagggaaag ccaatttgtc agacaaattg tcgaatgcac agcagattaa
     5641 tccataagat tagcttggaa atccttgttg tctttggtac ccatgcggga tgtcttcttt
     5701 ttaaccagtc aataggccgc attacctggc gttgagtttt tgaaatggtg taataaccgc
     5761 aactcaaaga tgtggaaaat gcacgtcatt catttcgcca ttaattatca ctgtgctcat
     5821 taattaacag aacacgtata atgagagcca tctcgcaaaa atgaaaaaac gttttataaa
     5881 atcatcattt catcaatgaa atgtaaaaat atataaactt gatgatttaa gcattttctt
     5941 atacccgttc agacgttatt cttatttcag atcatcgtca gaattgactc cacgatcaca
     6001 tttcggaccg gcagaaagga attattctgc aaacagtaat tatggtgttt tgatttatct
     6061 tgcacctctc cacttctgga tataaggata ttaggtatgg caaccgctgg aatgcttctc
     6121 aaactcaact ctcaaatgaa ccgcgagttt tacgcatcca atctctacct tcacctgagt
     6181 aactggtgtt ctgaacagag tctgaacggc accgccactt tccttcgcgc ccaggcacag
     6241 agtaatgtga cccaaatgat gcgcatgttt aactttatga agagtgtcgg cgctaccccc
     6301 atcgttaaag ccattgatgt tcccggtgaa aaactgaact ctctggaaga actgttccaa
     6361 aaaacgatgg aagaatacga gcaacgttct agtacgttgg cacagttagc cgatgaagcg
     6421 aaagaactga atgatgattc aaccgtcaat ttcctgcgcg atctggaaaa agaacagcag
     6481 catgatggtc tgttgctgca aaccattctt gatgaagtgc gcagtgcgaa acttgctggt
     6541 atgtgcccag tgcagaccga ccaacatgtt ctgaatgtcg tgtcgcatca gctgcattga
     6601 tcatacatcg gcgctaatgc attgcgccga tgaagttttt gagaaaccgc tgcctcatct
     6661 ttttgaagca gcggtttttt aatgggattc gccttgtggg gtaaacttga gttcaatcag
     6721 cgcgatggct ttttggattg cccgcatggt gaccgggtct gcggcggcgg gatggttact
     6781 aaagtcgata ttcttcagct gactggacat tttttcacga acttcaacgg gcgcgattac
     6841 atcgagaaca tccagaattt gtttgataac caactggcaa gcaaccacat cagaaaccag
     6901 ttcctgatcg gcattcagcg gctgggacat cgtaaactcc tgatagcatt ttgaaaaccg
     6961 ttatagtagc ggcttcacat cttcagcgat agtcacatcc accgtcatca ggacacaaaa
     7021 aaacctgccg gagcaggttt tttgttatcg gaacatattg cctggcggta cgtctttgaa
     7081 cgtcttgcaa tagttattga acatactttt caggattttg cgcagtttca tcgcggcact
     7141 ccgaccattt gttatacatg tgttattttc tttgtgctta taatatgaca accatcacaa
     7201 aaatcaatct ttatgtgatg caaatcacac aaataccccc ttaatgttat aaaaatgata
     7261 atcaaaaaac agccccccca tttctgacac ctacagatgg caagaaatag cgcctgccag
     7321 gcgtcttttc cggtcattgt cgcagcgctg taacgcgtaa aatagtgctt tcttttactc
     7381 ttctggctgg accatgagac ttctgattct gactctttca ttaataacgc tggcggggtg
     7441 tacggttact cgccaggccc atgtgagcga agttgacgcg gcaacaggta ttgtacggtt
     7501 ggtttatgac caggcttttt tgcagcatgc ccataccgat cgttatgtca gtcgcgggat
     7561 cgccgatcgc gcatgccagc aggaaggcta tacccacgca atcccctttg gtcagccagt
     7621 aggcaactgt agcctttttg cgggttcctt atgtttgaat acggaattca ctttgtcata
     7681 tcagtgccat cattccgcct tccctgtctt tctctaaata ttttaatcag cgaggggatc
     7741 ttcgctgatt aaaaaaatag cggtaatgcg ttttattccc attcgtattt ttaataattg
     7801 aagtttatat tttacctttt gcaaataata aaataacaaa ttatagtgac gccacagcaa
     7861 caaatataac ctttgtggag cactatcatg ctgaaaccag aaatgattga aaaacttaat
     7921 gagcagatga acctggaact gtactcttca ctgctttatc agcaaatgag cgcctggtgc
     7981 agctatcata ccttcgaagg tgctgccgcg ttcctgcgcc gtcacgccca agaagagatg
     8041 acgcatatgc agcatctgtt tgattacctg actgataccg gcaatttacc gcgtattaat
     8101 accgttgaat ctccgtttgc tgaatattcc tcacttgatg aattattcca ggaaacctat
     8161 aaacacgaac aattaatcac ccagaaaatt aacgaactgg ctcatgctgc aatgaccaat
     8221 caggactacc caacatttaa tttcctgcaa tggtatgttt ctgagcagca tgaagaagag
     8281 aaactgttca aatcgattat tgataaatta agcctggcag gcaaaagcgg cgaaggtctg
     8341 tattttatcg acaaagaact ctctaccctc gacacacaaa actaatactc tccggcggca
     8401 ggtttactgc cgccgtttca aatcagtgac ggcaaatctt actctgatcg gtcgaaaaac
     8461 cgtctttcga aggtataaat ttgccttttg ctgccagaaa cgctaccagc tctcccgctg
     8521 tcatcccttc tgccgagcag gtgtgaaaac gtgcctgttc accaaaacgc gctttaattg
     8581 ctgcttccag actggcatgc gtatattgct cgcctgattc aatcatcata tttaacactt
     8641 catgaccgtg aatagagtcc atcgttcctc ctcaaaaaaa gcctagcgta gcgattgccg
     8701 cttatgaaga ctttgcgcca gagcagaact gaatgctttt tattgtacat ttatatttac
     8761 accatatgta acgtcggttt gacgaagcag ccgttatgcc ttaacctgcg ccgcagatat
     8821 cactcataaa gatcgtcagg acagaagaaa gcgtgaaaaa cagaactctg ggaagtgttt
     8881 ttatcgtggc gggaaccaca attggcgcag gcatgctggc aatgccgctg gctgcggcag
     8941 gtgttggttt tagcgtcacg ttaatcttgt tgattgggct ttgggcgttg atgtgctaca
     9001 cggcgctatt actgctggag gtgtaccagc atgttccggc agataccggt ctgggcacgc
     9061 tggcaaaacg ctatctggga cgctacggtc aatggctgac gggcttcagt atgatgttct
     9121 taatgtatgc tctgactgcg gcatacatca gcggtgccgg tgaattgttg gcctccagca
     9181 tcagcgactg gacaggtatt tcaatgtcgg caaccgctgg cgtgctgttg ttcacttttg
     9241 ttgccggtgg cgtggtttgt gttggaacat cgctggtcga tttatttaac cgttttctgt
     9301 tcagcgccaa aattattttt ctggtggtga tgctggtatt gctgctaccg catattcaca
     9361 aagtgaatct tttaaccctg ccgttgcaac aggggctggc tctgtcagca atcccggtga
     9421 tttttacctc atttggtttt cacggtagcg tgccgagtat tgtcagctat atggatggca
     9481 acgttcgtaa gctacgcagg gtgtttataa ccggtagtgc gatccccctg gtggcatata
     9541 ttttctggca ggtggcaacg cttggcagca ttgattcaac aacctttatg ggattgctgg
     9601 ctaatcatgc tggattaaac gggctgttac aggcgttacg cgaaatggtg gcctctccgc
     9661 atgttgagct ggcagtgcat ttatttgctg atttagccct cgccacgtca tttctcggcg
     9721 ttgcgttagg cttatttgat tatctggctg atttatttca gcgttcaaat accgttggtg
     9781 gacggttgca aactggtgca attacctttc tgccgccgtt ggcgtttgca ctgttttatc
     9841 cacgaggatt tgtgatggcg ctgggttacg ccggtgtggc gctggcggta ctggcattga
     9901 ttatcccttc gctgttgacc tggcaaagca gaaagcacaa tcctcaggcg ggttaccggg
     9961 tcaaaggtgg tcgtccggcg ctggtggtgg tgtttctctg tggtattgct gtgattggcg
    10021 tgcaattttt gattgcggca gggttgttac cagaagtgag gtgatcagat agcctcaaat
    10081 tccttattgg gtgccagaat taacgctgac acccaatttg gcctcttaat gcaggcagca
    10141 ctgcttaaat ttcttaccac taccgcacgg gcaaggatcg ttacgccccg gtttctcttc
    10201 tgctttgatc ggttgctgaa cagctttttc ctgcggatgc gccatccagt acgcatgtag
    10261 atcaagcgcc gccagtcgaa tggcatctac gctctcttca aacgcttctg gcgacatctt
    10321 ttctacccgc tcgaagtttt cctcagtacc gtgcagcgca atcgcctcca gcgctggttt
    10381 taacgaatcg ggcaacgttg accagtcaga aagtgccacg ccccgcatat agccaaagca
    10441 ccactcctca acaatcgtca gctcgctgcc atcaacttct cgcaagccga ataacggctc
    10501 aaactgctcc gggaattcgt tcagacgctc tgcggtatcg gccatatgtt gaaaagccag
    10561 gttcataaag cgcgtcatct ctttctctga cgcccagcgc ggcacatagt cagccccacc
    10621 ccacacggca accagccact gttccggttc aatctcttgc ggagaactca acaccgccgt
    10681 caataaatcg tccagctccg ccacatcaag gatggcgtgg ttagtgttgt atttggtcag
    10741 aatatcgtcc agccattcca actcactttc gtttaacggt cccgttttca tacgcttttc
    10801 cttgtggatc tcaactcgcc agcacctatc ttacatgccg gtccgtatca gagatacttt
    10861 ttgagtggct ttgccggtga ttaaaaatta aggagggtgt aacgacaagt tgcaggcaca
    10921 aaaaaaccac ccgaaggtgg tttcacgaca ctgcttattg ctttgatttt attcttatct
    10981 ttcccatggt acccggagcg ggacttgaac ccgcacagcg cgaacgccga gggattttaa
    11041 atcccttgtg tctaccgatt ccaccatccg ggctcgggaa gaaagtggag gcgcgttccg
    11101 gagtcgaacc ggactagacg gatttgcaat ccgctacata accgctttgt taacgcgcca
    11161 aattcttcag gcctttcagc cagacatccg cttgacgccg atgtctttta aactggagcg
    11221 ggaaacgaga ctcgaactcg cgaccccgac cttggcaagg tcgtgctcta ccaactgagc
    11281 tattcccgca ttcattaagc aatcagttaa tcacttgatt ttattatcgt ctggcaatca
    11341 gtgccgccgt tcgatgcgtt gcattctact tacctggcgc gatgagtcaa cgatattttt
    11401 caccactttt gatcgtttgc tgaaaattac gccgaaacga tcactgatca agcaaatctg
    11461 cacgcgcagc gctcaaatat tgcaacattg accacagagt cagcaccgca gccacaaaga
    11521 aaagtgcaat accggcgtac tcaacccaaa tgttcggacg ccacagcagc caggccaacg
    11581 ccaccatctg ggcagtggtt ttcactttcc caatccagga gacagccacg ctactgcgtt
    11641 tacccaactc cgccatccat tcgcgtagcg cagaaataat aatttcacgg gcgatcatcg
    11701 ttgccgccgg tagggtcacc caccagctgt gataatgctc ggttaccagc accatggcga
    11761 tagccacgag aactttatct gctacagggt caaggaaagc accaaaccgg gtactctggt
    11821 tccagcggcg tgccagaaaa ccatcgaacc agtcagtcac cgccgcgccg cagaaaatga
    11881 gcgcggcggc aaacggcgac caggtgacag gcagataaaa gaccaataca aagaatggga
    11941 taaggatgac acggaacagt gtaagcaacg tagggatatt aaattgcata atgacgggta
    12001 actatctgtt gtcagtaaga ttacccctat gttgctacag agacatcaat gtttcaacga
    12061 ccagaagatc ttttctgcca gaccttgcga aatacccggc acttttgcaa tttcctcgac
    12121 gctggcgtta cgtaaacctt gcaaaccgcc catatatttc aacaacattt gccgacgttt
    12181 tggcccgacg ccttcaatgg tttccaggga actggtattt ttgaccttcg cccgtttttt
    12241 acggtgcccg ccaatcgcgt gatcatgtga ttcatcgcga atatgctgga taacatgcag
    12301 cgcgggtgaa tctggcggca aactaaatcc ctcatcttcc ggctcaaaga acagcgtttc
    12361 cagtccagcc ttacgatctg ctcctttggc aacgccaagt agcagcggat gatttttatc
    12421 ccatgagaca tccagttcgg cgaagacatt tttcgcctgc gcaagctggc ctttgccgcc
    12481 gtcgataagg atcacatccg ggatcttact gtcgtcaatg gctttaccat aacgccgacg
    12541 cagcacctga ttcatcgccg cataatcatc gcccggcgtg atgcctgtaa tgttatagcg
    12601 ccgatactcc gcacgcagcg ggccgttagc atcaaacacc acacaggaag cgacggtttg
    12661 ttcgcccatg gtatggctga tgtcaaagca ctccatccgc ttcacttccg gcaatttcaa
    12721 cacgctggca agcgcggtca gtcgctggtg aacggtagat tgctgcgaaa gtttgctggt
    12781 taaggccgtc gccgcattgg tgcgcgcgag tttcagataa cgcgccctat cgccgcgagg
    12841 tttggtttga acattaatct tgcgtcccgc cagttctgaa agggaatcgg cgagcagcgt
    12901 tttatcgcta agattaaaat cgagcaggat ctcacccggt aaggtgcgca tctggctgcc
    12961 ttgtaaatag aactgaccta cgaaggtttc taccacctcg ctcagttccg taccgccagg
    13021 cactttcggg aaatagctgc ggctgccgag cactttgccc tgacgaatga acaatacgtg
    13081 gacacaagcc atgcccgcat cgaacgccac accaataacg tcaaggtcgt cgccggtatt
    13141 ggaaacaaac tgtttttcgg tgacgcgtcg caccgcctga atttggtcgc gaatacgtgc
    13201 cgcttcttca aactccagat tctgactggc agtttccata cggctaatga gttgcgtaag
    13261 cacctgatca tctttgccag acaaaaacag gcgcacatac tcgacctgct gagcgtattc
    13321 ttcttcactc accagtcctt caacgcacgg tcccagacag cgccctatct gatattgcag
    13381 acacggacgc gagcgattgc gataaacact attttcgcac tggcgaatgg ggaaaatctt
    13441 ttgcagtagc gccagagttt cacgtacggc atagccattc gggaacgggc cgaaatattc
    13501 acctttggca tgcttcgcac cacgatgcat cgccagacgc gggtgggtat cgccactcag
    13561 gaagataaaa ggataagatt tatcatcgcg tagcaaaacg ttgtaacgcg gctgatagag
    13621 tttgatgtag ttgtgttcca gcaacagcgc ttcggtttct gtatgagtaa ccgttacatc
    13681 aatttgctga atctgggcga ccagcgcttc ggttttgcgc gaagcgaggt tgctacggaa
    13741 atagctggaa agccgttttt tcaggtcttt cgctttgccg acatagataa ccgtaccacc
    13801 agcatcgtac atgcgataaa cgcctggctg gctggttacg gtttttaaaa acgcttttgc
    13861 gtcaaactga tcactcactg acttgataat gtctccgcat tacacagacc atggcgaatt
    13921 gccaggtgag tcagctcaac atcgccatga atgtttagtt tactgaacat acgatagcgg
    13981 tagctgttca ccgttttcgg actgagattg agctgttctg agatctcatt gaccttctgg
    14041 cccttggtga tcatcagcat aatctgcaat tcacgttcag acaaactggc aaatgggctt
    14101 tctgtttttt ctggttcgat ctggcttaac gccatttgtt gagcgatgtc agaagcaatg
    14161 taacgctgcc ctgaatagac agaacgaatc gcactcacga cttcctgcgg agccgcgcct
    14221 ttgctgaggt agcccgcagc accggcctgc atgactttcg ctggtaaagg gttttctgta
    14281 tgaacggtaa gcatgatgat tttgacatca gctgtggaac gcgcgatttt acgcgtcgcc
    14341 tcaagaccgc caatgcccgg catactcatg tccattagca ccacgtcaac ggcatttgtc
    14401 cggcaccact taacggcgtc ttcaccgcac gatgcctcac cgacgacttt tatacccttt
    14461 atatcttcca gaatgcgtcg tatccctgcg cgcaccagtt cgtggtcatc aacaagtaga
    14521 acgttgatca aagaaatatc tccagaaata gggataacgc tactgatagt tagtcattcg
    14581 tatattagcg gtttttattg caactttgaa acgttaaaaa tggtgggtat tcgatttttc
    14641 tctcgttttt gtcaattcga ttgtccacag ttatggtcac gcccgtcacc aacggcttac
    14701 cggatcgttt cacagtaagc cctacgatga aatgtgacaa aaattgactt tattcagcaa
    14761 aaatgaaaat cagcccgctg aatatgtaac attaattaac ccgaacaata cgggcaaaaa
    14821 cattcatgat aaaaatattt attggtcatt atattaacgt attttatagc actgccgata
    14881 tcacgctcaa aaaacaacca ctgctatttt tagcaaagct tatggtatac tccgccgcct
    14941 taacattttt caccgcaaat tttcattgca acatgacgag gaaaataaat gagtacgcct
    15001 gatttttcta ctgccgagaa taatcaagaa ctggcaaatg aagtctcctg cctgaaagcg
    15061 atgctgacgc tgatgctgca ggcgatggga caagctgacg cgggccgcgt gatgttaaag
    15121 atggaaaaac agcttgcgct gatcgaagac gaaacccagg ctgcagtatt ttccaaaacg
    15181 gttaagcaaa ttaaacaagc ctaccgtcag taatataaaa ccggctgaga gcgtgccttt
    15241 cagccggttt ttgcatctgg cacgcagaaa gaaaagcgat caaattaagc cagtagcggc
    15301 cgcgtaacag gccacctggg tcttatttgg tgcattgatt tttttctgca tgtttttctg
    15361 atggaaattg accgtattct cagagattga caaaatcatc gctatctctg ctgatgtctt
    15421 cccttccgcc gtccatttca gaatttcttt ttcgcgcttg ctgaaattca tctctggcgt
    15481 catcactatt tcatcattta aacgcatcag agccatcaga ctttcgcgca ccagtaactg
    15541 catttttaat tgcagttcat cactaagaat gggtatttcg cgcgtgctgc aacgggaaaa
    15601 ggacaaaaag cccagcgccc gatttggcag cattaaatac tgagtgacac cgcggcgtaa
    15661 accatgtgcg tgcgcggctt cccataatgg ctgtgcttcg ctgaataagt catcattcca
    15721 cattaaatgg ccctgactaa agttttcagg gttcagcaca ggatcaattg cgagaaaatt
    15781 ttttgcctga taataactaa cccacgactc agggtaattg gtgtagaaag ccactttagg
    15841 tcgcgtgaat ggtaccgggt ggcgaacaca taacgaatag taatcgtact ccagctgctg
    15901 agcctgaagc tctatttcat ggtagacctc ttctgcggcc tccatcctct gaaaacgcaa
    15961 cagcatcgtg cgacgccaac tgaaaaaatc cgtatcctgc atagtaaacc gcaacgcccc
    16021 tgagagtgag tatcatttat aatgataatt caaactatca cataaataag atttatatat
    16081 aatttatatt attcaggcaa tgaattactt ttgcaagcca tcgcattctc ttatgttatt
    16141 aatgagttat gctgatttgt taagcagttt tatcacgctt gaaatggcgt cccgccccga
    16201 caggtgaatc gtcggggctg attttttctt attattgcag cagaaacttc tcgaggaact
    16261 gtcgggtgcg aggctgctgg ggatcggcaa ataacgcttt tgctgccccc tgctcgacta
    16321 tccgccccag gtccataaaa atcgcccggt ccgcaacatc ccgggcaaag ctcatttcgt
    16381 gcgtcacaat caccatcgtg cgcttttcct gcgccagctg gcggattgtg ttcaggactt
    16441 cgcccaccag ctctggatcc agcgctgacg ttggctcgtc aaacaaaatc acctcaggac
    16501 gcattgccag cgcacgcgca atcgctacac gctgctgttg accgccagac aaacgacgtg
    16561 gatagctggt ttctttaccg gccagcccaa ctttcgccag cagctcgcga gcgcgcgccg
    16621 tggcctcttc tttcggttcg cctttgacga tcaccggccc ttcaataatg ttttccagca
    16681 ccgtacgatg cggaaacaaa ttaaagttct ggaagacaaa cccgacgtgc tgacgcaact
    16741 ggcgaatcag cgatttttgc tgacttaatg aacgtgcagt atcaatagtg atatcgccaa
    16801 cggtgatcgt tcccgcttcc ggttgttcca gcagatttat gctgcgtagc aacgtggttt
    16861 tgccggaacc actcggaccg ataattgcca ccacttcgcc aggctttacc tcgaggtcga
    16921 taccgtgcag caccgtctga ccttggaatt ttttcaccag gttcttaact tcaatggcac
    16981 tcatttgggt tctctctcct ggcgattaag ttgattctca aaatggttct gcaacgtcga
    17041 taacacagtc gccatgatcc agtagatgag cgaagccgcc aggtacatgg tgaacacctc
    17101 cagcgtgcgc gaggtaatca actgcgcctg acggaacagc tccggcacct ggattgtcgc
    17161 ggccagcgac gtatctttta ccagactgat aaagctgttc gacagcggcg gcaacgccac
    17221 ccgcgccgcc tgtggcaaaa tcgcgcgacg catggtctgc cacggcgtca taccaatact
    17281 ggcagcggct tcccactgac ctttatcaat agaagaaatg gcggcgcgca gcgtttcggc
    17341 ggcataggcg gcagtgttca gcgacagacc aatcattgct gacagaatgg gatctaattc
    17401 gataccaaac tgcggcaggc cgtaatagat cataaacagt tgtgcgatga gcggcgtacc
    17461 acgaaaaata gagatataaa aacgcgccag ccagcgcacg ggccagattg gcgacaggcg
    17521 catcagcgcg agaataaacc cgagtagtaa gccaaaaaac atgccgccga tactgagttg
    17581 cagggtatac ccagcccctt tcaacaggaa cggcaaggaa tcaataacca gttgtatact
    17641 ttcttgcatg agcgttcccg gagctaaacg tggggatgat aggcgaacag cgcaggcgcg
    17701 ccgccggtat gaataaacag aatcggccct tcatctttga agcgtttctg actgataccg
    17761 tcaatcagcc ccgccatcgc ttttccggta tacacaggat caagcagaat gccttccaga
    17821 cgcgccagca atttcactgc ttccatgcct tcgtcgttcg gcacgccgta gccaggtgca
    17881 aaatagtcat cccagagtaa aatttccgct gatgcggtca gctccagttc tttcgcaatc
    17941 gcctgttgta ggttaaccac tttcggcaat tgatcggcaa cggaacgcga cacggtcacg
    18001 ccaatcagtt cgctttcagg catcaggtgt tccagcccaa cagccaatcc ggcgtgagtt
    18061 ccggcactgc ccgatgcgac caccaccgac gaaatattaa ccgccccttc acactgttgc
    18121 gcgatttcca gcgcactctc cacataaccc agcgcgccca gagcattaga accgccaacc
    18181 ggaatgacat acgggcgaaa gccttgtgct tcgactcgcg tcgccagctc ttccagttgg
    18241 gcattgggat cggtcagtgc gtcgcacatt tcaatctggg tattgaacag attcagcaac
    18301 aaacgattgc cgttggttaa atagttttct gcggttgtgc caataggatt ttccagcagc
    18361 gccacgcagt gcaggccgag tttcgccgca actgcggcag tctgccgcac atggttagac
    18421 tggatcgcgc cggcagtaat cagcgtatcg gcaccttcgc gcagggcatc tgccgcgaga
    18481 aattccagct tacgtaattt attgccgccc attgccatgg gtgtgacgtc atcccgtttg
    18541 atgaaaattt cccgtccaag ataatcagaa aagcgcggca gatattcgag cggcgttggc
    18601 gcgccgataa actccagccg tggaaaacgg gttaaattat gcagtggcat aatagcctcc
    18661 gatgtgtgtt gttgtgattt tcttattatg cacgctgaaa acgcgtaaat aaaaaaggcg
    18721 ctagtgaaag cgcccttttt tgtcattatg ctgattattt ggtcacatca gcaccaaacc
    18781 atttttcgga aagggcttgc agagtgccat ctttttgcat ttccgcaatt gcatcgttca
    18841 ctgctttcag caggtcttca tttcctttac gcagcgccac gccagactcc tgacgggaga
    18901 atgcttcacc ggttactgcc agcgtatcgt tggttttctt caccagatcc agcgccgcca
    18961 gacggtcaac gaggatcgca tcgatacggc ctacgcgcag atcctgatat ttggtcgggt
    19021 catcatcata ggtacgcaca tcgacgccct gaacattctg ccgcagccac tcttcatagt
    19081 tggtgcccag accgacaccc acttttttgc ctttcagatc agcagccgtt ttaatggtgc
    19141 cttcgttacc ttttttcacc agcgcctgaa taccagaaat ggtgtacggg gtagagaaat
    19201 cgtatttttt cttgcgctca tcagaaatgg tgacctgatt aatcaccaca tcaatacgtt
    19261 tagagtccag cgacgctagc ataccgtccc atttggtcgg ttttagtgac gcctcaacgc
    19321 caagatgttt tgccagctgt tgggcaaatt ccacttcaaa accggttaat ttgccgtcat
    19381 ccccctgaaa actgaacggc ggataagttc cttccagccc taccagtagc gtaccgcgct
    19441 ctttgacttt attaagcaga ccttcatctg caaaactttt aacgctcatg cccgcaacca
    19501 gcgccacggc catcacaccc atcaatgcct gacgtcccag atgtgctaat ttcatattca
    19561 ccccgaatgt tgttatgtct gtttgcagtg tagagccatt gtttgtaaac acaaaaacaa
    19621 ctccgctaca tcttattctt atttaatata tatcagaagc aggcaggctg gaggatttct
    19681 gcacaagtcc ggtacacgtt tgacgctgat agtgttgata cttccgtaat gcgatgcggt
    19741 aattgttggt gctggtggtg ggcagccacg gggcgaggat ttcatcaagg aaaccgtcct
    19801 gcagctgatc gagggaaata ttttgctcat gtagatgatt ccccaaacgg cgcaaacgaa
    19861 cgacatattc acgcaccgta cctgggctca tttcagtttg ctcaaaaaga aattgcttaa
    19921 agccgataat atcgaaaaaa tcactctgcg ttttgcaatg taaatcaccg caaaatcggc
    19981 acaatgccgc ccatgactgt tgttccactt gccagccatt ttcatcaagc agcgtgtcca
    20041 ggcgggaaat ctcgatttta ttcactattt tgccgtcgcg aactaaggta atgcgatcga
    20101 gtaatttacg gcaatgcgcg caatgggcct ggctgtgttt aaagtcttta agatagcggc
    20161 ttaatggccg tcttttcagg tgctgcacca tcattaagaa ctcctggtag tcaaagttaa
    20221 agtgcggcat ttactgacgt tataacttac ccagtttagt gcttaaccgt ttaatggcct
    20281 ggctgtgtaa ctgactgacc cgcgattccc cgacctccag caccgcgcca atctctttga
    20341 gattcagctc ttcctggtaa tagagggtta ataccagttt ttcgcgctcc ggcaacgttt
    20401 cgatagcttc catcacccgc tggcgcagat tactgtccag cagttgttgt agcgggtttt
    20461 ctcgctgatg atcatcagta accagttcga tgctatcgcc gtgctcttcg cgccactcat
    20521 cgtaggagaa aagctggctg ttattggtgt cgagcaacat ttggcgataa tcggcaatat
    20581 cgatccctaa acgttccgct acctcagttt ccgtggcgtt gcggccaagt tcctgctcca
    20641 gttgccctat tgcctgtgcc acttcacgcg cgttgcgtcg cacgctgcgc ggcacccagt
    20701 cacggctgcg aagttcatcc agcatagcgc cacggatacg ctgcactgcg taagttgtaa
    20761 atgccgttcc ttgtagggcg tcatagcgtt cgacggcatt aagtaaccca atgccgcccg
    20821 cctgtagcag atcgtcaagt tccacgctcg cgggcagtcg aacctgcagg cgcaatgctt
    20881 cgtgacgcac cagcgggaca taacgctgcc acagcgagtg tttatccatt acaccttcag
    20941 cggtatagag tgaattcacg ataaacagcc ctgcgttata tgagttatcg gcatgattat
    21001 ccgtttctgc agggttttta atcggacgat tagtgggtga aatgaggggt tatttggggg
    21061 ttaccggtaa attccatgca gaaaaaaccc cgccggtggc ggggaagcac gttgctgaca
    21121 aattgcgctt tatgttgccg gatgcggcgt aaacgcctta tccggcctac aaaaatgtgc
    21181 aaattcaata aattgcaatt caccttgtag gcctgataag tgcagcgcat caggcaattt
    21241 ggcgttgccg tcagtctcag ttaatcaggt tacgacgatt aaccctgcag cagagacaga
    21301 acctgctgcg gtacctggtt ggcttttgcc agcacggagt taccggcctg ctggatgatc
    21361 tgcgctttcg acatgttgga cacttcggtc gcatagtcgg cgtcctgaat acgggactgc
    21421 gcttcagaca ggttggtagt ggtgttgttc aggttggtga ctgcagaatc cagacggttc
    21481 tgaatagcac ccagggatga acggaatttg tcgatggagc tgatagcttc atccagggca
    21541 gccagaggat ctttggttgc agtgcctgca ctggtggttt cagtggtcag tttgcctgta
    21601 gagttaacat aagcctgtgc cccaacagta gctgcaaatt taccagttgc acctgcgcca
    21661 tttgaagcta cagttactgt accggtatcc ttatcgacgt tgtagttgat agtgtaagat
    21721 gcggttgtgg tgagctcttt gtctgcatca gtataggtgt cattcgaatt accagcacca
    21781 ttagtattcg caccaccgaa ggacgccgtt gcagactgaa tacctgtatt atacttaatt
    21841 gtcgcaccag taactgctgt gttagccgtt gcagcactct gcactgtgct cagtacagta
    21901 tcagcgctta cagttttggt gtaggttacg ccagaagttg ccgctgcacc aaagttataa
    21961 gttgtgccag acaactggat agaaccagtt gtcgctaagg tactaccgct agcaaacaga
    22021 tcggacaatt tcgctgaaga tgcaatgccg gcgttgtttg tagataggtt accagtggcg
    22081 tccaggtacg cggctttacc accgatggtc acatcgccat tagcatctac atcaaacttc
    22141 acatcaccag tactacgagt ataaacacct gatgcagtag tgccagccgc tggtttcaga
    22201 gtattcgcaa agttaacaac atcgccatct gcaactgttg cttgagtggt gaagttccct
    22261 ttagccgcat cataagtata gatcgcagca ctcgagccag tagtagtaac tgtatctccg
    22321 gttttcaggc gagacagtgc atcgctagcg ctgagtgctg tattgtttgt ggtcacagca
    22381 taaggacctg ttcccgttgc accagcagcg gtcagatcgc tgactgtagc agctttgttc
    22441 gcaatagtgc ctttgccatt cacgttaaaa ccattcagcc ccagcgtatc tgagtcaatt
    22501 ttcttcagat caatcgtgat agtctggccg tcattcgcac caacctgaat tttcattgaa
    22561 ccgtctttcg ccagtacgtt cacgccgttg aactgggtct ggccagatac gcggtcaatt
    22621 tcgtccagac gggatttgat ttcgtcctga atggagtcca gatccgaatc ggagttagtc
    22681 ccggtagaag cctgaaccgt cagttcaaga atacgctgta agttgttgtt gatttcggac
    22741 agcgcgcctt cagtggtctg cgcaacggag ataccgtcgt tggcgttacg ggccgcctga
    22801 gtcaggcctt taatattaga agtaaaacgg ttagcaatcg cctgacctgc ggcgtcatcc
    22861 ttcgcgctgt taatacgcaa gccagaagac agacgctcga tagaactcga cagcgcagac
    22921 tggttcttgt tgatattatt ttgagtgatc agcgagaggc tgttggtatt aatgacttgt
    22981 gccatgattc gttatcctat attgcaagtc gttgattacg tattgggttt ccacccgtcg
    23041 gctcaatcgc cgtcaaccct gttatcgtct gtcgtaaaac aacctttaga atttttttca
    23101 caaacagcca ttttttgtta gtcgccgaaa tactcttttc tctgcccctt attcccgcta
    23161 ttaaaaaaaa caattaaacg taaactttgc gcaattcagg ccaataaccc cggtattcgt
    23221 tttacgtgtc gaaagataaa aggaaatcgc atggcaagta tttcatcgct gggagtcggg
    23281 tcaggtctgg atttaagttc aatccttgat agcctcaccg ccgcgcaaaa agcgacgcta
    23341 acccctattt caaatcagca atcgtcgttt accgctaaac ttagcgccta cggtacgctg
    23401 aaaagcgcgc tgacgacttt ccagaccgcc aatactgcat tgtctaaagc cgatcttttt
    23461 tccgccacca gcactaccag cagcaccacc gcgttcagtg ccaccactgc gggtaacgcc
    23521 atcgccggga aatacaccat cagcgtcacc catctggcgc aggcgcaaac cctgaccacg
    23581 cgcaccacca gagatgatac gaaaacggcg atcgccacca gcgacagcaa actcaccatt
    23641 caacaaggcg gcgacaaaga tccgattacc attgatatca gcgcggctaa ctcatcgtta
    23701 agcgggatcc gtgatgctat caacaacgca aaagcgggcg taagtgcgag catcattaac
    23761 gtgggtaacg gtgaatatcg tctgtcagtc acatcaaatg acaccggcct tgataatgcg
    23821 atgacactct cggtcagcgg tgatgatgcg ctacaaagtt ttatgggcta tgacgccagt
    23881 gccagcagca acggtatgga ggtctcggtc gccgccaaga atgcgcagct gacggtcaac
    23941 aacgtcgcca ttgagaacag cagcaacacc atcagcgacg cgctggaaaa catcaccctg
    24001 aacctgaacg atgtcaccac gggcaaccag acgctaacca tcactcagga cacctccaaa
    24061 gcgcaaacgg cgattaaaga ctgggtgaat gcctataact cgttaataga taccttcagt
    24121 agcctgacca aatacaccgc cgtagatgcg ggagctgata gccagagttc tagcaatggc
    24181 gcactgctcg gcgactccac gctgcggacg attcagacgc agttgaagtc gatgctgagt
    24241 aataccgtca gttcttccag ctataaaacg ctggcgcaga ttggtatcac gaccgatccc
    24301 agcgatggca aactggaact ggatgccgac aaactcaccg ctgcactgaa aaaagatgcc
    24361 agcggcgtag gtgcattgat tgttggcgat ggtaaaaaaa ccggcatcac gaccaccatc
    24421 ggcagcaacc tgaccagttg gctttcgaca acgggcatta ttaaagccgc taccgatggc
    24481 gttagtaaga ccctgaataa gttaactaaa gactacaacg ccgccagcga tcgcattgat
    24541 gcgcaggtcg cgcgctacaa aaaacaattt acccaactgg acgttttaat gacctcgtta
    24601 aacagcacca gcagctactt aacgcagcag ttcgaaaaca acagtaattc caagtaatca
    24661 ttattcatcg ggagacaggt catgtacgcg gcaaaaggca cccaggccta tgcacaaatt
    24721 ggcgtcgaaa gcgccgtaat gagcgccagc cagcagcagc tggtcaccat gctatttgat
    24781 ggagtgctga gcgcactggt tagagcgcgc ctgtttatgc aggacaacaa tcagcaaggc
    24841 aaaggcgtct ctttgtcaaa agcgatcaac atcattgaga acggactgcg ggtgagtctt
    24901 gatgaagaga gcaaagacga actaacccaa aacttgattg ctctttatag ctatatggtc
    24961 aggcgcttgc tgcaagccaa tttacgcaac gatgtctccg cagtcgaaga agtggaagca
    25021 ttaatgcgca atattgccga tgcctggaaa gagtcgttac tctccccttc tttgattcag
    25081 gacccagtct gatgaaccat gcaccgcatt tgtatttcgc ctggcaacaa ctcgtcgaaa
    25141 aaagccagct catgttacgc ctggcaacgg aagaacaatg ggacgaactc atcgccagcg
    25201 aaatggcgta tgtgaatgcg gtgcaggagt atagcacacc tgactgaaga ggttgccccg
    25261 tccaccacga tgcaggagca gctccgcccg atgctgcgcc tgattctcga caacgaaagc
    25321 aaggtaaagc agttattaca gattcgtatg gatgaactgg cgaaactggt cggtcagtca
    25381 tcggtgcaaa aatcggtgtt aagtgcctat ggcgatcagg gcggctttgt gctggctccg
    25441 caagataact tctcgtgaat cttaacgagc taatggttcg cgaataatcc gattacggct
    25501 acgcttctaa tgttcccctt gaatggagtc gaagaatgcg taatcccacg ctgttacaat
    25561 gttttcactg gtattacccg gaaggcggta agctctggcc tgaactggcc gagcgcgccg
    25621 acggttttaa tgatattggt atcaatatgg tctggttgcc gcccgcctat aaaggcgcat
    25681 cgggcgggta ttcggtcggc tacgactcct ataatttatt tgatttaggc gagtttgatc
    25741 agaaaggcag catccctact aaatatggcg ataaagtaca attgctggcc gccattgacg
    25801 ccctgaaacg taatgacatt gcggtgctgt tggacgtggt agtcaaccac aaaatgggcg
    25861 cggatgaaaa agaagctatt cgcgtgcagc gtgtaaatgc tgacgaccgt acgcaaattg
    25921 atgaagaaat cattgagtgc gaaggctgga cgcgttacac cttccccgcc cgtgccgggc
    25981 aatactcaca gtttatctgg gatttcaaat gttttagcgg tatcgaccat atcgaaaacc
    26041 ctgatgaaga tggcatattt aaaattgtta acgactacac cggcgaaggc tggaacgatc
    26101 aggttgatga tgaattaggt aatttcgatt atctgatggg cgagaatatc gattttcgca
    26161 atcatgccgt gacggaagag attaaatact gggcgcgctg ggtgatggaa caaacgcaat
    26221 gcgacggttt tcgtcttgat gcggtcaaac atattccggc gtggttttat aaagagtgga
    26281 tcgaacacgt acaggaagtt gcgccaaagc cgctgtttat tgtggcggag tactggtcgc
    26341 atgaagtcga taaactgcaa acgtatattg atcaggtgga aggcaaaacc atgctgttcg
    26401 atgcgccgct gcagatgaaa ttccatgaag catcgcgcat ggggcgcgac tacgacatga
    26461 cgcagatttt cacgggtaca ttagtggaag ccgatccttt ccacgccgtg acgctcgttg
    26521 ccaatcacga cacccaaccg ttgcaagccc tcgaagcgcc ggtcgaaccg tggtttaaac
    26581 cgctggcgta tgccttaatt ttgttgcggg aaaatggcgt tccttcggta ttctatccgg
    26641 acctctacgg tgcgcattac gaagatgtcg gtggtgacgg gcaaacctat ccgatagata
    26701 tgccaataat cgaacagctt gatgagttaa ttctcgcccg tcagcgtttc gcccacggtg
    26761 tacagacgtt atttttcgac catccgaact gcattgcctt tagccgcagt ggcaccgacg
    26821 aatatcccgg ctgcgtggtg gtcatgtcga acggggatga tggcgaaaaa accattcatc
    26881 tgggagagaa ttacggcaat aaaacctggc gtgattttct ggggaaccgg caagagagcg
    26941 taataaccga cgaacacggc gaagcaacct tcttttgcaa cggcggcagc gtcagcgtgt
    27001 gggttatcga agaggtgatt taaattcatc cccggcggca agccggggag atttcattac
    27061 ggcagtggcg tcggtaacgg cgctttatcc agcgcggcgg cacactctgc cgtcgggcga
    27121 tccacacgct ccatcgtcat accatcgtac tcaatggtgt taccgtcacg ctcaacctcg
    27181 tacagctcac gttttacggt aacgttagtg agatcatcag acatcaatgc caacttaccc
    27241 ggcacagcaa tcacccgctg ccactgacgg caatccagag tatcaccctc tttagtgaca
    27301 atcaggctgc ctatcgcttc cggactgacc agcgcacgtt gcggcccttt ggtctgccag
    27361 tagcccgcca gccagtccgg cgcgggggtt ttcacgacat tgttatagtt ttcgacttcg
    27421 gcacagcccg ccagcaacat gagcgcgcct gcaattgcga gttttttcat cattcgtcct
    27481 gcatgagaag aaaagaggat tgtggcatta aagccctgat gtcgccagcc tttccaggtt
    27541 cagagagaaa tttgatctaa ctattatttt tgtgaattat taccccgaaa ataaatttgc
    27601 atgatgtatg attcgcgact cttgtttcaa accttctgag ttcagaggct acattcatgt
    27661 catggcagca attcaaacac gcctggttga ttaaattctg ggcacccatc cctgcggtca
    27721 tcgcggcggg tattctctcc acttactatt ttggcattac tggcaccttt tgggctgtca
    27781 cgggtgaatt tacccgttgg ggcggccagc tcctgcagct gtttggcgtc catgctgaag
    27841 agtggggtta ttttaaaatt atccatctgg aaggatcgcc attaacccgc atcgacggga
    27901 tgatgatcct cggcatgttt ggcggctgct ttgccgcagc gctgtgggcc aacaatgtca
    27961 aactgcgcat gccacgcagc cgtatccgca ttatgcaggc cattattggc ggtattatcg
    28021 ctggttttgg cgcgcgtctg gcaatgggct gtaacctggc ggcgttcttt accggtattc
    28081 ctcagttctc gctgcatgcc tggttctttg ccatcgccac tgccattggt tcatggtttg
    28141 gcgcacgctt taccctgctg cccatcttcc gtattcccgt gaaaatgcag aaagtttctg
    28201 ccgcctcacc gctgacgcaa aaaccggatc aggcgcggcg tcgttttcgt ctcgggatgc
    28261 tggtcttttt cggtatgctg ggctgggcgc tgctcacggc gatgaaccaa ccaaaactgg
    28321 ggctggcaat gctgtttggc gtcggctttg gtttactgat tgaacgtgcg caaatctgct
    28381 ttacttcggc gttccgcgat atgtggatca ccggacgtac ccatatggcg aaagcaatca
    28441 ttatcggtat ggcggtgagt gccatcggga tcttcagtta cgtacagtta ggcgttgaac
    28501 ccaaaatcat gtgggcggga ccaaacgcgg taattggtgg tttactgttt ggttttggca
    28561 tcgtgctggc aggcggctgc gaaaccggct ggatgtaccg cgcggtagaa ggccaggtgc
    28621 actactggtg ggtcggtctg ggcaatgtga tcggctcgac gattctggcg tattactggg
    28681 atgatttcgc tccggcgctg gccaccgact gggacaaaat caacctgctg aaaacctttg
    28741 gcccgatggg tggcctgctg gtgacatatt tgctgttgtt tactgcgctg atgttgatta
    28801 tcggctggga aaaacgcttc ttccgccgtg cggcaccgca gactgctaag gagatcgcat
    28861 gaaaaatatc gttcctgatt accgccttga tatggtgggt gaaccctgcc cttatccggc
    28921 agtcgcaacc cttgaggcga tgccgcagtt aaaaaaaggg gaaatcctgg aagtggtgag
    28981 cgactgtcca cagtcgatca ataatattcc actggatgcg cgtaatcacg gctatacggt
    29041 gcgggatatt cagcaagacg ggccgaccat tcgttattta attcagaagt aatccctcat
    29101 tcccgctgtg gcccacagcg ggaacatcgt tgcctctgac acatagattt tacccgcccc
    29161 ctctcctatt cttttcagta tgatctcagg aggtttctat gtgtggacgc tttgcccaat
    29221 cccaaacgcg tgaagattac cttgcgcttc tcgcggaaga tattgaacgc gatattccct
    29281 acgatcccga acccattggc agatacaacg tcgcgccggg aaccaaagtt cttctgctca
    29341 gtgaacgtga tgaacacctt catctggatc cggttttctg gggatatgct cccggatggt
    29401 gggataaacc gccgctgatt aacgcccgcg tagaaactgc cgcaaccagt cgcatgttta
    29461 aaccgctctg gcaacatggt cgggcaatct gttttgccga tggctggttt gagtggaaaa
    29521 aagaaggcga caaaaaacag ccttttttta tctatcgtgc tgatggacaa cctattttta
    29581 tggccgcgat aggtagcaca ccatttgagc atggtgacga agccgaagga tttttaattg
    29641 tcactgctgc agcagaccag ggtctggtag acattcatga ccgccgcccg ctggttctgt
    29701 cgccagaagc tgcacaggaa tggatgcggc aagagattgg cggtaaagaa gcatcagaaa
    29761 ttgctaccaa cggctgtgtg ccagcaaacc agttcacctg gcacccggta tcgcgcgcgg
    29821 taggtaatgt caaaaaccag ggcgcggagt taattcaacc tgtttgttga catcctccac
    29881 gccctgaagg acgaggctcc ctgctacgtt caggctgtcg cctgaatcat ttcggtgggt
    29941 tcctgcttca acgggcggcc tgactgcacc atctctccac aggcaagaac ggcgtgcccc
    30001 gccgctaaaa tgttacgagc gccatttaca tcggcgttcg ctgtatatcc acatacctgg
    30061 catctgaatt tactttgtga caggcggttt tctttcgctg tatgaccaca gcacgcgcaa
    30121 cgctggcttg tgcacgctgg cggaacagca aacacctgac cgccacgcca gagctgcttg
    30181 tactcaagct ggcggcgcat ttcataccag ccctgatcca gtatcg
//
LOCUS       DADMIB010000033        29203 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.033, whole genome shotgun sequence.
ACCESSION   DADMIB010000033 DADMIB010000000
VERSION     DADMIB010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29203
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.033"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..154
                     /locus_tag="JNZ89_001418"
     CDS             <1..154
                     /locus_tag="JNZ89_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2135 domain-containing protein"
                     /protein_id="HAY8935338.1"
                     /translation="NYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTL
                     VKSFDW"
     gene            429..3278
                     /gene="rcsC"
                     /locus_tag="JNZ89_001419"
     CDS             429..3278
                     /gene="rcsC"
                     /locus_tag="JNZ89_001419"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416722.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RcsC"
                     /protein_id="HAY8935339.1"
                     /translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR
                     ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF
                     EPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
                     RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANR
                     LQALLGGEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGEPRWMQERSW
                     FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLA
                     RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN
                     MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
                     KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
                     TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
                     LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT
                     GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
                     QFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE
                     PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI
                     YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
                     GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC
                     LESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES"
     gene            complement(3478..4128)
                     /gene="rcsB"
                     /locus_tag="JNZ89_001420"
     CDS             complement(3478..4128)
                     /gene="rcsB"
                     /locus_tag="JNZ89_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsB"
                     /protein_id="HAY8935340.1"
                     /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
                     LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
                     IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
                     LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD"
     gene            complement(4145..6817)
                     /gene="rcsD"
                     /locus_tag="JNZ89_001421"
     CDS             complement(4145..6817)
                     /gene="rcsD"
                     /locus_tag="JNZ89_001421"
                     /EC_number="2.7.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase RcsD"
                     /protein_id="HAY8935341.1"
                     /translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
                     WLKDKSYQIVDITHAIQKRVNTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYL
                     EKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLIST
                     LPLKDLTSGFKESTISDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTT
                     FNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGDNDNEKEGTDSVSIHFNS
                     TKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFS
                     SRSTESLPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHL
                     NLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
                     AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDE
                     IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGD
                     RDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLH
                     FPFINQPQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPE
                     VEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNP
                     SNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLG
                     GDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPG
                     KQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL"
     gene            7556..8686
                     /gene="ompC"
                     /locus_tag="JNZ89_001422"
     CDS             7556..8686
                     /gene="ompC"
                     /locus_tag="JNZ89_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HAY8935342.1"
                     /translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNKSEDGDQTYVRLGFKGETQVTDQLTGYGQWEYQIQGNTSEDNKENSWTRVAFAGL
                     KFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFG
                     LVDGLNFAVQYQGKNGSVSGEGMTNNGRGALRQNGDGVGGSITYDYEGFGIGAAVSSS
                     KRTDDQNGSYISNGVVRNYIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSL
                     GWANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKNLGVINSRNYDDEDILKYVDVGATY
                     YFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF"
     gene            8798..9853
                     /gene="apbE"
                     /locus_tag="JNZ89_001423"
     CDS             8798..9853
                     /gene="apbE"
                     /locus_tag="JNZ89_001423"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase ApbE"
                     /protein_id="HAY8935343.1"
                     /translation="MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT
                     FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA
                     MAEIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDEMKAKTGLQH
                     LTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSR
                     GINGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ
                     TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF
                     KTWMSPQFKSFLVSEKN"
     gene            9927..10979
                     /gene="ada"
                     /locus_tag="JNZ89_001424"
     CDS             9927..10979
                     /gene="ada"
                     /locus_tag="JNZ89_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HAY8935344.1"
                     /translation="MKNATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRA
                     RHALRENVSFYANASEALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPVTL
                     EALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFP
                     DSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCALGRCPVAESERGICAILLGDD
                     DATLISELQQMFPAADNAPADLTFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVW
                     QALRTIPCGETVLANAIGKPKAVRAVASACAANKLAIVIPCHRVVGGDGTLSGYRWGV
                     SRKAQLLRREAENEER"
     gene            10979..11629
                     /gene="alkB"
                     /locus_tag="JNZ89_001425"
     CDS             10979..11629
                     /gene="alkB"
                     /locus_tag="JNZ89_001425"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HAY8935345.1"
                     /translation="MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQS
                     PFRQMVTPGGYTMSVAMTNCGHLGWTIHRQGYLYSPIDPQTNKPWPAMPQSFHDLCQR
                     AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK
                     RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFYPLTTDCRYNLTFRQAGKKE"
     gene            11705..13348
                     /gene="yojI"
                     /locus_tag="JNZ89_001426"
     CDS             11705..13348
                     /gene="yojI"
                     /locus_tag="JNZ89_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin J25 efflux ABC transporter YojI"
                     /protein_id="HAY8935346.1"
                     /translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIEMA
                     DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
                     GSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAIT
                     IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDA
                     QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
                     TPLLSAVGALPTLLMAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFSYQD
                     NAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP
                     EDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL
                     SKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH
                     DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA"
     gene            13566..15212
                     /gene="mqo"
                     /locus_tag="JNZ89_001427"
     CDS             13566..15212
                     /gene="mqo"
                     /locus_tag="JNZ89_001427"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HAY8935347.1"
                     /translation="MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSA
                     TLGTYLRELEPEWSMTMLERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI
                     EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAAL
                     QQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIAS
                     LQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLL
                     QESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLD
                     GKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVML
                     SEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDADKGGVLRLGTEVVSDQQGTIA
                     ALLGASPGASTAAPIMLDLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE
                     LQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQKEVADIAL"
     gene            complement(15362..15850)
                     /gene="eco"
                     /locus_tag="JNZ89_001428"
     CDS             complement(15362..15850)
                     /gene="eco"
                     /locus_tag="JNZ89_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease inhibitor ecotin"
                     /protein_id="HAY8935348.1"
                     /translation="MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQV
                     IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVS
                     TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAE
                     VR"
     gene            complement(15985..16149)
                     /locus_tag="JNZ89_001429"
     CDS             complement(15985..16149)
                     /locus_tag="JNZ89_001429"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935349.1"
                     /translation="MHTPIGVKPVAGSKEWREAWQKRAFAHISNGYKHIYIAINSPEI
                     FLLVCSLIRI"
     gene            16258..16752
                     /gene="napF"
                     /locus_tag="JNZ89_001430"
     CDS             16258..16752
                     /gene="napF"
                     /locus_tag="JNZ89_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HAY8935350.1"
                     /translation="MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACI
                     NACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDAC
                     LAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEY
                     LHAH"
     gene            16742..17005
                     /gene="napD"
                     /locus_tag="JNZ89_001431"
     CDS             16742..17005
                     /gene="napD"
                     /locus_tag="JNZ89_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HAY8935351.1"
                     /translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL
                     IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP"
     gene            17002..19488
                     /gene="napA"
                     /locus_tag="JNZ89_001432"
     CDS             17002..19488
                     /gene="napA"
                     /locus_tag="JNZ89_001432"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HAY8935352.1"
                     /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
                     PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL
                     RMKNGKYDKEGEFTLITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS
                     KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE
                     MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII
                     QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA
                     EYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL
                     LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS
                     GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS
                     DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS
                     RRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY
                     LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE
                     GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
                     FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA
                     QLVNKLTQDATDPLSKETDFKKCAVKLEKV"
     gene            19495..20190
                     /gene="napG"
                     /locus_tag="JNZ89_001433"
     CDS             19495..20190
                     /gene="napG"
                     /locus_tag="JNZ89_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HAY8935353.1"
                     /translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV
                     RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
                     EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA
                     ITLELERNTRTGKHARFLPTVHRDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
                     YRFGWLEGNNGKS"
     gene            20177..21040
                     /gene="napH"
                     /locus_tag="JNZ89_001434"
     CDS             20177..21040
                     /gene="napH"
                     /locus_tag="JNZ89_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HAY8935354.1"
                     /translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW
                     FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR
                     LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILLGSALTGTLIWEWI
                     NPVSLMGRSLVMGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV
                     AATDRQKCNRCMDCFHVCPEPRVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT
                     ITTRWSSGAKS"
     gene            21037..21486
                     /gene="napB"
                     /locus_tag="JNZ89_001435"
     CDS             21037..21486
                     /gene="napB"
                     /locus_tag="JNZ89_001435"
                     /EC_number="1.9.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HAY8935355.1"
                     /translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE
                     GAIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP
                     THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK"
     gene            21496..22098
                     /gene="napC"
                     /locus_tag="JNZ89_001436"
     CDS             21496..22098
                     /gene="napC"
                     /locus_tag="JNZ89_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type protein NapC"
                     /protein_id="HAY8935356.1"
                     /translation="MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGF
                     NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR
                     KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA
                     QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF"
     gene            22117..22734
                     /gene="ccmA"
                     /locus_tag="JNZ89_001437"
     CDS             22117..22734
                     /gene="ccmA"
                     /locus_tag="JNZ89_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HAY8935357.1"
                     /translation="MLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLL
                     RLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDG
                     DTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVN
                     GVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA"
     gene            22731..23393
                     /gene="ccmB"
                     /locus_tag="JNZ89_001438"
     CDS             22731..23393
                     /gene="ccmB"
                     /locus_tag="JNZ89_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HAY8935358.1"
                     /translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ
                     LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM
                     VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVL
                     LSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRIS
                     IQ"
     gene            23435..24172
                     /gene="ccmC"
                     /locus_tag="JNZ89_001439"
     CDS             23435..24172
                     /gene="ccmC"
                     /locus_tag="JNZ89_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmC"
                     /protein_id="HAY8935359.1"
                     /translation="MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA
                     PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV
                     FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG
                     ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL
                     MRMRNLILLMEKRRPWVSELILKRGRK"
     gene            24169..24378
                     /gene="ccmD"
                     /locus_tag="JNZ89_001440"
     CDS             24169..24378
                     /gene="ccmD"
                     /locus_tag="JNZ89_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HAY8935360.1"
                     /translation="MTLAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHR
                     AILCGVEQQRAREARLRAAQQQEAA"
     gene            24375..24854
                     /gene="ccmE"
                     /locus_tag="JNZ89_001441"
     CDS             24375..24854
                     /gene="ccmE"
                     /locus_tag="JNZ89_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HAY8935361.1"
                     /translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL
                     YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL
                     FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS"
     gene            24851..26800
                     /locus_tag="JNZ89_001442"
     CDS             24851..26800
                     /locus_tag="JNZ89_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HAY8935362.1"
                     /translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW
                     MLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLL
                     MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD
                     LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAIASLLSGRLDSTYARFTRPWTLAAW
                     IFLTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKA
                     WTLLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAA
                     RGHKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPF
                     FNTMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKV
                     VAMTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQN
                     YSVERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKPETVLYAEK
                     RYYNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMAL
                     GGLLCLFDPRYRKRVSPQKTAPEAV"
     gene            26797..27354
                     /gene="dsbE"
                     /locus_tag="JNZ89_001443"
     CDS             26797..27354
                     /gene="dsbE"
                     /locus_tag="JNZ89_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbE"
                     /protein_id="HAY8935363.1"
                     /translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP
                     VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG
                     MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA
                     GDLNPRVWEEEIKPLWEKYSKEAAQ"
     gene            27351..28403
                     /locus_tag="JNZ89_001444"
     CDS             27351..28403
                     /locus_tag="JNZ89_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HAY8935364.1"
                     /translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP
                     KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV
                     LLWVLPVVAIGIGGWVIYARSRRRVRVVPDAFPEQSVPEGKRAGYIVYLPGIVVALIV
                     AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN
                     PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR
                     LGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLSANDTRRAVIE
                     RSIAQAMQHLSPQESK"
     gene            complement(28438..29085)
                     /gene="narP"
                     /locus_tag="JNZ89_001445"
     CDS             complement(28438..29085)
                     /gene="narP"
                     /locus_tag="JNZ89_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite response regulator protein NarP"
                     /protein_id="HAY8935365.1"
                     /translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPSFEVVAEAGDGASA
                     IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG
                     ADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELD
                     VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ"
BASE COUNT         6670 a         7210 c         8095 g         7228 t
ORIGIN      
        1 caactactat ggtgggcgca gcgaaacgga attaaccacc gcccaactga cgctgatcac
       61 cgatgaagga tcggtcaatg agaaacagga aacatttatt gtaccgatgc gtaatgctgg
      121 cgagctgacg ctggtgaaaa gttttgactg gtgatccatc ccttcacaca acctggctct
      181 ctcttttttc agataagact gctgggcgat ctgccgacgc caggatataa ccattaacaa
      241 gcgtcggcag attggtcatt tcttattttt cgtactgaga actgtccatc tactccggct
      301 ttcctggtta aggcaatggt ttctaagcga tacgcattat tgcaataatg acagaacatt
      361 gcggtaacac gcttttaccg ctaccttaac cacactccat cggtcacctg aggcggagct
      421 tcgccccttt gaaatacctt gcttcttttc gtacaaccct gaaagcctcg cgctacatgt
      481 tcagagcatt ggcgttagtg ctctggctgt tgattgcttt ttcatccgtt ttttacatcg
      541 ttaatgcgtt acatcagcga gaatcggaaa ttcgtcagga atttaatctg agttccgatc
      601 aggctcagcg ctttattcaa cgcacctctg atgtgatgaa agagctgaag tacatcgccg
      661 aaaatcgctt atcggcagaa aacggtgtgc tttccccgcg tggacgagaa acgcaggcgg
      721 atgtgcctgc gtttgaaccg ctgtttgccg actccgattg ttccgcaatg agtaacacct
      781 ggcgaggttc tctggagtca ttggcgtggt ttatgcgcta ctggcgcgat aatttttctg
      841 cggcttacga tctaaaccgg gtatttttaa tcggcagcga taacctctgc atggccaatt
      901 tcggtctgcg tgatatgcca gtggaacgcg ataccgcgtt gaaagctttg catgaacgca
      961 tcaataaata tcgaaatgca ccacaagatg atagcggcag taacctctac tggatcagcg
     1021 aaggtccgcg ccctggcgtc gggtattttt acgcgttgac gccagtttat ctggcgaacc
     1081 ggttgcaggc gcttttgggg ggcgagcaga ccatccggat ggagaacttt ttcttaccgg
     1141 gtacgttgcc gatgggggtt accattcttg atgaaaatgg tcataccctg atttcgctta
     1201 ccggaccaga aagtaaaatt aagggcgagc ctcgctggat gcaggaacgc tcctggtttg
     1261 gctatacgga agggttccgg gagctggtgc tgaagaaaaa tctgccaccc tcatcgctaa
     1321 gcatcgtgta ttcggtgccg gttgataagg tgctggaacg cattcgcatg ttgatcctta
     1381 acgcaatttt gctgaatgtg cttgccggag ctgcattgtt tactctcgca cggatgtacg
     1441 agcgacgtat tttcattccg gcggaaagcg acgccctgcg actggaagaa catgagcagt
     1501 tcaatcgcaa gattgtcgcc tccgcgccag tgggtatctg cattttgcgt accgctgatg
     1561 gcgtcaatat tttaagtaac gaactggcgc atacctatct caatatgctt acgcatgagg
     1621 accgccaacg actgacgcaa attatctgtg ggcagcaggt caattttgtt gatgtcctga
     1681 ccagcaacaa taccaatctg caaatcagct tcgtccattc gcgctatcgt aatgaaaacg
     1741 tggccatttg tgtgctggtg gatgtttctt cgcgcgtgaa gatggaagag tcgttgcagg
     1801 agatggcaca agcagcggaa caggcgagcc agtcaaaatc gatgttcctt gccaccgtca
     1861 gtcatgagct gcgaacgccg ctgtatggca ttatcggtaa cctggatctg ttgcaaacca
     1921 aagagttacc gaaaggcgtc gatcggctgg tgacggcaat gaacaactct tccagcctgt
     1981 tgttgaaaat tatcagcgat attctcgatt tctcgaagat tgaatcggaa cagttgaaga
     2041 tcgaaccgcg tgagttttca ccgcgtgaag tgatgaacca catcaccgcc aactatttac
     2101 cgctggtggt acgcaagcag ttaggcttgt actgctttat tgaaccggat gtgccagtgg
     2161 ccttaaatgg cgacccgatg cgtttacagc aggtcatctc caacctgttg agtaacgcca
     2221 taaaattcac cgataccggc tgtatagttt tgcatgtccg cgctgatggc gattatctct
     2281 ctatccgtgt tcgcgatacc ggcgtgggga ttccggcgaa agaagtggtg cgcttgtttg
     2341 atcccttctt ccaggtcgga acgggcgtac agcgaaactt ccaggggacc ggtctgggtc
     2401 tggcgatttg tgaaaaactg atcagcatga tggacggcga tatctcggta gattcagaac
     2461 cgggaatggg cagccagttt accgtgcgta ttccgttgta cggcgctcag tacccgcaga
     2521 aaaaaggcgt ggaagggttg agtggtaaac gctgctggct ggcggtccgc aatgcgtcgc
     2581 tctgtcagtt cctagaaact agtttgcagc gcagcggcat cgtcgttaca acatacgaag
     2641 ggcaggaacc gactcccgaa gatgtgttaa ttactgacga ggtagtgagt aaaaaatggc
     2701 agggtagagc ggtagtgacc ttctgtcgtc gccatattgg tattccgctg gagaaagcgc
     2761 caggggagtg ggtacacagt gtggctgccc cgcatgagct accggcattg ttggcgcgta
     2821 tttatttgat cgagatggag agcgacgatc ctgctaacgc tctgccgtcg acggacaaag
     2881 cggtcagcga taatgacgat atgatgattc tggtcgtgga tgatcatccg attaaccgac
     2941 gtctgctggc agatcagttg ggatcgttgg gctatcaatg taaaaccgcg aatgatggtg
     3001 tcgatgcgct taatgtactt agcaagaatc atattgatat cgtgcttagc gacgtcaaca
     3061 tgccaaatat ggatggttac cgcttgacgc aacgcattcg tcagttggga ctgacgttgc
     3121 cggtaatcgg agtaactgct aatgcgttgg ctgaagagaa gcagcggtgt ctggagtccg
     3181 gtatggacag ctgcctgtcg aagccggtaa cgctggatgt gataaaacag acgctgacgg
     3241 tatatgccga gagggtcagg aaatcgcggg aatcgtagga cggataaggt gtttatgtcg
     3301 catctggcat tcagtgcaaa tgccagatgc gacgctgacg cgtcttatct ggcctacttt
     3361 gatgtaatct gttgaaataa tgggaatcgt aggacgcata aggcgtttac gccgcatccg
     3421 gcaatcggtg caaatgctag ataagacact aacgcgtctt atctggccta caggtgatta
     3481 gtctttatct gccggactta acgtcactga agagagataa ttcagcaggg cgatatcgtt
     3541 ctcgacaccc agcttcatca tcgcagattt cttctggcta ctgatggttt taatactgcg
     3601 gttcagcttt ttagcgatct cggtcaccaa gaagccttcc gcaaacaggc gcagaacttc
     3661 actctctttt ggcgagagac gcttgtcacc gtaaccacca gcactgattt tttccaacag
     3721 gcgagaaacg ctttccgggg taaatttctt ccctttctgc agcgcggcga gagctttcgg
     3781 cagatcggtc ggtgcacctt gtttcagcac gatcccttcg atatccagat ccaataccgc
     3841 actaagaatc gccgggttgt tgttcatagt cagaacaatg atcgacaggc ttgggaaatg
     3901 gcgcttgatg tacttgatta aggtaatgcc atcgccgtac ttatcgccag gcatggagag
     3961 atcggtaatc aacacatgcg catccagttt cggcaggttg ttgatcagtg ctgtagagtc
     4021 ttcaaattcg ccgacaacat tcacccactc aatttgctca agtgatttgc gaataccgaa
     4081 caagactatc ggatggtcat cggcaataat tacgttcata ttgttcatgt aataggctac
     4141 cttgctacag caagctcttg acataactgt caatgtcgct gatgtatttt tctattcctg
     4201 gaacatcctt ctcacgaatc agatgttcca gcgtttcaca taactgcttg ccgggtacca
     4261 gatttagcat ggcaaatacg cctttaagac gatgagccgt ttgggctaac gcagcaaagt
     4321 cactggttgc tgcttcagta tacagcctct taacatcatc cggtactgtg tctacaaaga
     4381 gcgcataata gccgctggca tggagttgcg cattttcatc tccgcccaga ggcgattctg
     4441 tcacctcttc ctgcgccagt tgcacttcaa ttaattgtaa gaccgcttcc tgcatagcgt
     4501 tgctcatatt gaagttgacg cacaattgac caggcccaat ttcccgtacg ccagactcat
     4561 catcgcttaa aagcaagcca gaggcagtaa gattagacgg attatccgtt aaaaagatat
     4621 cataatcttg actaattaat ctttcatcgg gtgtgataca ggttgcaccc caattttcta
     4681 actggcgagt gacaatattc cgaatttctg ccgaagtaac atccaccatt acgcagacat
     4741 catccagtaa acgctcttct tcctcttcaa cttccgggtc agcggcgagc attttgatat
     4801 gcacagagta gcgtgtacca agcccatccc gcgttttgat gtttaaatga ccgcccagtt
     4861 tacgcgccag ttgatcgctc agccagaatg ccagcgggtc cgccttgcca tagcgatcgt
     4921 tttggggctg gttgataaac gggaagtgca aattatccat ttcatgaata cttacgcctt
     4981 ctcccgtgtc cagaatgcgg aatgtcaggc ggtcttcaga ggactcatcc tgatcaacct
     5041 caagggtgat ttttcccaat tgcgttgagg tcacggcata ttgcatcagt agcagcaaaa
     5101 tacgtcgtaa ggcatcgcga tcgccgcggc gcatatcgtg tgctttcaga tgattgttaa
     5161 tcagcagttg cagaccttta cgcttgatgg caggcaacac tgaaggcaca acttcatcaa
     5221 ttaaatcctg cacggagaac agcaccgtct cacttttcca gctatcgtcc gcaagcatgt
     5281 tcgctaactg tatttcatcg accagccgca ccagcacatc tgcctgattc gccagttgtt
     5341 tgctttccgg ggcgttgagt ttagccgcgc tctccgccag ggactgtgcg ggttctttca
     5401 gcgcatcgcc aatgtttttc ataaaggtca tccgcccctg ctggtttttc tcatacagac
     5461 gctgcgcctg cttgagtttc ttgtttacca gcacttcgcg atcctgatcg cgaataatga
     5521 aaatttgtgt gcgcggcgcg acctggctgc ggaacatgcg gatctcatac agctcgttat
     5581 tgatcgtcgc ctgaataatc ccctgatgct gttccgccat ggtggtgatg ttttgcagat
     5641 tcaaatgcgg cagcaaatga tcggcaattt tgttacttat gacagtgcgg ttcgattcct
     5701 gatcgtgaac cagcaggccg agcggcagca gtgagactat ctcttcatta attgcccgta
     5761 aaatgcgcaa ttcgttattg accgccgtgc tgggtagact ttctgtactg cggctggaga
     5821 aatggcggaa tgtggtatag ccaaataacg ccagcgccag caaaccgatg ttcagcagca
     5881 gtggcagcag aatgttttgc aacgtatcca gcaataaggt gccataagga acctgccaga
     5941 ccaggcgcat atcggtagag ttgagtgccg aggagatttc aatcttcgta ctgttaaagt
     6001 ggatactgac gctatccgtc ccttctttct cattatcatt gtctcccgtt gccgtcgcgt
     6061 ctggctcaag gcggaaactg tccagcggca tacccggtgg gatcaaatca ttaatcggta
     6121 gatcaaaagc tacgaccgtt gccagatgtc ccggctggtt gaacgtggta cgcaaggtaa
     6181 agtaatgacc gttctgccag gccaggcggc gcatgttaga aaaactttcg cgttcatcga
     6241 gggcgttggc ctgttgcaac atctctgcac gacgtgaatc aacaatgtcg ctgatggtcg
     6301 attctttaaa tccggaggtg agatctttga ggggcagggt tgagatcagc accagactgt
     6361 tatcctgacc attcaggtaa tacatcgacc acggtacatt ttctgcgccc cacaatgtgt
     6421 ccagataggt ggacatccgc tgagtcatct caagcgttga gttgtcgtga gagccaaaga
     6481 ttaacgcttc cgttttgcgg cgcggtttct ccagatagta gacatcctgt ttcaggcgcg
     6541 tctcttgtaa accttcgccg gaggaggggg aggttgtcgc ggcaatgttg tcgtagatct
     6601 gccaggtcac gtaacgccag gtattgacgc gcttttggat agcgtgggta atgtcgacaa
     6661 tctggtaact tttatctttc agccatgcgt taacggcgct ttgtaccatt acacccatcg
     6721 tcaccagtaa cacaatgatc aacagtaaaa agaagcgggt aatgctcccc ggtaggagtg
     6781 aaaagcgggt cgtggccgtt gtctctttct gacgcattcg tgtttatgac ctgttaaaac
     6841 ttcgcgaagt gatagggcag tataaagggt acagtgtgaa attccagact cttacctgat
     6901 tgatgattct ctattctccc gtgatattta tcatcctgca ttgggggaaa tagatgtaca
     6961 agcgccattt tgctgtacaa ataacctaca aaaagcccaa cgaaattaat tgcaaataaa
     7021 cgatgattgc tggaaattat gctgatgtta attatttgtg aaatagttaa caagcgttat
     7081 agtttttctg tggtagcaca gaataatgaa aagtgtgtaa agaagggtaa aaaaaaccgg
     7141 atgcgaggca tccggttgaa ataggggtaa acagacattc agaaatgaat gacggtaata
     7201 aataaagtta atgatgatag cgggagttat tctagttgcg agtgaaggtt ttgttttgac
     7261 attcagtgct gtcaaatact taagaataag ttattgattt taaccttgaa ttattattgc
     7321 ttgatgttag gtgcttattt cgccattcca caataatctt aaaaagttcc cttgtattta
     7381 cattttgaaa catctatagc gataaatgaa acatcttaaa agttttagta tcatattcgt
     7441 gttggattat tctgcatttt tggggagaat ggacttgccg actgattaat gagggttaat
     7501 cagtatgcag tggcataaaa aagcaaataa aggcatataa cagagggtta ataacatgaa
     7561 agttaaagta ctgtccctcc tggtcccagc tctgctggta gcaggcgcag caaacgctgc
     7621 tgaagtttac aacaaagacg gcaacaaatt agatctgtac ggtaaagtag acggcttgca
     7681 ctatttctct gacaacaagt cagaagacgg cgaccagacc tatgtacgtc ttggtttcaa
     7741 aggcgaaact caggttactg accagctgac cggttacggc cagtgggaat atcagatcca
     7801 gggcaatacc tctgaagaca acaaagaaaa ctcctggacc cgtgtggcat tcgcaggtct
     7861 gaaattccag gatgtaggtt ctttcgacta cggtcgtaac tacggcgttg tttacgacgt
     7921 aacttcctgg accgacgtac tgccagaatt cggtggcgac acctacggtt ctgacaactt
     7981 catgcagcag cgtggtaacg gcttcgcgac ctaccgtaac accgacttct tcggtctggt
     8041 tgacggtctg aactttgctg ttcagtacca gggcaaaaac ggtagcgtaa gcggcgaagg
     8101 catgaccaac aacggtcgtg gcgctctgcg tcagaacggc gacggtgtcg gcggttctat
     8161 cacttatgat tacgaaggct tcggtatcgg tgctgcagtt tccagctcca aacgtactga
     8221 tgatcaaaat ggtagctaca tcagcaatgg tgtagttcgt aactacatcg gtactggcga
     8281 ccgtgctgaa acctacactg gtggtctgaa atacgacgct aacaacatct acctggctgc
     8341 tcagtacacc cagacctaca acgcaactcg cgtaggttcc ctgggttggg cgaacaaagc
     8401 acagaacttc gaagctgttg ctcagtacca gttcgacttc ggtctgcgtc cgtctgtagc
     8461 atacctgcag tctaaaggta aaaacctggg tgtcatcaat agtcgtaact acgacgacga
     8521 agatatcctg aaatatgttg atgttggcgc gacctactac ttcaacaaaa acatgtccac
     8581 ctatgttgac tacaaaatca acctgctgga cgacaaccag ttcactcgtg acgctggcat
     8641 caacactgat aacatcgtag ctctgggtct ggtttaccag ttctaatctc gattgatatc
     8701 gaacaaaggg cctgcgggcc cttttttcat tgttttcagc gtacaaactc agttttttgg
     8761 tgtactcttg cgaccgttcg catgaggata atcacgtatg gaaataagct ttacccgcgt
     8821 ggcactgctg gctgccgcgc tcttctttgt tggttgcgat caaaaaccac aacccgccaa
     8881 aacccacgct actgaagtta ccgttcttga aggcaaaacc atgggtacct tctggcgtgc
     8941 cagcatcccg ggcattgatg ccaaacgcag tgccgaactt aaagaaaaga ttcagaccca
     9001 gctggacgcc gacgatcagc tgctttcgac ctataaaaaa gattccgcgc tgatgcgctt
     9061 taacgactcg caaagtttgt cgccgtggcc agtaagtgaa gcgatggccg aaatcgtcac
     9121 tacctcgctg cgcattggcg cgaagaccga tggtgcgatg gatattaccg tcgggccgct
     9181 ggtaaatctg tggggctttg gcccggaaca acagccggtt caaattccga gccaggaaca
     9241 gatcgacgag atgaaagcca aaactggttt acagcacctt acggtcatta atcagtcgca
     9301 tcagcaatat ctgcaaaaag acctgccgga tttatatgtc gatctctcta ccgtcggcga
     9361 aggttatgcg gcggatcact tggcacgctt gatggagcag gaagggattt cccgctatct
     9421 ggtgtcggtg ggcggcgcgc tgaacagccg tggtatcaac ggtgaaggcc tgccgtggcg
     9481 ggtagcgatt caaaaaccaa ccgataaaga aaacgcagtt caggctgtgg tggatatcaa
     9541 cggtcatggg attagcacct ctggcagcta ccgtaactat tacgaactgg acggcaaacg
     9601 tctttcccat gttatcgatc cgcaaaccgg gcgtcccatc gaacacaatc tggtatccgt
     9661 gacggtgatt gctccgacgg cgctggaagc cgatgcctgg gatactggct tgatggtact
     9721 cgggccggag aaagccaaag aggttgttcg ccgggaaggg ctggcggttt atatgatcac
     9781 caaagaaggc gatagcttta aaacctggat gtcaccacag tttaaaagct tccttgtcag
     9841 cgaaaaaaat taaagcgcaa gattgttggt ttttgcgtga tggtgaccgg gcagactaaa
     9901 ggctatcctt aaccagggag ctgattatga aaaacgccac atgcttaact gacgatcaac
     9961 gctggcaatc tgtcttagcc cgcgacccga atgccgacgg cgaattcgtt ttcgccgtgc
    10021 gcaccacagg catcttttgc cgtccgtctt gccgcgccag acatgccttg cgggaaaatg
    10081 tctccttcta cgcaaatgcc agcgaggcac tcgccgccgg atttcgcccc tgcaaacgct
    10141 gccaacctga taaagccaat gcccagcaac atcggttgga taaaatcacc cacgcgtgtc
    10201 gactgctgga acaggaaacg cctgtaacgt tggaagcctt agccgaccag gtggcgatga
    10261 gtccatttca tctacatcgg ttgtttaaag cgactaccgg aatgacgcct aaagcctggc
    10321 aacaggcctg gcgcgctcgc cgtttgcgcg aatcgctggc gaaaggggag agcgtgacga
    10381 cgtctattct taacgccgga ttccccgaca gcagcagtta ctaccgcaaa gccgatgaaa
    10441 cgctgggcat gacggctaaa caattccgtc acggtggcga aaatctggcg gtgcgttacg
    10501 cgctggctga ttgtgcgctg ggtcgttgcc cggtggcaga aagcgagcgg gggatttgcg
    10561 cgatattgct gggcgatgat gacgcgacat taatcagcga gttgcagcag atgtttcccg
    10621 ctgccgacaa cgcgcctgcc gatctgacgt ttcagcaaca tgtgcgtgaa gtgatcgcca
    10681 gcctcaatca acgcgatacg ccgctgacgt taccgctgga tattcgcggc actgcttttc
    10741 agcaacaagt ctggcaggca ctgcgcacga taccttgcgg tgaaaccgta ctggctaacg
    10801 ccatcggcaa accgaaagcg gtacgggccg ttgccagcgc ctgtgccgcc aacaagctgg
    10861 ctatcgtaat accctgtcat cgagtggtcg gtggtgatgg cacactttcc ggttaccgct
    10921 ggggcgtgtc tcgtaaagcg caactgctgc gccgcgaagc tgaaaatgag gagaggtaat
    10981 gttggatctg tttgccgatg ctgaaccgtg gcaagagcca ctggcggctg gtgcggtaat
    11041 tttacggcgt tttgctttta acgctgcgga gcaactgatc cgcgatatta atgacgttgc
    11101 cagccagtcg ccgtttcgcc agatggtcac ccccggggga tataccatgt cggtggcgat
    11161 gaccaactgt gggcatctgg gctggacgat ccatcggcaa ggttatctct attcgcccat
    11221 tgatccgcaa acaaataaac cgtggcccgc catgccacaa agctttcatg atttatgtca
    11281 acgtgcggct acggcggcgg gctatccaga tttccagcca gatgcttgtc ttatcaaccg
    11341 ctacgctcct ggcgcgaaac tgtcgctgca tcaggataaa gacgaaccgg atctgcgcgc
    11401 gccaattgtt tctgtttctc tgggcttacc cgcgattttt caatttggtg gcctgaaacg
    11461 taatgatccg ctcaaacgtt tgttgttgga acatggcgat gtggtggtat ggggcggtga
    11521 atcgcggctg ttttatcacg gtattcaacc gttgaaagcg gggttttatc cactcaccac
    11581 cgactgccgc tacaacctga cattccgtca ggcaggtaaa aaagaataaa aataagaatt
    11641 attattgctg tgcgcgcgaa gatgtttaaa ctgcgggctg taattcattg tccgggtttt
    11701 ctgcatggaa cttcttgtac ttgtctggcg gcagtatcgc tggccattta tcagtgtgat
    11761 ggcgctaagc ctcgccagtg cggcattagg cattggctta attgctttta tcaatcagcg
    11821 ccttatcgaa atggcggata ccagtctgct ggtattgccg gagtttctgg gattattgct
    11881 gctgttgatg gcagtcactc tcggatcgca actggcgctc accactttgg ggcatcactt
    11941 cgtttaccga ctgcgtagtg aatttatcaa gcggattctg gatacccacg tcgagcgcat
    12001 tgaacaactc ggtagcgcct cgttgttggc gggattaacc agcgatgtgc gcaatatcac
    12061 cattgctttt gtgcgtcttc cggaactggt gcaggggatc attctcacta tcggttccgc
    12121 ggcgtatctg tggatgctgt cgggcaaaat gttgctggta acggctatct ggatggcgat
    12181 caccatctgg ggtggttttg tactggtggc gcgggtgtac aaacatatgg cgaccctacg
    12241 tgaaaccgaa gacaagctgt acacggattt tcaaactgta cttgaagggc gcaaagagct
    12301 gactctgaac cgggaacgcg ccgagtatgt gtttaacaac ctctacatcc ccgatgcgca
    12361 agagtatcgc catcatatta ttcgcgcaga caccttccat cttagtgccg tgaactggtc
    12421 aaacatcatg atgctgggcg ctatcggcct ggtgttctgg atggcgaaca gtctcggttg
    12481 ggctgatacc aacgttgctg cgacctattc gttgacgctt ttattcctgc gtacgccgct
    12541 gctttcggcg gttggcgcat tgccgacgct gctgatggcg caggtggcgt ttaacaagct
    12601 gaacaaattc gcgctcgcgc ctttcaaagc agagtttccg cgcccgcagg cgtttcccaa
    12661 ctggcaaacg ctggagctgc gtaatgtgac gtttagctat caggataacg cgttttccgt
    12721 tggtccgatt aatctcacca tcaaacgtgg cgagctactg tttctgattg gtggtaacgg
    12781 tagtggaaaa tcgacgctgg cgatgttgtt gacgggcttg tatcagccac aaagcggcga
    12841 aatcttgctg gatggcaaac ctgtcagcgg cgaacaaccg gaagattatc gcaaactgtt
    12901 ttcggcagtg tttaccgatg tctggctttt tgatcaactg ctggggccgg agggtaaacc
    12961 cgctaacccg caactggttg agaagtggct ggcgcagctg aaaatggctc ataagcttga
    13021 gttaagcaac gggcgtattg ttaacctgaa gttatcaaaa gggcagaaaa aacgcgtggc
    13081 gctgttgctg gcgctggcag aagaacgcga tattatcctg ctggatgaat gggcggcgga
    13141 tcaggatcca cacttccgtc gtgagtttta tcaggtgttg ctgccgctga tgcaggagat
    13201 gggtaaaact attttcgcta tcagtcatga tgatcattac tttatccacg ccgaccgcct
    13261 gctggaaatg cgcaatgggc aacttagcga gctgacgggc gaagagcgcg atgccgcttc
    13321 gcgtgatgcc gttgcccgga cggcataata ttacgacgct gacctggcgg actgctgccg
    13381 tcaggtcaat atgctaaaaa tcccttcatt tctaataacc ctataattaa tcaacgaaat
    13441 tataatgttt ctaaaattag aatataattt ataaacatta tttaaatgtt gttacttaag
    13501 tgttaccttt gatgccgcgc aaatctcacc tgcaataaag cgactaaaag taaggcatta
    13561 acaagatgaa aaaagtgact gccatgctct tctcgatggc cgtggggctt aatgccgttt
    13621 cgatggcggc aaaagcgaaa gcgtccgagg agcaggaaac tgatgtactg ttgattggcg
    13681 gcggcattat gagcgccacg ttggggacct atttacgcga gctggagcct gaatggtcga
    13741 tgaccatgct ggagcgcctg gagggtgtcg cgcaggagag ttcgaacggc tggaataacg
    13801 ccggaaccgg gcattctgca ctgatggaac tgaactacac cccgcaaaac gccgatggca
    13861 gtatcagtat tgaaaaagca gtcgccatta acgaagcatt tcagatttcc cgccagttct
    13921 gggcgcacca ggtcgagcgc ggcgtgctgc gtactccgcg ttcatttatc aataccgttc
    13981 cgcatatgag ctttgtctgg ggcgaggata acgttaattt cctgcgcgcc cgttacgccg
    14041 cgttgcaaca aagctcgctg tttcgcggta tgcgttactc tgaagatcac gcgcagatca
    14101 aagagtgggc accgttagtg atggaagggc gcgatccgca acagaaagtg gcagccacgc
    14161 gtacggaaat tggtaccgat gtgaactacg gcgagatcac ccgccagtta attgcttcct
    14221 tgcagaagaa atctaacttc tcgctgcaac tcagcagcga agtccgcgcc ctaaagcgta
    14281 atgacgataa cacctggacc gttaccgttg ccgatctgaa aaatggcact gcacagaaca
    14341 ttcgtgccaa atttgtcttt atcggcgcgg gcggtgcggc gctgaagctg ttacaggaat
    14401 cggggattcc ggaagcgaaa gactacgccg gtttcccggt gggcggacag ttccttgttt
    14461 cggaaaaccc ggacgtggtt aatcaccatc tggcgaaggt ttacggtaaa gcatccgttg
    14521 gcgcaccacc gatgtcggtt ccgcatatcg atacccgcgt tctggacggt aaacgcgtag
    14581 tgctgtttgg gccatttgcc accttctcaa ccaaattcct caaaaacggt tcattgtggg
    14641 atctgatgag ttccaccacc acctctaacg tgatgccgat gatgcacgtc gggctggata
    14701 atttcgatct ggtgaaatat ctggtgagtc aggtgatgtt gagtgaagag gatcgttttg
    14761 aagcgttgaa agagtactat ccgcaggcga aaaaagagga ctggcgtttg tggcaagcgg
    14821 ggcagcgtgt gcagattatc aagcgtgatg ccgataaagg tggtgtactg cgtctgggta
    14881 ctgaagtggt cagtgaccag caagggacca ttgccgcgct cctgggagca tcgccagggg
    14941 cgtcaaccgc cgcgccgatt atgttggatc tgctggaaaa agtatttggc gatcgcgttt
    15001 ccagcccgca atggcaggct acgttgaaag cgatcgttcc gtcttatgga cgcaagctga
    15061 acggtgatgt agcggcaaca gaacgcgagt tgcagtacac cagcgaagtg ctggggctga
    15121 aatacgacaa gccgcaggca gcagatagta cgccaaaacc gcagttgaaa ccgcaacccg
    15181 ttcaaaaaga agtggcggat attgcgttgt aatgatgtgc cacatccggc atggtatgcc
    15241 ggatgtggcg tatactgata agacgcgcca gcgtcgcatc aggcaaccgg ctcgggcgtt
    15301 agatgttgga tgcggcgtaa ccgccttatc caaccaacgg ggtgccgtac ttcacaacag
    15361 tttagcgaac ttctgcgttg tcaattttct cttccgcctt ccagacgcgg tatttcacat
    15421 ctacattgtc tggcgtatac accacgatcg gcagcttgct gttgtaacgc agcattccag
    15481 catcgcccag atacgcggtg acaaatttct tctctttctt gccatccggg caggccatca
    15541 tcgtggaaac cggcgagcta actttatcaa agacataata atcatagccc cagccttcca
    15601 gcgttttgct ttccagcttc ccgccgagac gatgcaaatt gcaatcgact tccagcgtct
    15661 gaccgattaa cagttctact ttcagggtag attcatcttc ttgcggggtt aactgaatca
    15721 cctgacgctt catccctttt tcagcttgtg gataaggcgc gattttttcc agtggctgga
    15781 cgctttctgc cgcccaggcg gaagtggtag cgaaagcggc aaacaatact gcaggtagaa
    15841 tggtcttcat ttttttgctt tccttcttca tttataggtt ttcaccgatg atgtcgctga
    15901 aggttaacat attcataaga tttattaatt tgctttatga ataacttaaa gaatattcag
    15961 acaattttac ctgctctttt agtgttaaat tctgatgaga gaacaaacca gcagaaatat
    16021 ctctggtgaa ttaatcgcta tataaatatg tttataacca tttgaaatgt gagcaaaagc
    16081 ccgtttttgc cacgcttccc gccactcttt tgatcctgct acaggtttta ccccgatcgg
    16141 ggtatgcatc tttgacacat cctttaatat cttagcggtt ataaaaatgg cttattaatt
    16201 atgcggttta tttggtcgct ctcaattttc agagcgcgtt aatgatggaa ggtcaatgtg
    16261 aagattgatg catcccgtcg gggcatactc actggtcgct ggcgcaaagc cagtaacggt
    16321 atccgtccgc cctggtccgg tgatgaatct cattttctga cccattgcac ccgttgcgac
    16381 gcctgtatta atgcttgtga aaacaacatt ctgcaacgcg gcgcgggcgg ctatccgagc
    16441 gttaatttca aaaataacga gtgcagcttc tgttacgctt gcgcgcaggc ttgccccgaa
    16501 tcgctatttt ctccgcgcca caccagggcc tgggatttgc agttcaccat tggggacgcg
    16561 tgcctggcgt atcagtcagt tgaatgccgc cgctgtcagg atagctgtga gccaatggca
    16621 attatctttc gcccgacgct ctccgggatc taccagccgc aacttaatag ccaactttgc
    16681 aacggatgtg gagcatgtgc agccagctgt ccggtatcag ccataactgc ggagtatctc
    16741 catgcacact aactggcaag tttgcagcct ggtcgtgcag gccaaaagcg aacgaatttc
    16801 agacatcagc acccaactga acgcctttcc cggctgtgaa gttgctgtca gcgacgcgcc
    16861 gagcggtcag ttgattgtgg tggtggaagc agaagacagc gaaacgctga tccaaaccat
    16921 tgagtcagta cgcaacgtag agggcgtgct ggcggtgtcg ctggtttatc accagcagga
    16981 agagcaaggt gaggaaacac catgaaactc agtcgtcgta gctttatgaa agctaacgcc
    17041 gttgcggccg ctgcggcggc tgccggtctc agcgtgccgg gcgttgcccg cgccgttgtt
    17101 ggtcagcagg aagccatcaa atgggataaa gcgccgtgcc gtttctgcgg tactggttgc
    17161 ggcgttctgg tcggaacgca gcagggacgt gtggtggcct gtcagggcga cccagacgca
    17221 ccggttaacc gtggcctgaa ctgcattaag ggctatttcc tgcccaagat catgtacggt
    17281 aaagaccgtt tgacgcagcc gctgctgcgt atgaaaaacg gtaaatatga caaagaaggc
    17341 gaatttaccc taatcacctg ggatcaggcc ttcgatgtga tggaagagaa attcaaaacc
    17401 gccctgaaag aaaaagggcc ggaatcgatc ggtatgttcg gttctggtca gtggactatc
    17461 tgggaaggtt atgccgcgtc caagctgttt aaagcgggct tccgttcgaa caacatcgac
    17521 ccgaacgcgc gtcactgtat ggcgtcggca gtagttggct ttatgcgtac ctttggtatg
    17581 gatgagccga tgggctgcta tgacgacatc gagcaggctg acgcgtttgt gctgtggggc
    17641 gcaaacatgg cggagatgca cccgatcctc tggtcgcgca tcactaaccg tcgtctctct
    17701 aatcagaacg tcaccgtggc ggtgctttct acctaccagc atcgtagctt cgagctggcg
    17761 gataacggca tcatctttac gccacagtct gacctggtga tcctgaacta catcgccaac
    17821 tatatcattc aaaacaatgc gataaatcag gacttcttca gcaaacacgt taacctgcgc
    17881 aaaggggcga cggacattgg ctacggttta cgtccgaccc atccgctgga aaaagcagcg
    17941 aagaatccag gttctgacgc ctccgaaccg atgagctttg aagattacaa agccttcgtt
    18001 gccgagtata cgctggaaaa aactgccgaa atgaccggcg tgccgaaaga ccagttagaa
    18061 caactggcgc agctgtatgc cgatccgaac aagaaagtca tctcctactg gacgatgggc
    18121 ttcaaccagc atactcgtgg cgtgtgggct aacaacctgg tctacaacct gcacctgctg
    18181 accggcaaaa tttcccagcc gggttgcggt ccgttctccc tgaccgggca accttctgcg
    18241 tgtggtactg cgcgtgaagt gggcaccttt gctcaccgtc tgcctgcgga catggtggtg
    18301 accaacgaga aacaccgtga tatctgcgag aagaagtgga atatcccgag cggcaccatt
    18361 ccggcgaaaa tcggtctgca cgcggtggca caagaccgtg cgctgaaaga cggcaaactg
    18421 aatgtttact ggaccatgtg taccaacaac atgcaggccg ggccgaacat caatgaagag
    18481 cgtatgccgg gctggcgcga tccgcgcaac ttcatcatcg tctccgatcc gtatccgaca
    18541 gtcagtgcgc tggccgccga cttgatcctg ccgaccgcaa tgtgggtaga gaaagagggc
    18601 gcttacggta acgccgaacg ccgtactcag ttctggcgtc aacaggtaca ggcaccgggc
    18661 gaagcgaaat cggatctctg gcagttagtc cagttctccc gccgcttcaa aactgaagaa
    18721 gtatggccgg aagatctgct ggcgaagaaa ccggaactgc gtggcaaaac gctgtacgaa
    18781 gtgctgtatg ccacaccgga agtgagcaaa ttcccggtat ccgaactggc ggaagatcag
    18841 ctgaacgatg aatcccgcga gctgggcttc tatctgcaaa aagggctgtt cgaagagtac
    18901 gcatggtttg gtcgcggtca cggtcacgat ctggcaccgt tcgatgacta ccacaaagcg
    18961 cgcggtctgc gctggccggt ggtgaacggt aaagaaacgc agtggcgtta cagcgaaggt
    19021 aacgacccgt acgtgaaagc gggcgaaggc tataagttct acggcaaacc ggatggcaaa
    19081 gcggtgatct tcgcactgcc attcgaaccg gcggcggaag caccggatga agagtacgac
    19141 ctgtggctct ctaccggacg cgttctggag cactggcaca ccggcagtat gactcgccgt
    19201 gtaccagaac tgcaccgcgc cttcccggaa gcggtcctgt ttattcaccc gctggatgcg
    19261 aaagcgcgcg atctgcgtcg tggcgacaaa gtgaaagtgg tttctcgccg tggcgaagtg
    19321 atctcgattg tcgaaacgcg cggtcgtaac cgtccgccgc agggcctggt gtacatgccg
    19381 ttcttcgacg ccgcacagct ggttaacaaa ctaacgcagg acgcgaccga tccgctctcg
    19441 aaagagacgg acttcaagaa gtgcgcagtc aaactggaga aggtgtaagc cattatgtcc
    19501 cggtcagcga aacctcaaaa tggtcgccgc cgctttctgc gcgatgttgt tcgcacagca
    19561 ggcgggctgg ctgccgtggg tgtggcgctg gggttacaac agcaaaccgc acgcgcatct
    19621 ggcgtgcggt tgcgcccgcc cggagccata aacgagaacg cctttgccag tgcctgtgtg
    19681 cgttgcggtc agtgtgttca ggcttgccct tacgacacct taaaactggc gacgctggcc
    19741 tctggtctgt cggcgggcac gccatatttt gtcgcacggg atattccttg cgaaatgtgt
    19801 gaggacattc cgtgcgccaa agtgtgcccg agcggtgcgc tggatcgtga gatcgaatcg
    19861 atcgacgacg cgcggatggg gctggcggta ctggtggacc aggaaaactg tctcaacttt
    19921 caggggctgc gctgcgatgt ttgttatcgc gaatgcccga aaattgatga ggccatcacc
    19981 ctggagctgg agcgcaacac gcgtaccggt aagcacgccc gctttctgcc gacggttcac
    20041 agagacgcct gtaccggttg cggtaagtgc gaaaaagtgt gcgtgctgga acaaccggca
    20101 atcaaggtgt taccgctgtc actggctaaa ggggagttag gtcaccatta ccgcttcggc
    20161 tggctggagg ggaacaatgg caaatcgtaa acgtgacgcc gggcgcgagg cgctggagaa
    20221 aaaaggctgg tggcgcagtc accgttggct ggtgttacgt cgcctttgtc agttcttcgt
    20281 gctggggatg tttttgagcg gtccgtggtt tggtgtgtgg atcttacacg gtaactacag
    20341 cagtagcctg ttattcgaca ccgttccgct gaccgatccg ctgatgacgc tgcaaagtct
    20401 tgccagcggt catctgcctg ccacggtggc gttgaccggt gcggtgatta tcaccgtgct
    20461 ctacgccctg gcaggaaagc gattattttg cagctgggtc tgcccgctga atccgattac
    20521 cgacttagcg aactggttac gcaggcgctt tgacctcaat cagtctgcga cgatccctcg
    20581 ccacattcgc tacgtgctgt tggtggtcat tctgctggga tcggccttaa ctggcacgct
    20641 catctgggaa tggatcaacc ccgtatctct gatggggcgc agcctggtaa tgggcttcgg
    20701 cagcggcgcg ctgcttattc tcgcgctgtt tttatttgat ctactggtcg ttgaacacgg
    20761 ctggtgcggg cacatttgtc cggttggcgc gctgtatggc gtgctgggta gcaaaggtgt
    20821 gattaccgtt gcggccaccg atcggcagaa atgtaaccgc tgtatggatt gttttcatgt
    20881 ttgcccggaa ccgcgtgtgc tacgtgcccc ggtgctggat gaacaaagcc cggtgcaggt
    20941 caccagccgc gattgcatga cgtgcggtcg ctgcgtggat gtctgttctg aggatgtatt
    21001 tacaataact acacgatgga gttcgggagc gaaatcatga aaagccatga cctgaagaaa
    21061 gcgctgtgtc aatggacggc gatgctggcc ctggtggtaa gcggcgcggt ttgggcggct
    21121 aatggcgtcg attttagcca gtcgccggaa gtatccggga cacaggaagg ggccattcgg
    21181 atgccaaaag agcaggaacg gatgccgctg aactatgtga atcagccgcc aatgatcccg
    21241 catagcgttg aaggttatca ggtaacgacc aataccaacc gctgcttgca gtgccacggt
    21301 gtcgaaagtt atcgcaccac tggcgcgccg cgcattagtc ctactcactt tatggacagc
    21361 gacggcaaag tgggcgcgga agtggctccg cgtcgttatt tctgtctgca atgtcacgta
    21421 ccgcaggccg ataccgcgcc aatcgtgggg aataccttta ccccatcaaa aggttacggg
    21481 aaataagagg ttattatggg aaattctgac cgtaagcctg gtctgattaa gcgcctgtgg
    21541 aaatggtggc gtacccccag ccgtctggcg ctggggacgc tgctgttgat cggttttgtt
    21601 ggcggcatcg tcttctgggg tggctttaac accgggatgg aaaaagccaa taccgaagag
    21661 ttctgcatta gctgccacga aatgcgcaac acggtgtatc aggaatacat ggattccgtg
    21721 cactacaaca accgtagcgg cgtccgtgcg acctgtccgg attgtcacgt tccgcacgag
    21781 tttgtgccga agatgatacg caagctcaaa gcaagtaaag agctgtatgg taaaattttt
    21841 ggcgttattg acacgccgca gaaatttgaa gctcatcgtc tgacgatggc acagaatgag
    21901 tggcggcgca tgaaggacaa taactcgcag gagtgccgta actgtcacaa cttcgagtat
    21961 atggatacaa ccgcccagaa atcggttgcc gcgaagatgc atgaccaggc ggtgaaagat
    22021 gggcaaacct gtattgattg ccataaaggg atagcgcaca agctgcccga tatgcgtgaa
    22081 gtcgagccag gtttttaaca gggttattgc gtgggtatgc ttgaagccag agagttactt
    22141 tgtgagcggg atgaacgaac cttatttagt ggcttgtcat ttacgctgaa cgcaggagag
    22201 tgggtacaaa tcaccggtag caacggcgcg gggaagacaa cgcttctccg tttgctgacg
    22261 gggttgtctc gccctgacgc aggcgaggtt ctctggcaag ggcagccctt gcatcaggta
    22321 cgcgacagct accatcaaaa cctgttatgg ataggccatc agccggggat caaaacccgg
    22381 ctgacggcgt tagaaaatct gcacttttat catcgcgatg gcgataccgc acaatgtctg
    22441 gaagccctgg cgcaggccgg gcttgccgga ttcgaagata ttcctgtaaa tcagctctcg
    22501 gccgggcaac aacgccgcgt cgctttagcg cgtctgtggc tgacccgtgc cacgttatgg
    22561 atcctcgacg agccttttac cgcgattgac gttaacggcg tcgatcgtct gacccagcgt
    22621 atggcgcagc atacggagca gggggggatt gtgattctga ctacccacca gccgctcaac
    22681 gttgctgaaa gtaaaattcg ccgcatttca ctgacgcaaa cgagggccgc atgatgttct
    22741 ggcgcatttt ccgtcttgag ctgcgtgtag cgtttcgcca tagcgccgaa atcgccaacc
    22801 cgctgtggtt cttcctgatt gtaattaccc tttttccgct cagtatcggt ccggagccgc
    22861 aactgctggc gcgtattgca ccgggcatta tctgggttgc tgcgctgctt tcatccttgc
    22921 tggcgctgga acgactgttc cgtgacgatt tgcaggacgg cagtcttgaa caattgatgt
    22981 tgttgccgtt acccttgccc gccgttgtgc tggcgaaggt gatggcgcac tggatggtaa
    23041 ccggtctgcc gttactcatc ctttcgccac tggtagcaat gctactggga atggatgttt
    23101 atggctggca agtgatggcg ctgacgctgc tgctgggaac gcctacgctt ggctttctcg
    23161 gtgcaccggg tgtggcgttg acagtgggac ttaagcgcgg tggtgtgctg ctcagcatac
    23221 tggtgttacc gctgactatc ccattactca tctttgccac cgccgcgatg gacgcggctt
    23281 ccatgcattt gcccgttgac gggtatctgg caattttagg cgcgttgctg gcaggcaccg
    23341 cgacattaag tccttttgcg acggcggcag cgttacgaat cagcattcaa taacgctgga
    23401 ttactgattt ttgttcgagt ctggtatcga aactatgtgg aaaacactgc atcaactggc
    23461 gatcccacca cggctgtatc aaatctgtgg ctggtttata ccgtggctgg caattgccag
    23521 tgtggtcgtg cttaccgtcg gctggatctg gggattcggc tttgctccgg ctgattatca
    23581 gcagggaaat agctaccgca ttatctacct gcatgtgcct gcggcgatct ggtcgatggg
    23641 tatttatgca tcaatggcgg tggcggcgtt tattggcctt gtctggcaga tgaaaatggc
    23701 caacctggcg gtggcggcga tggcccccat tggtgccgtg tttaccttta ttgccctggt
    23761 taccggctct gcatggggaa aaccgatgtg gggcacctgg tgggtatggg atgcacgtct
    23821 gacttctgaa ctggtgctgc tgtttttgta tgtgggtgtg attgccctgt ggcacgcctt
    23881 cgacgaccgc cgtctggcgg gccgtgcggc aggtatcctg gtgctgattg gcgtggtgaa
    23941 tctgccgatt attcattact ccgtggagtg gtggaacacc ctgcatcagg gatcaacgcg
    24001 gatgcagcaa agtatcgatc cggcgatgcg ttcgccgctg cgctggtcga tttttggctt
    24061 cctgctcctg tctgccacgc tgacgctgat gcggatgcgt aatttgattt tgctgatgga
    24121 aaaacgccgt ccgtgggtga gtgaactgat actgaaaaga ggccgtaaat gacccttgca
    24181 tttgcttcct ggaatgaatt tttcgcaatg ggcggttacg ccttttttgt ctggctggcg
    24241 gtggtgatga ccgttattcc gctggtggtt ttggtcgtgc actcggtgat gcagcatcgc
    24301 gcaattctgt gtggtgtgga gcaacagcgg gcgcgtgagg cgcgtttacg tgctgcgcaa
    24361 cagcaggagg ctgcatgaat attcgccgta aaaaccgctt gtggattgcc tgtgctgtgt
    24421 tggcaggttt ggcgctgacc atcggtctgg tgctgtatgc gctgcgctcg aatatcgatc
    24481 tcttttatac gccgggggaa attctctacg gcaagcgtga aactcagcaa atgccggaag
    24541 tcggtcagcg tctgcgcgtt ggcgggatgg tgatgccggg tagtgtgcag cgcgatccca
    24601 attcgctgaa agtgaccttc accatttacg acgctgaagg ctcagtggat gtctcttacg
    24661 aaggcatttt gccggatctg ttccgtgaag ggcagggcgt tgtggtgcag ggcgagctgg
    24721 aaaaaggcaa tcatatcctc gcgaaagaag tgctggcgaa acacgacgaa aactacacgc
    24781 cgccagaagt tgagaaagcg atggaagcta accaccgtcg cccggcgagt gtttataagg
    24841 acccagcatc atgatgccgg aaattggaaa cgggctgctg tgcctggcgc tgggaattgc
    24901 gctgctgctg tccgtgtatc cgctatgggg cgtggcgcgc ggagatgcgc gcatgatggc
    24961 gtcttcccgc ttgtttgcct ggatgctgtt tatgtctgtg gctggcgcat ttctggtgct
    25021 ggtcaatgct ttcgtggtca acgactttac cgtcacctat gttgccagca actccaatac
    25081 ccagcttccg gtgtggtatc gcgtggcggc tacctggggc gcgcatgaag gttcgcttct
    25141 gctgtgggtg ctgctgatga gcggctggac ctttgcggtg gcgattttta gtcagcgtat
    25201 tccgctggat attgtggccc gtgtactggc gataatgggg atggtcagcg tcggcttttt
    25261 gctgttcatt ctctttacct ctaacccgtt ctcacgcacg ctgccgaact tcccaattga
    25321 agggcgcgat cttaacccgc tgttacagga tccggggctg atcttccatc cgcctctgct
    25381 ttatatgggg tacgtgggtt tctcggtggc gtttgctttt gccattgcca ttgcttcttt
    25441 gctgagcggg cgtctggaca gcacttatgc gcgttttact cgcccgtgga cgctggcggc
    25501 gtggattttc ctgacgctcg gcattgtgct cggttccgca tgggcctatt acgaactcgg
    25561 ctgggggggc tggtggttct gggatccggt agaaaacgcc tcgtttatgc cgtggctggt
    25621 ggggactgcg ctgatgcact cactggcggt cactgaacaa cgcgccagct tcaaagcgtg
    25681 gacattactg ctggcaatca gtgccttctc gttgtgtctg ctggggactt tcctggtgcg
    25741 ttccggcgtg ctggtatcgg tacacgcgtt tgcctctgat ccggcacgcg gtatgtttat
    25801 cctcgccttt atggtactgg tgattggtgg ttcgctgctg ctgtttgccg cgcgtggaca
    25861 caaagttcgc tcacgcgtaa acaatgcgct gtggtcgcgg gaatctctgc tgttagcgaa
    25921 caacgttttg ttggtcgccg cgatgctggt ggtattactg gggacgctgc tgccgctggt
    25981 gcacaagcaa ctgggactgg gcagtatttc gattggcgaa ccgttcttca acaccatgtt
    26041 tacctggctg atggtgccgt ttgcgctgct gcttggtgtc ggtcctctgg tgcgctgggg
    26101 gcgcgatcgc ccacgtaaaa tccgcaattt attgattatc gccttcatct caacgctggt
    26161 gctgtcgctg ctgctgccgt ggctgttcga aagcaaagtt gtggcgatga cggtgctcgg
    26221 cctggcaatg gcctgctgga ttgctgtgct ggcaattgcg gaagctgcgc tgcgtatttc
    26281 acgtggcacg aaaaccacct tcagttattg gggaatggtg gcggctcacc tggggctggc
    26341 agtgacaatt gttggtattg cctttagcca gaactatagc gttgagcgtg atgtgcgcat
    26401 gaagtccggc gatagcgtcg atattcatga atatcgcttc accttccgtg atgtcaaaga
    26461 ggtgactggc ccgaactggc gcggcggtgt ggcgactatt ggcgtaacgc gagagggtaa
    26521 accggaaacg gtgctgtatg cggaaaaacg ttattacaac actgccgggt cgatgatgac
    26581 cgaagcggcg attgacggcg gcatcacgcg tgacctgtac gccgcgctcg gtgaagagct
    26641 ggaaaacggc gcgtgggccg tgcgtcttta ctacaaaccg tttgttcgct ggatttgggc
    26701 gggcgggctg atgatggcgt tgggcggact gctgtgtctg tttgatcctc gctatcgtaa
    26761 gcgcgtgagt ccgcaaaaaa ctgcgccgga ggctgtatga agcgcaaagt attgttaatt
    26821 ccgttgatta tcttcctggc gattgccgcg gcgctgctgt ggcagctggc gcgtaatgcc
    26881 gaaggggatg atccgaccaa tctggaatcg gcgctcattg gcaagccagt gccgaagttt
    26941 cgcctcgaat cactggacaa tccggggcag ttttatcagg cggatgtgct gactcagggc
    27001 aaacctgtgc tgcttaacgt ttgggctacc tggtgtccga cctgccgtgc ggaacatcaa
    27061 tatctgaatc agctttctgc gcagggcatt cgcgtggtcg gcatgaacta taaagacgat
    27121 cgccagaagg caataagctg gctgaaagag ctgggcaatc cttacgcgct aagcctgttt
    27181 gatggcgatg gcatgttagg gctggatctc ggtgtctatg gcgcgccaga aacgttcctc
    27241 atcgacggca acggcatcat tcgctatcgc catgcgggcg atctcaatcc tcgcgtctgg
    27301 gaagaagaga tcaagccgct gtgggagaaa tacagtaagg aggccgcaca atgaggtttt
    27361 tattgggcgt gctgatgctg atgatctccg gctcagcgct ggcgaccatc gacgtgttgc
    27421 agtttaagga tgaagcgcag gagcagcagt tccgccaact cactgaagaa ctacgctgcc
    27481 cgaaatgcca gaacaacagc attgccgatt ccaactcgat gattgccacc gacctgcgcc
    27541 agaaagtgta tgaactgatg caggaaggta aaagtaaaaa agagattgtc gattatatgg
    27601 tggcgcgtta cggcaacttc gtcacttacg atccgccgtt aacgccgctg accgtgctgc
    27661 tgtgggtgct tccggtagtg gctattggca ttggcggttg ggtcatttac gcccgttcgc
    27721 ggcgtcgggt acgcgtggtg ccggacgcgt ttcctgaaca aagcgtgccg gaaggtaagc
    27781 gtgccggata tattgtttat ctgccgggta ttgtggtggc gttaattgtg gctggcgtca
    27841 gctactacca gactggcaat tatcagcagg tgaaaatctg gcagcaggcc acggcacagg
    27901 ctccggcgtt gctggacagg gcgctggatc cgaaagccga tccgctcaac gaagaagaga
    27961 tgtcgcgtct tgcgctgggg atgcgtactc aactgcaaaa aaatccggga gatatagaag
    28021 gctggattat gttgggccgc gttggcatgg cgctgggtaa cgccagtatc gccaccgatg
    28081 catacgctac tgcgtatcgc ctcgatccga aaaacagtga tgccgcactg ggttatgctg
    28141 aagcgttgac acgttcatct gatcccaacg acaaccgcct cggtggtgaa ctgctgcgcc
    28201 agttggtgag aacggaccat agcaatatcc gtgtgttaag catgtatgcg tttaatgcct
    28261 ttgagcagca gcgatttggc gaagccgttg ccgcgtggga gatgatgttg aaactcttat
    28321 ctgccaacga tactcgccgt gcggtgattg aacgtagtat cgcgcaggcg atgcaacatt
    28381 tgtcgccgca ggagagtaaa taaaaagagg cccgatggtg atgccatcgg gctattttta
    28441 ttgtgccccg cgttgttgca ggaacagaat ggtggctgcc acgcgtgagc ggacattgag
    28501 tttgcgcagc agattgcgaa tatgtacttt tactgtctgc tctgaaatat tcaacaccga
    28561 ggcaatctgt ttatttgaca gcccctgtgc cagctcgtgc agaacatcca gctcgcgctc
    28621 cgtcagcacg ctgaagggat cttcttccgc gccaaacatt tcacgttcac gtaagtactg
    28681 attgacgcgt tcgctaaaga ctttgctgcc tttcgctcca gcacgaattg cttccagcaa
    28741 tacttccggg tcgctgtctt tcaacagata accgtctgcg cctgcgtcta tcagcgcaaa
    28801 gacatcgctg gaggcatctg atacggtcag gataataatt tgcgcggtaa cgccatccct
    28861 gcgcaaggca ttgagggtat ccaggccact catacctttc atattgagat ccagcaagat
    28921 cacgtcgata tccagtctat ttgccagatc gatcgcgctc gcgccgtcgc ccgcttcggc
    28981 gaccacttca aagctaggat caagctccag taactgacga acaccgcgtc gcataagtgg
    29041 atgatcatcc acaatcatca cctgaaaagg cgttgcttca ggcatagtag tctcctgggg
    29101 ttttattaga atcattatgt ttgagcgtag cgttggtaac gctaccaggc gcgtgaatgt
    29161 taccccattt tatgtatgga catgtagtga aaactacaac ctt
//
LOCUS       DADMIB010000034        29079 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.034, whole genome shotgun sequence.
ACCESSION   DADMIB010000034 DADMIB010000000
VERSION     DADMIB010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29079)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29079)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29079
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.034"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..99)
                     /locus_tag="JNZ89_001446"
     CDS             complement(<1..99)
                     /locus_tag="JNZ89_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HAY8935366.1"
                     /translation="MLNTVKISSCELINADCLEFIRSLPENSVDLIV"
     gene            complement(207..447)
                     /locus_tag="JNZ89_001447"
                     /pseudo
     CDS             complement(207..447)
                     /locus_tag="JNZ89_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309113.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(674..1495)
                     /locus_tag="JNZ89_001448"
     CDS             complement(674..1495)
                     /locus_tag="JNZ89_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitermination protein"
                     /protein_id="HAY8935367.1"
                     /translation="MKLEDLPKYYSPKSPGLTDASASTSKDALSITDVMAAQGMTQNR
                     AEMGFSAFLGKMGISMNDRERATELLTEYALSRCDRVAALRKLPAEIKPVVMRIMASY
                     AFEDYARSAASKKQCPCCYGEKFIESVVFTNKVQYPDGKPPVWAKCTKGVYPSYWEEW
                     KKVREVVKVACPECGGKGEVSTACKDCRGRGVAIHREESVKRGMPVIRDCQRCGGRGC
                     ERLPSTEAFNAICKVTSAITLDTWKKSVKRFYDTLVVRFDIEEAWAERQLKRVTR"
     gene            complement(1492..1872)
                     /locus_tag="JNZ89_001449"
     CDS             complement(1492..1872)
                     /locus_tag="JNZ89_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000140009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HAY8935368.1"
                     /translation="MTERIEFVLPYPPTVNTYWRRRGSTYFVSKAGERYRRAVALIVR
                     QQRLKLSLSGRLAIKIIAEPPDKRRRDLDNILKAPLDALTHAGLLMDDEQFDEINIVR
                     AQPVSGGRLGVKIYPIMLEGQVKK"
     gene            complement(1873..2856)
                     /locus_tag="JNZ89_001450"
     CDS             complement(1873..2856)
                     /locus_tag="JNZ89_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707877.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HAY8935369.1"
                     /translation="MPVFHNTRVLVEPEPKSMRNLPSGVVPAVRQPLAEDKSLLPFFS
                     DERVIRAAGGAGALSDWLLRHVKSCQWPHGDYHHSETVIHRYGTGAMVLCWHCDNQLR
                     DQTSESLGQLAHQNLFAWMIDVIRHAMNGSQERELSLAELSWWAVRNQVADALPEAVL
                     RRSLGLRAEKIRSMYRESDIVPGEQTATSILKQRTKNLAPLPHAHQQNPPQEKTVVSI
                     AVDPESPAQYLQRQKSQREEMPVYTRWVKTQKCMTCGNQADDPHHIIGHGLGGMGTKA
                     DDLFVIPLCRKCHSELHAGVKDFEEKHGSQLLLLIRFLMHARNSGVLKWKA"
     gene            complement(2930..3202)
                     /locus_tag="JNZ89_001451"
     CDS             complement(2930..3202)
                     /locus_tag="JNZ89_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935370.1"
                     /translation="MAHKTKFHNSDTDLAIRHGRRSHAFKTDWYQHPPCTEEQAEWLI
                     HNYRRRGYEIKKALSLDYRHWIISVRLPYSERPPRPSRTFQQRIWR"
     gene            complement(3370..3582)
                     /locus_tag="JNZ89_001452"
     CDS             complement(3370..3582)
                     /locus_tag="JNZ89_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY8935371.1"
                     /translation="MSHKCRLASYVPKGKGKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFTAYEPEE"
     gene            complement(3763..4428)
                     /locus_tag="JNZ89_001453"
     CDS             complement(3763..4428)
                     /locus_tag="JNZ89_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HAY8935372.1"
                     /translation="MTIADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDY
                     TIFFYNPNIHPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGI
                     RCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNECGRRAVAHYPGMVYWD
                     YNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKE
                     EKE"
     gene            complement(4603..5028)
                     /locus_tag="JNZ89_001454"
     CDS             complement(4603..5028)
                     /locus_tag="JNZ89_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016232644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HAY8935373.1"
                     /translation="MAKVFTQEEREKIKGQVVELVRLSGRETLRQLEAKTGATRYLMS
                     VLARELVASGDVYNSGYGLFPSEQARKDWQNARKKLSRAKVKKPAVVDPDLIWSLPDG
                     EIRRYDRRLNIICRECRKSEAMQRVLAFYQGNVRYFRRY"
     gene            complement(5044..5814)
                     /locus_tag="JNZ89_001455"
     CDS             complement(5044..5814)
                     /locus_tag="JNZ89_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1627 domain-containing protein"
                     /protein_id="HAY8935374.1"
                     /translation="METVSDALKALKKASSHVVAARLGISREEAVNELWELKRKGVVD
                     KTGHTWFLAGEGESRVTEERPVKSEAQDMLTGEVEQKVTADMMIEFIGQDGAKTCEEL
                     AGKFGVSTRKVASTLAVVTATGRLARVNQNGKFRYCMPGDNLPAEPKAALVTESDGKA
                     FPQPAGAALPVREAATQEEIKTETVADIVQPLPSFTETQADELIFPSLRRANLALRRA
                     KSDVQKWERVCAALRELNKHRDIVRQITDSSRRVVSEK"
     gene            complement(5836..6578)
                     /locus_tag="JNZ89_001456"
                     /pseudo
     CDS             complement(5836..6578)
                     /locus_tag="JNZ89_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309101.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(6585..7547)
                     /locus_tag="JNZ89_001457"
     CDS             complement(6585..7547)
                     /locus_tag="JNZ89_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310303.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8935375.1"
                     /translation="MSSKLHGLVWEGCAFTGMILSRVAVMARLADYSNDEGVSWPAIE
                     TIRRQIGARSESTVKSAIAELAKEGWLTKEERKVGGRNVSNIYRLNVEKLEAAAAAAR
                     ESYKPKRKISPAKNDPLTVDPSNIDPSTVDPSNFDGSTVDKKLPIRGAMIDPDPSVLK
                     PDPSDKRSSCPDASQPDPQTAEQDFLTRHPDAVVFSAKKRQWGSQEDLVCAQWIWGRI
                     VSLYEQAASYDGEITRPKEPNWTAWANDVRTMRMLDGRTHRQICEMFGRLQRDSFWVK
                     NIMSPAKLREKWDELVIRLGRSPAQRCVNHISEPDTEIPPGFRG"
     gene            complement(7570..7995)
                     /locus_tag="JNZ89_001458"
     CDS             complement(7570..7995)
                     /locus_tag="JNZ89_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HAY8935376.1"
                     /translation="MKIKHEHIRMAMNAWAYPDGEKVPAAEIARTYFELGMTFPELYD
                     DSHPEALARNTQKIFRWLDKDPPDAVEKMQALLPAIEKAMPPLLVARMRSHSSEYYRE
                     IVERRDRLVKDVDDFVASAVVLYDQMNRGGPAGNAVVMH"
     gene            complement(7979..8302)
                     /locus_tag="JNZ89_001459"
     CDS             complement(7979..8302)
                     /locus_tag="JNZ89_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8935377.1"
                     /translation="MKKDNYSFKRACAVVGGQSAMARLLGVSPPSVNQWIKGVRQLPA
                     ERCPAIERATKGGVLCEELRPDVDWTYLRRSSCYSQNMSMKQPNDENDHTRSIKRQMI
                     HENQT"
     gene            8427..8903
                     /locus_tag="JNZ89_001460"
     CDS             8427..8903
                     /locus_tag="JNZ89_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935378.1"
                     /translation="MLSGKDLGRAIEQAINKKIASGAVKSKAEIARHFKVQPPSIHDW
                     IKKGSISKDKLPELWRFFSDVVGPEHWGLNEYPIPTPSTSDTKSELLDINSLYQAASD
                     EKKAIVAFILSGNATEPSWVDYDVRAYIAAMEMKVANYLKNQESKRKSQNITKTGT"
     gene            9141..9374
                     /locus_tag="JNZ89_001461"
     CDS             9141..9374
                     /locus_tag="JNZ89_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 domain-containing protein"
                     /protein_id="HAY8935379.1"
                     /translation="MTAGFNFNNYAAGFCSATPALRGNEVSMDTIELGNSESLVCGVF
                     PNQDGTFTAMTYTRSKTFKTEAGARRWLTRNTD"
     gene            9386..9706
                     /locus_tag="JNZ89_001462"
     CDS             9386..9706
                     /locus_tag="JNZ89_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935380.1"
                     /translation="MEFKDLPVPFQEMASNVVRSQLATLDLSTVEKETIDNISGNVRR
                     AFIGLYEEKQLSDNQDLHEKYFLDLMDIIDKGFGLLMKKKGIRIEPLENYFATKSINS
                     FDSK"
     gene            complement(9684..10121)
                     /locus_tag="JNZ89_001463"
     CDS             complement(9684..10121)
                     /locus_tag="JNZ89_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001351093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935381.1"
                     /translation="MNQLPRRALSRYGLTFQGNILSVNCQCRMLTRVRRTHSTSPVEN
                     SLITNPQEGEMSTENDEIINSLIRQINNFDKALQHAAARSDITLLAISFLASVMDKNE
                     VVRQSLVDYIDSLQPGTFNHESFNHEKEHVKSVINSLILNQKN"
     gene            10521..10709
                     /locus_tag="JNZ89_001464"
     CDS             10521..10709
                     /locus_tag="JNZ89_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000854559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibition protein DicB"
                     /protein_id="HAY8935382.1"
                     /translation="METLLPNINTSEGCFEIGVTISNPVFTEDAINKRKHERELLNKI
                     CILSMLARLRPIQKGCWQ"
     gene            10706..10897
                     /locus_tag="JNZ89_001465"
     CDS             10706..10897
                     /locus_tag="JNZ89_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1482 family protein"
                     /protein_id="HAY8935383.1"
                     /translation="MNTAFALVLTVFLVSGEPVDIAVSVHRTMQECVTAATEQKIPGN
                     CYPVDKVIHQDNNEIPAGL"
     gene            10990..13461
                     /locus_tag="JNZ89_001466"
     CDS             10990..13461
                     /locus_tag="JNZ89_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease"
                     /protein_id="HAY8935384.1"
                     /translation="MSKVFICAAIPDEQAIKEEGAVAVATAIEAGDERRARAKFHWQF
                     LEHYPAAQDCAYKFLVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPM
                     NVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEV
                     NAMYPELKLHAIGWVKHKCKPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARA
                     RTNQQHSENSTGKISPVIAAIHREYKQTWKTLDDELAYALWPGDVDAGNIDGSIHRWA
                     KNEVIDNDREDWKRISASMRKQPDALRYDRQTIFGLVRERPIDIHKDPVALNKYITEY
                     LTTKGVFEDEGRNQSATDTLSSPVPETDAVETAIPGNEKTECKVEVEPSVEREGPFYF
                     LFTDKDGEKYGRANKLSGLEKALALGATEITKEEYFARKNGTYSGSQQNTGASDTTAQ
                     PEPVKVTADEVNKIMQAANISQPDADKLLAASRGEFVAGISDPNDPKWVKGIETRDSV
                     NQNQQESEQNDQKAEQNSPNTQQNEPETKQPEPVAQQEPEKVCTACGQSGGGNCPDCG
                     AVMGDATYQETFDEENQVEVQENDPKEMEGAEHPHKENAGSAQDHASDSETGETADPL
                     IAMNGHHVITSTSRTCDHLMIDLETMGKNPDAPIISIGAIFFDPQTGDMGPEFSKTID
                     LETAGGVIDRDVIKRWLKQSREAQSAIMTDEIPLDDALLQLREFIDENSGEFFVQVWG
                     NGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVELGKAIDFDARTAIPFEGERHNA
                     LDDARYQAKYISVIWQKLIPNQADF"
     gene            13526..13774
                     /locus_tag="JNZ89_001467"
     CDS             13526..13774
                     /locus_tag="JNZ89_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase"
                     /protein_id="HAY8935385.1"
                     /translation="MARLILLTEWAKEEFSEPVPTPSTLSKYAKAGMIFPLPKKVGRR
                     WRVDPQARFVGMVNKPEVIATDHPALKRILEDGAPAKI"
     gene            13752..14882
                     /locus_tag="JNZ89_001468"
     CDS             13752..14882
                     /locus_tag="JNZ89_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8935386.1"
                     /translation="MARPRKYKTDVPGLSPYFDKRNNKVYWRYRHPITGKNHGLGSID
                     QKLAETIAAEANSRLARQQMEQMLSLQEKIISDTGGSSTVTIFLNNYRKIQQERYENG
                     EIKLNTLKQKAAPLRVFDERFGTRRLDAITVKDVVSVLEEYKARGHNRMGQIFRKVLI
                     DVFREAQQTGDVPPGFNPAESAKKPQVRISRQRLTFDEWMMIYNAAEKDGYFLQRGML
                     LALMTGQRLSDICKMQFSDIRDGYLHVEQQKTGTRIAIPLALRCDKLNLTLDDVVSSC
                     RDCVLSPWLLHHHHAKGTAKRGGMVKPATLTVAFKKARDSVDYNWRANGTPPSFHEQR
                     SLSERLFREQGVDTKILLGHSNQKMTDIYNDARGKEWKKLVI"
     gene            complement(14928..15566)
                     /gene="ompW"
                     /locus_tag="JNZ89_001469"
     CDS             complement(14928..15566)
                     /gene="ompW"
                     /locus_tag="JNZ89_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
                     /protein_id="HAY8935387.1"
                     /translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG
                     TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP
                     TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
                     VDYLINRDWLVNMSVWYMDIDTTAKYKSGVTTVKDSVRLDPWVFMFSAGYRF"
     gene            15806..15895
                     /locus_tag="JNZ89_001470"
                     /pseudo
     CDS             15806..15895
                     /locus_tag="JNZ89_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460692.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            15923..16666
                     /locus_tag="JNZ89_001471"
     CDS             15923..16666
                     /locus_tag="JNZ89_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0259 family protein"
                     /protein_id="HAY8935388.1"
                     /translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS
                     DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVIL
                     IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL
                     APVMLVQDKMGIFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI
                     GAVLANTLSNLISAVLLIYLFRLYMLIRQ"
     gene            16696..17235
                     /locus_tag="JNZ89_001472"
     CDS             16696..17235
                     /locus_tag="JNZ89_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HAY8935389.1"
                     /translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF
                     RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ
                     RMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
                     FTLLSGIYIYRHMPQEDKS"
     gene            17340..17738
                     /gene="yciA"
                     /locus_tag="JNZ89_001473"
     CDS             17340..17738
                     /gene="yciA"
                     /locus_tag="JNZ89_001473"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HAY8935390.1"
                     /translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
                     LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASE
                     PIGQRYKATEALFKYVAVDPEGKPRALPVE"
     gene            complement(17778..18506)
                     /gene="tonB"
                     /locus_tag="JNZ89_001474"
     CDS             complement(17778..18506)
                     /gene="tonB"
                     /locus_tag="JNZ89_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707161.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein TonB"
                     /protein_id="HAY8935391.1"
                     /translation="MTSMTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAP
                     AQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPK
                     PKPVKKVQEQPKRDVKPVESRPASPFENTALARLTSSTATAATSKPVTSVASGPRALS
                     RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRY
                     EPGKPGSGIVVNILFKINGTTEIQ"
     gene            18721..19017
                     /locus_tag="JNZ89_001475"
     CDS             18721..19017
                     /locus_tag="JNZ89_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009448315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HAY8935392.1"
                     /translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
                     AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF"
     gene            19317..20570
                     /gene="kch"
                     /locus_tag="JNZ89_001476"
     CDS             19317..20570
                     /gene="kch"
                     /locus_tag="JNZ89_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HAY8935393.1"
                     /translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN
                     LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY
                     TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY
                     LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT
                     SIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP
                     EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCLAILALSDNDADNAFVVLSAKD
                     MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL
                     NSGHGIFSDNDEQETKADSKESAQK"
     gene            complement(20625..20798)
                     /locus_tag="JNZ89_001477"
     CDS             complement(20625..20798)
                     /locus_tag="JNZ89_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciY family protein"
                     /protein_id="HAY8935394.1"
                     /translation="MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILN
                     KQRNSLLFAIYNI"
     gene            20941..22401
                     /gene="cls"
                     /locus_tag="JNZ89_001478"
     CDS             20941..22401
                     /gene="cls"
                     /locus_tag="JNZ89_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HAY8935395.1"
                     /translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII
                     YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP
                     LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQ
                     VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR
                     MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY
                     SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAR
                     EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG
                     VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ
                     DDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL"
     gene            22436..22765
                     /locus_tag="JNZ89_001479"
     CDS             22436..22765
                     /locus_tag="JNZ89_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309775.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HAY8935396.1"
                     /translation="MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEE
                     RGGAELFDPVEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKL
                     CHIIWRE"
     gene            complement(22818..23822)
                     /gene="oppF"
                     /locus_tag="JNZ89_001480"
     CDS             complement(22818..23822)
                     /gene="oppF"
                     /locus_tag="JNZ89_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HAY8935397.1"
                     /translation="MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVT
                     LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGIKPDEWRAVRSD
                     IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINR
                     YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL
                     IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE
                     KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
                     "
     gene            complement(23819..24832)
                     /gene="oppD"
                     /locus_tag="JNZ89_001481"
     CDS             complement(23819..24832)
                     /gene="oppD"
                     /locus_tag="JNZ89_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppD"
                     /protein_id="HAY8935398.1"
                     /translation="MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTTVNDLNF
                     SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLR
                     AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK
                     RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
                     NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD
                     AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTLGRLCACFKPVE
                     ELL"
     gene            complement(24844..25752)
                     /gene="oppC"
                     /locus_tag="JNZ89_001482"
     CDS             complement(24844..25752)
                     /gene="oppC"
                     /locus_tag="JNZ89_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HAY8935399.1"
                     /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFIHNRAAVASLM
                     VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGR
                     ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
                     GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNV
                     LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
                     GFLVVTLFCFNFIGDGLRDALDPKDR"
     gene            complement(25767..26687)
                     /gene="oppB"
                     /locus_tag="JNZ89_001483"
     CDS             complement(25767..26687)
                     /gene="oppB"
                     /locus_tag="JNZ89_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HAY8935400.1"
                     /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE
                     VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA
                     AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHW
                     LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
                     IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGALTILFNAIVDVLYAVIDPKIRY"
     gene            complement(26773..28404)
                     /gene="oppA"
                     /locus_tag="JNZ89_001484"
     CDS             complement(26773..28404)
                     /gene="oppA"
                     /locus_tag="JNZ89_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HAY8935401.1"
                     /translation="MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRN
                     NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHL
                     RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDL
                     GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT
                     LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPI
                     ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA
                     QGDMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYN
                     TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT
                     SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV
                     YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH"
     gene            28695..28991
                     /locus_tag="JNZ89_001485"
     CDS             28695..28991
                     /locus_tag="JNZ89_001485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935402.1"
                     /translation="MRFLLANTFCKIVKQFSFIDRIRIYSLHPCLNKHLSIQSNRDWL
                     SMSIFSDYSFSIEMHNNLTIDYYLALSSTKGSGITNIISIILQQAQDYDVAKIT"
BASE COUNT         7486 a         7292 c         6769 g         7532 t
ORIGIN      
        1 gactatcagg tcaacagaat tttcgggtaa cgaccggata aattccaggc agtcggcgtt
       61 gattaactca caactggata tttttacagt attaagcatg gatcattaag cctgtctctg
      121 ataggctcat tctgcttttg cgcaaagcag tgggcctgag gtttgcttgt gaacccaacg
      181 catgagcaga tggctggtgg gtgcccctaa cacccaccag ccgcccattt accacaaata
      241 aaaaagcctt cactgcggaa ggcgtctgta acaaccgaac tgatagtctg ccagacccgc
      301 cataaccagc tgggtcagta ttaactggca gcgttcgcgt gaaaggtaag tattctgtgc
      361 aatctccccg actgtcgccg gttcggtaac gcttaattca ttaaacacca ctctggcggt
      421 ttctgtcata tcctgctgtt ttagcatgtc tttttccctt ttccggttaa cgtgacacac
      481 caataactct tgtcgaaaaa gccagcaagc tgaaagacag gtattcaccg ccaccagcgc
      541 gtttactgta ctgacgcgat ttcagtcata aaaaacccgc caggcggcgg ggtgtaaaaa
      601 atcttctaac gtcaggcata aaacgcccat cgttagagca aatttaccac agattcggga
      661 aaaatcaaca acactatcgc gttaccctct ttaactgccg ctccgcccat gcctcttcaa
      721 tgtcaaaccg aaccaccaac gtatcgtaaa agcgtttcac tgattttttc cacgtatcaa
      781 gcgtgatagc actcgtcact ttgcatatgg cattaaatgc ctccgttgat ggtagtcttt
      841 cacagccacg accaccacaa cgctggcagt ctctgataac aggcatacca cgttttaccg
      901 actcttcacg atgaatggcg acaccacgcc cacggcaatc cttacaggcg gtggaaacct
      961 caccctttcc gccacactcc ggacaggcaa cttttaccac ctccctgact tttttccatt
     1021 cttcccagta agacggatac acacctttcg tacactttgc ccataccggc ggcttaccat
     1081 ccggatactg gaccttgttt gtaaaaacta cgctttcaat aaatttttcc ccatagcaac
     1141 aagggcactg ctttttactc gctgcgctgc gggcataatc ctcaaaagcg tacgaagcca
     1201 taatgcgcat cactaccggt tttatttctg ccgggagttt tcttaacgcc gccacgcgat
     1261 cacaccgact gagtgcatat tctgtcagca attctgttgc ccgctctctg tcattcatac
     1321 taatgcccat tttcccaagg aacgcagaaa accccatctc agcccgattc tgtgtcatgc
     1381 cctgcgcggc catcacatca gtgatactca gcgcatcttt cgacgttgag gccgatgcat
     1441 cagtcaggcc gggggatttt ggggagtagt atttcggtaa atcttccagt ttcatttttt
     1501 gacctgccct tcaagcatta tggggtaaat cttcaccccc agacgtccac cagatactgg
     1561 ctgagcacga acgatattga tttcatcaaa ctgctcatcg tccattagca accccgcatg
     1621 cgtcagcgca tccagcggcg ctttcagaat attgtccagg tcacggcggc gcttatccgg
     1681 tggttctgca ataattttta ttgccaacct tccggacagg cttaatttca gccgctgctg
     1741 gcgaacaata agcgccactg cccggcgata acgctccccg gcttttgata caaaatatgt
     1801 gctgccacga cgacgccagt aagtgttcac cgttggcggg taaggcaaaa caaattctat
     1861 gcgttcagtc atttatgctt tccacttcag aacacccgaa tttctcgcgt gcattaaaaa
     1921 acgaatcagc aacaacagct ggctgccgtg tttttcttca aaatctttta ccccggcgtg
     1981 tagttcgcta tggcatttac ggcacagcgg aataacaaac aaatcatcag cctttgttcc
     2041 catccctccc agtccatgac caatgatgtg atgcggatca tctgcctgat tgccacacgt
     2101 catgcatttc tgcgttttta cccaacgcgt gtatacaggc atctcttccc gttgtgattt
     2161 ctggcgctgg agatactgag ccggtgactc cggatcaacg gcaatgctga ccaccgtctt
     2221 ttcctgtggc gggttttgct ggtgggcgtg aggcagcggc gcaagatttt ttgtgcgctg
     2281 cttcagtatg ctggtggcgg tctgctctcc cggtacgatg tcgctttcac ggtacattga
     2341 gcggattttt tccgcacgca accccagcga acgacgtaat accgcttccg gtagcgcgtc
     2401 cgccacctga ttgcggaccg cccaccagga taattcagcc agcgataatt cccgttcctg
     2461 cgagccattc attgcatggc gtatgacgtc aatcatccat gcaaacaggt tttggtgagc
     2521 aagttgcccg agtgattcgg aggtctggtc gcgcagctgg ttgtcgcagt gccagcacaa
     2581 caccattgcg ccggtaccat aacggtgaat gacggtttca ctgtggtgat aatcgccgtg
     2641 tggccactgg caggatttaa catggcgcag taaccagtca gacaatgcgc cagcgccacc
     2701 agcagcacga atcactcgtt cgtcgctgaa aaatggcagt aatgatttat cctccgccag
     2761 cggctggcga acggcaggaa cgaccccgga cggcagatta cgcatgcttt tcggttccgg
     2821 ctccaccagt acccgggtat tgtggaatac cggcatggat tcacggcccg gcttaacgat
     2881 caccagcccg agttccggta ccagaacagg tcgaagtaat acccgcacgt tacctccaga
     2941 tgcgttgctg gaatgtgcgg gacggacgcg gtgggcgttc agagtaagga agcctgacgg
     3001 agattatcca gtgacgataa tcgaggctga gggctttctt aatctcgtat ccgcgtctgc
     3061 ggtagttatg aattagccat tcggcctgtt cttcagtaca tggtgggtgt tggtaccagt
     3121 cggttttaaa tgcgtgtgaa cgccgcccat gccggatggc aaggtcggta tcagaattgt
     3181 gaaatttggt tttgtgcgcc atctgttttc tctgctggcg cagcaggtgt caggtgttca
     3241 ggctgacgtg cgaattgtaa accagaatgc cagaaaaaaa caaaacccgc cgaaccgggt
     3301 taagtgcggg tgcgttgagg atgcctgaca catcagaggt ggcgagggat ttctcccccg
     3361 ccaggtctct tactcctcag gttcgtaagc tgtgaagaca gcgacctccg tctggccggt
     3421 tcggattcgt acctcgcaga ggtctttcct cgttaccagt gccgtcacta tgacggttaa
     3481 acagatgacg atcagggcga ttaacatcgc cttttgctgc ttcatagcct gcttcccctt
     3541 gcctttcggc acgtaagagg ctaacctaca tttgtgagac atagattggg cctcagatta
     3601 atgttaagcg tcttgcagga cgcgaaatgt taactggggc ttttctctat ctgcctttca
     3661 gtgttcatgc ctgagacaga tagcctcaag cacccgcagc cattctactt aactcacgtc
     3721 acctcgccaa tatgaaatca atcagaaagg tgatccataa aatcactcct tctcttcttt
     3781 tccgtagtgg agttggccaa ttttgataag agggcgtccc tgagatttgc ggtgtagatt
     3841 ggtatcgcgc agagaataca cacagccaca atattcctgc tgatagaatt tttcgcgctt
     3901 gctgatttca atcatacggg acgagccgcc ctgcttgcgc cagttataat cccagtacac
     3961 catacccgga taatgcgcaa cagctcgccg cccacactcg ttaacctgct gcatattttt
     4021 ccagcgtgaa atgcccagtg aactgctgat cacactgaaa ccattttcag cagcgtacaa
     4081 cgctgtccgc tcaaaacgca tgtcaaaaca catggtacaa cggatccccc tctcaggctc
     4141 ccattccatt cctttggcac gttcaaacca gttgtcggtg tcgtaatcag catcgataaa
     4201 cggcacgccg tgttgttcag caaagcgaat attttcatcc ttacgaatta aatactcttt
     4261 ctgaggatga atgttcgggt tgtagaaaaa gatggtgtag tcgattcccg aggcctgaag
     4321 cgcctccatc acttcaccgg aacatggagc acagcaagag tgcagtagta gtttgtttgc
     4381 cccgtttggg agctccaatt taggccgttt gaaatcagca atagtcataa atatttttat
     4441 tggggtcatg aaaatagcac agagtgtagc atcagagcag ggctatcggg aatatatgtc
     4501 taaatctggt aatatctggt tttgacgcaa agcggacaac cacgctggct ctaccctgcg
     4561 ccatgaaaat gtcaattcac atctgaacta atgctcttta atctagtaac gtctaaaata
     4621 cctaacattt ccttgataaa atgccagtac acgctgcata gcttcgctct tccggcactc
     4681 gcgacagatt atattcaggc gcctgtcgta gcggcgtatt tcgccgtctg gtaacgacca
     4741 gataaggtcc ggatcaacca ctgcaggttt cttcaccttt gcccttgaga gttttttgcg
     4801 agcattttgc cagtccttac gcgcctgttc agacgggaat aacccgtaac cagagttgta
     4861 tacatcgcca ctggcaacca gctctctggc gagaacactc atcagatatc ttgtcgcacc
     4921 tgtcttggct tccagttgcc gcaacgtctc gcgaccgctc agacgtacaa gttcaacaac
     4981 ctgcccttta attttttccc gctcttcttg tgtaaatact tttgccataa gcgcctccgg
     5041 caatcacttt tccgatacaa cacggcggga agaatcagta atctgtcgaa caatatcccg
     5101 gtgcttgttc agctcccgca gcgcggcgca gactcgctcc cacttctgaa catcactttt
     5161 cgccctgcgc agcgccaggt ttgccctgcg aagggacgga aaaatcagct catctgcttg
     5221 cgtttcggta aacgatggca acggctgcac aatgtccgcc acagtttctg ttttaatttc
     5281 ttcctgtgtt gcggcttccc ggactggtaa cgcagcacct gctggctgag gaaaggcctt
     5341 accatcactt tccgttacca gcgcggcttt cggctctgct ggtaaattat cgcccggcat
     5401 gcagtaacga aatttaccgt tctgattaac gcgtgccagc cgccccgttg cggttaccac
     5461 cgccagcgtg gaagcaacct tgcgagtact gacaccgaac ttacccgcca gttcctcaca
     5521 cgttttagcc ccatcctgac cgataaactc aatcatcatg tctgcggtaa ctttttgttc
     5581 gacctccccg gtcagcatat cctgtgcttc agattttact ggccgctctt cggttacccg
     5641 ggattcacct tcgccagcca gaaaccaggt gtgaccagtt ttatcaacga cgccttttct
     5701 tttgagttcc cacagctcgt tgacagcctc ttcacgactg attccaaggc gagctgccac
     5761 cacatgtgaa gaggcttttt tcagtgcttt cagtgcgtca gatacggttt ccattaaaat
     5821 ttcctccgga caaaattact tcacaaccct catattgctg acatttggac gccagctatc
     5881 ccagttaaac gtcacccatc gaccaccgtt catggtcatg cggtccataa tcctctcacc
     5941 aagaagcgta ctcattgcgg catgattcag gtttgttaac atcccgacac tgcacagtga
     6001 tgctgtccgg cgatcaatta tctggtgcaa taccacctgc tcgtttttcg tctcccgctg
     6061 aacgcctatt tcatccagga ccagcaaatc aaccccgcaa agctcctgta tttttccccg
     6121 gatttgccgt tgtcgtagct gtcatgcaac acgctcatga cgtcagacac ggtgacgata
     6181 atcacgctgc gccccttcac catcagccgg ttgcccatcg ccgctgcaag gtgatttttc
     6241 ccggtgccgg ttttaccgct gaacacaaaa ttcgtgcacc cggtcatcag ttcgtcagct
     6301 atggatttgg cctggctcag cgcgtatttt tgcccgtcgt tctgcacctg ataatttgca
     6361 aacgagcatt tgctgtgcag aggctggatg cccgaacgat tcaggatttt ttccacccgc
     6421 aactggcgat tctggcggtt aatctcctcg ctgcgttttc gtccttcagc aagttgccat
     6481 tcccgccact cctccaccgt ccggtacggt ggaaccgacc cctgtggtgc aagtctgcga
     6541 atacgttcaa gaaccccaac tgccgcaatg tttttcatga cacgtcaccc cctgaatccc
     6601 ggcggtattt cagtgtccgg ttcagaaatg tgattcacac aacgctgcgc aggcgaacgc
     6661 cccaggcgga taaccagttc atcccatttt tcccggagtt ttgccggact catgatgttt
     6721 tttacccaga acgaatcccg ctggagacgc ccaaacattt cacaaatttg tctgtgagtt
     6781 ctgccatcca gcatccgcat tgtgcgaacg tcattggccc atgctgtcca gttgggttct
     6841 ttcggtctag tgatctcgcc atcatagctg gccgcctgct cgtaaagact cacgattcgt
     6901 ccccagatcc actgtgcgca caccaaatct tcctgacttc cccactggcg ttttttcgca
     6961 ctgaacacaa ccgcgtcagg gtgtcgggtt aaaaaatcct gttcagccgt ctgcgggtcc
     7021 ggttgcgaag cgtccggaca agaagatctt ttatctgacg gatcaggttt taatactgac
     7081 ggatcggggt caatcatcgc ccccctaatc ggcagttttt tatcaacagt tgatccatca
     7141 aaatttgacg ggtcaaccgt tgaggggtca atatttgacg ggtcaactgt taacgggtca
     7201 ttttttgccg ggctaatttt tcttttcggt ttatatgact cacgcgccgc cgccgcagct
     7261 gcttcgagtt tttccacatt aagccgatag atattgctta cattacgccc accgacctta
     7321 cgctcttcct tcgtcagcca gccctctttc gccagttctg caatagccga tttcactgtg
     7381 gattcacttc ttgcaccgat ctgacgccgg atagtttcaa tggcaggcca tgacacgccc
     7441 tcgtcattgc tgtagtctgc aagacgggcc ataaccgcca ccctggataa gatcatgccg
     7501 gtgaaggcgc acccttccca gacaagacca tgaagcttgc tgctcataaa acccccgaac
     7561 accgtgcttt tagtgcatca ccacagcatt ccctgccggg ccgccgcgat tcatctggtc
     7621 atacaaaaca accgctgacg caacaaaatc atcgacatcc ttcaccagcc gatccctccg
     7681 ttcgacgatc tcacggtaat attcagaact gtggctgcgc atacgggcca ccagcaaagg
     7741 cggcatcgcc ttttcgatcg ccggtaacag agcctgcatt ttttcaacag catcaggggg
     7801 gtctttatcc agccaacgga aaattttctg ggtattacgg gccagggctt ccggatggct
     7861 gtcgtcgtac agttcaggga acgtcatccc cagttcgaaa taagtccggg ctatttcagc
     7921 tgcaggaact ttctcaccat cagggtatgc ccaggcattc atcgccatgc ggatgtgctc
     7981 atgtttgatt ttcatgaatc atttgcctct tgatgcttcg ggtatgatcg ttttcgtcat
     8041 ttggttgctt catcgacata ttctgcgaat aacatgacga gcgtcgtaag tatgtccaat
     8101 caacatcagg acgaagttct tcacacagga caccaccttt tgttgctcgt tcaatcgcag
     8161 gacatctctc agcaggtaac tgacgtacac ctttgatcca ttgatttacg cttggaggag
     8221 atacacctaa aagcctagcc attgctgatt gcccaccgac aacagcacaa gctcgtttga
     8281 atgaatagtt atcttttttc atcgaatgaa ctccaaaaaa cacgcaacaa tattaggctt
     8341 agcctaatga aattgtcaat aggctatgcc taatacatcg agagtaggga ttgcctaacg
     8401 cgatgcgcat aggagactat taagcaatgc ttagtggtaa agacttaggc cgagcgatag
     8461 agcaggccat taacaaaaaa attgcatcag gagccgtcaa atcaaaggcg gaaatcgcac
     8521 gtcatttcaa agtccaacca ccatcaatcc atgactggat taagaaaggt tcgataagta
     8581 aagacaaact tccagaacta tggcgtttct tttctgatgt ggttggtcca gagcattggg
     8641 ggcttaacga ataccccata ccaaccccat ccacttcaga tacaaaaagt gaacttttag
     8701 acataaacag cctttatcaa gccgcctctg atgaaaaaaa agcaattgtg gctttcatct
     8761 tatctggaaa tgctacggag cctagttggg ttgattatga cgttcgcgcc tacattgccg
     8821 caatggaaat gaaggtagct aactatctga aaaatcaaga atcaaaacgg aaaagccaga
     8881 acatcaccaa gacaggaact taaacttata tggtccgacg ggaaattcct agttcccgtt
     8941 agttaactcc tactacctct cccacaaacc atcacctatt aggttgcgcc caaattatta
     9001 ggcatagcct attgacaagt aattaggcat ttcctatagt tttcccatac caacccatcc
     9061 cgtcccacac aatacagggc aatacctcga gttaccaggc agtggtcagg ggttaagtag
     9121 ccagcccgag gcgtaagaac atgacggcag ggttcaactt taataactat gcagcaggtt
     9181 tttgttccgc taccccggcg ttaaggggaa atgaggtcag catggatact atcgagcttg
     9241 gcaacagcga atctctggta tgtggcgtgt tccccaacca ggacggtacg ttcaccgcga
     9301 tgacgtatac cagaagcaaa acgtttaaaa ctgaagctgg cgcgcgtcgc tggttaacca
     9361 gaaacactga ctgatgaggt tgacgatgga atttaaagat ttaccagtac cattccagga
     9421 aatggcatcg aatgtggttc gctctcaact ggcgactctt gacctgagta ccgtagaaaa
     9481 agaaaccatc gacaatatat ccggtaacgt acgccgagcc tttatcgggc tgtacgaaga
     9541 gaagcagctc tctgataacc aggatttaca tgaaaaatac ttcctggatc taatggacat
     9601 cattgataag gggtttggct tgttaatgaa aaagaaaggg attcgaatag aaccccttga
     9661 aaattacttt gcaacaaaaa gcattaattc ttttgattca aaataagaga attaattaca
     9721 gacttaacat gctctttctc atgattgaag ctctcatgat tgaaagtgcc gggttgaagc
     9781 gagtcgatat aatcaacaag actctgtcgt acgacttcat ttttatccat aacagatgca
     9841 agaaatgaaa ttgctaaaag agttatatca ctacgcgccg cagcatgttg caatgcttta
     9901 tcaaaattat taatctggcg tatcagggag ttaatgattt catcattttc agtcgacatt
     9961 tcaccctcct gagggttggt gattaaggag ttctccacgg gtgaggtgga gtgcgtgcgc
    10021 cggacacggg tgagcatccg gcactgacag tttactgaaa ggatatttcc ctgaaaagtc
    10081 agaccataac gcgaaagcgc ccggcgaggt agctggttca tagatagcct gtcgttaaat
    10141 tttcgtcgac cgtgcgtttc cggttgtggc aatccgcgaa atggcgcggc ggtaagtatg
    10201 gcggggttat tccttccccg ttgaggacac cgagttgtca ggttgaccat acgcttaagt
    10261 gacaaccccg ctgcaacgcc ctctgttatc aattttctgg tgacgtttgg cggtatcagt
    10321 tttactccgt gactgctctg ccgccctttt taaagtgaat tttgtgatgt ggtgaatgcg
    10381 gctgagcgca cgcggaacag ttaaaaccaa aaacagtgtt atgggtggat tctctgtatc
    10441 cggcgttaat tgttaactgg ttaacgtcac ctggaggcac caggcaccgc atcacaaaat
    10501 tcattgttga ggacgcgata atggaaacgt tattaccaaa cattaatacg tctgaaggtt
    10561 gttttgaaat tggtgtcact atcagtaacc ctgtatttac tgaagatgcc attaacaaga
    10621 gaaaacacga acgggagcta ttaaataaaa tatgcattct ttcaatgctg gcccgtttac
    10681 gtccgataca aaaaggatgc tggcaatgaa tacagcattt gcacttgttc tgacagtttt
    10741 tcttgtttcc ggagagccag ttgatattgc agtcagtgtt cacaggacaa tgcaggagtg
    10801 tgtgactgca gcaaccgaac agaaaattcc cggtaactgt tacccggtcg ataaagttat
    10861 tcaccaggat aataacgaaa tcccggcagg tctttaaaac agttccgtaa taaatatccg
    10921 gtttcattct tatatgccag caatggcagg gatttgttca cccttaaatc tgtaatgagg
    10981 taaaacaaaa tgagtaaagt ctttatttgc gccgccattc cggacgaaca ggcaataaag
    11041 gaagaaggtg ccgtcgctgt agccactgcc attgaagccg gtgatgaacg tcgcgcccgc
    11101 gcaaaatttc actggcaatt cctggaacat tatccggctg ctcaggactg cgcttataaa
    11161 tttcttgtct gcgaggataa acccggtata ccccgccctg ccctcgattc ctgggatgct
    11221 gaatatatgc aggaaaaccg ctgggatgag gagtctgctt cctttgtccc ggttgagact
    11281 gaatcagatc cgatgaacgt cacttttgac aagctggccc ctgaagtaca gaacgctgtc
    11341 atggttaagt tcgacacatg tgaaaacatc accgttgata tggttattag cgcacaggaa
    11401 ttgttgcagg aagacatggc aacattcgac ggacatatcg ttgaagcgtt gatgaaaatg
    11461 ccagaagtta acgccatgta tccggagctt aagctgcatg ccatcgggtg ggttaagcat
    11521 aaatgtaagc ctggtgccaa atggcccgaa attcaggcag agatgcgcat ctggaaaaaa
    11581 cgtcgcgaag gtgaacgcaa ggaaaccgga aaatacacgt ctgttgttga tctcgcccgc
    11641 gccagaacca atcaacagca cagtgaaaat tcaacaggaa aaatcagccc ggtcattgct
    11701 gccattcatc gcgaatacaa gcagacatgg aaaacactgg atgacgaact ggcctacgct
    11761 ctctggcctg gtgatgtgga tgccggaaac attgacggca gcatccatcg ctgggcaaaa
    11821 aatgaagtta tcgacaacga ccgcgaagac tggaagcgta tctcggcatc aatgcgcaaa
    11881 cagcctgatg cccttcgcta cgaccgccag actatttttg gccttgtccg tgaacgtccg
    11941 atcgacattc acaaagaccc tgtggcactg aacaaataca ttactgaata cctgactaca
    12001 aagggcgtgt ttgaagatga aggaagaaat cagagcgcaa ctgatactct ctcgtcgcca
    12061 gtaccagaaa ctgatgcagt ggaaacggca attccgggca acgaaaaaac cgaatgcaaa
    12121 gtggaagtcg aaccatctgt agagcgtgag gggccgttct acttcctctt caccgacaag
    12181 gatggcgaaa aatacggtcg cgcaaacaaa ctttctggtc tggaaaaagc actagccttg
    12241 ggagctacgg aaatcacaaa agaggaatac ttcgcacgta aaaacggcac gtactcaggt
    12301 tcacaacaaa atactggtgc atctgacacg accgcacaac cagagccggt aaaagttacc
    12361 gctgacgaag taaacaaaat tatgcaggca gccaatatca gccagcctga cgccgataag
    12421 ttgcttgctg cctctcgcgg agaatttgtt gcagggatta gcgacccgaa tgatccgaaa
    12481 tgggtaaagg ggattgaaac ccgcgattct gtaaaccaga accagcaaga atcggaacag
    12541 aacgaccaga aagcggaaca aaacagccca aatacgcaac aaaacgagcc agaaacgaaa
    12601 caacctgagc cagtagcgca acaggaaccg gaaaaagtct gcaccgcctg cggtcaaagc
    12661 ggtggcggca actgccctga ttgtggcgcg gtgatgggtg acgcaacata ccaggaaaca
    12721 ttcgatgaag agaatcaggt tgaagttcag gaaaatgatc cgaaggaaat ggaaggcgct
    12781 gaacatccac acaaggagaa tgctggtagc gctcaggatc acgccagcga tagtgaaact
    12841 ggcgagacgg cagatccctt aattgcgatg aacggtcatc acgttatcac atccaccagc
    12901 aggacgtgtg accatctaat gatcgacctt gaaaccatgg gaaaaaatcc tgatgccccg
    12961 attatctcaa taggtgcaat atttttcgat ccgcaaaccg gagatatggg accggaattt
    13021 agtaagacta tcgatctgga aactgctggc ggagtcattg atcgtgacgt cattaaaagg
    13081 tggctgaagc aatcacgtga agcgcagtct gccattatga ccgatgaaat cccgttagat
    13141 gatgcactgt tacaattgcg ggaatttatc gacgaaaact ccggtgaatt ttttgttcag
    13201 gtctggggaa atggagccaa cttcgacaac acgattttgc gccgttcata cgaacggcag
    13261 gggatcccct gcccgtggcg ttactacaac gatcgcgatg tacgcacaat cgttgagctg
    13321 gggaaagcca tagacttcga tgccagaacg gctattccat tcgaaggtga gcgccataat
    13381 gcacttgatg acgcccgtta ccaggcaaaa tacatttcag ttatctggca aaaactgatc
    13441 ccgaatcagg ctgattttta atgttcaacc ccggtcgttg cccaccagct atagtggcgg
    13501 cgaccatgat tagcgaacga cgctcatggc aagacttatt ctgctcactg agtgggcaaa
    13561 agaggaattc agtgaaccgg tccctactcc gagtacgtta agtaaatacg ctaaagccgg
    13621 aatgatattt cctctcccca aaaaagttgg aagacgctgg cgagtggatc cgcaagctcg
    13681 ctttgtcgga atggtaaaca agccggaggt gatcgccaca gatcaccctg ctttgaagag
    13741 gatactggaa gatggcgcgc ccgcgaaaat ataaaaccga tgttccggga ttatctccgt
    13801 attttgacaa aagaaataac aaagtttact ggcgttacag gcatcccata acaggcaaaa
    13861 atcacggtct cggcagtatt gaccagaaac tggcagaaac tattgcagca gaagcgaaca
    13921 gccgtcttgc ccggcagcaa atggaacaaa tgctcagtct gcaggagaaa attattagtg
    13981 ataccggcgg ttcatcaact gttaccattt ttctgaataa ttacagaaaa attcaacagg
    14041 aaagatatga aaacggcgag atcaaactca acacgctgaa acagaaagcg gcccctctca
    14101 gggtatttga tgaacgtttt ggcaccagac ggttagatgc cataaccgta aaagatgtgg
    14161 tatcagtact ggaagagtac aaggccagag gacataacag aatgggacaa attttcagga
    14221 aagtactgat cgatgttttc cgggaagctc agcaaacggg cgatgtcccg ccaggcttta
    14281 accctgcaga atcggcaaaa aaaccgcagg tgcggatatc aagacagcga ctgacttttg
    14341 atgagtggat gatgatttat aacgcagcgg aaaaggatgg ttacttttta cagcgcggta
    14401 tgctgctggc actgatgaca ggccagcgcc tttcagatat ttgcaaaatg caattttcgg
    14461 atatccggga tggttatctt catgtcgaac agcaaaaaac aggaacccgg attgccatcc
    14521 ctctggctct gcgttgcgat aaattaaatc tcaccctgga tgatgtggtg tcatcctgcc
    14581 gcgattgcgt tcttagtccg tggctattgc accaccatca cgcgaaaggg acagctaagc
    14641 gcggcgggat ggttaagcca gcaacattaa ccgttgcatt taaaaaagcc cgggattctg
    14701 tggattacaa ctggcgtgct aatggcaccc ctccctcttt ccatgagcag agatctttat
    14761 cagagcgatt gttcagagag cagggggttg ataccaaaat tttgctaggc cattcgaatc
    14821 aaaaaatgac cgatatttac aacgacgcac gcggtaagga atggaaaaaa ctggtcattt
    14881 gatgaccagt tttgcagagg ggttttgcag aggttttgca gagaaaatta aaaacgatat
    14941 cctgcggaga acataaacac ccacggatcc agtcgtaccg agtcttttac ggtagtaaca
    15001 ccagatttgt acttagccgt ggtatcgata tccatgtacc agactgacat gttaaccaac
    15061 cagtcacggt taatcagata atcaaccccc acctgcccgg cagctcccca ggaatctttc
    15121 agactgagat cggaaagccc tgcctctttg ccatgatcgt taaatccatt atcaaagaag
    15181 gtggtgtagt taatacctgc cccaacgtaa ggacggaatt tgctgctggc atcaccaaaa
    15241 taccactgcg ccatcagtgt tggcggcaga tggtgaacgg ttgcaatatc gccggtcgcc
    15301 cgggtgccga ttttatggcg gaacggcgtc gctgccagta attccacacc aatgttgtcg
    15361 gtcgccatat aagtaaacgt caagcccagt tgagtgttat tggtcacgct gaatccaccc
    15421 agacttccta acgtaccacc agcaccttct gttggacgta cggttgcaga acctgcacgc
    15481 ataaaaaatt cgcctgcttc atgcgcaaag gcactgccag agagaagagt tgttactgcc
    15541 aaagccgcca ctgttaactt tttcatatcc gctccgtcgt tatggttata aaaacgtgac
    15601 gaatatacct atattggagt aacaaatgat cctacataga tcacattaca tatgataatt
    15661 caccctttat tgatctggat taatttagaa gttgcattga gaatcctggt taacgtgatt
    15721 taaatcaatt tttaaatatt ttcgctacgc aaatattaac tcgatcgcca cttgccgcgg
    15781 tttgcccacg cctgaaggcc agcaattacc tccgctttac aaagatatgc ttttccatac
    15841 aagacctgat gctgccaccc gaggcttaac cagggtacaa ttgcccgcta attaacacct
    15901 gcataaaact caaggagagt gcatgtctat cacggcgcag tccgtatacc gtgacaccgg
    15961 aaatttcttc cgtaatcaat ttatgaccat tctgttggta tcgttgctat gtgcgtttat
    16021 cacagtggtg ttagggcatg ttttctcacc cagtgatgca cagcttgcgc agctcaatga
    16081 cggcgtgccc gttagcggca gtagtgggtt gttcgacctg gttcagaata tgtcaccgga
    16141 acagcaacaa attttgctgc aggcttcagc ggcgtccact ttttcaggat taatcggtaa
    16201 cgccattctc gccggaggcg taatattaat tatccagctg gtgtctgcgg gtcagagagt
    16261 cagtgcgctg cgagctattg gtgccagtgc accgatattg ccaaagttat ttattctgat
    16321 ttttctgact acccttttag tacagattgg catcatgcta gtggtcgttc cgggaattat
    16381 catggccatt ttactggccc tggcaccggt gatgctggta caggacaaaa tgggcatttt
    16441 tgcctcgatg cgtagcagta tgcggctgac ttgggcgaat atgcgtctgg tggcacccgc
    16501 agtactgagc tggttgctgg caaaaacact gttgctgctt tttgcctctt cttttgccgc
    16561 attaaccccg gaaattggtg ccgtactggc gaacaccttg agcaacctga tttcagccgt
    16621 attgctcatc tatctgttcc gtctgtatat gttgattcgc caataacctt aagcatttga
    16681 ttacggaatc gtaaaatgaa gcagtttctt gattttttac cgctggttgt ctttttcgcg
    16741 ttttacaaga tttatgacat ctatgcggct actgcggcgc tgatcgtcgc cacggcgatt
    16801 gtgcttatct atagctgggt tcgctttcgt aaggttgaga agatggccct gatcactttt
    16861 gttctggtgg tcgtcttcgg tggcttgacg ctgttcttcc acaatgatga gtttattaaa
    16921 tggaaggtta cagtcattta tgctctgttt gcgggagccc tgttagtcag ccaatgggtg
    16981 atgaaaaagc cgctaattca gcggatgctg ggtaaagaac tcacgctgcc gcaaccggta
    17041 tggtcgaagc tgaatctggc ctgggctgtt ttctttatcc tttgcggtct ggcaaacatc
    17101 tacatcgcat tctggctgcc gcaaaatatt tgggtcaact ttaaagtctt tggactgacc
    17161 gcccttacct taatcttcac attgttaagc ggtatctata tctaccgcca catgccgcag
    17221 gaagataaat cctaaccaga ctgccagtcc ttcggggctg gcgctgtatc tcctctgttc
    17281 tcctcaggaa aatcatagta gcatcgcgcc tgtgattttc cttttaagtc ggttttacca
    17341 tgtctacaac acataacgtc cctcagggcg atcttgtttt acgtacttta gccatgcccg
    17401 ccgataccaa tgccaatggt gacatctttg gtggttggtt aatgtcacaa atggatattg
    17461 gcggcgctat tctggcgaaa gaaattgccc acggtcgcgt agtgaccgtg cgggttgaag
    17521 gaatgacttt cttacggccg gttgcggtcg gcgatgtggt gtgctgctat gcacgctgtg
    17581 tccagaaagg gacgacatcg gtcagcatta atattgaagt gtgggtgaaa aaagtagcgt
    17641 ctgaaccaat cgggcaacgc tataaagcga cagaagcatt atttaagtat gtcgcggttg
    17701 atcctgaagg aaaacctcgc gccttacctg ttgagtaata gtcaaaagcc tccggtcgga
    17761 ggcttttgac tttctgctta ctgaatttcg gtggtgccgt taattttaaa caggatattc
    17821 accacaatcc cactgcctgg cttacccggc tcataacgcc atctgcgcat cgcatttttc
    17881 acctcacgct caaacatgtt cgcaggcttg gctgagagga tttgtacgtt atccacgcga
    17941 ccatccggcg tgacgtcaaa tttaacttta acctgccctt caatgcgcaa tgcctgtgct
    18001 cgtgccggat actgcggctg attacggctt aatgcgcgtg gtcctgaagc cacactggta
    18061 accggcttgc tggttgcagc cgttgctgta cttgatgtca ggcgtgccag tgccgtattt
    18121 tcaaacggtg atgccggacg cgactctacg ggtttgacat cgcgttttgg ctgctcctgt
    18181 acctttttca ccggcttcgg ttttggctta ggtttcggct tcggcttttc aatgaccacc
    18241 ggtgcttctt ttggcggttc ggggatcggc tcaggttccg gttctggctc taccaccggc
    18301 tccggtggcg gctgaacggc ttgtggcggt tcgagatcag caggcgcaac catcgtgaca
    18361 gaaattggct gcgcaggcgc aggtagttca ataacctgat gtaccgaggt atagagcaga
    18421 cccgccacaa cagcaccatg aatgcagacc gaaagtaacg tcggccaggg gaagcggcga
    18481 ggtaaatcaa gggtcattga agtcataatc atttcagtag aaaaaccaag cctcgatttt
    18541 aaatgcaaat agcaatcata ttcaataagg caagacgatc aggatcagtg aaaatgtcat
    18601 ttttgccgta attaacctta ctttatgcat ggtcttaaca aagacatcat ctttccgttg
    18661 cagatcttcg ccctttcaaa taacgtactt tacaactttc ccgaacaagg agttgtgccc
    18721 gtgttgtatg ttatttacgc tcaagacaaa gctgatagcc tcgaaaaacg cctttccgtt
    18781 cgtccggcac atttagcacg tttacagtta ctgcatgatg aaggtcgttt gttgacagct
    18841 ggtccaatgc cagcggtaga cagtaacgat ccaggggctg cgggatttac tggctcaacc
    18901 gttattgctg aatttgaatc gctggaagca gctcaggcct gggccgatgc tgacccgtac
    18961 gtagcggcag gagtctatga acacgtttca gtgaaaccat ttaagaaagt gttctgaata
    19021 gagattcaat atttaagggc acggtttttg caaccgtgtt cttgtttggc ctttccttat
    19081 agccggtcag tgcattcacc accacaagca gataataact ttatctgtat ttctttatat
    19141 gatgtgagca tattcaggaa aaatgacctt tcctgaggta cagttgctcg ctcaaaacct
    19201 ttgattactg cggataaagt catctactat tgtttaacac attcacgcgc tgcatgtatg
    19261 ttcagaaaat gtgcacgcta agataattaa acaaaattgt ggttacagag gtatcagtga
    19321 gtcactgggc tacattcaaa caaacagcaa caaatttatg ggtgacccta cggcacgaca
    19381 ttctcgcgct ggccgtcttt ttaaatggat tgcttatttt taaaacaatc tatggtatgt
    19441 cggtcaattt gctagatatt ttccatatca aagcattttc agagttggat ctttccttgc
    19501 tggcaaacgc cccactattt atgctcggcg tctttcttgt cctgaactcc attggcttac
    19561 tgttccgggc aaagctcgca tgggcaatca gtatcatttt gttgttgata gcgctaattt
    19621 ataccctgca tttttatccc tggttgaaat ttagtattgg attttgcatt tttacgctgg
    19681 tgtttttgct gatactgcgc aaagacttct cccacagtag cgccgcagcc gggacaattt
    19741 ttgcatttat tagtttcacg acattactgt tttactcaac ctacggtgcg ctttatttaa
    19801 gcgaaggttt taatccgcga atagaaagtt tgatgaccgc gttctatttt tcgatagaaa
    19861 ccatgtcaac cgtcggctat ggcgatattg tccctgtttc tgaatcagca cgattgttca
    19921 ctatttcggt cattatttcc ggtattaccg tttttgccac atctatgacc tcaatttttg
    19981 gtccgcttat ccgcggggga ttcaacaaac ttgtaaaagg aaacaatcat acaatgcatc
    20041 gtaaagatca ttttattgtt tgcggacatt cgattctcgc catcaatacg attctgcaac
    20101 tgaatcaacg cggacaaaac gtaacggtta tcagcaactt gcctgaagat gatatcaagc
    20161 aacttgagca acgcttaggc gataacgctg atgttatccc cggtgacagt aatgacagtt
    20221 cagtattaaa gaaagcggga atcgatcgtt gcctggccat tctggcgctg agtgataacg
    20281 atgcagataa cgcgtttgtt gtactctcgg caaaagatat gagcagtgat gtcaaaacag
    20341 ttctcgccgt cagtgatagc aaaaacctga ataagattaa gatggtacat ccggatatca
    20401 ttctctcacc gcaactgttt ggcagcgaaa ttctggcgcg agttttaaat ggtgaagaga
    20461 ttaataatga tatgctcgtt tcaatgttgt tgaactccgg tcatggcatt ttcagcgata
    20521 acgatgaaca agaaacgaaa gctgacagta aagaatcggc gcaaaaatag agtttaaaga
    20581 tggaggagta aacttattgg gcaccgcaat ggtgcccagt acatttagat attgtagatc
    20641 gcaaacaata acgagttacg ctgtttgttt agaatgcact tcctgatgct gtggatacgc
    20701 atatttcggc gcgattgccc ctcaagccaa cgcgatttac gtcggctagc ctgacgctgc
    20761 atgcgccagc gccccacttc cgttctactc cgcttcatgt taactactct atgcaataac
    20821 agaatggtca ttataccccc gcccccgacg ctgaccagtg cttttcccgc gtttttattt
    20881 gccagatgaa tccatatgcg taaactcata acaatgcgct ttcaaaagga tttctaatct
    20941 atgacaaccg tttatacgtt ggtgagttgg ttggccattc tgggatactg gttgctcatt
    21001 gcaggcgtaa ctttacgcat tctaatgaaa cgacgcgcag ttccctccgc gatggcctgg
    21061 ctgttgatta tttacattct gccgttagtc ggaattattg cctatcttgc cgttggcgag
    21121 ctccatttag gcaaacgccg cgctgagcgc gccagagcga tgtggccttc caccgcaaaa
    21181 tggcttaacg accttaaagc ctgtaagcat atcttcgccg aagaaaatag cagtgtcgct
    21241 gcgccattat tcaagctttg cgagcgtcgt caggggatcg ctggggtcaa agggaatcag
    21301 ctacaactga tgaccgagtc agatgatgtg atgcaggcgt taatccgcga catccagctc
    21361 gcgcgccata atattgagat tgtgttttat atctggcagc ccggcggcat ggcggaccag
    21421 gtggctgaat cattaatggc cgctgcgcga cgcggcattc attgccgatt gatgctcgac
    21481 tccgccggga gtgtggcttt tttccgcagc ccgtggcccg agctaatgcg taatgccggt
    21541 attgaagtgg tcgaagcctt aaaggtcaat ctgatgcgtg tgtttttacg ccgtatggac
    21601 ctgcgccaac atcgcaagat gatcatgatc gataattaca tcgcgtacac cggcagcatg
    21661 aatatggtcg atcctcgcta cttcaaacaa gatgcgggcg tagggcaatg gattgatctg
    21721 atggcgcgta tggaaggccc catcgccacc gcgatgggga ttatttattc ctgcgactgg
    21781 gagattgaaa ccggaaaacg tattctgccg ccaccaccag atgtcaatat tatgccgttt
    21841 gaacaggcca gcggtcacac cattcacaca attgcttctg gccccggctt tccggaagat
    21901 ctcattcacc aggcattatt gactgcggct tattcggcgc gtgaatattt gatcatgacc
    21961 acgccctact ttgtgccaag cgatgattta cttcatgcga tttgcacggc ggcacagcgc
    22021 ggggtggatg tcagtattat ccttccgcga aaaaatgact cgatgctggt cggctgggcc
    22081 agtcgcgcat tctttacgga acttcttgct gctggggtta aaatttatca gtttgaaggc
    22141 gggttactgc ataccaagag cgtgctggtc gatggcgaac taagtctggt tggcaccgtt
    22201 aaccttgata tgcgtagtct gtggctgaat ttcgagatta ccctggcaat cgacgataaa
    22261 ggttttggtg cagaccttgc cgccgttcag gacgattata tttcgcgttc acgtctgctc
    22321 gatgcccgtt tatggctaaa acgtccatta tggcaacgtg tcgccgagcg actgttttac
    22381 ttcttcagcc cgttgctgta aaacgtctcc aacagaggtt aaacaggtag tgactatgga
    22441 tatggatcta aacaatcgcc tgactgaaga tgaaacgctt gagcaggcct acgatatttt
    22501 tctcgaactg gctgccgaca atctcgaccc agctgatgtt ctgctgttca atcttcagtt
    22561 tgaagagcgc ggcggcgcgg agttattcga tccggtggaa gactggcagg aacatgttga
    22621 tttcgatttg aacccggact tttttgccga agtggtgatt ggtctggcgg acagtgagga
    22681 tggtgaaatc aacgatgttt tcgcccgcat tctgttatgc cgcgaaaaag atcacaaact
    22741 ttgccatatc atctggcggg aataaataat cgctttcggc gtgaaaaagg gctgacaact
    22801 gtcagccctt attgtgttta aagcggatcg actttcaggc aagaaacggc gtgtctgaaa
    22861 ctcccttcca gcacaggacg tgttttggcg cactccggac cggcaatcgg gcaacgggta
    22921 cggaaaacac aaccggaagg cgggttgatc ggcgacggta attccccttc cagtaactgg
    22981 atggttttgt tcttctccag atccggatca ggtatgggga ctgccgacat caatgccctg
    23041 gtgtaaggat gtagtggatt gtggtagacc tcatcatagg tccccagttc taccgcatgg
    23101 ccgagataca tcaccaacac acgatcggaa atgtgtttta ccacggccag gtcatgagca
    23161 ataaaaatta atgacaatcc catctcacgt tgcagctgct ggagcaggtt gaccacctgc
    23221 gcctgaattg acacgtccag cgccgacacc ggctcatcac agataatcag cttcggttca
    23281 agaataagag cacgagcaat cccgatacgc tggcactgcc caccagagaa ctcatgcgga
    23341 tagcggttaa tcaggttagg caataacccg actttcagca tcatcgcctt cacgcgctcg
    23401 cgaacttcct gacgtgacat tttcggatga taagtacgca gtggttcagc gatgatctcg
    23461 ccgatggtca tgcgcgggtt tagcgatgcc aacggatcct ggaaaatcat ctgaatatca
    23521 ctgcgaacgg cacgccattc atcgggctta atgcccagca actctttacc taaccaggca
    23581 acatgaccgt cggtcgcttt aaccaggcca atgatggcgc gagcaaaggt ggacttaccg
    23641 catcccgatt cccctaccac acctaatgtt tccccttcat acaggcgaag cgtgacacca
    23701 tcgacggctt tgagcgtttt cggcggttgc cagaaccact gtttgccatc tttgatttca
    23761 aagtgcactt tcagatcggc gatttcaagg aggacttttc ttccttcggt tacagcattc
    23821 ataacagttc ctccaccggt ttaaagcaag cacacagacg gccaagcgta aactcttcca
    23881 gcggcggtgc gctactacaa atttccatcg catgcggaca acgtggctgg aacgggcaac
    23941 ctttcggtaa tcgcagcagg tttggcggat tacccgggat ggtcaacatt gtttcacctt
    24001 ccgcatcgag acgcggcacc gcgttgagca aaccgataga ataaggatga acgggttgat
    24061 aaaagacatc gcgcgcgttg ccatattcca tcgtgcgccc ggcgtacatt accagcactt
    24121 tgtcacagat ccccgccacc acgccaagat cgtgggtaat cataatgatg gcggtattaa
    24181 attcccgttt cagttcattt aatagcgtca tgatctgcgc ctgtacggtg acgtccagcg
    24241 ctgtagtggg ttcatccgca atcagcagct taggtcgaca tagcaatgcc atcgcaatca
    24301 taactcgctg acgcatgccg ccagaaaact cgtgcgggta cattttcatg cgtttacgtg
    24361 cttccggcat ttttaccgca tcgagcatcc gcaccgactc ttcaaacgcc tcagctttgc
    24421 tcatgttctt atgcagcatc agcacttcca tcaactgctc accgacgcgc atatagggat
    24481 tcaacgaagt cattgggtcc tgaaaaatca ttgagatttg ttcagcgcgc agtttattga
    24541 gttcatgctc tggcaaattg aggatttcac gcccattgaa ggttgccgat ccgccaatac
    24601 gtccgttggc agccaacagg cccatcaacg caaatgcagt ttgcgattta cccgaaccag
    24661 actcacctac aatacccagc gtttctccgg cacgtaggga aaaattcaaa tcattgaccg
    24721 tcgtgacgtc gccgtccggg gtactaaagg tgacacgcaa atctttcacg ttcagcagtg
    24781 cgtcagcctg ttgttgtgcg agcggcacag ttgcagtttc aattacgctc atggctgcac
    24841 tccttaacga tctttcgggt cgagggcatc acgcaagcca tcgccgataa agttgaaaca
    24901 aaacagcgtc accacgagga atcccgctgg gaacaacaat aaccatggag agacttccat
    24961 cgagttcgcg ccatcactca gcaatgcacc ccagctgctt aacggctctt gcgtacccaa
    25021 ccccaggaag ctaaggaaag attcaaagag gatcatgctg ggcaccagaa gtgatgcgta
    25081 gaccaccacc acaccgagta cattcggcac aatgtggcga ataacaatgc ccgatgtcga
    25141 tacaccgcca acttgtgccg cctcaataaa ctctttgcgc ttcagactca gggtttgccc
    25201 acgcacaata cgagccatat ccagccagga aaccatgcct atcgccacga aaatcagcag
    25261 gatgttttga ccgaaaaagg tcaccagcaa aatgacgaag aacatgaatg ggaaggagtt
    25321 gaggatttcc agcagacgca tcattaccga atccacttta ccgcccagat aaccggaaag
    25381 cgaaccataa agtgtcccga cgaccacagc caccagtgcc gcagcaacac cgaccatgag
    25441 tgagatacgc ccaccaatcg caacgcgcac aagcaggtcg cgaccggatg agtcagtacc
    25501 aaagtagtga ccggactcca tatccggggc gctggacatc atcgcccagt cagtatcgtc
    25561 ataggcaaac tgggaaagca tcggtgccag gattacaaat aacgcgatca gcaccagcac
    25621 catcagactg gcaaccgccg cacggttatg aataaaacgt cgacgtgcgt cctgccacaa
    25681 gctgcgccct tcgacctcca gcttttcact gaaattttcc agcgtctcgc tgtttttctt
    25741 acttaacatc atcgcgagct ccagtatcag taacggattt tcgggtcgat aaccgcatat
    25801 agcacatcga caatggcatt aaacaaaatg gttaaagcac caaccaggat ggtcaggctt
    25861 aacactaagg aatagtcacg gttcaatgcg ccattaacga acagttgtcc aatccccggc
    25921 aaaccataaa tggtttcgat aaccatagaa ccggtaataa tgccgacaaa tgcggggccc
    25981 atataagaga gcacgggtaa cagagcaggt tttaatgcgt gacgtaaaat gatccgccgc
    26041 ataggtaacc ctttcgcccg ggcagtacga ataaaattgg agtgtaatac ttcaatcata
    26101 gagccacggg taatacgcgc aatactggcg atataagcga gtgacaacgc caccatcggc
    26161 aatatcatga atttaagcgc cccaccattc cagccaccgc ccggcagcca atgcaaaatg
    26221 atcgcaaata tcatgactaa taatggtgca accacaaaac tggggataac aaccccggtc
    26281 attgccagcc ccatcacggt atagtcccat ttggtgtttt gttttaatgc ggcaataacg
    26341 ccagcactaa cacccagtat taccgcaagg aaaaatgctg cggctcccag tttggcagaa
    26401 acgggaaaac tggatgcaac caagtcattg accgaataat ctttatattt aaacgatgga
    26461 ccgaaatcac cgtgcgccag ttgtttcagg tagctgaaat actgtgtcat gatcggatca
    26521 ttaagatgat atttcgcttc gatattggcc atcacttctg gcggtaaagt acgttcgccg
    26581 gtaaaagggc ttcccggcgc gaggcgcatc ataaagaacg aaatagtaat aagaataaat
    26641 agcgtcggaa tcgcttccag acagcgacgt agaataaatt ttaacattgc cctaccttct
    26701 ggcctgtgcc ttctgtaatg cgataaaaat cagacaccgt ggagcaggac actcctgccc
    26761 cacgtattgc cattagtgct tcacaatgta catattccgg gtataggtat tatccagcgg
    26821 atctttgccg gtatagccac caacccacgg tttcaccaga cgcgcattca cgtagtaata
    26881 aacaggaaca atggccgaat ccttatccag ctgttgttct gctttagtgt acagagctgt
    26941 gcgctgcgcc tcgtcagtca ctttcagcgt ttccgccata atgctgtcaa aggccgggct
    27001 cttataatgc gcggtattca tcgagctgtt cgaaagcatg gtgttcagga aggaagttgg
    27061 ttcgttgtag tcagcacacc agcctgcacg ggccacatca aaagtaccct ggtgacgggt
    27121 gtcgaggaac gttttccact cctggttaac cagtttgacg tttacaccaa tgtttttctt
    27181 ccacaatgaa gaggcagcaa tcgccagctt tttatgcaga tcggaggtgt tatacaacag
    27241 gttgattgtc aacggtttgt ctgcggtata acccgcttca gccagcagtt ttttcgcttc
    27301 ttcgttacgt ttttcctggc tccagccaaa ccattccggc tgagtcaatt ttgcgccatc
    27361 agtatacggt ggagtgtaac cataggcggg catgtcgccc tgcgctttca ctttattaac
    27421 aatgatatcg cggtccatac ctagtttcag tgcggtacgc acacgcacat cgttgaatgg
    27481 cggtttctgg ttgttaattt cgtaatagta agtgcacagg tatggatcaa cgtgaacttc
    27541 gtccgggatc tcttttttca gcttctggaa caattcgatc ggcatgttgt tataagtcat
    27601 gtcgatttca ccactacggt agcggttgac atcggtaact tcagaagcaa taggcaaata
    27661 ggttacctgg ttaataacgg ttttcgcgtt gttccagtag gtcgggctgc gttcaagaac
    27721 gattcgttcg tttacgaccc aatcttttaa ggtataggca ccgttggtga cgatattacc
    27781 aggctgggtc catttttcgc cgaatttctc gatagcggct tttggcaccg gtgaagttga
    27841 tgggtgaaca agtaatttat agaagtacgg aacgggttca cttaaggtga cttctaatgt
    27901 gtgatcatca atagctttca caccgagatc ggtaatcggt tttttccctt caagaatttc
    27961 atcaataccg gcgatatgcc catattgcag ataactggca tacggagaag cagtgttcgg
    28021 atcaacagaa cgttgccagc tatacacaaa gtcttgtgct gtgactggcg taccatcaga
    28081 ccatttcgca tctttacgca aatggaaggt ccagactttc gcgtctttat tatcccagga
    28141 ttcagcgacg ccaggtgccg gatgaccgtc aagatcgctg accagtaagc cttcaaacag
    28201 gtctcggctg atattagact ccggaacacc ttcaattttg tgcggatcta atgactgaac
    28261 ttctgaacca ttgttacgta ccagcgtttg tttttccgcc agtgtgacgc ctgcgggtac
    28321 atcagctgcc agcgcgacat tccctgccat tagcgcagcc agaacgccag ctgctactaa
    28381 acttctcttg gtgatgttgg tcattgtttt ttggactccc tcattataat tactggtatt
    28441 aaccagcatg tgtaatcccg gattgggacc ctgcacaggc tcggagactt tctgctgtca
    28501 ggttacttta tcgttacgga ttgctatcac cgactttatt tattctggtg attcagacga
    28561 tcaccttatg tcgattcgta ctgtgtctcc cctgtcgaga cacattattc tttcgcgacg
    28621 ctctttaatt gttaattgtt aattattctc attaccaata aagaatcgtc tggcggttgc
    28681 ccggaaagta ctaaatgcgg ttcttactcg ccaatacatt ttgcaaaatt gttaagcaat
    28741 tctcttttat tgaccgtatc agaatctata gcttgcatcc atgccttaac aaacatcttt
    28801 caattcaatc aaatagagat tggctaagca tgtctatctt ttctgattac agtttcagta
    28861 ttgaaatgca caataattta acaattgatt attatttagc actttcctct accaaaggca
    28921 gtggaattac taatatcatt tcaattattc ttcagcaagc ccaggattat gatgtggcga
    28981 aaataacatg atggtgagga gaagcagtta agaaaatcct tataactaac tgtaatttga
    29041 gaagaatatt tttacctatt ccttttgctt ttgataact
//
LOCUS       DADMIB010000035        28656 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.035, whole genome shotgun sequence.
ACCESSION   DADMIB010000035 DADMIB010000000
VERSION     DADMIB010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 28656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28656
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.035"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..925
                     /locus_tag="JNZ89_001486"
     CDS             <1..925
                     /locus_tag="JNZ89_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110-like element ISEc11 family transposase"
                     /protein_id="HAY8935403.1"
                     /translation="RRQDFLTFFGNREPCLIGMEACGGSQHWARELTKLGHKVRLLQA
                     RFVKAFVMGNKNDVMDARAIWMAVQQPGKEIAVKTEEQQSVLVLHRTRMQLVKFRTAQ
                     INALHGTLLEFGETIHKGRAAMEREFPEALERMKERLPPYLIMVLENQYNRLNELDSL
                     IEDIEKQLTSVARQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSGREFAAYVGLV
                     PKQTGSGGKVRLLGISKRGDTYLRTLFIHGARAVALVAKEPGPWITELKKRRPASVAI
                     VAMANKLARTVWAITAHDRKYDRNHVSIRPY"
     gene            1636..4821
                     /gene="rne"
                     /locus_tag="JNZ89_001487"
     CDS             1636..4821
                     /gene="rne"
                     /locus_tag="JNZ89_001487"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HAY8935404.1"
                     /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
                     KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
                     QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
                     PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF
                     RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
                     SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
                     RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
                     SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
                     LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE
                     AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPA
                     QPGLLSRFFGALKALFSGSEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD
                     TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTTDEQQAPRRERSRR
                     RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV
                     VAPVVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS
                     RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV
                     EEQREQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEMAEVVEAPVPVAEPQPEVVETTH
                     PEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEVAETAEVVVAEPE
                     VVAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVPEAPHHSDWQR
                     PTFAFEGKGAAGGHTATHHASAAPARPQPVE"
     gene            complement(5018..5971)
                     /gene="flgL"
                     /locus_tag="JNZ89_001488"
     CDS             complement(5018..5971)
                     /gene="flgL"
                     /locus_tag="JNZ89_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-filament junction protein FlgL"
                     /protein_id="HAY8935405.1"
                     /translation="MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPI
                     AASQAVVLSQAQAQNSQYTLARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTL
                     SDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI
                     KQQVDASRSMVIGHTGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADS
                     EADKEIAAAALDKTNRGLKNSLNNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMS
                     DLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK"
     gene            complement(5983..7626)
                     /gene="flgK"
                     /locus_tag="JNZ89_001489"
     CDS             complement(5983..7626)
                     /gene="flgK"
                     /locus_tag="JNZ89_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HAY8935406.1"
                     /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA
                     NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS
                     TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI
                     AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS
                     VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLN
                     TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPA
                     VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV
                     AFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEKDAGDSDNRNGQ
                     ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQGNVVTQLSNQQQSIS
                     GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR"
     gene            complement(7692..8633)
                     /gene="flgJ"
                     /locus_tag="JNZ89_001490"
                     /pseudo
     CDS             complement(7692..8633)
                     /gene="flgJ"
                     /locus_tag="JNZ89_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415599.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
     gene            complement(8633..9730)
                     /locus_tag="JNZ89_001491"
     CDS             complement(8633..9730)
                     /locus_tag="JNZ89_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415598.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HAY8935407.1"
                     /translation="MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVG
                     LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQT
                     IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVSGAGASAGGSSVQVNQL
                     NGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDA
                     RTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA
                     QGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSARLNNVVRA
                     LNALGATPMDLMSILQSMQSAGCLRAKLEII"
     gene            complement(9742..10440)
                     /gene="flgH"
                     /locus_tag="JNZ89_001492"
     CDS             complement(9742..10440)
                     /gene="flgH"
                     /locus_tag="JNZ89_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HAY8935408.1"
                     /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT
                     PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT
                     NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
                     LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVVDARIEYVGNGYINEAQN
                     MGWLQRFFLNLSPM"
     gene            complement(10493..11275)
                     /gene="flgG"
                     /locus_tag="JNZ89_001493"
     CDS             complement(10493..11275)
                     /gene="flgG"
                     /locus_tag="JNZ89_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HAY8935409.1"
                     /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL
                     LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF
                     FQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT
                     QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY
                     VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMQQKLTQL"
     gene            complement(11413..12168)
                     /locus_tag="JNZ89_001494"
     CDS             complement(11413..12168)
                     /locus_tag="JNZ89_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgF"
                     /protein_id="HAY8935410.1"
                     /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV
                     PVEGLSLPTRTLVTASTPGADMTPGKIDYTSRPLDVALQQDGWLAVQTADGSEGYTRN
                     GSIQVDPTGQLTIQGHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR
                     LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMS
                     DMIASARRFEMQMKVISSVDDNAGRANQLLSMS"
     gene            complement(12188..14116)
                     /gene="flgD"
                     /locus_tag="JNZ89_001495"
                     /pseudo
     CDS             complement(12188..14116)
                     /gene="flgD"
                     /locus_tag="JNZ89_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706995.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
     gene            complement(14128..14532)
                     /gene="flgC"
                     /locus_tag="JNZ89_001496"
     CDS             complement(14128..14532)
                     /gene="flgC"
                     /locus_tag="JNZ89_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HAY8935411.1"
                     /translation="MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRA
                     KQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEM
                     VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ"
     gene            complement(14536..14865)
                     /gene="flgB"
                     /locus_tag="JNZ89_001497"
     CDS             complement(14536..14865)
                     /gene="flgB"
                     /locus_tag="JNZ89_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HAY8935412.1"
                     /translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDID
                     FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYQMSLSALSGQIKGMM
                     NVLQSGN"
     gene            15021..15680
                     /gene="flgA"
                     /locus_tag="JNZ89_001498"
     CDS             15021..15680
                     /gene="flgA"
                     /locus_tag="JNZ89_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HAY8935413.1"
                     /translation="MLAIKRSVAIIAILFSPLSAASNLTSQLHTFFSAQLVGVSDEVR
                     VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM
                     PIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTHFRQAW
                     RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARMRMVSGLVVSGVVDADGNILIN
                     L"
     gene            15756..16091
                     /gene="flgM"
                     /locus_tag="JNZ89_001499"
     CDS             15756..16091
                     /gene="flgM"
                     /locus_tag="JNZ89_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-28 factor FlgM"
                     /protein_id="HAY8935414.1"
                     /translation="MSIDRTSPLNPVSTVQPRETTDAPVTNTRAAKTTDSTSTSTSTS
                     TSTSTSTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDIGKIADALIN
                     EAQQDLQSN"
     gene            16096..16512
                     /gene="flgN"
                     /locus_tag="JNZ89_001500"
     CDS             16096..16512
                     /gene="flgN"
                     /locus_tag="JNZ89_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FlgN"
                     /protein_id="HAY8935415.1"
                     /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE
                     QKSSLLATLDYLEQLRKKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE
                     RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI"
     gene            complement(16552..18087)
                     /gene="murJ"
                     /locus_tag="JNZ89_001501"
     CDS             complement(16552..18087)
                     /gene="murJ"
                     /locus_tag="JNZ89_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706990.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HAY8935416.1"
                     /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
                     FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG
                     MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP
                     AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPR
                     INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS
                     GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV
                     SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
                     LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV
                     AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR
                     RTV"
     gene            complement(18254..19120)
                     /locus_tag="JNZ89_001502"
     CDS             complement(18254..19120)
                     /locus_tag="JNZ89_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HAY8935417.1"
                     /translation="MKKLRIGVVGLGGIAQKAWLPVLAAAPDWMLQGAWSPTRAKALP
                     ICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD
                     AERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT
                     LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG
                     SQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIEC
                     VQNQTVPQTAGE"
     gene            complement(19122..19769)
                     /locus_tag="JNZ89_001503"
     CDS             complement(19122..19769)
                     /locus_tag="JNZ89_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF480 domain-containing protein"
                     /protein_id="HAY8935418.1"
                     /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
                     EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
                     ITTLLLRGAQTPGELRSRAARMYEFSDMAELESTLEQLANREDGPFVVRLAREPGKRE
                     SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD"
     gene            complement(19780..20364)
                     /gene="rimJ"
                     /locus_tag="JNZ89_001504"
     CDS             complement(19780..20364)
                     /gene="rimJ"
                     /locus_tag="JNZ89_001504"
                     /EC_number="2.3.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S5-alanine
                     N-acetyltransferase"
                     /protein_id="HAY8935419.1"
                     /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP
                     WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF
                     HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG
                     FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR"
     gene            20600..21808
                     /gene="mdtH"
                     /locus_tag="JNZ89_001505"
     CDS             20600..21808
                     /gene="mdtH"
                     /locus_tag="JNZ89_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtH"
                     /protein_id="HAY8935420.1"
                     /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
                     AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
                     WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
                     YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA
                     GYYMLAVQVMLMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHR
                     LMAGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSY
                     MGFSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKR
                     AARRLLERDA"
     gene            21872..22519
                     /gene="grxB"
                     /locus_tag="JNZ89_001506"
     CDS             21872..22519
                     /gene="grxB"
                     /locus_tag="JNZ89_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 2"
                     /protein_id="HAY8935421.1"
                     /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG
                     QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL
                     PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK
                     PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI"
     gene            22653..23213
                     /locus_tag="JNZ89_001507"
     CDS             22653..23213
                     /locus_tag="JNZ89_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8935422.1"
                     /translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK
                     DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP
                     VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
                     QGEAMAKKLAKGIEVKPGEIVIPFTD"
     gene            23319..24365
                     /gene="pyrC"
                     /locus_tag="JNZ89_001508"
     CDS             23319..24365
                     /gene="pyrC"
                     /locus_tag="JNZ89_001508"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HAY8935423.1"
                     /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVVPYTSEIYGRAIVMP
                     NLAPPVTTVEAAVAYRQRILDAVPAGHNFTPLMTCYLTDSLDPNELERGFNEGVFTAA
                     KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREAHFIES
                     VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP
                     HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL
                     GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV
                     PFLAGETVRWSVKQ"
     gene            24439..24684
                     /gene="dinI"
                     /locus_tag="JNZ89_001509"
     CDS             24439..24684
                     /gene="dinI"
                     /locus_tag="JNZ89_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein I"
                     /protein_id="HAY8935424.1"
                     /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY
                     AAANNLSVIGVTKEDKQRISEILQETWESADDWFVSE"
     gene            24974..25228
                     /gene="bssS"
                     /locus_tag="JNZ89_001510"
     CDS             24974..25228
                     /gene="bssS"
                     /locus_tag="JNZ89_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssS"
                     /protein_id="HAY8935425.1"
                     /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT
                     EVGQTLWLTTDVARQFISILEAGIAKIESGDFPVNEYRRH"
     gene            25343..26461
                     /gene="solA"
                     /locus_tag="JNZ89_001511"
     CDS             25343..26461
                     /gene="solA"
                     /locus_tag="JNZ89_001511"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HAY8935426.1"
                     /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH
                     GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLAN
                     VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK
                     EAGCAQLFNCPVTAIRHDDDGVTIETVDGEYQAKKAIVCTGTWVKDLLPELPVQPVRK
                     VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV
                     PFAEVVSDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG
                     LSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ"
     gene            26509..26622
                     /locus_tag="JNZ89_001512"
     CDS             26509..26622
                     /locus_tag="JNZ89_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2770 domain-containing protein"
                     /protein_id="HAY8935427.1"
                     /translation="MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF"
     gene            26883..27449
                     /locus_tag="JNZ89_001513"
     CDS             26883..27449
                     /locus_tag="JNZ89_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HAY8935428.1"
                     /translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFTLGLWMVTLSYYDGW
                     YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLF
                     AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
                     FMALKHHFIDKDDTLKRMLGKSSSDYGV"
     gene            27453..28028
                     /locus_tag="JNZ89_001514"
     CDS             27453..28028
                     /locus_tag="JNZ89_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HAY8935429.1"
                     /translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG
                     YSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKY
                     PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGNDPWGGKRAGFEAEGK
                     IKLKDFNIKTDLGPASQEVDLIISVEGVQQK"
     gene            complement(28070..>28656)
                     /locus_tag="JNZ89_001515"
     CDS             complement(28070..>28656)
                     /locus_tag="JNZ89_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HAY8935430.1"
                     /translation="NHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYC
                     TGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGER
                     ISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPE
                     EQRRRRAGRENGNKIFNKSRGRLNTTLGIPDPTE"
BASE COUNT         6926 a         7582 c         7256 g         6892 t
ORIGIN      
        1 gcgtagacag gattttctga cgttcttcgg caaccgtgag ccatgcctga ttggtatgga
       61 ggcctgtgga ggttctcagc actgggcacg ggaactgaca aaacttggtc ataaagtccg
      121 gttgttgcag gcccgcttcg ttaaggcatt cgtcatgggc aataagaatg atgtgatgga
      181 tgcccgggct atctggatgg cggttcagca gccgggtaaa gaaatcgccg taaaaacaga
      241 agaacagcag tcggtactgg ttctgcaccg tacccgcatg caactggtga agttccggac
      301 cgcacaaatt aatgccctgc acgggacgtt actggagttt ggtgaaacca tccacaaagg
      361 ccgggcagcg atggagcggg agttccccga agcactggaa cggatgaaag agagactgcc
      421 accgtatctc attatggttc tggaaaacca gtacaaccga ctgaatgagc tggactcact
      481 gatagaggat attgaaaaac agcttaccag cgtggcgagg cagaatgaaa cctgtaagcg
      541 gttgctggat attcctggcg ttggaccact tattgcgacg gcagcggtgg ccaccatggg
      601 ggaagcatca gcgtttaaat cggggcgaga gttcgccgca tatgttggtc tggttccaaa
      661 acaaactggc tccggaggga aagtacgtct gctggggata agcaaacgtg gtgacactta
      721 tctcaggaca ttatttatcc acggtgcaag agcggtggca ttagtagcta aagagcctgg
      781 cccgtggata accgaactga aaaaacgtcg tccagccagt gtggcaatcg tcgccatggc
      841 aaacaagctg gcacgaacag tatgggcgat aaccgcccat gaccgtaagt atgacaggaa
      901 ccacgtcagt atcagaccat attaatcgct gataccatta aacaatgaac tcttaacaaa
      961 agggtgaatg ctgaaaggtt gctatggcgg ccagagtgat gacaaagaca ggtaagaccg
     1021 tgactcacta aacctgaaca gtattttggg cttgaagtcc gccgtgaaaa taaggggtga
     1081 gtcggcgaat tacatagggg ctcgcagcgt tacggctgca ataaagccgg atataaagct
     1141 gcaacctacc cgtcatgtca aaacaatgga tgccttgcaa acgggatgcg ttcatataaa
     1201 aactgtgagt aagcgggtga taaatggtaa aagtcatctt gctataacaa ggcttgcagt
     1261 ggaataatga agccgtttcc gtgtccatcc ttgttaaaac aagaaatttt acggaataac
     1321 ccattttgcc cgaccgatca tccacgcagc aatggcgtaa gacgtattga tctttcaggc
     1381 agttagcggg ctgcgggttg cagtccttac cggtagatgg aaatatttct ggagagtaat
     1441 acccagtctg tttctttgat aattgcgctg tttttccgca tgaaaaacgg gcaaccgaca
     1501 ctctgcgcct ctttgagctg acgataaccg tgaggttggc gacgcgacta gacacgaggc
     1561 catcggttca cacccggaaa ggcgttactt tgcccgcagc ttagtcgtca atgtaagaat
     1621 aatgagtaag ttacgatgaa aagaatgtta atcaacgcaa ctcagcagga agagttgcgc
     1681 gttgcccttg tagatgggca gcgtctgtat gacctggata tcgaaagtcc agggcacgag
     1741 cagaaaaagg caaacatcta caaaggtaaa atcacccgca ttgaaccgag tctggaagct
     1801 gcttttgttg attacggcgc tgaacgtcac ggtttcctcc cactaaaaga aattgcccgc
     1861 gaatatttcc ctgctaacta cagtgctcat ggtcgtccca acattaaaga tgtgttgcgt
     1921 gaaggtcagg aagtcattgt tcagatcgat aaagaagagc gcggcaacaa aggcgcggca
     1981 ttaaccacct ttatcagtct ggcgggtagc tatctggttc tgatgccgaa caacccgcgc
     2041 gcgggtggca tttctcgccg tatcgaaggc gacgaccgta ccgaattaaa agaagcactg
     2101 gcaagccttg aactgccgga aggcatgggg cttatcgtgc gcaccgctgg cgtcggcaaa
     2161 tctgctgagg cgctgcaatg ggatttaagc ttccgtctga aacactggga agccatcaaa
     2221 aaagccgctg aaagccgccc ggccccgttc ctgattcatc aggagagcaa cgtaatcgtt
     2281 cgcgctttcc gcgattactt acgccaggac atcggcgaaa tccttatcga taacccgaaa
     2341 gtgctcgaac tggcacgtca gcatatcgct gcattaggtc gcccggattt cagcagcaaa
     2401 atcaaactgt acaccggcga gatcccgctg ttcagccact accagatcga gtcgcagatc
     2461 gagtccgcct tccagcgtga agtccgtctg ccgtccggtg gttcgattgt tatcgacagt
     2521 accgaagcgt taactgccat cgacatcaac tccgcacgcg cgacccgcgg cggcgatatc
     2581 gaagaaaccg cgtttaacac caacctcgaa gctgccgatg agattgctcg tcagctgcgc
     2641 ctgcgtgacc tcggcggcct gattgttatc gacttcatcg acatgacgcc tgtacgccac
     2701 cagcgtgcgg tagaaaaccg tctgcgtgaa gcggtgcgtc aggaccgtgc gcgtattcaa
     2761 atcagccata tttctcgctt tggcctgctg gaaatgtccc gtcagcgcct gagcccatca
     2821 ctgggtgaat ccagtcatca cgtttgtccg cgttgttctg gtactggcac cgtgcgtgac
     2881 aacgaatcgc tgtcgctctc tattctgcgt ctgatcgaag aagaagcgct gaaagagaac
     2941 acccaggaag ttcacgccat tgttcctgta ccaatcgctt cttacctgct gaatgaaaaa
     3001 cgttctgcgg taaatgccat tgaaactcgt caggacggtg tgcgctgcgt gattgtgcca
     3061 aacgatcaga tggaaacccc gcactaccac gtgctgcgcg tgcgtaaagg ggaagaaacc
     3121 ccaaccttaa gctacatgct gccgaagctg catgaagaag cgatggcgct gccgtctgaa
     3181 gaagagttcg ctgaacgtaa gcgtccggaa caacctgcgc tggcaacctt tgccatgccg
     3241 gatgtgccgc cagcgccaac gccagctgaa cctgccgcgc ctgttgtagc tccagcaccg
     3301 aaagctgcac cggcaacacc agcagctcct gcacaacctg ggctgttgag ccgcttcttc
     3361 ggcgcactga aagcgctgtt cagcggtagt gaagaaacca aaccgaccga gcaaccagca
     3421 ccgaaagcag aagcgaaacc ggaacgtcaa caggatcgtc gcaagcctcg tcagaacaac
     3481 cgccgtgacc gtaatgagcg ccgcgacacc cgtagtgaac gtactgaagg cagcgataat
     3541 cgcgaagaaa accgtcgtaa tcgtcgccag gcacagcagc agactgccga gacgcgtgag
     3601 agccgtcagc aagctgaggt aacggaaaaa gcacgtacca ccgacgagca gcaagcgccg
     3661 cgtcgtgaac gtagccgccg ccgtaacgat gataaacgtc aggcgcaaca agaagcgaag
     3721 gcgctgaatg ttgaagagca atctgttcag gaaaccgaac aggaagaacg tgtacgtccg
     3781 gttcagccgc gtcgtaaaca gcgtcagctc aatcagaaag tgcgttacga gcaaagcgta
     3841 gccgaagaag cggtagtcgc accggtggtt gaagaaactg ccgctgccga accaattgtt
     3901 caggaagctc cagctccacg cacagaactg gtgaaagtcc cgctgccagt cgtagcgcaa
     3961 actgcaccag aacagcaaga agagaacaat gctgataacc gtgacaacgg tggcatgccg
     4021 cgtcgttctc gccgctcgcc tcgtcacctg cgcgtgagtg gtcagcgtcg tcgtcgctat
     4081 cgtgacgagc gttatccaac ccagtcgcca atgccgttga ccgtagcgtg cgcgtctccg
     4141 gaactggcct ctggcaaagt ctggatccgc tatccaattg tacgtccgca agatgtacaa
     4201 gttgaagagc agcgcgaaca ggaagaagta caagtgcagc cgatggtgac tgaggtccct
     4261 gtcgccgccg ctgtcgaacc ggttgttagc gcgccagttg ttgaagaaat ggctgaagtc
     4321 gtagaagccc ccgtaccggt tgccgaaccg caaccggaag tggttgaaac gacgcatcct
     4381 gaagtgattg ccgccgcggt aactgaacag ccgcaggtga ttaccgagtc tgatgttgcc
     4441 gtagcccagg aagttgcaga acacgcagaa ccggtggttg aaccgcagga agagacggca
     4501 gatattgaag aagttgccga aactgctgag gttgtggttg cagaacctga agttgttgct
     4561 caacctgccg cgccagtcgt cgctgaagtc gcagcagaag ttgaaacggt agccgcggtt
     4621 gaaccagaga tcaccgttga gcataaccac gctaccgcgc caatgacgcg cgctccggca
     4681 ccggaatatg ttccggaggc accgcatcac agtgactggc agcgccctac ttttgccttc
     4741 gaaggtaaag gtgccgcagg tggtcatacg gcaacgcatc atgcctctgc cgctcctgcg
     4801 cgtccgcaac ctgttgagta ataattagct caaagtaatc aagccctggt aactgccagg
     4861 gcttttttat ttcatgtttg aatcaacata ttaaaattca tcaaatggca tccttgctaa
     4921 ccaacaatgc aaaataggca aaaaaaatgc ccgccccggc gatccctgag cgggcagaca
     4981 aaacataccc agtttcatga tatgttttaa agcgagctta tttgttgagc tggaagagcg
     5041 acaatccctg catatcggta aatgctttat acgatgcctg caatgccgtt tgctgcatga
     5101 tgtaagatga aatagttgca ttccagtcca catcaaccag atcgctcatc tgctgcgttt
     5161 gccctaaagc gcgatcgcta cctaaggaat ccagcgactc cagttcgttc agctgcgtgc
     5221 ctaattccgc gcgaacggca aggacattat tcagcgagtt tttcagtcca cggttggttt
     5281 tatccaatgc cgcagcggcg atttctttat ccgcttcgct atccgcgacc ggcgttttca
     5341 gggctgcgat ggcgctatcc agcatggcaa aaagattggt ttcagaagcg ctaccgtctg
     5401 gctccgcaac tgcgttgctg gtaatactgt cgaaaatttt gtcacccgtg tgccctatca
     5461 ccatcgaacg cgaagcatcg acctgttgct taatactttc tgctccaccg acgtatttcc
     5521 ctttctcttc gctaaacggc gcagtctctg ttttataacc ggcaaaaatg tagcgcccgt
     5581 taccgtcagt ggtgttcgcc agattcagca actggtcacg aagcccctga atatccgtag
     5641 ccagcgaggc ccggtcatcg tcactcaagg tgccattgct ggcgtagaca attttttcct
     5701 gagcattctg gatagcagtg gtgacctggc taagtacact ctcttccagt gacacttttt
     5761 gaatggcgaa agtacgcgcc agcgtgtact ggctgttttg cgcctgtgcc tgggagagaa
     5821 ctacggcttg tgatgctgca atgggatcgt cagaagggtt aacgactcgc ttacctgtcg
     5881 acatctgctc gccgtacttc atccattccg cctgagaatt ggtgatgcca cgcatgtttt
     5941 gctggtacat catctgggta ctgaaacgca tcttatctcc ccttagcgaa tgttaatcag
     6001 cgcatcaaaa atcgcgtttg ccgtctgcag aacctgcgca ttcgccaggt aatactgctg
     6061 aaaacgttgc agatttccgt actcttcgtc gagattgacg ccagagatag actgctgctg
     6121 attggaaagc tgcgtcacca cattaccttg cgtggcgcta ctggttttca acgtcgcggt
     6181 tttattaccg atatcactca ctaacgaggc ataagcgtcg ttaaaggatt tcgcaccgcc
     6241 caccgtttta ctgttgcttt gcagatccag cagggcctga ccgttgcggt tatcgctatc
     6301 acccgcatct ttttcgctcg ccatcgctat tttcgcttcg tcggtgatta atacatccat
     6361 gttgacgatg gcgtcactta ctggtttcag cgtgaagctg tcgttaacgg caggcgttcc
     6421 tgtaaacgtc aactccagac catcaaatgc cactttaccg ttggcatccg gcgtcaccgt
     6481 aaaagtggta ttgctggcaa ggcgggtgac ctgccactga ttattatcga acgagatttt
     6541 gtaatctgtc gccagtaccg cggaggcatc agttaccgtg gcaccgatcg caacgtcacc
     6601 tttgtttttc gtgttttgca aaaccgcggg cttaccgata gcaaagaaat cttcaccagc
     6661 atcgccgttg gcatcaaatc cggctttgtg ttgggtgttg aaagcctcgg caaatgccag
     6721 cgccagttgt ccaagcgtat tacgcgtctg gtccagatcc tgagaacgga atgtcagaat
     6781 gccgcccagc gacccggtat tcagtaattt ctccgggatc tcaatattgc ctgccgtccc
     6841 atcaacgtaa gcgacagtcg tacgagaagg gtcggcgctg gaaggaactg ccgccagttg
     6901 ccgcgccgta cttccctgaa ccagtgagta accattggcc atcgtgatgt tataagtgcc
     6961 gccatcctga acgctgactt ctacaccaac aatctggttt aattcgctca ccagttgatc
     7021 gcgttgatcc agcagattgt taggtgacgc ccctgccccc acgcctgtca ggcgggagat
     7081 ttggtcgttc aggctggcga tttgtttagc gtaattgttg atctgatcaa cgctggcacc
     7141 tatcgcgata ttgacctgtt tgtcctggtc acgaagatac tgatcggtgg ttttaaactg
     7201 attcaccaac ccttctgatt tcccaatcag cgcctggcgc gctgccgggt cttccgcgtt
     7261 actcaccagc gtttgcaggc tggtgaagaa atcctgcatc tgtgttgcca gcgaagaggt
     7321 actggtggag agcatattgt cgattttcga catctgctca tagcgggcag tcaggccgct
     7381 actttgcgtc tgcgccgcac gtaactggtt ggtgataaac gcatcatact cacgctgcac
     7441 accagaaacg tagacaccat tgccaaccca gccgccagcg cccaacgtgc tattggcctg
     7501 cgccataata gtggtttggc gggtatatcc ggcaacgtta tagctggaga tattattact
     7561 tgccgtattt aacgccgcct gggccgcgtt cagtccgctc atggcgttat taatcaagct
     7621 ggacatggag gttccttata agccttcaat tacagagtat tatcggcagc gacccgccgg
     7681 acttgagtta ttcaaaacag attatcaatg ttcatactgt aggttttgct caccttgtcg
     7741 cttatcgatt tcatctgctg aatcatgttg gtgagtttgc gggcatagtg aggatcggtg
     7801 gcatagcccg cgtcctgtag ggcctgcgcc ccctgctccg cactcgtggc ggtggtcacg
     7861 gcggcgtagc gcgggttacg cgttaacagc ccaacgtaat ccgactatgc ttccagatac
     7921 gagctgtaga cccgaaactt cgcttttact ttcttcgctt cgccgttttc atattcagtc
     7981 gtggtgattt cagtaactgg ccctttccag ttgccagagg ctttgacacc aaacaggtta
     8041 tagctcggct cgccgttttc gcggcggatt tgccgttgcc cccaaccaga ttccagcgcc
     8101 gcctgagcga ggatcaaatg atgtggcaca ccgctttgct ggcttgccag ttgggcgggc
     8161 agcgagagtt gcgcgaggaa tgctttactg tcacccggca gcgaatcatc gtagttacgt
     8221 ggcacggcct tttgcaccag ctgcgaaagc gcctgatttt gataacgcac cacagtttcg
     8281 agcgggaatt tcatcggtgc tgctggcgtg gactcctctg gcaatggttg ttctggcgtc
     8341 atctgtttaa ccatcatctc tgcaagcccc agacctttgc ccgccgtcat ctgttgggca
     8401 atctgctggt catacatact ggtatacagg cgagtgtgct cgctgctgaa caggccatct
     8461 tttggtaaag cgtcgcgcat gcttttcaac atcatctgca cgaacatccc ttccacctga
     8521 cgggccaccg gacggatatt tgccgccgga tcttcgcccg ctttcgcctt tagttcgttg
     8581 agtgattgcg catcccaggc cgcacttgcc agtagtttgc tatcgctgat catcagatga
     8641 tttccagttt tgcccgcaga catcccgcac tttgcattga ttgcagtatg gacatcagat
     8701 ccatcggcgt agcgcccagc gcattgagcg cgcgcaccac gttattgagc ctggcgctgg
     8761 aacgtacgct ttgcagcgaa ccgccgctct ggcgtaaatc gatctgcgtt tgtggagtaa
     8821 ccacagtctg tccaccacca aacggtgtat ctggctggct gacattggcc tgacgattaa
     8881 ctgttactga gagattcccc tgcgctaccg cgcagctgtc gagggtcact tcgcgattca
     8941 tcaccaccga accggtgcgc gagttaatca ctactttagc gtcctgcggg gtgacattaa
     9001 cctgcatatt ctggatatcg gcaaggaagc ggacctggga actgttgcca ctcggtacgc
     9061 gcacctgaat agtccgcgca tctaacgcgg tggcgctgcc atatccacgc acgcggttga
     9121 tggtgtcagc gatttgctgc gccatgctga aatcttcgtc gttaagttgc aaattaaggg
     9181 tattcccgac gccaaactgg ctgggcaatt cacgttcaat aaccgcacca ttggtgatcc
     9241 gtccaccgtt cagttggtta acctgaacac tgctaccgcc agcggaggct cctgcgccgc
     9301 taaccagaat attgccctgc gccagcgcat acacctgact gtcaacgccc ttaagcggtg
     9361 tcatcaacaa cgtacctcca cgcaagcttt tggcattacc catggaagaa accaccacat
     9421 cgatggtttg cccctgacgt ccaaacggag gaagtgacgc tgtcaccatt accgcagcga
     9481 cgttttttag ctgcatattg gtgcccgtcg gaacggtaat tcccagctgt gagagcatgt
     9541 tattaagcgt ttgtgtggta aacggcgtct gggttgtctg gtcaccggtg ccatccagcc
     9601 ccaccaccag accatagcca atcagtgagt tttgccttac cccctgaaca ctggtgagat
     9661 cgcgaatacg ctcagcctga gccgccgtcg tgaccagtag aagaattaat gcagagagaa
     9721 atttaatcac cacagcctca cttacattgg cgacaggtta aggaagaaac gctgcaacca
     9781 gcccatattt tgcgcttcgt taatgtagcc attgcctacg tattcaatgc gcgcatccac
     9841 cacctgagta gacggtacgg tattgctgcc gctgatagtg cgtggattaa ccacgccaga
     9901 gaagcgaata aattcggtac cctgattaat ggcaatctgt ttttcaccca ccacatgcag
     9961 gttgccgttg accagtacct ggtcaaccgt caccgtcaac gtgccgctaa aggtattgct
    10021 ggcattggcc ccgccctttc cgttgaacgt gttaccaccg gaggcttcga catcggcacg
    10081 agcgttacca aacagcccct gcaaatagcg cggcacagta tcaaagccaa aattagtttt
    10141 accgtcacgg ctggcattcg cagaggagct tttgctggcg ctgacgttct cctgcaacac
    10201 gatggtcagc gtatcgccaa tattgcgtgg tcgacgatct tcaaacagcg gttgatagcc
    10261 atagttaatc ggctgagcag actggaaaat agaaccgttg gcgacgggcg tcggaccggg
    10321 aaccggttgt gcactggtcg ccccctgcac cagcggcgtg gagggtatcc aggcgcagcc
    10381 ggttagtgaa agcaccaaca agctggaaat ggcataagta tgcgcagcgt ttttttgcat
    10441 ggctatcatc ttcaaaaatc agtaaaccgg tgaacctgcc accggttaag ccttagagtt
    10501 gcgtcagttt ttgctgcatc tgatcggtgg tggacaccgc tttactgttg atttcgtaag
    10561 cgcgttgcac ctgaatcata ttgaccagtt cttccgccac gttgacgtta gacgtttcaa
    10621 catacccttg atacagcaat cccgcgccgt tcaggcccgg cgtgctttcg ttcggtgcac
    10681 cagaggattg cgtttcggtg tagaggtttt cgccaatgct ctccagcccg gtgtcattca
    10741 taaaggtggt gagattgagc tgcccaacct gaaccggagc tgcctggcct tgttgggtta
    10801 cgctgaccac gccatcacga ccgatggtga tacttaacgc attcgccgga atggtgatcg
    10861 ctggctgcac ctgaaaacca ccagccgtca ccagctgccc gttctgatcc acctggaaag
    10921 agccgtcacg ggtataggct gatgaaccat ctggcaacat cacctggaaa aagccctgcc
    10981 ctttaatcgc gacatctttg ctgttgttgg tctgcgacag atttccctgg ctgtgtaagc
    11041 gttcagtggc gaccgggcgt acccccgtgc cgatttgtaa tccggagggt aaggtggttt
    11101 gttcggaaga ctgtgccccc ggctggcgaa tggtttgata aagcagatct tcaaacaccg
    11161 cgcgctgacg cttaaaaccg ttagtactga cgtttgccag gttgttggca atgacgtcca
    11221 tattggtttg ctgggcgtca aggcccgttt tggcgatcca taatgaactg atcataaaat
    11281 gtcctgtagt ggattagtga caagcagagc agaagcacgc gacagtgtga attccccctc
    11341 actctaaccc tctccccaaa ggggcgaggg aatagtccgc gcgcttttat tgcaatgtca
    11401 tcaatcgttc aattaactca tcgacagcag ttggttggca cggcctgcgt tatcatcgac
    11461 gctgctgatc accttcatct gcatttcaaa acgccgcgcg ctggcaatca tgtcgctcat
    11521 tgccgcaacg gcattgacgt tactgccttc cagaaccccc gacatcacac gcaaggttgg
    11581 atctgcctgc agtaccggcc ctcgcgtggc ctgggtttct gcgcttaaac gaaaaatgcc
    11641 gtcgtcaccg cgctgcactt cgctgcccgt ggctttcacc agtttcagac gccctactgg
    11701 cgcaactgta tttgccggat cgcccggatt gagcgccgag attgtgccat cggcagcaat
    11761 agtgatttcc gctccttccg gcacagcaat tggccccgcc tcgcctatca cctgatgccc
    11821 ctgaattgtc agttgcccgg tgggatcaac ctgaatgctg ccattacgcg tatacccttc
    11881 gctgccgtca gcggtctgca cggccagcca gccatcctgc tgcaacgcaa cgtccagcgg
    11941 gcgcgaggtg taatctatct tgccgggcgt catgtctgca cccggtgttg acgccgttac
    12001 cagcgtgcgc gtgggcagtg aaagcccttc caccggcact gcgcgcaagg cgtttaactg
    12061 cgcgcgaaaa ccgggcgtag aggcattggc cagattactg gcggttaccg cctgttgatt
    12121 cagcgtctgg ctggctgctc ccatcgcagt ataaattgcg tgatccattg agctatcccg
    12181 tcagcgatta gcgtaagtta accagcgtgt tgaggatctg gtcctgggtt ttgatggtct
    12241 gggcgttaga ctgatagtta cgctgggcaa cgatcatatt gaccagttct ttactgagat
    12301 cgacgttgga cgcttccagc gcaccgttgg tcagggtgcc aaagtttccc gtcccggctg
    12361 tccccaacag cgccacgcca gaagattgcg tcgcagacca gacgttgtcg ccttcggatg
    12421 ccagaccttc gttgttggca aagttcgcca gtacaatctg ccccagcagt tgagtttgtt
    12481 cgttggaata gttgccgaca accgtaccgt catcattgat ttgataactc accagatcgc
    12541 ccggtttgta gccgttctgg ggggttgcca caatattgtt agcgccggta ttttgctgca
    12601 tggagttgag gaagttcaga ctaaacgtgg cgggttctgc accgttaatt gcgccggttg
    12661 cgatattatt cgccatcgca ccatccacta atgtgccatt agcattaaat tccagtgttg
    12721 tcgctgtctt cgcaatgctg tttggatcac tgctatcctg ggtgtagacc tgccagttat
    12781 tatccccggt cttcacaaag tagacgctca tgtcatgagc attaccctga ctgtcgaaaa
    12841 cagtcaccga accttttttg ttatagctat ccgcattgct ggcgctgaat ggcgtaacag
    12901 taggaagcgg atcactggaa ttcaggttga tctgcatcga cgccgtggtg gtagttttcg
    12961 ctgccatcag ggtattcggg atcgaaatat tggtcggatt cgccccttgc tgaatagtcg
    13021 gcggcgtacc ggttgccggg taacccgtca gctgtaaacc ttgcatattc accaggttac
    13081 ggttttcatc cagcttaaat tgtccgttac ggctgtagaa caccgaaccg ttgctgtcta
    13141 ccagacggaa aaaaccgttc tggctgatag caacgtccag acctcgcccg gtgttggtgg
    13201 tcgtgccatc tgtaaagtcc tgagtgatac cggcaacttt tacccccagt cccactttcg
    13261 aaccggcaaa catatcggca aaagaggccg tgcctgattt aaagccgtag gtggcggagt
    13321 tggcaatatt gttgccaata acatcgaggt tagtggcggc agcgtttaat ccgctaaccg
    13381 cttgagaaaa ggccatgact gactcctgaa atgtgaaggc ttaaattatc tgccgtactt
    13441 cgtcgagggt ggtggtgccg taagtgccga gatccagcgt attaccgctg ttgccgcgga
    13501 tcacaccctg caccagagca aactgcagcg gctgggcaac cagttgtgta ccaccgttac
    13561 tggcggtaat cgctacattg taagaaccgt tcggcgcagt gctgccatca gtcaacgtac
    13621 cgtcccaggt gaaactgtga actccggcgg tcagttcacc aatatcaatg gtgcgcacaa
    13681 ccgcgccatt tttatcggtg atggtggccg taactttgtc tgccgcctgt tgcagctcaa
    13741 caccaaacgg cgtggtcgtg gtcacagccc cttcttcact gccggttccc gcaagaacag
    13801 ttgtgccggg gatcatcacg ccgtgaccga tcaggttact ggcctgtaac gactggctgt
    13861 tatcaatctg tccggaaata gatccgagca tggtattgag tttttcaatc ccgctgaccg
    13921 tgctgatttg tgccaattgc gacgtcagct cgttgttttc cattggattg gtcgggtcct
    13981 ggtttttcag ctgcgccacc agcaaagtca gaaaactgct ttgtaaatct gcggcgttgc
    14041 tgcccgtgag cgaactactg ctggtggtac tgacgccggt atttgtcgga tcggtggtgg
    14101 ttaccgcaat ggacatagct ttctccttta ttgaccgagc gtaagggttt tcagcatcat
    14161 gcttttcacc gtgttgagca cttcaacatt ggcctgatag ctgcgtgacg ccgacatggt
    14221 gttaaccatc tctccgacaa catcaacgtt cggcattttt acgtagccct ttgcatccgc
    14281 cagcggatta cccggttcat aaaccagttt gtccggggcc tgactttcta taacatcggc
    14341 aacctttacg ccgcctgtcg cagcacctgg tgcagcgtta acctggaata ccacctgttt
    14401 tgcccgatat ggctgtccat cgggaccggt cacgctatca gcattcgcca gattactggc
    14461 cgccacgttc aggcgctggg actgggcagt taacgccgac ccggcgatat caaaaatatt
    14521 cagcagtgcc atccgttaat ttccgctctg taaaacgttc atcatgcctt tgatttgccc
    14581 gctcaacgca ctaaggctca tctggtattg cagttctgcg gtaggaggcg tcagcgcctg
    14641 cgccggaatg tgttgcgttg aggtcatcgt cagagcaacc acactggttg catcccgtcc
    14701 acgttgcatg acttttttaa gttcactggc aaaatcgata tcgcgcgcct gataaccaag
    14761 ggtatcggca ttggcgatgt ttgctgccag cacttcctga cgctgggcgc gcagattgag
    14821 cgcctcttgt tgaaaacgta aggcggcgtc gagcttatcg agcatatctc ctccgcaggt
    14881 atcaaaattc tgccatcagc ttaaatgcct ttacgcgcgc gttatcggcg gaataaacgc
    14941 aaaatgggtc gctatttatg ccgttgatga ccattgggga cgggtacaat tcacgttgta
    15001 gaaatagctg gggggcgaaa atgctggcaa taaaacgtag cgtggcgatc atcgcgatac
    15061 tgttcagtcc gttaagtgcg gcgagcaatc tcacatcgca attgcacacc ttttttagcg
    15121 cccagctcgt gggggtaagt gatgaggttc gtgtttctat tcgtacagca cccaatctac
    15181 taccgccgtg cgagcagcca ttgctttcga tgagcaataa ttcccgcctg tggggcaatg
    15241 tgaatgtgtt ggcacgctgc ggtaacgaca aacgatattt acaggttaat gtgcaggcca
    15301 caggaaatta tgtggttgcc gcgatgccca ttgtgcgggg aggaaagctg gaagctggca
    15361 atgtcaaact aaaacgcgga cgactggata ccctgccacc gcgtacggtg ctggatatca
    15421 atcaacttgt tgatgccatt agcctacgcg atctatcacc cgatcaacca atccaattaa
    15481 cccattttcg ccaggcatgg cgggtaaaag cgggacaacg cgtcaacgtg atcgccagcg
    15541 gtgacgggtt tagcgccaac gcagaaggtc aggcgctgaa caatgcagcc gtcgcacaga
    15601 atgcgcggat gcgcatggta tcgggactgg tggtcagcgg cgttgttgat gcagatggga
    15661 atattcttat aaacctgtaa gctgttaaag attacccgtc ccttgccgat aaataagcaa
    15721 cacatgataa aagcgccctc aatgaggaat aaaccatgag tattgatcgc acttcgcctc
    15781 tgaatcccgt aagcaccgtt caaccgcgcg aaaccactga cgcgccggta acgaacaccc
    15841 gggcggcaaa aacaaccgac tccaccagca ccagcaccag caccagcacc agcaccagca
    15901 ccagcaccag caccagtgtg acgttaagcg acgcgcaagc aaaactgatg caacccggca
    15961 gcagtgatat caatcttgaa cgtgtcgaag cgttaaaact ggcgattcgt aacggtgaac
    16021 taaaaatgga catcggcaaa attgccgatg cgctgatcaa cgaagctcag caagacttgc
    16081 agagtaactg atcgtatgac acgtcttgca gagatccttg accagatgtc cgctgtgctt
    16141 aacgatctca aaacggtaat ggatcaagag cagcaacatc tctctatggg gcagatcaac
    16201 ggcagccagt tgcaatggat tacagaacaa aaaagctcac tgctggcgac gctggattac
    16261 ctcgaacagt tacgcaagaa agaacccaat acagcaaata gcgttgatat tagtcaacgc
    16321 tggcaggaaa ttactgtgaa aacgcagcaa ctacgccaaa tgaatcaaca taacggttgg
    16381 ttactggaag gacagattga gcgcaatcaa caggcgctgg aaatgttgaa accgcatcag
    16441 gaaccgacgc tatatggggc gaacggtcag acctcaacaa cccatcgcgg cggtaaaaag
    16501 atttcgatct gaagattatc tccggcctgc actgcaggcc ggaatgcatt gttacaccgt
    16561 ccggcgggca aattctttaa ctttgaagcc cagtaccgcc agtgcagcga agtacgcggc
    16621 aatccccgcc agcacgaccg ccattaaacg cagtaagcgc cagggcatgg tacccaatga
    16681 ccactccggc atgatatgta acatacctaa aagcacgcca gacatcacca gtaccgccac
    16741 caccagacgc aacagaaacg ccatccagcc gggttgcgga gtaaagattt tctgcttacg
    16801 caactgccag taaagcagcg aagcattcag acacgccgcc agaccaatag aaagtgacag
    16861 cccggcatgt ttcaacggac caataaacgc caggttcatc aattgcgtta aaatcagcgt
    16921 aacgatggca attttcactg gcgttttaat gtcctggcgg gaataaaagc caggagccaa
    16981 cactttcact acaatcaggc caatcaaacc caccgagtag gcaattaacg cccgctgggt
    17041 catcagcgca tcaaacgcgg taaatttacc gtactggaac agcgaaacgg ttaacggacc
    17101 tgaaagaatg cccaacgcaa ccgcactcgg cagcgccaac aggaaacaaa gacgcaaccc
    17161 ccagtccatc aaacggttgt attcatcatg attgccactg gcaaaacttt tcgacagcga
    17221 cggcagcaaa atggtgccaa gcgccacgcc cagcacaccg gacggaaact ccattaagcg
    17281 gtcggcgtaa tacatccaag acaccgaacc ggaagcaaga aacgaggcaa aaatggtgtt
    17341 gatgattaag gagatctggc tcacagagac gccaaggatc gccggtccca tctgtttcac
    17401 cacgcgcatt gctccggcat cgtggaagtt aatgcgcggc aggaccagca tgccgatctt
    17461 cttcaggtgc ggtagctgat acaccagctg caggatgccg ccgaccgtaa cagcccacgc
    17521 cagcgccagc accggtgggt taaagtacgg tgcggcaaac agcgcgaaac caatcatgct
    17581 gatgttaagc agtgttggcg caaacgccgg aatcgagaag cggttccacg tattcagaat
    17641 cgctcccacc agcgacgcca gggagatcag caagatatag ggaaaggtaa tctttagtag
    17701 ctggctggtc agggcaaatt tgtcagctgt atcagcgaag cctggcgcgg tcaccatgat
    17761 cacccacggt gcggcgagca tgccagcgac cgtcacaacc gccagcgcaa gtgtcagcag
    17821 gccagaaaca taagagacaa agacccgcgt ggcgtcttca ccctgcttac ttttatattc
    17881 cgccagaatc ggtacaaatg cctgggaaaa tgccccttcg gcaaagatac ggcgtaacaa
    17941 gttaggaagt ttaaaagcga cgaaaaaggc gtcggttgcc atccctgcgc caaagattct
    18001 ggcgacaatt gcgtctcgtg cgaagccaag cacacgcgaa aacatggtca tcgagctgac
    18061 ggcggccagc gattttaata aattcatcgg tgttctaatc cagaccaacg ggcaaaacgc
    18121 ctgcaagaca ggcgctgaaa gaggcgaata gtctacctgg attatggtga attgctaccg
    18181 ccagatgtta cagggtttat tcactcatcg catcgcgcca gatcttgtca acgatacgtt
    18241 gcgccagcac ggcctattcg ccggcggttt gcggaactgt ctgattttgc acacattcaa
    18301 tgaagtgccg cgcacagccg acaaatccac gttgttcaag agtgctctgc caaccaggaa
    18361 tcggtttatg cactacgccc tgcccgcgct cctcacgcca ttcgcgcata tccgtaatgt
    18421 cgatgagcgc accgtcagtc acggcctgca cggtttcacg ctgacttccg gcacggcgat
    18481 gcatacaggt ggtgatctgc aaaggaccgg ccgaaaaatg gtgctcggca aacagcattt
    18541 cgccagcgtc gttagtcagt agcgtaccgc catccagaga ggctttgccg cccgacaacc
    18601 acagcgcggt atccaccaca tgcagataat catccagcaa cgtgaaataa agatcgtgtg
    18661 gcccgacact attgctacga tgtttatcca ttcttagcga agctgcggta gcgagttgcg
    18721 tttttaactc accgtagagt ggtgcgaaac gacggttaaa accgaccatc aacgtcagtt
    18781 ttttccgcgc cgccagttcc accagccgtt cagcatcgcg cagattttct gccagcggtt
    18841 tatcgacaca gacatgtaca cccgcattga gtaacgtact gaccacgtca aagtggctgg
    18901 cggtgctgga atgcacaaaa accgcatcgc aactggcggc aaggctggat aacgaatcgg
    18961 cataaggaat gcgccagctt tcacaaattg gcagggcttt cgcgcgcgta ggcgaccagg
    19021 ctccttgtaa catccagtca ggcgctgccg ccagcaccgg taaccacgct ttttgcgcaa
    19081 tgccgcctaa tcccacaacg ccgatacgta attttttcac tttaatctcc cagatgggcc
    19141 agcaacgaat caagacgctg tttcagttct gccacttcga tttccagggc ttcgacgcgg
    19201 gcctgtaaat caccatcaac cgcgttcgac atatccgtta ccgccggctg atcctctacc
    19261 tcaccactga aaagatgcat gtagcggctt tcgcgtttac ccggttcgcg ggccagacgc
    19321 accacaaaag gaccatcttc gcgatttgcc agttgttcca gcgtcgactc caattccgcc
    19381 atatcgctga attcatacat tcgcgcggcg cggctgcgca gttcacccgg cgtctgggca
    19441 ccacgcaata acaacgtggt gattaacgcc acttccgctg cgctcagttt cagatcgcca
    19501 aattctgaat tacaaaaacg ttgttcatat ttggtgaccc gattaccaaa gccactcacc
    19561 gtgcgcagat aatggcgttt gaccagatta tccagttgct cctgcacttc agattcactc
    19621 agattcatga ccggttcacg gttcgttttc tgattacagg ccgtgactac accattgact
    19681 gagagcgggt attgctccgg cgtggtcacc tgcttttcca gcaagcaacc aatcacgcga
    19741 gcttcaaggg cagtaagttg atatttcatg agattctcct tagcggccgg gcgtccagtc
    19801 tggggtagtt aatgccgtca gtacgtgatc gcgccattgt ccatcaatca acagatagtc
    19861 tttcgcatag ccttcttttt caaaacccag tcgcgccagt aaatcaccgc tgcgtttatt
    19921 gtgcggcata taattagcca taatgcgatg aatatgttgg gtgcgctgca tataacgaat
    19981 ggctgcggtc agggcttcaa acatgagtcc tttgccctgc catttttgcc caatcgaata
    20041 accgagatag caggcatgaa aagagccacg aacaacattg gaaaaattgg caacgccaat
    20101 aatctctttt tcgtccgggt cgaataagcc aaagtagaaa gctgaacctt gtttatgaaa
    20161 ttcgttaatc atccccagcc tggcctgcca gcctgatgga taacagtggc tttcgtcgcg
    20221 cactggctcc cagggcttga ggaaatggcg attctctgcg taataatccg caagacgcca
    20281 ggcatcacga tcatgcacca gacgcacgac cagtcggtct gtggttaagc gcacttttgg
    20341 cacgttactg cgatagccaa acattctata cctactcctt cccgtaacgt ctttaatacg
    20401 ctgtaagtat tactatacct gcgcaaccag accctgtgaa aagtccaaaa tgccattttc
    20461 tgcattattc acatatttga taaaaactct ctatcaaagc gacgttttga taaaaaaata
    20521 ttgtccccga agtgatggga aaagtcttag cggcaatgca gaatagaaag tgctcatctt
    20581 ttatttcccg ggaggggaaa tgtcccgcgt atcgcaggcg aggaacctgg gtaaatattt
    20641 cctgctcatc gataatatgc tggtcgtgct ggggttcttt gttgtcttcc cgctgatctc
    20701 tatccgcttc gttgatcaaa tgggctgggc cgccgtcatg gtcggtattg ctctcggtct
    20761 acgccagttt attcagcaag gtctgggtat tttcggcggc gcaattgccg accgctttgg
    20821 tgccaaaccg atgattgtta ccggtatgct gatgcgcgcc gccggattcg ccacaatggg
    20881 tatcgcccac gaaccgtggc tattgtggtt ttcatgcctg ctctcgggac tcggcggcac
    20941 gttgtttgat ccgccgcgtt cggcgctggt ggtgaaacta atccgtccac aacaacgtgg
    21001 tcgttttttc tcgctgttga tgatgcagga cagtgccggt gcggtcattg gcgcattgtt
    21061 ggggagctgg ctgttgcaat acgactttcg cctggtctgc gccacagggg ccgttttgtt
    21121 tgtgctgtgt gcggcgttca atgcgtggtt gttaccggca tggaaactct ccaccgtacg
    21181 cacgcccgtt cgcgaaggca tgacccgcgt gatgcgtgac aagcgttttg tcacctatgt
    21241 cctgacgctg gcgggttact acatgctggc tgtacaagtg atgctgatgc tgccaattat
    21301 ggtcaacgac gtggctggcg cgccctctgc cgttaaatgg atgtatgcca ttgaagcgtg
    21361 tctgtcgtta acgttgctct accctatcgc ccgctggagt gaaaagcatt ttcgtctgga
    21421 acaccggttg atggctgggc tgttgataat gtcattaagc atgatgccgg tgggcatggt
    21481 cagcggcctg caacaacttt tcaccctgat ttgtctgttt tatatcgggt cgatcattgc
    21541 cgagcctgcg cgtgaaacct taagtgcttc gctggcggac gcaagagctc gcggcagcta
    21601 tatggggttt agccgtctgg gtctggcgat tggcggcgct attggttata tcggtggtgg
    21661 ctggctgttt gacctgggca aatcggcgca ccagccagag cttccgtgga tgatgctggg
    21721 aattattggc atcttcactt tccttgcgct gggttggcag tttagtcaga aacgcgccgc
    21781 gcgtcgtttg ctggaacgcg acgcctgatt tgatactccc ccctgactcc tccatactga
    21841 aagtgaactg acagccaaat ggaggagtca cgtgaagcta tacatttacg atcactgccc
    21901 ttactgcctc aaagcccgca tgattttcgg cctgaaaaat atccccgtcg aattacatgt
    21961 tctgctcaac gacgacgcag aaacacccac ccggatggtc ggtcaaaaac aggttcccat
    22021 tctgcaaaaa gatgacagcc gctatatgcc agaaagcatg gatatcgttc actatgtcga
    22081 taaactcgac ggcaaaccgt tactgaccgg caaacgttcc cctgccattg aagagtggct
    22141 gcgcaaggtc aatggctacg ccaacaaact gctgttgccg cgttttgcca aatcggcatt
    22201 tgatgagttt tctactcccg ccgcgcgcaa atatttcgtc gacaagaaag aggccagcgc
    22261 gggtaatttt gccgacctgc tggcccactc tgacggtctg attaagaata tcagcgatga
    22321 tttgcgtgcg ctggacaaac tgatcgtcaa accgaacgcc gtgaatggag aactttcgga
    22381 agatgatatt cagctatttc cgctactgcg taatctgacg ctggtagccg gaatcaactg
    22441 gccaagccgc gttgctgatt accgcgataa tatggcgaaa cagacacaaa tcaatttgtt
    22501 atcatcaatg gcgatttaat cctgacccgc cgcggcagcc tgtattcgcg ggttgccgcc
    22561 gttttcagtt ttttctgctg gcgagtttat cgctggtgac acatgctgcg ttgtgtcagg
    22621 atattgacgc agatttcatg tcgaggacta ccatgaacaa gtttttattt gccgctgcat
    22681 tgatcgtcag tggcctgctc gttggctgta atcaactcac ccaatacacc atcaccgaac
    22741 aagaaattaa ccagtcgctt gcgaaacata ataatttctc aaaagatatc ggtttacccg
    22801 gcgtggctga cgcccatatt gttctgacaa acttgaccag ccaaattggt cgcgaagagc
    22861 cgaataaggt taccctaacc ggagacgcca atctggacat gaactccctg ttcggtagtc
    22921 agaaagcgac catgaaactg aagctgaaag cgctgcccgt gtttgataaa gaaaaaggtg
    22981 cgatcttcct gaaagagatg gaagtggtcg atgcgacggt acaaccggaa aaaatgcaaa
    23041 cggtgatgca aacgttgctt ccctatttga accaggcatt acgcaattac tttaaccagc
    23101 aacctgctta cgtcctgcgc gaagatggca gtcagggcga agcaatggcg aaaaaactgg
    23161 cgaaaggcat tgaagtgaag ccaggcgaaa ttgtcattcc gtttacggat taatgacgag
    23221 ggcgcattcg cgccctttat ttttcgtgca aaggaaaacg tttccgctta tcctttgtgt
    23281 ccggcaaaaa catcccttca gccggagcat agagattaat gactgcacca tcccaggtat
    23341 taaagatccg ccgcccagac gactggcacc ttcacctccg cgatggcgac atgttaaaaa
    23401 ctgtcgtgcc gtataccagc gaaatttatg gacgggctat tgtaatgccc aatctggctc
    23461 cgcccgtgac cactgttgag gctgccgtgg cgtatcgcca gcgtattctt gatgccgtac
    23521 ctgccgggca caatttcacc ccattgatga cctgttattt aacagattcg ctggatccta
    23581 atgagctgga gcgcggattt aacgaaggcg tgttcaccgc tgcaaaactt tatccggcaa
    23641 acgcaaccac taactccagc cacggcgtga cgtcaattga cgcaatcatg ccggtacttg
    23701 agcgcatgga aaaaatcggt atgccgctac tggtgcatgg tgaagtgaca catgcagata
    23761 tcgacatttt tgatcgtgaa gcgcacttta tagaaagcgt gatggaacct ctgcgccagc
    23821 gcctgactgc gctgaaagtc gtttttgagc acatcaccac caaagatgct gccgactatg
    23881 tccgtgacgg aaatgaacgg ctggctgcca ccatcactcc gcagcatctg atgtttaacc
    23941 gcaaccatat gctggttggt ggcgtgcgtc cgcacctgta ttgtttaccc atcctcaaac
    24001 gcaatattca ccaacaggca ttgcgtgaac tggtcgccag cggttttaat cgagtattcc
    24061 tcggtacgga ttctgcgcca catgcacgtc atcgcaaaga gagcagttgc ggctgcgcgg
    24121 gctgcttcaa cgccccaacc gcgctgggca gttacgctac cgtctttgaa gagatgaatg
    24181 ctctgcagca ctttgaagca ttctgttctg taaacggccc gcagttctat ggcttgccgg
    24241 tcaacgacac attcatcgaa ctggtacgtg aagagcaaca ggttgctgaa agcatcgcac
    24301 tgactgatga caccctggtg ccattcctcg ccggggaaac ggtacgctgg tccgttaaac
    24361 aataaaaatc gtagcttcct gttgtcatta ggttatttta cctgtataaa taaccagtat
    24421 attcaacagg gggctattat gcgaattgaa gtcaccatag cgaaaacttc tccattgcca
    24481 gctggggcta ttgacgccct ggctggcgaa ctttcccgcc gtattcagta tgcgtttcct
    24541 gataatgaag gccacgtatc ggtacgttat gccgcagcga ataatttatc ggttattggc
    24601 gtaacaaaag aagataaaca gcgcattagc gaaattctcc aggaaacgtg ggaaagcgcc
    24661 gatgactggt ttgtcagcga ataatatgca gtgatttttg tttttgccgg gtcgccccgg
    24721 cttttttatt ttacttacaa attttgagta caaaatttct acacttcctc aaaataattg
    24781 cacaatatgc taaaaaaata tgaatgacat gctgttttat tgttcatata aatcttaaaa
    24841 gcagaaattt atctgttccc ccctttaaaa attcggtgaa tacccttact tattggtata
    24901 ctgaagttgc ttcagataaa aacgcattga acctcgaata acgttgtcta gtaacacgaa
    24961 ttagggggcc atgatggaaa aaaataatga agtcattcag actcatccgc tcgtagggtg
    25021 ggacatcagc accgttgata gctatgatgc gctgatgttg cgtttgcact accagacccc
    25081 aaataagtcc gagcaggaag ggactgaagt tggtcagacg ctctggttaa ccactgatgt
    25141 tgccagacaa tttatttcga tattagaagc aggaatcgcc aaaattgaat ccggtgattt
    25201 cccggtaaac gagtatcggc gtcattaaca tgacatgacc atccacccaa aaggcacctc
    25261 accggtgcct ttaccatttc tgggttgtat atctgcattc agttaattac tctgcttaaa
    25321 ccatgagagc agagagaaaa aaatgaaata cgatctcatc attattggca gcggttccgt
    25381 aggcgctgcc gccgggtatt atgcaacccg cgccggttta aacgtgctaa tgaccgacgc
    25441 ccatatgcca ccgcatcaac acggcagcca ccacggcgat acgcgattaa ttcgccatgc
    25501 ttatggtgaa ggcgaaaagt atgtcccgtt ggtcctccgc gcgcaaacgc tgtgggatga
    25561 actttcccgc cacaacgaag atgatcccat ttttgtacgc tctggtgtca ttaacctcgg
    25621 cccggctgac tccgcatttc tcgccaacgt cgcccacagc gccgaacagt ggcaactcaa
    25681 cgttgaaaag ctcgatgcgc aagggattat ggcccgctgg ccagaaatac gcgtcccgga
    25741 caactacatc ggcttatttg agactgattc cggttttttg cgcagcgaac tggcgattaa
    25801 aacctggatc caactggcga aggaagcggg ctgtgcgcaa ctgttcaact gcccggtcac
    25861 cgcaattcgt catgacgatg atggcgtaac tattgaaacc gttgacggtg agtatcaggc
    25921 gaaaaaagcg attgtctgca cgggaacatg ggtaaaagac ctgctcccgg agctgcctgt
    25981 ccagcctgta cgtaaagtat ttgcctggta tcaggccgat ggccgctata gcgtgaagaa
    26041 taaattcccg gcgtttaccg gtgaactgcc caatggcgat caatattatg gttttccggc
    26101 agaaaacgac gcgttgaaga ttggcaaaca taacggaggc caggttatcc attcagcgga
    26161 tgaacgtgtt ccgtttgcgg aagtggtcag cgatggttcg gaagccttcc cgttcttgcg
    26221 caatgtattg ccgggtatcg gttgctgcct gtacggcgct gcctgcacct atgataattc
    26281 gcctgacgaa gattttatta tcgataccct acccggccac gataatacac tgctcattac
    26341 cggcctgagt gggcacggtt ttaaatttgc gtcagtttta ggggaaatag ctgccgattt
    26401 tgcgcaagac aaaaaaagcg attttgattt gacgccattc aggctttccc gcttccaata
    26461 atcatcatta cggcctccag aatgaggccg tttttacagg agtatttaat gcgtcggctg
    26521 ttgcactatc tcatcaataa tattcgcgag catctgatgc tttatctttt tctctgggga
    26581 ttgttggcaa ttatggatct gatctatgtg ttttattttt agttttccgc actgacataa
    26641 actgacaaat atttaatctc cctttcattt agcgtgaaaa attgaatgaa attattcctg
    26701 cttctacagc actcaccaga catctctgat gctgaaccca ctaaacttat gaagattctt
    26761 tcattattaa ttcaaaatta ttgaaataaa aataaatatc attcaatttg ttatttttgt
    26821 gttgcaattc attctccgac acgccatttt ctttctctcg caaattcgta ttggatgcac
    26881 ttatgtcatt cacaaatacc cctgaacgct atggtgttat atctgcggcc ttccattggc
    26941 taagcgcaat tattgtctac ggcatgttta ctttaggtct gtggatggtc acgctcagtt
    27001 attacgatgg ctggtatcac aaagcacccg aactgcataa aagcatcggt attttgttaa
    27061 tgatggggct ggttattcgc gttctgtggc gtgtcatatc tccaccgccg ggtccgctgc
    27121 cgagttattc gcccatgact cgtcttgccg caaaggctgg acatctcgca ttgtacctat
    27181 tgctgttcgc catcggcatc agcggctatc tgatctcaac tgccgatggt aaaccgatca
    27241 gcgtttttgg ctggtttgac gtccccgcga cccttgccga cgctggcgca caggcagact
    27301 ttgccggtgc cctgcatttt tggctcgcgt ggagcgtcgt agtactgtcc gttatgcacg
    27361 gatttatggc cctgaagcat catttcatcg ataaagacga cactctgaag cgcatgctgg
    27421 gaaagtcgtc atctgactat ggagtataaa aaatgaaaaa aagcctgctt ggtttaacct
    27481 tcgcgtccct gatgttctct gccggttcag cggttgccgc cgattacaaa attgacaaag
    27541 aaggtcagca cgcctttgtt aatttccgca tccagcacct tggctatagc tggttatacg
    27601 gcacctttaa agatttcgac ggtactttta cctttgacga aaaaaatccg gctgccgata
    27661 aagtgaatgt gacaattaac accaccagcg tcgatactaa tcacgccgaa cgcgataaac
    27721 atcttcgcag tgcagatttc ctcaataccg caaaatatcc acaggcaaca ttcacctcca
    27781 ccagcgtgaa gaaagacggt gacgaactgg atattaccgg cgatctgacg ctgaatggcg
    27841 taaccaaacc cgtcacgctg gaagcgaaat taattggtca gggcaacgac ccatggggtg
    27901 gtaaacgtgc aggcttcgag gccgaaggca aaattaagct caaggacttc aatatcaaga
    27961 cagatttagg tccagcttct caggaagtgg atctgattat ttcagtggaa ggcgtacagc
    28021 agaagtaagc gtgaaatgtt gccggatggc acgcatccgg caatgatatt tattctgttg
    28081 gatcaggaat gcccagtgtt gtattcagac gtccacgaga cttattaaag atcttattgc
    28141 cattttcacg tcctgcccga cggcgtcgct gttcttctgg cggtaacgcg ctttcttcgc
    28201 agcaaatctc actacaacaa cctttgtatt tttccgcgca tactggacac tgaataaaca
    28261 gcaggtggca gccatcattt ttacagttgg tatggctgtc gcacggcgcg ccgcactggt
    28321 ggcaatgcgc gataatctca tccgatatac gttcgcccat ccgctcgtca aaaacaaaat
    28381 ttttgccaat aaaacgcacc ggcaagccct gctcgcgcgc cttacgggcg tattcaataa
    28441 ttccgccctc gatatgccag actttgttga atccgttatg tttcatccaa gcactggcct
    28501 tttcacaacg aatgccgccg gtgcagtaca tgacgatttt tttatcttta tgtgcctgca
    28561 tcatctcgac tgcttttggc agctgctcac ggaaggtatc tgccggaatt tcgagcgcgt
    28621 tttcaaagtg ccccacttca tactcatagt ggttac
//
LOCUS       DADMIB010000036        28248 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.036, whole genome shotgun sequence.
ACCESSION   DADMIB010000036 DADMIB010000000
VERSION     DADMIB010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 28248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28248
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.036"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..322)
                     /locus_tag="JNZ89_001516"
     CDS             complement(<1..322)
                     /locus_tag="JNZ89_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HAY8935431.1"
                     /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA
                     VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIITILVVGSIWIMWNL
                     NYNMM"
     gene            complement(322..936)
                     /locus_tag="JNZ89_001517"
     CDS             complement(322..936)
                     /locus_tag="JNZ89_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HAY8935432.1"
                     /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF
                     ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL
                     ALTCLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
                     MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM"
     gene            complement(926..2917)
                     /gene="cyoB"
                     /locus_tag="JNZ89_001518"
     CDS             complement(926..2917)
                     /gene="cyoB"
                     /locus_tag="JNZ89_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002444673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HAY8935433.1"
                     /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL
                     WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
                     FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
                     GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP
                     GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
                     NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
                     FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFS
                     VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
                     TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG
                     ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWANSSPPPFYNFAVVPHVHERDAFWE
                     MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT
                     WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN"
     gene            complement(2939..3886)
                     /gene="cyoA"
                     /locus_tag="JNZ89_001519"
     CDS             complement(2939..3886)
                     /gene="cyoA"
                     /locus_tag="JNZ89_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit II"
                     /protein_id="HAY8935434.1"
                     /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI
                     LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
                     LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
                     VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
                     KFKAIATPDRAEFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD
                     VINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH"
     gene            complement(4347..5822)
                     /gene="ampG"
                     /locus_tag="JNZ89_001520"
     CDS             complement(4347..5822)
                     /gene="ampG"
                     /locus_tag="JNZ89_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muropeptide MFS transporter AmpG"
                     /protein_id="HAY8935435.1"
                     /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
                     DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE
                     PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
                     GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF
                     FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
                     LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT
                     SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA
                     VPGLILLLVCRQTLEYTRVNDNFISRTEYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA
                     LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT"
     gene            complement(5866..6444)
                     /locus_tag="JNZ89_001521"
     CDS             complement(5866..6444)
                     /locus_tag="JNZ89_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8935436.1"
                     /translation="MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVT
                     VSINGADQRTDQALAKVTRDNQIVTLAASRDLRFLLQEVLEKQMTARGYMVGPNGPVN
                     LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKITKNYRASYNVEGAFQASNK
                     NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR"
     gene            6749..7066
                     /gene="bolA"
                     /locus_tag="JNZ89_001522"
     CDS             6749..7066
                     /gene="bolA"
                     /locus_tag="JNZ89_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BolA"
                     /protein_id="HAY8935437.1"
                     /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV
                     SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG
                     SIA"
     gene            7410..8708
                     /gene="tig"
                     /locus_tag="JNZ89_001523"
     CDS             7410..8708
                     /gene="tig"
                     /locus_tag="JNZ89_001523"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HAY8935438.1"
                     /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
                     RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED
                     FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDSAVEA
                     EDRVTIDFTGSVDSEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP
                     EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER
                     ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR
                     ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
                     ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA"
     gene            8953..9576
                     /gene="clpP"
                     /locus_tag="JNZ89_001524"
     CDS             8953..9576
                     /gene="clpP"
                     /locus_tag="JNZ89_001524"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HAY8935439.1"
                     /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
                     LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
                     TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
                     GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
     gene            9702..10976
                     /gene="clpX"
                     /locus_tag="JNZ89_001525"
     CDS             9702..10976
                     /gene="clpX"
                     /locus_tag="JNZ89_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HAY8935440.1"
                     /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
                     NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
                     DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
                     IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA
                     KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
                     KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED
                     VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE"
     gene            11164..13518
                     /gene="lon"
                     /locus_tag="JNZ89_001526"
     CDS             11164..13518
                     /gene="lon"
                     /locus_tag="JNZ89_001526"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HAY8935441.1"
                     /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
                     DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
                     LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
                     DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
                     KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
                     KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
                     LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR
                     GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
                     AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
                     KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK
                     HIEINGDNLHDYLGVQRFDYGRADNENCVGQVTGLAWTEVGGDLLTIETACVPGKGKL
                     TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
                     AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
                     KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
     gene            13727..13999
                     /gene="hupB"
                     /locus_tag="JNZ89_001527"
     CDS             13727..13999
                     /gene="hupB"
                     /locus_tag="JNZ89_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-beta"
                     /protein_id="HAY8935442.1"
                     /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
                     VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
     gene            14191..16062
                     /gene="ppiD"
                     /locus_tag="JNZ89_001528"
     CDS             14191..16062
                     /gene="ppiD"
                     /locus_tag="JNZ89_001528"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HAY8935443.1"
                     /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK
                     VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD
                     QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL
                     TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY
                     EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT
                     KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE
                     KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS
                     DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG
                     INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV
                     DLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN
                     VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
     gene            16213..16584
                     /locus_tag="JNZ89_001529"
     CDS             16213..16584
                     /locus_tag="JNZ89_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935444.1"
                     /translation="MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAA
                     QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED
                     LKQVPGMGNSLVERNLAVLTL"
     gene            16678..17076
                     /locus_tag="JNZ89_001530"
     CDS             16678..17076
                     /locus_tag="JNZ89_001530"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HAY8935445.1"
                     /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM
                     TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA
                     LITFVCIDLKTQKALALEGELREKLEQMVK"
     gene            complement(17128..17823)
                     /gene="queC"
                     /locus_tag="JNZ89_001531"
     CDS             complement(17128..17823)
                     /gene="queC"
                     /locus_tag="JNZ89_001531"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HAY8935446.1"
                     /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID
                     VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL
                     FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL
                     MWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKP
                     TVMAAMKQKTGLR"
     gene            complement(17888..19588)
                     /locus_tag="JNZ89_001532"
     CDS             complement(17888..19588)
                     /locus_tag="JNZ89_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HAY8935447.1"
                     /translation="MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLL
                     RQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLALG
                     ELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
                     NTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQ
                     LFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTA
                     ELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQV
                     SSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWT
                     IPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTT
                     LLAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQVMPDEE
                     NRFNALKAVFSQLMADATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ
                     "
     gene            19688..20443
                     /gene="cof"
                     /locus_tag="JNZ89_001533"
     CDS             19688..20443
                     /gene="cof"
                     /locus_tag="JNZ89_001533"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP-PP phosphatase"
                     /protein_id="HAY8935448.1"
                     /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR
                     HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM
                     HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI
                     QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE
                     MLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRN"
     gene            20572..21117
                     /locus_tag="JNZ89_001534"
     CDS             20572..21117
                     /locus_tag="JNZ89_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706341.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HAY8935449.1"
                     /translation="MVFKPHRINCRDFTFKIELKEKKILCGRAMLDKIDRKLLALLQQ
                     DCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIGLGLTAFVLIKTQ
                     HHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFYKRLVNSVPGL
                     SDVTSSFAMEQIKYTTSLPIE"
     gene            21147..22919
                     /locus_tag="JNZ89_001535"
     CDS             21147..22919
                     /locus_tag="JNZ89_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HAY8935450.1"
                     /translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD
                     GVTEQHFTTGQILMWIATMVLIAVVVYFLRYVWRVLLFGASYQLAVELREDYYRQLSR
                     QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL
                     TLFALLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
                     QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ
                     LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE
                     LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD
                     IRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLAS
                     VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE
                     HQILHNLRQWGQGRTVIISAHRLSALTEASENIVMQHGHIAQRGNHDELAQQSGWYRD
                     MYRYQQLEAALDDAPEIREEAVDA"
     gene            22912..24693
                     /locus_tag="JNZ89_001536"
     CDS             22912..24693
                     /locus_tag="JNZ89_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdB family multidrug efflux ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HAY8935451.1"
                     /translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL
                     LISYFIDNMVAKNNLPLKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRT
                     DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAM
                     FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ
                     QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS
                     GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDR
                     PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP
                     LTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL
                     ETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID
                     SGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQG
                     RYWQMYQLQLAGEELAASVREEESLSA"
     gene            24874..25212
                     /gene="glnK"
                     /locus_tag="JNZ89_001537"
     CDS             24874..25212
                     /gene="glnK"
                     /locus_tag="JNZ89_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HAY8935452.1"
                     /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
                     LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI
                     RTGEADEAAL"
     gene            25242..26528
                     /gene="amtB"
                     /locus_tag="JNZ89_001538"
     CDS             25242..26528
                     /gene="amtB"
                     /locus_tag="JNZ89_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter AmtB"
                     /protein_id="HAY8935453.1"
                     /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF
                     MTIPGIALFYGGLIRGKNVLSMLMQVTVTFALVCILWVVYGYSLAFGEGNNFFGNVNW
                     LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL
                     SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
                     NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG
                     KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC
                     DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA
                     FIGYKLADLTVGLRVPEEQELEGLDVNSHGENAYNA"
     gene            complement(26577..27437)
                     /gene="tesB"
                     /locus_tag="JNZ89_001539"
     CDS             complement(26577..27437)
                     /gene="tesB"
                     /locus_tag="JNZ89_001539"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HAY8935454.1"
                     /translation="MSQALKNLLALLNLEKIEAGLFRGQSEDLGLRQVFGGQVVGQAL
                     YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF
                     YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV
                     RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG
                     FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST
                     VQEGVMRNHN"
     gene            27655..28227
                     /locus_tag="JNZ89_001540"
     CDS             27655..28227
                     /locus_tag="JNZ89_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY8935455.1"
                     /translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA
                     IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV
                     LPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINKGGTKADLTLVPVQQTAVPV
                     QASGGATTTVPSTSPTQVNPSSAVPAPTQY"
BASE COUNT         7109 a         6888 c         7690 g         6561 t
ORIGIN      
        1 tcatcatgtt gtagttgagg ttccacataa tccagatgga gcctacaacc aggatagtga
       61 tgattagcac ggtgaagaca aacgccgtca tgttccagcc ttcatctgat ttggtattca
      121 tgtgcaggaa gcacaccaga tgcaccagaa cctgtaccac tgccattgcc aggattgttc
      181 ccagaattac ggccggagag gcagcccctg tcatcaccat ccagaacgga atcaccgtca
      241 gaatgatcga caggataaag cctgtcatgt aggtttttac gctgccatgg gacgcgccgc
      301 tgtgatcggt agaatgactc attacatcgc ccccatcaga taaacaacag tgaacacaca
      361 gatccaaacc acatccagga agtgccagaa caggctcagg cacatgatgc gggtacggtt
      421 agtgctggtc aggccgcgac gagcgatttg taccatcagc accgccatcc agataagacc
      481 ggaagtgacg tgcagaccgt gcgtgccgac cagcgcaaag aacgctgaca ggaagccgct
      541 gcgatccgga cccatgccgt taacaatcag gtgatggaat tcgtagattt ccatcccgat
      601 aaatccggca ccaaacaaac aggtcaacgc cagccaggag ataacctggc ttttgttgtt
      661 tttgtacatg gcgatagccg ccatgccgta ggtgatggag ctgaacaaca gcaagaaagt
      721 ttcaaccaga acgaacggca gttcgaaaat gtccttacct gtcgggccgc ctgcggtgcc
      781 gttcaccaga acggcatagg tagcaaacaa gattgagaac agaatgcagt cgctcatcag
      841 gtagatccaa aatccgaaga ttttggttcc gcctgcatcg tggtgcccgt gttcgtgcgc
      901 gtgggcagtc gcgtgcgtca aagtatcagt tgccattttt cagccctgcc ttagtaatct
      961 catcgaaatg ctggttttcc agtttttcga tttctgccac cggcacgtag taatccacgt
     1021 cctcgtcgaa gcttttcacg atccaggtga tgatcatgcc tgcgaagcca acaatcgcca
     1081 gccaccagat atgccagatc atggcgaaac cgaagatggt ggagaaagct gcaatgacga
     1141 tacctgcacc gctgtttttc ggcatatgaa tttcttcata gtggtcaggc tttttatacg
     1201 cttcgccttt ctctttcatt tcccagaatg catcacgctc gtgaacgtgc ggcacaacgg
     1261 caaagttata gaacggaggc ggggaagagt ttgcccactc cagcgtacgg ccaccccacg
     1321 ggtcgccagt caggtcacgg ttctggtcgc ggtcgcgaat agaaacgtac atctgaataa
     1381 cgaggcagag aatacccagc gcaatcagta ctgcaccgct agctgcaatc atcagcatgg
     1441 tgtggaactg cgggtcaatc tgctggctca aacgacgggt catgcccatg aagcccagcg
     1501 catacagcgg cataaaggca acgaagaagc cgatgatcca gaaccagaac gcgcgtttac
     1561 cccaggtttc attcagtttg aaaccgaacg ctttaggcca ccagtaggtc atccctgcga
     1621 agcagccgaa gaccacgccg ccgatgataa cgttatggaa gtgcgcaatc aggaacaggc
     1681 tgttatgcag aacgaagtcc gcgcccggta ctgccagcag cacgccagtc atcccgccca
     1741 ccgagaaagt gacgataaaa ccgatggtcc acagcatcgc agaatggaac acgatacggc
     1801 cctgatacat ggtgaacagc cagttgaaga tcttcacccc ggtcgggatg gcgataatca
     1861 ttgtggtgat accaaagaag gcgtttacgt tcgcgcccgc acccatcgta aagaagtggt
     1921 gcagccaaac gatgaacgac agcacggtga tacagacggt tgcccatacc agcgaggtat
     1981 aaccaaacag acgtttacgc gagaaggttg ccgcaatttc ggagaacaca ccgaaaacag
     2041 gcaggatcag gatgtaaact tccgggtggc cccaggccca aatcaggttg atgtacatca
     2101 tcatgttgcc acccatatcg ttggtaaaga aatgggtgcc cagatagcga tccagggtca
     2161 acaacgcgac ggtaaccgtc agaattggga aggaagcaat aatcagtacg ttcgcgcaca
     2221 gtgatgccca ggtaaatact ggcatcttga acatggtcat gcccggtgcg cgcatcttca
     2281 gaatggtaac gaagaagttg ataccggtaa gcgtcgtacc tataccggat agctggagac
     2341 tccatatcca gtaatcaaca ccgactcccg gactgtactc tattcccgat agcggtggat
     2401 aggccagcca gccggtctgc gcaaattcgc ccacgccgag agaaacgtta accagaatca
     2461 caccaacaac agtaaaccag aagcttaagt tgttgaggaa cgggaacgca acgtcacgcg
     2521 cgccgatctg cagcggaacc accaggttca tcagaccgat aacgaaaggc atcgccacga
     2581 agaagatcat aatcacgccg tgcgcggtga agatctgatc gtagtggtga ggtggcagga
     2641 agcccgcttc gcccgccgag gcaagagcct gctggctacg catcataatg gcgtcagcaa
     2701 aaccacgcag caacatcaca atcgccacga tgatatacat gataccgagg cgtttatggt
     2761 cgacggaggt cagccactct ttccacaggt aggtccactt accgaagtaa gtgatcaggc
     2821 caacgagcgc cagacctccc aaaataatgc cagcgatcgt aaccatgacg ataggttcat
     2881 ggaacgggac tgcatcaagt gataattttc cgaacatctt tattcttcct caaccccttt
     2941 aatgggcgga ttccgcgtgg ctcatgtcca tgccttccat accttcgtgt gcgctgtgct
     3001 caccttctgg ctgggtcatg tccatgctct taccgtgagc cataaacttg ttaatcacat
     3061 cagcaaacaa gtctggtttc acgttggaga aatattccac ctggttgtat tcgctaggcg
     3121 cggccagttt ttcgaacgca gccatgtcag acatggtgtt cggcgactgc ttcgcttttg
     3181 cgacccactg gtcgaattcg gcgcgatccg gtgttgcaat agctttgaac ttcatgcctg
     3241 agaagcccgg gccgctgtag ctggcggaga taccgtcata agtaccgggt tcgttggcga
     3301 tcagatgcag gcgagtctgc ataccagcca tggcataaat ctggctaccc agacgcggaa
     3361 tgaagaagga gttcatcacg gagttggagg tcactttgaa gtacaccgga gtgttcgccg
     3421 ggaaagcgat ttcattcacg gtagcaatgc cctgttccgg gtagatgaag aaccatttcc
     3481 agtccatgga aaccacttcg atggtaatgg gcttctcgtc gtgtgccagc ggcttgctag
     3541 gctcaagagc gtgagtggtt ttccaggtca gtaccgcaag gaagatgatg attaagatag
     3601 gtaccgtcca gaccacagct tccactttat tggagtgtga ccagttcggg ctgtacttag
     3661 catctttatt gctcgcacga tacttccagg cgaaaccaac agccatcaag attgcgggaa
     3721 taacgacaat caacatcagg ccaaatgccg tcagtatcag tgaacgttgc tccagaccaa
     3781 tctgtccttt gggatctaac agcgcagaat tacagccact gagcaataca gtgcctgcaa
     3841 ataatgacaa ccatcccaaa cttttattgt atttcctgag tctcatttaa cgacctcaat
     3901 tccacgggat ctggtggcgt ttaaagtgtg tgggcatttt atggggaggt tacattactg
     3961 taaacatgat taaattcctg ttacttggat ttgattgtca ggtcacatat gttgcaaaac
     4021 atatcaagtt gattttaaga agctgttgca aaagggcgtt ataacgaaag gggagtgcag
     4081 aaggagtttg gatgggcaat tggtataacc aatctggaat aaaataattg tttaacaaat
     4141 aattatcatt atggtgacaa ttgggtgggg ggaaaataaa gactcgttag ctgaatcgtg
     4201 taagaaaaaa tagaattcat aaattgcgtc aataatttcc aaacgctaag ccgcacaaaa
     4261 gaacaaatat tattaagcga tactgatgtt tatttagccg taataattac ggcgagtgat
     4321 tactacagct aaataatatt tacagattac gtcagatgcg tttttcgtag agccagataa
     4381 tccagcaaac caccaagcac gacgccagaa agggcgacta aaaccccgac ttccagcaga
     4441 gcaggcagga aagagaagtg cgtcaaatcc agcgcgtcca tcgtcaacag cagtaaccac
     4501 acggccaaca ggctgacgcc cgccgccagt gtccacatgg caaaggcata acctgccgga
     4561 tattcggtac gggagataaa gttgtcattt actcgtgtat attcaagcgt ctggcggcaa
     4621 accagcagca aaataagccc cggtacggca gcggcgacgg agaatagata gaatgtcgac
     4681 cagccgtgtg cttcaacaaa ccaacccgcc acggggccga cataaactcg tcctacagcg
     4741 gaaagcgctg agagcagggc aaattgagta gcggaaaatg acttattaca cagcgtcatt
     4801 aacagcgcga caaaggctga tgtgcccatc ccgccacaga ggttttcgaa aaagacggct
     4861 gcgcccatgc tgtagagatg cttatcagta atcgacagca gccagtaacc agcgttagac
     4921 gcaccttgta aaatgccgaa aatcagcagc gcccggaaca gcgacaggcg ctgcatcaaa
     4981 atcccaccgt acaatgcgcc cacaatggtc gccagtaagc caagcgtttt gttaaccacg
     5041 cctacttcac ccgcatcaaa cccgacgccg cgaatcaaaa acgtggttgt caggctcatg
     5101 gcgaatgcgt cgcccagctt atacagcacg ataagaagca aaataagcca ggcattattg
     5161 cgaccaaaga aatctcgcag aggtgcaaca accgcttgtt ccagcgtttt tggcacagga
     5221 atggtgtcgg tcggttctgg tgcaagcaac gtcgcgataa tacaagggat caacagcgcc
     5281 gccatcaacc agtacatgcc ctgccagccc agccatttat ctgccagcca cagggctaag
     5341 ccgccggaaa ccagcatccc taaacggtaa cccagcacgc tgattgccgc gcccgcacca
     5401 cgttcttctg ccgggagcac atcggttttc cacgcatcga agacaatatc ctgggaggcc
     5461 gagcaaaaag cgatcaccac cgccagtgcc gccatccagc ggagttgggt gccaggttcg
     5521 agaaaaccca tcgccgcaat ggcgactaat aacaggattt gcgtggcgag cagccaaccg
     5581 cgccgccgcc caaaaaatgg gggcgtgtag cggtccatca gcggtgacca gaggaattta
     5641 aaaacgtaag cctggcctac cagagagaag aaaccaatgg ttttgagatc aatattctcg
     5701 accgtcatcc aagcctgtaa ggtaccggat gtcagggcga gcggtagccc ggaagcaaaa
     5761 cccaggatca gcaatatggc tgaacgcggc tgttgaaaaa tacgtaaata ttgactggac
     5821 atgggcgtct acaggcccgg tttgcaccgg gccagagggc agaaattaac gcgcgttctg
     5881 cttgatgaat tcgtgaatgc tggtgtcctg agacatatca gcgatggtat cggtcagcac
     5941 actgttaacc gcatcggcga tatttttgtt ggaggcctgg aacgcacctt caacgttgta
     6001 gctggcacga tagtttttgg ttattttgtt gccattctgc gcggtagcga tgatggcgat
     6061 atccgctttg gtagcgatgt tgtagcgcac gttgccctgg gacacgtcag catacagttg
     6121 gctaacgatg atttgcagat taaccgggcc attcggacca accatgtaac cacgcgcggt
     6181 catctgtttt tccagcactt cttgcagcag gaaacgcaga tcgcgggagg cggccagggt
     6241 aacgatttga ttatcgcggg tgacttttgc cagcgcctga tcggtacgct gatcggcacc
     6301 attaatgctt acggtgacgc ccatcaggct tggatcctgc tgtggcagtg taatcgtcgg
     6361 ggaaacttca atagttgttg gcggttttgc gcatcctgca agcataaaca gagcaactaa
     6421 cgggaagagg atttttttga acatgttcgg gctctcagag actcttaagc gtgtttggta
     6481 aaaattcccg ccatcataac attgccaacg gcgaggggaa gtgggtaagg catgtaaatt
     6541 catcatgttg acgaaataat cacccctggt aaaagaaacg ctgatgcgag gcctgtgttt
     6601 caatctttaa atcagtaaac ttcatacgct tgacggaaaa accaggacga aacctaaata
     6661 tttgttgtta agctgcaatg gaaacggtaa aagcggctag tatttaaagg gatggatgac
     6721 atctcagcgt tgtcggagga gatatttcat gatgatacgt gagcggatag aagaaaaatt
     6781 aagggcggcg ttccaacccg tattcctcga agtagtggat gaaagctatc gtcacaatgt
     6841 cccagccggc tctgaaagcc attttaaagt tgtgctggtc agcgatcgtt ttacgggtga
     6901 acgttttctg aatcgtcatc gaatgattta cagtacttta gcggaggaac tctctactac
     6961 cgttcatgcg ctggctctgc atacttacac tattaaggag tgggaagggt tgcaggacac
     7021 cgtctttgcc tctcctccct gtcgtggagc aggaagcatc gcgtaaaaac gcatttgcaa
     7081 ctgtcggcgc tttttcagta tgttgctaaa gattttatga aaaacggcct gcgggccgtt
     7141 ttgttttgtc tggattttgc gctttttgcc cagcattcag acgaaaattg cccgggaatt
     7201 gtgaaaaaat acgcgacagc gcgcaataac cgttctcgac tcataaaagt gatgccgcta
     7261 taatgccgcg tcctatttga atgctttcgg gatgattctg gtaacaggga atgtgattga
     7321 ttataagaac atcccggttc cgcgaagcca acaacctgtg cttgcggggt aagagttgac
     7381 cgagcactgt gattttttga ggtaacaaga tgcaagtttc agttgaaacc actcaaggcc
     7441 ttggccgccg tgtaacgatt actatcgctg ctgacagcat cgagaccgct gttaaaagcg
     7501 agctggtcaa cgttgcgaaa aaagtacgta ttgacggctt ccgcaaaggc aaagtgccaa
     7561 tgaatatcgt tgctcagcgt tatggcgcgt ctgtacgcca ggacgttctg ggtgacctga
     7621 tgagccgtaa cttcattgac gccatcatta aagaaaaaat caatccggct ggcgcaccga
     7681 cttatgttcc gggcgaatac aagctgggtg aagacttcac ttactctgta gagtttgaag
     7741 tttatccgga agttgaactg cagggtctgg aagcgatcga agttgaaaaa ccgatcgttg
     7801 aagtgaccga cgctgacgtt gacggcatgc tggatactct gcgtaaacag caggcgacct
     7861 ggaaagaaaa agacagcgct gttgaagcag aagaccgcgt aaccatcgac ttcaccggtt
     7921 ctgtagacag cgaagagttc gaaggcggta aagcgtctga tttcgtactg gcgatgggcc
     7981 agggtcgtat gatcccgggc tttgaagacg gtatcaaagg ccacaaagct ggcgaagagt
     8041 tcaccatcga cgtgaccttc ccggaagaat accacgcaga aaacctgaaa ggtaaagcag
     8101 cgaaattcgc tatcaacctg aagaaagttg aagagcgtga actgccggaa ctgactgcag
     8161 aattcatcaa acgtttcggc gttgaagatg gttccgtaga aggtctgcgc gctgaagtgc
     8221 gtaaaaacat ggagcgcgag ctgaagagcg ccatccgtaa ccgcgttaag tctcaggcga
     8281 tcgaaggtct ggtaaaagct aacgacatcg acgtaccggc tgcgctgatc gacagcgaaa
     8341 tcgacgttct gcgtcgccag gctgcacagc gtttcggtgg caacgaaaaa caagctctgg
     8401 aactgccgcg cgaactgttc gaagaacagg ctaaacgccg cgtagttgtt ggcctgctgc
     8461 tgggcgaagt tatccgcacc aacgagctga aagctgacga agagcgcgtg aaaggcctga
     8521 tcgaagagat ggcttctgcg tacgaagatc cgaaagaagt tatcgagttc tacagcaaaa
     8581 acaaagaact gatggacaac atgcgcaatg ttgctctgga agaacaggct gttgaagctg
     8641 tactggcgaa agcgaaagtg actgaaaaag aaaccacttt caacgagctg atgaaccagc
     8701 aggcgtaatt tacgcagcat aacgcgctaa attcgcacaa aggcccgtca ccgccaggtg
     8761 gtgggctttt tttgtcatga attttgcatg gaaccgtgcg aaaagcctct ttcggtgtta
     8821 gcgtaacaac aaaagattgt tatgcttgaa atatggtgat gccgtaccca taacacaggg
     8881 actagctgat aatccgtcca taaggttaca atcggtacag caggtttttt caattttatc
     8941 caggagacgg aaatgtcata cagcggcgaa cgagataact ttgcacccca tatggcgctg
     9001 gtgccgatgg tcattgaaca gacctcacgc ggtgagcgct cttttgatat ctattctcgt
     9061 ctacttaagg aacgcgtcat ttttctgact ggccaggttg aagaccacat ggctaacctg
     9121 attgtggcgc agatgctgtt cctggaagcg gaaaacccag aaaaagatat ctatctgtac
     9181 attaactccc caggcggggt gatcactgcc gggatgtcta tctatgacac catgcagttt
     9241 atcaagcctg atgtcagcac catctgtatg ggccaggcgg cctcgatggg cgctttcttg
     9301 ctgaccgcag gggcaaaagg taaacgtttt tgcctgccga attcgcgcgt gatgattcac
     9361 caaccgttgg gcggctacca gggccaggcg accgatatcg aaattcatgc ccgtgaaatt
     9421 ctgaaagtta aagggcgcat gaatgaactt atggcgcttc atacgggtca atcattagaa
     9481 cagattgaac gtgataccga gcgcgatcgc ttcctttccg cccctgaagc ggtggaatac
     9541 ggtctggtcg attcgattct gacccatcgt aattgatgcc agaggcgcaa ctgtgccgct
     9601 atacttatcc agggcggcac aacgctgtaa gcggcttgcg cctgagaatg gcatttgcgt
     9661 cgtcgtgtgc ggcacaaaga acaaagaaga ggttttgacc catgacagat aaacgcaaag
     9721 atggctcagg caaattgctg tattgctctt tttgcggcaa aagccagcat gaagtgcgca
     9781 agctgattgc cggtccatcc gtgtatatct gcgacgaatg tgttgattta tgtaacgaca
     9841 tcattcgcga agagattaaa gaagttgcac cgcatcgtga acgcagtgcg ctaccgacgc
     9901 cgcatgaaat tcgcaaccac ctggacgatt acgttatcgg ccaggaacag gcgaaaaaag
     9961 tgctggcggt cgcggtatac aaccattaca aacgtctgcg caacggcgat accagcaatg
    10021 gtgtcgagtt gggcaaaagt aacattctgc tgatcggtcc gaccggttcc ggtaaaacgc
    10081 tgctggctga aacgctggcg cgcctgctgg atgttccgtt caccatggcc gacgcgacta
    10141 cactgaccga agccggttat gtgggtgaag acgttgaaaa catcattcag aagctgttgc
    10201 agaaatgcga ctacgatgtc cagaaagcac agcgtggtat tgtctacatc gatgaaatcg
    10261 acaagatttc tcgtaagtcg gacaacccgt ctattacccg tgacgtttcc ggtgaaggcg
    10321 tacagcaggc actgttgaaa ctgatcgaag gtactgttgc tgccgttcca ccgcagggcg
    10381 ggcgtaagca tccgcagcag gaatttttgc aggttgatac ctccaagatc ctgtttattt
    10441 gtggcggtgc gtttgccggt ctggataaag tgatttccca ccgtgtagaa accggctccg
    10501 gcattggttt tggcgcgacg gtaaaagcga agtccgacaa agcaagcgaa ggcgagctgc
    10561 tggcgcaggt tgaaccggaa gatctgatca agtttggtct tatccctgag tttattggtc
    10621 gtctgccggt tgtcgcaacg ttgaatgaac tgagcgaaga agctctgatt cagatcctca
    10681 aagagccgaa aaacgccctg accaagcagt atcaggcgct gtttaatctg gaaggcgtgg
    10741 atctggaatt ccgtgacgag gcgctggatg ctatcgctaa gaaagcgatg gcgcgtaaaa
    10801 ccggtgcccg tggcctgcgt tccatcgtag aagccgcact gctcgatacc atgtacgatc
    10861 tgccgtccat ggaagatgtc gaaaaagtgg ttatcgacga gtcggtaatt gatggtcaaa
    10921 gcaaaccgtt gctgatttat ggtaagccgg aagcgcaaca ggcatctggt gaataattaa
    10981 ccattcccat acaattagtt aaccaaaaag gggggatttt atctcccctt taatttttcc
    11041 tctattctcg gcgttgaatg tgggggaaac atccccatat actgacgtac atgttaatag
    11101 atggcgtgaa gcacagtcgt gtcatctgat tacctggcgg aaattaaact aagagagagc
    11161 tctatgaatc ctgagcgttc tgaacgcatt gaaatccccg tattgccgct gcgcgatgtg
    11221 gtggtttatc cgcacatggt cattccctta tttgtcgggc gggaaaaatc tatccgttgt
    11281 ctggaagcgg cgatggacca tgataaaaaa attatgctgg tcgcgcagaa agaagcttca
    11341 acggatgagc cgggtgtaaa cgatcttttc accgtcggga ccgtggcctc tatattgcag
    11401 atgctgaaac tgcctgacgg caccgtcaaa gtgctggtcg aggggttaca gcgcgcgcgt
    11461 atttctgcgc tctctgacaa tggcgaacac ttttctgcga aggcggagta tctggagtcg
    11521 ccgaccattg atgagcggga acaggaagtg ctggtgcgta ctgcaatcag ccagttcgaa
    11581 ggctacatca agctgaacaa aaaaatccca ccagaagtgc tgacgtcgct gaatagcatc
    11641 gacgatccgg cgcgtctggc ggataccatt gctgcacata tgccactgaa actggctgac
    11701 aaacagtccg ttctggagat gtccgacgtt aacgaacgtc tggaatatct gatggcaatg
    11761 atggaatcgg aaatcgatct gctgcaggtt gagaaacgca ttcgcaaccg cgttaaaaag
    11821 cagatggaga aatcccagcg tgagtactat ctgaacgagc aaatgaaagc tattcagaaa
    11881 gaactcggtg aaatggacga cgcgccggac gaaaacgaag ccctgaagcg caaaatcgac
    11941 gcggcgaaga tgccgaaaga ggcaaaagag aaagcggaag cagagttgca gaagctgaaa
    12001 atgatgtctc cgatgtcggc agaagcgacc gtagtgcgtg gttatatcga ctggatggta
    12061 caggtaccgt ggaatgcgcg cagcaaggtc aaaaaagacc tgcgtcaggc gcaggaaatc
    12121 cttgataccg accattatgg tctggagcgc gtgaaagatc gcatccttga gtaccttgcg
    12181 gttcaaagcc gtgtcaacaa aatcaaggga ccgatcctct gcctggtagg gccgccgggg
    12241 gtaggtaaaa cctctcttgg tcagtccatt gccaaagcca ccgggcgtaa atatgtccgt
    12301 atggcgctgg gcggcgtgcg tgatgaagcg gaaatccgtg gtcaccgccg tacttacatc
    12361 ggttctatgc cgggtaaact gatccagaaa atggcgaaag tgggcgtgaa aaacccgctg
    12421 ttcctgctcg atgagatcga caaaatgtct tctgacatgc gaggcgatcc ggcctctgca
    12481 ctgcttgaag tgctggatcc agagcagaac gtagcgttca gcgaccacta cctggaagtg
    12541 gattacgatc tcagcgacgt gatgtttgtc gcgacgtcga actccatgaa cattccggca
    12601 ccgctgctgg atcgtatgga agtgattcgc ctctccggtt ataccgaaga tgaaaaactg
    12661 aacatcgcca aacgtcacct gctgccgaag cagattgaac gtaatgcact gaaaaaaggt
    12721 gagctgaccg tcgacgatag cgccattatc ggcattattc gttactacac ccgtgaggcg
    12781 ggcgtgcgtg gtctggagcg tgaaatctcc aaactgtgcc gcaaagcggt taagcagtta
    12841 ctgctcgata agtcattaaa acatatcgaa attaacggcg ataacctgca tgactacctc
    12901 ggtgttcagc gtttcgacta tggtcgcgct gataacgaaa actgtgtcgg tcaggtaacc
    12961 ggtctggcgt ggacggaagt gggcggtgac ttgctgacca ttgaaaccgc atgtgttccg
    13021 ggtaaaggca aactgaccta taccggttcg ctcggcgaag tgatgcagga gtctattcag
    13081 gcggcgttaa cggtggttcg tgcgcgtgcg gaaaaactgg ggatcaaccc tgatttttac
    13141 gaaaaacgtg acatccacgt ccacgtaccg gaaggtgcga cgccgaaaga tggtccgagt
    13201 gccggtattg ctatgtgcac cgcgctggtt tcttgcctga ccggtaaccc ggttcgtgcc
    13261 gatgtggcaa tgaccggtga gatcactctg cgtggtcagg tactgccgat cggtggtttg
    13321 aaagaaaaac tcctggcagc gcatcgcggc gggattaaaa cagtgctaat tccgttcgaa
    13381 aataaacgcg atctggaaga gattcctgac aacgtaattg ccgatctgga cattcatcct
    13441 gtgaagcgca ttgaggaagt tctgactctg gcgctgcaaa atgaaccgtc tggcatgcag
    13501 gttgtgactg caaaatagtg acctcgcgca aaatgcacta ataaaaacag ggctggcagg
    13561 ctaattcggg cttgccagcc tttttttgtc tcgctaagtt agatggcgga tcgggcttgc
    13621 ccttattaag gggtgttgta aggggatggc tggcctgata taactgctgc gcgttcgtac
    13681 cttgaaggat tcaagtgcga tataaattat aaagaggaag agaagagtga ataaatctca
    13741 attgatcgac aagattgctg caggggctga tatctctaaa gctgcggctg gccgtgcgtt
    13801 agatgctatt attgcttccg taactgaatc tctgaaagaa ggggatgatg tagcactggt
    13861 aggttttggt acttttgccg ttaaagagcg tgctgcccgt actggccgca acccgcagac
    13921 cggtaaagag atcaccatcg ctgctgctaa agtaccgagc ttccgtgcag gtaaagcact
    13981 gaaagacgcg gtaaactaag cgttgtcccc ggtggggatg tgacgaagtt caagggcgca
    14041 tctactgatg tgcctttttt atttgtattc ggtgactttc tgcgtcttgt gggctgacaa
    14101 ttgcccccgt ttcttgtcac aataggcctt tgcgcgcatc gatacgttgc gtgaggtaca
    14161 cagtcatcta cagcggagtg ttgttacacc atgatggaca gcttacgcac ggctgcaaac
    14221 agtctcgtgc tcaagattat tttcggtatc attatcgtgt cgttcatatt gaccggcgtg
    14281 agtggttacc tgattggcgg aggcaataac tacgccgcaa aagtgaatga ccaggaaatc
    14341 agccgtgggc agttcgagaa cgcctttaac agcgagcgta atcgcatgca gcaacagctg
    14401 ggcgatcaat actccgagct ggcagcgaat gaaggctata tgaaaaccct gcgtcaacag
    14461 gtgctgaatc gtctgatcga cgaggcgctg ttggatcagt acgctcgtga gctgaaactg
    14521 ggtatcagtg atgagcaggt taaacaggcg attttcgcga ccccagcctt ccaggttgac
    14581 ggcaaatttg ataacagccg ctataacggt atcctcaacc agatggggat gaccgccgat
    14641 cagtacgccc aggcgctgcg taaccagctc actacccaac agctgattaa cggtgttgcc
    14701 ggtaccgatt ttatgctgaa aggtgaaacc gacgagctgg cggcactggt cgcgcaacaa
    14761 cgcgtggtgc gtgaggcgac tatcgatgtt aacgcgctgg cggcgaagca gcctgtgacc
    14821 gaacaggaga ttgccagcta ctacgaacaa aacaaaaaca atttcatgac gccggaacaa
    14881 ttccgcgtga gttacatcaa gctggatgcc gcaacgatgc agcaaccggt tagcgatgcg
    14941 gatatccaga gctactacga tcagcatcag gatcaattca cccagccgca gcgtacccgc
    15001 tacagcatca tccagaccaa aactgaagat gaagcgaaag cggtacttga tgagctgaat
    15061 aaaggcggtg attttgctgc attagccaaa gaaaaatctg ccgatattat ctctgcccgt
    15121 aacggcggcg atatgggttg gttagaagat gccactatcc ccgacgaact gaaaaatgct
    15181 ggtctgaaag aaaaaggcca actgtctggt gtcatcaaat cttcggtcgg tttcctgatt
    15241 gtacgtctgg acgacattca gccagcgaaa gtgaaatcgt tagacgaagt acgtgacgac
    15301 attgcggcga aagtgaaaca cgaaaaagcc ctcgatgcgt actatgcgct gcagcagaaa
    15361 gtgagcgatg cggcaagcaa cgacaccgag tctctggccg gtgcagagca agctgccggc
    15421 gttaaagcca ctcagacggg ttggttcagc aaagataacc tgccggaaga gttgaacttc
    15481 aagccggttg ccgacgctat ctttaacggc ggtctggtag gtgaaaacgg cgcgccgggc
    15541 atcaactctg acatcatcac cgtagacggc gaccgtgcat tcgtgctgcg catcagcgag
    15601 cacaaaccgg aagcggtgaa accgttggca gatgttcagg aacaagttaa ggcactggtt
    15661 cagcacaaca aagctgaaca acaggcgaaa gtggatgctg agaaactgct ggttgatttg
    15721 aaagccggca aaggtgcgga agctatgcag gctgccggtc tgaaatttgg cgagccgaaa
    15781 accttaagcc gttccggtcg tgacccgatt agccaggcgg cgtttgcact gccactgcca
    15841 gcgaaagaca aaccgagcta cggtatggcg accgatatgc aaggtaatgt ggttctgctg
    15901 gcgctggatg aagtgaaaca aggttcaatg ccggaagatc agaaaaaagc gatggtgcag
    15961 ggtatcaccc agaacaacgc acaaatcgtc tttgaagctc tgatgagtaa cctgcgtaaa
    16021 gaggcgaaaa tcaaaattgg cgatgcgctg gaacagcaat aatcctgaag ccgcctcgca
    16081 aaaaaatgcg ttgcagctgt aacaagaaaa ggtcgctttc gcggcctttt ccatttctga
    16141 acattgccat ttgtttactg ttttcactgc cgttaaggtg attccactgt taacaaacaa
    16201 ggagaaaaca gtatgaaaca cggaattaaa gcactgctca ttaccctgtc cctggcctgt
    16261 gccggaatgt ctcatagcgc gctggcggca gcttctgtgg cgaaaccgac ggcggtagaa
    16321 accaaagcgg aagctcctgc agcacaaagt aaagcagcag taccggcgaa agccagtgac
    16381 gaagaaggca cccgggtcag cattaataat gccagcgcgg aagagctagc ccgcgcgatg
    16441 aatggcgttg gcctgaagaa agcgcaggcg attgtcagtt atcgcgaaga gtacggtccg
    16501 tttaaaacag tggaggatct aaagcaggtg ccggggatgg gcaattcgct ggtggaacgt
    16561 aatctggcgg tattaaccct gtaattaatt tgcatagtgg caattttttg ccagactgaa
    16621 gaggtcatac cagttatgac ctctgtactt ataacaacaa cgtaaggtta ttgcgctatg
    16681 caaacacaaa taaaagttcg tggatatcat ctcgacgttt accagcacgt caacaacgcc
    16741 cgctaccttg aatttctcga agaagcccgc tgggatgggt tggaaaatag cgacagtttt
    16801 cagtggatga cggcccataa catcgccttc gtcgtggtca atatcaatat taactatcgt
    16861 cgcccagcgg tattaagtga cctgttaact attaccagtc agttgcagca attaaacggt
    16921 aaaagcggca tcttaagcca ggtcattaca ctggagccgg aagggcaggt ggtagcggat
    16981 gcgcttatta cgtttgtttg tattgatctt aaaacgcaga aagcattagc tctggaaggg
    17041 gaattgcgcg aaaagctgga gcagatggtt aagtaaacgt tttgtggtgc cggatgctca
    17101 agccgcatcc ggcgacaccc ggaataatta cctcaacccg gttttctgct tcatcgctgc
    17161 catcaccgtc ggtttatcgg ccagataatg attcaaaccg ttggcgcgta aattacatgc
    17221 cgcacaatga ccgcaaccgt cgcctttaat gccgttatag caggtcaacg tttcgttacg
    17281 gactaaatcc agtttgccgt aataatctgc cagcgcccag gtttccgctt tatcaatcca
    17341 catcagcggc gtttcaaaac gaatatcttt cgccatgccc aaactgacgg catggtttag
    17401 tgctttcaca aactcatcgc ggcaatccgg gtagccggag aaatccgttt cacagacgcc
    17461 ggtaattacg gcttctgctt ttacctgata cgcatatatt gccgccagcg tcaggaacaa
    17521 aatattacgc cctgggacaa acgtattcgg gatgccatcg gcttcaggtt cataatcagg
    17581 caccggaatg ctgtcacgtg tcaggctgct gaccgccagc tcgttgagca gcgttacatc
    17641 aagaacctta tgcgcgcgtg ctcccagttt cagcgccagt tcgcgtgcca cgtcgatttc
    17701 tgcgcgatgt cgctgaccgt aatcgaacgt cacgcaatgg acttcatcat attgttgtaa
    17761 tgcctgcacc agacaggtgg tggaatcctg gcctccactg aacacaacga cagcacgttt
    17821 catagataat cctgcttgaa caataaaagc gttatggtaa cgcctgcgat taacccggac
    17881 cagctattca ttgcgacggc gcgggaagcc aggcttcggt aaattcaaac cagccgcgcg
    17941 gtgtcagtcg cacaccgttc acgccgggag gggcactaat gcgatagtga tagttgaaca
    18001 gcggcgtcag cgtcgcgtct gccattaact ggctaaaaac cgctttcagg gcattaaatc
    18061 ggttttcctc atcaggcatt acttgcaccg cgtccagcgt cgattgcaga tgtgcatatg
    18121 ctggagcgtc gaaaacatgt ggccatagtg gatcgcaacg tagccattgc tccagagtat
    18181 attccggtgc ttcgccaatt aatctgtcgc ccatcatgag gtctgcgtgt gccagtaggg
    18241 tcgtgtcgtc ccagtttttt gcgttatgaa aaataattgt gagttcacag ccttccgctg
    18301 ccagtgtcgc ctgtaggcgt tctgccatgg tatgaagttc tatcggtagg tgataaacca
    18361 gcgtcaaggt tttcggtagt ttgacttcat ccggtacttg ccagtgcgga atagtccagc
    18421 ctggcagtaa tgcatgactg gcggtgatca ggttttctcc gacttctaac gtttgtaata
    18481 aaccggattg atgaataatg gagatcactt ttcgcgcctg ccagagggag agtcggggac
    18541 ttttgcgcaa cgttaaatag caaaaaccta aactgatgcc actactgacc tggctgaccc
    18601 gttgcagctc ctccggtttg ccgatggtga tttgcacggg atgccgacaa ctggttccca
    18661 aatctttttc gaaaagcggc ggagttatcc agtactcaac cgctttaagc agcggatgac
    18721 gcaaatggta ataatcatgg ctctccaggc gcaccagctc cgctgtgaat tgtgttaagc
    18781 gaaaaggacc agtgccgatc agtgggaatt gcggatgcgc cagatggctg caatagctcg
    18841 ccagccggtg cgcaagccag taatcggggc gatgtaaaaa gaaggtcaga cactgcggat
    18901 gggtgacttc aatacgcttc acgctaataa ataattgatc cagtgctggc agttgtaaca
    18961 gcatcaataa tcgctggtgt aagtgtgagg cttttactgc atcgccgtta tgccagtgta
    19021 gggttgaacg aagataaaag tcccagcgta acccgtcagt agaggtttcc cagtgatgcg
    19081 ctaaatcgcc aatcgggcgc tgagtattat tatcgaagcg ggtcaggccg gaaaatatct
    19141 gcccggcgag atgctgctcg gcacggccgg gcaaaaagcc tggttgtagc ggttcgagcg
    19201 ggcgatagta gggaatacgc aacgtgggtg tatcgttttg ccattgtccg cccataaacg
    19261 gctgtaacag agtgcgtagc tcacctaggg ccagttgcgc cagctccagc acatcttgct
    19321 gctttccggt ttccagtgcc tgttccatca tcgcattgcg tagcgattcc ggcgtgacca
    19381 gaaagcgtaa ttgtccgcgc tttccgcgtc ctgactgcgc ctgccactcc agccatcccg
    19441 cctcctgtgc ctgacgcaac agcgtacgaa catggcgttc gctgcaaaaa cagcgttcgg
    19501 ccagttcgct gacggtgacg gtttgcggct ttccggctga aggttgccac agacgttgat
    19561 actggttaag acggttgagc aatcgcatat aaacccggaa caatattatt taactattca
    19621 ctattacttc cgtatatatc aggtgatact caatctccat taaccgtgtc acagagtgga
    19681 gaaagaaatg gctcgtctgg cagcatttga tatggatggc actttattga tgcctgacca
    19741 tcatttaggt gagaaaaccc tctctacttt ggcgcgactg cgtgaacgcg acattaccct
    19801 cacttttgcc acggggcgtc atgcgctgga gatgcagcat attctcgggg cgctatcgct
    19861 ggatgcatat ttgattaccg gcaacggaac gcgcgtgcat tctctggaag gtgaactttt
    19921 acatcgtgat gatttacctg cggatgtcgc ggagctggtg ctgtatcagc aatgggatac
    19981 ccgagccagc atgcatatct tcaatgacga cggttggttt accgggaaag agatccctgc
    20041 gttgttgcag gcatttgtct atagcggttt tcgttatcag ataatcgatg tcaaaaaaat
    20101 gccactcggc agcgtcacca agatctgctt ctgtggcgat cacgacgatc ttacacgctt
    20161 gcagatccag ctatacgaag cattaggcga gcgtgcacat ttgtgttttt ccgccacgga
    20221 ttgcctcgaa gtgctgccgg tgggctgcaa taaaggcgct gcattgacgg tgctgaccca
    20281 acatctaggt ttatcgttgc gcgattgcat ggcctttggt gatgcgatga acgatcgcga
    20341 aatgttaggc agcgtcggta gcgggtttat tatgggcaat gcgatgccgc aactgcgcgc
    20401 ggagctcccg catttaccgg tgattggaca ttgccgaaat taggctgtct ctcactattt
    20461 gacgcactga ctggactatc cacatctacc ttattccccc gaataatgag atcccttcca
    20521 gcaccgggca attgcccggt tttttttgcg ttgaatttgt cattttgtgc cgtggtgttt
    20581 aaaccgcaca gaataaattg tcgtgatttc acctttaaaa tagaattaaa agagaaaaaa
    20641 attctctgtg gaagggctat gttagataaa attgaccgta agctgctggc cttactgcag
    20701 caggattgca ccctctcttt gcaggcactg gctgaagccg ttaatctgac aaccacccct
    20761 tgctggaagc gcctgaaacg gctggaggac gacggtatcc ttatcggcaa agtcgccctg
    20821 ctggatccgg aaaaaatagg cctcggcctg accgcctttg tgctgataaa aacgcaacat
    20881 cacagtagcg aatggtattg ccgctttgtc acggtggtta ccgaaatgcc agaagtgctg
    20941 gggttctggc gcatggctgg tgaatacgat tatctgatgc gcgtccaggt tgccgacatg
    21001 aaacgctacg acgagtttta taagcgtctg gtaaacagcg tgccggggct gtcggacgtc
    21061 acttccagct tcgcgatgga acagattaaa tacaccactt ctttacccat cgaataaata
    21121 tccagaatca ggtcaggaca caacgcgtgc gattatttgc tcaattaagc tggtatttcc
    21181 gtcgggaatg gcgtcgctat ctcggggctg tcgccttgct tgtcattatc gcgatgctgc
    21241 aactggttcc gccaaaagtg gttggtattg ttgtcgatgg cgtgacagaa caacacttta
    21301 ctaccgggca gatcctgatg tggatcgcca ccatggtgct gattgccgtt gtggtttatt
    21361 tcctgcgtta cgtctggcgg gtattgctgt ttggtgcgtc ttatcaactg gctgttgaac
    21421 tgcgtgaaga ttattaccgt cagctaagcc ggcagcatcc tgagttttac ctgcgtcatc
    21481 gcacgggtga cctcatggct cgtgcgacca atgacgtcga tcgcgtcgtg tttgcagccg
    21541 gagaaggggt gctgacgctg gtggattcac tggtgatggg ctgcgctgtg ttgattatga
    21601 tgtctacgca aattagctgg cagttgacct tatttgccct gttgccgatg ccagtgatgg
    21661 cgatcatgat caagcgcaac ggcgatgcct tgcatgaacg ctttaagctg gcacaggcgg
    21721 cgttttctag tcttaatgac cgcacccagg aaagcctcac cagtatccgc atgatcaaag
    21781 cctttggtct ggaagatcgc cagtcggcgt tatttgccgc ggatgccgaa gataccggca
    21841 aaaaaaacat gcgggtggcg cgtattgatg ctcgtttcga cccgaccatc tatatcgcga
    21901 ttggtatggc gaatttgctg gcgattggcg gcggtagttg gatggtggtg cagggcagtt
    21961 taacgctggg ccagctcacc agttttatga tgtatttagg tctgatgatt tggccaatgc
    22021 tggcgctggc atggatgttt aacattgtgg aacgtggtag tgctgcatac agccgtattc
    22081 gcgcgatgct ggcggaagcg ccggtggtga acgatggtag cgaacccgtg ccggaagggc
    22141 gtggcgaact ggatgtaaat attcaccagt tcacgtatcc gcagactgac catcctgcgc
    22201 tggaaaacgt caatttcgcc ctgaaacccg gtcagatgct gggtatctgc gggccgactg
    22261 gttccggcaa aagtaccctg ttgtcgctca ttcagcgtca tttcgacgtc agcgaggggg
    22321 atattcgctt tcatgatatt cctctgacga agttacaact cgatagctgg cgtagccgcc
    22381 tggcggtagt tagccagaca ccgttccttt tttccgacac cgtagcgaac aacatcgcgt
    22441 tgggttgccc gaatgccacc cagcaagaga ttgagcatgt cgcgcggtta gccagcgtac
    22501 atgacgatat tttgcgtcta ccgcaaggtt acgatacaga agtgggcgag cgcggcgtga
    22561 tgctttccgg tgggcaaaaa cagcgtatct ccattgctcg agcgttatta gtcaacgcgg
    22621 aaatcctcat ccttgatgat gcgctttcgg cggtggacgg acgcacagag caccagatcc
    22681 tgcataacct gcgtcagtgg ggacagggaa gaacggtaat catcagtgcc catcgccttt
    22741 cggcactgac ggaagccagt gaaaatattg tgatgcagca cggacatatc gcccagcgtg
    22801 gcaatcatga tgagctggcg caacaaagcg gctggtatcg cgatatgtat cgctatcaac
    22861 aactggaggc ggcgctcgac gacgctccgg aaattcgcga ggaggccgtc gatgcgtagt
    22921 tttagccaac tgtggccgac tctcaagcgt ctgttagcgt acggttcgcc gtggcgtaaa
    22981 ccgctgggga ttgcggtcct gatgatgtgg gttgcggcag cggcagaagt cagtgggccg
    23041 ctgcttatca gctattttat cgacaatatg gtagcgaaaa ataacctgcc gttgaaaatg
    23101 gttgcagggc tggctgcggc gtatgttggg ctacaactgt ttgccgccgg gctacattac
    23161 gcgcagtcgc tgctgtttaa tcgggcggca gtaggcgtag tgcaacagtt gcgtaccgac
    23221 gtgatggatg ccgcattgcg ccagccatta agcgagtttg atacccaacc cgtcgggcag
    23281 gtgatttccc gcgtcactaa tgacactgaa gtgatccgcg atctctacgt taccgtagtg
    23341 gcaactgtcc tgcgtagcgc cgcactggtg ggcgcgatgc tggtggcgat gttcagcctc
    23401 gactggcgaa tggcgctggt ggcgataatg attttcccgg tggtgctggt ggtaatggtg
    23461 atataccagc gttacagcac gccgattgtc cgtcgtgtgc gcgcctatct ggcggatatc
    23521 aacgacggct ttaacgaaat catcaatggc atgagcgtta tccagcagtt ccgtcagcag
    23581 gcgcgatttg gcgaacgtat gggggaggcc agtcgttcac actatatggc caggatgcaa
    23641 accctgcgcc tcgacggttt tctgctgcgt ccgctgctga gtctgttttc atcgctcatt
    23701 ctttgtggct tgttgatgct gtttggcttc tccgctagcg gcaccattga agtaggcgtg
    23761 ctgtatgcgt ttatcagcta tcttgggcga cttaacgaac ccttaatcga actgaccacg
    23821 caacaggcga tgctgcaaca ggctgttgtt gctggtgagc gcgtgtttga actgatggac
    23881 ggaccgcgcc agcaatatgg caatgatgat cgcccgttac agagtggcac catcgaagtc
    23941 gataacgtgt catttgctta tcgcgatgac aatctggtgc taaagaacat taatctctct
    24001 gtgccttcgc gtaactttgt ggcactggtc gggcataccg gcagtggcaa aagcaccctc
    24061 gccagtttat tgatgggcta ttacccgcta acggaaggtg agattcgcct tgatggtcgt
    24121 ccattaagtt cgctaagtca cagcgcgctg cgccagggcg tggcaatggt gcagcaagat
    24181 ccggtggtgc tggcggatac cttcctcgcc aacgtgacgc tggggcgtga tatctccgaa
    24241 gaacgcgtct ggcaggcgct ggaaaccgtg caactggcgg agctggcgcg cagcatgagt
    24301 gatggtattt atacgccgct gggcgagcag gggaataatc tctccgtcgg gcaaaagcaa
    24361 ctgctggcac tggcacgcgt gttggtggag acgccgcaaa tcctgatcct tgatgaggca
    24421 accgccagca ttgactccgg tactgaacag gcgattcaac atgctctggc ggctgtgcgt
    24481 gaacatacca cgctggtggt gattgctcac cgcttatcga ccattgttga tgccgacacc
    24541 attctggtgc ttcatcgtgg gcaagccgtg gagcagggca ctcaccagca actgctggcg
    24601 gcccagggac gctactggca gatgtatcaa ctgcaacttg cgggcgaaga gctggcagcc
    24661 agcgtgcgtg aagaagaatc attgagcgcc tgaatagcgc aatatttcat cgttggtgca
    24721 aaaatgtaac gcactgtgca ctgtcatagt gcgttttcat tttcaatctt cttaacttcc
    24781 tgctctcttt ctcgtttttc atttctggca caccgcttgc aataccttct tcgtgtagca
    24841 gaaccattac cgaattctga ctggagggga tctatgaagc tggtgaccgt gataatcaaa
    24901 ccattcaagc tggaagacgt tcgtgaagcg ttatcttcca ttggtattca gggcctgacc
    24961 gtcaccgaag tgaaaggttt cgggcgtcag aaagggcatg ccgagctgta ccggggggcg
    25021 gaatacagcg tcaacttcct gccaaaagta aaaattgatg tggcaattgc tgatgaccaa
    25081 ctcgatgaag tgatcgatat cgtcagtaag gcggcttaca ccggaaaaat tggcgacggc
    25141 aaaatcttcg tcgctgaatt gcaacgcgtc attcgtattc gtaccggcga agccgacgaa
    25201 gcggcgctgt aatctctggc acacagcaac aggaacgaaa aatgaagata gcgacgataa
    25261 aaactgggct tgcttcactg gcgatgctgc cgggactggt aatggctgca cctgcggtgg
    25321 ccgataaagc cgacaatgcg tttatgatga tttgtactgc gctggtgctg tttatgacta
    25381 ttccggggat tgccctgttt tacggtgggt tgattcgcgg caaaaacgtg ctgtcgatgc
    25441 tgatgcaggt gacggtgacg tttgcactgg tctgtattct ctgggtggtt tacggttact
    25501 cgctggcgtt tggtgagggt aacaacttct tcggcaacgt taactggttg atgctgaaaa
    25561 acatcgaact gacggcggtg atgggcagca tttatcagta tatccacgta gcgtttcagg
    25621 gatcgtttgc ctgcattacc gtaggcttga tagttggggc gctggcggaa cgaatccgct
    25681 tctcagctgt gttgattttc gtggtggtat ggctgacgct ctcttacatt ccgattgcgc
    25741 atatggtgtg gggcggcggt ttgctggctt ctcacggtgc actggatttc gcgggtggca
    25801 cagtggtgca cattaacgcc gcaatcgccg gtctggtggg cgcgtatctg ataggcaaac
    25861 gcgtgggctt cggtaaagag gcgtttaaac cgcacaacct gccgatggtc ttcaccggga
    25921 ctgccattct ctatatcggt tggtttggct ttaacgccgg gtcagcgggc acggcgaatg
    25981 aaatcgcggc actggcattt gtgaatactg tggtcgcaac ggcggcggca attcttggct
    26041 ggatcttcgg tgaatgggcg ctgcgtggta agccttcact gctgggggcg tgttctggcg
    26101 cgattgccgg tctggtcggc gtgacgccag cgtgcggcta cattggggtt ggcggcgcgt
    26161 tgattatcgg cgtggtagct ggtctggcgg gcttgtgggg cgttaccatg ctcaaacgct
    26221 tgctgcgggt ggatgatccc tgcgatgtct tcggtgtgca cggcgtttgt ggcattgtcg
    26281 gctgtatcat gaccgggatt tttgccgcca gctcgctggg cggcgtgggc ttcgctgaag
    26341 gtgtgacgat gggtcatcag ttgctggtac agctggaaag catcgccatt acgatcgtct
    26401 ggtccggtgt ggtggcattt attggctaca aattggcgga tctgacggtt ggtctgcgtg
    26461 taccggaaga gcaggagcta gaagggctgg atgtcaacag tcacggcgag aatgcctata
    26521 acgcgtaaca agcactgcaa aaaacagccg gacggttttc acctccggct atttttttaa
    26581 ttgtgattac gcatcacccc ttcctgaacg gtcgaggcaa ccagtacgcc gtcctgggta
    26641 taaaactcac cgcgcacaaa gccacgtgcg ctggacgccg aggtgctctc cacgctatac
    26701 agcagccatt cattcaaatt aaacgggcga tggaaccaca tggaatggtc aatggtggca
    26761 atctgaatcc ccggttcgag aaaaccgatg ccgtgcggct gtagagctac cggcaggaag
    26821 ttaagatcag aagcgtaacc gagcagatac tgatgaacgc gcaggtcatc cggcacgcta
    26881 ccatttgcgc ggatccacac ctgacgatgt ggttctgcga cgtgaccttt cagtgggtta
    26941 tgaaactcca ccggacggac ttccagcgga cgatcgcaga tgaatttatc tttaagcact
    27001 ggcggcagca ggtgcgccag cgattgggcg atttgcgttt ccgaaggcag gccatcaggc
    27061 gctggcgcgg acggcattgt tttttgatgt tcgaaacccg cttctggtgc ctggaaagag
    27121 gccgtcatat aaaaaatcgg tttgccgttt tgaatagcag caacccggcg ggcgctgaag
    27181 ctgttaccat cacgcagcgt ttcgacatca taaataatcg gtttcttact atcgcctggg
    27241 cgaagaaagt agctgtgaaa cgaatgtacc agccgctctt ccgggacggt ctcttttgca
    27301 gcatacaagg cctgacccac gacctggccg ccaaacacct ggcgtaaacc taaatcttca
    27361 ctctggccgc gaaagagtcc tgcctcaatt ttttccagat ttaacaatgc cagtaaattt
    27421 tttagcgcct gactcatata actctccagt aacaaagctg ccgcagcaag ccaaagtgag
    27481 ttgagtataa cgcaaatttg ccactggtcc gatgggtgca ataatctgaa ttacgggcta
    27541 attacaggca gaaatgcgtg atgtgtgcca cacttattga cgttactatt ttgttaacca
    27601 ctcttccggc gaggaaagtt agcccgctgg tgcattgata ataaggagaa atgaatgaaa
    27661 ctcgtgcaca tggccagtgg tttagcggtt gcgattgcgt tggcggcttg cgcagataaa
    27721 agcgcggata ttcagacgcc agccccggct gcaaatacgt ctatttcagc aacacaacaa
    27781 cctgctatcc agcaaccgaa tgtctccggt accgtctgga tccggcagaa agtcgcactg
    27841 ccgcctgatg ctgtgctgac cgtgacactt tctgacgcgt cgttagccga tgcaccgtca
    27901 aaagtgctgg cgcagaaagc ggtgcgtacc gaaggtaaac agtcaccatt cagctttgtt
    27961 ctgccattta acccggcaga tgttcagccg aacgcgcgta ttctgttgag tgcggcgatt
    28021 accgtgaatg acaaactggt atttattacc gataccgttc agccggtgat caacaagggc
    28081 ggaactaaag ccgacctgac attggtgccg gtgcagcaaa ccgccgtgcc ggttcaggcc
    28141 agcggtggtg caacgactac cgtaccttcg acttcaccaa ctcaggtgaa tccgtcttcg
    28201 gcagttccag ctcctacgca atattaagcg acgttaaccc tctccgcc
//
LOCUS       DADMIB010000037        28223 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.037, whole genome shotgun sequence.
ACCESSION   DADMIB010000037 DADMIB010000000
VERSION     DADMIB010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 28223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28223
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.037"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..777)
                     /locus_tag="JNZ89_001541"
                     /pseudo
     CDS             complement(1..777)
                     /locus_tag="JNZ89_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(955..1866)
                     /gene="gsiD"
                     /locus_tag="JNZ89_001542"
     CDS             complement(955..1866)
                     /gene="gsiD"
                     /locus_tag="JNZ89_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001236035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiD"
                     /protein_id="HAY8935456.1"
                     /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA
                     LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
                     ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
                     GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGT
                     VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA
                     LAIFLTVLAFNLLGDGLRDALDPKIKG"
     gene            complement(1869..2789)
                     /gene="gsiC"
                     /locus_tag="JNZ89_001543"
     CDS             complement(1869..2789)
                     /gene="gsiC"
                     /locus_tag="JNZ89_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiC"
                     /protein_id="HAY8935457.1"
                     /translation="MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD
                     AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT
                     ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELG
                     WLPTVGADSWQHYILSSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV
                     VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA
                     EILLFSLEFILINLVVDVLYAAINPAIRYK"
     gene            complement(2807..4345)
                     /gene="gsiB"
                     /locus_tag="JNZ89_001544"
     CDS             complement(2807..4345)
                     /gene="gsiB"
                     /locus_tag="JNZ89_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter substrate-binding
                     protein GsiB"
                     /protein_id="HAY8935458.1"
                     /translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY
                     DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGT
                     DFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILVH
                     PATAMISPAALEKYGKEIGFHPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI
                     TWRPVADNNTRAAMLQTGEAQFAFPIPYEQAALLEKNKNIELMASPSIMQRYISMNVT
                     QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA
                     RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV
                     EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ
                     ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED
                     ADLQ"
     gene            complement(4365..6236)
                     /gene="gsiA"
                     /locus_tag="JNZ89_001545"
     CDS             complement(4365..6236)
                     /gene="gsiA"
                     /locus_tag="JNZ89_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter ATP-binding protein
                     GsiA"
                     /protein_id="HAY8935459.1"
                     /translation="MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGET
                     LAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVR
                     GADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT
                     ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM
                     SMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLG
                     AMKGLDYPRRFPLISLEHPAKQEPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVT
                     REVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS
                     PGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLCVHGLLPGKDAAARVAWLLERV
                     GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD
                     LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAA
                     VPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR"
     gene            complement(6223..7188)
                     /gene="iaaA"
                     /locus_tag="JNZ89_001546"
     CDS             complement(6223..7188)
                     /gene="iaaA"
                     /locus_tag="JNZ89_001546"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HAY8935460.1"
                     /translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE
                     AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSH
                     LRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPAIFSTPLRYEQLLAARKEG
                     ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC
                     YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG
                     LIAIGHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ"
     gene            7392..8627
                     /gene="moeA"
                     /locus_tag="JNZ89_001547"
     CDS             7392..8627
                     /gene="moeA"
                     /locus_tag="JNZ89_001547"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HAY8935461.1"
                     /translation="MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDV
                     VSQLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA
                     PVPEGCEAVVMQEQTEQTDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE
                     LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC
                     EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL
                     AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR
                     TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN
                     VDVGEWVEVEPFNALFGGL"
     gene            8627..9376
                     /gene="moeB"
                     /locus_tag="JNZ89_001548"
     CDS             8627..9376
                     /gene="moeB"
                     /locus_tag="JNZ89_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HAY8935462.1"
                     /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGC
                     AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHNDATVGQPKVESARDALTRINPHIA
                     ITPVNALLDDAELAALIAEYDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ
                     ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKP
                     ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
     gene            complement(9452..10114)
                     /gene="fsa"
                     /locus_tag="JNZ89_001549"
     CDS             complement(9452..10114)
                     /gene="fsa"
                     /locus_tag="JNZ89_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HAY8935463.1"
                     /translation="MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLP
                     QLHEAMGGQGRLFAQVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAE
                     GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA
                     KVLAASFKNPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWLGAFGRT
                     SI"
     gene            10245..11144
                     /locus_tag="JNZ89_001550"
     CDS             10245..11144
                     /locus_tag="JNZ89_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415345.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HAY8935464.1"
                     /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL
                     LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE
                     VKSVEEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPEIATALLQACHEAGIHTAVETC
                     LHVPWKYITPSLPYIDLFLADLKHIADAPFKQWTDGNAAKVLDNLKKLAAAGKKIIIR
                     VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD
                     APDLLDFAQQYACQKGLTATLRG"
     gene            11150..13582
                     /locus_tag="JNZ89_001551"
     CDS             11150..13582
                     /locus_tag="JNZ89_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HAY8935465.1"
                     /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL
                     DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL
                     ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
                     SGDAHLAVNFPLLLEKGLDGLREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE
                     HIERFAALAREMAATETRESRRDELLAIAENCDLIAHQPPQTFWQALQLCYFIQLILQ
                     IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHSCWLKLLEVNKIRSGSH
                     SKASAGSPLYQNVTIGGQTLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
                     SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
                     GYRCTGMSFINFARVMLAALEGGRDATSGNVFLPQEKALSAGNFNNFDEVMDAWDTQI
                     RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
                     ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT
                     VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK
                     AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK
                     LMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDA
                     QDDIIARTEHML"
     gene            13728..14543
                     /gene="ybiV"
                     /locus_tag="JNZ89_001552"
     CDS             13728..14543
                     /gene="ybiV"
                     /locus_tag="JNZ89_001552"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase YbiV"
                     /protein_id="HAY8935466.1"
                     /translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIEFVVAS
                     GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
                     NFVACGLQSAYVSENAPEAFVALMAKHYHRLKAVKDYQEIDDVLFKFSLNLPDEQIPL
                     VIDKLHIAFDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN
                     DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS"
     gene            14695..15960
                     /locus_tag="JNZ89_001553"
     CDS             14695..15960
                     /locus_tag="JNZ89_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1479 domain-containing protein"
                     /protein_id="HAY8935467.1"
                     /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA
                     TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFSREQALGW
                     DQSMLDYLDRNRFDEVYKGPGDNFFGTLSTSRPEIYPIYWSQTQMQARQSEEMANAQS
                     FLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
                     RVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
                     HVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG
                     DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP
                     HEDYETNWEGRFTLADLNIHGKRALGMDV"
     gene            complement(16201..17793)
                     /locus_tag="JNZ89_001554"
     CDS             complement(16201..17793)
                     /locus_tag="JNZ89_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HAY8935468.1"
                     /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
                     KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI
                     YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
                     KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
                     CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA
                     SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL
                     FKNLNLLLEVGEKLAVLGTNGVGKSTLMKTLVGDLQPDSGTVKWSENARIGYYAQDHE
                     YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
                     KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI
                     TPERVIDFSGNYEDYLRSKGIE"
     gene            18012..18932
                     /gene="ldtB"
                     /locus_tag="JNZ89_001555"
     CDS             18012..18932
                     /gene="ldtB"
                     /locus_tag="JNZ89_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY8935469.1"
                     /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT
                     IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV
                     INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
                     YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI
                     KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS
                     VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN"
     gene            complement(18991..20109)
                     /locus_tag="JNZ89_001556"
     CDS             complement(18991..20109)
                     /locus_tag="JNZ89_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion transporter"
                     /protein_id="HAY8935470.1"
                     /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT
                     IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL
                     FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI
                     AQMAPLAGAMMLTLLLLCWCCFPGKVLQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE
                     FKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS
                     HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLAWAVNVGGFGLLPGSLASLIA
                     LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILPAN"
     gene            complement(20106..20573)
                     /locus_tag="JNZ89_001557"
     CDS             complement(20106..20573)
                     /locus_tag="JNZ89_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MntR"
                     /protein_id="HAY8935471.1"
                     /translation="MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
                     ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA
                     QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK"
     gene            20759..20887
                     /gene="mntS"
                     /locus_tag="JNZ89_001558"
     CDS             20759..20887
                     /gene="mntS"
                     /locus_tag="JNZ89_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganase accumulation protein MntS"
                     /protein_id="HAY8935472.1"
                     /translation="MNEFKRCMRVFSHSPFKVRLILLSMLCDMVNNKPQQDKPSDK"
     gene            21159..22742
                     /locus_tag="JNZ89_001559"
     CDS             21159..22742
                     /locus_tag="JNZ89_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HAY8935473.1"
                     /translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA
                     AFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST
                     EILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
                     LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT
                     YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD
                     GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK
                     NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY
                     TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP
                     FMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNF
                     QLQKVDYNHLGTDIFDPKP"
     gene            complement(22791..23306)
                     /gene="ompX"
                     /locus_tag="JNZ89_001560"
     CDS             complement(22791..23306)
                     /gene="ompX"
                     /locus_tag="JNZ89_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpX"
                     /protein_id="HAY8935474.1"
                     /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM
                     GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI
                     YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
                     GTWIAGVGYRF"
     gene            complement(23359..23424)
                     /locus_tag="JNZ89_001561"
     CDS             complement(23359..23424)
                     /locus_tag="JNZ89_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935475.1"
                     /translation="METFCYMKWPVRHHKSRRVSH"
     gene            23659..24546
                     /gene="rhtA"
                     /locus_tag="JNZ89_001562"
     CDS             23659..24546
                     /gene="rhtA"
                     /locus_tag="JNZ89_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/homoserine exporter RhtA"
                     /protein_id="HAY8935476.1"
                     /translation="MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVT
                     ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA
                     LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW
                     AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILS
                     TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS
                     MGSTLTVRKESKIKELDIN"
     gene            24845..25348
                     /gene="dps"
                     /locus_tag="JNZ89_001563"
                     /gene_synonym="pexB"
     CDS             24845..25348
                     /gene="dps"
                     /locus_tag="JNZ89_001563"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001730644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HAY8935477.1"
                     /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS
                     LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT
                     PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW
                     FIESNIE"
     gene            25752..26498
                     /gene="glnH"
                     /locus_tag="JNZ89_001564"
     CDS             25752..26498
                     /gene="glnH"
                     /locus_tag="JNZ89_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter substrate-binding
                     protein GlnH"
                     /protein_id="HAY8935478.1"
                     /translation="MKSVLKVSLAALTLVFAVSSHAADKKLVVATDTAFVPFEFKQGD
                     KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID
                     FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
                     IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL
                     RDKVNGALKTLRENGTYNEIYKKWFGTEPK"
     gene            26637..27296
                     /gene="glnP"
                     /locus_tag="JNZ89_001565"
     CDS             26637..27296
                     /gene="glnP"
                     /locus_tag="JNZ89_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015367581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HAY8935479.1"
                     /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR
                     TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG
                     AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK
                     DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
                     L"
     gene            27293..28015
                     /gene="glnQ"
                     /locus_tag="JNZ89_001566"
     CDS             27293..28015
                     /gene="glnQ"
                     /locus_tag="JNZ89_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017491583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HAY8935480.1"
                     /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL
                     RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
                     LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
                     DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
                     NPQVLIKNPPSQRLQEFLQHVS"
BASE COUNT         6982 a         7539 c         6969 g         6733 t
ORIGIN      
        1 tgtctttgca atatactccg tatcgacaga atcaataata ttataattac cttcgctatt
       61 ataaataatc agtttttcac gagcgagttg attcttggca atgatctcat gaccttgttt
      121 caaaaataga acttcatcat tagcgctgat ttgatcaaga tactcgttca aataccgcca
      181 gtttaaatcg acatgaattt tatctaccgc taacaaatcg tgatctttgc cgttgatacg
      241 tagcgtaaaa gagatacatt ttttacccgg acgatcaaag caattgtatg ccggattcca
      301 gctgttgtta gagtcatctg aagccaccga ccacggtcgt ttcgatgggt taaaatcggc
      361 aaaaataacc cgccctgact cgtcgacaag cggtccattt acttattcct gatgataaac
      421 aacgatttta tcattcgccc tccgtgaaaa gagataatat ttattatcat caagtaccag
      481 tcccaccgag tctaaaaatg gcatcatttc cattttcaga atcacggcac gttgaatctc
      541 ctctgtattt tttaataaat acagtgagtc ctttaatgtc agggccgaac gttcaatatc
      601 tttaaagaaa tagccaacgt ttttctgaat aagttcaaag cggctatcgg cacgttttac
      661 cgcgcgttcc gataccagtt gatagttaat gatgaaaaaa agaccaataa ataacagtgc
      721 tgccaataaa aataaaatta tcagccttat ctttatcttt tcgtataaac tcagcatgtt
      781 aatacattta acaaaataac tatctgaacg ctgtgccgct gcaaaaatag tcccttgctg
      841 cggcttttta accaaattac ccgattctac aaaatcagca gaaagttaca acacttgctt
      901 agggcaataa tttcctgtga ggtgattacc ctttcaagca atattcaaac gtaactatcc
      961 tttaattttc ggatccagcg catcgcgtaa accatcgccc aacaaattga acgccagtac
     1021 ggtcagaaaa atagccaggg ccggaaaaac agcgacatgc ggcgcgataa ccatatccgc
     1081 tcgtgcctca ttgagcattg ctccccactc tggtgtcggc ggctgcgcac cgaggccgag
     1141 aaatgacagg ctggcggcag agataatcga ggtgccaatg cgcatggtga aaaacaccac
     1201 gatagacgag acggtcccag gcaagatatg acgcaataaa atggtcatat cgctggcacc
     1261 aatactgcgt gctgactcaa taaaggtttg ctgtttcaac accagcgtgt tgccgcgcac
     1321 cagtcgggca aacgcgggga tggaaaaaat ggcgactgcg ataatcacgt tagcaatgcc
     1381 gcttcccaac accgcaacaa cagcgatcgc cagtaaaata cccgggaagg caaacagcac
     1441 atcgcaaatg cgcatgatca gccgatccca ccagccttca taatatccag ccaacaagcc
     1501 cagcaacgtc ccgatcgccg caccgataaa cacggcaaac acgcccgccg ccagcgagat
     1561 ttgcgcacca accaggacac ggctgaaaat gtcgcgcccc agtgaatcga cgccaaacca
     1621 gtgctgcaaa gaaggtccgt tattcagatt gtcataatca aaataatttt cggcgtcata
     1681 gggagcgatc cagcgtgcaa aaatggccac cacaatcaat aaaataacga ataatgcggc
     1741 ggtcatcgcc atatgctgac ggcgaaatcg tcgccagaat tcatgccacg gtgtacgcac
     1801 ctggtcaggt ttgaccagtg gcatggcgtt taacaccgcc tgacgtcgcc agttaaatag
     1861 tcgcatcctt acttgtacct gatagccggg ttaatggcgg cgtaaagcac atccaccact
     1921 aagttgataa gaataaattc cagcgagaaa agcagaattt ccgcctgaat caccgggtaa
     1981 tcgcgcattt ctacggagtc aacgagtaag cgtccaagtc cgggccagtt gaaaactttc
     2041 tccaccacga tagaaccacc gagcaaaaag ccaaactgta agcccatcat ggtcactacc
     2101 gggatcatcg cgttacgtag cccgtgtttg aggacaaccc aggtttcgct cacccctttc
     2161 gccctcgcgg tacgcatata atcttcgctt aaaacatcga caaacgacgc gcgggtaaag
     2221 cgcgccatca cggctgccac tgccgcgccg agcgtcaggg aggataaaat gtagtgctgc
     2281 caactgtctg ctcccacggt aggcagccag cccagttcaa cggagaatac ctgaattaaa
     2341 agcatcccca gcgcaaatgc cggaaacgag atccccgaca ccgcaatggt catactcaat
     2401 cgatccggcc aacgattacg ccagacggcg gcgataattc ccgccgccat accaaatatc
     2461 accgcccaga ccatactggt tatggtcagc cacagcgttg gcataaagcg gctggcaatc
     2521 tcatcggcaa ccggacgacg cgacaccatc gacaggccaa aatccccctg cacagcattg
     2581 ctgatatagt gccagaactg gtgatacagc ggctgatcca accccagctg ctgacgcacc
     2641 agttctataa cctgcgcatc agcttcgggc ccggcaatca atcgcgccgg atcgccgggc
     2701 agcatatgca caaataaaaa caccagcacc gagacgataa acagcgtcgg aatcaacccc
     2761 agtaagcgtt tgataacgta attaagcatt ccactccctg cgttgcttat tgcaaatccg
     2821 cgtcttcaaa gctgaagccg gtgtctggca tgatccaaaa accggtcagg tttttactgt
     2881 gtgccgacac cagtttttct accaccagcg ggatccacgg cgactcttgc cagatgatat
     2941 cctgcgccgc cttatacaag cgggtctttt ccgccggatc attagttttc agtgcctgag
     3001 ccaggaagtc gtccacctgt ttattgctgt aaaatgcggt attaaacagc gtcggtggcc
     3061 agttttgcga ggcgaacagt ggcgatagcg cccagtccgc ttcgccggtt gaagccgacc
     3121 agccagtgta gaacatccgc acgccgctct ctttttgccc tttaccttca acttctgccg
     3181 cccgctgtcc ggcatccatc gcggtcacct gggctttaat cccgacctgc gctaactgct
     3241 gctgggtaaa ttgcagcact ttctgcgcgg tgctgtggtt atgtgacgac cacagcgtgg
     3301 tactgaaacc gttgggatat cccgcctctt tcagtaattc gcgcgctttc actggatcgt
     3361 aaggccacgg tttataactt tgcgcgtagg cgatacttgg cggtaccaca ccagtagctg
     3421 gcgttgcata gcccgcaaag gcaactttca ccagcgccgg acggttaatg gcgtaattca
     3481 gcgcctcacg gaccttcggg ttatcgaacg gcttttgcgt cacgttcata ctgatataac
     3541 gctgcataat tgacggactg gccatcaact cgatattttt gtttttctcc agcagtgcgg
     3601 cctgctcgta gggaatgggg aaagcaaact gcgcttcacc ggtttgcagc attgccgcgc
     3661 gggtgttgtt atccgccacc ggacgccagg ttatgctgtc cagtttgggc aatcctggct
     3721 gccagtaacc cgcgaatttt ttcaccttca caaaatcggt ctgattccag gtatccagtt
     3781 catacggtcc ggttcccacc ggatgaaaac caatctcctt gccatatttt tccagcgctg
     3841 ccggtgaaat catcgcggtc gccggatgga caagaatatt aataaacgct gagaacggct
     3901 gtttgagggt aatctttacc gttgtcggat cgatcgcctc cgttttggca atattcttat
     3961 acaggttata gcgtttaaga tgattcgccg gatcgctggc ccggtccaga ttcgctttca
     4021 ccgccgcggc gttgaaatcg gtgccatcct ggaatttaat tccttcccgc aatttcacgg
     4081 tgtaagtaat gccgtcatcg gaaacggtat aactctccgc cagcacgttt ttcagtttca
     4141 tctctttatc cagaccgaac agcccctggt aaaacgattt cgctacggcc tgagataacg
     4201 tgtcattcgc gtcatacgga tcgagcgtgg tgaaattcga tcctaccgcc accaccacat
     4261 ctttggcagc gaatgcacaa gatgccatca acgctgtcgc aatgcccagc gccactaacc
     4321 cactacggtg tacagctctt gccattttat tctccgcctg aatgttatct acgcatgaat
     4381 gcgtattctg attgtggttg tgcgacgtaa tgccccggcc cgacgcattg caacgagacg
     4441 gctgccacct cttcgccacg cagatgaata ttgctgggaa gatcgtccga cagcagtaca
     4501 cgctgcggtc gttgtcggga cggttcagcg accggaactg ccgccagtaa tttacgcgta
     4561 taaggatgct gcgggttttc gaagaccgcg cgccgtggac caatttcaac aatttgcccg
     4621 agatacatca ccgccacacg atgactaatc cgctctacca cggccatatc gtgggagata
     4681 aacagatacg caatgccgaa atcacgctgg agatcgagca acaagttgat aatctgcccg
     4741 cgaatagaaa catccagcgc cgaaacggct tcgtcggcaa tgatcacttt tggattcaat
     4801 gccaacgcgc gagcaatgca gatgcgctgg cgctgaccgc cggaaaactc atgcgggtaa
     4861 cgccaggcat gttcaggtaa caggcccacg cgctccagca accacgcaac gcgtgcagcc
     4921 gcgtctttac ctggcaataa accgtgtaca cacagcggtt cgataatcga atcaccgatg
     4981 gtctgacgtg ggtccagcga agcgtaaggg tcctgaaaaa taaactgaat atcccggcgc
     5041 aatgcctgaa gtttgccagg tgacaaggta tcgattcgct gaccgttaaa gataatttcg
     5101 ccgccctgcg attcgaccag gcgcagcaac gcccgcccgg tagtggattt accgctgcca
     5161 gactcgccca ccagcgatag cgtttcgcca ggccagagat caaaactgac tttctcaacg
     5221 gcatgcactt cccgcgttac gcgattcaac aaaccgctgc gcaaagggaa acgggtgaca
     5281 agattacgca ctcgtaaaac aggttcgcca tccaccaccg ttttctgctc gatggggggt
     5341 tcctgtttcg ctggatgttc aagcgatatc aatgggaaac gtcggggata atctaaccct
     5401 ttcatcgcac caagttgcgg aacagcagct aacagcgcac gggtgtaagg atgttgcggt
     5461 gcatgaaaaa tctgttcgac ggtacccgtt tccaccgcct cgccctgata catcaccagt
     5521 acccgatcgg ctatctctgc caccacgccc atatcgtgcg tgataaagat aacgcccatc
     5581 gacatctctt tttgcaatac tttgattaat tgcaggatct gcgcctgaat agtgacatcc
     5641 agcgcggtgg ttggctcatc ggcaatcagc accgccgggc ggcatgacag cgccatcgca
     5701 atcatcactc gctggcgcat cccgccagag agttgatgcg gataacgtga aagaatggtt
     5761 tgtgcctcag gaatgcgtac ctgatccagc atccgcttcg cctcgaccat cgcttcttca
     5821 cgactggcgt tctgatgcag acgaattgat tcggcaatct gttcacccac agtaaatacc
     5881 gggttcagcg atgtcatcgg ctcctgaaat atcatcgcca tatccgcacc gcgaacatgg
     5941 cgcatttgtg cagcgctctg ctcgctaagt tcaatcactt cgcgactgcg ccgctgcaac
     6001 agcattttat cgcactgtac taaaccgccc gcctgttcca acaggcgcat caatgccaac
     6061 gcagtcactg acttaccgga gccggattcg ccaacaattg ccagcgtctc accgcgttgc
     6121 agactaaaag agagattgcg gaccgcagct attttctgct ggtcctgcat aaaggcaata
     6181 ttcagatttt caaccgccag cacattaccg gcatcaagtt catcactgtg tggcaacggt
     6241 gtcccctttt tcacggtaga taccggtggt tggcgtatcg cctgcgtagc cccaggcgcg
     6301 atacattcct tcggtgttaa acggtagcgc gacattccct tcatggccga tagcgattaa
     6361 gccaccgcta ccgccaagcg cagggagttt ttccattact acccgctcgc aggcttccgc
     6421 gagacttaat ccgccgtaat ccattaacgc ggcgatgtca tatgccgcca gcgcgcggat
     6481 gaagacttcg cccgtgccgg tacaagaaac cgccacactg gcgttattgg cgtagcatcc
     6541 ggcacccact aagggactat cgccaactcg tccgggtaat ttattggtca ttccgcctgt
     6601 ggacgtggct gccgccaaat tgccgtctaa atccaacgcc acggccccca cggtgcccat
     6661 tttctgtttt tcatccagtg gcgcaccgct atggtcgagg acggttgccc cttccttgcg
     6721 cgctgccagt agttgttcat aacgcaaagg cgtggagaaa atcgccggcg agacgcgctc
     6781 catgccacga gcaaacgcaa aattttctgc cccttcgcca atcatcatca catgcgggct
     6841 ttgctccatc accagccggg cggcaagaac cggattacgc agatgactaa cgcccgccac
     6901 cgcaccggct ttcagggtgt taccatccat cacacaggcg tccagttcat gggtttcatc
     6961 acgcgtaaag acagcgccaa ttccggcgtt aaacagtgga cactcttcca gcagacgcac
     7021 cgcttccgtc accacatcca gcgcactttc gcccgcttcc agcattttct gcccggtttc
     7081 aacaatggca gacaacgcct caatgtagcg taattcctgt tgcagactca tctgcgcgcg
     7141 gctaattgca cctgcgccac catgaattgc aatgactgct ttgcccatag tattcgtcca
     7201 ttaagggtgg ctcgccactt ttgctataaa tatcagaatt tttatgaatt actcattcaa
     7261 tttttgaata tagaaagatg gatatggcat gtaaaggcag gagccaacgc tacgcccgag
     7321 gtggcataca gtctgtggcg tttttctgac ataataggca aattcgattt tgcctccgca
     7381 ggagtgtttt catggaattt accaccggat tgatgtcgct cgacaccgcg cttaatgaga
     7441 tgctttctcg cgtcacccca ctgaccgccc aggaaacgct gccactggta cagtgttttg
     7501 gtcgtattct ggcgagcgat gtcgtttcgc agcttgatgt tccggggttt gataactccg
     7561 caatggacgg ctacgcggtg cgtttagccg atattgcctc cgggcaaccg ctgcccgttg
     7621 ccggtaaatc ctttgccggt cagccgtatc atggtgaatg gcctgcgggc acctgcattc
     7681 gtattatgac cggtgcgccg gtgccggaag gctgcgaagc ggtggtgatg caggagcaga
     7741 ctgaacaaac ggacaatggc gtgcgtttta ctgctgaagt gcgtagcggg caaaatattc
     7801 gccgtcgcgg tgaagatatc tctgcaggtg cggttgtttt cccggcggga actcgcctga
     7861 ctaccgcaga gctgccagta attgcttcac tggggattgc cgaagttccg gtgattcgta
     7921 aagtgcgtgt agcgcttttt tctaccggtg atgaactcca gttgcccggt cagccgctgg
     7981 gtgacggcca aatctacgac accaaccgtc tcgccgtaca cctgatgtta gaacagctgg
     8041 gttgcgaggt aatcaactta gggattatcc gcgacgatcc ccatgccctg cgcgccgcat
     8101 ttattgaagc cgacagccag gcggatgtag tgatcagttc cggcggtgtt tcagtgggtg
     8161 aagcggatta caccaaaacg attcttgaag agctggggga gatcgccttc tggaagctgg
     8221 cgattaaacc aggtaaaccg ttcgcgttcg gtaaactcag caatagctgg ttctgcggcc
     8281 tgccgggcaa cccggtttca gcgacgctga ccttctatca actggtacag cctttgctgg
     8341 caaaactaag cggcaacacc gccagcggcc tgcccgcgcg ccagcgcgta cgcacagcgt
     8401 cccgcctgaa aaaaacgcca ggacgtcttg atttccagcg cggcgtgctg caacgcaacg
     8461 ccgacggtga acttgaagtg acgaccaccg gacatcaggg ttcacatata tttagctcct
     8521 ttagtctcgg caactgcttt atcgtgctgg aacgcgatcg cggcaatgtg gacgtgggcg
     8581 aatgggtgga agtagaaccg tttaacgcgt tgttcggagg cctgtaatgg cggaactcag
     8641 cgatcaggag atgctgcgct acaaccggca aatcattctg cgcggttttg attttgacgg
     8701 tcaggaggcg ctaaaagatt ctcgtgtgct gatcgtcggc ctcggtggac tcggctgcgc
     8761 agcttcgcag tatctggcaa gcgccggtgt cggcaacctg acgctgctcg acttcgacac
     8821 ggtttcgctc tcgaatctgc aacgccagac actgcacaat gatgccacgg tcgggcaacc
     8881 gaaggtggaa tccgcccgtg acgccctgac gcggatcaac ccacatatcg cgattacgcc
     8941 agtcaatgca ctgctagatg acgcagaact tgcagcattg attgctgaat acgatctggt
     9001 gctcgactgt acggataacg ttgcggtacg taatcaactg aacgcaggct gttttgccgc
     9061 gaaggtgccg ctggtttccg gcgcggcaat tcgtatggaa gggcaaatca cggtcttcac
     9121 ttatcaggac ggcgaaccgt gctatcgctg ccttagccgt ttgtttggcg agaacgcgtt
     9181 aacctgcgta gaagcaggcg tgatggcacc gttgatcggc gtaattggtt cgttgcaggc
     9241 aatggaagcg atcaaactgc tggcaggtta tggcaaaccg gccagcggga aaatcgtcat
     9301 gtacgatgcg atgacctgtc agtttcgcga aatgaaactg atgcgtaatc cggggtgtga
     9361 ggtgtgcggg cagtaattgc cacctccagg ccagataaga cgcggcactc cgccacgtca
     9421 tcagcaattt atgaggatgc agaacgtccg gttaaatcga cgttctgcca aacgctccca
     9481 gccagtcctg ttcaaacttc gccacagcgg catcaaccgc cggatagcta atcatctgtt
     9541 gtgccacatc cagtggcagc gtaattgatt cacatcctgc cagtaagcag tccagcgcct
     9601 gacgcgggtt tttgaaactc gctgccagca ctttcgcctg cggcgcatgc attttcaata
     9661 actggtgtaa gtcggtcaca gtctgaatgc cgctaccgcc ctgagcatca atacgattaa
     9721 cgtaaggcgc aacatattcc gcacctgcca gcgccgacag cagcccttgt gctgcgccat
     9781 ataccgcggt tcccagcgtt ggaatccctt ccgcttttaa catcttaata gctgccagcc
     9841 cctcggcggt caccggaact ttcaccacga tatccgcaat aatagaacgc aatttacgtg
     9901 cgtcattcac catcccttca gcagtggtag ccattacctg ggcaaacaga cgcccctgac
     9961 cgcccatcgc ttcatgaagt tgcggaagca caacatccag cggtttttta cccgcggcga
    10021 taatgcttgg gttagtggtc acacccgcca gcggaaaaat acgtgacagc gccttcactg
    10081 caacaacgtc tgaagtatcc agatacagtt ccataaccat cctcaaaatg tactttttgt
    10141 ctgaatgtag actatcacgg gaaaactctc tgaacagttg acgcacatca atccaacttt
    10201 cattcgaaag tattttaatg tttgaacgaa acagagaggc aactatgatt ttcaatattc
    10261 agcgctactc gacccatgat ggccccggta tccgcacggt cgtatttctt aaaggctgtt
    10321 cgctgggctg ccgctggtgt cagaacccgg aaagccgcgc ccgcacgcag gatctgctgt
    10381 atgacgcacg actgtgtctg gaaggctgcg agctgtgcgc taaggcagcg ccggaagtga
    10441 ttgagcgcgc attgaatggt ttgcttattc atcgggaaaa gttaaccccg gagcatctga
    10501 cggcgctaac cgactgctgc ccgacacagg cgttaaccgt gtgtggggaa gtgaaaagcg
    10561 ttgaggagat catggcgacc gttctgcgcg ataaaccgtt ttacgatcgc agcggcggcg
    10621 gcttaacgct ttcgggtggt gaacccttta tgcagccgga aatagcgacg gcgctactgc
    10681 aagcctgcca cgaggcaggc attcatactg cggtagaaac ctgtctgcat gtgccgtgga
    10741 aatatatcac cccttctctg ccctatatcg atctgtttct tgccgattta aaacacattg
    10801 ccgacgcgcc gtttaaacag tggaccgacg gtaacgccgc caaggtgctg gataacctga
    10861 aaaaactcgc cgcagcgggc aaaaaaatca ttatccgcgt gccgctgatt cagggcttta
    10921 atgccgacga aacctctgta aaagccatta ccgattttgc cgccgacgag ctgcacgttg
    10981 gcgaaattca ttttctgccc taccacacgc tgggcatcaa caaatatcac ttacttaatc
    11041 tgccctatga cgccccggaa aaaccgcttg atgcgccaga cctgctcgac tttgcccagc
    11101 agtatgcctg ccagaaaggg ttaaccgcga ccttacgagg ataacaacca tgaccacact
    11161 gaaactggac acgctcagcg accgcattaa agcgcacaaa aatgcgctgg tgcatattgt
    11221 gaaaccgccg gtctgtaccg agcgcgcgca gcactatacc gagatgtatc aacaacatct
    11281 cgataagccg atcccggtac gtcgcgcgct ggctctggcg catcacctgg cgaatcgcac
    11341 catctggatc aagcacgatg agttgatcat cggcaaccag gcaagcgagg ttcgcgctgc
    11401 gccgatcttc ccggaatata ccgtctcgtg gatcgaaaaa gagattgatg atctggcaga
    11461 tcgtcccggt gctggttttg cggtgagcga agagaacaaa cgcgttctgc atgaagtgtg
    11521 cccgtggtgg cgcggtcaga cggtacagga tcgctgctac ggcatgttta ccgatgagca
    11581 aaaaggtctg ctggcgaccg gaatcattaa agcggaaggc aatatgacct ccggcgatgc
    11641 gcacctggcg gtgaatttcc cgctgctgct ggaaaaaggt cttgatggtc tgcgcgagaa
    11701 agtagcggaa cgtcgctcgc gcatcaatct gacggtactg gaagatttgc acggcgaaca
    11761 gttcctgaaa gcgattgata tcgtgctggt ggcagtcagc gaacacattg aacgttttgc
    11821 agccctagcg cgtgaaatgg ccgcgaccga aacccgcgaa agccgtcgcg atgaactgct
    11881 ggcgatagca gaaaactgcg atcttatcgc ccaccagccg ccgcagactt tctggcaggc
    11941 gctgcaactg tgttacttca tccagttgat attgcagatc gaatctaacg gtcactcggt
    12001 atcgtttggt cgtatggacc agtatctcta cccgtactat cgccgagacg ttgaactcaa
    12061 ccagacactg gatcgcgaac acgccatcga attgctgcat agctgctggc tgaaactgct
    12121 ggaagtgaac aagatccgct ccggctcaca ctcaaaagcc tctgcgggaa gtcctctgta
    12181 tcagaacgtc accattggcg gacaaactct ggttgatggt caaccaatgg acgcggtgaa
    12241 tccactctct tacgcgatcc tcgaatcctg cggtcgcctg cgttccactc agcctaacct
    12301 cagcgtgcgt taccatgcag gaatgagtaa tgatttcctc gacgcctgcg tacaggtgat
    12361 ccgttgcggc ttcgggatgc cggcgttcaa caacgacgaa atcgtgatcc cggaatttat
    12421 taaactcggt attgaaccgc aggacgctta cgactacgca gcgattggtt gtatcgaaac
    12481 cgccgtcggt ggcaaatggg gctatcgctg taccggcatg agctttatca acttcgcccg
    12541 cgtgatgctg gcggcgctgg aaggcgggcg tgatgccaca agcggcaacg tgttcctgcc
    12601 acaagaaaaa gcgttgtcgg caggcaactt taacaatttc gatgaagtaa tggacgcgtg
    12661 ggatacgcaa atccgttatt acacgcgtaa atcaatcgaa atcgaatatg tcgtcgacac
    12721 catgctggaa gagaacgtgc acgatattct ctgctcggcg ctggtggatg actgtattga
    12781 gcgagcgaaa agtatcaagc aaggcggcgc gaaatatgac tgggtttctg gcctgcaggt
    12841 tggcattgcc aacctcggca acagcctggc ggcagtgaag aaactggtat ttgaacaggg
    12901 cgcgattggt cagcaacagc tggctgccgc actggcggat gacttcgatg gcctgactca
    12961 tgagcaactg cgtcagcggc tgattaacgg tgcgccgaag tacggcaacg acgatgatac
    13021 tgtcgatacg ctgctggctc gcgcttatca gacctatatc gacgaactga aacagtacca
    13081 taatccgcgc tacggtcgtg gtccggttgg cggcaactat tacgcgggta cgtcatctat
    13141 ctccgctaac gtaccgtttg gtgcgcaaac tatggcaacg ccggacgggc gtaaagccca
    13201 caccccgctg gcagaaggcg ctagtccggc ctctggtact gaccatctcg gccctactgc
    13261 ggtcattggc tcggtgggta aactgcctac ggcagcgatt ctcggcggcg tgttgctcaa
    13321 ccagaaactg aatccggcaa cgctggagaa cgaatctgac aagcagaagc tgatgatcct
    13381 gctgcgcacc ttcttcgagg tgcataaagg ctggcatatt cagtacaaca tcgtttcccg
    13441 cgaaacgctg ctggaggcga aaaaacatcc ggatcagtac cgcgatctgg tagtgcgtgt
    13501 cgcgggttat tccgccttct tcaccgcgct ctctccagac gctcaggacg atatcatcgc
    13561 tcgtactgaa catatgctgt aatctcttcg gcccggctgc ggcgtcgccg ggctaaatca
    13621 ttcacatcat caatttcatc cttactttca ttcgaaatat aatttgtgct ctgcgtcaca
    13681 ttgttattac actgttacgg tttcattttc gagccaggag cacacctatg agcgtaaaag
    13741 ttatcgtcac agacatggac ggtacttttc ttaacgacgc caaaacgtac aaccaaccac
    13801 gttttatggc gcaatatcag gaactgaaaa agcgcggcat tgagttcgtt gtcgccagcg
    13861 gtaatcagta ttaccagctt atttcgttct ttcctgagct aaaggatgag atctcttttg
    13921 tcgcggaaaa cggcgcactg gtttacgaac atggcaagca actgttccac ggcgaactga
    13981 cccgacatga atcgcggatt gttattggcg agttgctaaa agataagcaa ctcaattttg
    14041 tcgcctgcgg tctgcaaagt gcatatgtca gcgaaaatgc ccccgaagca tttgtcgcac
    14101 tgatggcaaa acactaccat cgcctgaaag ctgtaaaaga ttatcaggag attgacgacg
    14161 tactgttcaa gttttcgctc aacctgccag atgaacaaat cccgttagtg atcgacaaac
    14221 tgcacatagc gttcgatggc attatgaaac ccgtcaccag tggttttggc tttatcgacc
    14281 tgattattcc cggtctacat aaagcaaacg gtatttcgcg gttactgaaa cgctgggatc
    14341 tgtcaccgca aaatgtggta gcgattggcg acagcggtaa cgatgcggag atgctgaaaa
    14401 tggcgcgtta ttcctttgcg atgggcaatg ctgcggaaaa cattaaacaa atcgcccgtt
    14461 acgctaccga tgataataat catgaaggcg cgctgaatgt gattcaggcg gtgctggata
    14521 acacatcccc ttttaacagc tgacctctct accggagccg tgcgctccgg ttttcccttc
    14581 tttttacatc ctgtacatca catcaaatca ttaaacttgc attaacttat ttataactta
    14641 tattgtcaca tgcaaatcat aatggtttcg aatgaaagtt aatgagaggt ggttatggct
    14701 tctactttta ccagcgacac attgccagcc gatcacaaag cagctatccg tcagatgaag
    14761 cacgcgctgc gggcgcagct tggcgacgtc cagcagatct ttaatcagct aagcgatgac
    14821 attgccacgc gagtggctga aatcaacgca ctcaaagcac agggcgatgc cgtctggccg
    14881 gtgctgtctt atgccgatat caaagcaggt catgttactg cagagcagcg cgaacagatt
    14941 aaacgtcgcg gttgtgcggt gataaaaggc catttctccc gcgaacaagc gctaggctgg
    15001 gatcagtcga tgctggacta tctggaccgc aaccgctttg acgaggtcta caaaggcccc
    15061 ggcgataatt tcttcgggac gctcagcact tcacgtcccg agatttaccc catctactgg
    15121 tcgcagacgc aaatgcaggc ccgccagagt gaagaaatgg cgaatgcgca gtcgtttctc
    15181 aatcgtctgt ggacatttga aagtgatgga aagcaatggt ttaacccgga tgtgagcgtc
    15241 atctaccctg accgtatccg ccgccgtccg cccggaacga cctccaaagg tcttggagcg
    15301 cataccgact ccggggcgct ggaacgctgg ctgcttccag cgtatcagcg cgttttcgcc
    15361 aacgtcttta atggcaatct ggcgcaatat gatccctggc atgcggcaca tcgtacggaa
    15421 gttgaagagt acacggtgga caacaccacc aaatgttccg tgtttcggac attccagggc
    15481 tggacagcgc tctctgatat gctgcctggt caggggttgc tgcacgttgt gcccattcct
    15541 gaagccatgg cgtacgtact gttacgtccg ctgcttgatg atgtgccgga ggatgaactg
    15601 tgcggcgtag cgcccggaag agtgttgccg gtatcagagc aatggcatcc actgttaatt
    15661 gaggcgttaa ccagcattcc aaaactcgag gccggagact ccgtctggtg gcactgcgac
    15721 gtcatccatt ccgttgcccc cgttgaaaat caacagggtt ggggcaacgt gatgtacatt
    15781 cctgcggcac cgatgtgcga gaaaaatctt gcctacgcgc acaaggtgaa ggccgcactg
    15841 gaaaaaggcg catcgccggg cgacttcccg cacgaggact atgaaacaaa ctgggaagga
    15901 cgctttacgc ttgccgacct caacattcac ggtaagcgag cgttgggcat ggatgtttga
    15961 gagttaatgg aagtgaattg atgtgggatt aagaaaatcg attcgacgtt actcagattg
    16021 ctgacaagtg cgctttctta atgcctgatg cggcgttaac gccttatctg gcctacaaag
    16081 tcctgcagat tcaatatatt acaggtactg cgtaggcctg ataagcgtag cgcatcaggc
    16141 tattttgcat ttgtcatcag ccgccgtcac cccgacagta tcggggtgac ggataatcac
    16201 ttactcgatc cctttactac gcaggtaatc ttcgtaatta ccgctaaagt cgatcacgcg
    16261 ttccggggtg atttccagaa tgcgggtcgc cagggagctt acgaactcac ggtcgtgtga
    16321 aacaaagatc agcgtgccct gatacagttc cagcgccatg ttcagtgact cgatggattc
    16381 catatccagg tggttggtcg gttcgtccat gatcagaatg ttcggcttct gcatcattaa
    16441 cttaccaaac agcatccgcc ctttttcccc accggaaagc actttagctg gctttttgat
    16501 gtcgtcctgg ctgaacagca aacgaccgag aatgctgcgt accgcctgct cgtcatcgcc
    16561 ttcctgcttc cactgactca tccattcgaa cacggtcaga tcattttcaa actcatattc
    16621 gtggtcctgg gcgtagtaac caatgcgcgc gttttcagac cattttacgg tgccgctgtc
    16681 cggttgcaga tcgcccacca gcgttttcat cagcgttgat ttaccgacgc cgttggtacc
    16741 cagtaccgca agtttttcac cgacctccag cagcaggttg agatttttaa acagtggacc
    16801 gttatcaaac cctttggtca gaccttccac ttccagcgcg ttacggaaca gtttcttatc
    16861 ctgttcaaaa cggatgaacg ggttctgacg gctggaggct ttcacctctt ccagtttgat
    16921 tttatcaatc tggcgcgcgc gcgaagttgc ctggcgagat ttcgaggcgt tggcgctaaa
    16981 gcggctaacg aaagattgca actcagcaat ctgcgctttc ttcttggcgt tatcggccag
    17041 cagacgttca cgcgcctggg tcgccgccgt catgtactca tcgtagttac ccggataaac
    17101 gcgcagctcg ccgtaatcca gatccgccat gtgggtacag accatgttaa ggaagtgacg
    17161 gtcgtgcgag atgatgatca tggtgctgtc acgctcgttc agcacctgtt ccagccagcg
    17221 aatggtgtcg atgtcgaggt tgttggtcgg ttcgtcgagc aggagaatat ccggatcagc
    17281 aaacagcgcc tgcgccagaa gcacacgcag cttccagcca ggagcaactt cactcatcgg
    17341 gccgtagtgc tgttccactg gaattcccac gccaagcaac aattcaccgg cgcgagcttc
    17401 cgcagagtaa ccgtccattt cgccgtattt aacttccaga tcggccactt tatagccgtc
    17461 ttcctcactc atttccggca aagcatagat gcggtcacgc tcctgcttca cttcccacaa
    17521 ctctttatgc cccatgatca ccgtatccag cacagtgaac tcttcaaagg caaactgatc
    17581 ctgacgcagc ttaccaatgc gctcgttggg atcgagggaa acgttaccca aagtcggctc
    17641 taagtcgccg ccgaggatct tcataaaggt ggatttacca ctaccgttcg cgccaatcag
    17701 gccgtaacgg ttgccgccgc caaatttgac ggaaatgttt tcaaacaacg gcttactgcc
    17761 gaactgcatg gtgacgttac tggaaactaa cacaggcgta tcctgaaaag agatatgaca
    17821 aaccgcgcat tatgccataa gtctgaaaga agatcctgct cctcgcttaa ggtctacact
    17881 caagccaaag gcaaaaaatg tgatttcgta cacatctgat ttcactgtga gctggaatga
    17941 acttataatg cgcttccaat actctaatat tctcaaccca atggcctgcc aggcacaaaa
    18001 tctcgcttaa catgaatatg aaattgaaaa cattattcgc agcggccttc gctgttgtcg
    18061 gcttttgcag taccgcctct gcggtaactt atcctctgcc aaccgacggg agtcgcctgg
    18121 ttggtcagaa tcaggtgatc accattcctg aaggtaacac tcagccgctg gagtattttg
    18181 ccgcggagta ccagatgggg ctttccaata tgatggaagc gaacccgggt gtggatacct
    18241 tcctgccgaa aggcggtact gtactgaaca ttccgcagca gctgatcctg ccggataccg
    18301 ttcatgaagg catcgtcatt aacagtgcag agatgcgtct gtattactat ccgaaaggga
    18361 ccaacaccgt tatcgtgctg ccgatcggca ttggtcagtt aggcaaagat acgcctatca
    18421 actggaccac caaagttgag cgtaagaaag caggcccgac ctggacgccg accgcaaaaa
    18481 tgcacgcaga gtaccgcgct gcgggcgaac cgcttccggc tgtcgttccg gcaggtccgg
    18541 ataacccgat gggtctgtat gcactctaca tcggtcgcct gtatgctatc catggcacca
    18601 acgccaactt cggtatcggc ctgcgtgtaa gtcatggttg tgtgcgtctg cgtaacgaag
    18661 acatcaaatt cctgttcgag aaagtaccgg tcggtacccg cgtacagttt attgatgagc
    18721 cggtaaaagc gaccaccgag ccagacggca gccgttatat tgaagtccat aacccgctgt
    18781 ctaccaccga agcccagttt gaaggtcagg aaattgtgcc aattaccctg acgaagagcg
    18841 tgcagacagt gaccggtcag ccagatgttg accaggttgt tcttgatgaa gcgattaaaa
    18901 accgctccgg gatgccggtt cgtctgaatt aatcttcaaa acttaaagca aaaggcggac
    18961 tcataatccg ccttttttat ttgccagacc ctagttggcc gggagtataa ctaacaaaac
    19021 atatcccacc aacgccgccc acaacagcat cggtattgaa tagagatgga aacgccacca
    19081 gatgcggcga tcgttcgcca tacgtagcgc aatcaaactt gccagcgatc cgggtaataa
    19141 cccaaagcca cctacgttta ccgcccatgc cagtaataaa gacggcggca catagttcag
    19201 caacaatatg gtactcggca cgttactgat cacctgcgat aaaccgattg ccgttaacca
    19261 taacccgggt tcagatagat gactcacgtt acccaacacg ccttgcaacg ctggaagctg
    19321 ggtcagtaaa tggacgtcga taaacatcgc cataaacacc agcagcagcg tccagtccac
    19381 actgagcacc acgcgacgtg ccagcagcgc aaagcctgcc gccacaatca ccagtcccca
    19441 cagctcttgt ttgaactcca gcgccgttag aaagacgata tacagcccca gacaactcca
    19501 caccagccgc ggtttccact ccggtgtttg cacccccgta tggtattgca gcacctttcc
    19561 agggaaacaa caccagcaca ggagcaggag cgtcagcatc attgcgccag ccagcggtgc
    19621 catttgggca ataaatccgg caaacgaaag accagaacgt ccccagataa gaatattttg
    19681 cgggttgcca attggcgtca gtagcgaacc agcattgact gccagcgcct caaaaataat
    19741 cagacgatta accgggatct cacacagtct ttttagcgtg atagtcagcg gaacaacaat
    19801 aaacagcgcg acatcgttgg tcagaaaggt agaaagcagc gccgccgcca gcaccataaa
    19861 catcgccagc cgacgctccg tagcaaagcg gcgcaccatt ttgcgcccca gcacatcaaa
    19921 ataaccgctt aactccacac ctttggtcag cagcatcagg ccgcttaagg tgatgatggt
    19981 gtgccagtcg atagcagcag gccaggattt cggtgcaaag ggcacgaaaa agcttaatcc
    20041 gataccaaca agaattaata actgaaaaaa acgatcgcct tgcagcgtgc gtaaaaaagg
    20101 caggctcatt tggcaccgtg tttctgggta aacaaacgaa aagcgtcgag cgtctcttca
    20161 ctaacatggt gctccatgcc ttccgcgtcg cgacgggcga tttccggact gacgcccaac
    20221 accaacaaga aattttcgac tatctgatgt cgctcgcggc tttcctgcgc cagcttctct
    20281 ccttctgccg ttaaaaacac gccacgccag gggatcattt caatcagccc catggttgcc
    20341 agccgcttaa gcattttagc caccgtcggt tgcgaaactc ccagacgagc agccatgtcc
    20401 acctgacgag cttcccccac ttccctgatc aagtcagaaa tcagctcaac gtaatcatca
    20461 ataagctcgc gccgatgcgc ctctctgacc tggcggaacc cttcaacgtg ctcttccacg
    20521 ttcactaact gcgtcacttt ttttgctgtt ggcgtacctg cgcgacgact cattgtgctt
    20581 cctcattatg gtgacgcata catagcgttc tcatttcgtg cgcacattgt aaaccagagt
    20641 tgcgaaggta caaaaaatta acgttttagc aatagctata taatatagcc tgtgctatat
    20701 ctgtatgtaa tgcaatcatc cctcaaggat cgacgggatt agcaagtcag gaggtcttat
    20761 gaatgagttc aagaggtgta tgcgcgtgtt tagtcattct ccctttaaag tacggttaat
    20821 actgctctct atgttgtgcg atatggtcaa caacaaaccg cagcaagata aaccttccga
    20881 taaatagcgg cgtcgcggta cgccgcttca ctcctgcttt catgcaggca taacgcgttt
    20941 tggcctgaaa aaccccactt tttgtcggat ttgcaatccc cttcgcaaaa gatttgttcg
    21001 tcagtagttg acctgaacgg cggctcgctc tatcttcttg cagccctgcg tatattgcgg
    21061 ctcgcggatg cggacccctt tccactcttc acgcactctt gcaggtattg acccttgacg
    21121 ccagggtaag cacatggcgt ttgttacgat agtggcatat gaatttaacc ctcaaagaat
    21181 cgcttgttac ccgtagccgg gtatttagcc cgtggactgc gttctacttt ttacagtcgc
    21241 tattaattaa cctcggctta ggttacccct tcagtttgct ctacaccgct gcgtttacgg
    21301 ctattttgct tttgctatgg cgaacattgc ctcgcgtaca aaaagttctg gtcggtgtca
    21361 gttcgctggt ggcggcttgt tatttccctt ttgctcaggc ctacggcgcg cctaatttca
    21421 atacattgct ggcattgcac tccaccaata tggaagagtc gaccgaaatc ctgacgattt
    21481 ttccgtggta cagctacctg gtcggcttat ttatttttgc gctcggcgta atagcaatca
    21541 ggcgaaaaaa agagaatgaa aaagcgcgct ggaatacctt cgacagcctg tgtctggtat
    21601 tcagtgtggc gacatttttt gttgctcccg tgcaaaacct ggcctggggt ggcgtattta
    21661 aactgaaaga tactggctat ccggtatttc gttttgctaa ggatgtcatc gtcaataata
    21721 acgaggtgat tgaagagcaa gaacggatgg caaaactttc cggaatgaaa gatacctgga
    21781 cggtcactgc cgttaagccg aagtatcaga cctatgtggt ggtgatcggt gaaagcgcgc
    21841 gtcgcgatgc cctcggtgcc tttggcggtc actgggacaa taccccgttt gccagcagcg
    21901 ttaacggttt gatatttgct gactacattg ccgccagtgg ctccacgcag aaatcgcttg
    21961 gcttaacgct caatcgcgta gtcgatggca aaccacagtt tcaggataac tttgtcaccc
    22021 tggcaaatcg cgcgggcttc cagacctggt ggttttccaa ccagggccaa atcggcgaat
    22081 acgatactgc tatcgccagc atcgccaaac gtgcagatga agtgtacttc ctgaaagaag
    22141 gtaattttga agcagataaa aacacgaaag acgaagcgtt actggatatg accgctcaag
    22201 tgctggcgca agagcactcg caaccgcagc tgattgttct gcatctgatg ggctcgcatc
    22261 cgcaggcctg cgacaggaca caaggcaaat acgaaacctt tgtgcaatcg aaagaaacgt
    22321 cgtgctatct ctataccatg acgcaaacgg acgatttact gcgcaagctg tacgatcagt
    22381 tacgcaacag cggcagcagc ttctctctgg tttacttttc tgaccacggt ctggccttta
    22441 aagagcgcgg caaagacgtg caataccttg cccatgatga taaatatcag caaaatttcc
    22501 aggtgccttt tatggtcatt tccagcgacg ataaagcgca tcgggtgatt aaagcccgcc
    22561 gctcagccaa tgacttctta ggctttttct cgcagtggac gggaattaaa gcgaaggaaa
    22621 taaatatcaa atacccgttt atatctgaga agaaagccgg gccgatatac atcaccaact
    22681 tccagttaca gaaggtggat tacaaccatc tcggaaccga tattttcgac ccgaaacctt
    22741 aaaaacaaaa atccgccccg agaggcggat tttttatatc accaaagtga ttagaagcgg
    22801 taaccaacac cggcaatcca ggtgcctacg tcaacgctac gaatacggct ctgctcgtaa
    22861 gagaagtcca gagcaacgtt ttccatcggg ttgaactgca gaccagcacc gtaggagaaa
    22921 ccgtagtcgc tggtgtcgtg tttgtaggtc gggtattcag tggtctggaa tttaccataa
    22981 cccacaccca ctacaccgta gatgcttgcc cagtcgttaa tgcggtaagc cggaccagca
    23041 gtgatgccgt agtactggtt tttgttgtag tcaccagagc ttgcagtacg acttttctcg
    23101 gtgtaagtga aagaaccgat cacacccagc gggctgttgt cttcttcata gcggtatttc
    23161 aggttgaaac cgcccatttt gttcatttgg ccctgagcgt cgctctgtgc gtaaccgcca
    23221 gttacggtag aagtcgcagc tacggaagta cctgcggtga aagccagaac tgcggccagt
    23281 gctgaaagac atgcaatttt tttcataacc acctcaaatg tgattcaaat aagtcctaag
    23341 ttttaaatat atcaaaaatt aatgggaaac tcttcgcgat ttgtgatgtc taacgggcca
    23401 tttcatgtaa cagaacgttt ccatacaccg ctatccatct aaatttaaat cactttttca
    23461 gagaactgcg taagtattac gcatgttttc cctgtcattc atccagatta ttcctaatca
    23521 ccagactaat gattccatca atcctggcgc attttagtca aaacggggga aaattttttc
    23581 aacaaatgct caaccagcat tgggtatatc cagtacactc cacgctttac ttaagtctag
    23641 atatttgtgg gagaaaggat gcctggttca ttacgtaaaa tgccggtctg gttaccaata
    23701 gtcatattgc tcgttgccat ggcgtctatt cagggtggag cctcgttagc taagtcactt
    23761 tttcctctgg tgggcgcacc gggtgtcact gcgctgcgtc tggcattagg aacgctgatc
    23821 ctcatcgcgt tctttaagcc atggcgactg cgctttgcca aagagcaacg gttaccgctg
    23881 ttgttttacg gcgtttcgct gggtgggatg aattatcttt tttatctttc tattcagaca
    23941 gtaccgctgg gtattgcggt ggcgctggag ttcaccggac cactggcggt ggcgctgttc
    24001 tcttctcgtc gcccggtaga tttcgtctgg gttgtgctgg cggttcttgg tctgtggttc
    24061 ctgctaccgc tggggcaaga cgtttcccat gtcgatttaa ccggctgtgc gctggcactg
    24121 ggggccgggg cttgttgggc tatttacatt ttaagtgggc aacgcgcagg agcggaacat
    24181 ggccctgcga cggtggcaat tggttcgttg attgcagcgt taattttcgt gccaattgga
    24241 gcgcttcagg ctggtgaagc actctggcac tggtcggtta ttccattggg tctggctgtc
    24301 gctattctct cgaccgctct gccttattcg ctggaaatga ttgccctcac ccgtttgcca
    24361 acacggacat ttggtacgct gatgagcatg gaaccggcgc tggctgccgt ttccgggatg
    24421 attttcctcg gagaaacact gacacccata cagctgctgg cgctcggcgc tatcatcgcc
    24481 gcttcaatgg ggtctacgct gacagtacgc aaagagagca aaataaaaga attagacatt
    24541 aattaaattt acatttctgc atggttatgc ataaccatgc agaatttctc gctacttttc
    24601 ctctacaccg tctttatata tcgaattatg caaaagcata tttattccga aaattcctgg
    24661 cgagcagata aataagaatt gttcttatca atatatctaa ctcattgaat ctttattagt
    24721 tttgtttttc acgcttgtta ccactattag tgtgatagga acagccagaa tagcggaaca
    24781 catagccggt gctatactta gtctcgttaa ttactgggac ataacatcaa gaggatatga
    24841 aattatgagt accgctaaat tagttaaatc aaaagcgacc aatctgcttt atacccgcaa
    24901 cgatgtctcc gacagcgaga aaaaagcaac agtagagttg ctgaatcgcc aggttatcca
    24961 gtttattgat ctttctttga ttaccaaaca agcgcactgg aacatgcgcg gcgctaactt
    25021 cattgccgta catgaaatgc tggatggctt ccgcaccgca ctgatcgatc atctggatac
    25081 catggcagaa cgtgcagtgc agctgggcgg tgtagctctg gggaccactc aagttatcaa
    25141 cagcaaaacc ccgctgaaaa gttacccgct ggacatccac aacgttcagg atcacctgaa
    25201 agaactggct gaccgttacg caatcgtcgc taatgacgta cgcaaagcga ttggcgaagc
    25261 gaaagatgac gacaccgcag atatcctgac cgccgcgtct cgcgacctgg ataaattcct
    25321 gtggtttatc gagtctaaca tcgaataaat ccatcgctga tggtgcagaa ctttagtacc
    25381 cgataaaagc ggcttcctga caggaggccg ttttgttttg cagcccacct caacgcactt
    25441 atttagtgca tccatctgct atctccagct gattaagtaa attttttgta tccacatcat
    25501 cacacaatcg ttacataaag attgtttttt catcaggttt tacgctaaat aatcactgtg
    25561 ttgagtgcac aattttagcg caccagattg gtgccccaga atggtgcatc ttcagggtat
    25621 tgccctataa atcgtgcatc acgtttttgc cgcatctcta aaaatcaatg agttgcaaaa
    25681 ctggcacgat tttttcatat atgtgaatgt cacgcagggg atcgtcccgt ggatagaaaa
    25741 aaggaaatgc tatgaagtct gtattaaaag tttcactggc tgcactgacc ctggtttttg
    25801 cggtttcttc tcatgccgcg gataaaaaat tagttgtcgc gacggatacc gccttcgttc
    25861 cgtttgaatt taaacagggc gataaatatg tgggctttga cgttgatctg tgggctgcca
    25921 tcgctaaaga gctgaagctg gattacgaac tgaagccgat ggatttcagt gggatcattc
    25981 cggcactgca aaccaaaaac gtcgatctgg cgctggcggg cattaccatc accgacgagc
    26041 gtaaaaaagc gatcgatttc tctgacggct actacaaaag cggcctgtta gtgatggtga
    26101 aagctaacaa taacgatgtg aaaagcgtga aagatctcga cgggaaagtg gttgctgtga
    26161 agagcggtac tggctccgtt gattacgcga aagcaaacat caaaactaaa gatctgcgtc
    26221 agttcccgaa catcgataac gcctatatgg aactgggcac caaccgcgca gacgccgttc
    26281 tgcacgatac gccaaacatt ctgtacttca tcaaaaccgc cggtaacggt cagttcaaag
    26341 cggtaggtga ctctctggaa gcgcagcaat acggtattgc gttcccgaaa ggtagcgacg
    26401 agctgcgtga caaagtcaac ggcgcgttga aaaccctgcg cgagaacgga acttacaacg
    26461 aaatctacaa aaaatggttc ggtactgaac cgaaataata acgctacacc tgtaaagcgc
    26521 actggcagtt ccctctcccc tctggggaga ggattagggt gaggggcgca aacccgctcc
    26581 ggggccatta attaccctga atttgattat ttacaccacg gtaacaggaa caacatatgc
    26641 agtttgactg gagtgccatc tggcctgcca ttccgcttct gattgaaggt gccaaaatga
    26701 ccctgtggat ttcggtcctc ggtctggctg gcggtctggt aatcggattg ctggcaggtt
    26761 ttgcacgcac cttcggtggt tggatagcca accacgtcgc gctggtcttt attgaagtga
    26821 tccgcggcac acctatcgtc gtccaggtga tgtttatcta tttcgccctg ccgatggcgt
    26881 ttaacgactt acgcatcgac ccatttactg cggcggtggt caccatcatg atcaactccg
    26941 gcgcgtacat tgcggaaatc acgcgtggtg cggtgctgtc tattcacaaa ggttttcgtg
    27001 aagcaggact ggcgctcggt ctttcacgtt gggaaaccat tcgctacgtc attttaccgc
    27061 tggcactgcg tcgtatgctg ccgccgctgg gtaaccagtg gatcatcagc attaaagaca
    27121 cctcgctgtt tattgttatc ggcgtggcgg aactgacccg tcaggggcaa gaaattattg
    27181 ccggtaactt ccgcgccctt gagatctgga gcgccgtggc ggtgttctat ctgattatta
    27241 ccctggtgct gagctttatt ctgcgtcgtc tggaaagaag gatgaaaatc ctgtgattga
    27301 atttaaaaac gtctccaagc actttggccc aacccaggtg ctgcacaata tcgatttgaa
    27361 cattgcccag ggcgaagtcg tggtgattat cgggccgtcc ggttccggta aatcgaccct
    27421 gctgcgctgc atcaacaaac tggaagaaat cacctccggc gatctgattg tcgatggcct
    27481 gaaggttaac gatccgaaag ttgacgagcg cctgattcgc caggaagcag gtatggtgtt
    27541 ccagcagttt tacctcttcc cgcatctgac ggcgctggaa aacgtcatgt ttggtccgct
    27601 acgcgtgcgt ggcgcgaaca aagaagaggc ggaaaaactg gcgcgtgagc tgctggcgaa
    27661 agtcggtctg gcagaacgtg cacatcacta cccttccgaa ctttctggtg gtcaacagca
    27721 gcgtgtggcg attgcccgcg cgctggcggt gaagccgaaa atgatgctgt ttgatgaacc
    27781 gacttccgct cttgacccgg aactgcgcca tgaagtgctg aaggttatgc aggatctggc
    27841 tgaagaaggg atgacgatgg tgatcgtgac ccacgaaatc ggttttgccg agaaagtagc
    27901 ttcgcggctg atctttatcg acaaaggccg gattgcggaa gatggcaatc cgcaggtgtt
    27961 gatcaagaac ccgccgagcc agcgcttgca ggaatttttg cagcacgtct cttaataaga
    28021 cacattgcct gatgcgctac gcttatcagg cctacaggat atctggcaac ttattaaaat
    28081 tgcatgaact tgtaggacgg ataaggcgtt cacgccgcat ccggcaaaaa agcccgcacg
    28141 ttgtcagcaa tctgcttaat atcccttcct ccctttcacc cgaaagggag gcacaccaga
    28201 ttcctctcat ttaaaatcgc ccc
//
LOCUS       DADMIB010000038        27862 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.038, whole genome shotgun sequence.
ACCESSION   DADMIB010000038 DADMIB010000000
VERSION     DADMIB010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27862
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.038"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..527
                     /locus_tag="JNZ89_001567"
     CDS             <1..527
                     /locus_tag="JNZ89_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HAY8935481.1"
                     /translation="KYKIMANHHGIIFDEQRKRYIIGSITVSIDEMTNALDPVELAEI
                     INKKHHAVINGKKFKNSRAISCRSFNRYFSVSTDYRPKLEALLACSQMLGINQVVAHN
                     GNGGRECIGETGTVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHEKNRN
                     GLMPLIRRRTMLQL"
     gene            893..1960
                     /locus_tag="JNZ89_001568"
     CDS             893..1960
                     /locus_tag="JNZ89_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY8935482.1"
                     /translation="MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIE
                     ATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVA
                     AAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISAQQLDDDRAAA
                     ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPR
                     DGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAP
                     DLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGV
                     AWVRVNEELPWPDDLVVRLPQ"
     gene            1957..4692
                     /gene="rbbA"
                     /locus_tag="JNZ89_001569"
     CDS             1957..4692
                     /gene="rbbA"
                     /locus_tag="JNZ89_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated ATPase/putative transporter
                     RbbA"
                     /protein_id="HAY8935483.1"
                     /translation="MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLI
                     GPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYH
                     TLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCC
                     ALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWL
                     VAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIA
                     IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAW
                     LFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMS
                     ERFKLNDVEDVLPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM
                     VDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI
                     AYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALM
                     GTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDEL
                     DRRMRAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWL
                     QDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSTLSVVR
                     EKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTL
                     TLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGR
                     WIGEVYPTSHFLTIARGTFSKALDLTDMWQLFIPLLIAIPLVMGLSILLLKKQEG"
     gene            4692..5816
                     /locus_tag="JNZ89_001570"
     CDS             4692..5816
                     /locus_tag="JNZ89_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709253.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 transporter permease"
                     /protein_id="HAY8935484.1"
                     /translation="MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTP
                     GSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIP
                     PNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
                     LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPF
                     EIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIF
                     MGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAI
                     LYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA"
     gene            5889..6163
                     /locus_tag="JNZ89_001571"
                     /pseudo
     CDS             5889..6163
                     /locus_tag="JNZ89_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312384.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
     gene            6160..6519
                     /locus_tag="JNZ89_001572"
     CDS             6160..6519
                     /locus_tag="JNZ89_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HAY8935485.1"
                     /translation="MIKLKTPNSMEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSD
                     SIQGLQKEGELSLLEYLEDCKAAGIEPYARTEKIKTFTLRYPESLSERLNNAAAQQQV
                     SVNTYIIETLNERLNHL"
     gene            complement(6639..7040)
                     /gene="nikR"
                     /locus_tag="JNZ89_001573"
     CDS             complement(6639..7040)
                     /gene="nikR"
                     /locus_tag="JNZ89_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HAY8935486.1"
                     /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
                     TQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
                     GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
     gene            complement(7046..7852)
                     /gene="nikE"
                     /locus_tag="JNZ89_001574"
     CDS             complement(7046..7852)
                     /gene="nikE"
                     /locus_tag="JNZ89_001574"
                     /EC_number="7.2.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikE"
                     /protein_id="HAY8935487.1"
                     /translation="MTLLNVSGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALL
                     GRSGCGKSTLARLLVGLESPSQGNISWRGESLAKLNRAQRKAFRRDIQMVFQDSISAV
                     NPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRV
                     CLARALAVEPKLLILDETVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERF
                     CQRVMVMDNGQIVETQAVGDKLTFSSDAGRVLQNAVLPAFPVRRRATEKV"
     gene            complement(7849..8613)
                     /gene="nikD"
                     /locus_tag="JNZ89_001575"
     CDS             complement(7849..8613)
                     /gene="nikD"
                     /locus_tag="JNZ89_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikD"
                     /protein_id="HAY8935488.1"
                     /translation="MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSL
                     TCAATLGILPAGVRQTAGEILADGKAVYPCALRGIKIATIMQNPRSAFNPLHTMHTHA
                     RETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESP
                     FIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGK
                     IVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS"
     gene            complement(8613..9446)
                     /gene="nikC"
                     /locus_tag="JNZ89_001576"
     CDS             complement(8613..9446)
                     /gene="nikC"
                     /locus_tag="JNZ89_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikC"
                     /protein_id="HAY8935489.1"
                     /translation="MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSH
                     LLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGR
                     VDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISL
                     RQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVSGMSFLGLGVT
                     APTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHA
                     H"
     gene            complement(9443..10387)
                     /gene="nikB"
                     /locus_tag="JNZ89_001577"
     CDS             complement(9443..10387)
                     /gene="nikB"
                     /locus_tag="JNZ89_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikB"
                     /protein_id="HAY8935490.1"
                     /translation="MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNL
                     PPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATL
                     ELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSV
                     YLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLND
                     KQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV
                     IQFFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA"
     gene            complement(10387..11961)
                     /gene="nikA"
                     /locus_tag="JNZ89_001578"
     CDS             complement(10387..11961)
                     /gene="nikA"
                     /locus_tag="JNZ89_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter, nickel/metallophore
                     periplasmic binding protein"
                     /protein_id="HAY8935491.1"
                     /translation="MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLY
                     TPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKLSNGEPFD
                     AEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
                     FRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITF
                     NVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN
                     TAKTPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDP
                     QKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGAD
                     VSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADK
                     PLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYA
                     PIATEIPFEQIKPVKP"
     gene            complement(12072..12659)
                     /gene="acpT"
                     /locus_tag="JNZ89_001579"
     CDS             complement(12072..12659)
                     /gene="acpT"
                     /locus_tag="JNZ89_001579"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase AcpT"
                     /protein_id="HAY8935492.1"
                     /translation="MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHT
                     LSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWR
                     WLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS
                     LSVSHCQLENLSLAICTPTPFTLTADSVQWIDSVN"
     gene            complement(12714..13763)
                     /locus_tag="JNZ89_001580"
     CDS             complement(12714..13763)
                     /locus_tag="JNZ89_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HAY8935493.1"
                     /translation="METPQPDKTGMHILLKLASLVVILAGIHAAADIIVQLLLALFFA
                     IVLNPLVTWFIRRGVQRPVTITIVVVVMLIALTALVGVLAASFNEFISMLPKFNKELT
                     RKLFKLQEMLPFLNLHMSPERMLQRMDSEKVVTFTTALMIGLSGAMASVLLLVMTVVF
                     MLFEVRHVPYKMRFALNNPQIHIAGLHRALKGVSHYLALKTLLSLWTGVIVWLGLALM
                     GVQFALMWAVLAFLLNYVPNIGAVISAVPPMIQVLLFNGVYACILVGALFLVVHMVIG
                     NILEPRMMGHRLGMSTMVVFLSLLIWGWLLGPVGMLLSVPLTSVCKIWMETTKGGSKL
                     AILLGPGRPKSRLPG"
     gene            13895..15112
                     /locus_tag="JNZ89_001581"
     CDS             13895..15112
                     /locus_tag="JNZ89_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417930.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8935494.1"
                     /translation="MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYV
                     HDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLT
                     AGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
                     GAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLG
                     RVWLYGMALALASAGFGVIATFITLFYDAKSWDGAAFALTLFSCAFVGTRLLFPNGIN
                     RIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVP
                     QQNQVAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVAIALLLTWRLKK
                     RPPEHVPEAASSS"
     gene            complement(15116..15673)
                     /gene="dcrB"
                     /locus_tag="JNZ89_001582"
     CDS             complement(15116..15673)
                     /gene="dcrB"
                     /locus_tag="JNZ89_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417929.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage sensitivity protein DcrB"
                     /protein_id="HAY8935495.1"
                     /translation="MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAENNATGNPVN
                     LLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKR
                     LEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
                     ITLPADDQQKAQTTAENIINTLVIQ"
     gene            complement(15746..16411)
                     /locus_tag="JNZ89_001583"
     CDS             complement(15746..16411)
                     /locus_tag="JNZ89_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HAY8935496.1"
                     /translation="MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTW
                     GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALA
                     HFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF
                     IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINAL
                     QAS"
     gene            16632..16877
                     /gene="tusA"
                     /locus_tag="JNZ89_001584"
     CDS             16632..16877
                     /gene="tusA"
                     /locus_tag="JNZ89_001584"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HAY8935497.1"
                     /translation="MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIAD
                     DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG"
     gene            complement(16979..19177)
                     /gene="zntA"
                     /locus_tag="JNZ89_001585"
     CDS             complement(16979..19177)
                     /gene="zntA"
                     /locus_tag="JNZ89_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase
                     ZntA"
                     /protein_id="HAY8935498.1"
                     /translation="MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSSPTLSEN
                     VSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVES
                     AVQKAGYSLRDEQAADEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATT
                     LVGLYPIAHQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
                     WAASRARQGVSALMALKPETATRLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLL
                     SPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIE
                     EAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGC
                     PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTA
                     IHPATGISESELLTLAAAVEQSATHPLAQAIVREAQVAALAIPAAESQRALVGSGIEA
                     QVNGERVLICAAGKHPADAFAGLINELESAGQTVVLVVRNDDVLGIIALQDTLRADAA
                     TAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEYKVKAVTELNQHAPLA
                     MVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANI
                     RQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR"
     gene            complement(19251..19877)
                     /locus_tag="JNZ89_001586"
     CDS             complement(19251..19877)
                     /locus_tag="JNZ89_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000964717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HAY8935499.1"
                     /translation="MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQ
                     APMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSF
                     FWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
                     AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYF"
     gene            20018..20377
                     /locus_tag="JNZ89_001587"
     CDS             20018..20377
                     /locus_tag="JNZ89_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HAY8935500.1"
                     /translation="MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVV
                     VSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDK
                     GTLSYKGTRFVSFVGEQ"
     gene            complement(20380..20649)
                     /locus_tag="JNZ89_001588"
     CDS             complement(20380..20649)
                     /locus_tag="JNZ89_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1145 family protein"
                     /protein_id="HAY8935501.1"
                     /translation="MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMH
                     GMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFKVKK"
     gene            complement(20639..21235)
                     /gene="rsmD"
                     /locus_tag="JNZ89_001589"
     CDS             complement(20639..21235)
                     /gene="rsmD"
                     /locus_tag="JNZ89_001589"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase"
                     /protein_id="HAY8935502.1"
                     /translation="MKKPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLF
                     NWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN
                     ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV
                     ENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD"
     gene            21385..22878
                     /gene="ftsY"
                     /locus_tag="JNZ89_001590"
     CDS             21385..22878
                     /gene="ftsY"
                     /locus_tag="JNZ89_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HAY8935503.1"
                     /translation="MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEP
                     AKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETP
                     EPVAIEREELPLPEDVNAEEVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELEAQAL
                     AAEAAEEAVMVVPPVEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLF
                     RGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMG
                     EILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFELQGKSVMLAAGDTFRA
                     AAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH
                     LMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDG
                     TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
     gene            22881..23549
                     /gene="ftsE"
                     /locus_tag="JNZ89_001591"
     CDS             22881..23549
                     /gene="ftsE"
                     /locus_tag="JNZ89_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HAY8935504.1"
                     /translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
                     LKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
                     PLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLL
                     ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGG
                     VGHE"
     gene            23542..24600
                     /gene="ftsX"
                     /locus_tag="JNZ89_001592"
     CDS             23542..24600
                     /gene="ftsX"
                     /locus_tag="JNZ89_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HAY8935505.1"
                     /translation="MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKP
                     VNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAA
                     TQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
                     ALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALT
                     GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGG
                     ALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTNFDINGLSFDECLLLLLVCSMIG
                     WVAAWLATVQHLRHFTPE"
     gene            24845..25699
                     /gene="rpoH"
                     /locus_tag="JNZ89_001593"
     CDS             24845..25699
                     /gene="rpoH"
                     /locus_tag="JNZ89_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007899894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HAY8935506.1"
                     /translation="MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYH
                     GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
                     SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
                     LGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWE
                     EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
                     KLRAAIEA"
     gene            25970..27073
                     /locus_tag="JNZ89_001594"
     CDS             25970..27073
                     /locus_tag="JNZ89_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY8935507.1"
                     /translation="MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQ
                     EFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVK
                     PQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENID
                     FVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYD
                     QVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDT
                     VMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK"
     gene            complement(27272..27655)
                     /gene="panM"
                     /locus_tag="JNZ89_001595"
     CDS             complement(27272..27655)
                     /gene="panM"
                     /locus_tag="JNZ89_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase autocleavage activator
                     PanM"
                     /protein_id="HAY8935508.1"
                     /translation="MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARF
                     NERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGV
                     EDRGVMTAFMQALGFTAQQGGWEKR"
BASE COUNT         6595 a         7229 c         7743 g         6295 t
ORIGIN      
        1 ccaaatacaa aataatggca aatcatcatg ggataatttt tgatgagcag cgaaaacgtt
       61 acattatagg atcgataaca gtctctattg atgaaatgac caatgctctc gatccggtcg
      121 aattagcgga aattattaat aaaaagcacc atgctgtaat taatggcaaa aagtttaaaa
      181 atagccgggc tatctcttgt cgatccttta atcgttattt ttctgtttcg acagattaca
      241 gacctaaact tgaagcacta ttagcatgct cacaaatgtt aggtataaat caagttgttg
      301 cacataacgg taatggtgga agagaatgta taggtgaaac ggggacagtt ttaggtctta
      361 acgcccgtga cagtaaacat gctggaagaa tgttcagcat gcataattgc caaattaacc
      421 ctggtgcagg gcctgagata accactccct ggaagtctta ccagcatgaa aaaaacagaa
      481 atggacttat gcctttgatt agaaggcgca caatgttaca gctctgaacc atagacaaca
      541 tgaatattaa tgttactatc tggttgagac tgttgataaa acgtaaaaag gaatgctctg
      601 ttcctgcaac tgaacaggcg tgaaacgcga tccaacagga tggataccgt tttgtcagcc
      661 agttttatag atcacactta tgagtatgcg tgtttcattt acggccagga atgctgatga
      721 tgacaacatt actacccgtt ttcactaagc cttccccgtt ggcgctcaat gctctgcgcg
      781 ctggtcgtat ttgtcgtttc cttcttatcc cggatggaag aatccgctga acgtcgttcg
      841 gcggcagttg taacacgcgt cgtttgctta cagggattat ggcgggccga ttatggataa
      901 gagtaagcgc catctggcgt ggtgggttgt cggggcactg gcggtggctg ccgtcgtggc
      961 gtggtggctg ttgcgcccgg cgggtgtgcc ggaaggcttt gctgtcagca atgggcgcat
     1021 tgaagcgacg gaagtggata tcgccagcaa aattgccggg cgtatcgaca ccattctggt
     1081 gaaagaaggc cagtttgttc gcgaaggtga agtgctggcg aagatggata ctcgtgtgtt
     1141 gcaggaacag cgactggaag ccatcgcgca aatcaaagag gcacaaagcg ccgttgccgc
     1201 cgcgcaggct ttgctggagc aacgacaaag cgaaactcgc gccgcgcagt cgctggttaa
     1261 tcaacgccag gcagaactgg actccgtagc aaaacgtcat atgcgttccc gttcactggc
     1321 ccaacgaggg gctatttctg cgcaacagct ggatgacgac cgcgccgccg ctgagagcgc
     1381 ccgagctgcg ctggaatcgg caaaagctca ggtttctgct tctaaagccg ctatagaggc
     1441 ggcacgtacc aatatcattc aggcgcaaac ccgcgtcgaa gcggcacaag ccactgaacg
     1501 gcgcattgcc gcagatatcg atgacagcga actgaaagcc ccgcgtgacg gacgcgtgca
     1561 gtatcgggtt gccgagccag gggaagtgct ggcggcaggc ggtcgggtgc tgaatatggt
     1621 cgatctcagc gacgtctata tgactttctt cctgccaacc gaacaggcgg gcacgctaaa
     1681 actgggcggt gaagcacggc tgatcctcga tgccgcgcca gatctgcgta ttccggcgac
     1741 catcagtttt gtcgccagcg tcgcccagtt cacgccaaaa accgtcgaaa ccagcgatga
     1801 acggctgaaa ctgatgttcc gcgtcaaagc gcgtatccca ccggaattac tccagcagca
     1861 tctggaatat gtcaaaacgg gcttgccggg cgtagcgtgg gtgcgggtga atgaagaact
     1921 tccgtggcct gacgacctgg tggtgaggtt gccgcaatga cgcatctgga actggttccc
     1981 gtcccgcctg tcgcgcaact ggcgggcgtg agccagcatt atggaaaaac cgttgcgctg
     2041 aacaatatca ctctcgatat tccggcccgc tgtatggtcg ggctgattgg cccggacggc
     2101 gtcgggaagt cgagtttgtt gtcgttgatt tccggtgctc gtgtcattga gcagggcaat
     2161 gtgatggtgc tgggcggcga tatgcgcgac ccgaagcatc gccgcgacgt ctgcccgcgc
     2221 atcgcctgga tgccgcaggg gctgggcaaa aacctctacc acaccttgtc ggtgtatgaa
     2281 aacgtcgatt ttttcgcccg cctgttcggt cacgacaaag cggagcggga agtgcgaatt
     2341 aatgagctgc tgaccagcac ggggttagca ccgtttcgcg atcgtccggc agggaaactc
     2401 tccggcggga tgaagcaaaa acttgggctg tgctgcgcgt taatccacga cccggaactg
     2461 ttgatccttg atgagccaac aacgggggtt gacccgctct cccgcgccca gttctgggat
     2521 ctgatcgaca gtattcgcca gcggcagagc aatatgagcg tgctggtcgc caccgcctat
     2581 atggaagagg ccgaacgctt cgactggctg gtagcgatga atgccggaga agtgctggca
     2641 accggcagcg ccgaagagct gcggcagcaa acgcaaagcg ccacgctgga agaagcattt
     2701 attaatctgt taccgcaagc gcaacgccag gcgcatcagg cggtagtgat cccaccgtat
     2761 caacctgaaa acgcagagat tgccatcgaa gcgcgcgatc tgaccatgcg ttttggttcc
     2821 ttcgttgccg ttgatcacgt caatttccgc attccacgcg gggagatttt tggattcctt
     2881 ggttcgaacg gctgcggtaa atccaccacc atgaaaatgc ttaccggact gctgcccgcc
     2941 agcgaaggtg aggcgtggct atttgggcaa ccggttgatc caaaagatat cgatacccgc
     3001 cgtcgtgtgg gctatatgtc gcaggcgttt tcgctctata acgaactcac cgtgcggcaa
     3061 aacctggagt tacatgcccg tttgtttcac atcccggaag cggaaattcc cgcgcgagtg
     3121 gctgaaatga gcgagcgttt taagctcaac gacgttgaag atgttctgcc ggagtcattg
     3181 ccgctcggca ttcgccagcg gctttcgctg gcggtggcgg tgattcatcg cccggagatg
     3241 ttaatcctcg atgagcctac ttctggtgtc gatccggtgg cgagggatat gttctggcag
     3301 ttgatggtcg atctctcgcg ccaggacaaa gtgactatct tcatctccac ccactttatg
     3361 aacgaagcgg aacgttgcga ccgcatctca ctgatgcacg ccggaaaagt gcttgccagc
     3421 ggtacaccgc aggaactggt tgagaaacgc ggagccgcca gtctggaaga ggcatttatc
     3481 gcctatttgc aggaagcggc agggcagagc aacgaagccg aagcgccgcc cgtggtacac
     3541 gacaccaccc acgcgccgcg tcagggattt agcctgcgcc gtctgtttag ctacagccgc
     3601 cgcgaagcgc tggaactgcg acgcgatcca gtacgttcga cgctggcgct gatgggaacg
     3661 gtgatcctga tgctgataat gggttacggc atcagtatgg atgtggaaaa cctgcgcttt
     3721 gcggtgctcg accgcgacca gaccgtcagt agccaggcgt ggacactcaa cctctccggt
     3781 tcccgttact ttatcgaaca gccgccgctc accagttatg acgagcttga tcgtcggatg
     3841 cgtgcgggcg atatcacggt ggcgattgag atcccgccca atttcgggcg cgatatcgcg
     3901 cgtggtacgc ctgtggaact cggcgtctgg atcgacggag cgatgcccag tcgtgccgaa
     3961 acggtaaaag gttacgtgca ggcaatgcac cagagttggc ttcaggatgt ggcgagccga
     4021 caatcgacac ccgccagcca aagcgggctg atgaacattg agacgcgtta tcgctataac
     4081 ccggacgtaa aaagcctgcc agcaattgtt ccggcggtga tcccgcttct gctgatgatg
     4141 atcccgtcaa tgctaagcac ccttagcgtg gtgcgggaaa aagagcttgg gtcgattatc
     4201 aacctttacg tgacccccac cacgcgtagt gaatttttgc ttggtaaaca gttgccatac
     4261 atcgcgctgg ggatgctgaa ctttttcctg ctctgcggcc tgtcggtgtt tgtgtttggc
     4321 gtaccgcata aaggcagttt cctgacgctc accctggcgg cgctgctgta tatcatcatt
     4381 gccaccggaa tggggctgct gatctccacc tttatgaaaa gccagattgc cgccattttc
     4441 ggaacggcga ttatcacgtt gatcccggcg acacagtttt ccgggatgat cgatccggta
     4501 gcttcgctgg aagggcctgg acgttggatc ggcgaggttt acccgaccag tcattttctg
     4561 actatcgccc gcgggacgtt ctcgaaagcg ctggatctga ctgatatgtg gcaacttttt
     4621 atcccgttgc tgatagccat cccgctggtg atgggcttaa gtatcctgct gctgaaaaaa
     4681 caggagggat gatgcgccat ttacgcaata tttttaatct gggtatcaaa gagttgcgca
     4741 gtctgctcgg tgataaagcg atgctgacgc tgattgtctt ctcgtttacg gtgtcggtgt
     4801 attcgtcagc gaccgttacg ccaggatcgt tgaacctcgc gccgatcgcc attgccgata
     4861 tggatcaatc gcagttatcg aaccggatcg ttaacagctt ctatcgtccg tggtttttgc
     4921 caccggagat gatcaccgcc gatgagatgg atgccggact ggacgccgga cgctatacct
     4981 tcgcgataaa tattccgcct aattttcagc gtgatgtcct cgccggacgc cagccggata
     5041 ttcaggtgaa cgtcgatgcc acgcgcatga gccaggcatt taccggcaat gggtatatcc
     5101 agaatattat caacggtgaa gtgaacagct ttgtcgcgcg ctaccgtgat aacagcgaac
     5161 cgttggtatc gctggaaacc cggatgcgct ttaacccgaa ccttgatccc gcgtggtttg
     5221 gcggggtgat ggcgatcatc aacaacatta ccatgctggc gattgtattg accggatcgg
     5281 cgctgatccg cgagcgtgaa cacggcacgg tggaacactt actggtgatg ccgataacgc
     5341 cgtttgagat catgatggcg aagatctggt cgatggggct ggtggtgctg gtggtatcgg
     5401 gattatcgct ggtgctgatg gtgaaaggtg tactgggcgt accgattgaa ggctcgatcc
     5461 cgctgtttat gctgggcgtg gcgctcagtc tgtttgccac cacgtcaatc ggcattttta
     5521 tggggacgat agcgcgttca atgccgcaac tggggctgct ggtgattctg gtgctgctgc
     5581 cgctgcaaat gctttccggt ggatccacgc cgcgcgaaag tatgccgcag atggtgcagg
     5641 acattatgct gaccatgccg acgacacact ttgttagcct cgcgcaggcc attctctacc
     5701 ggggtgccgg attcgaaatc gtctggccgc agttcctgac gctgatggca attggcggcg
     5761 cgtttttcac cattgcgctg ctgcgattca ggaagacgat tgggacaatg gcgtaaggaa
     5821 gggaaacttg acttcatact gtgatgtcat actattgatg tcataaagtg aagtcataag
     5881 gacatgccat gagaaccaag gtacaggctt tacggaagaa acaaaaaata cattggatca
     5941 aatatttaaa actcctgttc ctcaagggat caagtggtct gatatagagt cactggttaa
     6001 agcattaggc ggagaaatta aggaaggaag aggttcgcgt tgtaagttca tactaaatat
     6061 gagcgttgcg tgtttccatc ggcctcatcc gtcgccagat accgataaag gcgctgtaga
     6121 aagcgtgcgt gactggttac taagtatagg ggtaaaacca tgatcaaact gaagacgcca
     6181 aactctatgg agattgccgg gcaaccagct gttattacct acgtgccaga actgaatgca
     6241 tttcgtggca aattcctggg cttgtcaggt tattgtgatt ttgtctctga cagcattcag
     6301 gggctgcaaa aagaagggga actttccctg ctagagtatc ttgaggattg taaagctgcg
     6361 ggtattgagc cgtatgcgcg tacagaaaag attaagacct ttacgttacg ctatccagaa
     6421 tcgctgagtg aacgccttaa taatgcggct gcgcagcaac aagtctctgt taatacctat
     6481 attattgaaa cactgaatga gcgtttgaat catttataaa ttttagcggc gtacattacg
     6541 cagaatatct gcctttacag gatctatcta tgcaactgaa cttaatttta taaattaagt
     6601 tcagttaata tcttttcttt cctcgtttca gaaataactc aatcttcctt cggcaagcac
     6661 tgcaaatgcc catgccgcac gccgcgctgg gcgataacgt catcggcaaa atgctgcacg
     6721 tcgcccatat cacctttcag cacggcgatt tccagacagt cgtcgtgatt gatatgcaca
     6781 tgcagcgtgg cgacggagag atcgtggtga tggtgctggg tggagacaat gcggctggct
     6841 aagtcgcgtt tttcgtgttc atacacatag gagagcaccg cgaaaccttg cgtgccgtgc
     6901 tgctgagtgg cctcctgggc cagggcgcta cgcagaatat cgcggatagc ttcggaacgg
     6961 ttgttataac cacgacgctg gctcaggctg tccagcgtct ccagtaaatc gtcatcaagc
     7021 gtgatggtga ctcgttgcat ttgcgttaaa ccttttctgt ggcgcgacgg cgcacgggga
     7081 atgcgggtaa taccgcgttt tgtagcacac gtccggcgtc agaggaaaag gttaatttat
     7141 ctcccaccgc ctgggtttcg acgatttgtc cgttgtccat caccatcacc cgctggcaaa
     7201 agcgttctac aagacgtaag tcgtgggtga tgaacaggca ggcggtgcca aactgttgtt
     7261 gcagcttttt cagcaggcga atgacgcccg cctgtaacac gagatcaagg ttagaaacgg
     7321 tttcatccag aatcagcaat ttcggttcga ccgccagcgc gcgtgccagg cagacgcgct
     7381 ggagctggcc gccgcttaac tgcggtgggc gtttgtcgag aacgctgtca tcgagatcga
     7441 ccgccttcag catttcgctg gcgcgcgcca gttgttcgga ttttttcagt gatagcaggt
     7501 ggcgcatcgg ttcacgcagg atctcgcgca cggttttgcg cggatttacg gcactgatgg
     7561 agtcctgaaa caccatctga atatcacggc ggaaggcttt acgttgggcg cgattaagtt
     7621 tcgccagcga ttcgccgcgc cagctaatat tcccttgtga gggagactct aagcctacca
     7681 gcagccgcgc gagggtgctt tttccgcagc cgctgcgtcc cagcagggcg acggtttcgc
     7741 cgcttttcag ggtcagggaa acgttattca gcaccgcctg atgttgatgt tttccgctaa
     7801 atccaccgtg ggcatagtga tgggaaaggc cgctgacgtt aagtaaggtc atgatgccag
     7861 ctccataccg tagagggcga gatgagcgga aaccaggctg cgcgtcaccg tatgtttggg
     7921 ggcgttaaac agcgtttcta catcgccctg ttcgacaatt ttaccttgtg acatcaccgc
     7981 cacgtcatcc gccagacgcg ccacaacgcc catatcatgg gtgaccagca gcattcccgg
     8041 cgcttgtttt tgcataatgc tttccagcag atcgaggatg cgcgcctgtg ctaccacgtc
     8101 gaggtcggtg gtcggttcat cggcgatgat aaacggtgat tcacacagca ccgccatcgc
     8161 aatcatcatg cgctgcaaca tgccgccgct catctcgaac gggtacagct tcagcacgcg
     8221 cgcggcgttt tccagcccca ccgcttctat ggcagcggta agcgtagcgt catcggcggg
     8281 tttccctaac gccaggcagg tttcccgcgc gtgggtgtgc atggtgtgta gcggattaaa
     8341 ggcgctgcgc gggttctgca tgatggtggc aattttgatg ccgcgcaggg cgcagggata
     8401 aaccgctttg ccatcggcta aaatttcccc cgccgtctgg cgaacgccag cgggcaaaat
     8461 gcccagcgtc gcggcgcagg ttaatgattt cccgctgccg ctaccgccga ctaacgccag
     8521 cacgcgcccg cgttgcaggg ttaacgatac accgtgtacc agcggctgcg cggcctgtag
     8581 cgcgatatta cgtagttcaa tctgttgcgg cattagtgtg cgtgctccgt caccagatga
     8641 gggtccagat gatcgcgcag tgcgtcaccc accaggttaa aggccatcac gctgataaac
     8701 agcgccagcc ccggccagaa catttgcagc ggctgggtcc agatatactg gcgcgcgtcg
     8761 ttaatcatca cgccccattc ggcggtcggc gcggtcacac cgaggccaag gaaagacatc
     8821 cccgagacgt gcagcatcat atggccgata tccagcgttg ccagcaccag cagcgaaggg
     8881 atcaccgcgc ctgccagatg atcgacaaac actcgcacat ggcccgcacc ggaaagccgt
     8941 gacgccagca caaactcgcg ttggcgtagt gaaatcacca ggctgcgcac catgcgtgca
     9001 taccacgccc agtgcgacag ggcgatggcg ataattacgt tggtcagccc ggtgccgagc
     9061 acgccaacca taaagaacga cagaatcgag gtcgggaagg tcataaacat atcggcgacg
     9121 cgcatggtgg cctgatcaac gcgcccgcca atcaacccgg cgctgccgcc aataaccagc
     9181 cctaatgtca gcaccagcag caggcaggcc attaccgaac cgagcgacac gcgggtcgct
     9241 gccatcagcc gcgagaaaat atcgcgacct aagtgatcgg tgcccagcca gtgctgcgca
     9301 tccggcgaaa gcaggtgcga cggcaaatca atcgcctggg ggtcatacgg cagccaccac
     9361 tggctggtga gcgcaatcag cgccagcagg gcgataatga tcagcgccag gcgtaccgac
     9421 cagcgggaag agaggaaaaa gttcacgcgt gcgctccttc atgacgacga atgcgcgggt
     9481 ccagcgcggc gttgagcaaa tcgacaatca aattacagac cacaaaaacc accaccatca
     9541 tcagcgtaaa gaactgaatc accggatagt cacggttaaa aatcgccgac accgcatagc
     9601 gcccgacgcc aggccaggca aagatgtttt cgataatcat cgtcccgcca atcaattcgc
     9661 caatgtgcat ccccacggcg gtgatcatcg gcagcgaggc attgcgcaga atatggcggc
     9721 gttcggtctg tttgtcattc aggccgcgta gccgcgccca ggtgacgtga cgctgaccgg
     9781 cgacgtccag catactggcg cgcagcagtc gcgcgttaat cgccagcgac ataaaggcga
     9841 tggaaaccgc aggcaaaatg atgtgctgcc agccgccgta gcccatcgcg ggtagccatt
     9901 gcagatacac cgaaaacgcc atcactagca aaaatgccag ccagaagttg ggcatcgaca
     9961 cgccaagaaa cgcgataaag cgcacggcga aatccggcaa acgatcgcgg tggcgcgccg
    10021 cccagatacc gagcggtacg gaagtgagca gaattaatac cagcgccgca cctgcaagtt
    10081 ccagcgtggc gggcaggaag ttcagcatat cgtccagcac cgggcgttgg ctggcgaatg
    10141 agataccaaa gtcaagatgc agcgccttcc acaaccaggt gccgtactgg acgtacagcg
    10201 gctgatccag tccgagcatg gtgcgggtag aggccagcat ctccggcgtc ggcggcaggt
    10261 tagacagacg caaataatcg agcgccgggt cgccggtacc gaggcgcagc atcagaaaaa
    10321 tgatcaccga ggcggcgagc accatcggga tcagcagcag aaagcggcgt aatacgtaac
    10381 gcaacattaa ggtttcaccg gtttaatctg ttcgaacgga atttcggtgg cgatcggcgc
    10441 gtaggggatg ttacccagct ccggttttga taccaccatc attgagatgt aactgatagg
    10501 cagataaacc gcctcgtcat gcagacgggt cagaatgtcg cgatacagcg cctgacgttg
    10561 cgtttcgtca tgggtcgcca gcacttcgcc gatctcttta tcaatcagcg gtttgtcggc
    10621 taatccttgc tgtgcctgga agtcagcgtg cgacggtacg cgcattgaac tcaggaaggc
    10681 gtgtggatcg tatggcgcgc cccaggtgcg gtggaaaatc atgccaaaac gaccgtcgcg
    10741 ctgacgagca tagatactgc tctcttcttc gccaatcagc gagacatctg cgccaatctg
    10801 gcgcatatca gcctgaatga tttccgccat cgatttgctt aacgcatcgg tgccgatgaa
    10861 cgacagttca atgcgcagcg gctgaccatt tttctcgcgg atgtctttgc ccgcaggcag
    10921 cgtccaaccg gctttttcca gcaacgcttt cgctttctgc ggatcgtact ggcgcggttt
    10981 caggccgagg ttggcgtagg gcacagaagg ggcaaacagg gtgtcggcga cctgctgggt
    11041 gccatacaac gcgttatcaa tcagcgattt tttgtttacc gcgtaattaa gagcttcacg
    11101 tactgccagc tcattggtgg gggttttggc ggtattaagc gccagcatca cggtttcgat
    11161 cggctgtgac agttgggtat ggtaagccgg gttctggcta aagcgggcga aggtatcgag
    11221 cggtaataac ccttcgtttc cgtacagcag gtcgatatcg ccagtttcaa acgccaccgc
    11281 gcgggtagtc gggtccggga tgacgttaaa ggtgatcttt ttaatcgctg gcttttcgcc
    11341 ccagtagttt tcgttacgga cgaagacatc gtactgattc agtttcgatt cctgcaaaat
    11401 ccacggtccg gtgccaatcg gcgctttaat tccgttcatg gtttcatggt ttttaaactg
    11461 cgagggagcg ataaaacgga aaggacgggg cagggccagt tcttgcagga aaggatagta
    11521 ggcgcttttc agggtaattt gcagctctgt tttactgagt gctttaacat caacaatctg
    11581 gtttgccagc tccagccagg cgtgacgttg acggttatcg agcactgcgc ggaagttttc
    11641 tgccgccgcc tcggcatcga acggttcacc gttggataat ttcacgtcat cacgcagggt
    11701 gaaggtccag gttttaccat cttctgaatg agtccagctt tttgccagcc acgggatcac
    11761 cgaaccgtct gcctgatatt tcaccaatgg ttcataaacc atgctctggg cgaacatctg
    11821 gttaggcgtg taaaggtgcg ggtttagtgg cccgacattc accggccagg cggtagtgat
    11881 ttcatctggt gcagcggcat ggacgataaa agacgcacaa gccagcagcg caaatagagt
    11941 gcggcggagt gtggagagca tgataacccc aatggattaa aatagatggc ggaaataagt
    12001 atgacgattt taagtattcg tcatactgat tacctgttct ggatcaatag atgggcagtc
    12061 gggtgggcgg atcagttaac tgaatcgatc cattgcacac tgtcggcggt gagcgtaaag
    12121 ggggtggggg tgcagatcgc aaggcttaaa ttttctagct gacaatggct gactgacagc
    12181 gaggagtgat aggtgctatc tacgctgacg atttgccagg cgctgccgcc acgctgttta
    12241 acgatggctt ctttgcgcgt ccagatgcgc cagaacattt ccagttgctg atcaggatgc
    12301 acggcgtcca tttcagcgtg ttccccgagg ctgaacacgg cgttcgccag ccagcgccag
    12361 ttggcgcgcg ggcgaatcac ttcgatatcg cagccgactt cgccttcatc gctcaacagc
    12421 agagcgatat cgtcaccgct atggcttaag ttgaaccata gcggcgtttc cggcgcgaat
    12481 gcaggtttgc cttgttcgcc atagatgatc tccggtagcg gggaaagcgt gtgcgaaagc
    12541 aatgcacgcc ccgccagcca gcgttcgcgt cgtggacctt gcggtgcttg ctcgcgtaaa
    12601 cccggtggca gtggagctgc gcttaaggtc gaaactttcc ccagaactat ccgatacata
    12661 tcagggccaa cgtttaatgg aaaatgaaag tgcgtatcgt atcacttgtc gcctcatccc
    12721 ggtaaccgac ttttcggtct gcctggcccc agtaaaatcg ccagtttgct accgcctttg
    12781 gtggtttcca tccagatttt acacacgctg gttaatggca ccgaaagtag catccctacc
    12841 gggccgagca gccatcccca aattaacaat gaaagaaata ccaccatggt ggacatcccc
    12901 aggcgatggc ccatcatccg tggttctaaa atattgccga tgaccatatg gaccactaaa
    12961 aacaatgcgc cgaccagaat acatgcgtaa acaccattaa acagcagcac ctgaatcatt
    13021 ggcggtacgg cggaaattac cgcgccgata ttgggcacgt agttgagcaa aaacgccagt
    13081 actgcccaca tcagcgcaaa ctgtacgccc attagcgcca gccccagcca gacgatgaca
    13141 cctgtccata aactgagtag cgtctttaac gccagataat gcgaaacgcc tttaagtgcg
    13201 cggtgtaatc ctgcgatgtg aatctgtggg ttattcagcg caaaacgcat tttgtaaggg
    13261 acgtggcgca cttcaaacag cataaaaact acggtcatca ccagcaaaag cacgctcgcc
    13321 attgccccgg aaagcccgat cattagcgct gtggtgaagg taaccacttt ttccgagtcc
    13381 atccgctgca gcattcgctc cggcgacata tgcaaattaa gaaaaggcaa catctcctgc
    13441 aatttaaaaa gtttgcgcgt cagctcctta ttaaacttcg gcagcataga gataaattcg
    13501 ttaaacgatg ccgccagtac gccgactagc gcggttagtg cgatcagcat caccaccact
    13561 acaatcgtaa tggtaacggg gcgttgtact ccccgacgaa taaaccaggt aacgagcggg
    13621 ttgaggacga tggcaaaaaa cagcgccagt aacagctgca caatgatatc tgccgctgcg
    13681 tgaatgcccg cgaggatcac taccagcgag gccaacttga gcagaatgtg catgcccgtt
    13741 ttatcgggtt gaggggtttc cattggggct tccttgtgac tttttgtgtt aagtgtagcg
    13801 ggagtcacgt cagcaatatt ctgattctta ctgctgattt tcacgtcagc acgtggtaaa
    13861 aatgaaacac tgttgtaaaa atgtggtgat cctcatgccc gaacccgtag ccgaacccgc
    13921 gctaaacgga ttgcgcctga atttgcgcat tgtctccatt gtcatgttta acttcgccag
    13981 ctacctcacc atcgggttgc cgctcgctgt attaccgggc tatgtccatg atgtgatggg
    14041 ctttagcgct ttctgggcag gattggttat cagcctgcaa tatttcgcca ccttgctgag
    14101 ccgtcctcat gccggacgtt acgccgattt gctgggcccc aaaaagattg tcgtcttcgg
    14161 tttatgcggc tgctttttga gcggtctggg atatctgacg gcaggattaa ccgccagtct
    14221 gcccgtcatc agcctgttat tactttgcct gggacgcgtg atccttggga ttgggcaaag
    14281 ttttgccgga acgggatcga ccctgtgggg cgttggcgtg gttggctcgc tgcatatcgg
    14341 gcgagtgatt tcgtggaacg gcattgtcac ttacggggcg atggcgatgg gtgcgccgtt
    14401 aggcgtcgtg ttttatcact ggggcggctt gcaggcgtta gcgttaatca ttatgggcgt
    14461 ggcgctggtg gccattttgt tggcgatccc gcgtccgacg gtaaaagcca gtaaaggcaa
    14521 accgctgccg tttcgcgcgg tgcttgggcg cgtctggctg tacggtatgg cactggcact
    14581 ggcttctgcc ggatttggcg tcatcgccac ctttatcacg ctgttttatg acgctaaaag
    14641 ttgggacggt gcggctttcg cgctgacgct gtttagctgt gcgtttgtcg gtacgcgttt
    14701 gttattccct aacggcatta accgtatcgg cggcttaaac gtagcgatga tttgctttag
    14761 cgttgagata atcggcctgc tactggttgg cgtggcgact atgccgtgga tggcgaaaat
    14821 cggcgtctta ctggcggggg cagggttttc gctggtgttc ccggcattag gtgtagtggc
    14881 ggtaaaagcg gttccgcagc aaaatcaggt ggcggcgctg gcaacttaca ccgtatttat
    14941 ggatttatcg cttggcgtga ccggaccact ggctgggctg gtgatgagct gggcgggcgt
    15001 accggtgatt tatctggcgg cggcgggact ggtcgcaatc gcgttattac tgacgtggcg
    15061 attaaaaaaa cggcctccgg aacacgtccc tgaggccgcc tcatcatctt aaaacttact
    15121 gaataaccag cgtattaatg atgttttctg cggtggtctg cgctttttgc tgatcgtcag
    15181 cgggcagcgt aatttgcatg gtcagcagtt gattacccac gttacccaga ataacggaag
    15241 agtacgccgt ctggcctttc gcggagataa tactgtctaa ctgctgcatt ttgtgacctt
    15301 tcagctcaat ggctttattg gttaccactt gcagctgcgg atcgcggcta cgttgctgat
    15361 cttccagacg cttcgccagc accgccagat cttctttcgg atcatcgccc atgatgacga
    15421 tgactgcttt ctgcccggtg gcgtcggacc agacatgcat gttattggcc tgcgttccca
    15481 gcttaccgct ctggtcggtc atatccgctg gcagcgagaa acttaacttg ccatcaagca
    15541 ggttgacggg attcccggta gcgttatttt ccgcgaccga accctgcgcc gtagcgttag
    15601 tgtctttatc atcacaggcc gcaagcccca taaccagcag gccaattccg acatatttaa
    15661 ccagattgcg cattgacttc ttcctttcga taaacggcca taacggctca ttcatccatc
    15721 ttatcacaac tctgataacg aacctttaac tcgcctgcaa agcgttgatt tcggatttat
    15781 ctgccagtct tttcaacagc atattgagta atacgccata cattggcagg aagaaaacga
    15841 tactgattaa cactttgaaa cagtaatcga ccagcgcgat ttccatccag tgttcagcca
    15901 taaaggcatc cgggctacgc cagaaggcaa tgaagaaaaa ggccagcgtg tcgctgacgt
    15961 taccgaacag tgtggacgct gtcggtgcca gccaccagcg gcgactctga cgcaggcggt
    16021 taaaaacgtg cacgtcgagg atctgtccca gcgcgtaggc catgaaactg gcggtggcga
    16081 tacgggcgac aaacaggttg aagtgggcga gtgcgccgaa tccctgccag gaacccatat
    16141 agaatagcga cgagatgacg taggagatca gcaacgccgg gatcatcacc gcaaagatga
    16201 tacgacgggc cagcggtgcg ccaaaaatac gcacggtcag gtcggtagca aggaaaataa
    16261 acgggaagct aaacgcgccc caggtggtat ggaaacccaa aatggagacg ggaagctgaa
    16321 ccagatagtt actggaggtg atcaccagca gatgaaataa cgataaccag aacaacgcct
    16381 tatagcgttg agtttgcgag aaaacgttca tattgtacct ttttgattaa ccattggggt
    16441 gagggaaccc aatacgtacg acacgtctgt taccttaaca taataacgtg cttacccttt
    16501 tttcgagccg ccgcatgata ctgctttacg ttgacaatgc aatggttaat tttcacgcaa
    16561 tcgttaacct ggtttgctta cggactcaca gggcgtaaac tagcgccgtt tttttatgtg
    16621 atgagaagaa aatgaccgat ctcttttcca gccctgacca cacactcgac gcacttggcc
    16681 tgcgctgccc ggaacccgta atgatggtgc gcaaaactgt gcgcaatatg cagcccggcg
    16741 aaacgttgct gattatcgcc gacgatccgg ccactacccg cgatattcct gggttttgta
    16801 cctttatgga acacgaactg gttgcgaaag agacggatgg actgccttat cgttatttga
    16861 ttcgtaaagg cggttgatgg gggctgattg gcttcgatgc cgccttttcc cctcacccta
    16921 accctctccc cagaggggcg aggggaccga tcgcgctcaa tgttgcgatc ggtttgcctt
    16981 atctcctgcg caacaatctt aacgcattcg ctgtcaccag caccgtcgca cccgtatctg
    17041 ccagcaccgc cagccatagt ccggtcatcc ctaaaagcgt ggtgacgagg aagatccctt
    17101 tcagtcccag cgcaatggtg atgttctggc ggatattggc gtgagtggcg cgtgccagtt
    17161 caatcatttg caccaggccg cgcaggtggt tatgggttaa tgctgcatca gcggtttcca
    17221 gcgccacgtc tgtgccactg cccattgcaa tcccaatggc ggcagctttc atcgctggcg
    17281 cgtcgttaat accgtcaccg accatcgcca gcggcgcatg ttgattcagc tcggtcaccg
    17341 ctttgacttt atattccggc aacaggcccg ctttaaattc cagccccagc tccccggcaa
    17401 ttgccgccgc tgcgcgtgga ttatcgccgg tgaggatcac ccctttgacg cccagcgcgt
    17461 tcagttcact gatggcagtt gcagcatcgg cgcgcagggt atcctgcaat gcaatgatac
    17521 ccagcacgtc atcattacgt actaccagca caaccgtttg cccggcgctt tccagttcat
    17581 taatcaaacc agcaaatgca tcagcgggat gtttcccggc agcgcatatc aacacgcgct
    17641 caccgttaac ctgcgcttca atgccagacc cgaccagcgc ccgctgtgat tcggcggcgg
    17701 gaatggcgag tgcagcaacc tgtgcttcgc gcacgatggc ctgcgccagt ggatgcgtcg
    17761 cgctttgctc gaccgccgcc gccagtgtca gcagttcaga ttcactaata cccgttgccg
    17821 gatgaatcgc ggtaacgcgc ggtttaccga cggtcagcgt accggtttta tcaaacgcca
    17881 cctgagtaac acgacctagt tgttccagcg ccgctccgcc tttaatcaac gccccacgac
    17941 gcgctgctgc cgccagcccg gaggtaatcg ccgcgggcgt ggagataact aacgcacacg
    18001 ggcagccaat cagcagcagc gtcaggcctt tataaatcca ctcctgccag ctggcggcaa
    18061 acagcagcgg tggcaccagc gtcaccagca gggcgacggc cataatcgct ggcgtataaa
    18121 tacggctgaa acggtcgata aaccgctcaa tgggggcgcg gcgctcttcg gcttcttcga
    18181 tcagtttcag aatccggtca atggcgctgg cacccggttc tgacagcact tccagcgtta
    18241 ccagacggtc tacgctggtg gctcctgcag gaactttatc gcccgtcgcg cgctccaccg
    18301 gaatggattc tccggtcagg gcgctttcat caaaactggc aaacggtgag agcagtttac
    18361 cgtcggcagg caaacgccca cctgcggcga cttcaatcac atcgccaggc cgcaggctgt
    18421 taatcgccac ctcttcccgc tcaccgttac gcaggcgcgt ggcggtttct ggtttcagcg
    18481 ccattaacgc gctaacgccc tgacgcgcgc ggctggcggc ccagccttcc agtcgttcac
    18541 caatcaaaaa cagcagcaac accatcgcag cttcagccgt tgcgccaata aacagtgcac
    18601 caatagcggc tacgctcatt aaggtttcaa tggcgaagta gctgccggat ttgatcagcc
    18661 gtaatgcctg atgagcaatc gggtacagcc caaccagcgt ggtcgcgata aacgccagtt
    18721 gcccgaacgg atgattgaac tgctccagac cccagctgat tgccatcatc acgattagtg
    18781 taatcagcgg cagattctct ttcaggcgcg atgcttgtgg ctcgtcggcg gcctgctcat
    18841 cgcgcaggga atagcccgct ttttgcaccg cagattcaac ttgtgcacga atgtcattgt
    18901 cggcatcaac caccagtttt tcggtggcga acaacacctg cacctgattc acacctgcaa
    18961 gctggcgcac ggcattttct accttgcgcg cacaggcggc gcagtccatg ccactgactt
    19021 tccagctata gcgggtgccg gagacgtttt cagagagcgt tggcgagctg gagcatgcgc
    19081 cgtcgcagca acagtcgttg gcgttctgta ccgtggttag cggtttgaac gcagcaaatt
    19141 gaggggcttt cttgccgtga ttgtcaggtg tcgacatggc atactccggt taagtttttt
    19201 ctcattaacc gaaggataca ctctggagtc gactccagag tcaagtttta tcagaaatac
    19261 agtgagcgga cgatgaggaa gtgaccggca aagtagcagg ccgcagcaat cgcgttatcc
    19321 gcacggaagc gtcggcgata gtggctcccc agccagacaa agttactgat aaacagcaac
    19381 gaagcgccaa caaacgcaga gagcgccgga gcggtcggac ggaagaacca cagttcacct
    19441 gccagccaca ccatcaccag cgtcatgccg ataaacgtgc agataggcca acgatactct
    19501 tccagccgcg tccagataat cgccagtaac agcgcaccca gaaccagcaa caccagtggc
    19561 agaggccaga agaaagagag cgtcatctga ctggcgaaat agatggtgta cagcaggtgc
    19621 gagaggaaaa acgcgccgat ggcgtacatc agacgttgac gtggcaacag ggttagcgca
    19681 tcgcccagca gtgaggcgca cagccctgcc agcaccagat agctaatggc gtcgaacatc
    19741 ggcgcttgcc aggccagtaa cagcaggaga agaagggtta acggtttaaa cacccagcgt
    19801 tgccaggttg gcccacgata cgatgcatcc acagatagcc atgcggaaag acagacagcg
    19861 ataaacgacc aaagcatctt agttccttga attcgttatt ttttcgtaag cggaatgcct
    19921 acggtcttgc ttccagttta gtggcgaggg tggacggatg acaacaccat aactagcagg
    19981 gtatgcttat ttccgcattt tccgatgagg gataaagatg agcaaaccac ctcttttctt
    20041 tattgttatc attggcttaa ttgtcgtcgc cgcatcgttt cgttttatgc aacagcgacg
    20101 ggaaaaagct gataatgata tggctccgct ccagcaaaag ctggtggtgg tgagcaacaa
    20161 gcgggaaaaa ccgattaacg atcgccgttc gcgccagcag gaagtgactc cggcaggcac
    20221 cagtatgcgc tatgaggcaa gcttcaaacc gcaaagcgga ggaatggagc agacgtttcg
    20281 cctcgacgcc cagcagtacc atgccctgac agtgggcgat aaaggtacgc tgagctataa
    20341 aggaacgcgc tttgttagct ttgttggcga acaataaggt tattttttaa ctttaaattt
    20401 cttctgccag accagcagtt caaacacgcc gaaaaggaaa atccgcacct tttcggcggt
    20461 ggtcatctgc gggccatctt tcggtaaagt ggatttcaat agcgccagct gcataccatg
    20521 catcagcacg gtaaaaatca gcgccacgtt aacgaaaata ttcagcgggc gcgggaaggg
    20581 atgcaccaga ttgaggatta aaaatcccca aacgcagagc attaacaaac gaccaatatt
    20641 aatcagcatc actttctcct tgtgcttcgc gttgatacag ccgataagcc acctgacccg
    20701 ccactttttc ccgatgtaat gaccagtttg ccggaacagt gggcagaccg ttttcgactt
    20761 cgctttcgac ataaatcagg gcttcgtcag ccagccagcc gttatcttcc agtaaattta
    20821 tcgtctcttc taacaagcca cggcggaacg gtggatcgac aaacacgata ttatgcggtg
    20881 tacctttttg cgccaggaat gacatcgcgt tgctgttcac cacgcgtgca ttgcctgctt
    20941 ttagtgtcgc cagattctta attaactgct gagaaaccgc gcgatccatc tcaatcaacg
    21001 tggcccccgc agcgtagcgc gataacgctt ccagtcccag cgcgccgctc ccggcgaagc
    21061 aatccagaca ttgggcgtca acaatgaccg gagccagcca gttaaacaat gtttcgcgta
    21121 cgcggtcggt ggtggggcgc agacctgggc tatcaggaac cgggagttta cggcctcgcc
    21181 actgcccgcc aataatgcgg atttggccgc tgccggaatg attcggtttt ttcatgataa
    21241 attgctcaat ccgccagata acacatactt gcaggcggtg atgtgaatta agttaagtga
    21301 tagactattt catcattttt ttagctgcta tgtacatagc gttaacgctg tgccatgaag
    21361 caacagcgag gagtgtagtc gcaaatggcg aaagaaaaaa aacgtggctt tttttcctgg
    21421 ctgggctttg gtcaaaaaga gcagaccccg gaaaaagaga cagaagttca gaatgaacaa
    21481 ccggttgtag aagaaatcgt tcaggcgcaa gagcctgcga aggcttctga acaagccgtc
    21541 gaagagcaac cgcaggcgca tactgaagcc gaggcggaaa cttttgctgc cgacgttgtg
    21601 gaagtcactg aacaggttgc tgaaagtgaa aaagcgcagc ctgaagcgga agtcgttgca
    21661 cagccggaac cggtcgtaga agaaacgccg gagccagtgg ctatcgaacg tgaagagctg
    21721 ccgttgccgg aagacgtcaa cgccgaagag gtttcgccag aagagtggca ggctgaagcg
    21781 gaaaccgtag agattgtcga agcggcggaa gaagaagcgg ctaaagaaga aatcaccgac
    21841 gaagagctgg aagcacaggc gctggctgcc gaagcggcag aagaggcggt gatggtggtt
    21901 cctccggtag aagagcagcc ggtggaagaa atcgctcagg agcaggaaaa accgaccaaa
    21961 gaaggtttct tcgcgcgcct gaaacgcagc ctgttaaaaa ccaaagaaaa tctcggttcc
    22021 ggatttatca gcctgttccg cggtaaaaaa atcgacgatg atctgtttga ggagctggaa
    22081 gaacagctgt tgatcgccga tgtgggcgtg gaaaccacac gtaaaattat caccaatctg
    22141 acggaaggcg catcccgcaa gcagcttcgt gatgccgagg cgctctatgg cctgctgaaa
    22201 gaagagatgg gcgagattct ggcgaaagtc gatgagccgc tgaatgttga aggtaaaacg
    22261 ccgttcgtga tcctgatggt gggcgtcaac ggtgtgggta aaactacgac gattggtaag
    22321 ctggcacgtc agtttgagct gcagggtaaa tcggtgatgc tggcggcggg cgatactttc
    22381 cgtgcagcag cggttgaaca gcttcaggtc tggggtcagc gcaacaatat tccggtgatt
    22441 gcccagcata ccggtgcgga ttccgcctct gttatcttcg acgccattca ggcagctaaa
    22501 gcgcgtaata tcgacgtcct gattgccgat accgccggac gcctgcagaa caaatcgcac
    22561 ctgatggaag agttgaagaa aatcgtccgc gtgatgaaga aactcgacgt tgaagcgccg
    22621 catgaagtta tgctgactat tgatgccagt accgggcaga atgcggtaag ccaggccaaa
    22681 ctgttccacg aagccgttgg cttaaccggc atcacgctaa cgaaactgga cggcacggcg
    22741 aaaggcgggg taattttctc ggtggctgac cagtttggta tccctatccg ctacattggt
    22801 gtcggcgaac gtattgagga tttgcgtccg tttaaggcgg acgactttat agaggcactt
    22861 tttgcccgag aggattaaca atgattcgct ttgaacatgt cagcaaggct tatctcggtg
    22921 ggagacaggc gctgcagggc gttacgttcc atatgcagcc gggtgagatg gcgtttctga
    22981 ccggtcattc cggcgcaggg aaaagtaccc tcctgaagct gatctgtggg attgagcggc
    23041 ccagcgccgg gaaaatctgg tttagcggcc atgacatcac gcgtctgaaa aaccgtgaag
    23101 ttccgtttct gcgccgccag attggcatga ttttccagga tcaccatcta ctgatggacc
    23161 gtactgtcta cgataacgtg gcgatcccgc tgattatcgc tggtgccagc ggtgacgata
    23221 ttcgtcgccg ggtgtcggcg gcactggata aagtcgggct actggacaaa gcgaagaact
    23281 tccctattca gctttccggc ggtgaacaac agcgtgttgg cattgcccgc gcggtggtga
    23341 ataagcccgc ggtactgctg gcggacgaac cgaccggtaa cctggacgac gcgttgtcgg
    23401 aagggattct acgtctgttt gaagagttta accgcgttgg ggtaaccgta ttgatggcaa
    23461 cgcacgacat caacctgatt tcacggcgtt cctatcgcat gctcaccctg agcgatggtc
    23521 acttgcatgg aggcgtgggc catgaataag cgcgatgcaa tcaatcatat tcggcagttt
    23581 ggtgggcgtc tggatcgctt ccgtaaatcg gtcggcggct caggcgacgg cggtcgtaac
    23641 gcaccgaaac gcgcgaaatc ctcgccaaaa ccggtaaatc gcaaaaccaa cgttttcaac
    23701 gaacaggtgc gctatgcctt ccacggcgca ttgcaggatc tgaaaagcaa accgttcgcc
    23761 acgtttttaa cggtgatggt tatcgccatc tccctgacgc tgcccagcgt ctgttatatg
    23821 gtgtacaaaa acgttaatca ggcggcgacg cagtattatc cgtcaccgca aatcactgtt
    23881 tacttgcaaa aaacgctgga cgatgacgcc gctgcgggcg tggtggcaca gttgcaggcc
    23941 gagcaaggcg tggagaaagt gaactatctt tctcgtgaag acgcactggg cgagttccgt
    24001 aactggtctg gttttggtgg tgcgctggat atgctggaag aaaacccgct tccggcagtg
    24061 gcggtggtga tcccgaaact cgattttcag gggacggaat cactcaatac gctgcgtgat
    24121 cgtatcacgc agattaacgg cattgacgaa gtgcggatgg atgacagctg gtttgcccgt
    24181 ctggcggcgt tgaccgggct ggtcgggcgc gtttcggcga tgatcggcgt gttgatggtg
    24241 gcggcagtgt tcctcgtcat cggcaacagc gtacgtctga gcatctttgc tcgccgtgac
    24301 tccatcaacg tgcagaaact gattggtgcg acggatggtt tcatccttcg cccgttcctg
    24361 tatggtggcg cactgctggg attttctggc gcattgttgt cattaatttt gtcagaaatt
    24421 ctggtgctgc gattgtcatc ggcggttgcg gaagtggcac aggttttcgg aacgaatttt
    24481 gatatcaatg gtttatcgtt cgatgaatgc ctgctattgc tgctggtatg ctcgatgatt
    24541 ggctgggtgg cagcgtggct tgccacggta caacatttac gccactttac gcctgaataa
    24601 taaaagcgtg ttatactctt tccctgcaat gggttccgta gcagggaaag agatcccgtt
    24661 gtctcttccc ggtatttcat ctctatgtca cattttgtgc gtaatttatt cacaagcttg
    24721 cattgaactt gtggataaaa tcacggtctg ataaaacagt gaatgataac ctcgttgctc
    24781 ttaagctctg gcacagttgt tgctaccact gaagcgccag aagatatcga ttgagaggat
    24841 ttgaatgact gacaaaatgc aaagtttagc tttagcccca gttggcaacc tggattccta
    24901 catccgggca gctaacgcgt ggccgatgtt gtcggctgac gaggagcggg cgctggctga
    24961 aaagctgcat taccatggcg atctggaagc agctaaaacg ctgatcctgt ctcacctgcg
    25021 gtttgttgtt catattgctc gtaattatgc gggctatggc ctgccacagg cggatttgat
    25081 tcaggaaggt aacatcggcc tgatgaaagc agtgcgccgt ttcaacccgg aagtgggtgt
    25141 gcgcctggtc tccttcgccg ttcactggat caaagcagag atccacgaat acgttctgcg
    25201 taactggcgt atcgtcaaag ttgcgaccac caaagcgcag cgcaaactgt tcttcaacct
    25261 gcgtaaaact aagcagcgtc tgggctggtt taaccaggat gaagtcgaaa tggtggcccg
    25321 tgaactgggc gtaaccagca aagacgttcg tgagatggaa tcacgtatgg cggcacagga
    25381 catgaccttt gatctgtctt ccgacgacga ttccgacagc cagccgatgg caccggtgct
    25441 ctatctgcag gataaatcat ctaactttgc cgacggcatc gaagatgata actgggaaga
    25501 gcaggcggca aaccgtctga ccgacgcgat gcaaggtctg gacgaacgca gccaggacat
    25561 catccgcgcg cgctggctgg acgaagacaa caagtccacg ttgcaggaac tggctgaccg
    25621 ttacggtgtt tccgctgaac gtgtacgcca gctggaaaag aacgcgatga aaaaactgcg
    25681 cgctgctata gaagcgtaat ttccgctatt aagcagagaa ccctggatga gagtccgggg
    25741 tttttgtttt ttgggcctct acaataatca attccccctc cggcaaaacg tcaatcccca
    25801 cgcagattgt taataaactg tcaaaatagc tattccaata tcataaaaat ggggtatgtt
    25861 ttagcagagt atgctgctaa agcacgggta gtcatgcata aaacgaaata aagtgctaaa
    25921 tcacaacacc acaacacacg taataaccag aagaatgggg attctcagga tgaatataaa
    25981 gggtaaagcg ttactggcag gatgtatcgc gctggcattc agcaatatgg ctctggcaga
    26041 agatattaaa gtcgcggtcg tgggcgcaat gtccggtccg gttgcgcagt acggtgacca
    26101 ggagtttacc ggcgcagagc aggcggttgc ggatatcaac gctaaaggcg gcattaaagg
    26161 caacaaactg caaatcgtaa aatatgacga tgcctgtgac ccgaaacagg cggttgcggt
    26221 ggcgaacaaa gtcgttaacg acggcattaa atatgtgatt ggtcacctct gttcttcatc
    26281 aacgcagcct gcgtctgata tctacgaaga cgaaggcatt ttaatgatca ccccagcggc
    26341 aaccgcgccg gagctgaccg cccgtggcta tcagctgatc ctgcgcacca ccggcctgga
    26401 ctccgaccag gggccgacgg cggcgaaata tattcttgag aaagtgaaac cgcagcgtat
    26461 tgctatcgtt cacgacaaac agcaatacgg cgaaggtctg gcgcgagcgg tgcaggacgg
    26521 cctgaagaaa ggcaatgcta acgtggtgtt ctttgatggt atcaccgccg gggaaaaaga
    26581 tttctcaacg ctggtggcgc gtctgaaaaa agagaatatc gacttcgttt actacggcgg
    26641 ttatcacccg gaaatggggc aaatcctgcg tcaggcacgc gcggcagggc tgaaaactca
    26701 gtttatgggg ccggaaggtg tggctaacgt ttcgctgtct aacattgcgg gcgaatcagc
    26761 ggaagggctg ctggtgacca agccgaagaa ctacgatcag gttccggcga acaaacccat
    26821 tgttgacgcc atcaaagcga aaaaacagga cccaagcggc gcattcgttt ggaccaccta
    26881 cgccgcgctg caatctttgc aggcgggcct gaatcagtct gacgatccgg ctgagatcgc
    26941 caaatacctg aaagcgaact ccgtggatac cgtgatgggt ccgctgacgt gggatgagaa
    27001 aggtgatctg aaaggctttg agttcggcgt atttgactgg cacgccaacg gcacggcgac
    27061 cgatgcgaag taatcattaa tcggcaactt tgggttgccg ccaaattgct aatatcgagt
    27121 acgttgcttc atgccggatg cggcgtaaac gccttatccg gcctacaaga tccaaagaaa
    27181 tcagtaaatt gcaacacaca ttgtaggcct gataagcgta gcgcatcagg caatttctcg
    27241 ttggtcatca cttttgaaat caacttgacg attaacgctt ctcccagccg ccctgttgcg
    27301 ccgtaaatcc cagtgcctgc ataaacgccg tcatcacacc gcgatcttcc acgcctgcat
    27361 ccgccatcca ccagcatgaa acgccaggat tgttacgcaa aacctcttcc agcagatatt
    27421 gccccacacc gcgacgtcgg gtgacttccc gcacacgcag ggaatccagt gctccctcgg
    27481 tgccgcttaa ggttacccgt acggcagcga gcaggcgctc gttaaaacgc gcggcgtaga
    27541 tacggtggtt atcgtcaacc tgtaaagagg aaggggaata ctccggccag atcttttgca
    27601 ggtcaatccg gtcctggtcg ctaaagtttt ctaatcgaat gatggtcagc ttcatgggta
    27661 acccgtgtaa atcacaaaag tggaaccagt gtagcgaaat aatttaatcg gaggctttct
    27721 cttttttatt tcttttggca ggtgattaat tttttaacag caataattac aaagttaaaa
    27781 cattagagaa tgaaaaatac ccagcataat cccctgaatg gtagtgaatt attccgccct
    27841 ttgtgccgtt attttatgct ga
//
LOCUS       DADMIB010000039        27574 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.039, whole genome shotgun sequence.
ACCESSION   DADMIB010000039 DADMIB010000000
VERSION     DADMIB010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27574
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.039"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..125
                     /locus_tag="JNZ89_001596"
     CDS             <1..125
                     /locus_tag="JNZ89_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935509.1"
                     /translation="SPSQWAAIGVLGSLLFGLLTYLTNLYFKIREDRRKAARGE"
     gene            130..480
                     /locus_tag="JNZ89_001597"
     CDS             130..480
                     /locus_tag="JNZ89_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HAY8935510.1"
                     /translation="MTQNYKLIVKGIRNFENKVTVTLALRDKKRFDGEIFDLDISLDR
                     VEGAALEFYEAAARRSIRQVFLDVAAGLCEGDEQSPEKRPVILEAQNVWITYKGKLPG
                     RITGSLKTPPESQP"
     gene            544..1077
                     /locus_tag="JNZ89_001598"
     CDS             544..1077
                     /locus_tag="JNZ89_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY8935511.1"
                     /translation="MNAKIRYGLSAAVLALIAAGAPAPDILDQFLDEKEGNHTTAYRD
                     GAGIWTICRGAILVDGKPVVPGMKLSKEKCDRVNAIERDKALAWVEKNIRVPLSEPQK
                     AGIASFCPYNIGPGKCFPSTFYKRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VSRRDQESALACWGIDR"
     gene            1376..1813
                     /locus_tag="JNZ89_001599"
     CDS             1376..1813
                     /locus_tag="JNZ89_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysis protein"
                     /protein_id="HAY8935512.1"
                     /translation="MNRVLCVVIIALLVACGALSLGLNHYRDNAITYKEQRDKATSTI
                     ADMQKRQRDVAELDARYTKELADANATIESLRADVSAGRKRLQVAATCAKSTTGASGM
                     GNGESPRLTADAELNYYRLRSGIDKITAQVNYLQEYIRTQCLK"
     gene            2230..2850
                     /locus_tag="JNZ89_001600"
     CDS             2230..2850
                     /locus_tag="JNZ89_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000654791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sce7726 family protein"
                     /protein_id="HAY8935513.1"
                     /translation="MKDQDVRFAVHHKLLKESHLDPDSLVVDEFSISLGASRADIAVI
                     NGVIHGYELKSEYDSLERLPLQIKHYSSVMDKVTLVVAEKHLEGALKLIPGWWGVKTV
                     SVGPKGAILIKHMRGEKLNRNHDTLMLAQLLWKDECIDVLERWGYSKGIKSKPRFELW
                     NIIAENIPIANLRLEVRTALKKRVGWKVKAWQAESAPTNKAVSRLT"
     gene            complement(2792..3859)
                     /locus_tag="JNZ89_001601"
     CDS             complement(2792..3859)
                     /locus_tag="JNZ89_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001383880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935514.1"
                     /translation="MSQHQYYPQLKWKPAEYESLMLLDQTTLSGFTPIITIPDIDWDY
                     ENECYKKSLSSYLSDFGINLAASWKANRPVLLDVKYLDKHGSSRHHPLDMCIQDARVN
                     GKEIIPVVSPAYSTNYIHAVQRNLINGLAISITPQTWHQFTSLVNHLNIHPSLIDVII
                     DFGDIQNATDSLKQQALSMVNTLSGQAPWRNLILSSTAYPASQAGIPQHQVHHIPRHE
                     YDLWMYVVQNFSNGRTPSFSDYPTASSTITSVDPRFMSQYVSVRYSNDTSWIFVKGTA
                     VKGNGWGQTKNLCTTLVSSPEYQVFGSKFSWGDDYIYQRSLGANKSGGSKEWRKVAHT
                     HHITLVVRQLYWLAQTQPAKP"
     gene            4272..4817
                     /locus_tag="JNZ89_001602"
     CDS             4272..4817
                     /locus_tag="JNZ89_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-packaging protein"
                     /protein_id="HAY8935515.1"
                     /translation="MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSA
                     AVIKWYAERDAEIENEKLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNA
                     RDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMN
                     KAAALDELIPGLLSEYIEQSG"
     gene            4792..6717
                     /locus_tag="JNZ89_001603"
     CDS             4792..6717
                     /locus_tag="JNZ89_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HAY8935516.1"
                     /translation="MNISNSQVNRLRHFVRAGLRSLFRPEPQTAVEWADANYYLPKES
                     AYQEGRWETLPFQRAIMNAMGSDYIREVNVVKSARVGYSKMLLGVYAYFIEHKQRNTL
                     IWLPTDGDAENFMKTHVEPTIRDIPSLLALAPWYGKKHRDNTLTMKRFTNGRGFWCLG
                     GKAAKNYREKSVDVAGYDELAAFDEDIEQEGSPTFLGDKRIEGSVWPKSIRGSTPKVR
                     GTCQIERAASESPHFMRFHVACPHCGEEQYLKFGDKETPFGLKWTPDDPSSVFYLCEH
                     NACVIRQQELDFTDARYICEKTGIWTRDGILWFSSSGEEIEPPDSVTFHIWTAYSPFT
                     TWVQIVKDWMKTKGDTGKRKTFVNTTLGETWEAKIGERPDAEVMAERKEHYSAPVPDR
                     VAYLTAGIDSQLDRYEMRVWGWGPGEESWLIDRQIIMGRHDDEQTLLRVDEAINKTYT
                     RRNGAEMSISRICWDTGGIDPTIVYERSKKHGLFRVIPIKGASVYGKPVASMPRKRNK
                     NGVYLTEIGTDTAKEQIYNRFTLTPEGDEPLPGAVHFPNNPDIFDLTEAQQLTAEEQV
                     EKWVDGRKKILWDSKKRRNEALDCFVYALAALRISISRWQLDLSALLASLQEEDGAAT
                     NKKTLADYARALSGEDE"
     gene            6714..6920
                     /locus_tag="JNZ89_001604"
     CDS             6714..6920
                     /locus_tag="JNZ89_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lambda prophage-derived head-to-tail joining
                     protein W"
                     /protein_id="HAY8935517.1"
                     /translation="MTRQEELAAARAALHDLMTGKRVATVQKDGRRVEFTATSVSDLK
                     KYIAELEVQTGMTQRRRGPAGFYV"
     gene            6917..8518
                     /locus_tag="JNZ89_001605"
     CDS             6917..8518
                     /locus_tag="JNZ89_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HAY8935518.1"
                     /translation="MKTSTIPTLLGPDGMTSLREYAGYHGGGSGFGGQLRAWNPPSES
                     VDAALLPNFTRGNARADDLVRNNGYAANAIQLHQDHIVGSFFRLSHRPSWRYLGIGEE
                     EARAFSREVEAAWKEFAEDDCCCIDVERKRTFTMMIREGVAMHAFNGELFVQATWDTS
                     SSRLFRTQFRMVSPKRISNPNNTGDSRNCRAGVQINDSGAALGYYVSEDGYPGWMPQK
                     WTWIPRELPGGRASFIHVFEPVEDGQTRGANVFYSVMEQMKMLDTLQNTQLQSAIVKA
                     MYAATIESELDTQSAMDFILGANSQEQRERLTGWIGEIAAYYAAAPVRLGGAKVPHLM
                     PGDSLNLQTAQDTDNGYSVFEQSLLRYIAAGLGVSYEQLSRNYAQMSYSTARASANES
                     WAYFMGRRKFVASRQASQMFLCWLEEAIVRRVVTLPSKARFSFQEARSAWGNCDWIGS
                     GRMAIDGLKEVQEAVMLIEAGLSTYEKECAKRGDDYQEIFAQQVRETMERRAAGLKPP
                     AWAAAAFESGLRQSTEEEKSDSRAA"
     gene            8499..9818
                     /locus_tag="JNZ89_001606"
     CDS             8499..9818
                     /locus_tag="JNZ89_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HAY8935519.1"
                     /translation="MTAELRNLPHIASMAFNEPLMLEPAYARVFFCALAGQLGISRLT
                     DAVSGDSLTAQEALATLALSGDDDGPRQARSYQVMNGIAVLPVSGTLVSRTRALQPYS
                     GMTGYNGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALA
                     NDMNCSAGQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHK
                     VDGNPYSHLPDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVLDTEAAVYSGQEAID
                     AGLADELVNSTDAITVMRDALDARKSRLSGGRMTKETQSTTVSATASQADVTDVVPAT
                     EGENASAAQPDVNAQITAAVAAENSRIMGILNCEEAHGREEQARVLAETPGMTVKTAR
                     RILAAAPQSAQARSDTALDRLMQGAPAPLAAGNPASDAVNDLLNTPV"
     gene            9828..10160
                     /locus_tag="JNZ89_001607"
     CDS             9828..10160
                     /locus_tag="JNZ89_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HAY8935520.1"
                     /translation="MTSKETFTHYQPQGNSDPAHTATAPGGLSAKAPAMTPLMLDTSS
                     RKLVAWDGTTDSAAVGILAVAADQTSTTLTFYKSGTFRYEDVLWPEAASDETKKRTAF
                     AGTAISIV"
     gene            10216..11241
                     /locus_tag="JNZ89_001608"
     CDS             10216..11241
                     /locus_tag="JNZ89_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HAY8935521.1"
                     /translation="MSMYTTAQLLAANEQKFKFDPLFLRLFFRESYPFTTEKVYLSQI
                     PGLVNMALYVSPIVSGEVIRSRGGSTSEFTPGYVKPKHEVNPQMTLRRLPDEDPQNLA
                     DPAYRRRRIIMQNMRDEELAIAQVEEMQAVSAVLKGKYTMTGEAFDPVEVDMGRSAAN
                     NITQSGSTEWSKRDKSTYDPTDDIEAYALNASGVVNIIVFDPKGWALFRSFKAVREKL
                     DTRRGSHSELETAVKDLGKAVSYKGMYGDVAIVVYSGQYVENGVKKNFLPDNTMVLGN
                     TQARGLRTYGCIQDADAQREGINASARYPKNWVTTGDPAREFTMIQSAPLMLLADPDE
                     FVSVQLA"
     gene            11283..11678
                     /locus_tag="JNZ89_001609"
     CDS             11283..11678
                     /locus_tag="JNZ89_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001358136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-packaging protein FI"
                     /protein_id="HAY8935522.1"
                     /translation="MTKDELIVRLRSLGEQLNRDVSLTGTKEELALRVAELEEELDDT
                     DDAAGQDTPLRPENALTGHENEVVSAQTDTVTDAAALVTVVALVTLHTDALHATRDEP
                     VAFVLPETAFRVSAGVAAEMTERGLARMQ"
     gene            11690..12043
                     /locus_tag="JNZ89_001610"
     CDS             11690..12043
                     /locus_tag="JNZ89_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8935523.1"
                     /translation="MADFDNLFDAAIARADETIRGYMGTSATMTSGEQSGAVIRGVFD
                     DPENISYAGQGVRVEGSSPSLFVRTDEVRQLRRGDTLTIGEENFWIDRISPDDGGSCH
                     LWLGRGVPPAVNRRR"
     gene            12055..12633
                     /locus_tag="JNZ89_001611"
     CDS             12055..12633
                     /locus_tag="JNZ89_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8935524.1"
                     /translation="MAIKGLEQAVENLSRISKTAVPGAAAMAINRVASSAISQSASQV
                     ARETKVRRKLVKERARLKRATVKNPQARIKVNRGDLPVIKLGNARVVLSRRRRRKKGQ
                     RSSLKGGGSVLVVGNRRIPGAFIQQLKNGRWHVMQRVAGKNRYPIDVVKIPMAVPLTT
                     AFKQNIERIRRERLPKELGYALQHQLRMVIKR"
     gene            12630..13025
                     /locus_tag="JNZ89_001612"
     CDS             12630..13025
                     /locus_tag="JNZ89_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8935525.1"
                     /translation="MKHTELRAAVLDALEKHDSGATLFDGRPAVFDEEDFPAIAVYLT
                     GAEYTGEELDSDTWQAELHIEVFLPAQVPDSELDAWMESRIYPVMSDIPALSDLITSM
                     VASGYDYRRDDDAGLWSSADLTYVITYEM"
     gene            13033..13773
                     /locus_tag="JNZ89_001613"
     CDS             13033..13773
                     /locus_tag="JNZ89_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001605275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8935526.1"
                     /translation="MPVPNPTMPVKGAGTTLWVYKGSGDPYANPLSDVDWSRLAKVKD
                     LTPGELTAESYDDSYLDDKDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNE
                     GDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTA
                     ATGMTVTPASTSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKG
                     VAAGKVNIPVVSGNGELAVVAEITVTDS"
     gene            13789..14211
                     /locus_tag="JNZ89_001614"
     CDS             13789..14211
                     /locus_tag="JNZ89_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
                     /protein_id="HAY8935527.1"
                     /translation="MFLKTESFEYNGVSVTLSELSALQRIEHLALLKRQAEQAGSSLN
                     RQVSVEDLVRTGAFLVAMSLWHSHPQKTKMPSMNEAVKQIEQEVLTTWPTEAIAQAEN
                     VVMRLSGMSEFVVNDAPEQADDAGPAEPVSAGKCSTVS"
     gene            14193..14627
                     /locus_tag="JNZ89_001615"
     CDS             14193..14627
                     /locus_tag="JNZ89_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
                     /protein_id="HAY8935528.1"
                     /translation="MFDGELSFALKLAREMGRPDWRAMLAGMSSTEYADWHRFYSIHY
                     FHDVLLDMHFSGLTYTVLSLFFSDPDMHPLDFSLLNRREADEEPEDDVLMQKAAGLAG
                     GVRFGPDGNEVIPASPDVADMTEDDVMLMTVSEGIAGGVRYG"
     gene            14620..17181
                     /locus_tag="JNZ89_001616"
     CDS             14620..17181
                     /locus_tag="JNZ89_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8935529.1"
                     /translation="MAEPVGDLVVDLSLDAARFDEQMARVRRHFSGTESDAKKTAAVV
                     EQSMNRQALAAQKVGISVGQYKAAMRMLPAQFTDVATQLAGGQSPWLILLQQGGQVKD
                     SFGGMIPMFRGLAGAITLPMVGATSLAVATGALAYAWYQGNSTLSDFNKTLVLSGNQA
                     GLTADRMLVLSRAGQAAGLTFNQTSESLSALVKAGVSGEAQIASISQSVARFSSASGV
                     EVDKVAEAFGKLTTDPTSGLTAMARQFHNVTAEQIAYVAQLQRSGDEAGALQAANEAA
                     TKGFDDQTRRLKENMGTLETWADRTARAFKSMWDAVLDIGRPDTAQEMLIKAEAAFKK
                     ADDIWNLRKDDYFVNDEARARYWDDREKARLALEAARKKAEQQTQQDKNAQQQSDTEA
                     SQLKYTEEAQKAYERLQTPLEKYTARQEELNKALKDGKILQADYNTLMAAAKKDYEAT
                     LKKPKQSGVKVSAGDRQEDSAHAALLTLQAELRTLEKHAGANEKISQQRRDLWKAESQ
                     FAVLEEAAQCRQLSAQEKSLLAHKDETLEYKRQLAALGDKVTYQERLNALAQQADKFA
                     QQQRAKRAAIDAKSRGLTDRQAEREATEQRLKEQYGDNPLALNNVMSEQKKTWAAEDQ
                     LRGNWMAGLKSGWSEWEESATDSMSQVKSAATQTFDGIAQNMAAMLTGSEQNWRSFTR
                     SVLSMMTEILLKQAMVGIVGSIGSAIGGAVGGGASASGGTAIQAAAAKFHFATGGFTG
                     TGGKYEPAGIVHRGEFVFTKEATSRIGVGNLYRLMRGYATGGYVGTPGSMADSRSQAS
                     GTFEQNNHVVINNDGTNGQIGPAALKAVYDMARKGARDEIQTQMRDGGLFSGGGR"
     gene            17178..17507
                     /locus_tag="JNZ89_001617"
     CDS             17178..17507
                     /locus_tag="JNZ89_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8935530.1"
                     /translation="MKTFRWKVKPGMDVASVPSVRKVRFGDGYSQRAPAGLNANLKTY
                     SVTLSVPREEATVLESFLEEHGGWKSFLWTPPYEWRQIKVTCAKWSSRVSMLRVEFSA
                     EFEQVVN"
     gene            17507..18205
                     /locus_tag="JNZ89_001618"
     CDS             17507..18205
                     /locus_tag="JNZ89_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HAY8935531.1"
                     /translation="MQDIRQETLNECTRAEQSASVVLWEIDLTEVGGERYFFCNEQNE
                     KGEPVTWQGRQYQPYPIQGSGFELNGKGTSTRPTLTVSNLYGMVTGMAEDMQSLVGGT
                     VVRRKVYAHFLDAVNFVNGNSYADPEQEVISRWRIEQCSELSAVSASFVLSTPTETDG
                     AVFPGRIMLANTCTWTYRGDECGYSGPAVADEYDQPTSDITKDKCSKCLSGCKFRNNV
                     GNFGGFLSINKLSQ"
     gene            18211..18954
                     /locus_tag="JNZ89_001619"
     CDS             18211..18954
                     /locus_tag="JNZ89_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8935532.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVSTPEGERYFPCVNISGEPE
                     AYFRMSPEDWLQAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGTIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFYREDDWWRNGQNLYLDNLEAT
                     GLYQVPLSAAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHRAWRASAFTGIYNDLVAASTFV"
     gene            18891..19523
                     /locus_tag="JNZ89_001620"
     CDS             18891..19523
                     /locus_tag="JNZ89_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY8935533.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQVRIAGRDVSTSGLTAQLHETLPDGAVIHIVPRVAGAKSGGVFQIVLGAAAIAGS
                     FFTAGATLAAWGAAIGAGGMTGILFSLGASMVLGGVAQMLAPKARTPRTQTTDNGKQN
                     TCFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            19584..22982
                     /locus_tag="JNZ89_001621"
     CDS             19584..22982
                     /locus_tag="JNZ89_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY8935534.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVEGPVDGLKS
                     VLLNSTPVLDSEGNTNISGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRFTFGVQALVETTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVDNLPPRPFSIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGSQKVSRNYHLRGRVLQVPSNYNPQTRQYSGIWDGTFKPAYSNNMAWCL
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAWLTTQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
                     KDRHNAVEVNWIDPDNGWETATELVEDTQAILRYGRNVTKMDAFGCTSRGQAHRAGLW
                     LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISIGGRVLAVNSQTRTLTLD
                     REITLPSSGTTLISLVDGSGNPVSVEVQSVTDGVKVKVSRVPDGVAGYSVWGLKLPTL
                     RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDQSGTVNGVTPPAVQHL
                     TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTAETTYRFTQ
                     LALGRYTLTVRAVNAWGQQGDPASVSFRIAAPVAPSRIELTPGYFQITATPHLAVYDP
                     TVQFEFWFSETRITDIRQVETTARYLGAGLYWIAASINIKPGHDYYFYIRSVNTVGKS
                     AFVEAVGRASDDAEGYLDFFKGKITESHLGKELLEKVDLTEDNASRLDEFSKEWKDAN
                     DKWNAMWGVKIEQTKDGKHYVAGIGLSMEDTEEGKLSQFLVAANRIAFIDPANGNETP
                     MFVAQGNQIFMNDVFLKRLTAPTITSGGNPPAFSLTPDGKLTAKNADISGNVNANSGT
                     LNNVTINENCQIKGKLSANQIEGDIVKTVSKSFPRTNSYASGTITVRISDDQKFDRQV
                     MIPPVLFRGGKHENFNSNNQQSYWYSTCRLRVTRNGQEIFNQSTTDAQGVFSSVIDMP
                     AGQGTLTLTFTVSSSGANNWTPTTSISDLLVVVMKKSTAGISIS"
     gene            23049..23648
                     /locus_tag="JNZ89_001622"
     CDS             23049..23648
                     /locus_tag="JNZ89_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HAY8935535.1"
                     /translation="MRKLYAAILSAAICLAVSGAPAWASEHQSTLSAGYLHARTNVPG
                     SDDLNGINVKYRYEFTDTLGMVTSFSYAGDKNRQITRYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKKHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAIDVAYEGSGSGDWRTDGFIVGVGYKF"
     gene            23713..26736
                     /locus_tag="JNZ89_001623"
     CDS             23713..26736
                     /locus_tag="JNZ89_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8935536.1"
                     /translation="MAVKISGVLKDGTGKPVQNCTIQLKAKRNSTTVVVNTLASENPD
                     EAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDSRPGTLNDFLGAMTEDDARPEA
                     LRRFELMVEEVARNASVVAQNTAAAKKSASDASTSAREAATHATDAAGSARAASTSAG
                     QAASSAQSATSSAGTASTKATEASKSAAAAESSKSAAATSASAAKTSETNAAASQQSA
                     ATSASTATTKASEAATSARDAAASKEAAKSSETNASSSASSAASSATAAGNSAKAAKT
                     SETNARSSETAAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSA
                     STATTKAGEATEQASAAARSASAAKTSETNAKASETSAESSKTAAASSASSASSSASS
                     ASASKDEATRQASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAKRAE
                     DIASAVALEDASTTKKGIVQLSSATNSTSESLAATPKAVKAAYDLANGKYTAQDATTA
                     QKGIIQLSSATNSTSETLAATPKAVKAANDNAEKRLQKDQNGADIPGKDTFTKNIGAC
                     RAFGGSVSTTTGNWTTAQFIEWLDSQGAFNHPYWMCKGSWSYGNNKIITDTGCGNIHL
                     AGAVIEVMGIKSAMTIRITTPTTSTGGGTTNAQFTYINHGTDYSPGWRRDYNSRNKPT
                     ASEIGALPSGGTAVSSVNLSSKGRVTALTDNTQGATGLELYEVYNNGYPTAYGNIIHL
                     KGMTAVGEGELLIGWSGTSGAHAPAFIRSRRDTTDANWSPWAQLYTSAHPPAEFYPVG
                     APIPWPSDTVPSGYALMQGQTFDKSAYPKLAAAYPSGVIPDMRGWTIKGKPASDRAVL
                     SQEQDGIKSHTHSASVSSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGTAASAGAHTH
                     SMTFVSGGSSGAPGSGSPDYSKYSVNTSSAGAHTHSVSGTAASAGAHAHTVGIGAHTH
                     SVAIGSHGHTITVNAAGNAENTVKNIAFNYIVRLA"
     gene            26898..27320
                     /locus_tag="JNZ89_001624"
     CDS             26898..27320
                     /locus_tag="JNZ89_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8935537.1"
                     /translation="MAVFNSDEASWHLVEDHRGKTVYDVASGDALFISELGPLPENVT
                     WLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIA
                     TEEETSLLEAWKKYRVLLNRVDTSTAPDIEWPTNPVRE"
     gene            complement(27375..>27574)
                     /locus_tag="JNZ89_001625"
     CDS             complement(27375..>27574)
                     /locus_tag="JNZ89_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HAY8935538.1"
                     /translation="ATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEH
                     FENVKTKVQGTVVMFSASGKK"
BASE COUNT         6685 a         6800 c         8232 g         5857 t
ORIGIN      
        1 tttccccgtc tcagtgggcg gcaataggcg tgctggggag tctgctgttt gggctgctga
       61 catatctgac taacctgtat ttcaaaatca gagaggaccg tcgtaaggct gcacggggag
      121 agtaattcaa tgactcaaaa ctataaactg attgtgaaag ggatccgcaa ttttgagaat
      181 aaagttacgg taactttagc gttacgggac aaaaaacgct ttgacggtga aatttttgac
      241 ctggacatct cgctggaccg tgttgaaggt gccgcgctgg agttttatga ggcagcagcc
      301 agaaggagca tcagacaggt cttcctggat gttgctgccg ggttatgtga aggggatgag
      361 cagtcgccgg aaaagcgccc cgtaatttta gaggcgcaga atgtatggat aacctacaaa
      421 ggaaagctac cgggaagaat tactggttct ctgaagactc ctccggaatc acaaccttaa
      481 gtcactgacc ggaacagata aacctgtccg tgggcagaaa ccgataaatc ctgataaata
      541 tccatgaacg caaaaatcag atacggcctg tcggctgccg ttctggcgct gattgccgct
      601 ggtgcgcctg cgcctgacat tctcgaccag tttctggatg aaaaggaagg taaccacacc
      661 acggcatacc gtgatggcgc gggtatctgg accatctgcc gcggtgccat cctggtggat
      721 ggcaaacctg tcgttccggg catgaagttg tcgaaggaaa aatgcgaccg ggttaacgcc
      781 attgagcgtg ataaggcgct ggcatgggtg gagaaaaaca tcagagtgcc attgagtgaa
      841 ccccagaaag cggggatcgc gtcattctgt ccgtacaaca ttggccccgg taagtgtttt
      901 ccgtcgacgt tttataaacg aattaatgca ggtgatcgca ggggagcgtg tgaggcgatt
      961 cgctggtgga ttaaggacgg tggcagagac tgccgtattc gctcaaacaa ctgttacggt
     1021 caggtatccc gtcgcgacca ggagagtgcg ctggcgtgct ggggaattga cagataagca
     1081 gaatattttg ctgaaaaatg cggtttgctc acacggacgg ataacacgaa atcctgcgaa
     1141 ctgacaaaaa ctaagagaat aaaagtaaaa accccgtttg ttggctgcaa gcggggtttt
     1201 gtgtttcctg actccggaaa agtcaaagga gaaagtgtgt ttgattttag caaactgatt
     1261 cgggagattc gagtgatggc tgaaaaatta tccacctgga agttcattct tatctggctg
     1321 gtgtttgtga ttatggcctc cggttatttc atcggtcaga tacgctggtg gtgaaatgaa
     1381 ccgcgtactg tgcgtggtca tcattgccct gctggtggcc tgtggtgcgc ttagtctggg
     1441 gctgaatcat taccgtgata acgccataac ctacaaagag cagcgcgata aagccacatc
     1501 cacaatcgct gatatgcaga agcgtcaacg tgacgtagca gaactcgatg ccagatatac
     1561 aaaggagctt gctgatgcta acgcgactat cgaaagcctc cgtgctgatg tttctgctgg
     1621 gcgtaagcgc ctgcaagtcg ccgctacctg tgcaaagtca acgaccggag ccagcggcat
     1681 gggcaatgga gaaagcccaa gacttacagc agatgctgaa ctcaattatt accgtctccg
     1741 aagtggaatc gacaagataa ccgcgcaggt caactacctg caggagtaca tcaggacgca
     1801 gtgcttaaaa taattttaat ttcactgaaa tttaatacgt gactttcagg aaaatgcctc
     1861 gcagatgcgg ggcatttttg tacaggtatt tcaccgcgca ccgcagtgca ctcaaccacg
     1921 tcgaaccaaa ccctttggaa tgagcctttg agtagtcagt tagtgctggt gagccttgac
     1981 gggctgatct cctatgcagc aaaggttcat ctcaaagtaa ggcgaacgct atgacaaacc
     2041 aagattctat agacctatct gatcttcgtg gaatggtcag ttttccagac aaaaggtaat
     2101 caccatagtc gtatggctat gaatcttgtt gctgcagata agcattttgt gattgaagtg
     2161 gtcaaatctc tcaaatgcag taaaatgcag tgcgctataa ttcaataacg gagggagtaa
     2221 ggagaagtca tgaaagatca agatgttagg ttcgcggtgc atcataagct tttgaaagaa
     2281 tcgcatttag atccagacag ccttgtggtc gatgaatttt ccatatccct tggcgccagt
     2341 agagcagaca ttgctgtaat aaatggtgtt atacacgggt acgagctcaa aagtgaatat
     2401 gactctttgg agcgtttgcc tcttcaaatc aagcattatt cttctgtaat ggacaaggtt
     2461 actcttgtcg tagctgagaa acatcttgag ggagcattaa agttaatccc aggttggtgg
     2521 ggcgttaaaa cggtttctgt tgggccaaaa ggcgccattc ttataaagca catgcgtgga
     2581 gaaaagctta atcgaaacca tgacacattg atgctcgctc aattgctttg gaaagatgaa
     2641 tgtatcgacg tacttgaacg atggggctat tccaaaggaa tcaaaagcaa gccccgattt
     2701 gagttatgga atattattgc ggaaaatatt ccaatagcga atctcaggct tgaagtcaga
     2761 acagccttaa agaaacgcgt aggctggaaa gttaaggctt ggcaggctga gtctgcgcca
     2821 accaataaag ctgtctcacg actaacgtaa tatggtgcgt atgtgcaact ttacgccatt
     2881 ctttagagcc gccagatttg ttagcgccta atgatctttg gtaaatgtaa tcatcccccc
     2941 aactaaattt ggaaccaaag acttgatact ctggcgaact aacaagggta gtacataagt
     3001 ttttagtttg gccccatcca tttcctttaa ctgcggtacc ttttacaaag atccatgagg
     3061 tatcgttcga atatctcact gagacatact gagacatgaa gcgtgggtct acgctcgtaa
     3121 tggtagagct agcggtggga taatcactaa aacttggcgt tcttccattg ctaaaattct
     3181 gtactacgta catccaaaga tcgtattcat ggcgcggaat atgatgaact tgatgttgcg
     3241 gtatccctgc ctgtgatgct gggtatgcgg ttgaagataa aatcaagttt ctccacggag
     3301 cttggcctga taatgtgttg accatgctta atgcttgttg ttttaaacta tcagttgcgt
     3361 tttgaatatc tccaaaatca atgattacat caattaaact aggatgaata tttaagtggt
     3421 taaccagact tgtgaattgg tgccatgtct ggggggtgat agatatagcg agcccattga
     3481 ttaagttgcg ttgaacagca tgtatatagt ttgttgaata tgcgggagaa acaacaggga
     3541 taatttcctt accatttact ctagcatctt ggatacacat atctagagga tgatggcggc
     3601 tcgaaccatg tttatctaaa tatttaacat ccagcaaaac aggacgattg gctttccagg
     3661 atgccgcaag gttaataccg aagtcagata agtaagaact caaactcttc ttgtagcatt
     3721 cgttttcata atcccagtct atgtctggaa tggtaatgat cggagtaaaa ccagagagcg
     3781 tagtttgatc taaaagcatc agagattcat attcagcagg cttccatttc agctgtggat
     3841 aatattgatg ttgactcatt aaaactcctt aaaatcttta cttatcctaa gtatagtgtt
     3901 atggcgtaac gccaattgtt tttatacact tgaaaacatt gggaaaagtt gagctatatc
     3961 taaatttaca aaattggatg ttatagaaat cgaggtttca actaggcatg gaactgcaaa
     4021 atttttaatg cctgcacgcg aaagtcgttg gcgggtcctt tccggtgatc cagaccgtta
     4081 cggggcggcg acctcgcggg ttttcgctat ttatgaaaat tttccggttt aaggcgtttc
     4141 cgttcttctt cgtcgtaact taatgttttt atttaaaata ccccctgaaa agaaaggaaa
     4201 cgacaggtgc tgaaaacgaa cttttgggcc tttgtcgttt cctttctctg tttttggccg
     4261 tggaatgaac aatggaagtc aacaaaaagc agctggctga cattttcggt gcgagtatcc
     4321 gtaccattca gaactggcag gaacagggaa tgcccgttct gcgaggcggt ggcaagggta
     4381 atgaggtgct ttatgactct gccgccgtta taaaatggta tgccgaaagg gatgctgaaa
     4441 ttgagaacga aaagctgcgc cgggaggttg aagaactgcg ccaggccagc gaggcagatc
     4501 tccagccagg gactattgag tacgaacgcc atcgacttac gcgtgcgcag gccgacgcac
     4561 aggaactgaa gaatgccaga gactcagctg aagtggtgga aaccgcattc tgtactttcg
     4621 tgctgtcgcg gatcgcaggt gaaattgcca gtattctcga cgggatcccc ctgtcggtgc
     4681 agcggcgttt tccggaactg gaaaaccgac atgttgattt cctgaaacgg gatatcatca
     4741 aagccatgaa caaagcagcc gcgctggatg aactgatacc ggggttgctg agtgaatata
     4801 tcgaacagtc aggttaacag gctgcggcat tttgtccgcg ccgggcttcg ctcactgttc
     4861 aggccggagc cacagaccgc cgttgaatgg gcggatgcta attactatct cccgaaagaa
     4921 tccgcatacc aggaagggcg ctgggaaaca ctgccctttc agcgggccat catgaatgcg
     4981 atgggcagcg actacatccg tgaggtgaat gtggtgaagt ctgcccgtgt cggttattcc
     5041 aaaatgctgc tgggtgttta tgcctacttt atagagcata agcagcgcaa cacccttatc
     5101 tggttgccga cggatggtga tgccgagaac tttatgaaaa cccacgttga gccgactatt
     5161 cgtgatattc cgtcgctgct ggcgctggcc ccgtggtatg gcaaaaagca ccgggataac
     5221 acgctcacca tgaagcgttt cactaatggg cgtggcttct ggtgcctggg cggtaaagcg
     5281 gcaaaaaact accgtgaaaa gtcggtggat gtggcgggtt atgatgaact tgctgccttt
     5341 gatgaggata ttgaacagga aggctctccg acgttccttg gcgacaaacg tattgaaggc
     5401 tcggtctggc caaagtccat ccgtggctcc acgcccaaag tgagaggcac ctgccagatt
     5461 gagcgtgcag ccagtgaatc cccgcatttt atgcgttttc atgttgcctg cccgcactgc
     5521 ggggaggagc agtatcttaa atttggcgac aaagagacgc cgtttggcct caaatggacg
     5581 ccggatgacc cctccagcgt gttttatctc tgcgagcata atgcctgcgt catccgccag
     5641 caggagctgg actttactga tgcccgttat atctgcgaaa agaccgggat ctggacccgt
     5701 gatggcattc tctggttttc gtcatccggt gaagagattg agccacctga cagtgtgacc
     5761 tttcacatct ggacagcgta cagcccgttc accacctggg tgcagattgt caaagactgg
     5821 atgaaaacga aaggggatac gggaaaacgt aaaaccttcg taaacaccac gctcggtgag
     5881 acgtgggagg cgaaaattgg cgaacgtccg gatgctgaag tgatggcaga gcggaaagag
     5941 cattattcag cgcccgttcc tgaccgtgtg gcttacctga ccgccggtat cgactcccag
     6001 ctggaccgct acgaaatgcg cgtatgggga tgggggccgg gtgaggaaag ctggctgatt
     6061 gaccggcaga ttattatggg ccgccacgac gatgaacaga cgctgctgcg tgtggatgag
     6121 gccatcaata aaacctatac ccgccggaat ggtgcagaaa tgtcgatatc ccgtatctgc
     6181 tgggatactg gcgggattga cccgaccatt gtgtatgaac gctcgaaaaa acatgggctg
     6241 ttccgggtga tccccattaa aggggcatcc gtctacggaa agccggtggc cagcatgcca
     6301 cgtaagcgaa acaaaaacgg ggtttacctt accgaaatcg gtacggatac cgcgaaagag
     6361 cagatttata accgcttcac actgacgccg gaaggggatg aaccgcttcc cggtgccgtt
     6421 cacttcccga ataacccgga tatttttgat ctgaccgaag cgcagcagct gactgctgaa
     6481 gagcaggtcg aaaaatgggt ggatggcagg aaaaaaatac tgtgggacag caaaaagcga
     6541 cgcaatgagg cgctcgactg cttcgtttat gcgctggcgg cgctgcgcat cagtatttcc
     6601 cgctggcagc tggatctcag tgcactgctg gcgagcctgc aggaagagga tggtgcagca
     6661 accaacaaga aaacactggc agattacgcc cgtgccttat ccggagagga tgaatgacgc
     6721 gacaggaaga acttgccgct gcccgtgcgg cactgcatga cctgatgaca ggaaaacggg
     6781 tggcaacggt acagaaagac ggacggagag tggagtttac ggccacttcc gtgtctgacc
     6841 tgaaaaaata cattgcggag ctggaagtgc agaccggcat gacacagcga cgcaggggac
     6901 ctgcaggatt ttatgtatga aaacgtccac cattcccacc cttctggggc cggacggcat
     6961 gacatcgctg cgtgaatatg ccggttatca cggcggtggc agcggatttg gagggcagtt
     7021 gcgggcgtgg aacccaccga gtgaaagtgt ggatgcagcc ctgctgccca actttacccg
     7081 tggcaatgcc cgcgcagacg atctggtacg caataacggc tatgccgcca acgccatcca
     7141 gttgcatcag gatcatatcg tcgggtcttt tttccggctc agtcatcgcc caagctggcg
     7201 ctatctgggc atcggggagg aagaagcccg tgccttttcc cgcgaggttg aagcggcatg
     7261 gaaagagttt gccgaggatg actgctgctg cattgacgtt gagcgaaaac gcacgtttac
     7321 catgatgatt cgggaaggtg tggccatgca cgcctttaac ggtgaactgt tcgttcaggc
     7381 cacctgggat accagttcgt cgcggctttt ccggacacag ttccggatgg tcagcccgaa
     7441 gcgcatcagc aacccgaaca ataccggcga cagccggaac tgccgtgccg gtgtgcagat
     7501 taatgacagc ggtgcggcgc tgggatatta cgtcagcgag gacgggtatc ctggctggat
     7561 gccgcagaaa tggacatgga taccccgtga gttacccggc gggcgcgcct cgttcattca
     7621 cgtttttgaa cccgtggagg acgggcagac tcgcggtgca aatgtgtttt acagcgtgat
     7681 ggagcagatg aagatgctcg acacgctgca gaacacgcag ctgcagagcg ccattgtgaa
     7741 ggcgatgtat gccgccacca ttgagagtga gctggatacg cagtcagcga tggattttat
     7801 tctgggcgcg aacagtcagg agcagcggga aaggctgacc ggctggattg gtgaaattgc
     7861 cgcgtattac gccgcagcgc cggtccggct gggaggcgca aaagtaccgc acctgatgcc
     7921 gggtgactca ctgaacctgc agacggctca ggatacggat aacggctact ccgtgtttga
     7981 gcagtcactg ctgcggtata tcgctgccgg gctgggtgtc tcgtatgagc agctttcccg
     8041 gaattacgcc cagatgagtt actccacggc acgggccagt gcgaacgagt cgtgggcgta
     8101 ctttatgggg cggcgaaaat tcgtcgcatc ccgtcaggcg agccagatgt ttctgtgctg
     8161 gctggaagag gccatcgttc gccgcgtggt gacgttacct tcaaaagcgc gcttcagttt
     8221 tcaggaagcc cgcagtgcct gggggaactg cgactggata ggctccggtc gtatggccat
     8281 cgatggtctg aaagaagttc aggaagcggt gatgctgata gaagccggac tgagcaccta
     8341 cgagaaagag tgcgcgaaac gcggtgacga ctatcaggaa atttttgccc agcaggtccg
     8401 tgaaacgatg gagcgccgtg cagccggtct taaaccgccc gcctgggcgg ctgcagcatt
     8461 tgaatccggg ctgcgacaat caacagagga ggagaagagt gacagcagag ctgcgtaatc
     8521 tcccgcatat tgccagcatg gcctttaatg agccgctgat gcttgaaccc gcctatgcgc
     8581 gggttttctt ttgtgcgctt gcaggccagc ttgggatcag ccgcctgacg gatgcggtgt
     8641 ccggcgacag cctgactgcc caggaggcac tcgcgacgct ggcattatcc ggtgatgatg
     8701 acggaccacg acaggcccgc agttatcagg tcatgaacgg catcgccgtg ctgccggtgt
     8761 ccggcacgct ggtcagccgg acgcgggcgc tgcagccgta ctcggggatg accggttaca
     8821 acggcattat cgcccgtctg caacaggctg ccagcgatcc gatggtggac ggcattctgc
     8881 tcgatatgga cacgcccggc gggatggtgg cgggggcatt tgactgcgct gacatcatcg
     8941 cccgtgtgcg tgacataaaa ccggtatggg cgcttgccaa cgacatgaac tgcagtgcag
     9001 gtcagttgct tgccagtgcc gcctcccggc gtctggtcac gcagaccgcc cggacaggct
     9061 ccatcggcgt catgatggct cacagtaatt acggtgctgc gctggagaaa cagggtgtgg
     9121 aaatcacgct gatttacagc ggcagccata aggtggatgg caacccctac agccatcttc
     9181 cggatgacgt ccgggagaca ctgcagtccc ggatggacgc aacccgccag atgtttgcgc
     9241 agaaggtgtc ggcatatacc ggcctgtccg tgcaggctgt gctggatacc gaggctgcag
     9301 tgtacagcgg tcaggaggcc attgatgccg gactggctga tgaacttgtt aacagcaccg
     9361 atgcgatcac cgtcatgcgt gatgcactgg atgcacgtaa atcccgtctc tcaggagggc
     9421 gaatgaccaa agagactcaa tcaacaactg tttcagccac tgcttcgcag gctgacgtta
     9481 ctgacgtggt gccagcgacg gagggcgaga acgccagcgc ggcgcagccg gacgtgaacg
     9541 cgcagatcac cgcagcggtt gcggcagaaa acagccgcat tatggggatc ctcaactgtg
     9601 aggaggctca cggacgcgaa gaacaggcac gcgtgctggc agaaaccccc ggtatgaccg
     9661 tgaaaacggc ccgccgcatt ctggccgcag caccacagag tgcacaggcg cgcagtgaca
     9721 ctgcgctgga tcgtctgatg cagggggcac cggcaccgct ggctgcaggt aacccggcat
     9781 ctgatgccgt taacgatttg ctgaacacac cagtgtaagg gatgtttatg acgagcaaag
     9841 aaacctttac ccattaccag ccgcagggca acagtgaccc ggctcatacc gcaaccgcgc
     9901 ccggcggatt gagtgcgaaa gcgcctgcaa tgaccccgct gatgctggac acctccagcc
     9961 gtaagctggt tgcgtgggat ggcaccaccg acagtgctgc cgttggcatt cttgcggttg
    10021 ctgctgacca gaccagcacc acgctgacgt tctacaagtc cggcacgttc cgttatgagg
    10081 atgtgctctg gccggaggct gccagcgacg agacgaaaaa acggaccgcg tttgccggaa
    10141 cggcaatcag catcgtttaa ctttaccctt catcactaaa ggccgcctgt gcggcttttt
    10201 ttacgggatt tttttatgtc gatgtacaca accgcccaac tgctggcggc aaatgagcag
    10261 aaatttaagt ttgatccgct gtttctgcgt ctctttttcc gtgagagcta tcccttcacc
    10321 acggagaaag tctatctctc acaaattccg ggactggtaa acatggcgct gtacgtttcg
    10381 ccgattgttt ccggtgaggt tatccgttcc cgtggcggct ccacctctga atttacgccg
    10441 ggatatgtca agccgaagca tgaagtgaat ccgcagatga ccctgcgtcg cctgccggat
    10501 gaagatccgc agaatctggc ggacccggct taccgccgcc gtcgcatcat catgcagaac
    10561 atgcgtgacg aagagctggc cattgctcag gtcgaagaga tgcaggccgt ttctgccgtg
    10621 ctcaagggca aatacaccat gaccggtgaa gccttcgatc cggttgaggt ggatatgggc
    10681 cgcagtgcgg cgaacaacat cacgcagtcc ggcagcacgg agtggagcaa gcgtgacaag
    10741 tccacgtatg acccgaccga cgatatcgaa gcctacgcgc tgaacgccag cggcgtggtg
    10801 aatatcatcg tgtttgatcc gaaaggctgg gcgctgttcc gttccttcaa agccgtcagg
    10861 gagaagctgg atacccgtcg cggctctcat tccgagctgg agacagcggt gaaagacctg
    10921 ggtaaagcgg tgtcctataa ggggatgtat ggcgatgtgg ccatcgtcgt gtattccgga
    10981 cagtacgtgg aaaacggcgt caaaaagaac ttcctgccgg acaacacgat ggtactgggg
    11041 aacactcagg cacgcggtct gcgcacctat ggctgcattc aggatgcgga cgcacagcgc
    11101 gaaggcatta acgcctctgc ccgttacccg aaaaactggg tgaccaccgg cgatccggcg
    11161 cgtgagttca ccatgattca gtcagcaccg ctgatgctgc tggctgaccc tgatgagttc
    11221 gtgtccgtac aactggcgta atcgtggccc ttcggggcca ttttctctct gtggaggagt
    11281 ccatgacgaa agatgaactg attgtccgtc tccggtcgct gggtgagcaa ctgaaccgtg
    11341 atgtcagcct gacggggacg aaagaagaac tggcgctccg tgtggcagag ctggaagagg
    11401 agcttgatga cacggatgac gctgccggtc aggatacccc tctcagaccg gaaaatgcgc
    11461 tgaccggaca tgaaaatgag gtggtatcag cacagacgga taccgtgact gatgcggctg
    11521 ctctggtcac ggttgtggca ctggtgacgc tgcataccga tgcacttcac gccacgcggg
    11581 atgaacctgt ggcatttgtg ctgccggaaa cggcgttccg tgtctctgcc ggtgtggcag
    11641 ctgaaatgac agagcgcggc ctggccagaa tgcaataacg ggaggcgctg tggctgattt
    11701 cgataacctg ttcgatgctg ccattgcccg cgccgatgaa acgatacgcg ggtacatggg
    11761 aacgtcagcc accatgacat ccggtgagca gtccggcgca gtaatacgtg gtgtttttga
    11821 tgaccctgaa aatatcagct atgccggaca gggcgtacgc gttgaaggct ccagcccgtc
    11881 cctgtttgtc cggactgatg aggtgcggca gctgcggcgc ggcgacacgc tgaccatcgg
    11941 tgaggaaaac ttctggatag accggatttc gccggatgat ggcggaagct gtcatctctg
    12001 gcttgggcgg ggcgtaccgc ctgccgttaa ccgtcgccgc tgaaaggggg atgtatggcc
    12061 ataaaaggtc ttgagcaggc cgttgaaaac ctcagccgta tcagtaaaac ggcggtgccc
    12121 ggtgccgccg caatggccat taaccgcgtt gcttcatccg cgatatcgca gtcggcgtca
    12181 caggttgctc gtgagacaaa ggtacgccgg aaactggtaa aggaaagggc caggctgaaa
    12241 agggccacgg tcaaaaatcc gcaggccaga atcaaagtta accgggggga tttgcccgta
    12301 atcaagctgg gtaatgcgcg ggttgtcctt tcgcgccgca ggcgtcgtaa aaaggggcag
    12361 cgttcatccc tgaaaggtgg cggcagcgtg cttgtggtgg gaaaccgtcg tattcccggc
    12421 gcgtttattc agcaactgaa aaatggccgc tggcatgtca tgcagcgtgt ggccgggaaa
    12481 aaccgttacc ccattgatgt ggtgaaaatc ccgatggcgg tgccgctgac cacggcgttt
    12541 aaacagaata ttgaacggat acggcgtgaa cgtcttccga aagagctggg ctatgcgctg
    12601 cagcatcaac tgagaatggt aataaagcga tgaaacatac tgaactccgt gcagccgtac
    12661 tggatgcact ggagaagcat gacagcgggg cgacgctttt tgatggtcgc cccgctgttt
    12721 ttgatgagga agattttccg gcaattgccg tttatctcac cggcgctgaa tacacgggcg
    12781 aagagctgga cagcgatacc tggcaggcgg agctgcatat tgaagttttc ctgcctgctc
    12841 aggtgccgga ttcagagctg gatgcgtgga tggagtcccg gatttatccg gtgatgagcg
    12901 atatcccggc actgtcagat ttgatcacca gtatggtggc cagtggctat gactaccggc
    12961 gcgacgatga tgcgggcctg tggagttcag ccgatctgac ttatgtcatt acctatgaaa
    13021 tgtgaggacg ctatgcctgt accaaatcct acaatgccgg tgaaaggtgc cgggaccacc
    13081 ctgtgggttt ataaggggag cggtgaccct tatgcgaacc cgctttcaga cgttgactgg
    13141 tcgcgtctgg caaaagttaa agacctgacg cccggcgaac tgaccgctga gtcctatgac
    13201 gacagctatc tcgatgataa agatgcagac tggactgcga ccgggcaggg gcagaaatct
    13261 gccggagata ccagcttcac gctggcgtgg atgcccggag agcaggggca gcaggcgctg
    13321 ctggcgtggt ttaatgaagg tgatacccgt gcctataaaa tccgcttccc gaacggcacg
    13381 gtcgatgtgt tccgtggctg ggtcagcagt atcggtaagg cggtgacggc gaaggaagtg
    13441 attacccgca cggtgaaggt caccaatgtg ggacgtccgt cgatggcaga agatcgcagc
    13501 acggtaacag cggcaaccgg catgaccgtg acgcctgcca gcacttcggt ggtgaaaggg
    13561 cagagcacca cgctgaccgt ggcattccag ccggaaggcg caaccgacaa gagcttccgt
    13621 gcggtgtctg cggataaaac aaaagccacc gtgtcggtca gtggtatgac catcaccgtg
    13681 aaaggtgttg ctgcaggcaa ggtcaacatt ccggttgtat ccggtaatgg tgaacttgct
    13741 gtggttgcag aaatcaccgt caccgacagt taatccggag agtcagcgat gttcctgaaa
    13801 accgaatcat ttgaatataa cggtgtgagc gtcacgcttt ctgaactgtc agccctgcag
    13861 cgaattgagc atctcgccct gctgaaacga caggcagaac aggcgggatc cagtctcaat
    13921 cgacaggtga gcgtggaaga tctcgtcaga accggtgctt ttctggtggc gatgtccctg
    13981 tggcatagcc atccgcagaa gacaaagatg ccgtccatga atgaagccgt taaacaaatt
    14041 gagcaggaag tgcttaccac ctggcccaca gaggcaattg ctcaggctga aaatgtggta
    14101 atgcgtctgt ccggtatgtc tgagtttgtt gtgaatgatg cacctgaaca ggcagatgac
    14161 gccgggccag cagagcctgt ttctgcggga aagtgttcga cggtgagctg agttttgccc
    14221 tgaaactggc gcgtgagatg gggcgacccg actggcgcgc catgcttgcc gggatgtcat
    14281 ccacggagta tgccgactgg caccgctttt acagtatcca ttattttcat gatgttctgc
    14341 tggatatgca cttttccggg ctgacgtaca ccgtactcag cctgtttttc agcgatccgg
    14401 atatgcatcc gctggatttc agtctgctga accggcgcga ggctgacgaa gagcctgaag
    14461 atgatgtgct gatgcagaaa gcggcagggc ttgccggagg cgtccgcttt ggcccggacg
    14521 ggaatgaagt tatccccgct tccccggatg tggcggacat gacggaggat gacgtaatgc
    14581 tgatgacagt atcagaaggg atcgcaggag gagtccggta tggctgaacc ggtaggcgat
    14641 ctggtcgttg atttgagtct ggatgcggcc agatttgacg agcagatggc cagagtcagg
    14701 cgtcattttt ccggtacgga aagtgatgcg aaaaaaacag cggcagtcgt tgaacagtcg
    14761 atgaaccggc aggcgctggc tgcacagaaa gtgggaattt ccgtcgggca gtataaagcc
    14821 gccatgcgta tgctgcctgc gcagttcact gacgtggcca cgcagcttgc aggcgggcaa
    14881 agtccgtggc tgatcctgct gcaacagggg ggtcaggtga aggactcctt cggcgggatg
    14941 atccccatgt tccgggggct tgccggtgcg atcaccctgc cgatggtggg ggccacctcg
    15001 ctggcggtgg cgaccggagc gctggcgtat gcctggtatc agggcaactc aaccctgtcc
    15061 gatttcaaca aaacgctggt cctttccggc aatcaggcgg gactgacggc agatcgtatg
    15121 ctggtcctgt ccagagccgg gcaggcggca gggctgacgt ttaaccagac cagcgagtca
    15181 ctcagcgcac tggttaaggc gggggtaagc ggtgaggctc agattgcgtc catcagccag
    15241 agtgtggcgc gtttctcctc tgcatccggc gtggaggtgg acaaggtcgc tgaagccttc
    15301 gggaagctga ccacagaccc gacgtcgggg ctgacggcga tggcacgcca gttccataac
    15361 gtgacggcgg agcagattgc gtatgttgct cagttgcagc gttccggcga tgaagccggg
    15421 gcattgcagg cggcgaacga ggccgcaacg aaagggtttg atgaccagac ccgacgcctg
    15481 aaagagaaca tgggcacgct ggaaacctgg gcagacagga cagcacgggc attcaaatcc
    15541 atgtgggatg cggtgctgga tattggtcgt cctgataccg ctcaggagat gctgattaag
    15601 gcagaggctg cgtttaagaa agcagacgac atctggaatc tgcgcaagga tgattatttt
    15661 gttaacgatg aagcgcgggc gcgttactgg gatgatcgtg aaaaggcccg tcttgcgctt
    15721 gaagccgccc gaaagaaggc tgagcagcag actcaacagg acaaaaatgc gcagcagcag
    15781 agcgatactg aagcgtcaca gctgaaatat accgaagagg cgcagaaggc ttacgaacgg
    15841 ctgcagacgc cgctggagaa atataccgcc cgtcaggaag aactgaacaa ggcactgaaa
    15901 gacgggaaaa tcctgcaggc ggattacaac acgctgatgg cggcggcgaa aaaggattat
    15961 gaagcgacgc tgaaaaagcc gaaacagtcc ggcgtgaagg tgtctgcggg cgatcgtcag
    16021 gaagacagtg ctcatgctgc cctgctgacg cttcaggcag aactccggac gctggagaag
    16081 catgccggag caaatgagaa aatcagccag cagcgccggg atttgtggaa ggcggagagt
    16141 cagttcgcgg tactggagga ggcggcgcaa tgtcgccagc tgtctgcaca ggagaaatcc
    16201 ctgctggcgc ataaagatga gacgctggag tacaaacgcc agctggctgc acttggcgac
    16261 aaggttacgt atcaggagcg cctgaacgcg ctggcgcagc aggcggataa attcgcacag
    16321 cagcaacggg caaaacgggc cgccattgat gctaaaagcc gggggctgac tgaccggcag
    16381 gcagaacggg aagccacgga acagcgcctg aaggaacagt atggcgataa tccgctggcg
    16441 ctgaataacg tcatgtcaga gcagaaaaag acctgggcgg ctgaagacca gcttcgcggg
    16501 aactggatgg caggcctgaa gtccggctgg agtgagtggg aagagagcgc cacggacagt
    16561 atgtcgcagg taaaaagtgc agccacgcag acctttgatg gtattgcaca gaatatggcg
    16621 gcgatgctga ccggcagtga gcagaactgg cgcagcttca cccgttccgt gctgtccatg
    16681 atgacagaaa ttctgcttaa gcaggcaatg gtggggattg tcgggagtat cggcagcgcc
    16741 attggcgggg ctgttggtgg cggcgcatcc gcgtcaggcg gtacagccat tcaggccgct
    16801 gcggcgaaat tccattttgc aaccggagga tttacgggaa ccggcggcaa atatgagcca
    16861 gcggggattg ttcaccgtgg tgagtttgtc ttcacgaagg aggcaaccag ccggattggc
    16921 gtggggaatc tttaccggct gatgcgcggc tatgccaccg gcggttatgt cggtacaccg
    16981 ggcagcatgg cagacagccg gtcgcaggcg tccgggacgt ttgagcagaa taaccatgtg
    17041 gtgattaaca acgacggcac gaacgggcag ataggtccgg ctgctctgaa ggcggtgtat
    17101 gacatggccc gcaagggtgc ccgtgatgaa attcagacac agatgcgtga tggtggcctg
    17161 ttctccggag gtggacgatg aagaccttcc gctggaaagt gaaacccggt atggatgtgg
    17221 cttcggtccc ttctgtaaga aaggtgcgct ttggtgatgg ctattctcag cgagcgcctg
    17281 ccgggctgaa tgccaacctg aaaacgtaca gcgtgacgct ttctgtcccc cgtgaggagg
    17341 ccacggtact ggagtcgttt ctggaagagc acgggggctg gaaatccttt ctgtggacgc
    17401 cgccttatga gtggcggcag ataaaggtga cctgcgcaaa atggtcgtcg cgggtcagta
    17461 tgttgcgtgt tgagttcagc gcagagtttg aacaggtggt gaactgatgc aggatatccg
    17521 gcaggaaaca ctgaatgaat gcacccgtgc ggagcagtcg gccagcgtgg tgctctggga
    17581 aatcgacctg acagaggtcg gtggagaacg ttattttttc tgtaatgagc agaacgaaaa
    17641 aggtgagccg gtcacctggc aggggcgaca gtatcagccg tatcccattc aggggagcgg
    17701 ttttgaactg aatggcaaag gcaccagtac gcgccccacg ctgacggttt ctaacctgta
    17761 cggtatggtc accgggatgg cggaagatat gcagagtctg gtcggcggaa cggtggtccg
    17821 gcgtaaggtt tacgcccatt ttctggatgc ggtgaacttc gtcaacggaa acagttacgc
    17881 cgatccggag caggaggtga tcagccgctg gcgcattgag cagtgcagcg aactgagcgc
    17941 ggtgagtgcc tcctttgtac tgtccacgcc gacggaaacg gatggcgctg tttttccggg
    18001 acgtatcatg ctggccaaca cctgcacctg gacctatcgc ggtgacgagt gcggttatag
    18061 cggtccggct gtcgcggatg aatatgacca gccaacgtcc gatatcacga aggataaatg
    18121 cagcaaatgc ctgagcggtt gtaagttccg caataacgtc ggcaactttg gcggcttcct
    18181 ttccattaac aaactttcgc agtaaatccc atgacacaga cagaatcagc gattctggcg
    18241 cacgcccggc gatgtgcgcc agcggagtcg tgcggcttcg tggtaagcac gccggagggg
    18301 gaaagatatt ttccctgcgt gaatatctcc ggtgagccgg aggcgtattt ccgtatgtcg
    18361 ccggaagact ggctgcaggc agaaatgcag ggtgagattg tggcgctggt ccacagccac
    18421 cccggtggtc tgccctggct gagtgaggcc gaccggcggc tgcaggtgca gagtgatttg
    18481 ccgtggtggc tggtctgccg ggggacgatt cataagttcc gctgtgtgcc gcatctcacc
    18541 gggcggcgct ttgagcacgg tgtgacggac tgttacacac tgttccggga tgcttatcat
    18601 ctggcgggga ttgagatgcc ggacttttat cgtgaggatg actggtggcg taacggccag
    18661 aatctctatc tggataatct ggaggcgacg gggctgtatc aggtgccgtt gtcagcggca
    18721 cagccgggcg atgtgctgct gtgctgtttt ggttcatcag tgccgaatca cgccgcaatt
    18781 tactgcggcg acggcgagct gctgcaccat attcctgaac aactgagcaa acgagagagg
    18841 tacaccgaca aatggcagcg acgcacacac tccctctggc gtcaccgggc atggcgcgca
    18901 tctgccttta cggggattta caacgatttg gtcgccgcat cgaccttcgt gtgaaaacgg
    18961 gggctgaagc catccgggca ctggccacac agctcccggc gtttcgtcag aaactgagcg
    19021 acggctggta tcaggtacgg attgccgggc gggacgtcag cacgtccggg ttaacggcgc
    19081 agttacatga gactctgcct gatggcgctg tgattcatat tgttcccaga gtcgccgggg
    19141 ccaagtcagg tggcgtattc cagattgtcc tgggggctgc cgccattgcc ggatcattct
    19201 ttaccgccgg agccaccctt gcagcatggg gggcagccat tggggccggt ggtatgaccg
    19261 gcatcctgtt ttctctcggt gccagtatgg tgctcggtgg tgtggcgcag atgctggcac
    19321 cgaaagccag aactccccgt acacagacaa cggataacgg caaacagaac acctgtttct
    19381 cctcactgga taacatggtt gcccagggca atgttctgcc ggttctgtac ggtgaaatgc
    19441 gcgtggggtc acgcgtggtt tctcaggaga tcagcacggc agacgaaggg gacggtggtc
    19501 aggttgtggt gattggtcgc tgatgcaaaa tgttttatgt gaaaccgcct ccgggcggtt
    19561 ttatcgttta tggagcatga cgaatgggta aaggcagcag taaggggcat accccgcgcg
    19621 aagcgaagga caacctgaag tccacgcagc tgctgagtgt gatcgatgcc atcagcgaag
    19681 ggccggttga aggtccggtg gatggattaa aaagcgtgct gctgaacagt acgccggtgc
    19741 tggacagtga ggggaatacc aatatatccg gcgtcacggt ggtgttccgg gccggtgagc
    19801 aggagcagac accgccggag ggatttgaat cctccggttc cgagacggtg ctcggtacag
    19861 aagtgaaata tgacacgccg atcacccgca ccattacgtc tgcaaacatc gaccgtctgc
    19921 gctttacctt cggtgtacag gcactggtgg aaaccacctc aaagggggac aggaatccat
    19981 cggaagtccg cctgctggtt cagatacagc gtaacggtgg ctgggtgacg gaaaaagaca
    20041 tcaccattaa gggtaaaacc acttcacagt atctggcctc ggtggtggtg gataacctgc
    20101 cgccgcgccc gttcagtatc cggatgcgca ggatgacgcc ggacagcacc acagaccagc
    20161 tgcagaacaa aacgctctgg tcgtcataca ccgaaattat cgatgtgaaa cagtgctacc
    20221 cgaacacggc actggtcggc gtgcaggtgg actcggagca gttcggcagc cagaaggtga
    20281 gccgtaatta tcatctgcgc gggcgtgttc tgcaggtgcc gtcgaattat aacccgcaga
    20341 cgcggcaata cagcggtatc tgggacggaa cgtttaaacc ggcatacagc aacaacatgg
    20401 cctggtgtct gtgggatatg ctgacccatc cgcgctacgg catggggaaa cgtcttggtg
    20461 cggcggatgt ggataaatgg gcgctgtatg tcatcggcca gtactgcgac cagtcagtgc
    20521 cggacggctt tggcggcaca gagccgcgca tcacctgtaa tgcctggctg accacgcagc
    20581 gtaaggcgtg ggatgtgctc agtgatttct gctcggcgat gcgctgtatg ccggtatgga
    20641 acgggcagac gctgacgttc gtgcaggacc gaccatcaga taaggtgtgg acctataacc
    20701 gcagtaatgt ggtgatgccg gatgatggcg cgccgttccg ctacagcttc agcgccctga
    20761 aggaccgcca taatgccgtt gaggtgaact ggattgaccc ggataacggc tgggagacgg
    20821 cgacagagct tgtggaggac acgcaggcca ttctccgtta cggtcgtaac gtcacgaaga
    20881 tggatgcctt tggctgtacc agccgggggc aggcacaccg cgccgggctg tggctgatta
    20941 aaacggagct gctggagacg cagaccgtgg atttcagcgt cggcgcagaa gggcttcgcc
    21001 atgtgccggg tgatgttatt gaaatctgcg atgatgacta tgcggggatc agcatcggcg
    21061 ggcgcgtgct ggcggtgaac agccagaccc ggacgctgac gctcgaccgt gaaatcacgc
    21121 tgccatcctc cggtaccacg ctgataagcc tggttgacgg aagtggcaat ccggtcagcg
    21181 tggaggtcca gtccgtcacc gacggcgtga aggtaaaagt gagccgtgtt cctgacggcg
    21241 ttgccggata cagcgtatgg gggctgaagt tgccgacgtt gcgccagcgc ctgttccgct
    21301 gcgtgagtat ccgtgagaac gatgacggca cgtatgccat caccgccgtg cagcatgtac
    21361 cggaaaaaga ggccatcgtg gataacgggg cgcactttga cggcgaccag agcggcacgg
    21421 tgaatggtgt cacgccgcca gcagtgcagc atctgaccgc cgaagtcact gcagacagcg
    21481 gggaatatca ggtgctggcg cgatgggaca cgccgaaggt ggtgaagggc gtgagcttcc
    21541 tgcttcgcct gaccgtggca gcggatgacg gcagtgagcg gctggtcagc acggcccgga
    21601 cggcggaaac cacataccgc ttcacgcagc tggcgctggg acggtacacg ctgacagtcc
    21661 gggcggtaaa tgcgtgggga cagcagggcg atccggcgtc ggtatcgttc aggattgccg
    21721 caccggtagc accgtcgcgg attgagctga cgccgggcta ttttcagata actgccacgc
    21781 cgcatcttgc ggtttatgat ccgacggtac agtttgagtt ctggttctcg gaaacgcgga
    21841 ttaccgatat caggcaggtt gaaaccacag cccgctacct tggcgcgggg ctgtactgga
    21901 tagccgccag tatcaatatc aaaccgggcc atgattatta cttttatatc cgcagtgtga
    21961 acaccgttgg caaatcggca ttcgtggagg ccgtcggtcg ggcgagcgat gatgcggaag
    22021 gttacctgga ttttttcaaa ggcaagataa ccgaatccca tctcggtaaa gagctgctgg
    22081 aaaaagttga tctgacggag gataacgcca gcagactgga tgagttttcg aaagagtgga
    22141 aggacgctaa cgataaatgg aatgcgatgt ggggcgtcaa aattgagcag accaaagacg
    22201 gcaaacatta tgtcgcgggt attggcctca gcatggagga cacggaggaa ggcaagctga
    22261 gccagtttct ggttgccgct aaccgtatcg cgtttattga cccggcaaac gggaatgaaa
    22321 cgccgatgtt tgtggcgcag ggcaaccaga tattcatgaa tgacgtgttc ctgaaacgcc
    22381 tgacggctcc caccattacc agcggtggaa atccgccggc attttccctg acaccagacg
    22441 gaaagctgac cgctaaaaat gcggatatca gcggtaatgt gaatgcaaat tcagggacgc
    22501 tcaacaatgt cacgattaat gaaaactgtc agattaaggg gaaactgtca gccaatcaga
    22561 ttgaaggcga tattgtcaaa acggtcagca agtctttccc ccgcacgaac agttatgcca
    22621 gtggcaccat cacggtaaga atcagtgatg atcagaaatt tgaccggcag gtcatgatac
    22681 cgccagtgtt attccgcggt ggtaagcatg agaatttcaa cagtaataac caacagtcat
    22741 actggtattc aacctgccgg ttaagagtga cccgcaatgg tcaggagatt tttaatcagt
    22801 ccacgacgga tgctcagggc gtattttcct cagttataga tatgcctgcc ggacagggga
    22861 cgctgacact gacattcacc gtatcttcat caggagcgaa taactggaca ccaacaacca
    22921 gtatcagcga tctgctggtt gtggtgatga aaaaatccac agcaggtatc agtatcagct
    22981 gaattttata acccagaacg ggcgtcagaa atgacgcctt ttttattgca gaaaagcgag
    23041 aggtaattat gcgtaaactt tatgccgcca ttttgtccgc agccatttgt ctggccgtat
    23101 ccggtgcgcc tgcatgggcg tctgaacatc agtccacgct gagcgcgggg tatcttcatg
    23161 cccggacgaa cgttcccggc agtgatgatc tgaacgggat taacgtgaaa taccgttatg
    23221 agtttacgga cacactgggg atggtgacgt cgttcagcta tgcaggagac aagaatcgcc
    23281 agattacccg ttacagcgat acccgctggc atgaagattc cgttcgtaac cgctggttca
    23341 gcgtaatggc ggggccgtct gtgcgcgtga atgaatggtt cagcgcgtat gcgatggcgg
    23401 gtgtggctta cagccgtgtg tcgactttct ccggggatta tctccgcgta actgacaaca
    23461 aggggaaaaa gcacgatgtg ctgaccggaa gtgatgacgg tcgccacagc aacacgtctc
    23521 tggcgtgggg agctggcgtg cagtttaacc cgaccgaatc cgtggccatt gatgtcgctt
    23581 atgaaggctc cggcagtggt gactggcgca ctgacgggtt catcgtgggt gttggttata
    23641 aattctgatt agccaggtaa cacagtgtta tgacagcccg ccggttcagg cgggcttttt
    23701 tgtggggtga atatggcagt aaaaatttca ggtgtactga aagacggcac aggaaaaccg
    23761 gtacagaact gcacaatcca gctgaaagca aaacgtaaca gtaccacggt ggtggtgaac
    23821 acgctggcat ctgaaaatcc ggatgaagcc gggcgttaca gcatggacgt tgagtacggt
    23881 cagtacagcg ttattctgtt ggtggaagga ttcccgccgt cacatgccgg gaccatcacc
    23941 gtgtatgaag attcccgacc cggtacgctg aatgattttc tcggtgccat gacggaggat
    24001 gatgcccgtc cggaggcact gcgccgtttt gagctgatgg tggaagaggt ggcgcgtaac
    24061 gcgtccgtgg tggcacagaa cacggcagcc gcgaagaagt cagccagtga tgccagcaca
    24121 tcagcccgtg aggcggcaac ccatgcgact gatgctgcag gctcagcacg cgcagccagc
    24181 acgtcagccg gacaggccgc gtcgtcggct cagtcagcga cttccagcgc aggaacggca
    24241 tcaacaaagg ccactgaagc atcaaaaagt gctgccgctg cagagtcctc aaaaagcgcg
    24301 gcagctacca gtgccagtgc cgcgaaaacg tcagaaacga atgctgcagc gtcacaacaa
    24361 tcagcagcca cttctgcatc caccgcgact acgaaagcgt cagaagctgc cacctcagcc
    24421 cgggatgcgg cggcttcaaa agaggcggca aaatcatcag aaacgaacgc atcctcgagc
    24481 gccagtagcg cagcttcctc ggcaacagcg gcaggaaatt ccgcgaaggc ggcaaaaacg
    24541 tcagagacga acgccaggtc ttctgaaacg gcagcgggac agagcgcctc ggctgcggca
    24601 ggctcaaaaa cagcggctgc gtcgtctgcc agtgcagcgt caacaagtgc cgggcaggcc
    24661 tcagccagtg ccaccgccgc cggaaaatcg gcagaaagcg ccgcatcgtc tgcttcaaca
    24721 gccacaacga aggctggcga agccactgaa caggccagcg cagcagcgag gtctgcttcc
    24781 gcagcgaaga catccgaaac gaacgcgaaa gcgtcggaaa ccagcgcaga atcctcaaaa
    24841 acggctgccg catcgtcagc cagttcggcg tcgtcatcgg cctcatcggc gtctgcttca
    24901 aaagatgagg cgaccagaca ggcgtcagca gcgaagggta gcgccacgac ggcatccacg
    24961 aaggcgacag aggcagctgg cagtgcgacg gcggcagctc agagcaaaag tacggcggaa
    25021 tctgcagcaa cgcgcgccga gacagcggca aaacgggcag aggatattgc atccgccgtg
    25081 gcgcttgagg atgcgagcac gacgaaaaag gggatagtac agctcagcag tgcgaccaac
    25141 agcacttccg agtcactggc ggcaacgcca aaagccgtta aggccgcgta tgacctggct
    25201 aacgggaaat acaccgcaca ggatgcaacg acagcacaga aagggataat ccagctaagc
    25261 agcgcgacca acagcacgtc tgaaacgctg gcggcaacgc caaaggcagt aaaagcagcc
    25321 aatgacaatg ctgagaaacg tctgcagaaa gatcagaacg gtgcggatat ccctggcaaa
    25381 gacaccttta cgaaaaatat tggtgcctgc cgtgccttcg gtgggtcagt aagcacaaca
    25441 acaggaaact ggacgactgc acagtttatc gagtggctgg attctcaggg agcatttaac
    25501 catccatact ggatgtgcaa gggttcctgg tcttatggca ataataaaat cattactgat
    25561 actggctgcg gtaatattca tctcgccgga gctgtcattg aagtaatggg gataaagtca
    25621 gcgatgacga tccgcattac cacaccgacc acctccactg gtggtggaac aactaacgcc
    25681 cagtttacct atattaatca cggaacagat tattcacctg gctggcgaag ggactataac
    25741 tccagaaata agccaacggc atcagagatc ggggcgttac cgtcaggtgg aacagcagta
    25801 tcatcagtta atctgtcttc aaaaggtcgg gtaaccgcgc tgacagacaa tacgcagggg
    25861 gcaacaggtc ttgagttata cgaggtgtat aacaacggat atccaacagc gtatggaaat
    25921 atcattcacc tgaaagggat gacagccgtt ggcgaaggtg agttactcat cggctggagt
    25981 ggtacaagcg gtgctcatgc tccggcattt attcgttcac gacgggatac gaccgacgca
    26041 aactggtcgc cgtgggcgca gctttacacc tcggctcatc ctcctgcaga gttttatcca
    26101 gtcggtgcac caatcccgtg gccatcagat accgttccgt ctggttatgc cctgatgcag
    26161 gggcagactt ttgacaaatc tgcttacccg aaacttgcag ccgcttatcc gtcaggcgtg
    26221 atccctgata tgcgtggctg gacgattaag ggcaagcccg ccagtgatcg agccgtattg
    26281 tctcaggaac aggacggcat taaatcacac acccacagcg ccagcgtatc cagtacggat
    26341 ttggggacga aaaccacatc gtcgtttgat tacggcacta aatccacgaa taacactggt
    26401 gcgcataccc atagtgttag cggtacggct gcttcagccg gtgcacatac ccattcgatg
    26461 acatttgttt caggtggttc cagtggtgct ccgggaagtg gatcacctga ttattctaaa
    26521 tacagtgtta acacttcttc tgcaggcgct catacgcact ctgtatcggg tactgctgca
    26581 agcgcaggtg cacacgcaca tactgtcggt attggtgctc atacgcactc cgttgcgatt
    26641 ggttcacatg gacataccat caccgttaac gctgctggta acgcggaaaa caccgtcaaa
    26701 aacatcgcat ttaactatat tgtgaggctt gcataatggc attcagaatg agtgaacaac
    26761 cacggaccat aaaaatttat aatctgctgg ccggaactaa tgaatttatt ggtgaaggtg
    26821 atgcatatat tccgcctcat acaggtctgc cagcaaacag taccgatatt gcaccgccag
    26881 atattccggc aggcttcgtg gctgttttca acagtgatga ggcatcgtgg catctcgttg
    26941 aagaccatcg gggtaaaacg gtttatgacg tagcgtcagg ggacgcgtta tttatttctg
    27001 aactcggtcc gttaccggaa aatgttacct ggttatcgcc ggaaggggag tttcagaagt
    27061 ggaacggcac agcctgggtg aaagatgcag aagcagaaaa actgttccgg atccgggagg
    27121 cggaagaaac aaaaaacagc ctgatgcagg tagccagtga gcatattgcg ccacttcagg
    27181 atgctgtaga tctggaaatc gcaacggagg aagaaacctc attgctggaa gcctggaaaa
    27241 aatatcgggt gttgctgaac cgtgttgata catcaactgc acctgatatt gagtggccta
    27301 cgaaccctgt cagggagtaa tcattgggat tatgccgcag cacgtcttaa gcaagaacgt
    27361 gctgcggttg gatgctattt tttccctgaa gcggaaaaca ttactacagt accttgaacc
    27421 ttggttttaa cattctcgaa atgctctgag agtatatgtg ttaagccttc ttcggaatct
    27481 tttgtgtttg aaaagatgcc tttctgattg taaatgcgca tcagtttttg accgaagcta
    27541 ttgtgcacaa ctccatcgcc aagaattgtg gctc
//
LOCUS       DADMIB010000040        27527 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.040, whole genome shotgun sequence.
ACCESSION   DADMIB010000040 DADMIB010000000
VERSION     DADMIB010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27527
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.040"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(174..704)
                     /gene="ppa"
                     /locus_tag="JNZ89_001626"
     CDS             complement(174..704)
                     /gene="ppa"
                     /locus_tag="JNZ89_001626"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HAY8935539.1"
                     /translation="MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDR
                     FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGE
                     DAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAE
                     AAKAEIVASFERAKNK"
     gene            1014..1970
                     /gene="ytfQ"
                     /locus_tag="JNZ89_001627"
     CDS             1014..1970
                     /gene="ytfQ"
                     /locus_tag="JNZ89_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactofuranose ABC transporter
                     substrate-binding protein YtfQ"
                     /protein_id="HAY8935540.1"
                     /translation="MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNV
                     AKSEAEKRGITLKIADGQQKQENRIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKD
                     AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
                     ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYA
                     HNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPA
                     FDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY"
     gene            2110..2646
                     /locus_tag="JNZ89_001628"
     CDS             2110..2646
                     /locus_tag="JNZ89_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000205831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY8935541.1"
                     /translation="MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGEN
                     GAGKSTLIKALTGVYHADRGTIWLEGQVISPKNTAHAQQLGIGTVYQEVNLLPNMSVA
                     DNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAI
                     DLSAKVLILDEPTASLDT"
     gene            2650..3612
                     /locus_tag="JNZ89_001629"
     CDS             2650..3612
                     /locus_tag="JNZ89_001629"
                     /inference="COORDINATES: protein motif:HMM:NF012235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY8935542.1"
                     /translation="MELLFGLMRQLRDRGVSLIFVTHFLDQSYQVSDRITVLRNGSFV
                     GCRETRELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLE
                     VRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFC
                     PEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQ
                     PIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALL
                     VISSELEELVGYADRVIIMRDRKQVAEIRLAELSVPAIMNAIAA"
     gene            3626..4648
                     /locus_tag="JNZ89_001630"
     CDS             3626..4648
                     /locus_tag="JNZ89_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313234.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8935543.1"
                     /translation="MPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQV
                     VLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVA
                     EVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVT
                     FNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAG
                     VNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMG
                     GRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGV
                     RSRDKT"
     gene            4635..5630
                     /gene="yjfF"
                     /locus_tag="JNZ89_001631"
     CDS             4635..5630
                     /gene="yjfF"
                     /locus_tag="JNZ89_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease YjfF"
                     /protein_id="HAY8935544.1"
                     /translation="MIKRNLPLMITIGVFVLGYFYCLTQFPGFASTRVICNILTDNAF
                     LGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFG
                     AFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGG
                     RLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLST
                     GLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQG
                     LIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQR"
     gene            complement(5663..6661)
                     /gene="fbp"
                     /locus_tag="JNZ89_001632"
     CDS             complement(5663..6661)
                     /gene="fbp"
                     /locus_tag="JNZ89_001632"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HAY8935545.1"
                     /translation="MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAG
                     LVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
                     AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
                     YGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
                     KYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYEC
                     NPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA"
     gene            6837..8210
                     /gene="mpl"
                     /locus_tag="JNZ89_001633"
     CDS             6837..8210
                     /gene="mpl"
                     /locus_tag="JNZ89_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HAY8935546.1"
                     /translation="MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEK
                     QGIELIQGYDASQLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRD
                     RWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEAD
                     EYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRII
                     WPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLV
                     GEHNMHNGLMAIAAARHVGVAPADTANALGSFINARRRLELRGEANGVTVYDDFAHHP
                     TAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHI
                     PWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLA
                     KKAEAAQ"
     gene            complement(8293..8844)
                     /locus_tag="JNZ89_001634"
     CDS             complement(8293..8844)
                     /locus_tag="JNZ89_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HAY8935547.1"
                     /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
                     EIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALD
                     KLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE
                     GNKPPKSARQIFQYLRELAENEE"
     gene            8938..10290
                     /gene="pmbA"
                     /locus_tag="JNZ89_001635"
     CDS             8938..10290
                     /gene="pmbA"
                     /locus_tag="JNZ89_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HAY8935548.1"
                     /translation="MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTT
                     GISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARY
                     TSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEG
                     GSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQT
                     PEWVGVDCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFL
                     LDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSA
                     RKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGA
                     AGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
                     "
     gene            10474..10860
                     /gene="cybC"
                     /locus_tag="JNZ89_001636"
     CDS             10474..10860
                     /gene="cybC"
                     /locus_tag="JNZ89_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313240.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b562"
                     /protein_id="HAY8935549.1"
                     /translation="MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDNLKVVEKADN
                     AAQVKDALTKMRAAALDAQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLAN
                     EGKVKEAQAAAEQLKTTRNAYHQKYR"
     gene            complement(10905..11369)
                     /gene="nrdG"
                     /locus_tag="JNZ89_001637"
     CDS             complement(10905..11369)
                     /gene="nrdG"
                     /locus_tag="JNZ89_001637"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate
                     reductase-activating protein"
                     /protein_id="HAY8935550.1"
                     /translation="MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSG
                     QPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIW
                     VWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR"
     gene            complement(11468..13606)
                     /gene="nrdD"
                     /locus_tag="JNZ89_001638"
     CDS             complement(11468..13606)
                     /gene="nrdD"
                     /locus_tag="JNZ89_001638"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004128226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HAY8935551.1"
                     /translation="MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA
                     VVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEI
                     RGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH
                     YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH
                     IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY
                     EVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI
                     RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE
                     NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE
                     GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY
                     DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG
                     VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYSNIQHNLKALEDV
                     WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY
                     LGSPDARPFNAGKQEEVKRRVKHLGNGQIG"
     gene            complement(14000..15655)
                     /gene="treC"
                     /locus_tag="JNZ89_001639"
     CDS             complement(14000..15655)
                     /gene="treC"
                     /locus_tag="JNZ89_001639"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HAY8935552.1"
                     /translation="MTNPPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHK
                     LGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMV
                     FNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYY
                     LHLFAPEQADLNWENPAVRAVLKKVCEFWADRGVDGLRLDVVNLISKDPRFPDDLDGD
                     GRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFN
                     FHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFG
                     DEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELR
                     NDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALA
                     DDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSRE
                     IQPWQPGQMRGNWQLVMHNYEEASPQPCAMNLRPFEAVWWLQK"
     gene            complement(15705..17126)
                     /gene="treB"
                     /locus_tag="JNZ89_001640"
     CDS             complement(15705..17126)
                     /gene="treB"
                     /locus_tag="JNZ89_001640"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS trehalose transporter subunit IIBC"
                     /protein_id="HAY8935553.1"
                     /translation="MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANAR
                     PKEIEQLPMVKGCFTNARQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMK
                     WHEQLISHFAETFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFL
                     WLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDF
                     GMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHA
                     LIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQ
                     SMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGIN
                     LKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPNYWQVFALAMAIAI
                     IIPIVLTSFIYQRKYRLGTLDIV"
     gene            complement(17227..18192)
                     /gene="treR"
                     /locus_tag="JNZ89_001641"
     CDS             complement(17227..18192)
                     /gene="treR"
                     /locus_tag="JNZ89_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001181347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator TreR"
                     /protein_id="HAY8935554.1"
                     /translation="MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMN
                     QHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPEFYEQGYDPIMMESQF
                     SPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDE
                     GAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAM
                     KQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPE
                     IVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLSRSFPER"
     gene            18377..18430
                     /gene="mgtL"
                     /locus_tag="JNZ89_001642"
     CDS             18377..18430
                     /gene="mgtL"
                     /locus_tag="JNZ89_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_003933616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mgtA regulatory leader peptide MgtL"
                     /protein_id="HAY8935555.1"
                     /translation="MEPDPTPLPRRRLKLFR"
     gene            18571..21267
                     /gene="mgtA"
                     /locus_tag="JNZ89_001643"
     CDS             18571..21267
                     /gene="mgtA"
                     /locus_tag="JNZ89_001643"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HAY8935556.1"
                     /translation="MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTVVPPSLSAHCLK
                     MAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQLSPWWVHLWVCYRNPFN
                     ILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVL
                     RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLP
                     VEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQES
                     EPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLP
                     MIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS
                     GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR
                     RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQ
                     GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVK
                     ILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKER
                     IVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLE
                     EGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVS
                     QVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET
                     QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPL
                     ASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ"
     gene            complement(21473..21859)
                     /gene="ridA"
                     /locus_tag="JNZ89_001644"
     CDS             complement(21473..21859)
                     /gene="ridA"
                     /locus_tag="JNZ89_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="HAY8935557.1"
                     /translation="MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPA
                     DVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYETFFTEHNATF
                     PARSCVEVARLPKDVKIEIEAIAIRR"
     gene            complement(21932..22393)
                     /gene="pyrI"
                     /locus_tag="JNZ89_001645"
     CDS             complement(21932..22393)
                     /gene="pyrI"
                     /locus_tag="JNZ89_001645"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HAY8935558.1"
                     /translation="MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITI
                     GLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPER
                     IDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN"
     gene            complement(22406..23341)
                     /gene="pyrB"
                     /locus_tag="JNZ89_001646"
     CDS             complement(22406..23341)
                     /gene="pyrB"
                     /locus_tag="JNZ89_001646"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HAY8935559.1"
                     /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQPELLKHKV
                     IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
                     IVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAM
                     VGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEE
                     VMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIAT
                     DVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL"
     gene            complement(23345..23479)
                     /gene="pyrL"
                     /locus_tag="JNZ89_001647"
     CDS             complement(23345..23479)
                     /gene="pyrL"
                     /locus_tag="JNZ89_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyr operon leader peptide"
                     /protein_id="HAY8935560.1"
                     /translation="MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR
                     "
     gene            complement(23759..24154)
                     /locus_tag="JNZ89_001648"
     CDS             complement(23759..24154)
                     /locus_tag="JNZ89_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HAY8935561.1"
                     /translation="MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGT
                     PEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPEKQFEDIMTVKNEIFSAP
                     SYPTWTAVGVTWLAGFDFEIKVIARIPEL"
     gene            complement(24285..24998)
                     /gene="bdcA"
                     /locus_tag="JNZ89_001649"
     CDS             complement(24285..24998)
                     /gene="bdcA"
                     /locus_tag="JNZ89_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8935562.1"
                     /translation="MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA
                     ERLAQETGATAVFTDSADKDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRL
                     FKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
                     ARDFGPRGITINVVQPGPIDTDANPANGPMRDMSHSFMAIKRHGQPEEVAGMVAWLAG
                     PEASFVTGAMHTIDGAFGA"
     gene            25069..25662
                     /locus_tag="JNZ89_001650"
     CDS             25069..25662
                     /locus_tag="JNZ89_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8935563.1"
                     /translation="MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTD
                     YLGINPPSLYAAFGNKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLAEVLKEAAR
                     RYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFM
                     STVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE"
     gene            25807..26259
                     /locus_tag="JNZ89_001651"
     CDS             25807..26259
                     /locus_tag="JNZ89_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
                     /protein_id="HAY8935564.1"
                     /translation="MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRL
                     FYLISEDMTEPHEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAF
                     LPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPARVRKAVVKMLMA"
     gene            26382..27527
                     /locus_tag="JNZ89_001652"
                     /pseudo
     CDS             26382..27527
                     /locus_tag="JNZ89_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016234052.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
BASE COUNT         6604 a         6815 c         7279 g         6829 t
ORIGIN      
        1 tccagcaagt ggctatgaac agcaaaatgg tggtcgggtt tgcttgttct taccgttcaa
       61 gccttgcaac cgctgagaat aatgatggtg gaatagagag tttatttatc gcgggcataa
      121 aaaaaccctt actaaccgaa gcccggcgtt cagggttatt gcgctagaag aacttattta
      181 ttctttgcgc gctcgaagga agcaacgatt tcagctttag cggcttctgc gttttcccaa
      241 ccttcaactt tcacccactt gcctttttcg aggtctttgt agtgctcgaa gaagtgagcg
      301 atttgcgctt tcagcagttc aggcagatcg tttacgtctt taatgtgatc gtattctttg
      361 ctcagcttgc tgtgcggaac cgcaaccagt ttcgcatctt caccggcttc gtcggtcatt
      421 ttcagaacgc caaccggacg gcaacggatc acagaaccag gctgcagcgg gtacggagtc
      481 gggaccagta cgtcaaccgg gtcaccgtcc agagacaggg tgtggttgat gtaaccgtag
      541 ttgcacggat agaacatcgc ggtggacatg aagcggtcaa cgaacagtgc gccgctctct
      601 ttgtcgattt cgtatttgat cggatctgcg ttagccggga tctcaataac aacgtagatg
      661 tcttccggca gatctttacc cgcagggacg ttgagtaagc tcatgtctgt ttcctttaaa
      721 aatatgtggc aaacaagtgc cgagtattat agccaactcg cgccgaatgt ctttgcttgt
      781 tttcgtcttc attttccttt ttcgccagtt ttaagacggt atacagagca ggaaaatcca
      841 taaccgtagc cgcatttttc atagtgagat gaaagcgatt acaaacttgt gattaacgtt
      901 ttatttactt ttttgaagtg tgatgtaacg caatccgtta cataacgaat tgtctatagt
      961 tttttcgcga acatcttttc accaataata attaccccga cgaggacaac cctatgtgga
     1021 aacgcttact tgtagtctct gcagtctcgg cagccatgtc gtctatggcg ttggccgctc
     1081 cattaaccgt aggattttcg caggtcggat cggaatccgg ctggcgcgcc gcagaaacca
     1141 atgtggcgaa aagtgaggcc gaaaaacgcg gaattacgtt gaaaattgcc gatggtcagc
     1201 aaaagcagga aaaccggatt aaagcggtac gttccttcgt tgcacaaggg gtggatgcga
     1261 tctttatcgc tccagtggtt gcgacgggtt gggaaccggt attaaaagag gcgaaagatg
     1321 ccgaaatccc ggtcttcttg ctcgaccgtt ccatcgatgt gaaagacaaa tctctctata
     1381 tgaccaccgt tactgccgac aacatcctcg aaggtaagtt gatcggtgac tggctggtaa
     1441 aagaagtgaa tggcaaacca tgcaacgtgg tggagctgca gggcaccgtt ggggccagcg
     1501 tcgccattga ccgtaagaaa ggctttgccg aagccattaa gaatgcgcca aatatcaaaa
     1561 ttatccgctc gcagtcaggt gacttcaccc gcagtaaagg caaagaagtc atggagagct
     1621 ttatcaaagc ggaaaacaac ggcaaaaaca tctgcatggt ttacgcccat aacgacgaca
     1681 tggtgattgg tgcaattcag gcaattaaag aagcgggcct gaaaccgggc aaagatattc
     1741 tgacaggttc tatcgatggc gtaccggata tctacaaagc gatgattgat ggcgaagcga
     1801 acgccagtgt tgaactgacg ccgaatatgg cgggacccgc ttttgacgcg ctggagaaat
     1861 acaaaaaaga cggcaccatg cctgaaaagc tgacgttaac caaatccacc ctttacctgc
     1921 ctgataccgc aaaagaagag ttagagaaga agaaaaatat ggggtattga gggttgctat
     1981 gcctgatgcc gattcgtagg ccggataagg cgctcgcgcc gcatccggcg atggtgcact
     2041 gaagcctgat gcgacgctta ccgcgtctta tcatgcctac tgggagcacg ctttacaccg
     2101 ggggaaacca tgacgaccga ccaacaccag gaaatcctcc gcaccgaagg attaagtaaa
     2161 tttttccccg gcgtcaaagc gttagacaac gttgatttca gcctgcgccg tggcgaaatc
     2221 atggcgctgc tcggtgaaaa cggggcggga aaatcaacgc taatcaaagc attaactggt
     2281 gtataccacg ccgatcgcgg caccatctgg ctggaaggcc aggttatctc accgaaaaat
     2341 accgcccacg cgcaacaact cggcattggc accgtctatc aggaagtcaa cctgctaccc
     2401 aatatgtcgg tcgctgataa tctatttata ggccgcgaac ccaaacgctt cggccttcta
     2461 cgccgcaaag agatggaaaa gcgcgccacc gaactgatgg catcttacgg tttctccctc
     2521 gacgtgcgcg aaccgctcaa ccgcttttca gtcgcgatgc agcaaatcgt cgccatttgc
     2581 cgggctatcg atctctccgc caaagtgctg atcctcgatg aacccaccgc cagcctcgac
     2641 acctaggaag tggagctatt atttggcctg atgcgtcagt tgcgcgatcg cggcgtcagc
     2701 ctgatctttg tcactcactt tctcgatcag agctatcagg tcagcgatcg gatcaccgtt
     2761 ttacgcaacg gcagtttcgt aggctgtcgg gaaacgcgcg agctaccgca gatcgaactg
     2821 gtaaaaatga tgctggggcg cgagctggat acccacgcgc tacagcgtgc cgggcgaaca
     2881 ttgttgagcg acaaacccgt tgccgcgttc aaaaattacg gcaaaaaagg aacgatagca
     2941 ccgtttgatc tcgaagtgcg ccccggcgag atcgtcggcc tggcaggctt gctgggatcc
     3001 ggacgtaccg aaaccgccga agtgatcttc ggtatcaaac ctgctgacag cggcacggcg
     3061 ttgatcaaag gcaaaccgca aaacctgcga tcgccacatc aggcttcggt actgggcatc
     3121 ggcttctgcc cggaagacag gaaaaccgat ggcatcatcg ctgccgcctc ggtgcgggaa
     3181 aatatcatcc tcgctctcca ggcccagcgc ggctggctac gacccatttc ccgcaaagag
     3241 cagcaagaga ttgccgaacg ctttatccgc cagcttggca ttcgcacacc ttcaactgaa
     3301 caaccgattg aatttctctc cggcggcaat cagcaaaaag tgttgctttc acgttggcta
     3361 ctgacccgac cgcaatttct gatcctcgat gagccaaccc gtggcattga tgttggtgcc
     3421 cacgccgaga tcatccgcct gattgaaacg ctatgcgccg atggtctggc gctgctggtg
     3481 atctcctccg aactggaaga actggtgggc tatgccgacc gggtgatcat catgcgcgat
     3541 cgcaaacagg tggcggagat ccggctggca gagctttccg ttccggctat catgaacgcc
     3601 attgcggcgt aaggagaaca gtgtgatgcc tcaatctctt ccggacacca ctacgccaaa
     3661 aaggcgcttt cgctggccga cggggatgcc gcagctggta gcactattgc tggtgctgct
     3721 ggtcgacagc ctggtagccc cgcatttctg gcaggtagtg cttcaggatg ggcgtttgtt
     3781 cggtagcccc atagacattc ttaaccgtgc agcccccgtt gcgttactgg cgattggtat
     3841 gacgctggtg atcgccaccg gtgggattga tctctccgta ggggcggtga tggctatcgc
     3901 cggagccaca acggctgcga tgacggtcgc ggaagtcagc ctgccgattg ttttgttaag
     3961 cgccctaggc accggcatcc tggcgggatt gtggaacggc atactggtag cgatcctcaa
     4021 aattcagcca tttgtcgcca ccctgatcct gatggtcgcc gggcgcggcg tggcgcaact
     4081 gatcacctcc ggacagatcg tcacgtttaa ctcgccggat ctctcatggt ttggcagtgg
     4141 atcgctgttg ttcctgccaa cgccagtcat tattgcggta ctgacgcttc tcctgttctg
     4201 gctgttgacc cgcaaaacgg cactggggat gtttatcgaa gccgttggta tcaacattcg
     4261 ggcggcaaaa aatgccgggg taaacacgcg gatcatcgtc atgctcactt atgtgttgag
     4321 cgggctgtgt gcggcgattg cgggcattat cgtggcggcg gatattcgcg gtgccgatgc
     4381 caacaacgcc ggattatggc tggagctgga cgccattctc gcggtggtga ttggcggcgg
     4441 atcgctgatg ggcgggcgct ttaacctgct gctctcggta gtgggggcgc tgattattca
     4501 ggggatgaac accggaattt tgctttcggg ctttccaccg gagatgaacc aggtggtgaa
     4561 agcggtggtg gtgctttgcg tgctgattgt ccagtcgcaa cgctttatca gtctgattaa
     4621 aggagtacgt agccgtgata aaacgtaatt tgccactgat gatcaccatc ggcgtctttg
     4681 tgctgggcta tttctactgc ctgacgcagt ttcccggttt tgcttccaca agagtgatct
     4741 gcaatatcct gaccgataac gcttttctgg ggattattgc cgttggtatg acctttgtga
     4801 tcctctctgg cggtatcgat ctctccgtcg gttcggtgat cgcctttact ggcgtgtttc
     4861 tggcaaaagt ggttggcgat ttcggcctct cgccgctgct ggcgtttccg ctagtgctgg
     4921 tgatgggctg tgccttcggc gcatttatgg ggcttctgat cgacgccctg aagatcccgg
     4981 catttatcat tacgcttgcg gggatgttct ttttgcgcgg cgtcagctat ctcgtttcgg
     5041 aagagtcgat tccgataaac catcccattt atgacacgct ctcaagcctt gcgtggaaaa
     5101 tccccggcgg cggtcgcctt agtgcgatgg ggctgttgat gctggcggtg gtggttatcg
     5161 gtattttcct tgcgcatcgt acccgttttg gcaatcaggt gtacgctatt ggcggcaacg
     5221 cgacgtcggc gaacctgatg gggatttcta ctcgcagcac tactattcgc atttatatgc
     5281 tctccaccgg actggcaaca ctggcgggga ttgtcttctc gatttatacc caggccggat
     5341 atgcactggc gggcgtaggt gtggaactgg acgccatcgc gtcggtggtg attggcggta
     5401 cgttgttaag tggtggcgtc gggacggtgc ttgggacgct ttttggcgtg gcaattcagg
     5461 gactgatcca gacttacatc aactttgacg gcacgctgag ttcctggtgg acgaaaatcg
     5521 ccatcggtat tttgttgttt atttttatag cattacagcg tgggttaacg gtgctgtggg
     5581 agaatcgtca gagttcgcca gtgacaagag tcaacattgc gcagcgataa aaatgcctct
     5641 ccgtgtggag aggcgcagga gattacgcgt ccgggaactc acggataaag cgttcgacat
     5701 cttcaaccat atggtcgttg ccgacaaaga acgaacggcg ctggtgcaga gtttccggga
     5761 tgatatccag aatacgctct ttgccatcgc tcgctttacc gcccgcttgt tccgccagga
     5821 atgccatcgg gttgcactca taaagcaaac gcagtttgcc gtccgggtgg ctggcggtgc
     5881 ttgggtagag ataaataccg cctttcagca ggttacggtg gaaatccgca accagtgaac
     5941 cgatataacg tgaggtatac gggcggttgg tggatttatc ttcttcctgg cagaatttaa
     6001 tgtacttctt caccccgttc ggaaacttaa tgtagtttcc ttcgttgatg gagtaggttt
     6061 tgcctttctc cgggaagcgc atccgttcct ggcacaggca gaaaacgccc agcgaaggat
     6121 cgtaagtaaa ggcgtgaaca ccgcatccgg tggtgtaaac cagcatggta gaggagccgt
     6181 ataccacgta acctgccgca acctgtttgt taccaggctg gaggaaatct tcttccgtta
     6241 ccggcgtgcc gacgggcgta actcggcggt agatggagaa aatggtaccg acagagacgt
     6301 taacatcgat gttggacgag ccatccagtg ggtccatcag caccacgtat tttgcatgtt
     6361 cacagccttc aaagacaaca atctcatctt cttcttcaga ggcaatgcct gcaacgatat
     6421 cgcgtgcttt cagtgcggct ttcagttttt cattagcgaa caagtcgagt ttttgctgaa
     6481 cctcgccctg cacgttctca gcaccgctgg cacccaggat atcaaccagt cctgctttgt
     6541 tgatatcgcg atggataatc ttggcgccca gttttattgc cgacagcaaa gcagtgagct
     6601 caccggtagc atgagaaaac tcgtgctgct tttcgacaat aaattcacct aacgttttca
     6661 taaaactttc cctgcaatgt ttatggagta aagcgaccgc aacaatctta acaaataatc
     6721 tcaatgttgc gctcaggtga atcgcgccag caaattacgg attatcctga aatgcgtttc
     6781 tcacttgccc gacatatgcg taaaatgagc ggcagattaa aaaaggatag tgacgtatgc
     6841 gcattcatat tttaggaatt tgtggcacgt ttatgggcgg tctggcgatg ctggcgcgcc
     6901 agttaggcca tgaagtaacg ggttcggacg ccaatgtgta tccgccgatg agcaccttac
     6961 ttgagaagca aggcattgaa ctgattcagg gttacgatgc cagccagctc gatccgcagc
     7021 cggatctggt gattattggc aacgccatga cccgtggaaa tccgtgtgtg gaagcggtac
     7081 tggaaaaaaa catcccttat atgtcaggtc cacagtggct gcacgatttt gtgctgcgcg
     7141 accgctgggt gctggccgtt gccggtacac acggcaaaac caccaccgcg ggaatggcga
     7201 cctggattct ggaacagtgt ggttacaaac cgggatttgt gatcggcggt gtgccgggga
     7261 actttgaggt ttcggcgcgt ctgggcgaaa gcgacttctt tgttatcgaa gcggatgagt
     7321 acgactgcgc cttcttcgac aaacgctcta aatttgtcca ttactgcccg cgtacgctga
     7381 tcctcaacaa ccttgagttc gatcacgccg atatctttga cgacctgaaa gcgatccaga
     7441 aacagttcca ccatctggtg cgtatcgttc cggggcaggg ccgtattatc tggccggaaa
     7501 atgacatcaa cctgaaacag accatggcga tgggctgctg gagcgagcag gagctggtgg
     7561 gtgagcaggg gcactggcag gcgaaaaagc tgaccactga tgcttccgaa tgggaagtct
     7621 tgctggatgg cgaaaaagtg ggcgaagtga aatggtcgct ggtaggcgaa cataatatgc
     7681 ataatggcct gatggcgatt gcggcggccc gccatgttgg cgtagcgccg gcagataccg
     7741 ctaacgcgct gggttcgttt attaatgctc gtcgccgtct ggagttgcgt ggtgaagcga
     7801 atggcgtcac ggtatatgac gattttgccc atcacccgac ggcgattctg gcaacgctgg
     7861 cggcgctgcg tggcaaagtt ggtggtacag cgcgcattat tgctgtgctg gaaccgcgct
     7921 cgaataccat gaaaatgggg atctgcaaag acgatttggc accttcatta ggtcgtgccg
     7981 atgaagtctt cctgctgcaa ccggcgcata ttccgtggca ggtggcagaa gtggcagaag
     8041 cctgcgttca gcctgcacac tggagtggcg atgtggatac gctggcagat atggtggtga
     8101 aaaccgctca gcctggcgac catattctgg tgatgagcaa cggcggtttt ggtgggatcc
     8161 atcagaaact gctggatggt ctggcgaaga aggcggaagc tgcgcagtaa ttcggcctca
     8221 gcctgagata gcattgccgg ataaggcgtt tacgccgcat ccggcaaacc atactcacat
     8281 caacaacgaa aattactctt cattctccgc cagttcgcgc agatactgga aaatctggcg
     8341 tgcggatttc ggcggcttat tcccttcttt ctctttcttc gcgttgcgga tcagagtacg
     8401 cagttgctga cgatcggcat cgggccacag atttaatacc tcagcgatgg cgtcatcacc
     8461 ttgatcgatc agacgatcgc gcaggttttc cagtttatgg aacagcacca cctgctggtt
     8521 gtgacggttt ttcagcttat ccagcgcctg acggatcggt tctacatcgc gctggcgcag
     8581 catcttaccg atgagctgca actggcggcg gcgaccttcc atcttaatac gctgggcgag
     8641 ctcaatagcc gcgcgcagat ccgcatctaa cgggatctta tccagcgcgt ttttccccag
     8701 atcaacaatt tccgcgccaa ggcgttttag ctcctcggca tcacgtttaa tttcactttt
     8761 actgacccag ataatttcat cgtcttcgtc ttcgatgtca tcaccgggaa cgtcgtcgag
     8821 ccagtcttcg ggctgcttag tcatctcagg ctccttaaaa aaagaggcta atgttaccag
     8881 ttaagatgcg cactgaaaaa cggttctctg ttagacttca gagaaactct ctacattatg
     8941 gcacttgcaa tgaaagtaat ctctcaagtt gaagcgcagc gcaagattct ggaagaagca
     9001 gtttccactg cgctggagtt ggcctcaggc aaatcggacg gtgcggaagt tgccgtcagc
     9061 aagaccaccg gcattagcgt aagcacgcgt tatggtgaag tggagaatgt tgaattcaat
     9121 agcgatggcg cgctggggat cactgtttat caccagaacc gcaaaggtag cgcatcatcc
     9181 accgatttaa gcccgcaggc cattgcccgt actgtacagg cggcgctgga tattgcccgt
     9241 tatacctcgc cagatccctg tgccggcgtg gcagacaaag agctgctggc ctttgacgca
     9301 ccagatctcg acttgttcca ccctgcggaa gtttccccgg atgaagccat tgaactggcg
     9361 gcccgcgcag aacaggcggc attgcaggcg gacaaacgca tcaccaatac cgaaggtggc
     9421 agctttaaca gccactacgg tgtcaaagtt tttggcaaca gccacggcat gttgcagggt
     9481 tactgctcaa cgcgtcattc gctctccagc tgtgtaattg ccgaagaaaa tggcgatatg
     9541 gagcgtgatt acgcctacac cattggtcgt gcgatgagcg atctgcaaac gccagagtgg
     9601 gttggggtcg actgtgctcg ccgtacttta tcgcgcctgt caccgcgtaa actctccacc
     9661 atgaaagcgc cggtcatttt tgccaatgaa gtggcaaccg ggctttttgg ccatctggtg
     9721 ggggcgatag cgggtggatc ggtttaccgt aaatctacct tcctgctgga ttcgctgggt
     9781 aaacaaattc tgccggactg gctgaccatt gaagagcatc cgcatctgct gaaagggctg
     9841 gcgtcgacgc cattcgacag cgaaggtgtg cgcaccgagc gtcgcgatat tattaaagat
     9901 ggcatcctga ctcagtggct gctgaccagc tattcggcgc gaaaactggg gctgaaaagc
     9961 accggacatg cgggcggtat tcacaactgg cggattgccg gacaaggtct aagcttcgag
    10021 cagatgctca aagagatggg caccgggctg gtggtgacgg aattgatggg ccagggcgtg
    10081 agtgcaatta ccggtgatta ttcccgtggt gcggcgggct tctgggtaga aaacggcgaa
    10141 attcagtatc cggttagcga aatcaccatc gcaggtaatt taaaagatat gtggcgcaat
    10201 attgtcaccg tcggtaacga tattgaaaca cgcagtaata tacagtgtgg ttctgtgctg
    10261 ttgccggaga tgaaaatcgc cggacagtaa aaaaactggc gcgacctgtc gcgctataaa
    10321 ctaaaaaatt acacaaaatc attcgcactg catcgagacg gaaagtgaat gagggccggg
    10381 gagcgtactc gcagtacgtg acccggtcga atgagcgtag tcgtcgatga ggcagtgtga
    10441 atgatgaagt gtaaataaaa aaggaagtga gcaatgcgaa aaagcctgtt agctattctt
    10501 gcagtctcct cgttggtatt cagttcggcg tcgtttgccg ctgatcttga agacaatatg
    10561 gaaaccctca acgacaattt aaaagtggtc gaaaaagccg ataacgcggc gcaagtcaaa
    10621 gacgcgttaa cgaagatgcg cgccgcagcg ctggatgcgc aaaaagcaac gccgccgaag
    10681 ctcgaaggca aatcaccgga cagcccggag atgaaagact tccgtcacgg tttcgatatt
    10741 ctggtcggtc agattgacga cgcgctgaag ctggcaaatg aaggtaaagt aaaagaagcg
    10801 caggctgccg cagagcaact gaaaacgacc cgcaacgcct atcaccagaa gtatcgttaa
    10861 ttcctcattt ccctgttgcc tgcactcagg taacagggaa cttatcatcg caaatgatgc
    10921 accacctgat tgctgctgcc gcgccagatc agggaagggt cttttaaatc ctgcacaaat
    10981 ttgccgtcga ccagcacgtt aatcaaatca acaacctgca tttgcgctgc gttgagttcg
    11041 tcgagtttat agcctgtcca cacccagatg tctttacccg gacactcggc gcggatgcgt
    11101 tgtaccagtt tcagaatatc cggcacgttt tgcggatgca gcggatcgcc gccggagagg
    11161 gaaataccct ggcgtttgat acgagtgtca ttcagatcgt taatgatctg gtcttccatt
    11221 gctttagtaa atggctgacc ggaatttacc cgccatgtgc ttttgttata gcaaccgggg
    11281 cattcatgaa cacacccgga gacaaacaga gtgcaacgag tgccggggcc gttgacgatg
    11341 tcgacaggat agtactgatg ataattcatt atttcgcctg gcttatcagt ccgcgtgtag
    11401 actgcatccg gtaatcaatg cctgatgcga cgctttcaca tcacatccgg catttgctta
    11461 gtgcagatca acctatctgc ccatttccca aatgtttaac gcggcgctta acttcttcct
    11521 gcttgccggc gttaaacgga cgtgcatccg ggctacctaa atatccgcac acgcggcgag
    11581 ttaccgacac acgggaggcg tcatggttac cacatttcgg gcaggtgaag cctttgctgg
    11641 tgcactcgaa ctcaccggta aagccacact cgtagcactc atcaatcggt gtattggtgc
    11701 cgtaatacgg tacatgctga tagctgtaat cccagacatc ttccagcgcc ttcaggttgt
    11761 gctgaatgtt tgaatactcg ccgtagcaaa tgaaaccacc gttcgccagc ggcgggtaag
    11821 gcgcttcaaa gtcgatcttg tcgtacgggt tcaccttctt ctccacatcg aggtggaaac
    11881 tgttggtgta gtaaccttta tcggtcacgc ccggcaccac gccaaactca gcagtatcga
    11941 gacggcagaa gcggtcgcac aggttttcac tcggcgtgct gtagagactg aaaccataac
    12001 ccgtttcttc cttccactga tccactgcct gacgcagacg ttcaacaatg gcgatacctt
    12061 tcgcgcgaag ctgctcgttg tcgtaaacat gctcgccgcc gaacagcgcg ttaatggttt
    12121 cgtggatgcc gatgtaaccc agcgaaatag acgcacgacc gtttttgaag atttcagaaa
    12181 catcatcgtc agcattgaga cgcacgccac aagcaccttc catatagagg atcggggcca
    12241 cgcgcgcttt cacgccttcg agacgagcga tacgggtcat cagcgcctta cgtgccagca
    12301 ccagacgttc atccagcagc ttccagaagg tggcttcatc gccttttgct tccagagcaa
    12361 tacgcggcag gttcaggctg atcacgccga ggttgttacg accatcgtgg atctgctcgc
    12421 cgttttcatt ttcccacacg ccgaggaagc tgcggcagcc catcggagtt ttaaacgaac
    12481 cggtgacttt cactacctga tcgtagttca ggatatccgg atacatgcgc ttgcttgcgc
    12541 actccagcgc cagctgtttg atgtcgtagt tcggatcgcc ttttttatgg ttcaggccat
    12601 cgcgaatcgc aaacaccagt ttcgggaaca ccgcagtttt acggttttta ccgaggcctg
    12661 cgatacggtt acgcaggata gattcctgaa tcaggcgcga ctcccagctg gtgcccagac
    12721 caaaaccaaa ggttacaaac ggcgtctgac cgttggcggt gtgcagggtg tttacttcgt
    12781 actccagcga ctggaaggca tcgtagcact ctttaatggt acgagagtta gcgtagcctt
    12841 cggcgtccgg gatgttccac tcttctgcgg tcttgcgatg tttgttgtag ctggcggtga
    12901 caaacggtgc cagcacttca tcgatacggt taatggtggt gccgccataa atatggctgg
    12961 cgacctgagc aataatctgc gcagttacag cggttgccgt agagatcgac ttcggcggtt
    13021 caatctcggc gttccccatc ttaaagccct gggtcagcat gcctttcagg tcgatcaaca
    13081 tgcagttgaa catcgggaag aacggcgagt aatcgagatc gtgatagtga atatcgccac
    13141 gctcatgtgc ctgcaccacg tcacgcggca gcaggtgctg acgtgcatag tgtttagcca
    13201 cgatcccggc cagcaggtcg cgctgggttg gaatcacctt gctgtctttg ttggcgtttt
    13261 cgttgagtaa cgaggcgttg gtctgctcga ccagaccacg gatctcctga ttcaggcgac
    13321 cgcgtttttc acgttcaatg tcgcgatcgt gacggtactc gatgtaagca cgagccagtt
    13381 gtttgtatgg acctgacatc agctggtttt caacagcggt ctggatctca ttgatatcca
    13441 cctggttgcg gccctgcatc tgctcgctga caactgcagc aacagtggcg caataatcgg
    13501 catcatcgac ttccgctgct ttagctgcac gcagaatcgc ttctttgatg cgctctgatt
    13561 taaacggcac tttgcagccg tctcgtttca tcacatgcgg tgtcatgatc gctccatatt
    13621 tttaagaaca ggttatccac agaaattggg aaaggcgttt tccggttttt tcgtttcgtt
    13681 ttccggtgct ttccgcaatc gccatccgct tttccacaac gccgcacctt tttcgtgggg
    13741 agctgtagta gcaattatag tcgattaata caacatattg ggttgggacg cattttaaag
    13801 tctatatata gtgctttgca tcaaggatgt ttgaactttt tttgatgtag ctcaaagtaa
    13861 aaagcagagc gtacggatga cgggcgctac agcgttatgt aaatttttta atgaatttgc
    13921 tggttgaaaa ataaacaaaa acaacatgct gacagacaaa accccggaat gaccggcatt
    13981 accggggctt agggaagatt tacttctgta accaccagac agcctcaaaa ggccgtaaat
    14041 tcatggcaca gggttgtggt gaggcttctt cgtagttatg catcacaagc tgccagttgc
    14101 cgcgcatttg ccctggctgc cagggttgga tctcacggct aaggttggca atgaccagca
    14161 aggtttgccc cttccattca cggcgatagc accacaatac agggctgttt ggcagcagat
    14221 cctggtaatt gccccatgtc aggatggctt cctgcttacg cagtgcgatt aacttttggt
    14281 aggtgtaaaa caccgaggaa tcatcggcca gcgcggcttc tacgttgatt tgttgatagt
    14341 tatcacccag gccaatccac ggttcgccag ccgtaaatcc ggcattatcg ccgttgctcc
    14401 attgcatggg cgtgcggctg ttgtcacggg atttactggc gaggattgcc aataactcgt
    14461 cggcatcacg accatcgttg cgcagctcgg caaacatatt gaggctctct acgtcgcgat
    14521 agtcagtaat gcgcgtgaaa tgcgggttgg tcatgccaat ctcttcgccc tggtagatat
    14581 acggcgttcc ctgcatgcca tgcagcacca tcgccagcat ttttgccgca ggcacgcggt
    14641 attcaccttc atcaccaaag cgagaaacaa tgcgcggctg atcgtggtta caccagaaca
    14701 aggcattcca tgctacgttg tgcattcctt gttgccagtg gcggaacaat gttttcaacg
    14761 ccacaaagtc aggtttagcc agcgtccatt tttcaccacc gggataatcg accttcaggt
    14821 gatgaaaatt aaaggtcatc gacaattcac tgcctgtcag tgccgcgtat cgctggcaat
    14881 gctcaaggct ggtggaggac atttcaccta cggtcattaa cccgcgtggc gtaaacacat
    14941 cgcggttcat ctcgtgcaaa aactcgtgtg ctcgtggccc gtcggtgtag aagcgacgcc
    15001 cgtcgccatc caggtcatca gggaaacgcg ggtctttgga gatcagattc accacatcca
    15061 ggcgcaaccc gtcgacccca cgatcggccc agaactcaca gacttttttc agcactgcgc
    15121 gtaccgctgg attctcccag ttgagatccg cctgttctgg tgcaaagaga tgcaaatagt
    15181 actgttcgct ttccgcatgc cagcgccacg cactaccgcc aaattttgaa cgccagttgt
    15241 tcggtggcgt ttctggttct ccatcgcgcc agatataaaa ctggcggtaa gggctttctt
    15301 tgttcagcgc ctcgcgaaac caggcatgtt gggtagaggt atggttaaac accatatcga
    15361 gaatgatacg aatcccgcgc gattttgcct gcgtcaccag ttcgtcaaaa tcgtccagcg
    15421 tgccgtaggt gggatcaatc gccgtatagt tcgctacgtc gtaaccgtta tcgacctggg
    15481 gagagacata aaagggggtt agccagatgg catcaacgcc cagtttatgc agatagtcca
    15541 ggcgttggat aacgccacgt aaatcgccgg taccgctacc cgtggtgtcc tgaaaactct
    15601 ttggataaat ctggtagata acgccgtttt gccaccagtg gggaggatta gtcattacgt
    15661 tattcctgca aatgcgaggg ggcgcaattg cgccccgaag aaaattaaac aatgtccagc
    15721 gtgcccaggc ggtatttccg ctgatagata aacgaggtga gtacaatcgg gatgatgatg
    15781 gcgatagcca ttgccagcgc aaacacctgc cagtagttcg gttgaatcga gagaattccc
    15841 ggcaggccgc ctacgccgat gccattcgcc ataacgccgt tcaggccgca tagcaatcct
    15901 gccagaccag aaccaatcat cgcgcacagc atcgggaagc gatatttcag gttgatgccg
    15961 tacattgcag gctcagtgac cccaagccag gcggagatcg ccgcaggcac ggagatctcg
    16021 cgttcattgt gcttgcggct ggaaatgata atgccgatca cggcggagcc ctgagcgata
    16081 ttcgacagcg caatcagtgg ccacactggc gtaccaccca tgctttgaat catctgcaaa
    16141 tcaatagcaa gcgtggtctg gtgtaccccg gtgatcacca gcggggcgta caggaagcca
    16201 aacaatgccg cgccaatcgg agcaaagctg ccggtcatca ggtgacgtac cgcaaaggca
    16261 acgccatcgc caatcatgcg accaaacgga ccaatcagcg catgggcgag gaacaccgcg
    16321 aggatcagcg aacagacggg caccaccacc agatagaggt aatctggcac gatgcgttta
    16381 aggcgagttt caataacgcc cagcgccagc ccggctaaca gtgccgggat cacctgcgcc
    16441 tgatagccca ctttggcgat gctgaacatg ccaaagtccc acacttccgg cagctgctgc
    16501 ccgagcagat aagcgttcat cagttggggg gaaaccagtg tcacgccaag cacgatacca
    16561 aggatcggtg tgccgcccat ttttttcacc gctgaccagc aaatcccgac cggcaggtag
    16621 aagaagatcg cttcaccgat caaccacaga aaatcgtaga tcgtttgcag ggaagggtac
    16681 atttgcgcca gcgtttgacc gttgctcatg ggcaaatcgc cgatcacatt gcgaaaaccg
    16741 aggatcaaac cgccgctaat caacgcgggc agcaacggga agaaggtctc tgcgaaatga
    16801 gagatcaact gctcatgcca tttcatattc tgccgggcgg ctttttttac ctgctcttta
    16861 tcaacctgcg cctgtccggt tgacgctatc agtgcttgat agtagtcacc cacgttggtg
    16921 ccaatcacca cctgaaattg cctggcattg gtgaaacagc ctttcaccat ggggagttgc
    16981 tcaatttctt tcggtctggc attggccggt tggttgagga caaagcgtag gcgagtaata
    17041 cagtggctca ccgtcgcaat attgccgcgc ccgccgacca gttcaatcaa ccgatcgata
    17101 tccgtttggt ttattttgct catcataaag ccccatggca gatgacattt ttggttggct
    17161 gcagaatata ttgcgcggaa aaatttaaaa acgggaacgt tcccgaaacg cagcgaagat
    17221 cacaatttat cgttcaggaa acgatctgga cagggtggcg gggatgatga tttgttgcgg
    17281 ttcgctgcgc ccggttacct gtgcgatcaa ctggcaggcc gcctggcgtc cagcttcggc
    17341 gtaaccggga tctacggtga cgatctccgg atggaggaat ttcattaacg gcgtattacc
    17401 gacgctcgcc agttgcaagg tgtcgatgcg ttgctcttgc aggtatttac ttgcgccaag
    17461 tgccagcgtg tcggttgcgc acagtaaggc ggtagtttca ggcgtaatca cttttgctac
    17521 gttctcatag ccttgcttca tagcaaggcc tggcagagcg gcaacgggat gcagtttatg
    17581 cgctttgcag aacgccaggt aggcttcgtg acgtcgctta ccggtcgtca cgtcactgtg
    17641 cggcacgccg agataactga tattacgatg cccctggtca tacagccgtt gcatcaggat
    17701 cttgattgcc ccttcgtcgt cataacagac cgaagcaaag ccttttgcgt cacgcgccag
    17761 cagaaccagc gatgactgcc agtgggctaa catttcttct gttatgccgg taaaaccgaa
    17821 cagcactacg ccgtcgatat tacgccgttt cagcaccccc aaatgttcgg caactaattg
    17881 cggggaaaac tgactttcca tcatgattgg gtcgtaacct tgttcataga actctggcag
    17941 catggtttga acggcgagat tttctgacaa cgaatccagg cgggtaacaa tgatggcgac
    18001 cactttatcg ctttgcccac gcatagcgcg cgcagagcgg gaaggggaaa atccatgctg
    18061 attcatcact gcttcaacac gctcgcgggt gcgctggctc acgccgcttt cgttattcag
    18121 cacccgggaa actgtagatt tccccacgcc gcttaagcgc gcgatgtctt tgatggtcag
    18181 ccgattttgc atcctgttgt cctgtaacgt gttgtttaat tatttgagcc taactttacc
    18241 cgtgcattca gcaatgggta aagtctggtt tatcgttggt ttagttgcca gcaggtatta
    18301 tatcgccata gatgctacga atattattgg attctcctta ttatttgcgg cgcttttttc
    18361 acttaccgga ggttatatgg aacctgatcc cacgcctctc cctcgacgga gattaaaact
    18421 tttccggtaa gcccgtcttt tcacggcgtt accggatgcg taaggccgtg acgttttaac
    18481 gtccctgctc agctttatta ccttcaggta aggcttcgcc acgcctgaag acatttctgt
    18541 actgtttcag acagtgcgga gggactcctt atgtttaaag aaatttttac ccggctcatt
    18601 cgccatttac cttcccgtct ggttcatcgt gatccattgc ctggcgcgca gcagacagtg
    18661 aatacggtgg tcccgccgtc cttaagtgcg cattgcctga aaatggcggt gatgcccgaa
    18721 gaagaattgt ggaaaacgtt cgacacccat ccggaagggt taaatcaggc ggaagtggaa
    18781 tctgcccgcg aacaacatgg tgaaaataaa ttacccgcac aacaactgtc gccgtggtgg
    18841 gtacatttat gggtctgcta tcgcaacccc tttaatattt tactcaccat tctcggcgct
    18901 atttcttacg ccacggaaga tttatttgct gcgggcgtta tcgcgctaat ggtcgctatt
    18961 tctacgttgc tgaactttat tcaggaagca cgttccacta aagcggcaga tgccctgaaa
    19021 gcgatggtca gcaataccgc gacggtgctg cgcgtaatta acgacaaagg cgaaaatggc
    19081 tggctggaga tcccgatcga ccagctggtg cccggcgata ttataaaact ggcggcgggg
    19141 gatatgatcc cggcagattt acgtatcttg caagcgcggg atctgttcgt cgctcaggcg
    19201 tcgttaaccg gtgagtctct gcccgtggaa aaagccgcta ccactcgcca gccggagcac
    19261 agcaatccgc tggagtgcga cacgctgtgt tttatgggca ccaccgtggt gagcggcacg
    19321 gcacaagcaa tggtgattgc tacaggtgcc aatacctggt ttggtcaact ggcggggcgt
    19381 gttagtgagc aggaaagcga gccgaatgcc tttcagcaag ggatcagccg cgtcagtatg
    19441 ctgctgattc gctttatgct ggtgatggca ccggtggtgc tgttaatcaa tggctacacc
    19501 aaaggcgact ggtgggaagc ggcgctgttt gcgctttcgg tcgcggtagg cctaacgccg
    19561 gaaatgttgc cgatgattgt tacctcgacg ctggcgcgcg gcgcagtaaa gctgtcgaaa
    19621 cagaaagtga tcgtcaaaca tctggatgct attcagaact ttggcgcaat ggatattctg
    19681 tgcactgata aaaccggcac cctgacgcag gataaaattg tgctggagaa tcataccgat
    19741 atctccggta aaaccagcga acgcgtgctg catagcgcgt ggttgaacag tcattatcag
    19801 accggactta aaaacctgct cgatacagcg gtgctcgaag gtacggatga agagtcagcg
    19861 cgctcgctgg ccagtcgttg gcaaaaaatc gatgagattc cgtttgattt cgagcgtcgc
    19921 cggatgtcgg tggtagtggc agaaaatacc gagcaccatc agctggtttg caaaggtgca
    19981 ttgcaggaaa tcctcaatgt gtgttcgcag gtgcgtcaca atggcgagat tgtgccgctc
    20041 gatgacatca tgctgcgtaa gattaagcgg gttactgata cgctgaatcg tcaggggctg
    20101 cgcgtggttg cggtggcgac gaaatacctg ccagcgcgtg aaggagatta ccagcgggcg
    20161 gatgaatccg acctgatcct cgaaggatat attgcttttc ttgatccgcc aaaagagaca
    20221 accgctccgg cactgaaggc attaaaagcg agtggaatta ccgtaaaaat ccttactggc
    20281 gacagtgagt tagttgcagc gaaagtgtgc catgaagtgg ggctggacgc gggagaggtg
    20341 gtcattggta gtgatattga aacgctatct gacgacgaac tggcaaatct tgcacagcgc
    20401 accacgctgt ttgcccgcct gacgccgatg cataaagaac gcattgtgac cttactgaag
    20461 cgcgaagggc atgtggttgg ctttatgggc gatggtatta atgatgcgcc cgccttacgc
    20521 gcggcggata tcggcatttc tgtggacggc gcggtagata ttgcccgtga agcggctgat
    20581 atcatcctgc tggaaaaaag cctgatggtg ctggaagagg gggttattga gggacgtcgc
    20641 actttcgcca acatgctgaa atacatcaaa atgacggcga gttctaactt tggtaatgtg
    20701 ttcagcgtgc tggtggcgag tgctttcttg cccttcctgc cgatgttgcc gttacacttg
    20761 cttattcaga acctgctgta cgatgtgtca caggtggcga tcccgtttga taacgtcgac
    20821 gacgagcaaa ttcaaaagcc gcagcgttgg aatccggcgg atctggggcg ctttatgatc
    20881 ttcttcggac cgatcagctc gatcttcgat attctgacgt tttgcctgat gtggtgggta
    20941 ttccatgcca acacgccgga aacgcaaacg ctgttccagt cgggatggtt tgtggtgggc
    21001 ttactgtcgc aaacgctgat tgtgcatatg atccgcaccc gccgtgtgcc gtttattcag
    21061 agctgtgcat cgtggccgtt aatgatcatg accgtgatcg tgatgattgt cgggatcgca
    21121 ttgccgtttt caccgctggc cagttatctg caattacagg cgttgccgtt aagctatttc
    21181 ccgtggctgg ttgcgattct ggcagggtat atgacgttaa cccagttggt gaaaggattt
    21241 tatagccgtc gttacggctg gcagtaaaga ataaactggg catggtggcc cggattcaga
    21301 ttgcagacaa agtgagtttt gttcatgccg gatgcggcgt aaacgcctaa tccggcctac
    21361 aaattcaatc aattgcagga atcacgtagg cctgataagc gtagcgcatc aggcgatttt
    21421 gcgtttgtca tcagacttaa tccgggcatg atagcccgga tttccatcaa gattagcgac
    21481 gaatagcgat cgcttcgatc tcaatcttta cgtctttcgg cagacgggca acttcaacgc
    21541 aagaacgtgc cgggaaggtg gcgttgtgtt cggtgaagaa ggtttcgtaa gtggcgttta
    21601 cggttgcgaa gtcgttcaga tcttttacaa acacggtagt tttaacgatg tcgcccactt
    21661 tcagaccagc ggcttcgacg atcgctttta cgttatccag cgactgacgt gcctgtgcag
    21721 cgacgtctgc cggtacttcg cccgttttcg gatttaccgg gatctgaccg gaggtgatga
    21781 tcatatttcc cagatcaacg ccctgtacgt aaggaccgat agctgctggt gcattttccg
    21841 tcgcgatagt tttgctcatg atttctcctt tattacagcg gtaaaaagtc tggctcatta
    21901 tagggagcca gacttttatt accaaccgca attaattggc cagcaccaca ttatgggaaa
    21961 actctttttc acagtatttg catttgagcg cgatgtcatt ggcgcgtttt cgcacggcaa
    22021 agctggatga aaccggttcg gcatggctga tacagttgct gttcgggcag accaacacat
    22081 tgtcgatgcg ctctggcaga ctggggcgcg atttacccac cacttcatag ttgtcgatac
    22141 ggttaaccgt ggcttgcggc gcatacaatg ccagttgatc tacctgatct tcactcaaaa
    22201 aggtattttc gattttgatc agatctttgc ggcccatctc gccagaaggc aggttcagac
    22261 caatggtgat gcgctgatcc gtttcggtca gcttgaacag actcaacagc ttaaaaccga
    22321 tctgggcggg gatatggtca attaccgtgc cgcgtttaat agcttcaacc tgcaatttat
    22381 tatcgtgtgt catctctatt tccccttaca gtaccagatc gcgattcaga accagtgcca
    22441 gtaacgcctg gcgagcgaaa atcccgttgc ctgcctgctg gaagtaccag gcgtgtggcg
    22501 ttttatcaac atccgtcgca atttcatcaa cacgcggcag cggatgcagt actttcatat
    22561 tggctttggc gttgtggaga tcgctggcgc gaagaacaaa ctgcgctttc acgttggcgt
    22621 attcggatgg gtccaggcgc tctttttgca cgcgggtcat atacaggatg tctacttccg
    22681 ccatcacttc ttcaatagag ctgtgcagac tccatgcgat ccctttttca tcgagcatat
    22741 ccagaatgta ttgcggcatt gccagcgcgt ccggcgcgat gaagtaaaaa cggttgccgt
    22801 cgaacttcgc taacgcctga gtcagggagt gaacggtgcg gccatatttc aggtcaccaa
    22861 ccattgcgac gtggagattg tccagacgcc cctgggtttc ctgaatagtg aataagtcca
    22921 gcaaggtttg cgtcggatgt tggttggagc catcaccggc attcagtacc ggtacattgc
    22981 cggaaaactc ggtggccagg cgcgccgcac cttcctgcgg atgacgcatc actatcgcat
    23041 cgacgtaagt gctgataacc gaaatggtat cggccagcgt ttcgcccttt ttacccagtg
    23101 atgtattggc gctgtcggag aagcccacca cgctggcacc caggcggtgc atggaagttt
    23161 cgaaagagag gcgggtacgg gtagaggctt cgaagaagca gctggcaatg actttgtgct
    23221 tcaacagctc tggttgcggg tttgctttca gttttgccgc tgttgccagc accagattaa
    23281 ggtcatcgcg actaaggtcg tttatggaaa tgatatgttt ctgatatagc ggattagcca
    23341 tcttttatct cctgacgcct gggcaaaaaa aagcccctcg attgaggggc tgggaatggg
    23401 tgatcaacgg gaagaaaaac ggcaggccag cgtctttttt cagacgcggt aagacaaaat
    23461 gtcgaacaca ctgaaccata catcctcccg gcaaattgtc cggcattata ctcatcgtca
    23521 gaagcggtgc aagcaattga tgcaatattt tgtcagcgca aacggtttat ttgaatttaa
    23581 agttaaaata tatgcatttt tatttactgt gattctgggg ggaactgtcg ttcggtatca
    23641 ataattgcag acatttcctg cttttttctt tttcactttc acgcaatcag atatgcattt
    23701 tattccattc atccgactta tagggcggag tgtgaaaacg aacggctagc actattgctt
    23761 agagctcagg gatgcgcgct atcactttaa tttcaaaatc aaagcctgcc agccatgtaa
    23821 cgcccaccgc cgtccaggtt ggataagatg gcgcgctaaa tatttcattt ttcaccgtca
    23881 tgatgtcttc aaattgtttt tctggatcgg tatgaaagct cgtaacatca atgatatcgt
    23941 caaaagtgca tcccgcagct gccagggtcg catgcaaatt atcaaaggcc agtctgactt
    24001 gttgctgaaa atcgggttct ggtgttccgt cctctcgact tcctacttgc ccggaaacaa
    24061 acagcaaatc gccggaacga atagccgcag aataacgatg ctcagcatac agtgaatgtc
    24121 gtccagcagg gaaaacagcg gttctttcta ccatttggtt atcctcaaga tttacgacat
    24181 gaacagaaga tttatattta ccaggagccg cttttagcgg acgacgtgag taaacaaaac
    24241 ccagacatca tgggaaatgg ctgggcttaa ttgagcgtag tcggttatgc gccaaacgcg
    24301 ccatcaatgg tatgcatcgc gccggtaaca aaactggctt ctggccctgc taaccatgcg
    24361 accataccag cgacctcttc cggttgccca tgtcttttga tggccataaa actatgcgac
    24421 atatcgcgca ttggcccgtt ggcgggatta gcgtcggtat caattggccc tggctggacg
    24481 acgttgatgg tgatcccacg cggtccgaaa tcacgggcca gcccgcgcgc catgccttgc
    24541 agggcagatt tactggcggc ataagcagcc atgcctgcaa caggcatacg atcgccattc
    24601 acggagccga tgattaagat gcgtccgcct tcgggcatct gccgggcggc ttcaacagag
    24661 gcatggtaag gagcatgaat attgattttg aaaaggcgat caatatcgtc ggcatttaat
    24721 tccagggcat cgccaaagac gccaatacct gcatttacca ccaggatatc caatgcgccg
    24781 ctcttacgaa cgacatcaat aacagcgtct ttgtcagcac tatctgtgaa tactgctgtc
    24841 gctccagtct cttgtgccag gcgttcagcg gcatctttcg accccgcata ggtgaatcgt
    24901 acattggccc catcggtgac gaaacgacgt acgatagcgg caccgattcc acggctacca
    24961 ccgaggatga gaactgtctt acctgtaaaa gcgcccataa ggactccttg atttattatg
    25021 taacatgcat tacaaaactg ttttaacttt ctgtcaacaa gttttgtaat ggtcactaaa
    25081 aaacaatctc gcgttccagg tcgtcccaga cgtttcgctc ctgagcaggc agtctctgcg
    25141 gcaaaagtgc tttttcacca aaaaggtttc gatgctgtca gtgttgctga agttactgat
    25201 tatcttggta ttaacccccc gagcctctac gcggcttttg gcaataaggc tgggttattt
    25261 agccgtgtac tcaatgaata tgtcggtacg gaagctattc cgcttgccga tattcttcgt
    25321 gatgatcgtc cggtagggga gtgcctggct gaggtattaa aagaagcggc gcgccgatat
    25381 agccaaaacg gcggctgcgc tggctgtatg gttcttgaag gcattcatag tcatgatcca
    25441 caagcgcgtg atattgccgt tcaatattat cacgccgcag aaacgaccat ttatgactat
    25501 atcgccaggc ggcatccaca aagcgcacaa tgtgtgactg attttatgag taccgtgatg
    25561 tcagggcttt ctgcgaaggc acgggagggg cactccatcg aacaactctg tgcaacagct
    25621 gcactggcgg gggaagcgat aaaaactatt ctcaaggagt gatgcgggcc ttgacccgaa
    25681 aggcgggaac gcgcctgccg ataagttgtg ataagacaat aattcacgcg ttaaggctag
    25741 cggaattgat catcttttcg tataacgatg gaaatgaaac gttgttttaa ttaaggagtg
    25801 gaaaagatga tcatcggaaa tattcataat cttcagccgt ggctacccca ggagttacgc
    25861 caggcgattg agcatatcaa agcacacgtt acggcagaaa cgccaaaggg caagcacgat
    25921 atcgaaggca atcgtctgtt ttatcttatc tcggaagata tgaccgagcc gcacgaagct
    25981 cgccgtgcgg agtaccatgc ccgctatctc gacattcaga ttgtgttaaa aggtcaggaa
    26041 ggcatgacct tcagcacgca acctgcaggc accccggata ccgactggtt agctgataaa
    26101 gacatcgcat ttttgccgga aggcgttgat gagaaaacag ttatccttaa tgaaggtgat
    26161 tttgttgtgt tttatccggg ggaagtgcat aaaccgctgt gcgcagtggg cgcgccagcc
    26221 cgggttcgca aagcagtagt gaagatgctg atggcgtgat gacttttcgc cgtaaataac
    26281 tccaggttta cggcgagttt gtgaaaagag cgttttttga tatttttttg tgagtaaaat
    26341 ttgtaatgct tagacgttct tattaactca aggagttcgt catgagcaaa atatcagatt
    26401 tgaattattc tcaacacatt acattagccg acaattttaa acaaaaaagt gaagttttaa
    26461 atacctggcg tgttggaatg aataattttg cccgtaatgc cgaggggcag gataacacaa
    26521 gaaatatcct tgatcctaag acatttttgg aatttttggt aaaaatattt actctaggtt
    26581 atgtggattt tagcaaacgc tccaacgaag cgggaagaaa tatgatggct catattgagt
    26641 cctcatctta tatcaaaaat aatgatggca gtgagataat aaagtttgtt atgaataatc
    26701 ctgaagggga acgagcggat ttatctaagg tggaaataga aatcacactt tccactttca
    26761 ctactatggg gactcgtcaa ggacatacgg ctattatatt tcaacaacct gatggttcga
    26821 ctaatcgtta tgaaggaaag tcctttgaaa gaaaagatga gagttcatta cacctgatta
    26881 ctaacaagat tctggcatgt taccaacgcg aagctaacaa ggaaatagct cgtctattaa
    26941 atatttcaca ggagttaaat aattctcagg acttgaataa ctcgcaggtg agttgtaaag
    27001 attcagttga ttctacgatt acggatttat tagaaaaacc attgaataat gcattattag
    27061 caataaggaa agaacatctg ctattaatgc cttatgtatg taatgaatcg atttcatact
    27121 tgcttggtga aaaagggata ctgaaagaaa tagatgacct taacgcagta aataattatc
    27181 ttcttaataa taagaaagct actgacaatg aaattaatga catcaaagtt aacctgtctc
    27241 atattcttat tgattcctta gatgatgcaa aagttaacct tacaccggtc atcgattctg
    27301 gagacttttt taaaatcccc atatattaat gatgtaagaa tactggattg gtgttttaat
    27361 aaaagaatgc aatattttgg tgattctgaa aagataaagt atgcatgctc cgtgataaat
    27421 catattgatt ttagccgcga tcaatctaaa gattttagct gcgatcaatc taaaattaaa
    27481 atagctgaga ccttattttt caatctcgat aaagaaccct ataaaaa
//
LOCUS       DADMIB010000041        27205 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.041, whole genome shotgun sequence.
ACCESSION   DADMIB010000041 DADMIB010000000
VERSION     DADMIB010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27205)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27205)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27205
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.041"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(37..1335)
                     /gene="eno"
                     /locus_tag="JNZ89_001653"
     CDS             complement(37..1335)
                     /gene="eno"
                     /locus_tag="JNZ89_001653"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HAY8935565.1"
                     /translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
                     SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
                     KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
                     DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
                     NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
                     LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
                     IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
                     KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
     gene            complement(1423..3060)
                     /gene="pyrG"
                     /locus_tag="JNZ89_001654"
     CDS             complement(1423..3060)
                     /gene="pyrG"
                     /locus_tag="JNZ89_001654"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HAY8935566.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
                     INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
                     ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
                     AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
                     NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
                     EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
                     TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
                     VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
                     DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
                     FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
     gene            complement(3288..4079)
                     /gene="mazG"
                     /locus_tag="JNZ89_001655"
     CDS             complement(3288..4079)
                     /gene="mazG"
                     /locus_tag="JNZ89_001655"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HAY8935567.1"
                     /translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
                     DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD
                     SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
                     TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
                     ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
     gene            complement(4150..4485)
                     /gene="mazF"
                     /locus_tag="JNZ89_001656"
     CDS             complement(4150..4485)
                     /gene="mazF"
                     /locus_tag="JNZ89_001656"
                     /EC_number="3.1.27.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease MazF"
                     /protein_id="HAY8935568.1"
                     /translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG
                     MCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKRIAWRARGATKKGTVAPEELQLI
                     KAKINVLIG"
     gene            complement(4485..4733)
                     /gene="mazE"
                     /locus_tag="JNZ89_001657"
     CDS             complement(4485..4733)
                     /gene="mazE"
                     /locus_tag="JNZ89_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HAY8935569.1"
                     /translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII
                     EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW"
     gene            complement(4811..7045)
                     /locus_tag="JNZ89_001658"
     CDS             complement(4811..7045)
                     /locus_tag="JNZ89_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HAY8935570.1"
                     /translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQ
                     QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
                     VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
                     REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
                     HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
                     RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
                     EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
                     MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
                     FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
                     RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
                     PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
                     ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
                     ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
                     LHGS"
     gene            complement(7093..8394)
                     /gene="rlmD"
                     /locus_tag="JNZ89_001659"
     CDS             complement(7093..8394)
                     /gene="rlmD"
                     /locus_tag="JNZ89_001659"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HAY8935571.1"
                     /translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGL
                     LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
                     SKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK
                     QCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREK
                     LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
                     SALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ
                     NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
                     TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
     gene            8451..11207
                     /gene="barA"
                     /locus_tag="JNZ89_001660"
     CDS             8451..11207
                     /gene="barA"
                     /locus_tag="JNZ89_001660"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase BarA"
                     /protein_id="HAY8935572.1"
                     /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
                     GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
                     LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
                     ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
                     GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
                     VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
                     ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
                     NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
                     DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
                     GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
                     PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
                     KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
                     IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ
                     QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
                     VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGL
                     VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS
                     KILG"
     gene            complement(11439..12779)
                     /gene="gudD"
                     /locus_tag="JNZ89_001661"
     CDS             complement(11439..12779)
                     /gene="gudD"
                     /locus_tag="JNZ89_001661"
                     /EC_number="4.2.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HAY8935573.1"
                     /translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIMIIK
                     DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQ
                     TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKAT
                     PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
                     SIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA
                     EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
                     TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
                     PEKPGLGVEIDMDQVMKAHELYQKHGLCARDNAMGMQYLIPGWTFDNKRPCMVR"
     gene            complement(12800..14140)
                     /locus_tag="JNZ89_001662"
     CDS             complement(12800..14140)
                     /locus_tag="JNZ89_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HAY8935574.1"
                     /translation="MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
                     NAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
                     WTFELHVNAVAALEAALLDLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTD
                     LPYLENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
                     VRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAE
                     FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
                     WGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVP
                     DAPGLGVELDWEQVQKAHEAYKRLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH"
     gene            complement(14142..15512)
                     /locus_tag="JNZ89_001663"
     CDS             complement(14142..15512)
                     /locus_tag="JNZ89_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8935575.1"
                     /translation="MFRSATTSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRAT
                     LSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWS
                     MFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSI
                     FNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQ
                     KELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYF
                     FITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKT
                     PIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSG
                     GLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIEL
                     KPVAGQ"
     gene            complement(15929..16378)
                     /locus_tag="JNZ89_001664"
     CDS             complement(15929..16378)
                     /locus_tag="JNZ89_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HAY8935576.1"
                     /translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
                     LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
                     GGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS"
     gene            complement(16396..17178)
                     /gene="truC"
                     /locus_tag="JNZ89_001665"
     CDS             complement(16396..17178)
                     /gene="truC"
                     /locus_tag="JNZ89_001665"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HAY8935577.1"
                     /translation="MLEILYQDEWLVSVNKPSGWLVHRSWLDRDEKVVVMQTVRNQIG
                     QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
                     PLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR
                     KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
                     IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
     gene            complement(17178..17507)
                     /locus_tag="JNZ89_001666"
     CDS             complement(17178..17507)
                     /locus_tag="JNZ89_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HAY8935578.1"
                     /translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
                     MEPLEWLQWVLIPRMHDLLNNNQPLPGAFAVAPYYEMALATDHPQHALILAELEKLDA
                     LFADDAS"
     gene            complement(18129..18674)
                     /gene="syd"
                     /locus_tag="JNZ89_001667"
     CDS             complement(18129..18674)
                     /gene="syd"
                     /locus_tag="JNZ89_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SecY-interacting protein"
                     /protein_id="HAY8935579.1"
                     /translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST
                     TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ
                     TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
                     RKRTHLASNLAEFLNQLKPLL"
     gene            18742..19590
                     /gene="queF"
                     /locus_tag="JNZ89_001668"
     CDS             18742..19590
                     /gene="queF"
                     /locus_tag="JNZ89_001668"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HAY8935580.1"
                     /translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL
                     KADNLPFHGTDIWTLYELSWLNAKGLPKVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
                     TRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
                     EFTTDYLENATCGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
                     LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
                     TRLVRQ"
     gene            19702..21066
                     /gene="ppnN"
                     /locus_tag="JNZ89_001669"
     CDS             19702..21066
                     /gene="ppnN"
                     /locus_tag="JNZ89_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase"
                     /protein_id="HAY8935581.1"
                     /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
                     GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
                     DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
                     ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
                     IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
                     NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP
                     LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF
                     SGIVAGNVKAVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
                     EICT"
     gene            21623..22912
                     /locus_tag="JNZ89_001670"
     CDS             21623..22912
                     /locus_tag="JNZ89_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HAY8935582.1"
                     /translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
                     AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
                     LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
                     IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
                     VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA
                     DLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
                     SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
                     AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
     gene            22970..24337
                     /gene="sdaB"
                     /locus_tag="JNZ89_001671"
     CDS             22970..24337
                     /gene="sdaB"
                     /locus_tag="JNZ89_001671"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase II"
                     /protein_id="HAY8935583.1"
                     /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
                     VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
                     HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ
                     DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
                     GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
                     IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
                     IVACD"
     gene            24359..25204
                     /gene="xni"
                     /locus_tag="JNZ89_001672"
     CDS             24359..25204
                     /gene="xni"
                     /locus_tag="JNZ89_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311685.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease Xni"
                     /protein_id="HAY8935584.1"
                     /translation="MRGLFPISHPAVACSGIECYPYRLIFKGVIVAVHLLIVDALNLI
                     RRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPP
                     MPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGY
                     CQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPK
                     SATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQ
                     LRLVR"
     gene            complement(25309..26446)
                     /gene="fucO"
                     /locus_tag="JNZ89_001673"
                     /pseudo
     CDS             complement(25309..26446)
                     /gene="fucO"
                     /locus_tag="JNZ89_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417279.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
     gene            complement(26474..27121)
                     /gene="fucA"
                     /locus_tag="JNZ89_001674"
     CDS             complement(26474..27121)
                     /gene="fucA"
                     /locus_tag="JNZ89_001674"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HAY8935585.1"
                     /translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG
                     IPYEKLTESHIAFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS
                     ILNRPIPAIHYMIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIAC
                     EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
BASE COUNT         6578 a         7295 c         6556 g         6776 t
ORIGIN      
        1 cggaggctgg catttttaaa tcagataaag tcagtcttat gcctggcctt tgatctcttt
       61 acgaccgttg tacggtgctt tttcgcccag agcttcttcg atacgaatca gctggttgta
      121 tttagcaaca cggtcagaac ggctcataga accagttttg atctggcctg cagcagtacc
      181 aacagccagg tcagcgatgg tagcgtcttc agtttcgcca gaacggtgag agataactgc
      241 agtgtagcca gcatctttcg ccatcttgat tgcagccaga gtttcggtca gagaaccgat
      301 ctggttgaat ttgatcagga tggagttagc gatacctttt tcgatacctt ctttcaggat
      361 cttggtgttg gttacgaaca ggtcgtcacc aaccagctgg attttgtcgc ccagaacttt
      421 ggtctggtat gcgaaaccgt cccagtcaga ttcgtccaga ccgtcttcga tagaaacgat
      481 cgggtactgt ttggtcagtt cttccaggaa gtgagtgaat tcttcagagg tgaacgcttt
      541 gttgccttcg ccagccagaa cgtatttacc atctttgtag aattcagaag ctgcgcagtc
      601 catcgccaga gtgatgtctt tgcccagttc ataaccagca gctttaacag cttcagcgat
      661 aacagccaga gcttcagcgt tggaacccag gttcggcgca tagccacctt cgtcaccaac
      721 agcagtgttc atgcctttcg ctttcagaac ttttgccagg tgatggaaaa cttcagaacc
      781 catgcggatg gcttctttca cagttttcgc gccaaccggc tgaatcatga attcctggat
      841 atcaacgttg ttgtcagcgt gctcaccacc gttgatgatg ttcatcatcg gaaccggcat
      901 agagtatttg cccggagtac cgttcagttc agcgatgtgc tcgtacagcg gcataccttt
      961 agcagctgca gcagctttgg cgttagccag agatacagcc aggattgcgt tcgcgccgaa
     1021 tttggatttg ttttcggtgc cgtccaggtc gatcatgatc ttgtcaatgc cagcctgatc
     1081 tttagcatct ttgccaatca gcgcctgagc gatcgggccg tttaccgcag caacagcttt
     1141 ggttacgcct ttacccagga aacgggattt gtcgccatcg cgcagttcca gagcttcacg
     1201 ggaaccagta gaagcacctg acggagcagc tgccataccg acgaaaccac cctccagatg
     1261 tacttcggct tcaacagtcg ggttaccacg ggagtcgatg atttcacgac cgatgatttt
     1321 tacgattttg gacattaggt tttcctcaag tcactagtta aactgaaact ccagacaaac
     1381 aacacgtacc cagggtacgc gttgccgttc taactttttt acttacttcg cctgacgttt
     1441 ctggaactcg ctggcggctt tcacaaagcc tgcaaacagc gggtgaccat cacgtggagt
     1501 agaagtaaac tccggatgga actggcaagc cacgaaccac gggtgattcg gaacttcgat
     1561 gatctcgacc aactgatcat ccccggaacg gcccgcaacg cgcagacctg catcttcaat
     1621 ctgtttcaac agcatgttgt tgacttcgta acggtgacga tgacgctcaa caattgtcgg
     1681 cgcattgtac agctggcgaa ccaggctatc gtcaaccaac tggcactgct gtgcgccgag
     1741 acgcatggta ccgccgagat cgctcttctc gctacgaact tcaacgttgc cgttttcatc
     1801 gcgccactcg gtaatcagcg ccacaaccgg gtacttacag tctggcacaa attccgtaga
     1861 gttggcgttc tccatgttgg caacatggcg agcgtaatca attaacgcca cctgcatacc
     1921 caggcaaatg cccagataag gaatattgtt ctcacgcgca aaacgcgcgg tcgtaatcat
     1981 gccttctacg ccacgatagc cgaaaccgcc aggtacgagg attgcgtcca gacctttaag
     2041 gatttcaacg ccgcgcgttt caacatcttg tgaatcgatc agtttgatgt tgacgctgac
     2101 acgattcttc agcccaccgt gtttcagtgc ttcgatcact gatttataag catccggcag
     2161 ttcaatgtac ttgccgacca taccgatggt gacttcactt accgggttcg cttcttcgaa
     2221 gataacctgt tcccattcgg acagattcgc ttccgggcag tttaagctga atcgtttaca
     2281 aatataatcg tccagcccct gagatttcaa caggcccgga attttataga tggaatcgac
     2341 gtctttcaga gaaataaccg ctttttccgg aacattacag aacaatgcaa tcttcgcacg
     2401 ttcgttcgcc ggaacagcgc gatctgaacg acaaatcagg atgtcaggct ggataccgat
     2461 ggagagcagc tcttttacag agtgctgagt cggtttggtt ttgacttcac cagacgctgc
     2521 catgtacggc accagcgtca ggtgcataaa cagagtgtgc tcacggccaa tttcaacagc
     2581 catctggcga atcgcttcga ggaacggcaa ggattcgata tcacctactg taccgccgat
     2641 ttctaccagt actacgtcat gaccttcgcc accttccagc acgcgctctt tgattgcgtt
     2701 agtgatgtgc ggaataacct gcacggttgc gccgaggtag tcaccgcggc gttctttacg
     2761 cagaacgtca gagtagatac gacccgtggt gaagttgttg cggcggctca ttttggtacg
     2821 aatgaaacgc tcgtagtgcc ccaggtccag gtcggtttca gcgccgtctt cagtaacgaa
     2881 cacttccccg tgttggattg ggctcatagt acctggatcg acgttgatgt acggatccag
     2941 tttcatgatg gtcacattga ggccacgggc ttcaagaatg gctgcgaggg aggctgcggc
     3001 aatgccttta cccagagagg atacgacccc gccggtcaca aaaatatagt tcgttgtcat
     3061 gctgaacctg agaagttagg ttgaaaagac gatggaataa ccaggacggg aaagcagtat
     3121 acccgaacat gacctgtgcc acaaactttc attatccctc ctcttcgcca gcgcactatt
     3181 gaaatcagga gtgagaaaat agcccctttg gggtaaatgt ttttgacgca aatcaagcgc
     3241 ttgtcattta aaaaatgaca caaatggcac ttgaccgcgt aattccctta gagatcaatt
     3301 tcctgccgtt ttacctgttg ccagacttct tccattgttt cgaggtcaac acctgtcatt
     3361 tccagtccac gcgcggcaac aatacgctcc acttcgcgaa aacgacgctc gaatttttcg
     3421 ttcgcttttt gcaatgcgat ttctgctttc gtccctaaat ggcgagccag attaaccgtg
     3481 gcaaacagca ggtcccccat ttcctcctcc agtttagcct ggtcgacaac agcctgccgc
     3541 gcttcgtaca tcacctcgtc gatctcttcg tagactttat caaccaccgg gccaagcgtc
     3601 gtccagtcga agccaacgtt ggcgcaacgt ttctggattt tttgcgcccg cattaaagcc
     3661 ggtaaactac gaggaatatc gtccagcgcc gaatgctgcg ctttctgcgc gcgctcttcg
     3721 gttttgattt gctcccaacg ggcaagcact tcactactgt tttcggcaga actatcagca
     3781 aaaacatgcg gatggcgacg ctctaattta tcgctaatag cagcgcaaat atcattaaag
     3841 tcaaagcgcc cttcttcctg agccatttgc gcgtaaaaca ccacctggaa tagcagatcg
     3901 cccagttcac cgcgaagatc gtcaaaatct tcacgggcga tggcgtccag cacttcgtag
     3961 gtttcttcaa gggtgtaagg cgcaatggtg gcaaatgtct gctctttatc ccacgggcag
     4021 ccgttttccg gatcgcgcag gcgctgcata atagtgagca aacgatcgat ttgattcatt
     4081 gaattgtcct gaaaattgcg ggtctgtcag gtggaaacct gtgaccagaa tagaagtgag
     4141 ttagtaacac tacccaatca gtacgttaat tttggcttta atgagttgta attcctctgg
     4201 ggcaactgtt cctttcttcg ttgctcctct tgcccgccag gcgattcttt ttacctgatc
     4261 agctaacgct acgccatcac gttcctgacc ggataaaaca acttcgaacg gatatccttt
     4321 tgattgcgtt gtacaaggaa cacacagaca catacctgtt ttgttgttgt acatgaaagg
     4381 actcaggaca acagctggac gatgtccagc ttgctcgcta ccttttgtcg ggtcaaaatc
     4441 aacccaaatc agatcgccca tatcgggtac gtatcggctt accattacca gacttcctta
     4501 tctttcggct ctccccagtc gatattctcg tggaggtttt ccggcgtgat gtcgttgacc
     4561 agttcagcaa gcgtaaatac gggctcttta cgcactggct caataattaa tttgccatcc
     4621 accaggtcaa tcttcacttc atcatcaata ttcagattga gcgcctgcat taacgtagcc
     4681 gggatccgca ccgccggtga atttccccaa cgctttacgc tactgtggat catcaccctt
     4741 tcctcaaacc gctatcatat gtagatacag tatatatcaa tctacattgt agatacgagc
     4801 aaatttctgc ctaactcccg tgcaaccgac gcgcgtcgat aacatccggc acctggttga
     4861 gtttacccag cacgcggccc agcacctgca ggttgtaaat ctcaatggtc atgtcgatgg
     4921 tcgccagttg ctgtttggtg tcgctacggc tggcaacgcc aagtacgttc accttctcgt
     4981 tggcgagaat ggtcgtgata tcacgtaaca acccactacg atcattagcc accacgcgga
     5041 ccaccagcga atatccggcg gagtagctct caccccatac cgcgtcaaca atgcgttctg
     5101 gcgcatgaga gcgcagttcc gccagttgtt cgcaatcggc gcggtgtact gaaataccgc
     5161 gcccctgggt aatgaagccg acaatctcat ctccaggaat cggctggcag cagcgcgcga
     5221 tgtggtgcat caggttgcca acaccttcga ctaccacgcg accgttatct ttactgcggt
     5281 tttgcggcgt gtagcttttt tgctgaagtt gcttcagcgc ggcggcgtcc tgctcttcgg
     5341 cactcggctt attaaattgc gattgcagga agttcaccat ctgattgaga cggatatccc
     5401 cgccaccaat cgccgccagc aactcgtcga catcattaaa gttgtaacgc ggcagcagat
     5461 gtttttctgc ttctttcagg ctgatcccca gatgttccag ctcgtcgtca aggatttgcc
     5521 gcccagccag aatgtttttg tcacggtcct gtttacggaa ccaggcgtga attttcgaac
     5581 gcccacggct ggttgtgacg taaccgaggt ttgggtttaa ccagtcacgg ctggggttcg
     5641 gctgtttctg ggtgataatt tcaatctggt cgcccatctg cagctggtag gtgaacggca
     5701 caatgcgccc gccaattttt gccccgatgc agcggtgtcc gacatcactg tggatgtggt
     5761 aagcgaagtc cagcggcgtt gatcccgcag gcaaatcaac gacatcacct ttcggcgtaa
     5821 agacatacac ccggtcgtca aagacctggc tgcgtacttc gtcgagcatt tcgccggaat
     5881 cagccatctc ttcctgccac gcaatcagtt tacgcagcca ggcaatccgg tcttcatgtc
     5941 ccgaacgtgc gccgccagct gccgcgccct ctttatattt ccagtgcgca gcaacaccca
     6001 actctgcatc ttcatgcatc tgtttggtgc ggatttggat ctcaacggtt ttgccacctg
     6061 gccccagaac cacggtatga atagactgat aaccgtttgg tttcgggtta gcgacataat
     6121 cgtcaaactc atccggcagg tggcgatagt gagtgtgcac tatccccagt gcggcataac
     6181 aatcctgtaa acgctcggcg acaatacgta ccgcacgcac atcaaacagc tcatcgaagg
     6241 cgaggttctt tttctgcatt ttgcgccaga tgctgtagat gtgtttcgga cggccataca
     6301 cttcagcttt aacgccttca gctttcatct cagcgcgcag atgaccgaca aactcttcga
     6361 tatagtgttc gcggtcgaga cggcgttcat gcagcagttt tgcgatgcgt ttgtattcgg
     6421 tcgggtgcag ataacggaag cagtaatctt ccagctccca tttcagttgc ccaatcccaa
     6481 gacggttcgc caacggcgcg tagatattgg tgcactcttt tgccgccagt acgcgttcat
     6541 cttccggcgc atcttttact tcgcgcagat gagcaatacg ctccgccagt ttgatgacca
     6601 cgcagcgaaa atcatcgacc atcgccaata acatccggcg aacgttatcg acctgttcgg
     6661 aggaaacaga atcagtgtgc gtcgctttca gctggcggat cgccgccata tcacgcacgc
     6721 cgtgaataag gttaacgaca gacttaccga cgctctcacg cagcacatct tcgctgacta
     6781 cgttggcatc ggccagaggg aacagcagcg ccgcccgcag cgtgtcaatg tccatactta
     6841 atgtcgagag gatctccacc atctcaacac cacgccacaa taacagactg gcatccggat
     6901 gcccctgcgt ctgctgcaga caatacgccc aggtttcggc taagcactca cacgacttct
     6961 ggctggtaat acccagactt gcgatccatt tttccggatc aaattcacca gccttattga
     7021 tatgtgcact tcttaccgca accattgtcc tctcctttag ggaccagacc tgccgaaatc
     7081 ggcaaatcgt aactatttaa cgcgcgagaa aagtaccatc gattccagat gtcccgtgtg
     7141 tgggaacata tccagcatcg ccagtcgcgc aatggtatat cctgctttta ataacgcttc
     7201 gctatcccga gccagcgttg cagggttaca ggatacataa actatacgaa taggttccag
     7261 ttttataatt tgctgcataa cacctgcggc acctgctcgc gccgggtcca gcaacacttt
     7321 atcgaagccg tttttcgccc acggctgctt tgtgacatct tcttcaagat tttcgtgata
     7381 aaacgtcaca ttctgtaagc cattaagacg cgcattctgc tggccttttt ccaccagcgc
     7441 cggaacacct tctacaccga ccacactggc agcttgtgtc gccaatggca gtgtaaagtt
     7501 gcccataccg cagaacagat ccagtacgcg atcttcaggt tgcacatcca gccattccaa
     7561 cgcactcgct accatttttt ggttcacacc cgcattgacc tgaataaaat cgcgcgggct
     7621 aaaagttaag cgcaacccgt tagagtcata ccagggcatc tcaccagaga cggtttcgag
     7681 tatctcacta tcgggggcga gatacagatc caggccttca gaatgcgaaa agcgttccag
     7741 tttttcgcga tctgccgaac ttagcggtgc ggtatggcgc aaaatcatca gcgtgccgct
     7801 ggttgcctgt accagttcaa catgaccaag atggcgcatt gcttgtaagc tgcccaggca
     7861 tgccctgact ttgggcagca atgcttcaag ttggggcact aaaatgggac attgtttaac
     7921 gtcgacaatg tcactggagc ccgctttgcg aaaccccatc tgaagttgct gtgttttcgg
     7981 taagtagttc agacttaaac gcgcgcgacg gcgatagccc cagggaacat cggcgatcac
     8041 ttcagagact tcgtgtttca ttaatcgggc gagtgccgca cttttgcttc gctgctgtaa
     8101 atccacgctg gcgtgttgtt gctgacagcc gccgcatacg ccaaaatgag gacagcgtgg
     8161 cgtttcgcgt tccgggctat cgcttaaccg gcgtacgact ttagcgcggg catactgttt
     8221 tttatcttca gtaacagtaa cttccgcgtt ttcctgcggc aataatccgg ggataaatag
     8281 cgttttgccg ttatgtcgcg ccacgccctg accaaaagag tcgaggtcgt tgactgaaac
     8341 ggttatgatc tgacgcgtcg tcgtgcgtcg ttttgcagag tagaattgcg ccattggcga
     8401 gactttctca atttaacagt gtgaccttaa ttgtcccata acggaactcc atgaccaact
     8461 acagcctgcg cgcacgcatg atgattctga tcctggcacc gaccgtcctt attggtttat
     8521 tgctgagtat atttttcgtc gtgcatcgct ataacgactt gcagcgtcaa ctggaagatg
     8581 caggtgccag cattattgag ccgcttgcag tttctactga atatggcatg agcctgcaaa
     8641 atcgcgaatc tatcggtcag ttaataagcg tactgcatcg tcgccattcc gatattgttc
     8701 gcgcgatttc ggtttatgat gaaaataacc gactctttgt cacctccaat tttcatcttg
     8761 atccctcatc aatgcagctc ggcagcaacg tgccgtttcc tcgccagctc actgtcactc
     8821 gtgacggcga tattatgatc ctccgcacgc cgattatttc tgagagttac tcccccgacg
     8881 aatcgcccag tagcgatgcc aaaaatagtc aaaatatgtt gggatatatt gcgcttgagc
     8941 tggatcttaa atcggttcgc ttgcagcaat ataaagagat ctttatttcc agcgtgatga
     9001 tgctgttttg tatcggtatt gcgcttattt ttggctggcg cttaatgcgc gatgtaaccg
     9061 gtccgattcg caacatggtg aataccgtcg accgcatccg tcgcgggcaa ctcgacagcc
     9121 gggtggaagg atttatgctc ggcgagctgg atatgctgaa aaacggtatc aactcgatgg
     9181 caatgtcgct ggctgcttat cacgaagaga tgcagcacaa tatcgaccag gcgacgtccg
     9241 atctgcgtga aacgctggag cagatggaaa ttcagaacgt tgagttggat ctggcgaaaa
     9301 agcgcgccca ggaagcggcg cgtattaaat ccgagtttct ggcaaatatg tcacacgagc
     9361 tgcgtacacc actgaatggt gttattggct ttacccgcct gacgctgaaa acagaattaa
     9421 caccaacgca gcgcgatcac ctgaatacga ttgaacgttc ggcaaataat ttgctggcaa
     9481 ttattaatga tgttctcgac ttctcgaaac tggaagcagg taagctgatt ctggaaagta
     9541 ttccattccc actacgcagc acgctggatg aagtcgttac tctgctggca cattcttctc
     9601 acgataaagg gttggaactg acgctcaata ttaaaagcga cgtgcctgat aacgtgatcg
     9661 gcgacccact gcgattacag caaatcatca ctaacctggt ggggaatgca attaaattca
     9721 ccgagaatgg caacattgat attctggtag aaaaacgtgc gctgagtaat accaaagtgc
     9781 agattgaagt gcagattcgg gataccggca ttggtattcc tgaacgcgat caatcgcgct
     9841 tattccaggc cttccgacag gctgatgcca gtatttcccg ccgtcatggt ggcaccgggc
     9901 tggggctggt gattacacaa aaactggtta atgaaatggg cggcgatatt tcgttccata
     9961 gccagccgaa tcgcggttca actttctggt tccacattaa tctcgatctg aacccgaaca
    10021 ttattatcga agggccatcc acccagtgcc tcgcaggtaa gcgcctggcc tatgtcgaac
    10081 caaactccgc agcagcgcaa tgcacgctgg atattttaag tgaaacgccg ctggaagtgg
    10141 tttatagccc aacgttctcc gcgctgcctc ccgcgcatta cgacatgatg ttgttaggca
    10201 tcgcggtgac cttccgcgag ccgctaacaa tgcaacatga gcgattagcg aaagcggtat
    10261 cgatgaccga tttcctgatg ctggcacttc cttgccatgc acaagtcaat gctgaaaaac
    10321 tcaagcaaga tggtatcggc gcgtgtctgc tgaaaccatt aacacctaca cgcctgttgc
    10381 ctgccctgac ggaattttgt catcacaaac aaaacacgct tttgcctgta accgatgaaa
    10441 gtaagctggc aatgacagtc atggcggttg atgacaaccc cgctaacctg aaacttatcg
    10501 gcgcattgct ggaagatatg gtgcaacatg tggaactttg cgatagcggg catcaggcgg
    10561 ttgaacgggc gaaacagatg ccgttcgatt tgatcttaat ggatattcaa atgccggaca
    10621 tggatggcat tcgggcctgc gaactcatcc accagctccc ccatcagcaa caaacgccgg
    10681 ttatcgcggt aacggcgcat gcaatggccg ggcaaaaaga gaagctgctt ggcgcaggga
    10741 tgagcgatta tctggcgaaa ccgattgaag aagagcgatt gcataatttg ttgttgcgct
    10801 acaagcctgg cagcggtatt tcctctcgcg tcgtgacgcc cgaagtcaac gaaattgtgg
    10861 tgaacccgaa tgcgaccctc gactggcaac tggcactacg ccaggcagca ggaaaaaccg
    10921 atttagcgcg cgatatgctg caaatgttac tcgatttcct gcctgaagtt cgcaacaaag
    10981 ttgaggaaca gctggttgga gaaaacccgg aaggcctggt tgatttgatt cataaactgc
    11041 atggcagttg cggctatagc ggtgtgccgc gtatgaagaa tctctgccaa ctgatcgaac
    11101 aacagctacg tagcggtact aaagaagaag atttggagcc ggagctgctg gaactgttgg
    11161 acgagatgga taatgtcgcg cgcgaagcca gcaaaattct cgggtaacgg acgtcttgtc
    11221 gagtagcaat cggcttttta tgacgctggt ttcagattgg tgacaaagtg cctgtgttta
    11281 tgccggatgc ggcgttaacg ccttatccgg cctacaaaac caattaaatt caatgaatta
    11341 aaaaatgatg tagacctgat acatagcaca acaggctatt ttgcgtttag catcagtctc
    11401 aagccggctc cagatagagc cggttttggt tttctgtctt aacgcaccat gcacgggcgc
    11461 ttgttatcga acgtccagcc aggaatcaga tactgcattc ccatcgcatt gtcacgcgcg
    11521 caaagcccgt gtttctgata cagctcatgg gctttcatca cttgatccat atcgatttct
    11581 acacccagcc ccggtttttc cggcacctga accagaccgc ctttgatctc aaacggttct
    11641 ttggtcaagc gctgattgcc ttcctgccaa atccagtgcg tatcaatcgc ggtgatttta
    11701 cccggtgcag cggcggcaac atgggtaaac atcgccaggg aaatatcgaa gtggttgttt
    11761 gagtgtgaac cccaggtcag gccaaattca tggcacattt gcgccacacg taccgaacct
    11821 tgcatcgtcc agaaatgcgg atccgccagc gggatatcaa cggattgcag ggagagcgta
    11881 tggcccatct gccgccagtc ggtggcgatc atattggttg cggtcggcag gccagttgcg
    11941 cgacggaact ctgccatcac ttcacgcccg gagaaacctt gctccgcacc acacggatct
    12001 tctgcataag ccagcgaccc tttcaggtat ttaccaattt taatcgcttc gttcagcgac
    12061 caggcaccgt taggatcgag cgtaatacgc gcctgcggga agcgttgcgc cagtgccaca
    12121 atagactcgg cctcttcttc cccggccagt acaccgcctt tcagtttgaa atcgttgaag
    12181 ccatattttt catacgccgc ttccgccagg cgcaccaccg catccggcgt catcgcttct
    12241 tcatgacgca ggcgatacca gtcgcatgag tcatccggct ggctttgata cggcagcggt
    12301 gtggctttgc gatcaccgac gaagaacaga taaccgagca tttcgacttc gctacgctgt
    12361 tgaccatcgc ccagcaggga tgccacgttt acccccagat gctgccccag cagatccagc
    12421 attgccgctt ctatcccggt aactacatga atagtggtac gcaaatcaaa tgtctgcaaa
    12481 ccgcgcccac cagcatcacg atcggcaaaa gtattacgca ccagcgtcag aacgtttttg
    12541 tattcaccca gcgttttacc taccaccagc ggaatcgcat cttccagcgt tttacggatt
    12601 ttctcgccgc cgggaatttc ccctacgcca gtgtgaccag aattatcttt gataatcata
    12661 atattacgcg taaagaacgg tgcgtgtgca ccactcagat tcatcagcat actgtcatga
    12721 cccgccaccg ggatgacctg catttcagta acaacaggcg tcgtaaattg agaactcata
    12781 tttatgtcct ttttcagaat caatgacggc cgaaaacggg acgtttacgg tcaaaggtcc
    12841 agccggggat caggtactgc atcggacctg cgtcgttacg cgcaccgcca ggcagacgtt
    12901 tataggcctc atgtgccttt tgtacctgtt cccagtccag ttccacgccc agaccgggcg
    12961 catcaggaac ggcaattttt ccgtttttaa tctccagcgg atttttggtc aggcgacaat
    13021 cgccctcctg ccaaatccag tgggtatcga tagcggtagg attacccggt gccgccgcgc
    13081 ccacatgggt aaacatcgcc agagagatat cgaaatggtt attagaatgg cagccccagg
    13141 tcagccccca gtcgtcgcaa agctgcgcca cacggactgc accggaaagc gtccagaagt
    13201 gcggatcggc aagtggaata tctaccgcat tgagcatcac cgcatgaccc atttcgcgcc
    13261 agttggtggc gatcatgtta gtcgcgacgg gcaagccggt cgcccgccga aactccgcca
    13321 taacttcacg accggagaaa ccctgttctg cgccgcatgg atcttcggca taggtaagaa
    13381 catcattcag ccctttgcat agagaaatgg cttcatcaag tagccaggca ccgttgggat
    13441 caacggtaat ccgcgcatca gggaagcgtt tcttcaatgc acgaacagtg tcgatttctt
    13501 gctcgccagg taacaccccg cccttaagtt tgaaatcttt aaagccatag cgatcctgtg
    13561 aggcttccgc cagacgcaca acggcttcgc tgttcatcgc tttctgatgg cgcaactgat
    13621 accactcatg gttgcccggc gtattttcca gataaggaag atcggttttg gtccgatcac
    13681 cgatataaaa cagataaccg aggacggtaa tagtctcgcg ttgcttgcct ggccccaaca
    13741 gttcgcagac cggaacattc agcgccttac ctagcaggtc aagcaaggcg gcttccagcg
    13801 ccgccacggc attaacgtgc aattcaaaag tccaggcacc tttgccgaag gtatcaaaat
    13861 cggctgcctg attaccttta tgcacctgct gaaccacttt attcaggcgc gcaacttcct
    13921 ggcccagaac catcggaata gcatcgacca gtgtttgata aatcacctct ccgcccggcg
    13981 cttcaccaat gccggtatgc ccggcgttat cggtgagtac cacaatattg cgggtgaaat
    14041 atgcgttatg tgccccacca atattaagca acatgctatc gtgcccggcg accggaatga
    14101 ctttcatatc agtaataaca ggactggatt gtgtcgtcat cttattgccc cgcgacaggt
    14161 ttcagctcga tacgcttgat atcgcccacc agcaccaggt agctcagtac cgcgattaag
    14221 gcatgaacac caacataaat cagcgcccca ttaaaggagc cagtcgtgcc aacgatataa
    14281 ccaattgcga ttggcgtgac gatgccagaa atgttaccga acatgttgaa caggccaccg
    14341 gaaagaccgc tgatctcttt tggcgcggta tctgccatta ctgcccaacc cagcgccccg
    14401 atgcccttac cgaagaaggc cagcgccata aagccgatga tcatccactc aacgttgacg
    14461 tagttgcaga acaccatcac catcgacagc aacatgccca ttacgatcgg tgttttacgc
    14521 gcaatgttca gcgatcccgt gcggcgcatc agccagtcgg aaataatccc acccagcaca
    14581 ccgccgataa aaccgcaaac cgccggaacg gaagccacaa agcccgcttt cagaattgac
    14641 atcccacgcg cctgcaccag ataaaccgga aaccaggtaa tgaaaaagta agtcagggcg
    14701 ttgatacagt actgaccgat ataaacgccg atcatcatcc gtgacccgag cagttgtttg
    14761 atctgccccc acttcacgct gaacggcact ttaactttgg tgttttgctg atccatattg
    14821 atcagcgcgc cacccgcggc gatgtactcc agctctttct gatttacccc cggatgttga
    14881 tttggctcgt ggatgacttt caaccagata aagctgatga caatccccag accgcccata
    14941 aagaagaaga cgtgtgacca gcccacttca tgcgtcagcc agcccataat cggcgcgaag
    15001 atcaccgttg cgaagtattg agcggagtta aaaatcgaca ccgccgttcc cctttcctgc
    15061 gccggaaacc aggccgcaac aatgcgactg ttgccgggga aagatggcgc ttcagcaagc
    15121 ccgaccagga agcgcagagt aaacagggca acgataatgc cgaatccact aaagatatcg
    15181 acgaagcctt gcagcaaggt aaacatcgac cagataaaga tcgaccagaa gtagacgcgt
    15241 tttgaaccaa aacgatccag caaccaacca ccagggatct gcccgataac ataagcccat
    15301 gagaaggcag agaacacata gcccattccc acgggatcaa ggccgatatc tttggccatt
    15361 tccgaaccgg caatagaaag cgtagcgcgg tcgccgtagt tgaaggatgt gacgataaac
    15421 aacatcacca ctatccagta acgagcattc gtgcgttttt ccacactgct cgcagcctga
    15481 cttaaagaac tcgttgttgc actcctgaaa attcgcgtta gccacgctaa ctctggactg
    15541 cgacatagcc aggaagtcag aggtgacgta gggtgttttt tgccgttttt ataggtcgtt
    15601 cgccgaatac ggcgcgtgtt tatatctggc aatagcagta taaaaagcgc gccatagcgg
    15661 ctcaccgtgc aacaacacaa cattaatgcg ttcaatgagg cccgattttg gcattagccc
    15721 tggacggtgg aatccacttc acggaaatga aaacaagaac aagaaaggaa gggttaaaac
    15781 gaagaaataa agaagagtat gaaatggatc gcttgactcc aggcaaacgc cagtaaaaat
    15841 ccgcgctatg aagcagtttt tactggcatt tgcctgaaaa gattcgattc agcaccgcta
    15901 aaacgacatt taccgctcgc tgaacatatc aggacaacag cgtgccccac tgttcgaccc
    15961 acggatttga ttccgtttcc ggttccgggt tctcactggc gtcaatcaac agcatttcgc
    16021 caactcgctg agcgctctgt tcctgcaaca aggcatcgaa ctgtttgccg ccattgcaga
    16081 aatttacata actgctgtcg ccgagcgcaa tcacgccata acgcagattc ggctggaagc
    16141 ccagactatc tttgattccc tgaaagagcg gcacaatgct atcaggaagg tcgccctgcc
    16201 cggtcgtgga cgtaaccacc agaacatact tatcctgata aggcagccag tcgcttaatt
    16261 caggatcttc aaataccgtt gctttgtggc cctgtgcggt cagaattgct tctgcttctt
    16321 ccgccactaa cagcgaattt ccgtacatgg tgccgacaaa aataccaatt tccgccatac
    16381 cgttttctcc ctggattagg aacttatctc tccatcctga cccgatggcg cactgaactc
    16441 aaccctttca ttttcaggaa gcagaccgcg ccagccaaat tgtgataacg cctgcatcca
    16501 ggtgtcgtcc aggcccgcgt gaatagtcag cggctcgcca gtaaaaggat gcgtcaatga
    16561 caactgactg gcatgtagca ttaaccgctg gaggccaaaa tgctcagcac cgctgcgatt
    16621 ctggcgtaaa tcgccatgtt tgctatcgcc aataatcgga tgacgcaaat gggcaagatg
    16681 tcggcgaagc tgatgtttgc gtccggtttt cggctccagt tccaccaggc cgtagcgcgt
    16741 ggtcgggtaa cgtccggtcg ctaccggcat ttctacggtc gccagaccgc gataatgcgt
    16801 cactgctggc tgcgggcctt tatcttcgcg ggcaaattta tcagcgattt tgtccagttc
    16861 ttccaccagt ggataatcca gcaccgcttc ttccatcaac cagccgcgca caatcgcatg
    16921 gtaacgtttc tggatttggt gctgttcaaa ctgttgtgcc agcagccgtc cggcctcgct
    16981 ggataatccc atcaacaaca caccagaagt gggtcggtcc agacgatgag cagtaaaaac
    17041 atgctgtcct atctggttac gcacggtttg catgaccact actttctcgt cgcgatccag
    17101 ccagctacgg tgaaccagcc agccggaggg tttatttacc gaaaccagcc attcatcctg
    17161 atagagtatt tccagcatta gctcgcatca tccgcaaaaa gagcatccag tttttccaac
    17221 tcagccagaa taagcgcgtg ttgcggatgg tccgtcgcca gcgccatttc ataatagggt
    17281 gcaacagcaa aagcgcccgg taacggctgg ttgttattta acaaatcgtg cattcgcggg
    17341 atcagcaccc actgcaacca ctccagtggt tccatggtgt ccataaagaa cggttgggta
    17401 ctattaaatt gatgcggctg gggttcatcg tttcgccagt gctgatgttc acgcagtaac
    17461 gcttcaagcg cctgcaactg gagacgaacg cggtcatgag tggtcataaa gcaacctcaa
    17521 taagaaaaac tgccgcgaag gatagcagga ataaaaaaag ggagcactgt attcacagcg
    17581 ctcccggttc gtttcgcagc attccagcta cttttgttgc tccctgctca tccttgacaa
    17641 cttttcctct ggccttgcgg ccaatcgttc atcctgaact attgcttcct gctcacacca
    17701 ccccgatgtg atacttcatc ctgaagtgtc cttggccttc ctgaccagcc gaatcatcct
    17761 gaccggttct cattctccat cctggaggtg tcctttaacg cgtcctgcgt catcctcttc
    17821 gcttcatcca gaagcctttc cctgaaacac catcctggtg tgtcctgcag aagtgtcatc
    17881 atcctgatgt tcacttcgtt gtctgactcc ctgtcgacga agatagaatc gtctttttcg
    17941 cgaagtctta caaggcgctt acagacaatg ccttaaggaa aatttcatat gaaagttaag
    18001 aattaacaat caacattttg attttaaatg aaaataacga ttcttatctt tttaagtatt
    18061 cgcttatttc ctggcgatct cctacagagt ctgtaagaga tctctcacaa ccagatgggg
    18121 tatttggatt acagaagagg cttaagttga ttaaggaatt ccgcaagatt tgaggctaaa
    18181 tgcgtccgtt tacgtgttcc cagcgtctct ttgcacactt caccggagag attacacacc
    18241 gagatgacct ctaactcttc ttccagcgtc gcgataaata gcgtgggcgg cagttttagc
    18301 cttttctgag tcaccagatg accaatcaga ttttcctgca cccgacggaa gtcgtcttca
    18361 ctccaggttt gcagcaatgt cagtttgata tcgccaaact gcgcgtgcat atccccggca
    18421 aactgagtcg tataaaaggt atgaattgtg ggttgtatca caatatcaaa agcgcgttca
    18481 accgcgttta cattttgttc cccggtaaac ggctggggtt gccagtatac ggcatcttcg
    18541 gtagttgaaa taatgcacgg tgaaggaaca ccgtacagtt cctcacttaa cggccagctt
    18601 ttatgctctt catgccacgc atcgcagtag cgtgcagtaa aatctttcag ggcttgtgcg
    18661 gtcaaatcgt ccactaattt ctctcttcac ttaaaccaga tacacttgtc gtttagttta
    18721 tctggtttat gacggtgaaa catgtcttct tatgcaaacc atcaggcact tgcgggcctg
    18781 actcttggaa aatcaaccga ttaccgggat acctatgacg ccagcctact gcaaggcgtt
    18841 ccacgcagcc tgaatcgcga cccgctgggt ctgaaagcgg ataacctgcc ttttcacggt
    18901 acggatatct ggacgctgta tgaactttcc tggctgaatg cgaaaggttt gccgaaggtc
    18961 gctgtcggtc atgttgaact tgattacacc agcgtaaatc tgattgagtc gaagagtttt
    19021 aagctctatc tcaacagttt taaccagacg cgttttaata actgggatga ggtgcgccag
    19081 acgctggagc gcgacttaag cacttgcgct cagggtaaga ttagcgtggc gttatatcgt
    19141 cttgatgaac tggaaggcca gccgataggt cattttaatg gcacttgcat tgatgaccag
    19201 gatatcacta tcgataacta tgaattcact actgactatc tggagaatgc cacctgtggt
    19261 gaaaaagtag tggaagagac gcttgtcagc cacctgctga aatcaaactg cctgatcacc
    19321 catcaaccag attggggttc gatccaaatt cagtatcgtg gacgccaaat tgacagagaa
    19381 aaactgctgc gttacctggt ctcattccgt catcacaacg agttccacga acagtgcgtg
    19441 gaacgcatct ttaatgacct gttacgcttc tgccagccag aaaaattgag cgtttacgca
    19501 cgttataccc gtcgtggcgg tctggacatt aacccgtggc gcagtaatag cgattttgtc
    19561 ccatcgacca caagactggt tcggcaataa attttttctc aattttgcgt gctggattca
    19621 cgcagaaggt tgtgaaaggt catcaggcag ggctattgta atcaaaggga atgacgatat
    19681 tcgtcccata aggagttttt cttgattaca catattagcc cgcttggctc catggatatg
    19741 ttgtcgcagc tggaagtgga tatgcttaaa cgcaccgcca gcagcgacct ctatcaactg
    19801 tttcgcaact gttcacttgc cgtactgaac tccggtagtt tgaccgataa cagcaaagaa
    19861 ttgctgtctc gttttgaaaa tttcgatatt aacgtcttgc gccgtgaacg cggcgtaaag
    19921 ctggaactga ttaatccccc ggaagaggct tttgtcgatg ggcgaattat tcgcgctttg
    19981 caggccaact tgttcgcggt cctgcgtgac attctcttcg tttacgggca aatccataac
    20041 accgttcgtt ttcccaacct gaatctcgac aactccgtcc acatcactaa cctggtcttt
    20101 tccatcttgc gtaacgctcg cgcgctgcat gtgggtgaag cgccaaatat ggtggtctgc
    20161 tggggcggtc actcaattaa cgaaaacgag tatttgtatg cccgtcgcgt cggaaaccag
    20221 ctgggcctgc gtgagctgaa tatctgcacc ggctgtggtc cgggagcgat ggaagcgccg
    20281 atgaaaggtg ctgcggtcgg acacgcgcag cagcgttaca aagacagtcg ttttattggt
    20341 atgacagagc cgtcgattat cgccgctgaa ccgcctaacc cgctggtcaa cgaattgatc
    20401 atcatgccag atatcgaaaa acgtctggaa gcgtttgtcc gtatcgctca cggtatcatt
    20461 atcttccctg gcggtgtggg tacggcagaa gagttgctgt atttgctggg aattttaatg
    20521 aacccggcca acaaagatca ggttttacca ttgatcctca ccggcccgaa agagagcgcc
    20581 gactacttcc gcgtactgga cgagtttgtc gtgcatacgc tgggtgaaaa cgcgcgccgc
    20641 cattaccgca tcatcattga tgacgccgct gaagtcgctc gtcagatgaa aaaatcgatg
    20701 ccgctggtga aagaaaatcg ccgcgacaca ggcgatgcct acagctttaa ctggtcaatg
    20761 cgcattgcgc cagatttgca aatgccgttt gagccgtctc acgagaatat ggctaatctg
    20821 aagctttacc cggatcaacc cgttgaagtg ctagctgccg acctgcgccg tgcgttctcc
    20881 ggtattgtgg cgggtaacgt aaaagcagtc ggtattcgcg ccattgaaga gtttggtcct
    20941 tacaaaatca acggcgataa agagattatg cgtcgtatgg acgacctgct acagggtttt
    21001 gttgcccagc atcgtatgaa gttgccaggc tcagcctaca tcccttgcta cgaaatctgc
    21061 acgtaatctc ccctcccccg gtgacgtttg ttgccgggtt ttctcgtttt tggtcactta
    21121 ctcatcaact catttcattt gttatatgaa tgtttcttac caccctcacg cgacaaatat
    21181 catcacagtt aatatgtcat acaatttatg ttgcaacgca aacgtttctc tattttcata
    21241 aaccgtattt tatcgctatg aaaaagaaat tatcgccatg attaactaaa agtattgatt
    21301 ttttcagttc aacctacata tattgcgcgc cctggaagaa gtcagatgtc gtttaatggg
    21361 caaatattgc ccttaaattc tcttttactt ttgatttaca gagtaaagcg ttgggataat
    21421 ctatcttcca agtagattat tgtatttgag atcaagatca ctgatagata cataacttgt
    21481 gtgtatcttt ccgccctcaa attattacgg cggtaaatga ttaagccatc gccgatagac
    21541 agatttcatt tttacggtca ggcaccttcc cgggctgaac tggctaaaag ctgaattatt
    21601 tgcattcctc caggagaaat agatggaaac gactcaaacc agcacgattg cgtcgaaaga
    21661 ctctcgtagt gcctggcgca agacagacac catgtggatg ctgggccttt acggcacggc
    21721 aatcggcgcg ggcgtgctgt tcctgccaat caacgccggt gttggcggta tgatcccgct
    21781 gatcatcatg gctatccttg cgttcccgat gacgtttttt gctcaccgcg gcctgactcg
    21841 cttcgtactg tctggtaaaa acccgggcga agacatcacc gaggttgtag aagaacactt
    21901 tggtattggc gcaggtaaac tgattaccct gctctacttc ttcgctatct acccgatcct
    21961 gctggtttat agcgtggcaa tcaccaatac agttgaaagc ttcatgtctc accagctggg
    22021 tatgacgcca ccgccgcgtg cgattctgtc gctgatcctg atcgtgggta tgatgaccat
    22081 cgttcgcttc ggtgagcaga tgatcgttaa agcgatgagt attctggtgt tcccgtttgt
    22141 tggcgtattg atgctgctgg ctctgtacct gatcccgcag tggaacggcg cagcactgga
    22201 aacgctgtct ctggacactg catctgcaac cggaaacggt ctgtggatga ccctgtggct
    22261 ggcaattccg gtaatggtgt tctcgttcaa ccactctccg atcatctctt ctttcgccgt
    22321 tgcgaagcgt gaagagtacg gcgatatggc agaacagaaa tgctcgaaga tcctggcatt
    22381 cgcacacatc atgatggtgc tgaccgtaat gttcttcgtc ttcagctgtg tactgagcct
    22441 gactccggca gacctggctg cggctaaaga gcagaacatc tcgattctgt cttacctggc
    22501 taaccacttt aacgcaccgg ttatcgcgtg gatggctccg attatcgcga ttatcgctat
    22561 caccaaatcc ttcctcggcc actacctggg cgcacgtgaa ggcttcaacg gtatggtgat
    22621 taaatctctg cgtggtaaag gtaagtctat cgaaatcaac aagctgaacc gtatcactgc
    22681 gctgttcatg ctggtaacga cctggattgt tgccaccctg aacccgagca tcctgggtat
    22741 gattgaaacc ctgggcggtc caatcatcgc gatgatcctg ttcctgatgc cgatgtacgc
    22801 aattcagaaa gtaccggcaa tgcgtaagta cagcggtcac atcagcaacg tattcgttgt
    22861 cgtgatgggt ctgattgcaa tctccgcaat cttctactct ctgttcagct aagtcctttc
    22921 gcgccgcttt cgggcggcgc ttcctccgtt ttaacgcgat gtatttccta tgattagcgt
    22981 attcgatatt ttcaaaatcg gcattggccc ttccagttct cataccgttg gaccaatgaa
    23041 agcgggtaaa caatttaccg acgatctgat tgcccgtaac ctgcttaaag acgtgacccg
    23101 cgtggtggtt gacgtgtacg gctcgctctc tctgaccggt aaaggccacc acactgatat
    23161 cgccattatt atgggcctgg cgggtaacct gccggatacc gtggatatcg attccatccc
    23221 tggttttatt caggatgtga atactcatgg tcgcctgatg ctggcaaacg gtcagcatga
    23281 agtggagttc ccggttgatc agtgcatgaa cttccacgcc gacaaccttt ctctgcatga
    23341 aaacggtatg cgcattaccg cgctggcggg cgataaagtc gtttacagcc agacttacta
    23401 ctctattggc ggtggcttta tcgttgatga agagcatttt ggccagcagg atagcgcacc
    23461 ggttgaagtt ccttatccgt acagttcagc agccgatctg caaaaacatt gtcaggaaac
    23521 cgggctgtca ctctctggcc tgatgatgaa aaacgagcta gcgctgcaca gcaaagaaga
    23581 gctggaacag cacctggcga acgtatggga agtcatgcgt ggcggtattg agcgcggtat
    23641 ttccaccgaa ggcgtgttgc ctggcaaact gcgcgttcca cgccgtgctg cggcactacg
    23701 ccggatgctg gtcagccagg ataaaaccac cactgacccg atggcggttg ttgactggat
    23761 caacatgttt gcactggcag tgaacgaaga gaacgctgct ggcggacgcg tggtgactgc
    23821 gccgactaac ggtgcgtgcg ggattatccc ggcagtgctg gcgtactacg acaagtttat
    23881 ccgcgaagtg aacgctaact cactggctcg ttacctgctg gtagccagtg ccattggttc
    23941 tctttataag atgaacgcgt caatttctgg tgctgaagtc ggctgccagg gtgaagttgg
    24001 tgtggcgtgc tcaatggcgg cggctggtct ggcagaactg ttaggtgcaa gcccggcgca
    24061 ggtgtgcatc gcggcggaaa tcgccatgga gcacaacctc ggtctgacgt gtgacccggt
    24121 cgccggacag gtccaggtgc catgcatcga gcgtaacgcc attgcggcag taaaagcggt
    24181 gaacgccgca cgtatggcgc tacgccgtac cagcgagccg cgcgtctgcc tcgataaagt
    24241 tatcgaaacc atgtacgaaa caggtaaaga tatgaacgcc aagtaccgcg aaacctctcg
    24301 cggcggcctg gcaatgaaga tcgttgcctg cgattaatcg ctctccagag gcctcgtttt
    24361 gcgaggcctc ttcccgattt ctcatccagc cgtagcctgt tccggcatcg aatgttaccc
    24421 ttatcgcctg atctttaagg gggttatcgt ggctgttcat ttgcttattg tcgatgcact
    24481 gaatcttatt cgtcgcattc atgccgttca gggatcgccc tgtgtcgaaa cctgccagca
    24541 tgcgctcgat cagctcatta tgcacagcca gccaacccac gcggtcgccg tttttgatga
    24601 tgaaaaccgc agtagcggct ggcgtcatca gcgtttacca gattacaaag cgggtcgacc
    24661 gccaatgccg gaagagttgc acgacgagat gcctgcatta cgcgccgcct ttgagcaacg
    24721 cggcgtcccg tgctggtcaa ccagcggcaa cgaagccgat gacttagccg ccacgctggc
    24781 ggtcaaagtg acacaggccg ggcatcaggc aacgattgtt tcgacagata aaggctactg
    24841 tcagttactt tcaccgacat tacgtattcg tgattacttc cagaaacgtt ggctggatgc
    24901 accatttatc gataaagaat ttggcgttca accgcagcag ttgcccgatt actggggact
    24961 tgcggggatc agcagttcaa aggtaccggg tgttgcggga atcggaccaa aaagcgccac
    25021 gcagctgctg gtcgagtttc agagtctgga agggatatat gagaatctgg atgcggttgc
    25081 cgaaaagtgg cgcaaaaaat tagaaaccca taaagagatg gcgtttctgt gccgcgatat
    25141 tgcccgctta caaaccgatt tgcatatcga cggcaattta cagcaattgc ggttggtacg
    25201 gtaacggcga gccggatgca aacgattatc aacacattga atttaatgca cttatatacc
    25261 ggataagacg cggctagcgt cgtatccggc attatcacat cagcgcattt accaggcggt
    25321 atggtaaagc tctacaatat cctcaagcgt tgcttcacgc gggttgccac cggtacaaac
    25381 atcatccagt gccgcctgcg ccagtgccgg aatgtcttcc ttgcgtacac caacatcacg
    25441 caaatgtggc ggaataccga catcacggtt gagagcaaac accgcttcaa cagcggcatt
    25501 acgcgcctct tccagccact ttcacgccca taacgcgcgc gatatcgcgg tacttctcac
    25561 cggtaaagtc agcgttatag cgcatgacat gcggtaacag gatggcgttc gcaacaccgt
    25621 gtggagtgtt gtaaaacgcg cccagtggat gcgccatacc atgcaccaac cctaacccaa
    25681 cattcgagaa gcccataccc gcaacatact gcccgagcgc catttcttct ccggcatcct
    25741 tatcaccagc aaccgatcct cgcagcgccc cagcaatgat ttcaatcgct ttaatgtgca
    25801 gtgcatcggt tagcgcccac gcgccacggg taatataccc ctcaatagca tgagtgagcg
    25861 catcgacacc cgtcgcagct ttcagcgctg gaggcatacc atccatcatg tcagcgtcaa
    25921 taaacgccac ctgcgggata tcatgcggat caacgcaaac aaacttgcgc cgtttctctt
    25981 cgtcagtgat cacgtagtta atggtcactt ctgccgcagt acctgctgtg gtaggaattg
    26041 ccagaatcgg tacactgggt ttattggtcg gggaaagccc ttccaggcta cgcacatcgg
    26101 caaactccgg gttgttgctg ataatgccaa tcgctttaca agtatcctgt ggagaaccac
    26161 caccaatagc gatcaggtaa tccgcgccgc tattctggaa tacaccgagc ccttctttga
    26221 cgacagtaat tgttgggttg ggcactacgc cgtcgtaaat cgcccatgcc agccctgcag
    26281 catccatctt atcggtcact ttcgccacca cgccgcattg caccagcgtt ttatcggtga
    26341 cgatcagcgc cttctgataa ccacggcgtt tcacctcatc ggttaaagcc ccaacagcac
    26401 cccgaccaaa ccatgccgtt tcgttcagaa tcattctgtt agccatcatc cttctccttg
    26461 ttgctttacg aaattactct tcaatccgta acccataggt tttgaatttc tccagcacta
    26521 cggcaatctc ttcatcgctc agcactggca ccgggtccgt aatcgccagg gtcgtcaggt
    26581 aaagttgcgc cagcacttca acttcatgcg ccagccataa cgctttttcc agattcacct
    26641 cacaagcgat aagcccatga tgttgtaaca aagttgcctt acgatttttg agagccagcg
    26701 caacatgttc agaaagttcg cgtgttccaa aggtcgcata aggcgcgcaa ggaatagaat
    26761 taccacctgc cgccgcaatc atgtagtgaa tagcggggat cggtcggtta agaatggaaa
    26821 ctgctgtgca atgaacggca tgattgtgaa caaccgcgtt ggcatccggt ctgctttgat
    26881 aggccgccat atggaaacgc cattcgcttg aggggagctt tccttcctca tgtttaccgt
    26941 taccatcaat aaaggcaata tgcgactccg tcagtttttc atatggaatg cctgtaggcg
    27001 taatcagcat cccatcctga taacgtacac tgacgttccc cgctgtcccc tggttcagtc
    27061 ccaggcgggt catttccagg caagtgtcaa taatctgacg agcaagttta tttcgttcca
    27121 ttagctacct ctctctgatt caaaacaggg caataatgtt gttcctttca cactattgaa
    27181 ttagccgttt aattacccac catat
//
LOCUS       DADMIB010000042        26806 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.042, whole genome shotgun sequence.
ACCESSION   DADMIB010000042 DADMIB010000000
VERSION     DADMIB010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 26806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26806
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.042"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..326)
                     /locus_tag="JNZ89_001675"
     CDS             complement(<1..326)
                     /locus_tag="JNZ89_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8935586.1"
                     /translation="MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTT
                     LKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA
                     MQNHLDA"
     gene            complement(523..1296)
                     /gene="hisP"
                     /locus_tag="JNZ89_001676"
     CDS             complement(523..1296)
                     /gene="hisP"
                     /locus_tag="JNZ89_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter ATP-binding protein
                     HisP"
                     /protein_id="HAY8935587.1"
                     /translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK
                     STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
                     LWSHMTVLENVMEAPIQVLGLSKQEAHERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
                     VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
                     STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK"
     gene            complement(1304..2020)
                     /locus_tag="JNZ89_001677"
     CDS             complement(1304..2020)
                     /locus_tag="JNZ89_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8935588.1"
                     /translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL
                     AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGIYTLEIVKGTEFLNAFFRSGL
                     NCTVLALTLNTCAYTTEIFAGAIRSVLHGEIEAARAYGFSTFKMYRCIILPSALRIAL
                     PAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI
                     SLFRRAEKRWLQHVKPSSTH"
     gene            complement(2017..2703)
                     /locus_tag="JNZ89_001678"
     CDS             complement(2017..2703)
                     /locus_tag="JNZ89_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311219.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HAY8935589.1"
                     /translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL
                     SGLIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGF
                     IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV
                     ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR
                     YSVGVKRADL"
     gene            complement(2793..3575)
                     /gene="hisJ"
                     /locus_tag="JNZ89_001679"
     CDS             complement(2793..3575)
                     /gene="hisJ"
                     /locus_tag="JNZ89_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter substrate-binding
                     protein HisJ"
                     /protein_id="HAY8935590.1"
                     /translation="MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNS
                     QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
                     IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
                     SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG
                     MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG"
     gene            complement(3796..4578)
                     /gene="argT"
                     /locus_tag="JNZ89_001680"
     CDS             complement(3796..4578)
                     /gene="argT"
                     /locus_tag="JNZ89_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine/arginine/ornithine ABC transporter
                     substrate-binding protein ArgT"
                     /protein_id="HAY8935591.1"
                     /translation="MKKSILALSLLVGLSVAASSYAALPETVRIGTDTTYAPFSSKDA
                     KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
                     IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV
                     AYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTG
                     VGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD"
     gene            complement(4844..5413)
                     /locus_tag="JNZ89_001681"
     CDS             complement(4844..5413)
                     /locus_tag="JNZ89_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HAY8935592.1"
                     /translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL
                     SLETDFSLREVQALADVTHDARDISASISSGSFQTLGMVILPCSIKTLSGIVHSYTDG
                     LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
                     DVINQTVNRVLDQFAISLPEDLFARWQGA"
     gene            complement(5508..7025)
                     /gene="purF"
                     /locus_tag="JNZ89_001682"
     CDS             complement(5508..7025)
                     /gene="purF"
                     /locus_tag="JNZ89_001682"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HAY8935593.1"
                     /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
                     LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
                     GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
                     NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG
                     FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
                     VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
                     FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
                     LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE
                     NPDIQQFECSVFNGVYVTKDVDQDYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG"
     gene            complement(7062..7550)
                     /gene="cvpA"
                     /locus_tag="JNZ89_001683"
     CDS             complement(7062..7550)
                     /gene="cvpA"
                     /locus_tag="JNZ89_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin V production protein"
                     /protein_id="HAY8935594.1"
                     /translation="MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHY
                     YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV
                     CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
                     RA"
     gene            complement(7809..8471)
                     /gene="dedD"
                     /locus_tag="JNZ89_001684"
     CDS             complement(7809..8471)
                     /gene="dedD"
                     /locus_tag="JNZ89_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416817.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DedD"
                     /protein_id="HAY8935595.1"
                     /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV
                     PKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPA
                     PVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
                     VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYT
                     PN"
     gene            complement(8461..9729)
                     /gene="folC"
                     /locus_tag="JNZ89_001685"
     CDS             complement(8461..9729)
                     /gene="folC"
                     /locus_tag="JNZ89_001685"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HAY8935596.1"
                     /translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGV
                     LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE
                     SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD
                     ADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSAKPAIVGEPEMPSTIADVAQEKGA
                     LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA
                     IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH
                     DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADA
                     KAEDTVLVCGSFHTVAHVMEVIDARRSGGK"
     gene            complement(9799..10713)
                     /gene="accD"
                     /locus_tag="JNZ89_001686"
     CDS             complement(9799..10713)
                     /gene="accD"
                     /locus_tag="JNZ89_001686"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HAY8935597.1"
                     /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
                     VCPKCDHHMRMTARNRLHSLLDEGSLVEMGSELEPKDVLKFRDSKKYKDRLASAQKET
                     GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS
                     ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
                     AEPKALIGFAGPRVIEQTVREKLPLGFQRSEFLIEKGSIDMIVRRPEMRLKLASILAK
                     LMNLPAPNPEAPREGVVVPPVPDQEPEA"
     gene            complement(10869..11528)
                     /locus_tag="JNZ89_001687"
     CDS             complement(10869..11528)
                     /locus_tag="JNZ89_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8935598.1"
                     /translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
                     VTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFS
                     NPDSKIFRCSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
                     VIGALLWVLIFTYAGYFFGMLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAA
                     K"
     gene            complement(11611..12423)
                     /gene="truA"
                     /locus_tag="JNZ89_001688"
     CDS             complement(11611..12423)
                     /gene="truA"
                     /locus_tag="JNZ89_001688"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HAY8935599.1"
                     /translation="MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
                     QVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPDDIAVRWVKA
                     VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND
                     FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN
                     QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD"
     gene            complement(12423..13436)
                     /locus_tag="JNZ89_001689"
     CDS             complement(12423..13436)
                     /locus_tag="JNZ89_001689"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HAY8935600.1"
                     /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAG
                     EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL
                     EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS
                     ASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD
                     EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEE
                     NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE
                     YLY"
     gene            complement(13502..14638)
                     /gene="pdxB"
                     /locus_tag="JNZ89_001690"
     CDS             complement(13502..14638)
                     /gene="pdxB"
                     /locus_tag="JNZ89_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase PdxB"
                     /protein_id="HAY8935601.1"
                     /translation="MKILVDENMPYARDLFSRLGEVTAVPGRPIAVAQLADADALMVR
                     SVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSS
                     LLMLAERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRS
                     LDELVQHADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALL
                     TCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSK
                     FIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPG
                     EFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR"
     gene            14737..15732
                     /locus_tag="JNZ89_001691"
     CDS             14737..15732
                     /locus_tag="JNZ89_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulator Flk"
                     /protein_id="HAY8935602.1"
                     /translation="MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKV
                     TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ
                     LGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT
                     DRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL
                     QARQTLSQQNTPTLESLQMALKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL
                     NQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR"
     gene            complement(15729..16907)
                     /locus_tag="JNZ89_001692"
     CDS             complement(15729..16907)
                     /locus_tag="JNZ89_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8935603.1"
                     /translation="MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH
                     DLGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAA
                     ILPVSAPLKFALLVVGRLILGFGESQLLTGALTWGLGIVGAKHSGKVMSWNGMAIYGA
                     LAVGAPLGLLIHSHYGFAALAITTMVLPLLAWACNGTVRKVPALAGERPSLWSVVGLI
                     WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRF
                     GGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ
                     VRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
                     "
     gene            complement(17227..18447)
                     /gene="fabB"
                     /locus_tag="JNZ89_001693"
     CDS             complement(17227..18447)
                     /gene="fabB"
                     /locus_tag="JNZ89_001693"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HAY8935604.1"
                     /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM
                     RSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLI
                     AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS
                     SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
                     SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
                     AVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS
                     LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF
                     GGTNATLVMRKLKD"
     gene            18606..20612
                     /gene="mnmC"
                     /locus_tag="JNZ89_001694"
     CDS             18606..20612
                     /gene="mnmC"
                     /locus_tag="JNZ89_001694"
                     /EC_number="1.5.-.-"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HAY8935605.1"
                     /translation="MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
                     GNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK
                     FPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL
                     TSQQDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRR
                     GLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIAC
                     ALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFAR
                     RFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVA
                     TNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQ
                     QATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQ
                     NPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGV
                     RCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAP
                     LCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG"
     gene            complement(20733..21011)
                     /locus_tag="JNZ89_001695"
     CDS             complement(20733..21011)
                     /locus_tag="JNZ89_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcL family protein"
                     /protein_id="HAY8935606.1"
                     /translation="MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELES
                     GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ"
     gene            complement(21045..21593)
                     /locus_tag="JNZ89_001696"
     CDS             complement(21045..21593)
                     /locus_tag="JNZ89_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HAY8935607.1"
                     /translation="MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPY
                     NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ
                     ALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKA
                     LQNYYHTPELTAEQFPWPEALN"
     gene            complement(21593..22402)
                     /locus_tag="JNZ89_001697"
     CDS             complement(21593..22402)
                     /locus_tag="JNZ89_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HAY8935608.1"
                     /translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM
                     AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFAGSMSGALLVQ
                     YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
                     PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG
                     QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
     gene            complement(22402..23226)
                     /gene="mepA"
                     /locus_tag="JNZ89_001698"
     CDS             complement(22402..23226)
                     /gene="mepA"
                     /locus_tag="JNZ89_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HAY8935609.1"
                     /translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC
                     IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPA
                     GGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEI
                     FSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPA
                     DSLECEDQPLPPPGDGCGAELQSWFAPPKPGTTKPEKKTPPPLPPSCQALLDEHVI"
     gene            complement(23230..24315)
                     /gene="aroC"
                     /locus_tag="JNZ89_001699"
     CDS             complement(23230..24315)
                     /gene="aroC"
                     /locus_tag="JNZ89_001699"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HAY8935610.1"
                     /translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGILLTEADLQHD
                     LDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF
                     RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
                     GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL
                     GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI
                     LGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA
                     MLAIVLMDHLLRQRAQNADVKTDIPRW"
     gene            complement(24350..25282)
                     /gene="prmB"
                     /locus_tag="JNZ89_001700"
     CDS             complement(24350..25282)
                     /gene="prmB"
                     /locus_tag="JNZ89_001700"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HAY8935611.1"
                     /translation="MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDE
                     AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
                     EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVD
                     AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
                     LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV
                     PFTWLEFDNGGDGVFMLTKEQLLAAREYFAIYKD"
     gene            25448..25999
                     /gene="smrB"
                     /locus_tag="JNZ89_001701"
     CDS             25448..25999
                     /gene="smrB"
                     /locus_tag="JNZ89_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HAY8935612.1"
                     /translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV
                     KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG
                     LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
                     EYGGDAALLVLIEVEEWLPPELP"
     gene            complement(26072..26785)
                     /locus_tag="JNZ89_001702"
     CDS             complement(26072..26785)
                     /locus_tag="JNZ89_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005007603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2544 domain-containing protein"
                     /protein_id="HAY8935613.1"
                     /translation="MATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDSR
                     VSMSACPGLEQYDSQTKTGWTCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDD
                     DFPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQSTGGVIEQTLPTFLMEN
                     GKLCNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDT
                     TSRQPIDSTCRFTYILNMY"
BASE COUNT         6611 a         7329 c         6759 g         6107 t
ORIGIN      
        1 gcatcaagat ggttttgcat tgccgcaatg gaataacgca tcatgcgaaa agccattaat
       61 tcttccggct tactttggtg ctctatcact acataaatat aacccactcc ctcctgcgtt
      121 ttcacagacc acaagaggtc ggaataatat tgccgcaggt cttcatcaat aaaactgttt
      181 ggttccagtt taagcgtcgt taaatcacac agtttgcgca gcggcgcggg aagatgaata
      241 tcaataaaat cccgcgcggt gtctggatgg cgtaaaaaag atttaaatac cgcatcatgc
      301 ggcgtggaag ttgtcgatat tgtcatggcg ttccgtcacc cctcaaattt aagatgacgc
      361 gacaataacc acgattaaca cccaatgcag caggcagttt ttatctttgg acagcgaatt
      421 cagaagtatt tttagcggac tgcaactttt acatttcagc ggaagctgac tcgcaaattc
      481 cccatgaaaa tactccggca gcgttagcca ccggagagga aattatttca gcgatccctt
      541 aaggaactgt tgcagacgag ggctttgcgg gttgccaaat aactgctccg gcgcgccctc
      601 ttcttctatt ttcccctgat ggaggaaaat gacatgagta gaaacatggc gagcaaagcc
      661 catttcgtga gtcactacca ccatggtttt cccctcttct gccagttgct gcataatacg
      721 caacacttcg cctaccagtt caggatcgag cgccgaggta ggttcatcaa acagtaaaac
      781 ttccggttcc atcgccagcg cccgcgcgat agaaacacgc tgttgctgac cgccggaaag
      841 atgcaccgga tatttcccct gcgcacgttc gtctatcccg acttttgcca gatacttgac
      901 cgcccgctcg tgcgcttcct gcttgctcag gcccaacacc tgaatcggcg cttccatgac
      961 gttttccagc accgtcatat ggctccagag attgaagtgc tggaatacca tcgtcaggcg
     1021 tgtgcgcagt aagcgcagtt gatttttatc ggcgactttg agttgaccgt ctttgtcgcg
     1081 caccagattg atcgtctggc cattgaccac gatcgaccct tcactcggtt tttcgaggaa
     1141 gttaatgcag cgcagaaagg tacttttccc cgatcccgac gatccgatga tgcttattac
     1201 atctccggca ttcgcttgca gtgagacccc tttcagcact tcatgttcgc cgtagcgttt
     1261 gtgcaaatcg ataacgttta atttattctc ggacatcgta ttctcagtgc gttgaagaag
     1321 gtttcacatg ctgcaaccag cgtttttccg ctctgcgaaa gaggctgatc aggacataag
     1381 agatgattaa atagagcacc gcggcaatgc cgaaggcggt aaaaggttga tacgtggcgg
     1441 cgttaatatc gcgggctatt ttcagcagat ccggcacagt ggccgtaaac gccagcgcag
     1501 tagagtgcag catcaggatc acttcgttgc tgtatgccgg taacgcaata cgcagcgcag
     1561 aaggcaaaat aatgcaacga tacattttaa aagtcgagaa gccataggct ctggcggctt
     1621 caatttcccc atgcagaacc gaacggattg ccccagcaaa aatctcggta gtgtaagcgc
     1681 aggtgttaag cgtcagcgcc agcacggtac agttcaggcc actgcggaag aaagcgttaa
     1741 ggaattcggt tcccttaaca atctcaagcg tgtatatgcc ggaatagaac accagcaact
     1801 gaacatacag cggcgtaccg cgaaaaatat aggtaaataa ccagattgga aactggatgt
     1861 atttattact ggagacacga ccaatcgcca gaaacagcgc caggactccg cctatcacta
     1921 ccgacaaaat aagcagccac agagtgatcg ccacaccagt aaagcgataa ccgtcggtcc
     1981 acagcagcgg tttccagtat tcatgtaaga tttcgatcac aggtcagccc tcttcacacc
     2041 cacggagtag cggcgctcaa ggaacagcag cacaccattg gaaacagtgg tgaaaaccag
     2101 gtaaatcacg ccacagacga tggcgaaata gaacggttcc caggtacttt tgcctgccag
     2161 ttgggtggct ttgaccacat cttccaggcc gagtaacgaa accagtgcgg tagatttgag
     2221 gatcacctgc cagttgttgc caatgcctgg cagggcgtaa cgcatcatcg ccggaaacat
     2281 gatccgccga aacacttgcc cacgagtaaa accgaacgcc gtcgccgcct ctatatgtcc
     2341 tttcggcact gccataaaag caccacggaa cgtttcggta aaataagcac cgtagataaa
     2401 accgagagtg ataataccag cgaccatcgg atcgatatca atctgcccga cgcccatcgc
     2461 ctccgtcacc gtgtttagcg caatctgcaa accgaagaaa atcagcagca tcaacactaa
     2521 gtccggcacg ccacgaatca gcgtggtgta cccttcgaaa atcagccccg aaagccgatt
     2581 ttgcgagagc ttaccgccag cgccaattaa accgatgatt acagcgagca ctacagagct
     2641 gatagccagc tccagcgtga cgagcgcacc ctgtaaaata acacctgaaa acccatataa
     2701 catgctgcct gtcctgtcgt gtgtggtgaa ttaccgcctc ttgtctccct ccggttaccc
     2761 gaagggagcg ggctttcttt caccgatggc gattagccac cataaacatc aaaatcgaag
     2821 tactttttcg ctaatttctc gtaagtaccg tcagcgcgca tttcggcaaa ggctttgttc
     2881 agtgcttcgc gcagttcgtt atcttcttta cgcaggccca tgccggtccc tacgccaaac
     2941 agtttttcat ctttaacaga cgggccaccg aatttgtaat ctttaccgac aggttgtttg
     3001 aggaaacctt cgctggcagc gacctcatcc tggaacgcgg catcaatacg tccggcagtc
     3061 aggtcagaat aaatgttgtc ctgcccctga tacgagacga tttcaatgcc ttttggtgcc
     3121 caatgttcat taccgaacgt ctcctgggtg gtgccctgca atacgcctac ccgtttgcct
     3181 ttcagcgact cgactgtcgg ctgaatgtca gaatttttcg ccaccaccaa acgagaatcg
     3241 gcagcgtaca gtttgtcggt gaaggctatt tcttgctgac gtttttccgt aatggaaagc
     3301 gatgacatga tggcgtcaat cttcttcgct tttaaggacg ggattaacgc atccagcgga
     3361 ttttcgacaa acgtacattg cgtattgatg cgtttgcata attcctttgc cagatcgata
     3421 tcgaagccaa ccagttcgcc ttgtgaattt tttgattcaa atggcgcata ggtcgggtcg
     3481 gtaccgatgc ggatgttttg cggaatcgca gcaaatgccg cagttgcgct ggagaaggcc
     3541 agaaccagag agagcgatag caccagtttt ttcataatgt cctcaactga cagtcttttt
     3601 atagggaata tttacaggtt tgttacactt atcgtgccat aaaattgacc atcaaggcaa
     3661 aatatcccgc cccgttagat gtattatttt tcattaaaaa tgcttaagta tgcatttcaa
     3721 tgcaccacga tagtgcaaca aacctagcgt gcaccatgat gatcattcca tcaggtacag
     3781 cttcccagcg acgtatcagt caccgtagac attaaagtcg aaatactttt tcgccatctt
     3841 gtcgtaggtg ccgtcctgac gcagctcgcc aagcgcctta ttgaaggcag ccgtcagttc
     3901 agcatcatct ttacgtagcc ctacaccggt gccatcaccg aagtattttt tgtcttttac
     3961 tgatgagcca gcaaaggcga aatctttacc agcaggttgc ttgaggaatc cttcgctggc
     4021 agcaacttca tcttgtaacg cagcatccag acgtcctgca gccagatcgg aatagaccaa
     4081 atcctggttg gcataggcca ccacatccac gcctttgcta cgccaggtct cgttagcgta
     4141 agcttcctgg gttgatccct gcagcacacc aacatgttta cctttcagtg aatccagcgt
     4201 tggctgaatc ggtgaacctt tggcagcaat caaacgagaa tctgcggcgt acagcttgtc
     4261 ggagaaggca atctcctgct gacgtttatc ggtaatggaa agcgacgaaa taatggcgtc
     4321 gatttttttc gctttcagtg aggggatcag cgcgtcaaag tcactggcaa cccaggtaca
     4381 tttcacctgc atccgtttgc acatctcgtt accgagatcg atatcaaagc caacaaaatc
     4441 acctttagca tctttcgacg agaacggcgc ataggtggta tcggttccga tacgtaccgt
     4501 ctccggtagc gccgcatagc tggaagccgc tacggagaga ccgactaaca aagacagagc
     4561 gagaatcgac ttcttcatac ataaccctca agtgaaaatg gcttttttat gttgtgtatt
     4621 gtgttgtgtg tttgcaggct ctttcatgca ggtcttatgc catcttgacg acaacagtaa
     4681 cattcaacgt taaatatgtt aataagacgt tgcattattg tcctgaagtt gaagatagca
     4741 ggtatagcgg ttgaatcgca gcgtttcgat tgaatggcag aaacaaaatg tcgaggattt
     4801 gatcgcggtt gcaaaattgc cctgaaacag ggcaacagcg gagttatgcg ccctgccagc
     4861 gggcaaagag atcttcagga aggcttattg caaactggtc aagaacacga ttaaccgtct
     4921 gatttatcac atcatcaagg gattgcgggc gatgataaaa cgccggaaca ggaggcataa
     4981 tcaccgcacc gatttctgcc gcctgagtca ttaaacgcag atggcctaag tgcaatggtg
     5041 tttcacgcac gcagagcacc aacgggcgac gctctttcag caccacatct gccgcacggg
     5101 tcagtaagcc atcagtatag ctatggacaa tgccggaaag ggttttgatt gaacagggta
     5161 aaatcaccat ccccagcgtc tggaaagaac cggaagagat gctggcggaa atatcgcgcg
     5221 catcgtgcgt gacatcagct aatgcctgca cttcgcgcag ggaaaaatcc gtttcgaggg
     5281 ataaggtctg gcgcgccgcc tggctcatca ccagatgcgt ttcgatatct gtgacatcgc
     5341 gcagaacctg taataagcgc acgccataaa tcgcgccgct ggcaccgctg atgcctacaa
     5401 tgagtcgttt cataaatagt tgccctgtca gacttgcagg cagactttgc agtatttcgg
     5461 cgggagttgc aagtcagggt gccagaccgg caccctcagc gaaggcatca tccttcgtta
     5521 tgcatttcga gattttccac ttcgttctga cgttgcactg ctttggcgtc atcattacgt
     5581 aacgtatcga ggaaatcgag gtagtcctga tcaacatctt tggtgacgta gacgccgttg
     5641 aacaccgagc attcaaactg ctggatatcc ggattttcag cgcgaacggc gtcgatcaga
     5701 tcgttcagat cctggaaaat caacccgtca gcaccgatga tctggcgaat ttcatcaact
     5761 tcgcgaccgt gagcgatcag ttccgtggcg ctcggcatat caataccata aacgttcggg
     5821 aagcgaattt ccggggccgc agaagcgagg tacactttct tcgctccggc ttcgcgtgcc
     5881 atctcgataa tctgctcaga agtggtgcca cggacgatgg agtcgtcgac cagcaggacg
     5941 tttttatcgc ggaactcggc gcggttggcg ttcagtttac ggcgcacgga cttacgacgc
     6001 agctgctggc ccggcatgat gaaggtgcgg ccaacatagc ggtttttaac gaagccctgg
     6061 cggtacggct tgcccagaat acgagcaatt tccagcgcga tatcacacga ggtttccggg
     6121 atcgggatca ccacgtcgat atccagatct tcccattcgc gggcaatttt ctcacccagt
     6181 ttcgtgccca tattcacacg cgcgctgtaa acggaaattt tgtcgataaa cgagtccggg
     6241 cgggcaaagt atacatactc aaacaggcac ggattgctga ccggattgtc agcacattga
     6301 cgggtaaaca actgcccttc ttcagtgatg taaatcgctt cgcccggcgc gacgtcacgc
     6361 aggaaatcaa agcccagcgt atcgagcgct acgctttcgg aagcgaccat atattctgta
     6421 cggttctcgt caatatcacg ttttcccagt accagcggac gaatcccgtt tggatcgcgg
     6481 aaagcaacca taccgtggcc gataatcatc gccacacagg catatgcgcc gcggattaag
     6541 cggtttgtgg cagcaatggc agcgaaaata ttgtcggctt ccagcgggta gtggcggaag
     6601 ttgtccagct cgctagcgaa gatattaagc agaatttccg agtcggaagt ggtgttgatg
     6661 tggcggcgtt tttcttcaaa cagtttttta cgcaactcgt gagcgttggt cagattgccg
     6721 ttgtgggcaa gcgtaatgcc atacggggag ttaacgtaaa acggctgcgc ttcagaggcg
     6781 ctggagctgc cagccgtagg gtaacgcaca tgaccaatgc ccatattgcc ctgcaaacgc
     6841 tgcatatggc gagcttcaaa tacatcgctc accagcccgt tcgctttacg caaacggaag
     6901 cagttattgg catctatggt gatgatgccg gcggcatcct gaccgcgatg ctgaagcacc
     6961 gttaaggcat cataaatcga ctggttaacc ggcataacac cggcgatacc gacaataccg
     7021 cacatacgtc tttttcctcg ttaagccaca tctcagagca cttacgctct gggcaagaaa
     7081 cttgacgagc tttgcagata atcaaaaaac catctgatga taaaactgaa ctgcgggatc
     7141 agctgtgatt tgctccagtc ttcgcttttc gacaccccgg taaaggagtc gagaaagaag
     7201 agaatggcgg caacaatcaa cacaccgcgc aacgcaccga aacagacgcc cagcacccga
     7261 tcggtgcctg acaaccccgt tttctccacc aactggccta tcacgaagtt cacgatagca
     7321 ccaacgatca gggtagcgat aaacagtacc gcgatggcaa ttccatttcg aaccagttcg
     7381 tcttcaaagc ccgtaaacca gactgacagg taagtgtagt aatgactggc aacaaagaaa
     7441 gcacaacccc atgtcaccag cgataacgct tcacgaacaa agccgcggat caggctaacc
     7501 agagaggaaa aagcaatcac cgcgattatg gcgtaatcaa tccagaccat atgtgtccca
     7561 cgattttacg ccctgtcatc ctgttcgggg cgcattctaa cagaaaaaga aaacgtttgc
     7621 gtagggattt ccttcccacg catcaataaa aatggcgctg aaaaaatatt caacgccatc
     7681 gactttttat gcctttgcgg catcgtgcaa tgcgtgtcgg atgcggcgta aacgccttat
     7741 ccgacctacg gttctaacac tgcccaagcc tgataagacg cgccagcgtc gcatcaggca
     7801 agactgtatt aattcggcgt atagcccatt accacgccac ttaagccaga aagttgcttc
     7861 aactcaccca gcgaaccttt cagcttatct ttcgaggcat ccggcccaac cagaatacgg
     7921 gtaattttac cctgcactgg cgtggatggc gacgtataaa cccgataacc ggcaccgcgc
     7981 agcttaccga caatctcatt cactttatcg gcatttttca gcgcacccag ttgcacaaca
     8041 taggctttac ccgttggcgc tgctttttct tccacgaccg gcttcggttc tggcttcggc
     8101 gcaggtggtg cttcaacctt cggtttaggc ggctccaccg gtttcggctt cggtggggcg
     8161 accggtgcag gttccggttc aaactcggtg ttattggctg caatagtggc cggatcgagc
     8221 gacggtgctg cggcatcacc tgcccgcacc tcttccgctg cgccttccgg cggctgcgtc
     8281 ggcaacgcct gggtggcggc tggcatcata tcaggctcat cgcgatcgcc cgcttttgga
     8341 accagcggga tagccgcaaa ctcatcctga taatgttttt tctgcccgtc cagcagccct
     8401 ggaagtacaa tcacccccag cgccaccagc acgatcgtgc ccactaaccg attctgaaac
     8461 ttacttgcca ccgcttctcc tcgcgtcaat cacttccatg acatgtgcga ccgtgtggaa
     8521 agaaccacac accagcacgg tgtcttccgc tttagcgtcc gccattgcgg catcccatgc
     8581 ctgcgcaacg ctatcaaatg atttgccgtt acccaaatgc tcaagcagtt gttctgccgt
     8641 ggcaccgcgc ggcccttcca gtggcgcaca ataccagtca tcaaccacgc ttttcaacca
     8701 ggccagagtt ccggcaatat ctttatcatg tagcataccg ataaccgcca gcacgcgccc
     8761 gtttttcggt agcgctttca tacgcccggt gagatattcc gccgcatgtg gattatgcgc
     8821 gacatcaaaa ataacgcgtg gcgactcgct cacaatctgg aaacgtcccg gcaaaattgc
     8881 gctggcaatc ccgtcgcgaa tggcattttc actgacttcc agcccgctgg cacgcagtgc
     8941 cgccagcgct gttgcggcat tcggttgcgg gacaagcggc aacggcagat tttccagcgt
     9001 gccgtgagca tcgctaaacg cccagtcatg atcggtgacg gaatagttcc actcaacgcc
     9061 ccgacgttgt aacagtgcac ctttttcctg cgccacatca gcaatggtag aaggcatttc
     9121 cggctcaccg acaattgccg gttttgcgct gcgaaagatg cctgctttct cgcgaccaat
     9181 actttcgcga tctggcccca gccagtcggt atgatccagc gcaatactgg ttactaccgc
     9241 gacatcggca tcgacaatat tggttgcgtc cagacgaccg cccagcccta cttccagaat
     9301 caccacgtca agttgtgcct gtttgaacag ccacaacgcc gacagcgtac cgtactcgaa
     9361 ataggtcagg gaaatatcac cgcgtgccga ttcaatctcc gcaaaagagg cggtgtgggc
     9421 cgattccggc aattcctgac cctgcacacg tacgcgctcg gtataacgca ccagatgcgg
     9481 cgaactgtag acgcccactt tgtaccctgc cgccatcaga atcgactcca gcgtacggca
     9541 ggtggtgcct ttgccattcg tacccgcaac ggtaaacaca aatggcgctg gtttcagaac
     9601 gccaagacga gccgcgacct ggctcacgcg ctcaaggccg agatcgatag ttttactgtg
     9661 caggttttcc agataagaaa gccacgaagc cagaggcgac gcggcttgag gagtgcgttt
     9721 gataatcatg gtatccgctg attcgttacg gtgagaatag caaaagggca gagccagtgg
     9781 ccctgccctt atcagttatc aggcctcagg ttcctgatcc ggtaccgggg gtaccactac
     9841 gccttcacgc ggcgcttcag gattcggcgc tggcagattc atcaacttcg ccagaatgct
     9901 cgccagtttc aggcgcattt ccggacgacg gacgatcatg tcgatcgagc ctttctcgat
     9961 caggaattca ctgcgctgga atcctagcgg cagtttttcg cgaacggtct gttcgataac
    10021 acgcggaccg gcaaagccaa ttaacgcttt cggttcagcg atgttgagat cgcccagcat
    10081 ggcgaaactt gcagaaacac cgcccatcgt cgggtcggtc agcacggaga tgtacggcaa
    10141 gccgcgctcc tgcatttttg ccagtgccgc agaggttttc gccatctgca tcagcgacat
    10201 cagtgcttcc tgcatacgtg cgccaccaga ggcggagaag cagatcagcg ggcagttatc
    10261 ttccagcgcc tgctcaacgg cacgcacgaa acgtgcaccc acaacagacc ccattgaacc
    10321 gcccataaag gcgaactcga atgccgcagc gacaaccggc attccataca gagtgccttt
    10381 catcaccacc agcgcatctt tttcgccggt ttctttctgc gcagaagcca gacggtcttt
    10441 atacttcttg gagtcacgaa acttcagcac atctttcggc tcaagctcgc tacccatctc
    10501 cacaaggctt ccttcatcta acaggctatg caggcgatta cgcgctgtca tacgcatgtg
    10561 atggtcacac ttcggacaga cctcaagatt acgttccagc tcagcgcggt ataaaacctg
    10621 accgcagcta tcacacttag tccacacccc ttcaggaatg ctcgccttgc gggtgggagt
    10681 aatgttgctt ttaattcgtt caatccagct cattagggac ctttctgtct gaacctggtt
    10741 cgatgccagt tttatctttg gggacgcata atgccatttt tgcccccaac agaccatgaa
    10801 tgttgcacat taaaacataa cagcccgaaa ctttggataa aaaagtggtc gaaccgcgga
    10861 gttacttttt attttgcggc gcgtgccgca gcgcgtttgt gacgaataaa ttcgaaaacc
    10921 ccaggcaata ttgaaacaaa aataatgcca acaatcatca gcttaaggtt gctctgaatg
    10981 aaggggagca tgccgaagaa ataacccgcg taggtaaaaa tcagtaccca caacagtgcg
    11041 ccgatcacgt tataagcggc gaaatgacgg tacgacatgt ggcccattcc cgcaacaaac
    11101 ggcgcgaacg ttctgacgat cggtacaaaa cgggcgagaa taatcgtttt gccgccatgt
    11161 ctctcgtaaa actgatgagt cttatcaaga taactgcaac gaaagatttt cgaatccggg
    11221 ttactgaaca gtttgtcacc aaataaccgt ccaatggtat agttcactgc atcaccgaca
    11281 atagcggcaa tcaacataag caccaccatc atatggacat tgagatcgtt agtttccagc
    11341 gacgccaatg caccagcaac aaacagcagc gaatcaccag gcaggaatgg cgttaccacc
    11401 agccccgttt cgcagaacag aatcaaaaac agaatggcat aaacccagac gccgtactcc
    11461 gcgaccagct ctgccagatg cacgtcaatg tgcaggataa aatcgatgag gaaataaatc
    11521 aggtccatat ttgcctatgc cttgtactcg tcatctttca ggctgtaact acgttggcta
    11581 cagcctgaaa tgttccgagc attattctcg ttagtccgcc agaaatagcg ggcccattgg
    11641 cggttttgga agatcatacc ggtcagggta atccaccgcg accagataca gcccttccgc
    11701 ttttgccgtt gctgccgcca gcgttctgtc ctttgccgcc agcaactctg ctatccagct
    11761 ctccggctgg ttgtgggcac cgacttccat caggctgccg acaatattcc tgaccatatg
    11821 atgtacaaag gcattcgctt tgatatctac caccacataa ggaccgtgac gcgtgacatt
    11881 aatatgcata acgttgcgcc acggggttcg ggactggcac tgcaccgcac ggaacgaggt
    11941 gaaatcattc tcgcccagca agcattgcgc agcccgatgc atccgttcag cgtccagcgg
    12001 ttcgtaaaaa tgggttaccc ctttactcag taccgccggg cgcagccgat gattgtagat
    12061 gatgtagcga taacggcgag ccgtggcgct aaatcgggca tgaaaatcat caggtacagc
    12121 tttaacccaa cgcacggcga tgtcatcagg taaattcgca tttacgccca aggtccacgc
    12181 cgcgtctttg cgctgcgcgg ttgtttcgaa atgcaccacc tgcccggtac cgtgtacccc
    12241 tgcgtcagta cgcccggcgc agaagacggt gatgggttcg ttcgccacct gggagagcgc
    12301 cttttccagc ttctcctgca cactgcggac ttcattctgc cgttgccagc cgtaatactt
    12361 actgccgtcg tactcaatgc ccagcgcaat tttataaact ggcagttgtt gctggtcgga
    12421 cattagtaca gatactcctg caccagtttc tcggcgattt ttactgccat cagcgcgccg
    12481 ccaaagcgaa cgttatcggc caccgaccag aactggactt gctccggcat accgtagtca
    12541 ttacgcacgc agccaacaga aagatgcgga gtacccgaag catcccctac ctgagtcggg
    12601 aattcgttct cttcagagag cacaatatct tcgccctgag caaacgcatc acgcgcttct
    12661 tctgccgcca gcggacgcag tgcttcaaag ttgaccatct gggcatgacc gtagaatacc
    12721 ggtgcctgga cgacgcttgc cgaaatcatc agcccttcgt cctgcaggat tttgcgtact
    12781 tcgtcaacga tacgacgttc ttcacgcacg ctaccttcgc tatccggcaa caacggcagc
    12841 atattgaacg ccagttgacg accgaagaaa tcttcttcgt caatcggaat gccgttgagc
    12901 aatttcgcac tctgccccgc taacgcatcg accgcttttt tgccctgggc ggaggctgaa
    12961 atcaggctgg taacactgat acgcgacaaa ccgccctgat cgattaacgg tttcagtgcc
    13021 gccagcagct ggctggtcag actgtctggt acggcgatga cattccggtt gcggtaatcg
    13081 gtcagtacaa acgggtttac ttccggcacc accagcggta cgtcgggttc gagagcaaac
    13141 agtccgctgc tgtcgatcac caggcaacct gagttggtcg cttcttcaac ccaggcagcg
    13201 gtagcttctt tgcctgcgac aaaaaatgcc agctgcgcct gcgtccagtc gaattcagcg
    13261 gcatcctgca cggtgattgt tttaccacca aagcgcagtt gttcgcctgc gctttcgtta
    13321 cgtgccagtg cataaatttc cccaaccggg aactgacgtt cagccagcgt ttcaagcagg
    13381 gcttcgccca cagcgccagt tgcgcccagg acggcaatgt tccagccttc agacatggtg
    13441 gtttactcca gaaatagcaa agctccctgc caatgttaca gcagagagca tgaagaagag
    13501 attaacgtgc cggatgatga acggcgttaa aacccagttt acacagcaat gatgccgcac
    13561 tggcgtcatc acaaattaca tacagagatg accattcacg gcgctcaaga tagtttttgc
    13621 gcagtttatc gaactcaccc ggtatcccgg cgactttacg cagcggtgcg tcatcgcggc
    13681 gcacatcata caccaaatgc accagccttt tcagcgtcgg ttgatcgagc gggccatgca
    13741 gcgtaatgcg accaaactct ggcgcgggca gtaatgtatc cagcgcaacg tgctgttcat
    13801 gcccaataaa cttgctataa gcttcaaaca cttgcgtagt accgcgtgct ttaccttcca
    13861 gggtataacc tgcgatatgc ggcgtgccga tatccacttt tgtcagcaac tccacgttaa
    13921 gttccggttc gccttcccag acatccagca ctacgcttaa cttctggcct tcattcaggc
    13981 aggtcagcaa cgcagtatta tcgacgactg cgccacggca ggcgttaatc agaatcgctc
    14041 ccggcttcag gctacggatc agtttttcat ccgccagatg cagcgttttg tacggcccat
    14101 ctttgaagag tggcgtatgg aaagtcagaa tatccgcatg ctgaactaat tcatccagcg
    14161 agcggaaatc accctcatcc ccacggtcag cgcgaggcgg atcgcaaagc aatgttttaa
    14221 tccctaacgc ttccagtcgc gcctgcaatc gacgtccaac gttaccaacg cccacgatcc
    14281 ccaccgtacg gtcgtgcagt gaaaatccat cgcgttcggc aagcatcagt agtgaggaga
    14341 aaacatattc caccaccgca atcgcattac agccaggtgc agcggaaaaa ccaattcccg
    14401 cctgcttcaa ccatgcttca tcgacatggt cggtccccgc agtggcagtg ccaacaaatt
    14461 taatgggttt tcctgccagc aaagattcat tcactttcgt gaccgaacgc accatcagcg
    14521 catccgcgtc tgccagttga gcgacggcga ttggacgccc gggaaccgcg gtcacctcac
    14581 ccaaacggct aaataagtcg cgggcataag gcatattttc atcaacaagg attttcacgt
    14641 ttgtgttacc tgtatgagac gagagttaac cggacaagtg tgccataatc tcgcggccag
    14701 gcatacttgc gaagatttca ggtataagga tacgtaatga tacaacctat ttccggccct
    14761 cctcctgggc aaccaccagg tcagggagat aacctgccgt ctggcgcggg caatcagcct
    14821 ttatccagtc agcaacgtac ttcgctggaa agcttaatga cgaaagtgac ctcactgacg
    14881 caacagcaaa gagcagaact gtgggcgggt atcaggcacg atattggtct gtcgggagat
    14941 tcaccgctgc tttcgcgtca cttccctgcc gctgagcata atctggcgca acgtctgctg
    15001 gccgcgcaaa aaagccattc tgcccgccag cttttagcgc aattagggga gtatttacgt
    15061 ctggggaata atcgtcaggc ggtcacggat tatatccgtc ataactttgg tcagacgccg
    15121 ctgaatcagc tctcaccgga gcaattaaaa accattctca ccctgttgca ggaagggaag
    15181 atggttattc cgcaaccgca gcagcgcgag gcgaccgacc gtcctttatt accggcggag
    15241 cacaatgcgc taaaacagct ggtgaccaaa cttgcggcgg caacggggga acccagcaaa
    15301 cagatctggc aatcgatgct ggaactttcc ggggtgaaag atggcgagtt aattccagcg
    15361 aaactgttta accatctggt gacctggcta caggcgcgtc agacgctaag ccagcaaaat
    15421 acgccgacgc tggaatcact acagatggcg ctaaaacaac ctttagatgc cagtgaactg
    15481 gcggcgttat cggcatatat ccagcaaaaa tatggccttt ctgcgcaatc atcgctttct
    15541 tctgcccagg ccgaggatat tcttaatcag ctttatcaac ggcgggttaa agggattgat
    15601 ccgcgtgata tgcaaccgct gcttaatcct tttccaccga tgatggacac gttgcaaaat
    15661 atggcaacgc gtcccgcgct gtggatactg ttagtcgcga ttatcctgat gctggtctgg
    15721 ctggttcgtt aaccccgacg aaatgacagt atcgtgacaa taatacccag caccgcagag
    15781 atcgccccgg caagaaatac cgaagagtaa ccaaacgtgg tcgccagcat tcccgccagc
    15841 ggcccggaga cgccgagggc gatatcctga aacgcggcgt aaccgcccag tgcggtgccg
    15901 cgaacttgtg aggggacgcg tttaaccacc tccacgccca gcgcaggaaa gataagcgaa
    15961 catccggctc cggttaacgc cgcgcccgct aatgcgaccc atgcacctgg ggcttgccag
    16021 agcagcaaca agcccaccgt ttctacaagc agagagacaa tcgccacttt cacgccgcca
    16081 aaacggtccg gcatccagcc aaacatgacg cgcatcacga caaatgcgcc gccaaacgcg
    16141 gtaagagtaa agcccgccat cgcccatcct ttgctggcaa agtagagcga aacgaaagtc
    16201 ccgataaccg caaaaccaac gccttgtagt gccagcccta accctggttt ccagataagc
    16261 ccgacaacgc tccacagcga tggacgttct cccgccaggg ccggtacttt gcgcactgtg
    16321 ccgttacagg cccacgccag taagggtaat accattgtgg tgatcgccag tgcggcaaaa
    16381 ccgtaatggc tatgaatcaa caggccaagc ggcgcaccaa cagcgagggc accgtaaatc
    16441 gccattccgt tccatgacat cactttgcca gagtgttttg cccctacgat gcctaatccc
    16501 caggtcagag cgcctgtcag taactggctt tcaccaaagc caagaatcaa acgcccgacg
    16561 accaacaggg caaatttcaa cggtgcggag acaggcaaaa tcgccgccag cagcaacgcg
    16621 ccgccagcca gaccacaagc taacatcccc tgaagcgccg aacgttttgc accatattga
    16681 tcggccagtc gcccggcata gccacgcgtc agcaccgtag ccagaaactg aatcccgacg
    16741 gcaatcccga ccatggtatt gccatagccc agatcatgat gaacaaacag cgggataacc
    16801 ggcaacggca gccctacggt catgtaggtg agaaaaaccg caaaagcgat gcggaagagc
    16861 gaaaaattgg cagaagatcg tgtttcggtt tggcttacag cagtcatgca ttactccaga
    16921 atgcagcgca aggcgaggag tatccccgtc tcatctctct ggtttcaggg ttacagtgcg
    16981 ttggcaggat ttaacgcgta cgtcttttca gaaggaaatc gacaaagcgg gaagtttgcc
    17041 tggaactggc ggcgattgtc aatgatgtga aaaagggaac catcaggttc ccttttgcgt
    17101 tagtgccgga ggccgcattg gcgcgtaacg tcggatgcga cgctggcgcg tcttatccga
    17161 cctactccga ctactccgac tactccgact actccgacta ctccgactac tccgacctac
    17221 tgcgaattaa tctttcagct tgcgcattac cagcgtggcg ttggtgccgc cgaagccgaa
    17281 gctgttagac ataacggtgg tcagttcgcg atcggtcgtt tcggtcacga tgttcagacc
    17341 tgccgcctgc tcgtccagct cttcaatgtt gatgctcggg gcgataaagc cgtgttccag
    17401 catcagcaga gagtagatag cttcctgtac gccagcagcg cccagagagt gaccggtcat
    17461 ggctttggtt gcagaaatcg ccgggctctt atcgccgaac acttcacgga tagctgccag
    17521 ttctttcacg tcgccaaccg gagtcgaagt accatgagag ttcaggtaat cgattggggt
    17581 atcaacgccg tgcatcgcca tcttcatgca gcgtactgcg ccttcgccag acggagcaac
    17641 catgtctgca ccatcagagg ttgcgccgta gccaacgatt tcagcataga tgtgagcacc
    17701 acgcgccagc gcgtgttcca gctcttcaac cactaccata ccgccgccgc cagcgataac
    17761 gaaaccgtca cggtgagcgt cgtaagtacg ggaggctttt tccggggtgt cgttgtattt
    17821 agtagacagc gcacccatcg cgtcgaattc gcaggccatt tcccagcaca gctcttcgcc
    17881 gccgccagca aacacgatgt cctgtttgcc cagttggatc tgctctactg cgttaccgat
    17941 acagtgtgcg gaagtcgcac acgcggagct gatggagtag ttaacgccat gaattttaaa
    18001 cggcgtggcg aggcaggcag aaacgccgga tgccatcgct ttggtgacca catacgggcc
    18061 aaccgctttc aggccgcgcg ggccgcgcat tgcgtcagcg ccgaatacct ggaaacgcgg
    18121 ggaaccgccg ccagaacctg caatcaggcc aacgcgcggg ttattctggt aagcttccgg
    18181 agaaaggccc gcatctgcga ttgcctgctc catagaaagg aatgcataaa tggatgcgtc
    18241 gctcataaag cgcacaactt tgcggtcaat gaggccagtg gtatccagtt ttacgttgcc
    18301 ccagacgtgg ctacgcatgc cggaatcctt aagctcctga gagaaagtga tccctgaacg
    18361 tccttcacgc agagatgcca ggacttcctg ctggttatta ccgatgctgg aaacaatgcc
    18421 caggccagta atcactgcac gtttcattca atacctctgt aagtcgcaca tagagtaagt
    18481 ttcgaatgca caatagcgta cacttgtacg ccgaacaagt ccgatcagcc atttaataga
    18541 gaaatttgcg cagccttaca cacatcgcta agatcgagcc accgcctgta agacgagtaa
    18601 cttacgtgaa acactactcc atacaacctg ccaacctcga atttaatgct gagggtacac
    18661 ctgtttcccg agattttgac gatgtctatt tttccaacga taacgggctg gaagagacgc
    18721 gttatgtttt tctgggaggc aaccaattag aggtacgctt tcctgagcat ccacatcctc
    18781 tgtttgtggt agcagagagc ggcttcggca ccggattaaa cttcctgacg ctatggcagg
    18841 catttgatca gtttcgcgaa gcgcatccgc aagcgcaatt acaacgctta catttcatta
    18901 gttttgagaa atttcccctc acccgtgcgg atttagcctt agcgcatcaa cactggccgg
    18961 aactggctcc gtgggcagaa caacttcagg cgcagtggcc aatgcccttg cccggttgcc
    19021 atcgtttatt gctcgatgaa ggccgcgtga cgctggattt atggtttggc gatattaacg
    19081 aactgaccag ccaacaggac gattcgctaa atcaaaaagt agatgcctgg tttctggacg
    19141 gctttgcgcc agcgaaaaac ccggatatgt ggacgcaaaa tctgtttaac gccatggcaa
    19201 ggttggcgcg tccgggcggc acgctggcga catttacgtc tgccggtttt gtccgccgcg
    19261 gtttgcagga cgccggattc acgatgcaaa aacgtaaggg ctttgggcgc aaacgggaaa
    19321 tgctttgcgg ggtgatggaa cagacattac cgctcccctg ctccgcgccg tggtttaacc
    19381 gcacgggcag cagcaaacgg gaagcggcga ttatcggcgg tggtattgcc tgcgcgttgt
    19441 tgtcgctggc gctattacgg cgcggctggc aggtaacgct ttattgcgcg gatgaggccc
    19501 ccgcactggg tgcttccggc aatcgccagg gggcgctgta tccgttatta agcaaacacg
    19561 atgaggcgct aaaccgcttt ttctctaatg cgtttacttt tgctcgtcgg ttttacgacc
    19621 aattacccgt taaatttgat catgactggt gcggcgtcac gcagttaggc tgggatgaga
    19681 aaagccagca taaaatcgca cagatgttgt caatggattt acccgcagaa ctggctgtag
    19741 ccgttgaggc aaatgcggtt gaacaaatta cgggcgttgc gacaaattgc agcggcatta
    19801 cttatccgca aggtggttgg ctgtgcccag cagaactgac ccgtaatgtg ctggaactgg
    19861 cgcaacagca gggtttgcag atttattatc aatatcagtt acagaattta tcccgtaagg
    19921 atgactgttg gttgttgaat tttgcaggag atcagcaagc aacacacagc gtagtggtac
    19981 tggcgaacgg gcatcaaatc agccgattca gccaaacgtc gactctcccg gtgtattcgg
    20041 ttgccgggca ggtcagccat attccgacaa cgccggaatt ggcagagctg aagcaggtgc
    20101 tgtgctatga cggttatctc acgccacaaa atccggcgaa tcaacatcat tgtattggtg
    20161 ccagttatca tcgcggcagc gaagatacgg cgtacagtga ggacgatcag cagcagaatc
    20221 gccagcggtt gattgattgt ttcccgcagg cacagtgggc aaaagaggtt gatgtcagtg
    20281 ataaagaggc gcgctgcggt gtgcgttgtg ccacccgcga tcatctgcca atggtaggca
    20341 atgttcccga ttatgaggca acactcgtgg aatatgcgtc gttggcggag cagaaagatg
    20401 aggcggtaag cgcgccggtt tttgacgatc tctttatgtt tgcggcttta ggttctcgcg
    20461 gtttgtgttc tgccccgctg tgtgccgaga ttctggcggc gcagatgagc gacgaaccga
    20521 ttccgatgga tgccagtacg ctggcggcgt taaacccgaa tcggttatgg gtgcggaaat
    20581 tgttgaaggg taaagcggtt aaggcggggt aatctgctct cgcagtgttt gccggatgcg
    20641 gcgtgaacgc cttatccgac ctacgtgtga cgtgtaggcc tgataagacg cgataagcgt
    20701 cgcatcaggc atggtgctcc agacgccgca acttactgct gtgacgcctg ctgaaacagg
    20761 ttttcccaca tatcggtcac cagcgcctgg tcacgcggcg acaattcacc ggcaccaatg
    20821 gctttttcca gactctggct aacggtcgta tgcaccgcct gagcggagtg gtcatcacca
    20881 ctttccagtt ctgcgatggc taatgtcagg tggccacgca aatacccact ggcaaacaac
    20941 tcatcatcac tggcatggtc aatcatgccg tcgattaatg ccagaatgcg tgattcaaac
    21001 tccgcgatca tcttctttcc tcattgtaaa acgtggcacc ggcttcagtt gagcgcttcc
    21061 ggccacggga actgttccgc cgtaagttcc ggcgtgtgat aataattttg tagtgcttta
    21121 atgaagcgtg ccggacgctc gggaatgcca tttgtcagat aatccatcac ctgcgcatgt
    21181 acccgccgtt gaaacaccac acgatccggt tcgaagtcgc cttccagatt gtcgcaactg
    21241 acgttaaacg gatatcccgc cgccacacag aacaaccagt cgagtgcctg cggcttcact
    21301 tcaacatctt caaactggct ttgcgtttgg gcatcacgcc catccgggca ataccagtag
    21361 ccgaaatcaa ccagctcacg gcgcgctttt ccggcaatac accagtgcga aatctcatga
    21421 attgcgctgg cataaaagcc gtgggcaaag acaattcggt tatacggtac ttccgcatca
    21481 gcaggaagat agatcggttc gtcgtcgcct ttaatcagac gggtattaaa ttcatcggca
    21541 aagcagctat taaaaatttc aatcaactgc tcatagtggt gtgtactgtt cattagttca
    21601 tccccaacca gtggaggatc tcctgtccgt ggctatcgta aagtaatttg gcactcatca
    21661 ccgccgagac gataacgatc atcgggcgga tcagtttttg tcctttgctc agcaccagtc
    21721 ttgaacccat gcgcgcgccg aggaactgcc ccaccagcat gacaaagccc gtcgcccaaa
    21781 tcactttgcc gccgagaata aacagcagca gaccgccaat gtttgacgtt gcgttgagta
    21841 atttggcgtg agccgtggct ttggcgaggt tgaatccgca cagcgtaacg aaggccagcg
    21901 cgtaaaacga tccggcagcc gggccaaaga atccgtcata aaaaccgacg cagccaccgg
    21961 caattaacgc gaagggtaaa ccgtacatcc ggcgctggcg atcttcttca cccagctttg
    22021 gcatcagcaa gaaatagagg ccgatacaaa ttaccagaat gggcaaaatc tgccgtaaga
    22081 catcagcctg aacgtattgc accagcagtg cgccgctcat tgagccggca aaggtcatgg
    22141 cgatattgag tttctgatcg cttaaactaa ccactttgcg gcgaataaag tagatagtgg
    22201 cggaaataga gccgccgcag gcttgcagtt tattggttgc cagcgcgtta gcgggagaca
    22261 ttcccgcagc catcaatgcc ggaatggtga gtaacccacc gccaccggca atcgagtcga
    22321 taaatcccgc cagcatggcg acaaaaaaga gaactcccag caacagcggg gaaaccataa
    22381 acaggctatt aaacgtttcc attagatcac gtgctcatcc agtagcgcct ggcaggaagg
    22441 cggcaacgga ggcggtgtct tcttctcagg ctttgttgtt cctggttttg gaggtgcaaa
    22501 ccagctttgc agttctgccc cgcaaccatc gcctggtggc ggtaaaggtt gatcttcaca
    22561 ctccagacta tcggcagggc aacgtaatcg tacatgcata tgcgcgcgat gctggaacca
    22621 gggtcgcact ttgcgcaacc agtcgcgatc ggtgcccgca tcaaggcaaa gttgttgttt
    22681 aatcgccgga ttaacaaaaa tgcgcgtgac gtctttgtcc tgggcggcga gtttgatcaa
    22741 gctgaaaatt tctggcttcc acagcgtgga gacaacgtgt ttaccgtcgc gggaaactaa
    22801 gtccagtgct tgcgggcgca agagctgcgc ggaggtccag cgagttttcg gcagttgcag
    22861 aaagatatcg acatccagtc cggtctggtg gctggcatga ccgccgttga aacgcccacc
    22921 agcgggcatc cccatatcgc caatcagcac cgtacccatg cccagattgc tcacctggct
    22981 actcagacgc tggataaaca tcaccagatc cgggtgaccg aaatagcgac gctgatcggt
    23041 acgcatgacc tgataatgtt cggactgtat cggcaacgtg tcagcgccga caatacagcc
    23101 attagaaaaa ctgcctatcg attgtgcgct acccggcaca ggttgggtta ttttttgcca
    23161 cggcgtcgct gccaagctag cgctactggc aagcagagcc agcagcgcaa tcgcggtttt
    23221 gttcattttt taccagcgtg gaatatcagt cttcacatcg gcattttgcg cccgctgccg
    23281 taacaggtga tccattaaaa cgatcgccag catcgcttca gcgatcggca ctgcacggat
    23341 cccgacacag ggatcgtgac gacctttggt gatcatctca acttcttcgc caaagcggtt
    23401 aatagtgcgc cccggcacgg taatgctgga ggtcggtttc agcgccatat gagcaatgat
    23461 ttgctgcccg ctgctgatac cgccgagaat gccgcccgca tggttgctct ggaaaccgtc
    23521 tttggtgatt tcgtcgcggt tctggctgcc gcgcagcgcc actacgtcaa agccgtcgcc
    23581 aatttccacg cctttcaccg cgttgatgct catcagcgca tgggcgatgt cggcatccag
    23641 gcggtcaaat accggctcgc caagtccggc ggggacgcca ctggcaacaa cggtgacttt
    23701 cgcgccgatg gagtcgccct cttttttcag cgcgcgcatc agttcatcta acgcgtcgat
    23761 tttgtccgga tccgggcaga agaacggatt ttgttcaacc agcgaccagt ctttgatttc
    23821 cagcggaatg tcgcccatct gggtcaagca gccgcggatt tcaataccaa atttctcggc
    23881 gagatatttt ttggcaatcg cccctgccgc cacgcgcatg gcggtttcgc gggcggaaga
    23941 acgtccaccg ccgcgataat cgcgcagacc gtatttttgt tcgtaggtgt aatcagcatg
    24001 gcctgggcgg aaaacgtctt taattgcgct gtaatcctga gagcgctggt cagtgttttc
    24061 gatcaacaag ccaatgctgg tgccagtagt aacgccttca aaaacaccag agagaatttt
    24121 gacctgatcc ggctcgcggc gctgggtggt atagcgcgat gtcccagggc gacgacggtc
    24181 gaggtcatgt tgcaggtccg cttccgtcag cagaatgcct ggcggaacac catcgacgat
    24241 gcagccgagc gccagcccat gcgattcgcc gaaggtggtt acgcgaaaga gttgtccaat
    24301 tgtgtttcca gccatcacgg ctccgttatt gttgtgtttg cgtgtttact taatctttat
    24361 aaatcgcgaa atattcacgg gccgccagca gctgctcttt ggtgagcata aacacaccat
    24421 cgccgccgtt atcaaactcc agccaggtga acggaacatc cggatattgt tccataagat
    24481 gtaccatgct gttgccgact tcacaaatca acacgccatc atcagcaagg taatctgccg
    24541 cgtttccaag aatgcgacgc gtcagtttaa ggccgtcggt gccagatgcc aggcccagtt
    24601 ccggctcgtg acggtattcg tttggcaggt cggacatatc ttccgcgtcg acatacggcg
    24661 ggttagtgac aatcagatcg tactgcactt tcggcaagtc gcggaacaga tcggaacgaa
    24721 tcggaatgac gttgtggatc agaccgtgtt cttcgatgtt ctgttcagca accgccagcg
    24781 cgtcgggaga gatatccacc gcgtcgactt ctgcatccgg gaaggcataa gcacaggcaa
    24841 tggcgatgca gccgctaccg gtacacatat ctaaaatatg ctgcggttgt ttgctgatga
    24901 gtccggcaaa tttattgttg atcagttcac caatcggcga gcgcggcacc agcacgcgtt
    24961 catcgacgta aaattcatga ccgcagaacc aggctttgtt ggtcaggtaa gccaccggaa
    25021 tgcgctcgtt gacgcggcgg atcacgcgtt caacaatacg atgtttttcg ctggaggtca
    25081 gacgcgcggt gcgcatatct tccgggatat ccagcggcag gtagagcgat ggtaacacca
    25141 gctgtacggc ttcatcccac gggttatcgg tgccgtgacc gtaccagata tttgccgcgc
    25201 tgaagcggct cactgaccag cgcaacatgt cctgaatggt ttgcagctca tttactgctt
    25261 catcaacgaa aattttatcc acgtattcct ccagggcatg atcgcaataa tttcggcggc
    25321 tagtttgcca tgaagatgac gataaatcag cattcacgcg cggtgagtga ggaaaaatac
    25381 gtttaaaacg atcgattgtg ctacgagtcg ggtaaactgt aggaaaatta gaaatagaga
    25441 cagataaatg aaaaagaaaa caacacttag cgaggaggac caggctctgt ttcgccagtt
    25501 gatggcgggg actcgcaaga ttaagcagga cacgattgtc caccgaccgc agcgtaaaaa
    25561 aatcagcgaa gtgccggtga aacgcttgat ccaggagcag gctgatgcca gccattattt
    25621 ctccgatgag tttcagccgt tattaaatac cgaaggtccg gtgaaatatg ttcgcccgga
    25681 tgtcagccat ttcgaggcga agaaactgcg ccgcggcgat tattcaccgg aattgttttt
    25741 ggatttacac ggtctgacgc agctgcaggc caagcaggaa ctgggcgcgt tgattgccgc
    25801 ctgtcgccgc gaacatgtgt tttgtgcctg cgtgatgcat gggcacggga agcatatttt
    25861 gaagcaacaa acaccgctgt ggctggcaca acatccgcat gtgatggcat ttcaccaggc
    25921 accgaaagag tacggcggtg atgcggcttt gttggtgttg attgaagtgg aagagtggtt
    25981 gccgccggag ttgccctgag gagttgagcg tgttgtgcca ggagcgcgga atggcagggg
    26041 cgaatgaccc tgccaggtga gaaaaggtgc gctaatacat attcagtatg taagtgaatc
    26101 ggcaggtaga atctatgggc tgtcgagatg tcgtgtccac gcgtagcttc atatcatgca
    26161 gttgcctgga cgtaatcggt tgcggctcag gcgtcaccgt cactttggca ttatcacagc
    26221 cggaagtcga gaaggtcatc tgctgtgcga taaaacggca gtagacacca cgctcatcaa
    26281 aattatttcc gttacacagt ttgccatttt ccatcaggaa agtgggcagt gtttgctcaa
    26341 taacaccacc tgttgactgc aacctgacga ctttgttatg tacaacataa ttttcattcc
    26401 aggaaacatc atacggtgcc aggggcaccg ccggacatga agaactcacc ttcgttgggc
    26461 caatatagtc aggaaaatca tcatcatacg ttttagcgaa gggatctcta ctcttaacaa
    26521 acgacgacac aatccacgga caaccatgta aattcccatc gtaataaaca aacatcttta
    26581 attcattaca tgtccatccc gttttggtct ggctatcata ctgctctaat ccaggacagg
    26641 ctgacatgga taccctgctg tccgaaattt tcgacataga tggttgagta gaactatcgc
    26701 cagtccacga aactaaatcc ggctgtgaat tgggcatgaa tgtagcctta aatatagcgt
    26761 aattaactga atctggcgtc gctataatca gatgaaactc aaactc
//
LOCUS       DADMIB010000043        25803 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.043, whole genome shotgun sequence.
ACCESSION   DADMIB010000043 DADMIB010000000
VERSION     DADMIB010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25803)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25803)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25803
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.043"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(80..2299)
                     /locus_tag="JNZ89_001703"
     CDS             complement(80..2299)
                     /locus_tag="JNZ89_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HAY8935614.1"
                     /translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDS
                     CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG
                     VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
                     GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR
                     DVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA
                     VTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY
                     VWINPPAIPLSTEEMDSVFALPYKRVLHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSF
                     CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
                     QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI
                     KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
                     FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYK
                     SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE
                     EMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR"
     gene            complement(2410..3822)
                     /gene="ftsP"
                     /locus_tag="JNZ89_001704"
     CDS             complement(2410..3822)
                     /gene="ftsP"
                     /locus_tag="JNZ89_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsP"
                     /protein_id="HAY8935615.1"
                     /translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR
                     GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT
                     VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM
                     WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ
                     SPYVEVSRGWVRLRLLNASNSRRYQLQMSDSRPLHVISGDQGFLPAPVSVKQLSLAPG
                     ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD
                     SLPMRLLPTEIMAASPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADE
                     PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS
                     QTLEMADRGSIGQLLVNPVP"
     gene            complement(3897..4634)
                     /gene="plsC"
                     /locus_tag="JNZ89_001705"
                     /gene_synonym="parF"
     CDS             complement(3897..4634)
                     /gene="plsC"
                     /locus_tag="JNZ89_001705"
                     /gene_synonym="parF"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HAY8935616.1"
                     /translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
                     LAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIP
                     FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
                     TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA
                     AHCRSIMEQKIAELDKEVAEREAAGKV"
     gene            complement(4867..7125)
                     /gene="parC"
                     /locus_tag="JNZ89_001706"
     CDS             complement(4867..7125)
                     /gene="parC"
                     /locus_tag="JNZ89_001706"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001639862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HAY8935617.1"
                     /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
                     IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
                     QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR
                     LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE
                     AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN
                     KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL
                     DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
                     IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI
                     LVSERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSLMG
                     WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ
                     GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL
                     PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARG
                     EDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID
                     SPRRASSGDSEE"
     gene            complement(7671..8153)
                     /locus_tag="JNZ89_001707"
     CDS             complement(7671..8153)
                     /locus_tag="JNZ89_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8935618.1"
                     /translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET
                     GLSPVNQSQTFGVAWDDPATTAPKAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA
                     RHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
                     "
     gene            complement(8206..8598)
                     /gene="ygiW"
                     /locus_tag="JNZ89_001708"
     CDS             complement(8206..8598)
                     /gene="ygiW"
                     /locus_tag="JNZ89_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB fold stress tolerance protein YgiW"
                     /protein_id="HAY8935619.1"
                     /translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNG
                     SVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK
                     DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
     gene            8750..9409
                     /gene="qseB"
                     /locus_tag="JNZ89_001709"
     CDS             8750..9409
                     /gene="qseB"
                     /locus_tag="JNZ89_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator QseB"
                     /protein_id="HAY8935620.1"
                     /translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP
                     YDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKP
                     FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLASEPLTLKPKEFALLEL
                     LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
                     K"
     gene            9406..10755
                     /gene="qseC"
                     /locus_tag="JNZ89_001710"
     CDS             9406..10755
                     /gene="qseC"
                     /locus_tag="JNZ89_001710"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     QseC"
                     /protein_id="HAY8935621.1"
                     /translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF
                     DTQLMLFAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDG
                     DNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIV
                     AGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRP
                     LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL
                     LQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID
                     VRLTLNVQGIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGV
                     TPEALARIGERFYRPSGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW"
     gene            10865..11446
                     /gene="mdaB"
                     /locus_tag="JNZ89_001711"
     CDS             10865..11446
                     /gene="mdaB"
                     /locus_tag="JNZ89_001711"
                     /EC_number="1.6.5.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase MdaB"
                     /protein_id="HAY8935622.1"
                     /translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA
                     DSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK
                     DPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGM
                     EPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG"
     gene            11477..11791
                     /locus_tag="JNZ89_001712"
     CDS             11477..11791
                     /locus_tag="JNZ89_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HAY8935623.1"
                     /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV
                     DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP
                     GI"
     gene            complement(11839..13731)
                     /gene="parE"
                     /locus_tag="JNZ89_001713"
     CDS             complement(11839..13731)
                     /gene="parE"
                     /locus_tag="JNZ89_001713"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HAY8935624.1"
                     /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
                     DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
                     KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQIYNIAFENGEKVQDLQVVGTCGKRN
                     TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG
                     LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG
                     GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
                     ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT
                     SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
                     SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK
                     HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGL
                     GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD
                     MAEIEV"
     gene            complement(13760..14341)
                     /gene="yqiA"
                     /locus_tag="JNZ89_001714"
     CDS             complement(13760..14341)
                     /gene="yqiA"
                     /locus_tag="JNZ89_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase YqiA"
                     /protein_id="HAY8935625.1"
                     /translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP
                     SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
                     LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA
                     SCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL"
     gene            complement(14341..15168)
                     /gene="cpdA"
                     /locus_tag="JNZ89_001715"
     CDS             complement(14341..15168)
                     /gene="cpdA"
                     /locus_tag="JNZ89_001715"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HAY8935626.1"
                     /translation="MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQA
                     VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
                     SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL
                     LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL
                     ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY"
     gene            complement(15193..15615)
                     /locus_tag="JNZ89_001716"
     CDS             complement(15193..15615)
                     /locus_tag="JNZ89_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 family protein"
                     /protein_id="HAY8935627.1"
                     /translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ
                     YRLTIVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARY
                     DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY"
     gene            complement(15616..16245)
                     /gene="nudF"
                     /locus_tag="JNZ89_001717"
     CDS             complement(15616..16245)
                     /gene="nudF"
                     /locus_tag="JNZ89_001717"
                     /EC_number="3.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose diphosphatase"
                     /protein_id="HAY8935628.1"
                     /translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHSLFNGQ
                     MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG
                     ESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA
                     DENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA"
     gene            16450..17931
                     /gene="tolC"
                     /locus_tag="JNZ89_001718"
     CDS             16450..17931
                     /gene="tolC"
                     /locus_tag="JNZ89_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane channel protein TolC"
                     /protein_id="HAY8935629.1"
                     /translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA
                     DRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSK
                     WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD
                     QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL
                     NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTAST
                     GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA
                     SEQLESAHRSIVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV
                     DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE
                     NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN"
     gene            18079..18750
                     /locus_tag="JNZ89_001719"
     CDS             18079..18750
                     /locus_tag="JNZ89_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 family protein"
                     /protein_id="HAY8935630.1"
                     /translation="MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLASCEKSDETV
                     SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA
                     QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
                     TDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSS
                     RSMGG"
     gene            18756..19916
                     /locus_tag="JNZ89_001720"
     CDS             18756..19916
                     /locus_tag="JNZ89_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HAY8935631.1"
                     /translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLPLAQ
                     VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD
                     LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
                     RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQ
                     FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
                     FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI
                     VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE"
     gene            complement(19954..20769)
                     /gene="ygiD"
                     /locus_tag="JNZ89_001721"
     CDS             complement(19954..20769)
                     /gene="ygiD"
                     /locus_tag="JNZ89_001721"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HAY8935632.1"
                     /translation="MTPLVKDIIMSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMT
                     LPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPVLAQHLV
                     ELLAPVPVTLDKEARGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLA
                     ALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWAMSFNEYVKANLTWQGAVEQHPLVN
                     YLDHEGGALSNPTPEHYLPLLYVLGAWDGQEPITIPVDGIEMGSLSMLSVQIG"
     gene            20885..21646
                     /gene="zupT"
                     /locus_tag="JNZ89_001722"
     CDS             20885..21646
                     /gene="zupT"
                     /locus_tag="JNZ89_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HAY8935633.1"
                     /translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM
                     LLISLMEMLPAALAAEGISPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLP
                     KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
                     YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAVAGIMVALSVDELMP
                     LAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG"
     gene            complement(21704..21874)
                     /locus_tag="JNZ89_001723"
     CDS             complement(21704..21874)
                     /locus_tag="JNZ89_001723"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935634.1"
                     /translation="MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYL
                     NSTREETAEKVE"
     gene            complement(22134..22787)
                     /gene="ribB"
                     /locus_tag="JNZ89_001724"
     CDS             complement(22134..22787)
                     /gene="ribB"
                     /locus_tag="JNZ89_001724"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001077009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HAY8935635.1"
                     /translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI
                     FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
                     EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
                     MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS"
     regulatory      complement(22891..23039)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            23101..23451
                     /gene="ubiK"
                     /locus_tag="JNZ89_001725"
     CDS             23101..23451
                     /gene="ubiK"
                     /locus_tag="JNZ89_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis accessory factor UbiK"
                     /protein_id="HAY8935636.1"
                     /translation="MTYPYRTTMVLNTYQYRETTMIDPKKIEQIARQVHESMPKGIRE
                     FGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRMSELENRSTE
                     IKKQPDPETLPPTL"
     gene            23735..24286
                     /locus_tag="JNZ89_001726"
     CDS             23735..24286
                     /locus_tag="JNZ89_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like protein"
                     /protein_id="HAY8935637.1"
                     /translation="MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIK
                     PGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTM
                     TGQTDLLKNTKETEIGGATGVGVRILNSQSGEVTLGTPVVITFNNTNSYQELNFKVRM
                     ESPGKDATPGNVYAQADYKIAYE"
     gene            24346..>25803
                     /locus_tag="JNZ89_001727"
     CDS             24346..>25803
                     /locus_tag="JNZ89_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY8935638.1"
                     /translation="MYKKLKLTTISELIKNIYCSLSVLIIGCASAYAVEFNKDLIEAE
                     DRENVNLSQFETDGQLPVGKYSLNAIINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTL
                     LGFTDEIIEEAQQNLIDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPP
                     ELWDHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFN
                     NGKSQANNLDFPRIYLFRPIPAINAKLTIGQYDTESSIFDSFHFSGVSLKSDENMLPP
                     DLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEE
                     DGQVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNV
                     SLHGGSVLTNRDYQSLAAGVGFNLNSLGSLSFDVTRSDTQLHNQDKETGYSYRANYSK
                     RFESTGSQLTFAGYRFSDKNFVTMNEYINDTNHYTN"
BASE COUNT         6461 a         6798 c         6373 g         6171 t
ORIGIN      
        1 ggcatataaa taaatgccta atgagataga ttctgatgta atatccccgg tagcaattct
       61 gctaccggga acagcgaatt taacgtccaa ccgccgcttt aggccgtttc ttcgcaccag
      121 cattcaccgg acgagattgc gtagacgacg ctttttttgc cgtagcaggc gtctgacgct
      181 gggtcgccat cggcgtatgt ttcgtcaacg ccggacgggt attgcggttc tggcgacgag
      241 cttcacgcat ctcttcaatg gttggcgcag gcactaagca atcgcgacgg ctaccaatca
      301 gatgcttttt acccatcgct tccagcgcct ggcggattaa cggccagttt gccggatcgt
      361 ggtaacgcaa caacgcttta tgcaaacgac gctgcttgtc gcccttcggt acgaagacgt
      421 cttcactctt ataaccaatc ttcgccagcg gttttttccc ggtgtaatac atggtggttg
      481 agttcgccag cggcgatggg tagaagttct gtacctggtc gagacggaaa cgatgctttt
      541 tcagccacag cgccagattc accatatctt catcacgcgt accggggtgc gcggagatga
      601 aataggggat cagatactgc tctttacctg cctgttttga gtaagtatcg aacagctctt
      661 taaagcggtc atagctgccc atgcccggct tcatcatctt cgataacggc ccttcttcgg
      721 tatgttccgg ggcaatcttc agataaccgc cgacgtgatg ggtcgccagt tctttgatat
      781 agcgcggatc ttccacggcg atgtcataac gcacaccaga ggcaatcagg atctttttaa
      841 tgcctttcag atcacgcgca cggcgataga ggttgatcgt tggttcgtgg ttcgtgtcca
      901 tgtgcggaca aatatccgga taaacgcacg acaaacggcg gcaggtttgc tcagcgcgtg
      961 gcgatttgca gcgcaacata tacatgttgg cagttggccc accgagatcg gaaattacgc
     1021 ccgtaaaacc tggaacggtg tcgcggatcg cttcgatctc attaatgatc gaatcttcgg
     1081 aacggctctg aataatgcgc ccttcgtgct cggtgataga acagaaagag cagccgccaa
     1141 agcagccacg cataatgttg accgaaaaac ggatcatttc gtaagccgga atacggacat
     1201 tgccataggc cggatgtagc acgcgcttgt atggcagcgc aaaaacgctg tccatctctt
     1261 cggtagaaag cggaatagca ggcgggttga tccacacata gcggtcgccg tgtttttgca
     1321 tcaatgcgcg ggcacagcct gggttggttt cgtggtgcag aatacgcgaa gcatgggcgt
     1381 acagcacttt atcgcccttc actttctcga aagaaggcag caacacgtag gttttttccc
     1441 acggtttcgg gcgcggtggc tgcacggtta cggctttggc ttcctgcttt ttcggtgcca
     1501 ccggtttgtt atccgcgcac ggcaaatctt caccatacgg atgcgggatt gggtcgattt
     1561 ttccaggggt atcaagacgg gtggaatcca cgccgctcca gccaggcagg gcctctttca
     1621 cgataatcgc ggtattacgc acatcgcgga tttcactaat cggctcgccc atcgccagac
     1681 ggtgcgccac ctccaccagc ggacgctcac cgttaccaaa catcagcatg tcggctttcg
     1741 aatccaccag cacggaacgg cgcacggtat cggaccagta atcataatgt gcggtacgac
     1801 gcagactagc ctcaataccg ccgaggatca ccggtacatc tttccacgcc tctttacaac
     1861 gctgggtata aaccagtgtg gcgcgatccg ggcgcttacc cgcgacgtta tccggcgtgt
     1921 aggcatcgtc atgacgtaaa cggcgatcgg cggtataacg gttgatcatc gaatccatgt
     1981 tgccagcagt aacaccgaaa aacagattcg gtttacccag acgcataaag tcgtctttgc
     2041 tgctccagtc cggctgggcg atgatcccga cgcgaaagcc ctgcgcttcc agcatacgac
     2101 cgcaaatcgc catcccgaag cttgggtgat cgacatacgc gtcgccagta accaaaatga
     2161 tgtcgcagct atcccagcca agttgatcca tctcttcact agacatcggc aaaaacggtg
     2221 ccggtccaaa acaggcggcc cagtactgcg gccaggagaa caggtcgcga tccggttgga
     2281 tcagggagat agagctcatt ttgcttccag aaatgataaa aaaataatca aaggccgggg
     2341 attataagcc ggaacgaaag agaaatcgaa aagtattcca tactcgccct cctcgggcga
     2401 gtatgaagat tacggtaccg gattgactaa cagttgccca atcgagccac ggtccgccat
     2461 ttccagcgtc tgactgttga agtagaacgg gaagtgcgcc caggaaggct gaccgaaata
     2521 aacaagcagc tccacttgtc cgtcaaccca aacggtatct ttccagcctc tgtcttccgg
     2581 gaacggcatc gcaccattca cgttacggat ctggaacatc acgccttcaa tatggaacgc
     2641 ttgcggctcg tccgcgcgta ccgtccagcg ttcccacgtt ccttgctgcg cggtgacatc
     2701 aatacggttg acgtcccaca gttgtccatt aatacccggg tcatcaccca gactgatatc
     2761 gcgactgcga atcggcgaag cggccatgat ttcagttggc agcaagcgca tcggaagact
     2821 gtctgtgacc agcggcagaa ggccggttgg gcgcagcgtt agcaccaggg tagaaaccag
     2881 aatgctggat ggctcaaaga agccacgaat acgatcaaca atgctcgccg cttcgccaca
     2941 ggtgatcgac acttcatcac cgttgctcat atccaccaga atctcgcggc gctcgcccgg
     3001 tgccaacgaa agttgcttca ccgatacagg agcaggcagg aatccctgat cgccagaaat
     3061 cacatgtaac gggcgactat cgctcatctg tagttgatag cgacgagagt tcgacgcgtt
     3121 cagcagtcgc aagcgcaccc agccacgcga gacttcaacg tacgggcttt gtacaccgtt
     3181 aaccagcagc gtatcaccaa caaagccgcc gcttcccggt tcgttgtatt ctggcgtacc
     3241 aaagttatcc agccgtttat cctggataat gaccggaaaa tcatccacac cataatggtt
     3301 ggggataggc agcgacttgc tgacttcatc ttccaccagc cacattccgg caaggccgtt
     3361 atagacctgc tgagccgtgc ggttgggagt attggcgtga taccacagag tagctgcgtt
     3421 ctggcgaatg ggcagtacgg gtgcccagtc agcgtttggc gacatcatcc gtgccggacc
     3481 gcccatcagc gggcctggta cctgtagccc ggccaccgtc attgagacat tttctgtcag
     3541 gcggttgctg taaataagct taacatcgtc gcccttccag acgcggatag tcggccccag
     3601 gtaacgacca ttgattcccc agaccgacgc gcgtgtccct ggcgtaaatg accagtgcgc
     3661 acgttgtaca gtcataaaca gcggttgccc acggcgagat tcaagtagcg gcggaacggg
     3721 tagcggttgc tgttgcccgg ctgcgctggc cttcagggga acagcgccgg cacaaagtgc
     3781 aatccccgat gcctgaatga actgacgccg actgagtgac atatttgctc catgtaaaac
     3841 tggctaaagt aataccgtgc aggaaagtgt tccccgcaaa aatacagatt gccgacttaa
     3901 acttttccgg cggcttcgcg ttctgcgact tctttatcga gctcggcgat tttttgttcc
     3961 attatcgaac gacaatgggc agccagctca cgaacctgat ctttgccata ctgactgacg
     4021 tcaattggcg gcagcatttc gacaatcacc agaccgttgt gcagtcgatt aagattaatc
     4081 ttattcgaag ttgtagagac gcacacggga ataatcggga cgcccgccgc aattgccgcg
     4141 tgaaatgctc cagtcttgaa cggtagcagg ccgcgaccac ggctgcgggt tccttccggg
     4201 aacatccaga tggaaatacg gcgttttttg aaatgattca cgacttccgc aatggtgccg
     4261 tgagctttag tgcgattgtt tctgtcgatc aataagttgc cggttaacca gtacaactgc
     4321 ccgaagaagg ggatccacag caagctcttt ttacctaccg tcaccgtcgg cggttgcaca
     4381 atgttcgatg ctgtcaccat gtcatagttg ttctggtggt tagcgatata gatagcattg
     4441 ccgtagcttt cagcatctgc aggtttgcgg cactcaactt tcaggccgaa cagcggcgca
     4501 agacggccaa acatatgccc aaaggtggcc acatgtttcg ggttacgcgg gctgaaaagg
     4561 cagtaaatgg agccgaatac acagactaag atgctgtaaa tcacggtaat aataagacga
     4621 aagatatata gcataacaac ctctgaaggt ctgagagact ggcattgtac gtcacctgaa
     4681 atcaggttag ggcattgtta aaagccgctc tctggaaaag cgtattgtta atcgcaacgc
     4741 atgaataaac aacggtttca agggaatttt tatcgtttcc gggggttgaa tacgctgccg
     4801 gatgacgact taacgtttca tccggcgttc cttgcaagcg ggaggaaaca ggccctcccc
     4861 ggcatattac tcttcgctat caccgctgct ggcacggcga ggagagtcga tctcaacacg
     4921 atcgatacgc tgcaaaccgc gcatcaacgt accgcggcgt ccacgttcgc cagtgacttt
     4981 ctgtaactct tccgggcgca gtttaatttt gcgtttccca acatgaatgg tcagcgtgct
     5041 ttgcggcggc agaacgtaca attgcgccag accatcttct ccacgcgcgg cttctgccga
     5101 tggaatgttg ataatcttgt tgcctttgcc cttcgacagc tgcggcagat cgcttaccgg
     5161 gaacatcaac atacggcctg cctgagtgat tgccagcagc atatcggaag catcttcaat
     5221 caccaccggc ggcataacat gggcattttc cggtaaggtg atcaaagcct tacctgcacg
     5281 gttacgcgcc accagatcgt taaaggtgca gacgaaaccg taacccgcat cggaagccat
     5341 cagcagtttc tgatcgtcgc tttccatcag catatggtca acggtcgccc caggcggcaa
     5401 cgttaatttg ccggtgagtg gttcgccctg accacgcgcc gacggcagcg taatcgggtc
     5461 gatggcatag ctacgaccgg tggaatcaac aaacactacc ggttggttgc tcttaccttt
     5521 caccgccgct ttgaagctat cacccgcttt ataattcagg cccggcgcgt cgatatcatg
     5581 gcctttagcg ctgcgtaccc agcccatcag cgacagcaca atggtgacag gttcagacgg
     5641 cagcatgtcg tgctcgctca tcgctttcgc ttcttcgcgt tcctgcaacg gcgaacgacg
     5701 atcgtcaccg taggcttgcg cgtctgcctg cagttctttc ttcagcaggt tattcatttt
     5761 acgctcggaa accaaaatgc cctgcaactg gtcgcgctct ttttccagct cactctgctc
     5821 accgcgaatc ttcatctctt ccagtttggc aagatgacgc agtttcagtt cgaggatcgc
     5881 ttccgcctgg gtttccgtaa ggccaaaccg cgacatcagc gccggtttcg gttcatcttc
     5941 gttacgaatg atctcaatca cttcgtcgat gttgagaaac gccaccagca aaccttccag
     6001 gatatgcagg cgcttgagga ctttctccag acgatagttc agtcggcggc gcacggtatc
     6061 gcgacggaac accagccatt cggagaggat ttccagcagg tttttcaccg ccggacgacc
     6121 atccagaccg atcatattga ggttaatgcg atagctcttt tccagatcgg tggtagcgaa
     6181 gaggtggttc atcacctgat ccatatccac gcggttggaa cgcggcacaa tcaccagacg
     6241 ggtcgggttc tcgtggtcag attcatcgcg cagatcgtca accatcggca gctttttgtt
     6301 gcgcatttgc gcagcaattt gctccagtac gcgcgcacct gaaacctgat gcggcaatgc
     6361 gctgataacc accgcgccat cttctttctt ccacaccgcg cgcatacgca ctgaaccacg
     6421 tccgttctcg tagattttac ggatctcggc gcgcgaagtg ataatttccg cttcagtcgg
     6481 ataatccggc ccctgcacga tatccagcag ctgatcgagc gtggttttcg gctggtcgat
     6541 taatgcgatt gccgcctgag ctacttcacg caggttatgc ggtggaatat cggtcgccat
     6601 gccgacggca ataccggtgg tgccgttaag caaaatgttt ggcagacggg caggcagcat
     6661 tttcggctcc tgcaaagtgc cgtcgaagtt tggcacccag tcagccgtcc cctgccccag
     6721 ctcgctcaat agcagttcgg aatatttcga caaccgggat tcggtgtaac gcattgccgc
     6781 gaacgatttc ggatcgtccg gcgcgcccca gttcccctga ccatcaacca gcggataacg
     6841 gtaagagaac ggctgcgcca tcaggaccat cgcttcataa caggcactat cgccgtgcgg
     6901 atggtattta cccagtacgt caccgacggt acgggccgat tttttaaatt tggcgctggc
     6961 attcaggccc agttcagaca tcgcatacac aatgcggcgc tgaacaggtt taagaccatc
     7021 gccaataaac ggcaacgcac ggtccatgat cacgtacatg gagtagttta agtaggcgtt
     7081 ttccgtaaat tcatgtagcg caaggcgctc tgccatatcg ctcattaatt ctgattcctc
     7141 aacttattcg ccagccttca aaggggcaat attgccggag atactacatt atctgccgcg
     7201 tcgagtcaca ggagatcagc gtgaatagcg ccgccggacg tgctccgacg gcgataaagg
     7261 catcaatgtg ccttgatata caactctttg ctgtagactt gatcggcata gagggcagca
     7321 caaggttgcg cccatgccac accactcggc atgggggtcc gctccgggcg attcgagaag
     7381 ttgaggttat gcgagtccag ggaagcctaa agcatcaaag tagtcgactg taagtatacg
     7441 gttcagccca gtttagctgt gtctccacca gtgccccgcg cctcctgcca taagtgcggc
     7501 ttgctcatgg atacccccga gacggcttac ggcgcaccgg ataataaatt tcgcgtatac
     7561 atggtattcc ttaccggaga aattataagc ccaacaacaa tacgcctgtg gcattgttcg
     7621 ctcaaactta tcgcgagtga tttggctcac actccggtaa agattcccca tcacgctaac
     7681 ggcacataaa catccgtttc cagtcgctgt tctgtcatac cttcggcaag attggtgtag
     7741 tgaaacagaa tcggtgcttt acgcattttc tcgccgcttg caggcagcca gtggcgaatg
     7801 atgccccata ccgtgtgtga aatatcgtcc agctcgccaa cgtggcgggc cacggcataa
     7861 cgtccaccgg taagttcacc attgctcaca ccataacgat tatcgggaat cggttcgcta
     7921 acgctgccgc agatatcaaa gcgaaacgct ttcggtgcgg tggtggcagg gtcgtcccag
     7981 gcgacgccaa aagtctggct ttggttaaca ggagaaagcc ccgtctcttt acgccacatg
     8041 ataaatttcg ccacactgta gttgagcaac tcagggctac agcggtgcgg caacatcgcc
     8101 acagggattg atgggaaatc gataatgttt acatccagtg tcaggtttgt cattttgcct
     8161 ccctgcgaaa ttattcccgg gaacgcgtcc cgggagcggt aacaattacg gatttacttt
     8221 gcggatctgt ttgacgtcaa tttcaacaga attccagtct ttatcgactt ccccctgaat
     8281 ctcaaccgta tctttcggcg tcaccgtcac accgttccag cgtttgtggt cgatatcaac
     8341 attgatagta ccgctggcat ctttaaacac gtagagatcg tcagagatgc gttcaacgat
     8401 attgccgcgc agggttaccc aggtgtcgtc acgcagggat tttgcgcttt ctacagtcgt
     8461 tacgctgccg ttcggcccct ggaatcctcc ggcctgactt tgcgttgccg atgggccaga
     8521 aaaaccgccc tgctctgctg ccatcaccgg tgcactgcac agggccatta ctgcgattac
     8581 tgctgcgaat tttttcatgt ttattactcc ctttaatgtc tgtttccgag catttaacaa
     8641 gatagtcctt aacaacttct taagggaaaa aaataaaatt taatgctgta cagagcgcgt
     8701 tacaacacgg tttactggca gcaaatacgg ttatcgcagg gatgaaaaaa tgcgaatttt
     8761 actgatagaa gatgacatgc tgattggcga cggcatcaaa actggcctta gtaaaatggg
     8821 ttttagtgtc gactggttta cacaaggtcg tcagggaaaa gaggcgcttt atagcgcacc
     8881 ttatgatgcg gtgatcctgg atttaacctt accaggcatg gatggtcgcg atattttgcg
     8941 cgaatggcga gagaaaggtc agcgtgagcc ggtactgatc ctgaccgcgc gtgatgcgtt
     9001 agcggaacgt gtagaagggc tgcgtctggg agctgacgat tatctgtgta aaccttttgc
     9061 gttgatagaa gtcgccgcca ggctggaggc tctgatgcgc cgaaccaacg gccaggccag
     9121 caacgagctg cgccacggta acgtcatgct cgaccccggc aaacgtatcg ccacgctggc
     9181 tagcgaaccc ttaacactga aaccaaaaga atttgccctg ctggaattac tgatgcgtaa
     9241 cgctggtcgg gtactgccgc gcaaactgat tgaagagaaa ctgtatacct gggacgaaga
     9301 ggtcaccagt aatgccgttg aagtgcatgt gcatcatctg cgacgcaaac tcggtagtga
     9361 ttttattcgt accgtgcatg gtattggcta cacattaggt gagaaatgaa atttacccaa
     9421 cgtcttagtc tgcgcgtcag gctgacgcta atctttttaa ttctggcctc ggtgacctgg
     9481 ctgctttcca gctttgtcgc ctggaaacaa acaacggata acgtcgatga attgttcgac
     9541 acccaactga tgctgtttgc caagcggtta agtacgctcg atctcaacga aatcaacgcg
     9601 gcggatcgca tggcacagac gccaaataaa ttaaaacacg gtcatgttga tgacgatgcg
     9661 ctgacctttg ccatctttac ccacgacggc agaatggtcc ttaatgatgg cgataacgga
     9721 gaagatattc cctatagcta tcaacgggaa ggttttgctg acgggcaact ggtcggtgaa
     9781 gacgatcctt ggcgttttgt ctggatgacc tcacctgatg gcaaatatcg catcgttgtt
     9841 ggccaggaat gggaataccg tgaagacatg gcgctggcga ttgttgccgg gcaattgatc
     9901 ccgtggctgg tcgcactgcc gattatgtta atcatcatga tggtactact gggtcgtgaa
     9961 ctcgcgccgc tgaacaaact ggcgctggca ctacgtatgc gtgaccctga ctcggaaaaa
    10021 ccactaaacg cgactggcgt acccagcgaa gtgcgaccac tggttgagtc gctaaatcaa
    10081 ctgttcgccc gcacacatgc gatgatggtt cgagaacgac gctttacctc cgatgcagct
    10141 cacgaactac gtagcccgtt aacagcgctg aaagtgcaaa ccgaagttgc gcagctctct
    10201 gacgatgatc cgcaggcacg gaaaaaagca ctgctccaat tacattccgg gatcgatcgc
    10261 gctactcgtc tggttgatca actgctcacg ctatcgcggc tggactcact ggataacctt
    10321 caggacgtcg cggagatccc gcttgaagat ctcctgcaat cgtcggtgat ggatatttac
    10381 cacacggcgc agcaggcgaa aattgacgtg cgactgacac tcaatgtcca gggcatcaaa
    10441 cgcaccggac aaccgctatt gctaagtttg ttggtgcgaa atttgctgga taacgccgtg
    10501 cgttacagtc cacagggcag cgtggtggac gtcacgctga atgccgataa tttcatcgtg
    10561 agggataacg gccccggtgt gacaccagag gcactggcgc gaattggcga acgcttctat
    10621 cgcccctccg gacaaaccgc taccggcagt ggacttgggc tatcgattgt ccagcgaatc
    10681 gccaagctgc atggcatgaa tgttgagttt gggaatgcgg aacaaggtgg atttgaggcg
    10741 aaagtaagct ggtaagggta agacttttgc taaattcgca aaagactttg cacattttgc
    10801 taatttcacc gtaccgctct gtgacgtact atagtcggca aacgtctcac cttgaggtta
    10861 aaaaatgagc aacattctga ttatcaacgg cgcgaaaaaa ttcgcccact ccaatggtca
    10921 actgaatgac accctgaccg aagtcgcgga tggcacactg cgcgacctcg ggcatgatgt
    10981 tcgcatcgtt cgcgccgaca gcgactacga tgtcaaagcg gaagtacaaa actttctctg
    11041 ggctgatgtg gtgatctggc agatgccagg ctggtggatg ggcgcgccgt ggacagtgaa
    11101 aaaatacatt gatgatgtat tcaccgaagg tcacgggacg ctgtatgcca gcgatggccg
    11161 tacccgcaaa gatccgtcaa aaaaatacgg ttccggcggc ctggtacagg gcaaaaaata
    11221 tatgctttct ctgacctgga acgcaccaat ggaagccttc accgaaaaag atcaattctt
    11281 ccacggcgtt ggcgtcgacg gtgtgtatct gccgttccat aaagcaaacc aattccttgg
    11341 catggaaccg ctgccgacat ttatcgctaa tgacgtgata aaaatgcctg atgttccccg
    11401 ctatactgaa gaatatcgca agcatcttgt ggaaattttt ggttaactag agctcaggct
    11461 ttagaaggag ttaaccatgc ttaccgtaat cgcagaaatc cgtactcgtc ctggtcaaca
    11521 tcaccgtcag gcggtattgg atcagtttgc taaaatcgtt ccaaccgtac tgaaagaaga
    11581 aggttgccac ggctatgcgc caatggtgga ttgcgctgct ggcgtgagtt tccagtctat
    11641 ggcaccggat tctatcgtga tgattgagca gtgggaaagc atcgcgcacc ttgaagcgca
    11701 tctgcaaacc ccgcacatga aggcgtacag cgaagccgta aaaggtgacg tgctggagat
    11761 gaatattcgt attctgcagc cagggattta atcctgcctt gtttgcccgg ccatcctgac
    11821 cgggcaatgt tctttccttt aaacctcaat ctccgccatg tcgcctttct cttgcaacca
    11881 gttgcggcga tcttccgagc gtttcttcgc cagtagcatg tccatcatcg cgtcagtacg
    11941 ctgatcgtct tcatcatcga tagtcaactg caccagacgg cgagtgttcg gatcaagcgt
    12001 ggtttcgcgc aattgcatcg ggttcatttc ccccagacct ttaaaacgct ggacgttcgg
    12061 cttgcctttc ttgcgtttta attgctcaag tacgccctct ttctcttctt ccgtcagcgc
    12121 gtaataaacc tctttcccga gatcaatacg gtagagcggt ggcagtgcga cgtaaacgtg
    12181 accgtgtttc accaacgcgc ggaagtgttt tacaaacaaa gcgcagagca gcgtggcaat
    12241 gtgcagacca tcggagtcag catccgccag gatacagatc ttgccgtaac gaagctggct
    12301 caaatcgtcg ctgtcaggat cgataccgat cgctaccgaa atatcgtgca cttcctgcga
    12361 agccagcact tcgtcggaag agacttccca ggtgttaagg atcttacctt tcagtggcat
    12421 gatcgcctga tattcgcgat cgcgcgcctg cttggcagat ccgcctgcgg agtcaccttc
    12481 cacaagaaac agttcggtgc ggttaaggtc ctgcgcggta cagtcagcca gtttgccagg
    12541 cagcgccgga ccgctggtca gctttttacg caccactttt ttagccgcac gcatacgacg
    12601 ctgggcgctg gaaatcgcca tctctgccag caactccgcc gcctgaacgt tctggttcag
    12661 ccacaggata aaggcatctt tcaccacgcc agaaacgaat gccgcgcact gacgcgaaga
    12721 gagacgctct ttggtctgcc cggcaaactg cggatcctgc atttttactg acagcacata
    12781 ggcgcagcga tcccagatat cttccgccga cagctttaca ccgcgcggca gaatgttgcg
    12841 gtattcacag aactcacgca tcgcgtccag caggccctga cgcagaccat taacatgggt
    12901 accgccctgc atcgttggga tcaggttgac gtagctttcg gtcagcagtt caccgccttc
    12961 cggcagccac agtagcgccc agtccaccgc ttcagtatcg ccagcgaaat taccgataaa
    13021 cggtttttct ggcagcgtcg gtaaaccgtt taccgcttcc gccaggtaat cattcagacc
    13081 gtcctgatag caccagcgct gttcggtgtt gttgatctca tctttaaagg taatctcaac
    13141 gccggggcac agtactgctt tggctttcag cacatgcgtc aggcgtgaaa cagaaaaacg
    13201 cgggctatcg aagaaggttt catccggcca gaaatggacg ctggttccgg tattgcgttt
    13261 accgcaagtg ccgacaacct gtaaatcctg caccttttcg ccattttcaa aggcgatgtt
    13321 ataaatctga ccatcgcggc gcacgttaac ttctacgcgc ttcgacaggg cgttaaccac
    13381 cgaaatcccc acgccatgca ggccgccaga gaactggtaa tttttgttag agaatttacc
    13441 gcctgcatgc agacggcaaa gaatcagttc aaccgccggt acaccctctt ccgggtgaat
    13501 atccaccggc atcccgcgcc catcgtcaat aacttctaac gactggtcag catgtaaaat
    13561 aacgtccacg cgttttgcgt gacccgccag tgcttcatcc acactgttat caatgacttc
    13621 ttgccccaaa tggttagggc gagtggtatc ggtatacatc cccggacggc ggcgaaccgg
    13681 ctcaagcccg gtgagtacct caatggcatc agcgttataa gtttgcgtca tggtttaagt
    13741 tagtaattcg agttgatcgt cagagatggt gcagaccaag aaaatcgacg atcgggttga
    13801 aataatcttc gaagcccgtg aatgcgtggt tgccgccttc tatgacagtc tggcggcagg
    13861 aagcgtagta cgccaccgcc tggcggtaat ccagcacttc atctcccgtc tgttgcagca
    13921 gccagatcaa atccggcgct tccagcgggt caatctgcat gactttaaga tcgtaaatat
    13981 ggcgtgactc tagcacatat tgctgcccgg tgtaggggtt ctcgttctga ccgagatagt
    14041 ccgtcagcag ttcaaacggg cgcaccgccg ggtttaccac cactgcgggc agcataaaac
    14101 attgtgacaa ccaggtggcg taatatcccc ccagtgacga accgacaata cccagcgaat
    14161 cgccgccatg ttccaggaca atggattcca gcagctctgc cgcgtcggaa ggatacggcg
    14221 gcaactgcgg aatgatcatc tcaacgtcag ggtgatgttc cgccagccag ttttttaaca
    14281 agctcgcttt tgcagagcgc ggcgagctgt tgaaaccgtg taaataaaga agcgtagaca
    14341 tcagtagcct tctgaagcgg tatcaggttg gaaacgtgtg tccgccaggc gatgcacctc
    14401 ggtggtcagc gtgccatcag catgtaactc gagagtacgc cagccgggcg cgatggtatc
    14461 cagcgtaaag ttggaacagt gcggcttaaa ctgcacacag gtcgacggcg ttgccagcag
    14521 gcggcgaccg ttccagtcga gatccagctc ctgatgaata tgaccgcaca gcaagtattt
    14581 gacgtgcgga aacttcgcca gcacggtatc cagttcgccc gcgttacgca gactgtgttg
    14641 atcgagccaa ctacaacccg caggtagcgg atgatgatgc agcagcagca acgtatggcg
    14701 ttctggcgca tcggccagtt tacgttccag ccactcaagc tgaaactcgc tcagctcacc
    14761 gtgcggcacg ccaaacacct ggctatccag caacaggatt tgccattgct caccaataaa
    14821 cacgcgcttc gccggggaga tacccgcatc ctgtaacgcg ctgtacatcg cgggctggaa
    14881 atcgtggttg cccggcagcc agacgcaggg cgcacgaaaa cttgcgatgc cttcagcgaa
    14941 atgctgatag gccgcagagg attgatcctg cgctaaatca cctgtcgcga caatcaggtc
    15001 gaattcgtgc tgatgtggac gaatcgcctc cagcaccgcc tggtagcttt cccaggtgtt
    15061 tacccctaac agggcttcgt gcttttgtgc aaacaggtga gtatcggtaa tttgtaaaat
    15121 cctgactctg gcctcaccag ccagaggaag ggttaacagg ctttccaaat ggtgtcctta
    15181 ggtttcacga cgctagtaaa ccggaatcgc catcgctcca tgtgctaaac agtatcgcaa
    15241 ccagtccgct aaaaactggt taatttgatg cttttcgtcg cgttgatgca actttttatt
    15301 aggataatca taccgcgctt tgaagcgaaa aatctgctgg cttgaacaca cttcagccac
    15361 catcgcgtca tgatacagac gcaccgtcat tgacggaagg ctccagtaac tgatcgcggg
    15421 cgcagtctgt tctattgtca ccagggtagt gtatcgggtc gattccacaa tcgtcagccg
    15481 atattgtgcg tttgccacct gatagcttac agtttcgccg ggtgcgtcat tgcgcggtaa
    15541 caaacggcgc aattgtgaaa agttcatctc gcacaggcgc atcatttcag gaaagtcagg
    15601 tgtgtaacgc ttcatttatg cccactcatt ttttaacgct tggtggtgca gctgcagcca
    15661 ttgcaaagcg atgaccgacg ctgcgttgtc gattttcccc tcttctaccc actggtatgc
    15721 ctgttcccgg cttaccacat gaacgcgaat atcttcgttt tcatcagcca gaccatgaat
    15781 accgcttgcg gtcgtggcgt ccacttcgcc caccataatt gacgaacgct cactggtgcc
    15841 ccccgggctt gccaggaaac ttaacaccgg tttggtccgt ttgactatca gccccgcctc
    15901 ttcaatcgct tcgcgacggg caacatcttc cacactttca ccctcttcaa tcatcccggc
    15961 aaccatctcc agtagccagg gggtttcgct agtgtcgtac gcggcaattc gaatctgctc
    16021 aatcagcaca acttcatcac gcactgggtc aaagggtagc aagactgcgg cgtgaccgcg
    16081 ctcaaaaatt tcccgccgca cctcatgact catttgcccg ttgaatagac tatgacgaaa
    16141 tctataaaga tctaatgaaa aaaagccgcg ataaagtgtt tctcgtgcaa taatttctac
    16201 atcgtttttg ccaaatgtaa cgggcaggtt gtctggctta agcattgtta atgtcctggc
    16261 actaatagtg aattaaatgt gaatttcagc gacgtttgac tgccgtttga gcagtcatgt
    16321 gttaaattga ggcacattaa cgccctatgg cacgtaacgc caaccttttg cggtagcggc
    16381 ttctgctaga atccgcaata attttacagt ttgatcgcgc taaatactgc ttcaccacaa
    16441 ggaatgcaaa tgaagaaatt gctccccatt cttatcggcc tgagcctttc tgggttcagt
    16501 tcgttgagcc aggccgagaa cctgatgcaa gtttatcagc aagcacgcct tagtaacccg
    16561 gaattgcgta agtctgccgc cgatcgtgat gctgcctttg aaaaaattaa tgaagcgcgc
    16621 agtccattac tgccacagct aggtttaggt gcagattaca cctatagcaa cggctaccgc
    16681 gacgcgaacg gcatcaactc gaacgcgacc agtgcgtccc tgcagttaac tcaatccatt
    16741 tttgatatgt cgaaatggcg tgcgttaacg ctgcaggaaa aagcagcagg gattcaggac
    16801 gtcacatatc agaccgatca gcaaaccttg atcctcaaca ccgcgaccgc ttatttcaac
    16861 gtgttgaatg ctattgacgt tctttcctat acacaggcac aaaaagaagc gatctaccgt
    16921 caattagatc aaaccaccca acgttttaac gtgggcctgg tagcgatcac cgacgtgcag
    16981 aacgcccgcg cgcagtacga taccgtgctg gcgaacgaag tgaccgcacg taataacctt
    17041 gataacgcgg tagagcagct gcgccagatc accggtaact actatccgga actggcggcg
    17101 ctgaatgtcg aaaactttaa aaccgacaaa ccacagccgg ttaacgcgct gctgaaagaa
    17161 gccgaaaaac gcaacctgtc gctgttacag gcacgcttga gccaggacct ggcgcgcgag
    17221 caaattcgcc aggcgcagga tggtcactta ccgacgctgg atttaacggc ttctaccggg
    17281 atttctgaca cctcttatag cggttcgaaa actcgtggtg ccgctggtac ccagtatgac
    17341 gacagcaata tgggccagaa caaagtgggc ctgagcttct cgctgccgat ttatcagggc
    17401 ggaatggtta actcgcaggt gaaacaggcc cagtacaact ttgttggtgc cagcgagcaa
    17461 ctggaaagcg cgcatcgtag catcgtgcaa accgtacgtt cctccttcaa caacattaat
    17521 gcatctatca gtagcattaa cgcctacaaa caagccgtag tttccgctca aagctcatta
    17581 gacgcgatgg aagcgggcta ctcggtcggt acgcgtacca ttgttgatgt gttggatgca
    17641 accaccacgc tgtacaacgc taagcaagag ctggcaaatg cgcgttataa ctacctgatt
    17701 aatcagctga atattaagtc agccctgggt acgttgaacg agcaggatct gctggcactg
    17761 aacaatgcgc tgagcaaacc ggtttccact aatccggaaa acgttgcccc gcaaacgccg
    17821 gaacagaatg ctattgctga tggttatgcg cctgatagcc cggcacccgt cgttcagcaa
    17881 acatccgcac gcactaccac cagtaacggt cataaccctt tccgtaactg atgacgacga
    17941 cggggcttcg gccccgtctg aacgtaagac aacgtaaaga tacgggttat ctgccgcatt
    18001 cttccccctt ctcgcttcaa tttcgaccag ccatcctcta ttctgatggg tatttaccac
    18061 tggtcccgga agacaaaaat gaaacggaca aaatccatac gccacgcatc gttccgcaaa
    18121 aactggagcg cacgccatct gacaccagtc gctctcgcgg ttgccactgt ttttatgctg
    18181 gctagctgtg aaaagagtga tgaaacagtg tctctctatc aaaatgctga cgactgttca
    18241 gctgcaaacc caggcaaaag cgccgaatgt accaccgcgt acaacaatgc gctgaaagaa
    18301 gccgaacgta ctgcgccgaa atacgccacc cgtgaagact gtgttgctga atttggtgaa
    18361 ggtcagtgcc agcaggcacc agcccaggct ggcatggcac cagaaaacca ggcgcaggcc
    18421 cagcaatcca gcgggagttt ctggatgccg ctgatggccg gttacatgat ggggcgtctg
    18481 atgggcggcg gcgcgggatt tgcacagcag ccgctgttct cctcgaaaaa cccagccagc
    18541 ccggcttacg gtaaatatac cgacgcgacg ggtaaaaact atggcgcagc ccagccaggc
    18601 cgcaccatga ccgtaccgaa gacagccatg gcaccaaaac cggcgaccac tactaccgtt
    18661 acccgtggcg gttttggtga atctgttgcc aaacaaagca ctatgcagcg tagcgcaacc
    18721 ggcacctctt ctcgttcaat gggtggctga taccgatgga aagagtcagt attaccgagc
    18781 gcccggactg gcgtgaaaaa gcccacgaat acggtttcaa ttttcacacc atgtacggcg
    18841 agccgtactg gtgtgaagat gcttactaca agttgcccct cgcccaggtt gaaaagctgg
    18901 aagaagtcac cgccgaactg caccagatgt gcctgaaagt ggtggaaaaa gtgatcgcca
    18961 gcgatgagct gatgaccaaa ttccgcattc caaaacacac ctggagtttt gtgcgtcagt
    19021 catggctgac tcaccagcca tcgctttatt cgcgtcttga tctggcatgg gatggcactg
    19081 gcgaacctaa actgctggaa aataacgccg atacaccaac gtcactatac gaggcggcgt
    19141 tctttcagtg gatctggctg gaagatcagc ttaacgccgg taacttgccg gagggcagcg
    19201 accagtttaa cagtctgcaa gaaaagctaa tcgatcgctt tgtcgagttg cgtgaacagt
    19261 atggcttcca gttgctgcat ctcacctgct gtcgcgacac ggtggaagat cgcggaacca
    19321 ttcagtattt gcaggactgc gcgacggaag ctgaaatcgc taccgagttc ctctacattg
    19381 acgatatcgg gttaggtgaa aaaggtcagt tcacggattt acaggatcag gtaatttcca
    19441 acctgttcaa gctgtatcca tgggaattta tgttgcgtga gatgttctcc accaagctgg
    19501 aggatgcagg cgtacgctgg ctggaaccgg cgtggaagag cattatctcc aacaaagcgc
    19561 ttctaccgct actgtgggag atgttcccga atcacccgaa cctgctgccc gcttattttg
    19621 cggaagatga tcatccgcaa atggaaaaat atgtggttaa accgatcttc tcccgtgaag
    19681 gcgcaaacgt gtcgatcatt gagaacggca aaaccattga agcagcggaa ggtccgtatg
    19741 gcgaagaagg gatgattgtt cagcaattcc atccgttacc gaaattcggc gacagctata
    19801 tgctgattgg tagctggctg gtgaacgatc aacccgccgg aattggcatt cgtgaagacc
    19861 gtgcattgat cacccaggat atgtctcggt tttatccaca tatttttgtt gagtaatcaa
    19921 tgatgccgga tggcattcgc catccggtaa ttgttaacct atctgcaccg acagcatact
    19981 caggctgccc atttctatac catcgaccgg aatggtaatt ggctcctgcc catcccacgc
    20041 acctaagaca tacaacaacg gcagatagtg ctccggcgtt gggttcgata acgcgccacc
    20101 ttcatggtcg aggtaattca ccagaggatg ctgctctacc gccccttgcc acgtcagatt
    20161 cgctttcaca tactcattaa acgacatcgc ccaaggatat ggtgaactat caccgtgcca
    20221 cttcactgta cgcaggttat gcaccacgtt gccactggcg accaacatta ttccttcatc
    20281 tcgcagcgct gccagtttgc gccccatttc gaaatgccag gcggcaggtt tgctactgtc
    20341 gatactcaac tgcaccatcg ggatatcggc gtcaggatac atcttaatca gcacgcccca
    20401 ggaaccgtgg tcaaagcccc tggcttcttt atccagcgtc accgggaccg gcgctaacag
    20461 ctcaaccaga tgctgtgcca gcacaggcga acccggagca ggataatgcg tatcgtacag
    20521 cgcctgcggg aagccaccaa agtcatgaat cgtgggcggc gtctccatcg cggtcactcc
    20581 tgttccacgg gtaaaccagt gagccgaaac caccacaatc gcttgcgggc gtggcaatgt
    20641 catccccaac ttctgccagc tgcgggtata caaattatct tccagcacgt tcatcggact
    20701 accgtgacct aaaaacaatg ctggcatacg tgttgaagac atgatgatat ccttaactaa
    20761 gggtgtcatt ttgatatcct cacaatacgc ttgttcggcg gagtaagaac ccggataaca
    20821 atgatgatga tcatcagtta ttttgacgat ctgcctgaag gtgaagattt ataaggagtt
    20881 gtcgatgtca gtacctctca ttctgaccat actggcgggg gcagccacgt ttattggcgc
    20941 gtttctcggc gttctcggac aaaaaccctc gaaccgctta ctggcgtttt cgctaggttt
    21001 tgcggcgggg atcatgttgc tcatctcatt aatggaaatg cttcctgccg cactagcagc
    21061 tgaaggaata tcgcctgtgt tgggttatgg aatgtttatc ttcggtctgc ttggctactt
    21121 tggcctggac cgcatgttgc cgcatgcgca tccgcaggat ttaatgcaaa aatcggtgca
    21181 gccgttgcca aaatcgatca agcgcacagc cattctgctc actctcggca tcagtctgca
    21241 taacttcccg gaagggattg ccacctttgt cacggcgagc agcaacctgg agctgggatt
    21301 tggcatcgca ctggccgtcg cgttgcacaa tatccctgaa ggtctggcag tggcaggccc
    21361 ggtttatgcg gcaacggggt ctaaacgcac cgcgattctg tgggcgggga tttctggact
    21421 agcagaaatt cttggtggtg tgctggcgtg gttaatcctc ggtagcatga tttccccggt
    21481 ggtcatggcg gcggttgcag gaattatggt ggcgctctcg gttgatgaat taatgccgct
    21541 cgccaaagag attgacccta ataataaccc cagctatggc gtactatgtg gaatgtcagt
    21601 gatgggattc agtttagtgc tgctacaaac ggcgggaatt ggttaaaaac aacatcagaa
    21661 gttgtccagc acatggacaa cttctgccag cttcacgaaa gccttattct accttttcgg
    21721 ctgtctcttc tctcgtactg tttaagtatt tgttccgcgc ttcaagcagt gcgtctctgt
    21781 cctggcgaaa cgcccgacaa taacgtttca aatgcaggaa ataacccacc acaaccagag
    21841 caatcaatac aatccagtac caggcgataa acatccttta cccttaatat ttaacaatac
    21901 taaacattta gcgcataaat ttcacatatc ctttttcgga tatattcata tggtcgcata
    21961 ataacggaac aattatatga ttttgatcat aatgaaaaag aatgcctgat attaatgaaa
    22021 ttttctcata gaaagagaag cggaattaac atcttgcata gcagggcaaa ataaaaaccg
    22081 aagccagcta caacttcggt ttcttgatta aggcagtaat taagcagcgg ttttcagctg
    22141 gctttacgct catgtgcctg acggtatgcc accaggtctt caatagtcac gagcgccata
    22201 ttgtgtttat tggcaaactc aatgcactct ggtgcacgcg ccatcgtgcc atcgtcatta
    22261 gtcagctcac acagcacacc agccggttta aagcctgcca gcgtcatcaa atcaatagtc
    22321 gcttcagtat gaccgccacg cgtcagtaca ccacctgcct gcgcgcgaag tgggaaaacg
    22381 tggcccgggc gattcagatc agaaggtttt gcgccatcgg caatcgctgc gcgaacggtc
    22441 gtaatacgat cagcggcaga aacaccggta gtcacacctt cagccgcttc aatggtcacg
    22501 gtaaaaccgg tgccataggc gctggtgtta ttttctacca tcattggcag atcaagttgt
    22561 ttacggcgat cttcagtgat gcacaggcaa acaataccgc taccgtggcg aatggtcagc
    22621 gccatctgct caacggtcat ggtttctgcc gggaagatca tatcgccttc gttttcacgg
    22681 tcttcatcat caagcaccat tacaccgcgt ccttcacgca gcgcagccag tgcattttca
    22741 acacgttcga aaggcgtacc aaaagaggaa agtagcgtct gattcatggt aaaaaaaact
    22801 cactaaaatt atggttacca gaatcagggc agtcttagga gtggcggcat atagccaaaa
    22861 taacgtgagc gggtccatgc ccgacagaat cgttactctc tcccatccgg actctaaccg
    22921 tcggccccgg aattacaccg gatctgctgt cctttgagtt cgcacccaaa gcgctcgcgg
    22981 gctttcaact gagttgattt accgccggtg gggaatttcg ccccgccctg agaataagcg
    23041 gattcactat aacgctaatg attagcggca gcaacgcata gcttcacata attctggttt
    23101 atgacttacc cttatcgcac tacaatggta ctcaacacct atcagtacag ggaaactaca
    23161 atgattgacc cgaaaaaaat tgagcaaatc gctcgccaag ttcacgaatc aatgcctaaa
    23221 ggaatcaggg agttcgggga agatgtggag aaaaaaatcc gccaaaccct acaagctcag
    23281 ctgacgcgcc tcgaccttgt aagccgtgaa gagttcgacg tccaaacgca agtcctgtta
    23341 cggactcgtg agaaactggc gctgcttgaa caaagaatga gcgaactgga aaatcgcagt
    23401 actgagatta aaaagcagcc agatccagag actctccccc caacgctgta aacatttgtc
    23461 tttaatgcac tgtaaattat gaattaatct tctaatttac agtgctttct attaccttat
    23521 cgcttaattc cattcagaat atcaccacaa aaatgaatga gtgcaattga aaatataatt
    23581 gttatgtatt tttttaagtt ttacttaatc catatttaga taaactaatt tcataaaacc
    23641 cgaaaagtaa aatataatat ttgaatgatt agcaatcctt aaataacagt tactaatcat
    23701 tcattttcta cttatattta tataaaggaa tattatgtct gcttttaaaa agtcacttct
    23761 tgttgctggc gtagcaatga ttctttccaa taacgtattt gctgacgaag gtcacggcat
    23821 tgttaaattt aaaggtgaag ttatctctgc tccatgttca attaaaccag gtgacgaaga
    23881 cttaactgta aatctgggtg aagtagcaga taccgttctg aaaagcgacc agaaatcttt
    23941 ggctgagcct ttcactattc acctgcaaga ctgcatgttg agccagggtg gaaccactta
    24001 ttcaaaagcg aaggttactt tcaccacagc gaatactatg acgggtcaga ctgacctgct
    24061 gaaaaacacc aaagaaactg aaatcggtgg tgccacaggc gttggcgtac gtattctgaa
    24121 tagccagagc ggcgaagtga ctttaggtac tccggtagta attacattca acaatactaa
    24181 cagctatcag gaactgaact tcaaagttcg tatggaatcc ccgggcaaag atgctacccc
    24241 gggcaacgtt tacgctcagg ctgactataa gattgcttac gagtaatcac attaggccgg
    24301 gttcgcccgg ccacatcatt aacggattaa tgataagtgg aacagatgta taaaaaatta
    24361 aaattaacca caataagcga attgattaaa aatatttatt gttcattatc cgttctcatc
    24421 attggttgtg cgtcagctta tgccgttgaa ttcaacaaag atttaatcga agccgaagat
    24481 cgtgaaaacg ttaacctttc ccaatttgaa actgatggcc aattacccgt aggtaaatac
    24541 tcattaaacg ctattattaa taataaaagg acgccaatcc atctggacct gcaatgggta
    24601 ttaattgata accaaactgc agtttgtctg actccagagc aattaacatt attaggcttt
    24661 actgatgaga ttattgaaga ggctcagcaa aacctgatcg atggttgtta ccctatcgaa
    24721 aaagaaaaac aaattacaac ttatctcgat aaagggaaaa tgcaattatc catatctgca
    24781 cctcaggcat ggttaaaata caaagatgca aactggacgc ctcctgaact ttgggatcat
    24841 ggtattgctg gggcatttct tgactacaat ttatatgcct ctcattatgc accacatcag
    24901 ggcgataatt cacaaaatat aagttcctat gggcaggctg gggttaatct tggggcctgg
    24961 cgcctgcgta ctgattacca gtacgatcag tcatttaaca atggcaaaag ccaggcgaac
    25021 aacctggatt ttccgcgtat ttatttgttt cgcccaatcc cagcaattaa tgcaaaacta
    25081 actataggtc aatacgatac tgaatcctct attttcgact ctttccattt ttctggcgtt
    25141 tcgttgaaaa gcgatgagaa tatgttgccg cctgatctac gtggttacgc accgcaaatc
    25201 acgggtgttg cacaaacgaa tgcaaaggtc actgtctcac agaacaaccg tattatttat
    25261 caagaaaatg ttcctcctgg cccatttgct attactaatt tattcaatac attacagggg
    25321 caactggacg tcaaggttga agaagaggac gggcaagtca cgcaatggca agttgcatct
    25381 aatagtattc cttatctgac gcgtaaaggg cagattcgct acaccactgc tatgggtaaa
    25441 ccgaccagcg ttggtggtga ttccttacaa caacccttct tctggactgg tgaattctca
    25501 tggggttggc tgaacaatgt atccctgcat ggtggttcag ttttaacaaa ccgtgattat
    25561 caatctctgg ctgccggcgt tggctttaac cttaactcat tgggttcatt atcttttgat
    25621 gtcacacgat ctgatactca gttgcataat caggataaag aaacgggtta tagctaccgc
    25681 gctaactatt caaaacgttt tgaatctacc ggtagccagc tcactttcgc tggttaccgt
    25741 ttctctgata aaaactttgt gacaatgaat gaatatatca atgacactaa ccattacacg
    25801 aat
//
LOCUS       DADMIB010000044        25509 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.044, whole genome shotgun sequence.
ACCESSION   DADMIB010000044 DADMIB010000000
VERSION     DADMIB010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25509
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.044"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..183
                     /locus_tag="JNZ89_001728"
     CDS             <1..183
                     /locus_tag="JNZ89_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HAY8935639.1"
                     /translation="ACMAITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPD
                     IGRQLSPDAWDDVSQE"
     gene            253..1029
                     /gene="yaaA"
                     /locus_tag="JNZ89_001729"
     CDS             253..1029
                     /gene="yaaA"
                     /locus_tag="JNZ89_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HAY8935640.1"
                     /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP
                     QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD
                     FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA
                     AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF
                     IIENRLTKPEQLTGFNSEGYFFDEASSSNGELVFKRYEQR"
     gene            complement(1182..1478)
                     /locus_tag="JNZ89_001730"
     CDS             complement(1182..1478)
                     /locus_tag="JNZ89_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HAY8935641.1"
                     /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGY
                     YWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR"
     gene            complement(1692..2978)
                     /gene="thrC"
                     /locus_tag="JNZ89_001731"
     CDS             complement(1692..2978)
                     /gene="thrC"
                     /locus_tag="JNZ89_001731"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HAY8935642.1"
                     /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID
                     EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP
                     TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG
                     KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR
                     LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN
                     DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE
                     TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE
                     TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ"
     gene            complement(2979..3911)
                     /gene="thrB"
                     /locus_tag="JNZ89_001732"
     CDS             complement(2979..3911)
                     /gene="thrB"
                     /locus_tag="JNZ89_001732"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HAY8935643.1"
                     /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF
                     SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS
                     VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI
                     ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
                     PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA
                     QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN"
     gene            complement(3913..6375)
                     /gene="thrA"
                     /locus_tag="JNZ89_001733"
     CDS             complement(3913..6375)
                     /gene="thrA"
                     /locus_tag="JNZ89_001733"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HAY8935644.1"
                     /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT
                     NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK
                     HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY
                     LESTVDIAESTRRIAASRIPADHMVLMAGFTSGNEKGELVVLGRNGSDYSAAVLAACL
                     RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
                     QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
                     VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV
                     TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
                     GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
                     LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
                     FLREGFHVVTPNKKANTSSMDYYHLLRHAAEKSRRKFLYDTNVGAGLPVIENLQNLLN
                     AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK
                     LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG
                     KVLRYVGNIDEDGACRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
                     NDVTAAGVFADLLRTLSWKLGV"
     gene            complement(6455..6520)
                     /gene="thrL"
                     /locus_tag="JNZ89_001734"
     CDS             complement(6455..6520)
                     /gene="thrL"
                     /locus_tag="JNZ89_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thr operon leader peptide"
                     /protein_id="HAY8935645.1"
                     /translation="MKRISTTITTTITITTGNGAG"
     gene            complement(6734..7420)
                     /locus_tag="JNZ89_001735"
     CDS             complement(6734..7420)
                     /locus_tag="JNZ89_001735"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HAY8935646.1"
                     /translation="MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPAT
                     RWVAHGSGDIIDNIKVFPTLVESLHDVDFTVATTARSRAKYHYYATPVELVLLLEEKS
                     SWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQ
                     QPTKSDTTADQHQLQALRERVMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRL
                     LHDIEKNITK"
     gene            complement(7820..7960)
                     /locus_tag="JNZ89_001736"
     CDS             complement(7820..7960)
                     /locus_tag="JNZ89_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935647.1"
                     /translation="MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILT
                     AT"
     gene            8056..8772
                     /gene="arcA"
                     /locus_tag="JNZ89_001737"
     CDS             8056..8772
                     /gene="arcA"
                     /locus_tag="JNZ89_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HAY8935648.1"
                     /translation="MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILS
                     EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYK
                     LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
                     PEIIATIHGEGYRFCGDLED"
     gene            complement(8832..10184)
                     /gene="creD"
                     /locus_tag="JNZ89_001738"
     CDS             complement(8832..10184)
                     /gene="creD"
                     /locus_tag="JNZ89_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HAY8935649.1"
                     /translation="MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDA
                     IRQSTSGPQKLVGPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEE
                     RKIGIYTGQVWHSDLTLKADFDVSRLSELNAPNIILGKPFIVISVGDARGIGVVKAPE
                     VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLQLNMALNLSGTGDLSVVPAGRNS
                     EMPLTSNWPHPSFLGDFLPAKREVSESGFQAQWQSSWFANNLGERFASGNDTGWENFP
                     AFSVAVTTPADQYQLTDWATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLV
                     MFYLLLLALSEHIGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVM
                     WGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDQLRIWK
                     "
     gene            complement(10242..11666)
                     /gene="creC"
                     /locus_tag="JNZ89_001739"
     CDS             complement(10242..11666)
                     /gene="creC"
                     /locus_tag="JNZ89_001739"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HAY8935650.1"
                     /translation="MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLID
                     TATLLAELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDSQG
                     KVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRL
                     IGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGAGMVWWINRSIARLTRYAD
                     SVTDNKPVPLPELGSSELRKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRG
                     AAEILREGPPPEVVARFTDNILTQNARMQALVETLLRQARLENRQEVVLTVVDVAALF
                     RRVSEARTVQLAEKNITLHVMPTEVNVAAEPALLEQALGNLLDNAIDFTPESGRITLS
                     AEVDQEHVALKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFN
                     GEVTLRNVQEGGVLASLRLHRHFT"
     gene            complement(11666..12355)
                     /gene="creB"
                     /locus_tag="JNZ89_001740"
     CDS             complement(11666..12355)
                     /gene="creB"
                     /locus_tag="JNZ89_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HAY8935651.1"
                     /translation="MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKAR
                     QLVPDVMILDVGLPDISGFELCSQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYV
                     AKPFSPREVCARVRTLLRRVKKFSSPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEF
                     LLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLHAKLRAINPDLSPINT
                     HRGMGYSLRGL"
     gene            complement(12368..12841)
                     /gene="creA"
                     /locus_tag="JNZ89_001741"
     CDS             complement(12368..12841)
                     /gene="creA"
                     /locus_tag="JNZ89_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CreA"
                     /protein_id="HAY8935652.1"
                     /translation="MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEA
                     FDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGE
                     VVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ"
     gene            13052..13921
                     /gene="robA"
                     /locus_tag="JNZ89_001742"
     CDS             13052..13921
                     /gene="robA"
                     /locus_tag="JNZ89_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /protein_id="HAY8935653.1"
                     /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
                     VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
                     YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMR
                     YQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVM
                     LQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRP
                     INLRCELLIPIRR"
     gene            complement(13918..14565)
                     /gene="gpmB"
                     /locus_tag="JNZ89_001743"
     CDS             complement(13918..14565)
                     /gene="gpmB"
                     /locus_tag="JNZ89_001743"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase GpmB"
                     /protein_id="HAY8935654.1"
                     /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAK
                     ELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEEN
                     WRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST
                     ILGLPAWAARRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR"
     gene            14617..15138
                     /gene="yjjX"
                     /locus_tag="JNZ89_001744"
     CDS             14617..15138
                     /gene="yjjX"
                     /locus_tag="JNZ89_001744"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP phosphatase"
                     /protein_id="HAY8935655.1"
                     /translation="MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQ
                     PFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSA
                     TLPLPAVILQKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVIL
                     ALSPFHNAVYQAL"
     gene            complement(15223..15549)
                     /gene="trpR"
                     /locus_tag="JNZ89_001745"
     CDS             complement(15223..15549)
                     /gene="trpR"
                     /locus_tag="JNZ89_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HAY8935656.1"
                     /translation="MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLT
                     PDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEE
                     VLLKSD"
     gene            complement(15639..17576)
                     /gene="sltY"
                     /locus_tag="JNZ89_001746"
     CDS             complement(15639..17576)
                     /gene="sltY"
                     /locus_tag="JNZ89_001746"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase"
                     /protein_id="HAY8935657.1"
                     /translation="MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAW
                     DNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQ
                     SRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGK
                     SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAI
                     ISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNED
                     QIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTW
                     LARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYE
                     LKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYA
                     FNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAW
                     NPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQ
                     QFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAY
                     YRYFMGDKPTLMSATEWGRRY"
     gene            17787..19454
                     /gene="ettA"
                     /locus_tag="JNZ89_001747"
     CDS             17787..19454
                     /gene="ettA"
                     /locus_tag="JNZ89_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HAY8935658.1"
                     /translation="MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAG
                     KSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALK
                     RLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKI
                     ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHD
                     RYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWV
                     RQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYG
                     DRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVD
                     QFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGER
                     GRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIA
                     THILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK"
     gene            complement(19761..20993)
                     /locus_tag="JNZ89_001748"
     CDS             complement(19761..20993)
                     /locus_tag="JNZ89_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide
                     kinase/transcriptional regulator NadR"
                     /protein_id="HAY8935659.1"
                     /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
                     AQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDD
                     TRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
                     IKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRY
                     WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
                     IALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
                     DEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEDDYD
                     SRFLRCVELVREMMGEQR"
     gene            complement(21014..22396)
                     /gene="radA"
                     /locus_tag="JNZ89_001749"
     CDS             complement(21014..22396)
                     /gene="radA"
                     /locus_tag="JNZ89_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HAY8935660.1"
                     /translation="MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPT
                     VARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGG
                     NPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIE
                     QICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMV
                     GHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG
                     LREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLE
                     QNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQ
                     DLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKL
                     SDALSVFDDL"
     gene            complement(22445..23413)
                     /gene="serB"
                     /locus_tag="JNZ89_001750"
     CDS             complement(22445..23413)
                     /gene="serB"
                     /locus_tag="JNZ89_001750"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase"
                     /protein_id="HAY8935661.1"
                     /translation="MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYG
                     RGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLG
                     KIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRS
                     RVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKL
                     RLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGAND
                     LPMIKAAGLGIAYHAKPKVNEKAEVTIRHADLMGVFCILSGSLNQK"
     gene            23519..24163
                     /locus_tag="JNZ89_001751"
     CDS             23519..24163
                     /locus_tag="JNZ89_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HAY8935662.1"
                     /translation="MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ
                     LEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR
                     SGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
                     TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE"
     gene            24191..25207
                     /gene="lplA"
                     /locus_tag="JNZ89_001752"
     CDS             24191..25207
                     /gene="lplA"
                     /locus_tag="JNZ89_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase LplA"
                     /protein_id="HAY8935663.1"
                     /translation="MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTV
                     VIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
                     SIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLS
                     RLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEA
                     EIISPDKTPDLPNFAEIFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHI
                     TRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPDQEKELRELSTWIA
                     GAVR"
BASE COUNT         6131 a         7029 c         6335 g         6014 t
ORIGIN      
        1 gcctgcatgg ctattaccaa tttgaccgcc attttactgc tctcgcctgt ggttcatacc
       61 attgccagtg attatctacg ccagcgtaaa ctcggcgtgc gcccggtgtt tgatccgttg
      121 cgttatccgg atatcggtcg ccagctttct ccggacgcgt gggatgatgt ttcgcaggag
      181 taatcacaac tatcgatcaa ctcattctct ttttttgcta aagtcggcat aaatttcctg
      241 caaggactgg atatgctgat tcttatttca cctgcgaaaa cgcttgatta ccaaagcccg
      301 ttgaccacca cgcgctatac gctgccggag ctgttagaca attcccagca gttgatccat
      361 gaagcgcgga aactgacgcc tccgcagatt agcacgctga tgcgcatcag cgacaaactg
      421 gcgggtatca acgccgctcg ctttcatgac tggcagccag atttcacgcc ggcgaatgcc
      481 cgccaggcga ttctggcgtt taaaggtgat gtctacaccg gcttgcaggc cgaaaccttc
      541 agcgaagacg atttcgattt tgcccaacag catttgcgaa tgctttccgg cttgtatggc
      601 gtactgcgcc cgctcgattt aatgcagcct tatcgtctgg aaatggggat ccgtcttgag
      661 aatgcccgag ggaaagatct gtatcaattc tggggagata tcatcaccaa caagctgaac
      721 gaggcgctcg cagcacaagg cgataatgtg gtgattaatc tggcgtcaga tgagtatttt
      781 aaatcggtga agccgaagaa attgaatgcc gagattatca agccggtgtt cctcgatgag
      841 aagaacggca aatttaagat catcagcttc tacgctaaga aagcacgcgg tctgatgagt
      901 cgtttcatta ttgaaaatcg gctgaccaaa ccagagcaac tgactggttt taatagcgaa
      961 ggttacttct ttgatgaagc ttcctccagc aatggcgaac tggtgtttaa acgctacgag
     1021 cagcgttaag tttgcagtca atgccggatg cggcgtgaac gccttatccg gcctacaaaa
     1081 gcatgcagat tcaatatatt gcagaattca cgtaggcctg ataagacgcg ccagcgtcgc
     1141 atcaggcgct gaatgccgga ttgttacccg gcatttgtca tttagcggtg atgtttgcct
     1201 ggaccatgac cgccgtgatg atcatgagga gctttcttat ggtggcgcgg cggtggcggc
     1261 ggtccgtgtg ggtgccagcg attgcctcgc cattcataat gttgtttcca ccagccgtgg
     1321 tcgcgccagt gacctccatc ccagtaatag ccacgattat cacgattgcc tatctgtaat
     1381 tttactgacg ggactaacgt aatttccgca gcctgtgctg ccatgggagc gaccagaacc
     1441 agggaaagtg cgagtacgat agattgcatc tttttcacag gttactcctt ttatcattgc
     1501 ccgttatggg tcgatatccg gagattacgc gatgagaacg acggttgtta ttctccgcaa
     1561 tcctaatctc taagttaccg catttattga gaatatctcc tttttccctg tcgtttttct
     1621 ccataatttc ttcataaaaa agccgggctg cataaaagca aacccggcct gattgagata
     1681 atgaatagat tttactgatg attcatcatc aatttacgca acgcagcaaa atcggcgggc
     1741 agattatgtg aaagcaaggg taaatcagca cgttctgcca gctcttttgg cagatccaac
     1801 gtttcaccga gaatcgcttc cacgctctct ttaaatttcg ccggatgcgc ggtgccgagg
     1861 aacaagccat attcgcctgg attcaactgg tcacgcagcg cacgatacgc tacggcagcg
     1921 tgcggctccg aggtgtagcc cagttctttt aactcacgca ttgtctgttg cgtggtttca
     1981 tcatccacgg ctgcataacc cagctctttc agttgccaga ttttgcggcg gaacaactct
     2041 tccacacgcg gccagttgtt cggctgactc acgtccatcg cgttggataa cgtcgcctga
     2101 gtcgctttgg gtgaccactg accgtcgtgc aggaaacgtg gcacggtatc gttcacgttg
     2161 gtcgcagcaa taaaacgttt caccggcaga ccgagtgact tcgccagcag acccgccgtc
     2221 aaatcgccga agtttccgct tggcaccgag acaaccagct ggttgcgcgc ttcctgcggc
     2281 agctgcgcaa ctgcttcaaa gtagtagcaa atctgcgcca gcaaacggct gatgttaatc
     2341 gagttagctg agtttaaccc cagcgccact ttcagctctt catcatcaaa cgcctgcttc
     2401 accagcgcct gacaggcatc gaaatcgccg tcgatggcaa cagtttcgat attgccgccc
     2461 aatgtacaga acagtttttc ttgcagtgga ctgattttgc ctcgtggata gaggataacc
     2521 actttcacat tcggtaaacc gtagaaagca tgagccactg ccgctccggt atcaccggag
     2581 gtcgcggtca gaatggtcac tggcttatcg cccgcaatat gggtcagcat ttgtgccata
     2641 aagcgaccgc cgaaatcttt aaatgccagc gttggcccgt ggaacaattc cagacaaccg
     2701 acatcgcttt caacattggc gaccggagcc gggaaggcaa acgccgcgcg cacgcgctct
     2761 tccaggattt cctgcgggat ttcatcacca ataaacgccg agaggatctt cgcactgcgg
     2821 gtgacaaaat ccagcttcag catctcatca atttcagtca ggctgaattc cggcaggtcg
     2881 tgcggaaaaa acagcccctg atttttgccc aacccctggg ttacggcttg cgcaaagctg
     2941 acctgctcat tgtgatcttt cagattgtag agtttcattt agttttccag tactcgtgcg
     3001 cccgccgtat ccagccggca aatatgaaca aaaccttcct gattttgcag gtagttctta
     3061 cccaaccagt cggcaacgcg ctgggcggta tccggcttgt cacacagagc gaacaaggtc
     3121 gggccggagc cggagatacc gctcgctacc gcgccgattt ccgcaaccgc ctgccgcgcc
     3181 tgccggaagc caggcagtaa ccgttcacgg tagggttcag cgataacatc tttcatcagc
     3241 ttcgcggcaa gctcaggctg acgggaatag caggcgtgaa tgaagccagc cagatgtcgc
     3301 ccgtgcgcaa tgcaatcctg gcggcgatac tgcgccggta aaatagccct ggcttctgcc
     3361 gttgagactt taatccccgg atacgccagc acccacagcc actcatcaaa ccctggcact
     3421 tgctggctga tgatgtcgtt ttcttcgatc atcaactgca taccaccaag aaaacacggt
     3481 gccacgttgt cgtaatgaat gctgccggag attcgtcctt ccagctcgcc catcaaagcc
     3541 agcaaacgag tgtcattaag cggcttgcca cagtgttcat tcatcgccat cagcgccgcg
     3601 accaccgaac aggcgctgga gcctaagccc gaaccgattg gcatattctt ttccagagtc
     3661 atcgccactg gaatttgctt gccaagctcc tggcaaaaac gctcccagca ctgataaacg
     3721 atattttccc gtggttctga cggcagctta tcggcaaagc gtccgaggtt gttgagactg
     3781 aatgtctctg ccgcctcaac cgtgactaca tctccgagca atgcaccatc aacaggtgtc
     3841 accgccgccc cgagcacatc aaacccgacg ctcatattgg cactggaagc cggggcataa
     3901 actttaacca tgtcagactc ctaacttcca tgagagggta cgtagcagat cggcaaagac
     3961 accggcagct gtaacgtcat tgcccgcacc atatccgcgc agcaccaacg gcagcggctg
     4021 ataatagtgg ctataaaagg ccagggcgtt ttcgccattt ttcactttga acagcggatc
     4081 attaccatcc acttcggcaa tcttcacgcg gcaggcacca tcttcatcaa tattgccaac
     4141 atagcgcaaa acttttcctt catcacgggc cttcgccacg cgcgcggcaa agagatcgtc
     4201 gagctgtgac agattcgcca taaaagcggc aacatcaccc tcagcgttaa actctgcggg
     4261 cagcacaggt tcaatttcaa tatccgccag ctccagttca cgtcccgttt cacgagcgag
     4321 aatcaatagc ttacgcgcta catccatacc agaaagatca tctcgcggat ccggttcggt
     4381 ataacccatt tcccgcgcca gagtagtcgc ctcggagaaa ctcatgcctt cgtctaactt
     4441 gccgaagata taagaaagcg aacctgaaag aatgccggag aacttcatca attcatcacc
     4501 agcattgagc agattttgca ggttctcaat aaccggtaat ccagccccaa cgttggtgtc
     4561 atagaggaat ttacgccgcg atttttccgc cgcatgacgc aacagatggt agtaatccat
     4621 cgacgaggtg ttggcctttt tgttcggcgt gacaacgtgg aaaccttcgc gcaagaagtc
     4681 ggcatattga tccgccactg cctggctgga ggtgcagtca acaatgaccg ggttcagcag
     4741 atgatattct ttcacgaggc gaattaagcg cccgagatta aacggctctt tggcttgcgc
     4801 cagttcttcc tgccagtttt ccagatttag gccatgcaca ttggtgagca gtgccttcga
     4861 gttggcaaca ccgcagacac gtaagtcgat atgtttattc ttcagccagc tttgttgacg
     4921 cttcagttgc tccagcagcg caccgccaac gccaccgacg ccaatcacaa acacttcgat
     4981 aacctgatcg gtattgaaca gcatctgatg agtaacgcgc acgccagtgg tcgcatcatc
     5041 gttatttacc acgacagaga ttgagcgttc agaagatccc tgagcaatgg cgacaatgtt
     5101 gatattggcg cgggccagcg cggcaaagaa tttcgccgag atcccacgca aggtgcgcat
     5161 accatcacct accaccgaga taatggccag ccgttccgtc accgccagcg gctccagtaa
     5221 gccttctttc agttccaggt agaactcttc ctgcattgcc cgttcagctc gcacacagtc
     5281 gctttgtgga acgcagaaac tgatactgta ttcggaagat gattgcgtaa tcagcaccac
     5341 ggaaatacgg gcgcgtgaca ttgcagcaaa gacgcgcgcc gccatgccga ccattccttt
     5401 catccccgga ccagaaacgc tgaacattgc catattattc agattggaaa tgcctttgac
     5461 cggtaattcg tcttcatcac ggctggcacc aatgagcgta cctggtgctt gaggatttcc
     5521 ggtattttta atcaggcaag ggatctggaa ctgggcgatg ggggtaatgg tgcgggggtg
     5581 aagaacttta gcgccgaagt aggaaagctc catcgcttcc tggtaggaca tcgacttcaa
     5641 caacctcgca tcgggcacct gacgcgggtc gcaggtatag accccgtcaa cgtccgtcca
     5701 aatctcgcaa caatcggcgc gtaaacaggc agccagcacc gccgcggagt agtcggaacc
     5761 gttacgtcca agtaccacca gttcgccttt ttcattaccg gaggtgaaac ctgccatcaa
     5821 caccatgtga tcagccggaa tgcggcttgc cgcaatacgg cgggtggact cagcaatatc
     5881 gacggtagat tcgaggtaat gccccactgc cagcagtttt tcgaccggat cgataacggt
     5941 aacgttgtga ccacgagctt ctaacacgcc ggccataatg gcgatcgaca ttttctcgcc
     6001 acggcaaatc agcgcagcgt tgatgctatc cgggcactgc cccaacaaac taatgccatg
     6061 caggacatgt tttatttggg caaattcctg atcgacgaaa gttttcaatt gcgccagcgg
     6121 gaaccccggc tgggcggcgg cgagtcccgt caaaagttcg gcaaaaatac gttcggcatc
     6181 gctgatattg ggtaaagcat cctggccgct aatggttttt tcaatcatcg ccaccaggtg
     6241 gttggtgatt ttggcggggg cagagaggac ggtggccacc tgcccctgcc tggcattgct
     6301 ttccagaata tcggcaacac gcagaaaacg ttctgcattt gccactgatg taccgccgaa
     6361 cttcaacact cgcatggttg ttacctcgtt acctttggtc gaaaaaaagc ccgcactgtc
     6421 aggtgcgggc ttttttctgt gtttcctgta cgcgtcagcc cgcaccgtta cctgtggtaa
     6481 tggtgatggt ggtggtaatg gtggtgctaa tgcgtttcat ggatgttgtg tactctgtaa
     6541 tttttatctg tctgtgcgct atgcctatat tggttaaagt atttagtgac ctaagtcaat
     6601 aaaattttaa tttactcacg gcaggtaacc agttcagaaa ctgctatcag acactctttt
     6661 tttaatccac acagagacat attgcccgtt gcagtcagaa tgaaaagctg aaaaatactt
     6721 actaaggcgt tttttatttg gtgatatttt tttcaatatc atgcagcaaa cggtgcaaca
     6781 ttgccgtgtc tcgttgctct aaaagcccca ggcgttgttg taaccagtcg accagtttta
     6841 tgtcatctgc cactgccaga gtcgtcagca atgccatgac tcgttcgcgt aaagcttgca
     6901 gttgatgttg gtctgccgtt gtgtcacttt tcgtcggttg ttgtattaat gttgctaatt
     6961 gatagcaata gaccatcacc gcctgcccca gattgagcga aggataatcc gccaccatcg
     7021 gcacaccagt aagaacgtca gccaacgcta actcttcgtt agtcagcccg gaatcttcgc
     7081 gaccaaacac cagcgcggca tggctcatcc atgaagattt ttcctctaac agcagcacca
     7141 gttctactgg cgtggcgtag taatgatatt tcgcccgact gcgcgcagtg gtggcgacag
     7201 tgaaatcgac atcgtgtaac gattcaacca gtgtcgggaa aactttaata ttatcaataa
     7261 tatcaccaga tccatgtgcg acccagcgag tggctggctc cagatgtgcc tgactatcga
     7321 caatccgcag ttcgctaaaa cccatcgttt tcattgcccg cgccgctgcc ccaatatttt
     7381 ctgctctggc gggtgcgacc agaataatcg ttatacgcat attgccactc ttcttgacca
     7441 aatgaccgcg aacagggtga tcactgtcaa cttattacac ggtgcgaatt tacaaatcct
     7501 taacgtaagt cgcagaaaaa gccctttact tatcttaaaa aaggctaaac tatttcctga
     7561 ctgtactaac ggttgaattg ttaaaaaatg ctacatatcc ttctgtttac ttaggataat
     7621 tttataaaaa ataaatctcg acaattggat tcaccacgtt tattagttgt atgatgcaac
     7681 tagttggatt attaaaataa tgtgacgaaa gctagcattt agatacgatg atttcatcaa
     7741 actgttaacg tgctacaatt gaacttgata tatgtcaacg aagcgtagtt ttattgggtg
     7801 tccggcccct cttagcctgt tatgttgctg ttaaaatggt taggatgaca gccgtttttg
     7861 acactgtcgg gtcctgaggg aaagtaccca cgaccaagct aatgatgttg ttgacgttga
     7921 tggaaagtgc atcaagaacg caattacgta ctttagtcat gttacgccga tcatgttaat
     7981 ttgcagcatg catcaggcag gtcagggact tttgtacttc ctgtttcgat ttagttggca
     8041 atttaggtag caaacatgca gaccccgcac attcttatcg ttgaagacga gttggtaaca
     8101 cgcaacacgt tgaaaagtat tttcgaagcg gaaggctatg atgttttcga agcgacagat
     8161 ggcgcggaaa tgcatcagat cctctctgaa tatgacatca acctggtgat catggatatc
     8221 aatctgccgg gtaagaacgg tcttctgtta gcgcgtgaac tgcgcgagca ggcgaatgtt
     8281 gcgttgatgt tcctgactgg ccgtgacaac gaagtcgata aaattctcgg cctcgaaatc
     8341 ggtgcagatg actacatcac caaaccgttc aacccgcgtg aactgacgat tcgtgcacgc
     8401 aacctgctgt cccgtaccat gaatctgggt actgtcagcg aagaacgtcg tagcgttgaa
     8461 agctacaagt tcaatggttg ggaactggac atcaacagcc gttcgttgat cggccctgat
     8521 ggcgagcagt acaagctgcc gcgcagcgag ttccgcgcca tgcttcactt ctgtgaaaac
     8581 ccaggcaaaa ttcagtctcg tgctgaactg ctgaagaaaa tgaccggccg tgagctgaaa
     8641 ccacacgacc gtactgtaga cgtgacgatc cgccgtattc gtaaacattt cgaatctacg
     8701 ccggatacgc cggaaatcat cgccaccatc cacggtgaag gttatcgctt ctgtggtgat
     8761 ctggaagatt aatcggcttt accaccgtca aaaaaaacgg cgctttttag cgccgttttt
     8821 atttttcaac cttatttcca gatacgtaat tgatcgtcca ttgtaacttc tttactggct
     8881 ttcattttcg gcagtgaaaa cgcataccag tcgatattac gagtcacaaa catcatgccg
     8941 gccagcgcca ccaccagcac actggttccc aacaacagcg cgctatcggc agagttgagc
     9001 agtccccaca tcacaccatc cagcaacaac agcgcgaggg taaacaacat gctgttgcgc
     9061 cagcctttca ataccgcctg caaataaata ccgttcatta acgccccaat cagactggcg
     9121 attatccatg ccacggtaaa accgatatgt tcagaaagcg ccagcaagag caaataaaac
     9181 atcaccaatg aaagccccac cagcaaatat tgcattgggt gtaaacgttg cgcggtgagc
     9241 gtttcaaaaa caaagaacgc cataaaagtc agtgcaatca gcagaatggc gtacttagtc
     9301 gcccagtccg ttaattggta ttgatcggct ggcgtcgtca ctgcgacgct aaacgcgggg
     9361 aagttttccc agccggtatc attgcctgaa gcaaaacgct caccgagatt attagcaaac
     9421 cagctgcttt gccattgcgc ctgaaaacct gactcgctaa cttcccgttt ggctggtaga
     9481 aaatcaccta aaaaactggg atgcggccag ttgctggtta agggcatttc gctattacgc
     9541 ccggcaggca ccacagaaag atcgccggta ccgcttaaat tcagtgccat attcagctgc
     9601 aggttctgct tccgccagtc cccttcgggt aaagggatat gcacgccctg cccgccttgc
     9661 tctaacccgg taccgggttc aatggtcagt gccgttccgt taacttcagg cgctttcacc
     9721 acaccaatac cacgcgcatc cccgacgcta atcacaataa agggcttgcc taagatgata
     9781 tttggcgcgt tgagctcgct aagacgcgaa acatcgaaat cggcttttag cgttaaatca
     9841 ctgtgccaga cctgaccggt ataaatccct atcttgcgtt cttccacgtt ctgattgcca
     9901 tcaaccatca atgactcagg taaccaaaaa tggataaaac ttcgtttccg ctccacggtt
     9961 ttatcctctt cctgcaccgt ataaagctcg gtcacaggaa tagcgataag cggcccaacg
    10021 agtttttgcg gcccgctggt actttggcga atcgcatctt ccacatcgct acggtaatcg
    10081 gcacgttcga caatcacttg ccgaatcagc attatcggaa tcaacaacag caatactgca
    10141 ccaaacaagg tggtcatttt ccagaacagg ggggatttca acatagtctt ctcctttgca
    10201 atggcagcag gatacgaagg ctatgtggga agaatttgaa gctatgtgaa gtgacggtga
    10261 agtcgaagcg aggccagcac gccaccttcc tgcacgttgc gcagcgtgac ttcgccgtta
    10321 aacaaacggg cgacctcact gacgaacgcc aaccccagac cgctgctttt ttgcccattt
    10381 gcacgcggca aagagtaaaa gcgttcaaaa atacgtgaca gcgcgtagtc aggaatacca
    10441 ctaccggtat ccagcacctt aagggcgacg tgttcctgat ccacttcggc gcttagcgtt
    10501 atgcgaccgc tctcgggggt aaaatcgatg gcgttatcca gtaaattccc cagcgcctgc
    10561 tccagtaacg ccggttcagc agcaacatta acctcagtgg gcataacatg tagagtgatg
    10621 tttttttctg ccaactgcac ggtgcgcgct tcgctgacgc ggcgaaataa tgccgccaca
    10681 tcaacaacag tcagaacgac ttcctgacga ttctccagtc ttgcctggcg tagtaacgtt
    10741 tctaccaatg cctgcatacg cgcattttgt gtcagaatgt tgtcggtaaa acgagccacc
    10801 acttccggtg gcggaccttc gcgtaaaatt tccgccgcgc cacgaatcgc cgccagtggg
    10861 ctttttagct catgggttaa cgcataaaca tactgctcaa tatagttttt cccttccagc
    10921 ttcacgcgca tactttccag cgcctgcgca agcttacgca actcgctact gccgagttca
    10981 ggaagaggaa cgggcttatt gtcagtgacg gaatcggcat agcgagtgag ccgggcaatg
    11041 gagcggttga tccaccaaac catgcctgcg ccaatcacca gtgcaatccc cagcaaaatg
    11101 gcgctggccc ataaaattcg ccgctcgcta cgcttaatga ccggagccat cgccgcgttc
    11161 ggtttgccta cgctcaaaac gccaataagc cgcgagccgt ccataatcgg cgcggcaaca
    11221 tacatcaccg aactttcggg atcggcagga ttttgcaacg tgctgcgcgc accatactga
    11281 ccacgcaacg ttagccagac gtcattccag cgcgaataat cctgcccaac ggctttattt
    11341 gccgaatcga acaatacttt accctgcgaa tcggtcatat agacatgata ttcattgcgc
    11401 actttgttaa tgccaccgat attggcgcga aacggacgat gttgtagctg attaaacgcc
    11461 tgcgccagtt gcccatgcgt tgggtcccca gagagcaaat cgggacgcgc cagctccgcc
    11521 agcaacgttg cggtgtcgat caacgtcccc tccgttgctc ttcgcacgcc cggtttaact
    11581 tctttgacaa aaatagccag tacgaaccag gccgccaccg ccaccagtaa aaaatagccc
    11641 agcagcaacc gcatgccgat acgcattaca ggcccctcag gctatatccc atgccgcgat
    11701 gagtattaat cggtgaaaga tcggggttga tggcacgcag cttggcatgc aacgttttaa
    11761 tgtgggtatc aacggtgcga tcgtaggtgt cctgcgcatc ttcccacacg ctatccatca
    11821 gttgctggcg ggaccagacg cggcctggcg acttgagtaa cgtcttcagc aataaaaact
    11881 cataccgcgt cagcgttaat ggcgtgtcaa accagctgat ctgcgccgcg ggttcattca
    11941 attcaaaatg accaatacgg atgacgggag acggcgacga gaacttcttc acccgacgca
    12001 gtaaggtgcg caccctggcg cacacttcgc ggggtgaaaa cggtttagcc acatagtcgt
    12061 cagcgccaat ttccagccca agcaggcgat cgacctcttc acttcgggcc gtcaggaaca
    12121 gtacaggtaa cgccggatgg agcgccagta actggctgca caattcaaag ccgctgatat
    12181 caggcaaacc aacgtcgaga atcatgacgt cgggaaccag ctggcgagct ttatccagca
    12241 ccggcaagcc tcgctcaaag acctcgacgg caaaaccttc ctgctgcaac atgtagacca
    12301 gcgtgtcggc tatcccttgc tcatcttcca ctaaccagac cgtttcccgt tgtataaatc
    12361 gcctctgtta ttgccgccac ggcatgacag gaaccgcgct aatcgcgttt ttcggcgaac
    12421 cttctacaac tttgtcggag taagccagat aagcgagcgc gttgcgtttg gcgtcataaa
    12481 agcgcacgac ctgtaacgac ttaaagacca gggacgtgcg ttttttgaat actacctcgc
    12541 cctgagcttt gccgttttta atacgatccg acagttcaat cggcccgact tgctgacaag
    12601 aaatagccgc atcggaggta tcttccgcca gacccaatcc ccctttaata ccacctgttt
    12661 tcgcccggct cacataacag gtgacatttt tcacatcggg atcgtcaaag gcttccacaa
    12721 caattttgtg atccgggccg atcattttaa atacggtgtc gaccgaacca atctcttctg
    12781 catgagccaa tggccccagc attatcaggc ttaaagacag gatcaaatgc ttgtatttca
    12841 tattgttacc atttttatct attacacgag caattagttc gtcacggtaa ataacatatt
    12901 gattaagaac aaaatctcaa ttcttttatt tccgtcaagc cctacaacat actctactaa
    12961 gaaaaaaaca ctgaatgcta aaacagcaaa aaatgctatt atccaattac ctgatgtcag
    13021 gtgctcgttg ttgaaaggat gaggatattt tatggatcag gccggcatta ttcgcgacct
    13081 tttaatctgg ctggaaggtc atctggatca gcccctgtcg ctcgacaatg tagcggcgaa
    13141 agcaggttat tccaagtggc acttacagag aatgtttaaa gatgtcactg gccatgctat
    13201 tggcgcgtat attcgtgctc gtcgtttgtc gaaatcggcg gtcgcactac gcctgactgc
    13261 gcgtccgatt ctggacatcg cgctgcaata ccgcttcgac tctcaacaga catttacccg
    13321 cgcattcaag aagcagtttg cccagactcc tgcactttac cgccgttctc ctgaatggag
    13381 cgcctttggt attcgcccgc cgctacgtct gggtgaattc acaatgccag agcacaaatt
    13441 tgtcaccctg gaagatacgc cgctgattgg tgttacccag agctactcct gttcgctgga
    13501 gcaaatctct gatttccgcc atgaaatgcg ttatcagttc tggcacgatt ttctcggcaa
    13561 cgcgccgacc attccgccag tgctctacgg cctgaatgaa acgcgtccga gtcaggataa
    13621 agacgacgaa caagaggtat tctataccac cgcgttagcc caggatcagg cagatggcta
    13681 tgtactgacg gggcatccgg tgatgctgca gggcggcgaa tatgtgatgt ttacctatga
    13741 aggtctggga accggcgtgc aggagtttat cctgacggta tacggaacgt gcatgccaat
    13801 gctcaacctg acgcgccgta aaggtcagga tattgagcga tactacccgg cagaagacgc
    13861 caaagcggga gatcgcccaa ttaatctgcg ctgtgaactg ctgattccta tccgccgtta
    13921 acgctgcagc tcatctaatg caggggcgtc cagatgcgag atgtcccctg cggtttcaac
    13981 gacccagcca gacgccagcc acaggctttc ctgataatcc acgcgcgaaa tagaacagtt
    14041 acgcagacgt aagcggcgcg ctgcccatgc tggtaatccg agaatcgtac tcaccagaca
    14101 tcccagtgca ataccatggc tcaccagcag cggtcggctt ccctgcggta agtcccggca
    14161 agattccagt gccgcattga cgcgatcgct gagctcctgc attgactcgc cttcaggaat
    14221 acgcccgtca acggtgccat tgaccagctg ccgacgccag ttctcttctt cttcggtcag
    14281 agaatcgata tgtctttttt ccagcacacc catgtttaat tcacgcaggc gagaatcaaa
    14341 gatgatgtca cagccgcagg cctgggcgat gatttccgcc gtacgccggg tgcgtcctaa
    14401 atcgctactg ataatatgcg taatgccaag ctctttggca cgggttgcca cctgcatcgc
    14461 ctgttgctca cctttggcgg tcagcgggct gtcagactgg ccctgaatac gtcgctcggc
    14521 gttccactgc gtttcaccgt ggcggactag gtatacctgt aacatgcttt ttttccgtat
    14581 actgctgtaa cgttaatttt ctgagtaatg ctgattatgc accaagttgt ctgtgcgacc
    14641 accaatcccg ctaaaattca ggccattctg caggcatttc acgagatctt cggcgaagga
    14701 tcctgccata ttgcatccgt tgccgtcgag agcggtgtac cggaacagcc ctttggcagt
    14761 gaggaaacgc gcgctggcgc acgaaatcgg gtagcaaatg cccgccgttt acttccagag
    14821 gctgattttt gggtggcgat tgaagctggc atcgatggtg acagcacttt cagttgggtg
    14881 gtgattgaaa acaccagcca gcgcggcgag gcgcgttcgg ctactttgcc gttacctgcg
    14941 gtgattctgc agaaagtgcg tgaaggtgag gcgcttggtc ccgtgatgtc gcgttatacc
    15001 ggtattgatg agattggtcg taaggaaggg gcgatcggcg tgtttaccgc cgggaaactc
    15061 actcgcgcca gcgtctatca ccaggcggtg atcctggcgc tgagtccgtt tcacaatgcc
    15121 gtgtatcagg cattgtagga cggataaggc gttcacgccg catccggcat tcggtgcacg
    15181 atgcctgatg cgacgctgcc gcgtcttatc aggcctacaa aatcaatcgc ttttcagcaa
    15241 cacctcttcc agccactggc gcagctccac gggcgcggct ttcaggctgt tagatccacg
    15301 cgtaatcgtc gcgatgcccg cgccgagttc attttttaac tcacgctgac tcatttcgcc
    15361 acgcaacagc tcttcgacaa tacgcacgcg agtccccaac gcttcgcgct catctggcgt
    15421 cagcatcagg tttaacaacg gtaaatggag atcgttttgg taggcattct taagcaggtc
    15481 gacaaaacgt aaccactcct ggtgacgctg ttctgccatc gctgctgaat agggtgattg
    15541 ttgggccata atatgtcgcc attgttagcg ggggaagcaa aatgcctccc ccggttgtac
    15601 tcgctaaaga gtacgatagc atatcataaa cgtgcggatc agtaacgacg tccccattcc
    15661 gtggcgctca tcaacgtcgg tttatccccc atgaaataac ggtagtaagc gtcataagcc
    15721 agcacgttct tcacataacc gcgcgtctcg gagaacggaa tactctcgac aaatgccaca
    15781 gcgtcgatac gcccggcgct gttgccaagc caggttcgca cccgtccagg tccggcgtta
    15841 taagctgctg aggagaaaat acggttattg ccaaactgct gataaacata ttgcaggtaa
    15901 ctggtgccaa tgttgatatt cgtttccgga tccagcaatt gcccagggct gctataacca
    15961 ggaatagaga acatcttcac cgtatgggtc gctgtaccag gcataatctg catcaggccg
    16021 ctggccccta ccggtgattt cactttcgga ttccaggcgc tctcctgacg ggcaatcgcc
    16081 atcgcatagc tttgcgggat ctctttccca ctggtgtaac gtttgaaaag atcgttgtaa
    16141 gccagcggga atcgctcttc cagatgatcc caaagcttcc cggcgatcgt tgcctgaacg
    16201 ctaagatccc accattggtt attgaaagca taccgagcca gttgagcctg ctctgttttt
    16261 gacttgctct tcaccagatt ggcccactcg ctacgcgcgg tgttatcgag attccagtac
    16321 atcaactcgc gcacgcgcgc catctccggc ccctgagtca gggcgctgtc aacattctgc
    16381 ggcgctttat caatcttcag ctcatactct tctccgatgc gttgtgctgc aaccatcggg
    16441 tagaaaccac gctgttgcat gagttgatgc aaaatctctt tcgcttcagc ttcacgtccg
    16501 cgttccagca ataaatccgc ctgccagtaa cgccattcat ctttctcttt tgcttccatc
    16561 ggcagacgcg ccagccaggt attcaggccg cgacgatcgc cggtgccaag tgccattcgc
    16621 acacggcgtt caatcaacga cgtggattgc gagcgcataa tggcgtcatc gcgccatttc
    16681 gcctgctcgt cggtgacatc gttgcccatc aaacgccagg cgacgatatc gcgcagctcc
    16741 tgaatctgat cttcattaag ctgctgcgcc tgggcaagcg acgggatcat cagccgtgca
    16801 ttttcagcat cctgccgcgc cacactggca aacgccaccg ctgccatttg acgggtaaaa
    16861 tcggtcgctc cggttgtacg cgcgaaggtc agtaccgtat tagggttgtt cgccagtgaa
    16921 atgattgccg aggcgatagt ctggtaatcg gcaggcatct gccctgccag cactgttacc
    16981 aggccagtgt tacccgcttt catcgccaga cggatacgct ctaaatacgc cagcggatct
    17041 tgtttacctg acgcacgcca gacgctaaat aacttgtcac aggcgttagg ctggctcttg
    17101 ccggttagcc acagctcttt cgccccttgc caggcttctt cactctgccc ggtgttccat
    17161 ttcgcatagt agtaattaca ttgcgcttcg gtagttccgg gcttttccgg gctaaaggct
    17221 aacaagccac gccagtcttc acgccgcgcc agttcattga cgaaacgaga ttgcagcgtg
    17281 cgagcgggag gaagcgtggg gttagcgcga acaaagttag tgaccgtcac cgccggttga
    17341 ttcatcagat catcggtgat ctggcggtat tccaggtagg gataaagcgg ataatccttc
    17401 agtccaggca tcatttgttc gaccacatcc atttgtcgat tatcccaggc ctgcttgatt
    17461 tgcgcgtaac ggctacgctg ctcatccagt gagtcggctc gcgccacgct gctgaccgtc
    17521 agcagacaga caccggcagc caacagccgc caggtaactt gtttggcttt ttccacaagc
    17581 gcatcctcta agtgtaaata catcaatgca gcgtcatgcc gcgtaataga tttatgctaa
    17641 ccagtcattg ccgtttacgc cacgttacgg acactttttt acttttactg cgaaggtgat
    17701 cgaccaactg ggattaggcg gggaaaaagg ctacacttcg cctttgaaaa ctcatcatca
    17761 cgataaacat agaggcgaag tccaacgtgg ctcaattcgt ttataccatg catcgtgtcg
    17821 gcaaagttgt tccgccgaaa cgtcatattt tgaaaaacat ctctctgagt ttcttccctg
    17881 gggcaaaaat tggtgtcctg ggtctgaacg gcgcgggtaa gtctaccctg ctgcgcatta
    17941 tggcaggcat tgataaagac atcgaaggtg aagcgcgtcc gcagccagac atcaagattg
    18001 gttacctgcc gcaggaaccg cagctgaacc cggaacacac cgtgcgtgag tccattgaag
    18061 aagcggtttc tgaagtggtt aacgccctga aacgcctgga tgaagtgtat gcgctgtacg
    18121 ccgatccgga tgccgatttt gacaagctgg ccgctgaaca aggccgtctg gaagagatca
    18181 ttcaggctca cgacggtcat aacctgaacg tacagctgga gcgtgcggcg gatgcgctac
    18241 gtctgccgga ctgggacgcg aaaatcgcta acctctccgg tggtgagcgt cgtcgcgtag
    18301 cgttgtgccg cctgctgctg gaaaaaccag acatgctgct gctcgacgaa ccgaccaacc
    18361 acctggatgc cgaatccgtg gcctggctgg aacgcttcct gcacgacttc gagggcaccg
    18421 tggtggcgat tacccacgac cgttacttcc tcgataacgt tgcaggctgg atcctcgaac
    18481 ttgaccgcgg tgaaggtatt ccgtgggaag gcaactactc ctcctggctg gagcagaaag
    18541 atcagcgcct ggcgcaggaa gcttcacaag aagcggcgcg tcgtaagtcg atcgagaaag
    18601 agctggagtg ggtacgtcag ggaactaaag gccgccagtc gaaaggtaaa gcacgtctgg
    18661 cacgctttga agagctgaac agcaccgaat atcagaaacg taacgaaacc aacgaactgt
    18721 ttattccacc tggaccgcgt ctgggcgata aagtgctgga agtcagcaac ctgcgtaaat
    18781 cctacggtga tcgcctgctg attgatgacc tgagcttctc gatcccgaaa ggggcaatcg
    18841 tcgggatcat cggtccgaac ggcgcgggta aatcgaccct gttccgtatg atctctggtc
    18901 aggaacagcc ggacagcggc accatcactt taggtgaaac ggtgaaactg gcatcggttg
    18961 atcagttccg tgactcaatg gataacagca aaaccgtttg ggaagaagtt tccggcgggc
    19021 tggatattat gaagatcggc aacaccgaga tgccaagccg cgcctacgtt ggccgcttta
    19081 actttaaagg ggttgatcag ggtaaacgcg ttggtgaact ttccggtggt gagcgcggtc
    19141 gtctgcatct ggcgaagctg ctgcaggttg gcggcaacat gctgctgctc gacgaaccaa
    19201 ccaacgacct ggatatcgaa accctgcgcg cgctggaaaa cgccctgctg gagttcccgg
    19261 gctgtgcgat ggttatctcg cacgaccgtt ggttcctcga ccgtatcgcc acgcacatcc
    19321 tggactacca ggatgaaggt aaagttgagt tcttcgaagg taactttact gagtacgaag
    19381 agtacaagaa acgcacgctg ggcgcagacg cactggagcc gaagcgtatc aagtacaagc
    19441 gtattgcgaa gtaatgcgta aaatgccgga tgcggcgtga acgccttatc cggcctacaa
    19501 accaagaaat ttcaatacgt tgtgaatctc caggcctgat aagacgcggt aagcgtcgca
    19561 tcaggcattg agcaccgaat gccggatacg gcgtgaacgc cttttccggc ctacaatagc
    19621 cttagtatcc gcaatttcgt agcgggtcac ccgtgctgat tcttttaaac cttgtttaat
    19681 ctcgacagcc tcttccagag aggttttcaa ctcatcaaaa aacttatttt atacctcgcc
    19741 tttgagccgt ttcatcgcgg ttatctctgc tcccccatca tctcccgcac cagctccacg
    19801 cagcgcagga aacggctgtc ataatcgtcc tcttcaaccc gcacgaattc gatattgttc
    19861 tcttccagca tctccaccag caagttctgg aactctttgc gatccaccga actgccgagg
    19921 ctgcgtaaac catccgccac ccacggcgtg ttgttctcca gcaggatcac cagatcgaaa
    19981 cggtattcat caatcaacgc ctgtacgaac ggatgctcac gcccttcgta ctttttgcag
    20041 aacgcctggg tagtgacaaa atcagtgtca ataaacgcca ctttattggc atatttcact
    20101 gcaaaatcaa tgtattgtgc gtggcccagc gcgattttat cgtaatcgga atactgcaat
    20161 gcgatctcat caccgccgag gtgtgaaaag acataatcgc gaccatattc ccacgcactg
    20221 gtggtattga agatattggc aagtttgttt accagggtgg atttaccgct cgactcgcca
    20281 ccaaggatcg ccacggtacg tacaaagaac ggcttcactt ccgtaggaat atattcccag
    20341 tagcggaacg ggttttcgcg gatctgcgca ccgctgatac tcataaaggt acgtttcgga
    20401 tcgaccagca ccgtatcgat ccccagatgt tccatatact gtggcgcatc ggcttcttcc
    20461 gaggtgtaga tcaggtccgg ctgaatcccc ttttcagcca taaacttttt gatgccgttg
    20521 ctccacacat cccagccgtg cggatacggc tccatgccct cctcgttgaa agcatgaatg
    20581 cgaatatttt tctgatattt aaaagtttgt aataaccagc gcagacgatc cggcaccgtg
    20641 ggctgctgcg acatggcgct gtcttcaaac aacgcgcggt cgcgggtatc gtcaaaaccc
    20701 ataatgatat gcagctcgtc aacctggcta caggcgcgct ggataaggta gatatgtccg
    20761 gtatgcagcg ggtagaactt accgaatacg acaccaatgg ttttcttctg tcggggaaat
    20821 tcaagcccca aaaaacggtg caacgcctcc agcttttgcg cgctggggct tttaattttg
    20881 gcattcagta actggcttaa ataccctttg gtcataccgc tggcatcagc tacctgctgt
    20941 agcgtgcagc cctgttgctt gatggcagtt ttcaggtaat caaatgacga catatctccc
    21001 tccgtatctc tcattataag tcgtcgaaca cgctaagcgc gtcggagagt tttttaacgc
    21061 caaaaatctg catcccttcc ggcgcttttt tcggtacgtt agccgccgga acaatcgccc
    21121 ggcgaaaacc gtgtttcgcc gcttctgaaa ttcgttcctg accgctgggc accgggcgga
    21181 tctcccctgc cagcccgact tcaccaaaca ccaccagatc ctgtggcagc ggtctgtcac
    21241 gcaggctgga aaccatcgcc agcagtaacg ctaaatcggc actggtttcg gttaccttca
    21301 cgccgccgac cacgttcaca aatacatcct gatcggccat ttgcagacca ccgtgacggt
    21361 gcaagacagc cagcaggatt gccagacggt tttgttccag ccccactgcc acgcggcgcg
    21421 gattcgccat catcgagtga tcgaccagcg cctgaatctc caccagcaac ggacgcgttc
    21481 cttcccacac caccatcacg gagctgccgg aggtcacttc atctccgcga cttaagaaaa
    21541 ttgccgaagg gttgctgact tcacgcagcc cctgttcggt catcgcgaag acgcccagct
    21601 cattcaccgc gccgaagcgg tttttatggc tgcgcaaggt gcgaaaacgg gagtcggcat
    21661 caccatccag aagcaccgaa cagtcgatac agtgttccag cactttaggg ccagccagcg
    21721 agccatcttt ggttacgtgc ccaaccatga caatcgccac accgcgcgtt ttggcgaagc
    21781 gcgtcagata agccgccgtt tcacgcacct gcgccacgct accaggcgat gattgtacat
    21841 ccgccatatg catcacctgg atcgagtcaa ttaccatcag tttcggttgc tcttcttcgg
    21901 caatcaggca gatctgttcg atgctggttt ccgacaacat attgagattg tcagtcggca
    21961 ggccaaggcg atgagcgcgc attgccacct gttgcagcga ctcttcgcca gtgacataca
    22021 gcgttttcat ctgctgggcc agtttgcaca gcgtttgcag tagcagcgtg gatttccccg
    22081 cacctgggtt accgccaatc agaatggcgc ttcccggcac cacgccgccg cctagtacgc
    22141 ggtcgaactc tttaaatccg gtggaaaaac gcggcagctc ttcaaggctg atatcggaga
    22201 gtttctggac ttttgccacc ccggcgctac cggcatagcc gctgagacgc tcgttacgcg
    22261 ccaccgttgg cgacgcagca agacgcacct cggtgatggt gttccaggca tgacaggcac
    22321 tgcactgccc ctgccagcgc ggataatcgg ccccgcattc attacaaaca aaggcgcgtt
    22381 ttggagcttt tgccacggtg tacctcgtta atgctgtgcc gcccgcagga tggcgggcga
    22441 gcaattactt ctgattcagg ctgccagaga ggatgcagaa tacccccatc aggtcagcgt
    22501 gacggatggt gacttccgcc ttttcattca cttttggctt ggcatggtag gcaatcccca
    22561 gccctgctgc tttgatcatc ggcaggtcat tagctccatc gccaatcgcc acggtctgcg
    22621 ccagcgggat ttcatactcc tgcgcgaggc gagtcaaagt tttcgctttg tactgcgcgt
    22681 ctacgatgtc gccgatcaca ttgccggtaa atttaccgtc catgatctcc agttcattgg
    22741 ctaccacggc ggtcaggcgc agcttgtcgc gcagatattc agcaaagaaa gtaaagccgc
    22801 cggaggcaat cgccactttc cagcccagcg tttccagctt gagcaccagt tgcgttaagc
    22861 ctggcatcag cggcagattt tcacgcacct gttgcagaat attggcgtca gcgcctttca
    22921 gcgtcgccac acggctgcgc aggctggcgg taaaatcgag ttcgccgcgc atcgcccgtt
    22981 cggttacttc cgccaccatc tcgcccgttc cggccagttt ggcaatttca tcaatacatt
    23041 caatctggat ggcggtggaa tccatgtcca tcaccagcaa acccggcgtg cgcaggtgcg
    23101 ggattttccc cagcggggcg acatccagtt gcgcttcatg ggccaggcgc gtagcccgtg
    23161 cggtgagtga acctgccaga cgaatcacct gataatcttc cacgcaccag gcggcaacaa
    23221 tcaccatcgc cgcacccagt ttgctctggt attgggtcag acgctgttta tccagcccac
    23281 gaccatacag cagccagccg ctacgacctg cgtggtaatc cagtggcatc acttcatcac
    23341 cacttaatga aagaggcaga ccaggccata aagagacatc ttcaggcagg tcgcaccagg
    23401 taatgttagg cattaaggat cctgtaaaat cgttcgaagc agggaaaata acgcatgagg
    23461 ctaccttgta tccattgctt ctggcaacat taagtctcaa attttcaaag ggtggaagat
    23521 ggctcgcaca aaactgaaat tccggctgca tcgggcagtg attgtcctgt tctgtcttgc
    23581 cttgttagtg gcgctgatgc agggagcgtc atggtttagt caaaaccacc agcgacaacg
    23641 taatccacag ctggaagaac tggcccgcac cctggcgcgt caggtaacgc tgaacgttgc
    23701 accgctgatg cgtaccgact caccggatga aaaacgcatt caggcgatcc tcgatcagtt
    23761 aacggatgaa agccgtatcc tcgacgcggg tgtgtatgac gaacaaggcg atcttatcgc
    23821 acgttctggc gaaagcgtcg aagtgcgcga ccggctggcg ctcgacggta aaaaagcggg
    23881 cggctatttt aaccagcaga ttgtcgaacc aattgccggg aaaaacggac cgctcggcta
    23941 tctgcgcctg acgctcgaca cccatacgct cgccaccgaa gcccaacagg tggataacac
    24001 cactaacatt ttacgcctga tgttgctgct ttcactggca atcggcgtag tgctgacccg
    24061 cacgctgcta cagggtaaac gtacccgctg gcagcaatcg cccttcctgt taaccgccag
    24121 caaaccggtg ccggaagagg aagaaagcga gaaaaaagag tgacccatta ctacaagaaa
    24181 ggaaatcgtt atgtccacat tacgcctgct catctctgac tcttacgacc cgtggtttaa
    24241 cctggcggtg gaggagtgta tttttcgcca gatgcccgcc acgcagcgcg ttctgtttct
    24301 ctggcgcaat gccgacacgg tagtgattgg tcgcgcgcag aacccgtgga aagagtgtaa
    24361 tacccggcgg atggaagaag ataacgtccg cctggcacgg cgcagtagcg gtggcggcgc
    24421 ggtgttccac gatctcggca atacctgctt tacctttatg gctggcaagc cggagtacga
    24481 taaaaccatc tccacgtcga ttgtgctcaa tgcgctgaac gcgcttggcg tcagcgccga
    24541 agcgtccggg cgtaacgatc tggtggtgaa aaccgccgaa ggcgaccgca aagtctcagg
    24601 atcggcctat cgcgaaacca aagatcgtgg cttccaccac ggcaccttgc tgctcaatgc
    24661 cgaccttagc cgcctggcaa actatctcaa tccggataaa aagaaactgg cggcgaaagg
    24721 cattacctca gtgcgttccc gcgtgaccaa cctcaccgag ctgctgccgg ggatcaccca
    24781 tgagcaggtt tgcgaggcca taaccaaggc ctttttcgcc cattatggcg agcgtgtaga
    24841 agcggaaatc atctccccgg acaaaacgcc agacttgcca aacttcgccg aaatctttgc
    24901 ccgtcagagt agctgggaat ggaacttcgg tcaggctccg gcattctcgc atctgctgga
    24961 tgaacgcttt agctggggcg gcgtggaact gcatttcgac gttgaaaaag gccatatcac
    25021 ccgcgcccag gtgtttaccg acagcctcaa ccccgcgccg ctggaagccc tcgccgggcg
    25081 actgcaaggc tgcctgtacc gcgcggatat gctgcaacaa gagtgcgaag cgctgttggt
    25141 tgacttcccg gaccaggaaa aagagctacg ggagttgtcg acgtggatag cgggggcggt
    25201 aaggtaactc gctgattaaa ataccaaagg aagggaatat gatcgatctg gaaaaccagg
    25261 agcgggagat tatcaattta atgttaagcc agcgtatttc ctggctagcc gccgtgcgta
    25321 tcaggcataa attatcgctt gctgaagtaa gtaaaatgtt aggtatctcg attaattctc
    25381 taaaatagat cgaaaagacg gaacggttta gctcaaacat caaaagcaaa atggcagaaa
    25441 tttatggttg tccaccagag ttgctgatat gcccttcctg gatgacggct gaacataaat
    25501 gaatagatt
//
LOCUS       DADMIB010000045        25141 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.045, whole genome shotgun sequence.
ACCESSION   DADMIB010000045 DADMIB010000000
VERSION     DADMIB010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25141
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.045"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..403)
                     /locus_tag="JNZ89_001753"
     CDS             complement(<1..403)
                     /locus_tag="JNZ89_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY8935664.1"
                     /translation="MDTTLPFLILYACLSALLFFWDAKHGLLPDRFTCPLLWSGLLFY
                     QVCHPDGLADALWGTIVGYGTFAVIYWGYRILRHKEGLGYGDVKFLAALGAWHSWAFL
                     PRLVFLAASFACGAVVIGLLMRGKESLKNPLP"
     gene            782..1093
                     /gene="rpsJ"
                     /locus_tag="JNZ89_001754"
     CDS             782..1093
                     /gene="rpsJ"
                     /locus_tag="JNZ89_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HAY8935665.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            1126..1755
                     /gene="rplC"
                     /locus_tag="JNZ89_001755"
     CDS             1126..1755
                     /gene="rplC"
                     /locus_tag="JNZ89_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HAY8935666.1"
                     /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
                     YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA
                     DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
                     MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA"
     gene            1766..2371
                     /gene="rplD"
                     /locus_tag="JNZ89_001756"
     CDS             1766..2371
                     /gene="rplD"
                     /locus_tag="JNZ89_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HAY8935667.1"
                     /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
                     AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
                     GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
                     ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
     gene            2368..2670
                     /gene="rplW"
                     /locus_tag="JNZ89_001757"
     CDS             2368..2670
                     /gene="rplW"
                     /locus_tag="JNZ89_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HAY8935668.1"
                     /translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK
                     AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
     gene            2688..3509
                     /gene="rplB"
                     /locus_tag="JNZ89_001758"
     CDS             2688..3509
                     /gene="rplB"
                     /locus_tag="JNZ89_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HAY8935669.1"
                     /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN
                     NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
                     YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
     gene            3526..3804
                     /gene="rpsS"
                     /locus_tag="JNZ89_001759"
     CDS             3526..3804
                     /gene="rpsS"
                     /locus_tag="JNZ89_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HAY8935670.1"
                     /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
                     IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
     gene            3819..4151
                     /gene="rplV"
                     /locus_tag="JNZ89_001760"
     CDS             3819..4151
                     /gene="rplV"
                     /locus_tag="JNZ89_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HAY8935671.1"
                     /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
                     VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            4169..4870
                     /gene="rpsC"
                     /locus_tag="JNZ89_001761"
     CDS             4169..4870
                     /gene="rpsC"
                     /locus_tag="JNZ89_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HAY8935672.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
                     KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
                     IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
                     EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
                     KPAAQPKKQQRKGRK"
     gene            4883..5293
                     /gene="rplP"
                     /locus_tag="JNZ89_001762"
     CDS             4883..5293
                     /gene="rplP"
                     /locus_tag="JNZ89_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HAY8935673.1"
                     /translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR
                     QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
     gene            5293..5484
                     /gene="rpmC"
                     /locus_tag="JNZ89_001763"
     CDS             5293..5484
                     /gene="rpmC"
                     /locus_tag="JNZ89_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HAY8935674.1"
                     /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
                     QVRRDVARVKTLLNEKAGA"
     gene            5484..5738
                     /gene="rpsQ"
                     /locus_tag="JNZ89_001764"
     CDS             5484..5738
                     /gene="rpsQ"
                     /locus_tag="JNZ89_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HAY8935675.1"
                     /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL
                     HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
     gene            5903..6274
                     /gene="rplN"
                     /locus_tag="JNZ89_001765"
     CDS             5903..6274
                     /gene="rplN"
                     /locus_tag="JNZ89_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013975775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HAY8935676.1"
                     /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
     gene            6285..6599
                     /gene="rplX"
                     /locus_tag="JNZ89_001766"
     CDS             6285..6599
                     /gene="rplX"
                     /locus_tag="JNZ89_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HAY8935677.1"
                     /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
                     HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET
                     IK"
     gene            6614..7153
                     /gene="rplE"
                     /locus_tag="JNZ89_001767"
     CDS             6614..7153
                     /gene="rplE"
                     /locus_tag="JNZ89_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HAY8935678.1"
                     /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
                     ADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
                     KSDEEGRALLAAFDFPFRK"
     gene            7168..7473
                     /gene="rpsN"
                     /locus_tag="JNZ89_001768"
     CDS             7168..7473
                     /gene="rpsN"
                     /locus_tag="JNZ89_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HAY8935679.1"
                     /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
                     VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            7507..7899
                     /gene="rpsH"
                     /locus_tag="JNZ89_001769"
     CDS             7507..7899
                     /gene="rpsH"
                     /locus_tag="JNZ89_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HAY8935680.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
                     FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            7912..8445
                     /gene="rplF"
                     /locus_tag="JNZ89_001770"
     CDS             7912..8445
                     /gene="rplF"
                     /locus_tag="JNZ89_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HAY8935681.1"
                     /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
                     HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
                     INLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
                     GVRYADEVVRIKEAKKK"
     gene            8455..8808
                     /gene="rplR"
                     /locus_tag="JNZ89_001771"
     CDS             8455..8808
                     /gene="rplR"
                     /locus_tag="JNZ89_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HAY8935682.1"
                     /translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG
                     SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
                     VQALADAAREAGLQF"
     gene            8823..9326
                     /gene="rpsE"
                     /locus_tag="JNZ89_001772"
     CDS             8823..9326
                     /gene="rpsE"
                     /locus_tag="JNZ89_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HAY8935683.1"
                     /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
                     RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
                     VEEILGK"
     gene            9330..9509
                     /gene="rpmD"
                     /locus_tag="JNZ89_001773"
     CDS             9330..9509
                     /gene="rpmD"
                     /locus_tag="JNZ89_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HAY8935684.1"
                     /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI
                     RGMINAVSFMVKVEE"
     gene            9513..9947
                     /gene="rplO"
                     /locus_tag="JNZ89_001774"
     CDS             9513..9947
                     /gene="rplO"
                     /locus_tag="JNZ89_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HAY8935685.1"
                     /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
                     GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIG
                     IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
     gene            9955..11286
                     /gene="secY"
                     /locus_tag="JNZ89_001775"
     CDS             9955..11286
                     /gene="secY"
                     /locus_tag="JNZ89_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HAY8935686.1"
                     /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
                     DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
                     AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA
                     VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
                     VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
                     AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
                     LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
                     DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
     gene            11318..11434
                     /gene="rpmJ"
                     /locus_tag="JNZ89_001776"
     CDS             11318..11434
                     /gene="rpmJ"
                     /locus_tag="JNZ89_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HAY8935687.1"
                     /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
     gene            11581..11937
                     /gene="rpsM"
                     /locus_tag="JNZ89_001777"
     CDS             11581..11937
                     /gene="rpsM"
                     /locus_tag="JNZ89_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HAY8935688.1"
                     /translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK
                     ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            11954..12343
                     /gene="rpsK"
                     /locus_tag="JNZ89_001778"
     CDS             11954..12343
                     /gene="rpsK"
                     /locus_tag="JNZ89_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HAY8935689.1"
                     /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
                     ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            12377..12997
                     /gene="rpsD"
                     /locus_tag="JNZ89_001779"
     CDS             12377..12997
                     /gene="rpsD"
                     /locus_tag="JNZ89_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HAY8935690.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR
                     KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
                     YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
                     LAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK"
     gene            13023..14012
                     /gene="rpoA"
                     /locus_tag="JNZ89_001780"
     CDS             13023..14012
                     /gene="rpoA"
                     /locus_tag="JNZ89_001780"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HAY8935691.1"
                     /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
                     NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
                     SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
                     RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
     gene            14053..14436
                     /gene="rplQ"
                     /locus_tag="JNZ89_001781"
     CDS             14053..14436
                     /gene="rplQ"
                     /locus_tag="JNZ89_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HAY8935692.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
                     RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRSEKAEAAAE"
     gene            14543..14911
                     /locus_tag="JNZ89_001782"
     CDS             14543..14911
                     /locus_tag="JNZ89_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1992 domain-containing protein"
                     /protein_id="HAY8935693.1"
                     /translation="MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELR
                     AGYRLLKNAGCLPPELEQRREAIQLLDILRGIRHDDPQYQEVSRRLSLLELKLRQAGF
                     STDFLRGDYADKLLDKINDN"
     gene            14922..15347
                     /gene="zntR"
                     /locus_tag="JNZ89_001783"
     CDS             14922..15347
                     /gene="zntR"
                     /locus_tag="JNZ89_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(2+)-responsive transcriptional regulator"
                     /protein_id="HAY8935694.1"
                     /translation="MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESD
                     LQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS
                     MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC"
     gene            15403..15621
                     /gene="arfA"
                     /locus_tag="JNZ89_001784"
     CDS             15403..15621
                     /gene="arfA"
                     /locus_tag="JNZ89_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HAY8935695.1"
                     /translation="MSRYQHTKGQIRDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGK
                     HGNRGNWEASGKKVNHFFTTGLLLSGAC"
     gene            complement(15618..16028)
                     /gene="mscL"
                     /locus_tag="JNZ89_001785"
     CDS             complement(15618..16028)
                     /gene="mscL"
                     /locus_tag="JNZ89_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HAY8935696.1"
                     /translation="MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
                     LGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKL
                     NRKKEEPAAAPAPTKEEVLLAEIRDLLKEQNNRS"
     gene            complement(16158..17534)
                     /gene="trkA"
                     /locus_tag="JNZ89_001786"
     CDS             complement(16158..17534)
                     /gene="trkA"
                     /locus_tag="JNZ89_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HAY8935697.1"
                     /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD
                     LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
                     DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
                     YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
                     RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYSVKLIERNQQRAAELAEKLQN
                     TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
                     YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
                     RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
                     FQPSPFFL"
     gene            complement(17556..18845)
                     /gene="rsmB"
                     /locus_tag="JNZ89_001787"
     CDS             complement(17556..18845)
                     /gene="rsmB"
                     /locus_tag="JNZ89_001787"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HAY8935698.1"
                     /translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL
                     QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET
                     VEGAIAIKRPQLKGLINGVLRQFQRQQEELLAKFNASDARYLHPSWLLKRLQKAYPEQ
                     WQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH
                     ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV
                     DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRHH
                     PDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQR
                     TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK"
     gene            complement(18891..19838)
                     /gene="fmt"
                     /locus_tag="JNZ89_001788"
     CDS             complement(18891..19838)
                     /gene="fmt"
                     /locus_tag="JNZ89_001788"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HAY8935699.1"
                     /translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG
                     KKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEM
                     PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT
                     AEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWS
                     LSAAQLERYIRAFNPWPMSWLEIERQPVKVWKASVIDTATNAAPGTILEANKQGIQVA
                     TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLA"
     gene            complement(19853..20362)
                     /gene="def"
                     /locus_tag="JNZ89_001789"
     CDS             complement(19853..20362)
                     /gene="def"
                     /locus_tag="JNZ89_001789"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HAY8935700.1"
                     /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
                     IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
                     RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE
                     KLDRLKARA"
     gene            20492..21616
                     /gene="dprA"
                     /locus_tag="JNZ89_001790"
     CDS             20492..21616
                     /gene="dprA"
                     /locus_tag="JNZ89_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HAY8935701.1"
                     /translation="MVDTDIWLRLMSISSLYGDDMVRIAHWLAKQSHIDAVVLQQTGL
                     TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL
                     YALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN
                     GVSIAVLGNGLNTIHPRRHARLATSLLEHGGALVSEFPLDVSPLAYNFPRRNRIISGL
                     SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP
                     EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP
                     VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV"
     gene            21588..22061
                     /locus_tag="JNZ89_001791"
     CDS             21588..22061
                     /locus_tag="JNZ89_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HAY8935702.1"
                     /translation="MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNAL
                     LWLEKLADYQEGLTEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLEI
                     REMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
     gene            22090..22632
                     /locus_tag="JNZ89_001792"
     CDS             22090..22632
                     /locus_tag="JNZ89_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935703.1"
                     /translation="MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYV
                     RPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDET
                     AITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKT
                     AQGVKHFCASKQCGKPVSAE"
     gene            22637..23209
                     /gene="tsaC"
                     /locus_tag="JNZ89_001793"
     CDS             22637..23209
                     /gene="tsaC"
                     /locus_tag="JNZ89_001793"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase type 1
                     TsaC"
                     /protein_id="HAY8935704.1"
                     /translation="MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVM
                     RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPAT
                     TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA
                     AFPVVLGETGGRLNPSEIRDALTGELFRQG"
     gene            23214..24032
                     /gene="aroE"
                     /locus_tag="JNZ89_001794"
     CDS             23214..24032
                     /gene="aroE"
                     /locus_tag="JNZ89_001794"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HAY8935705.1"
                     /translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI
                     NTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLQGDNTD
                     GIGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK
                     LFAHTGSIQALGMDELEGHEFDLIINATSSGISGDIPAIPSSLIHLGIYCYDMFYQKG
                     KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA"
     gene            24029..24286
                     /locus_tag="JNZ89_001795"
     CDS             24029..24286
                     /locus_tag="JNZ89_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HAY8935706.1"
                     /translation="MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRF
                     TGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP"
     gene            complement(24262..24816)
                     /locus_tag="JNZ89_001796"
     CDS             complement(24262..24816)
                     /locus_tag="JNZ89_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HAY8935707.1"
                     /translation="MSDVLRPYRDLFPQIGQRVMIDDSSVVIGGVRLADDVGIWPLVV
                     IRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGN
                     RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAG
                     LRYSANNYVKWKDEYLDQGNQTQP"
BASE COUNT         6421 a         5976 c         6549 g         6195 t
ORIGIN      
        1 aaggcagcgg gttttttaat gattcttttc ctctcatgag cagaccaata actacggctc
       61 cgcaagcgaa tgaggcagca aggaaaacca gtcgtggtaa gaaggcccat gaatgccagg
      121 cgccaagggc ggcgagaaac ttcacatcac catagcctaa tccttcttta tgtcgcagta
      181 tgcgataccc ccagtaaatg acagcgaatg tgccgtaacc aacaattgtc ccccataacg
      241 catcggctaa accatcagga tgacaaactt gatagaacaa aagacctgac cagagtaacg
      301 ggcacgtaaa tctgtcaggt aacaagccat gctttgcatc ccagaaaaaa agtagggctg
      361 ataaacaagc gtacaaaatc agaaagggaa gggtagtgtc cataaaacat cctctgtaat
      421 tggagtatca ccatcgaata actccggatg ctcagcaaca gagagagcgc tgatttgtta
      481 acctgattcc ggtgaaaaac gctatcttca caaccttaca aatttcgtgg aatgcagctc
      541 gcaatctgcg cgttgcgatt aatttctacc cgatgcttgc gtcaggctca gatttgcgta
      601 taatgcgcgg gcttgtcgta gttgacagca ggttcaatct gaacctcagt tagccgaatt
      661 tggctaccta acaatgctcc caatcgggga gctacgtaag aacggttaca ctctcccatc
      721 aatcgtaatg ggtctgagga gtaatcattt tcgtttataa aataattgga gctctggtct
      781 catgcagaac caaagaatcc gtatccgcct gaaagcgttt gatcatcgtc tgatcgatca
      841 agcaaccgcg gaaatcgtcg agactgccaa gcgcactggt gcgcaggtcc gtggtccgat
      901 cccgctgccg acacgcaaag agcgcttcac tgttctgatc tccccgcacg tcaacaaaga
      961 cgcgcgcgat cagtacgaaa tccgtactca cttgcgtctg gttgacatcg ttgagccaac
     1021 cgagaaaacc gttgatgctc tgatgcgtct ggatctggct gccggtgtag acgtgcagat
     1081 cagcctgggt taatcaggtc attgagcgat tgagaggttg aaacaatgat tggtttagtc
     1141 ggtaaaaaag tgggtatgac ccgtatcttc acagaagacg gcgtttctat cccagtaacc
     1201 gtaatcgaag ttgaagcaaa ccgcgttact caggttaaag acctggctaa cgatggctac
     1261 cgtgctattc aggtgaccac cggtgctaaa aaagctaacc gtgtgaccaa gcctgaagct
     1321 ggccacttcg ctaaagctgg cgtagaagct ggccgtggtc tgtgggaatt ccgcctggct
     1381 gaaggcgaag agttcactgt aggtcagagc attagcgttg aactgtttgc tgacgttaaa
     1441 aaagttgacg taactggcac ctctaaaggt aaaggtttcg caggtaccgt taagcgctgg
     1501 aacttccgta cccaggacgc tactcacggt aactccttgt ctcaccgcgt tccgggttct
     1561 atcggtcaga accagactcc gggcaaagtg ttcaaaggca agaaaatggc aggtcagatg
     1621 ggtaacgaac gtgtaaccgt tcagagcctt gacgtagtac gcgttgacgc tgagcgcaac
     1681 ctgctgctgg ttaaaggtgc tgtcccgggt gcaaccggta gcgacctgat cgttaaacca
     1741 gctgtgaagg cgtaaggaga tagcaatgga attagtattg aaagacgcgc agagcgcgct
     1801 gactgtttcc gaaactacct tcggtcgtga tttcaacgaa gcgctggttc accaggttgt
     1861 tgttgcttat gcagctggtg ctcgtcaggg tactcgtgct cagaagactc gtgctgaagt
     1921 aactggttcc ggtaaaaaac cgtggcgcca gaaaggcacc ggccgtgcgc gttctggttc
     1981 tatcaagagc ccgatctggc gttctggtgg cgtgaccttt gctgctcgtc cgcaggacca
     2041 cagtcaaaaa gttaacaaga agatgtaccg cggcgcgctg aaaagcatcc tgtccgaact
     2101 ggtacgtcag gatcgtctga tcgttgtcga gaagttctct gtagaagcgc cgaaaactaa
     2161 gctgctggca cagaaactga aagacatggc tctggaagat gtgctgatca tcaccggtga
     2221 gctggacgaa aacctgttcc tggctgcgcg caacctgcac aaggttgacg tacgcgatgc
     2281 aactggtatc gacccggtta gcctgatcgc cttcgacaaa gtcgtaatga ctgctgatgc
     2341 tgttaagcaa gttgaggaga tgctggcatg attcgtgaag aacgtctgct gaaggtgctg
     2401 cgtgcaccgc acgtttctga aaaagcgtct actgcgatgg aaaaatccaa caccatcgta
     2461 ctcaaagttg ctaaagacgc gaccaaagca gaaatcaaag ctgctgtgca gaaactgttt
     2521 gaagtcgaag tcgaagtcgt taacaccctg gtagttaaag ggaaagttaa acgtcacgga
     2581 cagcgtatcg gtcgtcgtag cgactggaaa aaagcttacg tcaccctgaa agaaggccag
     2641 aatctggact tcgttggcgg cgctgagtaa gtcggaggag taatacaatg gcagttgtta
     2701 aatgtaaacc gacatctccg ggtcgtcgcc acgtagttaa agtggttaac cctgagctgc
     2761 acaagggcaa accttttgct ccgttgctgg aaaaaaacag caaatccggt ggtcgtaaca
     2821 acaatggccg tatcaccact cgtcatatcg gtggtggcca caagcaggct taccgtattg
     2881 ttgacttcaa acgcaacaaa gacggtatcc cggcagttgt tgaacgtctt gagtacgatc
     2941 cgaaccgttc cgcgaacatc gcgctggttc tgtacaaaga cggtgaacgc cgttacatcc
     3001 tggcccctaa aggcctgaaa gctggcgacc agattcagtc tggcgttgat gctgcaatca
     3061 aaccaggtaa caccctgccg atgcgcaaca tcccggttgg ttctactgtt cataacgtag
     3121 aaatgaaacc aggtaaaggc ggtcagctgg cacgttccgc tggtacttac gttcagatcg
     3181 ttgctcgtga tggtgcttat gtcaccctgc gtctgcgttc tggtgaaatg cgtaaagtag
     3241 aagcagactg ccgtgcaact ctgggcgaag ttggcaatgc tgagcatatg ctgcgcgttc
     3301 tgggtaaagc aggtgctgca cgctggcgtg gtgttcgtcc gaccgttcgc ggtaccgcga
     3361 tgaacccggt agaccaccca catggtggtg gtgaaggtcg taactttggt aagcacccgg
     3421 taactccgtg gggcgttcag accaaaggta agaagacccg cagcaacaag cgtactgata
     3481 aattcatcgt acgtcgccgt agcaaataat tttagaggat aagccatgcc acgttctctc
     3541 aagaaaggtc cttttattga cctgcacttg ctgaagaagg tagagaaagc ggtggaaagc
     3601 ggagacaaga agcccctgcg cacttggtcc cgtcgttcaa cgatctttcc taacatgatc
     3661 ggtttgacca tcgctgtcca taatggtcgt cagcacgttc cggtatttgt aaccgacgaa
     3721 atggtcggtc acaaactggg tgaattcgca ccgactcgta cttatcgcgg ccacgctgct
     3781 gataaaaaag cgaagaagaa ataaggtagg aggaagagat ggaaactatc gctaaacatc
     3841 gccatgctcg ttcttctgct cagaaggttc gccttgttgc tgacctgatt cgcggtaaga
     3901 aagtgtcgca ggctctggat attttgacct acaccaacaa gaaagcggct gtactggtca
     3961 agaaagttct ggaatctgcc attgctaacg ctgaacacaa cgatggcgct gacattgacg
     4021 atctgaaagt tacgaaaatt ttcgtagacg aaggcccgag catgaagcgc attatgccgc
     4081 gtgcaaaagg tcgtgcagat cgcatcctga agcgcaccag ccacatcact gtggttgtgt
     4141 ccgatcgctg agactctgga gactagcaat gggtcagaaa gtacatccta atggtattcg
     4201 cctgggtatt gtaaaaccat ggaactctac ctggtttgcg aacaccaaag aattcgctga
     4261 caacctggac agcgatttta aagtacgtca gtacctgact aaggaactgg ctaaagcgtc
     4321 cgtatctcgt atcgttatcg agcgtccggc taagagcatc cgtgtaacca ttcacactgc
     4381 tcgcccgggt atcgttatcg gtaaaaaagg tgaagacgta gaaaaactgc gtaaggtcgt
     4441 agcggacatc gctggcgttc ctgcacagat caacatcgcc gaagttcgta agcctgaact
     4501 ggacgcaaaa ctggttgctg acagcatcac ttctcagctg gaacgtcgcg ttatgttccg
     4561 tcgtgctatg aagcgtgctg tacagaacgc aatgcgtctg ggcgctaaag gtattaaagt
     4621 tgaagttagc ggccgtctgg gcggcgcgga aatcgcacgt accgaatggt accgcgaagg
     4681 tcgcgtaccg ctgcacactc tgcgtgctga catcgactac aacacctctg aagcgcacac
     4741 cacttacggt gtaatcggcg ttaaagtgtg gatcttcaaa ggcgagatcc tgggtggtat
     4801 ggctgctgtt gaacaaccgg aaaaaccggc tgctcagcct aaaaagcagc agcgtaaagg
     4861 ccgtaaataa ggagcgtcgc tgatgttaca accaaagcgt acaaaattcc gtaaaatgca
     4921 caaaggccgt aaccgcggtc tggcgcaggg tacggatgtt agcttcggca gcttcggtct
     4981 gaaagctgtt ggccgtggtc gtctgactgc ccgtcagatc gaagcagcac gtcgtgctat
     5041 gacccgtgca gttaagcgtc aaggtaagat ctggatccgt gtgttcccgg acaaaccgat
     5101 cactgaaaag ccgctggcag tgcgtatggg taaaggtaaa ggtaacgtgg agtattgggt
     5161 tgccttgatt cagccgggta aagtcctgta tgaaatggac ggtgttccgg aagagctggc
     5221 ccgtgaagca ttcaagctgg cagcagcgaa actgccgatt aaaaccacct ttgtaactaa
     5281 gacggtgatg taatgaaagc aaaagagctg cgtgagaaga gcgttgaaga gctgaacacc
     5341 gagctgctga acctgctgcg tgagcagttc aacctgcgta tgcaggctgc aagtggccag
     5401 ctgcaacagt ctcacctgtt gaagcaagtg cgtcgcgatg tcgcacgcgt taagacttta
     5461 ctgaacgaga aggctggtgc gtaatgaccg ataaaatccg tactctgcaa ggtcgcgttg
     5521 ttagcgacaa aatggagaaa tccattgttg ttgctatcga acgttttgtg aaacacccga
     5581 tctacggtaa attcatcaag cgtacgacca aactgcacgt acatgacgag aacaacgaat
     5641 gcggtatcgg tgacgtggtt gaaatccgcg aatgccgtcc gctgtccaag actaaatcct
     5701 ggacgctggt tcgcgttgta gagaaagcgg ttctgtaata cagtacactc tctcgatacg
     5761 aataaacggc tcagaaatga gccgtttatt ttttctaccc atatccttga agcggtgtta
     5821 taatgccgcg ccctcgatat ggggattttt aacgacctga ttttcgggtc tcagtagtag
     5881 ttgacattag cggagcacta aaatgatcca agaacagact atgctgaacg tcgccgacaa
     5941 ctccggtgca cgtcgcgtaa tgtgtatcaa ggttctgggt ggctcgcacc gtcgctacgc
     6001 aggcgtaggc gacatcatca agatcaccat caaagaagca attccgcgtg gtaaggtcaa
     6061 aaaaggtgat gtgctgaagg cggtagtggt gcgcaccaag aagggtgttc gtcgcccgga
     6121 cggttctgtc attcgcttcg atggtaatgc ttgtgttctt ctgaacaaca acagcgagca
     6181 gcctatcggt acgcgtattt ttgggccggt aactcgtgag cttcgtagtg agaagttcat
     6241 gaaaattatc tctctggcac cagaagtact ctaaggagcg aatcatggca gcgaaaatcc
     6301 gtcgtgatga cgaagttatc gtgttaaccg gtaaagataa aggtaaacgc ggtaaagtta
     6361 agaatgtcct gtcttccggc aaggtcattg ttgaaggtat caacctggtt aagaaacatc
     6421 agaagccggt tccggccctg aaccaaccgg gtggcatcgt tgaaaaagaa gccgctattc
     6481 aggtttccaa cgtagcaatc ttcaatgcgg caaccggcaa ggctgaccgt gtaggcttta
     6541 gattcgaaga cggcaaaaaa gtccgtttct tcaagtctaa cagcgaaact atcaagtaat
     6601 ttggagtagt acgatggcga aactgcatga ttactacaaa gacgaagtag ttaaaaaact
     6661 catgactgag tttaactaca attctgtcat gcaagtccct cgggtcgaga agatcaccct
     6721 gaacatgggt gttggtgaag cgatcgctga caaaaaactg ctggataacg cagcagcaga
     6781 cctggcagca atctccggtc aaaaaccgct gatcaccaaa gcacgcaaat ctgttgcagg
     6841 cttcaaaatc cgtcagggct atccgatcgg ctgtaaagta actctgcgtg gcgaacgcat
     6901 gtgggagttc tttgagcgcc tgatcactat tgctgtacct cgtatccgtg acttccgtgg
     6961 cctgtccgct aagtctttcg acggtcgtgg taactacagc atgggtgtcc gtgagcagat
     7021 catcttccca gaaatcgact acgataaagt cgaccgcgtt cgtggtttgg atattaccat
     7081 taccactact gcgaaatctg acgaagaagg ccgcgctctg ctggctgcct ttgacttccc
     7141 gttccgcaag taaggtaggg ttactaaatg gctaagcaat caatgaaagc acgcgaagta
     7201 aaacgcgtag ctttagctga taaatacttc gcgaaacgcg ctgaactgaa agcgatcatc
     7261 tctgatgtga acgcttccga cgaagatcgt tggaacgctg ttctcaagct gcagactctg
     7321 ccgcgtgatt ccagcccgtc tcgtcagcgt aaccgctgcc gtcaaacagg tcgtccgcat
     7381 ggtttcctgc ggaagttcgg gttgagccgt attaaggtcc gtgaagccgc tatgcgcggt
     7441 gaaatcccgg gtctgaaaaa ggctagctgg taattgtcac caattgaatc acgggagtaa
     7501 agacagatga gcatgcaaga tccgatcgcg gatatgctga cccgtatccg taacggtcag
     7561 gccgcgaaca aagctgcggt caccatgcct tcctccaagc tgaaagtggc aatcgccaac
     7621 gtgctgaagg aagaaggttt tattgaagat tttaaagttg aaggcgacac caagcctgaa
     7681 ctggaactta ctctgaagta tttccagggc aaagctgttg tagaaagcat tcagcgtgtc
     7741 agccgcccag gtctgcgcat ctataaacgt aaagatgagc tgccgaaagt tatggcgggt
     7801 ctgggtatcg cagttgtttc tacctctaaa ggtgttatga ctgatcgtgc agcgcgccag
     7861 gctggtcttg gtggcgaaat tatctgctac gtagcctaat cggaggaaaa aatgtctcgt
     7921 gttgctaaag caccggtcgt tgttcctgcc ggcgttgacg taaaaatcaa cggtcaggtt
     7981 attacgatca aaggtaaaaa cggcgagctg actcgtactc tcaacgatgc tgttgaagtt
     8041 aaacatgcag ataataccct gaccttcggt ccgcgtgatg gttacgcaga cggttgggca
     8101 caggctggta ccgcgcgtgc cctgctgaac tcaatggtta tcggtgttac cgaaggcttc
     8161 actaagaagc tgcagctggt tggtgtaggt taccgtgcag cggttaaagg taatgtgatt
     8221 aacctgtctc tgggtttctc tcatcctgtt gaccatcagc tgcctgcggg tatcactgct
     8281 gaatgtccga ctcagactga aatcgtgctg aaaggcgctg ataagcaggt gatcggccag
     8341 gttgcagcgg atctgcgcgc ctaccgtcgt cctgagcctt ataaaggcaa gggtgttcgt
     8401 tacgccgacg aagtcgtgcg tatcaaagag gctaagaaga agtaaggtaa cactatggat
     8461 aagaaatctg ctcgtatccg tcgtgcgacc cgcgcacgcc gcaagctcca ggagctgggc
     8521 gcaactcgcc tggtggtaca tcgtaccccg cgtcacattt acgcacaggt aattgcaccg
     8581 aacggttctg aagttctggt agctgcttct actgtagaaa aagctatcgc tgaacaactg
     8641 aagtacaccg gtaacaaaga cgcggctgca gctgtgggta aagctgtcgc tgaacgcgct
     8701 ctggaaaaag gcatcaaaga tgtatccttt gaccgttccg ggttccaata tcatggtcgt
     8761 gtccaggcac tggcagatgc tgcccgtgaa gctggccttc agttctaagg tagaggtgta
     8821 agatggctca catcgaaaaa caagctggcg aactgcagga aaagctgatc gcggtaaacc
     8881 gcgtatctaa aaccgttaaa ggtggtcgta ttttctcctt cacagctctg actgtagttg
     8941 gcgatggtaa cggtcgcgtt ggttttggtt acggtaaagc gcgtgaagtt ccagcagcga
     9001 tccagaaagc gatggaaaaa gcccgtcgca atatgattaa cgtcgcgctg aataacggca
     9061 ctctgcaaca ccctgttaaa ggtgttcaca cgggttctcg cgtattcatg cagccggctt
     9121 ccgaaggtac cggtatcatc gccggtggtg caatgcgcgc cgttctggaa gtcgctgggg
     9181 ttcataacgt tctggctaaa gcatatggtt ccaccaaccc gatcaacgtg gttcgtgcaa
     9241 ctattgatgg cctggaaaat atgaactctc cagaaatggt cgctgccaag cgtggtaaat
     9301 ccgttgaaga aattctgggg aaataaacca tggcaaagac tattaaaatt actcaaaccc
     9361 gcagtgcaat cggtcgtctg ccgaaacaca aggcaacgct gcttggcctg ggtctgcgtc
     9421 gtattggtca caccgtagag cgcgaggata ctcctgctat tcgcggtatg atcaacgcgg
     9481 tttccttcat ggttaaagtt gaggagtaag agatgcgttt aaatactctg tctccggccg
     9541 aaggctccaa aaaggcgggt aaacgcttgg gtcgtggtat cggttctggc ctcggtaaaa
     9601 ccggtggtcg tggtcacaaa ggtcagaagt ctcgttctgg cggtggcgta cgtcgcggtt
     9661 tcgagggtgg tcagatgcct ctgtaccgtc gtctgccgaa attcggcttc acttctcgta
     9721 aagcagcgat tacagccgaa gttcgtctgt ctgacctggc taaagtagaa ggcggtgttg
     9781 tagacctgaa cacgctgaaa gcggctaaca ttatcggtat ccagatcgag ttcgcgaaag
     9841 tgatcctggc tggcgaagta acgactccgg taactgttcg tggcctgcgt gttactaaag
     9901 gcgctcgtgc tgctatcgaa gctgctggcg gtaaaatcga ggaataagta gcagatggct
     9961 aaacaaccgg gattagattt tcaaagtgcc aaaggtggct taggcgagct gaaacgcaga
    10021 ctgctgtttg ttatcggtgc gctgattgtg ttccgtattg gctcttttat tccgatccct
    10081 ggtattgatg ccgctgtact tgccaaactg cttgagcaac agcgaggcac catcattgag
    10141 atgtttaaca tgttctctgg tggtgctctc agccgtgctt ctatctttgc tctggggatc
    10201 atgccgtata tttcggcgtc gatcattatc cagctgctga cggtggttca cccaacgttg
    10261 gcggaaatta agaaagaagg ggagtctggt cgtcgtaaga tcagccagta cacccgctac
    10321 ggtactctgg tgctggcaat attccagtcg atcggtattg ctaccggtct gccgaatatg
    10381 cctggtatgc aaggcctggt gattaacccg ggctttgcat tctacttcac cgctgttgta
    10441 agtctggtca caggaacgat gttcctgatg tggttgggcg aacagatcac tgaacgaggt
    10501 atcggcaacg gtatttcaat cattatcttc gccggtattg tcgcgggact cccgccagcc
    10561 attgcccata ctatcgagca agcgcgtcaa ggcgacctgc acttcctcgt gttgctgttg
    10621 gttgcagtat tagtatttgc agtgacgttc tttgttgtat ttgttgagcg tggtcaacgc
    10681 cgcattgtgg taaactacgc gaaacgtcag caaggtcgtc gtgtctatgc tgcacagagc
    10741 acacatttac cgctgaaagt gaatatggcg ggggtaatcc cggcaatctt cgcttccagt
    10801 attattctgt tcccggcgac catcgcgtca tggttcgggg gcggtactgg ttggaactgg
    10861 ctgacaacaa tttcgctgta tttgcagcct gggcaaccgc tttatgtgtt actctatgcg
    10921 tctgcaatca tcttcttctg tttcttctac acggcgttgg ttttcaaccc gcgtgaaaca
    10981 gcagataacc tgaagaagtc cggtgcattt gtaccaggaa ttcgtccggg agagcaaacg
    11041 gcgaagtata tcgataaagt aatgacccgc ctgaccctgg ttggtgcgct gtatattacc
    11101 tttatctgcc tgatcccgga gttcatgcgt gatgcaatga aagtaccgtt ctacttcggt
    11161 gggacctcac tgcttatcgt tgttgtcgtg attatggact ttatggctca agtgcaaact
    11221 ctgatgatgt ccagtcagta tgagtctgca ttgaagaagg cgaacctgaa aggctacggc
    11281 cgataattgg tcgcccgaga agttacggag agtaaaaatg aaagttcgtg cttccgtcaa
    11341 gaaattatgc cgtaactgca aaatcgttaa gcgtgatggt gtcatccgtg tgatttgcag
    11401 tgccgagccg aagcataaac agcgccaagg ctgatttttt cgcatatttt tcttgcaaag
    11461 ttgggttgag ctggctagat tagccagcca atcttttgta tgtctgtgcg tttccatttg
    11521 agtatcctga aaacgggctt ttcagcatgg aacgtacata ttaaatagta ggagtgcata
    11581 gtggcccgta tagcaggcat taacattcct gatcataagc atgccgtaat cgcattaact
    11641 tcgatttatg gcgtcggcaa gacccgttct aaagccatcc tggctgcagc gggtatcgct
    11701 gaagatgtta agatcagtga gctgtctgaa ggacaaatcg acacgctgcg tgacgaagtt
    11761 gccaaatttg tcgttgaagg tgatctgcgc cgtgaaatca gcatgagcat caagcgcctg
    11821 atggatcttg gttgctatcg cggcttgcgt catcgtcgtg gtctcccggt tcgcggtcag
    11881 cgtaccaaga ccaacgcacg tacccgtaag ggtccgcgca aaccgatcaa gaaataatcg
    11941 gggtgattga ataatggcaa aggcaccaat tcgtgcacgt aaacgtgtaa gaaaacaagt
    12001 ctctgacggc gtggctcata tccatgcttc tttcaacaac accatcgtga ctatcactga
    12061 tcgtcagggt aacgcgttgg gttgggcaac agccggtggt tccggtttcc gtggttctcg
    12121 caaatccact ccgtttgcag ctcaggttgc agcagagcgt tgcgctgacg ccgtgaaaga
    12181 atacggcatc aagaatctgg aagttatggt taaaggtccg ggtccaggcc gcgaatctac
    12241 tattcgtgct ctgaacgccg caggtttccg catcactaac attactgatg tgactccgat
    12301 ccctcataac ggttgtcgtc cgccgaaaaa acgtcgcgta taacgcctcg ttttccaggt
    12361 ttgttggaga aagaaaatgg caagatattt gggtcctaag ctcaagctga gccgtcgtga
    12421 gggcaccgac ttattcctta agtctggcgt tcgcgcgatc gataccaagt gtaaaattga
    12481 acaagctcct ggccagcacg gtgcgcgtaa accgcgtctg tctgactatg gtgtgcagtt
    12541 gcgtgaaaag caaaaagttc gccgtatcta tggtgtgctg gagcgtcagt tccgtaacta
    12601 ctacaaagaa gcagcacgtc tgaaaggcaa caccggtgaa aacctgttgg ctctgctgga
    12661 aggtcgtctg gacaacgttg tataccgtat gggcttcggt gccactcgtg cagaagcacg
    12721 tcagctggtt agccataaag caattatggt aaacggtcgt gttgttaata tcgcttctta
    12781 tcaggttagt ccgaatgacg ttgtaagcat tcgtgagaaa gcgaagaagc agtctcgcgt
    12841 gaaagccgct ctggagctgg ctgagcagcg tgaaaagcca acttggctgg aagttgatgc
    12901 tggcaagatg gaaggtacgt ttaagcgtaa gccggagcgt tctgatctgt ctgcggacat
    12961 taacgaacac ctgatcgtcg agctttactc caagtaaagc ttagtaccaa agagaggaca
    13021 caatgcaggg ttctgtgaca gagtttctaa aaccgcgcct ggttgatatc gagcaagtga
    13081 gttcgacgca cgccaaggtg acccttgagc ctttagagcg tggctttggc catactctgg
    13141 gtaacgcact gcgccgtatt ctgctctcat cgatgccggg ttgcgcggtg accgaggttg
    13201 agattgatgg tgtactacat gagtacagca ccaaagaagg cgttcaggaa gatatcctgg
    13261 aaatcctgct caacctgaaa gggctggcgg tgagagttca gggcaaagat gaagttattc
    13321 ttaccttgaa taaatctggc attggccctg tgactgcagc cgatatcacc cacgacggtg
    13381 atgtcgaaat cgtcaagccg cagcacgtga tctgccacct gaccgatgag aacgcgtcta
    13441 ttagcatgcg tatcaaagtt cagcgcggtc gtggttatgt gccggcttct acccgaattc
    13501 attcggaaga agatgagcgc ccaatcggcc gtctgctggt cgacgcatgc tacagccctg
    13561 tggagcgtat tgcctacaat gttgaagcag cgcgtgtaga acagcgtacc gacctggaca
    13621 agctggtcat cgaaatggaa accaacggca caatcgatcc tgaagaggcg attcgtcgtg
    13681 cggcaaccat tctggctgaa caactggaag ctttcgttga cttacgtgat gtacgtcagc
    13741 ctgaagtgaa agaagagaaa ccagagttcg atccgatcct gctgcgccct gttgacgatc
    13801 tggaattgac tgtccgctct gctaactgcc ttaaagcaga agctatccac tatatcggtg
    13861 atctggtaca acgtaccgag gttgagctcc ttaaaacgcc taaccttggt aaaaaatctc
    13921 ttactgagat taaagacgtg ctggcttccc gtggactgtc tctgggcatg cgcctggaaa
    13981 actggccacc ggcaagcatc gctgacgagt aaccggatca caggttaagg ttttactgag
    14041 aaggataagg tcatgcgcca tcgtaagagt ggtcgtcaac tgaaccgcaa cagcagccat
    14101 cgccaggcta tgttccgcaa tatggcaggt tcactggttc gtcatgaaat catcaagacg
    14161 actctgccta aagcgaaaga gctgcgccgc gtagttgagc cgctgattac tcttgccaag
    14221 actgatagcg ttgctaatcg tcgtctggca ttcgcccgta ctcgtgataa cgagatcgtg
    14281 gcaaaactgt ttaacgaact gggcccgcgt ttcgcgagcc gtgccggtgg ttacactcgt
    14341 attctgaagt gtggcttccg tgcaggcgac aacgcgccga tggcttacat cgagctggtt
    14401 gatcgttcag agaaagcaga agctgctgca gagtaatctg aagcaacgta aaaaaacccg
    14461 ccccggcggg tttttttata cccgtagcat ccccacttat ctacaatagc tgtactcttt
    14521 ttgttcatcc cctggagtat ttatgtggtt acttgaccag tgggcagagc gtcatatagc
    14581 agaagcgcaa gcgaaaggtg agtttgataa tctggcaggt agcggcgaac cattgatact
    14641 ggatgatgat tctcatgtgc caccggaatt acgtgcgggg tatcgcttgc tgaagaatgc
    14701 tggttgctta ccgccagaac ttgagcagcg gagggaagca attcagcttc tggatatcct
    14761 gagaggtatc cgtcacgatg atccgcaata tcaagaggtt agccgtcgat tgtcattact
    14821 ggaattgaag ctgcgacaag ctggatttag taccgatttt ttacgcggcg attatgctga
    14881 caagttgttg gacaaaatca acgataacta gtggagtatg tatgtatcgc attggtgagc
    14941 tggcaaaaat ggcggaagta acacctgaca cgattcgtta ttacgaaaaa cagcagatga
    15001 tggagcatga agtgcgtact gaaggcgggt ttcgcctgta taccgaaagc gatctccagc
    15061 gattgaaatt tatccgccat gccagacaac taggtttcag tctggagtcg atccgcgagt
    15121 tgctgtcgat ccgcatcgat cctgaacacc atacctgtca ggagtcaaaa ggcattgtgc
    15181 aggaaagatt gcaggaagtc gaagcacgga tagccgagtt gcagagtatg cagcgttcct
    15241 tgcaacgcct taacgatgcc tgttgtggga ccgcccatag cagtgtttat tgttcgattc
    15301 ttgaagctct tgaacaaggg gcgagtggcg ttaagagtgg ctgttgattt tttgcactgg
    15361 caggattaca ctcgcgccgt aaaataacca attggagttt ttatgagccg atatcagcat
    15421 actaaagggc agataaggga taatgcgata gaagcattac tacatgatcc cttattccga
    15481 cagcgcgtag agaaaaataa gaaggggaaa ggcagttaca tgcgaaaagg aaaacatggc
    15541 aatcggggga actgggaggc cagtggcaag aaagtaaatc acttttttac cactggtctt
    15601 ctgctttcag gcgcttgtta agagcggtta ttctgctctt tcagcaaatc acgaatttct
    15661 gccagtaata cttcttcttt agttggtgca ggtgcggcag ctggttcttc ttttttccga
    15721 ttcagtttgt tgattagctt aatcgccata aagatggcaa aggccacaat cagaaaatca
    15781 aagacgtttt gaatgaagac accgtaatgc atcacaacag cagggatatc cccctgcgca
    15841 tcgcgtagcg tgacagcaaa ctgtttaaag tcgatcccgc caattaataa gcccagaggt
    15901 ggcatgatga tatcggcaac cagtgaagat acaatcttcc cgaatgccgc accgataatg
    15961 acacccaccg ccaaatccac cacgttcccg cgcatcgcaa attcgcgaaa ttctttaata
    16021 atgctcatgt tattctccct atgaagccga caaccataag tctaacaaat gttaagccat
    16081 tttcctgcca ggaatgaatt taattaatcc ttgataatca aagggaaata ataaggcgtc
    16141 attagacgcc ttattaatta caagaagaaa gggcttggct ggaagagtct ttcgacgtcg
    16201 gtaataaact ttttatctgt gaggaacata attacgtgat cgccttgctc aatgcgcaga
    16261 ttgtcattgg caatcatcac gtcgtttcca cgtaccaccg ctccaataat cgttcctggc
    16321 ggtagcttga tttcgtcaat gactctgccg acaacgcgtg aggtgctttc atcaccgtga
    16381 gcaacggctt caatagcttc tgctacgccg cggcgcaatg aggaaacacc aacaatatct
    16441 gcttttcgca catggctaag caacgcagaa atagttgctt gttgtggtga aattgcaata
    16501 tcgatcacgc tcccctgaac cagatccaca taagcgcgac gctggatcaa taccatcacc
    16561 tttttcgcac ccatacgttt ggcaagcatg gcggacatga tattggcctc gtcatcgttg
    16621 gtgacggcaa taaacagatc aacttgatcg atatgttctt cggccagcag ttcttgatcc
    16681 gacgcatcac caaaaaagac gatcgtattc tgcaactttt ccgccagttc ggcagcgcgc
    16741 tgctgattac gttcgatgag tttaacgctg taatcttttt ccagacgacg cgccagccct
    16801 gcaccgatat taccgccacc aaccagcatg atccgcttat acggtttttc cagtcgctgt
    16861 aattcactca tcaccgcgcg gatatgctgt gaagcggcaa taaagaacac ttcatcacca
    16921 gcttcaacaa tggtcgaacc ttgtggacga atggggcgat cgtggcggaa aattgctgcc
    16981 acacgagtat cgatatgtgg catatgttcg cgcatggtcg aaagtgcatt accaatcagc
    17041 gggccgccat aataggcttt aactacagcg aggctgactt taccctcagc gaagttcacc
    17101 acctgcaatg cgcctggata ctcaatcagt cggtaaatat tatcgataac caactgctct
    17161 ggtgcgatca gatgatcaat cggtacagca tctgaatgaa atagcttatc ggcatcgcgt
    17221 acgtagtctg gtgagcggat gcgagcgatg cgattagggg tgttgaaaag tgagtaggct
    17281 acctggcagg caaccatatt ggtttcatct gaactggtta cagcaaccag catatcggcg
    17341 tcgtcggcac ctgcctcccg caatacgcgt ggatgagagc catgcccctg cacgactcgc
    17401 aggtcaaatt tatcctgcaa ggtccgcaga cgctcaccgt tggtatcgac aacagtaata
    17461 tcgttgttct cgccaaccag gttttccgcc agtgtgccgc caacctggcc ggcacccaga
    17521 atgataattt tcatcagtct cgacccgtta tctcatcact ttttgattag cttagcgtaa
    17581 aagaagccgt cgccctcttc ggcaccaggc agattttgtt tacccggttg ctctggtgtt
    17641 cctgtttcgc aaagttcggc atcagcggta cgttgcaaaa aagctttaat ctgcaggcta
    17701 ttctcttccg gtaacaccga acaggtggca tagaccaggg ttccaccgga ttttaaatgc
    17761 ggccaaatgg cgtcgagaat ttcagactgc aattgcgcga gttccgggat atcgcgatcg
    17821 cgacgtaacc atttaatatc cggatggtga cgaatcaccc ccgttgctga acaaggcgca
    17881 tctaataaaa tgcgatcaaa ctgttgctcg ccacaccatt gggaagggta acggccatca
    17941 ccttgtttca cggttgcctt cataccaagg cgttttaaat tgtcgtaaac gcgagagagg
    18001 cgctgttcgt caatatcaac cgcaacaacc tgcgcttctg gtgccacctc aaggatatgc
    18061 gttgttttac cgccgggggc ggcacaaaga tccagaatgt gttcaccgtt ttgtggcgca
    18121 agccaggtca tgcaaccttg tgctgatgca tcctgaacgg taacccatcc gtcttcaaaa
    18181 ccaggtagcg catgaacagg tgcaggtgtt tccagacgta cagcatcagg gtaatccgca
    18241 tgcgggaaac ctttcattcc tgcttcatcc agcaatgcaa gccagctgtc gcgggaatga
    18301 tgcgtacgat taacgcgcag ccacattggc ggacgctggt tattggcttc gacgatggat
    18361 tgccactgct ctggatacgc tttttgcaga cgcttcagca accaggaagg atgcagataa
    18421 cgtgcatcac tggcattaaa cttggctaat aactcttctt gctgacgctg gaactggcgt
    18481 aatacaccgt taatcaaccc tttaagttgc ggacgcttaa ttgcgatagc gccttcaacc
    18541 gtttcagcca gcgcagcatg aggtggaatg cgggtataaa gcagttgata caaaccaacc
    18601 ataatcaggt aatgcacagt gcgctgtttg ccggtcatcg gacgggccat taacttatta
    18661 atcagccagt ctaactgcga aagcgtacgc agtacgccaa agcacaactc ttgaagaagt
    18721 gctttgtctt tatcagaaac tttttgctgg agcggtggca gaatgttgct taatgattgc
    18781 ccttgctcga cgacttgttc aacggcctgg gccgccatgc tacgtaaatt acgttgtttt
    18841 ttcataagta taaaaatgcc cggtaagacc gggcttagaa gagtggacta tcaggccaga
    18901 cggttgcccg gaacaaacca ttcccgacga gaattcagga ggtcttgcgc gctcatcgct
    18961 ttcttacccg caggttgtaa cgagagcaga ttcaggattc catcaccagt tgcaacctga
    19021 atgccttgtt tgttggcttc aaggatcgtt cctggtgcag cgttggttgc cgtatcaatg
    19081 accgacgctt tccagacttt aaccggctgt ctttcaattt ccagccagct cattggccat
    19141 ggattgaaag cgcgaatgta gcgttcaagc tgtgctgccg aaagtgacca gtcaatacgc
    19201 gcttcttctt tactcaactt ttcggcgtaa gtgacaagag tttcgtcctg aacttctggt
    19261 ttcgccgtgc cgtctgccag ttgtttcaac gtggtgataa gcccttgtgg gccaagctct
    19321 gccagcttgt cgtacagcgt accactggta tcttctgcag taatcgggca ggagagctta
    19381 tagagcatgt caccggtgtc taaaccgaca tccatttgca taatggtcac accagtttct
    19441 gcatcacccg cccatagtga gcgttggatt ggtgcagcac cgcgccagcg tggcagcagt
    19501 gaaccatgaa cgttgataca gccaagacgc ggcatctcca gcactgcttt aggcagaatt
    19561 aagccatagg cgacgacgac cataacatca gcctgcagat cggcgaccag ttgctggttt
    19621 tcttgtggac gcagggaaac aggttgaaaa acgggcagac ctttttcctc agccagaact
    19681 ttaaccgggc tgggcatcag ttttttaccg cgtcctgccg gtcggtctgg ctgggtgaac
    19741 acgccaacga cgttatgacc agaagacaac agcgcgtcga gatgacgcgc tgcaaagtca
    19801 ggtgtacccg caaaaataat acgtagtgat tctgacacgt tagttcttat ccttaagccc
    19861 gggctttcag acgatccagt ttttcaactt tctgacgaat acgttgttgt ttcaacggtg
    19921 acagataatc cataaacagt ttgccgacca ggtgatccat ctcatgctga atacagatgg
    19981 ctaacagacc gtctgcttcc aattcaaatg gtttaccgtc gcggtccagg gcgcgaattt
    20041 taactttctc tgcgcgtggc actaaagcac gttgttcagg gatcgacagg caaccttctt
    20101 caatgcctgt ttcgccgctt ttttctaaaa gctccggatt gattaacacc agccgttcgt
    20161 cacggttttc cgaaacatca ataacaatga tacgttgatg gatatcaacc tgggttgccg
    20221 ccaggccaat accttcttct gcgtacatcg tctcgaacat atcatcgacg atacgctgaa
    20281 tttctgcatt cacttcttct accggtttag caactttgcg aagccgctcg tccggaatat
    20341 gtaacacttg caaaactgac ataaatctcc agagatgtgt tcaggagtta gaaagattat
    20401 ttcttctatt ctagacaaat ccccctctga ttgacagcat cactgaccaa tcgcaaagat
    20461 tgctaaggct gcttatggca gggagataag gatggtcgat acagatattt ggctgcgttt
    20521 aatgagcatc agcagcttgt acggcgatga tatggtccgt atagctcact ggctggcaaa
    20581 acagtcgcat attgatgcgg ttgtattgca gcaaacaggg cttacattgc ggcaggcaca
    20641 acgctttctt tcatttccgc gaaagagtat cgaaagctca ctttgttggt tggagcaacc
    20701 caaccatcat ttaatccctg cggacagcga attttatcct cctcaacttc tggcgacgac
    20761 agattacccc ggcgcactgt ttgttgaagg agaactgtac gcgctgcatt catttcagct
    20821 tgccgtagtg gggagtcggg cgcattcatg gtatggcgag cgatggggac gattattttg
    20881 cgaaactctg gccacgcgtg gagtgacaat tacgagtgga ctggcgcgtg gaatcgatgg
    20941 tgtggcgcat aaagcggcct tacaggtaaa tggcgtcagc attgctgtat tggggaacgg
    21001 acttaatacc attcatccgc gccgccatgc ccgactggct accagtttgc ttgaacatgg
    21061 tggggcactt gtctcggaat ttcccctcga tgtttcaccc cttgcttaca atttcccacg
    21121 aagaaatcgc attatcagtg gtctaagtaa aggtgtactg gtggtggaag cggctttgcg
    21181 cagtggttcg ttggtgacag cacgttgtgc gcttgagcag gggcgtgaag tttttgcctt
    21241 gccaggacca atagggaatc cgggaagcga agggcctcac tggttaataa aacaaggtgc
    21301 gattcttgtg acggaaccgg aagaaattct ggaaaacttg caatttggat tgcactggtt
    21361 gccagacgcc cctgaaaatt cattttattc accagatcag caagacgtgg cattgccatt
    21421 tcctgagctc ctggctaacg taggagatga ggtaacacct gttgacgtcg tcgctgaacg
    21481 tgccggccaa cctgtgccag aggtagttac tcaactactc gaactggagt tagcaggatg
    21541 gatcgcagct gtacccggcg gctatgtccg attgaggagg gcatgccatg ttcgacgtac
    21601 taatgtattt gtttgaaacc tatattcaca cagaagctga gttgcgtgtg gatcaagaca
    21661 aacttgaaca ggatcttacc gacgcaggat ttgatcgaga agatatctac aatgccctgc
    21721 tttggctgga aaagcttgcg gattatcagg aaggactgac agaaccgatg caactggcct
    21781 ctgatccact ctccatgcgt atttataccc ctgaggagtg tgaaagactg gatgccagct
    21841 gtcgtggttt tctgcttttc cttgagcaaa ttcaggtgct taaccttgaa atccgtgaaa
    21901 tggtgataga gcgagtgctc gcgctggata ccgcagagtt cgacctggaa gacctgaaat
    21961 gggtaatcct gatggtgttg ttcaatattc cgggctgcga aaatgcgtac cagcaaatgg
    22021 aagaattact ctttgaagtg aatgaaggta tgctgcatta atcatttctt taattcagca
    22081 taagttgtta tggcgaaatc agcactgttc acggtgcgta ataatgagtc ctgcccaaag
    22141 tgcggggctg aactggttat tcgatccggg aaacacggtc cgtttcttgg atgctcacag
    22201 tatccggcgt gtgactacgt ccgtcctctg aaatcttcag cggatggaca tattgtcaaa
    22261 gttctggagg ggcaggtttg ccctgcatgt ggcgcaaatc tggtattacg ccagggacgc
    22321 tttggtatgt ttattggttg cagtaactac cctgaatgcg aacataccga acttatcgat
    22381 aaaccggacg aaacagcaat tacatgcccc caatgtcgga cgggccatct ggtccagcgc
    22441 cgctcccgtt atggcaaaac atttcactcc tgtgatcgct acccggagtg tcaatttgcc
    22501 attaacttca aacccatagc tggagaatgc cctgagtgtc attatccact actcatcgaa
    22561 aagaaaaccg cgcagggtgt aaaacacttt tgtgccagta aacaatgtgg aaagccggtt
    22621 tcggcggaat aataacgtga ataataacct gcaaggagac gctatcgcag ctgcgataga
    22681 tgtcctcaat gaagaacgtg tcatcgccta tccaacggaa gccgttttcg gtgttgggtg
    22741 cgatcctgat agcgaaacag cagtgatgag actgttggag ttaaaacagc gtccggttga
    22801 taaggggctg attttaatcg cggcaaatta cgagcagctt aaaccctata ttgatgacac
    22861 catgctgact gatgcgcagc gtgaaaccat tttttcccgc tggccaggtc ctgtcacctt
    22921 tgtctttccc gcgcctgcga caacaccgcg ctggttgacg ggccgctttg attcgcttgc
    22981 tgtacgagtc accgaccatc cgttggtggt tgctttgtgc caggcttatg gtaaaccgct
    23041 ggtttctacc agtgccaact tgagtggatt gccaccttgt cgaacagtag acgaagttcg
    23101 cgcacaattt ggcgcggcgt tcccggttgt gcttggtgaa acgggggggc gtttaaatcc
    23161 ttcagaaatc cgcgatgccc tgacgggtga actgtttcga caggggtaac ataatggaaa
    23221 cctatgctgt ttttggtaat ccgatagccc acagcaaatc gccattcatt catcagcaat
    23281 ttgctcagca actgaatatt gaacatccct atgggcgcgt gttggcaccc atcaatgatt
    23341 tcatcaacac actgaacgct ttctttagtg ctggtggtaa aggtgcgaat gtgacggtac
    23401 cttttaaaga agaggctttt gccagagcgg atgagcttac tgaacgggca gcgttggctg
    23461 gtgctgttaa taccctcaag cggttagaag atggacgctt gcagggtgac aataccgatg
    23521 gtataggttt gttaagcgat ctggaacgtc tgtcttttat ccgtccgggt ttacgtattc
    23581 tgcttatcgg cgctggtgga gcatctcgcg gcgtactact accactcctt tccctggact
    23641 gtgcggtgac aatcactaat cggacggtat cccgtgcgga agagttggct aaattgtttg
    23701 cgcacactgg cagtattcag gcgttgggta tggacgaact ggaaggtcat gagtttgatc
    23761 tcattattaa tgcaacatcc agtggcatca gtggtgatat tccggcgatc ccgtcatcgc
    23821 tcattcatct aggcatttat tgctatgaca tgttctatca gaaaggaaaa actccttttc
    23881 tggcatggtg tgagcagcga ggctcaaagc gtaatgctga tggtttagga atgctggtgg
    23941 cacaggcggc tcatgccttt cttctctggc acggtgttct gcctgacgta gaaccagtta
    24001 taaagcaatt gcaggaggaa ttgtccgcgt gaatcaggcc atccagtttc cggacaggga
    24061 agagtgggac gagaataaaa aatgtgtatg ttttcccgct ctcgtgaatg gtatgcaact
    24121 gacatgcgcg atctctggcg agagtctggc gtatcgcttt actggagata cgccagaaca
    24181 gtggttagcg agttttcgtc agcatcgctg ggacctggaa gaagaagcgg aaaacttaat
    24241 tcaggaacaa agtgaagatg atcaaggctg ggtctggtta ccctgatcca gatattcgtc
    24301 cttccatttc acgtaattat tcgcggaata gcgtaaccca gccttctctt catcacttaa
    24361 cgggcggatc tgtttgacgg ggctaccgag atacagatat ccgctctcca gccgtttatt
    24421 ttgtgggacc agactacccg caccaatcat cacatcatct tctactattg cgccatcaag
    24481 taaaattgag cccatcccaa ccaaaactcg attgccaatg gtgcagccgt ggagcatcac
    24541 cttgtgacca acagtgacat cttcgccaat ggttaatggg ttgccatctg ggttgtacga
    24601 ggatttatga gtgacatgca acatactgcc atcctggata ttggtgcgtg ctccgatctg
    24661 tacataatgt acatctccac gaatcacaac gagcggccag atccccacat catcagccag
    24721 acgaacgcca ccaatcacga cactgctatc gtcgatcatt acgcgctgac cgatttgtgg
    24781 aaaaagatcg cggtatgggc gtaaaacatc agacatactt acctcagcaa taaatgattt
    24841 actaatgact ttgggggcat tattggcctt gtgcaagtct tttagtatgc aaaaaagcac
    24901 cgttttgtgt gcgattgcag caaaaagggt gaaaaaacaa caaacagaaa aaaagatcaa
    24961 aaaaatactt gtgcaaaata ttgggatccc tataatgcgc ctccgttaag acgacaacgt
    25021 gaaacacttc acaggatggt cggaacaacg aagagaaaaa atcctgaaat tcagggttga
    25081 ctctgaaaga ggaaagcgta atatacgcca cctcgcgaca gtgagctgaa agccgcgtcg
    25141 c
//
LOCUS       DADMIB010000046        25008 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.046, whole genome shotgun sequence.
ACCESSION   DADMIB010000046 DADMIB010000000
VERSION     DADMIB010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25008
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.046"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..808
                     /locus_tag="JNZ89_001797"
     CDS             <1..808
                     /locus_tag="JNZ89_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HAY8935708.1"
                     /translation="PRWLMSRGKQEQAESILRKIMGNTLATQAVQEIKHSLDHGRKTG
                     GRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVIN
                     LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF
                     AMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHN
                     GFSYWIYGCMGVLAALFMWKFAPETKGKTLEELEALWEPETKKTQQTATL"
     gene            complement(852..1250)
                     /gene="psiE"
                     /locus_tag="JNZ89_001798"
     CDS             complement(852..1250)
                     /gene="psiE"
                     /locus_tag="JNZ89_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HAY8935709.1"
                     /translation="MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLAD
                     VLFAPEQTSKYELVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHK
                     SPLDVLIYSAAILLLVITLWLCNSKRLKRE"
     gene            complement(1376..1519)
                     /locus_tag="JNZ89_001799"
     CDS             complement(1376..1519)
                     /locus_tag="JNZ89_001799"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935710.1"
                     /translation="MFQRNIVDFSRIAGGWESPEWVIFELPAWVRFVLPDAPPGAAYP
                     AYG"
     gene            1520..1798
                     /locus_tag="JNZ89_001800"
     CDS             1520..1798
                     /locus_tag="JNZ89_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935711.1"
                     /translation="MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSN
                     VSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH"
     gene            complement(1845..3941)
                     /locus_tag="JNZ89_001801"
     CDS             complement(1845..3941)
                     /locus_tag="JNZ89_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HAY8935712.1"
                     /translation="MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPT
                     ARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTY
                     KDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
                     LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIGGSQMFHGPASLFGGVEYQTPWQPLRL
                     KLEYEGNNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFN
                     DLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNVGLADPQIQAKGDTLYVTGE
                     QVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEP
                     LGHETKLAQKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMG
                     MADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNL
                     QANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQRDWRSA
                     KDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVV
                     GGYATITNVLKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGR
                     KFQLYDMTSDRSVNFR"
     gene            complement(3941..4678)
                     /locus_tag="JNZ89_001802"
                     /pseudo
     CDS             complement(3941..4678)
                     /locus_tag="JNZ89_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418452.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
     gene            complement(4675..5313)
                     /locus_tag="JNZ89_001803"
     CDS             complement(4675..5313)
                     /locus_tag="JNZ89_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HAY8935713.1"
                     /translation="MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDI
                     QNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKTLLGGDNLI
                     EVNNLAADPLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDET
                     LVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ"
     gene            complement(5427..5669)
                     /locus_tag="JNZ89_001804"
     CDS             complement(5427..5669)
                     /locus_tag="JNZ89_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935714.1"
                     /translation="MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSA
                     TSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ"
     gene            complement(6131..7780)
                     /gene="pgi"
                     /locus_tag="JNZ89_001805"
     CDS             complement(6131..7780)
                     /gene="pgi"
                     /locus_tag="JNZ89_001805"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HAY8935715.1"
                     /translation="MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSAT
                     FDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALR
                     NRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDL
                     GPYMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
                     AHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
                     IGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEA
                     ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLI
                     HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
                     PATLDYVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQW
                     GVELGKQLANRILPELKDDKEISSHDSSTNGLINRYKAWRG"
     gene            8305..9654
                     /gene="lysC"
                     /locus_tag="JNZ89_001806"
     CDS             8305..9654
                     /gene="lysC"
                     /locus_tag="JNZ89_001806"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HAY8935716.1"
                     /translation="MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
                     TNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAA
                     ALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVA
                     ALAELAALQLLPRLNDGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVD
                     IWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFV
                     GSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
                     HNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALI
                     GNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE"
     gene            9906..10178
                     /locus_tag="JNZ89_001807"
     CDS             9906..10178
                     /locus_tag="JNZ89_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3811 domain-containing protein"
                     /protein_id="HAY8935717.1"
                     /translation="MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKK
                     EYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR"
     gene            complement(10311..11183)
                     /gene="rluF"
                     /locus_tag="JNZ89_001808"
     CDS             complement(10311..11183)
                     /gene="rluF"
                     /locus_tag="JNZ89_001808"
                     /EC_number="5.4.99.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2604) synthase RluF"
                     /protein_id="HAY8935718.1"
                     /translation="MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGD
                     QVKPGDIVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFP
                     IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPIL
                     GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPL
                     GEWRDLTDDELIDLFKLIENSSSEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASN
                     GKRFTSPGRKKKGR"
     gene            11531..12478
                     /locus_tag="JNZ89_001809"
                     /pseudo
     CDS             11531..12478
                     /locus_tag="JNZ89_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709812.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
     gene            12548..13354
                     /locus_tag="JNZ89_001810"
     CDS             12548..13354
                     /locus_tag="JNZ89_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8935719.1"
                     /translation="MQTWLNLQDKIIIVTGGASGIGLAIVEELLAQGANVQMVDIHGG
                     DGQYEGHKGYQFWPTDISSAKEVNHTVAEIIQRFGRIDGLVNNAGVNFPRLLVDEKAP
                     AGQYELNEAAFEKMVNINQKGVFLMSQAVARQMVKQHDGVIVNVSSESGLEGSEGQSC
                     YAATKAALNSFTRSWSKELGKHGIRVVGIAPGILEKTGLRTPEYEEALVWTRNITVEQ
                     LREGYTKNAIPIGRAGRLAEVADFVCYLLSERASYITGVTTNIAGGKTHG"
     gene            13364..13771
                     /locus_tag="JNZ89_001811"
     CDS             13364..13771
                     /locus_tag="JNZ89_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sorbose transporter subunit IIA"
                     /protein_id="HAY8935720.1"
                     /translation="MVNAIFCAHGKLACAMLESVQMVYGDARVEAVEFVPGENAGDIV
                     AKLGKLVSIHNQDEWLIAVDLQCGSPWNAAAMLAMRNPRLRVISGLSLPLALELVDNQ
                     DSMNVDELCEHLTQIAKQTCVVWKQLATAEEDF"
     gene            13771..14265
                     /locus_tag="JNZ89_001812"
     CDS             13771..14265
                     /locus_tag="JNZ89_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HAY8935721.1"
                     /translation="MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRR
                     TLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVRQGVKIDTL
                     NIGGMAWRPGKKQLTKAVSLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQ
                     LIAN"
     gene            14331..15128
                     /locus_tag="JNZ89_001813"
     CDS             14331..15128
                     /locus_tag="JNZ89_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HAY8935722.1"
                     /translation="MEISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILG
                     DLKTGIILGGTLELIALGWMNVGAAQSPDSALASIISAILVIVGQQSIATGIAIALPV
                     AAAGQVLTVFARTITVVFQHAADKAAEEARFRTLDILHVSAFGVQALRVAIPALIVSL
                     FVSADMVSNMLSAIPEFVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGG
                     YLDLSLLAFGGVGVIMALVYIQLNPQWRKAEPQLQATASTALDQLDD"
     gene            15139..15981
                     /locus_tag="JNZ89_001814"
     CDS             15139..15981
                     /locus_tag="JNZ89_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000437910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HAY8935723.1"
                     /translation="MEQRKITRSDLVSMFLRSNLQQASFNFERIHGLGFCYDMIPAIK
                     RLYPLKEDQVAALRRHLVFFNTTPAVCGPVIGVTAAMEEARANGAEIDDGTINGIKVG
                     LMGPLAGVGDPLVWGTLRPITTALGASLALSGNILGPLLFFFIFNAVRLAMKWYGLQL
                     GFRKGVNIVSDMGGNVLQKLTEGASILGLFVMGVLVTKWTSINVPLVVSQTHAADGST
                     VTMTVQNILDQLCPGLLALGLTLLMVRLLNKKINPVWLIFALFGLGIIGNALGFLSRF
                     FAPA"
     gene            16015..17244
                     /locus_tag="JNZ89_001815"
     CDS             16015..17244
                     /locus_tag="JNZ89_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HAY8935724.1"
                     /translation="MKTTALRLYGKRDLRLETFDLPEMQEDEILATVVTDSLCLSSWK
                     EANLGENHKKVPDDVATNPIIIGHEFCGDILAVGKKWQHKFQPGQRYVIQANLQLPDR
                     PDCPGYSFPWVGGEATHVVIPNEVMEQDCLLAYDGETYFEGSLVEPLSCVIGAFNANY
                     HLQEGSYNHTMGIRPQGRMLILGGTGPMGLLAIDYALHGPVNPSQLVITDTDNDKLSY
                     ARKHYPSEPQTLIHYLNAADAAFDTLMALSGGHGFDDIFVFVPNEGLVTLASSLLATD
                     GCLNFFAGPQDKHFSAPINFYDVHYAFTHYVGTSGGNTDDMRAAVKLIEEKKVQAAKV
                     VTHILGLNAAGETTLELPAVGGGKKLVYTGKYLPLTSLTQIQDQALAAILARHQGIWS
                     GEAEQYLLTHAEAISHD"
     gene            17627..18316
                     /gene="pepE"
                     /locus_tag="JNZ89_001816"
     CDS             17627..18316
                     /gene="pepE"
                     /locus_tag="JNZ89_001816"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HAY8935725.1"
                     /translation="MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQ
                     TWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGL
                     LAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTN
                     ALPEGHKGETREQRIRELLVVAPELTIIGLPEDNWITVSKGHATLGGPNTTYVFKAGE
                     EAVPLEAGHRF"
     gene            complement(18407..20038)
                     /locus_tag="JNZ89_001817"
     CDS             complement(18407..20038)
                     /locus_tag="JNZ89_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HAY8935726.1"
                     /translation="MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKK
                     PLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTF
                     DLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGV
                     QVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTAALTAAGIISFPVALCLVIGANL
                     GSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVI
                     YFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALAN
                     AARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEE
                     LAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQ
                     LLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSL
                     HLGLLGDMQRLNSLFCSVAYSVLEQSDEDEGRDEY"
     gene            complement(20258..23946)
                     /gene="metH"
                     /locus_tag="JNZ89_001818"
                     /pseudo
     CDS             complement(20258..23946)
                     /gene="metH"
                     /locus_tag="JNZ89_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000096005.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
     gene            24146..24970
                     /gene="iclR"
                     /locus_tag="JNZ89_001819"
     CDS             24146..24970
                     /gene="iclR"
                     /locus_tag="JNZ89_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418442.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate bypass operon transcriptional
                     repressor IclR"
                     /protein_id="HAY8935727.1"
                     /translation="MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSV
                     ALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLL
                     AIVHPILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASG
                     AGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHAL
                     GLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR"
BASE COUNT         5880 a         6615 c         6534 g         5979 t
ORIGIN      
        1 tcctcgctgg ctgatgtcac gcggcaagca agaacaggcg gaaagtatcc tgcgcaaaat
       61 tatgggcaac acgcttgcaa ctcaggcagt acaggaaatt aaacactccc tggatcatgg
      121 ccgcaaaacc ggtggtcgtc tgctgatgtt tggcgtgggc gtgattgtca tcggcgttat
      181 gctctccatc ttccagcaat ttgtcggcat caatgtggtg ctgtactacg cgccggaagt
      241 gttcaaaacg ctgggggcca gcacggatat cgcgctgttg cagaccatta ttgtcggagt
      301 tatcaacctc accttcaccg ttctggcaat tatgacggtg gataaatttg gtcgtaagcc
      361 actgcaaatt atcggcgcac tcggaatggc aatcggtatg tttagcctcg gtaccgcgtt
      421 ttacactcag gcaccgggta ttgtggcgct actgtcgatg ctgttctatg ttgctgcctt
      481 tgccatgtcc tggggtccgg tatgctgggt actgctgtcg gaaatcttcc cgaatgctat
      541 tcgtggtaag gcgctggcaa tcgcggtggc ggcccagtgg ctggcgaact acttcgtctc
      601 ctggaccttc ccgatgatgg acaaaaactc ctggctggtg gcccatttcc acaacggttt
      661 ctcctactgg atttacgggt gtatgggcgt tctggcagca ctatttatgt ggaaatttgc
      721 cccggaaacc aaaggtaaaa cccttgagga gctggaagcc ctctgggaac cggaaacgaa
      781 gaaaacacaa caaactgcta cgctgtaatc ttcctgtcca gcacgccgcg ccagttcggc
      841 gtgctgtctt tttactcccg cttcagccgt ttcgaattac acagccacag agtgatcacc
      901 agtaacagga tcgcagccga gtagatcaac acatccagtg gcgatttatg atcgacgatg
      961 atcaagcgca caatggcggt gatcccaata tagacaaagt aacgtagcgg gaagtgaaaa
     1021 ccggactgaa agtacttcac aatcagcgcg ataaattcga aatagagaaa gtaaaccacc
     1081 agctcatatt tgctggtttg ttctggcgcg aacagcacat ctgccagatg caccgtttct
     1141 ttgccgagga agacaaccaa aatcaggccg aggcacagca ggccaagatt gagtacggtc
     1201 tgcaaaatgg tggagataaa ctccacgcgc ggacgagaga gtgacgtcat agcagtacct
     1261 ccttcacagt ggcgagcttc ctgtataacg caaaaatgtg acggagatct atattttttg
     1321 tgtatgtttt gttcaacctg gatttggagc gcgcctccac caaagccgga tatacctacc
     1381 cgtaggccgg ataagccgcg cctggcggcg catccggcaa gacaaaccgc acccaagccg
     1441 gtaattcaaa aatcacccat tcaggtgatt cccagccacc agcaatgcgc gaaaaatcga
     1501 caatgttcct ctggaacaaa tgaaacgtaa cctgataaag gtggtaaaaa tgaagcctta
     1561 ttttgctgct ttgatgttat cagtctctgt tcttcctgct tatgctggtc cgctcggtac
     1621 tgctgataaa gccgacctac cgcaaagcaa tgtctccagc ccaatgatgg cccagtcgct
     1681 caggcaacca gacctgcaac cgatatcgac ggacaggaag acagaatgtt ttcgccttta
     1741 cacaccagat cgcaaaccgg gggtgaactg cgttcctgat ggctcgacag gccattaaga
     1801 atgaaggtgc cagtgagtgc gaaaactggc acctttccca tgacttagcg gaaattgacg
     1861 ctacggtcgc tggtcatgtc atacaactgg aacttacgcc caagttgctg accaccgtca
     1921 cgcgtcagcg gcgtccagcc aatcgccgca cggctgcgtg tcgggccaga cgagaagaga
     1981 tccaacggta ccgagacata cacgcctttg gtgaagtccc cttcgccgta ctcctctttc
     2041 aaaacgttgg tgatcgtggc atagccaccc accaccacgc cgctgtcaaa gcgtttggcg
     2101 atctccagcg tgccgccttt atcccctgcc agatactgcc cgacgctggc tttcaccaac
     2161 acgtcctggg cgaaagatgg cgtccagtag gcggtcagat gtccggtttt cacgctgtag
     2221 tcggtgaatt tcatcatatc ttttgcacta cgccagtcgc gctgtttaac gtagttggca
     2281 tccagaccaa acgcccagtt actgtccagc ggacgataca acacttcggc ccccgcaccg
     2341 ccaaacatgg tttcgagata acctccatag acctgaccgt agaagccgtt gcccagatgc
     2401 tggaagtagt tggcttgcag gttattcaca tagacatcgt tctgcacata ctcgcgcaca
     2461 tgggtacgaa cgcgcggtaa gtgcgagtcc tgcggcggat tggtgtagtt aaacttgtcg
     2521 tagttgttgg caagatttgc aaacaggctg ccggtggtca gcagatggtc cgtcagccac
     2581 aaatctgcca ttcccatcac gcccagctga tacatgtaaa agttttccgg gccaccgacc
     2641 gactggttca gcaccggatc gatatggaaa tcaaagcgtg atttgtcgat ataccagccc
     2701 tgctcggtgg actgcggaac cactggctcg acgcgttttt gcgccagctt cgtttcgtgg
     2761 cccaacggct ctccggcgag atgatttttc aggctggcga catcggtttc cgtcgtcacc
     2821 tgcggcatgt taagacgatt ttccgtaatg cggatcgttt tgatcccatc cggcagatcg
     2881 ttcatcacga tccgattagc acggatgatc ccttcgcgcg aatcacgata tttcacctgc
     2941 tcgccggtga catacagcgt atcgcctttc gcctggatct gcggatcggc aagtccgaca
     3001 ttgtatttca acagcgttaa ctgattcgcc accaccgaat gctgcaaaat ggcatcctgc
     3061 ggctgcggtt gatattgcgg gcgggcgtta tcgttgtaag acgggcgcag atcgttaaag
     3121 ttggtgcgca gcgtgacgcc aaacataaag gtgttgccac gttcatagct aaggttaacg
     3181 tcggcccaat cggtaacgcg ataaatcgca ccgacgttaa acttactttt ttgctccagc
     3241 ttcccggcaa aatcctgctg ataattattg ccttcatact ccagtttcag gcgcagcggt
     3301 tgccagggcg tctggtattc cacgccgcca aacagtgagg caggaccgtg gaacatctgg
     3361 ctaccgccga tagatcccgc ctgtttgtag ctgttatcgc gatagcaata tttatcactg
     3421 gctgaacaga gcggattttt cacattaccg ctggtgccca gataacccca gcccaggccg
     3481 agcgtaaaat cgaacggccc ccaggctttg ctggcaacaa gatattccgc atcaaacagc
     3541 cccgtaccgc cgatatccct cgcaccaacc gccacttgcg gcagccagta actctcttcc
     3601 cacaaacgca gtttgagatc gaaggcttta tctttatacg tttgatcgcc agagaacgct
     3661 tcgacgctgc tgtactgccg ggtgcgcacg tcggtgtagc gcagcgttgt ttccagccac
     3721 gggaagagtt gcactgaagc tgagtaataa cggtactgat cgttatcgcg atagttcagg
     3781 ctcaactccc cttcccgcgc catgcgtgcg gtgggcgttt gtaataatcc tacgccaccg
     3841 aaatccgact gcgacgggcc aatgggcgca ggatatgttt cgccgtagca agccatgcta
     3901 atgcccagcg ccagtaagct aagcagatgt ctttttttca ttattggggt atccgctgcg
     3961 tcagagtctg aagaatgtcg gcgttaaggg catcaggcgt ctcactccag acggagtccg
     4021 cgaggccaac ataaataatg ctgccgggca tcggctctac gtgacgcttg ttccagtaag
     4081 ccaccggcgc tttttgcgtg cgtccgtccg ggtaaaccac ccacgcgtag ctgcgatccg
     4141 caccgctaag caggttctgc ccggagagat agctcgccac gtcgcgacct ggagtgaatg
     4201 gctgcttgcc aggacggctg ataagcccga acaacgtgac cgtggacggc ggtggtccga
     4261 cccacagcgt gtagttgccc tgcaacggtg ggttaccgcg ttcggcaacg cgcacgatat
     4321 cgggatcaag attgattttt tgcctgcccg tcactttcaa cgcctgaatt tgctggcgta
     4381 aggcgttaat ggcggcggca tcgtcggcgc tggagtctgc ggcctgttca gccagccgtg
     4441 tcagcaacgc ctgctgctga cgcaatgctg ccgccgttgc cagctcttcg ctaatcaccg
     4501 caccgggcca ccagttgttt gccagccgcg gttagcctac cagatcgatt aaatgctctg
     4561 cgcctgttag tgttttggcc tcactgctgc cattgctgaa caccttgacg gttcctgccg
     4621 cgaagaccga tgacgctccc acactcaaaa gcaacgcgac aaaagtttgt ttaatcattg
     4681 ttttgccgcc ttgatgagag tggttttcac cgggaaataa tccgcgccga gatactgttc
     4741 cgactggcga atttgccctt cgctgtcgat ccagtagcgg ttatgccagc gcgcctggtc
     4801 ggtggagact tcttcgtcca gcacgcgaac caaggtttca tcgctgccga ctttgacggt
     4861 atcggtgcca tcccatttga agactgagcg tgcggtggcg tagcgtacct gctggtactc
     4921 ggtccagccc atcgtgcgcg tccatgttgc accatcaaca atttgtgcgg gtttaatcag
     4981 cgggtcggcg gcaaggttat tcacttcaat caggttgtcg ccgccaagca aagtcttcac
     5041 cagacgacca tgttgtgtga caagagtggc ttgatcctga gtgacccatt tttgttgtcc
     5101 gtcttcagcg aaggccagca ccacaaacaa ttgcggcccg ccattaagct gcatgtactg
     5161 gctggcgtag ggcatatttt gaatatcatc gtccgtcagc tgtacgcctg gcgtgccgaa
     5221 cagactgtcc cacagtgaat tgcccagctc tttagtcgtg gctgaacagg cctgtaatag
     5281 caggcagata agaatgagtg caggtcgctt cacgactctt ctccagaggg gcagaataac
     5341 cacaccggag tgtggttatg gtaaatccct tcatacttca agccacagat gcaatgactc
     5401 aaattatttt ggggatacat actttattac tgggtactgg tggtcgtggt tgtggtggtc
     5461 ccggtattag aaccatcacc gccaccggtt gccgcgagcg cgacacccac cgccgagctt
     5521 acggtgctga cgctggtcgc ggaggaacta cccgccgaaa ccgacgttgc tgccgaccct
     5581 gccgcttcgc ccacctgtac aggtgcagcc cacgcagaag tcgccgcaag cgcagatatg
     5641 gcaaaaatgc catacagaac ttttttcata acaatttccc ttcattgaat gaatggagat
     5701 ttacccaaaa acatttcggg cgggatcgag tatacacaac taaagcatgc gaattacggc
     5761 gcggggaatt agcgatggcg ttttaggata attggaatga atatcaaata taagcttcaa
     5821 cttatattta aataacaata aaaatcataa acttaaaata aaaacaaaag taattaatct
     5881 gcgtattctc cgaaataaac aacgattaaa aatctatttt aggattaacc tcacggtatg
     5941 atttccgtta aatcacagac aaggggattt atctgataaa acaatgccga cttattgtcg
     6001 gcattgtttt taaggttatt taactcctca tactatgcat taatgtcgat attggcatca
     6061 ggctccggtt gccggatgcg gcgtaaacgc cttatccggc ctacatatcg gcatcaggca
     6121 cgcatgatga ttaaccgcgc cacgctttat agcggttaat cagaccattg gtcgagctat
     6181 cgtggctgct gatttctttg tcatctttca gctctggcag aatacggttc gccagttgtt
     6241 tacccaactc cacgccccac tggtcgaagg taaagatgtt caggatcacg ccctgagtaa
     6301 agattttgtg ctcatacagc gcaatcaacg cccccaggct gaacggagtg atttcgcgca
     6361 gcaggatgga gttggtcggg cggttacctt cgaacacttt gaacggcacc acgtagtcaa
     6421 gcgttgccgg atctttaccc tgatcgcgat attcctgctc aaccacttcg cgggatttac
     6481 caaacgccag cgcttcggtc tgggcgaaga agttagacag cagtttctgg tggtgatcag
     6541 agagcgggtt atgggtgata gccggggcga tgaaatcgca cggtaccatt ttggttccct
     6601 ggtggatcag ctggtagaac gcgtgctgac cgttagtgcc tggttcaccc cagataatcg
     6661 ggccagtctg gtaatccaca acgttaccgt tacggtcaac atacttaccg ttggactcca
     6721 tattgccctg ctggaagtac gccgcgaaac ggtgcatata ctggtcatac ggcagaatcg
     6781 cttcagtttc cgcaccaaag aaattgttgt accagatgcc aatcagcgcc agcaggacag
     6841 gcaggttttt ctcggcaggc gtggtggaga aatgcttgtc catcgcgtgt gcgccagaaa
     6901 gcagttcaac gaagttatca aagccgatgg agagaacaat cgacaggcca atcgctgacc
     6961 acaaagagta acggccgccg acccagtccc agaactcgaa catgttggca gtatcaatac
     7021 caaactcgcc aacggctttg gcattggtgg aaagcgccgc aaagtgtttt gcaacgtgtt
     7081 tttcatcacc tgccgctttc aggaaccagt cacgcgcgct atgggcgttg gtcatagttt
     7141 cctgagtggt gaaggtttta gatgctacca agaacagcgt ggtttccggg tttacttttt
     7201 tcagcacttc agcgatgtga gtcccatcga cgttagaaac aaagtgcatg ttcaggtgat
     7261 ttttgtacgg acgcagtgct tcggtcacca tgtacgggcc gaggtcagaa ccaccgatcc
     7321 cgatgttcac tacgtcagtg attgctttgc cggtataacc cttccactca ccggagataa
     7381 tcgcttccga gaaggttttc atcttctcca gcaccgcgtt gacttccggc attacgtctt
     7441 tgccatcaac cagaatcggg gtattgctac ggttacgcag cgctacgtgc agcacggcgc
     7501 ggttttcagt gcggttgatc ttctcgccag agaacatcga cttaatcgcg cccgccagat
     7561 cgcactcttt cgccagatcc tgtaatttcg ccagcgtctc ttcagtgatg cggtttttgg
     7621 agtaatccac cagcatctga tcgtcgaatg ttgcggagaa cttagaaaaa cgatcgccgt
     7681 ctttagcaaa aagatcggcg atcgtaacgt ctttcatttc atcgaagtgt ttctgtagtg
     7741 cctgccaggc agcggtctgc gttggattga tgtttttcat tagcaatact cttctgattt
     7801 tgagaattgt gactttggaa gattgtagcg ccagtcacag aaaaatgtga tggttttagt
     7861 gccgttagcg taatgttgag tgtaaaccct tagcgcagtg aagcatttat tagctgaact
     7921 actgaccgcc aggagtggat gaaaaatccg catgaccccg tcgttgacaa ccgccccgct
     7981 caccctttat ttataaatgt actacctgcg ctagcgcagg ccagaagagg cgcgttgccc
     8041 aagtaacggt gttggaggag ccagtcctgt gataacacct gagggggtgc atcgccgagg
     8101 tgattgaacg gctggccacg ttcatcatcg gctacagggg ctgaatcccc tgggttgtca
     8161 ccagaagcgt tcgcagtcgg gcgtttcgca agtggtggag cacttctggg tgaaaatagt
     8221 agcgaagtat cgctctgcgc ccacccgtct tccgctcttc ccttgtgcca aggctgaaaa
     8281 tggatcccct gacacgaggt agttatgtct gaaattgttg tctccaaatt tggcggtacc
     8341 agcgtagctg attttgacgc catgaaccgc agcgctgata ttgtgctttc tgatgccaac
     8401 gtgcgtttag tagtcctctc ggcttctgct ggtatcacta atctgctggt cgctttagcg
     8461 gaagggctgg aacctggcga gcgattcgaa aaactcgacg ctattcgcaa catccagttt
     8521 gccattctgg aacgtctgcg ttacccgaac gttatccgtg aagagattga acgtctgctg
     8581 gagaacatta ctgttctggc agaagcggcg gcgctggcaa cgtctccggc gctgacagat
     8641 gagctggtca gccacggcga gctgatgtcg accctgctgt ttgtcgaaat cctgcgcgaa
     8701 cgcgatgttc aggcacagtg gtttgatgta cgtaaagtga tgcgtaccaa cgaccgattt
     8761 ggtcgtgcag agccagatgt agccgcgctg gcggaactgg ccgcgctgca gctgctccca
     8821 cgcctcaatg acggcttagt gatcacccag ggatttatcg gtagcgaaaa taaaggtcgt
     8881 acaacgacgc ttggccgtgg aggcagcgat tatacggcag ccttgctggc ggaggcttta
     8941 cacgcatctc gtgttgatat ctggaccgac gtcccgggca tctacaccac cgatccacgc
     9001 gtagtttccg cagcaaaacg cattgatgaa atcgcgtttg ccgaagcggc agagatggca
     9061 acttttggtg caaaagtact gcatccggca acgttgctac ccgcagtacg cagcgatatc
     9121 ccggtctttg tcggctccag caaagaccca cgcgcaggtg gtacgctggt gtgcaataaa
     9181 actgaaaatc ctccgctgtt ccgcgcgctg gcgcttcgtc gcaatcagac tctgctcact
     9241 ttgcacagcc tgaatatgct gcattctcgc ggcttcctcg cggaagtttt cggcatcctc
     9301 gcgcggcata atatttcggt agacttaatc accacgtcag aagtgagcgt ggcattaacc
     9361 cttgatacca ccggttcaac ctccactggc gatacgttgc tgacgcaatc tttgctgatg
     9421 gagctttccg cactgtgccg ggtggaagta gaagaaggtc tggcgctggt cgcgttgatt
     9481 ggcaatgacc tgtcaaaagc ctgcggcgtt ggcaaagagg tattcggcgt actggaaccg
     9541 ttcaacattc gcatgatttg ttacggcgca tccagccata acctgtgctt cctggtgccc
     9601 ggcgaagatg ccgagcaggt ggtgcaaaaa ctgcatagta atttgtttga gtaaatactg
     9661 tatggcctgg aagctatatt tcgggccgta ttgattttct tgtcactatg cttatcaata
     9721 aacgagcctg tactctgtta accaacgtct ttatcgagaa taattgcctt taattttttt
     9781 atctgcatct ctaattaatt atcgaaagag ataaatagtt aagagaaggc aaaatgaata
     9841 ttatcagttc tgctcgcaaa cgaattcccg tacactgaac tctctggctc actgagggca
     9901 ccatcatggc actcccccgt attacccaaa aagagatgac tgaacgcgag cagcgtgaac
     9961 ttaaaacact gctggatcgg gcgcggattg cgcatggtcg cgtactgacc aactccgaaa
    10021 ccaacagcat taagaaagag tacatcgata aattaatggt cgagcgtgag gctgaagcga
    10081 aaaaagcccg ccaattgaag aaaaagcagg cttataaacc ggatcctgaa gcgtcattta
    10141 gctggtcagc aaatacgtcg acgcgcggca ggcgctaatg aacaatcaac gcctgagatt
    10201 ttcactcgtc tgtgtggaca caatcttccc ctcaccctaa ccctctcccc gaaggggcga
    10261 ggggactgtc cgagctcttt ttggacgttt tcatcagtct gaggcgttaa tcagcgtccc
    10321 ttctttttac gccccggcga ggtaaaacgc ttaccgttgg acgccgggcg accgcctttt
    10381 tccgccgttt tttccatctt aacgactgga cgtttgatgc ccgctgtttt cggtttggcc
    10441 ttcgctttag gttttgcctc ggaagaggaa ttttcgatga gcttaaagag gtcgattaac
    10501 tcatcgtcgg ttaaatcgcg ccactccccc agcggaatgc cgcttaagct gacgttcata
    10561 atgcgcgtac gttccagctt tttcacttca tagccgaaat gctcgcacat gcgccggatc
    10621 tgacggttca gcccctgcac cagggtaatg cggaagacaa acggcgcttc ttttttgact
    10681 ttgcactttt tcgtcaccgt cccgaggatc ggcacccccg cccccatacc acgaataaat
    10741 tcatcggtaa tcggtttatc gaccgtcacc agatactctt tctcatgatc gttacccgca
    10801 cggaggatct tattcaccag atcgccgtga ttggtgagga aaatcagccc ctgggagtct
    10861 ttatccaggc ggccaatcgg gaacacgcgt ttgctgtggt taacgaaatc gacaatgtta
    10921 tcgcgctcgc catcttcggt ggtgctgaca ataccgacgg gcttgttcag ggcgataagt
    10981 accaaatctt cggcttcccg aggctcaatc aactgaccgt ttactttcac aatgtcgccg
    11041 ggtttcacct gatcgccaat ggtggctcgc ttgccattaa ggaacacatt gccttgctcg
    11101 atatagcgat ccgcttcgcg gcgtgagcaa attccgcttt cgctgatgta tttatttaaa
    11161 cggactgatg agtcgggcag cataaattct cctgtaaaac gcggaatata ccgtacctct
    11221 tagcggggaa aaacagggtt atgcggcaac gtcgaaatta aatgtgatct gccacgcctt
    11281 ttatcacaaa agtgtctccg gaagtacgat gcaaatttgc ctggcaaaat aaggataatc
    11341 aacatattac gaatcgctgc acacctgtgc tgatgactac tacgcagaga aacaaatgtg
    11401 caagagaaag cgctatatct ccccatgcaa agagtgaaaa atcgctttga aaggccctca
    11461 tgatggggtt atatcagatc aagcggtgag aaagcatatt tgcacaaatg tgcagaacca
    11521 ggaggcggca atggaaaaca gtgacgatat ccgtttgatt gtgaagattg cccaactcta
    11581 ttacgaacag gatatgacgc aggcgcaaat cgcgcgcgaa ctgggtattt accgcaccac
    11641 catcagccgc ttgcttaaac gaggccgcga tcagggaatt gtcaccatcg ccatcaacta
    11701 tgactacaac gaaaatctct ggctggagca gcaactgaag caaaagtttg gcctgaaaga
    11761 cgttgtggtg gtgtcgggaa atgatgagga tgaagagact caactggcga tgatggggtt
    11821 acacggcgcg caactgctgg atcgcttgct ggagcctggc gatattgtcg gtttttcctg
    11881 gggtcgcgcg gtgagcgcac tggttgaaaa cttgccgcag gcggggcaat cgcggcagtt
    11941 aatctgcgta ccaattattg gcggaccgtc cggtaaactc gaaagccgct atcatgtaaa
    12001 cacattaacc tacagcgcgg cagcgaagct gaaaggggaa tcgcatctcg cggattttcc
    12061 ggctctgctg gataacccat taattcgtaa tgggatcatg cagtctcagc actttaaaac
    12121 catctctgcc tactgagata atctggatgt cgccctggtg ggaattggct caccggccat
    12181 tcgcgacggc gctaactggc atgcgtttta tggtggtgaa gagagtgacg acctgaatgc
    12241 ccgccaggtt gctgacgata tttgctcgcg cttttttgat attcacggcg caatggttga
    12301 aacgaatatg agcgaaaaaa cactctctat cgaaatgaat aaattaaagc aggcacgata
    12361 ttccattggc attgccatga gtgaagaaaa atacagcgga attgttggtg cactgcgtgg
    12421 aaaatatatt aattgtctga taacgaatag cagcacagct gaactattac tgaaataaaa
    12481 atcttcccga tgtttagcgt aataaaaatt acggcggggc cctattatct aaaatcagga
    12541 gtctgttatg caaacgtggt taaatttgca ggataaaatc attattgtca ccggcggcgc
    12601 atccggtatt ggtctggcga ttgtagagga attattagca caaggcgcaa acgtacagat
    12661 ggtagatatt cacggtggcg atggtcaata tgaaggtcat aaaggctatc agttttggcc
    12721 gaccgatatt tccagcgcca aagaggtaaa tcatacggta gcggaaatta tccagcgttt
    12781 tggtcgcatc gacggtctgg tcaataacgc cggggtcaat ttcccgcgtc tgctggtcga
    12841 tgagaaagcg cctgccgggc agtatgaact caacgaagct gcattcgaaa aaatggtcaa
    12901 tatcaaccag aaaggcgttt ttctgatgtc gcaggcggtg gcgcgacaga tggtcaaaca
    12961 acatgatggc gtgattgtga atgtttcctc agaaagtgga ctggaaggct cagaaggcca
    13021 aagctgttac gccgctacca aagccgcgct taatagcttc acgcgatcct ggtcgaaaga
    13081 attgggtaaa cacggtatcc gtgtggtcgg tatcgcgccg gggattctgg aaaaaacagg
    13141 actgcgcacg ccggaatatg aagaagcgct ggtgtggacg cgcaatatca ccgtcgagca
    13201 gctgcgtgaa ggctatacca aaaacgccat tcctattggg cgcgccggaa gattagcaga
    13261 agtcgctgat tttgtttgtt atctgctgtc tgaacgcgcc agctatatca ccggagtaac
    13321 cactaacatt gcgggcggca aaacgcacgg ctaaggaggc tttatggtca atgccatttt
    13381 ttgcgcccac ggcaaattag cttgcgccat gctggaatcg gttcagatgg tgtacggcga
    13441 cgccagggtc gaggcagttg aatttgtgcc cggcgagaac gccggagaca tcgtagcaaa
    13501 gctgggaaag ttagtaagca ttcacaatca agatgagtgg ctgattgccg tggatttaca
    13561 gtgcggcagc ccgtggaatg cggcagcgat gcttgcgatg cgcaatcctc gtctgcgggt
    13621 aatcagcggc ctttctctgc cgctggcgct cgaactggtt gataaccagg acagcatgaa
    13681 tgttgatgaa ctgtgtgaac acctgacgca aatcgcaaag caaacctgcg ttgtctggaa
    13741 acaactggca acggcagagg aggatttctg atgaacatta cgctcgcccg cattgatgac
    13801 cgcctgatcc acggtcaggt cactaccgtc tggtcgaaag tggctaacgc ccagcgcatt
    13861 attatctgca atgacgaagt ttataacgat gaagttcgcc ggacattatt gcgtcaggct
    13921 gcgccaccgg gaatgaaggt taacgtggtc aatattgaaa aagccgtcgc tgtttatcac
    13981 aacccgcaat atcaggacga aaccgttttt tatcttttca ctcgcccaca ggatgcctta
    14041 gcgatggttc gccaaggggt aaaaatagac accctaaata ttggcggcat ggcctggcgg
    14101 cccggtaaaa aacagttaac caaagcggtt tcattagatg atgatgatat taacgcattt
    14161 catgagttaa ataatcttgg cgtcatactg gatttacgcg tcgtagcgtc agatccctca
    14221 atcaatatta tcgacaaaat aaacgaacag ttaatcgcaa attaaataat agcgcttgtg
    14281 tacatatgct ttaacaggca gggatgacga cacttaaaag gtgaaaaatc atggaaataa
    14341 gtaccctaca aatcattgct atatttcttt tttcctgtat tgccggaatg ggcagcgtgc
    14401 tggatgaatt tcagactcat cgcccgttaa ttgcctgtac ggtgattggt ttaattctcg
    14461 gtgatttaaa aaccggaata atactcggtg gtacgctgga attgatagct ctcggctgga
    14521 tgaacgtcgg cgcggcgcaa tctccggatt ctgcactcgc cagcataatc tccgccattc
    14581 tggttatcgt tggtcagcaa agcatcgcca ccggaatcgc catcgcgttg cctgtggctg
    14641 cggcaggcca ggtgctgact gtgtttgccc gtaccatcac cgtagtgttc cagcacgcgg
    14701 cggataaagc agcggaagaa gcacggtttc gcactctcga tattctgcat gtctccgcgt
    14761 ttggcgtgca ggcgctgcgc gttgctattc cggcactgat tgtctcactg ttcgtcagcg
    14821 ccgatatggt gagcaatatg ctgagcgcga taccggaatt cgtgacgcgc ggtctgcaaa
    14881 ttgctggcgg ttttatcgtg gtggtcggtt acgccatggt gctacgtatg atgggcgtga
    14941 aatatttgat gcctttcttt ttcctcggtt tcctcgcagg tggctacctc gatctcagtc
    15001 tgctggcgtt cggtggcgtc ggcgtgatca tggccctggt ctacatccag ctaaatccac
    15061 agtggcgtaa agctgaacct caactccagg ccaccgcctc caccgccctt gaccaacttg
    15121 acgattaacg gagccatcat ggaacagaga aaaattacac gcagcgatct ggtgagcatg
    15181 tttctgcgct ccaacctgca acaggcgtcc tttaactttg aacgtattca cgggctgggt
    15241 ttttgctacg acatgatccc cgccatcaaa cgactttacc cattaaaaga ggatcaggtt
    15301 gcggcgctca ggcgacacct ggtgttcttc aataccacgc cagccgtatg tggcccggtc
    15361 atcggcgtca ctgccgccat ggaagaggcg cgggccaacg gcgcggaaat tgatgacggt
    15421 accattaacg gcatcaaagt cggtctgatg ggaccattgg caggagttgg cgatccactg
    15481 gtctggggaa cgctgcgccc gattaccacc gcgctcggcg catctctggc actttcgggc
    15541 aacattctcg gcccgctgct gttcttcttt attttcaatg cggtgcgtct ggcgatgaag
    15601 tggtatggcc tacagctcgg ctttcgcaaa ggggtgaata tcgtcagcga tatgggcggg
    15661 aatgtgctgc aaaaactcac cgaaggcgcg tcgattctcg gactgtttgt gatgggcgtg
    15721 ctggtcacca aatggacgtc aatcaacgta ccgttggtgg tttcacaaac gcatgccgcc
    15781 gatggctcca ccgtcaccat gaccgtgcag aacattctcg accaactttg ccctggtttg
    15841 ctggcgctcg gtctgacgct gcttatggtt cgtctgctca acaaaaaaat taacccggta
    15901 tggctgattt tcgccctgtt tggcttaggg attatcggta atgcgctggg cttcctgtcc
    15961 agattcttcg ccccggcatg actgccgggg ccatcgctca acatgaggtg gtttatgaaa
    16021 acaacagctc tgcgtcttta tggtaaacgt gatttacgcc tggaaacctt tgaccttcct
    16081 gaaatgcagg aggatgaaat cctcgcgacg gtggtcactg acagcctgtg cctctcttcc
    16141 tggaaagagg ccaatctggg tgaaaaccat aaaaaagtac ccgacgatgt ggcgaccaac
    16201 cccatcatca tcggccacga gttttgcggc gatattctgg ccgtgggtaa aaagtggcag
    16261 cacaaattcc agccgggtca gcgttatgtg attcaggcca acctgcaact ccccgaccgc
    16321 ccggactgcc ccggctactc cttcccgtgg gtgggcggcg aagccacgca tgtggttatt
    16381 cccaacgagg tcatggaaca agattgcctg ctggcatacg acggcgaaac ctattttgaa
    16441 ggctcactgg ttgaaccgct ttcctgcgtg attggcgcgt tcaacgccaa ctatcatctt
    16501 caggaaggta gttataacca cacgatgggg attcgcccgc aagggcgcat gctgatcctc
    16561 ggcggcaccg gaccaatggg actgttggcg attgattatg cgctacatgg acccgttaac
    16621 ccgtcgcagc tcgtcattac cgataccgac aacgataaat tgagttatgc gcgcaagcac
    16681 tatccatcag aaccgcaaac actgattcat tatctcaatg ccgccgatgc agcatttgat
    16741 acgctaatgg cgctgagtgg cggtcacggc ttcgatgata ttttcgtctt tgtgcctaat
    16801 gaaggactgg tgactctcgc ctcttccttg ctggcgacag atggttgcct gaatttcttc
    16861 gccggaccgc aggataaaca tttcagcgcg ccaattaatt tctacgatgt gcattatgca
    16921 tttacccact acgtgggcac gtcaggcggc aataccgacg acatgcgcgc ggcggtcaaa
    16981 ctgattgaag agaaaaaagt gcaggccgca aaagtggtaa cacatattct tgggctgaat
    17041 gccgcgggcg aaaccacgct tgaattgcct gccgtcggcg gcggcaaaaa gctggtgtat
    17101 accgggaaat acctgccgct gacgtcactc acgcagattc aggatcaagc actggcggcg
    17161 attctggcgc gtcatcaggg gatctggtcc ggtgaggcgg agcaatatct gctcactcat
    17221 gcagaggcaa tttcccatga ttaatcgcgc tacttaactc tgcatgtcgc tggctggtcg
    17281 ccgcggcaac ttcgcgacct gatgtgcggc tgattgctga agcggcccaa tgtgcacgag
    17341 aaggataaaa aaacatcagc gccttaaggg gcgctcaaat tggtggcaaa gtacacattg
    17401 tttatgccgg atgcggaata aagccttatt cggcctacat aatctcgaaa attcaatata
    17461 ttgcagttat ctggtaggcc tggtaagcgt agcgcatcag gcaatgctgt gtttgtcatc
    17521 agtctcagct cccggtgcaa tacgtgacat cgtgagccat gtcagtaagt ggttaaattc
    17581 gcagtggtag catgccttcc gtgatttctt actaaccgga gaagtaatgg aactgctttt
    17641 attgagtaac tcgacgctgc cgggtaaagc ctggctggaa catgcactgc cgctaattgc
    17701 tgaacagttg cagggtcgcc gctcagcggt gtttatccct ttcgctggcg taacgcagac
    17761 ctgggatgat tacacagcga aaacggctgc ggttctcgct ccgctgggtg tttctgtcac
    17821 cggtattcat agcgttgtcg atcccgttgc cgcgattgaa aatgctgaga tcgtgattgt
    17881 cggcggcggg aatactttcc agttgctgaa acagtgccgc gagcgcgggc tgctggcacc
    17941 aattactgac gtggttaaac gtggtgcgct gtatattggc tggagcgcag gcgctaacct
    18001 tgcttgccca accattcgta ccaccaacga tatgccgatt gtcgatccgc aaggtttcga
    18061 tgcgctaaat ctgttcccgt tgcaaatcaa cccgcacttc accaacgcgc tgccggaagg
    18121 ccataaaggt gaaacccgtg agcagcgtat tcgcgaactg ctggtcgtcg cgccagaact
    18181 gacgattatt ggtctaccgg aagataactg gatcacagtg agtaaaggtc acgctacgct
    18241 gggtggcccg aacaccacct atgtgtttaa ggccggtgaa gaagcggttc cgctggaagc
    18301 tggtcaccgt ttttaagtga attgccggat gcatgatccg gcatcttgtt catagtgcct
    18361 gatgcgacgc ttgacgcgtc ttatcaggcc tacaggattc acaatattaa tactcgtccc
    18421 gtccttcatc ttcatccgac tgttccagca cactgtaagc caccgaacaa aacagcgagt
    18481 tcaggcgctg catatctccc agtaagccta aatgtagcga actggtttca atgctctgca
    18541 cgttttgctg atgcaggcga tcgacgtggg cgtgggaata gcggcgatta agaatgcgaa
    18601 agcgatgctt actacggcgc aaacgacgag cgctggtgac atcgccagag aagaacaccg
    18661 acattgccag ctttaaatta ctgagcaatt gctcatagag cgcatccagt tccttcaacc
    18721 catcaagcga aaatgcccgc cgtgctgcca gtgatttgtc agcaatttcg ctgcccatgc
    18781 gctcgacgat atcggaggcc tgttcaaggt tgagcgacat ttcaataatc tccgcccagc
    18841 ggcgcgactc ttcctccgcc agctcttctt ttggcatccg cgccagatac agcttaatgg
    18901 cggtgtagag aacgttgata tcatctgcca gcttacgcag ctctttctcc tgccgtggct
    18961 caccgtgcat cactttattc aacccttcca tcatctgttc catggcgtcg ccaatgcgca
    19021 gggtttcgcg cgcggcgttc gccagagcaa gcgtgggcgt atccagcgcg ctgacatcca
    19081 gatgtttagg ccgtagctgg gtatccagtt ccggttcatc gcgaataatc gttttgcaaa
    19141 accgtgccat cgggtcaaca aatggcagca tgaccaggca acgtacaagg ttgtagaaga
    19201 cgtggaaata gatcaccagt tccgcttttg gcaatgacag cttccccatt gtctctgcca
    19261 gcaaatggac aaacggcagg ataatcaggc tacccaccag cttaaacagc agactaccca
    19321 gcgcgacacg gcgggctgcg gcattggcgg cactgttgtt gagcatcgcc agcaggccgg
    19381 aaccgaggtt agcaccaatc accagacaga gcgccacggg gaaggagata atgcctgcgg
    19441 cggtcagagc cgcggtcagc agtacagcag caaggctgga gtagctgata atggcgaaca
    19501 tcgcgccaat cagcgcatcc agcagaatat cgccggtcag cgaggcaaag atcacctgaa
    19561 cgccgtttgc ctgggtgatc ggcgttacgg cctgcacaat caactccagc gccagcaaaa
    19621 tcagcccaag accaataccg acgcggccca gttgcccggc gcgtgactgt ttgcgtccga
    19681 ggaaaaaaat cacgccgata aaaataagta acggtgacag ccaggataag tcgaaggtga
    19741 gaatacgcgc cattagcgcc gtcccgacat ctgcccccag cacaatgacc agagccggtg
    19801 cgagggctac cagatcctga gcgacgaacg aggtcaccag catggtggtg gcattactgc
    19861 tctgtaccag tgcggtaacg ccgatccccg cgcaaaaggc gagcggcttt ttttcgacgc
    19921 tccggctaag gacagtacgc aaacgcgcgc cgaagacgcg cattacgccg gttcgaacaa
    19981 tatgagtccc ccagaccagc agggcgacgg cagaaagcag gtgaagcagc gttaacacga
    20041 gttcaggttc tccttatcgt tatatgttcc tgaagcaatt gaatgaccaa aggaccggaa
    20101 acacgctgac tggcatcttt actgtgcctt ttgacattcg tttttccggc taagattatt
    20161 ccagcctgat tccagtataa gtgtttcata ttaataaaga gacagggcac tcattgagcg
    20221 ccctgtttgt tgtaaggaaa agtgacagat ttgtgaatca gtccgcgtca taccccagat
    20281 tcggtgccag ccagcgctca acatctgaga cgctcatacc tttacggcgg gcatagtctt
    20341 caacctgatc gcgctgaatt tgcgccacgg cgtagtactt gctgtccggg tggctgaaat
    20401 accaacccga aaccgatgca ccgggccaca tggcgaaaga ttctgtgagt ttcatgccgg
    20461 tatgtttttc cacttccagc agctcccaga tggtggcttt ttccgtatgt tccgggcagg
    20521 ccgggtagcc cggtgccgga cggatgccct ggtagttttc gcggatcagt tcttcgttgc
    20581 tgaggttctc gttcggcgca tagccccagt agactttacg cacacgctca tggagatact
    20641 ccgcaaaggc ttcggctaaa cggtcggcaa gcgctttcac catgattttg ttgtaatcat
    20701 cgtgctgcgc ttcaaaggca tcagccagtg cgtcctcttc cagcccgcca gtcacggcaa
    20761 atgcgccgat gtaatctgct ttaccagaaa gcttcggcgc aacgaagtca gcgagacagt
    20821 agttagcgaa tcccgttttt tcggtctgtt gacgcagatg gtggctgaca ttgatcacat
    20881 gggtgcgcgt ttcgtcacgg tagatttcaa tgtcatcgcc cacacggttt gccgggaaca
    20941 ggcccaccac gccacgccac gcggattcag cgttttctcg gcgcttaatt tatccagcat
    21001 gtcgttggcg tctttaaaca gccgctgcgc ctcaacgccc accacttcat cttccagaat
    21061 gcgcggatac ttcccggcca gcgaccaggt cataaagaac ggtgtccagt cgatgcaatt
    21121 acgcagagtt tcgatgctgg cttcaacttc ctgcacgccg agacggtgcg ccaccggcgg
    21181 cgtgtaagcc tgccagtcaa aagcgaagtc gttatcgcgc gccgcttcca gcgtgaccgg
    21241 tggtgtgcgc ggtttcttgc gcccgtgctg aatacgtacg gtttcgtact ccttgcgggt
    21301 acgagcgaca aaatcatcgc gctgagtatc ggaaagcagc gccgccacca caccaacggt
    21361 gcgcgaggca ttctgcacat acaccgtcgg gccgctgtag ttctgctcaa ttttcaccgc
    21421 cgtgtgcgct tttgaggtgg tcgcgccacc gatcagtaac ggaatggtga agccctgacg
    21481 ctccatctct ttcgccacgt taaccatctc gtccagcgac ggcgtgataa gccccgaaag
    21541 gccaatcaaa tcagcattca cttctttagc agtacggaga attttttccg caggcaccat
    21601 cacgccgaga tcgacaattt cgtagttgtt acattgcagc accacgccaa cgatattttt
    21661 accgatatcg tggacgtcgc ccttcacggt ggcgatcacc atcttgccgt tggttttgcc
    21721 ctgctctttg ctggcttcaa taaacggttc gagatacgcc accgcctgtt tcatgacgcg
    21781 cgccgatttg accacctgtg gcaggaacat tttgccttcg ccaaacagat cgccgaccac
    21841 gttcatgccg tccatcaacg ggccttcaat cacttcaatc gggcgcgtag cctgctggcg
    21901 ggcttcttcg gtatcctgct cgataaactc ggtaatgcct ttgaccagcg agtattccag
    21961 acgtttattc acttcccacg agcgccactc cgcctgctgg gcgttatcgg tgtcgtcggt
    22021 tttgctgccg cgatatttct cggcaagctc cagtaaacgc tcagtgccat cgtcacgacg
    22081 attaagaatc acatcttcca ccgcgtcgcg cagttcagcg ggtaggtcgt cgtaaatcgc
    22141 cagttgcccc gcgttgacga tccccatatc catgccattg cgaatagcgt agtagaggaa
    22201 cactgcgtga atggcttcgc gcaccggatc gttgccacgg aatgagaaag aaacgttaga
    22261 tacgccgccg gaaatcagcg cgtgcggcag ttcgcgtttg atgtcttcac acgcgccgat
    22321 aaagtcctgc gcgtagttgt tgtgctcttc aataccggtg gcgaccgcga agatgttcgg
    22381 gtcgaagatg atatcttctg gcgggaagcc aacctcttcg gtgaggattt tgtacgcccg
    22441 acggcaaatc tcgattttcc gtgcgcgagt atcggcctgt ccctgttcat caaaggccat
    22501 caccaccact gccgcaccgt agcgacgcaa caatttcgcg tgatggataa aggcgtcgac
    22561 gccctctttc atcgagattg agttaacaat gcctttgccc tgaatacact tcagcccttt
    22621 ttcgataacg tcccattttg aggagtcgat cataatcggc acgcgagcga tatccggttc
    22681 accggcaatc agattgagaa aacgcaccat cgccgcttcg gcatcgagca tcccttcatc
    22741 catgttgata tcgataatct gcgcgccgtt ttccacctgc tgacgcgcca catcctgcgc
    22801 ctcgctgtat ttctcttctt tgatcaggcg cttgaactta gcagagccgg tgacgttggt
    22861 gcgttcaccc acgttcacaa acaggctatc gtcgccaatg ttcagcggct ccaggccaga
    22921 caaacggcag gctacgggaa tttccggcag tttgcgcggc gctaatcctt ctactgcacg
    22981 actcatcgct gcaatatgtt gcggcgtggt cccgcagcaa ccaccgacga tattgagaaa
    23041 gcccgcttgc gcccattcac gtatctgttt tgccatcgtg tcggcgtcga gatcgtattc
    23101 accaaaggcg ttaggcagcc cggcgttcgg gtgggcggtg acgtagcatt ccgcaatccg
    23161 tgatagttcc tgcacgtact ggcgcagttc atcgggcccc agcgcacagt tcaggccaaa
    23221 ggttagcgct tcggcgtggc gcaatgagtt gtaaaatgct tcggtggtct gcccggagag
    23281 cgtgcgcccg gaggcgtcgg tgatggtgcc ggagatcata atcggcagct caacgcccag
    23341 cgcttcaaac tccgttttca ccgcaaaaac cgccgctttg gcgttaaggg tgtcgaaaac
    23401 ggtttcaatc aggatcagat ccgcaccacc ttccaccagc gctttggtgg attcgcgata
    23461 ggccgccacc agctggtcaa aagtgatgtt gcggaatgcc ggatcgttga cgtccggaga
    23521 aatagacgcc gtgcggttgg ttgggccgag aacaccggca acgtagcgcg gtttctccgg
    23581 cgtgcgcgcg gtccactcgt cagcacaggc gcgcgccagt ttcgccgccg caaagttgat
    23641 ttccgccgac agggattcca tctggtaatc cgccatcgca atggtcgtgg agttgaaggt
    23701 gttggtttcg atgatatccg cgcccgcttc aaagtaggcg ttgtggatag cggcgatcac
    23761 ttccggtttg ctgagcacca gcaggtcgtt gttgcctttg agatcgcatg gccagtcggc
    23821 aaagcgttca ccacgaaaat cggcttcgtt cagtcgataa ctctggatca tggtgcccat
    23881 accgccgtcc agcaccagaa tacgttcatt taactgcgca cgcagttgtt ccactttgct
    23941 gctcacactt gctcccgaca cgctcaaccc agatttaata aaaattcaac aaaccatact
    24001 ggcataaacg catctgtggt aaaagcgacc accacgcaac atgagatttg ttcaacatta
    24061 actcatcgga tcagttcagc aactattgca ttagctaaca ataaaaatga aaatgattcc
    24121 cacgatacag aaaaaggaga ctgtcatggt cgcacccatt cccgcgaaac gcggcagaaa
    24181 acccgccgtt gccaccgcac cagcgactgg acaggttcag tctttaacgc gtggcctgaa
    24241 attactggag tggattgccg aatccaatgg cagtgtggca ctcacggaac tggcgcaaca
    24301 agccgggtta cccaattcca cgacccaccg cctgctaacc acaatgcaac agcagggttt
    24361 cgtgcgtcag gttggcgaac tgggacactg ggcaatcggc gcacatgcct ttatggtcgg
    24421 cagcagcttt ctccagagtc gtaatttgtt agcaattgtt caccctatcc tgcgcaatct
    24481 aatggaagag tctggcgaaa cggtcaatat ggcggtgctt gatcaaagcg atcacgaagc
    24541 gattattatc gaccaggtac agtgtacgca tctgatgcga atgtccgcgc ctatcggcgg
    24601 taaattgccg atgcacgctt ccggtgcagg taaagccttt ttagcccaac tgagcgaaga
    24661 acaggtgacg aagctgctgc accgcaaagg gttacatgcc tatacccacg caacgctggt
    24721 gtctcctgtg catttaaaag aagatctcgc ccaaacgcgc aaacggggtt attcatttga
    24781 cgatgaggaa catgcgctgg ggctacgttg ccttgcagcg tgtattttcg atgagcaccg
    24841 tgaaccgttt gccgcaattt ctatttccgg accgatttca cgtattaccg atgaccgcgt
    24901 gaccgagttt ggcgcaatgg tgattaaagc ggcgaaggaa gtgacactgg cgtacggtgg
    24961 aatgcgctga ctttttctgg cgggcagagg caatattctg cccatcat
//
LOCUS       DADMIB010000047        24874 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.047, whole genome shotgun sequence.
ACCESSION   DADMIB010000047 DADMIB010000000
VERSION     DADMIB010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24874)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24874)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24874
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.047"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..336)
                     /locus_tag="JNZ89_001820"
     CDS             complement(<1..336)
                     /locus_tag="JNZ89_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935728.1"
                     /translation="MTEIQRLLTETIESLNTREKRDNKPRFSISFIRKHPGLFIGMYV
                     AFFATLAVMLQSETLSGSVWLLVVLFILLNGFFFFDVYPRYRYEDIDVLDFRVCYNGE
                     WYNTRFVPAA"
     gene            complement(452..1003)
                     /gene="maa"
                     /locus_tag="JNZ89_001821"
     CDS             complement(452..1003)
                     /gene="maa"
                     /locus_tag="JNZ89_001821"
                     /EC_number="2.3.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HAY8935729.1"
                     /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHT
                     LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML
                     APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA
                     VVTKGVPDNVVVGGNPARIIKKL"
     gene            complement(1175..1393)
                     /gene="hha"
                     /locus_tag="JNZ89_001822"
     CDS             complement(1175..1393)
                     /gene="hha"
                     /locus_tag="JNZ89_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HAY8935730.1"
                     /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
                     SAADHRLAELTMNKLYDKIPSSVWKFIR"
     gene            complement(1419..1793)
                     /gene="tomB"
                     /locus_tag="JNZ89_001823"
     CDS             complement(1419..1793)
                     /gene="tomB"
                     /locus_tag="JNZ89_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hha toxicity modulator TomB"
                     /protein_id="HAY8935731.1"
                     /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNYGWVNDPTSAI
                     NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRK
                     SGNRLFRCFVNATKENPASLSC"
     gene            complement(2339..5488)
                     /locus_tag="JNZ89_001824"
     CDS             complement(2339..5488)
                     /locus_tag="JNZ89_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HAY8935732.1"
                     /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
                     ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
                     AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
                     NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ
                     LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD
                     IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK
                     ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG
                     KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD
                     EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT
                     GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF
                     ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG
                     VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM
                     VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG
                     YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
                     AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL
                     RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR
                     RRFSRKNEDIEHSHTVDHH"
     gene            complement(5511..6704)
                     /gene="acrA"
                     /locus_tag="JNZ89_001825"
     CDS             complement(5511..6704)
                     /gene="acrA"
                     /locus_tag="JNZ89_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrA"
                     /protein_id="HAY8935733.1"
                     /translation="MNKNRGFTPLAVVLMLSGSLALTGCDNKQAQQGGQQMPAVGVVT
                     VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ
                     ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA
                     KAAVETARINLAYTKVTAPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ
                     SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL
                     RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET
                     RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP
                     EQSKS"
     gene            6846..7493
                     /gene="acrR"
                     /locus_tag="JNZ89_001826"
     CDS             6846..7493
                     /gene="acrR"
                     /locus_tag="JNZ89_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrR"
                     /protein_id="HAY8935734.1"
                     /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT
                     RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT
                     EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT
                     RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE"
     gene            7621..10983
                     /gene="mscK"
                     /locus_tag="JNZ89_001827"
     CDS             7621..10983
                     /gene="mscK"
                     /locus_tag="JNZ89_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HAY8935735.1"
                     /translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK
                     ADLQAQLDSLNKQKDLSAQDKLELQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM
                     RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS
                     LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ
                     RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD
                     EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE
                     QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF
                     VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV
                     SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWEKAWPAVFIAFL
                     AGLPLLLIVGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI
                     ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS
                     HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES
                     WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLSGRWIETVYLVIIWNLLYQ
                     TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM
                     FALFGVMFWAIWSDLITVFSYIDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA
                     WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW
                     LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT
                     DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP
                     RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF
                     NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG"
     gene            complement(11195..11356)
                     /gene="rsmS"
                     /locus_tag="JNZ89_001828"
     CDS             complement(11195..11356)
                     /gene="rsmS"
                     /locus_tag="JNZ89_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pleiotropic regulatory protein RsmS"
                     /protein_id="HAY8935736.1"
                     /translation="MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKK
                     LTRDDEAEK"
     gene            complement(11370..11897)
                     /gene="priC"
                     /locus_tag="JNZ89_001829"
     CDS             complement(11370..11897)
                     /gene="priC"
                     /locus_tag="JNZ89_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N''"
                     /protein_id="HAY8935737.1"
                     /translation="MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRTT
                     TLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP
                     PKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR
                     HALEKIENRLARLTR"
     gene            11967..12344
                     /locus_tag="JNZ89_001830"
     CDS             11967..12344
                     /locus_tag="JNZ89_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HAY8935738.1"
                     /translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP
                     RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL
                     VILACLLFYMWRIPVIDEKQEKH"
     gene            12497..13048
                     /gene="apt"
                     /locus_tag="JNZ89_001831"
     CDS             12497..13048
                     /gene="apt"
                     /locus_tag="JNZ89_001831"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HAY8935739.1"
                     /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
                     IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL
                     EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD
                     LGGEQRLEKQGITSYSLVPFPGH"
     gene            13177..15048
                     /gene="dnaX"
                     /locus_tag="JNZ89_001832"
     CDS             13177..15048
                     /gene="dnaX"
                     /locus_tag="JNZ89_001832"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HAY8935740.1"
                     /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
                     GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
                     DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ
                     KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL
                     SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI
                     EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI
                     GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ
                     PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVPSALEKAP
                     AKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAARVS
                     QLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSTLKGSTVEL
                     TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI"
     gene            15101..15430
                     /locus_tag="JNZ89_001833"
     CDS             15101..15430
                     /locus_tag="JNZ89_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HAY8935741.1"
                     /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
                     PGFKMPF"
     gene            15430..16035
                     /gene="recR"
                     /locus_tag="JNZ89_001834"
     CDS             15430..16035
                     /gene="recR"
                     /locus_tag="JNZ89_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HAY8935742.1"
                     /translation="MQTSPLLTQLMEALRCLSGVGPKSAQRMAFTLLQRDRSGGMRLA
                     QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS
                     GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
                     CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF"
     gene            16145..18019
                     /gene="htpG"
                     /locus_tag="JNZ89_001835"
     CDS             16145..18019
                     /gene="htpG"
                     /locus_tag="JNZ89_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003903109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HAY8935743.1"
                     /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
                     KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT
                     KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG
                     EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
                     ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS
                     LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV
                     SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN
                     QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL
                     RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL
                     TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY
                     IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
                     "
     gene            18200..18844
                     /gene="adk"
                     /locus_tag="JNZ89_001836"
     CDS             18200..18844
                     /gene="adk"
                     /locus_tag="JNZ89_001836"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HAY8935744.1"
                     /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
                     LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN
                     VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ
                     EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG"
     gene            18976..19938
                     /gene="hemH"
                     /locus_tag="JNZ89_001837"
     CDS             18976..19938
                     /gene="hemH"
                     /locus_tag="JNZ89_001837"
                     /EC_number="4.99.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HAY8935745.1"
                     /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL
                     WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPETPVALGMSY
                     GSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR
                     DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTREL
                     ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET
                     LEEIAEQNREVFLGAGGKKYEYIPALNATPEYIEMMANLVAAYR"
     gene            complement(19935..20894)
                     /gene="aes"
                     /locus_tag="JNZ89_001838"
     CDS             complement(19935..20894)
                     /gene="aes"
                     /locus_tag="JNZ89_001838"
                     /EC_number="3.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl esterase"
                     /protein_id="HAY8935746.1"
                     /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPSWPATGTIAEQRQYY
                     TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT
                     HDRIMRLLASYSQCTVIGIDYPLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG
                     FAGDSAGAMLALASALWLRDKQIDCGKIAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ
                     QDLQMYEEAYLSNDADHESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA
                     AHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL"
     gene            21046..22350
                     /locus_tag="JNZ89_001839"
     CDS             21046..22350
                     /locus_tag="JNZ89_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/guanosine kinase"
                     /protein_id="HAY8935747.1"
                     /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV
                     DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY
                     SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG
                     ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK
                     YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD
                     WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL
                     RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
                     SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR"
     gene            complement(22483..24159)
                     /locus_tag="JNZ89_001840"
     CDS             complement(22483..24159)
                     /locus_tag="JNZ89_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HAY8935748.1"
                     /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG
                     PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLL
                     GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV
                     MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS
                     AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
                     LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTA
                     LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA
                     KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPMVVIETSR
                     TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD
                     IEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG"
     gene            complement(24397..>24874)
                     /locus_tag="JNZ89_001841"
     CDS             complement(24397..>24874)
                     /locus_tag="JNZ89_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8935749.1"
                     /translation="YYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGR
                     KYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGM
                     VSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD"
BASE COUNT         6216 a         6482 c         6388 g         5788 t
ORIGIN      
        1 cgcggcaggt acaaagcgcg tgttgtacca ttcgccgtta tagcaaacgc ggaaatccag
       61 cacgtcgata tcttcatagc ggtagcgtgg gtagacatcg aaaaagaaga aaccattaag
      121 caggataaat aatacaacca gtagccagac agagcctgac agcgtttcgg actgcaacat
      181 caccgccagg gtggcaaaaa aagcaacgta cataccgata aacagccccg gatgtttacg
      241 gataaaactg atactaaagc ggggtttgtt gtcgcgtttt tcgcgggtat tcagagactc
      301 aatcgtttcg gtcagcaggc gttgtatttc ggtcatcgtt tgccttcgtg gtatctgcaa
      361 ctttccaggg aacaccctat tttaacgtgg gaatagtaga ggggaagtaa cagatctacc
      421 acaattttgc ataacagttg cgaaaaaccg attacaattt tttaattatt ctggctggat
      481 taccgcccac gacaacgttg tccgggacac cttttgtgac aactgcacct gaagctacca
      541 cgacgttatc accaatggtc acaccagggt taatgaccgc gcgtccgcca atccagacgt
      601 tattaccgat ggtgacgggt ttccccagtt cagcaccgct attacgtgct acagggtcga
      661 tgggatgtgt tgccgtgtag atatgaacgc ctggtgccaa catacagtta tcaccgatgc
      721 gaatagggca gacatcaagc atcacgcaat cgaagttggc gaaaaaatta ttgccgagaa
      781 aaatgttata gccataatca cagcgaaacg ttggctcaat ataagcctct gtcacctgac
      841 cgaataaatc agcgagaatt tgctggcgta atgtgtgctc ttccgccagg gaatgattgt
      901 atcggtgaat aagctgacga gcgcgcaggc gatcgcgaga taacgtctca tctgccgagc
      961 gatacaactc accagcaatc atcttttctt tttctgtgct cattactgac ctccggttgc
     1021 tgaaaatgcg gcaacacagt aagacgaaaa gtcagtgaac agaacgttcc cattacatct
     1081 gtgtgataaa gatcacatag ggtatgtctt catggtgaaa aagtataaaa ttcttaataa
     1141 acagccggtt atagctccga aagcgaatta tttattagcg aataaatttc catactgagg
     1201 aagggatctt gtcgtatagt ttattcatgg tcaattcggc gaggcggtga tctgcggctg
     1261 agtaaaatac cgccagttca ttatctgata attcgtattt atttttctcg ataacacgct
     1321 ccagcgtgtc aattgtctgg caacgacgta aacgcattaa ataatcggtt ttcgttaaag
     1381 gtttttcgga catacttcta cccatggttg taataattct aacaagataa actcgcagga
     1441 ttctctttcg tcgcattgac aaaacaacgg aatagtcgat tacctgactt ccgccatttc
     1501 tgaagatcct gcatattaat accataacta ctgaacaaca taaaggtgtc atccagatat
     1561 tcgtcgatct gctcaatgag cttattgtct tcattatact taattttgta attaagtgcg
     1621 aaggtcgcaa tatgctcaat cagttcattc aactggaggt tgatcgccga ggttgggtcg
     1681 ttaacccagc cataattgct ttcttcaagg tttgcaaggc agtcatgata cagggtttca
     1741 cagagaaact taagctgtgc gatatcatgt cttttgggtg agtattcatc cataacgcgt
     1801 ccccttctta gcggttgaac taacggacac ctttcgggat ggaaaaaact tactgacctg
     1861 gacttgccct ctcgtttgtt agcttaacta taagccactc tttgcaggta ttcatcgcat
     1921 tattacgaaa aattacaatt aggaaggaat cgggacagga ctcacttttt catactagca
     1981 ctaacccgca gcaggtaaaa gcagtttgct cgaactgttc ataacatttc aggattatcg
     2041 ccagatgaaa ttggtgacac taataccagg attgctctga atatgacgta ataaccgagg
     2101 aatgaataaa gaattaccgc aaataattaa gaatagcctc taaatgatta tggattatta
     2161 aatctattag cgctacttaa tataaattaa ctaacaatca gtatttttta tgaattttat
     2221 ccgtggttaa tactggtttt cgtatgagat cctgagttgg tggttcaatt actccttaat
     2281 gttcgtaggt tatgcataaa aaaggccgct tgcgcggcct tagtgattac acgttgtatc
     2341 aatgatgatc gacagtatgg ctgtgctcga tatcttcatt cttgcggcta aagcggcggc
     2401 gaaccaccac aaagaatacc ggaacgaaga agattgccag taccgttgcg gtcaccatcc
     2461 cgcccattac accggtacct actgcgttct gcgcgccgga accagcacca gtactgataa
     2521 ccagcggcat aacgccgagg ataaacgcca gcgaggtcat caggatcgga cgtaaacgca
     2581 tccgcactgc atcaagcgtc gcttcaatca gacctttacc ttctttatcc atcaagtctt
     2641 tggcgaattc gacgataagt atcgcgttct tcgccgacaa cccaatggtt gtgagcaggc
     2701 ctacttggaa gtaaacgtca ttggtcaggc cacggaaggt ggcagccagc aacgcaccga
     2761 taacccccag cggaacgacc agcataacgg agaacggaat cgaccagctc tcgtacagcg
     2821 ccgctagaca caggaatacg acaatcaacg aaatcgcgta cagtgaagga gcctggttgc
     2881 cggagaggcg ttcctgatag gacatccccg tccagtcata gccaacaccg gtaggcagtt
     2941 tgctcgccag ttgttccatt agctccattg cttcaccggt acttttaccc ggtgccgcct
     3001 ggcctaagat ttccatggat ggcaggccat tgtaacgttc cagacgcggc gaaccgtact
     3061 cccaacgaga agaggagaat gccgagaacg gcaccatctg accatcagca gcacgaacat
     3121 accagtcgcc gatatcatcc ggcagcatac ggtatttcgc ttctgacatg acgtaaactt
     3181 tcttcacacg accgcggtcg ataaagtcgt tcacatagct accgccccat gcagcgccca
     3241 gagtggtgtt aatgtcgttg atagaaacac ccagcgcctg cgctttttcc tggtcgatat
     3301 caatcttaaa ctgcggggta tcttccagac cgtttggacg tacgctggtc aacatatcag
     3361 gatgctttgc tgcttctgca agcagctggt tacgcgcctg agtcagtttt tcgtgaccaa
     3421 ggccagcctg gtcaatcagc tcaaagtcaa agccggttgc agtacccagt tccacgattg
     3481 cgggcaggtt aaaggcgaaa accatcgcat ctttgatttg cgagaaagcg cgtgttgcac
     3541 gcatggtaat cgcttcaact ttgttttctt cgcccggacg atcggcccag tccttcaagg
     3601 aaacgaacgc aataccggta ttctgaccac gtcccgcaaa gccgaagccg ttaacggcga
     3661 acaccgactc aacgttgttc ttttctttgg tcagatagta atgcgttacc tcattgagca
     3721 ctttctgcgt acgttcctgc gttgcacctg ctggcagctg aaccatggtc ataaatacgc
     3781 cctggtcctc atctggcaag aaggagcttg gcagacgcac gaacagatag gccatgccga
     3841 ccacgatgat cagatacagc accaggtaac gccccgtact gcgcagaata ccgcctacgc
     3901 tgtcggtgta gtggtgcgtg ctcttctcga acatgcggtt aaaccagccg aagaagcctt
     3961 ttttaccttc cccgtgatcg cctttggcaa tcggtttcag catggtggca caaagagccg
     4021 gagtcaggat caacgctacc agtaccgaca gcgccattgc tgaaacaatg gtaatagaga
     4081 actgacgata gatagcacca gtagaaccgc caaagaaggc catcggtacg aataccgctg
     4141 acagtaccat cgcgataccg accagagcgc cctgaatctg ccccatcgac ttacgggtag
     4201 cttcttttgg cggcaaacct tcttccgcca taacacgctc cacgttttct accacaacga
     4261 tagcgtcatc caccaacaag ccgatggcga gcaccatccc gaacattgtt agcgtgttta
     4321 tcgagaagcc aaaggcggca aggacggcaa aggtcccgag caataccacc ggtacggcaa
     4381 tggtcggaat caacgtcgcg cggaagttct gcaggaacag atacataacc aggaacacga
     4441 ggatgatcgc ttcgaccagc gttttaacca cttcgtgaat agagattttc acgaacggcg
     4501 tggtgtcgta cgggtaaaca attttcagac ccgacgggaa gaacggttcc atcttcgcca
     4561 gttcagcacg gattgccgca gcggtatcca gcgcatttgc accggtcgcc agcttgatcc
     4621 ccagaccgga agccggttgg ccgttaaact ctgcgatgat gtcgtagttc tcaccaccca
     4681 gctcaatctt cgccacatca cgcagcagga cgcgggaacc atcctgattc actttcagca
     4741 ggattttgcc gaactcttca gtagaggtca gacgcgtctg agcaataata gaggcgttaa
     4801 gctgttggcc tttcaccggc ggcgtaccac cgagctgacc cgccgcaacc tgggcgttct
     4861 gcgctttgat ggcggtaatg acatcaaccg gcgttagctg gaatttgttc agctcattcg
     4921 ggttcatcca gatacgcatc gcgtactgtg aaccgaacaa ctgaacatca cccacgcccg
     4981 acgtacggct gatggcatct ttcatattcg ccgctacgta gtcagagata tcctcctgcg
     5041 tcatggtgcc atcggtgttg ataacgccga caaccatcag gaagctgctg gatgatttct
     5101 caacgctcac cccttgctgc tgaacttctt gcggcagcaa cggcatcgcc agctgcagtt
     5161 tgttctgcac ctgaacctgc gcgatatccg catcagtacc agactcaaag gtcagggtga
     5221 tctgcacggt ccccgtggag tcactgttag aggacatgta catcaggtta tcgataccgt
     5281 tcatattctg ttcgataacc tgtgtcaccg tgtcctgcac tgttttcgca tcagcgccgg
     5341 ggtaggaggc ggagatcgtt actgccggcg gtgcaatcgt aggatattgc gccaccggca
     5401 gtttgaggat cgccagcccc cctgccaaca tgatgataat ggcgatcacc cacgcaaaaa
     5461 tcgggcgatc gataaagaaa ttaggcatgt cttaacggct cctgtttaag ttaagacttg
     5521 gactgttcag gctgagcacc gcttgcggct tgctggttat tatcagcggt aacttcttgt
     5581 gcttttacct ggacaccagg acgcactttc tgcagcccac ttattactac gcgatcgcct
     5641 gctttcagac cttctgtcac cagccactta tcgccaatag cctggcttgc aacgatcgga
     5701 cgggtttcca ctttgtcatc cgcgccaact accagtacgg tggcatcacc acgcggcgta
     5761 cgggttacgc cctgttgcgg gactaaaata gcgtttggat taagcccttc ttccagacgt
     5821 gcgcgcacga acatacccgg cagcagagtg tgatccgggt tcgggaagat agcgcgtagg
     5881 gtgatagacc cagtggtctg atcaacggta acgtcagaga attccagcgt accgtcctgc
     5941 gggaacttaa tgccgtcact ggtgatcagc gacactttgg ctttgccgtt ctcttgtttc
     6001 agcgtgccat tcgccagttc ctgtttcagg cgcaggaagt cgttgctgga ctgggtcaca
     6061 tcaacgtaga tcggatcaag ttgctgcacg gttgccagcg cagtcgcctg accgttctgt
     6121 accaatgcgc cttccgtcac gttcgactta ccaatgcgac cgctaatcgg agcggtgact
     6181 ttggtgtaag ccagattgat ccgcgcagtt tcaacggcag ctttcgccgc agttaccgca
     6241 gcattcgcct gttgcgcatc agccagagcc tgatcgtact cttgcttact gatgtactga
     6301 gtaccgagca gtttctgata acgattcacc gtcaattgcg cgatattggc tgcagcctgg
     6361 gctttcgcca gatcaccttt cgcactgtcg tatgtcgcct gataggtcgc aggatcaatc
     6421 tgatagagag agacaccagc ttcgatgtcg ctaccttctt tgaaattacg cttcaggata
     6481 atcccgctaa cttgaggacg aacttctgcg atccggtagg cactggtgcg acccggaagc
     6541 tcggttgtga tctgcagagg ttcagttttg actgttacta cgccaacggc gggcatctgc
     6601 tggccacctt gttgggcctg tttgttgtca catcctgtta gggctaagct gcctgagagc
     6661 atcagaacga ccgccagagg cgtaaaccct ctgtttttgt tcatatgtaa acctcgagtg
     6721 tccgatttca aattggtcaa tggtcaaaag ttaataaacc cattgctgcg tttatattat
     6781 cgtcgtgcta tggtacatac attcacaaat gtatgtaaat ctaacgcctg taaattcacg
     6841 aacatatggc acgaaaaacc aaacaagaag cgcaagaaac gcgccaacac atcctcgatg
     6901 tggctctacg tcttttctca cagcaggggg tatcatccac ctcgctgggt gagattgcaa
     6961 aagcagctgg cgttacgcgc ggtgcaatct actggcattt taaagacaag tcggatttgt
     7021 tcagtgagat ctgggaactg tcagaatcca atattggtga actagagctt gagtatcagg
     7081 caaaattccc tggcgatcca ctctcagtat taagagagat attaattcat gttcttgaat
     7141 ccacggtgac agaagaacga cgtcgattat tgatggagat tatattccac aaatgcgaat
     7201 ttgtcggaga aatggctgtt gtgcaacagg cacaacgtaa tctctgtctg gaaagttatg
     7261 accgtataga acaaacgtta aaacattgta ttgaagcgaa aatgttgcct gcggatttaa
     7321 tgacgcgtcg ggcagcaatt attatgcgcg gctatatttc cggcctgatg gaaaactggc
     7381 tctttgcccc gcaatctttt gatcttaaaa aagaagcccg cgattacgtc gccatcttac
     7441 tggagatgta tctcctgtgc cccacgcttc gtaatcctgc cactaacgaa taaccctgaa
     7501 tctgactcca ggatttttcc tggacatttt cgtcgttgct attctggttc actgcgtcgt
     7561 gatattcttg cggtttgact ttttcaggtc gttcttcagg ttcagaaacc ttcattcatc
     7621 atgactatgt tccagtatta caaacgatca cggcattttg ttttttcagc atttattgct
     7681 tttgtttttg tcttgttatg ccagaacacg gcgtttgcgc gggcgtcatc gaatggtgat
     7741 ctgccgacaa aagcggacct gcaggcgcaa cttgactcac taaataaaca aaaagatctt
     7801 tctgctcagg acaaactgga gctgcaggat ctgacagata cattagccac cctcgataaa
     7861 atcgatcgca taaaagaaga gacagttcag ctacggcaaa aagtcgctga agcgccggaa
     7921 aaaatgcgcc aggcgaccgc ggcgttaaca gcacttagcg atgtcgataa cgacgaagaa
     7981 acgcgcaaaa ttctgagtac gctttcgttg cgccagctgg aaactcgcgt tgcccaggcg
     8041 ctggacgatt tgcaaaacgc acaaaacgat ctggcgtctt ataacagcca gctggtttcg
     8101 ttacagacgc agcccgaacg cgtgcaaaat gcgatgtata acgcttcgca gcagctgcaa
     8161 caaattcgca gtcgtctgga tgggactgat gtcggcgaga ctgccttacg tcccagccag
     8221 aaagtgttaa tgcaggctca gcaggcgttg ctgaatgcgg agattgacca gcagcgtaaa
     8281 agcctggaag ggaacaccgt cttgcaggat accttgcaaa agcaacgtga ttacgtgacg
     8341 gcgaacagcg cccgtctgga gcaccagttg cagctgttgc aagaagcggt aaacagcaag
     8401 cgcctgactt taactgaaaa aacggcgcag gaagccgtct ccccggatga agccgcgcgt
     8461 attcaggcta atccgctggt gaaacaggaa ctggaaatta accagcagtt aagtcagcgt
     8521 ctgattaccg cgactgaaaa cggtaatcag ttgatgcagc aaaacattaa agtcaaaaac
     8581 tggctggagc gggcgctgca atcggaacgc aatattaaag agcagattgc cgtcctgaag
     8641 ggcagcctgc tgttgtctcg tatcctttac cagcaacaac aaacgctgcc ctcggcggat
     8701 gaactggaaa acatgaccaa ccgcatcgcg gatttgcgtc tcgaacagtt tgaagttaac
     8761 cagcagcgtg atgcactctt ccagagcgat gcgttcgtca acaaactgga agaaggtcac
     8821 accaacgaag tcaacagcga agttcacgat gcgttattgc aagtggttga tatgcgtcgc
     8881 gaattgctgg atcaactcaa caaacagttg ggtaaccagc tgatgatggc cattaacctg
     8941 caaatcaacc agcagcagtt aatgagcgta tcgaaaaacc tgaaatccat cctgactcag
     9001 caaatctttt gggtgaacag taaccgtcca atggactggg actggatcaa agcgttcccg
     9061 caaagcctga aagatgaatt taagtcgatg aaaatcacgg tgaactggga aaaagcctgg
     9121 cctgccgttt ttatcgcttt cctcgccggt ttgccgctgc tgttgattgt cgggctgatc
     9181 cactggcgtc tgggctggct gaaagcgtat caacaaaaac tggcttccgc tgtgggttcc
     9241 ctgcgtaacg atagccagct caacacacca aaagcgatcc ttatcgacct gatccgcgcg
     9301 ctgccggtgt gcctgattat tctcgcggtt ggcttgattc tgttgaccat gcagctcaac
     9361 atcagcgaac tgctatggtc gttcagcaaa aaactggcga ttttctggct ggtgtttggc
     9421 ctgtgctgga aggtactgga gaagaacggc gttgccgtgc gtcacttcgg catgccggaa
     9481 cagcagacca gccactggcg tcggcaaatt gtccgcatca gtctcgcatt gctgcctatc
     9541 catttctggt ctgtggtggc agaactttcc ccgctgcatc tgatggatga tgtgctgggg
     9601 caagcgatga ttttcttcaa cctgctgctg attgccttcc tggtatggcc aatgtgccgc
     9661 gaaagctggc gtgataaaga gtcgcacacc atgcgactgg tcaccattac cgtgctgtcg
     9721 attatcccga ttgcattgat ggtgctgact gccacgggtt atttctacac cacgctgcgc
     9781 ctctccgggc gttggattga aaccgtttat ctggtgatca tctggaactt gctctaccag
     9841 acggtattgc gcggcttaag cgtagcggcg cggcgtatcg cctggcgtcg tgcgctggcg
     9901 cgtcggcaga atctggtgaa agagggcgca gaaggtgccg aaccgccgga agaacccacc
     9961 attgcactgg aacaggttaa ccagcagacg ctgcgtatta ccatgttgct gatgtttgcg
    10021 ctgttcggtg tcatgttctg ggcaatttgg tccgatttga tcaccgtgtt cagctatatc
    10081 gacagcatta cgctctggca ttacaacggt actgaagctg gcgctgcggt ggtgaaaaac
    10141 gtcaccatgg gcagtctgtt gtttgcgatt atcgcctcaa tggtggcctg ggcgttgatt
    10201 cgcaacctgc ctggtttgct ggaagtgctg gtgctctcgc gactgaatat gcgccagggc
    10261 gcgtcgtatg ccattactac catccttaac tacatcatta ttgccgttgg tgcgatgacg
    10321 gtgttcggat cgctgggcgt ctcttgggat aaactccagt ggctggcggc agcattatcc
    10381 gtaggtcttg gttttggttt acaagaaatt ttcggtaact tcgtctccgg tttgatcatt
    10441 ctgttcgaac gtccggtgcg tattggcgat acggtaacca ttggtagctt ctcggggacg
    10501 gtaagtaaga tccgtattcg tgcgacaacg attaccgatt tcgatcgcaa agaagtgatc
    10561 atcccgaaca aagcgtttgt taccgagcgt ctgatcaact ggtcgttgac tgacactact
    10621 acgcgtctgg tgatccgtct cggcgtggcc tatggctccg atctggaaaa agtgcgtaaa
    10681 gtgttactga aggcggcgac tgagcaccca agggtgatgc acgaaccaat gccggaagtc
    10741 ttctttacgg cgtttggtgc cagcacgttg gatcatgagc tgcgtctgta tgtgcgtgaa
    10801 ctgcgtgacc gtagtcgtac tgtcgatgag ctgaaccgta ctatcgatca gctgtgccgt
    10861 gaaaacgaca tcaacattgc ctttaaccag cttgaagtgc atctgcacaa cgagaagggc
    10921 gatgaggtga cggaagtaaa acgcgactac aaaggcgatg acccgacgcc agcggtaggg
    10981 taataaccaa agggggcgac atttagttgc cccgagatta ctgacaaagt gcgcgttgtt
    11041 catgccggat gcggcgtgac cgccttatcc ggcctacgaa accgcaagaa ttcaatgtat
    11101 tgcaggagcg gtgtaggcct gataagcgta gcgcatcagg cagttttgcg tttgcccaca
    11161 atcttagggg acatttagcg gccccattta tttctcactt ttccgcctca tcatcgcgcg
    11221 ttaatttctt ttcataatcg cgttttacaa tatccagcgc gcgcagcacg gtgcgggctg
    11281 ggatctgatt ttcttccagc agcacaatca aatcgacagc cagtttgaca tcgtcagggg
    11341 cattttccag tgacatactc tctccattgc tagcgggtta agcgcgctag cctgttttcg
    11401 attttttcca gcgcatggcg gcagcgtgcc aggcgcgctt cataggcttc cacttcacga
    11461 tgcagcgttt gctgttccac gagatcggtc acccgcgcca ggcgggctct gcgttcggca
    11521 accatctcac gtagccgccg ctcaaaatcc tgatgctgaa tacgtttacg ctgccagcgg
    11581 gcaattttcg gtggcgcact gtcccactcg cgcaatgacc aggcggaggc ttcacgcgcg
    11641 atggcttcca gttgtgccgc cagatgttcc gccagccagg ccacttgcgg cagctgttgc
    11701 tgctcaactg catgacgaag cgcagccaga ttatcgccag cctcatcgag acaagcctgc
    11761 agtgttgtcg tacgggtttg aaaaaggtgt ctgtcaaaac gggcacttag cgtggcaaat
    11821 tgcgctaccg gggcacaacg ctgacgcagc gtagcgagct gtccttccag tttttccagc
    11881 agcagggcgg ttttcacgat aagacctcaa tgaaaatgat aattgttatg ctaaagtagc
    11941 cactctgtaa gctgacaaca ctcaatatgc aacgaatcat tttaatcatc attggctggc
    12001 tggcggtagt gctgggtacg ctgggcgtgg tattaccggt attaccgacg acgccgttta
    12061 tcctgctggc ggcctggtgc tttgcccgtt cttccccgcg ctttcacgcc tggttgctgt
    12121 accgctcatg gtttggcagc tatctacgtt tctggcagaa acatcatgcg atgccgcgcg
    12181 gcgtcaaacc gcgggcgatt ttgcttattt tgctcacgtt tgccatttct ctgtggttcg
    12241 tccagatgcc atgggtgcgc atcatgttgc tggtaattct cgcctgtttg cttttctata
    12301 tgtggcgaat tccggtgatt gatgaaaagc aagaaaagca ctgaagcaca acaatcgcag
    12361 ttgcaattat tgcgtacagc cagtacattc tggcgttttc gagcacaggc gcaggcggtc
    12421 aaaggttaaa caactgttac ttttgatacg tttaaaacgc gccgtgagta ccaccgtaac
    12481 aagcaggcat acacttatga ccgcgactgc acagcagctt gagtatctca aaaatagcat
    12541 caaaagcatt caggactacc caaaacccgg cattcttttc cgcgatgtca ccagcttact
    12601 ggaagacccg aaagcttacg ctctcagcat cgacttgctg gttgagcgtt acaaaaatgc
    12661 gggcattacc aaagttgtcg gcaccgaagc gcgtggcttc ttgtttggcg ctccggtagc
    12721 tctgggtctg ggcgttggct ttgtaccggt ccgtaaaccg ggcaaactgc cgcgtgaaac
    12781 catcagtgaa acttacgacc tggaatacgg caccgatcag ctggagatcc acgttgatgc
    12841 catcaaaccg ggcgacaaag ttctggtggt ggacgatctg ctggcaaccg gcggcactat
    12901 cgaagcgacc gttaaactga tccgtcgtct gggtggtgaa gtggctgacg ctgcgttcat
    12961 tatcaacctg ttcgatctcg gcggcgaaca gcgtctcgaa aaacagggca ttaccagcta
    13021 cagccttgtc ccgttcccgg gccattaatt atcgccagtc ttgtgctgcc cacgctacgg
    13081 acagcacaag atgtgcattc agcctcgccg ttctgacggg gctgtgttag cattacccct
    13141 tcgtgaatcc accttccagc gtttcagagc ctgccaatga gttatcaggt cttagcccga
    13201 aaatggcgcc cacaaacctt tgctgacgtc gtcggccagg aacatgtgct gaccgcactg
    13261 gcgaacggct tgtcgttagg gcgtattcat catgcttatc ttttttccgg tacccgtggc
    13321 gtcggaaaaa cctctatcgc ccgactgctg gcgaaggggc taaactgcga aaccggcatt
    13381 accgcgacgc cgtgcggcgt gtgcgataac tgtcgtgaaa tcgagcaggg gcgctttgtc
    13441 gatctgattg aaatcgacgc cgcctcgcgc accaaagttg aagatacccg cgacctgctg
    13501 gataacgtcc agtacgctcc ggcgcgtggt cgtttcaaag tttatctgat cgacgaagtg
    13561 catatgctgt cgcgccacag ctttaacgca ctgttaaaaa cccttgaaga gccgccggag
    13621 cacgttaagt ttctgctggc gacgaccgat ccacagaaat tgccggtgac gattttgtcg
    13681 cgctgtttgc aatttcatct caaggcgctg gatgtcgagc aaattcgcca tcaacttgag
    13741 cacatcctca acgaagaaca tatcgctcac gagccgcggg cgttgcaatt gctggcgcgc
    13801 gccgctgaag gcagcctgcg agatgcctta agtctgaccg accaggcgat tgccagcggt
    13861 gacggccagg tttcaaccca ggcagtcagt gcgatgctgg gtacgcttga tgacgatcag
    13921 gcgctgtcgc tggttgaagc gatggtcgag gccaacggcg agcgcgtaat ggcgctgatt
    13981 aatgaagccg ctgcccgtgg tatcgagtgg gaagcgttgc tggtggaaat gctcggcctg
    14041 ttgcatcgta ttgcgatggt acaactttcg cctgctgcac ttggcaacga catggccgcc
    14101 attgagctgc ggatgcgtga actggcgcgc accataccgc cgacggatat tcagctttac
    14161 tatcagacgc tgttgattgg tcgcaaagaa ttaccgtatg cgccggaccg ccgcatgggc
    14221 gttgagatga cgctgctgcg cgcgctggcg ttccatccac gtatgcctct gcctgagcca
    14281 gaagtgccgc gccagtcctt tgcacccgtc gcgccaacgg cagtaatgac gccaacccag
    14341 gtgccgccgc aaccgcaatc agcgccgcag caggcaccga ctgtaccgct cccggaaacc
    14401 accagccagg tgctggcggc gcgccagcag ttgcagcgcg tgcagggagc aaccaaagca
    14461 aaaaagagtg aaccggcagc cgctacccgc gcgcgtccgg tgccatcggc gctggaaaaa
    14521 gcgccagcca aaaaagaagc gtatcgctgg aaggcgacca ctccggtgat gcagcaaaaa
    14581 gaagtggtcg ccacgccgaa ggcgctgaaa aaagcgctgg aacatgaaaa aacgccggaa
    14641 ctggcggcga agctagcggc agaagccatt gagcgcgacc cgtgggcggc acgggtgagt
    14701 caactttcgc taccaaaact ggtcgaacag gtggccttaa atgcctggaa agaggagagc
    14761 gacaacgcag tatgtctgca tttgcgctcc tctcagcggc atttgaacaa ccgcggtgca
    14821 cagcaaaaac tggctgaagc gttgagcacg ttaaaaggtt caacggttga actgactatc
    14881 gttgaagatg ataatcccgc ggtgcgtacg ccgctggaat ggcgtcaggc gatatacgaa
    14941 gaaaaacttg cgcaggcgcg cgagtccatt attgcggata ataatattca gaccctgcgt
    15001 cggttcttcg atgcggagct ggatgaagaa agtatccgcc ccatttgatc gtaagcacag
    15061 cttacgttcg tcatccttaa cgtgattgag agagaaacct atgtttggta aaggcggtct
    15121 gggtaacctg atgaagcaag cccagcagat gcaagaaaaa atgcagaaaa tgcaggaaga
    15181 gatcgcgcag ctggaagtca ccggcgaatc tggcgcaggt ctggtaaaag tgaccatcaa
    15241 cggtgcacac aactgccgtc gcgtagagat cgacccgagc ctgctggaag acgacaaaga
    15301 gatgctggaa gacctggtgg ctgcagcatt caacgacgca gcacgtcgta ttgaagaaac
    15361 gcagaaagaa aaaatggcct ctgtatcctc cggaatgcag ctgccgcctg gctttaagat
    15421 gccgttctga tgcaaaccag cccgctgtta acacagctta tggaagcact gcgctgtctg
    15481 tcgggcgttg gcccgaagtc ggcgcagcgt atggcgttca cgctgcttca gcgcgatcgt
    15541 agcggcggga tgcgtctggc gcaggcgctc acccgggcga tgtcggaaat cggccactgc
    15601 gccgattgcc gcactttcac cgaacaggaa gtctgtaaca tctgttcgaa tccgcgtcgt
    15661 caggaaaacg gtcaaatctg tgtggtggag agtccggcgg acatctacgc cattgagcag
    15721 acggggcagt tttctggtcg ttattttgtg ttgatggggc atctgtcacc gctggacggc
    15781 atcggtccgg atgatatcgg gcttgatcgt ctggaacagc gtctggcaga ggaaaaaatc
    15841 actgaagtga tcctcgccac caatcccacg gttgaaggtg aagctaccgc taactacatt
    15901 gccgagcttt gcgcgcaata tgacgtggaa gctagccgaa tcgctcatgg cgtaccggtt
    15961 ggcggcgaac tggaaatggt cgatggcacc acgctgtcac actcccttgc cgggcgtcat
    16021 aagattcgtt tttaagcaaa cgagagcagg atcacctgct ctcgcttgaa attattctcc
    16081 cttgtcccca tctctccctc atcctgtttt taaccttaaa atggcattat tgaggtagac
    16141 ctacatgaaa ggacaagaaa ctcgtggttt tcagtcagaa gtgaaacagc ttctgcacct
    16201 gatgatccat tctctctatt ccaataaaga aatcttcctg cgtgagctta tctctaacgc
    16261 ctccgatgcg gcggacaagc tgcgtttccg tgcgctatct aacccggacc tgtacgaagg
    16321 tgatggcgaa ctgcgcgttc gtgtctcttt cgataaagac aagcgcacgc tgaccatctc
    16381 cgataacggc gtggggatga cccgcgacga agtgattgac catctgggga ctatcgctaa
    16441 atccggtacc aaatcattcc tcgaatccct gggttctgac caggcgaaag acagccagct
    16501 gatcggtcag tttggtgttg gtttctactc tgcgtttatc gtggccgaca aagtgactgt
    16561 gcgtactcgc gcggcaggcg aaaaaccaga aaacggcgtc ttctgggaat cggctggcga
    16621 aggtgaatat accgttgccg acatcaccaa agaagatcgt ggtactgaaa tcaccctgca
    16681 tctgcgtgaa ggcgaagacg agttcctcga tgactggcgc gtgcgttcca tcatcagcaa
    16741 atactccgac catatcgcgc tgccggtaga gatcgaaaaa cgcgaagaga aagacggcga
    16801 aaccgttatc tcctgggaga aaatcaacaa agcgcaggcg ctgtggactc gtaacaagtc
    16861 ggaaatcacc gatgaagagt acaaagagtt ctacaaacac atcgcccacg actttaatga
    16921 tccgctgacc tggagccaca accgcgttga aggtaagcag gagtacacca gcctgctgta
    16981 catcccgtcc caggctccgt gggatatgtg gaaccgtgat cataaacacg gcctgaaact
    17041 gtacgtccag cgtgtgttca tcatggacga cgcagaacag ttcatgccga actatctgcg
    17101 cttcgtgcgt ggtctgattg actccagcga tctgccgctg aacgtttccc gtgaaatcct
    17161 ccaggacagc acggtaacgc gtaacctgcg caatgcgctg accaagcgtg tgctgcaaat
    17221 gctggaaaaa ctggcgaaag acgacgcgga aaaataccag accttctggc aacagtttgg
    17281 cctggtactg aaagaaggtc cggcggaaga tttcgctaac caggaagcga tcgccaaact
    17341 gctgcgtttt gcttctaccc ataccgattc ttctgcgcag accgtatctc tggaagacta
    17401 cgtttcccgc atgaaagaag ggcaggagaa aatctactac atcaccgcag acagctatgc
    17461 ggcagcgaag agcagcccgc acctggaact gctgcgtaag aaaggcatcg aagttctgct
    17521 gctttccgac cgcatcgatg agtggatgat gaactatctg actgagttcg acggtaaacc
    17581 gttccagtcg gtgtctaaag ttgacgagtc gctggaaaaa ctggctgacg aagttgatga
    17641 gagcgcgaaa gaagcggaga aagcactgac tccgttcatc gaccgtgtga aagccttgct
    17701 cggcgagcgc gtgaaagatg tccgtctgac tcaccgtctg accgatacgc cagcgatcgt
    17761 ttcgaccgac gcggacgaaa tgagcactca gatggcgaaa ctgttcgctg cggcgggcca
    17821 gaaagtgcca gaagtgaaat acatcttcga actgaacccg gatcacgtac tggtgaaacg
    17881 tgcggcagat actgaagatg aagcgaagtt cagcgagtgg gtagaactgc tgctggatca
    17941 ggcgctgctg gcagaacgcg gcacgctgga agatccgaac ctgtttattc gtcgtatgaa
    18001 ccagctgctg gtttcctgat gtcatgccgg atgacctttg tgtcatccgg catttttctt
    18061 ttcatcatct gcactttccg caaattatct cgccattaac cgtttcagcc tcaggtgcct
    18121 ttcttgaggc aatcgcctgt tggtggtatc gtttatcgct ttttcaaaaa attcgacaca
    18181 ttttaagggg attttcgcaa tgcgtatcat tctgcttggc gctccgggcg cggggaaagg
    18241 gactcaggct cagttcatca tggagaaata tggtattccg caaatctcca ctggcgatat
    18301 gctgcgtgct gcggtcaaat ctggctccga gctgggtaaa caagcaaaag acattatgga
    18361 tgctggcaaa ctggtcaccg acgaactggt gatcgcgctg gttaaagagc gcattgctca
    18421 ggaagactgc cgtaatggtt tcctgttgga cggcttcccg cgtaccattc cgcaggcaga
    18481 cgcgatgaaa gaagcgggca tcaatgttga ttacgttctg gaattcgacg taccggacga
    18541 actgattgtt gatcgtatcg taggccgccg cgttcatgcg ccgtctggtc gtgtttatca
    18601 cgttaaattc aatccgccga aagtagaagg caaagacgac gttaccggtg aagaactgac
    18661 tacccgtaaa gacgatcagg aagaaaccgt acgtaaacgt ctggttgaat accatcagat
    18721 gactgcaccg ctgatcggct actactccaa agaagcggaa gcgggtaaca ccaaatacgc
    18781 gaaagttgac ggcaccaagc cggttgctga agttcgcgct gatctggaaa aaatcctcgg
    18841 ctaatcaagc cgcagcagat ctgctttcgg gcaggtctgc tcatccacct caggcaatac
    18901 ctctcacagc aattagttct tcttcctcac ttttccgcta caattatcaa caagttgaat
    18961 cgataagagg cggtaatgcg tcagactaaa accggtatcc tgctggcaaa cctgggtacg
    19021 cccgatgccc ccacacctga agcggtaaaa cgctatctga aacaattttt aagcgacaga
    19081 cgcgtggttg atacctcacg gttgttatgg tggccattgc tgcgcggcgt tattttgccg
    19141 ctgcgctcgc cgcgtgtggc gaagctgtat gcctctgtct ggatggaagg tggctcgccg
    19201 ctgatggttt acagccgcca gcaacagcag gcgctggcac aacgtttacc ggagacgccc
    19261 gtagcgctgg gaatgagcta cggctcgcca tcactggaaa gcgccgtcga tgaactcctg
    19321 gcagagcatg tagatcatat tgtggtgctg ccgctttatc cgcaattctc ctgttctacg
    19381 gtcggtgcgg tatgggatga actggcacgc attctggcgc gcaaacgtag cattccgggg
    19441 atatcgttta ttcgtgatta cgccgataac cacgattaca ttaatgcact ggcgaacagc
    19501 gtacgcgctt cttttgccaa acatggcgaa ccggatctgc tgctgctctc ttatcatggc
    19561 attccccagc gttatgcaga tgaaggcgat gattacccgc aacgttgccg cacaacgact
    19621 cgcgaactgg cttccgcact ggggatggca ccggaaaaag tgatgatgac ctttcagtcg
    19681 cgctttggcc gggaaccctg gctgatgcct tataccgacg aaacgctgaa aatgctcgga
    19741 gaaaaaggcg taggtcatat acaggtgatg tgcccgggct ttgctgcgga ttgtctggag
    19801 acgctggaag agattgccga gcaaaaccgt gaggtcttcc tcggtgccgg cgggaaaaaa
    19861 tatgaatata ttccagcgct taatgccacg ccagaatata tcgaaatgat ggctaatctt
    19921 gttgccgcgt atcgctaaag ctgagcggta aagaactgag cgccgtcgcg aagagcctcg
    19981 tcggcggttt tcatcattcg tgaataatgc aaaaaggcat gcagcgtacc tgggtagagt
    20041 ttgaactcac agggctgctg atgcgccgct aacgtctggt aaagcagacg gctgtcatcc
    20101 agcagcggat cgaactccgc cccggcaata aaacagggcg gaacttcgcg agtgagatca
    20161 ttattaaaca gacagtaata cggtgactcg tggtccgcgt cgttgcttaa atacgcctct
    20221 tcatacatct gcaaatcctg ttgcgttaag ccatcccaga caccgcccaa cagacgacga
    20281 gtcacggaat cccgtaatcc gtaaagccca taccacagca aaacacccgc aattttaccg
    20341 caatcgatct gtttatcacg caaccacaac gcactggcga gcgccagcat ggcacctgcg
    20401 gaatcaccgg caaagccaat gcgggacata ttgatttgat aatcctccgc ctgctggtgg
    20461 aaataacaac aagcagccac aatttcctct atcgcttgcg gaaaacgcgc ttcaggtgaa
    20521 agggggtaat caataccaat caccgtacat tggctgtagc ttgccagcag gcgcatgatg
    20581 cgatcgtggg tatcgagatt gccgagaata aaaccgcctc catgcaaata aaatagcgtc
    20641 gccgggctat ctggctgcgg acaaaagaga cgtgtttcca cctgcccata ttttgttgga
    20701 accatgtaag ctctggttgc catttctgga gcgcccgcat tccagaatcg gcgctcaagc
    20761 gtgtaatact gtcgttgctc agcaatcgtt cccgttgcgg gccaggacgg taaatccggc
    20821 tgaagagtat tcacaacggt cttcatttca gcagaaataa ggtccagaac aggtagtttg
    20881 ttttccggct tcatacaaaa actcctttca aattacgtca ttgtaaggaa ccactgccat
    20941 gaaaatgcga tcccgcctgc tgatattgaa actggctgcg tctcgcgcgc tcccgtcaga
    21001 ttgtgttaac attcgccgct cagttaacca cccgtaaaaa caaccatgaa atttcccggt
    21061 aaacgtaaat ccaaacatta cttccctgta aatgcacgcg atccgctgct tcagcaattc
    21121 cagccagaaa acgaaaccag cgccgcctgg gtcgtaggta ttgaccagac gctggtcgat
    21181 attgaagcga aagtggatga tgaattcatt gagcgttatg gattaagcgc cgggcattca
    21241 ctggtgattg aggatgacgt agccgaagcg ctttatcagg agctaaaaca gaaaaacctg
    21301 attacccatc agtttgcggg tggcaccatt ggtaacacca tgcacaacta ctcggtgctc
    21361 gcggacgacc gttcggtgct gctgggcgtc atgtgcagca atattgaaat tggcagttat
    21421 gcctatcgtt acctgtgtaa cacttccagc cgtaccgatc ttaactatct acaaggcgtg
    21481 gatggcccga ttggtcgttg ctttacgctg attggcgagt ccggggaacg tacctttgct
    21541 atcagtccag gccacatgaa ccagctgcgg gctgaaagca ttccggaaga tgtgattgcc
    21601 ggagcctcgg cactggttct cacctcttat ctggtgcgtt gcaaaccggg tgaacccatg
    21661 ccggaagcaa ccatgaaagc cattgagtac gcgaagaaat ataacgtacc ggtggtgctg
    21721 acgctgggca ccaagtttgt cattgccgag aatccgcagt ggtggcagca attcctcaaa
    21781 gatcacgtct ctatccttgc gatgaacgaa gatgaagccg aagcgttgac cggagaaagc
    21841 gatccgttgt tggcatctga caaggcgcta gactgggtag atctggtgct gtgcaccgcc
    21901 gggccaatcg gcttgtatat ggcgggcttt accgaagacg aagcgaaacg taaaacccag
    21961 catccgctgc tgccgggcgc tatagcggaa ttcaaccagt atgagtttag ccgcgccatg
    22021 cgccacaagg attgccagaa tccgctgcgt gtatattcgc acattgcgcc gtacatgggc
    22081 gggccggaaa aaatcatgaa cactaatgga gcgggggatg gcgcattggc agcgttgctg
    22141 catgacatta ccgccaacag ctaccatcgt agcaacgtac caaactccag caaacataaa
    22201 ttcacctggt taacttattc atcgttagcg caggtgtgta aatatgctaa ccgtgtgagc
    22261 tatcaggtac tgaaccagca ttcacctcgt ttaacgcgcg gcttgccgga gcgtgaagac
    22321 agcctggaag agtcttactg ggatcgttaa gttatcgtcg gttcgtaggc cagataaggc
    22381 gttcacgccg catctggcat ttggctctcg atgcctgatg cgacgctggc gcgtcttatc
    22441 atgcctacat atttttcata ttttacatcc ggcaaccacc gtttaccccg tcaccacctc
    22501 acccgccggt ggcgtttcca gcagttccag catggtacgg gcgatttcac gctcgcccat
    22561 cactacctga ttcgcaccac gttcggtgat atacgccact tcatcgtcat aatgggcgcg
    22621 ggcaataatc tcaatatccg gatttttcgc gcgggcagat gccacaatct cacccgcttc
    22681 ataaccgttg ggaatcgtca ggatcagcca ttttgcacat tccagatgcg ccagttgcat
    22741 aatttcttcg ttcgccgcat tgcccaatac tgcgcggacc ccgcgctctc gcagctcatc
    22801 aacacgggtt cgtgacgtct caatcaccac catcggaata tcagaggcga gcaatttctc
    22861 ccccagcagg ctgcctacac gaccgtaacc caccagtagc gcatggttgc aaatatccac
    22921 tgggatctgc ttctcttctt cgattgcctc ttccagcgtc tgctcttcca gcgtttcggt
    22981 cttcgccaga tatttctcca gtagtgcgaa cagtaccggg ttgagcataa tcgacaggat
    23041 cgcccctgcc agtaccaggt tttgtccggc ctgcggcagt aaattcaatg ccattcccag
    23101 tcccgccagg ataaacgcga actcaccaat ctgcgccagg ctggcggcga tggttaatgc
    23161 cgtacgttgg gagtgaccaa acagtcgcac caggaaaaat gcggctaacg acttaccaaa
    23221 cagaataatc gccagcgtcg ccagcactgc cagcggttgc tgaatcagaa ttaacggatc
    23281 aaacaacatc ccgacggaga caaaaaacag caccgcaaac gcgtcgcgca atggcagcgt
    23341 atcgtgggcg gcacggtgac tcagttcaga ctcgttcagt accatcccgg caaagaacgc
    23401 accgagtgca aaggagacat caaacagctc taccgcacca aaggcaatcc ctaacgccag
    23461 cgccagcacc gacagggtaa acagctcgcg agaaccggtt gccgcgctgc gtgccataat
    23521 ccacggcacc agacggcgac ctaccagcat cataatggcg ataaatgcga tcactttgcc
    23581 gatggtgatc cccatatcga ctgcaagagt ggcaaagccc acatcgccct gttccatcat
    23641 tcctgcaact gcgggcagca acaccagcgt cagaaccatt accaggtctt ccacaatcaa
    23701 ccaaccgatg gcgatttgcc cacgctgact gtcaattaat tgccgttctt caagtgcgcg
    23761 cagtaacacc acggtactgg cggtggaaag acataaaccg aacacgatac cggtcattaa
    23821 cgaccagccc agcacggcag agagcgccat acccagcagc gtcgccacgg ctatctgggc
    23881 gatcgcaccg ggaatggcga tggcctttac cgccatcaaa tccttcagcg aaaagtgcaa
    23941 accgacgcca aacatcaaca gaatgacgcc cagttcagcc agttccggcg caagcttggt
    24001 atcggcaaca aagcccggag tgaatggtcc tgccagcaca cccgctaaca gatatcccac
    24061 cagaggagaa atacgtagtt tattggccag catgccgagg ataaaggcga gcacaaggcc
    24121 gccaacaatg gtggtgataa gcggggtggc gtgatgcatt ccgtctcctt ttcctggtgg
    24181 ttattgtcca tttttggccg ggaaaaccaa aattacaggt aatagtttat gacaatttca
    24241 ttgatgatgt tcatgaataa ttattgaatt ttgcagaaaa atggaattag ctgcaaaaaa
    24301 agcacggatc ggaaaacaga aggcggttta acagaggaaa ggcttatggc gactgtaaaa
    24361 cgatgcagcc aaagtttgcc tttggctgca atgaaatcag tctttatgcc ggttatcagg
    24421 caggaatatg gtcaacatcc ccaatagtgg caggaaagca cagattttat agactaactc
    24481 gatgctggtg tgatcggcga taagccccag aactgccgct cccagacctc ccatgccaaa
    24541 agcaaaaccg aaaaagagtc cagaaaccat accgatacgt cccggaagta gctcctgagc
    24601 gtagaccaga atggcagaga atgccgaagc gaggataaat ccaataatca ccgttaaaac
    24661 ccccgtccag tgcaggctgg cgtagggtaa aatcagcgta aacggcgcaa cgccgaggat
    24721 agagccccaa atcacatatt tccgtccaat tttatcccct acaggcccgc cgatcaccgt
    24781 acctgccgca acggcaaaca ggaaggcaaa cagatgaagc tgggcattct ggatagataa
    24841 tccgaatttt tgcatcagat aaaaggtgta atag
//
LOCUS       DADMIB010000048        24632 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.048, whole genome shotgun sequence.
ACCESSION   DADMIB010000048 DADMIB010000000
VERSION     DADMIB010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24632
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.048"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..421
                     /gene="speG"
                     /locus_tag="JNZ89_001842"
     CDS             <1..421
                     /gene="speG"
                     /locus_tag="JNZ89_001842"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HAY8935750.1"
                     /translation="TTSHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIIS
                     PEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFTVEGELMHE
                     FFINGQYRNAIRMCIFQHQYLAEHKTPGQTLLKPTAQ"
     gene            complement(424..1134)
                     /locus_tag="JNZ89_001843"
     CDS             complement(424..1134)
                     /locus_tag="JNZ89_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416102.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfC family lipoprotein"
                     /protein_id="HAY8935751.1"
                     /translation="MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSNEFDFDPLRG
                     PVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAET
                     LEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKS
                     NDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEG
                     VKPAVERVYTIKNTIDYY"
     gene            1242..1547
                     /locus_tag="JNZ89_001844"
     CDS             1242..1547
                     /locus_tag="JNZ89_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1161 domain-containing protein"
                     /protein_id="HAY8935752.1"
                     /translation="MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPE
                     SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSANVSAPAQSTQDGAPAEPQ"
     gene            1746..2312
                     /locus_tag="JNZ89_001845"
                     /pseudo
     CDS             1746..2312
                     /locus_tag="JNZ89_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416104.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            2294..2422
                     /locus_tag="JNZ89_001846"
                     /pseudo
     CDS             2294..2422
                     /locus_tag="JNZ89_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310323.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
     gene            2465..3079
                     /gene="dmsD"
                     /locus_tag="JNZ89_001847"
     CDS             2465..3079
                     /gene="dmsD"
                     /locus_tag="JNZ89_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707489.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat proofreading chaperone DmsD"
                     /protein_id="HAY8935753.1"
                     /translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET
                     QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS
                     TLALRQWMREKGIQFEMKQYEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST
                     RFLDVFIEKAEHPFYRALGELSRLTLAQWQSQLLIPVAVKPLFR"
     gene            3238..4530
                     /gene="clcB"
                     /locus_tag="JNZ89_001848"
     CDS             3238..4530
                     /gene="clcB"
                     /locus_tag="JNZ89_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HAY8935754.1"
                     /translation="MHHLHIYPDLRTMFRRLLIATVVGILAAFAVAGFRHAMLLLEWL
                     FLNNDSGSLVNAATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQ
                     TDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWI
                     ACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDAL
                     LYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGG
                     LIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVF
                     TPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTEMATLLAATTHAPIMSTLMICEM
                     TGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS"
     gene            complement(4483..5178)
                     /gene="bioD"
                     /locus_tag="JNZ89_001849"
     CDS             complement(4483..5178)
                     /gene="bioD"
                     /locus_tag="JNZ89_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HAY8935755.1"
                     /translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGS
                     KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL
                     TDKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA
                     NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA
                     MLRSVLAVDRVTV"
     gene            complement(5303..6523)
                     /gene="mlc"
                     /locus_tag="JNZ89_001850"
                     /gene_synonym="dgsA"
     CDS             complement(5303..6523)
                     /gene="mlc"
                     /locus_tag="JNZ89_001850"
                     /gene_synonym="dgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor Mlc"
                     /protein_id="HAY8935756.1"
                     /translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
                     ASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR
                     DLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE
                     NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
                     VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNLGCLETIASVDSILE
                     LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN
                     PQKILIGSPLSKAADILFPIISDSIRQQALPTYSQHISVESTQFSNQGTMAGAALVKD
                     AMYNGSLLIRLLHG"
     gene            complement(6658..7551)
                     /locus_tag="JNZ89_001851"
     CDS             complement(6658..7551)
                     /locus_tag="JNZ89_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8935757.1"
                     /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ
                     IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS
                     APFIRAVSDTLSLFRRDYPGVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEH
                     AVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHL
                     TPVITQEVGEAMTIIGLVSAGLGVSILPASFKRAQLNEMRWVPIAEEDAVSEMWLVWP
                     KHHEQSPASRNFRIHLLNALR"
     gene            7658..8910
                     /locus_tag="JNZ89_001852"
                     /pseudo
     CDS             7658..8910
                     /locus_tag="JNZ89_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416113.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            9307..9621
                     /locus_tag="JNZ89_001853"
     CDS             9307..9621
                     /locus_tag="JNZ89_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416114.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid shock protein"
                     /protein_id="HAY8935758.1"
                     /translation="MKKQIEGMTMKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKT
                     THHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQP
                     AA"
     gene            9714..9797
                     /locus_tag="JNZ89_001854"
     CDS             9714..9797
                     /locus_tag="JNZ89_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935759.1"
                     /translation="MVGRYRFEFILIILILCALIAARFYLS"
     gene            9897..10718
                     /locus_tag="JNZ89_001855"
     CDS             9897..10718
                     /locus_tag="JNZ89_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HAY8935760.1"
                     /translation="MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDR
                     VPVNDTAQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVVLRF
                     VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP
                     LPLFEGDKAALTAALKSAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT
                     LPGDSGSPLMLHTNDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK"
     gene            complement(10757..11086)
                     /gene="mdtI"
                     /locus_tag="JNZ89_001856"
     CDS             complement(10757..11086)
                     /gene="mdtI"
                     /locus_tag="JNZ89_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtI"
                     /protein_id="HAY8935761.1"
                     /translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA
                     VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG
                     MIMVKLA"
     gene            complement(11073..11438)
                     /gene="mdtJ"
                     /locus_tag="JNZ89_001857"
     CDS             complement(11073..11438)
                     /gene="mdtJ"
                     /locus_tag="JNZ89_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtJ"
                     /protein_id="HAY8935762.1"
                     /translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS
                     YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI
                     KSGTRKARKPELEVNHGAV"
     gene            11850..12884
                     /gene="tqsA"
                     /locus_tag="JNZ89_001858"
     CDS             11850..12884
                     /gene="tqsA"
                     /locus_tag="JNZ89_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2 transporter TqsA"
                     /protein_id="HAY8935763.1"
                     /translation="MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIA
                     VILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIM
                     TPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMSSIFLLLLTVLF
                     MLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL
                     DVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFG
                     NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSI
                     AVLLSDLNKE"
     gene            complement(12909..14297)
                     /gene="pntB"
                     /locus_tag="JNZ89_001859"
     CDS             complement(12909..14297)
                     /gene="pntB"
                     /locus_tag="JNZ89_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HAY8935764.1"
                     /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
                     LIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR
                     HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV
                     SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
                     TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
                     ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
                     TVNPAAQDDPKSPIAGMPVLEVWKAQDVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD
                     AKASVDAILKAL"
     gene            complement(14308..15840)
                     /gene="pntA"
                     /locus_tag="JNZ89_001860"
     CDS             complement(14308..15840)
                     /gene="pntA"
                     /locus_tag="JNZ89_001860"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HAY8935765.1"
                     /translation="MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLAS
                     FDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM
                     QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
                     GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
                     EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK
                     TGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
                     LKLLCKEKDGNITVDFDDVVIRRVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTE
                     EKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALH
                     TPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFR
                     KN"
     gene            16364..17308
                     /locus_tag="JNZ89_001861"
     CDS             16364..17308
                     /locus_tag="JNZ89_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY8935766.1"
                     /translation="MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTG
                     RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNR
                     VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDA
                     NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA
                     SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE
                     VSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK"
     gene            17494..18876
                     /locus_tag="JNZ89_001862"
     CDS             17494..18876
                     /locus_tag="JNZ89_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8935767.1"
                     /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG
                     ITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
                     LVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT
                     LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLVLGVPVWEQVKNTMLITLWVFIGVEGAV
                     VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM
                     MGPWGEIIIAASLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL
                     WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG
                     ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA
                     SVPATWMLVG"
     gene            18913..19635
                     /gene="folM"
                     /locus_tag="JNZ89_001863"
     CDS             18913..19635
                     /gene="folM"
                     /locus_tag="JNZ89_001863"
                     /EC_number="1.5.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydromonapterin reductase"
                     /protein_id="HAY8935768.1"
                     /translation="MGKAQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI
                     DGLIKAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKLGAPLADVL
                     ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD
                     NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD
                     YLLTSCFVTGRSFPLDGGRHLR"
     gene            complement(19632..19944)
                     /locus_tag="JNZ89_001864"
                     /pseudo
     CDS             complement(19632..19944)
                     /locus_tag="JNZ89_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310340.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GlpM family protein"
     gene            20070..20789
                     /gene="rstA"
                     /locus_tag="JNZ89_001865"
     CDS             20070..20789
                     /gene="rstA"
                     /locus_tag="JNZ89_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416125.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RstA"
                     /protein_id="HAY8935769.1"
                     /translation="MNTIVFVEDDAEVGSLIAAYLAKHDMQVTVEPRGDQAEETILRE
                     NPDLVLLDIMLPGKDGITICRDLRAKWSGPIVLLTSLDSDMNHILALEMGACDYILKT
                     MPPAVLLARLRLHLRQNEQATLTKGLQETSLTPYKALHFGTLTIDPINRVVTLANTEI
                     SLSTADFELLWELATHAGQIMDRDALLKNLRGVSYDGLDRNVDVAISRLRKKLLDNAA
                     EPYRIKTVRNKGYLFAPHAWE"
     gene            20793..22094
                     /gene="rstB"
                     /locus_tag="JNZ89_001866"
     CDS             20793..22094
                     /gene="rstB"
                     /locus_tag="JNZ89_001866"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RstB"
                     /protein_id="HAY8935770.1"
                     /translation="MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMN
                     SSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVA
                     LDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPH
                     WQDMLKLEAAAQRFGDGHLYERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDG
                     IAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELH
                     LSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERVLDNLLNNALRY
                     CHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLA
                     IVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA"
     gene            22170..23099
                     /gene="tus"
                     /locus_tag="JNZ89_001867"
     CDS             22170..23099
                     /gene="tus"
                     /locus_tag="JNZ89_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HAY8935771.1"
                     /translation="MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEV
                     KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV
                     DNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRSLT
                     VLHDPATLRFGWANKHIIKNLHCDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD
                     IAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGE
                     LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD"
     gene            complement(23096..24499)
                     /gene="fumC"
                     /locus_tag="JNZ89_001868"
     CDS             complement(23096..24499)
                     /gene="fumC"
                     /locus_tag="JNZ89_001868"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HAY8935772.1"
                     /translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL
                     IHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS
                     NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
                     IPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS
                     LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ
                     AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT
                     MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIE
                     PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF
                     DSWVRPEQMVGSMKAGR"
BASE COUNT         5947 a         6342 c         6020 g         6323 t
ORIGIN      
        1 gaccacttca catattcacg atcagagcga acgacgcttt gtggtggaat gtgacggcga
       61 aaaagccggt ctggtggagc tggtggaaat taaccatgta catcgccggg cagaatttca
      121 gataattatc tccccggagt atcaggggaa aggtctggca acccgtgccg ccaaattagc
      181 aatggactat ggcttcaccg ttctcaatct ctataagctg tatctgatcg tcgataaaga
      241 gaatgaaaaa gcgattcaca tttaccgcaa gcttggcttt acggttgaag gtgaattgat
      301 gcatgagttt tttattaatg gtcaatatcg taatgccatt cgcatgtgta tattccagca
      361 tcagtatctg gcagagcaca aaacaccggg tcagactctc ctgaagccga ccgcacaata
      421 gcattaataa taatcgatcg tatttttgat ggtgtaaacc cgttcgacgg cgggttttac
      481 tccttcatca acaatgatca gctgacagtc caccggattg gcgtgactgt catattcaca
      541 gctctgtttt acattaccaa ctcgttgatt attcagtaaa gtaaccgctg tgtaatctaa
      601 ttttttgatc gggtccgttg atggcgtggc gctgacagat aatgttttgt cgttactttt
      661 cgtggtttta cccagtggat aaccctgatc atcatagcga tattccatct gcatttgttt
      721 gctgctggct ttaatcacga agccattatc atcggtttcc caactcaccc cggcagaagg
      781 taattctgct agctggcatt ttccctgtaa acgtactctc ttctccagcg tctcggcatc
      841 acggtaataa ttggcgtcca gtaccagagc gaccacggta ttattttcca gatccagtaa
      901 ttcgagtgaa tcaaaacagc cttcttccga caaagtccca gaaacacgtt tcgtcacttc
      961 accttgctca tccattaatg tctgagtgaa atcttttacc ggaccacgca gcggatcaaa
     1021 atcgaattca ttagagaaac tggccatctc aggggtaaat gaaagtgtta cctctgtgcg
     1081 gtcacatcct gtgaggaata tcgcgagtaa gcatggtagt aatttgtatt tcacaacagt
     1141 caccagagag tagagatgat tctcaatcat agtagcaaat acagtacttt acacgttaaa
     1201 tgctatgctt aaagaagtta tcttcgcgta aggagcttat gatgaaactc tcaacctgct
     1261 gtgccgcgct tctgctcgcc ctcgcctcac ccgcggtact cgccgcgccg ggatcctgtg
     1321 agcgcataca gagcgatata tcacagcgca ttatcaataa tggcgtaccc gaaagcagct
     1381 tcacattaag tattgtaccc aatgaccagg ttgatcagcc tgattcccag gtcgtcgggc
     1441 attgtgctaa tgatacgcat aaaattctct acacccgcac caccagcgct aacgtctctg
     1501 ctcccgcgca gtctacccag gatggcgcgc ctgccgaacc gcagtaatac attatcgact
     1561 gaacgccgga tatgacacat ccggcgattt gaacatacaa cataatccca ccttattact
     1621 catacccttc tattgatgtg gattaataat tcttaaccca aaatgggtag accccctcta
     1681 ttgttagcgc gctaaatatt caatacataa acatttatat aacgataaag aacagggagt
     1741 gagttatgtc caaaaatgac cgaatggtgg gcatcagccg cagaacactc gttaaatcaa
     1801 ccgcgatagg ttctctggcg ctggctgcag gcggtttttc tttaccgttc accctgcgca
     1861 gtgcagcggc aacggtacaa caggccagcg aaaaagtgat ctggggtgcc tgttccgtca
     1921 actgtggtag ccgctgtgca cttcgtctac atgttaaaga taatgaagtg acctgggtgg
     1981 aaactgacaa taccggcagc gatgagtacg gcaaccatca ggtacgcgcc tgtttgcgcg
     2041 gtcgctccat ccgccggcgt attaatcatc ccgatcgctt gaattaccca atgaaacgcg
     2101 tgggtaaacg cggtgaaggc aaattcgaac ggattagctg ggatgaagcc ctggatacta
     2161 tcgccagtag cctgaaaaaa accgtcgaac aatatggcaa tgaggctgta tatattcagt
     2221 actcttcggg gattgttggc ggcaatatga cccgctcttc gccatcagcc tcggcggtca
     2281 aacgcctgat gaactgctac ggcggttccc tcacgttgcc ggacttattc tggggctaat
     2341 cctcatactt ggcggtgaga tgatcgggcg tgtgctcttt tatggcctgc acatgacagt
     2401 aggaatggct attgcaggtt aacaaattgg tgcggggcaa cccgcacatt tcaggatgtt
     2461 aggaatgacc catttttcac agcaagataa tttttctgtc gcggcgcgcg tgttgggcgc
     2521 gctgttttat tacgctccag agagtgcgga agccgcacct ctggttgcgg tactcaccag
     2581 tgacggctgg gaaactcagt ggcctctacc agaagcgtca ttagcgccgc tggtgacggc
     2641 ttttcagaca cagtgtgaag agactcacgc ccaggcctgg cagcgtttgt ttgtcggccc
     2701 gtgggcactg ccgtctccgc cgtgggggtc ggtctggctg gatcgcgaat ctgtgctgtt
     2761 tggcgattca acattggcac ttcgtcagtg gatgcgcgag aaaggcattc agtttgaaat
     2821 gaagcaatac gaaccggaag atcattttgg ttcactgctg ttgatggctg cgtggttggc
     2881 ggagaatggt cgccagacag aatgcgaaga attgctggca tggcaccttt ttccgtggtc
     2941 aacacgtttt cttgatgttt ttatcgaaaa agcagaacac cctttctacc gtgcactggg
     3001 tgaactgtct cgcttaacgc tggcgcaatg gcaatcacaa ctgttaattc ctgtcgcggt
     3061 taaaccgctg tttcgatagg atcaccgtaa tattgccgga tggtgacgat tacgcgcaat
     3121 ccggcaataa taggttacag tgtcacgttt ttttatctct taaagcacgc actgcttttg
     3181 cggctggcct cttttgccgc aaaatagtcg cccgtgtttc attgcccatt tctgctcatg
     3241 catcatctac acatctatcc ggatctgcgc actatgttcc gccgtctgct tatcgcaaca
     3301 gtcgtcggta ttctcgcggc ctttgccgtt gccgggtttc gtcatgcgat gctgctactg
     3361 gagtggttgt tcctcaataa tgactccggc agtctggtca atgcagcgac aaacctttcc
     3421 ccctggcgac ggttgctaac tccggcgctc ggcggactgg cggcgggttt gttgctgatg
     3481 ggctggcaga aatttaccca acaacgccct catgcgccga ccgattacat ggaagcgttg
     3541 caaaccgatg gacagttcga ttacgcagca agcctggtta aatcgcttgc ctcgctgctg
     3601 gtagtaacca gcggcagtgc aattggtcgc gaaggtgcga tgattctttt agctgccctt
     3661 gccgcctcct gttttgccca acgttttacg ccacgccagg agtggaaatt atggatcgcc
     3721 tgtggcgccg cggcgggaat ggctgcggcc tatcgtgccc cgcttgctgg cagtttattt
     3781 atagccgaag tgctgtttgg cactatgatg ttggcctctc tcggcccggt gattatttcc
     3841 gccgtcgtgg cattgctggt tagcaatctg attaatcata gcgacgcgtt actctacaac
     3901 gtacaactct cagtgacggt tcaggctcgt gactatgcgc tgattatcag tacaggtgtg
     3961 ctggcaggtc tgtgcggacc actgttgtta acgttaatga acgcctgtca tcgtggattt
     4021 gtgagtctca aacttgcgcc gccctggcaa ctggcactag gcgggttgat cgtgggtctg
     4081 ctttccctgt tcacacctgc agtgtggggc aacggctata gcaccgtaca atccttttta
     4141 accgccccac cactgttaat gatcattgcc gggatcttcc tttgtaaact gtgtgccgtg
     4201 ctggcgagta gcggttccgg cgcacccggt ggtgtcttta caccgacgct atttatcggt
     4261 cttgccattg gcatgttgta tggtcgtagc ctgggattat ggttccctga tggcgaagaa
     4321 attacgcttt tactcggatt gaccgagatg gcgacactgt tggcggcaac cacgcacgcg
     4381 ccgattatgt cgacgttgat gatatgtgaa atgaccgggg agtatcagct actccccggt
     4441 ttattgattg cctgcgtcat tgcgtcggta atttcgcgga cgttacaccg tgactctatc
     4501 taccgccagc acactgcgca gcatagctaa gcggatgtat tgccccagtt ctcgctgttc
     4561 ggcgcgcggc agataaggca gttcaccaat gagcggtgcc ggaagttttt tacccagcac
     4621 atcaatgatt tccgcataat gcgccagtcc tgggttgatt cggttagcca cccagccaat
     4681 gagcggcagc ccgtcgttgg caatcgcctg agctgttagc agtgcatggt taatgcaacc
     4741 ttcctgaata ccgacaacca tcaacaccgg caactgttcc tgcaccaccc attcagagag
     4801 tggacgcaaa tcattcatca gactgcgcca gccgccagtc ccttctacca cgacatgatc
     4861 gactttatcg gtcaggtttg ccaggccgtt tgaaatgagg gtgtaattga ttgggcaact
     4921 gtgcgccacg ctactttctt cttcgcttaa cgcgatagga ttaactgctt cataaggtag
     4981 ttcgatggtt gaaacactct gcaacaccag ggcatcttta ttacgcagcc cttcgggtgt
     5041 ctctttgctc cccttcgcta cgggtttata tcccgcaact gtttttccct gggaggctaa
     5101 cgcttgtagc aatgcgcggg aaaccaccgt tttccctaca gaagtgtctg taccggtaat
     5161 aaagaaacgc ttcagcatca ctaactccac cgttatgctt cacaaatata aactaggaaa
     5221 ataattaacc ttgaaagtct aagttatgct ttcctggccc aaattgagat agcgcaaatt
     5281 ttggtagaac agttaaaaaa tgttaaccat gcaacagacg aatcaacaaa gaaccgttat
     5341 acatcgcgtc ttttaccagc gcagcgcctg ccatcgtgcc ctggttagaa aactgagtac
     5401 tctcaacgct aatgtgctga ctatacgtag gaagggcctg ctgacgtatg ctgtccgaga
     5461 tgatagggaa gaggatatct gccgctttac ttaacggtga gccaatcagt attttttgtg
     5521 ggttaaataa attcaccatg atggcaagaa tgcgcccgac atgcgcgccc accccggtaa
     5581 tgatgtcttt tgccagtaga tcgccgcgca atgccgcctg acacaatgag tccacggtta
     5641 acggttgccc atgtaacatc gagctcatgg attgattgag acgcagctgt gccagctcaa
     5701 gaatactgtc cacactggcg atggtttcga ggcagccgag gttcccgcaa taacagcgtt
     5761 taccatatgg gtcgacctgt gtgtggccta tttccacgag actactgctg cctgcgtgta
     5821 gcagatgacc atcggtaatg acgcccgccc ccacgttgtg atcgataacc acctgaatca
     5881 catcgcgcgc cccgcgtgag gcaccaaaca aggcctctgc catcgtccat gcgctgatat
     5941 catgctgaat ataaaccggt acgccggtat gctgctccag cgcctcgccg agcggcatct
     6001 cttttacatc ctcgtagaac ggcatgcgat gtacaatacc attttccgta tcaataattc
     6061 ccggcagggt tatggcaatc gaagttagac gctcaagttt tttctggtgg cggataaaaa
     6121 actgatcgat atgggaaatg atacgatcca gcaatggcaa gtcatctttt aacgccagtt
     6181 cctgcgactc ttccaccacc agtttgctgc tcagatcgcg cagagcaagg aaaatctcac
     6241 cgcgactaat gcgcagagaa agatagtgcc aggcttcagt ttcaaccacc agtcccaccg
     6301 ccggacggcc acggttcccc gcttctttga tttccagctc ttgcaccaag tgtgcttcga
     6361 gcatctcacg gacaatttta gtgatactgg caggagccag ctgcgccaga cgggaaagat
     6421 cgatacgcga gactggacca agctgatcaa tcaggcgata aaccgcgccc gcgttggtct
     6481 gctttatttg atcaatgtgc ccaggctggt tttcagcaac caccgcatac tccctatatt
     6541 ttcgcgctcc gaaataatct gtaggctatg gtgaagcact tcaatacgtg tcgtcaaatt
     6601 tttacttaga catgtgatta acagcacatt tttcgggctt tttcgctgaa atttccctca
     6661 cctgagagca ttcagcagat gaatacgaaa gttacgcgaa gctggacttt gttcatgatg
     6721 tttcggccag accaaccaca tttcagaaac cgcatcctct tcagcaatcg gcacccagcg
     6781 catttcgttg agctgagcac gtttaaatga agcaggcaaa attgaaacac ccagaccggc
     6841 ggaaaccaga ccgatgatgg tcattgcctc gcccacctcc tgagtgatga cgggcgtcaa
     6901 atggtaacgt cgcatcagcc cgagaatatc gtcatacagc cctgtcccga cgtgcggatc
     6961 aaaaaagacg aagggttctt tcgccagttc agccaacgtt acattcgggt tatttgccag
     7021 gggatgatcg tgcgggatca tcgccataag cggttcatgg acgatgactg cgtgttcaag
     7081 cgtctccggt aacgctgtgt tacgcagcaa tcccatatcc agcgttcctt caatgagcgg
     7141 agcgatttgc tcacgagtgt tcatttcgcg ggtttgtaaa tggacaccgg gataatcacg
     7201 gcgaaacagc gataacgtat cggacaccgc ccgaataaaa ggagcggacg aagtaaaacc
     7261 aatgcgcaac tcccccgctt caccctgatg cagtctttca gcgcgagcgg cagcgtcatc
     7321 taccatagac aggatttgcc gactatctgc aagaaactgt tttcctgctg ccgtcagcaa
     7381 tacactgcga ttagttcgtg ccagcagtcg ggcaccaatt tgttgctcca gtgcctgaat
     7441 ctgctgactt agcggtggtt gcgaaatatt caggcgggca gcggcgcgcc cgaaatgcag
     7501 ctcttccgca acagcaacaa agtaacgcag atgacgaagt tcaatattca tatttaaaac
     7561 atcttatttg agattattaa tatattagac agaacaattc gattttccta acctatgtat
     7621 aagcctgatc cacaggcata tttagcaagg atttcaagtg agccgtacta caactgttga
     7681 tggcgctccg gcaagcgaca ctgacaagca aagcatttct cagccaaatc aatttattaa
     7741 acgcggtacg ccgcaattta tgcgcgtcac cctggcgctg ttctctgccg gactggcaac
     7801 ctttgcactc ctctattgtg tgcagcctat ccttccggtg ctttcgcagg agtttggctt
     7861 aacccccgcg aacagtagta tttcactgtc catttccacg gcgatgttgg ctattggttt
     7921 gctgtttact ggccccctat ccgatgccat tggtcgcaaa ccagtgatgg tcacggcgct
     7981 actgttggcc tcaatttgta cgttatttcg acaatgatga ccagctggca cggcattttg
     8041 attatgcgcg ccttgattgg gctttcgtta agtggcgtgg cagctgttgg catgacttat
     8101 cttagcgagg aaatccaccc cagtttcgtg gccttttcga tggggttgta tatcagcggc
     8161 aactcaattg gcggcatgag cggacgctta attagtggtg tcttcacgga ctttttcaac
     8221 tggcgaattg ctctggcggc aatcggttgt ttcgcgctag cctcggcgtt gatgttctgg
     8281 aaaatccttc cggaatcacg ccattttcgc ccgacttcgc tgcgacctaa gacgttgttt
     8341 atcaactttc gtctgcactg gcgtgaccgg ggattaccgt tattgttcgc agaaggcttt
     8401 ttgctgatgg ggtcgttcgt cacgctgttt aattacatcg gctatcggtt gatgctttcc
     8461 ccctggcatg tcagtcaggc cgtggttggc ttattatcgc tggcttattt gaccggtaca
     8521 cggagctcac ccaaagccgg aaccatgacc acccgctacg ggcgcggtcc ggtgatgttg
     8581 ttttcgacgg gggttatgct gtttggttta ctgatgacct tattcagctc gctgtggctg
     8641 atctttgccg gaatgttact cttctcagca ggattcttcg cagcccactc agttgccagc
     8701 agctggatcg gcccccgcgc aaaacgcgct aaaggccagg cctcctcgct gtatctgttc
     8761 agttactatc tgggatcgag tattgccggg acgctgggtg atgttttctg gcataactat
     8821 ggctggaacg gcgtcggcgc atttattgct ctgatgctgg tcattgctct gctggtcggg
     8881 acgcgtttgc atcgtcgtct gcacgcctga aaaataagcc cggactgcgg taactacacg
     8941 tccggactta ttgcttgctc aaaccaacgt taatagccat cctaaaatag acgaagcgcc
     9001 agccaattcc cgcagtgcgt ctagcgtcat caggattata agtacccaaa taaacggatt
     9061 cattttgctg tgtgtcattt attactgatg cgcagttatt ctaccgcttt gtaagtagta
     9121 aaatagttaa cccgatcaag actactatta ttggtagcta aatttccctt aagtcacaat
     9181 acgttattat caatgctgta atttattcag cgtttgtaca tatcgttaca cgctgaaacc
     9241 aaccactcac ggaagtctgc cattcccagg gatatagtta tttcaacggc cccgcagtgg
     9301 ggttaaatga aaaaacaaat tgagggtatg acaatgaaaa aagtattagc tctggttgtt
     9361 gccgctgcta tgggtctgtc ttctgccgcc tttgctgcag agactgcgac gaccaccaaa
     9421 gcagcgccgg cgaaaacgac acatcataaa aaacagcata aagcagcacc tgcccagaaa
     9481 gcgcaggcag ctaaaaagca tcataaaaat acgaaagctg aacagaaagc ccctgaacaa
     9541 aaagcgcagg cagcgaagaa acacgccggg aaacacagtc atcagcaacc ggcaaaacct
     9601 gctgcacaac ccgcagcgta agttttcaac agtaatgctg gcgcgccccc tcgcgcctga
     9661 aaattacggt gctaagcggg taacgtttag caccgccttt agcggagggt agtatggtgg
     9721 gccgttatcg ctttgagttc attcttatca tccttatttt atgcgcactg attgccgccc
     9781 gtttttatct ttcctgactg tagttatctg attttactcc cactttcatc ccgtcccgtc
     9841 tatagtattt atgagggttt gcttttaata atcataatta cccaccagag tgtgatatgc
     9901 gtacaaccat tgctgtagtg ttgggtgcaa ttagtttgac gtctgctttt gtgtttgcag
     9961 ataaaccaga cgttgccaaa tcggcaaacg atgaggtcag caccctgttt tttggtcatg
    10021 atgatcgtgt gccagtgaat gacacggccc aatcaccgtg ggatgcggtt gggcaactgg
    10081 aaacggccag cggcaattta tgtacggcga cgctgattgc acccaatctg gcattaacgg
    10141 caggacactg tttattgaca cctccaaagg gtaaagccga taaagcagtg gtgctgcgtt
    10201 ttgtgtcaaa taaaggtctt tggcgctatg agatccacga catagaaggc cgcgttgatc
    10261 cgacactggg aaagcggtta aaagcagatg gggatggttg gattgtacct cccgcagccg
    10321 cgccgtggga cttcggattg attgtgctac gtaatccccc ttctggcatt acaccgttgc
    10381 cgttatttga gggagataaa gccgcgctta ctgccgcatt aaaatcggct ggccgtaaag
    10441 taactcaggc gggataccct gaagatcatc tcgatacgtt gtacagtcat caaaactgtg
    10501 aagtgactgg ctgggcgcaa acgtcggtga tgtcacatca gtgcgatacc ttgccgggtg
    10561 acagcggttc gcctctgatg ttgcatacca atgacggctg gcaattaatt ggggtgcaaa
    10621 gttcggctcc tgccgcgaaa gatcgctggc gcgccgataa ccgggccatt tctgttaccg
    10681 gttttcgcga caagctggat caactgtcgc aaaaataatg ttcaaacgct gcccgactgt
    10741 gcgggcagcg tgttcatcag gcaagtttca ccatgatcat tccagccaac agcaagacca
    10801 ggccaatcca gcctttacga tttaaccgtt gaccaaacaa gatccaacct gcggctaacg
    10861 tggcggcaat accaaacccg ccccacaatg cataagcgac agacaagtcg atccctttaa
    10921 cggcctgaga aagcgcacta aaggcagcca gcaccgccgc cagggagagc aagccaaata
    10981 ttttgcgacg aaagccgtca gaaaatttca aaaagacgtt agcaacgatt tccagcacga
    11041 ttgccaatgc cagccaggcg gcgtgaaccc attcaaactg cgccatggtt tacctccagt
    11101 tcaggtttac gcgctttacg ggtacctgat tttatcaaca caatcccggc gaccagggtg
    11161 gttaacccgg caattttcat cagcgataaa ctttcgtcga ataacaaaac gctaaacaag
    11221 gtaataaata aaataccgat accttcccac aacgcataag ctacgcctaa ggcgatcttt
    11281 ttaacggcga aagagagaaa tatatacgac agagaaatca tcaccagcat taaaataaag
    11341 ccgccatttc cctcactgac gctcgcccat ttcattgaca gcgtaccggt aatttctgta
    11401 gcaatagcca ggcctaataa aatccaataa atatacattg tccttctcct gcaagagaat
    11461 tattttaatt ttcgcttaat tcagcgaaat caaagtaaag tggtcaagcc ccgcgcatag
    11521 ggcaagctta ggcagaagaa aggactaaag cgcgttgcgc cagtgctgct cacctacgag
    11581 caagatagtg gatgaggtac aaagatgggt aaatgttgaa aataaggtcc tgaacaaatt
    11641 gtccataata ttacaattat ccgcagtgtt gcttctcgtc atcgcggatg ataattgtcc
    11701 tcggtagttg aacacgcctg atttgtatca tagcttaaga attaactcaa aatattttca
    11761 cttctttacc tgagcggttt gattttcgtt atgatgacgg agcgaaaaag acattattat
    11821 tagcaaagga agaaaaaacg gggacaagca tggcaaagcc gatcatcacg ctcaatggcc
    11881 taaaaatcgt cattatgttg ggaatgctgg tcattattct ctgcggtatc cgttttgccg
    11941 ccgagatcat cgtgccgttt attctcgcat tatttattgc tgttattctt aacccgctgg
    12001 tgcaacacat ggtccgctgg cgagtgccgc gtgtactggc ggtgtcgatt ttgatgacca
    12061 tcatcgtgat ggcgatggtg ttgctattag cttatctggg ttccgcgctc aacgagttga
    12121 cgcggacgtt accgcaatat cgcaactcta ttatgacgcc gctgcaagct cttgagccgt
    12181 tgttgcaacg cgtagggatt gacgtctcag ttgaccagct ggcgcattac attgatccga
    12241 acgcagcgat gacgttgctc accaacttat tgacgcagtt atctaatgcc atgtcatcaa
    12301 tatttttatt gctgctgacg gtgctgttta tgctgctcga agtgccacaa ttgcccggaa
    12361 aatttcagca aatgatggcg cgtccggttg aagggatggc ggcgattcaa cgtgcaattg
    12421 acagtgtttc tcattatctg gtgctgaaaa cagccatcag catcatcacc ggcctggtcg
    12481 cctgggcgat gctcgccgca ctcgatgttc gcttcgcttt tgtctgggga ttgctggcct
    12541 ttgcgcttaa ttacatccct aatattggtt cagttctcgc ggcaatcccc cctatcgctc
    12601 aggtactggt gtttaatggc ttctacgaag cgttgctggt gctggcggga tatctgctga
    12661 ttaatctggt cttcggcaat attctggagc cgcgcatcat gggacgtggg ctggggcttt
    12721 ccacattggt ggtatttttg tcgttgattt tttggggatg gttgttagga ccggtgggta
    12781 tgctgctttc cgtgccgtta acaattattg tcaaaattgc gcttgaacaa acagcgggag
    12841 gtcaaagcat cgccgttctg ttaagcgatc tcaataaaga gtgacggcct ccgcagaggc
    12901 cgtcagggtt acagagcttt caggattgca tccacgctgg ctttggcgtc accaaacagc
    12961 atgtgggtgt tttccttgaa gaacagcggg ttttgcacac cagcatagcc agtgttcatc
    13021 gaacgtttaa agacaatcac gtcctgcgct ttccacactt ccagcacagg cataccagca
    13081 ataggactct tcggatcatc ctgcgccgcc gggttaaccg tatcgttagc accaatcacc
    13141 agtacggtat cggtatcagc aaagtcatcg ttgatctcgt ccatttccag cacgatgtca
    13201 tacggtactt ttgcttcagc cagcaatacg ttcatatgtc caggcaaacg ccccgcaacc
    13261 gggtggatac cgaaacgcac gttgatacca cgagcgcgca gtttctcggt aatttcagcg
    13321 acaggatatt gcgcctgcgc gactgccatg ccgtaccccg gagtaatgat cactgaatgg
    13381 gagtttttca gcagttccgc tgtctcttct gcggtgattt cgcggtgctc gcccacttcc
    13441 tgatcatcgc cagtagaaga gccgtcggtg ccgaaaccac ccgcaataac gctgataaag
    13501 gaacggttca tcgccttaca cataatgtaa gaaaggatag cccccgaaga accgaccagc
    13561 gcaccggtca caatcagcag gtcgttgctg agcataaagc ccgcagccgc agccgcccag
    13621 ccggagtacg agttcagcat cgacaccacc actggcatat ctgcaccacc gatggaggcg
    13681 actaaatgcc agccgaatac cagcgcaatg gcggtcatta ttagcaatgc cagcacttgc
    13741 aggccgacgc tgtccgtgcg aacaaataca atcagcagca ggaaggaaac gaccagagcc
    13801 gccaggttca ttttgtgacg gtttggcagc atcaacggtt tagacgaaat cttgccacac
    13861 agtttgccga acgccaccac cgaacccgtg aacgttaccg ccccgatgaa gataccgagg
    13921 aacacttccg tcaggtgaat attgaccaga atcggtgcca ttcccgcgtc atgatgcaga
    13981 tagctgttaa agccaaccag cactgccgcc agacccacga agctgtgcag gatcgccacc
    14041 agttctggca tttcggtcat ttcaactttc ttcgccagac ggataccaat tgccccacca
    14101 atgaccatcg ccagcaagat ccagccaaca ttacccgtat ccggtccaaa aatggttgcg
    14161 attaacgcaa tcgccatccc tgcgataccg aagttgttac cctggcgaga cgtttcatgt
    14221 ttcgaaagac cggccagact gaagataaac aggatcgcgg caacaatgta tgcagctgta
    14281 actaatcctc cagacatatg ttacccctta atttttgcgg aacattttca gcatgcgctg
    14341 agtcacggtg aagccaccga aaatattaat gctggctata agcaccgcga taaaactaag
    14401 gaagctaacc cagccgccct ggccaatctg caacagtgct ccgacaacaa taatccctga
    14461 aatcgcgttg gtgaccgaca tcaacggtgt atgcagcgcg tgcgatacat tccacaccac
    14521 gtaataaccg acaacgcagg ccagcgcgaa aacggtgaag tgcccaagaa actctttcgg
    14581 cgcaacgctt gccagccaac cgaaaaggat gattgccagc gccatcaacg cgtatttacg
    14641 ccacggtgag caggcacatt tttcctcagt tttcacttcc ggtgccgctt tttgtgccgc
    14701 ctgcggctga gctgatacct gaatcggcgg tgccggccag gtaatttcgc ccgcacggat
    14761 cacggtcacg cggcgaatca ccacatcatc aaaatcaaca gtgatattgc cgtctttctc
    14821 tttgcacaac agtttcagca gattaacgag gttagtaccg taaagctgcg aggattgcgt
    14881 cggcagacgg cccggaagat cggtataacc aatcactttg acaccatttt ccgtagtgaa
    14941 gatttcaccc ggcacggtgt attcacagtt gccaccgttt tgggctgcca ggtcgacaat
    15001 cacactgccc gtcttcatgg agtcaaccat ttcacgggta attagcttcg gcgctggttt
    15061 gcctggaata agcgcggtgg tgacaatgat atcgacctct tttgcctggg cggcaaagag
    15121 ttccatttct gctttaatga acgcgtccga catcactttg gcatagccat cgccgctgcc
    15181 cgcttcctct ttaaaatcca gctcgaggaa ttccgcgccc atactttgaa cttgttcttt
    15241 cacttccgga cgggtgtcga atgcacgcac aatcgcgccg agactgtttg ctgcgccaat
    15301 ggcggccaga cctgcaacac ccgcaccaat caccatcact tttgccggtg gcactttccc
    15361 ggccgcagta atttgcccgg taaagaagcg cccaaattca tgtgccgctt caacaatggc
    15421 gcgataaccg gcgatgttcg ccatcgagct tagtgcgtcc agcgattgtg cgcgtgagat
    15481 acgcggcaca gaatccatcg ccatcacggt cacgttacgt tccgcaagtt tttgcattaa
    15541 ttccggattc tgcgcaggcc agataaaact caccagcgtt gtcccaggat tcagtaacgc
    15601 aatttcatca tctaacggcg cattgacctt cagaatgatc tctgactgcc agacgctatt
    15661 cccttctaca atttcagcgc ccgcttgcac aaacgcttta tcgtcaaaac ttgccagttg
    15721 acccgcgccg ctctctaccg cgacggtaaa acccagtttc agcagctgtt ccactgtttt
    15781 tggcgttgct gcaacacggg tttcattggt taaccgttct cttggtatgc caattcgcat
    15841 gatattccct tccatcggtt ttattgatga tggtttgcct gtgtcaggag ccacacaagc
    15901 cgctcatgta cgagctaaat gttactccgt taaaataaat tagtaacaaa cgccctataa
    15961 cgtactgaaa attatgcctg tgatctagcg ccaaaaatca gtatttcggc gtgaactcgc
    16021 aaaatattaa cgattcagcc gtgatagtgg gataaacacc ttagaacgcc ggataaagac
    16081 tgataattgt cttcgacggt cgggtaaaac gagacatcgc cccggcacga ttcactactt
    16141 aacattaaat taacttatac aattcagttg cttcagtagt aatgatgctg atacggctgt
    16201 tttttaagca tagacggtca tttgagcagg attaaaattg gcttaaggaa tgtgatatga
    16261 aaaatgacgc agacagttac accgtttaaa tgcaataatc agccacgttt ctcgttaata
    16321 acaataccag tacctggttt gcgcaaggcg aaggattatt tttatgaagc ttaagaacac
    16381 cctcctggcg tcggcactgc tttctgctac ggcattctcc gttaacgcag caacagaact
    16441 gacaccggag caagcggcag cggttaaacc ttttgaccgt gtagtggtta ccggtcgttt
    16501 taatgctatt ggcgaagcgg tgaaagccgt ttctcgtcgc gcagataaag aaggtgccgc
    16561 ctctttttat gttgtcgaca cttctgattt tggtaacagc ggtaactggc gtgtggtcgc
    16621 tgacctctat aaagccgatg ctgaaaaagc agaagaaaca agtaatcgcg taattaacgg
    16681 tgttgtcgaa ctgccgaaag atcaggctgt tctgattgaa ccgtttgaca cggtcaccgt
    16741 ccagggcttc tatcgtagcc agccagaagt caatgatgcc atcaccaaag cggcaaaagc
    16801 gaaaggtgcc tactctttct acatcgttcg tcaaatcgat gccaaccagg gcggcaacca
    16861 gcgtattact gcattcatct ataaaaaaga tgctaagaaa cgtatcgtcc agagcccgga
    16921 tgtgatcccg gcagattccg aagcaggacg tgcagctctg gctgccggtg gcgaagccgc
    16981 gaagaaagtt gagatcccag gtgttgcgac taccgcatca ccaagttctg aagtcggtcg
    17041 tttctttgaa acccagtcat caaaaggcgg gcgttacacc gtcacgctcc cggatggcac
    17101 taaagtcgaa gaactgaaca aagcgaccgc agcgatgatg gtcccgttcg atagcatcaa
    17161 attctctggc aactacggca acatgaccga agtctcctat caggttgcga aacgtgccgc
    17221 gaagaaaggt gctaagtatt accacatcac ccgccagtgg caggaacgtg gtaataacct
    17281 gaccgtcagc gcagatctgt ataaataact attcagttac tcctataagg cggcttgatg
    17341 ccgcctttcg catttttagt cacaaatttc cccgcgacca ttgcatgcag acacatctct
    17401 tcgtaaaatc ccgcgcttca gtggcaaact ccatttttat gcgttttgcc ctaatattta
    17461 ttcttcttat cacgttttaa tcactggata tcgatggaaa agaaactggg actgagcgca
    17521 ctcaccgcgc tggtattaag ctcaatgctg ggcgcgggtg ttttcagtct gccgcaaaat
    17581 atggcggcag ttgccagccc ggcagcactg ctcatcggct ggggtattac tggcgctggc
    17641 attttattgc tggcctttgc catgctgatc ctcacgcgca ttcgtcccga acttgacggc
    17701 ggtatcttta cctatgcccg cgaagggttt ggcgagctaa tcggcttttg ttccgcatgg
    17761 ggatactggc tgtgcgcagt catcgccaac gtctcctatc tggtgatcgt tttttccgcg
    17821 ttaagctttt ttacggacac gccggaattg cgcctgttcg gcgatggtaa tacctggcaa
    17881 tcgatcgtcg gtgcatcggc tttattgtgg attgttcact ttttgatcct gcgcggggtg
    17941 caaaccgctg ccagcattaa cctggtggcg acactggcaa aattgttgcc gctgggtctg
    18001 tttgttgtgc tggcgatgat gatgttcaaa ctggatacct tcaagctcga cttcaccgga
    18061 cttgtacttg gcgtacccgt ttgggaacag gtgaaaaaca ccatgctgat caccctgtgg
    18121 gttttcattg gtgtggaagg tgccgtggtt gtttctgcgc gtgcgcgtaa taaacgtgat
    18181 gttggcaaag cgacactgct ggcggttctc tccgctctgg gcgtttactt gctggtaacg
    18241 ctgctttcgc tgggtgtggt ggcacgtcct gaactggctg aaattcgtaa cccgtcaatg
    18301 gccggtctga tggtggaaat gatgggacca tggggcgaaa tcatcatcgc tgccagtttg
    18361 atcgtttccg tttgcggcgc gtacttaagc tggaccatca tggcggcaga agttccgttc
    18421 ctggctgcca ctcataaagc attcccacgc atttttgcgc gccagaacgc acaagctgcg
    18481 ccatccgcct cactgtggtt gaccaacatc tgcgtgcaaa tttgtctggt actcatctgg
    18541 ctgaccggtt ccgattacaa cacgttgctg accatcgcct cagaaatgat tctggtgccc
    18601 tatttcctgg tcggcgcgtt cttgctgaaa atcgcaaccc gtccactgca taaagcggta
    18661 ggtgtcggtg cctgcattta tggcttatgg ttattgtacg cctctggtcc aatgcacttg
    18721 ctgttatccg ttgttctgta tgcgccgggg ctgctggttt tcctgtatgc gcgcaaaacg
    18781 catacacatg ataatgtact gaaccgtcag gaaatggtgc tgattggcat gctgttaatt
    18841 gcctcagttc cggcgacctg gatgctggtg ggataacgtt catcccatcg ttggatagca
    18901 aaggagataa cgatgggtaa agcccagccc ttgccaatat taattactgg cggaggtcgt
    18961 cgcatcggcc tcgccctcgc ctggcatttc attaatcaaa agcaaccggt gattgtcagc
    19021 tatcggacgc actatccagc cattgatgga ctgattaagg caggtgcgca gtgtattcag
    19081 gctgattttt cgaccaacga cggtgtgatg gcgtttgccg atgaagtact aaaaagcacc
    19141 catggtctgc gtgctatttt gcataacgcc agtgcgtgga tggcggaaaa actgggtgcg
    19201 ccactggccg acgtactggc ttgcatgatg cagatccacg ttaatacccc atacctgctc
    19261 aaccatgcgc tggaaagatt actgcgtggg cacggacacg ccgccagcga tatcattcac
    19321 tttaccgatt atgtggtgga gcgcggtagc gacaagcata ttgcgtatgc tgcaagcaaa
    19381 gcggcactgg ataatatgac ccgctcgttt gcccgcaagc tggcaccgga agtgaaagtg
    19441 aattctattg ctccatcgct gatcctgttt aatgaacatg atgatgccga atatcgacaa
    19501 caggcgctga ataaatcact gatgaaaacc gcgcctggcg agaaagaagt gatcgacctg
    19561 gtcgattact tacttaccag ttgctttgtc accggacgca gtttcccact tgatggcggt
    19621 cgtcatctgc gttaatgcag ctttatccag catataatca acacccatgc aacacgcaac
    19681 agaaccaaca aaagcggcgg gcaagcgcat cattccggtg aaataccaca gcgacaccag
    19741 gtaaacaaaa tagggaataa tcgaccacat actaaaaatg atggttgcgc gtaaggcttc
    19801 aatgccgcgt tcgctggcaa caatataatg cgcgataagc gcaaaggtcg ggaaaagtgg
    19861 aatcagcccg gcgatataat aatttttcgt ttttgctaaa acaccaatca acagcactac
    19921 cagcgcaccg agcgcggctt tgattttacc ttaacacttc cataacaagt catcagtaga
    19981 atacctgatg aaaacttgtt tagaaacgat tgatagtaag taaaaacagc gcggtgtatt
    20041 gtgacgtttt tatatctacc gtgaatgtta tgaacactat cgtatttgtg gaagatgatg
    20101 cggaagtcgg ttcactgatt gccgcgtacc tggcaaaaca tgatatgcag gttaccgtag
    20161 agccgcgcgg cgaccaggcc gaagaaacca ttttgcgaga aaatccggat ttggtgttac
    20221 tcgacatcat gctaccaggc aaggacggca ttaccatttg tcgtgattta cgcgcaaagt
    20281 ggtctggacc gattgttctt ctaacctctc tcgatagcga tatgaaccac atcctggcac
    20341 tggaaatggg tgcctgcgac tatattctca aaacgatgcc ccctgctgtt ttgctagcgc
    20401 gtttacgttt gcatttgcgt cagaatgagc aagccacact gaccaaaggt cttcaggaaa
    20461 cgtctctgac tccctacaaa gccctgcatt tcggcacgtt gaccatcgat cccatcaacc
    20521 gcgtagtcac cctggctaac actgaaatct cgctctcgac agctgatttc gaattattgt
    20581 gggaattagc tacccatgcc gggcaaatca tggaccgcga tgcattgctg aaaaatttac
    20641 gcggcgtcag ttatgacgga ctggatcgta acgtggacgt ggctatttcg cggttaagaa
    20701 aaaaactgct cgataacgcc gcagaacctt atcgcattaa aactgtgcgt aacaaaggct
    20761 atctttttgc gcctcatgca tgggaataag cgatgaaaaa actgtttatc cagttttacc
    20821 tgttattgtt tgtctgcttc cttgtgatgt ctctgctggt tgggttggtg tacaaattta
    20881 ccgccgaacg cgcaggcaaa cagtcgctgg atgatttgat gaacagttcg ctgtatctga
    20941 tgcgcagcga attgcgtgag atccccccac acgactgggg taagacgctg aaagagatgg
    21001 atttaaatct ctctttcgat ctgcgtgtcg agccactgag taaataccat cttgatgata
    21061 tttccatgca ccgactgcgt ggcggcgaaa ttgtcgccct ggacgatcag tacacgtttt
    21121 tgcagcgtat cccgcgcagc cactacgtgc tggcagttgg tcctgttcct tatctttatt
    21181 atctccatca gatgcgattg ctggatatcg ccctgatcgc ttttattgct atttccctcg
    21241 cctttccggt gtttatctgg atgcgtccgc actggcagga tatgttaaaa ctggaagcag
    21301 cggcgcaacg atttggcgat gggcatctct atgagcgtat ccactttgat gagggttcga
    21361 gctttgaacg acttggtatc gcatttaacc agatggcgga caatatcaac gccttgattg
    21421 ccagcaaaaa acagcttatt gacggtatcg ctcacgaact gcgaacaccg ttagtgcgcc
    21481 tgcgttatcg actggagatg agcgataacc tgagcgccgc cgagtcccag gcgttgaatc
    21541 gtgatatcag tcaacttgaa gctttaattg aagagctgct gacttatgcc cgactcgatc
    21601 gcccacaaaa cgagcttcat cttagcgaac cagacctgcc gttgtggctg tcaacgcatc
    21661 tggcagatat tcaggcagta acgcccgata aaacggtacg gataaaaacg ctcgtgcaag
    21721 gccattatgc ggcgttggat atgcgcttaa tggagcgcgt gctggataat ttgctcaata
    21781 acgccctgcg gtactgccat tcaacggttg aaaccagcct gctactgtcg gggaatagag
    21841 cgacattaat tgttgaggat gatggcccag ggattgcccc agaaaaccgc gaacatatct
    21901 ttgaaccttt tgttcgcctc gatcccagcc gggatcgctc aaccggcggc tgcgggctgg
    21961 ggctggcaat tgtccactct atagcactgg caatgggcgg tacggttaat tgtgacacca
    22021 gcgaactggg tggtgctcgc ttctcgttta gctggccgtt atggcataac atcccgcaat
    22081 ttacctctgc ctgacactac gcgcacgatg gtcaagtcac caccattgtg ctataaatta
    22141 aggatgttgt aactaaagtg gttaatatta tggcgcgtta cgatctcgta gaccgactca
    22201 acactacctt tcgccagatg gaacaagagc tggctgcatt tgccgctcat cttgagcaac
    22261 acaagctatt ggttgcccgc gtgttctctt tgccggaggt aaaaaaagag gatgagcata
    22321 atccgcttaa tcgtattgag gtgaaacaac atctcggcaa cgacgcgcag tcgctggcgt
    22381 tgcgtcattt ccgccattta tttattcaac aacagtccga aaatcgcagc agcaaagccg
    22441 ctgtccgtct gcctggcgtg ttgtgttacc aggtcgataa cctttcgcaa gcagcgttgg
    22501 tcagtcatat tcagcacatc aataaactca agaccacgtt cgagcatatc gtcacggttg
    22561 agtcagaact ccccaccgcg gcacgttttg aatgggtgca tcgtcatttg ccggggctga
    22621 tcacccttaa tgcttaccgc tcgctcaccg ttctgcacga ccccgccact ttacgttttg
    22681 gctgggctaa taaacatatc attaaaaatt tgcattgtga tgaagtcctg gcacagctgg
    22741 aaaaaagcct gaaatcacca cgcagtgtcg caccgtggac gcgcgaggag tggcaaagaa
    22801 aactggagcg agagtatcag gatatcgctg ccctgccaca gaacgcgaag ttaaaaatca
    22861 aacgtccggt gaaggtgcag ccgattgccc gcgtctggta caaaggagat caaaaacaag
    22921 tgcaacacgc ctgccctaca ccgctgattg cactgattaa tcgggataat ggtgcgggcg
    22981 tgccggacgt tggtgagttg ttaaattacg atgccgacaa tgtgcagcac cgttataaac
    23041 ctcaggcgca gccgcttcgt ttgatcattc cacggctgca cctgtatgtt gcagattaac
    23101 gcccggcttt catactgccg accatctgtt ctggccgtac ccagctgtca aactcggctt
    23161 cgctaagata ccccagcgca agggccgcag cttttaaggt cagcccttct ttatgcgctt
    23221 ttttggcgat ctccgcggct ttgtcataac caatgtgggt gttaagcgca gtcaccagca
    23281 tcagcgattc attgagtaat tgattgattc gctcacgatt cggttcaata cccactgcgc
    23341 agtgtttgtt aaaactttcc atgccatctg ccagcaagcg caccgattgc aggaaattat
    23401 ggatcaccat cggacggaag acgttcagtt caaagttacc ggaagcgcca cccatgttga
    23461 tcgccacgtc gttccccatt acctgacagc agagcatggt taatgcttca cactgggttg
    23521 ggttcacttt ccccggcatg attgagctgc ccggctcatt ttccgggatt gagatttcac
    23581 caattccgca gcgcgggcca gaggccagcc agcggacatc attggcgatt ttcatcagtg
    23641 acgcagccaa ccctttcaac gcgccgtgcg cctgaaccag ggcatcacag gtcgcaagcg
    23701 cttcaaattt gttcggcgcg gtaacaaacg gtgcacaggt aatgactgcc agttcatctg
    23761 ctacgcgacg cgcatactcc ggatgggtat ttagtccagt acccaccgct gtaccgccaa
    23821 gagccagttc cgctacgtga ggcaggctgt attcgatatg tttgagatta tgctcgagca
    23881 tcgctaccca gccggaaatc tcctgcccta gtgttagcgg cgtggcgtcc tgcaagtggg
    23941 ttcgaccgat tttgacgata tcggcaaatg cacgcgattt ttcactcagt gtctgcgtca
    24001 gggttttaag ctgcggaatg agttgcttgc gcagcgccag cagcgccgca acgtgcatcg
    24061 ccgtcggaaa gacatcgttg gaactttggc ttttgttcac gtcgtcgtta gggtgaactt
    24121 tacgttccat cccgcgcacg ccgccgagta attcactggc ccggttagcc agcacttcgt
    24181 tcatgttcat gttactttgc gtgccggagc cggtctgcca gatagccagc gggaattcgt
    24241 cgtcatgctg tcctgccagt acttcatccg ccgcctgccg aatggcgctc gctttctctt
    24301 cagacaacaa gcctaaatct tcattaactt ttgccgctgc gcgcttggtt agcgccagcg
    24361 catgaatcag tgaggtgggc attttctccg tcgaaatgcg gaaatgctcc agcgagcgtt
    24421 gagtttgtgc gccccacagc ttatctgccg ggacatcaat cgcccccatc gaatcttttt
    24481 cgctgcgtac tgtattcatg gcctgctcct cacctgttta attttttctt tctgttttgc
    24541 tttcgctaag caacttttag ctcacttgtt atttactatt tgataacaag tgtttggtct
    24601 ttcgtgccat gtaaaaaaac cgccccgaag gg
//
LOCUS       DADMIB010000049        24552 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.049, whole genome shotgun sequence.
ACCESSION   DADMIB010000049 DADMIB010000000
VERSION     DADMIB010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24552
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.049"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..88
                     /locus_tag="JNZ89_001869"
     CDS             <1..88
                     /locus_tag="JNZ89_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF898 domain-containing protein"
                     /protein_id="HAY8935773.1"
                     /translation="PLINKEEQPDKGFLASISRGIMPSLPFL"
     gene            complement(144..2999)
                     /gene="valS"
                     /locus_tag="JNZ89_001870"
     CDS             complement(144..2999)
                     /gene="valS"
                     /locus_tag="JNZ89_001870"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HAY8935774.1"
                     /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNV
                     TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
                     HDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVSL
                     YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLV
                     VATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCV
                     KITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQK
                     LERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
                     AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRN
                     EEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
                     FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
                     DMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
                     GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFN
                     QTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLV
                     TVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTE
                     WLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVL
                     PADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEG
                     FVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL"
     gene            complement(2999..3442)
                     /gene="holC"
                     /locus_tag="JNZ89_001871"
     CDS             complement(2999..3442)
                     /gene="holC"
                     /locus_tag="JNZ89_001871"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004098129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HAY8935775.1"
                     /translation="MKNATFYLLDNDTTVDGLSTVEQLVCEIAAERWRSGKRVLIACE
                     DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTS
                     FADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK"
     gene            complement(3602..5113)
                     /gene="pepA"
                     /locus_tag="JNZ89_001872"
     CDS             complement(3602..5113)
                     /gene="pepA"
                     /locus_tag="JNZ89_001872"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HAY8935776.1"
                     /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
                     ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
                     TGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFN
                     VPTRRELTSGERAILHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNV
                     ITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDS
                     GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
                     GDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
                     TGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITA
                     GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE"
     gene            5380..6480
                     /gene="lptF"
                     /locus_tag="JNZ89_001873"
     CDS             5380..6480
                     /gene="lptF"
                     /locus_tag="JNZ89_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HAY8935777.1"
                     /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
                     ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
                     MILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
                     IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAL
                     LRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTV
                     FMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV
                     NLIYLALAIVLNLWDTVPVRRLRASFSRKGAV"
     gene            6480..7562
                     /gene="lptG"
                     /locus_tag="JNZ89_001874"
     CDS             6480..7562
                     /gene="lptG"
                     /locus_tag="JNZ89_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313266.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HAY8935778.1"
                     /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
                     GSYDALGAGMYTLLSVPKDVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
                     ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
                     VYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPK
                     QITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMW
                     SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
                     IPPIIGALLPSASFFLISLWLLMRKS"
     gene            complement(7723..9225)
                     /locus_tag="JNZ89_001875"
     CDS             complement(7723..9225)
                     /locus_tag="JNZ89_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HAY8935779.1"
                     /translation="MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLA
                     ESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFG
                     EKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQY
                     IGDNAKSFQNQYGNISSASVGAIQRGLLSLEKQGAAHFFGEPMLDIKDWMRTDTNGKG
                     VINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAP
                     QVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAV
                     KAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTE
                     DERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTKQQNNPPAKGKAVAVDDGILG
                     GLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR"
     gene            complement(9355..10374)
                     /gene="ahr"
                     /locus_tag="JNZ89_001876"
     CDS             complement(9355..10374)
                     /gene="ahr"
                     /locus_tag="JNZ89_001876"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent aldehyde reductase Ahr"
                     /protein_id="HAY8935780.1"
                     /translation="MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSD
                     LSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDAC
                     ISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
                     LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVN
                     SRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLI
                     AGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVV
                     LKADF"
     gene            10570..10654
                     /locus_tag="JNZ89_001877"
     tRNA            10570..10654
                     /locus_tag="JNZ89_001877"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10604..10606,aa:Leu,seq:caa)
     gene            10818..12083
                     /locus_tag="JNZ89_001878"
     CDS             10818..12083
                     /locus_tag="JNZ89_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY8935781.1"
                     /translation="MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRR
                     PSDKKEDRLAFGVWPTVTLAQARAKRDQAKKLLAQGIDPKAEQKEAQAENSGAYSFET
                     IAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKH
                     DVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARL
                     AAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYR
                     GMKMKEEHIVQLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGY
                     DTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNNVRAAYIHTSEHLDERRL
                     MVQWWADYLQANKGKTITPYDFAKINKSR"
     gene            complement(12138..13148)
                     /locus_tag="JNZ89_001879"
     CDS             complement(12138..13148)
                     /locus_tag="JNZ89_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935782.1"
                     /translation="MIYITSESKETLMIKYEGKMKKNIRVIPKNIHSKLRRLGNTVVA
                     GTSIAFTENQLKSGALEHLGIYFDNGVNAYETSVIPDPLQGKYSLKNVFGEEIVRKDL
                     PKETHYTEIESPNWGDSSNGTHTVRLPYEKYPRDIIPPTLIAIEINHKQPSDSHFIFN
                     FRVTRILDKQSNKFDDELLFDLNLLQENLGKCGIEDADKPISTYADTLIVSWEIFPPG
                     SKEETLARIFRGKNITSDKKNVAENRYDFFMSLEPKKIVTGNSTFSNYIGAMLEDDLV
                     VFENIEYGNAIYILYDNWDDISKLSRIDLLSGRAGSNFDRIIHSGNWKDEVRKKVAAG
                     RL"
     gene            complement(13099..13635)
                     /locus_tag="JNZ89_001880"
     CDS             complement(13099..13635)
                     /locus_tag="JNZ89_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935783.1"
                     /translation="MLKAIAGIAKYTWIYMAIFIISLMIISSSDINYVYNDFANYCTL
                     LVSVSGMVFTIMGIWLAFLYPNALQRIVNPKTIETVDFTEQLEDTRRLEAIVGSVLKS
                     SFVMITLLVVYLVKLVFFKSHLYLESQDVIKNTSLALIIAISYMQIEAVISVILANVM
                     FINDLHNKREQRDIDDQV"
     gene            complement(13636..14715)
                     /locus_tag="JNZ89_001881"
     CDS             complement(13636..14715)
                     /locus_tag="JNZ89_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935784.1"
                     /translation="MNVGHLNFFKVNKCGLYKVNDDNTYGLELSETFDLIQDWVGTKS
                     LALTIPWDPKEKPNSSKCYCKDIYKDENTGDFLVMLWKSDTDSTGSLLGASEDGEIGS
                     SSVVKYTNSYRGKKVIWGRPCFYWVIPELETIVSIKFDHSVCDSELFQDYVHSSITNR
                     VKHSKRVKNKTEKGYIRLSNTDDEDLYKYMYRFDMKLRSLETTHTELGKLIPKITHIV
                     RRETIIINPNDARADWLKTFSTLVPFVSGKKNAKTRQIEIKAEAKPSLNEVQEIIEKY
                     SAEDREKRLWDNVGFATDKGITWVDKYRMRDILNVPSDDYSTYSAAYIYEQISHKRKE
                     FISPILKELKALQSQPRIKKASGED"
     gene            complement(15113..15685)
                     /locus_tag="JNZ89_001882"
     CDS             complement(15113..15685)
                     /locus_tag="JNZ89_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Polarity suppression protein"
                     /protein_id="HAY8935785.1"
                     /translation="MESTALQQAFDTCQNNKAAWLQRKNELAAAEQEYLRLLSGEGRN
                     VSRLDELRNIIEVRKWQVNQAAGRYIRSHEAVQHISIRDRLNDFMQQHGTALAAALAP
                     ELMGYSELTAIARNCAIQRATDALREALLSWLAKGEKINYSAQDSDILTTIGFRPDAT
                     SVDDSREKFTPAQNMIFSRKSAQLASRQSV"
     gene            complement(15759..16259)
                     /locus_tag="JNZ89_001883"
     CDS             complement(15759..16259)
                     /locus_tag="JNZ89_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001405508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transactivation protein"
                     /protein_id="HAY8935786.1"
                     /translation="MIYCPSCGHVAHTRRAHFMDDGTKIMIAQCRNIYCSATFEASES
                     FFSDCKDSGMEYISGKQRYRDSLTSASGSMKRPKRMLVTGYCCRRCKGLALSRTSRRL
                     SQEVTERFYVCTDPGCGLVFKTLQTINRFIVRPVTPDELAESLHEKQELPPVRLKTQS
                     YSLRLE"
     gene            complement(16256..16990)
                     /locus_tag="JNZ89_001884"
     CDS             complement(16256..16990)
                     /locus_tag="JNZ89_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001600374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotein 3"
                     /protein_id="HAY8935787.1"
                     /translation="MSDNTIPEYLQPALAQLEKARAAHLENARLMDETVTAIERAEQE
                     KNALAQADGNDADDWRTAFRAAGGVLSDELKQRHIERVARRELVQEYDNLAVVLNFER
                     ERLKGACDSTATAYRKAHHHLLSLYAEHELEHALNETCEALVRAMHLSILVQENPLAN
                     TTGHQGYVAPEKAVMQQVKSSLEQKIKQMQISLTGEPVLRLTGLSAATLPHMDYEVAG
                     TPAQRKVWQDKIDQQGAELKARGLLS"
     gene            17542..17808
                     /locus_tag="JNZ89_001885"
     CDS             17542..17808
                     /locus_tag="JNZ89_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015979398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HAY8935788.1"
                     /translation="MQAVFSSPSPAPVTPLMPLPDITQERFLRLPEVMHLCGLSRSTI
                     YELIRKGEFPPQVSLGGKNVAWLHSEVTAWMAGRIAGRKRGYDA"
     gene            17805..18404
                     /locus_tag="JNZ89_001886"
     CDS             17805..18404
                     /locus_tag="JNZ89_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000980235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HAY8935789.1"
                     /translation="MMMPALQKLPFSGLPFSGICGYSFSAAAKSAAGRENPSNSQATY
                     DAPRVFFCVAINATERQIMVWCVVSRADGIPCILPASAHYAAESMVAQAGQPPGWPVS
                     CEAGILTPVWAIAIERENSGDSVICYSQEAAIMATTLTPSHPEFVFVFAAVRRADRHP
                     RICMLRTVAGDERSARRSLVRDYVLSLAARLPVVEVSRA"
     gene            18397..18684
                     /locus_tag="JNZ89_001887"
     CDS             18397..18684
                     /locus_tag="JNZ89_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001244665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Derepression protein"
                     /protein_id="HAY8935790.1"
                     /translation="MRNKKAPQTVSARHDAREHLSIEAYHKLNRASAVSQFVGGDLIH
                     RELSGLHQLYIPHIFSYLNEDIDFVLNELKAKGLCRDFLAQQKDRGDRTHV"
     gene            18677..19132
                     /locus_tag="JNZ89_001888"
     CDS             18677..19132
                     /locus_tag="JNZ89_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016569899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935791.1"
                     /translation="MFDFPQPGEIYRSAGFPDVAVVGILEDGIPWEMPYRCPDIVWNP
                     YRRKFSILVRILADGRTTDIPLGRFLREFTCDRPDLFKRSPVNRHAVLKEMAGDPELQ
                     KWREKYQDIYPQDTVPVSRAAPVAREWREIPRTEPDPEITPDNSYRNYL"
     gene            19268..19588
                     /locus_tag="JNZ89_001889"
     CDS             19268..19588
                     /locus_tag="JNZ89_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5375 domain-containing protein"
                     /protein_id="HAY8935792.1"
                     /translation="MKTPLPPVLRAALYRRAVACAWLTVCERQHRYPHLTLESLEAAI
                     AAELEGFYLRQHGEEKGRQIACALLEDLMESGPLKAAPSLSFLGLVVMDELCARHIKA
                     PVLH"
     gene            19603..21936
                     /locus_tag="JNZ89_001890"
     CDS             19603..21936
                     /locus_tag="JNZ89_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000783678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY8935793.1"
                     /translation="MKMNVTATVSHALGHWPRILPALGIQVLKNHHQPCPVCGGSDRF
                     RFDDREGRGTWYCNQCGAGDGLKLVEKVFGVSPSDVAAKVAAVTGSLPPADPAVTAAA
                     VAETDAARKNAAALAQTLMAKTRPGTGNAYLTRKGFPGRECRMLTGTHRAGGVSWRAG
                     DLVVPLYDDSGELVNLQLISADGRKRTLKGGQVRGTCHTLEGQNQAGKRLWIAEGYAT
                     ALTVHHLTGETVMVALSSVNLLSLASLARQKHPACQIVLAADRDLSGDGQKKAAAAAD
                     ACEGVVALPPVFGDWNDAFTQYGGEVTRKAIYDAIRPPAESPFDTMSEAEFSAMSTSE
                     KAMRIYEHYGEALAVDANGQLLSRYENGVWKVLPPLDFARDVAGLFQRLRAPFSSGKV
                     ASVVDTLKLIIPQQEAPSRRLIGFRNGVLDTQNGTFHPHSPSHWMRTLCDVDFTPPVE
                     GETLETHAPAFWRWLDRAAGGRAEKRDVILAALFMVLANRYDWQLFLEVTGPGGSGKS
                     IMAEIATLLAGEDNATSATIETLESPRERAALTGFSLIRLPDQEKWSGDGAGLKAITG
                     GDAVSVDPKYRDAYSTHIPAVILAVNNNPMRFTDRSGGVSRRRVIIHFPEQIAPQERD
                     PQLKDKITRELAVIVRHLMQKFSDPMLARSLLQSQQNSDEALNIKRDADPTFDFIGYL
                     ETLPQTSGMYMGNASIIPRNYRKYLYHAYLAYMEANGYRNVLSLKMFGLGLPVMLKEY
                     GLNYEKRHTKQGIQTNLTLKEESYGDWLPKCDDPATT"
     gene            22102..22296
                     /locus_tag="JNZ89_001891"
     CDS             22102..22296
                     /locus_tag="JNZ89_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001365036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY8935794.1"
                     /translation="MWIKDALVWIRATDPNLLIKNYLTFRFIDGLKIDWSEKQWGHKR
                     GHISLLCFIICFLSLTYFDI"
     gene            22514..23782
                     /locus_tag="JNZ89_001892"
     CDS             22514..23782
                     /locus_tag="JNZ89_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY8935795.1"
                     /translation="MALTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFRF
                     GGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHKRAVKEEQAKEIITFEKV
                     AREWLVTNQKWSEEHANRVKKSLEDNIFPAIGSHNIAELGTRDLLIPIKAVEKSGRLE
                     VASRLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASSNRQHRPALELKRIPELLQKID
                     EYTGRPLTRWATELTLLIFIRSSELRFARWSEIDFETSMWTIPPEREPIPGVKHSQRG
                     AKMRTPHLVPLSKQALAILKQIKQFCGEHELIFIGDHDPSKPMSENTVNSALRVMGYD
                     TKVEVCGHGFRTMACSSLIESGLWSKDAVERQMSHMERNSVRAAYIHKAEHLDERKLM
                     LQWWADFLDANREKGITPFDYAKINRGNGE"
     gene            24173..>24552
                     /locus_tag="JNZ89_001893"
     CDS             24173..>24552
                     /locus_tag="JNZ89_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001683504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935796.1"
                     /translation="MNFKKKLEEHFKQFEASPVLFVGSGVSRRYLGVPCWQDLLKHFA
                     EAIGENHIKLKTKSNGDLPEYAQLLVSAYAEKWWDTEEGQLALSEKEQEKTFINEQSP
                     LKLSISKYIENAHKNIIDNDELKH"
BASE COUNT         5831 a         6364 c         6099 g         6258 t
ORIGIN      
        1 tcctttaatc aataaagaag aacaaccaga taaaggcttc ttagccagta tttcacgggg
       61 aattatgcct tctttaccat ttctgtaaga gataaaaaag gccggagcat gctccggcct
      121 tcgttttcat cactgtgttt tgattacagc gcggcgataa cagcctgctg ttcaatcagc
      181 ttcgctttcg cttctgcata gccttccagc ttctcacgct ctttcgcgat gaccgcttcc
      241 ggtgcgcggg cgacaaagcc ttcattcgcc agcttgttct cgatacggct gatttcgcct
      301 tcgatcttcg ccacttcttt cgccagacgc gccagctcat cttctttgtt gatgaggcca
      361 gccatcggga tcagcagctc tgcgccgtcg atgatcttcg taacggaaac cggacctttg
      421 tcatcggcag gcagcacggt gatgctttcc agacgcgcca gggtttgcag gaagccacgg
      481 ttttcattta cgcgacgttc tgcatccgcg ctgcaaccac gcagcagcag ctccagcggt
      541 ttgcccggcg cgatgttcat ttctgcacgg atgttacgta ccgcaacgat cgcctgtttc
      601 agccactcgg tgtcagccag tgcggcttca tcaacctgag atgcatcgta ctgcgggaac
      661 ggctgcagca tgatggtgtc ggcagtgata ccgcaaagta ctttcacacg ctgccagatg
      721 gtttcggtga tgaacggaat gatcggatgc gcgaggcgca gcagaccttc cagtacagtc
      781 accagcgtat ggcgagtacc gcgcagttcg gcttcggttc caccgttcat taccggctta
      841 gtcagctcca gataccagtc gcagaactgg ttccaggtga actcatacag aatgcctgca
      901 gcgatatcga agcggaagct gtccagcgct tcgcggtacg ctttgatggt ctggttgaac
      961 tctgccagaa tccagcggtc cgccagcgac agcgtcattt caccaccgtt gaagccgcaa
     1021 tcctgacctt ccgtgttcat cagcacaaag cggctggcgt tccacagctt gttacagaag
     1081 ttacggtagc cttccaggcg tttcatatcc cagttgatgt cacgaccggt agaagccagc
     1141 gccgccaggg tgaagcgcag ggcatcggtg ccgtgcggct caatgccgtt cgggaactgt
     1201 ttctcggtgc gcttacggat tttgtccgcc agctgcggct gcatcatatt gccggtacgt
     1261 ttctccagca gttccggcag cgaaataccg tcaaccatat ccagcgggtc aataacgtta
     1321 cccttggatt tggacatctt ctggccttcg tcgtcacgaa tcaggccggt catgtaaacg
     1381 gtgtggaacg gcacctgcgg tttgccattt tcatctttga tgaagtgcat ggtcatcatg
     1441 atcatgcggg caatccagaa gaaaatgatg tcgaaaccag ataccatcac gctggttggg
     1501 tggaactggc gcagtgcgtc ggtgttttcc ggccagccta gggtagagaa ggtccacagc
     1561 gcagaagaga accaggtgtc gagaacgtct tcgtcctgac gcagggcaac gtcggcaccg
     1621 aggttatttt ccttgcgcac ttcttcttcg ttgcggccaa cataaacatt acctgcttcg
     1681 tcgtaccatg cagggatacg gtgaccccac cacagctgac gagagataca ccagtcctga
     1741 atatcgcgca tccaggagaa gtacatgttt tcgtactgct tcggtacgaa ctgaatgtcg
     1801 ccgttctcaa ccgcctcaac cgccggtttc gccagtacat cggcacgcac gtaccactgg
     1861 tcggtgagca tcggttcgat aactacgccg ccacggtcgc cgtaaggcac ggtcaggtcg
     1921 tgcggtttaa tttcttccag caggccgagc gcgtcaaccg cagcaacgac tgctttacgt
     1981 gcagcaaaac gctccagttt ctggaactct gccgggattt cgctggaata aacgtcagat
     2041 tcgttacctt tggtatcgaa cacctgggcg ctttcacgga tatcgccgtc aaaggtcagg
     2101 atgttgatca tcggcagcgc gtgacgttta cccacttcat agtcgttaaa gtcgtgcgcc
     2161 ggagtgattt tcacgcagcc ggtgcctttt tccatgtcgg cgtgttcgtc gccaacgatc
     2221 ggaatacgac ggttaaccag cggtagaatg acatatttgc caatcaggtc tttgtaacgc
     2281 ggatcttccg ggttaacggc cacgccggta tcgcccaaca gggtttccgg acgggtagtc
     2341 gcaaccacca gataatcttt accgtctgcg gttttcgcgc cgtcagccag cggatagcgg
     2401 atgtgccaca tcgaaccttt cgattcgcgg ttttccactt ccaggtcaga gatagcggtg
     2461 cgcagtttcg gatcccagtt taccaggcgt ttgccacggt aaatcaggtc ttctttatac
     2521 agactaacga aaacttcttt caccgcattg gacaggcctt cgtccatcgt gaagcgttca
     2581 cgctcccagt cgacggagtt gccgagacgg cgcatctgac gggtaatcgt gccgccggat
     2641 tccgctttcc attcccaaat tttgtcgatg aaagcttcgc ggccgtagtc gtgacgggtt
     2701 ttaccttctt ctgcggcaat cttgcgctca acgaccatct gggtagcgat cccggcgtgg
     2761 tcagtaccga cctgccacag ggtgtttttg ccctgcatgc gctgatagcg gatcatggta
     2821 tccatgatgg tttgctggaa ggcgtgaccc atatgcaaac tgccggtgac gttcggcggc
     2881 gggatcatga tgcagaaact ttcctggctt tcatcgccat taggcttaaa gtagccctgc
     2941 ttttcccagt gctcgtaaag cggctgttcg atatcttgtg ggttatatgt cttttccatt
     3001 atttccaggt tgccgtattc aggttgaaac cagccacgcg gtaggcttta tagcgttcgc
     3061 gcgccagttg tttcagagaa tcttcataag gaacgaagtc taccacttct gtgaaagcgg
     3121 tggcaaaatc tgcaaagctt gttcgcagac taatcaatat atcgcgcggg ctgctgctgc
     3181 gtttttgcgg ccaggcgatc tccaccggcg caccgccgcg cggtccttct cccgctaaat
     3241 tatgcggaac aaagctttct gccggacgcg cccacagggc ttcatccagc cggtaagcct
     3301 gcttttcatc ttcacaggcg atgagcacgc gcttaccgct gcgccaacgt tctgcggcaa
     3361 tttcacacac cagttgctca acggtgctta agccatcgac ggtggtgtca ttgtccagaa
     3421 ggtagaacgt cgcgtttttc atatatgggg cttcttgtgg tggatttaaa tacgcatcag
     3481 gtatacaccg cagcgcctga tgcgacgctg ttgtgtctta tcaggcctac gagttcagtg
     3541 ctgtgtaggt cggataaggc gttcacgccg catccggcaa taacagcctt gcctgacgca
     3601 attactcttc gccgttaaac ccagcgcggt ttaacaggaa ctgtgccagc aacgccaccg
     3661 gacgaccggt ggcgcctttt gctttaccag aacgccaggc ggttccggcg atatccaggt
     3721 gcgcccagtt gtacttacgg gtaaagcgcg acaggaagca acctgcggta atcgccccac
     3781 caggacgacc gccaatgttc gccatatcgg caaaattgga ctccagctgt tcctgatact
     3841 cgtcacccag cggtaagcgc catgcgcggt caccggattg ttcagacgcg gcaatcagtt
     3901 catgggccag cggattatgg ttcgccatca gaccggtaat gtgatgaccc agcgcgatca
     3961 cgcaggcacc ggtcagcgtc gccacgtcaa tcaccgcttc cggctcaaaa cgctcaacgt
     4021 aagttaacac gtcgcacagt accaggcggc cttcagcgtc ggtattcagc acttcaacag
     4081 tttgaccgga catggtggtt aacacatcgc ccggacgata ggctcgtccg ccaggcatgt
     4141 tttcgcagcc tgccaacacg ccgataacgt taatcggcag ttgtagctcc gcgaccatcc
     4201 gcatcacgcc gtaaaccgct gccgcaccgc acatatcgta cttcatctca tccatgcctt
     4261 ctgaaggctt gatcgagata ccgccggagt cgaaggttaa acctttaccc accagcacga
     4321 ttgggcgtgc atcttccgac gcgttgcctt tgtactcaat caccgacatc agcgattcgt
     4381 tttgcgaacc ctgaccgacc gccagatagg aatgcatccc cagctctttc atctgctgtt
     4441 cgccgataac gcgggtgatg acattcttgc tgtagctgtc agccagctgg cgcgcttgtg
     4501 aagcgaggta agcggcgtta cagatattcg gcggcatatt gccgagatct tttgctgctt
     4561 taatcccggc ggcaatcgcc agaccgtgca ggatcgcgcg ctcaccgctg gtcagttcac
     4621 ggcgggtcgg cacgttgaac accattttac gcagcggacg acgcggttcg ctcttgttcg
     4681 ttttcagctg atcgaaactg tagagcgtct cttttgccgt ctcgacagcc tgacgcactt
     4741 tccagtagtt gttacggcct ttaacgtgca gttcagtcag aaagcagacc gcttccattg
     4801 agccagtatc attcagcgta ttaatggttt tctgaataac ctgcttgtac tgacgctcat
     4861 ccagctcacg ttctttgccg caaccaataa ggagaattcg ctcggaaagt acattcggaa
     4921 catggtgcag caacaatgtc tgccccggtt ttccttccag ttcgccccga cgtagcaggg
     4981 cgctgatgta cccatcgctg attttatcga gctgttctgc aatcggagaa aggcgacgtg
     5041 gttcgaagac gcccacgacg atgcaggcac tccgctgttt ctccgggcta ccgcttttta
     5101 cactaaactc catgcactac gctcctgaat cttaaagaca acggcggtgg ctacagatag
     5161 aattgcaagc tttcgtaact catgtccgct gttgcgatga cttcgtgtta atcttaacgt
     5221 tattacggca ttggcacgtc agaacaaaat ctgagaggtg aatccgttga gtataattat
     5281 cttagcgacg atttcgacga ctcaagagaa taaatgacgt ttaagccatg aaacaagcta
     5341 aaatcctgca aaagacgagt ttttacgggc gtatttaaag tgataatcat aagatatctg
     5401 gtgcgggaga cgctcaaaag ccagctggcg atactcttca tcttgctttt gatcttcttc
     5461 tgtcaaaagt tagtgaggat cctcggcgca gcggttgacg gcgatattcc ggcgaatctg
     5521 gtgctctccc ttctcgggtt gggcgtgccg gaaatggcgc agcttatcct gccattaagc
     5581 ctgttcctcg ggctgctgat gacgctgggc aaactgtata ccgaaagtga aattacggta
     5641 atgcatgcct gcggcctgag caaagcggtt ctggtgaaag cggcaatgat ccttgcggta
     5701 ttcactgcaa tcgtcgcggc ggttaacgtg atgtgggcgg gaccgtggtc atcgcgtcat
     5761 caggatgaag tgttagcaga agcgaaagcg aaccctggca tggcggcgct ggcgcaaggg
     5821 caattccagc aagcgactaa tggcagctcg gtgctgttca tcgaaagcgt tgacggcagc
     5881 gatttcaaag atgtgttcct cgcgcaaatt cgaccaaaag gtaatgcacg tccttctgtg
     5941 gtggtggccg attccggaca tttaacccag ctgcgcgacg gctcccaggt cgtcactctc
     6001 aaccagggaa cgcgcttcga aggcactgca ctgttacgtg atttccgcat tacggacttc
     6061 caggattatc aggcgatcat tggtcaccag gcggtagcgc tcgacccgaa cgataccgac
     6121 cagatggaca tgcgtacatt gtggaacact gacaccgatc gtgcccgcgc agaactgaac
     6181 tggcgtatca cgttggtatt caccgtgttt atgatggcac ttatggtcgt accgctgagc
     6241 gtggttaacc cgcgtcaggg acgcgtacta tcgatgctgc cagccatgct gctgtatcta
     6301 cttttcttcc tgatccagac ctccctgaaa tcgaacggcg gtaaaggtaa gctggacccg
     6361 acgctgtgga tgtggaccgt taacctgatt tatctggctt tggcgattgt tctcaacctt
     6421 tgggacaccg tgccggtccg ccgcctgcgc gccagttttt cgcgtaaagg agcggtgtga
     6481 tgcaaccttt tggcgtactt gaccgctata tcggtaaaac tattttcacc accatcatga
     6541 tgacgctgtt catgctggtg tcgctgtcgg gcattatcaa atttgtcgat cagctgaaaa
     6601 aagccgggca ggggagttac gacgcgttag gcgcaggaat gtataccttg ctgagcgtgc
     6661 cgaaagatgt gcaaacattc ttcccgatgg cggctctgct tggggcgttg cttggtcttg
     6721 ggatgctggc gcagcgcagc gaactggtgg tgatgcaggc ttctggtttc acccgtatgc
     6781 aggttgcgct gtcggtgatg aaaaccgcca ttccgctggt cttgctgacg atggcgattg
     6841 gtgaatgggt cgcgccgcag ggcgagcaga tggcgcgtaa ctaccgtgcg caggcgatgt
     6901 acggcggctc gttgctctct acccagcaag gcttatgggc gaaagatggc aacaacttcg
     6961 tttacattga gcgggttaaa ggtgacgaag agttaggtgg catcagtatt tatgccttta
     7021 acgagaatcg tcgtctgcaa tccgtacgct atgccgctac tgcgaagttt gacccggaac
     7081 ataaagtctg gcgtctgtcg caggttgatg aatctgatct gaccaatccg aaacagatca
     7141 ccggttcgca gacggtgagc ggcacctgga aaaccaacct cacgccggac aaactgggcg
     7201 tggtggcgct ggacccggat gcactctcaa tcagcggttt gcacaactac gtgaagtatc
     7261 tgaagtcgag cggtcaggat gccggacgtt atcagctcaa tatgtggagc aaaatcttcc
     7321 agccgctatc cgtggcggtg atgatgctga tggcgctgtc gttcatcttt ggcccactgc
     7381 gtagcgtacc gatgggcgtg cgtgtggtca ccggtatcag cttcggtttt gtcttctacg
     7441 tactggacca gatcttcggc ccgctgacgt tggtttatgg catcccgccg atcatcggcg
     7501 cactgttgcc aagcgccagc ttcttcttaa tcagcctgtg gctgttaatg agaaaatcgt
     7561 aaccgaatga acgaataaag ggagcgaaag ctccctttat tattgttagc aaagtgtgct
     7621 tcgttcatgc ctgaaaaatc atgaaaatcc aatatattgc agtggtgtag gcatgataag
     7681 acgcgccagc gtcgcatcag gcaaagacaa atctcgcctg acttaccttc ttcttccccc
     7741 cagcaaactc cccaacatcc cacgtacaat ctgattcgtc acctggcggg cggcgctttt
     7801 cgccattgtt tgcaccacac catctttctt cccgccgcgt ggtccggtag tgccaaacaa
     7861 aatatccttc aatccaccaa gaataccgtc atccaccgcc accgctttcc ctttcgcggg
     7921 aggattattt tgctgcttgg tactggcctg aaagcctttt tgcaacatct cataggcgga
     7981 ttcccggtcc acgtcatcct cgtacttgcc atacaccggg gagtggttaa tcaagccatt
     8041 gcgctcatct tccgtcaccg gtcccatccg cgaacaaggc gcaatcacca tcgcccgttc
     8101 caccacagaa ggacttcctt ttgcatcgag aaacgagatt aacgcctcgc cggtccccag
     8161 ttcctggatt gccttttcgg tatcaaacgc cggattggcc cgcatggttt gcgccgcagc
     8221 ttttaccgct ttctgatctt tgggcgtaaa agcccgcaaa gcgtgttgaa cgcgattacc
     8281 gagctgcccg agcacattat ccggaatatc agacgggttt tgcgaaacga accagacgcc
     8341 cacgcctttt gagcgaataa gccttattac ctgctcaatc ttatccagca gtacctgcgg
     8401 tgcatcgtta aacagcagat gtgcctcgtc gaagaaaaac accagttttg gtttctccag
     8461 atcgcccgct tccggcaatt gttcatacaa ctctgaaagc atccacagca ggctggcggc
     8521 gtacagtttc ggcatctgat aaagcttctc ggcgctgagg atattgataa cgcctttacc
     8581 gttggtatcg gtgcgcatcc agtctttgat atccagcatc ggctcgccaa agaaatgcgc
     8641 cgcaccttgc ttttccagcg acagtaaacc gcgctggatg gcaccaaccg atgcgctact
     8701 gatattaccg tactgattct ggaaagattt ggcgttatcg ccgatgtact gggtaatcgc
     8761 ccgcagatct ttaaagtcga gcagcaacaa tccctgatcg tcagcaatac ggaagatgat
     8821 attcagcacg ccagattgca catcgttgag attcaacagc cgcgccagca acagcggccc
     8881 caggtctgaa accgtcgccc gcaccggatg gcctttctcg ccaaagatat cccacaccac
     8941 caccggatta gcatgcggtt gccagtcatt gacgccgata tttttaagcc ttgtgagcag
     9001 tttttccgac gccgttcctg cctgcgcgat accggtcaga tcgcctttca catcagccat
     9061 aaacaccggc acgccgattt ccgacaatga ctctgccagt ttttgcagcg taacggtttt
     9121 acccgtcccc gttgcgccag taatcagccc gtgacggtta gccattcccg gcagtaaaaa
     9181 aagttctgtg tccggcgtgc gggcaattaa taggggttcg ctcatgagat ttcctccagt
     9241 ttcctgcctg gagtataggc aacggctgcg cactcttcac cgctaaattc agcagattgc
     9301 gagacgcctt ccaaagagat ttaagtgccg ggcgacaggc acccggcaaa gggatcagaa
     9361 gtcggctttc agaaccacgc ggtaacgcgc cttaccgtcg cgcacatgct tgatggcatc
     9421 gttaattttc gacatcggga acagttcggt ggtcggcgca accttgctac gggcggcaaa
     9481 gcgcatcagc tttcgcagct cataaggcgt gccggtagca gaaccagaga tgctgcggtc
     9541 gcccgcaatt aatgtaaagg ccggaacaga cagcggcgtg agaaccgcac cgaccgtatg
     9601 gaaattaccg ccataggtca gcgcctcaaa ataaggctgc cagtcgaggc tgacgttcac
     9661 agtattgata atgagatcaa actgccccga cagggctttc agtgcctgcg gatcgcggct
     9721 attcaccact ttatcggcac ccatcgccag tacttcctgc tctttcgccg gattagaact
     9781 aaaggccgtc acctcgcatc ccattgcgtg cagaagtttt atagcgatat gccccagccc
     9841 gccaatacca attaccccaa cgcggctggt agcagtgata tggtgcatca acagtggttt
     9901 aaagaccgtg ataccgccgc acaacagcgg cccggcggac tcgatatcaa tattttcagg
     9961 cagtggaatc acccattgcc agtccgcacg caacttctcg gcaaagccac cgcgattcat
    10021 aatcgtcggc accgcacctt gctcgcagtt gatctgatta ccgctaatac aggcgtcgca
    10081 gtgaccacag ctacgcgccg tccagccaat cccgacacgc tgaccgacct gcaaaccttt
    10141 atcctgcgcg gcgctcccga gtgccaccac gcgcccaatc acctcatgcc cggcaaccag
    10201 cggatattgt gaaaatcccc attcattgtc gatcatcgat agatcggaat ggcagatccc
    10261 gcaataatcc acctgcactt caacatcttg tggcctcagc tcaccgggat cgtactcata
    10321 aacttccagt tcgccgcccg cttcttttgc ggcatagctt tttatcatcg acattttttg
    10381 gtccttctct ggtgttgttt gggaagtgta gagcatggca gggcggggtg cctggagtgt
    10441 gacaaaggtt acacatcgct gtgtgcaatg ctgaaaattt cagcacttag cgaggtgcga
    10501 gcaagctggc gcttgcatgg tggcgtgcga caggtataat ccacaacgtt ttccgcatac
    10561 ctcttcagtg ccgaagtggc gaaatcggta gacgcagttg attcaaaatc aaccgtagaa
    10621 atacgtgccg gttcgagtcc ggccttcggc accattctta cttccaagac catccgagaa
    10681 agtccaaata tccctttaaa atcaatgctt gcagcgattt tttcgtcctg cgtcttccga
    10741 ggttgtccgt tgaaatccgg atatcattgg gggcataatt gggggcatct taacttcgat
    10801 tagaaatgtg cccccaaatg aagctcaacg ccagacaggt cgagaccgca aagccaaaag
    10861 acaaaaccta caaaatggcc gatggtggtg gtttgtatct tgaggtttcg gccaaaggtt
    10921 ccaaatactg gcgcatgaaa tacagacgtc cctctgacaa aaaagaggat cgtctcgcgt
    10981 ttggtgtttg gcctactgtg acgcttgctc aggcaagagc aaagcgcgat caagctaaaa
    11041 agctgttagc gcagggcatt gatccaaaag ccgaacagaa agaagctcag gccgagaatt
    11101 cgggggcata ttctttcgaa actatcgctc gtgaatggca tgctagtaat aagcgctgga
    11161 gtgaagatca ccgatcacgc gttctacgtt atcttgagct ttatatcttt cctcatattg
    11221 gttcatctga catccgtcag ctcaaaacta gccacctatt agccccgatt aaaaaagttg
    11281 atgccagtgg taagcatgac gttgcacagc gccttcagca gcgtgtcacg gctattatgc
    11341 gttatgcagt acagaacgat tacatcgact caaatccagc cagtgatatg gccggtgcgc
    11401 tatcgacaac caaagcgcga cattaccccg ctttgccctc cagccggttc cctgagtttc
    11461 ttgctcgtct tgctgcatat cgtggccgtg taatgacgcg gatcgcggtt gagctttcct
    11521 tactaacttt tgtgcgttcc agtgagttac gtttcgcgcg ttgggatgag ttcgacttcg
    11581 ataaatctct ctggcgagta cctgcaaaac gagaagaaat taaaggtgtg cgttactcgt
    11641 accgtggcat gaagatgaaa gaggagcata tcgttcagct tagtcggcag gcgatgattt
    11701 tgctaaacca gttaaagcag attagtggag ataaagagct gctttttccg ggtgatcatg
    11761 acgcaactaa ggttatgagc gaaaacacgg taaatagcgc attgcgtgcg atgggctatg
    11821 acacgaaaac cgaagtttgc gggcacgggt ttagaacgat ggcccgtggt gcgttgggcg
    11881 agtccggatt atggagtgaa gatgctatag aacgacagtt gagccattca gagcgtaata
    11941 atgtacgtgc tgcttatatt cacacctctg aacatttgga tgaacgtcga ttgatggttc
    12001 aatggtgggc tgattatctc caagcaaata agggcaaaac aataacacct tatgattttg
    12061 ctaaaataaa caaaagtcga tagtgaaaat aaacgcctat aatatatagg cgtttatttc
    12121 tgtattaaac actttgatca taatcttcca gcagcaactt tttttcgtac ttcatctttc
    12181 caattgccac tatggattat tctatcgaaa ttacttcctg ctcttcctga taataagtca
    12241 attcgagata gcttgctgat atcatcccag ttatcataga ggatatatat agcattacca
    12301 tattctatgt tttcaaatac aaccaaatcg tcctccagca tagctccaat ataattactg
    12361 aacgtgctgt ttcctgtgac gattttttta ggttcaagac tcatgaagaa gtcatatcta
    12421 ttttcagcga catttttctt gtcggaagtg atatttttac ctctaaaaat tcttgctaaa
    12481 gtttcttctt tactacctgg tggaaatatt tcccatgaga ctataagtgt atcagcataa
    12541 gtcgatatgg gtttatcagc atcctcaatt ccacatttac caagattttc ttgaagaaga
    12601 tttaaatcaa ataataattc atcatcaaac ttatttgatt gtttgtctaa aattctagtt
    12661 actctgaagt taaatatgaa atggctgtcc gagggctgtt tgtgattaat ttcaatggct
    12721 atgagtgttg gtggtataat gtctctggga tatttctcgt aaggtaatct aacagtatgt
    12781 gtaccattag agctatcacc ccagttaggt gactcaattt cagtgtaatg agtttctttt
    12841 gggaggtctt ttctgacaat ttcttcacca aaaacatttt taagtgaata tttaccctgc
    12901 aatggatctg gtatgaccga cgtctcataa gcattaacac cattatcaaa atatattcca
    12961 aggtgctcta atgctccact ttttaattgg ttttccgtaa atgcaataga agtgccagca
    13021 acaactgtat taccaagcct tcttaacttg ctatgaatat ttttaggtat aacacgtata
    13081 ttctttttca tttttccctc atacttgatc atcaatgtct ctttgctctc gcttgttatg
    13141 taaatcattg ataaacataa catttgcaag tattacgcta attactgcct caatctgcat
    13201 gtacgaaata gcaataatta atgctaaaga tgtgtttttt attacatctt ggctctctaa
    13261 ataaagatga cttttgaaaa acactagttt aactaagtat acaacaagta aagtaatcat
    13321 aacgaaagat gattttagaa cacttccaac tattgcttct aatcttcttg tatcttccag
    13381 ttgttcggtg aaatcaacgg tttctatagt tttggggttc acaatacgct gcaaagcatt
    13441 tgggtaaaga aacgctaacc aaattcccat aatagtaaaa accattccag aaactgatac
    13501 gagaagagtg caatagttgg caaaatcgtt atacacatag ttaatatcgg atgacgaaat
    13561 aatcatcagc gatataatga atatcgccat gtatatccat gtgtatttgg ctatgcctgc
    13621 tatagctttc aatattcaat cctctccaga tgctttcttt attcttggtt gagattgtaa
    13681 tgcttttaat tcttttaata taggggaaat aaattctttt cttttgtgtg atatttgttc
    13741 ataaatatat gcggcggaat atgttgaata gtcgtcagaa gggacattga gaatatcacg
    13801 cattctatat ttatccaccc aagttatacc cttgtctgta gcaaatccaa cattgtccca
    13861 aagacgtttt tctctatcct cagccgaata cttttcaatg atttcttgaa cttcattcaa
    13921 ggatggtttt gcttctgctt ttatttcaat ttgtcttgtt ttggcatttt tctttccgga
    13981 cacaaatgga acgagagtgc taaaggtctt taaccaatca gctcgtgcat catttggatt
    14041 tataataata gtttccctgc gaactatgtg tgttattttt ggtattagtt tacctaactc
    14101 agtatgagtg gtttctaagc ttctgagctt catatcaaac ctgtacatat atttatataa
    14161 gtcttcgtca tcggtattag atagccttat ataacctttc tcggttttat ttttaaccct
    14221 tttgctatgt ttaactctat tagtaataga tgagtgtaca tagtcttgaa atagttcaga
    14281 atcacaaaca gaatggtcga atttaatgga tactatagtt tcaagttcag gtataaccca
    14341 ataaaagcat ggccgccccc agataacttt tttccctctg tagctattag tatatttaac
    14401 caccgatgag cttccgattt caccgtcttc actagctcct aataaagagc ccgtactatc
    14461 agtatcagat ttccataaca tgactaagaa atcaccagta ttttcatcct tataaatatc
    14521 cttgcaataa cactttgaac tgtttggttt ttcttttgga tcccatggta tcgtgagtgc
    14581 aagagattta gttcccaccc aatcctgtat gaggtcaaat gtttcgctaa gttctaaacc
    14641 ataggtattg tcatcattta ccttgtataa accgcactta ttaaccttga agaaattgag
    14701 atgccctaca ttcatgctct ttccttagct tcttatcttg ggatatgtat catgatcaaa
    14761 aattaagcat aaccccattg acttcgtgcg ggcaatgttt tcaccctaga atttgatcgg
    14821 tttaacgtta aatattcata agttacatga gcatttttca cttcttccca attacagacg
    14881 tcatgagctg aatattaata aaataattat cctcacggca tggcgcgcaa tgctctcccc
    14941 gtcacgcccg cccgctttgc agggcggttt taatgcagtt gcacagtcac gctcaggctg
    15001 cgccgggaat ggcgcggtct gcagaaaatg aggcaggaaa acgcatgcaa agccatgcac
    15061 cttatcgatg catggctttt ttcagtaaaa acgggcggat tttcggggaa ttttacacag
    15121 actgacgtga tgccagttgc gcacttttac gcgaaaaaat catgttctgc gcaggggtga
    15181 atttttcacg gctgtcatcc accgaagtcg cgtcaggcct gaatccgatg gtcgttaaaa
    15241 tgtcactatc ctgtgcggaa taattaattt tttccccctt cgcaagccag gacagaaggg
    15301 cttcacgcag ggcatctgtg gcacgctgta tggcacagtt tcgggcaatg gccgtcagct
    15361 cactgtagcc catcagctcc ggtgccagtg ccgccgccag tgctgtgccg tgctgctgca
    15421 taaaatcatt cagccggtcg cggatgctga tgtgctgaac ggcttcatgc gaacgaatat
    15481 aacgaccggc agcctgattc acctgccatt ttctgacttc gataatattg cgtaattcgt
    15541 ccaggcgact gacgtttctg ccttccccgg acagaagccg cagatattcc tgttcggccg
    15601 cagccagctc atttttgcgt tgcagccatg ctgctttgtt attctgacag gtgtcaaagg
    15661 cctgctgtaa ggctgtgctt tccatcgtta tctctttctc atcatgctga agaataaaaa
    15721 tacggtgtgc ggcgacggcc ggtgttaacc ggcagccctc attccagacg cagcgaatat
    15781 gattgtgttt ttaagcgtac tggcggcagt tcctgttttt catgcaggct ttctgccagt
    15841 tcgtccggcg tgaccgggcg gacaataaaa cggttgatgg tctgaagcgt tttaaacacc
    15901 agaccacagc ccggatccgt gcacacataa aaacgctcgg tgacttcctg agacagacgc
    15961 cgcgatgttc ttgacagtgc aaggccttta catctccgac aacaatatcc ggtaacaagc
    16021 attcttttcg ggcgtttcat actgccggag gctgacgtca gtgaatcgcg gtatctctgt
    16081 ttgcctgaaa tgtattccat tcctgaatct ttacagtcag agaaaaagct ttcactcgct
    16141 tcaaatgtcg cagagcaata aatattccgg cactgtgcaa tcattatctt ggtgccatcg
    16201 tccatgaaat gtgcgcgacg ggtgtgagca acatgtccac acgacgggca gtaaatcatg
    16261 acagcagtcc tctggcctta agctctgctc cctgctggtc tattttgtcc tgccacacct
    16321 tgcgctgtgc cggtgtgcct gccacctcat aatccatgtg cgggagtgtt gccgctgaca
    16381 gtccggtcag ccggagaacc ggctcgccgg tgaggctgat ttgcatctgt ttaattttct
    16441 gttccagcga tgatttcacc tgctgcatga cagccttttc cggtgcgacg tagccctgat
    16501 ggccggtggt gttggcgagc ggattttcct gtaccaggat actcagatgc attgcccgga
    16561 caagcgcctc acaggtttca ttcagggcgt gttccagctc atgctctgca tacagactca
    16621 gcaggtgatg atgtgccttc cggtaggcgg tggccgtgct gtcacacgcc cctttcaggc
    16681 gttcacgttc aaaattcagc accacggcca gattgtcata ttcctgtacc agctcccggc
    16741 gtgccacgcg ctcaatgtgg cgctgtttca gctcgtcgct caggacacca ccggctgcac
    16801 gaaaggccgt gcgccagtcg tcagcgtcat ttccgtcggc ctgcgccagc gcattttttt
    16861 cctgctctgc ccgttcaatg gccgtgacgg tctcatccat caggcgggcg ttctcaaggt
    16921 gggcggctct ggccttttcc agttgtgcca gtgcgggttg cagatattca gggatggtgt
    16981 tgtcagacat tttccggctc ctcgtcactt caggttaaga aaattgtgac gtacaccgga
    17041 caacaacacg acgcattgca gatgtgccag ccctgacaca ggagactcat cctcagaccg
    17101 gcaagccagg aaaaggtcgc aggaaaaacc ggcttactgt ttgttttttt atattttact
    17161 gttcacctct gttcaccata agaaaaaaga taagtaatac agtaagttaa agggtgaaca
    17221 atcgcagtaa tgactgttca ccgtctgttc accactgttc acccgctcat agactttttg
    17281 tgctgtttat tactttttat ttttattaat ccactgaaat aaataagaaa aaacaatttg
    17341 tatttcacta taattttttc cagctccttc cagagcgttt taaagccatc tggcgctgat
    17401 gtataaaaaa tacacagcca ttgtaagact gccggaacaa atcccccctg ttgcatctgc
    17461 caaaaatatt cacaaaataa agcgctaccc gaagccggac ggacttatcc ggtgctgtat
    17521 ggacattaac gaggtagccc gatgcaagct gttttttctt ccccgtctcc cgcccctgtg
    17581 acgccactga tgccgctgcc ggacatcacg caggagcgtt ttttacgtct gccggaagtg
    17641 atgcacctgt gcggcctgtc acgctcgacc atctatgaac tcatccgtaa gggggaattt
    17701 ccgccgcagg tgagtcttgg cggtaaaaat gtggcctggc tgcactctga agtcaccgca
    17761 tggatggccg gacgcattgc cggacgcaaa cgggggtacg acgcatgatg atgcccgctc
    17821 tgcaaaaact ccctttttct ggcttgcctt tttccggcat ttgcggatat agtttttccg
    17881 ctgccgcaaa atcggcagcc gggcgtgaga acccgagcaa ttcacaggcg acatatgacg
    17941 cgccacgcgt ctttttttgt gtcgcaatca atgccacaga gcgccagatt atggtgtggt
    18001 gtgtggtcag tcgtgcagat ggcattccgt gcatcctgcc cgcgtccgct cattatgccg
    18061 cagagtcaat ggtagctcag gcggggcagc ctccgggctg gccggtatcc tgtgaagccg
    18121 gtattctcac ccccgtctgg gctatcgcca tcgagcgtga gaactccggc gatagcgtta
    18181 tttgctattc acaggaggct gccatcatgg ctacaaccct taccccctca caccctgaat
    18241 ttgtctttgt gtttgcggct gtccgtcgcg cagaccgtca tccccgtatc tgtatgcttc
    18301 gcaccgtggc cggtgatgaa cgcagtgccc gccgttccct tgtccgtgac tatgtgctct
    18361 cccttgctgc ccgtctgccg gtggtggagg tgtcccgtgc gtaataaaaa agcccctcag
    18421 accgtctcag cacgtcatga cgcccgtgaa cacctcagca ttgaggctta ccataagctc
    18481 aaccgcgcca gcgccgtatc ccagtttgtt gggggtgatt tgattcaccg tgaactctcc
    18541 ggcctgcatc agctctacat tccgcatatt ttcagctacc tgaatgaaga tattgatttt
    18601 gtgctgaatg agctgaaagc caaaggcctg tgccgcgatt ttctcgccca gcagaaagac
    18661 cggggagaca ggacgcatgt ttgattttcc ccagcccggt gagatttacc gttctgccgg
    18721 ttttcccgat gtggccgtgg tcggcattct ggaagacggt attccgtggg aaatgccgta
    18781 ccgctgcccg gacattgtct ggaacccgta ccgccgtaaa ttcagtatcc ttgtgcgtat
    18841 cctcgccgac gggcgcacca cagacatccc gctggggcgt tttctgcggg aatttacctg
    18901 tgaccgtcct gacctgttta aacgcagccc cgtaaaccgg catgcggtac tgaaagaaat
    18961 ggccggagac ccggaattac agaaatggcg ggagaaatat caggatattt acccgcagga
    19021 cactgttccg gtcagccggg cagcaccggt agcgcgggaa tggcgggaaa ttccccgcac
    19081 ggagcctgac ccggaaatca ccccggataa cagttaccgc aattatctgt aattaaaaaa
    19141 cgacacccga aaaattaaat gtgcgtattc gcgcagggat acgcacgtct tcaggagacg
    19201 cagatatgcc ttatcagtta atgcaaccgg cacggaatgc agtcatctgt cacagggagg
    19261 aaagcaaatg aaaacaccct taccgcccgt cttacgcgca gccctttacc gtcgtgctgt
    19321 cgcctgtgcc tggctgaccg tgtgcgaacg tcagcaccgc tacccgcatc tcacccttga
    19381 gtcactggag gcggccatcg ccgctgagct ggaaggcttt tatctgcgcc agcacggtga
    19441 ggaaaaaggg cgtcagatag cctgtgccct gctggaagat ttaatggaat ccggccccct
    19501 gaaggccgca ccgtcgctgt cctttctcgg gctggttgtg atggatgaac tctgtgcccg
    19561 tcacataaaa gcgccggtac tgcactgaag gagaacaaca ccatgaaaat gaacgtaacc
    19621 gccaccgtca gccatgcgct cggccactgg ccgcgtattc tcccggcgct ggggattcag
    19681 gtgctgaaga accatcatca gccctgtccg gtctgtggcg ggagtgaccg cttccgtttt
    19741 gatgacaggg aggggcgcgg cacctggtac tgcaatcagt gtggtgccgg tgacggcctg
    19801 aaactggttg aaaaggtgtt tggtgtctcc ccgtccgacg tggccgcaaa ggtggctgcc
    19861 gtgaccggca gtctgccccc ggctgacccg gcagtgacgg ccgccgccgt tgctgaaaca
    19921 gacgctgccc ggaagaacgc cgccgcactg gcacaaaccc tgatggcaaa aacccgtccc
    19981 ggaaccggta acgcctacct gacccgcaag ggctttcccg gccgggaatg ccggatgctg
    20041 accggcacac acagagccgg tggcgtgagc tggcgcgccg gtgaccttgt ggtgccactg
    20101 tatgacgaca gcggcgaact ggttaacctt cagttaatca gtgctgacgg ccgtaagcgc
    20161 accctgaaag gcggacaggt caggggcacc tgtcacaccc ttgaaggaca gaatcaggcc
    20221 ggaaaacgtc tgtggatagc ggagggatac gcgaccgcac ttaccgtaca tcacctgacc
    20281 ggtgaaacgg tgatggtggc gctttcttcc gtgaacctcc tttctctggc cagccttgcc
    20341 cggcagaagc atccggcctg tcagattgtc cttgccgcag accgtgacct cagcggtgac
    20401 ggccagaaaa aagccgccgc agccgcagat gcgtgtgaag gtgttgttgc cctgccgccg
    20461 gtcttcggtg actggaatga tgccttcacg cagtacggcg gggaggtcac ccgtaaggcc
    20521 atttacgatg ccatccggcc accggctgaa agcccgttcg acaccatgag cgaagcagag
    20581 ttttccgcca tgagtaccag cgaaaaggcc atgcgtatct atgagcatta cggcgaggcg
    20641 ctcgcggtcg atgccaacgg ccagcttctg tcccgctatg aaaatggtgt ctggaaggtg
    20701 ctgccgccac tggactttgc ccgggatgtg gccgggctgt ttcagcgtct gcgcgcgccg
    20761 ttctcctccg ggaaggtggc ctccgtggtg gacaccctga agctgattat tccgcagcag
    20821 gaagccccct cccgccgcct gattggcttt cgtaacggtg tgctcgacac acagaacggc
    20881 acgttccacc cgcacagtcc gtcacactgg atgcgtaccc tgtgcgatgt ggatttcacc
    20941 ccaccggtgg aaggggaaac gctggaaacc cacgcccccg cgttctggcg ctggcttgac
    21001 cgtgccgccg gtggccgtgc ggaaaaacgc gacgtgattc tggccgcact gtttatggtg
    21061 ctggcaaacc gctacgactg gcagctcttt ctggaggtga ccggtcccgg cggcagcggc
    21121 aaaagtatca tggccgaaat cgccaccctg ctggccgggg aggataacgc cacgtcggcc
    21181 accattgaga cgctggaatc cccgcgtgaa cgtgccgcgt taactggctt ctcactgata
    21241 cgcctgccgg accaggaaaa atggagcggc gacggtgccg gactcaaggc catcaccggc
    21301 ggcgatgcgg tgtccgtgga cccgaaatac cgggatgcgt actccacgca tatcccggcg
    21361 gtgattctgg ccgtgaacaa taacccgatg cgcttcaccg accgcagcgg cggcgtgtca
    21421 cgccggcggg tgattattca cttcccggaa cagatagccc cgcaggagcg cgacccgcag
    21481 cttaaggaca aaatcacccg cgagctggcg gtcatcgtgc gtcacctgat gcagaagttc
    21541 agcgacccga tgctcgcccg gtcactgctt cagtcccagc agaactcaga cgaggcgctg
    21601 aacatcaaac gggatgccga cccgacgttt gattttatcg gctatctgga aaccctgccg
    21661 cagaccagcg gcatgtatat ggggaacgcc agtatcatcc cgcgtaatta ccgtaaatac
    21721 ctctatcacg cctatctggc ctacatggag gcaaacggct accggaatgt actcagtctg
    21781 aaaatgttcg ggctggggct gccggtgatg ctgaaggaat acggactgaa ttacgagaag
    21841 cgccatacca aacaggggat acagaccaac ctgacactga aagaggaaag ctacggcgac
    21901 tggctgccaa aatgtgacga ccctgcaaca acctgaccca cctgaccggc atctgccggt
    21961 ctttttttat cccgacctcc cccgaaggtg aacaatccac tgttcaccct tcaccgtata
    22021 ttcacccgtt atcacactga aattaaaaga gaaaaatgaa aggtgaacag tgtgaacagt
    22081 tctttcgaaa aaaaattttt tatgtggata aaagatgcac tggtttggat ccgggctacg
    22141 gatccaaact tactgattaa aaattattta actttccgat ttattgatgg gctgaaaata
    22201 gattggtcag aaaaacagtg ggggcacaaa agggggcata tttcattgtt gtgttttatt
    22261 atttgttttt tatcattaac ttattttgat atttgagtcc ggccttcgca ccaaaagtat
    22321 gtaaatagac ctcaactgag gtcttttttt atgcctgaaa tccgcgctac acaaggcttt
    22381 tccagctttt cccctcaact gaagtcaacc tgactcaacc cacatcaaca ggcttgtgag
    22441 tatactaatg agtatatttg ccgattcgat attgcttgta tactcacgag ataccaatgg
    22501 aaggaagacc attatggccc taacggatac taaagttcgc tctgcgaaac ctgaggagaa
    22561 agagtattca cttgttgacg gcgacggcat gtccttactt gtaaaacctg gcggttcaaa
    22621 gtattggcga tttcgtttcc gttttggcgg taaacaacat ttgatggcgt tcggcgttta
    22681 cccggatgtt tcgctggcgg atgcgcggaa gaaaagggaa gaggccagaa agctggtagc
    22741 tgctggtatc gatcctcgtg agcataagcg tgctgtgaaa gaagagcagg cgaaagagat
    22801 tattactttc gagaaggttg ccagagagtg gctcgtaacc aaccaaaaat ggtcggaaga
    22861 gcatgctaat cgtgtaaaaa agagcctgga ggacaatatc ttcccggcaa ttggttccca
    22921 caatattgct gaactgggca cccgcgatct gttaattcct attaaagccg tggagaaatc
    22981 cggacgtctt gaagtggctt cccgccttca acagcgcacc acggccatca tgcgttatgc
    23041 agtgcaaagc gggttaattg attacaatcc ggcgcaagag atggcggggg cggtagcttc
    23101 cagtaatcga cagcatcgtc cggcgctgga gttaaagcgt atcccggaat tactccagaa
    23161 aatcgatgaa tacaccggca ggccactaac ccgctgggca accgaactta ccctgcttat
    23221 ttttattcga tccagtgagc tgcgttttgc tcgctggtca gaaatcgatt ttgaaacgtc
    23281 aatgtggacc atcccgcctg agcgagaacc tattcccggt gtgaaacatt ctcagcgagg
    23341 agcaaagatg cgtacacctc atctggtgcc gctttcaaag caggcgctag cgatcctgaa
    23401 gcagataaaa cagttctgtg gcgaacatga gctgattttt attggcgatc acgatccgag
    23461 taagcccatg agtgaaaaca cggtgaacag tgcattgcgg gtgatgggct atgacaccaa
    23521 ggttgaggtt tgcggccacg gcttccgcac tatggcctgt agctcattga ttgagtcagg
    23581 gttatggtcg aaggatgcgg tggaaaggca gatgagccat atggaacgca attcggtgag
    23641 ggcggcgtat atccataaag cggaacatct ggatgagcgc aagctgatgt tgcagtggtg
    23701 ggctgatttt ctggatgcga accgggagaa ggggattacg ccgtttgact atgcgaagat
    23761 caatcggggt aatggcgagt gagttatcta aaagcgcaca ttcgcctcta aattgaaagc
    23821 tgctgactta ttcaaacgag gaattggtca gcagtgccaa atagccgagt tttcactaag
    23881 gtaagccttt ttattgaacc taatcggcag taatgctcca cctaagccta aatttaaagt
    23941 catgattact tataaaaggg gagtggaccc ttgattgagc cctacatcgt aacaaaggta
    24001 cagcaattcg gctacatcag gagtgatagt caattagtta atctaataat taattgaatc
    24061 taaataatta aatttcttac gtaaaattga ccaatttact ggtggtgtaa gccgcaatat
    24121 cttaatgtaa tcagtataaa ggggcttgat ttcttttaaa gatagtatcc gtatgaattt
    24181 taagaaaaaa ctcgaagagc attttaagca gttcgaagca tccccagtgt tatttgtcgg
    24241 ctccggtgtg tctcgtcgtt atcttggtgt gccatgttgg caagaccttt tgaagcattt
    24301 tgctgaggca attggggaaa atcatataaa attaaaaaca aaatctaatg gtgacttacc
    24361 cgaatatgca caattattgg tgtctgcata tgctgagaaa tggtgggata ctgaagaagg
    24421 acaattagca ttaagtgaaa aagaacagga gaaaactttc attaacgaac agtctccttt
    24481 gaagttgtca atatctaaat atattgagaa tgcacataaa aatattatag ataatgatga
    24541 gttaaaacat ga
//
LOCUS       DADMIB010000050        24548 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.050, whole genome shotgun sequence.
ACCESSION   DADMIB010000050 DADMIB010000000
VERSION     DADMIB010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24548
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.050"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..146)
                     /locus_tag="JNZ89_001894"
     CDS             complement(<1..146)
                     /locus_tag="JNZ89_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY8935797.1"
                     /translation="MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYF
                     TNDKR"
     gene            complement(405..1286)
                     /gene="yddG"
                     /locus_tag="JNZ89_001895"
     CDS             complement(405..1286)
                     /gene="yddG"
                     /locus_tag="JNZ89_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415990.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid efflux DMT transporter YddG"
                     /protein_id="HAY8935798.1"
                     /translation="MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLS
                     GLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATRHQAIEAGMVNYLW
                     PSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGENGLHYDEIINNITTSPLSYF
                     LAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWVYYFLTQQPEMVFSTPVMIK
                     LISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGA
                     LMVCGGSLLCWLATRRG"
     gene            1518..4565
                     /gene="fdnG"
                     /locus_tag="JNZ89_001896"
     CDS             1518..4565
                     /gene="fdnG"
                     /locus_tag="JNZ89_001896"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:2103..2105,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HAY8935799.1"
                     /translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK
                     EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV
                     NSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS
                     TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIAVDPRFTRTASVADIYAPIR
                     SGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD
                     KSSWNYQFDENGYAKRDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE
                     VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLAGQVNYWSNYPKFFVSL
                     MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK
                     NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG
                     SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNY
                     KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT
                     GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI
                     QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP
                     LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA
                     QPEQFVEISETLAAAKGINNGERVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI
                     PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA"
     gene            4578..5462
                     /gene="fdxH"
                     /locus_tag="JNZ89_001897"
     CDS             4578..5462
                     /gene="fdxH"
                     /locus_tag="JNZ89_001897"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HAY8935800.1"
                     /translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA
                     CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH
                     CEAPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKC
                     TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEG
                     VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHY
                     IGIGPNKEVDDDEEDHHE"
     gene            5455..6108
                     /gene="fdnI"
                     /locus_tag="JNZ89_001898"
     CDS             5455..6108
                     /gene="fdnI"
                     /locus_tag="JNZ89_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit gamma"
                     /protein_id="HAY8935801.1"
                     /translation="MSKSKMIVRTKFIDRVCHWTVVICFFLVALSGISFFFPTLQWLT
                     QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHK
                     VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
                     ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI"
     gene            complement(6159..6443)
                     /locus_tag="JNZ89_001899"
     CDS             complement(6159..6443)
                     /locus_tag="JNZ89_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HAY8935802.1"
                     /translation="MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTG
                     KAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ"
     gene            complement(6589..7599)
                     /gene="adhP"
                     /locus_tag="JNZ89_001900"
                     /pseudo
     CDS             complement(6589..7599)
                     /gene="adhP"
                     /locus_tag="JNZ89_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415995.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
     gene            complement(7733..9430)
                     /locus_tag="JNZ89_001901"
     CDS             complement(7733..9430)
                     /locus_tag="JNZ89_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HAY8935803.1"
                     /translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG
                     LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV
                     IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG
                     LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI
                     IDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA
                     VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSEEAARQKVFM
                     VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ
                     TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV
                     WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLV
                     LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI"
     gene            complement(9587..9724)
                     /gene="sra"
                     /locus_tag="JNZ89_001902"
     CDS             complement(9587..9724)
                     /gene="sra"
                     /locus_tag="JNZ89_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary-phase-induced ribosome-associated
                     protein"
                     /protein_id="HAY8935804.1"
                     /translation="MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAE
                     K"
     gene            complement(9826..10041)
                     /gene="bdm"
                     /locus_tag="JNZ89_001903"
     CDS             complement(9826..10041)
                     /gene="bdm"
                     /locus_tag="JNZ89_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310112.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm-dependent modulation protein"
                     /protein_id="HAY8935805.1"
                     /translation="MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWV
                     EASDNDILSDIYQQTINYVVSGQHPTL"
     gene            10387..10818
                     /gene="osmC"
                     /locus_tag="JNZ89_001904"
     CDS             10387..10818
                     /gene="osmC"
                     /locus_tag="JNZ89_001904"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin OsmC"
                     /protein_id="HAY8935806.1"
                     /translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEK
                     GTNPEELIGAAHAACFSMALSFMLGEAGFTPTSIDTIADVSLDKVDAGFAITKIALKS
                     EVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS"
     gene            complement(10874..11800)
                     /locus_tag="JNZ89_001905"
     CDS             complement(10874..11800)
                     /locus_tag="JNZ89_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY8935807.1"
                     /translation="MSDTLLTLRGVHINFPARKNWLGKTTEHVHAINGIDLQIRRGET
                     LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI
                     ITEPLWIAKRSSEQQRRALVEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ
                     PDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYL
                     GQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFF
                     YERCPLATSGCEVRQSLAIREDGRELRCWRAL"
     gene            complement(11793..12779)
                     /locus_tag="JNZ89_001906"
     CDS             complement(11793..12779)
                     /locus_tag="JNZ89_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8935808.1"
                     /translation="MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGES
                     GSGKSVTAMLIMRLLPTGSYCVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPM
                     TALNPTRRIGLQMMDVIRHHQPISRREARAKAIVLLEEMQIPDAVEVMSRYPFELSGG
                     MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMA
                     VVSQLCDSVYVMYAGSVIESGVRADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGT
                     VPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV"
     gene            complement(12776..13672)
                     /locus_tag="JNZ89_001907"
     CDS             complement(12776..13672)
                     /locus_tag="JNZ89_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D,D-dipeptide ABC transporter permease"
                     /protein_id="HAY8935809.1"
                     /translation="MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLML
                     LMMFFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLV
                     VVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAM
                     LAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQA
                     SLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPRAAILLTAV
                     GFNLFGDGIRDLLDPKAGGKQS"
     gene            complement(13669..14691)
                     /locus_tag="JNZ89_001908"
     CDS             complement(13669..14691)
                     /locus_tag="JNZ89_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8935810.1"
                     /translation="MTFWSILRQRCWGLVLVMAGVCVITFIISHLIPGDPARLLAGDR
                     ASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLE
                     LAFCALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGH
                     LQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGI
                     VARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYG
                     AVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRI
                     GRGGGE"
     gene            complement(14693..16243)
                     /locus_tag="JNZ89_001909"
     CDS             complement(14693..16243)
                     /locus_tag="JNZ89_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY8935811.1"
                     /translation="MKRSIPFRPTLLALVLATTFPVAHAAVPKDMLVIGKAADPQTLA
                     PAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDN
                     AKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFL
                     YTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYP
                     GNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLR
                     VTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATA
                     MQYNHDETKAKAEWDKVTSKPTSLTFLYSDKDPNWEPIALATQSSLNKLGINVKLEKL
                     ANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKL
                     LRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQV
                     FNINTMSK"
     gene            complement(16257..16838)
                     /gene="ddpX"
                     /locus_tag="JNZ89_001910"
     CDS             complement(16257..16838)
                     /gene="ddpX"
                     /locus_tag="JNZ89_001910"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HAY8935812.1"
                     /translation="MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHK
                     DAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGT
                     AIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
                     SEWWHFELPQAASYPLLADQFTCFISPGTQHVS"
     gene            complement(17096..19495)
                     /gene="dosP"
                     /locus_tag="JNZ89_001911"
                     /gene_synonym="pdeO"
     CDS             complement(17096..19495)
                     /gene="dosP"
                     /locus_tag="JNZ89_001911"
                     /gene_synonym="pdeO"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-sensing cyclic-di-GMP phosphodiesterase"
                     /protein_id="HAY8935813.1"
                     /translation="MKLTDAENAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL
                     WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW
                     TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ
                     CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT
                     GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE
                     IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEVQNAQSWSATIRQRDGAPAGIL
                     QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN
                     YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFRGKLKPDQYLCRI
                     EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDVGKNHDYL
                     LSTAHNAIDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF
                     AETGELYGIEALARWHDPQHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS
                     QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK
                     RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI
                     TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK
                     I"
     gene            complement(19520..20901)
                     /gene="dosC"
                     /locus_tag="JNZ89_001912"
                     /pseudo
     CDS             complement(19520..20901)
                     /gene="dosC"
                     /locus_tag="JNZ89_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310122.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DosC"
     gene            complement(21273..22592)
                     /locus_tag="JNZ89_001913"
     CDS             complement(21273..22592)
                     /locus_tag="JNZ89_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 10 glycosylhydrolase"
                     /protein_id="HAY8935814.1"
                     /translation="MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSK
                     PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG
                     INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF
                     NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS
                     IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIT
                     KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD
                     YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING
                     GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS"
     gene            complement(22723..24258)
                     /gene="gadC"
                     /locus_tag="JNZ89_001914"
     CDS             complement(22723..24258)
                     /gene="gadC"
                     /locus_tag="JNZ89_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance gamma-aminobutyrate antiporter
                     GadC"
                     /protein_id="HAY8935815.1"
                     /translation="MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF
                     FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG
                     FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF
                     FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE
                     ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT
                     VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK
                     NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL
                     VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV
                     VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND
                     KKH"
BASE COUNT         6127 a         6187 c         6190 g         6044 t
ORIGIN      
        1 cgcttatcat tagtaaaata acgtagagcg gtaaccttgc cataaaggtc gagtttatta
       61 ccatccttgt tatagacttc ggcagcgtgt gctacgttcg cagctaacaa accagttaca
      121 accaccgcaa ctatttttaa tttcatttaa cagaatcctt ttaattatcg tcaaacgtat
      181 tttctaaacg aattttaaac ggcgtcattt ataaatgaca tactgttttt aaaatagaat
      241 ggtgattaaa aacaatgaga aaaatagatg agataatatt atttatcgat atgtgatcga
      301 agtcgaaatg agatataagg tgaattactg gtatttgaaa tttatttttt aatattgtcg
      361 gaatttatct gattaactgc cgggccgtag acccggcaat tattttaacc acgacgtgtc
      421 gccagccagc agagcaggga accgccgcag accattagcg cgccttgcca gaatgagaac
      481 gacagcgggg cgctgagcag cacggctgca agcgctgagg aaagtacggg cgtaaaatac
      541 gagcctaccg ccattatggt gacattgcca tgcaatatac cgacattcca tgcagcataa
      601 gcaaatccta aggtaaatgc cgcagagatg agtttaatca tgacgggcgt gctaaatacc
      661 atttctggtt gttgcgtaag aaaatagtaa acccacagac ttgctcccgt tagcaggaca
      721 aaaacggtaa ttccgttaaa tccgcgtgcg tatttattcg ttactgtgca ataggctgcc
      781 cagataaacg caccaataaa cgccaggaaa taactcaatg ggctggtggt gatattattg
      841 atgatttcat cataatgtaa cccattctca ccgcctaaca cccagcagac gccgaccagg
      901 gctaataata atcctggtac aatcagccag ttggttttct gaccattaaa cagaatggca
      961 aagagaattg tcaggctggg ccacagatag ttcaccatac ccgcttcaat cgcctgatga
     1021 cgggtcgccg cataccctaa ggaaagcgcc agacagattt catagctgac gaataacaga
     1081 ctcccggcga gtaaatagcc tttcggaatc tgccgaatac gcggaaatcc aaccgtgaag
     1141 attaacagca gcccgcttaa tgaatagata gcagctgcgc cgccgaccgg gccgagcccc
     1201 tcgctgacac cgcgaatcaa tcctaccatc gtgctccaca ggacgatcgc tattagccct
     1261 atgagcgttg ctttttgtcg tgtcatgctc gctgttttgt ctctcttgcc gttaaaaatt
     1321 aagctgaatt ttatagcatt tttttaactg gcctgtcagg cagtggtgcg tttttctacc
     1381 gctattgagg taggtcaatt tgcgcaggcg gattattttg tggcaaacac gtgttctttt
     1441 tgatttcgcg caaaaagatt cagaatttta ctgttagttt cctcgcgcag taatatccct
     1501 gaaaaaagag gaaagcaatg gacgtcagtc gcagacaatt ttttaaaatc tgcgcgggcg
     1561 gtatggctgg aacaacggta gcggcattgg gctttgcccc taagcaagca ctggctcagg
     1621 cgcgaaacta caaattatta cgcgctaaag agatccgtaa cacctgcaca tactgttccg
     1681 taggttgcgg gctattgatg tatagcctgg gtgatggcgc gaaaaacgcc agagaagcga
     1741 tttatcacat tgaaggtgac ccggatcatc cggtaagccg tggtgcgctg tgcccaaaag
     1801 gggccggttt gctggattac gtcaacagcg aaaaccgtct gcgctacccg gaatatcgtg
     1861 cgccaggttc tgacaaatgg cagcgcatta gctgggaaga agcattctcc cgtattgcaa
     1921 agctgatgaa agctgaccgt gacgctaact ttattgaaaa gaacgagcag ggcgtaacgg
     1981 taaaccgttg gctttctacc ggtatgctgt gtgcctccgg tgccagcaac gaaaccggga
     2041 tgctgacaca gaaatttgcc cgctccctcg ggatgctggc ggtagacaac caggcgcgcg
     2101 tctgacacgg accaacggta gcaagtcttg ctccaacatt tggtcgcggt gcgatgacca
     2161 accactgggt ggatatcaaa aacgctaacg tcgtaatggt aatgggcggt aacgctgctg
     2221 aagcgcatcc cgtcggtttc cgctgggcga tggaagcgaa aaacaacaac gatgcaacct
     2281 tgatcgctgt cgatcctcgt tttacgcgta ccgcttctgt ggcggatatt tacgcaccta
     2341 ttcgttccgg tacggacatt acgttcctgt ctggcgtttt gcgctacctg atcgaaaaca
     2401 acaaaatcaa cgccgaatac gttaaacatt acaccaacgc cagcctgctg gtgcgtgatg
     2461 attttgcttt cgaagacggc ctgttcagcg gctacgacgc tgaaaaacgc cagtatgata
     2521 agtcgtcctg gaactatcag ttcgatgaaa acggctatgc aaaacgcgat gaaacactga
     2581 ctcatccgcg ctgtgtgtgg aacctgctga aagcgcacgt ttcccgctac acgccggacg
     2641 tcgttgaaaa catctgcggt acgccaaaag ccgacttcct gaaagtgtgt gaagtgctgg
     2701 cctccaccag cgcaccggat cgcacaacca ccttcctgta cgcgctgggc tggacgcagc
     2761 acaccgtggg tgcgcagaac atccgtacta tggcgatgat ccagttgctg ctcggtaaca
     2821 tgggtatggc cggtggcggc gtgaacgcat tgcgtggtca ctccaacatt caggggctga
     2881 ctgacttagg tctgctctct accagcctgc caggttatct gacgcttccg tcagaaaaac
     2941 aggttgattt gcagtcgtat ctggaagcga acacgccgaa agcgacgctg gctggtcagg
     3001 tgaactactg gagcaactat ccgaagttct tcgttagcct gatgaaatct ttctatggcg
     3061 atgccgcgca gaaagagaac aactggggct atgactggct gccgaagtgg gaccagacct
     3121 acgacgtcat caagtatttc aacatgatgg acgaaggcaa agtcaccggt tatttctgcc
     3181 agggctttaa cccggttgcg tccttcccgg acaaaaacaa agtggtgagc tgcctgagca
     3241 agctgaagta catggtggtt atcgatccgc tggtgactga aacctctacc ttctggcaga
     3301 accacggcga gtcgaacgat gtcgatccgg cgtctattca gactgaagta ttccgtctgc
     3361 cttcgacctg ctttgccgaa gaagatggtt ctatcgctaa ctccggtcgc tggttgcagt
     3421 ggcactggaa aggtcaggac gcgccgggcg aagcgcgtaa cgacggcgaa attctggcgg
     3481 gtatctacca tcatctgcgc gagctgtacc aggccgaagg tggtaaaggc gtagaaccgc
     3541 tgatgaagat gagctggaac tacaagcagc cgcacgaacc gcaatctgac gaagtggcta
     3601 aagagaacaa cggctacgcg ctggaagatc tctatgacgc taatggcgtg cttattgcga
     3661 agaaaggtca gttgctgagt agctttgcgc atctgcgtga tgacggtaca accgcatctt
     3721 cttgctggat ctacaccggt agctggacag agcagggcaa ccagatggct aaccgcgata
     3781 actccgaccc gtccggtctg gggaatacgc tgggatgggc ctgggcgtgg ccgctcaacc
     3841 gtcgcgtgct gtacaaccgt gcttcggcgg atatcaacgg taaaccgtgg gatccgaaac
     3901 ggatgctgat ccagtggaac ggcagcaagt ggacgggtaa cgatattcct gacttcggca
     3961 atgccgcacc gggtacgcca accgggccgt ttatcatgca gccggaaggg atgggacgcc
     4021 tgtttgccat caacaaaatg gcggaaggtc cgttcccgga acactacgag ccgattgaaa
     4081 cgccgctggg cactaacccg ctgcatccga acgtggtgtc taacccggtt gttcgtctgt
     4141 atgaacaaga cgcgctgcgg atgggtaaaa aagagcagtt cccgtatgtg ggtacgacct
     4201 atcgtctgac cgagcacttc cacacctgga ccaagcacgc attgctcaac gcaattgctc
     4261 agccggaaca gtttgtggaa atcagcgaaa cgctggcggc ggcgaaaggc attaataatg
     4321 gcgagcgtgt cactgtctcc agcaagcgtg gctttatccg cgcggtggct gtggtaacgc
     4381 gtcgtctgaa accgctgaat gtaaatggtc agcaggttga aacggtgggt attccaatcc
     4441 actggggctt tgagggtgtc gcgcgtaaag gttatatcgc taacactctg acgccgaatg
     4501 tcggtgatgc aaactcgcaa acgccggaat ataaagcgtt cttagtcaac atcgagaagg
     4561 cgtaaggggg cgaacagatg gctatggaaa cgcaggacat tatcaaaagg tccgcaacta
     4621 actccatcac gccgccttct caggtgcgtg attacaaagc agaagtcgca aaacttatcg
     4681 acgtttccac ctgtatcggc tgtaaagcct gtcaggtggc gtgttcggag tggaacgaca
     4741 tccgtgatga agtggggcac tgcgtcgggg tttacgataa ccccgccgat ctgagcgcca
     4801 agtcctggac ggtgatgcgc tttagcgaaa ccgaacagaa cggcaagctg gagtggctga
     4861 tccgtaaaga cggctgtatg cactgtgaag ctcccggctg cctgaaggcg tgcccgtctg
     4921 ctggtgcaat cattcagtac gctaacggga ttgtcgattt ccagtcggaa aactgcatcg
     4981 gctgtggtta ctgcattgcc gggtgtccgt ttaatattcc gcgcctcaac aaagaggata
     5041 accgggtata taaatgcacg ctctgcgtcg atcgcgtcag cgtcggccag gaaccggctt
     5101 gtgtgaaaac ctgtccgacc ggggctatcc acttcggcac caagaaggag atgctggagc
     5161 tggcggaaca gcgcgtggcg aaactgaaag cgcgtggtta cgaacatgct ggcgtctaca
     5221 acccggaagg ggtcggtggt acgcacgtta tgtacgtgct gcatcacgcc gatcagccgg
     5281 agctgtatca cggtctgccg aaagatccga agatcgacac ctcggtaagc ctgtggaaag
     5341 gcgcgttgaa accgctggca gcggctggct ttattgccac ttttgccggg ttgattttcc
     5401 actacatcgg tattggcccg aataaggaag tggacgatga cgaggaggat catcatgagt
     5461 aagtcgaaaa tgattgtgcg caccaaattt attgatcgcg tctgtcactg gaccgtggtg
     5521 atttgcttct tcctggtggc gctgtccggg atttcgttct tcttcccgac gctgcaatgg
     5581 ctgacgcaaa ccttcggtac gccgcagatg ggacgcattt tgcacccgtt cttcggcatt
     5641 gcgattttcg tcgcgctgat gtttatgttt gtgcgttttg tgcatcacaa catcccggat
     5701 aagaaagata ttccgtggct attgaacatt gtcgaagtat taaaaggcaa tgagcacaaa
     5761 gtggcggatg ttggtaagta caacgccggg caaaagatga tgttctggtc gatcatgagc
     5821 atgattttcg tgctgttggt gaccggggtg attatctggc gtccgtactt tgcgcagtac
     5881 ttcccgatgc aggttgttcg ctacagcctg ctgatccacg cggctgccgg tatcatcctg
     5941 atccacgcca tcctgatcca tatgtatatg gcattctggg tgaaaggatc gattaaaggg
     6001 atgatcgaag ggaaggtaag ccgtcgctgg gcgaagaaac accatccgcg ctggtatcgt
     6061 gaaatcgaga aggcagaagc gaaaaaagag agtgaagaag ggatataatc tcttttgaac
     6121 tttaagctga aaatggcgct ttaagaagcg ccattttttt attgcgtaac cagacggcgc
     6181 agtcgcgaca catccaccgt tttttcagcc tctgccagac tccaggcgtt ttgcagattc
     6241 agccacattt gcggcgaact gccgatcacc acggaaagtt taattgccat ttctggcgtc
     6301 aaagctgctt ttccggtcag caatcggctt gccgttgagg gcgcaatttc cattgctctg
     6361 gcaaactcgc gcaggctgac attaagttcg tccagtgatt cctgaataat gtcccccggg
     6421 cggggatgat tggccatttt cattagtgtc tttactctca gtagcgttcc ttctctggga
     6481 acactatcat tattgttcct tcctacgcaa caataatcca tttagccatt tcatgttgga
     6541 gagtgtgcga tgctgcgacc cgaacatggg agtcgcagca aagacctctt agtgacggaa
     6601 atcaatcacc atacggccac ggattttgcc ttcttccatc tcggtaaaga tggtgttgat
     6661 gtccgctaac ggacgcaggg cgactttcgg caccactttg ccttcggcgg caaactggaa
     6721 ggcttcggtt agatcctggc gcgtgccgac cagcgaaccg accacttcaa tgccatccag
     6781 cacaagacgt gggatatcca ggctcataga ctccggcggc agaccgacag ccacaacacg
     6841 accgcctgca cggacagcat caactgccga gttaaacgca gctttagcta ctgctgttac
     6901 caccgcagcg tgagcgccac cggttttctc ctgcacaatt taggcggcgt cttcggtgcg
     6961 tgagttaatc gctaaatctg cacccatttc ggttgccagt tttaactgct catcattgac
     7021 atcaatggcg atcactttgg cgttaaagac attcttcgcg tattgcaggg cgaggttacc
     7081 cagaccgcca agaccgtaga tagcaatcca ctgaccggga cgaatttttg acagtttaac
     7141 ggctttgtag gtggtgaccc ccgcacaggt aatgctgctg gccgccgccg agtccagacc
     7201 atctggcact tttaccgcgt aatcggcgac cacgatgcac tcttccgcca tcccgccatc
     7261 aacgctgtat ccggcatttt taactgaacg gcagagcgtt tcgttaccac tgttacagta
     7321 ttcgcaatga ccgcatcctt cgtaaaacca cgccacgctg gcacgatcgc ctggttttaa
     7381 tgaggtgaca cctgggccaa cttctgccac cacaccgatg ccttcatggc ccagaattac
     7441 cccagttttg tcaccaaaat cgccattctt aacatgaaga tcggtatgac atacaccaca
     7501 acactccatt ttcagcaggg cttcgccatg tttcagtgag cgcagtgttt tatccgtaac
     7561 gtcaacatga tgatccttcg taacaactgc agccttcata gttcctcctt ttcggatgat
     7621 gttctgcata gcaggtgagg caaatgagat ttattcgcca ctacccagta tggatgagat
     7681 ctgaaaaagg gagagggaaa tagcccggta gccttcacta ccgggcgcag gcttagatgg
     7741 aggtacggcg gtagtcgcgg tattcggctt gccagaaatt atcgtcaatg gcttgttgca
     7801 aagcttcagc agacgttttc accgccacgc cttgctgctg cgccattttg ccaaccgcaa
     7861 acgcaattgc gcgggagact ttctgaatat ctttcagttc cggtagtacc agaccttcgc
     7921 cgttcagcac cagcggcgaa tactgagcaa gcgtttcact tgctgacatc agcatctcat
     7981 cggtgatacg tgacgcgccg gaagcaataa cacccagccc gatgccaggg aaaataaagg
     8041 cgttgttaca ctgggcgata gggtagattt tatctttcca taccactgga ttaaacgggc
     8101 tgccagtggc gaccagcgcg ttaccttcgg tccaggcgat aatgtcctgc ggtgtggctt
     8161 ccacgcgtga cgtcgggtta gacagcggca tcacgatcgg acgcggacag tgtttatgca
     8221 tctcacggat gatctcttcc gtaaacagcc cggtctgtcc tgagacgcca atcagaatat
     8281 ctggttttac attgcgcacc acatccagca gtgacagcac atcgctgtcg gtatcccagt
     8341 cactgaggtt ttcgcgtttc tgcaccagtt tggtctggaa aggcagcagg ttcggcatct
     8401 tgtccgtcag caggccaaag cgatcgacca taaagacttt ctgccgcgcc gcttcctcgc
     8461 ttaatccttc gcgctgggtc tgggcgatga tcatttcggc aatgccgcat cccgctgaac
     8521 ctgcaccaag gaagacgatt tttttctcgc ttaactgacc acctgccgct cggcttgctg
     8581 cgatcagtgt gccgactgtt accgccgcag tgccctgaat gtcatcgtta aaagaacaaa
     8641 tttcattgcg atagcggtta agtaacggca tcgcattttt ttgagcaaag tcttcaaact
     8701 gcaacagcac gtctggccag cgttgtttca cagcctggat aaattcatca acgaattcat
     8761 agtattcgtc gtcaatgata cgcggattac gccagcccat atacagcgga tcgttaagca
     8821 gctgttggtt gttcgttccg acatccagca ccaccggaag ggtatacgcc gggctgatgc
     8881 cgccacaggc ggtatagagc gacagtttac cgatcggaat gcccatcccg ccgatgccct
     8941 ggtcaccaag ccccagaata cgttcaccgt cagtcaccac aatcactttg atattatggt
     9001 tcggtacgtt ttgcagaata tcgtccatat tgtggcggtt ctggtaagag ataaacacgc
     9061 cgcgtgaacg gcggtagatc tcagaaaaac gctcacaggc tgcgccgacg gttggggtat
     9121 aaataacagg catcatctca tcaagatgat tgtttaccag acggtagaag agggtttcgt
     9181 tggtgtcctg gatgttacgc aggtagatgt gtttgtcgat ttcggttttg aatccctgat
     9241 actggatcca tgctcgttcc gcttgttctt cgatggtttc gaccacttcc ggcagtaacc
     9301 ccagcaggtt gaagttacgg cgttcttcca tgctgaaggc actgccttta ttcaacaacg
     9361 gaaattccag cagtacaggg ccagcgtaag ggatataaag cgaacgctgt ttttttgttt
     9421 ttggttccat gtcactcact cttttttgaa tatccatccc tggcacgctt ttatcgtctt
     9481 tgctttaccg ccagggcgtc ggccccaagt ataaagcaga taaaaacaaa aacaccattg
     9541 cgcaggcaat ggtgtttaat cgtcattgag gactgatggt tatgaattac ttttcagcgg
     9601 ggcgttttct gccggttggg ttatttacca cgctggattt gtcaccttcg gtaactattt
     9661 tgcgctggtt agaaatttta tggtccagtc caagaatatg acgtgcctga cggttcgatt
     9721 tcattttaac tcctcaatcc tgttgctagt tttaaggaca acatcgccgt agcgaagaaa
     9781 cacgtgctaa acccctaaat taggttgccg atcaagcata gcaccttaaa gcgtagggtg
     9841 ctggccactg accacataat tgatcgtttg ctggtagata tcactgagga tgtcgttatc
     9901 agaagcttcc acccatttgg tcagctccat gagaatgtca tcttcagtga caacaccgtg
     9961 ctctgcccga aggccttgct caatggcatt aaccagagcg ggttctgctg ttgaattttc
    10021 tgcctgataa taagtaaaca tagtgattct ccgtgtctgt gtatttatgg tgtctgctac
    10081 ggatcgcaga tttataaagc acattcagca tggcaaatat ttgccgcttt gttgttaaga
    10141 ttagtcctgg ttgatgattt ttatatttta acctcatgat attgataggt attattattg
    10201 tggtgagttg attaatatta atgcaatatc tcttgggtta tatattcccg gttatctatt
    10261 gtggaaattt aatttaagtg cagaagtaat atttctgccg gatttttatt cggaatatcc
    10321 tgcttatcct cgtgctgttt ctcacgtagt ctataatttc ctttttaagc ccacatgaga
    10381 gcaacaatga caatccataa gaaaggtcag gcacactggg aaggcgatat caaacgcggg
    10441 aagggaacag tatccaccga gagtggcgtg ctgaaccaac agccgtatgg atttaacacg
    10501 cgttttgaag gcgaaaaagg aactaaccct gaagaactga ttggcgcagc gcatgccgca
    10561 tgtttctcaa tggcgctttc attcatgctg ggggaagcgg gatttacgcc aacatcgatt
    10621 gataccatcg ccgatgtgtc gctggataaa gtggatgccg gttttgcgat tacgaaaatc
    10681 gcactgaaga gtgaagttgc ggtgccgggt attgatgcct ctacctttga cggcatcatc
    10741 cagaaagcaa aagcaggatg cccggtctct caggtactga aagcggaaat tacgctggat
    10801 taccagttga aatcgtaaag cattgccgga tgacgtgtca ggcgcgtgaa tgcctgatgc
    10861 gttgttagca tctctacagc gcccgccagc accggagctc acgtccgtcc tcccttattg
    10921 ctaatgattg ccggacttca catccgctgg ttgcaagggg gcaacgttcg tagaaaaaac
    10981 agccttgcgg caacgtgcgg tttcccggca gatccgtttt acgtaatgcc cattcttcct
    11041 ccagcggttt atcaatggcg gggagggaat ccagcaataa tcgggtgtat ggatgtgccg
    11101 gagccgttag cacctgttgc gcgtcgccca gttctacaat ctgcccgaga tacatcaccg
    11161 ccacccgatc gctcatatga cgtatcaccg agacattgtg tgaaatcagc acataggtca
    11221 gcccgtgatt ttcctgtagc gttaccagta aattgaggat ctgcgcctgc acggagatat
    11281 ccagcgcaga ggttggctca tcaagcacaa tcacgtcagg ctgcgaagag agtgctctgg
    11341 caatggcgat acgttgccgc tgcccgccgg agaacgcatg aggcaggcgg tcgagatact
    11401 ccggacgaat acccacctgc acagccagct cctctaccaa cgctcgccgc tgttgttcac
    11461 tactacgctt agctatccag agcggttctg tgatgatgcg ccacaccggt aagcgcggat
    11521 tgagcgaaga gagcgggtcc tgaaacacca tctgcataat gcgttgtgag ccagaacgga
    11581 tgtactgccc gtggctcggt tgcagcatac ccattaaaag ctgtgcgagg gtgcttttgc
    11641 cgcagcctga ctcgccgacg atccctaagg tttcaccacg gcggatctgt aaatcaatac
    11701 cattaatcgc atgaacatgt tccgtagttt taccaagcca gtttttacgg gccgggaaat
    11761 tgatatggac gccgcgtaac gttaataacg tgtcagacac ttatgacctc ctgctgcgga
    11821 taccaacagg cgcagcgctg gttgttgtca ccacacgctg tcagcgccgg gacgttttca
    11881 cactgtgcac ctgccgcata gcaacgatcg cgaaaagcgc agccgtcagg caaatgggtg
    11941 aggtttggta ccgtccctgg aatggcgggt aatagctggc gtggtactcc atgttctggt
    12001 gcacattgga gcaaaccaat ggtatacgga tgccggggat gatggataac gtctgccctc
    12061 acgccgcttt caattacgct tccggcatac atcacgtaaa cgctatcgca cagttgcgac
    12121 accacggcca tatcatggct gatgaacaga accgcagttc cactggcgcg ggctttatgt
    12181 ttaagcaaac gcagtacctg caactgcacc gtgacgtcca gcgccgtagt cggttcgtcg
    12241 gcaataatca attgcggctc gcaggagaat gccagcgcaa tcattacccg ctggcgcata
    12301 ccacctgaaa gctcaaacgg atagcgcgac ataacttcca cggcatccgg gatttgcatc
    12361 tcttccagca ggacaatcgc tttagctctg gcttcccgac gacttattgg ttgatgatgg
    12421 cggatcacgt ccatcatctg aagacctatt cgacgtgtcg gattgagggc ggtcatcggt
    12481 tcctgaaaga tcatcgccac tcgtgcgccg cgccactgac gaagctgttt ttcccgagcg
    12541 ttaagaacat cgtctcccag cagtgaaatc tgcccccgat gtacgcaata actgcccgtc
    12601 ggtagcagac gcataatcag cattgcggtg actgatttac ctgagccgga ttctcccacc
    12661 agaccgacaa tttcaccgcg gttaatctgc aaggacacat tgttgagcgc gtgaacatca
    12721 ccgttaaaac cggggaaact caaatgcagc tgttgaatgt ccagaacggg ctgggtcatg
    12781 actgctttcc tcctgctttc gggtcaagca gatcgcgaat accatcacca aagagattaa
    12841 acccaacggc ggtaagcaaa atcgctgccc ttggaaatgc gcaataccac cactgatcga
    12901 gtacatagtt gcgaccattc gctaccatcg cgccccattc agcactcggt tgttgagcac
    12961 ccaggccaat aaatcccaac gtggcggcca ttaaaatcgc gctaccgata tccagcgatg
    13021 cctgcacgat cagcggcggc agggagttac gtaaaatatg ccagctgatc agatgccaac
    13081 gcgacgcacc aaaggttttc gccgcctgaa cataggtata ctggcgtaca actaatgctt
    13141 gcccccgcgc caggcgcaca taaaagggaa ttcgcacaat agcaatcgcc agcatggcgt
    13201 taaataaact cggcccgaga gcggcagcca gtgccattgt cagtaccaac gaaggaatcg
    13261 acagcataat gtccatgatg cgcatgatga tggcgtctgc gcgtccgcca agcacaccgg
    13321 atagacatcc gagtagcgaa ccaatcatac ccgcaatggc aaccacgact aatccggcga
    13381 gaattgattg ctgactgccg accagtacgc ggctgaacag atcgcgtccc acttcatcgg
    13441 tgccaaacca gtgcgccgca gaaggcggca aaaggcgggc ggttaaatca atggcgttgg
    13501 gatcatgcgt cgcaagccac ggtgaaaaaa acatcatcaa tagcattaat acaatgatga
    13561 ctgcgccggt cacggtgagc ggactgcctt tcagcatcca taccagtttt gcaccgttaa
    13621 atcgcgtttg tttttgtggg cgtacggcgg acgtttcctc gcttagcatc attcaccacc
    13681 tccacgtccg atacgcggat caatccacaa atagagcaaa tccaccacca ggttgaccag
    13741 cacataagca aatgaaacca cgacggcaaa gcccatcact gccgggaagt cgagcgcctg
    13801 tattgatgtt actacccatg cacccattcc gggccaggca aaaacggttt cggtgagcac
    13861 tgcgccatac aacaaatcgc ccagcgccag acccaatacg gtaatcgatg ggatcaacgc
    13921 attgggtagc gcataacata aaacgatata ccagccgggc aagccgctgg cccgggcggt
    13981 acgaatgtag tcttcactca attgttccag catcgctgag cggatctggc gagcgacaat
    14041 tcccaggtga acgaacgcca gcgttaatgc cggtaagatg agatgttgca acgcattgaa
    14101 gaagacttca ccgttgcctt caagcagcgc atcgagcaga taaaagccgg taacgtgcgt
    14161 tggtggatcc agccagtcat caagccttcc gccgccggga agaatttgca gatgaccata
    14221 aaacagcaca atgacgccca gtccaagcca aaacgcaggt gtggagattc cggtaatggc
    14281 cattattcgc accagatgat ccagccagcg atttcgccag actgcagaga gtatgcccag
    14341 cgggatgcca atcaggagtg ccagcagcag ggcacaaaaa gccagttcca gcgtcgccgg
    14401 gaaaaatata cgcaactctt ccaacaccgg acgcccggta cgaatggatg ttcccaggtc
    14461 accatgaaac aggtcgctga cgtagcggta aaactgtaca tacagtggct ggtccagtcc
    14521 cagttgctgg cgaatatttt ccacgatagc atcgctggcg cggtcacccg ccagtaaccg
    14581 cgccggatcg ccagggatca gatgcgagat aataaacgta atcacgcaga cgcccgccat
    14641 cacgagcacc agcccccagc agcgttggcg taaaatactc cagaaggtca cgttatttac
    14701 tcatggtatt gatattgaag acctgttcca gcatgggatt gaacacaaag cctttcacct
    14761 ctttgttcat cgccagttgg tagtttttct ggaacaggta cacataagca gcgtcatcaa
    14821 tgacgatttt ctgtgcctgc tggtagtccc gggtacgctg cgtctggtcg gtggtcgcaa
    14881 gcgcattgcg cagtaactta tcgacctcac tgttttcata gaacgagcgg ttacccggca
    14941 gacctttttt gtctgactca aaccagtaat tcataaacat atacgggtcg gcaaaatccg
    15001 gactccagtt gccaatcgca atgtcgtaat cacctttacc cactctgtcg cgcatggtgg
    15061 cgttcgccag cttttccagc ttcacattga tgcccagctt gttgagactg gattgtgtcg
    15121 ccagagcaat aggctcccag ttcggatcct tatcggagta gagaaacgtc aggctggtgg
    15181 gtttgctcgt cactttatcc cattcggctt tggctttcgt ttcgtcatgg ttgtattgca
    15241 ttgccgtcgc atcgtagccc cacatgcctt ccggaatcgg gccgcgcatc tgttttccgt
    15301 taccactcag aatgccgtta accatgccct gataatcggt agaccaggaa atggcccgac
    15361 gcagatccgc ctgattaaga ggcgctttgc tgttattcag atacaggtag gtgacgcgca
    15421 gtgacggata ctctgccaca ttgactttgt tttcctgctt cagggcgttg agttgatcca
    15481 ccggcagcgc atcggcaatg tcaatatcac cacgggagag ctgcaggcga cgggaggcac
    15541 tttcaccaat aatttttacc gatactcgct taaagttcgg tttattgcca gggtaatgcg
    15601 gatttggcac cagaactaat tgctgacctt tttgccagct tttcagcata aatggtccgg
    15661 aaccggcggt attttgcgcg aggaagccgc gggcatcatc cgctgcatgt tcctttaaca
    15721 ccgccggatt gataatggat gcaccgtcat tcgccagcgt gtagaggaac ggtgcgaatg
    15781 gctggctaag ggtaaacttc accgtatgtt cgtcgggagc atcaatcttt aaatctttgg
    15841 gaaatgcttc tgctggcccc tggccgattt ttagtagccg ctcaaaagag agttttactg
    15901 cttcggcagt gaccggtgtg ccatcggcaa atttagcatt gtccttcagg gtgaacgtcc
    15961 actctttttg atcgtcagac gctttccagc tacttgccag atcgccttca acgtcggttg
    16021 agcctttatc accgtccgtt ttgtactgaa ccagccgctg ataagacggg taggtcaccg
    16081 tccagtcgtt attatctatt gttaccgccg gggcgagggt ttgtggatcg gcggccttac
    16141 caatcaccag catatctttc ggtacggcgg cgtgcgcaac cgggaaagtt gtggcaagga
    16201 cgagcgcgag caatgtagga cgaaacggta tcgatctctt catgacagtt tcctgattaa
    16261 ctgacgtgct gtgtgccagg ggatataaaa caggtgaatt gatcagcgag cagtgggtaa
    16321 ctcgctgcct ggggtaattc gaagtgccac cattcgctgg agataccgac aaaaccgcca
    16381 ccagtcataa tcgcattcag caacagccga ttgcgctgag cggcgggcgg gacggaaggg
    16441 tgataggcat gggagcgctc gtgcatttca tcgaaccctg cgcccatatc gaggatgttc
    16501 ccgtgctcat cacgaagcgt caggtcgatc gccgtgccac ggctgtgatt agaaccgacc
    16561 gtcacatcaa caacatattg cgggtctggg caggcttgcc acaacatcgc ctgtgcttgt
    16621 tgtgggcgat acgcatcgta aatcaccagt tgtaagcctg acagctgggc gatactgata
    16681 cttttcgcca gcgcggtaat cgcatccttg tgtagcagac aacgcgcttg ctgataaata
    16741 gctttacctg tgatgttatc agcgcaggcg tatttcaatt cgatctccag atcagggaag
    16801 attacggcta aatcaaccag ttcggtggta tccgacataa acggttcctg tataagacaa
    16861 aaattgctgc gctttccgct tatgcagatc tcatgccatg ccgggataag cgccagaatg
    16921 ctggcttaaa gttatatttt ttaacttttg atcaacattt gtgcagcgta gtgcagtttt
    16981 ggtgcaagag gggaagttaa ggaaggaatc tcccggaatc gtagatgaaa tcacagtatt
    17041 taagtgacgg tgtcacgtta aatgaaaacc cgcgagtgcg ggcgagagga atttgtcaga
    17101 ttttcagcgg taacacgctg ctcatccagc ctggaatttc ttcggcgggt agggggcggg
    17161 aaaagaaata tccctgaata acgcgacagt ggatcttgcg tagcatctca aattgctctt
    17221 tggtttcgac gccttccgcc acgacggtta aattgaggct ttgcccaatg ctggtaatgg
    17281 cttcaagtaa ggcaaggatg cgtttttcgg tcagacaacg atcgacaaaa cttttgtcaa
    17341 ttttgatttc cgttaccgga agactgacta agcgggataa tccggaaaag cccgtaccaa
    17401 aatcatctac cgataagccc acgcccatat cacgcaggat ctgaatgcgc ttaaagattt
    17461 cggtatcgtg ttccatcatc atgctttccg tgatttctac cgtcagctgg tggccgtcaa
    17521 taccccaggc gtgcattgca tcagacacct gattaggcag ttgattactg cgaaagtgca
    17581 gtgccgacaa gttaacggaa agcgccggga tatgaatatt ctggctacgc cattctgcta
    17641 actgacggca agcttccgcg atgacccagc gcccaatatt ttcgatttca ccaatctctt
    17701 ctgcgagagg aataaaccgt gaagggggca catgaccatg ctggggatcg tgccagcgcg
    17761 caagggcttc gatgccgtac agttcacccg tttctgcgaa gatttgcggc tggtaaacaa
    17821 gtttcagttg gttattgcta atcgcttctt tcagcgctgc gcctaaaacc aaacgctctt
    17881 ttaccatttc gttcatcgcc gggctgaaga actgccagcc gttaccgcca ttcttgcgaa
    17941 tataatctat tgcattgtga gcagtggaga gtaggtaatc gtggttttta cccacgtcgt
    18001 agctgatgcc aatactcaag gtaagcggga atggtttatc gtcaatcatt atcggcttgc
    18061 tgaccacatt ccgtagctca tcggcgatct gggtaatgtt actgacgtcg ttttccaggc
    18121 tcacgaggac aaactgcgta ccttcgatac gacagagata ctgatccggt ttgagttttc
    18181 cacgaaagcg attgaccact tccagcaatg cctgatcggc ccacgcatag ccaaggctat
    18241 caatcacatc ctgaatatgg tcaacaccga tgagatacac caccggagag acggctttgt
    18301 cgaccaggtc atcgaggtaa ttgtgcaggt tattgcgatt tggcagaccg gtcatcggat
    18361 caaattggat gagttgttca atatgctggc ggcttttttc ctgttccagc gccagcgcgg
    18421 ccatatgctg actgatatct gccacgcgtt cgataaaggc gctggtttct gctcctgacg
    18481 aggttttaat ttgcaggatc cccgcaggcg cgccatcacg ctgacgaatg gtcgctgacc
    18541 agctttgcgc attttgaact tctgcaccgt gcgaagatga cgcccagtgt atcggcatcc
    18601 cgttgcgcag tgcgaacagc gaaacatgcg attcgttgag aacagattcg atgttacgac
    18661 aaatgatttc ccccatttca tgaaatggcg ggctgctgca catggcggcg agaatattgc
    18721 cttcaagctg gcggatttgc cgttcttcgg tgatatccga gaaagtcatt accaggttct
    18781 gcagatgcgc gagcacgtca taaaccgggc tgatagaggc tttaatccag attttttcac
    18841 cggtgcgcgt caacagcaga aattcgtcct gatcgcgggc ggttttccat agcaactgtt
    18901 gtaaacgaat gcggttatcg gcagggaatt caggaatgtt caggagtgta tcgggctgca
    18961 taccgctggc ttcgctaatg cagtaaccaa acatttcggt aaatgcgcga ttgcactgca
    19021 caatatggcg ttccggatcg aggacaatca ccggtcggtc gagatggtca acggcaataa
    19081 tcaattgtcg ggtctgttct ttttgcgcca tttctacgct ggcatcccgt accagcgcca
    19141 ggtaataaac tttcccctcg gcgctcactt tcgatagcgc aaaacgggtc cagattttac
    19201 tgccgtcttt tttctccagc tgcagctccc gactcatccc ctcgacgcgc gctttaccac
    19261 cttcacggtt atgacgaatg tattcaggat gcgcaggacg caaatcccgc ggaatcagca
    19321 tatcaatgtt attgccaatg acttcttcac gtttgtaccc ccagagcttc tctgcggcgg
    19381 ggttgaaaaa catcacttca tcattttcgt taattaacac cgcgcccatc atattttgtt
    19441 caagggcggg gaaaaaaatg ccatcggcgg cattttccgc atcggttagc ttcatgatta
    19501 cctctgcatc ctggcgcatc taaagactgg ctttccagag ttcaacacgg tttctacctc
    19561 gtcttttggc gatatacaga gcttcatcgg ctatttgaat gaggcgctca tagtcaggat
    19621 gaccattaaa catggcggca ccgatggaaa gtgagagggc aatatcctcg ccgtttgcgg
    19681 ctttcagttt ggttttctcc acccgactgc gaatacgttc tgcggtacgt aacgtttcgt
    19741 tttcagaagc ttcagtcaaa acaatgataa attcatcgcc cccgtagcga aaaacataat
    19801 cactactgcg gacgttgtca taaaaggcct gagagacttt acgcagaatt tcatcgccag
    19861 tgttatggcc ccacgtatcg ttgatctctt tgaatttatc aacgtcaata atcagcactg
    19921 acagcggtgt accggtccgg ttggcatggg caatttcgcg tttgaagata gtcggcagga
    19981 agcggcggtt aagtaatttc gtcagtacat ccataccgac ttcgtggcgc gatacttctt
    20041 caaacaattc acgcagcaag gtaataattt gcgatacagt atttcttatc tgtaataaaa
    20101 atttcacccg cagacttctg ttattcaaat tcctggtgtt acgcatggtt tgattgaata
    20161 taccgtcgaa atcctgaatc agacgggaga tatgcctact tcggcaatgc cactaaaata
    20221 atgtcgacct ttatggttaa accacaggcc aaaatcagcc tggcttaaag gcaaactact
    20281 gcctaaatca gaatccagca ggattttata gataatatct atttcccatg aaagtattga
    20341 ggctatttgc cgttcttttt cttcttcggc gttttctagt aacgagaaga tacgatagtt
    20401 ttcatcttcc tttgaggcac tactgtcact aaaggtaaac gcgcgggtca tcacttccat
    20461 agcgatatca atactgttaa tcgagaaatg gtagacctga agtttttctg cggcagaata
    20521 atccgaagag aagattaccg gatagaggat ttttttcagc acccgaaacc ccatctcgac
    20581 aatttctacc ggaattccta tgcgggcatg cacttccgcg acggtatgct ggatttgtat
    20641 tagcctttcg acatcgtcaa cctgggcaga aagcacgtta ataatccagc gttccatcgc
    20701 acttttcaac tgccgctcaa cttgttcatt actcaagaat tcttcggcat gcgggtcgat
    20761 gcggacaatt cgataaaact cgatactcag ataatgagca tgcgcaacgg caatttccgc
    20821 ggctttagca cgaatgagtg gatctgcccg ttcgacaagt ccggtccact catctttcat
    20881 tcttttaaaa tacatctcca taattcacac ccttataagg ctgggaaatc agacggaatc
    20941 aaaacgcaac gtgcgagatc gactaactgc accatattct cctgaaatat gaagatatac
    21001 tgaaaagaaa taagcgactt aggacagttt caatctacgc tactgttctt cagaagagta
    21061 tagcccatcg taattatttt tcggtgacag cgaatatcgt atggtttttc atattcatac
    21121 atttttatta gggatttata gctgtttaac taagtgtggt taattgcgtg gttaatttga
    21181 cttatgtaag catgattact agtgggatat ttcacaaggt gtaacaagcc ggtgggtaaa
    21241 gcaccggctt gttacaaagt aagcatggga gtttaactgc cccaacgact ttgcagatag
    21301 ctgaccgctt gttgagtctg cggtttattc agatagtcct cacggaacaa gatggtgccg
    21361 ctaatttctg gtaccgcatc gttaagatcg agctgctttt tcagttccgg tacgccgccg
    21421 ttaatcatcc agtctggctc tatctttgaa ggttcaccca ctttatagaa ggcgataccg
    21481 atatacaggc gggtcctggt cggtttaacg acatccgccc accattttgc caacacgtca
    21541 taacgcgcgg cactccgtga gaacggccag taaatttggg gagcaatgta atccagcaat
    21601 ccttgttcca cccatcgacg ggtgtcagcg taggattcgt cataggctgc cgcgcctcgg
    21661 gtatcggaac cgagcggatc gtgtgatcgg ttacgccaca cgcctgccgg gctaacgcca
    21721 aattcgactc ccggcttaat gcttttaatg gtgtgcgata cttttgtaat taactgctga
    21781 gtattgttgc gccgccagtc tgcttttgac gcaaatgcgc ctccgtattt acggtacgtt
    21841 tcgttatcat ttagccgtga acccggtgac tccgtataga aatagtcgtc aaactgcacg
    21901 ccatctaccg gatagcggga aaccacttcg gcgactattg atgtgatcca gtcctgaacc
    21961 tcagggatgc ccgggtcgag gacaaagcga tcgccagacg ttctgatcca gtcacggtgt
    22021 tgcacataga cgctcgccgg ttgttgagac agagtgctat tcagttccct gatagtaccg
    22081 ggcttcgtat taaccgatac gcgatagggg ttaaaccagg cgtgtacttt catcccacgc
    22141 ttgtgggctt cgtcgagcat aaattgcagc ggatcgtaac ccggattttc accaatctta
    22201 ccggtcataa gatcggacca cggcaaaatt tttgatggcc acagggcggt accgtccggc
    22261 ttgacctgga aaaagaccgt gtttataccg agacgttgca gatgatccag tttgtcgatc
    22321 atcgcctgtt gttgtacacg ggcccggctg gtggggttac taatgttaac cgaggaaacc
    22381 ggtggccagt cgaggcgaga caccgtggcc agccagatgc cacgcatcgg ttgtgacgat
    22441 tgttgcgtcg tggctggtgg ctttgaacct gctggtggtg tcaccatgga ctctggaggc
    22501 gtgcttttac aactacacag taaaagtgcc agtgcaacca gtatcgctgg tcttctaatc
    22561 gttaatttct tgtttcggga gcagatatcc atatgtgctg gtttccggta aacagatgtg
    22621 cgctcattct cgtacttatc ccggttaagt caatacgaca gcaagcacga aaaagggagc
    22681 gatgaattat cgctcccttg tcttataacc attcagacat ggttagtgtt tcttgtcatt
    22741 catcacaata tagtgtggtg aacgtgcacg cgggtgcagg aagaagtgac cttttggtgc
    22801 gttctgactg ttgattggct ccagagtgac gccggtattc gctttgcctt tacgatcatg
    22861 aacagcatag agaataaagg gcagggcaag taccaccagg aaactaacga ccagtaattc
    22921 aacatacata tcggtagagt caccctggat gttatccggc ggcaggaagg aaacaataaa
    22981 cgccataatt gaagtcagca gaccgacaat tgccacgacc agttttaccc ctttaccacc
    23041 agggatatta aatgtgcgtt ttaagtcagg atgtttaaga actaacacaa tgtagccaat
    23101 aaacagcatg aaataagcac acagataaat caccaccgtc agcgccagtg cgatcaggaa
    23161 ggacatgttg ttaccgccac cggtattggt gaggatgatc aacgcgatag aagtaatcac
    23221 cagctgcgaa atgaccagcg ttaccggtac gccatttttg ttcattttag cgaatgccgc
    23281 tggcagcagg tttttctgcg ctgtgacata catcccgcga gaaggaccaa caatccagga
    23341 ggcgatttcc gccagaacac ccagcaacag cagtgcggag atcacgcgaa ccgtccactc
    23401 aatttccggt gccacatggg acatcagaac ggtaaaggtt tgcattaccc ctgcggagag
    23461 gttgatttca ttacccggaa tgaccatcgc aatagataaa ccgccaacag agcttaagca
    23521 gattgccgcc accatcagca gtaacatagc cagtggatag tcgcgcccgg ggttgctcat
    23581 ttcattgacg tgagttgcgg aagcttctac gcccatataa ctcaaaatga aggcaacaaa
    23641 tacaaccagt gtgcccactt tagagaagtc agggaagaag gtcttcgaat ccatttcgat
    23701 agcaacgggg gcaccggagt gcagataaat agccgctaat gcgatcaaaa taaatgcagg
    23761 taacaggata ccggcgaaga agccaacttt agcaattcgc gccgtgtatt tcgtgccacc
    23821 aaactgcgtt aatgccagcg cccaaagaat gatgagtgct gcaatagttt tggtaatggg
    23881 gtcttcattc agcgctggcc atttcaggat gtaggagagt gcccctaaca cgaaatagag
    23941 catcggaata aaaccaatgg cgatttgcag atagccaaat gagatcgctg caaatcccca
    24001 tctcggcccc agagtatttg atacccaggc gaagacacca ccttcttccc agccgtcgac
    24061 ggtggccatt tccgcagcac aaagtcccac gggaataaac cataaaatcc cgcctaatag
    24121 caggaagaag actaatgaaa agcccgatgt tgcgaaggta gggtattcat aaacagccat
    24181 taccatcgat gccgttatgg caaagaatcc gagtaatgtg agctgcttag ctttacctgt
    24241 ctgtactgat gtagccatat tatcccccta aaacggtatt cctgtcggaa ccgcacctgt
    24301 tttgttctga agcgtattca gaacaatatt ttccgttgct aatgccagtg aacagacttt
    24361 ggaaattgtc ccgaaacggg ttcgtttcgg gacaccgtta ccgttaaacg ttatcaggta
    24421 tgtttaaagc tgttctgctg ggcaataccc tgcagtttcg ggtgatcgct gagatatttc
    24481 agggaggctt tgtagtcttc cagcaacagt tcagcaaagt ccatttcgaa gccgcgacga
    24541 cacataat
//
LOCUS       DADMIB010000051        24532 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.051, whole genome shotgun sequence.
ACCESSION   DADMIB010000051 DADMIB010000000
VERSION     DADMIB010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24532
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.051"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..453)
                     /locus_tag="JNZ89_001915"
     CDS             complement(<1..453)
                     /locus_tag="JNZ89_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001243518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniQ family protein"
                     /protein_id="HAY8935816.1"
                     /translation="MRNFPVPYSNELIYSTIARAGVYQGIVSPKQLLDEVYGNRKVVA
                     TLGLPSHLGVIARHLHQTGRYAVQQLIYEHTLFPLYAPFVGKERRDEAIRLMEYQAQG
                     AVHLMLGVAASRVKSDNRFRYCPDCVALQLNRYGEAFWQRDWYLPALPY"
     gene            complement(456..2123)
                     /locus_tag="JNZ89_001916"
     CDS             complement(456..2123)
                     /locus_tag="JNZ89_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY8935817.1"
                     /translation="MSATRIQAVYRDTGVEAYRDNPFIEALPPLQESVNSAASLKSSL
                     QLTSSDLQKSRVIRAHTICRIPDDYFQPLGTHLLLSERISVMIRGGYVGRNPKTGDLQ
                     KHLQNGYERVQTGELETFRFEEARSTAQSLLLIGCSGSGKTTSLHRILATYPQVIYHR
                     ELNVEQVVYLKIDCSHNGSLKEICLNFFRALDRALGSNYERRYGLKRHGIETMLALMS
                     QIANAHALGLLVIDEIQHLSRSRSGGSQEMLNFFVTMVNIIGVPVMLIGTPKAREIFE
                     ADLRSARRGAGFGAIFWDPIQQTQRGKPNQEWIAFTDNLWQLQLLQRKDALLSDEVRD
                     VWYELSQGVMDIVVKLFVLAQLRALALGNERITAGLLRQVYQDELKPVHPMLEALRSG
                     IPERIARYSDLVVPEIDKRLIQLQLDIAAIQEQTPEEKALQELDTEDQRHLYLMLKED
                     YDSSLLIPTIKKAFSQNPTMTRQKLLPLVLQWLMEGETVVSELEKPSKSKKVSAIKVV
                     KPSDWDSLPDTDLRYIYSQRQPEKTMHERLKGKGVIVDMASLFKQAG"
     gene            complement(2120..4228)
                     /locus_tag="JNZ89_001917"
     CDS             complement(2120..4228)
                     /locus_tag="JNZ89_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000267723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HAY8935818.1"
                     /translation="MWQINEVVLFDNDPYRILAIEDGQVVWMQISADKGVPQARAELL
                     LMQYLDEGRLVRTDDPYVHLDLEEPSVDSVSFQKREEDYRKILPIINSKDRFDPKVRS
                     ELVEHVVQEHKVTKATVYKLLRRYWQRGQTPNALIPDYKNSGAPGERRSATGTAKIGR
                     AREYGKGEGTKVTPEIERLFRLTIEKHLLNQKGTKTTVAYRRFVDLFAQYFPRIPQED
                     YPTLRQFRYFYDREYPKAQRLKSRVKAGVYKKDVRPLSSTATSQALGPGSRYEIDATI
                     ADIYLVDHHDRQKIIGRPTLYIVIDVFSRMITGFYIGFENPSYVVAMQAFVNACSDKT
                     AICAQHDIEISSSDWPCVGLPDVLLADRGELMSHQVEALVSSFNVRVESAPPRRGDAK
                     GIVESTFRTLQAEFKSFAPGIVEGSRIKSHGETDYRLDASLSVFEFTQIILRTILFRN
                     NHLVMDKYDRDADFPTDLPSIPVQLWQWGMQHRTGSLRAVEQEQLRVALLPRRKVSIS
                     SFGVNLWGLYYSGSEILREGWLQRSTDIARPQHLEAAYDPVLVDTIYLFPQVGSRVFW
                     RCNLTERSRQFKGLSFWEVWDIQAQEKHNKANAKQDELTKRRELEAFIQQTIQKANKL
                     TPSTTEPKSTRIKQIKTNKKEAVTSERKKRAEHLKPSSSGDEAKVIPFNAVEADDQED
                     YSLPTYVPELFQDPPEKDES"
     gene            complement(4215..5036)
                     /locus_tag="JNZ89_001918"
     CDS             complement(4215..5036)
                     /locus_tag="JNZ89_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HAY8935819.1"
                     /translation="MAKANSSFSEVQIARRIKEGRGQGHGKDYIPWLTVQEVPSSGRS
                     HRIYSHKTGRVHHLLSDLELAVFLSLEWESSVLDIREQFPLLPSDTRQIAIDSGIKHP
                     VIRGVDQVMSTDFLVDCKDGPFEQFAIQVKPAAALQDERTLEKLELERRYWQQKQIPW
                     FIFTDKEINPVVKENIEWLYSVKTEEVSAELLAQLSPLAHILQEKGDENIINVCKQVD
                     IAYDLELGKTLSEIRALTANGFIKFNIYKSFRANKCADLCISQVVNMEELRYVAN"
     gene            complement(5196..7025)
                     /gene="glmS"
                     /locus_tag="JNZ89_001919"
     CDS             complement(5196..7025)
                     /gene="glmS"
                     /locus_tag="JNZ89_001919"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HAY8935820.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIMVVHNGII
                     ENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTV
                     IMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
     gene            complement(7187..8557)
                     /gene="glmU"
                     /locus_tag="JNZ89_001920"
     CDS             complement(7187..8557)
                     /gene="glmU"
                     /locus_tag="JNZ89_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HAY8935821.1"
                     /translation="MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAAN
                     ELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATD
                     EQRQIQESNTGILISNGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQ
                     RLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDT
                     NVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDVNLAAACTIGPFARLRP
                     GAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWR
                     RPVKKK"
     gene            complement(8908..9327)
                     /gene="atpC"
                     /locus_tag="JNZ89_001921"
     CDS             complement(8908..9327)
                     /gene="atpC"
                     /locus_tag="JNZ89_001921"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HAY8935822.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQSGNVTVLADTAIRGQDLDEARAMEAKRKA
                     EEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM"
     gene            complement(9348..10730)
                     /gene="atpD"
                     /locus_tag="JNZ89_001922"
     CDS             complement(9348..10730)
                     /gene="atpD"
                     /locus_tag="JNZ89_001922"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HAY8935823.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     EEAVEKAKKL"
     gene            complement(10757..11620)
                     /gene="atpG"
                     /locus_tag="JNZ89_001923"
     CDS             complement(10757..11620)
                     /gene="atpG"
                     /locus_tag="JNZ89_001923"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HAY8935824.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLAHGNLEYKHLYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
                     MKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(11671..13212)
                     /gene="atpA"
                     /locus_tag="JNZ89_001924"
     CDS             complement(11671..13212)
                     /gene="atpA"
                     /locus_tag="JNZ89_001924"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HAY8935825.1"
                     /translation="MQLNSTEISELIKLRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(13225..13758)
                     /gene="atpH"
                     /locus_tag="JNZ89_001925"
     CDS             complement(13225..13758)
                     /gene="atpH"
                     /locus_tag="JNZ89_001925"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HAY8935826.1"
                     /translation="MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAV
                     SEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(13773..14243)
                     /gene="atpF"
                     /locus_tag="JNZ89_001926"
     CDS             complement(13773..14243)
                     /gene="atpF"
                     /locus_tag="JNZ89_001926"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HAY8935827.1"
                     /translation="MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(14305..14544)
                     /gene="atpE"
                     /locus_tag="JNZ89_001927"
     CDS             complement(14305..14544)
                     /gene="atpE"
                     /locus_tag="JNZ89_001927"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HAY8935828.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(14591..15406)
                     /gene="atpB"
                     /locus_tag="JNZ89_001928"
     CDS             complement(14591..15406)
                     /gene="atpB"
                     /locus_tag="JNZ89_001928"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HAY8935829.1"
                     /translation="MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINID
                     SMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFIL
                     ILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(15415..15795)
                     /gene="atpI"
                     /locus_tag="JNZ89_001929"
     CDS             complement(15415..15795)
                     /gene="atpI"
                     /locus_tag="JNZ89_001929"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HAY8935830.1"
                     /translation="MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGG
                     LAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
     gene            complement(16412..17035)
                     /gene="rsmG"
                     /locus_tag="JNZ89_001930"
     CDS             complement(16412..17035)
                     /gene="rsmG"
                     /locus_tag="JNZ89_001930"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HAY8935831.1"
                     /translation="MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV
                     RFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR
                     FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI"
     gene            complement(17099..18988)
                     /gene="mnmG"
                     /locus_tag="JNZ89_001931"
     CDS             complement(17099..18988)
                     /gene="mnmG"
                     /locus_tag="JNZ89_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HAY8935832.1"
                     /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRV
                     LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQ
                     HGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     IGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREAS
                     GEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(19367..19810)
                     /gene="mioC"
                     /locus_tag="JNZ89_001932"
     CDS             complement(19367..19810)
                     /gene="mioC"
                     /locus_tag="JNZ89_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HAY8935833.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDL
                     SASGIWLIISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAI
                     DKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWINLLK"
     gene            complement(19900..20358)
                     /gene="asnC"
                     /locus_tag="JNZ89_001933"
     CDS             complement(19900..20358)
                     /gene="asnC"
                     /locus_tag="JNZ89_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HAY8935834.1"
                     /translation="MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTT
                     GHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQHPIMRTIKP"
     gene            20510..21502
                     /gene="asnA"
                     /locus_tag="JNZ89_001934"
     CDS             20510..21502
                     /gene="asnA"
                     /locus_tag="JNZ89_001934"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HAY8935835.1"
                     /translation="MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPF
                     LPDQIHFVHSQELLSRYLDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDY
                     DDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLQL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL"
     gene            complement(21507..22958)
                     /gene="viaA"
                     /locus_tag="JNZ89_001935"
     CDS             complement(21507..22958)
                     /gene="viaA"
                     /locus_tag="JNZ89_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA stimulator ViaA"
                     /protein_id="HAY8935836.1"
                     /translation="MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKA
                     AITDDVPRWREALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRL
                     NSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQ
                     ERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQ
                     LGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITE
                     LEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGG
                     FNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGG
                     TDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVA
                     MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
     gene            complement(22952..24448)
                     /gene="ravA"
                     /locus_tag="JNZ89_001936"
     CDS             complement(22952..24448)
                     /gene="ravA"
                     /locus_tag="JNZ89_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA"
                     /protein_id="HAY8935837.1"
                     /translation="MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFL
                     LGPPGIAKSLIARRLKFAFQNARALEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTS
                     GYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEA
                     DSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKE
                     IGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVD
                     LILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKT
                     ALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLS
                     KGGEIRGKLNGIGFAQKLNLEVDSTQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQL
                     EELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC"
BASE COUNT         6076 a         6373 c         5834 g         6249 t
ORIGIN      
        1 atatggcaaa gcgggcaaat accaatctcg ttgccaaaag gcttccccat acctatttag
       61 ctgaagagca acgcaatcag ggcagtatct aaagcggtta tcgctcttaa ctctagaagc
      121 agcgactcct agcattaaat gcaccgcacc ttgcgcttgg tactccatta accgaatagc
      181 ttcgtctcgg cgctccttgc ctacaaacgg agcatataaa gggaataagg tatgctcata
      241 aataagctgc tgaacagcgt aacgtcctgt ttgatgtaga tgtcttgcta tcacacctaa
      301 atgcgagggc aggcctaagg tagcgaccac cttgcggttg ccatacacct catccaacag
      361 ctgcttagga ctaacaatcc cttgataaac gcctgcccgt gcaatagtgc tataaatcag
      421 ctcattcgag tacggaacag gaaagtttct catggctaac ctgcttgttt aaataagctc
      481 gccatatcca ctattacccc tttccctttt aaccgttcat gcatggtttt ttcaggttgg
      541 cgttgtgaat agatataacg taaatccgta tcaggcaagc tatcccagtc gctgggcttg
      601 actaccttta tagccgaaac ctttttactc ttggagggct tttctagttc tgacactacc
      661 gtttcgcctt ccatcaacca ctgcaaaaca agaggcagta acttttgtct tgtcatcgtt
      721 ggattctggc taaacgcttt tttaatagtg ggaattaaca ggcttgaatc gtaatcctct
      781 ttcagcatca gatataaatg acgctgatct tcggtatcta actcttgaag ggctttttct
      841 tctggtgttt gttcttgtat cgctgcgata tctagctgaa gttggattaa ccgtttatca
      901 atctcgggaa cgactagatc agaataacga gcaatgcgtt ctgggatacc cgagcgtaat
      961 gcctctagca tggggtgcac aggctttaac tcatcttgat acacttgccg caataaacca
     1021 gcggtaatac gctcattgcc taaagctagc gcacggagct gagcgagtac aaaaagtttt
     1081 actacaatgt ccatcactcc ttggcttagc tcataccaca catcacggac ctcatccgat
     1141 aacagcgcat ctttgcgttg taaaagctgt aattgccaaa gattatccgt aaaagcgatc
     1201 cactcttgat tgggctttcc acgttgcgtt tgttgtatag gatcccagaa tatagctcca
     1261 aaccctgccc ctctacgtgc agaccgcaaa tcagcctcaa aaatctctcg tgctttaggg
     1321 gtaccaatca acatcactgg tacgccaata atattcacca tcgtcacaaa aaagttcagc
     1381 atctcttgag atccacccga acgagagcgg cttaaatgct gaatttcatc aataaccaac
     1441 aaccctaaag catgtgcatt ggctatttgc gacatcaaag ccaacatggt ttctatacca
     1501 tgacgtttta agccataacg acgctcatag ttcgagccca aggctcgatc caacgctctg
     1561 aaaaaattca agcagatttc ttttagcgaa ccattatgcg agcagtctat tttcaaatac
     1621 accacctgct ctacattgag ttcacgatgg taaatcacct gaggatacgt ggctagaata
     1681 cgatgaagag aggtcgtctt cccactacca gaacaaccaa ttaacaataa gctttgtgcc
     1741 gtagatcgtg cctcctcaaa gcgaaatgtc tccaactctc ccgtttgaac acgctcataa
     1801 ccattttgta aatgcttttg taaatctcct gttttaggat ttctgcctac gtagccacct
     1861 cgaatcatga ccgaaatacg ctcacttagt agcaaatgcg tacctaatgg ctgaaaatag
     1921 tcatctggaa tacgacaaat ggtatgagct ctgataacac gggacttttg caagtcagag
     1981 gaagtaagct gtaaagagga tttcagtgat gcagcactat tcactgactc ttgtaatggt
     2041 ggtaaggcct cgataaaagg attatcacga taagcctcta cccccgtatc acgataaact
     2101 gcttgaatcc gggtagcact catgactcat ccttttctgg tggatcctga aataattcag
     2161 gcacgtatgt gggtaggctg taatcttctt gatcatccgc ttccactgcg ttgaaaggaa
     2221 taactttagc ctcatcacct gaagagcttg gcttcaaatg ctccgcacgt tttttacgct
     2281 ccgaggtcac ggcttctttt ttattagttt taatctgctt aatgcgtgtt gatttgggct
     2341 cagtagtact gggcgttaac ttattcgctt tctgaatggt ttgctgaata aacgcctcaa
     2401 gctccctgcg tttagttaac tcatcctgct tcgcattggc tttattgtgt ttttcttgtg
     2461 cttgtatatc ccaaacctcc caaaatgaga gacctttaaa ctgccgacta cgttccgtca
     2521 gattacagcg ccaaaataca cggctgccaa cttgcggaaa caaataaatc gtatcaacca
     2581 gcactgggtc ataagccgct tctaaatgtt gaggtctagc tatatcagtg ctccgctgca
     2641 accaaccctc acgcagaatc tctgaccccg agtaatacaa accccacaaa ttaacgccaa
     2701 atgaagaaat agagaccttt cggcgaggca gtaacgctac tcgcaactgc tcttgctcca
     2761 cagcccttaa actacctgta cgatgctgca taccccattg ccatagctgg acaggaatag
     2821 acggtaaatc tgtaggaaaa tcagcatctc gatcgtattt atccatcacc agatggttat
     2881 ttctgaataa gatcgtacgc aaaataattt gtgtgaactc aaataccgac agagatgcat
     2941 ctaacctata gtctgtttca ccatggcttt tgatccgact gccctctaca atgccaggtg
     3001 caaaggactt aaactcggct tgtagtgttc taaaagtgct ttccactatg cctttagcat
     3061 cgccacgtct aggtggagca ctttccactc gcacattaaa actagaaact aaggcttcga
     3121 cctgatgact cattaattcg ccacggtccg ctagcaacac atctggcaaa cctacacacg
     3181 gccagtctga gctactaatc tcaatatcat gctgggcaca aatggccgtt ttgtcagagc
     3241 aagcatttac aaaagcctgc atcgccacca cataagacgg attttcaaag ccgatataaa
     3301 agcccgtgat catccgacta aacacatcaa tcacaatgta aagcgttggt cttcctatga
     3361 ttttttggcg atcatgatga tccactaaat aaatatcagc aatcgtggca tcaatctcat
     3421 aacgactccc agggcctaac gcctgagaag tggctgtact acttaagggt cgtacgtctt
     3481 ttttatatac ccctgcttta actctagact ttaagcgctg agctttaggg tattctcgat
     3541 cataaaaata acgaaactga cgtagtgttg ggtaatcctc ttggggaatg cgaggaaaat
     3601 actgagcaaa caagtccaca aatcgtctat aggcaacggt ggtctttgta cctttttgat
     3661 ttaacaggtg cttttctatg gtcaacctaa aaaggcgttc aatctcgggc gttaccttgg
     3721 ttccttcacc cttaccatat tctctggctc ggccaatctt tgctgttcct gtcgctgaac
     3781 gtctttcccc tggtgcaccg ctgtttttgt agtcaggaat taatgcatta ggcgtttgac
     3841 cacgctgcca gtaacggcgt aacaacttat aaactgtagc cttagtaacc ttatgttctt
     3901 ggaccacatg ctcaacgagt tcgcttctga ctttagggtc gaaacgatcc ttactattaa
     3961 taataggaag aatttttcga taatcctcct cgcgcttctg gaagctgaca gaatctacag
     4021 acggctcttc taaatcaaga tgtacataag ggtcatcagt tctaactaag cggccttcat
     4081 ctaaatactg cattagcaac aactcagccc tagcttgtgg aactccttta tcagcgctta
     4141 tttgcatcca gacaacttgg ccatcctcta tagccaaaat gcgatacgga tcattatcaa
     4201 atagcacaac ctcattaatt tgccacatag cgcaactcct ccatattcac tacttggcta
     4261 atacagagat ctgcacactt atttgccctg aaagacttat aaatattgaa cttaataaaa
     4321 ccatttgcgg ttaaggctcg tatctcactc aatgttttgc ctaactccaa atcataagca
     4381 atatcaacct gcttacagac attgataatg ttttcatctc ctttttcttg caggatatgg
     4441 gccaatgggg atagttgtgc taaaagctcc gcagaaactt cttctgtttt cactgaataa
     4501 agccattcaa tattttcttt tactacggga tttatttctt tatcagtaaa aatgaaccaa
     4561 ggaatttgct tttgctgcca atagcgacgc tctagttcta gtttttctaa ggtacgctcg
     4621 tcttgtaagg ctgctgcagg tttgacttga atagcaaact gctcaaaagg accatctttg
     4681 cagtccacta aaaaatcagt agacataacc tgatctacac cacgaataac aggatgctta
     4741 ataccactat ctattgcaat ctgcctggta tcactaggta ataaggggaa ctgctcgcgt
     4801 atatctagca cgctgctctc ccactcaaga ctgagaaaaa cagcaagctc taagtcagat
     4861 agcaaatgat ggactcgtcc cgtcttatga gaataaatac ggtgggaacg acctgaagaa
     4921 ggaacttctt gtactgttag ccatggaata tagtctttac catgcccttg gccacgcccc
     4981 tctttaatac gacgggcaat ttgcacttca gaaaatgaag agtttgcttt agccataaca
     5041 aaagtccagt atgctttttc acagcataac tggactgatt tcagtttaca actattctgt
     5101 ctagtttaag actttattgt catagtttag atctattttg ttcagtttaa gactttattg
     5161 tccgcccaca agcccttttt tatctatgat agtgattact caaccgtaac cgattttgcc
     5221 aagttacgcg gctggtcaac gtcggtgcct ttgatcagcg cgacatggta agccagcagc
     5281 tgcagcggaa cggtgtagaa gatcggtgca atcacctctt ccacatgcgg catctcgatg
     5341 atgtgcatgt tatcgctact tacaaaaccc gcatcctgat cggcgaagac atacaactga
     5401 ccgccacgcg cgcgaacttc ttcaatgttg gatttcagtt tttccaacag ttcgttgttc
     5461 ggtgcaacga cgataaccgg catatccgcg tcaatcagcg ccagcgggcc gtgtttcagc
     5521 tcgccagcag cgtaggcttc agcgtgaatg taggagatct ctttcagctt caatgcgcct
     5581 tccagtgcga ttgggtactg atcgccacgg cccaggaaca gtgcgtgatg tttgtcagag
     5641 aaatcttctg ccagagcttc aatgcgtttg tcctgagata gcatctgctc aatacggctc
     5701 ggcagcgcct gcagaccatg cacaatgtca tgttcaatgg aggcatccag acctttcagg
     5761 cgagacagct tcgccaccag catcaacagc acagttaact gagtggtgaa tgctttagtg
     5821 gacgccacgc cgatttccgt acccgcgttg gtcatcagcg ccagatcgga ttcgcgcacc
     5881 agagaagaac ccggaacgtt acagattgcc agcgaaccaa ggtaacccag ctctttcgac
     5941 agacgcaggc ccgccagggt atccgcggtt tcgccagact gtgacaaggt gatcatcagg
     6001 ctgttacgac gcacggcaga tttacgatag cggaattcag aggcgatttc gacgtcgcac
     6061 ggaatacctg ccagcgattc aaaccagtag cgggaaacca taccggagtt ataagaagta
     6121 ccacaggcga ggatctgaat atgctcaacc ttcgacagca gttcgtcggc gttcggtccc
     6181 agctcgctta aatcaacctg accgtggctg atgcgcccag taagggtgtt tttgatcgcg
     6241 ttcggctgtt cgtagatctc tttctgcatg tagtgacggt aaataccttt atcgcccgcg
     6301 tcatattgca gattggattc gatatcctga cgttttactt ccgcgccagt tttatcgaag
     6361 atgtttaccg aacggcgagt aatttccgca atatcgccct cttcaaggaa gataaagcga
     6421 cgggtcaccg gcagcagcgc cagctggtca gaagcgataa agttttcgcc catacccagg
     6481 ccaatcacca gcggactacc agaacgtgcc gccagcaggg tatccgggtg acgggagtcc
     6541 atgatcactg taccgtacgc accgcgcagc tgcgggatag cacgcagaac agcctcacgc
     6601 agagtcccgc cttgttttag ctcccagttc accagatggg caatcacttc ggtgtcggtt
     6661 tcagaaacga aggtatagcc acgcgctttt aactcttcac gcagcggttc atggttttcg
     6721 atgatgccgt tatgcaccac cataatgtgt tcagaaacat gcggatgcgc gttagcttct
     6781 gaaggttcac cgtgggtcgc ccagcgagtg tgagcaatac cggtgccgcc atgcagagga
     6841 tgttcttccg ctgcctgagc cagcatctgg actttaccga ggcgacgcag gcgggtcata
     6901 tgaccttccg catcaacaac ggccagacca gcagagtcat atccgcggta ttccagacga
     6961 cgtaaacctt caagaaggat ttctgctaca tcacgttgcg cgatcgcgcc aacaattcca
     7021 cacatagttt ttgattccga tttatatcgt tgtcggtcaa cctatatgcc cgttttttcg
     7081 ggcgccccga gccttgtaga gagtggggtt atttttatag ttactgcttg tgggagggag
     7141 attatgttat ctcctcatcc cagatgaccg gattacccgg ccagaattac tttttcttta
     7201 ccggacgacg ccagccttct ttctgagtct gcggcacacg gctgatagct aatgcatttt
     7261 cgccgacatt acgcgtcaca gttgtacccg cagcaatggt cgcgcctttg cctactgtta
     7321 ccggggccac cagctgagtg tcggaaccga caaacacatc gtcgccgata atggtcttaa
     7381 atttattcgc accatcgtag ttgcaggtaa tggttcccgc gccgatgtta acgttatcgc
     7441 caatttccgc atcgcccagg taagtcagat gaccagcttt cgagccttta cccagacgcg
     7501 cttttttcat ctcaacaaag ttaccgacgt gtgcaccttc cagcaactca gcaccaggac
     7561 gcagacgggc aaacgggcca atagtacagg ccgctgccag attcacgtct tccacaacgg
     7621 tatacggact gatttcgcaa tcatcgccaa tcacgctgtt tttaatcacg caaccggtgc
     7681 cgattttcac gcgatgaccg agagtcacgt tgccctcgat gataacgtta gtatcaattt
     7741 caacatcgcg cccgtgagta agcgtaccgc gcagatcaaa acgcgccgga tcgcgcagca
     7801 taacgcctgc taacagcagt ttttcagcct gttcggactg gtaaacgcgc tccagacggg
     7861 agagttgcag gcggttattc acaccttcta cttcgcttaa acgttgcgga tgaacggcga
     7921 cgatttcacg cccttcctga tacgccagcg caataatgtc ggtgatgtag tattcgccct
     7981 gagcattatt gttggtcagc ttcgccagcc agcgtttcat atctgcgccg ttagagatca
     8041 gaatgccggt gttgctctcc tgaatctgac gctgctcgtc ggtggcatct ttgtgctcaa
     8101 caatgccggt aactttgcca ttttcacggg tgatacgtcc ataaccggtc ggatcatcca
     8161 gtttcaccgt cagcagacca atgccaccct gcggtttagc atcacgcagg cgctggagtg
     8221 tttcgacaga gatcagcggc acgtcgccgt agagcattaa aatgtcttca tcatcggcaa
     8281 agaaaggtgc ggcctgctgc attgcatgac ccgtacccag ctgctctgcc tgaagcaccc
     8341 agttaaggtt gtcgtctttc agcgcctgtt taagcagatc gccgccgtga ccgtacacca
     8401 ggtgaacgtg cgctgcgcct aattcattcg cagcatcaat gacatgctga accatcgctt
     8461 tcccggcaag ggtatgcagc actttcggaa gatcggaata catgcgcgtg cctttgcctg
     8521 cggcaaggat cactacgctc atagcattat tcaacatacg cgtcctgact gtaatttgag
     8581 aacgaattta aaccgcttca ccttgaaaaa actacatttt tttcatcgtg aaatggacag
     8641 aggataaatt gttcaataac ggattatccc cgctgacgaa agtgccattt tcgaccatcg
     8701 tcacgccttt tgtctgcaga aaattaaggc agtaccttca tttaagcgtc aggtggatgt
     8761 ttttgctctt atttcgatca atgaataaac gggaaaacag gggtgtttta tatcagcagg
     8821 atctatgtga acgctcttca ggacggatca cgcgtaaaaa aaaaccagcc tgtttccaga
     8881 ctggcttttg tgcttttcaa gccggtgtta catcgctttt ttggtcaact cgataacgcg
     8941 cagctgcgcg atcgctttgg ccagttccgc agacgcctga gcgtaatcta cgtcgccgtg
     9001 agagctgcta atgtgctctt cagccttacg tttcgcttcc atggctcgcg cttcgtcgag
     9061 atcctggccg cgaattgcgg tgtcggccag aacggtcacg ttgccagact gcacttcaag
     9121 aatgccgcca gacagataga taaactcttc gtgaccgtgc tgtttcacga tgcgaatcat
     9181 accaggctta atggcggtga gcagcggtgc gtggccaggg tagatcccca gttcaccttc
     9241 gctacccgtt acctggattt tctcgaccag accagagaac atttgttgct ctgcgctgac
     9301 gacgtccagg tggtaagtca ttgccatatc accctccgat taaggcgtta aagttttttg
     9361 gctttttcca cagcttcttc gatggaaccg accatgtaga acgcctgctc cggcaggtga
     9421 tcgtattcgc cttccatgat gcctttaaag ccacggatgg tgtctttcag ggagacgtat
     9481 ttacccggag aaccggtgaa tacttctgcc acgaagaacg gctgggacag gaagcgctgg
     9541 atcttacgag cacgcgctac caccagtttg tcttcttcag acagttcatc catacccagg
     9601 atggcgatga tgtctttcag ttcctgataa cgttgcagga tggactgaac gccacgcgcg
     9661 gtgtcgtagt gttcctgacc aaccaccagc gggtccagct gacggctggt ggagtccagc
     9721 gggtcaacgg ccgggtagat acccagagac gcgatctgac ggctcagtac cacggttgcg
     9781 tcaaggtgcg caaaggtggt tgccggagac gggtcagtca agtcatccgc aggtacgtat
     9841 accgcctgta cggaggtgat agaaccagtt ttggtggagg tgatacgttc ctgcagaacg
     9901 cccatctctt ccgccagggt cggctgataa cctaccgctg aaggcatacg gcccagcagt
     9961 gcggatactt ccgtaccggc cagggtgtaa cgatagatgt tgtcaacgaa cagcagaacg
    10021 tcacgacctt cgtcacggaa tttctcagcc atggtcagac cggtcagagc aacgcgcaga
    10081 cggtttcccg gcggctcgtt catctggcca tacaccaggg atactttgtc gataacgttg
    10141 gagtcggtca tttcgtggta gaagtcgtta ccctcacgag tacgttcacc tacgcccgca
    10201 aacacagagt aaccggagtg ctcgatcgcg atgttacgaa tgagctccat catgtttacg
    10261 gttttaccta cacccgcacc accgaacaga ccaactttac cgcccttagc gaacggacac
    10321 atcaggtcga taactttgat accggtttcc agcagttcct gagagtttga cagctcttcg
    10381 taggaaggtg ctgcgcggtg aatcgcccaa cgctcttctt caccgatctc gcctttcatg
    10441 tcgaccggtt cacccagtac gttcatgata cggcccagag tcgctttacc taccgggact
    10501 tcgatcgggt gttcgaggtc ttttacatcc agaccgcgac gcagaccgtc ggaggaaccc
    10561 attgcgatgg tacgcacgat accgccgccg agctgctgct gaacttccag caccagacgc
    10621 tcattaccat tttgcacctc aagagcatcg tacacgcgcg gtacggcatc ctgagggaat
    10681 tcgacgtcaa ctacggcgcc gattacctgg acaatctttc cagtagccat cttaaatcct
    10741 ctacgaaata acctgtttaa accgcggcgg cccccgagac gatctcggtg agttcctgag
    10801 taatgctggc ctgacgagct ttgttgtata ccaactgcag ctctttaatc aggctgccgc
    10861 cattgtcggt cgcggctttc atcgccacca tacgggcggc ctgctcgctg gccaggtttt
    10921 caaccacgcc ctgataaacc tgagattcga cataacgacg cagcagggta tccagcaacg
    10981 ccttcggatc gggttcgtac aggtaatccc aggatttatg tttcagatca tcatcatctg
    11041 atgccggtaa cggcagcagc tggctgatgg tcggaacctg agacatggtg ttaataaatt
    11101 tgttgctgac aatgtaaagc ttgtccagac ggccttcgtc gtaggcctgc aacatcactt
    11161 ttaccggacc gatcagttcg gacagggaag ggttatcccc catgccggtg acctgggcaa
    11221 caacattgcc gcccacggag ttgaagaacg acacgccttt cgagccgatc attgcgaggt
    11281 cgcattgaac gcctttgtcg gtccaggtct tcatttccgc cagcagtttt ttgaacaggt
    11341 taatgttcaa accaccgcac aaaccacggt cggtcgacac caccaggtag cccacgcgtt
    11401 taacgtcgcg gtcttccagg taaaggtgct tatattccag attaccatgt gcaaggtgac
    11461 caatcacttt gcgcatggtt tctgcataag gacggctggc cgccatgcga tcctgcgatt
    11521 tacgcatttt ggaagcggcg accatctcca tcgctttagt gatcttttgc gtgttctgga
    11581 cgcttgcgat cttactacgt atctcttttg cgccggccat gagcttctcc tcaatgcctt
    11641 gcggcctgcc ctaaggcaag ccgccagacg ttaccaggat tgggttgctt tgaaggaatc
    11701 gaggatgcct ttcagtttgc cttcgatttc gtcgttgtag ccaccggtct ggttgatctc
    11761 ttgcatcaac ggagcgtgat cacggtcgac gtaagccagc agagcggctt cgaagctgcc
    11821 aattttcgac agttcaacat ccgccaggta accacgttct gctgcgaaca gaaccagaga
    11881 ctgctgcgca acggacatcg gcgcatactg tttctgtttc agcagttcgg tcactttctg
    11941 accgtggtca agctgcttac gtgttgcatc gtcaaggtcg gatgcaaact gagagaacgc
    12001 tgccagttca cgatactgtg ccagagcggt acggatacca ccggacagtt ttttcatgat
    12061 cttggtctgt gctgcaccac caacacggga tacggaaata cccgggttaa ccgcaggacg
    12121 aataccggcg ttgaacaggt tggtttccag gaagatctga ccatcggtaa tggagattac
    12181 gttggtcgga acgaacgcag aaacgtcacc cgcctgagtt tcgataatcg gcagtgcggt
    12241 cagagaaccg gttttccctt tcacttcacc tttggtgaag gcttcaacgt attcggcgtt
    12301 aacacgtgca gcacgctcca gcagacgaga gtggaggtag aaaacgtcgc ccgggaatgc
    12361 ttcacgtcct ggcggacgac ggagcagcag ggagatctga cggtaagcaa cagcctgttt
    12421 agacaggtca tcgtaaatga tcagcgcatc ttcaccgcgg tcacggaagt attcgcccat
    12481 tgcgcaaccg gcatacggtg ccaggtattg cagtgcagcg gattcagacg cggttgctac
    12541 cacaacgatg gtgttagcca gtgcgccgtg ctcttccagt ttacgtacca cgttagaaat
    12601 ggtggacgct ttctggccga tagcgacata gatacatttg ataccggaat cgcgctggtt
    12661 gatgatggca tcgatagcca gtgcggtttt acctgtctga cggtcaccga tgatcaattc
    12721 acgctgacca cgaccgattg ggatcatgga gtcaacggct ttataaccgg tctgtaccgg
    12781 ctgatctacg gactgacgtt cgataacgcc cggagcgatt gcttctacag cagagaagcc
    12841 gtcgtgatcc agcggacctt taccgtcgat tggtgcaccc agagtgttaa ccacacggcc
    12901 cagcaggcca cggccaaccg gaacttccag gatacggcca gtacacttaa ctttcatgcc
    12961 ttcggcaagg tcagcgtacg gacccataac aaccgcacct acagagtcgc gctcgaggtt
    13021 cagtgcgata gcgtaacggt tacccggcag ggagatcatt tcaccctgca tacaatcggc
    13081 caggccgtga atgcggataa caccgtcact tacagaaaca atagtacctt cgttgtgagc
    13141 ttcactcaca acattgaact gagcaatgcg cagcttgatc agttcgctga tttcggtgga
    13201 attcagttgc atgctccagt ccccttaaga ctgcaagacg tctgcaaggc gctcaagacg
    13261 accgcgtacg ctgccatcaa tgaccatatc acccgctcgg atgataacgc ctgccattac
    13321 agacttatcg attttgcaat tcagcttaac tttgcgtgac agacgttttt ccatcgcagc
    13381 agaaattttc gcgagctgtt gttcactcag tgcggcagcg gaaatgacgt ctacctcagc
    13441 ggtagcctca ctcacggcac gaaggtgaat aaactgctcc agaacatccg ggagcgcgtt
    13501 aagacgacca ttttcagcca ttacccgaat caggttctga ccgttttcgt ccagttgctc
    13561 accacaaact gcgataaacg actcggcgag cgtttctggc gcaagcgcgc cagagagaag
    13621 ctctgccatt tgttcgtttt tggttacctc ggcggcaaac gccagcatgt cctgccagcg
    13681 ttctacactt tggtgttcga cggcaaagtc aaaagctgct ttggcgtagg ggcgagctac
    13741 cgtaataaat tcagacatca gcccctccct ccttacagtt cagcgacaag tttatccacg
    13801 atgtcgctgt tagcagcttc atccacggaa cgttcgatga tcttctcggc gccagcaaca
    13861 gccaggatag caacttgctt acgcagctct tcacgggcac gtttacgctc ggcttcaatt
    13921 tctgcctgcg cctgggccac gattttagta cgttcctgtt ctgcctcagc tttcgcttcg
    13981 tccagaatct gcgagcggcg tttgttcgcc tgctcgatga ttacctgggc ttccgctttc
    14041 gcttttttca gctggtcggt cgcgctggcc tttgcaaggt caaggtcctt atgtgctcgt
    14101 tctgcggaag caaggccgtc agcaatttct ttttgacgtt tttcgatggc tgccattaat
    14161 ggcggccata cgtacttcat gcagaacaga acgaacagga caaacgcgat ggcctggccg
    14221 aggattgttg cgttaagatt cacagcacaa tgcctctatt tagttaacgt tctgatattg
    14281 ctctttaaat aaaagcaacg cttactacgc gacagcgaac atcacgtaca gacccagacc
    14341 tacagcgatc atcgggatag catccaccag acccataacg ataaagaact gagtacgcag
    14401 cagaggaatc agatcaggtt gacgcgctgc gccttccaag aatttacccc cgaggatgcc
    14461 gataccgatc gcagcaccga ttgccgccag acccatcatc acagcggcag ccatgtacag
    14521 cagatccata ttcaggtttt ccatgacagt ctccagtttg tttcagttaa aacgtagtag
    14581 tgttggtaaa ttaatgttct tcagacgcca tcgacagata gacgatcgtc agaaccatga
    14641 agatgaaggc ttgcagcgta atgatcagga tgtggaaaat ggcccacggc acattcagga
    14701 tccactgtga ccaccacggc aacagaccag caatcagaat gaaaatcagc tcaccggcat
    14761 acatgttacc gaacagtcgc aaaccgagtg aaactggttt ggacagcagg cttacccctt
    14821 caaggattaa gttgacagga atgaacgccc agtgattgaa cggctgcagc gtcaactctt
    14881 tcgtgaagcc gccgatgcct ttcattttga tgctgtagaa cagaatcagg ataaatacgc
    14941 ccaatgccat agacagcgtt acgttcacgt ccgcagacgg aaccacacgc agtgcaggca
    15001 gacccagtac atgttcagca atgtacggca gcaggtcgat aggcagtaaa tccatcaggt
    15061 tcatcaggaa tacccagacg aagatcgtca gggccagcgg agcaatcagc ttgcttttgc
    15121 catggtacat gtctttcacg ctaccattaa caaagccgat caccagctca atcgcggtct
    15181 gaaacttacc tggcacaccg ctggtcgcct ttttggctac gctacggaat aaaaccagga
    15241 acaacagacc cagcaccacc gagaagaaca tggagtcaat attgattgtc cagaaggtgg
    15301 ctggggggtt ttgtggatcc accagcgaga atgtacgcag gtccagctga aggttattca
    15361 ggtggtgtcc tatgtaatcc tgcggcgtca tattttctga agccatgatg ccttttaccc
    15421 tttgttgtta attacagccg gtgccagtat ctgaaccacc agcaccaaaa cccacgtaac
    15481 gatcagcggc aagaataccg cctttaaaac cgccaacgcc accaccagta acaccaacat
    15541 cgccagaact ttgaaagctt cgccaaatgc gaatgtccag gccacccggc ctttcgctgg
    15601 tgtatgcgcc tggtgacgcc aggcaaatat cataaacaaa acgttaggca gaaagactgc
    15661 caggcccccg cttattgcag agacgcccca gaaggggtct ttgaggctga acagcaatcc
    15721 acttgctatc accaccagta actgaacgag cagaagcttc cgagcaacgt ttcgactcac
    15781 gagcgacaca gacatcacgt tttttactcc tgctcccttc gaggtatgcc gcgtgtcgta
    15841 taaaactttc tttaaggctt agagtcaagc atcaaaaagc ggtcaaatta tacggcgcgc
    15901 ccccgtgatt tcaaacaata agtagccaaa aggtgaataa atgtttaaat atttttccag
    15961 tgcatacaat tgcgactttt ctactaaccc tgttcgatca tgaaaaactg taaataacgc
    16021 gtaaacactg gtgataaagc gtgcttcaga tcacatattg cgcatgttcg cgcacagcat
    16081 atttatttac ttggcaaatg atgcctttgc aagtttatga tatttcagtc taaaaacaga
    16141 tactgtttta ataaatgaca tttacacaac aaaaaccacc cattgacatt tttaataatg
    16201 ttttagcagc caatgatggt tcttagcgcc gatttttagc agactgatat tttcactaat
    16261 gacttatttt ctgcttacca aaaaaagcca cgttatcttg ttgatgcaaa agagtgaacg
    16321 tggcgttaaa tgtaaccagt tatatcagta gaaaacctgg ttgttgttaa cagtctaacc
    16381 ggtcaatttt ttatgatttt tttgataaaa attaaatttt atttgcttta atcaccacca
    16441 gatgacgttc gccatccagg gctggaacct gaagtttaac cactgattcg acctgatatt
    16501 cttcgggcaa caaagcgatt tcatcttccg gcatttgccc tttcagcgcg tagaaacggc
    16561 cttgctcacc aggaagatgg tggcaccagc tcaccatatc gttcagagag gcaaaagcgc
    16621 ggctaattac gccatcaaat ggcggctctg aaggaaactc ttctaccctg ctctgtacag
    16681 gttcaatatt ctccagttta agctcatgtt gcacctgacg aaggaaacgc acgcgtttac
    16741 caaggctatc caacagagtg aaatgggctt caggacgcac gatagagagt ggaatgcctg
    16801 gcagtcctgg tccggtgccg acatcgataa accgttcacc ttgcagatac ggtgccacca
    16861 caatgctatc gagaatatgg cgtaccagca tctcattagg atcgcggacc gaagtcaggt
    16921 tgtacgcttt gttccattta tgcagcatat tcacgtaggc aataagctgg tttttctggt
    16981 gatcggtaag cgaaatacct gcgtctttca gcagtaagga gagtttgttg agcacggtga
    17041 ttacctgttc ttgatgcgtt gcctggtaag cgggtgctta ccaggcattt ttaatgcgtt
    17101 atgcgctacg acgcagcata ccctgttttt tcagccacac cagcagaatg gagatagccg
    17161 caggcgtgac gccagaaata cgcgaagctt ggccgataga ggctggtttg tgatcgttaa
    17221 gtttggcgat cacttcgtta gaaagaccgg atacctggcg gtaatccagt gtcgcgggta
    17281 gcagggtgtt ctcgttacgc agctgctttt cgatctcatc ttgctggcgc gcgatataac
    17341 cttcgtattt aacctgaatc tcaacctgtt ccgccgcctg ttcgtctgtc aacgcagggg
    17401 caaacggcgt cagcgtggtt aatttttcat aagtcatttc cggacgacgc agcagatctt
    17461 caccactggc ttcacgggaa agcggcgcag tcaggtgagc attcacttcg gctgcagctt
    17521 ccgccgacgg ggttacccag gtcgatttca gacgctgacg ctcacgctcg atattctcaa
    17581 gtttctcgtt aaagcgcgcc caacgttcgt catccaccag gcccagttca cgaccgattt
    17641 cagtcaaacg cagatccgca ttatcttcgc gtagcatcag acgatattct gcgcgcgaag
    17701 taaacatacg atacggttct ttggttccta aagtgcacag gtcatcaact agtacgccga
    17761 gatacgcctg agaacgtgcc ggagcccaac cttctttgtc agcagacaga cgggcagcgt
    17821 taagaccggc cagcaaacct tgcgcagcgg cttcttcgta accggtagtg ccgttaatct
    17881 gaccagcaaa gaacagcccc tggataaact tgctctccag cgtcggtttc aggtcgcgag
    17941 gatcgaagaa gtcatactca atggcataac ccggacgcac gatcttcgcg ttttccatcc
    18001 cctgcataga gcggacgatt tgcatctgca catcgaacgg caggctggtg gagataccgt
    18061 tcggataaat ttcattagag gtcagtcctt ccggttcaag gaagatctga tgctgatttc
    18121 tgtcggcgaa gcgcatgact ttgtcttcga tcgacgggca gtagcgtggg ccgacacctt
    18181 cgatcacccc tgcatacatt gggctacgat cgaggttact gcggatcaca tcatgggttt
    18241 tctcgttggt atgagtgata taacacggca cctgctgggg atgctgggac gcattgccca
    18301 taaacgagaa taccggcatt gggttatcgc catgctgttg cgccagcaca ctaaagtcga
    18361 tagttcgagc atcaatacgc ggtggtgtcc cggttttcag acgaccaacg cgcagcggca
    18421 gttcacgcaa acggcgagaa agcggaatgg acggcggatc accagcacgg ccaccgctgt
    18481 aattatccag accgatatga attttaccgt cgaggaacgt cccaacggtg agcacgactg
    18541 ctttggcacg gaacttcagt cccatttggg taacagcacc gaccacgcga tcgttttcga
    18601 caataagatc ttcaaccgcc tgctggaaga tcatcaggtt cggttggttc tccagcgccg
    18661 tacgtaccgc ctgacggtag agcacacgat ccgcctgagc tcgggtagcg cgaaccgccg
    18721 gtcctttgct tgcgtttagt atcctaaact ggatacccgc ttgatcgatc gctttcgcca
    18781 tcagaccgcc gagtgcatcc acttctttta ccagatgtcc cttcccaata ccgccgatcg
    18841 ccgggttgca gctcatctgc cccagagtgt cgatattgtg tgtcaaaagc agagtctgtt
    18901 gacccatacg cgccgcggcc atcgcggcct cggtgcctgc atgacccccg ccaatgatga
    18961 tgacgtcaaa aggatccgga taaaacatgg tgattgcctc gcataacgcg gtatgaaaat
    19021 ggattgaagc ccgggccgtg gattctactc aactttgtcg gcttgagaaa gacctgggat
    19081 cctgggtatt aaaaaggaga tctatttatt tagagatctg ttctattgtg atctcttatt
    19141 aggatcgcac tgccctgtgg ataacaagga tccggctttt aagatcaaca acctggaaag
    19201 gatcattaac tgtgaatgat cggtgatcct ggaccgtata agctgggatc agaatgaggg
    19261 gttatacaca actcaaaaac tgaacaaccg ttgttccttg gataactacc ggttgaacca
    19321 agcttcctga cagagttatc cacagtagaa cgcacgatct gtatacttat ttgagtaaat
    19381 taatccacga tcccagccat tcttctgccg gatcttccgg aatgtcgtga tcaagaatgt
    19441 tgatcttcag tgtttcgcct gtctgttttg caccggaatt tttgagttct gcctcgagtt
    19501 tatcgatagc cccacaaaag gtgtcatatt cacgactacc aataccgatt gcgccaaagc
    19561 ggaccgcaga aagatcgggc ttctgttcct gcaatgcttc atagaaagga gaaaggttgt
    19621 ccggaatatc tccggcaccg tgggtggagc tgataatcag ccagatcccc gaggcagata
    19681 aatcttccaa cagcggaccg tgcagcgttt cggtggtaaa acccgcctct tccagctttt
    19741 cagccaggtg ttctgctaca tattcggcac cgccgagggt gctgccgctg ataagagtga
    19801 tatctgccat aaaccgccac ctttattaag agtggcgtat tgtacgctgt gaacgcgttg
    19861 ggatctacct gtggaaaagt atgggattaa aaaagccgat cagggcttga tagtacgcat
    19921 gatcgggtgt tgcaggacga tcaatgtctc ggtggactga atttcatcaa ttgtttggat
    19981 cttgttgata agtacatgct ggagagcgtc gatcgaacgg cacattactt ttataaagat
    20041 gctgtagtgg cctgttgtgt aataggcttc agtgacttca tcaaggcttt ccagctttgc
    20101 cagcgcggaa gggtagtctt tggcgctctt taatataatg ccgataaagc agcctacgtc
    20161 ataaccgagc tgcttcgggc tgacatcaat acgcgccccg gtaatgatcc ccgcctgctt
    20221 cattttctct acccgaacgt gaatcgtccc cggactgacg ccaaattgtt tcgccagttc
    20281 ggcgtaagcg gtgcgcgcat tgcccattaa tgcttccagg atgccacggt ccagattgtc
    20341 gatcagataa ttttccatag gattttctta tgcagattga tgattcattc tattttagcc
    20401 ttctttttta atgaatcaaa agtgtgttag gctttttatt gaatgattat tgcatgtgtg
    20461 tcggtttttg ttgcttaatc ataagcaaca ggacgcagga gtataaaaaa tgaaaaccgc
    20521 ttacattgcc aaacaacgcc aaattagctt cgtgaaatct cacttttctc gtcaactgga
    20581 agaacgtctg gggctgatcg aagtccaggc accgattctt agccgtgtgg gggatggcac
    20641 gcaggataac ttgtcgggct gtgaaaaagc ggtgcaggta aaagtgaaag ctctgcctga
    20701 tgcccagttc gaagtggttc attcactggc gaagtggaaa cgtcagacct tagggcaaca
    20761 cgacttcagc gcgggcgaag ggctgtacac gcacatgaaa gcccttcgcc ccgatgaaga
    20821 ccgtctttct ccgttgcact cggtctatgt agaccagtgg gactgggaac gcgtaatggg
    20881 cgacggtgag cgtcaattct cgactctgaa aagcacggta gaggcgatct gggcgggaat
    20941 taaagcaacc gaagctgcgg ttagcgaaga gtttggcctg gcaccgttcc tgccggatca
    21001 gatccacttc gtacacagcc aggagttact gtctcgttat ctggatctcg atgccaaagg
    21061 gcgtgagcgg gcgatagcga aagatcttgg cgcggtattc cttgtcggga ttggcggcaa
    21121 gctgagcgat ggtcatcgcc acgacgtgcg cgcaccggat tatgatgact ggagcacccc
    21181 gtcagagctg ggtcatgcgg gtctgaacgg cgatattctg gtgtggaacc ctgtactgga
    21241 agatgcgttt gagctttctt ccatggggat ccgcgtggat gccgacacgc tgaagcatca
    21301 gctggcgctg accggtgatg aagatcgtct gcagctggaa tggcatcagg cgctgctgcg
    21361 cggtgaaatg ccgcagacca tcggcggcgg tatcggccag tctcgtttga ctatgctgct
    21421 gctgcaactg ccgcatatcg gccaggttca gtgtggagta tggccagctg ctgttcgcga
    21481 gagcgtccct tctctgctgt aataatttat cgccgccagc gtctgagcag gcggcttcgc
    21541 atcccggtat caaagcgcca gatatgatcg aaaatgcgca tgatgccggg tttgccgtgt
    21601 gccgacatcg ccacggcatg aaagcgatgc tgatgtaccc gctgcagctc tttcacttta
    21661 ctcgtcacgt cgtcaggcaa ccgctgagcg ataaaatcag aaatcaccac cgcatcggca
    21721 tcaaaccatt ccctgctttg caagcgttcc ataatggcgc gaaaacaact ggcaagatcg
    21781 gtgccgccac gaaactgctg gcttaaaaaa cggattgctt gttcgatgcc ttgtgggcct
    21841 gaaagctcat aacggacgat ctcggtggaa aatagcataa tatagcagcg ccggttttct
    21901 gcgagagcaa tgcgcatcaa ggccaggcag aacgctttcg cacactgttc attaaagccg
    21961 cccattgagc cggaagtatc cacacagaca ataaacggcc cgcgcggctg ttcatcgtaa
    22021 tctttatgta ccaccggacg ttcgatcact ttttcacgcc acgactcacc gtgcaggcga
    22081 taggtgagca actgtttttc caccagccga cggtaaaact catactccag ttccgttatc
    22141 cctagtgtcg ccagttctgg cggcaggaga cgtaaaatat catcgctttg ttgcagacca
    22201 tcaacctgct caggaaccgt cgccggttcg cgcaccatgg tgcggaaggt ttccatctgc
    22261 gcatcgttgc gcggtattga tttggcttcc cgagaacgcc ccagctgctc tgccaggcgt
    22321 ttcagttccg gctgttcgtt aagaaattca ccgtatttca caatcaactg atagtcgcca
    22381 cgtttaagct ggccggcgct catatcccac agacgaccag ctgcggtatt gttatctgcg
    22441 agaatcggtt caagttgtcc gctcagcgtc atgcgttcct gaacttcact taacagttgt
    22501 tcgcgttctt cttctaatag ctgttgattt aacgtcgttg cttgcacgat cagacttaaa
    22561 cgccagcgct ggagaaaaag cgtgtgtaac gctgaagtta ttgtgctgtt agcatcaacc
    22621 aactgccggg cttgttctgc ccatggggaa ttcagacgat gcagtaagtc caggatctgt
    22681 ggtagctgca caataaactg cggcgtggag aggagctggc tttgctgata gcacatcacc
    22741 tcttcggtga gttctggcgg gactcgggca tctttcagcc gactgcgcag cgcctcacgc
    22801 cagcggggaa catcatcagt gattgctgcc ttcagtcgtg ggaatttttc aaagaagacc
    22861 gccagctgcg gtgaggccag cagtgcgatg atcatctctt cgatcaatcc ctcttcgctg
    22921 acggccagca tcacattaag cgtatccagc gttagcattg ttgtgcctgg cgaatctgtg
    22981 caccgacatc ctgtaggctg gcttcaatgc gacctaacca gtcgccaggg ataaacagac
    23041 atttttgctg ttcgctgaat aaagcgtgtt gcttacgcca gtcgctttca agctcttcca
    23101 gttgttgttt tatttcacct ggcagacctt cagccgatga accgggaagt gccagcgtac
    23161 tgccttgtaa acttacatcg cgtacaacaa gatgttgggt gctatcaact tccagattca
    23221 gtttctgggc aaagccgata ccgttcagtt tgccgcgaat ttcaccacct ttactcagcc
    23281 actgttccag cgcgctacgc tcaaaggaga tatgaaccac ttccatatca tgcagtttta
    23341 acggtttttg cagcagcaga gtcagagtgg aagcagtaac gttaacaggg agttgatact
    23401 gctgacgacg gctaaaaatg ccgcccagac gaattaccgt taaggctgtt ttatcgcttt
    23461 gttgctgctg aagttgcagg tgacgttgca caatcgcgcc taggcgggtc aacatccctt
    23521 gctgttgcca ggcgtgaccg gtcatcaata catcaatttg ttgttgtatc aaattcaggc
    23581 tttgcgcgtc ataccacagg caatctttca gcaaaatgag atctaccggg gcaacagcac
    23641 tgcgaccgct aaaaaaggcg ctggcctgca ataatcggat cgcttttttc cagcgacgat
    23701 ccgagacata aggcgcatcc ggtaatttat ccagttgctg gcgcagcata aaaatcagct
    23761 caaatacatg atcgggcagc gtaatttcac caatctcttt ctgccagcgt tcatattctt
    23821 catctgtgac ctgcaaggca tcaggaaccg gattgtcgtt ttcatcctgt tgactggtca
    23881 gcatggagcg gaaattcgct ttatcctgca ctttatctaa ccacagacga atcagcatgc
    23941 ggtcatataa cgcttccaga ctgctgtctg cttccggcag ctcgttggag gccgccacca
    24001 gcagacgcat cgggattttt tctacgtgtg caccgttgcg gaactggcgc tcgttaatgg
    24061 cggtgagcaa ggtattaaga attgccgggc ccgctttcca gatctcatcc agaaagacaa
    24121 tttctgcttc cggcaggtaa ccgctggtta aacgttcata gcgcccttca tcttttagcg
    24181 cctgaataga aaggggacca aaaacttctt ccggcgtgga gaagcgggtc atcagatatt
    24241 caagcgcgcg ggcattctga aaggcgaatt ttaagcgccg ggcgatcaaa cttttggcaa
    24301 tacctggcgg gccaaggagg aacacacttt caccacttaa tgccgctaat aaacacaagc
    24361 ggatggcgtg gctacgttca taaagcccct tttccaacga actgctcagg cgggaaattc
    24421 tttccgctaa taaatgaggg tgagccataa tgaagtggcg tcctttcgtc aaaagttctg
    24481 cgtaaattgc gagtatagac gtttcttgct ggtggctaaa atagtctcaa ag
//
LOCUS       DADMIB010000052        24335 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.052, whole genome shotgun sequence.
ACCESSION   DADMIB010000052 DADMIB010000000
VERSION     DADMIB010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24335)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24335)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24335
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.052"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..663)
                     /gene="ldtE"
                     /locus_tag="JNZ89_001937"
     CDS             complement(<1..663)
                     /gene="ldtE"
                     /locus_tag="JNZ89_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtE"
                     /protein_id="HAY8935838.1"
                     /translation="MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTV
                     QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNL
                     AELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
                     GIKLLPVVPAGPNNPLGRYALRFAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK
                     ALF"
     gene            complement(812..1228)
                     /gene="sufE"
                     /locus_tag="JNZ89_001938"
     CDS             complement(812..1228)
                     /gene="sufE"
                     /locus_tag="JNZ89_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfuration protein SufE"
                     /protein_id="HAY8935839.1"
                     /translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSP
                     QNSIQGCQNQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV
                     RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS"
     gene            complement(1241..2461)
                     /gene="sufS"
                     /locus_tag="JNZ89_001939"
     CDS             complement(1241..2461)
                     /gene="sufS"
                     /locus_tag="JNZ89_001939"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase SufS"
                     /protein_id="HAY8935840.1"
                     /translation="MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEA
                     EFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA
                     NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLHTL
                     FDEKTRLLAITHVSNVLGTENPLAGMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCD
                     FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEA
                     GTPNTGGIIGLGAALEYVSVLGLNNIAEYELNLMHYALSQLESVPNLTLYGPQNRLGV
                     IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD
                     RLVTGLQRIHRLLG"
     gene            complement(2458..3729)
                     /gene="sufD"
                     /locus_tag="JNZ89_001940"
     CDS             complement(2458..3729)
                     /gene="sufD"
                     /locus_tag="JNZ89_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HAY8935841.1"
                     /translation="MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTR
                     KHENWKYTSLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSDAIE
                     GSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMYITQG
                     VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKL
                     AFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP
                     VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
                     LLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYA
                     FAAELTEALRDEGLKQQVLARIGQRLPGGAR"
     gene            complement(3704..4450)
                     /gene="sufC"
                     /locus_tag="JNZ89_001941"
     CDS             complement(3704..4450)
                     /gene="sufC"
                     /locus_tag="JNZ89_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HAY8935842.1"
                     /translation="MLSIKDLHVSVEDKAILRGLSLAVRPGEVHAIMGPNGSGKSTLS
                     ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA
                     LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
                     VLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV
                     LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ"
     gene            complement(4460..5947)
                     /gene="sufB"
                     /locus_tag="JNZ89_001942"
     CDS             complement(4460..5947)
                     /gene="sufB"
                     /locus_tag="JNZ89_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416198.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HAY8935843.1"
                     /translation="MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVR
                     AISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDT
                     CASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
                     EQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
                     MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKN
                     AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
                     RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKI
                     MPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ
                     RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
     gene            complement(5956..6324)
                     /gene="sufA"
                     /locus_tag="JNZ89_001943"
     CDS             complement(5956..6324)
                     /gene="sufA"
                     /locus_tag="JNZ89_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold SufA"
                     /protein_id="HAY8935844.1"
                     /translation="MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLG
                     VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQI
                     FKFHNPKAQNECGCGESFGV"
     gene            complement(6871..7059)
                     /locus_tag="JNZ89_001944"
     CDS             complement(6871..7059)
                     /locus_tag="JNZ89_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416200.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935845.1"
                     /translation="MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTL
                     SSAELKEEIYFAWRLGVH"
     gene            complement(7159..7569)
                     /gene="menI"
                     /locus_tag="JNZ89_001945"
     CDS             complement(7159..7569)
                     /gene="menI"
                     /locus_tag="JNZ89_001945"
                     /EC_number="3.1.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase"
                     /protein_id="HAY8935846.1"
                     /translation="MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDS
                     RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGIC
                     KPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL"
     gene            complement(7566..10622)
                     /locus_tag="JNZ89_001946"
     CDS             complement(7566..10622)
                     /locus_tag="JNZ89_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HAY8935847.1"
                     /translation="MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTD
                     NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD
                     MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT
                     DASGQGSLVYGKTSDHVLGVRAVLLGGDVLDTQPLPVELAETLGKSNTTIGRIYNTVY
                     QRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL
                     DITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS
                     ELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCREL
                     AGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY
                     GMFGHVDAGVLHVRPELDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY
                     SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPI
                     AVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR
                     GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTL
                     CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR
                     KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESLNAEQKARTVLVVQDPFTS
                     YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK
                     LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWY
                     FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYE
                     LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK"
     gene            11011..12123
                     /gene="ydiK"
                     /locus_tag="JNZ89_001947"
     CDS             11011..12123
                     /gene="ydiK"
                     /locus_tag="JNZ89_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HAY8935848.1"
                     /translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV
                     VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISS
                     GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI
                     GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV
                     VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT
                     WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL
                     AVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK"
     gene            12309..12416
                     /gene="rprA"
                     /locus_tag="JNZ89_001948"
     ncRNA           12309..12416
                     /ncRNA_class="antisense_RNA"
                     /gene="rprA"
                     /locus_tag="JNZ89_001948"
                     /product="antisense sRNA RprA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00034"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00034"
     gene            12552..12931
                     /locus_tag="JNZ89_001949"
                     /pseudo
     CDS             12552..12931
                     /locus_tag="JNZ89_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001014786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YdiL family protein"
     gene            12876..13598
                     /locus_tag="JNZ89_001950"
                     /pseudo
     CDS             12876..13598
                     /locus_tag="JNZ89_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707590.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            13610..14476
                     /gene="ydiB"
                     /locus_tag="JNZ89_001951"
                     /pseudo
     CDS             13610..14476
                     /gene="ydiB"
                     /locus_tag="JNZ89_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416207.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="quinate/shikimate dehydrogenase"
     gene            14508..15266
                     /gene="aroD"
                     /locus_tag="JNZ89_001952"
     CDS             14508..15266
                     /gene="aroD"
                     /locus_tag="JNZ89_001952"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HAY8935849.1"
                     /translation="MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDI
                     LEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR
                     AAIDSGLVDMIDLELFTGDDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
                     MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEV
                     FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA"
     gene            15412..17007
                     /locus_tag="JNZ89_001953"
     CDS             15412..17007
                     /locus_tag="JNZ89_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HAY8935850.1"
                     /translation="MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEAT
                     TLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRI
                     SELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKE
                     DLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNN
                     GGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQSQLYGGAPVNRFISGDFTLD
                     DSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADDFILTVET
                     GPIGGITSQGIAFGANVNTRAILDMTSQFNFYHGGGLDVCYLSFAEVDQHGNVGVHKF
                     NGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEIADGKLNIVQEGRVKKFIQELPEI
                     TFSGKIALERELDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISPE
                     LKLMDERLFIDAAMGFVLPEAAH"
     gene            17021..18172
                     /locus_tag="JNZ89_001954"
     CDS             17021..18172
                     /locus_tag="JNZ89_001954"
                     /EC_number="1.3.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310429.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HAY8935851.1"
                     /translation="MDFSLTEEQELLLASIRELITTNFAEEYFRTCDQNGTYPREFMR
                     ALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSA
                     EQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAK
                     EYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEV
                     EESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGH
                     NQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAI
                     QIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK"
     gene            complement(18215..19126)
                     /locus_tag="JNZ89_001955"
     CDS             complement(18215..19126)
                     /locus_tag="JNZ89_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8935852.1"
                     /translation="MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNET
                     ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ
                     GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL
                     YYENFKNAYRSEQGYIKKDVLIKDILFYLSNNYREKITLEQLSKKFRASVSYICHEFT
                     KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS
                     DYRRQFKNCFAEQEILSEFPQPVSLVG"
     gene            19440..20211
                     /locus_tag="JNZ89_001956"
                     /pseudo
     CDS             19440..20211
                     /locus_tag="JNZ89_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416212.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein"
     gene            20231..21169
                     /locus_tag="JNZ89_001957"
     CDS             20231..21169
                     /locus_tag="JNZ89_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit alpha"
                     /protein_id="HAY8935853.1"
                     /translation="MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAV
                     MPYGPKCIYVLEQNDALQRTENYAESIAAPLKDKHPAMLLLVATKRGKALAARLSVQL
                     NAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSH
                     QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAA
                     VLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVI
                     VAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR"
     gene            21225..22514
                     /locus_tag="JNZ89_001958"
     CDS             21225..22514
                     /locus_tag="JNZ89_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY8935854.1"
                     /translation="MSDDKFDAIVVGADVASSVAALVMARAGLDVLVIERGDSAGCKN
                     MTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHAS
                     YTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILQANVVVLAD
                     GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSD
                     GLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY
                     SAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA
                     KEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYSRMVADIMNEMF
                     TIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL"
     gene            22511..22804
                     /locus_tag="JNZ89_001959"
     CDS             22511..22804
                     /locus_tag="JNZ89_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HAY8935855.1"
                     /translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLMKA
                     CPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG"
     gene            22807..>24335
                     /gene="fadK"
                     /locus_tag="JNZ89_001960"
     CDS             22807..>24335
                     /gene="fadK"
                     /locus_tag="JNZ89_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416216.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="medium-chain fatty-acid--CoA ligase"
                     /protein_id="HAY8935856.1"
                     /translation="MHPTGPHLGPDVLFRESKMKVTLTFNEQRRAAYRQQGLWGDASL
                     ADYWQQTARAMPDKIAVVDNHGATYTYSALDHAASCLANWMLAKGIESGDRIAFQLPG
                     WCEFTVIYLACLKIGAVSVPLLPSWREAELVSVLNKCQAKMFFAPTLFKQTRPVDLIL
                     PLQNQLPQLQQIVGVDKLAPATSSLSLSPIIADNTSLTTAITTHGDELAAVLFTSGTE
                     GLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARS
                     VLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIP
                     KKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDAR
                     KTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYCSGDLCRMDEAGYIKITGR
                     KKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLS
                     L"
BASE COUNT         5982 a         6198 c         6100 g         6055 t
ORIGIN      
        1 gaataaggct ttaatatccg gtgcattcat gcgaatacag cccgaactga cgcgtaaacc
       61 gacgctgtcc ggcgcactgg taccatgaat gaggtattcg ccattaccat gcgcgaagcg
      121 cagtgcgtaa cgtcctagcg ggttatttgg tccggcagga acgactggca gtaatttaat
      181 gccacgctcc agcgaacgtt gacgaatgcc tgccgtaggc gtccaggttg gattagggat
      241 tttctgcccc acacgcgttt ccatcaccgg cgtttccagc ccctgcaagc caatacctat
      301 cggataaacc tgcacgatat tttctcccgg cggataataa taaaggcgca gctctgcaag
      361 gttaacgata atcccctgac gcggtgcatc aggtaataac agttgtgaag gaatagttat
      421 cgtcgtacca ggttttggca ccggggcgat agtgttattg gcttcaagga tcaacattgc
      481 cgcagtatca aaacgtcggg caatagcctg aaggttttta tccccttctt gcaccgtata
      541 cgtttgattt tgcccaacca gtcggcttcc ggttggtggt agcggataat caaccgccca
      601 ggcagcctgg atggcgctaa aagcgccgat aagcgtgagt gtaagcaaag acgcgcgttt
      661 cattgtaaac ctcctgtatt tgccggagac tcacgctgaa acgtcggatg gcgcttatgt
      721 tcacctgaaa ccaaaacact cctgtgcagg tcagtgtaaa cattgaccat ccggcaatgt
      781 gagccaaccg gatgaaagct gtccctttag tttagctaag tgcagcggct ttggcgcgaa
      841 ttgcgcgaat catcgcttcc agaccttgtg aacgagatgg ggtgagatgt tgggtgagcg
      901 ccattttttc aaaccacgga cgcacatcga aattgacaat atcctgcggc gtcatctgat
      961 cgtagagaat aaatacgacc gcaataagcc ctttcacaat cgccgcatcg ctgtcgccct
     1021 gcaattcaat aattccctgc gcattctggc gcatgacaat ccacacctga ttctggcagc
     1081 cctgaatgct attttgtggg cttcggtctt cgtcgcgtaa ttctggcaga cgctggccca
     1141 gctcaataat gtagagatat ttctcttccc agttggcgca gcgtaaaaaa ttacgcagca
     1201 atttttcttt atccggcaat aaagccatag tgcctccctg ttatcccagc agacggtgaa
     1261 tacgttgcag gccggtcacc agacgatcca cttcttcatg agtgttatac atggccagcg
     1321 acgcccgaca catcgcaggg acgttgtaat aggccattaa tggcatagcg cagtgatgtc
     1381 cggtacgcac agcaatgccg taattatcga gaaaactgcc aacatcatag gcgtggtgtt
     1441 taccgagatt aaaagcaata acgccaagcc tgttttgtgg gccatagaga gtgagattcg
     1501 gtacagattc cagctgtgat agcgcgtaat gcatcagatt cagttcatac tcggctatgt
     1561 tattaagccc cagcaccgaa acatattcca gcgccgcgcc aagaccaatg atgcccccgg
     1621 tattgggtgt accggcttca aaccgccatg gtgctttggt ccaggtagtg ccttcactca
     1681 ggctgacggt ggcgatcata gaaccgcccc cttcccacgg cggcatctcc tgcaacaagg
     1741 cttctttgac ataaagaatg ccaatcccgg tggggccata cagtttatgc ccggaaaaca
     1801 cgtaaaaatc gcaatccagc gcctgaacat ccaccggatg atgcatcacc gcctgagcgc
     1861 catccaccag cacttttgcg ccatgctggt gcgcaagcgt gatcattccc gccagtggat
     1921 tttctgtgcc aagcacgttg gagacatgag taattgccag caggcgagtt ttctcatcaa
     1981 acagcgtatg cagcgtctcc agttgcagcg taccgtcggg gttgagaggg atcacacgca
     2041 gctctgcgcc aacgcgtgcg caaagcatct gccaggggac aatgttagcg tggtgctcca
     2101 tctgactgat gatgatgtta tcgcccgccc gcacattgct gttgccccag ctattggcga
     2161 ccagattgat cccttccgtc gtgccgcgga cgaacaccag ctcttccgcc gaacgggcat
     2221 taataaacag cgatgcccgc ttgcgcacgt tctccatttt ctcggtcgcc tgggcgctta
     2281 aggtatgaat accgcgatgc accgccgcgt agccatgacg ataaaactcg gcctcggcgt
     2341 caatcacctg gctcggtttc tgtgcactgg cggcgctgtc gagataagcc agcggcaaac
     2401 cgtttacctc acgcgaaagc accggaaagt cggcccgcac tttgtcgacg gaaaaagtca
     2461 tcttgcacct cctggcagcc gttgaccgat tcgggccagc acctgctgtt taagcccctc
     2521 atcacgcagt gcttccgtca gttcggcagc aaaggcgtaa atgatcatct gctgggcatc
     2581 ctgctgattg atcccgcgcg agcgcagata gaacatctgt tcatcatcaa tacgccccac
     2641 cgtcgcgccg tggctgcatt tcacatcatc tgcatagatt tccagctgcg gtttcgtatc
     2701 cacttccgcc agtttgccca tcagcagatt attgttggtc atctgaccat ccgttttgat
     2761 ggcgtgctgc gcgacgttga tcaaaccgtt aaataccgcg cggcctttgt cgctgacgat
     2821 agttttgtgc aactgtcggc tgttacaaaa acctttattg tgttccagcc aggtacgggt
     2881 atcacacacc tcgtttttca ccggcatcgc caggctattg atccgcagcg tgctgttttc
     2941 gccattgagt tgcgtactgg tgttgtgtcg taacactgcg ccacccagca ggaaactatg
     3001 gctaaatgcg gtggcatcct cagccagcaa caaatcgtta tgagcaaagt ggtgactgag
     3061 cgggttttca aacgccagct tgatatgctg caagtgggcg ttcgctgcga cattgatagt
     3121 gaaccgtgcc ccggtaaaat gacgagcatc attaaggctg acaaaatgtt cgatcaccgt
     3181 tgcttcggca ccttccgcca gatccagatg atgccggtaa tgggcagtgt tcacctcttc
     3241 acctgccacg ccctgggtga tatacattaa cagcaatggc tttgccggcc gttgaccgcg
     3301 cttcacggcg atatgcgtca cgctttgtgc caggctttcc gtcaaatgca gaaacacttc
     3361 cgcctgaata gcgtcgggta acccctgacg gtcgtcgtta atgctcactt catatccgct
     3421 gccttcaatt gcatcgctca gcgcgggcac gtaacgtcca tcgacaaaca ccagccgcac
     3481 ggcgtctaac gttaacgcta aggcatcacg ctgctgtggg gatatctccc ccgcaatgct
     3541 gacaaactgg ctattggtca gcccttccag cgacgtatat ttccagtttt catgtttacg
     3601 tgtcggcagt ccggtacgca gcaattgttg taaatgctgc tgtgcttgcg gggagcgttt
     3661 tgtcccttca gcttcaaaca agtgatgcca ctgttgcagc gcgttactgc tgttcggtaa
     3721 gccagccata accctgctcc tccagttgtt tgaccaacgt gaaatcgccg gatttcacaa
     3781 ttcgtccctg atatagcaca tggacgtaat caggcttgat gtagtcgaga atgcgttggt
     3841 agtgcgtaac aatgatgaat gagcgcttgc catcacgcag ggagttcacg ccatcggcga
     3901 ccacttttaa tgcgtcaata tccagcccgg agtccgactc atcaagaatg cataactccg
     3961 gttccagcac cgccatttgc aaaatatcgt tgcgcttttt ctcgccgccg gaaaaaccaa
     4021 cgtttaccga acgggttaat aaatcttccg gcatcttcag gagagcgatt ttctcttcca
     4081 tcaaatcctg aaaatcaaag cggtcgagcg tttcctggcc gcgatagctg cgcactgcat
     4141 taagtgccgt ttgcaggaaa aactggttac tgacgcctgg aatctccacc ggatactgga
     4201 aggccataaa gatgccttcg cctgcacgat cttccggcga cagtgcaagc aaatctttgc
     4261 ctttgaactc aaccgtgccg cccgtcactt cataatcttc gcgcccggca agcgttgccg
     4321 ataaggtact tttgcccgaa ccgtttggcc ccataatggc gtgaacttcg ccgggacgaa
     4381 cggcgaggct taatccacgc aggatagctt tatcttccac gctgacgtgt aaatctttaa
     4441 tacttaacat gtttattcct tatccgacgc tgtgttcaag actgatcgcg aggagttttt
     4501 gtgcttcaac ggcaaattcc agcggcagtt ctgagaacac gtctttgcag aaaccgttaa
     4561 caatcatcga gatggcgtct tcttcgctga tcccgcgttg caggcagtaa aacagttgat
     4621 cttcaccaat acgtgatgtc gttgcctcgt gctccagttg tgcgctgtta ttgcgacatt
     4681 cgacatacgg gaaggtatgc gccccacaat tagcgccaat cagcattgag tcgcactgag
     4741 tgaaattgcg cgcattggtt gccgtcggca tgattttcac taagccgcga taactgttct
     4801 gactatgtcc ggcagagatc cctttcgaga taatggtcga tttggtgttt ttaccgatgt
     4861 ggatcatctt ggtgccggta tccgcttgct gatgaccgct ggtcagcgcc actgagtaaa
     4921 actcaccaat ggagttatcg ccgcgcaaaa tgcagctggg atatttccac gtaatcgcgg
     4981 acccggtttc tgattgcgtc catgacattt tgctgttttc gccttcgcac aaagcacgct
     5041 tggtgacgaa gttgagaata ccgccggtgt tgttatcgcc agggaaccag ttttgtaccg
     5101 tggaatattt cacctcggcg tttttatgga tgatgacttc caccactgcc gcgtgtaact
     5161 gatagctgtc acgcaccgga gcggaacagc cttcaatgta gctgacgtag ctgtcttcgt
     5221 cggccaccag aatggtgcgc tcaaactgcc cggttttttc cgcgttaatg cgaaaatagg
     5281 tggaaagttc catcgggcag cgcacgcctt taggcacata aataaacgta ccgtcagagg
     5341 ctaccgccgc attaagcgcg gcaaagaagt tgtcattccc cggcaccacg gtgccgagat
     5401 atttacgcac cagttccggg tgatcgtgga tcgcctcacc aaaggaacag aaaataattc
     5461 cctgctccgc cagtttttcg cgataagtag tggcaaccga aacagagtcg aaaatggcat
     5521 ccaccgccac ctctttgcct tcccgcacgg gaacgcccaa ctgctcaaac gccgcctcca
     5581 cctctttact taaaaaggcg ttcgcgccag tttgctgcac cgcgccaggt tcagacgcgc
     5641 aagtgtcgtc acaattaccg cacgatggtg ctgagtagta gctgtaatcc tgataattca
     5701 gcttgtcgta gtgcgctttc aaccagtgcg gttcttccat ctccagccat gcgcgatagg
     5761 cgtttagacg aaactccagc atccactccg gctcattacg cttcgccgaa attgcgcgca
     5821 ccacctcttc gtttatcccc tttgccagct catcggtggc taactgggtg aagaatcctt
     5881 ctttataatt cagcgggccg ccggtccagg ttttgacatc gtcagttgct tcagtattac
     5941 gagacatagt accgcctata ccccaaagct ttcgccacag ccacattcat tctgggcttt
     6001 agggttgtga aatttgaata tctgattaag tccttcacga acgaaatcga cttccgtgcc
     6061 atcaataaac ggcatcgctt gcagcgggac aaacagcttc gcgccgtcgt gttcaaacag
     6121 cagatcgtct ttgtccggct cgctaacact gtcgagcaca tagccaaagc ccgcgcagcc
     6181 cgtttgcttc acgcctaaac gcacgccgac catacccggc tgctttgcca ccagctcacg
     6241 gatgtgtatc gccgctgcgg gtgtcagcgt taagccttgc caggcgaaat cttgtgggtt
     6301 aaaggttcct gaatgcatgt ccatcgattt acctcacttc atcgctttca gcgtataaca
     6361 gcatgttggt gataatgatt atcagttcaa cccagcaaac gcaggggctt taccgtaaaa
     6421 catgcttttt gcctgctttt aataagcata gaccctgatg tgtgggttaa caggcacgct
     6481 aagaattagg tatctcattg ttagataatg gttattatct aaggagcatt aaggctgtga
     6541 tgaaaaagaa aaagttgtat taaaatgact atttaagaga taggtaaaaa agtgcagcgt
     6601 tcagaaataa gaaaaccctt aagtctgtgc gacacaggct taagggtttc taccccatcc
     6661 ggcgcttatc tccggcactc tcagtggctt agctcttgaa ggggcgataa gaataatctc
     6721 ataaagctaa cccgccgttt taacacaaac tgcgattagt attatttttg aacaatatca
     6781 ggcggtagat aagcagtatt aagaaggtca tcgaacctgg acggaggtta atccaggtcg
     6841 atttggcgaa cttgcggcat taagtcagga tcaatgcacg cccagacgcc aggcaaagta
     6901 gatttcttct tttaattcag cagaagagag agtaagcagg tcagcaaatt caagttctag
     6961 ttgtttcaga cgtttgagat attgggcagg tgaaagattg ctctggtcac ggcgtaaaaa
     7021 ttcaatggcc agctgggtgg gatcaagttg agtagacata gcatcctcgc ttttagacaa
     7081 gacgtgtaca gtataccacc gtttactgtg cagataatga ccaaaagcaa tatgcgtcac
     7141 acttttctgg tgacaacgtc acaaaatggc ggtcgtcaat cgtgacgaac agcacaaacg
     7201 ccctttctca tcgaagattt caatctgcca gacctggtga cgcgaaccga gatgcaacgg
     7261 tttacatatg ccgcgcaccc gcccttctcg tgccgagcgg acgtgattag cattgatttc
     7321 cagaccaacc actttttgct caccttcggt acataaataa ccggcaacgg aaccgatact
     7381 ttcggccagt accacggatg ctcctccatg cagcaacccg aaaggctgct ttgtccgcga
     7441 gtctactggc attgtcgctt caagggtgtc atcaccaata tgttcaaagc gaatatccag
     7501 gaaccccacc atgtttcctt cacccatagc attcagtgct tccagggtga ttttccgttt
     7561 ccatatcatt taataatctc cagtaaagcc tgcacaggat ggcgtacccc cgtgccttca
     7621 acccgtttta cctggctacg gcaggaatat ccggtcgcca gacagcggtt acgcggcagt
     7681 cgctgcatag cctgatgcca ggataactca tagatcccga gcgaattttc atggtttttc
     7741 gcttcatgtc cgtaagtccc tgccatgccg cagcaaccca cgctgacatt ttccagtttc
     7801 gcgccaaaac gggcaaatat cgcggcccat tgtgctggcg cacccggcaa ggcggtaact
     7861 tcggtacagt gaccaaagaa ataccatgat tcaccgctga ctgtagccac aggctgtgac
     7921 tcaagtgcgc ttgccagcca ttcattcgcc agtaagacgt taaactcgcc acgctcctcg
     7981 cccagcgcca gtttatattc atcgcgataa caaagtacca gcgccggatc gacgcccacc
     8041 attggcatac ccagcttcgc catacggttg aggaaatccg ccgtcttttt cgccgtcttc
     8101 gcaaaacgat taagaaaacc tttaatatgc tgggctttgc catttggcga aaatggcagt
     8161 aacacaggct ggaaacctaa tttttcgacc agacggacaa aatccgccac cacttgcgca
     8221 tcgtaatagc tggtaaaggg gtcctgcacc accaacactg tgcgcgcttt ctgctctgca
     8281 ttgagagatt caagctgttc cagcgtcatg tttgccgagc gatgccccac catttgttgt
     8341 tgtagcgagg ggaccgacag cagcggcaaa tcaaccatgc cgatatgttt ttccgagagt
     8401 ttgcgcacca gcggctggtt aatgaagaag ttaaaggttt tcggcgcgcg tgccatcagc
     8461 ggcgcgtagc tctcgaccgt agcgacgagg tggtcgcgca gcgggcgtaa ataacgggtg
     8521 tgatagagct gcagaaaacg agagcgaaac tccggcacat caattttgat ggggcacagg
     8581 gtcgaacacg ctttacaggc cagacagccc gacatcgcct ctttgacttc gtgtgagaag
     8641 tcatattcgc ctttattcgc atgccagcta ttgcgcgtgc gggcaattaa cgtccgcaaa
     8701 ctgacgccgg attcaggcag ttcttgttcc agtttgagtg gatcaacgcc gcgatccgcc
     8761 aacaaacgca gccattcacg caccagcgtt gcgcgccctt tcggtgaatg aatccggttc
     8821 tgggtgatct tcatcgacgg acacatcgga ctacgggcat caaagttgaa gcataaaccg
     8881 ttgccgttac actccatcgc accgcgccac tgctggcgta ccgcaatggg gatctgccga
     8941 tcgaatgtac cgcgcttcac cgcgtccact ttcatcatcg gcgcatcgag accttctggc
     9001 gggcaaatct tccctgggtt gagtcggtta tgcgggtcaa atgccgcttt cactttgcgc
     9061 agttctgcaa aaagttcctc accgaaaaac gccgggctgt attcagcgcg aaaacctttg
     9121 ccgtgctcgc cccacaacaa accaccgtat ttcgcagtca gcgccaccac gtcatcagag
     9181 atttgcttca tcaaaatctc ttgttgagga tcgcacatat ccagctctgg acggacgtgc
     9241 aagacacctg cgtcgacgtg accgaacata ccgtagctta agccgtggct gtcgagcagc
     9301 gcgcgaaatt cagcaatata atccgccagg tgttccggcg gtacgcaggt atcctcagca
     9361 aacggaattg gcttagcggc acctttggca ttgccaagca gaccaacggc ttttttgcgc
     9421 attgcataga tacgttcaac ccccgccagc tcacggcaca cctgccagcc gatgacacct
     9481 gcttgatgac tggcgatcag ctcatccaac cgcgcacaga gtgcatttac ccgctcatca
     9541 atcagcgcct catcatcacc agcaaattcc acaatgttca gcccgagcat ctcttggtca
     9601 ggcacatcgg taatcaactc gctgacggaa tgccagacaa tatcttcccg cgccagattc
     9661 agcacttttg agtccaccgt ctctaccgaa agcgcccgcg cctcaaccat aaacggcgcg
     9721 ttacgcagcg cagagtcaaa agagtcatat ttgacgttca ccagacggcg cactttaggc
     9781 aagcgcgtaa tatccagccg cgcttcggta ataaaggcca gcgtcccttc tgaacccgtc
     9841 agaatgcgcg tcaggtcgaa ctcggtcatc tcatcgttaa agacatgacg cagatcgtaa
     9901 ccggtaagaa agcggttaag tttggggaag ttgtcgataa ttaactggcg ttgctgacgg
     9961 caacgttgat aaaccgtgtt ataaattcgc ccgattgtgg tattggattt acccagcgtt
    10021 tccgccaatt cgacgggtaa aggttgcgta tcgagaacat cgccccccaa caacaccgcg
    10081 cgtacgccaa gtacgtgatc tgacgttttg ccatagacca gcgatccctg accggatgca
    10141 tcggtattga tcatcccacc gagcgttgcc cggttgctgg tcgaaagttc cggcgcaaaa
    10201 aagtagccga acggtttcag gtactgattg agttgatctt ttatcacccc ggcctcaacg
    10261 cgcacccagc cctcttcagg gttaatttcg atgatgcggt tcatatggcg ggacatatca
    10321 acaataatcc cctggttgag cgcctgaccg ttagtgccgg tgccgccgcc gcggggggta
    10381 aagatcagcg atgaatagcg ttcctgcgcg gcaagacggg cgatcagcgc cacatctgcg
    10441 gttgaacgcg gaaataccac cgcatcgggg agaagttggt aaatactgtt gtcggtcgac
    10501 attgtcagac gatcggcata acttgtcgcc gtatcgccgg taaaaccttg ttgctccagc
    10561 tcttgcaaaa aattaagcac cagttgaacg acgccgggtg cctgagaaat ctgtggaatc
    10621 attatattgc ccctttcctg cggtctgtga tgtaggtcga tacactattc tttcaggcgg
    10681 ctgcaatagc gcactgaaag gtgatgttta tttactctat ggatttcgag ttgcaggaag
    10741 gcggcaagcg agtgaactcc aggagcttac aatagtaagt gactggggtg aacgaacgta
    10801 gccgcagcac atgcaacttg aaatacgacg agtaaatcgt ttgcgtgttg cctgagttgt
    10861 tgtaccacat ttttttctaa cacgcccatc agaattaagg gcagaatcgg cctgttaaaa
    10921 accgctgaaa ttgctcatca ttatgcaggt gagtttcgcg tgttcacgtc gcgtcgacga
    10981 tttgacgcac aaaaaaggtg aaaagtagtt atggtaaatg ttcgtcagcc cagggatgtc
    11041 gcacaaattc tgctttcggt gctgttttta gccatcatga ttgtggcatg tctgtggatt
    11101 gttcaaccct ttattctcgg ctttgcatgg gccggtacgg tggttatcgc cacctggccg
    11161 gtattgttac gtttgcaaaa gatcatgttt ggccgccgct ctctcgccgt tctggtgatg
    11221 acgctgttat tagtgatggt gtttatcatc cctattgctt tgctggttaa cagtatcgtc
    11281 gacggcagcg gcccgctaat taaagccatt tccagcggcg acatgacgtt acccgatctg
    11341 gcgtggctta ataccattcc ggtgattggc gcgaagctgt atgcaggctg gcacaacttg
    11401 ctggatatgg gggggacggc gatcatggcg aaagtccgcc cttatattgg caccaccacc
    11461 acctggttcg ttgggcaggc ggcgcatatc gggcgcttta tggtgcattg tgcgctgatg
    11521 cttctcttca gtgccctgct gtactggcgc ggtgaacagg tggcacaagg cattcgccat
    11581 tttgcaaccc gtctggcagg cgttcgcgga gatgccgccg tactgctggc ggcacaggct
    11641 atccgcgcgg tggcgctggg tgtggtggtg acggcgttag tacaggcagt gcttggcggt
    11701 atcggcctcg ccgtatccgg cgtaccttat gcaacgttgc taacggtgtt aatgatcctc
    11761 tcctgccttg tccagcttgg cccgttgccg gtactgattc cggcgattat ctggctctac
    11821 tggactggcg ataccacctg gggaacggta ttgttagtgt ggagcggtgt ggttggcacg
    11881 ctggataacg tcatccgccc aatgttaatt cgcatgggtg ccgatttacc gctgatcctg
    11941 atcctctctg gtgttattgg tggtttgatt gctttcggga tgatcggtct gtttattggt
    12001 ccggttctgt tagccgtttc ctggcgtctg tttgccgcgt gggtggaaga agtcccgccg
    12061 ccgacggacc aaccggaaga aattctcgaa gaacttggcg aaatcgagaa accgaataag
    12121 taatttctca tcaggcggct ctgccgcctg attgttaacc cccgctaatt gatatttgct
    12181 tgctcttccc catattttcc tgcttaccgc cattcagctg gtagtacctg tcgcaaattc
    12241 tttacagttt ttaaactaat gagacgaatc tgatcgacgc aaaaagtccg tatgcctact
    12301 attagctcac ggttataaat caacatattg atttataagc atggaaatcc cctgagtgaa
    12361 acaacgaatt gctgtgtgta gtctttgccc atctcccacg atgggctttt ttttaacatt
    12421 tttccacttc gctacctcgc ccctcactct ttccaataat gttgcacaag atactgtgac
    12481 tctcttcaag ccgtcagcag gctgataatg ttatttatat tttattgttt atttcatgca
    12541 gccattacac gatgaacgct tatgaactcc aggcactccg acatattttt gccatgacta
    12601 ttgatgaatg cgcacctgga ttgcccagac cggtgacagt gaaagctggc gtcagtggga
    12661 aaatggcaag tgtgccattc ctgatcgtgt agtcgagcaa ctgttggcta tgcgtcagca
    12721 aagaaaaaaa catcttcatg ccatcataga gaaaataaat aaccgcatcg gcaacaacac
    12781 catgcgtttt ttccccgact taaccgcatt tcaacgagtc taccctgatg gcaattttat
    12841 tgactggaag atctatcaat cggtagccgc tgaaggtaat gctgttgaaa agcaaattcc
    12901 ccagccagtt ggtggacgcc agcgtagcta atgaattacc gcaaatgaac agcaaaccgt
    12961 tagtctggct ggaaggtgtt tcatcggtac tgttcggtgt agccgcattc tcgacctttt
    13021 atgtgattgt ggtgtggatg cccaaatatg cgatggcttt tgctggtatg tcagaagctg
    13081 aggcattaaa aaccatctct tattacagta tgggctcgtt ggtctgtgtc tttatttttg
    13141 ccgcactact gaaaaaaatg gtccggccca tctgggctaa tgtatttaac tctgcactgg
    13201 caacaataac agcagccatt atctatctgt acccttctcc actggtgtgt aatgccggcg
    13261 cctttgttat cggtttctca gcagctggcg gcattttaca gctcggtgtt tcggtcatgt
    13321 cagagttttt cccaaaaagc aaagccaaag tcaccagtat ttatatgatg atgggtggac
    13381 tggctaactt tgttattccg ctgattaccg gttatctgtc gaacatcggc cttcaatata
    13441 tcattgttct cgattttact ttcgcgctgc tggccctgat taccgcaatt attgttttta
    13501 tccgctatta ccgcgttttt attattcctg agaatgatgt gcggtttggc gagcgtaaat
    13561 ttagcacccg gttaaacaca attaagcata gaggttaaag gagttaatta tggatgttac
    13621 cgcaaaatac gaattgattg ggctgatggc ctatcctatc cgccacagtt tatcgcctga
    13681 aatgcagaat aaagccttag aaaaagcggg attgccattt acctatatgg cctttgaagt
    13741 ggataacgat agttttcccg gagcaattga aggattaaaa gctctaaaaa tgcgcggaac
    13801 tggtgtatca atgccgaaca aacaactggc ttgttaatat gttgatgaat taacgccagc
    13861 agccaaactg gtgggtgcca tcaacaccat cgttaatgat gatggctacc tgcgcggcta
    13921 taacaccgac ggcacgggcc atattcgcgc cattaaagag agcggttttg atatcaaagg
    13981 caaaacaatg gtgctgttag gggccggagg tgcctcaacg gctattggcg cgcagggggc
    14041 aattgaaggt ttaaaagaaa ttaaactctt taaccgtcgg gatgagttct tcgataaagc
    14101 cctcgccttc gcgcagcggg ttaacgaaaa caccgattgt gtcgtcacgg ttaccgatct
    14161 cgccgatcag caagcctttg ctgaagccct ggcttccgcc gacattttaa ccaatggcac
    14221 aaaagtgggt atgaaacccc ttgagaatga atcattagtt aatgatatca gtctgttaca
    14281 tccgggactt ctggtcactg aatgcgtgta taacccgcat atgacgaagt tattgcagca
    14341 ggcgcaacaa gctggttgca aaacgattga tggatacggc atgttgttgt ggcaaggggc
    14401 tgaacagttc acgttatgga ctggcaaaga tttccctctg gaatatgtta aacaggtcat
    14461 ggggttcggt gcctgacagg ctgaccgcgt gcagaaaggg taaaaaaatg aaaaccgtaa
    14521 ctgtaaaaga tctcgtcatt ggtacgggcg cacctaaaat catcgtctcg ctgatggcga
    14581 aagatatcgc ccgcgtgaaa tccgaagctc tcgcctatcg tgaagcggac tttgatattc
    14641 tggaatggcg tgtggaccac tttgccgacc tctccaatgt ggagtctgtc atggcggcgg
    14701 caaaaattct ccgcgaaacc atgccagaaa aaccgctgct gtttaccttc cgcagtgcca
    14761 aagaaggcgg cgagcaggcg atttccaccg aggcttatat tgctctcaat cgtgcagcca
    14821 tcgacagcgg cctggttgat atgatagatc tggagttatt taccggcgat gatcaggtta
    14881 aagaaaccgt cgcctgcgcc cacgcgcatg atgtgaaagt tgtcatgtcc aaccatgact
    14941 tccataaaac gccggaagcc gaagaaatca ttgcccgtct gcgcaaaatg cagtccttcg
    15001 acgccgatat tcctaagatt gcgctgatgc cgcaaagtac cagcgatgtg ctgacgttgc
    15061 ttgccgcgac cctggagatg caggagcagt atgccgatcg tccaatcatc acaatgtcaa
    15121 tggcaaaaac tggcgtaatt tctcgtctgg ctggtgaagt atttggctcg gcggcaactt
    15181 ttggtgcggt aaaaaaagcc tctgcgccag ggcaaatctc ggtaaatgat ttacgcacag
    15241 tattaactat tttacatcag gcataagcaa taatatttcg gcgggaatat cctcccccgc
    15301 cgaactaaaa aaaatatatt caaccgtatt taataaaaat atttcgtgag tctctgtgcg
    15361 ctaaatatcc atctggcgta gggaaaatca cacctgaatc agaaattaac aatgaaacct
    15421 gtaaaaccac ctcgtattaa tggacgagtg ccggtcctgt cggcacagga agcggtgaat
    15481 tatattcccg acgaagcaac actttgtgtg ttaggcgctg gcggcggtat tctggaagcc
    15541 acgacgttaa ttactgctct tgctgataaa tataaacaga ctcaaacgcc acgtaattta
    15601 tcgattatta gtccaacagg gcttggcgat cgcgccgacc gtggtattag tccgctggcg
    15661 caagaaggtc tggtgaaatg ggcattatgt ggtcactggg gacaatcgcc gcgtatttct
    15721 gaactcgcag aacaaaataa aattattgct tataactatc cacaaggtgt acttacacaa
    15781 accttacgcg ccgccgcagc ccaccagcct ggtattatta gtgatattgg catcgggaca
    15841 tttgtcgatc cacgccagca aggcggcaaa ctgaatgaag tcacgaaaga agacctgatt
    15901 aaactggtcg agtttgataa caaagaatat ctctattaca aagcgattgc gccagatatc
    15961 gccttcattc gcgctaccac ctgcgacagt gaaggctacg ccacttttga agatgaggtg
    16021 atgtatctcg acgcattggt tattgcccag gcggtgcaca ataacggcgg tattgtgatg
    16081 atgcaggtgc agaaaatggt taagaaagcc acgctgcatc ctaaatctgt ccgtattccg
    16141 ggttatctgg tggatattgt ggtggtcgat ccggatcaaa gccaactgta tggcggtgcg
    16201 ccggttaacc gctttatttc tggtgacttc acccttgatg acagcaccaa acttagcctg
    16261 cccctaaacc aacgtaaatt agttgcgagg cgtgcattat tcgaaatgcg taaaggcgcg
    16321 gtggggaatg tcggcgtcgg tattgctgac ggtattggcc tggtcgcccg ggaagaaggt
    16381 tgtgctgatg actttattct gacggtagaa acaggtccga ttggcggaat tacttcacag
    16441 gggatcgcct ttggcgcgaa cgtgaatacc cgtgccattc tggatatgac gtcccagttt
    16501 aatttttatc acggtggtgg tctggatgtt tgttatttga gttttgctga agtcgaccag
    16561 cacggtaacg tcggcgtgca taaattcaat ggcaaaatca tgggtaccgg tggatttatt
    16621 gatatcagtg ccacctcgaa gaaaattatt ttctgcggca cgttaaccgc gggcagttta
    16681 aaaacagaaa ttgccgatgg caaattaaat atcgtccagg aaggacgggt gaagaaattt
    16741 attcaggaac taccggaaat tacttttagc ggaaaaatcg cgctcgaacg ggaactggat
    16801 gttcgttaca tcaccgaacg tgctgtattc acgctgaaag aagacggcct gcatttaatc
    16861 gaaatcgccc ctggcgtcga tttacaaaaa gatattctcg acaaaatgga tttcacccca
    16921 gtgatttcgc cagaactcaa actgatggac gaaagattat ttatcgatgc ggcgatgggt
    16981 tttgtcctgc ctgaagcggc tcattaacag gagtatcacg atggattttt ctttaactga
    17041 agaacaagaa ctgctgctgg ccagtattcg cgaactgatt acgactaact ttgcggaaga
    17101 gtatttccgc acctgcgatc aaaacgggac atatccgcgt gagtttatgc gggcgctggc
    17161 ggataacggc atttctatgc ttggcgtgcc ggaagagttc ggtggcatcc ctgcggatta
    17221 cgtcacccag atgctggcgc tgatggaagt gtcaaaatgc ggtgctccgg catttttgat
    17281 taccaacggt caatgtattc acagtatgcg ccgtttcggt tctgcagagc agctacgtaa
    17341 aacggcagag agcaccctgg aaacgggtga tcccgcctat gccctggcgt tgacggagcc
    17401 aggcgcaggc tcagacaaca acagtgccac taccacttac acgcgtaaaa acggcaaggt
    17461 ttacatcaac ggacagaaaa cctttattac cggtgcgaaa gagtacccgt atatgctggt
    17521 gttggcgcgc gatccgcaac cgaaagatcc caaaaaagcc ttcaccctgt ggtgggtcga
    17581 ctccagtaag cccggcatta agattaaccc gctgcataaa atcggctggc atatgctcag
    17641 cacctgcgaa gtctatctcg acaacgtgga ggttgaagag agcgacatgg tgggcgaaga
    17701 aggaatgggt ttcctcaatg tgatgtacaa ctttgagatg gagcgcctga tcaacgccgc
    17761 gcgcagcacc ggctttgccg aatgcgcctt tgaagatgcc gcccgctatg ccaaccaacg
    17821 tatcgctttt ggtaagccca ttggtcataa ccagatgatc caggaaaaac tggcgctgat
    17881 ggcgattaag atcgacaaca tgcgcaacat ggtgctgaaa gtggcatggc aagccgatca
    17941 gcatcagtca ctgcgcacca gcgcggcgct ggcaaaactg tattgcgcac gtaccgcaat
    18001 ggaagtcatt gatgatgcga ttcaaatcat gggcggtctg ggctataccg atgaagcgcg
    18061 cgtctcccgc ttctggcgtg atgtccgttg tgaacgtatc ggcggcggta cagacgaaat
    18121 tatgatttac gtagcaggtc ggcagatcct gaaagactat cagaacaaat aatctgcagg
    18181 cggcgcagct tcttaacaaa ctgcgccgcc agatttatcc aacaagactt accggttgag
    18241 gaaattcaga taggatttct tgttccgcaa aacagttttt aaattgtcta cggtaatcgc
    18301 tgggcgaaca accgacatgg cgcaaaaaca gtttggcaaa gtgatcgaca ttttcataac
    18361 ccacacgcca ggagatctct gcctgtgata attcagtatt agtgagtgac cattttgctt
    18421 ccgtcatacg ccgttgaata acatagttaa taggggaaat acgatactct ttggtaaatt
    18481 catggcaaat ataactgacg ctggcacgaa attttttcga taactgttct aaagtgattt
    18541 tttcgcgata attattactc agatagaaaa gaatatcttt tatcagaaca tcttttttaa
    18601 tatacccctg ctccgaacga taagcatttt taaaattttc gtagtaaaga atggctaacg
    18661 tataggcaaa tgcatcccat aacgaagatg tttggctatt tttactttgc ggcaaaatca
    18721 cacttagctc attaaataag gtttttatga cttcttttcc ctgccccgcg gcaattaccg
    18781 gacaagaatg cggttgcagt agctgatttt cctcagcccc ctgaaactga aagccgtaca
    18841 gcgcacaggt acacgtcgtt gccggatcgt taacgtcaga ggccaccgca tgcagcctgc
    18901 cgcgttctat caccacaatg tcatccgcat gtgcgacata taacgaagaa tcgatggtaa
    18961 accttgcaac ccctttcttg acgtaaatca actcggtttc attgtcatga acgtgatgtc
    19021 cggactccca ttttggatca tcgctaaatg caaaacgtga aagccgtggc gttttaccgg
    19081 cgacaaacag cgtttcactg gcgttatcaa aacagcgttg atacatgaca acctccctat
    19141 tccatgagca agcaaaaaca atatatgccg gataaaatac ggcgtgtatt gcggttatac
    19201 aaccgcgttt agcgagagct aaacaagatt atttacactg aatgcaagat tgtacggtca
    19261 tggaataact atattgccgc aaattgcact tttgttttag cgatcgcatt tttttgcaag
    19321 attgttggca aggaaaacag cttgctccgt cgaaaacccc caccgctatc gcacactatt
    19381 ttcaggccat ttttaccttc catcggagat ggttccgtat gcgactcaca ggagaaatca
    19441 tgaaaataat aacctgcttt aagctggtgc ctgaagaaca ggacattgtt gtcactccag
    19501 aatacaccct gaatttcgac aatgccgacg ccaaaatcag ccagttcgat ctcaatgcca
    19561 ttgaagctgc aagccagctc gcaacagatg acgatgagat agccgcgctg accgttggcg
    19621 gctcattgtt gcagaactcg aaagtgcgca gtgcgcaaag atgtgctatc ccgcgggccg
    19681 cacagcctgt atttggtgca ggatgcgcaa cttgaacatg cactgcctct cgataccgca
    19741 aaagcgctgg cggcagcaat tgaaaagatc ggcttcgatt tactgatctt tggtgaaggt
    19801 tccggcgacc tttatgccca gcaggttggc ttgctggtcg gagaaattct gcaacttccg
    19861 gtgattaatg cagtgagtgc tattcagcgt cagggtaata cactggtgat tgaacgcacg
    19921 cttgaagatg atgttgaagt tattgaactc tctgttccag ccgtgctctg cgtcacctcc
    19981 gatattaacg tgccacgcat tccttcgatg aaagccattc tcggcgcggg taaaaaaccg
    20041 gtaaatcagt ggcaggcaag tgatattgac tggagccaga gcgcgccact tgctgaactg
    20101 gtcggcattc gcgtaccgcc gcaaacagaa cgtaagcaca tcattatcga taacgattcg
    20161 ccggaggcca ttgccgagct ggcggaacat ctgaagaaag ccctgaactg aagcctacgg
    20221 agaagaaacg atgagtcaat taaacagcgt ctgggtcttt agcgataatc ctgaacgtta
    20281 tgctgaactg tttggcggcg ctcagcaatg gggccaacag gtgtatgcca ttgtacaaaa
    20341 taccgaccag gcgcaggcag ttatgcctta tggtccaaaa tgtatttatg ttcttgagca
    20401 aaacgacgcg ctgcaacgca ctgaaaatta cgccgaaagc attgctgccc cgctgaaaga
    20461 taaacacccc gctatgttgc tgttggtcgc gacgaaacgt ggtaaagctc tggcagcacg
    20521 gttaagtgtg caactgaatg cggcgctggt gaacgatgcc acggcggtgg atattgtcga
    20581 tggtcacatt tgcgccgaac accggatgta tggcgggtta gcgttcgctc aggaaaagat
    20641 caacagcccg ctggcgatca ttacccttgc acccggtgtt caggaaccgt gcaccagtga
    20701 tacctctcat cagtgcccga cagaaacggt accttatgtt gctccgcgtc atgaaattct
    20761 ctgtcgcgaa cgccgtgcga aagccgcaag cagcgtggac ctgagcaaag caaaacgtgt
    20821 ggttggcgtc ggtcgtggtc tggcggcgca ggatgacctg aaaatggtcc acgaactggc
    20881 ggcggtgctg aatgctgaag tcggctgttc acgtccaatt gccgaaggcg agaactggat
    20941 ggagcgtgaa cgttatatcg gtgtctccgg cgtgttgctg aaatccgatc tctacctgac
    21001 gctggggatc tccgggcaga tccagcatat ggttggcggc aacggcgcaa aagtgattgt
    21061 cgccatcaat aaagataaaa atgcgccaat cttcaattat gccgactacg gtctggtggg
    21121 cgatatctac aaagtcgtcc ctgccctgat tagccagttg agccgctaat tcccctttca
    21181 accacatctc ccgctgtaaa cgcagcggga agggagcata acgcatgtcg gatgacaaat
    21241 ttgatgccat tgtggtcggt gcggacgttg ctagtagcgt tgccgcactg gtcatggcgc
    21301 gagccggact ggatgtcctg gtgatagaac gcggcgacag tgccggatgt aaaaacatga
    21361 ccggcgggcg tctttatgcc cacacacttg aagcaatcat tccaggcttt gcagtatcag
    21421 cgccggtaga acgcaaggtc acacgcgaga aaatctcctt cttaaccgaa gaaagcgccg
    21481 ttaccctcga ttttcaccgc gagcaaccag atgttccgca acacgcatct tataccgtat
    21541 tgcgtaatcg tctggacccg tggttgatgg aacaagccga gcaggcgggc gcacagttta
    21601 tcccgggcgt tcgcgtcgat gcgttggttc gtgaaggaaa caaggtcact ggcgtgcagg
    21661 ccggggatga tattctccaa gcgaatgtgg tggttctagc tgatggcgta aactcgatgc
    21721 ttggccgctc gctgggaatg gttcccgctt ccgatccgca tcattacgct gttggtgtta
    21781 aagaggttat tggcctcaca ccagaacaga tcaacgatcg ctttaatatt acgggcgagg
    21841 aaggtgccgc ctggctgttt gccggctccc cttctgacgg cctgatgggc gggggatttc
    21901 tctataccaa caaggattcc atatccttgg ggctggtttg tggattgggt gatatcgccc
    21961 atgcgcaaaa aagcgtgccg caaatgctgg aagattttaa acaacacccc gccattcgcc
    22021 cactaattag cggcggcaaa ctgcttgaat attccgcgca tatggtgcca gaaggcggtc
    22081 tggcaatggt gccgcagatg gttaacgatg gcgtgatgat cgttggtgac gccgcaggct
    22141 tctgcctgaa tttgggtttt acagttcgtg gcatggattt agccattgca tcggctcagg
    22201 ctgccgccac aacggtgatc gccgccaaag aacgcgagga tttctccgcc agcagtctgg
    22261 cgcaatacaa acgtgagctg gaacaaagct gcgtcatgcg cgatatgcag catttccgca
    22321 agatcccggc gctgatggaa aacccgcgcc tgtttagcca atactcacga atggtcgccg
    22381 acatcatgaa cgagatgttc accattgacg gcaaaccaaa ccagccggta cgcaaaatga
    22441 tcatgggaca cgcgaagaaa attgggctga tcaacttgct gaaagatggc attaagggag
    22501 caaccgcgct atgagccaga acgctacggt taacgtcgac atcaaattag gcgtcaataa
    22561 attccatgtt gatgagggcc acccgcatat cattctggcg gcaaatcccg atatcaatga
    22621 attccgtaaa ttaatgaaag cttgccctgc cggactttat aagcaggatg acgccggcaa
    22681 cattcatttc gattccgccg gttgtctgga gtgcggcacc tgtcgggtgc tgtgcggcaa
    22741 cactattctc gaacagtggc aatatcccgc aggcaccttc ggtattgatt ttcgctacgg
    22801 ctaatcatgc atcccacagg cccgcatctc gggcctgatg ttctgtttcg agagtccaaa
    22861 atgaaagtga cattaacgtt caacgaacaa cgtcgtgcgg cgtatcgtca gcaagggtta
    22921 tggggcgatg cttcactggc cgattactgg cagcagaccg ctcgtgcgat gccagacaaa
    22981 attgccgtgg tcgacaatca tggtgcaacg tacacctata gcgcgctcga tcacgccgcg
    23041 agctgtctgg caaactggat gttagcgaag ggtattgaat caggcgatcg catcgcattt
    23101 caactgcctg gctggtgtga atttaccgtt atctatcttg cctgcctgaa aatcggtgcg
    23161 gtttccgtgc cgctgttgcc ttcctggcgg gaagcagaac tggtgtcggt gctcaataag
    23221 tgtcaggcaa aaatgttctt tgcaccgacg ttgtttaaac aaacacgtcc ggtagattta
    23281 atcctgccgc tgcaaaatca gcttccacaa ctacaacaaa ttgtcggcgt ggacaaactg
    23341 gctcccgcca cctcttccct ctcattaagt ccgattatcg ccgacaatac ctcactgacc
    23401 acggcgataa cgacccacgg cgatgaatta gctgcggtgc tgtttacctc cggaaccgag
    23461 ggtctgccaa agggcgtgat gctaacgcat aacaatattc tcgccagtga gcgggcttat
    23521 tgcgcgcgac tgaatctgac ctggcaggat gtctttatga tgcctgcgcc acttggtcac
    23581 gcaacgggct ttctgcatgg cgtaacggca ccattcttaa ttggcgctcg cagcgtgttg
    23641 ttagatattt tcactcctga tgcgtgtctc gcgctgcttg agcagcagcg ttgcacctgt
    23701 atgctaggcg caacgccgtt tgtctatgat cttttgaatg tactagagaa acaacccgcg
    23761 gacctttcag cgctgcgttt ctttctttgc ggcggtacca caatccccaa aaaagtggca
    23821 cgtgaatgcc agcagcgcgg cattaaatta ttaagtgttt atggttccac agaaagttcg
    23881 ccgcatgcgg tggtgaatct cgatgatcct ttgtcgcgct ttatgcacac cgatggttac
    23941 gctgccgcag gtgtagagat taaagtggtc gatgacgcac gcaagacctt accgccaggt
    24001 tgcgaaggtg aagaagcctc gcgtggcccc aatgtgttta tggggtattt tgatgaacct
    24061 gaattaaccg cccgtgcgct ggacgaagaa ggctggtatt gcagcggcga tctctgccgt
    24121 atggatgagg ctggctatat aaaaattacc ggacgcaaaa aagatattat tgtccgcggc
    24181 ggcgaaaata ttagcagccg tgaagtggaa gatattttat tgcagcatcc taaaattcac
    24241 gatgcctgtg tggttgcaat gcccgatgaa cgtttaggtg aacgatcatg cgcttatgtc
    24301 gtgctgaaag cgccgcatca ttcattatcg ctgga
//
LOCUS       DADMIB010000053        24061 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.053, whole genome shotgun sequence.
ACCESSION   DADMIB010000053 DADMIB010000000
VERSION     DADMIB010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24061
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.053"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            324..551
                     /gene="feoA"
                     /locus_tag="JNZ89_001961"
     CDS             324..551
                     /gene="feoA"
                     /locus_tag="JNZ89_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter A"
                     /protein_id="HAY8935857.1"
                     /translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAP
                     LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
     gene            568..2889
                     /gene="feoB"
                     /locus_tag="JNZ89_001962"
     CDS             568..2889
                     /gene="feoB"
                     /locus_tag="JNZ89_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HAY8935858.1"
                     /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
                     FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
                     YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
                     LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
                     AGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
                     IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDW
                     LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
                     SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
                     GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
                     KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
                     NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSL
                     KDTFSLSVLMNPIEASKGNGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
                     AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIG
                     LLRRARSRVDIELLATRKSVSSCCAASTTGDCH"
     gene            2889..3125
                     /gene="feoC"
                     /locus_tag="JNZ89_001963"
     CDS             2889..3125
                     /gene="feoC"
                     /locus_tag="JNZ89_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-S]-dependent transcriptional repressor FeoC"
                     /protein_id="HAY8935859.1"
                     /translation="MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMG
                     KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
     gene            3328..4206
                     /gene="rpnA"
                     /locus_tag="JNZ89_001964"
     CDS             3328..4206
                     /gene="rpnA"
                     /locus_tag="JNZ89_001964"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnA"
                     /protein_id="HAY8935860.1"
                     /translation="MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKT
                     LKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
                     MQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
                     VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMGCLLSSGYANDRQIKGLFNYILQ
                     TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDI
                     MRFTGVSEEELAAASQ"
     gene            complement(4235..5005)
                     /gene="bioH"
                     /locus_tag="JNZ89_001965"
     CDS             complement(4235..5005)
                     /gene="bioH"
                     /locus_tag="JNZ89_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709189.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HAY8935861.1"
                     /translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
                     VDLPGFGRSQGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
                     VTVASSPCFSARDDWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
                     LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVPMPFLRLYGYLDGLVPRKVVPML
                     DKLWPRSKSYIFAKAAHAPFISHPVEFCHLLVALKQRV"
     gene            5043..5726
                     /gene="gntX"
                     /locus_tag="JNZ89_001966"
     CDS             5043..5726
                     /gene="gntX"
                     /locus_tag="JNZ89_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417872.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein GntX"
                     /protein_id="HAY8935862.1"
                     /translation="MLTVPGLCWLCRMPLALGHWGICSVCSRAARTDKTLCPQCGLPA
                     THSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVL
                     HARRTTGLQLPDRIISVPLWQRRHWRRGFNQSDLLCQPLSRWLHCRWDSEAVTRTRAT
                     ATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATV
                     QVWCLCRTL"
     gene            5785..6360
                     /gene="nfuA"
                     /locus_tag="JNZ89_001967"
     CDS             5785..6360
                     /gene="nfuA"
                     /locus_tag="JNZ89_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016942932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HAY8935863.1"
                     /translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
                     PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
                     DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
                     EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
     gene            6721..8037
                     /gene="gntT"
                     /locus_tag="JNZ89_001968"
     CDS             6721..8037
                     /gene="gntT"
                     /locus_tag="JNZ89_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HAY8935864.1"
                     /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
                     KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
                     LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
                     TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
                     MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
                     FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
                     SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSH
                     VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI"
     gene            complement(8082..10166)
                     /gene="malQ"
                     /locus_tag="JNZ89_001969"
     CDS             complement(8082..10166)
                     /gene="malQ"
                     /locus_tag="JNZ89_001969"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HAY8935865.1"
                     /translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
                     TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPT
                     KLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
                     IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
                     VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
                     QMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFC
                     EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
                     YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
                     MSMLRLWWIPYGETADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGK
                     LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGDLTLGKT
                     LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
                     IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLETMFADDGVNKLLKD
                     LDRRRRAAAKKQ"
     gene            complement(10176..12569)
                     /gene="malP"
                     /locus_tag="JNZ89_001970"
     CDS             complement(10176..12569)
                     /gene="malP"
                     /locus_tag="JNZ89_001970"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HAY8935866.1"
                     /translation="MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALA
                     EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQEVQDSLKAYDINLTDL
                     LEEEIDPALGNGGLGRLAACFLDSMATIGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
                     DWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
                     RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
                     CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAW
                     AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
                     VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
                     GITPRRWIKQCNPALAALLDKLLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
                     VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
                     RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLQDYCVSAAEKLIP
                     AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEISEKVGEENIFIFGHTVE
                     QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
                     VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
     gene            13181..15886
                     /gene="malT"
                     /locus_tag="JNZ89_001971"
     CDS             13181..15886
                     /gene="malT"
                     /locus_tag="JNZ89_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HAY8935867.1"
                     /translation="MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYG
                     KTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIATVQQATNGHCAICETMAQKRQY
                     ASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSR
                     NLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGW
                     ATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAI
                     LRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQW
                     ELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSL
                     LEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREGTMHAE
                     FNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSL
                     ALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL
                     PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGD
                     LDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA
                     NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQ
                     AGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRI
                     LREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQI
                     AGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKLLKMMGYGV"
     gene            complement(15929..16945)
                     /gene="rtcA"
                     /locus_tag="JNZ89_001972"
     CDS             complement(15929..16945)
                     /gene="rtcA"
                     /locus_tag="JNZ89_001972"
                     /EC_number="6.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HAY8935868.1"
                     /translation="MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAK
                     PGLLRQHLTAVKAAAEICRATVEGAELGSQRLVFRPGAVRGGEYRFAIGSAGSCTLVL
                     QTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFY
                     PAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSL
                     HEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLAS
                     PAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFGLIETDGVTR
                     VSIE"
     gene            complement(16949..18175)
                     /locus_tag="JNZ89_001973"
     CDS             complement(16949..18175)
                     /locus_tag="JNZ89_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HAY8935869.1"
                     /translation="MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIA
                     VMPDVHLGKDSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQA
                     IETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
                     GTLGTGNHFIKICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRD
                     LAYFMEGTEYFDDYLKAVAWAQLFASLNRDVMMENVVTALQSITQKTVRQPQTLAMEE
                     INCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
                     CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMTAQSD
                     LVEVIYTLRQVVCVKG"
     gene            18364..19962
                     /locus_tag="JNZ89_001974"
     CDS             18364..19962
                     /locus_tag="JNZ89_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-dependent transcriptional regulator"
                     /protein_id="HAY8935870.1"
                     /translation="MRKTVAFGFVGTVLDYAGRGSQRWSKWHPTLCLCQQESLVIDRL
                     ELLHDARSCSLFETLKRDIASVSPETEVVSIEIELHNPWDFEEVYACLHDFARGYKFQ
                     PEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQTSPPRKKEQPRGAGEVTIIDLD
                     LSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTG
                     AGKSFLARRIFELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREG
                     LLRSANGGMLFFDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDL
                     RQLVAEGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHATLTGDSVRFNTE
                     ARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
                     RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSAAGRQLFDVSRQGKASVNDA
                     DRLRKYLARFGLTWEAVQDQHSSS"
     gene            complement(19944..20702)
                     /locus_tag="JNZ89_001975"
     CDS             complement(19944..20702)
                     /locus_tag="JNZ89_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HAY8935871.1"
                     /translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
                     EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
                     PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
                     SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
                     MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
     gene            complement(20719..21549)
                     /gene="glpG"
                     /locus_tag="JNZ89_001976"
     CDS             complement(20719..21549)
                     /gene="glpG"
                     /locus_tag="JNZ89_001976"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease
                     GlpG"
                     /protein_id="HAY8935872.1"
                     /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQ
                     AERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVVMI
                     ACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWY
                     LGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
                     PQSGIYLQRGLIIFALIWIIAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK
                     "
     gene            complement(21594..21920)
                     /gene="glpE"
                     /locus_tag="JNZ89_001977"
     CDS             complement(21594..21920)
                     /gene="glpE"
                     /locus_tag="JNZ89_001977"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HAY8935873.1"
                     /translation="MDLFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
                     NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
                     EVAYGA"
     gene            22110..23615
                     /gene="glpD"
                     /locus_tag="JNZ89_001978"
     CDS             22110..23615
                     /gene="glpD"
                     /locus_tag="JNZ89_001978"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HAY8935874.1"
                     /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
                     SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
                     IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
                     RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGM
                     HLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYK
                     GDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDY
                     TLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIE
                     GDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAE
                     LKYLVDHEWVRRTDDALWRRTKQGMWLNADQQSRVSQWLVEYTQQKLSLAS"
     gene            complement(23667..>24061)
                     /locus_tag="JNZ89_001979"
     CDS             complement(23667..>24061)
                     /locus_tag="JNZ89_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935875.1"
                     /translation="VMAGIGWQFSRRTPPELKNRLHCWLVFSPVYFWLILSNFILYIS
                     PEKSALLENIRNFFLTFVWPPLNFSPFWPQPWTDFVGPISAQLGFALGYYCHWCRKNR
                     NQRKKWGDWVTCLSLAILAQGPLFNYLQ"
BASE COUNT         5656 a         6553 c         6082 g         5770 t
ORIGIN      
        1 accaaactca taatatattc cggcaatatt tatcacttca ttaacaactg aaaccttaat
       61 taaacattag ccagtccggg taattcacta ttcgaattat attttcgctg cgatataacc
      121 ttgagccaca tcaacattga gtcagattat tattcaaacc aacattcgca cacattttaa
      181 gtattgctga tagaaaccat tctcattatc attgtgttat tgattattta atctctcctt
      241 tgttggcaaa tcatctggtc tcatgtcgct gtcaaacgcc ccatgaggta gttatccagt
      301 taatgagaaa caagtaggca cctatgcaat acactccaga tactgcgtgg aaaatcactg
      361 gcttttcccg tgaaatcagc ccggcatatc gccaaaaact gctttctctt ggcatgttac
      421 ctggctcctc ttttaatgtg gtgcgcgtcg ctccactcgg cgaccccatt catatcgaaa
      481 cccgtcgtgt gagcctggta ttacgcaaaa aagatctggc cttattagaa gtggaagcgg
      541 tttcctgtta atacggtgat aacaacaatg aaaaaattaa ccataggctt aattggtaat
      601 ccaaattctg gcaagacaac cttatttaac cagctcactg gcgcacgtca gcgtgtaggt
      661 aactgggctg gcgttaccgt cgaacgtaaa gaagggcaat tctccaccac cgatcatcag
      721 gtcacgctgg tggacctacc cggcacctat tctctgacca ccatctcatc gcagacctcg
      781 ctcgatgagc aaatcgcctg tcactacatt ttgagtggcg acgccgacct gctgattaac
      841 gtggtggatg cgtctaacct tgagcgtaac ctgtacctga cgctacaact gctggaactc
      901 ggcattccct gcattgtggc actgaacatg ctcgacattg ccgagaagca aaatattcgt
      961 attgaaattg atgctctgtc ggcgcgtctg ggctgtccgg tgatcccgct ggtttcaacc
     1021 cgtggtcgcg gtattgaagc gctcaagctg gcgattgatc gctataaagc taacgagaat
     1081 gtggaactgg tgcattacgc acagccgctg ctcaacgaag cagattcact ggcaaaagtg
     1141 atgccttccg acatcccgct gaaacaacgt cgctggctgg gcctgcaaat gctggaaggc
     1201 gatatctaca gccgcgccta cgccggtgaa gcgtcgcagc atctggatgc cgccctcgcc
     1261 cgtctgcgta atgagatgga cgatccggcg ctgcacattg ccgatgcgcg ttaccagtgc
     1321 attgctgcca tctgtgatgt ggtaagcaac accctgacgg cagaacccag ccgtttcacc
     1381 actgcggtag ataaaatcgt gctcaaccgt ttcctcggtc tgccgatttt cctctttgtg
     1441 atgtacctga tgttcctgct ggctatcaac atcggcgggg cgttacagcc gctgtttgac
     1501 gtcggctccg tggcgctatt tgtgcatggt attcaatgga ttggctacac gctccacttc
     1561 ccggactggc tgactatctt cctcgcccag ggcctgggtg gcggcattaa caccgtgctg
     1621 ccactggtgc cgcagattgg catgatgtac ctgttcctct ccttccttga ggactccggg
     1681 tatatggcgc gtgcggcgtt tgtgatggac cgtctgatgc aggcgctggg cttgccgggg
     1741 aaatcctttg tgccgctgat cgtcggtttc ggttgtaacg taccgtcggt aatgggtgca
     1801 cgtacgcttg atgcaccgcg tgaacgtctg atgaccatca tgatggcacc gtttatgtcc
     1861 tgcggcgcgc gtctggctat cttcgcagta ttcgcggctg ccttcttcgg gcagaacggt
     1921 gcgctggcgg tcttctcgct gtatatgctg ggtattgtga tggcggtgct gactggcctg
     1981 atgctcaagt acaccatcat gcgcggtgaa gcgacgccgt ttgtcatgga gttgccggtc
     2041 tatcatgtac cacacgttaa aagcctgatt atccagacct ggcagcgtct gaaaggcttc
     2101 gttctgcgtg ctggtaaagt gatcatcatc gtcagcattt tcctgagcgc tttcaacagc
     2161 ttctcgctga gcgggaaaat cgtcgataac atcaacgact cggcgctggc gtccgtcagc
     2221 cgggtgatca ccccggtctt caagccaatt ggcgtgcatg aagataactg gcaggcaacg
     2281 gttggcctgt ttacaggtgc catggcgaaa gaagtggtag tgggtacgct caacaccctc
     2341 tacaccgcag aaaatattca ggacgaagag ttcaatccgg cagagtttaa cctcggtgaa
     2401 gagctgttca gtgcgataga tgaaacctgg cagagcctga aagacacctt cagccttagc
     2461 gtactgatga accccattga agccagcaaa ggcaacggcg aaatgggtac cggggcgatg
     2521 ggcgtgatgg atcagaaatt cggtagcgca gcagcagctt acagctacct gattttcgtc
     2581 ctgctgtatg taccatgtat ctcggtgatg ggagccatcg cccgtgaatc aagccgtggc
     2641 tggatgggct tctccatcct gtgggggctg aatatcgctt actcgctggc aacattgttc
     2701 tatcaggtcg ccagctacag tcagcaccca acttacagcc tggtgtgcat tctggcggtt
     2761 atcctgttta acatcgtggt tatcggtctg ctgcgccgcg cgcgtagccg ggtggatatc
     2821 gaactgctgg caacccgcaa gtcggtaagc agttgctgcg cagccagcac caccggtgat
     2881 tgccattaat ggcttcactt attcaggtgc gcgatttgct ggcgttacgg ggccgtatgg
     2941 aagcggccca gataagccag acattgaaca ctccacagcc aatgattaac gccatgctgc
     3001 aacaactgga aagtatgggc aaagccgtgc ggattcagga agaacctgac ggctgcctct
     3061 ctggcagttg taaaagctgc ccggaaggaa aagcctgtct gcgcgagtgg tgggcgcttc
     3121 gttaacctta ctccatcgcc tgttttggaa agcccggtat gcgtctgcat ccgggctttt
     3181 ttgcgtgcgg ctttccataa aaatgcaact cttgcagcac ggcgtaagtt cctttgaaag
     3241 catctcgcag ggatgaaaac tcgctaatac acaggtgtgg agtggcgcgt agagtcgcgg
     3301 cattcaaaca acaggtgaag gaacgccatg agcaaaaagc agagttccac cccacacgat
     3361 gcgctgttca aactcttttt acgccaaccg gacacggctc gtgattttct tgcgtttcat
     3421 ttaccggcac ccattcacgc gctttgtgat atgaaaaccc tcaagctgga gtcgagcagc
     3481 tttattgatg acgatctgcg tgaaagctat tccgatgtgc tgtggtcggt gaaaacggaa
     3541 caaggaccag gatacatcta ttgtctgatt gaacatcaaa gcacctcaaa caaactgatc
     3601 gcatttcgca tgatgcgtta cgctattgcc gcaatgcaaa atcaccttga tgctggatac
     3661 aaaacgttgc cgatggtggt gccattgttg ttttaccacg gtattgaaag cccctatccc
     3721 tattcgctgt gttggctgga ttgtttcgcc gatcccaaac tggcaaggca gctttatgcc
     3781 tccgcatttc cgctgattga tgtcaccgtc atgcctgatg atgaaatcat gcagcaccga
     3841 cgtatggcgc tgctggagtt aattcaaaaa catattcgtc aacgcgacct gatggggcta
     3901 gtagagcaaa tgggctgctt attaagtagt ggatacgcta atgacagaca aatcaaaggg
     3961 ctgtttaatt acatactgca aaccggcgac gcggtacgtt ttaacgattt tatcgacggc
     4021 gttgccgaac gttcaccgaa acacaaggag agtttaatga caattgcgga aagattgcgg
     4081 caggaggggg aacaatccaa agccctgcat atagccaaaa taatgcttga atccggagtc
     4141 cctcttacag acatcatgcg ctttaccggg gtgtcagaag aagagttggc tgcggcgagc
     4201 cagtaaattt ctgtctcgcc atttcaaaag ttgcctacac cctctgcttc aacgccacca
     4261 gcaggtgaca aaactcgacc ggatgcgaaa taaacggcgc atgggccgct ttggcgaaga
     4321 tatatgattt gctgcgaggc cagagtttat ccagcatcgg caccactttg cgcggcacca
     4381 gaccatcgag atagccatac aatcgcaaaa acggcatggg cacgttttgc agcggctgac
     4441 ggagatcaac cgttttcagg atttccagcc cgccattaag cacgtcaacc tccggcatcg
     4501 gtaacgccag aacggttttc ttcaacgccc gcgcatcctg gcgcgccgtt tcagtcccca
     4561 tggtttgtaa cgccaggaac cgctccactg tacgctgaaa atcatcactg agttgctgct
     4621 gaaatcccgc cagcacgtcc ggttttatcc ccggccaatc gtcacgagca ctaaaacaag
     4681 gtgacgacgc cacggtgacc agcgcctgaa cacgctcggg atgggttaac gcaatctggc
     4741 ttgccaccag cccgcccaga ctccagccta accaaatggc tttatcaggt gcctgttgca
     4801 gcacggcttc ggccatatca gcaagtgaca gcgcaccaaa tccctggctg cgcccgaagc
     4861 cgggcagatc aacaaggtgc agcgtaaaat gcgagctaag ttcctcgtca atgcaacgcc
     4921 acacttcggc attcagtccc catccgtgca gcagcacaag atgaacattc ccctgacctt
     4981 tggtctgcca ccagatgtta ttcatccgct attgttctct tttgacttac aaggatgaac
     5041 atatgctaac agtaccggga ttatgctggc tatgccgaat gccgctggcg ttaggtcatt
     5101 gggggatttg ttcggtctgc tcacgcgccg cccgtacaga taaaacgtta tgcccacaat
     5161 gtggattacc cgccacacac tcacatcttc cctgcggtcg ctgcctgcaa aaaccaccgc
     5221 cctggcaaag actggtcacg gttgccgact atgcgccgcc gttaagtccg cttatccacc
     5281 agcttaaatt ttcccggcgc agtgaaatcg ccagcgccct gtcacgtctg ttactattgg
     5341 aagtcttaca cgctcgtcgc accaccgggt tgcaattgcc ggatcgcatc atcagcgttc
     5401 cgttatggca gcggcgtcac tggcgtcggg gatttaatca gagcgatttg ctgtgtcagc
     5461 cgttatcacg ctggttgcac tgccgatggg atagcgaagc cgtcacacga acacgggcca
     5521 ctgcgaccca gcattttctc agtgcccggc tacgcaagcg caacctgaaa aatgcctttc
     5581 gtcttgaatt gcccgtgcaa ggtcgccata tggtgattgt ggatgatgtc gttaccaccg
     5641 gaagtaccgt cgcagagatt gcgcagttgc ttttacgcaa tggtgcggcg actgtccagg
     5701 tctggtgcct ttgtcgaacc ttgtagagcc tcgatgatag gcgtattata accaactaaa
     5761 atagtcaact attaggccat tactatgatc cgtatttccg atgctgcaca agcgcacttt
     5821 gccaaactgc tggcaaacca ggaagaaggg acacaaatcc gcgtatttgt gattaaccct
     5881 ggcacgccta acgctgaatg tggtgtttct tattgtccgc cggatgccgt ggaagccacc
     5941 gacactgccc tgaaatttga cctgctgacc gcgtatgttg atgagttaag cgctccttac
     6001 ctggaagatg cagagatcga ttttgttacc gaccagttgg gttctcagct aacactgaaa
     6061 gcgcctaacg ccaaaatgcg taaagtggca gacgatgcac cactgatgga gcgcgtggag
     6121 tatatgctgc agtcgcagat caacccacag cttgctggtc acggtggccg cgtttcactg
     6181 atggaaatca ccgaagacgg ttacgccatt ctgcaatttg gcggcggctg taacggttgt
     6241 tccatggtcg atgtgacgct gaaagaaggg atcgagaagc agctgctaaa cgaattcccg
     6301 gagctgaaag gtgtgcgcga tctcaccgaa caccagcgcg gcgaacactc ctactactaa
     6361 gttatcccct cttttgtaga ttgcccgatg cgacgctaaa gcgtcatttc gggcctacgt
     6421 tgaacatgtg ccagacgtgg gcgcagcatt gctttggcaa atccctccct tcgtttctcc
     6481 gcgataatat gaccaacctc tcataattta aatttactcc gctctggtga ttctcaaacg
     6541 ccagatgtta ccggtatcat tcacatgggt accaaacata ctcctgacat ctgactacaa
     6601 taattagttt tagtgggtat cagtcgtggt gccgcaatat ctctgttccc gattgggata
     6661 attagagttt gtcgtcagaa aattgacgtt acccgtaaca aatgaaaggc caggtaaatc
     6721 atgccattag tcattgttgc tatcggtgta atcttgttgt tgctcctgat gatccgtttc
     6781 aaaatgaacg gcttcatcgc tctcgtcctc gtggcgcttg ctgttggatt aatgcaaggg
     6841 atgccgctgg ataaagttat tggctccatc aaagccggtg tcggcgggac gctcggtagc
     6901 cttgccctga tcatgggttt tggcgcgatg ctgggcaaaa tgctggcaga ctgcggtggc
     6961 gcacaacgta tcgccaccac cctgattgcc aaatttggta aaaaacacat ccagtgggcg
     7021 gtggtactga ccggttttac cgttggtttt gccctgttct atgaagtggg ctttgtgctg
     7081 atgctgccgc tggtgtttac catcgcggct tctgcgaata ttccactgct gtatgttggt
     7141 gtaccaatgg cagctgcact gtctgtgacc cacggcttcc tgccaccgca tccgggtccg
     7201 actgcgattg ccaccatttt caatgccgac atgggtaaaa ccctgctgta cggtactatt
     7261 ctggcaatcc cgaccgtgat tctcgccggt ccggtttacg ctcgcgtgtt gaaaggtatc
     7321 gataagccga tccctgaagg tctgtacagc gcgaaaacct tcagcgaaga agagatgccg
     7381 agctttggcg tcagcgtctg gacctctctg gtgccggtag tgctgatggc gatgcgtgcg
     7441 attgccgaaa tgatcctgcc gaaaggtcac gctttcctgc cggtagcgga gttcctcggt
     7501 gacccggtaa tggctacgct gattgccgtg ctgattgcga tgttcacctt tggtctgaac
     7561 cgtggtcgtt caatggatca gattaacgac acgctggttt cttccatcaa aatcattgcg
     7621 atgatgctgt tgatcatcgg tggtggcggt gcgttcaagc aggtgctggt agacagcggc
     7681 gtggacaaat acattgcttc catgatgcac gaaaccaaca tttctccgct gctgatggcc
     7741 tggtcgattg ctgccgtact gcgtatcgcg ctgggttccg caaccgttgc ggcaatcact
     7801 gcgggtggta tcgcggcacc gctgattgca acgacgggtg ttagcccgga gctgatggtt
     7861 attgcggtgg gttccggtag tgtgattttc tctcatgtga acgatccggg cttctggctg
     7921 ttcaaagagt actttaacct gactatcggc gagaccatca aatcctggtc gatgctggaa
     7981 accattatct cggtgtgcgg tctggtaggc tgtctgctgc tgaatatggt gatttgataa
     8041 cactgactgc cggatgcatc gcatccggca tcaaccgcac tctactgctt cttcgctgca
     8101 gctctgcgcc gtctgtccaa atccttcagc aacttattca cgccatcatc ggcaaacatc
     8161 gtctcaagcg ttgcggaaag cttgcgtcgc cagtttttat actggtaact ggtgccagga
     8221 atattcaccg gttcggccat atccagccag tcttccggct gtagtcctaa cagagcactg
     8281 ttactgtcgg caatgtagcg ctgcaaacca cgattaagcg tcggcgtcat cgacatcaac
     8341 gatgccttat gcccggcacg ttttggcaga caaccatatt tatgcagtgc atccagcagc
     8401 ccttgcttcg ccagttcgcg atcctgatac agaccgcgca gtaccacttc atccggatac
     8461 agccccaggg ttttgcccaa cgttagatcc ccgctctccc agtaaccgcg cagcgtaggc
     8521 aggtcatgtg tcgccgcaac cgccatcgac tgctccggat acgctttcgg tgcacggaac
     8581 gtcttctcgt ggtcgttttc gaaatagagc actttgtagg agtacacacc gctgctgcgc
     8641 agcttaccga caatctctac cggtacggta ccgagatctt caccaatcac catacagcga
     8701 tgacgtttac tttcgagtgc cagaatcgag agcagatcat ccaccggata gtgaacatac
     8761 gcgccctgat ctgccgtctc gccatacggt atccaccaca aacgcagcat cgacatcaca
     8821 tggtcaattc gtaatgcgcc gcagttttgc atattggcac gcaacagctc gataaacggt
     8881 tcataggcac gcgcggtgat gatatgcggg tccattggcg gtaatcccca gttctgcccc
     8941 aacgggccga ggatatccgg cggcgcgcca accgacgctt tcaggcaata tagttcacgg
     9001 tcacaccagg tttccgcccc accttccgct acgccaaccg ccagatcacg atacaagcca
     9061 atcggcattt catagccctg gcttatctcc cagcaggcgg caaactggct gtaagccagc
     9121 cactgcaacc agagataaaa atcgacgtca tcacgatgtt cttcgcagaa ctgacgcact
     9181 tctggtgaat ccacgttctg atacatctct ggccatgcag gccagcccca gcgcatttcg
     9241 tcctctttca cttgctgggc atgtagcgca tcaaaggctg cctgccagaa caggctgtcg
     9301 ccctgctctg caacaaactg gcgaaacgcg gtcatctgct catcatcacg ttgcgcgaaa
     9361 cctttccacg ccattcgtaa tgctgtcatt tttagggcgg taaccgtgga gtaatcgacc
     9421 cagtcggcat cgcgcgcctg ttgcagcgtc tgttgcgtgg tcggcaactg ccaccaggcc
     9481 tgagcctctt cgctaagatg gaaatcttca acggcgttaa cgtcgatata aatcacattc
     9541 agccaacggc gagaagacgg actgtatggg ctggcactct ccggatttgc cggatagagc
     9601 gcatgaatcg ggttcaggcc gatgaacgac ccgccacgtt ttgccacatc caccagcatc
     9661 gctttgagat cgccaaaatc cccaataccc cagttttttt ccgatcgcag cgtataaagc
     9721 tgaacgcagg caccccacag cttttgttta ttcagcaacg cctgcggttc gtaacagcgt
     9781 ttcggggcga caatcacccg gcaatgcgcg cgctggtcgt cctgggtgag tgtcagcgtg
     9841 tgataacctt ccggcagctt cgtcggtaga ttgaacgctt tgccccccgt tacatggcct
     9901 ttgtactgtg ttccttcttc ggtggtcagc agccagctat attcgccgct gccctccacc
     9961 accatcggca tttttttgcc gctggtataa accatgacat tcgggactgg cgttaccgcc
    10021 actttcgtgg cggtacgttg atgcatcgcg tcaagcaaac gccgtttggt ttcggcgcta
    10081 atcgactgcg gtttaccgtg ggcattgatg taattggggc taatccccgc cgccagcgcg
    10141 gcattatcca gacgtttgct ttccatcgag cttccttagc gttttgcctg ccagatacga
    10201 gcctgataat cgcgaataga gcgatccgag ctaaacatac cgcagcgggc ggtattgagg
    10261 atcgccgcgc gagtccaggc ctcctggtcg cggtacagca catccacctg cttttgtgcc
    10321 tcaacatagg ctgcgaaatc cgccatcacc agatacggat cgccgccttg tttgccgata
    10381 ctgtgcagca tctggtcgaa ggcatgctta tcgccgtcgc tgtatttacc gctttccagc
    10441 tctttcaata ctgcgtccag caccttatct ttcttccgcc atttcaccgg gtcgtagcct
    10501 ttggccagaa ttgccttcac ttgttccacg gtatgaccaa aaataaagat attttcttca
    10561 ccgactttct cggagatttc aacgttcgca ccatccagcg taccgacagt aagcgcacca
    10621 ttgagcgcca gtttcatatt gccggtaccg gaagcttctt tacctgcagt cgaaatttgt
    10681 tcggagatat ccgccgccgg gatcagtttt tccgccgccg aaacgcaata atcctgcagg
    10741 aacaccacct tcaacttatc gccaaccagt ggatcgttgt tgatcacgtc agccactttg
    10801 ttgatcgcaa agataatatt cttcgccagg tagtagcccg gtgccgcttt cgcgccgaag
    10861 aggaagacgc gcggtacgcg atcagcctgc gggttttcac gaatttcttt gtacaacgcc
    10921 agaatatgca gcagattcag gtgctggcgt ttgtactcat gcagacgttt aatctgaata
    10981 tcgaaaatcg cctgtggatt gatctcaata ccggtacgaa ctttcacaaa ctccgccaga
    11041 cggactttat tcgcctgctt gatctcgcga tattgctgac ggaatttcgc atcatcagcg
    11101 aatttttcca gattgatcag ctgatcgaga tcgttagccc actctttttg cagtaattta
    11161 tccaacagag ccgccagtgc agggttgcac tgtttgatcc agcgacgtgg ggtaataccg
    11221 ttggtgacgt tatggaattt gttcggccat agctggtgat attccgggaa cagatctttc
    11281 accaccagat ccgagtgcag cgccgcaaca ccgttcaccg cgaaaccgcc aaccacacac
    11341 aggttcgcca tatgcacttg tttatcgtgc accaccgcca gtttggccca cactttttca
    11401 tcgcccggcc aggttttctc caccagcgtt ttaaagcgag tattaatttc gttaataatc
    11461 tgcatatggc gcggcagtaa gcctttcacc agtttcacat cccagcgttc cagcgcttct
    11521 ggcatcaggg tatggttggt gtaagcgaaa gttttgctgg taatggccca ggcgtcatcc
    11581 cagctcatct ggtgctcatc gatcagcacg cgcagcagtt ctggaatcgc gatagttggg
    11641 tgggtatcgt tcagctgaat aacttcataa tccgccagtt cgtgcagttt acgccccgcc
    11701 agatgatggc gacgcaaaat atccgctacc gaacaggcac actggaagta ctgctgcatc
    11761 aagcgcagct ttttaccggc agtatggttg tcgtttggat agagaacttt ggtcagtttt
    11821 tccgcattga tgccctgctg ttcggcacgc aggaaatcac cgtcgttaaa tttagtcaga
    11881 tcaaacggat gcgcgtgcgt cgcctgccac agacgcagcg gctgcgccac gccattacga
    11941 tagccgacaa cggggagatc ccacgcttga ccggtaatgg taaactccgg ctcccagcgt
    12001 ccgtctttcg tcactttacc gccaatccct acctgcacat ccagtgcttc gttgtggcgg
    12061 aaccacgggt agttactacg atgccagtca tccggcgctt caacctgttt gccatcgaca
    12121 aaagactggc ggaacaaacc atattgatag ttcagaccgt aacccgtcgc agactgaccg
    12181 atagttgcca ttgagtcgag gaagcacgcc gccagacgtc ccagaccacc gttacccagc
    12241 gccgggtcga tctcttcttc cagcaggtcc gtcagattga tgtcataagc cttcaacgaa
    12301 tcctgtactt cctgatacca gccgagattc aacaggttgt tgcccgtcag gcgaccaatc
    12361 aaaaactcca ttgagatgta gttaacatgt cgctgattcg ccaccggctt ggcgaatggc
    12421 tgagcacgca gcatttcggc cagtgcttca ctcactgcta gccaccactg gcgaggagtc
    12481 atttcagccg cagaatttaa gccataacgc tgccactgac gtgaaagcgc ttcctgaaat
    12541 tgcttatcgt taaaaatagg ttgtgacata ggagttccac ttttcttaga ttttcaacac
    12601 aacgttatcg ctagtttgcc aggctcgatg ttgaccttcc tcatcctgcg ggggattagg
    12661 cagggaggag ttgcggggat gagcaaggaa atgtgatctc aaccacttaa agctagtgca
    12721 aaccacagga ttagcagcaa atcaatgcaa tacagcgcag aaaatctgta tctaagtgca
    12781 aaaaatggcc gttgcgtatt ttcaaaaagc ggaaggtaac tctataaatt aagtaaagga
    12841 gtgaaacagt ttcacaagta aaatatccag tgtgctccat ctcattctta atagatttat
    12901 taagatcatc tttttagatg gcactttcat caggaatgaa gaagaaaccc ttgcttaaat
    12961 gaatctgatg aacataaggg aaaccagtat tcacgctgga tcagcgtcgt tttaggtgag
    13021 ttgttaataa agatttggaa ttgtgacaca gtgcaaattc agacacataa aaaaacgtca
    13081 tcgcttgcat tagaaaggtt tctggccgac cttataacca ttaattacga agcgcaaaaa
    13141 aaataatatt tcctcatttt ccacagtgaa gtgattaact atgctgattc cgtcaaaact
    13201 aagtcgtccg gttcgactcg accataccgt ggttcgtgag cgcctgctgg ctaaactttc
    13261 cggcgcgaac aacttccggc tggcgctgat cacgagtcct gcgggctacg gaaagaccac
    13321 cctcatttcc cagtgggcgg caggcaaaaa cgatatcggc tggtactcgc tggatgaagg
    13381 tgataaccag caagagcgtt tcgccagcta tctcattgcc accgtgcagc aggcaaccaa
    13441 cggtcactgt gcgatatgtg agacgatggc gcaaaaacgg caatatgcca gcctgacgtc
    13501 actcttcgcc cagcttttca ttgagctggc ggaatggcat agcccacttt atctggtcat
    13561 cgatgactat catctgatca ctaatccagt gatccacgag tcaatgcgct tctttattcg
    13621 ccatcaacca gaaaatctca ccctggtggt gttgtcacgc aaccttccgc aactgggcat
    13681 tgccaatctg cgtgttcgtg accaactgct ggaaattggc agtcagcaac tggcatttac
    13741 ccatcaggaa gcgaagcagt tttttgattg ccgtctgtca tcgccgattg aagccgcaga
    13801 aagcagtcgg atttgcgatg acgtttccgg ttgggcgacg gcactacagc taatcgccct
    13861 ctccgcccgg cagaataccc actcagccca taagtcggca cgccgcctgg cgggaatcaa
    13921 tgccagccat ctttcggatt atctggtcga tgaggttttg gataacgtcg atctcgcaac
    13981 gcgccatttt ctgttgaaaa gcgccatttt gcgctcaatg aacgatgcgc tcatcacccg
    14041 tgtgaccggc gaagaaaacg ggcaaatgcg tctcgaagag attgagcgtc aggggctgtt
    14101 tttacagcgg atggatgata ccggcgagtg gttctgctat cacccgctgt ttggcaactt
    14161 cctgcgccag cgctgccagt gggaactggc agcggagctg ccggaaatcc accgtgccgc
    14221 cgcagaaagc tggatggccc agggatttcc cagcgaagcg attcatcatg cgctggcggc
    14281 aggcgatgcg ctgatgctgc gcgatattct gcttaatcac gcctggagtt tgttcaacca
    14341 tagcgaactg tcgctgctgg aagagtcgct taaggccctg ccgtgggaca gtttgctgga
    14401 aaatccgcag ttagtgttat tgcaggcgtg gctaatgcaa agccaacatc gctatggcga
    14461 agttaacacc ctgctagccc gtgctgaaca tgaaatcaag gacatcagag aaggcaccat
    14521 gcacgcagaa tttaacgctc tgcgcgccca ggtggcgatt aacgatggta atccggatga
    14581 agcggaacgg ctggcaaaac tggcactgga agagctgcca ccgggctggt tctatagccg
    14641 cattgtggca acctcggtgc tgggtgaagt gctgcactgc aaaggcgaat tgacccgctc
    14701 actggcgcta atgcagcaaa ccgaacagat ggcacgccag cacgacgtct ggcactacgc
    14761 cttatggagt ttaatccagc aaagtgaaat tctgtttgcc caagggttcc tgcaaaccgc
    14821 gtgggaaaca caggaaaaag cgttccagct gatcaacgag cagcatctgg aacagctgcc
    14881 gatgcatgag tttctggtgc gcatccgagc acaactgtta tgggcctggg cacggctgga
    14941 tgaagccgaa gcgtcggcgc gtagcgggat tgaagtcttg tcgtcttatc agccacagca
    15001 acagcttcag tgcctggcaa tgttgattca atgctcgctg gcccgtggtg atttagataa
    15061 cgcccgtagc cagctgaacc gtctggaaaa cctgctgggg aatggcaaat atcacagcga
    15121 ctggatctct aacgccaaca aagtccgggt gatttactgg caaatgaccg gcgataaagc
    15181 cgccgctgcc aactggttgc gtcatacggc taaaccggag tttgcgaaca accacttcct
    15241 gcaaggtcaa tggcgcaaca ttgcccgcgc acaaatcttg ctgggcgagt ttgaacctgc
    15301 ggaaattgtt ctcgaagaac tcaatgaaaa tgcccgcagt ctgcggttga tgagcgatct
    15361 caaccgtaac ctgttgctgc ttaatcaact gtactggcag gccggacgta aaagtgacgc
    15421 ccagcgcgtg ttgctggacg cattaaaact ggcgaatcgc accggattta tcagtcattt
    15481 tgtcatcgaa ggcgaagcga tggcgcaaca actgcgccag ctgattcaac tcaatacgct
    15541 gccggaactg gaacagcatc gcgcgcagcg tattctgcga gaaatcaatc aacatcatcg
    15601 gcataaattc gcccatttcg atgagaattt cgttgaacgt ctgctaaatc atccggaagt
    15661 gccagaactg atccgcacca gcccgttgac ccaacgtgaa tggcaggtcc tggggctgat
    15721 ctactccggt tacagcaatg agcaaattgc gggcgagctg gaagtggcgg caaccaccat
    15781 caagacgcat atccgcaatc tgtaccaaaa actcggcgtc gcccaccgtc aggccgcggt
    15841 acaacacgcg cagaaactgc tgaagatgat gggatatggg gtgtgagttt agccggataa
    15901 tgcattggat ccggtttaca tctttacatc attcaatact cacccgcgtt acgccatctg
    15961 tttctatcaa accaaaccgc accggcaaga aacgctccac cacggcgata ttggtcagca
    16021 gatggcatga aggatgggcg accgtaaatt ctcccgcgcc cgccagcgcc atcggtagca
    16081 ccagctggtc ggcgagatat tcccccactg ccgccgggct tgccaggtag cgtttcacct
    16141 ctttcactaa ctgcgcggct accacctcgg cactgacgcg cttttcaccg acgacgaaaa
    16201 agcgttcagt gatattttca ctttcgactt ccagcgagac ggtattaccc ggcccctgat
    16261 cgcgcggcag gttatgaata ttctgttcat gcagggaaaa actccccgcc agtgtagcga
    16321 tttcacgctc agcaacatgg cgcggcacac cagctaatag aacttctcca cgcatctgca
    16381 caatgttccc gcgctcgcca agttgcaagg tgttaaacga tgccacgggc gagacttccg
    16441 ttgccaccac gccgcctccg gcaggataaa aaccgtgacg taacagcgtg gtttgctgat
    16501 gaattcctat tttcgccagc agcggctcca gcacccggcg gataaaatcc gcaggcggcg
    16561 ccgacgggtt atcggtgcct ccgctcactt caacacgcga aggtccatcg gcaaaccaca
    16621 gcgcgggcag caccgtttgc agcaccagcg tacagcttcc ggcactaccg atagcaaagc
    16681 ggtactcgcc gccgcgcacg gcgccaggcc ggaagaccag acgctgcgac cccagctccg
    16741 cgccttccac cgttgcccta caaatttccg cagccgcttt taccgcggtc agatgctggc
    16801 gcaacagccc cggtttcgcc cgcccggcac gaatgctggt gatggtaaat ggctggccgg
    16861 ttatcatcga caggctcagc gccgagcgca gaatctgccc gccaccttcg ccctgtgcgc
    16921 catccagcgc aatcatcctt ttcatcattt atccttttac gcacaccacc tgacgcaggg
    16981 tatagataac ttccaccaga tcgctttgtg ccgtcatcac cgcatcaata tctttatacg
    17041 ccatcgggat ttcgtcgatc acttcggcat ctttacggca ttccacatgc gcggtggcac
    17101 gaatttgatc ttccacgctg aacagttttt tcgctttagt tcggctcatt acccgcccgg
    17161 caccgtggct gcacgaacag aacgactctt catttcccag cccacggacg ataaagcttt
    17221 ttgctcccat cgaaccggga ataattccat attgaccagc acgcgcagac accgcgcctt
    17281 tacgcgtcac gtagatctct tcaccaaagt gctgttcttt ttgcacatag ttgtggtgac
    17341 agttgatctc ttccatcgcc agcgtttgtg gctgtctgac cgttttctgc gtaatgctct
    17401 gcaatgccgt taccacgttt tccatcatca catcgcggtt aaggctggca aaaagctgcg
    17461 cccaggccac ggctttcagg taatcatcaa agtattccgt accttccata aagtacgcca
    17521 gatcacgcga cggcaacgtc tcaagcgttt cctgcatctc tttttgtgcc agatcgataa
    17581 agtaagtccc gatggcgtta ccaattccgc gtgaaccgga gtgcagcata atccacacct
    17641 ggtccgactc atcaaggcag attttaataa agtggttacc ggttcccagc gttcccaggt
    17701 gtttatagtt attggtattc aggaaacggg gatatttttg cgttaaccac tgataaccgg
    17761 cttcaagctc agcccatttc gcatcgacgt tgacaggcgg gttttcccat gcgcctttat
    17821 cacgtttaca acgcccggta gtacgcccgt gcggcacggc cgtttcaatc gcctgacgca
    17881 gctctgccag gttttcaggc aggtcttccg ccgttaacgc ggtacgcagc gcgttcattc
    17941 cacagccaat atccacgccc accgccgccg gaataatcgc ccctttggtc gggatcacgc
    18001 taccaatggt ggaatcttta cccaggtgta catcaggcat taccgcaata tgtttgaaaa
    18061 taaacggcat cttcgccgta ttaataagtt gctgacgcgc atcggcttct accggcacgc
    18121 ctttggtcca catttttacc ggggcatttt cagtggtcag taattcgtaa ttcattttgt
    18181 ttttctcttt tcgttgtttg ctgtcctgat aattgcaacc gtcgtgccag aaaattaaat
    18241 aagtaaatta attttttaat tcattgtttt taaaaagatt atatctttat gtccgtaacc
    18301 ggagatttcc cgcaaagccg atttaccgat aatgaaatat cgtcttttat aaggatatct
    18361 aagatgcgta aaacagtagc ttttggcttt gtcggaacgg tgctggatta tgccgggcgc
    18421 ggcagtcagc gctggtcaaa atggcatccg acactctgtt tatgccagca agaatcgttg
    18481 gtcatcgatc gactggaatt attgcatgac gcccgctcgt gctcgctatt tgaaacgctt
    18541 aaacgcgata tcgccagcgt ttcgccagaa acagaagtgg tgagcattga gattgaactg
    18601 cataacccgt gggatttcga agaggtttac gcctgcctgc atgatttcgc ccgtggttac
    18661 aagtttcagc cagaaaaaga agactattta attcacatca ccaccggcac ccacgtcgcg
    18721 cagatttgct ggtttctgct ggcggaagcg cgttatctac ccgcccggtt gatacaaact
    18781 tcaccaccgc gcaaaaaaga acaaccgcgc ggtgccggtg aagtgacgat tatcgatctc
    18841 gatctaagcc gttataacgc catcgccagc cgctttgccg aggaacgcca gcaaacgctt
    18901 gattttctta agtccggcat tgccacgcgt aacccccact tcaaccgcat gattgagcag
    18961 attgaaaaag tggcgattaa atcccgcgca ccgatcctgc ttaacggccc aaccggtgcg
    19021 ggaaagtcat ttctggcgcg acgtatattt gaattaaaac aggcgcggca tcagtttagc
    19081 ggcgcgtttg tggaagtgaa ctgcgccacc ctgcgcggcg ataccgccat gtcgacgctg
    19141 tttggtcatg tgaaaggcgc gtttaccggg gcgcgggaat ctcgtgaagg tttattacgc
    19201 agcgccaacg gcggaatgtt gttttttgat gagattggcg aactgggcgc agacgaacag
    19261 gcaatgctgc taaaagccat tgaagagaaa accttttacc cgtttggcag cgatcgccag
    19321 gtgagcagtg attttcagct tatcgccgga acggtgcgcg atttgcgcca gctggttgcc
    19381 gaaggcaaat ttcgcgaaga tctgtacgcg cggatcaatc tctggacctt caccctgccg
    19441 ggtctacgcc agcgccagga agatattgaa ccgaaccttg attatgaagt ggagcgccac
    19501 gccacactca ctggcgacag cgtgcgtttt aacaccgaag cgcggcgcgc ctggttggct
    19561 tttgcgacct ctccccaggc aacatggcgc ggtaactttc gcgaactttc tgccagcgtc
    19621 acgcggatgg ccacctttgc cactagcgga cgcatcactc tggacgtggt tgaagatgag
    19681 ataaaccgtc tgcgctataa ctggcaggag agccgcccct ccgcgcttac ggcgttgctg
    19741 ggcgcagagg cagaaaacat cgatctcttc gaccgtatgc aactggaaca cgttatcgct
    19801 atctgccgcc aggcaaagtc gctttctgca gccggacgac agctttttga tgtttcgcgc
    19861 cagggaaaag ccagcgtcaa tgacgcggat cggctacgca aatacctggc gcgttttggt
    19921 ctgacgtggg aagccgtgca ggatcagcac agctccagtt gaatatgatg gtccgtcagc
    19981 acctgcatta cgcttactgg cggcggggcg tcggtgtaga cggcatctac catgctgatg
    20041 ctgcccatat tgaccatcgc gttacggcca aatttcgagt gatcgacaac cagcataacg
    20101 tggcgcgagt tctcaataat ggcgcgcttg gtgcgaactt cgtggtaatc gaactccagc
    20161 agcgagccgt cgctatcgat gccgcttatc cccagaatgc cgaaatcaag gcggaactgg
    20221 gagataaaat cgagcgtcgc ttcgccaatg atcccgccat cgcggctgcg taattcgcca
    20281 ccagcgagaa taatgcggaa atcttctttt accatcaacg tgttagcaac attgagattg
    20341 ttggtgacaa tacgcaaatt gctgtgatta agcagcgcgt gcgccaccgc ttccggcgtg
    20401 gtgccgatat cgataaacag tgtcgagccg ttggggattt gctccgccac tttgcgggca
    20461 atcctctctt tttcttcggt ctgggtggct ttgcgatcgt gccacggcgt gttaaccgaa
    20521 ctggaaggca gcgccgcacc gccatggtga cgcaggatca ggttttgctc cgccagctca
    20581 ttgaggtcgc ggcgaatagt ctgcgggctg acggagaaat gctctaccag ctcttcagta
    20641 ctgacataac cctgctgttt aaccagttcg ataataccgt tgtgacgttg tgtttgtttc
    20701 atttataaat ccctggaatt attttcgttt tcgcgcattg agcgaatcaa caaaagccat
    20761 cgctaaaccc acggctaacc cggcgatgtg tgctccgttc gccatcgaca tcccaaacaa
    20821 atcaaaccat ccggcgataa tccagatcag cgcaaagata attaacccac gttgcaggta
    20881 aatgccactt tgcggatcgc gctcaccacg tagccagacg tagcccatca gcgcatacac
    20941 cacgccagaa agcccgccaa accacggccc gctgaatttt tgctgcacat agccgcttaa
    21001 cagggcacta atgagagtaa taacaattag cttaccgcta ccgaggcgtt tttccaccgc
    21061 accgccgaga taccaccacc agagcaggtt aaagaggata tgcatcagcg agaagtgcat
    21121 taacgcgtgg gtgaagtaac gccagaactc aaatttcagt gttggatcga atggccaggc
    21181 cagccataac atcacttcct gatcgccgag aatttgcatg gcgataaaca ccaccacgca
    21241 ggcgatcatc accacccagg ttaccggacc tgcgcgttca cgcaaggcag caaagaaagg
    21301 ataacggcga taatgcagac cactgccggt atggcccgcc tgccagctgg ccgccagata
    21361 acgcggatct gccgggtttt cgagaaaacg cgccagctcc gcccgcacgc gctcggcctg
    21421 ggactcatcc gccagccaga catcgctttg gttatgttgt tgaatcgtaa ggataacacc
    21481 ctgcgtcgcc atgtaatcaa caaacgcctg cgccacgcgg gggttagcaa aagaggtaat
    21541 catcaacatc gttgctgtcg cttattccac acaaaagggg acagtataaa gcgttacgcg
    21601 ccgtacgcca cctctgcggg aaactgacgc tgccaggctt caaaaccgcc gtcaatgcta
    21661 tagaccacat cgtagccctg ttgcagcaga tactgcgccg cgcctttgct gctattgccg
    21721 tgataacaca tcaccatcac cggagtgtca aagtcgttat cacgcataaa cgcgcccagc
    21781 gtgtcgttgg ttaaatggaa agcctgcacc gcatgtccca ttgcgaaact ctgtggatcg
    21841 cgaatatcga ccagcaccgc ctctttttcc tgcaacttct ggtgcgcgtc ggcaacgtta
    21901 atacattcga acagatccat gcgtctctct ttctttacaa acaagtgggc aaatttaccg
    21961 cacagtttac gtcgaagcgg cagataaacg ccataatgtt atacatatca ctctaaaatg
    22021 ttttttcaat gttacctaaa gcgcgattct ttgctaatat gttcgataac gaacatttat
    22081 gagctttaac gaaagtgaat gagggcagca tggaaaccaa agatctgatt gtgataggtg
    22141 gcggcatcaa tggtgctggt atcgcggcag acgccgctgg acgcggttta tccgtgctga
    22201 tgctggaggc gcaggatctc gcttgcgcga cctcttccgc cagttcaaaa ctcattcacg
    22261 gtggcctgcg ctaccttgag cactatgaat tccgcctggt cagcgaggcg ctggctgaac
    22321 gtgaagtgct gctgaaaatg gctccgcata tcgccttccc aatgcgtttt cgcctgccac
    22381 atcgtccgca tctgcgcccg gcgtggatga ttcggattgg tctgtttatg tacgatcatc
    22441 tgggtaaacg caccagcctg ccgggatcaa ccggtttgcg ttttggcgca aactcagtgt
    22501 taaaaccgga aattaagcgc ggattcgaat attctgactg ttgggtagac gacgcccgtc
    22561 tggtactcgc caacgcccag atggtggtgc gtaaaggcgg cgaagtgctt actcggactc
    22621 gcgccacctc tgctcgccgc gaaaacggcc tgtggattgt ggaagcggaa gatatcgata
    22681 ccggcaaaaa atatagctgg caagcgcgcg gcctggttaa cgccaccggc ccgtgggtga
    22741 aacagttctt cgacgagggg atgcatctgc cttcgcctta tggcattcgc ctgatcaaag
    22801 gcagccatat tgtggtgccg cgtgtgcata cccagaagca ggcctacatt ctgcaaaacg
    22861 aagataaacg tattgtgttc gtgatcccgt ggatggacga attttccatc atcggcacca
    22921 ccgacgtaga gtataaaggc gatccgaaag cggtgaagat tgaagagagt gaaatcaact
    22981 atctgctgaa agtgtataac gcgcacttta aaaaacagct tagccgtgac gatatcgtct
    23041 ggacctactc cggtgtgcgt ccgctgtgtg atgatgagtc cgactcgccg caggctatta
    23101 cccgtgatta cacccttgat atccatgatg aaaacggcaa agcaccgctg ctgtcggtat
    23161 tcggcggtaa gctgaccacc taccgaaaac tggcagaaca tgcgctggaa aaactgacgc
    23221 cgtattatca gggtattggc ccggcgtgga cgaaagagag cgtgctgccg ggtggtgcca
    23281 ttgaaggcga ccgcgacgat tacgcagctc gtctgcgccg tcgctatcca ttcctgactg
    23341 aatcgctggc gcgtcattac gcacgcactt acggcagcaa cagcgagctg ctgctcggca
    23401 atgcgggggc gataagcgac ctcggggagg atttcggtca tgagttctac gaagcggaac
    23461 tgaaatacct ggtggatcac gaatgggtcc gccgcaccga cgatgccctt tggcgtcgca
    23521 caaaacaagg catgtggctg aatgcggatc aacaatctcg tgtgagtcag tggctggtgg
    23581 aatatacgca gcagaagttg tcgctggcgt cgtaaggatg atgcccggtt gaagtgcaac
    23641 cgggctattt ggattcctta gactattcat tgtaaataat tgaataacgg cccctgagct
    23701 aaaatcgcca aacttaagca cgttacccaa tcgccccact tcttcctctg gtttctattt
    23761 tttctgcacc aatggcaata atatcccaat gcaaaaccaa gctgtgcact aatcgggccg
    23821 acaaaatcag tccaaggctg cggccaaaaa ggggaaaaat tcaggggagg ccagacaaac
    23881 gtcagaaaga aatttcggat attttccagc aacgctgatt tctctggaga aatataaaga
    23941 atgaaattcg agagaattaa ccagaaatag accggcgaaa agaccagcca gcaatgcagt
    24001 ctgtttttta attcaggagg cgttctgcgg gagaattgcc aaccgatgcc agccattaca
    24061 c
//
LOCUS       DADMIB010000054        23492 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.054, whole genome shotgun sequence.
ACCESSION   DADMIB010000054 DADMIB010000000
VERSION     DADMIB010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23492
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.054"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(297..611)
                     /gene="pspE"
                     /locus_tag="JNZ89_001980"
     CDS             complement(297..611)
                     /gene="pspE"
                     /locus_tag="JNZ89_001980"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase PspE"
                     /protein_id="HAY8935876.1"
                     /translation="MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIP
                     LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKV
                     KG"
     gene            complement(686..907)
                     /gene="pspD"
                     /locus_tag="JNZ89_001981"
     CDS             complement(686..907)
                     /gene="pspD"
                     /locus_tag="JNZ89_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspD"
                     /protein_id="HAY8935877.1"
                     /translation="MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVA
                     RRPLKMLLAVALEPLLSRAANKLAQRYKR"
     gene            complement(916..1275)
                     /gene="pspC"
                     /locus_tag="JNZ89_001982"
     CDS             complement(916..1275)
                     /gene="pspC"
                     /locus_tag="JNZ89_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HAY8935878.1"
                     /translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS
                     IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME
                     RYVTSDTFTLRSRFRQL"
     gene            complement(1275..1499)
                     /gene="pspB"
                     /locus_tag="JNZ89_001983"
     CDS             complement(1275..1499)
                     /gene="pspB"
                     /locus_tag="JNZ89_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HAY8935879.1"
                     /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLA
                     QLADEAKRMRERIQALESILDAEHPNWRDR"
     gene            complement(1553..2221)
                     /gene="pspA"
                     /locus_tag="JNZ89_001984"
     CDS             complement(1553..2221)
                     /gene="pspA"
                     /locus_tag="JNZ89_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HAY8935880.1"
                     /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
                     STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK
                     SLEHEVTLVDDTLARMKKESGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK
                     LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK
                     QDNQ"
     gene            2388..3365
                     /gene="pspF"
                     /locus_tag="JNZ89_001985"
     CDS             2388..3365
                     /gene="pspF"
                     /locus_tag="JNZ89_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HAY8935881.1"
                     /translation="MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKEL
                     IASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
                     TLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPATVNEGT
                     FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLL
                     NYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLP
                     LDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI"
     gene            complement(3485..4750)
                     /gene="puuE"
                     /locus_tag="JNZ89_001986"
     CDS             complement(3485..4750)
                     /gene="puuE"
                     /locus_tag="JNZ89_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate transaminase"
                     /protein_id="HAY8935882.1"
                     /translation="MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYID
                     FAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA
                     KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP
                     FPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPK
                     ELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLS
                     GVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL
                     IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYG
                     NVIRFLYPLTIPDAQFDAAMKILQDALSD"
     gene            complement(4788..6020)
                     /locus_tag="JNZ89_001987"
     CDS             complement(4788..6020)
                     /locus_tag="JNZ89_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004984233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HAY8935883.1"
                     /translation="MPFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASR
                     IGFGASGRNGGQLVNSYNRDIDVIEKSYGMDTAPMLGSMMFEGGEIIRERIKRYQIDC
                     DYRPGSLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDH
                     SGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAG
                     NAYLGDKVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTA
                     DNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQF
                     GRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRV
                     PFTAMGAAYYSLRDRLGV"
     gene            complement(6059..7546)
                     /gene="puuC"
                     /locus_tag="JNZ89_001988"
     CDS             complement(6059..7546)
                     /gene="puuC"
                     /locus_tag="JNZ89_001988"
                     /EC_number="1.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase PuuC"
                     /protein_id="HAY8935884.1"
                     /translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT
                     QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA
                     LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
                     IAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLN
                     VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV
                     FSDCSDLQKAASSTAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP
                     LDPATTMGTLIDCAHADSVHSFIREGEGKGQLLLDGRNAGLAAAIGPTIFVDVDPNAS
                     LSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWMRDLSRAHRMSRRLKAGSVF
                     VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA"
     gene            complement(7821..8378)
                     /gene="puuR"
                     /locus_tag="JNZ89_001989"
     CDS             complement(7821..8378)
                     /gene="puuR"
                     /locus_tag="JNZ89_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001464354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator PuuR"
                     /protein_id="HAY8935885.1"
                     /translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK
                     VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN
                     PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT
                     GIPHSFSNTSAGICRIISAHTPTTF"
     gene            complement(8405..9168)
                     /gene="puuD"
                     /locus_tag="JNZ89_001990"
                     /pseudo
     CDS             complement(8405..9168)
                     /gene="puuD"
                     /locus_tag="JNZ89_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415814.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase"
     gene            9380..10798
                     /locus_tag="JNZ89_001991"
     CDS             9380..10798
                     /locus_tag="JNZ89_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HAY8935886.1"
                     /translation="METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLL
                     TDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVP
                     VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL
                     EFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIP
                     ADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYEEH
                     AGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRR
                     FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILH
                     GLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN
                     DELLQFERLITETEIEWMLKNA"
     gene            10947..11112
                     /locus_tag="JNZ89_001992"
                     /pseudo
     CDS             10947..11112
                     /locus_tag="JNZ89_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518772.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11102..12486
                     /gene="puuP"
                     /locus_tag="JNZ89_001993"
                     /pseudo
     CDS             11102..12486
                     /gene="puuP"
                     /locus_tag="JNZ89_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415812.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PuuP"
     gene            12620..12865
                     /locus_tag="JNZ89_001994"
     CDS             12620..12865
                     /locus_tag="JNZ89_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmjA family protein"
                     /protein_id="HAY8935887.1"
                     /translation="MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLM
                     NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE"
     gene            13178..14821
                     /gene="sapA"
                     /locus_tag="JNZ89_001995"
     CDS             13178..14821
                     /gene="sapA"
                     /locus_tag="JNZ89_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein SapA"
                     /protein_id="HAY8935888.1"
                     /translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQV
                     NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR
                     DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLKFADNVKSV
                     RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY
                     QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
                     QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG
                     TAETAASILPRASWAYDNEAKITEYNPAKSREQLKALGLENLTLKLWVPTRSQAWNPS
                     PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP
                     LLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA
                     SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP"
     gene            14818..15783
                     /gene="sapB"
                     /locus_tag="JNZ89_001996"
     CDS             14818..15783
                     /gene="sapB"
                     /locus_tag="JNZ89_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapB"
                     /protein_id="HAY8935889.1"
                     /translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW
                     VFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGIT
                     RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFA
                     LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA
                     ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI
                     RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR"
     gene            15770..16660
                     /gene="sapC"
                     /locus_tag="JNZ89_001997"
     CDS             15770..16660
                     /gene="sapC"
                     /locus_tag="JNZ89_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapC"
                     /protein_id="HAY8935890.1"
                     /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI
                     FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
                     FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH
                     AMLAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT
                     EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS
                     VLLVNLLGDGVRRAIIAGVE"
     gene            16660..17652
                     /gene="sapD"
                     /locus_tag="JNZ89_001998"
     CDS             16660..17652
                     /gene="sapD"
                     /locus_tag="JNZ89_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapD"
                     /protein_id="HAY8935891.1"
                     /translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS
                     GKSLIAKAICGVNKDNWRVTADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
                     DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
                     EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
                     LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN
                     TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE"
     gene            17654..18460
                     /gene="sapF"
                     /locus_tag="JNZ89_001999"
     CDS             17654..18460
                     /gene="sapF"
                     /locus_tag="JNZ89_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapF"
                     /protein_id="HAY8935892.1"
                     /translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA
                     IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN
                     PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG
                     LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
                     DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR"
     gene            18528..18881
                     /locus_tag="JNZ89_002000"
     CDS             18528..18881
                     /locus_tag="JNZ89_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HAY8935893.1"
                     /translation="MMDKIKSNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVG
                     SYILDFACCSARVVVELDGGQHDLAVAYDTRRTSWLESQGWTVLRFWNNEIDCNEEAV
                     LEIILQELNRRSPSP"
     gene            19249..20037
                     /gene="fabI"
                     /locus_tag="JNZ89_002001"
     CDS             19249..20037
                     /gene="fabI"
                     /locus_tag="JNZ89_002001"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HAY8935894.1"
                     /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
                     KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG
                     DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
                     LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
                     TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
     gene            20182..21309
                     /locus_tag="JNZ89_002002"
     CDS             20182..21309
                     /locus_tag="JNZ89_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309887.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain-containing protein"
                     /protein_id="HAY8935895.1"
                     /translation="MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVI
                     LDEETLAPFLSWLVPARVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC
                     NYYSARLTPLPGPDSSRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTARDC
                     VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEV
                     EKLPEEYTKSSTAELCQLAETLSLHPISLSLLERLLNSTRVNTQPDNKLAALLCARIN
                     GSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVEHATVQAIQWLTRAPDRFS
                     TAQFSPLLEHEQSSTQIINLLVWSGLCGWINRLKIALGETY"
     gene            21377..23311
                     /gene="rnb"
                     /locus_tag="JNZ89_002003"
     CDS             21377..23311
                     /gene="rnb"
                     /locus_tag="JNZ89_002003"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HAY8935896.1"
                     /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
                     FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPD
                     HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP
                     WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALP
                     DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
                     EVRPVLACRMTLSADGAIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIA
                     EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA
                     MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
                     KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH
                     RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTDTRFAA
                     EIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDELVCSQENGTVQIKGETVYKVTDVI
                     DVTIAEVRMETRSIIARPVA"
     gene            complement(23389..23492)
                     /locus_tag="JNZ89_002004"
                     /pseudo
     CDS             complement(23389..23492)
                     /locus_tag="JNZ89_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791239.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         5310 a         6210 c         6115 g         5857 t
ORIGIN      
        1 gacgcgttac aagtttctgt aaatgagttg cggtaaatgt tccaccgtag atttcgtcca
       61 ggtaatcagt aattttctgt ttcatgttgc ctttcagtgg tagcgatccc atgaaacgag
      121 agactactcc gcagaaaata aactgtcaat tgagcacaag ggttttagtc acgcaggaaa
      181 tcatttttta ccagggaaaa agcgtatttg tgagctgacg caaataatct atggggatgt
      241 aaataaggtg tgacagaaaa aaaacggcgc ataagcgccg ctcatggtga attcttttaa
      301 cctttgacct tcggcattgc gatgtctttc aagccaccgg cgttctcaac gtgggtatat
      361 cccatctcgc taaggatctc ttttgcttgc cctgactggc gtccggcatt gcaatacact
      421 ttcacggtgt cgtttttatc cggaacggcg gtggcaatgc gctctttcac ttccttcagg
      481 ggaatattga tggccccctg aacgtgctct tgctgatact gctctggaac acgaacatcg
      541 atccagtgtt cagcggcgaa aacgggcagt gaaaacacca gtgccagagc aagtaagcct
      601 tttttaaaca tgtaagcgtc cttctatgga tgaaaattgc catccattat acgcctgaga
      661 tttaacaatt tttgcgaaac tcccctcacc ttttataacg ctgtgccagt ttattagcag
      721 cccgacttaa cagcggttcc agcgccacag ccagcaacat tttcagcggt cggcgagcaa
      781 ctgattttat cgcccagccc gctacacccg ccgggccata gcgcagtgcg gtaagaagta
      841 ccagcttgcc tgctaatttg aaaccaggct ttaccttttg cccggcctgt tgccagcgag
      901 tattcataac tttcctcaca gttgacggaa acggctacgt aacgtgaaag tatcggaagt
      961 gacataacgt tccatctcgc gtaaacgcgt ttcacttgcc gccagttcac ggtcgacttc
     1021 atccagcaat tcgctgctgg agggtagctg ctcaccaaag gccatgttgt ccggcattgg
     1081 atcaagcgca aatgacaaaa tgatgtaagc aaccagggta aacagcgcca gaccgaagaa
     1141 aatcgacagc accaccagga tacgcaccag ttttaccggt acatcaaaat agttggcaat
     1201 cccggcgcag acgccgcgga ccatgccctg ctgtggaata cgccataatt ttttattgag
     1261 attaatgccc gccattagcg atccctccag ttcggatgtt ctgcatcaag aatagattcc
     1321 agcgcctgaa tacgttcgcg catccgtttt gcttcatcag ccagttgcgc taatcgctgc
     1381 tgctcacttt gcgacaattc actgcgacca gaacgattgc tgtaatgcag ccataaccag
     1441 atcggtaaaa caaacagcac aaaaatggtt aacggaatag ccagaaatag cgcgctcata
     1501 agtactcctt agacgatgag cggcggcgcg ttcggacgcc gcctagatgt tattattgat
     1561 tgtcttgctt cattttggct tttaattgtg ccagttgttc gctgattgca tcatcggctt
     1621 tcagttcggc aaactgatcg tccagcgatt tttgtttacc gaagctgtgg ctttctgctt
     1681 ccgcttccat ctggtcaata cgacgttcga aagattcgaa acgagccatt gcttcatcca
     1741 gtttgccact gtccagctga cgacgcacat cgcgcgacga gtttgccgcc tgatggcgta
     1801 acatcaatgc ctgctggcga gcgcgtgttt cgctcaattt gttttccagc tcaccgctct
     1861 ctttcttcat gcgtgccagc gtatcgtcca ccagcgtcac ttcatgttcc agactcttaa
     1921 tcagatcggt cagtttctgt ttttcaatta acgccgcacg tgccaaatcc tctctctctt
     1981 tcagcagcgc cagttcggct ttttcctgcc attcaacttc acgcgccgac gcttgttcaa
     2041 tacggcgagt cagctgtttc ttttctgcca acgcacgcgc cgaagtagaa cgtacttcaa
     2101 ccagtgtatc ttccatctcc tggatcatca gacgcaccag tttctgtgga tcttccgctt
     2161 tctctaacag agcgttgatg ttggcattca cgatgtcggc aaagcgagaa aaaataccca
     2221 taatgttgtc ctcttgattt ctgcgttcag gattgtcctg ctgaactgtt aatacaattt
     2281 gcgtgccaat tttttatctt tttgatttat aaagatctga ttgaagaatc atcagcaaca
     2341 tgccaggatg aattagcgaa ttacactaac aagtggcgaa tttcatcatg gcagaataca
     2401 aagataattt acttggtgag gcgaacagct ttctcgaagt gctggaacag gtttcgcatc
     2461 tcgcaccgct ggacaaaccg gtgctcatca tcggcgaacg cggcaccggt aaagagctga
     2521 ttgccagccg cctgcattat ctctcctccc gttggcaagg gccgtttatt tcccttaact
     2581 gcgcggcgtt aaatgaaaat ctgctggatt ccgaactgtt tggtcacgaa gcgggggcgt
     2641 ttaccggtgc gcaaaaacgt catccaggga gatttgaacg tgccgacggc ggtacgctat
     2701 ttcttgatga actcgctacg gcaccgatga tggtgcagga gaaattattg cgcgtgattg
     2761 agtacggtga actggagcgc gttggcggca gccagccatt gcaggtgaat gtgcggttgg
     2821 tatgcgcgac gaatgccgat ctcccggcga cggtcaatga aggcactttt cgcgctgacc
     2881 tgctcgaccg actggctttt gatgttgtac aactgccacc actgcgcgag cgcgaaagcg
     2941 acataatgtt gatggcagaa cactttgcca tccagatgtg tcgggaaatc aagctgcctc
     3001 tgttcccggg gtttacggag cgcgccagag aaacattgct gaattatcgt tggccgggaa
     3061 atattcgtga attgaaaaac gtggtggaac gttcagtgta tcgccacggc accagcgatt
     3121 atccgcttga tgacatcatt attgatccct ttaaacggcg tccgcctgaa gacgctatcg
     3181 ccgtttcaga aaccacctcg cttccaacac tgccgctgga tttacgtgag tttcagatgc
     3241 agcaggaaaa agagttgctg caactcagtt tgcaacaagg gaaatataac cagaagcgcg
     3301 cggctgaatt actggggtta acttatcatc agttccgcgc gttgttgaaa aagcaccaga
     3361 tttagcgaag ttgagcaata caacttgccg gatgcggcgt gaatgcttta ttcggcatac
     3421 ataatcaata agtcgtttgc aggcctgata agcgcagcgc atcagacatt attgcgttgg
     3481 gctattaatc gctcagcgca tcctgcaaaa ttttcattgc cgcatcgaat tgcgcatccg
     3541 gaatggtcag cggatacagg aagcgaatca cgttgccgta tgcgccacag gtcagcagga
     3601 gcagcccctg cgccagcgcg cgttgctgga ttttctgtgc aatcgccgct gacggctcgc
     3661 ccgtttgcgg atcgttaaac tctgccgcaa tcatcgaccc caggccgcgt accgcagcaa
     3721 tggccggaac gctttctttg gcatcaatca acgtgttttt gagacgctgg cccagttgat
     3781 tcgcgcgttc gcagagtgat tctttgtcga taatattgag caccgcgtgc gcggcagcca
     3841 ccgccagcgg gttcccggcg taggtgccac ccaacccgcc cggcgcgggc gcgtccataa
     3901 tattcgcgtt accgaccacg cccgaaagcg gcatcccgcc cgcgaggctt ttcgccatcg
     3961 tcattaagtc cggcttatcg gcgtaatgat ccatggcaaa cagtttaccg gtacgcgcaa
     4021 agccgctttg cacttcatcg gcaatcatca caataccgtg ctcgtcgcac aggcggcgaa
     4081 tggcggcaac cagctctttt ggcgcaacgt tgaaaccgcc ctcgccctgc accggttcga
     4141 aaataatggc cgccacctgc ttcgcttcaa tgtccgattt aaacaagcgt tcgatggcgt
     4201 cgagggagtc ctgtgttgaa atgccgtgta aatctgacgg ataaggtacg tgatacaccg
     4261 aaccagggaa cgggccgaag ccgattttgt acggcgcaac ttttccggtc agcgccatgg
     4321 tcatatatgt acgaccgtgg aagccgccgc taaacgcaat cacgccaggt cgtccggtat
     4381 gggcgcgagc aattttcacc gcgttttcca ccgcttccgc gccggtagtg aagaatgcgg
     4441 ttttagcctg cccgctcact ggggcaaggg cgttaatttt ctccgccagc gtgacgtagc
     4501 tttcgtacgg cacaatctga tacgccgtgt gggtaaactg ttgcaattgc tgctccaccg
     4561 ccgcgaccag atcagggtgg cgatgcccgg tattcagcac cgcaatgcct gcggcgaaat
     4621 cgatgtattc gttgccctct acgtccttca gcgtagcgtt ttctgccgac tgggcgaaga
     4681 agttacacat cacgccaacc ccgcgtgggg tagcagaaag acgacgctga tggaattcat
     4741 tgttgctcat gtttcacacc ttttgactct tcactgttaa tcggaaatta aacgcccaga
     4801 cgatcgcgca ggctgtaata agccgcgccc atcgcggtaa atggcacgcg cagcgtgcgc
     4861 ccgccgggga acgggtaatg cggcagattg gcgaaggcat cgaaacgctc ggcgtcaccg
     4921 cgcagcagtt cagcaatcaa acgcccggcg aggtgggtac aggtgacgcc gtggccgctg
     4981 tagccctgca tgtaatagat gttggtatcg aggcgaccga actgcggcat ccgtgaaagg
     5041 gtcagcagga agttgcccgt ccagcgatag tcgattttga cgcccttcag ctgcgggaag
     5101 gttttcagca gtttcggcac aacaagacgc tcaacgtcat ccgggtcgcg cgcgccgtag
     5161 accacgccgc cgccgtacag caaacggttg tcggcggtaa gacggtagta atcaagcaga
     5221 taattacagt cttccacaca gtagtttttc gggatcagcg aacgggctaa atcttccgac
     5281 agccgttcgg tggtgatcac ctgcgtgccg cacggcatgc tgcgtttcgc cagttccggc
     5341 tctactttat cgcccagata cgcattcccg gcgacaatca catacttcgc cgtcacctga
     5401 cctttggcag tgcgcacaac ggctggcgtg gtgtgctgga tctgcgtcac ggcagaaagt
     5461 tcatacacgc gcccgccgtt gaggcggatg gcgtccgctt cgccaatggc gaggtttagc
     5521 gggtgaatat gcccaccgct gtgatccagc agcgcaccgg tatagcgatc gctggctact
     5581 tcacggcgaa tggcgttggc gtccagcaat tccagctgtt tattgccgta gcgttcccag
     5641 ttctctttct gctcttcaag tgtggcgagc tgtttatcat tcatcgccac aaacaggctg
     5701 ccggggcggt agtcgcagtc aatctgataa cgtttgatac gttcgcggat gatctcacca
     5761 ccttcgaaca tcatgctgcc gagcataggg gctgtgtcca tgccgtagct tttttcgatc
     5821 acgtcgatgt cgcggttgta ggagttcaca agctgcccgc cattgcgccc gcttgcgcca
     5881 aagccgatgc gtgaggcttc gagaaccact acgtcaaagc ccgcttccgc cagatgcagc
     5941 gcggaggaga gcccggtata gccgccgcca accacgcaaa cgtcgcaggt gattgactca
     6001 ttcagggtgt cgaatggcac gtatttatgc gtaataactg ctggtatgtt cggtcatttc
     6061 aggcctccag gcttatccag atggttttca gttcggtgaa tttttcaagg gcatgcaggg
     6121 atttgtcgcg accgttgccg ctctgcttat agccgccaaa cggcacggtc atatcgccgt
     6181 cgttgtagtt attgacgaag acggaaccgg ctttcaggcg gcggctcata cggtgcgcgc
     6241 gggagaggtc gcgcatccat accgccgcgc caaggccgta ctggctgtcg ttggcaagct
     6301 gtagcgcctg ttcttctgat gtgaaacgcg tgaccaccag caccggaccg aaaatctctt
     6361 cgcggcttaa ggacgcattc gggtctacat ccacaaagat ggtcgggccg atggcggcag
     6421 ccagcccggc gttacggcca tccagcagca gttgcccttt gccttcgccc tcacgaataa
     6481 agctatggac cgagtcggcg tgggcgcagt cgattaaagt gcccatggtg gttgcggggt
     6541 caagcggatg gcccggctgc cagttttgcg cctgctgttt taacagggct aagaattcat
     6601 cggcgatgct ctcttccagc aacaggcgtg ttccggcgat gcacacctga ccctggttgt
     6661 agaagatgcc tgctgcggtg gagctcgccg ctttttgcag atccgaacaa tcggagaaaa
     6721 cgatgttggc gcttttgccg cccgcttcca gccagacgcg tttcatgttg ctgtcgcccg
     6781 catctttcag cagctgtttc ccggtacggg ttgaaccggt aaaggcaatg gcgtcgatat
     6841 cgttatgacg cgacagcgcc tgccccgctt catgaccaaa acccgtcacc acgttcaaca
     6901 caccatccgg caagcctgct tctttcgcca gccccgcgag acgaatcgca ctgagcggtg
     6961 atttttcaga cggttttaga atcacgctgt ttcccgccgc cagcgccggg ccgagtttcc
     7021 agcaagtcag caacagcggg aagttccacg gcacgatggc ggcaatcacg ccgaccggtt
     7081 cacgcacgat catcgccagc tcatggctac tggtggtcgc cacttcgcca tacactttgt
     7141 cgatcgcttc ggcgtaccag cgaatggcgc gcgccgcgcc gggaatatca tcacgcagac
     7201 tgtgacgaat cggtttgccg gtgtcgagag tttccagcag tgccagctct tcggcgtggg
     7261 cttccattaa atcggcgagt ttattcagta ccgctttacg tttagccgga gaagagagtg
     7321 accagtcgcc gcgttcaaat acgccgcgtg ctgcgctcac cgcacggtcg atatcgacgc
     7381 tcttgccgcg ggcaattttc gccagcggtg cctgggtgac tggatcaacg gtttcaaagg
     7441 tttcattttc cgccgcagca gtatattcac cgttaataaa taagcggttt tcaatggcga
     7501 gacttaacgc tttatcctgc cagtaagcca gatgatgaaa attcattatg actcctgttt
     7561 cacgtctatc agatatatgc agtttgtgaa cgtcagggcg cagagatccc cgggccgtat
     7621 gcccgtttat ttctggcgac attctttata tacacttcat ccttcaagcc gcctctgcct
     7681 tggctgcgtt cgctcccccg aatcacttac ctgagtaagc tcatcgggat tcgctcactt
     7741 gccgccttga tgcaacttga atgattttgt gtatagattg ccgggcgcat tgcgcttacc
     7801 cggcttacag aacaaaaaga ttaaaacgtg gtgggcgtat gggcgctgat aattcggcaa
     7861 atacctgccg acgtattact gaaactgtgc gggatgccgg tattaatggc ataactttga
     7921 cccgcgacga ggtggtaatc ctgaccatta atcgtcagaa caatttcacc ttccagtact
     7981 gtgcctattt cctcaccctg atgcttaatt ctttccccag tggttgtgcc cggctggtac
     8041 gtttcaaaga tcatcgccag cgtgcgattc gggttaccgt tatgaaccag cttcattgac
     8101 acaccctgac tgcccatctc aattaagtcg tcctgattaa tgacgacctg cggctcatca
     8161 ggtttttccg gctcggaaaa gaattccgag agtgacagac catacacctt cagcagcttt
     8221 tgcagcgtac tgatggcagg gctgacttta tcttgttcta tcgtactgat agcactgtga
     8281 gtcagcccgg agagttcggc ggcacgacgt tgtgaaagcc cctgctgctg gcggatttcc
     8341 gacaagcgtt ttcctggcgc cagtccctca tcactcatat ttgcatttcc ttaaactgta
     8401 gtggtcagag tcgctgtttt tcagcgatat ggtgctgaca agcggtgata aagccctcga
     8461 acaatatacg cgaaagagcg tactcgctac tgttccattc cgggtgccac tgtacgccca
     8521 gcgcaaaagg atgattgatg acgctaaccg cctcaactaa gccatccggc gagcgagctt
     8581 caacacgcaa ccgtgggcta acgaccttcg ccccttgtcc atgtagagag tttacccaaa
     8641 agttgctaca ttcaggtaac aacgcagaca gtaatccccc ctcttcaacc tgaacttcat
     8701 gcgacggtgc atattgctgt tccaccggca gttcggatct tcccgatgtt ccagcaattc
     8761 aggctgttcg cacagcttgc gatgcaacga accaccggtt gccaccacca gttcttgtaa
     8821 accccggcag atggcgaaaa tggggatgcg cctttcgagt gcggcattaa ttatcgccat
     8881 gctcagaaga tcacgcccgg gatcggcgtc aggctcatcg ccgttttcac catataggtg
     8941 cggctgcaca ttgctgggac taccaggaag ataaatgcca tcgagtttcg gcaaaagttg
     9001 ttcaagtaac gacggttccg ccagcgcatg tggtagcgca attggcaagc cgcctgcgtg
     9061 gatgatggca ttcaggtact tttcttgcag agtctgggtc gcatgaccct taagcctgtt
     9121 cctgcacatt acgacaccga taaccggatt gttcattata tttttcatgc tcaatctcac
     9181 aaagtggact aaattatcgc cattactgcg ctttaaatga cctttatgtt caatattttt
     9241 tcaatctagc agtgggtttt catttttgca aactaaattt aacatttagc aaacatttag
     9301 tttgcataca gattcgaatg gtggtcatta tattttacgc tttgataacg agcggaaaac
     9361 aaaccaaagg cgaagaatca tggaaaccaa tatcgttgaa gtagagaact ttgttcagca
     9421 gccagaagag aggcggggta gcgcctttac gcaggaagtg aaacgctacc tggagcgcta
     9481 cccgaatacg caatatgttg atgttttact tactgatttg aatggttgct tccgtggaaa
     9541 acgtatccct gtttcaagcc tgaagaagtt ggagaaaggg tgttatttcc cggcctcggt
     9601 gtttgcaatg gatattctgg gcaacgtagt agaagaagcg ggtctgggtc aggaaatggg
     9661 cgagccggat cgtacttgtg ttcctgttct cggttcctta accccttctg ccgccgatcc
     9721 agagtttatc ggtcagatgc tcctgaccat ggtcgatgaa gatggcgctc cctttgacgt
     9781 tgagccgcgg aacgttctta accgcctgtg gcagcagcta cgccagcgcg gattgttccc
     9841 ggttgtagcg gtagagctgg agttctattt actggatcgt cagcgcgacg ctgaagggta
     9901 tctgcaaccg ccctgcgcgc ccggcaccga taaccgcaat acacaaagcc aggtttactc
     9961 cgttgataac ctcaaccact tcgccgacgt gctcaatgat attgatgaac tggcgcagtt
    10021 acagttaatt cccgccgacg gtgcggtcgc cgaagcctcg ccgggtcagt ttgaaatcaa
    10081 cctttaccat accgataacg tgctggaagc ctgcgatgat gcgctggcgc taaaactcct
    10141 ggtgcgtctg atggcagaaa agcataagat gcactccact tttatggcga agccgtatga
    10201 agagcacgcg ggcagcggga tgcatatcca tatcagtatg caaaataatc gtggcgagaa
    10261 tgtgctttct gacacagaag gcgaagattc gccgctgctg aaaaagatgc tcgccgggat
    10321 gattgacctg atgccgtcgt cgatggcgtt gctggcacca aacgtgaact cgtatcgccg
    10381 cttccagccg ggaatgtatg tgccgacgca ggcgtcgtgg ggccataaca accgcaccgt
    10441 cgccctgcgt attccgtgcg gcgaccgtca taatcaccgc gtggaatatc gcgtggcggg
    10501 tgccgatgcc aacccatatc tggtgatggc agcgattttt gccggtattt tgcatggcct
    10561 tgataacgag ctgccgttgc aggaagaagt cgaaggcaac gggctggaac aggaaggctt
    10621 acccttcccg attcgccaga gcgatgccct gggtgagttt atcgagaatg atcacctgcg
    10681 ccgctattta ggcgaacggt tttgccatgt gtatcacgcc tgtaaaaatg atgagctgtt
    10741 gcagtttgag cgcctcatca cagaaacaga aattgagtgg atgttgaaaa acgcatagta
    10801 ccccttgcgg ggttgtttca tcgacctgag cggagccagg cctgacattt gctggtaatc
    10861 cagacatttc ccggatgtcg cgttatggag cgcaggcggc aacgggcttc cgttaacgat
    10921 taagactgtg acgaggaaat gagatgatgc cgatgattaa atccccgcat ggcgagggag
    10981 gctgcgtatg cgcccctcct gctactgact ggactccgtc ccctttgctt cccttgctaa
    11041 acaggtttga tttcaggtcg acacgaccgc aaaccttatt acgcaggggg aggcagcaat
    11101 tatggctatt aattcaccac tgaatattgc tgcgcaaccc ggcaaaaccc gtctgcgaaa
    11161 atcactgaaa ttgtggcagg tggtgatgat gggtctggcc tatctcacgc cgatgaccgt
    11221 atttgatact tttggtattg tctccggcat tagcgacggt cacgttccgg cgtcctattt
    11281 gctggcgctg gcgggcgtgc tgtttaccgc tatcagctac ggcaaactgg ttcgccagtt
    11341 tccggaggcc ggttcggcct atacctacgc gcaaaagtcg attaacccgc acgtcggatt
    11401 tatggtcggc tggtcatcgc tgctggatta tctctttttg ccgatgatca acgtcttgtt
    11461 ggcgaaaatc tatctctccg ccctcttccc ggaagtgccg ccgtgggtgt gggtagtaac
    11521 cttcgtcgcc attttaaccg ccgcgaatct gaagagcatc aacctggtcg ctaacttcaa
    11581 taccctgttt gtactggtgc aaatctccat catggtggtg tttatcttcc tggtagttca
    11641 gggactgcat aaaggagaag gcgttggcac cgtctggtca cttcagccgt ttatcagcga
    11701 gaacgcgcac ctgatcccga ttattaccgg ggcgacgatt gtctgtttct ccttcctcgg
    11761 tttcgatgcg gtgaccacgc tttcggaaga gacgccggac gccgcacgcg tgatcccgaa
    11821 agccacttcc tgacggcggt ctacggtggc gttatcttta tcgcggcgtc gttctttatg
    11881 cagctgttct ttcccgatat cagccgcttt aaagatccgg atgccgcact gcctgaaatt
    11941 gcgctgtacg tcggcggcaa gctcttccag tcgattttcc tctgcaccac gtttgtgaac
    12001 acgttagcct ctggcctggc ttcacatgcc agcgtgtcgc gtctgctgta tgtgatgggg
    12061 cgtgacaatg tgtttccgga gcgcgtgttt ggctatgtgc acccaaaatg gcggactccg
    12121 gcactcaacg tcattatggt cgggattgtc gcgttgtcgg cgctgttctt cgatttagtt
    12181 accgccacag cgttaattaa cttcggtgct ctggtggcgt ttaccttcgt gaatctgtcg
    12241 gtgtttaatc atttctggcg gcgtaaagga atgaataaaa gctggaagga tcacttccac
    12301 tatttgctga tgccgctggt tggcgcgctg acggtgggtg tgctgtgggt taacctcgag
    12361 tcaacgtcac tgacactcgg tctggtatgg gcttcgttag gcggcgcata tttatggtat
    12421 ctgatccgcc gctatcgcaa agtgccgttg tatgatggtg acagaacgcc ggtgagtgaa
    12481 acgtaatagt cggatgcgcg gcgcattatc ctgccggagg gtaatgcacc gcgccattaa
    12541 ctataaaaag atgtatgacc cggatcacga gtgctatcat ccgcccttat gcttagcgca
    12601 ttaaccccag gggcaaataa tgaaccacga tatcccgcta aaatattttg atattgccga
    12661 tgagtacgcg accgaatgcg cagagcctgt cgcagacgct gaacgcacac cgctggccca
    12721 ctacttccag ttactgctca cccgtttgat gaacaatgaa gagatcagcg aagaagccca
    12781 acatgaaatg gctgctgaag cggggattaa tcccgtacgc attgatgaga tcgcagagtt
    12841 tttgaatcaa tggggtaatg agtaattatt taattgcaga cgatcggtca gtatcgttgt
    12901 ccggataaag cgttcacgcc gcatccggct aacaatgaca cgcactgcag cgtgctttaa
    12961 tgggtttctc acgatcgtac cgctctgctc ctcgctgagt tgttctgtga gttatagtta
    13021 tagaggaagc acgggtacga atgttgaaca gatggcgacg ccacctgttc aacgaccaac
    13081 cacacggccc tcattacgac ccctgaacac aaacggtaat ggcaaatgtc attaaatatt
    13141 agtaagatag cctctttaca taaaatccct taatattatg cgccaggtat tatcgtctct
    13201 tttggtgatt gctggacttg tgagtggtca ggcaatcgcc gcgcctgaat cccccccgca
    13261 tgctgatatc cgcgacagcg gttttgtcta ttgcgtcagc gggcaagtca acacctttaa
    13321 cccatccaaa gcgagcagtg ggttaattgt cgataccctt gccgcccagt tttatgatcg
    13381 actgctggat gtcgatccct atacctatcg cctgatgccg gaacttgccg aaagctggga
    13441 agtactcgac aacggcgcga cctatcgctt ccacctgcgt cgcgatgttc cgtttcaaaa
    13501 aaccgactgg tttactccca ctcgtaaaat gaatgccgac gatgtggtgt ttaccttcca
    13561 gcgaattttt gaccgcaaca acccgtggca taacgtcaac ggcagcaact tcccctactt
    13621 cgacagcctg aaatttgccg ataacgtgaa aagcgtccgc aaactggata atcataccgt
    13681 tgagttccga ctcgcccagc cggatgcttc ttttttgtgg cacctcgcaa cccattatgc
    13741 ttcggtcatg tcggcagaat atgcccggaa gttagagaaa gaagatcgcc aggagcaact
    13801 cgaccgtcaa ccggtcggca ccggtccgta tcagttgtcg gaataccgcg ccgggcaatt
    13861 tattcgccta caacgtcatg atgacttctg gcgcggtaaa ccgttaatgc cgcaggtagt
    13921 ggtggattta ggctccggcg gcaccggacg tctgtcgaaa ctcctgaccg gggaatgcga
    13981 cgttctggcc tggcctgctg ccagccagct atccattttg cgtgacgacc cgcgcttgcg
    14041 tttaacgctg cgtcctggga tgaacgtcgc ctatctggca tttaacaccg ccaaaccgcc
    14101 gctaaataat cccgctgtcc gccatgcact ggcactggcg attaataacc agcgcctgat
    14161 gcaatccatc tattatggta cggctgaaac ggcggcctct attttaccgc gcgcctcgtg
    14221 ggcctatgac aacgaggcta aaattactga atacaatccg gcgaaatcgc gcgaacagtt
    14281 gaaggcgttg gggctggaaa acttaacgct gaaactgtgg gtgcccacac gttcgcaggc
    14341 gtggaacccc agtccactga aaactgccga actgattcag gcggatatgg cgcaggttgg
    14401 cgtaaaagtg gtgattgtgc cggtagaagg tcgctttcag gaggcacggt tgatggatat
    14461 gagccatgat ctgacgttat ccggttgggc gacggacagt aacgacccgg acagtttctt
    14521 ccgtccttta ctgagctgcg cggcaattca ttcacagacc aacctcgccc actggtgcga
    14581 tccgaaattc gacagcgtgt tgcgtaaggc gctctcctcg cagcagctgg cggcgcgtat
    14641 tgaagcctat gacgaagcgc agagtattct ggcgcaggaa ttgcccattt tgccgctggc
    14701 gtcgtcattg cgtttgcagg cctatcggta cgatatcaaa ggtctggtac ttagcccgtt
    14761 tggtaacgcc tcctttgctg gggtgtatcg cgagaaacag gatgaggtga aaaaaccatg
    14821 attatcttca ccttacgccg cattttgtta ttgattgtca ccttgttcct gctgaccttc
    14881 gttggcttca gcttgagcta tttcacccct catgcgccgt tacaaggcgc gtcactgtgg
    14941 aatgcctggg tgttctggtt taacggcctg atccactggg attttggtgt ttccagcatt
    15001 aacggtcaac cgattgccga acagttaaaa gaggtcttcc cggcgacgat ggaactgtgc
    15061 atcctcgcct tcggttttgc gctgattgtt ggcatccccg tggggatgat tgccgggatt
    15121 acgcgccata agtggcagga taacttgatc aacgccatcg ccttactggg cttttcaatc
    15181 ccggtgttct ggctggcgct tctgttgacg ctgttttgtt cactcacgct aggttggttg
    15241 cccgtttcag ggcgtttcga tctgctctac gaagtgaaac cgattaccgg ttttgcgttg
    15301 attgatgcct ggctttcgga ctcaccatgg cgggatgaaa tgatcatgag cgcaatccgc
    15361 catatgatat tgcccgtgat caccctgtcg gttgcgccaa caactgaagt gatccgcctg
    15421 atgcgtatca gcactatcga agtgtatgac cagaactatg taaaagcggc ggcgacccgc
    15481 ggtttgtcgc gctttactat tttgcgtcgc cacgttctgc ataacgcgtt accgccggtt
    15541 attcctcgcc tgggcttaca gttttccacc atgctgacgc tggcgatgat caccgaaatg
    15601 gtttttagct ggccgggttt agggcgctgg ttaattaacg ccatccgcca gcaggattac
    15661 gcagccattt ccgccggagt gatggtgtgt ggctcactgg tcattattgt taacgtgatt
    15721 tctgatattt tgggtgccat ggctaaccct ctgaaacata aggaatggta tgccttacga
    15781 tagcgtatac agcgaaaagc gcccgccggg cacgctgcgt accgcctggc gcaaatttta
    15841 tagtgacgcc tctgcgatgg tcggcctgta cggctgcgcg gggctggctg tactgtgtat
    15901 ttttggcggc tggtttgcgc cttacggcat cgaccagcaa tttctcggtt atcaattatt
    15961 gccgccatca tggtcgcgct atggcgaagt ttctttcttc ctggggactg acgacctcgg
    16021 acgcgatgtt ttaagccgtt tactgagcgg agctgcgcca accgtgggtg gcgcatttgt
    16081 ggtgacgctt gccgcgacga tctgtggcct agtactgggc accttcgccg gggcgacaca
    16141 cggcctccgc tcagcggtgc ttaaccatat tctggatacc ttactggcaa tcccttcgct
    16201 gctgttggca attatcgttg tagcgtttgc cggaccgagt ttgtcccacg ctatgcttgc
    16261 tgtctggctg gcattgctgc cgcgtatggt acgttcgatt tacagcatgg tgcatgacga
    16321 actggaaaaa gagtacgtta tcgccgcccg tctggatggc gcatcaacgc tgaatattct
    16381 ctggtttgct gtgatgccaa acatcaccgc cgggctggtc accgagatca cccgcgcact
    16441 gtcgatggca attctcgata tcgccgcgct gggctttctc gatctcggcg cacaactccc
    16501 ctcgcctgaa tggggagcga tgctcggtga tgcgctggaa ctgatttatg tcgccccgtg
    16561 gactgtcatg ctgccaggtg cggcaattat gattagcgtg ttgttggtta acctccttgg
    16621 cgatggcgtt cgtcgtgcga ttattgcggg ggtggaataa tgccattact cgatattcgt
    16681 aacctgacca ttgaatttaa aaccggtgat gagtgggtta aagccgtcga ccgggtaagt
    16741 atgaccttaa ccgaaggtga aatccgcggt cttgttggtg aatccggttc cggcaagagt
    16801 ttgattgcga aagcgatttg tggggtgaat aaagataact ggcgtgttac tgctgaccgt
    16861 atgcgttttg atgatatcga tttgctgcgt ctctccgcac gcgaacggcg caaactggtt
    16921 ggccataacg tgtcgatgat tttccaggaa ccgcagtcgt gtcttgaccc ttcagaacgt
    16981 gtgggtcgcc agttgatgca aaacatccca gcctggacct ataaaggccg ttggtggcag
    17041 cgttttggct ggcgcaaacg ccgtgccatt gaactgctgc accgcgtggg gattaaagat
    17101 cacaaagatg cgatgcgcag ttttccctat gagttgaccg aaggtgaatg tcagaaagtg
    17161 atgatagcca ttgcactggc gaatcaaccg cgtctgctga ttgctgacga accgaccaac
    17221 tcaatggagc caacaaccca ggcgcaaatc tttcgcctgc tgacgcgtct caaccaaaac
    17281 agcaatacca ctattttgct tatcagccat gacttacaaa tgcttagcca atgggcggat
    17341 aaaattaacg tgctttactg cggtcaaaca gtggaaaccg cgccgagtaa ggagttggtg
    17401 acgatgccac atcatcctta tacccaggcg ctgatccgcg cgataccaga cttcggcagc
    17461 gcgatgccgc ataaaagtcg cctcaatacg ctgcccggcg ctatcccact gctggaacag
    17521 ttaccgattg gttgtcgtct ggggccacgt tgcccgtatg cacaacgaga atgcattgtg
    17581 acgccacgtt tgacgggggc gaaaaatcat ctctatgcct gtcatttccc gctgaacatg
    17641 gagaaagagt gagatgatcg aaacgctgct tgaagtgcgt aatttaagta aaacgttccg
    17701 ctaccggacc ggctggtttc gccgtcagac cgtagaagcg gtaaaaccct tgagctttac
    17761 gctacgtgaa ggccagacac tggcgattat tggcgagaat ggttcgggta aatccacgct
    17821 ggcaaaaatg ctggcgggaa tgatagagcc taccagcggc gagttattga ttgacgatca
    17881 tccactgcat tttggcgatt attccttccg cagtcagcgt attcgcatga tttttcagga
    17941 tccttcgacc tcgttgaatc cccgtcaacg tatctcgcaa attctggatt ttccactgcg
    18001 cctgaacacc gacctggaac cggaacagcg tcgcaaacag attattgaaa cgatgcgtat
    18061 ggttgggctg ctaccggatc acgtcagtta ctatccgcat atgttggcac ccggacaaaa
    18121 acagcgtctg ggtctggcgc gcgcgctgat attgcgccca aaagtcatta ttgccgatga
    18181 agcactcgct tcactggata tgtcgatgcg ttcgcagttg attaatctga tgctggagtt
    18241 acaggaaaaa cagggcattt cgtatattta tgttacccag catatcggaa tgatgaagca
    18301 cattagcgac caggtgctgg tgatgcatca gggcgaggtt gtcgagcgag gcagcaccgc
    18361 ggatgtgctg gcatcgccgc tgcatgaact caccaaacgg ctgattgccg ggcactttgg
    18421 cgaagcattg acagcggatg cgtggcgtaa agatcgctaa ttttctgaat cctccttcca
    18481 gattatccac ctcattctga caagagatta aatcttgtca gaatgaggtg atggataaaa
    18541 taaaatcaaa tgcgcgtgat ttaagacgca atctcacttt gcaggaacga aagctctggc
    18601 gatatcttcg cagccgacgt tttggtgatt tcaaatttcg ccgtcaacat ccggtgggga
    18661 gctacattct cgattttgct tgctgctcgg cgcgcgtagt cgttgagctg gatggtgggc
    18721 agcatgattt ggcagttgcc tatgatacca ggcgcactag ctggcttgag tcgcagggct
    18781 ggaccgtgct gcgtttctgg aataacgaga ttgattgtaa tgaggaggcg gtgctggaga
    18841 ttattctgca ggaactgaac cgccgatcac cctcaccctg aaagggcgag ggggccgacc
    18901 gagccgaata gctgttgtgg tgaaaacatg gagacagtgc tggagaatat tcggcaaggt
    18961 ctgaaccatc ccagccatcg ccataaaagg gttaggggct gtatgagcct gtttgttgct
    19021 ggggtaacaa tatttgcaca atatggtccc ctcgcccctc tggggagagg gttagtgtaa
    19081 ggggaaaagc gcccaccctg ccgcagcctg ctccggtcgg acctagcaac tatagctact
    19141 cacagccagg ttgattataa taaccattta tctgttcgta ctgtttacta aaacgacgaa
    19201 tcgcctgatt ttcaggcaca acaagcatca acaataagga ttaaagctat gggttttctt
    19261 tccggtaagc gcattctggt aaccggtgtt gccagcaaac tatccatcgc ctacggtatc
    19321 gctcaggcga tgcaccgcga aggagctgaa ctggcattca cctaccagaa cgacaaactg
    19381 aaaggccgcg tagaagaatt tgccgctcaa ttgggttctg acatcgttct gcagtgcgat
    19441 gttgcagaag atgccagcat cgacaccatg ttcgctgaac tggggaaagt ttggccgaaa
    19501 tttgacggtt tcgtacactc tattggtttt gcacctggcg atcagctgga tggtgactat
    19561 gttaacgccg ttacccgtga aggcttcaaa attgcccacg acatcagctc ctacagcttc
    19621 gttgcaatgg caaaagcttg ccgctccatg ctgaatccgg gttctgccct gctgaccctt
    19681 tcctaccttg gcgctgagcg cgctatcccg aactacaacg ttatgggtct ggcaaaagcg
    19741 tctctggaag cgaacgtgcg ctatatggcg aacgcgatgg gtccggaagg tgtgcgtgtt
    19801 aacgccatct ctgctggtcc gatccgtact ctagcggctt ccggtatcaa agacttccgc
    19861 aaaatgctgg ctcattgcga agccgttacc ccgattcgcc gtaccgttac tattgaagat
    19921 gtgggtaact ccgcggcatt cctgtgctcc gatctctctg ccggtatctc cggtgaagtg
    19981 gtccacgttg acggcggttt cagcatcgct gcaatgaacg aactcgaatt gaaataatca
    20041 ttctgttggt aaatattggg cggcgttctg ccgcccgtta tctctgttat acctttctga
    20101 tatttgttat cgccgatccg tctttctccc cttcccgcct tgcgtcagga taacgatttc
    20161 ctttacgacc aaggagcgcc catggaacaa cgccacatca ccggcaaaag ccactggtat
    20221 catgaaacgc aatccagtac tgcggagtat gacgttctgc ctctggtccc ggaagccgca
    20281 aaggtcagcg atccctttct gctcgacgtg atccttgatg aagaaacgct agctcccttc
    20341 ctttcatggc tggtccctgc gcgcgttctt gcagtggaat tgttccctga ccagcttacc
    20401 gtgacccgtt cacagacctt caccgcttat gaacgcttgt ctacggccct gacggttgct
    20461 caggtttgcg gcgtccagcg gttatgtaac tactattcgg cgcgacttac gccgctcccc
    20521 gggcctgatt cctctaggga aagcaatcat aggttggcac aaatcacgca atatgcccgc
    20581 caactggcta gctcgccttc tattatcgac aaccgatcgc gccagcatct gaatgacgtc
    20641 ggtcttactg ccagggactg tgtaatcatt aaccaaatca ttggttttat tggctttcag
    20701 gcgcggacca ttgcgacatt tcaggcttat ctcgggcacc cggtacgctg gttacccggt
    20761 ctggaaatac aaaactacgc cgacgcgtca ctgtttgctg atgaatcaat acgctggcga
    20821 agcagctatg aggtggaaaa actacctgaa gagtacacaa aaagttcaac agcagaactt
    20881 tgccaactgg ccgaaacact ctctctccac cctatttcac tttcccttct cgaaaggttg
    20941 ttaaacagta cacgggttaa tacacagccg gataataagc ttgcggcgtt gttatgcgcg
    21001 cggataaatg gcagtcctgc ttgttttgcc gcctgtatgg attcatcaaa tgaatataaa
    21061 aaaatcagcc cccttctgcg caagggcgaa aatgaaatta accaatgggc tgaccgtcat
    21121 tctgttgagc acgctaccgt tcaggcgata caatggctga cccgagcacc cgatcgcttt
    21181 agcaccgccc agttcagccc tttactcgaa cacgaacaat catcaacgca gattattaat
    21241 ctgctggtat ggagcgggct gtgtggctgg ataaatcgct taaaaatcgc gttgggtgag
    21301 acatattaac cttgccgcgt cagacagatt cgcgtaaaac tgtcagccgc tctaatggcc
    21361 accaaaatag acaattatgt ttcaggacaa cccgctgcta gcgcagctta aacagcaact
    21421 gcattcccag acgccacgcg ctgaaggggt ggtaaaagcc acagaaaaag gctttggctt
    21481 cctggaagtc gacgcgcaaa aaagttattt cattccgccg ccgcagatga aaaaagtcat
    21541 gcatggcgac cgaattatcg cggtgatcca cagtgaaaaa gaacgtgaat ccgcagagcc
    21601 agaagaactg gttgaaccgt tcctgactcg tttcgtgggt aaagttcagg gcaaaaatga
    21661 ccgtctggcc atcgttcctg atcatccact cttaaaagac gccattcctt gccgcgcagc
    21721 ccgtggcctg aaccacgagt ttaaagaagg cgactgggcg gttgccgaaa tgcgccgtca
    21781 tccgctgaaa ggcgatcgtt ctttctatgc tgaattgaca caatacatca cttttggtga
    21841 cgaccacttt gtaccgtggt gggttacact tgcgcgccat aatctggaaa aagaagcacc
    21901 agacggcgtc gctaccgaaa tgctcgatga aggtctggtt cgtgaagatc tgaccgcgct
    21961 ggattttgtc accatcgaca gtgccagcac agaagatatg gatgacgccc ttttcgctaa
    22021 ggcgttgccg gatgacaaac ttcagctgat tgtggcgatt gccgatccaa ccgcgtggat
    22081 tgctgaaggc agcaagctgg acaaagccgc gaaaattcgc gcattcacca actatctgcc
    22141 tggcttcaac atccctatgc tgcctcgcga gctttctgac gatctctgct cactgcgcgc
    22201 caatgaagtc cgcccggtac tggcatgccg catgacgctc tccgctgatg gcgccattga
    22261 agataatatc gaattctttg ccgccaccat cgaatccaaa gcaaagctgg tgtatgacca
    22321 ggtttctgac tggctggaaa ataccggtga ctggcagcct gaaagtgaag caattgccga
    22381 acaagtccgt ttgctagcgc aaatttgcca acgccgcggc gagtggcgtc ataaccacgc
    22441 actggtgttt aaagatcgcc cggattaccg ctttattctc ggtgaaaaag gtgaagtgct
    22501 ggatatcgtc gccgagcctc gtcgcattgc caaccgtatc gtcgaagaag cgatgattgc
    22561 cgctaacatt tgtgcggccc gcgtactgcg cgataagctc ggttttggca tctataacgt
    22621 gcatatgggc tttgatccgg cgaatgccga cgcgctggca gcgttgctga aaacgcacgg
    22681 tctgcatgtc gatgccgaag aagtgctcac gctggacggt ttctgcaaac tgcgtcgtga
    22741 actggacgcg caaccaactg gtttcctcga cagccgcatt cgtcgcttcc agtcatttgc
    22801 tgaaattagc actgaacccg gtcctcactt tggcctcggt ctggaagcat acgccacctg
    22861 gacttcgccg atccgtaaat atggcgacat gatcaaccac cgtctgctga aagcggttat
    22921 caaaggcgaa actgcgacgc gcccacagga tgaaatcact gtccaaatgg ccgagcgtcg
    22981 ccgtctcaac cggatggcag aacgtgatgt tggtgactgg ttatacgcac gcttcctgaa
    23041 agacaaagcc gggaccgaca cccgtttcgc agcggaaatt gtcgatatca gccgtggcgg
    23101 catgcgtgtg cgtttggttg ataacggcgc tatcgccttt attccggcac ctttcttaca
    23161 cgctatgcgc gatgaactgg tttgcagcca ggaaaacggc actgtacaaa ttaaaggtga
    23221 aacggtttac aaagtaactg acgttattga cgtcaccatt gccgaagtcc gcatggaaac
    23281 ccgcagcatt attgcgcgcc cggtcgcgta atctcctttc acggcctatt cctcatggat
    23341 gggccgttta tttccccgct ctaccttcgt tatatccagg cagatttttt aactgacttt
    23401 cgtttgaaaa ctggcgtttt tccaaaactg gattacaaat aaatatataa aaaaacaatg
    23461 cgtttagccg ccgttaattt catgtaagtc at
//
LOCUS       DADMIB010000055        23143 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.055, whole genome shotgun sequence.
ACCESSION   DADMIB010000055 DADMIB010000000
VERSION     DADMIB010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23143
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.055"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..562)
                     /locus_tag="JNZ89_002005"
     CDS             complement(<1..562)
                     /locus_tag="JNZ89_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8935897.1"
                     /translation="MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIF
                     SALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVST
                     SAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARIT
                     AVGGIAVMCLNLVLLLVSITILLLNGG"
     gene            complement(781..1758)
                     /gene="epmA"
                     /locus_tag="JNZ89_002006"
     CDS             complement(781..1758)
                     /gene="epmA"
                     /locus_tag="JNZ89_002006"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HAY8935898.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            2083..3891
                     /gene="frdA"
                     /locus_tag="JNZ89_002007"
     CDS             2083..3891
                     /gene="frdA"
                     /locus_tag="JNZ89_002007"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HAY8935899.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRMAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3884..4618
                     /locus_tag="JNZ89_002008"
     CDS             3884..4618
                     /locus_tag="JNZ89_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HAY8935900.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4629..5024
                     /gene="frdC"
                     /locus_tag="JNZ89_002009"
     CDS             4629..5024
                     /gene="frdC"
                     /locus_tag="JNZ89_002009"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HAY8935901.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPDAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            5035..5394
                     /gene="frdD"
                     /locus_tag="JNZ89_002010"
     CDS             5035..5394
                     /gene="frdD"
                     /locus_tag="JNZ89_002010"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HAY8935902.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5457..6590
                     /gene="blaEC"
                     /locus_tag="JNZ89_002011"
     CDS             5457..6590
                     /gene="blaEC"
                     /locus_tag="JNZ89_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HAY8935903.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6679..7129
                     /locus_tag="JNZ89_002012"
                     /pseudo
     CDS             6679..7129
                     /locus_tag="JNZ89_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7126..7443)
                     /locus_tag="JNZ89_002013"
     CDS             complement(7126..7443)
                     /locus_tag="JNZ89_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound-resistance protein
                     SugE"
                     /protein_id="HAY8935904.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7625..7771)
                     /gene="ecnB"
                     /locus_tag="JNZ89_002014"
     CDS             complement(7625..7771)
                     /gene="ecnB"
                     /locus_tag="JNZ89_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HAY8935905.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7882..8007)
                     /gene="ecnA"
                     /locus_tag="JNZ89_002015"
     CDS             complement(7882..8007)
                     /gene="ecnA"
                     /locus_tag="JNZ89_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HAY8935906.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(8059..8625)
                     /gene="efp"
                     /locus_tag="JNZ89_002016"
     CDS             complement(8059..8625)
                     /gene="efp"
                     /locus_tag="JNZ89_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HAY8935907.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8667..9716
                     /gene="epmB"
                     /locus_tag="JNZ89_002017"
     CDS             8667..9716
                     /gene="epmB"
                     /locus_tag="JNZ89_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HAY8935908.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            10090..10959
                     /locus_tag="JNZ89_002018"
     CDS             10090..10959
                     /locus_tag="JNZ89_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935909.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGSLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPSKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
     gene            complement(11162..11515)
                     /locus_tag="JNZ89_002019"
     CDS             complement(11162..11515)
                     /locus_tag="JNZ89_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HAY8935910.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQ
                     LIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFV
                     PTDSQIIGQVYKCPN"
     gene            complement(11653..13290)
                     /gene="groL"
                     /locus_tag="JNZ89_002020"
     CDS             complement(11653..13290)
                     /gene="groL"
                     /locus_tag="JNZ89_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010427772.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HAY8935911.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITE
                     GLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMM"
     gene            complement(13334..13627)
                     /locus_tag="JNZ89_002021"
     CDS             complement(13334..13627)
                     /locus_tag="JNZ89_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004391824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HAY8935912.1"
                     /translation="MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG
                     NGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            13903..15159
                     /gene="yjeH"
                     /locus_tag="JNZ89_002022"
     CDS             13903..15159
                     /gene="yjeH"
                     /locus_tag="JNZ89_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine/branched-chain amino acid
                     transporter"
                     /protein_id="HAY8935913.1"
                     /translation="MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWA
                     WPVLIILVFPIAIVFAILGRHYPCAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPA
                     ALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRSASSSANLQTVIAGLIVALIV
                     AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFP
                     RALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGY
                     LACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIH
                     ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKS
                     LYALIVLAGLWLLLPKRKTPENGIIT"
     gene            complement(15175..15651)
                     /gene="fxsA"
                     /locus_tag="JNZ89_002023"
     CDS             complement(15175..15651)
                     /gene="fxsA"
                     /locus_tag="JNZ89_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418564.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HAY8935914.1"
                     /translation="MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGM
                     SLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD"
     gene            15988..17424
                     /gene="aspA"
                     /locus_tag="JNZ89_002024"
     CDS             15988..17424
                     /gene="aspA"
                     /locus_tag="JNZ89_002024"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313147.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HAY8935915.1"
                     /translation="MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL
                     IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNI
                     QRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGA
                     YVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCIN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            17542..18843
                     /locus_tag="JNZ89_002025"
     CDS             17542..18843
                     /locus_tag="JNZ89_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HAY8935916.1"
                     /translation="MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGN
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIE
                     IKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVI
                     CKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML"
     gene            18959..19297
                     /gene="cutA"
                     /locus_tag="JNZ89_002026"
     CDS             18959..19297
                     /gene="cutA"
                     /locus_tag="JNZ89_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HAY8935917.1"
                     /translation="MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIP
                     GATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTD
                     YLSWLNASLR"
     gene            19273..20970
                     /locus_tag="JNZ89_002027"
     CDS             19273..20970
                     /locus_tag="JNZ89_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HAY8935918.1"
                     /translation="MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQN
                     QHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTL
                     PVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVSQQEQHT
                     AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMA
                     LTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLT
                     LMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYAL
                     GMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSA
                     LGVAFFGWAFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNF
                     TQIKTVDELNHALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQA
                     NITANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP"
     gene            21007..21582
                     /locus_tag="JNZ89_002028"
     CDS             21007..21582
                     /locus_tag="JNZ89_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8935919.1"
                     /translation="MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPD
                     KEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKQLARYQALSECVKNNRYPGCLFIA
                     ACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRML
                     VNRSQADVDTAHRLAEDILRFARCRQGGALT"
     gene            21689..21764
                     /locus_tag="JNZ89_002029"
     tRNA            21689..21764
                     /locus_tag="JNZ89_002029"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21722..21724,aa:Phe,seq:gaa)
     gene            21962..22933
                     /locus_tag="JNZ89_002030"
                     /pseudo
     CDS             21962..22933
                     /locus_tag="JNZ89_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311870.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
BASE COUNT         5782 a         5960 c         5724 g         5677 t
ORIGIN      
        1 gcccaccatt taataacaaa atagtaatgc ttactaacag caatactaaa ttcagacaca
       61 ttactgcaat accgcccacc gcagtaatgc gggcaatttt attaatcccc tttgaagcaa
      121 cgacggtgac cagaatcatc catgctactg ccagcagacc aaccacctgc gtaggctcca
      181 gtccggcaat acgccagtgc tgggtcatgt cgctaccata gaggaatgtt gagaacggta
      241 cccaaacttt cgcggaggta ctcaccatcc agatgatata agaggaaaac cacataaacg
      301 taccaatgaa ggcaaaacgt ggtccgacac tattattcat ccaggaatag ataccacctt
      361 cttctttgcg ataagcagct cccatttcag ccatcattaa ggcgaatgga ataaagaata
      421 acaatgcaga aaatatataa aagggaatcg cactataacc cattaagtaa taagccgatg
      481 ggctattggc aaatccaaat acggaagtaa agatcatcaa tatgagtcct atcagactca
      541 tcttttttat cgtgtgaggc atgaaaccat ccttcatttc agcgcgtgta taacacgtgc
      601 ccactgaact gcactgcgca acattgagca ggcagcgtaa aaaccaatac agaattgata
      661 cccggatgat atcaaatatc cagtcttaaa ttgtggcctt taacggaaaa atgaaaacat
      721 atgctacaga atggcgctta tcacgccatt cttcgctgtt aattcagtaa tttttcagaa
      781 ttatgcccgg tcaacgctaa aggcgatgac ttcagccagt gtctccgcgc ccagcgccaa
      841 catcaccaga cgatcaacac ctaatgccac gccggaacag tcaggcatac cgactttcaa
      901 ggcttcaatc agattctggt caatggggtg ctgcggcaaa ccgcgcgccg cgcgcttacg
      961 gttatcttgt tcaaagcgtt gttgctgctc acgggcatcc gttaattcat ggaaaccatt
     1021 cgccagctca atacctttat aataaacctc aaagcgttca gcgacccgat gatcttcggt
     1081 actgatttgc gccagtgatg cctggctggc tggaaagtgg tacacaaagg tcggtttttc
     1141 tttgccaata tttggctcta cgccaaaggt aaacagcaat tgtagcaacg tgtcgcggtc
     1201 ttcttcggta tcagcaacgt tactcaaatc cagtttcgct gcgacttccc gcagttgcgt
     1261 tttgtcggca gagagcgggt caatttccag ataacgcaag aaagcttgtt gataagaaag
     1321 gctttctgct gccgggcagt ccagcacctg ttgtaagaga tcgtccacct cgttcatcaa
     1381 ccggtacata tcatagtgcg gtcgatacca ctcaagcata gtgaactcag ggttgtgata
     1441 acgccccatc tcttcattac ggaagctgcg gcacagctgg aataccggcc cacaaccggc
     1501 aaccagcagg cgtttcatat ggtattccgg gctggtcatt aaccagagat tcatcccctg
     1561 cgaatgcccg gggccaacga aacgtgtctc aaacgggacc aaatgaatat cggttaccgt
     1621 cgcctggctc atacaaggcg tctccacctc cagcactcca cgatcagcaa agaaacgacg
     1681 gatctccgcc ataatcgccg cgcgttttaa taagttagga atggatgcgc tcggctgcca
     1741 ggatgccgtt tcgctcatag ttaaatctcc agtttttgac aagggcacga agtctactcg
     1801 caacgcgacg gcgagacaaa ttttacgcag gaatcaaaca gcggtgggca gtgactaaaa
     1861 aaagcacgat ctgatggttt agtaattaaa ttaatcatct tcagtgataa tttagccctc
     1921 ttgcgcacta aaaaaatcga tctcgtcaaa tttcagactt atccatcaga ctatactgtt
     1981 gtacctataa aggagcagtg gaatagcgtt cgcagaccgt aactttcagg cacttaccct
     2041 gaagtacggg gctgtgggat aaaaacaatc tggaggaatg tcgtgcaaac ctttcaagcc
     2101 gatcttgcca ttgtaggcgc cggtggcgcg ggattacgtg ctgcaattgc tgccgcgcag
     2161 gcaaatccaa atgcaaaaat cgcactaatc tcaaaagtat acccgatgcg tagccatacc
     2221 gttgctgcag aagggggctc cgccgctgtc gcgcaggatc atgacagctt cgaatatcac
     2281 tttcacgata cagtagcggg tggcgactgg ttgtgtgagc aggatgtcgt ggattatttc
     2341 gtccaccact gcccaaccga aatgacccaa ctggaactgt gggggtgccc atggagccgt
     2401 cgcccggatg gtagcgtcaa cgtacgtcgc ttcggcggca tgaaaatcga gcgcacctgg
     2461 ttcgccgccg ataagaccgg cttccatatg ctgcacacgc tgttccagac ctctctgcaa
     2521 ttcccgcaga tccagcgttt tgacgaacat ttcgtgctgg atattctggt tgatgatggt
     2581 catgttcgcg gcctggtagc aatgaacatg atggaaggca cgctggtgca gatccgtgct
     2641 aacgcggtcg ttatggctac tggcggtgcg ggtcgcgttt atcgttacaa caccaacggc
     2701 ggcatcgtta ccggtgacgg tatgggtatg gcgctaagcc acggcgttcc gctgcgtgac
     2761 atggaattcg ttcagtatca cccaaccggt ctgccaggtt ccggtatcct gatgaccgaa
     2821 ggctgccgtg gtgaaggcgg tattctggtc aacaaaaatg gctaccgtta tctgcaagat
     2881 tacggcatgg gcccggaaac tccgctgggc gagccgaaaa acaaatatat ggaactgggt
     2941 ccacgcgaca aagtttctca ggccttctgg cacgaatggc gtaaaggcaa caccatctcc
     3001 acgccgcgtg gcgatgtggt ttatctcgac ttgcgtcacc tcggcgagaa aaaactgcat
     3061 gaacgtctgc cgttcatctg cgaactggcg aaagcgtacg ttggcgtcga tccggttaaa
     3121 gaaccgattc cggtacgtcc gaccgcacac tacaccatgg gcggtatcga aaccgatcag
     3181 aactgtgaaa cccgcattaa aggtctgttc gccgtgggtg aatgttcctc tgttggtctg
     3241 cacggtgcaa accgtctggg ctccaactcc ctggcggaac tggtggtctt cggccgtatg
     3301 gccggtgaac aagcgacaga gcgtgcagca actgccggta atggcaacga agaggcaatt
     3361 gaagcgcagg cagctggcgt tgaacaacgt ctgaaagatc tggttaacca ggatggcggc
     3421 gaaaactggg cgaagatccg cgacgaaatg ggcctagcaa tggaagaagg ttgcggtatc
     3481 taccgtacgc cggaactgat gcagaaaacc atcgacaagc tggcagagct gcaggaacgc
     3541 ttcaagcgcg tgcgcatcac cgacacctcc agcgtgttca acaccgacct gctctacacc
     3601 attgaactgg gccacggtct gaacgttgct gaatgtatgg cgcactccgc aatggcacgt
     3661 aaagagtccc gcggcgcaca ccagcgtctg gacgaaggtt gcaccgagcg tgacgacgtc
     3721 aacttcctca aacacaccct cgccttccgc gatgctgatg gcacgactcg cctggagtac
     3781 agcgacgtga agattactac gctgccgcca gctaaacgcg tttacggtgg cgaagcggat
     3841 gcagccgata aggcggaagc agccaataag aaggagaagg cgaatggctg agatgaaaaa
     3901 cctgaaaatt gaggtggtgc gctataaccc ggaagtcgat accgcaccgc atagcgcatt
     3961 ctatgaagtg ccttatgacg caactacctc attactggat gcgctgggct acatcaaaga
     4021 caacctggca ccggacctga gttaccgctg gtcctgccgt atggcgattt gtggttcctg
     4081 cggcatgatg gttaacaacg tgccaaaact ggcatgtaaa accttcctgc gtgattacac
     4141 cgacggtatg aaggttgaag cgttagctaa cttcccgatt gaacgcgatc tggtggtcga
     4201 tatgacccac ttcatcgaaa gtctggaagc gatcaaaccg tacatcatcg gcaactcccg
     4261 caccgcggat cagggtacta acatccagac cccggcgcag atggcaaagt atcaccagtt
     4321 ctccggttgc atcaactgtg gtctgtgcta cgccgcgtgc ccgcagtttg gcctgaaccc
     4381 agagttcatc ggtccggctg ccattacgct ggcgcatcgt tataacgaag atagccgcga
     4441 ccacggtaag aaggagcgta tggcgcagtt gaacagccag aacggcgtat ggagctgtac
     4501 tttcgtgggc tattgctccg aagtctgccc gaaacacgtc gatccggctg cggccattca
     4561 gcagggcaaa gtagaaagtt cgaaagactt tcttatcgcg accctgaaac cacgctaagg
     4621 agtgcaacat gacgactaaa cgtaaaccgt atgtacggcc aatgacgtcc acctggtgga
     4681 aaaaattgcc gttttatcgc ttttacatgc tgcgcgaagg cacggcggtt ccggctgtgt
     4741 ggttcagcat tgaactgatt ttcgggctgt ttgccctgaa aaatggcccg gacgcctggg
     4801 cgggattcgt cgacttttta caaaacccgg ttatcgtgat cattaacctg atcactctgg
     4861 cggcagctct gctgcacacc aaaacctggt ttgaactggc accgaaagcg gccaatatca
     4921 ttgtaaaaga cgaaaaaatg ggaccagagc caattatcaa aagtctctgg gcggtaactg
     4981 tggttgccac catcgtaatc ctgtttgttg ccctgtactg gtaaggagcc tgagatgatt
     5041 aatccaaatc caaagcgttc tgacgaaccg gtattctggg gcctcttcgg ggccggtggt
     5101 atgtggagcg caattattgc gccggtgatg atcctgctgg tgggtattct gctgccactg
     5161 gggctgtttc cgggtgatgc gctgagctac gagcgcgttc tggcgttcgc gcagagcttc
     5221 attggtcgcg tattcctgtt cctgatgatc gttctgccgc tgtggtgtgg tttacaccgt
     5281 atgcaccacg cgatgcacga tctgaaaatt cacgtgcctg cgggcaaatg ggttttctac
     5341 ggtctggctg ctatcctgac agttgtcacg ctgattggta tcgttacaat ctaacgtatc
     5401 gccaatgtaa atccggcccg cctatggcgg gccgttttgt atggaaacca gaccttatgt
     5461 tcaaaacgac gctctgcgcc ttattaatta ccgcctcttg ctccacattt gctgcccctc
     5521 aacaaatcaa cgatattgtg catcgcacaa ttaccccgct tatagagcaa caaaagatcc
     5581 ccggtatggc ggtggcggta atttatcagg gtaaacctta ttactttacc tggggctatg
     5641 cggacatcgc caaaaagcag cccgtcacac agcaaacgtt gtttgagtta ggttcggtca
     5701 gcaaaacatt tacgggcgtg cttggtggcg atgctattgc tcgaggggaa atcaagttaa
     5761 gcgatcccgc aacaaaatac tggcctgaac ttaccgctaa acagtggaat gggatcacac
     5821 tattacatct tgcgacctac accgctggcg gcctgccatt gcagatgccg gatgaagtga
     5881 aatcctcaag cgacttgctg cgcttctatc aaaactggca gcctgcatgg gctccaggaa
     5941 cacaacgtct gtatgccaac tccagtatcg gtttgttcgg cgcactggct gtgaagccgt
     6001 ctggtttgag ttttgagcag gcgatgcaaa ctcgtgtctt ccagccactc aaactcaacc
     6061 atacgtggat taatgtaccg cccgcagaag aaaagaatta cgcctgggga tatcgcgaag
     6121 gcaaggcagt tcatgtttcg ccaggggcgt tagatgctga agcttatggt gtgaagtcga
     6181 ccattgaaga tatggcccgc tgggtgcaaa gcaatttaac cccccttgat atcaatgaga
     6241 aaacgcttca acaagggata caactggcac aatctcgcta ctggcaaacc ggcgatatgt
     6301 atcagggcct gggctgggaa atgctggact ggccggtcaa tcctgacagc atcattaacg
     6361 gcagtgacaa taaaattgca ctggcagcac gcccggtaaa agcgattaag cccccaactc
     6421 ctgcagtacg cgcatcatgg gtacataaaa cgggggcgac cggcggattt ggtagctatg
     6481 tcgcgtttat tccagaaaaa gagctgggta tcgtgatgct ggctaacaaa aactatccca
     6541 atccagcgag agtcgccgcc gcctgtcaga ttctcaacgc tctacagtaa aatttcatcg
     6601 ggtccgaatt ttcggacctt ttctgcgctt ttccttgctg tcatctacac ttagaaaaaa
     6661 accagtaagg aaacatttat gcgcctgctc cctctcgttg ccgcagcgac agctgcattt
     6721 ctggtcgttg cctgcagttc tcctacgccg ccgcgtggcg tgacagtggt gaataatttc
     6781 gacgctaaac gctatctcgg tacctggtat gagattgccc gttttgatca ccgttttgaa
     6841 cgtggactgg aaaaagtcac cgcaacatac agtctgcgtg atggcggcgg cctgaatgtc
     6901 atcaataaag gctataaccc tgacagagaa atgtggcagc agagtgaagg gaaagcgtac
     6961 tttaccggcg caccaacacg cgctgcgctg aaagtgtcat tctttggtcc tttctatggc
     7021 ggttataacg tcattgcact tgatcgggaa taccgccatg cgctggtttg cggcccggga
     7081 agggtttgat gtcagtaagt ttatttgggt acagcagccc ggtagttagt gagtgctgag
     7141 tttcagacca ataatcccca atacgattaa cgccagactc gccaggcgca tcgggttagc
     7201 ggactcaccg agcagcacaa tgccggtgat agccgcgccg actgcgccaa tacccgtcca
     7261 cacggcataa gccgtcccta ctggtaacga tttcatcgcc caggcaagta gcgccatact
     7321 gacaatcatc gccgtcacgg taataacact cggcgtcaaa cgactaaagc cgtgggtata
     7381 tttcaggcca acggcccata ccacttccag cagaccagca ataactaaga taatccagga
     7441 catatcaggc tccggagaat tggggccgtc cccggtgaaa agacgcgttt gcaggtcgtc
     7501 ctgcaaagct gatggttgaa cggatatttt gccaggtggc aggggaattt caactattac
     7561 cttagtgact atcgcagaaa aaacaaacgg cacgacacag ctgtcgtacc gttattgctt
     7621 attgctattg ctgcgctttc gttgctgcgc cagaaatcgc gttaccgcca tcagaaatgt
     7681 cttcaccaac gccacgcgtg gtgttgcagg cagttaatac tgttgaaagc accagaacag
     7741 aaaagatcgc tgcaattgtc ttcttcacca taacgtcttc cttttaggta atgttattta
     7801 tgtttgccta tagcaaatta ataatagaca acatcgccaa aaatgacgga aatctgatga
     7861 tttttcggaa gagaagaaaa attagctggc agcgcgagag atggagttgc cgagatgttt
     7921 gatgtcttcg ccgaaaccgc gagcggtgtt acagcccgtg agcagcgtac tggcaagcaa
     7981 aacaagaacg ataaggcgtt tcatcatctc tgacctgaat aagtgatggt gcagcctgca
     8041 ggccgcacca caaccgcatt acttcacgcg agagacgtat tcaccagagc gggtatccac
     8101 tttgatgact tcgccgattt gtacgaacag cggaacctta accacagcgc cagtagacag
     8161 ggtagccggt ttgccgccag tacctgcggt atcacctttc aggcccggat cggtatcaac
     8221 gatttccagt tcaacgaagt tcggcggagt aacggagatc ggctgaccat tccacagagt
     8281 tacgatacac tctgcctgat ccagcagcca tttagcgtta tcgccaattg cttttgcatc
     8341 agcagacagc tgctcgaaag tttcgttgtt catgaagtgc cagaactcac cgtcgttgta
     8401 caggtaagtc aggttcatat cgacaacatc agcgccttca gcggaatcag tagatttgaa
     8461 ggttttttct acgcgagtac cggtcagcag acgacgcagt ttaacgcgag caaatgcctg
     8521 gcctttaccc ggttttacga attcactcgc ttcaaccgcg taaggttcgc cgtctaacat
     8581 gattttaaga ccagcacgaa aatcgttgct atagtacgtt gccataaggc cctctgaaat
     8641 ttgttaattg gtagctaagc cacaaaatgg cgcatattgt aaccctaaat accccatcca
     8701 gagaagattg gttaacgcaa cttgccgatg ttgtgaccga tcctgatgaa cttctgcgtc
     8761 ttttgaatat agacgcggac gaaaaactgt tggccggacg cagcgccaaa aagctgtttg
     8821 ccctgcgtgt gccccgctca tttatcgatc gcatggagaa aggcaatccg gacgatcctc
     8881 ttttgcgtca ggtacttacc tcgcaagatg agtttgtcgt cgcgtccgga ttctccaccg
     8941 acccactgga agaacagcac agcgtagtgc ctggtttgtt gcataaatac cacaaccggg
     9001 cgcttttgct ggtcaaaggc ggctgcgcgg taaattgccg ctattgcttc cgtcgccact
     9061 tcccctatgc cgaaaatcag ggcaacaagc gtaactggca gactgcactt gagtatgttg
     9121 ctgcgcatcc ggaactggac gagatgattt tctccggcgg cgatccgctg atggcgaaag
     9181 atcacgagct ggactggttg ctcacacaac tggaagccat cccgcatatc aaacgtctgc
     9241 ggattcacag ccgtctgccg attgtgatcc cggcacgcat cacagatgcg ctggttgaac
     9301 gcttttcaca ttctacgctg caaatcctgc tggtgaatca catcaaccat gccaatgaga
     9361 tagatgaaac attccgtcag gcgatggcta agttgcgccg ggtaggcgtt actttgctga
     9421 accagagcgt tctgttacgt gatgtgaacg ataacgcaca aacgctggca aacctgagta
     9481 atgcgttgtt cgatgccggc gtgatgccgt attacctgca tgtgctcgat aaagtacagg
     9541 gcgcagcgca ttttatggtg agtgatgacg aagcacggca gattatgcgt gagttgctga
     9601 cattggtgtc gggatatctg gtgccgaaac tggcgcgaga aattggcggc gaacccagca
     9661 aaacgccgct ggatctccag ctacgccagc agttactgat taaacaggga agttaaacat
     9721 taaaattgcc tgatgcgcta cgcttatcag gcctacatcg tgcattgaaa ttgaatggat
     9781 ttgcaatgaa ctgtaggccg gataaggcgt ttacgccgca tccggcaaga gcaacaaacg
     9841 caagtacagc aacctgtcat taaactgaga aatttaatct ttgcccgttg cataaccttt
     9901 aattattcat atgcattgct gttgttactt tttatatagc taacaccaat aattaacctt
     9961 tcttttctgt ttatatagag tgagcacggc tatttatgtt attttaacaa ctattactac
    10021 caagcccatt tatctggctt ataaattaaa attaattatt taattgagaa atggttaggg
    10081 agaacctaca tggccataag catcaagggt gttaataccg gtgttattcg caagagtaat
    10141 aatttcattg cactggcgct gaaaattaaa gaacctcgca ataaagaatc gttgttcttt
    10201 atgtctgtca tggaactgcg cgacctgctg attgcgctgg aaagtcgtct gcatcaaaag
    10261 cataaactgg atgctgctgc acgccttcag tatgagcaag ctcgcgataa agtcattaag
    10321 aaaatggcag aaaacatccc agaaattctg gttgatgagc ttaaaaatgc cgatattaat
    10381 cgtcgggtta acacgctgga acttaccgat aatcaaggcg aaaatcttac cttcgtatta
    10441 acgctacatg acggtagcaa atgtgagtta gtcgtcaatg agttgcagat tgaaatgcta
    10501 gcgcgagcaa tcattcatgc aattaataat gcggaaatgc gtgaactggc attacgtatt
    10561 acctcactgt tagatttcct gccgttatat gacgttgact gccaggaaaa tggcagtctg
    10621 gaatatgaca cctattccca accggaatgg aaacataact tgttcgacca ttatctggcg
    10681 gtgctttacc gctttaaaga tgaaagtggc aaagaacaat ttagcggcgc agtggtgaaa
    10741 acgcgtgaag caacgccgag taaagaagta gaggcgatca ctcgccgaat gcttgatttc
    10801 agcccacgac tgaaaaaact cgcgggtgtg ccatgtcagg tctatgttcg caccgtagcg
    10861 gcgaataacg cccaaccgct aacccaggat caatgcttac gcgcgctgca tcacttacgt
    10921 gttcaatcca ccagcaaaac tgcaccacag gcgaaataat ctcatctttg ctaatgcgag
    10981 gctggagcca tccagcctga aatgactgat aacgtgatcg ttggtcatgc cggatgcggc
    11041 gtaaacgcct tatccggcct acaaattctc aagcattcaa tcagttgcaa tgcctgctgt
    11101 aggcctgata agcgaagcgc atcaggcaat aatacgtttg tcacccagcc tctggatcac
    11161 atcagttcgg gcacttataa acctgaccga taatctggct atccgtcggg acaaaactgg
    11221 acaacattcc ctgcgacggg ctgctgatgc cataaatcac gttaccgccc attgcagccg
    11281 cctggttgcg cagatcgttt gctgcgccgc gcatagaacc gccctcttct ccgtgttgcc
    11341 cggaaagcca gttgctttgc ttacctgtcg cagtaccaat cagctggcac tctgcgcctg
    11401 gctgctcgtc cacaatgcgt acactctgac cggcagcact caattcgttg ctggagctac
    11461 aacccgccat cagtagcgcg gcaccgacaa tccctgctaa gtattttacg tgcatgttat
    11521 tccccataat caatgagctg gacgccactc gcgtcgtccg tgtctgaatc ttatactaga
    11581 aagatgacca aaagaaaaac ccccagacat ttctgcccgg gggtttgttt atttctgcga
    11641 ggtgcagggc aattacatca tgccgcccat gccacccatg ccgccagcag cgcctaagtc
    11701 agctgcatcg tttttcggca ggtcggtaac catgcactcg gtggtgatca tcaggccagc
    11761 cacagaagcc gcgtactgca gagcagaacg ggttactttg gttggatcca agatacccat
    11821 gtcgatcatg ttgccgtatt cttcggttgc tgcgttgtaa ccgtagttgc cgtcgccgcc
    11881 tttaacagtg ttagcaacaa cagacggttc ttcgccgcag ttcaatacga tctgacgcag
    11941 cggagcttcc attgcacgca gtgcaacttt gatacccacg ttctggtctt cgttctgacc
    12001 acgcaggtca gccagtttag acgctacgcg gatcagcgca acaccaccac cagcaaccac
    12061 gccttcttct accgcagcac gggtcgcgtg cagggcatct tcaacgcgtg cttttttctc
    12121 tttcatttca acttcggtag cagcacctac tttgataact gcaacgccgc ctgccagttt
    12181 cgctacgcgc tcctgcagtt tttcacggtc gtagtcagaa gttgcttctt caatctgctg
    12241 acggatctga gcaacacggc cctggattgc agcttcttca cccacgccat caatgatggt
    12301 ggtggtgtct ttgttgatca caacacgttt agcctgaccc aggtcttcca gggttgcttt
    12361 ttccagctcc ataccgatct cttcagagat tacggtaccg ccagtcaggg ttgcgatatc
    12421 ctgcagcata gctttacggc gatcgccgaa gcccggagct ttaaccgcag caactttcac
    12481 gatgccacgc atggtgttaa caaccagagt tgccagcgct tcgccttcaa catcttcagc
    12541 gatgatcagc agcggtttac ctgctttagc aacggcttcc agaaccggca gcatttcgcg
    12601 gatgttggag attttcttgt cagccagcag gatgaacggg ctttccagtt ctactgcgcc
    12661 agtttccggc ttgttgatga agtaaggaga caggtagcca cggtcgaact gcataccttc
    12721 aaccacgtcc agttcgtcct gcagaccggt accgtcttca acggtgataa cgccttcttt
    12781 accgactttg tccatcgctt cagcgatcag tttacctacg gtttcgtcgg agttagcgga
    12841 gatggtacca acctgagcaa tcgctttaga gtcagagcat ggtacggaca gcgctttcag
    12901 ttcttcaact gcagcggtaa cagctttgtc gataccacgt ttcaggtcca tcgggttcat
    12961 gcccgcagca actgctttca gaccctcagt gatgatagcc tgagccagta cggttgcagt
    13021 ggtggtaccg tcgcctgcag cgtcgttcgc tttagaggca acttctttca ccatctgcgc
    13081 acccatattt tcgaacttgt cttccagttc gatttcacga gcaacggaaa caccatcttt
    13141 ggtgatggtc ggtgcaccga aagatttatc cagaactacg ttacggcctt tcggaccgag
    13201 ggtaactttc actgcatctg ccagtacgtt tacgccgcgc agcattttca cacgagcgtc
    13261 gttaccgaat tttacgtctt tagctgccat tatctttatt ccttaaattc gtatgttcag
    13321 tgtcgtgcga ggattacgct tcaacaattg ccagaatgtc gctttcggac atgatcaaca
    13381 cttcttcatt gtcgatcttc tcagatttca caccgtagcc atcgttgaaa ataacgatgt
    13441 cgccaacttt cacatccagc ggcttcactt cgccattttc aaggatacgg ccattgccga
    13501 cagccagcac ttcgccgcgg gtggatttag ccgctgcaga gccggtcaga acgatgccgc
    13561 cagcagattt agtttcaact tctttacgct tgacgatcac gcgatcatgc aatggacgaa
    13621 tattcattga taactctcct ttgagaaagt ccgtatctgt tatgggtgac gccggagctt
    13681 acgtggtttc ccggctggtg accagagaaa tggggatgag gattcgcccc ttcaaggggg
    13741 aaaaagaaaa aaaattctga tcagcacaaa atcgggtgaa aaccctgatt cacctcacat
    13801 ttcatcgcaa tttcttcatc gccgtcataa gcgaatctga ttgtgctacc atcgaaaatc
    13861 tacgcagttg cccaaaattt gggcgcaatc ggatatcaac ccatgagtgg actcaaacaa
    13921 gaactggggc tggcccaggg cattggcctg ctatcgacgt cattattagg caccggcgtg
    13981 tttgccgttc ctgcgttagc tgcacaggta gcaggcaata acagcctgtg ggcgtggccc
    14041 gttttgatta tcttagtgtt cccgattgcg attgtgtttg cgattctggg tcgccactat
    14101 ccctgcgcag gcggtgtcgc gcacttcgtc ggtatggcgt ttggttcgcg gcttgagcga
    14161 gtcaccggct ggttgttttt atcggtcatt cccgtgggtt tgccagccgc gctacaaatt
    14221 gccgccgggt tcggccaggc aatgtttggc tggcatagct ggcaactgtt gttggcagaa
    14281 ctcggtacgc tggcgctggt gtggtatatc ggtactcgca gtgccagttc cagtgctaat
    14341 ctacaaaccg ttattgccgg acttatcgtc gcgctgattg tcgctatctg gtgggcgggc
    14401 gatatcaaac ctgcgaatat ccccttcccg gcacctggta atatcgaact taccgggtta
    14461 tttgctgcgt tatcagtgat gttctggtgt tttgtcggtc tggaagcatt tgcccatctt
    14521 gcctcggaat ttaaaaatcc agagcgtgat tttcctcgcg cattgatgat tggtctgctg
    14581 ctggcaggat tagtctactg gggctgtacg gtagtcgtct tacacttcga cgcctatggt
    14641 gaaaaaatgg cggcggcagc atcgcttcca aaaattgtag tgcaactgtt cggtgtagga
    14701 gcgttatgga ttgcctgcgt gattggctat ctggcctgct ttgccagtct caacatttat
    14761 atacagagct tcgcccgcct ggtctggtcg caggcgcaac ataatcctga ccactacctg
    14821 gcacgcctct cttctcgcca tatcccgaat aatgccctca atgcggtgct cggctgctgt
    14881 gtggtgagca ctttggtgat tcatgcttta gagatcaatc tggacgctct tattatttat
    14941 gccaatggca tctttattat gatttatctg ttatgcatgc tggcaggctg taaattattg
    15001 caaggacgtt atcgactact ggcggtggtt ggcgggctgt tatgcgttct gttactggca
    15061 atggtcggct ggaaaagtct ctatgcgctg atcgtgctgg cggggttatg gctgttgctg
    15121 ccaaaacgaa aaacgccgga aaatggcata atcacataat ccggcgtttc gacattaatc
    15181 ctggcgatcg tctttatgat caaggcggtc gcgctcatca tcctttcgct ggtactcacc
    15241 atcaaaagta ttaccgccac cggtcccggc gctaaaaccg ccgcctggca tacgagaaaa
    15301 gcgcaaatgc ggcatcaact tcactgtcag atgcttttgc accggcggta ataaaagcag
    15361 aagaccgagg aagtcggtga aaaagcccgg taataaaagc agcaaaccgg caatgatcag
    15421 cgaaacactt ttaatcatct ccgccgctgg gttttcaccc gccgccattt tttgctgcat
    15481 cagcacgaaa ttcttaaagc cctggttacg taccagtgac atcccgataa ctgacgtgaa
    15541 tataaccagc acgagggtca gcaatacccc caatacatgg gcaacctgaa taaagattga
    15601 aatctcaata tagacataaa ggaaaatggc aataaaaggt aaccagcgca aaggtttctc
    15661 ctgtaatagc agccggtaaa acccggctac ctgaatgggt tgcgaatcgc gttcagctta
    15721 tattgtggtc attagcaaaa tttcaagatg tttgcgcaac tatttttggt agtaatccca
    15781 aagcggtgat ctatttcaca aattaataat taaggggtaa aaaccgacac ttaaagtgat
    15841 ccagattacg gtagaaatcc tcaagcagca tatgatctcg ggtattcggt cgatgcaggg
    15901 gataatcgtc ggtcgaaaaa cattcgaaac cacatatatt ctgtgtgttt aaagcaaatc
    15961 attggcagct tgaaaaagaa ggttcacatg tcaaacaaca ttcgtatcga agaagatctg
    16021 ttgggtacca gggaagttcc agctgatgcc tactatggtg ttcacactct gagagcgatt
    16081 gaaaacttct atatcagcaa caacaaaatc agtgatattc ctgaatttgt tcgcggtatg
    16141 gtaatggtta aaaaagccgc agctatggca aacaaagagc tgcaaaccat tcctaaaagt
    16201 gtagcgaatg ccatcattgc cgcatgtgat gaagtcctga acaacggaaa atgcatggat
    16261 cagttcccgg tagacgtcta ccagggcggc gcaggtactt ccgtaaacat gaacaccaac
    16321 gaagtgctgg ccaatatcgg tctggaactg atgggtcacc agaaaggtga atatcagtac
    16381 ctgaacccga acgaccatgt taacaaatgt cagtccacta acgacgccta cccgaccggt
    16441 ttccgtatcg cagtttactc ttccctgatt aagctggtag atgcgattaa ccaactgcgt
    16501 gaaggctttg aacgtaaagc tgtcgaattc caggacatcc tgaaaatggg tcgtacccag
    16561 ctgcaggacg cagtaccgat gaccctcggt caggaattcc gcgctttcag catcctgctg
    16621 aaagaagaag tgaaaaatat ccaacgtacc gctgaactgc tgctggaagt taaccttggc
    16681 gcaacagcaa tcggtactgg tctgaacacg ccgaaagagt actctccgct ggcagtgaaa
    16741 aaactggctg aagtcactgg cttcccatgc gtaccggctg aagacctgat cgaagcgacc
    16801 tctgactgcg gcgcttatgt tatggttcac ggcgcgctga aacgcctggc tgtgaagatg
    16861 tccaaaatct gtaacgacct gcgcttgctc tcttctggcc cacgtgccgg cctgaacgag
    16921 atcaacctgc cggaactgca ggcgggctct tccatcatgc cagctaaagt aaacccggtt
    16981 gttccggaag tggttaacca ggtatgcttc aaagtcatcg gtaacgacac cactgttacc
    17041 atggcagcag aagcaggtca gctgcagttg aacgttatgg agccggtcat tggccaggcc
    17101 atgttcgaat ccgttcacat tctgaccaac gcttgctaca acctgctgga aaaatgcatt
    17161 aacggcatca ctgctaacaa agaagtgtgc gaaggttacg tttacaactc tatcggtatc
    17221 gttacttacc tgaacccgtt catcggtcac cacaacggtg acatcgtggg taaaatctgt
    17281 gccgaaaccg gtaagagtgt acgtgaagtc gttctggaac gcggtctgtt gactgaagcg
    17341 gaacttgacg atattttctc cgtacagaat ctgatgcacc cggcttacaa agcaaaacgc
    17401 tatactgatg aaagcgaaca gtaatcgtac agggtagtac aaataaagaa ggcacgtcag
    17461 atgacgtgcc ttttttcttg tgaacagtaa cttaaaaaca acaatctaat atcaacttgt
    17521 taaaaaacaa ggaaggctaa tatgctagtt gtagaactca tcatagtttt gctggcgatc
    17581 ttcttgggcg ccagattggg gggaataggt attggttttg caggcggatt gggggtgctg
    17641 gttcttgccg ctattggcgt taaacccggt aacatcccgt tcgatgtcat ttccattatc
    17701 atggcggtta tcgccgctat ttctgccatg caggttgctg gcggtctgga ctatctggtt
    17761 catcagacag aaaagctgct gcgccgtaac ccgaaataca tcacgatcct cgcacctatc
    17821 gtgacctatt tcctgacaat ctttgctggt actggcaaca tctctctggc gacactgcca
    17881 gttatcgctg aagttgcgaa ggaacaaggc gttaaacctt gccgtccgct ctctactgca
    17941 gtggtatccg cgcagattgc gatcaccgca tcgccaatct cagcggcagt ggtttacatg
    18001 tcttccgtga tggaaggtca tggcatcagc tacctccatc tgctctccgt ggtcatcccg
    18061 tccaccctgc tggcggttct ggtgatgtcc tttctggtca ctatgctgtt caactccaaa
    18121 ctctctgacg atccgattta tcgcaagcgt ctggaagagg gcctggttga actgcgcggt
    18181 gaaaagcaga ttgaaatcaa atccggtgca aaaacgtccg tctggctgtt cctgctgggc
    18241 gtagttggcg tggttatcta tgcaatcatc aacagcccaa gcatgggtct ggttgaaaaa
    18301 ccgctgatga acaccaccaa cgcaatcctg atcatcatgc tcagcgttgc aactctgacc
    18361 accgttatct gtaaagtcga taccgacaac atcctcaact ccagcacctt caaagcaggt
    18421 atgagcgcct gtatttgtat cctgggtgtt gcgtggctgg gcgatacttt cgtttccaac
    18481 aacatcgact ggatcaaaga taccgctggt gaagtgattc agggtcatcc gtggctgctg
    18541 gccgtcatct tcttctttgc ttctgctctg ctgtactctc aggctgcaac cgcaaaagca
    18601 ctgatgccga tggctctggc actgaacgtt tcaccgctga ccgctgttgc ttctttcgct
    18661 gcggtgtctg gtctgttcat tctgccgacc tacccgacgc tggttgctgc ggtacagatg
    18721 gatgacacgg gtactacccg tatcggtaaa ttcgtcttca accatccgtt cttcatcccg
    18781 ggtactctgg gtgttgccct ggccgtttgc ttcggcttcg tgctgggtag cttcatgctg
    18841 taatgatcaa tcgcggggcg ttcacgcccc gctttctttc ccgccgacta acatccttcc
    18901 cccgtacgtt gtatagtgac ctctctcttg cggttccatc tgttcttgcg aggtgtttat
    18961 gcttgatgaa aaaagttcga ataccgcgtc tgtcgtggtg ctatgtacgg caccagatga
    19021 agcgacagcc caggatttag ctgccaaagt gctggcggaa aaactggcgg cctgcgcgac
    19081 cttgatcccc ggcgctacct ctctctatta ctgggaaggt aagctggagc aagaatacga
    19141 agtgcagatg attttaaaaa ctaccgtatc tcaccagcag gcactgctgg aatgcctgaa
    19201 gtctcatcat ccatatcaaa ccccggaact tctggtttta cctgttacac acggagacac
    19261 agattacctc tcatggctca acgcatcttt acgctgatcc tgctactttg cagcacttcc
    19321 gtttttgccg gattattcga cgcgccggga cgttcacaat ttgtccccgc ggatcaagcc
    19381 tttacttttg attttcagca aaaccaacat gaccttaatc tgacctggca gatcaaagac
    19441 ggttactacc tctaccgtaa acagatccgc attacgccgg aacacgcgaa aattgccgac
    19501 gtgcagctgc cgcaaggcgt ctggcatgaa gatgagtttt acggcaaaag cgagatttac
    19561 cgcgatcggc tgacgcttcc cgtaaccatc aaccaggcga gtgcgggagc gacgttaact
    19621 gtcacctacc agggctgtgc tgatgccggt ttctgttatc cgccagaaac caaaaccgtt
    19681 ccgttaagcg aagtggtcgc caacaacgca gcgtcacagc ctgtgtctgt ttcgcagcaa
    19741 gagcagcaca ccgcgcaatt gcccttttcc gcgctctggg cgttgttgat cggtattggt
    19801 atcgccttta cgccatgcgt gctgccaatg tacccactga tttctggcat cgtgctgggt
    19861 ggtaaacagc ggctctccac tgccagagca ttgttgctga cctttattta tgtgcagggg
    19921 atggcactga cttacacggc gctgggtctg gtagttgccg ccgcagggtt acagttccag
    19981 gcggcgctac agcacccata cgtgctcatt ggcctcgcca tcgtctttac cttgctggcg
    20041 atgtcaatgt ttggcttgtt tactctacaa ctcccctctt cgctgcaaac acgtctcacg
    20101 ttgatgagca atcgccaaca gggcggctca cctggcggtg tgtttgttat gggggcgatt
    20161 gccggactta tctgttcacc atgcaccacc gcaccgctta gcgcgattct gctgtatatc
    20221 gcccaaagcg ggaacatgtg gctgggcggc ggcacgcttt atctctatgc gttgggcatg
    20281 ggcctgccgc tgatgctaat taccgtcttt ggtaaccgct tgctgccgaa aagcggcccg
    20341 tggatggaac aagtcaaaac cgcgtttggt tttgtgatcc tcgcactgcc ggtcttcctg
    20401 ctggagcgag tgattggtga tgtatgggga ttacgcttgt ggtcggcgct gggtgtcgca
    20461 ttctttggct gggcctttat caccagccta caggctaaac gcggctggat gcgcgtggtg
    20521 caaataatcc tgctggcagc ggcattggtt agcgtgcgcc cacttcagga ttgggcattt
    20581 ggtgcgacgc ataccgcgca aactcagacg catctcaact ttacacaaat caaaacggta
    20641 gatgagttaa atcatgcgct cgttgaagcc aaaggcaaac cggtgatgtt agatctttat
    20701 gccgactggt gcgtcgcctg taaagagttt gagaaataca ccttcagcga cccgcaggtg
    20761 caaaaagcgt tagcagacac ggtcttactt caggccaaca tcacggccaa cgacgcacaa
    20821 gatgtggcgc tgttaaagca tcttaatgtc cttggcctac cgacaattct cttttttgac
    20881 ggacaaggcc aggagcatcc acaagcacgc gtcacgggct ttatggatgc tgaaaccttc
    20941 agcgcacatt tgcgcgatcg ccaaccgtga acgacacttg cagcgggaaa gacggaggaa
    21001 aatagcgtgc aacgtgaaga tgtactggga gaagccctga aattattaga attacaaggg
    21061 attgccaaca ccacgctgga gatggttgct gaacgtgtgg attatccact ggacgagcta
    21121 cgccgcttct ggccagacaa agaggcaatc ctctacgatg cgctgcgtta tcttagccaa
    21181 cagatagatg tctggcgtcg tcagctgatg ctggacgaaa cgcaaaccgc cgaacaaaag
    21241 cagctggcac gttatcaggc gttatcggag tgcgttaaaa acaaccgcta tccgggctgt
    21301 ctatttatcg ctgcctgtac gttttatccc gatcctggcc accctattca tcaactggcc
    21361 gatcagcaaa aaagcgcggc ctacgatttc acccacgaac tgttaaccac actggaagtt
    21421 gacgatccgg cgatggtagc aaagcagatg gaactggtgc tggaaggctg tttaagccga
    21481 atgctggtga atcgtagcca ggcggatgtc gacactgcac atcggctggc ggaagatatc
    21541 ctgcgcttcg cccgctgccg ccagggtggt gcattgacct gacagaaaca cagaaaagaa
    21601 gcgatttgcc gcaatcttaa gcagttgaat cgcttttact gaaattaggt tgacgagatg
    21661 tgcagattac ggtttaatgc gccccgttgc ccggatagct cagtcggtag agcaggggat
    21721 tgaaaatccc cgtgtccttg gttcgattcc gagtccgggc accaaattca tatcaacgga
    21781 cctctacgga ggttcgtttt tcgtttcaga acgccacgat ttaagcgttc tgcctacaaa
    21841 tcaattctac cgaactcaac cagattcccc ccacatcaac cccattgtgt gggtataatt
    21901 gcgggcatac cccagttcga cagaatttgt accctcttta acgcattcag aaggctgaac
    21961 tatggcactg actgacgcaa aaatccgggc tgcaaagccc actgacaagg cttataaact
    22021 cactgacggg actggcatgt tcctgctggt acatcctaat ggctcccgtt actggcgtct
    22081 ccgttatcgt attctgggta aggagaagac tctggcactt ggtgtgtatc cagaagtttc
    22141 tctctccgaa gctcgtacaa aacgggatga ggcccgaaaa ctgatttcgg agggggttga
    22201 cccttgcgaa cagaaaagag ctaaaaaagt agtccctgat ttacagctct cttttgaaca
    22261 tattgcgcga cgctggcatg ccagtaataa acaatgggca caatcacaca gcgataaagt
    22321 actcaaaagc ctcgagactc acgttttccc ctttatcggc aaccgggata tcacaacact
    22381 caataccccg gatctgctta tccctgttcg tgctgcagaa gctaaacaaa tttatgaaat
    22441 cgccagtcgt ctgcagcaaa gaatatctgc cgtaatgcgt tatgccgtac agtctggcat
    22501 catcagatat aatcctgctc tggatatggc tggcgcattg actacggtaa aacgccagca
    22561 tcgccccgct cttgatcttt ctcgcctgcc tgaacttttg tcgcgtattg gcagttacaa
    22621 agggcaaact gtcacccagc ttgccgttat gctgaattta ctggttttta ttcgttccag
    22681 tgaactcaga tacgcccgct ggtctgaaat tgatattgac aatgccatgt ggactattcc
    22741 agccgaacgc gaacccctgc caggcgtaaa attctcacac cggggctcca agatgcgaac
    22801 accacatctt gtgccactca gcaaacaggc tgtagccata ctgacagaac tacagacatg
    22861 ggctggtgaa aatggtctga tctttacggg agcacatgac ccgcgtaaac caatcagtga
    22921 aaatgtaatg aacgcatctc acacaattaa acacggagca gtatgatggt taaaagggtg
    22981 aaactggcag gtgtggagcc tcgcagattt ccggcatcat agtgcccaat acgggatgca
    23041 taaagctccc tcagactgga gactccacaa atgaaatata caccggttgg cgttgatatc
    23101 gcaaaacatg tcattcagat tcacttcatc aatgagcaca cag
//
LOCUS       DADMIB010000056        22930 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.056, whole genome shotgun sequence.
ACCESSION   DADMIB010000056 DADMIB010000000
VERSION     DADMIB010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22930
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.056"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..745)
                     /locus_tag="JNZ89_002031"
     CDS             complement(<1..745)
                     /locus_tag="JNZ89_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8935920.1"
                     /translation="MAMSEQTQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI
                     LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS
                     GLVLLALAGSVGAVLLAAALVGTSSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG
                     SSLGPLLTAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIIN
                     PLPRNKVVLAVSILLILIFSKYFYMASISS"
     gene            963..2615
                     /locus_tag="JNZ89_002032"
     CDS             963..2615
                     /locus_tag="JNZ89_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HAY8935921.1"
                     /translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG
                     HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR
                     GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR
                     QDLKIAVIGLTTDDTAKIGNPEYFTDVEFRKPADEAKLVIQELQQTEKPDIIIAATHM
                     GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQAPVCMAAENKKQVDYVPGTPCK
                     PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL
                     YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA
                     QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV
                     AQMKPDSGAYPQFANVSFVTKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR
                     LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ"
     gene            complement(2652..3131)
                     /gene="ybaK"
                     /locus_tag="JNZ89_002033"
     CDS             complement(2652..3131)
                     /gene="ybaK"
                     /locus_tag="JNZ89_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK"
                     /protein_id="HAY8935922.1"
                     /translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV
                     YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMAAQRSTGYLVGG
                     ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD"
     gene            complement(3335..4129)
                     /locus_tag="JNZ89_002034"
     CDS             complement(3335..4129)
                     /locus_tag="JNZ89_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935923.1"
                     /translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGS
                     HDMTPLPTRLLKKLKNADALIVEADVSTSDTPFANLPTCEALEERINEEQLQNLQHIS
                     QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG
                     AENQITMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQ
                     SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR"
     gene            4267..4608
                     /locus_tag="JNZ89_002035"
     CDS             4267..4608
                     /locus_tag="JNZ89_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HAY8935924.1"
                     /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSTL
                     INNNRKLTTEMAFRLAKVFDTTVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
                     ARREERAKKVA"
     gene            complement(4823..7327)
                     /gene="copA"
                     /locus_tag="JNZ89_002036"
     CDS             complement(4823..7327)
                     /gene="copA"
                     /locus_tag="JNZ89_002036"
                     /EC_number="7.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-exporting P-type ATPase CopA"
                     /protein_id="HAY8935925.1"
                     /translation="MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT
                     GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ
                     LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG
                     AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL
                     WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPLW
                     FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTAEGEK
                     SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGESVHAGT
                     VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALI
                     SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA
                     DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR
                     AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNPALLNDQQVDTKAIEADISA
                     QASQGATPVLLAIDGKVVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA
                     IAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG
                     SDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWP
                     FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE"
     gene            7589..8521
                     /gene="glsA"
                     /locus_tag="JNZ89_002037"
     CDS             7589..8521
                     /gene="glsA"
                     /locus_tag="JNZ89_002037"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HAY8935926.1"
                     /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAVVA
                     IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
                     ALELHGGKPLSPLVNAGAIATTSLINAENIEQRWQRILHIQQQLAGEQVALSDEVNQS
                     EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLINTVELATLGATLAAGGLN
                     PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI
                     AAFSPPLDEEGNSVRGQKMVASVAKQLGYNVFKG"
     gene            8524..9816
                     /locus_tag="JNZ89_002038"
     CDS             8524..9816
                     /locus_tag="JNZ89_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8935927.1"
                     /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA
                     STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL
                     AVSIAMVAHAFGAYAVQFLHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVIL
                     VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK
                     VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV
                     GYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV
                     LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI
                     VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV"
     gene            9941..10348
                     /locus_tag="JNZ89_002039"
     CDS             9941..10348
                     /locus_tag="JNZ89_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CueR"
                     /protein_id="HAY8935928.1"
                     /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL
                     NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR
                     DQLLALANACPGDDSADCPIIENLSGCCHHRAG"
     gene            complement(10349..10807)
                     /locus_tag="JNZ89_002040"
     CDS             complement(10349..10807)
                     /locus_tag="JNZ89_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HAY8935929.1"
                     /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL
                     VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV
                     LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS"
     gene            complement(10804..11721)
                     /locus_tag="JNZ89_002041"
     CDS             complement(10804..11721)
                     /locus_tag="JNZ89_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HAY8935930.1"
                     /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
                     LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
                     NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR
                     DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA
                     FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM
                     MPLEASSLMGSIAGIAELVKDSANKRTQP"
     gene            11867..12544
                     /gene="fetA"
                     /locus_tag="JNZ89_002042"
     CDS             11867..12544
                     /gene="fetA"
                     /locus_tag="JNZ89_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein FetA"
                     /protein_id="HAY8935931.1"
                     /translation="MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGC
                     GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI
                     FPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL
                     LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ
                     EARYELA"
     gene            12531..13310
                     /gene="fetB"
                     /locus_tag="JNZ89_002043"
     CDS             12531..13310
                     /gene="fetB"
                     /locus_tag="JNZ89_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HAY8935932.1"
                     /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAI
                     IQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG
                     AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL
                     SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
                     IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK"
     gene            complement(13373..14227)
                     /gene="cnoX"
                     /locus_tag="JNZ89_002044"
     CDS             complement(13373..14227)
                     /gene="cnoX"
                     /locus_tag="JNZ89_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperedoxin"
                     /protein_id="HAY8935933.1"
                     /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPI
                     LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI
                     RALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
                     LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAAL
                     ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR
                     RQLYALLY"
     gene            complement(14288..15097)
                     /gene="ybbO"
                     /locus_tag="JNZ89_002045"
     CDS             complement(14288..15097)
                     /gene="ybbO"
                     /locus_tag="JNZ89_002045"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HAY8935934.1"
                     /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA
                     GCRKPDDVERMNNMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGP
                     LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
                     ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF
                     TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG"
     gene            complement(15087..15710)
                     /gene="tesA"
                     /locus_tag="JNZ89_002046"
     CDS             complement(15087..15710)
                     /gene="tesA"
                     /locus_tag="JNZ89_002046"
                     /EC_number="3.1.1.5"
                     /EC_number="3.1.2.14"
                     /EC_number="3.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional acyl-CoA thioesterase I/protease
                     I/lysophospholipase L1"
                     /protein_id="HAY8935935.1"
                     /translation="MNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSA
                     SAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLR
                     GFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVP
                     LLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS"
     gene            15681..16367
                     /locus_tag="JNZ89_002047"
     CDS             15681..16367
                     /locus_tag="JNZ89_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8935936.1"
                     /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE
                     SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT
                     LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
                     FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR
                     LVNGQLQEEA"
     gene            16364..18375
                     /locus_tag="JNZ89_002048"
                     /pseudo
     CDS             16364..18375
                     /locus_tag="JNZ89_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000561880.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            18376..18774
                     /locus_tag="JNZ89_002049"
     CDS             18376..18774
                     /locus_tag="JNZ89_002049"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HAY8935937.1"
                     /translation="MLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRT
                     LGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLP
                     CSGALLLSLFGGWLGARLVKGKALFRQFAG"
     gene            19203..22930
                     /locus_tag="JNZ89_002050"
                     /pseudo
     CDS             19203..22930
                     /locus_tag="JNZ89_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308587.2"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
BASE COUNT         5290 a         6005 c         6480 g         5155 t
ORIGIN      
        1 agctgctgat gctcgccata tagaaatatt tcgagaaaat gaggattaac agaatgctga
       61 ctgccagtac cactttgttg cgcggcagtg gattgattat cgtcgctttg ggttttcctt
      121 tattcattcg gtgctgtgcc gagtaccaac ggctaatttg cgccaacacc acgatcgcca
      181 gcagtgccgc aagcacaaac caggcaacgt tgcctttgcc ataaggcgcg ataatcaccg
      241 ccgtcagcaa gggtcccagg gaactgccaa agttgccgcc gacctgaaag atagattgcg
      301 ccaggccatg ccgcccgccg gaagccatac gggctacgcg agaagattcc ggatgaaaga
      361 ccgatgaact ggtaccgacc agcgccgccg ccagcagaac tgcgccaaca ctgcccgcca
      421 gcgcaagcag caccagacca cttaaggtaa agcacatgcc aattggcaac gaccacggca
      481 tcggatattt atcggtccag tagccgacca ctggttgcag tagcgaagag gcgagctgga
      541 aggtgagggt tatcatgcca atctgcataa atgtcagaga aaattctgac tgaagcagag
      601 gataaatcgc cagaatcagc gattggatca tgtcgttcag cagatgtgag aggctgatag
      661 cacctaaaat accaaacgat gttcgggcct tggtcgttga cgcagccgcg cccgccacag
      721 gctgggtttg ttcactcatt gccataggaa agtcactttt tcagggttgc gatgtaaaga
      781 atgatcttat ttgtgattat tacccgacta acatacctgt aagcgtcgcc tgaaggaagt
      841 ctcaacgccg aatacagaat ttctaatctg gatgcagatt tatcttcacc ggacgcagac
      901 ttgtctatta tgttgcgtca tactattttt caacacgttg aaatcaggtc agggagagaa
      961 gtatgaaatt attgcagcgg ggcgtggcgt tagcgctgtt aaccacattt acactggcga
     1021 gtgaaactgc tctggcgtat gagcaggata aaacctacaa aattacagtt ctgcatacca
     1081 atgatcatca tgggcatttt tggcgcaatg aatatggcga atatggtctg gcggcgcaaa
     1141 aaacgctggt ggatggtatc cgcaaagagg ttgcggctga aggcggtagc gtgctgctac
     1201 tttccggtgg cgacattaac actggcgtgc ccgagtctga cttacaggat gccgaacctg
     1261 attttcgcgg tatgaatctg gtgggctatg acgcgatggc gatcggtaat catgaatttg
     1321 ataatccgct caccgtatta cgccagcagg aaaagtgggc caagttcccg ttgctttccg
     1381 cgaatatcta ccagaaaagt accggcgagc gcctgtttaa accatgggcg ctgtttaagc
     1441 gtcaggatct gaaaattgcc gtcattgggc tgacaaccga tgacacagca aaaattggta
     1501 acccggaata cttcactgat gtcgaatttc gtaagcccgc cgatgaagcg aagctggtga
     1561 ttcaggagct gcaacagaca gaaaagccag acattattat cgcggcgacc catatggggc
     1621 attacgataa tggtgagcac ggctctaacg caccgggtga tgtggagatg gcacgcgcgc
     1681 tgcctgccgg atcgctggcg atgatcgtcg gtggtcactc gcaagctccg gtctgcatgg
     1741 cggcagaaaa caaaaaacag gtcgattacg tgccgggtac gccatgcaaa ccagatcaac
     1801 aaaacggcat ctggattgtg caggcgcatg agtggggcaa atacgtggga cgggctgatt
     1861 ttgagtttcg taatggcgaa atgaaaatgg ttaactacca gctgattccg gtgaacctga
     1921 agaagaaagt gacctgggaa gacgggaaaa gcgagcgcgt gctttacact cctgaaatcg
     1981 ctgaaaacca gcaaatgatc tcgctgttat cgccgttcca gaacaaaggc aaagcgcagt
     2041 tggaagtgaa aataggcgaa accaatggtc gtctggaagg cgatcgtgac aaagtgcgtt
     2101 ttgtacagac caatatgggg cggttgattc tggcagccca aatggatcgc actggtgccg
     2161 actttgcggt gatgagtgga ggaggaattc gtgattctat cgaagcaggc gatatcagct
     2221 ataaaaacgt actgaaagtg cagccattcg gcaatgtggt ggtgtatgcc gacatgaccg
     2281 gtaaagaggt gattgattac ctgaccgccg tcgcacaaat gaagccagat tcaggtgcct
     2341 acccgcaatt tgccaacgtt agctttgtga cgaaagacgg caaactcaac gacctgaaaa
     2401 tcaaaggcga accggtcgat ccggcgaaaa cttaccgtat ggcgacatta aacttcaatg
     2461 ccaccggcgg tgatggctat ccgcgccttg ataacaaacc gggctatgtg aataccggct
     2521 ttattgatgc cgaagtgctg aaagcgtata tccagaaaag ctcgccgctg gatgtgagtg
     2581 tttatgaacc gaaaggtgag gtgagctggc agtaatccga aagtgccgga tatttgcatc
     2641 cggcacaatg cttaatcgcg gcgggcgata tcagcaaatt tggcatcgag gatcttcgcc
     2701 agatcgcctg ccgccagttc gatatccagt ccgcgcttgc cgccagaaac ataaatagtg
     2761 gcaaattctt gtgcgggggc gtcgataatc gtcggcagac gttttttctg ccccagtggg
     2821 ctaatccccc caaccaggta tcccgtcgaa cgctgcgcgg ccatcggatc ggccatctca
     2881 actttcttgg cacccagcgc ttttgctact tttttaagat ccagttgacc tgcgaccggc
     2941 gtaacggcca ctgccagatg tttcatatca ccgttcactg ccaccagtag cgttttgtag
     3001 acttgatccg gattcaaacc taattttttg acgacttcat cgccaaaatt ggtttcagcc
     3061 ggatcgtgct cgtaggtatg gatttgaaac gaaatcttgt ttttttcgag taatttaact
     3121 gcgggtgtca tggtaatttt cctgccttaa acaaaaaaac gaagcaagca tacgcctgat
     3181 ggcggtccaa aaaaaagagt catcttgcct aagagtattg gcaggatggt gagattgagc
     3241 gacaatcgag ttacaccgtc gcttaaagtg acggcataat aataaaaaaa tgaaattcct
     3301 ctttgacggg ccaatagcga tattggccat ttttttagcg caacatttgc ggcaaattcc
     3361 cttctccata caggtgtagt gcaccgaccg cgaccacata tcgccccggc ggcatggcgc
     3421 gtaatttatc ccgccaggcg agatttcgct gatgcatcag cacatcgtac agcgactgac
     3481 tgaacgtatt gggcagcgtt atatcattat tttgcggagg tgcattcagc caccagctca
     3541 tcatttgttg cagcaaccgt gcgttggtat gccagtgggt cagcgtatcg tccagcagcg
     3601 ccagtccttt gtcagggagc tggagcaaca tggtaatctg gttttcagcc ccttccagtt
     3661 caatcacggg tttatgttgt tgcttcgccg cctgcaataa ctggtaatcg ataccgtatt
     3721 ctgcccgcag ccccagtttt tgtgcctgcg tcgcctgaag aaccatcgcg atttgccaca
     3781 gcggttgagt agaaaagagc gacggagaaa tgcccatctc ctggctaatg tgctgcagat
     3841 tttggagttg ctcctcgtta atgcgctctt ccagcgcctc gcaagtaggc aaattagcaa
     3901 aaggcgtatc gctggtggaa acatccgcct cgacgatcag cgcatcggcg tttttgagct
     3961 ttttgagcaa acgggtgggc aggggagtca tatcgtggct acccatatga atactgccaa
     4021 tcagatgaaa atggcgattg ccgggaaggg tgatatcgat ggcaggccag gtgtaatgat
     4081 taccgcgcag cgcggcccaa agcgttttta cccggtacaa cagatccata cgacctccct
     4141 ttgtgaaata tcatgctagc gcgcggtgag ggatggcgca aatggagttg gggacttgtt
     4201 taatgtgttt gtatgattca gtatgttctt gcatcgctat tcacagggaa gcaacagtta
     4261 aaaaccatga aacaggcaac aagaaaaccg acgacacccg gagatattct tctctatgaa
     4321 tatctggaac cgctcgattt gaaaatcaat gagttagcag agttgctgca tgttcatcgt
     4381 aatagcgtca gtacactgat caataataat cgtaaactca ccactgagat ggcattccgt
     4441 ctggcgaaag tttttgatac cacagtcgat ttttggctaa acctccaggc ggcagttgat
     4501 ctttgggaag ttgaaaacaa catgcgcacc caggaagaat tgggacggat tgaaacagtg
     4561 gctgaatatt tggcacgccg tgaagagcgt gcaaaaaagg tcgcgtaagg ccaaaacatc
     4621 gcttcatctc gtaggccgga taaggcgttc acgccgcatc cggcatccga gcaccatagc
     4681 ctgatgcgac gcttacccgt cttatcaggc ctacaaacct gtgcctgaac cgtaggccgg
     4741 ataaggcgtt tacgccgcat ccggcagtca tgcgtcgatg ccaaatgcgc cgccctaaag
     4801 cagcgcatcc gcaatgacgt acttattcct tcggtttaaa ccgcagcaac cggttggcgt
     4861 tactcactac ggtaatcgac gagagcgcca ttgccgctcc ggcaactacc gggttaagca
     4921 gtgttccagt aaacggccac aaaataccag cggcgaccgg aataccaatg ctgttgtaga
     4981 taaacgcacc gagcaggttc tgcttcatat tgcgcagcgt tgcgcgggaa atcgcgagcg
     5041 catctgcaac acccatcagg ctatggcgca tcagggtaat cgccgcggtt tcaatggcaa
     5101 catcactgcc gccacccatc gcaataccga catccgcctg agccagcgct ggcgcgtcgt
     5161 taatgccgtc gcccaccatt gccacctgac gtccttcact ttgcagacgt ttgatcgctt
     5221 cggctttacc gtctggcagc accccggcga ttacctcatc aatccctgct tctttggcga
     5281 tcgcattggc ggtggttggg ttatccccgg tcaacatcac cagacgatat cccgctttat
     5341 gcaggcgttg cagcgccgcc acgctatcac tacgcaacgg atcgcgtaca gccagcaggg
     5401 ctactacttt cccgtcaatc gccagcagca caggcgttgc tccttgcgat gcctgagctg
     5461 aaatatcggc ttcaatcgct ttagtatcga cttgctggtc atttaacagc gccggattac
     5521 ccagcaataa cgcatgacct tcagcttcac cgcttacgcc cagcccgcgc aatgtgcgga
     5581 aaccgttgac ctgcggcagc tgcatatcgc ctgctttatc gaggatcgct cgtgccagcg
     5641 gatggctgga accttgctcc agcgccgccg ccagacgcaa tgcttgcgct tcatcaacat
     5701 cagcaaatgt ttttactgcg acaacctgcg gcttcccttc ggtcagcgtc ccggttttat
     5761 cgaacacgac ggtatcgagt gtactggcgc gttgcagcgc gtcggcgtcc cgcaccagca
     5821 cgccaaactc agccgcccgc ccgacgccgg aaataatcga cattggcgtc gccagcccca
     5881 gcgcacacgg acaggcaata atcagcaccg tggtggctat caccagggta tagacaatct
     5941 gcggtgccgg accaaagaaa taccagattg ctgcactgat cagcgcaatc accactacta
     6001 ccggcacaaa tacggctgag attttatccg ccagctgacc gatttctggc ttgctgctct
     6061 gggcctggcg caccatgcga ataatccttg acagcgtggt atggctgcca accgcactgg
     6121 cgcgaaatag cacgctaccg tcctgtacca ctgtcccggc atggacgctt tcgccttcgc
     6181 ctttttgctg cgggattggt tcgcccgtca gcatcgcttc atccagccat gcttcgccct
     6241 gggtaatctc gccatctacc ggcacgcgat cgccggtcgt caggcgcagt aacatccctg
     6301 gctgaacttc cgccagcggc acgctttttt caccctctgc ggtgaccact cgcgccgtcg
     6361 gtggggttaa atcgagtaat ttctccagcg ccttagaaga acgctgacgc gcgcgcgctt
     6421 ccagcatatg gccgagatta atcagaccga taatcatcgc actggcttca tagtaaagat
     6481 gccgcgcttc catcgggaac cacagcggcc acaggttgac gctcatcgaa tagagccacg
     6541 ccacacccgt acccagcgcc accagcgtat ccatcgtcgc cgcaccgttc agcaggcttt
     6601 tccacgcgct gcggtaaaaa tgcccgccgg cgaaaaccat taccgccagg gttatcaggc
     6661 cgataactaa ccacaggctg cggttgtcag cggtgaccat catgttatcg ccgatcatcc
     6721 cccagaccat taccggaata cccaccgcca gtgcgacaat cgcctgccag cggaagcgct
     6781 tcatcgtagc gacggcggtt tcctgctggc gctcgcggcg tttcgcgtca tcttcaatcg
     6841 cttccgcgcc gtagcccgct ttttccaccg cctgcactaa atcttgtggg gaggcactgc
     6901 ccatcaccag cgcagtacgc tccgccaggt ttacccgtgc ctgagtgacg cccggtacgc
     6961 tttgcagcgc attttgtacg cgggtgacac agctggcgca gctcatgccg ctcagcagca
     7021 actgctggct gtcatcgtca tcggcggtcg ctgccggaag cgcctcagaa accgctgtca
     7081 gtgcttccga cgggattgat gactccgcca gcggtttagc ctttgggtgg cttacagatg
     7141 cgtcataacc cgcttgtttg atggtttcga tcagctgttc tgcactggca gtcccggtaa
     7201 cgtgcgcttc agtgatagac acatccgctt gttccacatc cgggcgctgt tcgagacttt
     7261 ctttcacgcg tttaacgcag tgaccgcagg acaggccgtc cagggtcagg tcgatagttt
     7321 gtgacataaa acactccttt aagacagttt tgactggctg tgataaaggt taaaccttcc
     7381 agcaagggga aggtcaagaa attaataaac caggcgggta aaagtccgta aagattaaaa
     7441 aatcggctcg atttgcatca ggattagaca tttatttctt tgttttcctg tagttaagtt
     7501 gctggtgcta agttaaatca ggatgcctga aaatcggcac cggggtgagg aattacctcc
     7561 cgcatctata aaaaggagtt aacaaaagat gttagatgca aacaaattac agcaggcagt
     7621 ggatcaggct tacacccaat ttcactcact taacggcgga caaaatgccg attacattcc
     7681 ctttctggcg aatgtaccag gtcaactggc ggtagtggct atcgtgacct gcgatggcaa
     7741 cgtctatagt gcgggtgaca gtgattaccg ctttgcactg gaatccatct cgaaagtctg
     7801 tacgttagcc cttgcgttag aagatgtcgg cccgcaggcg gtacaggaca aaattggcgc
     7861 tgacccgacc ggattgccct ttaactcagt tatcgcctta gagttgcatg gcggcaaacc
     7921 gctttcgcca ctggtaaatg ctggcgctat tgccaccacc agcctgatta acgctgaaaa
     7981 tattgaacaa cgctggcagc gaattttaca tatccaacag caactggctg gtgagcaggt
     8041 agcgctctct gacgaagtca accagtcgga acaaacaacc aacttccata accgggccat
     8101 agcctggctg ctgtactccg ccggatatct ctattgtgat gcaatggaag cctgtgacgt
     8161 gtacacccgt cagtgctcca cgctcatcaa tactgttgaa ctggcaacgc ttggcgcgac
     8221 gctggcggcg ggtggtctga atccgctgac gcataaacgc gttcttcagg ccgacaacgt
     8281 gccgtacatt ctggccgaaa tgatgatgga agggctgtat ggtcgctccg gtgactgggc
     8341 gtatcgcgtt ggtttaccgg gcaaaagcgg tgtaggtggc ggtattctgg cggtcgtccc
     8401 tggcgtgatg ggaattgccg cgttctcacc accgctggac gaagaaggta acagtgttcg
     8461 cggtcaaaaa atggtggcat cggtcgctaa gcaactcggc tataacgtgt ttaagggctg
     8521 atcatgatga acacggaagg taataacggt aacaaacccc tcggtctatg gaatgtcgtt
     8581 tccatcggta ttggggcaat ggtgggggcg gggatcttcg cgctgctggg gcaggctgcg
     8641 ttgctaatgg aagcctcgac ctgggtcgcc tttgcttttg gcggtattgt ggcgatgttt
     8701 tccggttatg cctatgcgcg tctgggggcg agctatccca gcaatggcgg cattatcgac
     8761 ttctttcgtc gcggattagg caacggcgtc ttttcgctgg cgctctcgtt actgtacctg
     8821 ttgacgctgg cggtgagcat cgccatggtc gcccatgctt ttggcgctta tgccgtgcag
     8881 tttttgcatg aaggcagcca ggaggagcac cttattttgc tctacgcgtt ggggagcatt
     8941 gcggtgatga cgcttttcaa ctccttaagc aaccatgcgg tagggcggct ggaagtgatc
     9001 ctcgtcggca ttaaaatgat gatcctgtta ttgctgatta ttgccggtgt ctggtcgctg
     9061 caaccagcgc atatttccgt ctctgcgccc cccagctccg gtgcgttctt ctcctgtatt
     9121 gggataactt tccttgccta tgcgggcttt ggcatgatgg cgaacgcggc ggataaagtg
     9181 aaagatccgc aggtcattat gccacgggcg tttctggtgg cgattggcgt taccacgttg
     9241 ctttatatct cgctggcact ggttttgctt agcgatgtat cggcattaga gttagaaaaa
     9301 tatgccgata ccgccgtagc gcaggctgct tctccgctgc tcggacatgt gggttatgtg
     9361 atcgtcgtca tcggcgcttt actggcgacg gcttcagcca ttaacgcgaa cctgttcgcc
     9421 gtgtttaaca tcatggacaa catgggcagc gaacgcgaac tgccgaagct aatgaataaa
     9481 tccctgtggc ggcagagtac ctggggcaac atcattgtcg tggtgttgat tatgctgatg
     9541 acggcggcac tgaatttagg ctcactcgcc agcgttgcca gcgccacctt tttgatttgc
     9601 tacctggcgg tgtttgtggt ggcgatccgc ctgcgtcatg atattcacgc ctcgttgccg
     9661 attcttatcg ttggtacgtt ggtgatgttg ttggtgatcg ttggctttat ctacagtctg
     9721 tggtcccagg gtagccgtgc gttgatatgg attattggct cactcttact cagccttatt
     9781 gtggcaatgg tcatgaagcg caataaaacc gtataacatc tctctgtgcg cagtacttcc
     9841 tgtattattg tggtggcggt cgatattcgc actggcaaaa aaacgtgctt gaatatctgt
     9901 tgaaaccctt taacaaagca caggaggcgt tgcgcgaacg atgaacatca gcgatgtagc
     9961 aaaaattacc ggcctgacta gcaaagccat tcgcttctat gaagagaagg ggctggtgac
    10021 gccgccgatg cgcagcgaaa acggttatcg cacctacacg cagcagcatc tcaacgaact
    10081 gaccttactg cgccaggcac ggcaggtggg ctttaacctg gaagagagcg gcgagctggt
    10141 gaatctgttt aacgacccgc agcggcacag cgccgacgtc aaacggcgca cgctggagaa
    10201 ggtggcggag atcgaacgac acattgagga gctgcaatcc atgcgcgacc agctgctggc
    10261 actggcgaat gcctgccctg gcgatgacag cgccgactgc ccgattatcg aaaatctctc
    10321 cggctgctgt catcatcggg cagggtgatt aagacgagac ggctcggata tgtagggtta
    10381 tcccttctat cgcaatgact tcaacatgcg tacctgcacc gagatcctcg ctggcgctga
    10441 caggccatga actgtcaccg acgcgcatat gaccgcgccc gttgaccagc ggagattcca
    10501 gcacaaaacg tcggccaatc agctgctgcc cgcgctggtt taaatgacta tcgctgtgct
    10561 tttgttcgcg cacccgccgc gacaaccatt tccaccacag ccaggcggcg agcagcgtca
    10621 ggatggcaaa cattacccct tgccactccc aacccagcgg caccagccag accaccaggc
    10681 cggtaatcac cgctgccacg ccgctccaca acaaataacc atttccgccc agcatctcgg
    10741 ctgccagcag caaaccgccg agactgagcc agaaaatatg tggatgaacg accattaact
    10801 ccatcatggc tgagtccgtt tgttggcgct gtctttcacc agttcggcaa tcccggcaat
    10861 cgaccccatc aggctgctgg cctctaatgg catcatcact actttgctgt tactggagga
    10921 accgatctgc tgtaacgctt cggtgtattt ctgcgctacg aagtagttca ccgcctgaat
    10981 atcaccggag gcgatagctt cagacaccat tttggtggcg cgggcttctg cttcggcgga
    11041 acgttcacgc gcttcagcct gtaaaaacgc cgactgacgt tcgccttccg ctttcaggat
    11101 ttgcgactgt ttttcacctt cggctttgag gatttccgcc tgacggatcc cttccgcttc
    11161 aagaatgtaa gcgcgtttgg tacgttccgc tttcatctgc gcgttcattg aagagataag
    11221 ctctgccggt gggcgcacgt cgcgaatttc aatacgggtg actttaatcc cccacgggtt
    11281 ggtggcttca tcgacaatac gcagcaggcg tgagttgatg ctgtcgcgct gagagagcat
    11341 ttcgtcaagt tccattgaac ccaacacggt acggatgtta gtcatggtca ggttgatgat
    11401 cgccagctcc agattgctga cttcataggc agcgcgtggc gcgtcaatca cctgaataaa
    11461 acagactgcg tcgatggtaa cgttggcgtt atctttcgag ataacttcct gggaagggat
    11521 atcgagcact tgctccatca tattgatctt gcgaccaatg cgatccataa acggcaccac
    11581 cagactgagc cccggctgta acgttttggt atagcgacca aaacgttcta ccgtccattg
    11641 atagccctgc ggcacgattt tgacgcccgc gccgacaatg accagcgcga caaaaatgag
    11701 aatcgggata aagataagca tcggaaaaac ctcctgttgt accgtccata atcagcaaaa
    11761 ttgctgcttg attaaacaaa ttatacctga ttactgaaag agagttcccc cttattcctg
    11821 cgaaggataa actgttttta gtaaaaatca gaaaaaggga acagcgatgc aggaaaatag
    11881 tcctttgctt cagctacaaa acgtaggata tctggcgggt gatgcgaaga ttcttaataa
    11941 catcaatttt tcgctgcgtg ctggcgaatt taagttaatt accggtcctt ctggttgtgg
    12001 caaaagtacg ctgctaaaaa tagttgcttc attgatcagc ccaaccagcg gaacgttact
    12061 gtttgaaggt gaggatgtca gcacactaaa gccagaaatc taccgccaac aagtctctta
    12121 ctgcgcccag acaccgacgc tgtttggcga tacggtatac gataatctga tctttccttg
    12181 gcagatccgt aaccggcagc ctgacccagc catttttctc gattttctcg aacgcttcgc
    12241 cttgccggac agcattttga cgaaaaatat cgccgagcta tctggtggtg aaaaacaacg
    12301 catctcactg attcgtaacc tgcaatttat gccgaaggtt ttattgctgg atgaaatcac
    12361 cagtgcgctg gatgaaagta ataaacataa cgttaatgag atgatccatc gttatgtgcg
    12421 cgagcaaaat attgccgtgc tgtgggtgac acacgataaa gacgaaatta atcatgcgga
    12481 taaagtgatt acactgcaac cgcatgccgg agaaatgcag gaagcacgct atgaactcgc
    12541 ataatattac taacgaatca ttggcactgg cattaatgct ggtggtggtg gcaatcttaa
    12601 ttagccataa agaaaaactg gcgctggaga aagatatttt ctggagcgtc gggcgcgcga
    12661 taattcagct gattattgtc ggctatgtgc tgaagtatat tttcagcgtg gatgatgcca
    12721 gcctgacatt attgatggtg ttatttatct gctttaatgc ggcgtggaac gcgcaaaaac
    12781 gcagtaaata tattgctaaa gcttttatct catcgtttat tgccattacg gttggggcgg
    12841 gaattaccct ggcggtgctg attctctcag ggtcgattga atttatcccg atgcaggtga
    12901 tccctatcgc cgggatgatt gccggtaacg ccatggtagc ggtggggttg tgttacaaca
    12961 atttagggca acgggtcatt agcgaacagc aacagattca ggagaaactg agtcttggcg
    13021 cgacgccgaa gcaggcttca gcgatattga ttcgcgacag tattcgcgcg gctttaattc
    13081 cgacggtcga ttcagcaaaa acggttggct tagtgagttt accaggaatg atgtccgggc
    13141 tgatatttgc cgggattgat ccggtgaagg cgattaaata tcagattatg gtgaccttta
    13201 tgctgctctc aaccgccagc ttgtcgacca ttattgcctg ctatttaacc tatcgtaagt
    13261 tttataattc gcgccaccag ttggtggtga cgcaattgaa gaagaaatga tgcgatgccg
    13321 gatgcgcagc atcgcatccg gcgttgtggt tcatgtgccg aacaacggaa tatcaataca
    13381 acaatgcata cagctggcgg cgatacttcg acgccagtgc atcacccgta cccagcgcag
    13441 cgaggatctc ctggaacgtt ttacgcgtct gaccgtctgc ggcggtgaga tctttacgca
    13501 gatgcccgaa cagcaactcc agcgcctctt cattgcgccc aacctgatgc agttgcagcg
    13561 ccagttgcgt cgccagtgcg gcatcttctg gattctccgc cacctgctgt tgcaactgtt
    13621 gaatttccgg cgtatcagcc gcctgcttca gcagttcgat ttgcgccacc agcccctggt
    13681 agcgggtgtc ctgatcctgc aacggaatgg ttttcagcac cgcttccgca tcttcagaac
    13741 ggttcagcgc aatcagcgtt tctgccagca gcaggccgat ctccccgttc tgattcgaca
    13801 actgccaggc gtctttcagc aatggcaggg catcggtgta attgccttcc tgcatcagtt
    13861 gcatcgcctg ctgcgctttc agctcttctt cgcgcggcag cactttatcc agcagggcgc
    13921 ggatcgcctc ttccggttgc ggcccctgga agccatctac cggttgcccg ttctggaaca
    13981 gatacacggt cggaatcgcg cgcagaccaa actgggcggc aatcatctgc tccgcgtcgc
    14041 agtccagctt cgccagaata aattgcccgt tgtactgcgc cgcgaggctt tccaggatcg
    14101 gggttaactg caaacagtgc tggctacgtt cagaccaaaa atagaacagc accggagtgg
    14161 tcatcgactg ttcaagaacc tgttgcaggt tagattcgtt aatgttgaca atattttcta
    14221 cggacatgga gtcgctctct gttgtcgata ttttctttga catgggggct taagcgcgcg
    14281 cttcaactca cccctgcaat attttgtcca tcacgcgccc aggcagcagg cgcttgagca
    14341 ccattactgc ccaggtcacc agcgttaccg gatagcgcat cttcggcttc tcgctaataa
    14401 aagcatggcg cactttgtcg accaccgctt ccggtcccaa cgtaaagcgg gcggcgatgc
    14461 cgggattttc gactggttta tcactttgcg tctggttgac gttgtcggtg aagcgagtac
    14521 gaatgggacc gggttcgatc aggctgactt taattccgct gtggcgtagc tccatgcgca
    14581 gcgcgtctga ccacgcctcc agcgcatatt tactggccgc gtaagcgcca cgacccggcg
    14641 tggagattaa tcccatcacc gatgatgtca tcacaatacg cccttcaccg tgcggtaaca
    14701 tcgcgggtaa caggcgcatg gtgagctggt gtgcgccgaa aaagttggcg gaaaactgct
    14761 gttccatctg cgcacggctg atggtggaaa gggggccata catgccgaat ccggcattgt
    14821 taaagatccc atacagacaa ttatcggtca gggcgatcac ctcgtctgct gcgcgatcaa
    14881 cactttctgg tgaatccaga tcgatcaaca cgccggtaaa tcccatgttg ttcatacgct
    14941 caacatcatc cggttttcgg caacctgcca gcacatgaaa accctggcgt tttaattcga
    15001 gcgcgctttc caggccaatt ccactggaac atccggtaat taagaccgat ttttgcataa
    15061 ctttacctgt caggatctcc gttgctttat gagtcatgat ttactaaagg ctgcaactgc
    15121 ttcgccatcc agtcggcaat aaacggctgg gcgtcgcggt tgggatgaat accgtcatcc
    15181 tgcatccatt gtggcttgag gtagacctct tccataaaaa agggcagcag cggaacatca
    15241 aactctttgg cgagtttggg gtaaatggcg ctaaaggctt cattataacg gcgaccatag
    15301 tttgcaggca gacgtatttg cattaacaat ggttcagcgt tggcggcttt gacatcctgc
    15361 aaaatctggc gcagcgtttg ctcggtttgc tgtggctgaa aaccacgcaa accgtcattg
    15421 ccgcccagtt caaccagcac ccagcgcggc tgatgctgtt tcagcagagc cggaaggcgc
    15481 gccagtcctt gttgcgaggt gtcgccgctg atgctggcat taactaccga cgttttactc
    15541 tgccacttat cattcaacaa ggcaggccag gccgcgctgg cagacattcg atacccggcg
    15601 ctcaggctat cacccagaat caataacgtg tccgctgcgg cggcacggaa ggttaacagg
    15661 accaggaaca ggaagggcaa atgccagcgg aaaacattgt tgaagttcat catcttaaga
    15721 agtccgtcgg tcagggggag catgaactct ccatcctcac cggagttgag ctggttgtca
    15781 aacgtggcga gaccatcgca ctggtgggcg agtcgggatc gggtaagtca accttgctgg
    15841 cgatcctcgc cgggcttgat gacggcagca gtggcgaagt gagtctggtg ggacaaccgc
    15901 tacataatat ggacgaagaa gcgcgggcaa agttgcgcgc gaagcacgtc ggctttgttt
    15961 ttcagtcatt tatgttaatt cctaccctta acgcgctgga aaacgtcgag cttccggctc
    16021 tgctgcgcgg tgagagtagc gcggaaagtc gtaacggggc gaaagcgttg ctcgaacagt
    16081 tagggctggg taaacgtctg gatcatcttc cggcacagct ttccggcggt gaacagcaac
    16141 gagtggcgct ggcacgagcc tttaatggtc gacctgatgt gctgtttgcc gacgaaccca
    16201 ccggcaacct tgaccgccag acgggcgata aaattgccga cctgctgttt tccctcaacc
    16261 gtgaacatgg caccacgttg attatggtga cccacgacct gcaactggcg gcacgctgcg
    16321 accgctgctt acggctggtg aacgggcagt tgcaggagga agcatgattg cacgttggtt
    16381 ctggcgcgaa tggcgttcgc cgtcgctatt aattgtctgg ctggcgctaa gcctggcggt
    16441 ggcctgcgtg ctggcgctgg gcaatatcag cgatcgcatg gagaagggct taagccagca
    16501 aagccgtgag tttatggcgg gcgatcgggc gttgcgcagt tcacgcgaag tgccgcaagc
    16561 gtggctggag gaagcgcaaa agcgcggcct gaaagtcggc aagcagctga ctttcgccac
    16621 aatgaccttt gcaggcgaca caccgcagct ggcgaacgtc aaagcggtgg atgatatcta
    16681 cccgatgtat ggcgatctgc aaactaatcc ccctggcctg aaaccgcagg cgggcagcgt
    16741 attgctggcc ccacgcctga tggcactgct taacctgaaa acgggcgaca ccattgacgt
    16801 gggcgatgcc accttgcgga ttgccggaga agtgattcag gaaccggatt ccggttttaa
    16861 ccccttccag atggctccgc gtctgatgat gaatctggcg gatgtcgata aaaccggagc
    16921 cgtgcagccg gggagtcggg tcacctggcg ttataaattc ggcggcaacg agaaccagct
    16981 cgacggctat gagaaatggt tgttacctca gcttaaaccc gaacaacgct ggtacggtct
    17041 ggaacaggac gaaggcgcgc tggggcgatc gatggaacgc tcgcaacagt tcctgctgct
    17101 ttcggcgctt ctgaccttgc tgctggcagt ggcagcggtg gcggtagcga tgaatcatta
    17161 ctgtcgcagt cgctacgatc tggtggcgat cctcaaaacg ctgggggcag ggcgaacgca
    17221 actgcgtaag ctaatcgtcg gtcagtggtt gatggtgctg acgctttcag ccgttaccgg
    17281 tggggccata ggcctgttgt tcgaaaacgt gttgatggtg ctgctcaagc ccgttctgcc
    17341 tgctgcacta ccgccagcca gcctctggcc gtggctgtgg gcgcttggca ccatgacggt
    17401 catctcgctg ctggtgggct acgaccatac cgcttgttgc tggcaacgca gcctttacgc
    17461 gtattacgta atgatgtggt agcgaacgtc tggccgctga agttttatct gccgattgtc
    17521 agtatggtgg ttgtgctgct gctcgccgga ttaatgggtg gcagcatgct gctttgggcg
    17581 gtgctggcgg gcgcagtagt actggctttg ctgtgcggtg tgctgggctg gatgcagctg
    17641 aatgtacttt gccgcatgac gctgaaatcg ctacctctgc gcctggcggt tagccgcctg
    17701 ttacgtcagc cgtggtcaac gttaagccag ctttcggcat tttcgctctc ctttatgctg
    17761 ctggcgctgt tgctggtatt gcgttgcgat ctgctcgacc gctggcagca gctaccgcca
    17821 gaaagcccga actacttttt aattaacatc gccacagaac aggtagcacc gctaaaagcg
    17881 ttcctcgcgg aacatcatat agtcccggaa tcattttatc cggtagtgcg ggcgcggctg
    17941 acggcgatta acgataagcc gacagaaggt aatgaagatg aggcgcttaa tcgcgaactc
    18001 aatcttacct ggcaaaatac gcggcccgat cataatccga ttgtcgccgg taactggccg
    18061 ccaaaagccg atgaagtgtc gatggaagag gggctggcga aacgcttaaa cgttgccctc
    18121 ggtggtaccg tgacttttat gggcgatacc caggagttcc gcgctaaagt gaccagcctg
    18181 cgcaaagtgg actgggaaag tctgcggcct aatttctatt ttattttccc ggaaggggca
    18241 ttagacgggc aaccgcagag ctggcttacc agtttccgct gggagaatgg caacggcatg
    18301 ttgacgcaac tcaaccgcca gttcccgacc attagcctgt tagatattgg cgcgatttta
    18361 aaacaggtcg gttaggtgct ggagcaggta agtcgggcgc tggaggtgat ggtggtgctg
    18421 gtcaccgcct gcggtatgtt gctgttgctg gcacaggtgc aggtgggaat gcgccagcgt
    18481 catcaggagc tggtggtatg gcgcacactc ggtgcgggga aaaaactgct gcgcacgaca
    18541 ttgtggtgtg agttcgccat gcttgggttt gtttccggcc tggtggccgc aattggtgcg
    18601 gaaacggcac tggcagtgtt gcaggcgaaa gtgtttgatt tcccgtggga gccagactgg
    18661 cgattgtgga ttgttctgcc gtgcagcggt gcgctgctgc tgtcgctttt cggcggctgg
    18721 ctgggtgcgc gactggttaa gggtaaggcg ctgttcaggc agtttgcggg gtgatgagag
    18781 taaataaggg gcgttctggt tgaatggaac gccttgttta aattaattct acaatatgtt
    18841 tcattgatga tgttattgaa ttggtgattt cctatctttc tattgctgat attaatctga
    18901 attggtggag tttaataatt ttaaatatag ccctacaaaa ataactcaga ctaataaaat
    18961 cataaatcat atgcgttgaa tggatattat ccatatagtg aatttgttga tgatgaattc
    19021 atctgtgcta aaaattttag tttaataaaa tattgaaagt gacctgtaat aacagttatt
    19081 gttgattgag aacaaataag tttatgtgaa aaatatataa atacattagc tggtcatgtg
    19141 tgtcatttta tttttttgtt gctaacacag ggatatgaac aataactaaa agggcacttt
    19201 atatgagcgg aaaaccagcg gcgcgtcagg gagatatgac tcagtatggc ggtcccattg
    19261 tccagggttc ggcaggtgta agaattggcg cgccaactgg cgtggcgtgc tcggtgtgtc
    19321 cgggcgggat gacctcgggc aacccggtga acccgctgct cggtgcaaaa gtacagcccg
    19381 gcgagacgga ccttgcgctg cccgacccgc tgccgttcat tctctcccgc acctacagca
    19441 gctaccggac gaagacgcct gcgccagtgg gaactttttg gccccggctg gaaagcgcct
    19501 tctgatatcc gcttacagat acgcgatgat gcactggtac tcaacgacaa cggcgggcgg
    19561 agcattcact ttgagccgct gctgccgggg aaggctgtgt acagccgcag tgagtcaatg
    19621 tggctggtgc gtggcggtaa ggcagcgcag ccggacggcc acacgctggc acgactgtgg
    19681 gcgtcgctgc cgccggatat ccggttaagc ccgcatcttt acctggcgac caacagcgca
    19741 caggggccgt ggtggatact ggggtgatct gagcgggtgc cgggtgctga ggacgtactg
    19801 ccagcgccgc tgccgccgta ccgggtgctt accgggatgg cggaccgctt cgggcggacg
    19861 ctgacgtacc ggcgtgaggc cgcaggcgac ctggccgggg aaatcaccgg cgtgacggac
    19921 ggtgccgggc gggagttccg tctggtgctg accacacagg cgcagcaggc ggaagaggcc
    19981 cggcagcagg cggtcgtcgc cggagcaaaa cgaccggaca ttcctgattc actgccggag
    20041 agcacagagt acggccccga caggggtatc cgcctttcgg cggtgtggct gatgcacgac
    20101 ccggcatacc cggagagcct gcccggtgcg ccactggcgc ggtacacgta tacggaagcc
    20161 ggtgaactgc tggcggtata tgaccgcagc aatacgcagg tgcgcgcttt cacgtatgac
    20221 gcgcagcacc cgggccggat ggtggcgcac cgttacgcgg gaaggccgga gatgcgctac
    20281 cgctacgacg atacggggcg ggtggtggag caactgaacc cggcagggtt aagctaccgc
    20341 tatctttatg agcaggaccg catcaccgtc accgacagcc tgaaccggcg tgaggtgctg
    20401 catacagaag gcggggccgg gctgaaacgg gtggtgaaaa aagaactggc ggacggcagc
    20461 gtcacgcgca gcgggtatga cgcggcagga aggctcacgg cgcagacgga cgcggcggga
    20521 cggcggacag agtacggtct gaatgtggtg tccggcgata tcacggacat caccacaccg
    20581 gacgggcggg agacgaaatt ttactataac gacgggaacc agctgacggc ggtggtgtac
    20641 ccggacgggc tggagagcag ccgggaatat gatgaaccgg gcaggctggt atcggagaca
    20701 tcgcgcagcg gggagacagt acgctaccgc tacgatgacg cgcacagtga gttaccggcg
    20761 acgacaacgg atgcgacggg cagcacccgg cagatgacgg cggttcaccg cgaggaaggt
    20821 atcagccttt accgccacta tgacaaccgt ggccggttaa cctcggtgaa agacgcacag
    20881 ggccgtgaaa cgcagtatga gtacaacgcc gcaggcgacc tgactgccgt tatcaccccg
    20941 gacggcaacc ggagcgagac acagtacgat gcgtggggaa aggcggtcag caccacgcag
    21001 ggcgggctga cgcgcagtat ggagtacgat gctgccggac gtgtcatcag tctgactaac
    21061 gagaacggca gtcacagcga cttcagctac gatgcgctgg accggctggt acagcagggc
    21121 ggctttgacg ggcggacgca acgttatcat tatgacctga ccggaaaact cacgcagagt
    21181 gaggatgagg ggcttgtcac cctctggcac tacgatgcgt cggaccgcat cacgcaccgg
    21241 acggtgaacg gcgccccggc agagcagtgg cagtatgacg gccacggctg gctgagagaa
    21301 atcagccacc tgagcgaagg ccaccgtgtc gctgtccact acggctacga cgataagggc
    21361 cgcctgacgg gcgaacggca gacggtggag aacccggaga cgggggaact gctgtggcag
    21421 catgagacga aacacgccta caacgaacag gggctggcaa accgcgtcac gccggacagc
    21481 ctgccgccgg tggagtggct gacctacggc agcggttacc tggcgggcat gaagctgggc
    21541 gggacgccgc tggtcgagta tacgcgggac aggctgcacc gtgagacggt gcgcagcttc
    21601 ggcagcatgg caggcagtaa tgccgcatat gaactgacca gcacatacac ccccgcaggc
    21661 cagttacaga gccagcacct gaacagcctg gtgtatgacc gtgactacgg gtggaatgac
    21721 aacggcgacc tggtgcgcat cagcggtccg cgacagacgc gggaatacgg ctacagcgcc
    21781 acgggcaggc tggagagcgt gcgcaccctc gcaccggacc tggacatccg catcccgtat
    21841 gcgaccgacc cggcgggaaa ccggctgccg gacccggagc tacacccgga cagcacgctc
    21901 acggcgtggc cggataaccg catcgcagag gatgcgcact atgtttacca ctatgatgaa
    21961 tacggcagac tgacggagaa gacggaccgc atcccggcgg gtgtgatacg gacggacgac
    22021 gagcggaccc accactacca ctacgacagc cagcaccgcc tggtgttcca cacgcggata
    22081 cagcatggcg agccactggt cgagagccgc tacctctacg acccgctgag ccgccggacg
    22141 gggaaacggg tgtggcgtcg cgagcgtgac ctgacggggt ggatgtcgct gtcgcgtaaa
    22201 ccggaggtga cgtggtacgg atgggacggc gaccggctga cgacggtaca gaccgacacc
    22261 acgcgtatcc agacggtata ccagccgggg agcttcgcgc cgctcatccg catcgaaaca
    22321 gacaacggtg aacgggagaa agcgcagtgc cgcagcctgg cggagaagtt acagcaggaa
    22381 gggagcgaag acggtcacgg tgtggtgttc ccggctgaac tggtggggct gctggacagg
    22441 ctggaggggg aaatccgggc aaactgcgtg agcagtgaaa gccgccagtg gcttgcgcag
    22501 tgcgggctga cggtggagcg gctggcggca cagatagagc cggtttattt gcctgagcga
    22561 aaaatacatc tttatcactg tgaccaccgg ggcctgccgc tggcgcttat cagtgaagac
    22621 ggcaatacgg cgtggagcgc ggaatatgat gaatggggca accagcttaa tgaggagaac
    22681 ccgcatcacc tgcaccagcc gtaccggctg ccggggcagc agtatgataa ggagtcgggg
    22741 ctgtactaca accggaaccg gtactacgat ccgttgcagg ggcggtatat cactcaggac
    22801 ccgatagggc tggagggggg atggagtctg tatgcgtatc cgctgaatcc ggtgaatggt
    22861 attgatccat tagggttaag tcccgcagat gtagcgctaa taagaagaaa agatcaacta
    22921 aaccatcaaa
//
LOCUS       DADMIB010000057        22617 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.057, whole genome shotgun sequence.
ACCESSION   DADMIB010000057 DADMIB010000000
VERSION     DADMIB010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22617
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.057"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(50..1699)
                     /gene="actP"
                     /locus_tag="JNZ89_002051"
     CDS             complement(50..1699)
                     /gene="actP"
                     /locus_tag="JNZ89_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation/acetate symporter ActP"
                     /protein_id="HAY8935938.1"
                     /translation="MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVV
                     FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
                     GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
                     YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
                     ASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTA
                     GLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAG
                     HLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVF
                     KKGATEREELRVSKITVLILGVIAIILGMLFENQNIAFMVGLAFAIAASCNFPIILLS
                     MYWSKLTTRGTMLGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSISVAF
                     LGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH"
     gene            complement(1696..2010)
                     /locus_tag="JNZ89_002052"
     CDS             complement(1696..2010)
                     /locus_tag="JNZ89_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HAY8935939.1"
                     /translation="MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLI
                     AFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ
                     AS"
     gene            complement(2142..4101)
                     /gene="acs"
                     /locus_tag="JNZ89_002053"
                     /pseudo
     CDS             complement(2142..4101)
                     /gene="acs"
                     /locus_tag="JNZ89_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006816721.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
     gene            4494..5930
                     /gene="nrfA"
                     /locus_tag="JNZ89_002054"
     CDS             4494..5930
                     /gene="nrfA"
                     /locus_tag="JNZ89_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HAY8935940.1"
                     /translation="MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNET
                     FAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVR
                     ETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGC
                     ADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYF
                     DGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHG
                     KNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQ
                     SINDLKIKVEDQLVHAHFEAKAALDAGATEAEMKPIQDDIRHAQWRWDLAIASHGIHM
                     HAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQ
                     IKAEKQDFIKTVIPQWEEQARKNGLLSQ"
     gene            5975..6541
                     /gene="nrfB"
                     /locus_tag="JNZ89_002055"
     CDS             5975..6541
                     /gene="nrfB"
                     /locus_tag="JNZ89_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418495.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HAY8935941.1"
                     /translation="MSVLRSLLTARVLASGLLWSLNGITATPAAQASGDRYEVTQQRN
                     PDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEP
                     MYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRI
                     KICVDCHSDQRTNPNFNPASVPLLKEQP"
     gene            6538..7209
                     /gene="nrfC"
                     /locus_tag="JNZ89_002056"
     CDS             6538..7209
                     /gene="nrfC"
                     /locus_tag="JNZ89_002056"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HAY8935942.1"
                     /translation="MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDES
                     LCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVD
                     VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
                     QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKY
                     GEVSQ"
     gene            7206..8162
                     /gene="nrfD"
                     /locus_tag="JNZ89_002057"
     CDS             7206..8162
                     /gene="nrfD"
                     /locus_tag="JNZ89_002057"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HAY8935943.1"
                     /translation="MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQ
                     AGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQ
                     LYMVVLVLWLAKIFEHDLLAQQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLG
                     AYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAHFVH
                     RMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPM
                     LLKSWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA"
     gene            8182..9900
                     /locus_tag="JNZ89_002058"
     CDS             8182..9900
                     /locus_tag="JNZ89_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014640253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HAY8935944.1"
                     /translation="MDVFLPEVGFLALLLSLGVNVLTPLTAFAGVRLRWPAMMRLTCI
                     GILAQCALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLW
                     VLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEG
                     RDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDAASARICWRWALPGW
                     SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFRH
                     WSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGW
                     RARDGGPAVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPY
                     FNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGIVVSSVSRQEISLN
                     LQPGQQVTLAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELMPERRFYEARRQ
                     QMMEPSIRWNGIHDWYVVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWR
                     GRKRDE"
     gene            9893..10276
                     /gene="nrfF"
                     /locus_tag="JNZ89_002059"
     CDS             9893..10276
                     /gene="nrfF"
                     /locus_tag="JNZ89_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HAY8935945.1"
                     /translation="MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRC
                     PQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQT
                     LVLWALPVVLLLLMALILWRVRAKR"
     gene            10273..10869
                     /gene="nrfG"
                     /locus_tag="JNZ89_002060"
     CDS             10273..10869
                     /gene="nrfG"
                     /locus_tag="JNZ89_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfG"
                     /protein_id="HAY8935946.1"
                     /translation="MKEPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVHAEYQRQRD
                     PLHQFASQQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQL
                     RGENAELYVALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANY
                     AQAIELWQKVMDLNSPRINRTQLVESINMAKLLQRRSD"
     gene            11210..12523
                     /gene="gltP"
                     /locus_tag="JNZ89_002061"
     CDS             11210..12523
                     /gene="gltP"
                     /locus_tag="JNZ89_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate:proton symporter GltP"
                     /protein_id="HAY8935947.1"
                     /translation="MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPA
                     GDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITL
                     ANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEM
                     LPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVT
                     VANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYS
                     TASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGID
                     LSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMA
                     RTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ"
     gene            complement(12714..12968)
                     /locus_tag="JNZ89_002062"
                     /pseudo
     CDS             complement(12714..12968)
                     /locus_tag="JNZ89_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005118502.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
     gene            complement(12953..13402)
                     /locus_tag="JNZ89_002063"
     CDS             complement(12953..13402)
                     /locus_tag="JNZ89_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005045755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY8935948.1"
                     /translation="MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADS
                     WFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPGSLDYPQAKVLAEKAAQAGSK
                     EGEVTLAHILVNTQAGKPDYPKAISLLEKPRKIWRTTLPSMPKCCLV"
     gene            complement(13496..15643)
                     /gene="fdhF"
                     /locus_tag="JNZ89_002064"
     CDS             complement(13496..15643)
                     /gene="fdhF"
                     /locus_tag="JNZ89_002064"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(15224..15226),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HAY8935949.1"
                     /translation="MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLK
                     GYYGWDFINDTQILTPRLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDA
                     IQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNA
                     INEIDNTDLVFVFGYNPADSHPIMANHVINAKRNGAKIIVCDPRKIETARIADMHIAL
                     KNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSAS
                     EIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRG
                     QNNVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAH
                     GEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGE
                     HEGVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHL
                     CPDFYGATYEKMGEQGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPI
                     DKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEA
                     LVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGACNELVTENLSPITKTPEYKYCA
                     VRVEPIADQRAAEQYVIDEYNKLKTRLREAALA"
     gene            complement(15841..17307)
                     /gene="mdtP"
                     /locus_tag="JNZ89_002065"
     CDS             complement(15841..17307)
                     /gene="mdtP"
                     /locus_tag="JNZ89_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MdtP"
                     /protein_id="HAY8935950.1"
                     /translation="MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKL
                     ADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDA
                     GSQLQVAALGMLNRQRVSANGFLSPYAMDAPSLGMDGPYYTEATVGLFAGLDLDLWGV
                     HRSAVAAAIGAHNAALAETAAVELSLTTGIAQLYYSMQASYQMLDLLEQTRDVIDYAV
                     KAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITETRESLRALIGAGASDMPE
                     IKPVALPRVQTGIPATLSYELLARRPDLQAMRWYVQASLDQVDSARALFYPSFDIKAF
                     FGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIERYNQSVL
                     NAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAAYQRGLTSRLQATEARLPV
                     LAEEMSLLMLDSRRVIHSIQLMKSLGGGYQAAPVVEKK"
     gene            complement(17304..19355)
                     /gene="mdtO"
                     /locus_tag="JNZ89_002066"
     CDS             complement(17304..19355)
                     /gene="mdtO"
                     /locus_tag="JNZ89_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter permease subunit
                     MdtO"
                     /protein_id="HAY8935951.1"
                     /translation="MSALNSLPLPVVRLLAFFHEELSERRPGRVPQIVQLWVGCLLVI
                     LISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEP
                     LIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCI
                     VVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREAL
                     ALQKLNVFCLADDANWRTQSAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKL
                     ASEINKLQHAVAEGQCWQSDWRISESEAVAARECNLENICQTLLQLGQMNPNTPPTPA
                     AKPPSMVADAFTNPDYIRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVG
                     SSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERS
                     SYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEART
                     LPQKLAGALGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLD
                     SEERALLIERSQTVIRQGRDLLHAWDATWNSAQALDNALQPDRAGQFADALEKYAAGL
                     ATALSCSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGAT
                     Q"
     gene            complement(19355..20386)
                     /gene="mdtN"
                     /locus_tag="JNZ89_002067"
     CDS             complement(19355..20386)
                     /gene="mdtN"
                     /locus_tag="JNZ89_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter periplasmic adaptor
                     subunit MdtN"
                     /protein_id="HAY8935952.1"
                     /translation="MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYA
                     SADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQI
                     MLTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTA
                     QRAAEADLNAVLLQAQSAASAVSGVDVLVAQRAAVEADIALTKLHLEMATVRAPFDGR
                     VISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKT
                     FEGKVDSIGYGVLPNDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGA
                     SAVANLEPQ"
     gene            complement(20405..20680)
                     /locus_tag="JNZ89_002068"
     CDS             complement(20405..20680)
                     /locus_tag="JNZ89_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935953.1"
                     /translation="MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWF
                     FCAIASLILTLITRRIIQRANINLAFVGIIYTALFAVYAMLFWLAFF"
     gene            complement(20889..>22617)
                     /gene="yjcS"
                     /locus_tag="JNZ89_002069"
     CDS             complement(20889..>22617)
                     /gene="yjcS"
                     /locus_tag="JNZ89_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alkyl sulfatase YjcS"
                     /protein_id="HAY8935954.1"
                     /translation="GEDYKFDINAPAPETVNPSLWRQSQLNGISGLFKVTDRMYQVRG
                     QDISNITFIEGDTGIIVIDPLVTPPSAKAALDLYFQNRPQKPIVAVIYTHSHTDHYGG
                     VKGIISEADVKSGKVQVIAPAGFMDEAISENVLAGNIMSHRALYSYGLLLAHNPQGNI
                     GNGLGVTLASGYPSIIAPNKTITKTGEKMIIDGLEFDFLMTPGSEAPAEMHFYIPALK
                     ALCTAENATHTLHNFYTLRGAKTRDTSKWTEYLNETLDMWGNDAEVLFMPHTWPVRGN
                     KHINDYIGKYRDTIKYIHDQTLHLANQGYTMNEIGDMIKLPPALANNWASRGYYGSVS
                     HNARAVYNFYLGYYDGNPANLHPYGQVEMGKRYVQALGGSARVISLAQEANKQGDYRW
                     SAELLKQVIAANPGDQVAKNLQANNFEQLGYQAESATWRGFYLTGAKELREGVHKFSH
                     GTTGSPDTIRGMSVEMLFDFMSVRLDSAKAAGKNISLNFNMSNGDNLNLTLNDSVLNY
                     RKTLQPQADASFYISREDLHAVLTGQAKMADLVKAKKAKIIGNGAKLEEIIACLDNFD
                     LWVNIVTPN"
BASE COUNT         5074 a         5960 c         6194 g         5389 t
ORIGIN      
        1 ctggagagga agagtattcc ccggtcaggc gaccggggaa ggggagagat taatgtgcgc
       61 ggccttgctc aacgccaaag ccggtctggg agcggataaa ctgcgcacgg aacagttcac
      121 gctcgcgcgc accttccgct gagttatcgg ttgccgagaa gaaccagatg ccgaggaatg
      181 ccacgctgat agagaacagc gccgggtatt catacgggaa gatggctttt tcgtgaccga
      241 ggatctgtac ccaaatagtc gggccgagga tcatcagcac cactgcggta atcaacccca
      301 gccagccgcc cagcatcgtg ccacgggtag tcagtttcga ccagtacatg gaaagcagaa
      361 tgatcgggaa gttacagctc gccgcgatgg caaacgcaag gcctaccata aaggcgatgt
      421 tctgattctc aaacagcatg ccgaggataa tcgcaatcac acccaaaatc aggacggtga
      481 ttttcgatac ccgcagttct tcacgttcgg tcgcaccttt tttgaagacg ttagcgtaca
      541 agtcatgcga aaccgcggat gcgcccgcca gcgtcagacc cgcaaccacc gcgaggatag
      601 tggcgaaagc aaccgctgaa ataaaaccga ggaacaggtt gccgcccact gcattcgcca
      661 ggtgaacggc cgccatgttg ttaccaccaa tcagatggcc cgccgcgtct ttatattccg
      721 gattcgcacc aaccagcatg atcgcgccga agccgataat aaaggtcaga atatagaagt
      781 agcccataaa cccggtggcg tagaacacgc tcttacgtgc ttcgcgggca tcgctgactg
      841 taaagaagcg catcagaatg tgcggcaagc ccgccgtacc aaacatcagt cccagaccca
      901 gagagagcgc ggagatcgga tctttcacca gcccgcccgg cttcatgatg tcgacacctt
      961 tcgggtgtac cgccatcgct tcgctgaaca gattattgaa gctaaagccg acgtgtttca
     1021 tcaccataaa ggccataaag ctggcaccga acagcaacag cacggcttta ataatttgca
     1081 cccaggtggt cgccagcatg ccgccgaaca ggacgtacat catcatcagc acgccgacca
     1141 gcaccaccgc aatgtgatag ttaaggccaa acagcagctc gatcagttta cctgcgccta
     1201 ccatctgggc gataaggtaa agcgccacca ccaccagaga accacaggcc gaaagaatac
     1261 gaatcggccc ttgtttcagg cggtaagagg ctacatcggc aaaggtgtag cgtcccaggt
     1321 tacgcagacg ttcggcaatc aggaacaaaa tgatcggcca gcccaccagg aagcccagcg
     1381 agtaaattaa gccgtcatag ccggaggtaa acaccagcgc ggagatcccc aaaaatgagg
     1441 cggcggacat atagtcaccg gcaatcgcca gcccgttctg gaagcctgtg atattgccgc
     1501 ctgccgtgta gtagtcgcta cgagaacgta cgcgttttga tgcccagtag gtaatgccga
     1561 gcgtaaacac gacgaaaatc aggaacataa taatcgcctg ccagttcgtt ggctggcgct
     1621 ctacggcccc gctaatagca tccgcggcgt tagctgcgaa agggagtgtg gcggcaagcg
     1681 ccgtcagaac tcttttcatg atgcttgtac ctcatgcagg acttcattat taagacggtc
     1741 gaattcgccg ttcgcccgcc agatgtagat accggtgaga acaaaggaga tcacaatcac
     1801 tccaacacca attggaatac cgcgtgtgac gctggtgttc ggattcagcg gcgtgcccag
     1861 ccagccgggc gcgaaggcga tcagtaaaat aaagccgata taaactgcca gcataataat
     1921 cgacaggatg gtggcaaacc gttgccgttt ttcgactaac tccctgaaat gcgcattgtc
     1981 ttctatccgc tgataaatag tgccattcat cacagattct ccagaggtaa tgtagggatt
     2041 gttttaattc ccgctccctt atgggagaag gttaacgctc gggtaaccct tgccgaatgt
     2101 aggccggata aggcgtttac gccgcatccg gcaattgtgg gttacgatgg catcgcgata
     2161 gcctgcttct cttcaagcag cttctcgact acgccaggat cggcaagcgt cgaggtatcg
     2221 cccaggttgc tggtatcgcc cgccgcaatt ttgcgcagaa tacggcgcat aattttgccg
     2281 gagcgggttt taggcaggga gtcggtccag tgcagcacgt ctggcgtcgc cagcgggcca
     2341 atctctttac gcacccagtt gcggacttct gcgtacagtt ctggtgacgg ttcctccccg
     2401 tgattaagcg tgacgtaggc gtagatcgcc tgacctttaa tattgtgcgg aatacctact
     2461 acggcggctt cggcaatctt cggatgcgcc accagcgccg actcaatctc tgccgtcccc
     2521 agacggtgac cggagacgtt cagcacgtcg tccacatgcc cggtgatcca gtaatagcca
     2581 tcttcatcgc gacgcgcgcc gtcgccgctg aaatacatat ttttgaaggt ggagaagtag
     2641 gtctgttcaa aacgttcgtg atcgccaaac agcgtacgcg cctgacccgg ccaggagtcg
     2701 gtgatcacca ggctgccttc ggtagcgcct tccagcgggt taccttcgtt atcgaccagc
     2761 gccggttgca cgccgaagaa cggacgtgtt gccgaaccgg ctttcagccc ggtagcgcca
     2821 ggcagtggcg tgatcatgaa accgccagtt tcggtctgcc accaggtatc gaccaccgga
     2881 catttctcgt tgccgatttt tttccagtac cactcccacg cttccgggtt aattggctcg
     2941 cccacggaac cgagaatgcg cagcgacgaa cggtcggtac cctcgatcgc tttatcgcct
     3001 tccgccatca gcgcgcggat cgccgtgggt gcggtataga gaatattgac ctgatgcttg
     3061 tccaccacct gcgccatacg ggcaggcgtc ggccagttgg gtacgccttc aaacatcagc
     3121 gtggtcgcac cgcaggccag cgggccgtac agcaagtaac tgtgtccggt cacccagccc
     3181 acatcggcgg tgcaccagta gatatcaccc ggatgataat caaagacata tttaaaggtc
     3241 agcgccgcgt acaccagata accgccggta gtatgcagca caccttttgg cttaccggta
     3301 gaaccggagg tgtagagaat aaacagcgga tcttcggcgt tcatctcttc cgcctggtgc
     3361 tgatcgctcg cttgctcaac caggtcgtgc caccacaggt cgcgcccttc ctgccagtca
     3421 attttcccgc cagtacgctt cagtaccacc acatgctcta cgctggtgac gttcgggttt
     3481 ttcagcgcgt catcaacgtt tttcttcagc ggaatactgc cgcccggcac gcacaccttc
     3541 gtcggaagtg atcaccagtc gtgagttgga atcaataatg cgcccggcaa cggcttccgg
     3601 cgagaagccg ccgaaaatca ccgaatgcac cgcgccaatg cgggcgcagg ccagcatcgc
     3661 aaccgcggct tccggcacca tcggcatata aatcgccacc acatcacctt ttttaatgcc
     3721 cagctcgagc agggtattgg cgaagcggca gacgtcgcgg tgcagctctt tatagctgat
     3781 atgtttgctc tggctggcgt cgtcgccttc ccagatgatg gcggtacgat cgccgttttc
     3841 ttgcagatgg cggtcaaggc agtttgccgc cagattcagc gtgccgtcct cgtaccattt
     3901 aatggacaca ttaccggggg caaaggaggt gtttttcacc ttctggtaag gtttgatcca
     3961 gtcaagaatt tttccctgtt cgccccagaa ggtatcaggt acgttaatag attgttgata
     4021 cattgcctcg tactgctgag ggtttatcag gcaacggtct gcgatgttgg caggaatggt
     4081 gtgtttgtga atttggctca tgcttttgtt ctccttgtag aatgttaata atatgtgaca
     4141 taagcgttaa atgtaggggt attggcagtt ttgtttagta tttgggcgac agatcacgca
     4201 aaagtagaat tgtgcaaata aacggcaggg taatttttga aggtcagcaa caaaagttga
     4261 ttaattcttt gaggaacatg cagttatgca tgctgttgaa aaagaggaag atactgacta
     4321 actctaaagt ggtattttac atgcacttac aattgattaa agacaacatt cacagtgtgg
     4381 ttatttgtta cacatagggg cgagcaatgt catgacagtg taggtgcggt tactgtcgtg
     4441 aaaaacaata aaaaccgcca ttgcaacaat ggcgcaattc ggatgaagcc cctatgacaa
     4501 ggataaaaat aaacgcacgc cgtatcttca gcttattgat tccttttttc tttttcactt
     4561 ctgttcacgc tgaacaaacg gcagctcccg caaaacctgt aactgtggaa gcgaagaatg
     4621 aaacctttgc cccgcagcat cccgatcaat atctctcctg gaaagccacc tcggaacagt
     4681 cagagcgtgt tgacgccctg gcggaagatc cacggctggt gatcctgtgg gcggggtatc
     4741 ccttctcgcg cgattacaac aagccgcgtg gacatgcctt tgctgtgacc gatgtgcgtg
     4801 aaaccctgcg taccggtgcg ccgaaaaatg ctgaagatgg tccgctaccg atggcgtgct
     4861 ggagttgtaa aagcccggat gtggcgcgtc tgatccagaa agacggcgaa gatggctact
     4921 tccacggtaa gtgggcgcgc ggcggcccgg aaatcgtcaa caacttaggt tgtgccgact
     4981 gccataacac cgcctcacca gagttcgcca aaggcaaacc ggagttaacc ctttcccgtc
     5041 cgtatgcggc tcgcgcgatg gaagccattg gtaaaccttt tgagaaagcc ggacgtttcg
     5101 accagcaatc gatggtttgc ggtcagtgcc atgtggagta ttacttcgac ggcaaaaaca
     5161 aagcggttaa attcccgtgg gatgacggca tgaaagtcga aaatatggag cagtattacg
     5221 acaaaattgc cttctctgac tggactaact ccctgtcgaa aacgccaatg ctgaaagcgc
     5281 agcacccgga atatgaaacc tggacagcgg gcattcacgg taaaaacaac gtgacctgta
     5341 tcgactgcca tatgccaaaa gtgcagaacg ccgaaggcaa actctacacc gaccataaaa
     5401 ttggtaatcc gtttgataac ttcgcccaga cttgtgcgaa ctgccatacc caggacaaag
     5461 ctgccttgca aaaagtggtc gcggaacgta agcagtcgat taacgacctg aaaatcaagg
     5521 ttgaagatca actggttcac gctcacttcg aagcgaaagc agcgctggat gcaggcgcga
     5581 cggaagctga aatgaagcca attcaggacg atatccgtca tgcccagtgg cgctgggatc
     5641 tggcgatcgc ttcccacggc attcatatgc acgcaccgga agaaggttta cggatgctcg
     5701 gtacggcgat ggataaagcg gcggatgcac gcaccaaact ggcgcgcctg ctggcgacca
     5761 aaggcatcac ccatgaaatc cagatcccgg atatctcaac caaagagaaa gcccagcagg
     5821 ccattggcct gaacatggaa caaatcaagg ccgagaagca ggacttcatc aaaacggtga
     5881 tcccgcagtg ggaagaacag gcacgtaaaa acggtctgtt aagccaataa ccccgttccg
     5941 cctcgcaagg ggcggaaaac acaatggagt gaatatgagc gtattacgtt cgttattaac
     6001 tgctagggtg ctggcgtcgg gcctgttgtg gagcctgaac ggaattaccg ctacccctgc
     6061 ggcgcaggca tctggtgatc gctacgaagt tacccagcag cgtaacccgg atgccgcctg
     6121 tctggactgt cataaaccag ataccgaagg tatgcatggc aaacatgctt ccgttatcaa
     6181 cccgaataac aaattgccgg tcacctgcac caactgtcac ggccagccat caccgcaaca
     6241 ccgcgaaggg gtgaaagatg tgatgcgctt taacgagccg atgtacaagg tcggagagca
     6301 gaacagcgtc tgtatgtcct gtcatctgcc ggaacagttg caaaaagcgt tctggccgca
     6361 cgatgtccac gtaaccaaag tggcgtgcgc cagctgccat tccctgcatc cacagcaaga
     6421 tacgatgcag acgttaagtg acaaaggacg gattaagatt tgcgtcgatt gccacagcga
     6481 tcagcgcacc aatccgaact ttaacccggc gtctgttccg ttgcttaagg agcagccatg
     6541 acctggtctc gtcgccagtt tctcaccggc gtcggcgtgc tggcagccgt cagcggcacc
     6601 gcagggcgcg tggtggcgaa aacgttgaat atcaatgggg tgcgttacgg catggtgcat
     6661 gacgagtcgt tatgcatcgg ctgtaccgcc tgtatggatg cttgtcgaga agtgaacaag
     6721 gtgccggaag gcgtctcgcg cctgacgatt attcgtagcg agccgcaggg cgaatttcct
     6781 gatgtgaaat atcgcttctt ccgtaagtct tgccagcact gcgatcatgc gccgtgcgtt
     6841 gacgtctgcc cgaccggtgc gtcttttcgt gatgccgcta gcgggattgt cgatgttaat
     6901 cctgatctct gcgtcggttg tcagtactgc atcgccgcct gtccgtaccg cgtgcgcttt
     6961 atccatccgg tcacgaagac ggcggacaaa tgcgatttct gccgtaaaac caatttgcag
     7021 gccggtaagc tgcccgcgtg cgttgaggct tgcccgacga aggcgctgac gtttggcaat
     7081 ctggacgatc ctaacagtga gatttcgcaa ctgctgcgcc agaagcctac ttaccgctac
     7141 aagctggcgc tgggaaccaa accgaagctg taccgcgtac cgtttaaata cggggaggtg
     7201 agccaatgac gcagacttcc gcatttcatt ttgaatcgct ggtgtgggac tggccgattg
     7261 ccatctacct gtttttgatt ggtatttctg ccggtctggt gacgctggcc gtgctgttac
     7321 gtcgcttcta cccgcaggcg ggcggtgcag acagtacgtt gctgcgcacc acgctgattg
     7381 tcgggccggg cgcggtgatc ctcggtctgt tgatcctcgt cttccacctg acaagaccgt
     7441 ggaccttctg gaagctgatg ttccactaca gttttacctc ggtgatgtcg atgggggtga
     7501 tgctgtttca gctttacatg gtggtgctgg tgctgtggct ggcgaaaatc tttgaacatg
     7561 atttgcttgc ccagcaacaa cgctggttgc cgaagctggg gatcgtgcaa aaggttctga
     7621 gcctgctgac gcccgttcat cgcggactgg aaacgctgat gctggtgttg gcggtgctgc
     7681 tgggggctta taccggcttt ctgctgtcgg cgctgaaatc gtatccgttc ctcaataacc
     7741 cgatcctgcc ggtgctgttc ctcttctccg gcatctcgtc cggtgcggcg gtggcgctga
     7801 tcgccatggc gatacgccaa cgcagtaacc cgcattccac ggaagcgcac tttgttcacc
     7861 ggatggaaat ccccgtggta tggggtgaaa tcttcctgct ggtggcgttt tttgtcggtc
     7921 tggcgctggg cgatgacggt aaagttcgtg cgctggtggc ggcattaggt ggcggtttct
     7981 ggacgtggtg gttctggctt ggtgtcgccg ggctggggct gattgtgcca atgttgctca
     8041 aatcgtgggt caatcgcagt tccggcattc ctgccgtgct ggcggcgtgt ggggccagtc
     8101 tggtcggcgt gttgatgctg cgctttttca ttctctacgc cggacagttg acggtggcgt
     8161 aagccagaaa agaggtggtt tctggacgta ttccttcctg aagtcggttt tctggcgttg
     8221 ttgttaagtc tcggggtcaa cgtgttgacc ccgttgacgg cctttgcggg agtgcggttg
     8281 cgctggcctg ccatgatgcg actcacttgc atcggcattc tggcgcagtg cgcgctcctg
     8341 ctgctcgcct ttggcgtact gacgtattgt tttctcatca gcgatttctc ggtcatttat
     8401 gtcgcccaac atagctacag cctgctgtcg tgggaactca aactggcggc ggtgtggggc
     8461 ggtcatgaag gttcgctgct gctttgggtg ctgctgcttt ccgcctggag cgcgctgttt
     8521 gcctggcatt atcggcagca aaccgatccg ctatttccgc tgacgctagc cgttttatct
     8581 ctcatgctcg ccgcactgct actgtttgtg gtgctgtggt ccgatccctt cgtgcggata
     8641 tttccaccag caatcgaagg ccgcgatctc aatccgatgc tgcaacatcc cggtcttatc
     8701 tttcatccac cgctgcttta ccttggctat ggcggtttga tggtagcggc gagcgtggcg
     8761 ctggcgagtc tactgcgcgg cgagtttgat gcggccagcg cccgaatttg ctggcgctgg
     8821 gcgttacctg gctggagtgc attaacggcg gggatcatcc tcggttcctg gtgggcctac
     8881 tgcgaactcg gctggggcgg ctggtggttc tgggatccgg tggaaaatgc ctctttatta
     8941 ccctggcttt ctgccactgc gctgctgcac agtttatccc tgacacgcca gcgggggatt
     9001 tttcgccact ggtcgctgtt actggcgata gttactctga tgctgtcgct gctgggcacc
     9061 ttaattgtcc gttctggcat tctggtttcg gttcatgcgt tcgcgctgga taacgtccgc
     9121 gccgtgccgt tgttcagcct gtttgcactg attagccttg cgtctctggc tctgtatggc
     9181 tggcgagcgc gggacggtgg cccggcggtg cgtttttcgg ggttatcgcg ggaaatgtta
     9241 atcctcgcta cgctgttgct gttttgcgca gtgctactga tcgtgctggt gggaacgctt
     9301 tatccgatga tttacggtct gctgggctgg ggacgcctct ccgttggcgc gccgtatttt
     9361 aaccgcgcga cgttaccgtt tggtctgttg atgctggtgg tgattgtgct ggcgacgttt
     9421 gtctctggca aacgcgtgca gcttccggcg ctggtagctc atgcgggcgt gctgttattt
     9481 gccgctggga tcgtggtttc cagcgtcagc cgtcaggaga tcagcctgaa tttacagccg
     9541 ggtcagcagg tgacgctggc aggatacacc ttccgttttg agcgcctcga tctgcaagcc
     9601 aaaggcaatt acaccagcga aaaagcgata gtggcactgt ttgaccatca gcaacgcatt
     9661 ggtgaactga tgccggagcg gcgtttttac gaagcacgtc gtcagcaaat gatggaaccg
     9721 tcaattcgct ggaacggcat ccatgactgg tatgtggtca tgggtgaaaa aaccggagcg
     9781 gatcgttacg cttttcgctt gtatgtacaa agcggtgtgc gctggatctg ggggggagga
     9841 ttgttgatga ttgcgggcgc attgttaagc ggatggcggg ggaggaagcg cgatgaataa
     9901 aggacttctc acgctactgc tgttatttac ctgttttgcg cgcgctcagg tcgtagacac
     9961 ctggcaattc gccaatccgc aacaacagca acaggcgtta aatattgcca gccagttacg
    10021 ttgtccgcag tgccagaatc aaaacttact ggaatccaac gcgccggtgg cagtcagtat
    10081 gcgccatcag gtttacagca tggtggcgga ggggaagaac gaagtcgaaa tcattggctg
    10141 gatgaccgaa cgctacggag attttgttcg ctataaccca ccgttaacgg gtcagacgct
    10201 ggtgttgtgg gcgctgccag tggtgttgtt actgctgatg gcactgatcc tctggcgagt
    10261 gagggcgaag cgatgaaaga gcccaaaata ccggtgaaaa tgctgacaac actcacgatt
    10321 ttgatggtat ttctctgtgt cggcagttat ctgttaagtc caaaatggca ggcggtacat
    10381 gcggaatatc agcgtcagcg cgatccgcta catcagtttg ccagccagca aaccccggaa
    10441 gcgcagcttc aggcattgca ggataaaatc cgcgctaatc cacaaaacag cgaacaatgg
    10501 gcgttactgg gcgagtacta tctgtggcaa aacgattaca gcaattcgct gctggcgtac
    10561 cgtcaggcgt tgcaactacg tggtgagaac gctgaactgt atgtggcgct ggcgacggtg
    10621 ctttattacc aggccagcca gcatatgacc gcccagactc gcgcaatgat cgacaaagcc
    10681 ctcgcgctgg actctaacga aatcaccgct ctgatgctgc tggcttccga tgcgtttatg
    10741 caggcgaatt acgcgcaagc catcgaacta tggcaaaaag tgatggatct caactcaccc
    10801 cggatcaacc ggacacagct ggtcgagtcg attaatatgg cgaaattgtt gcagcggaga
    10861 tcggattaat catctggtga tgaagattat gttattgagc tgcataaaaa ataatcgaat
    10921 gaacatatgc caaaaataat cactaatcag tattattgca gattaaacaa ataaaaatct
    10981 ttccataaca aatggttatt cattaatcct gacataaact cgcgttatta tgcattaatg
    11041 cagcgaaaag ctctgttgtt aaagggttgc gcaacatacc gcgcaaatga tactgatcat
    11101 aagcgttaaa aaaatctaca aaccaacgca acacaattca tgcctggcag tatgtcacgt
    11161 tctcgcgttt ctgaacgggg aacggcgctc cattgaggaa gttattctga tgaaaaatat
    11221 aaaattcagc ctggcctggc agattctgtt tgctatggtg ctgggcattc tcctgggaag
    11281 ctacctgcac taccatagcg acagccgcga ctggctggtc gtcaatttgc tctctccggc
    11341 gggtgatatc ttcatccatc tgattaaaat gattgttgtg ccgattgtga tctccacgct
    11401 ggtggtgggt atcgcgggtg tgggtgatgc caaacagctc gggcgtattg gcgcgaaaac
    11461 cattatttac ttcgaggtga tcaccaccgt cgccatcatt ttggggatca ctctggcgaa
    11521 cgtcttccag cccggtgccg gggtggatat gtcgcagctg gcgaccgtcg atatctcgaa
    11581 atatcagagc actacggaag cggtacaaag cagttcccac ggcattatgg gcacgatttt
    11641 gtcgctggtg ccgacgaaca ttgtggcgtc gatggcgaaa ggcgaaatgc tgccgatcat
    11701 cttcttctcg gtgctgtttg gtctggggct ttcctccctg cccgcgacgc atcgtgaacc
    11761 gctggtgacc gtgttccgct ccatctctga aaccatgttt aaagtgactc acatggtgat
    11821 gcgttatgca ccggtgggtg tgtttgcgct gattgcggtg acggtggcta actttggttt
    11881 ctcttctctg tggccactgg cgaaactggt gctgctggtg catttcgcca ttctgttctt
    11941 cgcgctggta gtgctgggaa ttgtggcgcg cctgtgcggg ttaagcgtct ggatcctgat
    12001 tcgtattctg aaagatgagc tgattctggc gtactccact gccagctctg aaagcgtact
    12061 gccgcgaatt attgagaaga tggaagccta cggagcaccg gcgtcgatca ccagcttcgt
    12121 ggtgccgacc ggttactctt ttaaccttga tggttcgacg ctgtatcaaa gtattgccgc
    12181 tattttcatc gctcagctgt atggcattga cctgtccatc tggcaggaaa tcattctggt
    12241 gctgacgctg atggtgacct cgaaggggat tgctggcgtg ccgggcgtgt cgtttgtggt
    12301 gttgctggca acgctgggta gcgtaggtat tccgctggaa ggtctggcgt ttattgctgg
    12361 tgttgaccgt atcctcgaca tggcgcgtac tgcgctgaac gtggtgggta atgcgctggc
    12421 ggtgctggtg attgccaagt gggaacacaa atttgaccgc aaaaaggcgc tggcttatga
    12481 gcgtgaagtg ctgggcaaat ttgataaaac tgcggatcaa taattgaaga ttgccggggt
    12541 tatccacccg gcaatgtgtg gatgcctgat gcgacgctgg tgcgtcttat caggcctacg
    12601 ccagacagcg caatagcctg atttagcgtg attttgtagg tcggataagg cgtttacgcc
    12661 gcatccgaca tcaacgcctg atgcgacgct taacgcgtct tatcaggcct accttaaccg
    12721 ttggttaatt tttcaaactc ttcacacccg gtatcaaacc cttccataca gctcaggttc
    12781 aaccagtgca gcgccttttg tttgttcttc tcgataaaac cttcttcacc gtttaagaac
    12841 atcattcccg cccagtactc ggaataaccg gttcgggaaa ttgcagagct gcgtttgaaa
    12901 tactaggttg ccttgtcatc gtcggcctta atacccacgc cgttggcgta aatcaaacca
    12961 agcagcattt gggcatcgac ggcagagtcg ttctccagat cttccgaggc ttttctaaca
    13021 gcgaaatcgc ctttggataa tccggtttac ccgcttgagt atttaccaga atatgcgcca
    13081 gcgttacttc accttcttta ctgcccgctt gcgccgcttt ctctgcaaga acttttgctt
    13141 gtggatagtc cagactgccc ggattggtga ttttgatctg cgccaacagc gcgcaggcat
    13201 cagcatcacc gctgtcggcg gctttctgtg cccaatattc ggctttgctc aaatcgccgg
    13261 agctaaacca gctgtcggca agaaaatatt gtgcgcgtcg gtccccggcc tctgctgcct
    13321 ttaaatactg gctgccaggc tcggagtcgt tggcgtgggc aaagaatgtc aaaaacaaca
    13381 tcaatgcgat aatttttttc attttgataa tacgattggg tagggagtaa ccagtataaa
    13441 gagttcgaat ggataaaaaa acagcctccg aaaggaggct gtagaaagga ctgtattacg
    13501 ccagtgccgc ttcgcgcagg cgagttttca acttgttgta ctcgtcaatc acgtactgct
    13561 cggcggcgcg ctgatcggcg atcggctcga cgcgcacggc gcagtatttg tattccggcg
    13621 ttttcgtaat cgggcttaag ttttcggtaa ccagctcgtt acaggcacca atccaccact
    13681 ggtaggtcat gtaaatcgcc cctttgttcg gacgatcgct gacctgcgca cgggtgataa
    13741 ttttgccttt acgcgagtgc acccaaacca atgcctcatc ttcaataccc agacgtttgg
    13801 cgtcttcggt attgatttgt gcgtagccag gttcatcagc cagcgccgcc agtgccgcac
    13861 agttaccggt catcgaacgg caagagtagt gaccaacttc acgcaccgtt gacagtacca
    13921 tcgggtactc gtcggtgagt ttgtcgattg gcgctaccca gtcgcaggtg aagaactgcg
    13981 ccagaccgtt cggggtatca aacttctctt taaacagata agaagtcccc tgatcggcat
    14041 ctgaagtatc gcggcaaggc cactgaatga agccctgttc gcccattttc tcgtaagtcg
    14101 caccgtagaa atccgggcac agatgacgca actcatccca gatctcctgg gtgttgttgt
    14161 agtgcatcgg ataacccata cgggtggcga tttcactgat gatttgccag tccgttttca
    14221 gatcccattt cggttcaact gctttgaaga aacgctggaa gccacggtca gccgcagtaa
    14281 acacgccttc atgctcgccc cacgacgttg acggcaaaat gacatccgcc gccgacgcgg
    14341 ttttggtcat aaagatgtcc tgaacgatga ccagttccag atcttcaaag gctttacgta
    14401 ctgccgacag ctccgcatca gtttgcagcg gatcttcgcc cataatgtac gcggcacgca
    14461 cttcgccatg cgctgcgcgg tgcggcagct cgctgatgcg atagccggta tgagcaggca
    14521 ggctttccac gccccaggct ttggcgaatt tctcgcggtt agccggatct ttcacgtact
    14581 ggtatcccgg atacgtatcc ggcagcgcgc ccatatcgca ggcaccctgc acgttgttct
    14641 gaccacgaac cgggtttaca cccgcatgcg gcttaccgag gttaccggtc agcatcgcga
    14701 ggctggtcag agaacgcacg gtttccacgc cctggtagaa ctgggttaca cccatgcccc
    14761 acaggatggc ggcgcttttc gcctgggcat acatccgtgc cgcctgacga atctcactgg
    14821 cgctgacgcc ggtgatatct tcaaccgact ccggcgtgta gccttcaacg attttacgat
    14881 actcttcaaa gccttctgta cgggaagcga cgaacgcttt gtcgtacaga ttttcttcaa
    14941 taatgacatg gcccatcgca ttcaacagcg cgatgttcga gccgtttttc agtgcaatgt
    15001 gcatgtcagc aatgcgcgcg gtttcaattt tgcgcggatc gcagacgata attttcgccc
    15061 cgttacgttt agcgttaatt acgtgattcg ccatgattgg gtgggaatcc gccgggttgt
    15121 acccgaaaac gaacactaaa tcggtattat caatttcgtt aatagcattg ctcattgcgc
    15181 cattaccgac cgattggtgc agacctgcaa ccgatgggcc gtgtcagaca cgagcgcagc
    15241 agtcaacgtt attggtacca ataacggcgc gcgcaaattt ttgcattaca tagttggttt
    15301 cgttacccgt accacgcgag gagccggtcg tctggatggc atccggaccg tacttctctt
    15361 tgatggcgct caggcgctcg gcaacgtaat tcagtgcctc atcccaggaa acaggttcga
    15421 gtttgccgcc acgctggcga cggatcatgg gggttttcag gcgcggggtc aggatctggg
    15481 tatcgttaat gaagtcccag ccataataac ccttcagaca cagggtaccc tggttggttt
    15541 tcccctgcgc tgcctccgcc cggacgattt tgccgttatc gacgaccagg ttgattttgc
    15601 aacctgatgc gcaatagggg caaaccgtga cgactttttt catcggtctc gctccagtta
    15661 atcaaatcac gcatacgcgc tctcgactac agtatgcatc ttttatgcca cattttattt
    15721 ggggtcattc cctgatatta cgggcactat ttattcaaaa ctctgacgaa aaacaggctg
    15781 tcgtcagttt tgacgtgacg aaacgaaata ccgcgtgaca gccatcacgc ggcagacatt
    15841 ttattttttc tcgacgacgg gagccgcctg atacccgccg cccagcgatt tcatcaactg
    15901 aatgctgtgg atcacccggc ggctgtccag catcagtaat gacatctctt cggcaagcac
    15961 tggcaaccgg gcttcggtgg cctgtaagcg gctggttaag ccgcgctgat aggcggcctc
    16021 ggcagcgcgc tgggtgaagc gcgttgcttc cacgcgttca gcctgcattt ctcgttcgtc
    16081 gttgagcgtt tgcagacgcg tgccgttgac ggcaacgtca cgcaccgcgt tcagtactga
    16141 ctggttgtaa cgttcaatca tcatgttgct ggcggcgcga gtgccttcga gattggcatt
    16201 caaccgtcca ccgtcaaaca gcggcaattt cagacccggg atgaagttga actggcgact
    16261 ggtttttttg aataaggtat ccaggtggat ggagtccaga ccgaaaaacg ctttgatatc
    16321 aaagctcggg tagaacagtg cccgcgcgga atccacctga tctaatgacg cctgaacata
    16381 ccagcgcatg gcttgcagat ccgggcgtct ggcgagcaac tcataagaga gtgtcgccgg
    16441 aatgccggtc tggactcgtg gtaatgccac cggtttgatc tccggcatat cgctggcccc
    16501 cgcgccaatc aatgcacgca gagattctcg cgtttcggtg atttgccctt tgacggcagc
    16561 aatttgttta tcgaccgcca gaatctgtgc ccgcgcgccg tggaaaggca cttgtgcttc
    16621 cagaccgtgc gccactttac tctggtgcgc tttcaccgcg taatcaatca catcgcgagt
    16681 ttgttctaac agatcgagca tctgatagct ggcctgcata ctgtaataaa gctgcgctat
    16741 gcccgtggtc agcgatagct ctactgctgc ggtttctgcc agcgcggcat tatgcgcgcc
    16801 aatggcggcg gcaaccgctg agcgatgcac accccacaaa tcaagatcca gtccggcaaa
    16861 caaacctact gtggcttccg tatagtacgg cccgtccata cccagtgagg gcgcatccat
    16921 cgcataaggg cttaaaaagc cgttcgccga gacgcgttgg cggttgagca tccctaacgc
    16981 tgcgacctgt aattgtgaac cggcatctaa caaatcggcc tgggactgcg ctttttcttc
    17041 ccgcagtttc gcttcggcga gggtgtgtga accacttagc gtccgttgga tcagcgcatc
    17101 cagctgcggg tcattgagtt gtttccacca ctgcgcctgc ggccagccgg agctggcaag
    17161 atgaatatcg tcggccagtt tgatttgttc cggtttgagc tgttgatgag gtgcagaatc
    17221 cttacgtacc agggcacagc cggaaatcag cgtcgtgctg ccgagaatgc tgcacaacag
    17281 cagacgtgaa agttgacgat tgatcattgc gtggctcctt gtgcctgttc cgtggcgggc
    17341 gttaatgccg gggctgtcca gtctggcaag cgggcgaaaa gctggcagac gtgttgctcc
    17401 tgttttaata aggtgggcag gatggcctgc gaggcgggtg tctcttcaag cgttatttga
    17461 ggagaacagc tgagtgcggt tgccagaccg gcagcgtatt tttccagggc gtcggcaaac
    17521 tgacctgctc tgtccggctg tagtgcgtta tccagcgcct gcgccgagtt ccaggtggca
    17581 tcccaggcgt gaagaagatc gcggccctga cgaataaccg tttgcgaacg ttcaatcagt
    17641 aaggcgcgtt cttcgctgtc cagttgacgc tccagcgcca cgcgttggca catctcttca
    17701 caggcattaa acgccgcatg cagacctata cgaatttgca gataagtgcg cagagccgtg
    17761 acttcctgct ggcgtgggat ccgcattact ttacttagca tacccagcgc accggctagt
    17821 ttttgcggca gagtgcgcgc ttcactttca ggccagacaa aggtgtaaat caccgcggac
    17881 accacggtac caatgatgat acccagggcg cgatcgcgaa tttccaccag gtcgtacact
    17941 gggccaaaaa cgttttcgag cgtggcgagc gcgaaggtga cgaccatctg tgtgccgata
    18001 taagaagagc gttcagagct ggtggcaatc catgcgccca acaggaaaat cggtgccagc
    18061 acaaacagca attcgacaat attgtccagc cagggcatga ccagtagcgt gaataacagc
    18121 gccagaatcg cgccgcaaaa ggccccgcca aaacgcagca ccatcttctg gtacgacgaa
    18181 ccgacatttg gattagcgac gatcacgcag gtcagcatac aggtgtgaat gccttcccag
    18241 tccacgccgc tgtaaaaggt gtaacagatc aaacaggcga gcaatgtttt taccgcgtag
    18301 cgtatatagt ctggattggt aaaagcatcg gcgaccattg atggcggttt ggcggcgggc
    18361 gttggcggcg tattcgggtt catctggccc agttgtaaca acgtctggca gatattctcc
    18421 aggttacatt cccgtgccgc caccgcttca ctttcactga tccgccagtc gctttgccag
    18481 cactgacctt cagcaacggc atgctgcagc ttgttgattt ctgaggctaa tttttgccga
    18541 aattcaataa ttgcctgaga atcagcaaaa gaggtgggat cgtagcgatt cagcgtcgag
    18601 taaatgtagg ttaccgttgc cacgcagctt tgccaccatg cgctttgagt tcgccagttg
    18661 gcatcgtccg cgagacaaaa gacattcagt ttttgcagcg ccagcgcctc tctttcaatc
    18721 cgcgtttcgg gtagcggtgc gaggctgtct gtcaggtgac taatggcatc atcaagccga
    18781 tcattaagcg cctgatgcat ttgcgaaatg gcacgactgg gaaaccacag cacgccgatt
    18841 aacgtcatca gcaaggttgg atagaggcca acaacgatac accacagcgt taagcgcacg
    18901 accacttccg gatagtcgag catggcgggg aaggtttgcc cgtaaatggc gacaatggcg
    18961 acagcgaaaa agaccagtcc cagccgatgg gtgcgcatca aaaacatgca gcccatcagg
    19021 atcggcccgg cgatgatcaa tcggatcaac ggttcgccgt atgaccattt gtagatcaaa
    19081 aacaggctgc cgatctccag caccgtggca accacaaaca agatcgccac aaatttggtg
    19141 taaaacgcgt tcgactgaat accgtaaaac agcactgcca gcgataacgc cacaaaaggg
    19201 atctcaaaag tcatcgagat cagaatcacc agcaggcagc ctacccagag ttgcacgatc
    19261 tgcggcacgc ggccgggtcg ccgctcgctt aactcttcat gaaagaacgc cagcagcctg
    19321 accaccggta atggcaggga gttgagcgcg ctcattattg cggctcaaga ttagcgactg
    19381 ccgaagcgcc gatgcggaac atttccgggt caggtttatc gaccatgatt ttgaccggaa
    19441 aacgctgggc aacgcggacc cagttaatag agcgagaaac tttcggcagg ccgcccagca
    19501 ccaggccgcc gtcattcggt agcacaccgt agccaatcga atccacttta ccctcgaagg
    19561 ttttgccgct gtcactcatc aggcgaatcg ttgcgggtgt acctgagcga atatttttca
    19621 gatcggtttc gcggaagttg gcgatcacgt accagtgacg agtgtcgatt agggtaaaaa
    19681 tagggcgcat ggcagaagca aattgcccga cggaggtttt gagggaaatg acccggccat
    19741 caaacggcgc gcgaacggtc gccatttcca gatgcagttt ggtcagggca atatccgctt
    19801 cgaccgccgc acgctgggca actaatacat ccacgccgct gacggcgctg gcggctgact
    19861 gcgcctgtaa caatacggca ttaagatccg cttctgcggc gcgctgcgcc gttcttgcac
    19921 ggtcaacatc ttccgctgag acaaaacctt ctttcagtaa tggctcggtg cggcgtaatg
    19981 tatctgtggc ctgtttcgcg gcggcacgtg ctttttctac cgtggcatta accgagtcgg
    20041 caccaaactg ttgggcgtca acgctacgct gggtgagcat aatttgctta tccagcgccg
    20101 cgagggaggc ttcagctttc gccagattgg cttcgtacgg gcgcgggtca atgcggaaca
    20161 gcaaatcgcc ctgtttgact gcctggttgt cggtgaccgc cagttctaca atgcggccgc
    20221 tgacttccgg caccacatca atggtatctg ctgacgcgta agcgtcatta gttgatggcg
    20281 cactgtctac gcgccagata acgaaaacaa gggcaaccag cgccaacgca accactaaca
    20341 gagcagggaa tttactgcga ggagcttttt tcggcgtact ttccatgagc gcgtctcaaa
    20401 tagattagaa aaatgccagc cagaacagca tggcgtagac agcaaaaagg gcggtataaa
    20461 taattccgac aaatgccaga ttgatatttg cccgctgaat aattcgcctc gtgattagcg
    20521 tcaaaataag gctggcaatg gcgcagaaaa accagctggg ataataagcg ccgatcaccg
    20581 ggattgccgg agataatgag catcccgaaa ccatgaagac gggaattatc caggctgttt
    20641 ttttgagttg catcgccatg cgagagagaa ctgttggcat attaaataca tcctgtttgc
    20701 tgcgaacaat atctgtagtg aatatcaata tccattgaag gcgtcagtat ggctattttc
    20761 ttgatgaata aaaatagctt tattcagcca ccgcattcat aacttatata ttttatgtgt
    20821 taattgattg tatgtatttt tataataaat gcttttgggg gcttaagcgc ccccaaaagt
    20881 gagtggcatt aatttggggt tacgatattc acccacaaat cgaaattatc cagacaggca
    20941 ataatttctt ccagtttcgc gccattgcca ataattttgg ctttcttcgc ttttaccaga
    21001 tccgccattt tggcttgtcc tgtcagcacg gcgtgcagat cttcacggct gatgtagaaa
    21061 gaggcgtcgg cttgcggttg cagtgtttta cggtagttaa gcacgctatc gttcagcgtc
    21121 aggttgaggt tatcgccgtt gctcatattg aagttcaggc tgatattttt acccgcagct
    21181 ttcgcgctat cgaggcgaac ggacataaag tcgaacagca tttcgaccga catcccgcga
    21241 atggtgtccg gggaaccggt ggtgccgtgg ctgaacttat gcaccccttc gcgcagctct
    21301 ttcgcgccgg tcaggtagaa accgcgccag gtggcggact cggcctgata gcccagctgt
    21361 tcaaagttat tcgcttgcag attcttcgcg acctggtcac ccgggttggc ggcaatcacc
    21421 tgtttcagca gttctgccga ccagcggtaa tcaccttgct tgttcgcttc ttgcgccagg
    21481 ctgatgacac gggcagaacc gcccagcgcc tgcacgtaac gtttacccat ctccacctga
    21541 ccatacggat gcaggttagc cgggttaccg tcgtaatagc caagatagaa gttatacacc
    21601 gcgcgggcgt tgtggctgac agaaccgtaa tagccacggc tggcccagtt attggcaagt
    21661 gcaggcggca gtttaatcat gtcgccgatt tcattcatgg tgtagccctg gttcgccagg
    21721 tgcagggtct ggtcgtgaat gtacttgata gtatcgcgat atttaccaat ataatcattg
    21781 atatgcttat tgccccggac cggccaggtg tgcggcataa acaggacttc cgcgtcgtta
    21841 ccccacatat ccagcgtttc gttcagatac tcggtccact tgctggtgtc gcgggttttc
    21901 gcgccgcgca gagtgtagaa gttgtgcagg gtatgcgtgg cgttctcggc ggtacacagc
    21961 gctttcaggg ccggaatata gaagtgcatt tcggctggtg cttcgctacc tggggtcatc
    22021 aggaagtcaa actccaggcc gtcgataatc atcttctcac cggttttggt gatggttttg
    22081 ttcggtgcga tgatgctcgg gtagcccgat gccagcgtta cgccaagacc attgccgatg
    22141 ttaccctgag ggttatgcgc cagcagcagg ccgtaggagt aaagtgcacg gtggctcata
    22201 atattacccg ccagtacgtt ttcgctgatg gcttcgtcca taaagccagc aggggcgata
    22261 acctgcactt taccggattt cacatcagct tcagagataa tgcctttcac gccgccatag
    22321 tggtcggtat ggctgtgggt ataaataacc gcaacaatcg gtttttgcgg gcgattttgg
    22381 aagtaaaggt caagggcggc ttttgcgctc ggtggcgtca ccagcgggtc gatgacaata
    22441 atcccggtat caccttcgat aaaggtgatg ttggagatat cctgaccgcg aacctggtac
    22501 attctgtcgg tgactttaaa caggccggaa ataccgttta actgcgactg acgccacagg
    22561 ctagggttaa cggtttcggg cgcgggcgca ttgatatcaa atttataatc ttccccg
//
LOCUS       DADMIB010000058        22588 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.058, whole genome shotgun sequence.
ACCESSION   DADMIB010000058 DADMIB010000000
VERSION     DADMIB010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22588
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.058"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..257)
                     /locus_tag="JNZ89_002070"
     CDS             complement(<1..257)
                     /locus_tag="JNZ89_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY8935955.1"
                     /translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
                     LALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDC"
     gene            complement(248..718)
                     /locus_tag="JNZ89_002071"
     CDS             complement(248..718)
                     /locus_tag="JNZ89_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY8935956.1"
                     /translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS
                     QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV
                     EMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL"
     gene            complement(903..1697)
                     /gene="thyA"
                     /locus_tag="JNZ89_002072"
     CDS             complement(903..1697)
                     /gene="thyA"
                     /locus_tag="JNZ89_002072"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HAY8935957.1"
                     /translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
                     VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
                     TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
                     CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
                     QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYAPHPGIKAPVAI"
     gene            complement(1704..2579)
                     /gene="lgt"
                     /locus_tag="JNZ89_002073"
     CDS             complement(1704..2579)
                     /gene="lgt"
                     /locus_tag="JNZ89_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HAY8935958.1"
                     /translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
                     ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
                     HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
                     PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
                     RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
                     MMVWAYRRSPQQHVS"
     gene            complement(2730..4976)
                     /gene="ptsP"
                     /locus_tag="JNZ89_002074"
     CDS             complement(2730..4976)
                     /gene="ptsP"
                     /locus_tag="JNZ89_002074"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY8935959.1"
                     /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
                     HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
                     KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
                     ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
                     AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI
                     EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
                     LAELPQDRLVGVVVRDGAANSHAAIMVRALGLPTVMGADIQPSVLHRRTLIVDGYRGE
                     LLVDPEPILLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
                     LGSRIDGIGLYRTEIPFMLQSGFPSEEEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
                     PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
                     EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
                     YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
                     GLGYRHLSMNGRSVARVKYLLRRIDFAEAENLAQRSLEAQLATEVRHQVVAFMERRGM
                     GGLIRGGL"
     gene            complement(4989..5519)
                     /gene="rppH"
                     /locus_tag="JNZ89_002075"
     CDS             complement(4989..5519)
                     /gene="rppH"
                     /locus_tag="JNZ89_002075"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001655775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HAY8935960.1"
                     /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
                     SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
                     QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
                     NTPKPQNTSAYRRKRG"
     gene            6204..6893
                     /gene="mutH"
                     /locus_tag="JNZ89_002076"
     CDS             6204..6893
                     /gene="mutH"
                     /locus_tag="JNZ89_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HAY8935961.1"
                     /translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENL
                     KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
                     NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWTPNEEEDRQLREDWEE
                     LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
                     SALLARHFLIQ"
     gene            6962..7675
                     /locus_tag="JNZ89_002077"
     CDS             6962..7675
                     /locus_tag="JNZ89_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HAY8935962.1"
                     /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
                     RAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
                     ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
                     VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
                     FFSIAVESLNLIRNKKNPL"
     gene            7813..8031
                     /gene="ygdR"
                     /locus_tag="JNZ89_002078"
     CDS             7813..8031
                     /gene="ygdR"
                     /locus_tag="JNZ89_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YgdR"
                     /protein_id="HAY8935963.1"
                     /translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
                     DTGLVSYHDQQGNAMQINRDDVSQIIER"
     gene            8139..9179
                     /locus_tag="JNZ89_002079"
     CDS             8139..9179
                     /locus_tag="JNZ89_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(H)-dependent aldo-keto reductase"
                     /protein_id="HAY8935964.1"
                     /translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
                     NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
                     QALDRKNIREALHDSLKRLQTDYLNLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
                     LDALAEYQRAGKIRYIGVSNETAFGGMRYLHLADKHDLPSIVTIQTPYSLLNRSFEVG
                     LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKTAGARNTLFSRFTRYSGEQTQKAVAA
                     YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI
                     EAVHQVYTYPAP"
     gene            complement(9211..10404)
                     /gene="lplT"
                     /locus_tag="JNZ89_002080"
     CDS             complement(9211..10404)
                     /gene="lplT"
                     /locus_tag="JNZ89_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HAY8935965.1"
                     /translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
                     FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
                     FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
                     WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET
                     RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNATPTYLNAMVAIGIVVGAGAAAKL
                     VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERG
                     KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWI
                     WQRRH"
     gene            complement(10397..12556)
                     /gene="aas"
                     /locus_tag="JNZ89_002081"
     CDS             complement(10397..12556)
                     /gene="aas"
                     /locus_tag="JNZ89_002081"
                     /EC_number="2.3.1.40"
                     /EC_number="6.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acyl-ACP--phospholipid
                     O-acyltransferase/long-chain-fatty-acid--ACP ligase"
                     /protein_id="HAY8935966.1"
                     /translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
                     LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
                     FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
                     TLHILPPTQVAMPDASRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
                     AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI
                     ARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
                     DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
                     NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
                     VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
                     EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
                     YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV
                     SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTLDKLQQYAREHGVPEL
                     AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE"
     gene            12945..13976
                     /gene="galR"
                     /locus_tag="JNZ89_002082"
     CDS             12945..13976
                     /gene="galR"
                     /locus_tag="JNZ89_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalR"
                     /protein_id="HAY8935967.1"
                     /translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
                     YHPNANARALAQQTTETVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ
                     KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
                     RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE
                     PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
                     VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
                     EASHHATSD"
     gene            complement(13983..15245)
                     /gene="lysA"
                     /locus_tag="JNZ89_002083"
     CDS             complement(13983..15245)
                     /gene="lysA"
                     /locus_tag="JNZ89_002083"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HAY8935968.1"
                     /translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
                     QFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
                     VIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
                     NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
                     LQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
                     SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
                     TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRSLL
                     PEVLFDNGQARLIRRRQTIEELLALELL"
     gene            15367..16302
                     /gene="lysR"
                     /locus_tag="JNZ89_002084"
     CDS             15367..16302
                     /gene="lysR"
                     /locus_tag="JNZ89_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator LysR"
                     /protein_id="HAY8935969.1"
                     /translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
                     VIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
                     VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER
                     TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
                     RMIVETHSAASICAMVRAGVGVSVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH
                     RPSSALVQAFSEHLQAGLPKLVTSLDAILSSATTA"
     gene            complement(16289..16981)
                     /gene="ygeA"
                     /locus_tag="JNZ89_002085"
     CDS             complement(16289..16981)
                     /gene="ygeA"
                     /locus_tag="JNZ89_002085"
                     /EC_number="5.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HAY8935970.1"
                     /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVD
                     FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
                     HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
                     IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
                     IHAEDAVAFMLS"
     gene            complement(17110..18525)
                     /locus_tag="JNZ89_002086"
                     /pseudo
     CDS             complement(17110..18525)
                     /locus_tag="JNZ89_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311725.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
     gene            complement(18840..19601)
                     /gene="kduD"
                     /locus_tag="JNZ89_002087"
     CDS             complement(18840..19601)
                     /gene="kduD"
                     /locus_tag="JNZ89_002087"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HAY8935971.1"
                     /translation="MILSAFSLEGKVAVVTGCDTWLGQGMALGLAQAGCDIVGINIVE
                     PTETIEQVTALGRRFLSLTADLRKIDGIPGLLDRAVAEFGHIDILVNNAGLIRREDAL
                     EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA
                     SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW
                     GLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR"
     gene            complement(19631..20467)
                     /gene="kduI"
                     /locus_tag="JNZ89_002088"
     CDS             complement(19631..20467)
                     /gene="kduI"
                     /locus_tag="JNZ89_002088"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HAY8935972.1"
                     /translation="MDVRQSIHSAHAKTLDTQGLHNEFLVEKVFVADEYTMVYSHIDR
                     IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD
                     ALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR
                     RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH
                     MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD
                     LR"
     gene            complement(20754..21935)
                     /locus_tag="JNZ89_002089"
     CDS             complement(20754..21935)
                     /locus_tag="JNZ89_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708633.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HAY8935973.1"
                     /translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
                     AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
                     QCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT
                     AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMIQSNGQTLVVDTDEQ
                     PCTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
                     AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
                     RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
                     E"
     gene            22190..>22588
                     /locus_tag="JNZ89_002090"
     CDS             22190..>22588
                     /locus_tag="JNZ89_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8935974.1"
                     /translation="MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITA
                     LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVL
                     IYAVAITNSLTEQLAKHMVIDLRIRMLVSLG"
BASE COUNT         5792 a         6049 c         5442 g         5305 t
ORIGIN      
        1 atacagtcac cctgtccgac aatttccagc ccttcgccgg tacagatgcc atgacaataa
       61 cccgccctct ggagatgctt cgcgacggta aatacccgca gccagatttc atcttccagc
      121 gccagcttac gggtgctcgt taaactttca cgctgtaacg caggcagaaa gcgtgcagcc
      181 cccagcaaca atacgctact gatcgccata gcaatcaaca cttccagcag agaaaaacct
      241 tgctctttta caggcatcct tctgtttctc cttgctgaca aagccggagt cttccccacg
      301 gcgaaaccac cagccaccac tcgcccgttg agtttttgaa gcgaatatgc ccggcccatg
      361 cggtattgcg caggccaaag aaagcaagcg aaggtgtcag gtcgctcatt tcgacttcgg
      421 gccagcgtgg cacaaagacc aatggtgaac tgccatgaca ggtattggcc ccagcagcgg
      481 aactcacaag gcaccataac gtcccctccc tgataacgct gatactgtgg tcgcggttat
      541 gccagttggc atcttcacgt aaatagagca aatagtcccg cgcctggctg gcggtttgcc
      601 atagccgttg cgactgctgc cagtattgcc agccatagag tccacttgcg cttagcatga
      661 ccaaaatcag catcgcgacc agcgtttcaa tcagcgtata accacgttgt gttttcatgc
      721 cggcagtatg gagcgaggag aaaaaaagac gagggccagt ttctatttct tcggcgcatc
      781 ttccggacta tttacgccgt tgcaggacgt tgcaaaattt cgggaaggtg tctcgaagaa
      841 tttaatggag ggtaaaaaaa accgacgcac actagcgtcg gctctggcag gatgtttcgt
      901 aattagatag ccaccggcgc tttaatgccc ggatgcggag cgtagccttc aatctcaaaa
      961 tcttcgaaac ggtagtcgaa gatggattcg ggtttacgtt tgataatcaa cttcggcagc
     1021 ggacgcggtt cgcggcttaa ttgcagatga gtttgatcca tatgattgct gtacaggtgc
     1081 gtgtcgcccc ccgtccagac aaaatcgccc acttccagat cacactgctg cgccatcata
     1141 tgcaccagta acgcgtagct ggcaatgtta aacggcaggc cgaggaaaac gtcacaggag
     1201 cgctgataaa gctggcaaga gagtttgccg tctgccacat agaactggaa gaacgcatgg
     1261 cacggtgcca gcgccatttt atccagttcg cctacgttcc acgctgaaac aataatgcgg
     1321 cgcgaatccg ggtcgttttt cagctggttc agtaccgtag tgatctggtc aatatgacga
     1381 ccatccggcg ttggccaggc gcgccactgt ttaccataca ctggcccgag gtcgccgttt
     1441 tcatcggccc attcgtccca gatggtgaca ttgttttcgt gtagataagc aatgttagtg
     1501 tcgccctgca gaaaccacag cagttcatgg atgatggaac gcaggtggca acgtttagtt
     1561 gtcaccagcg ggaatccatc ctgcaggtta aaacgcatct gatgaccaaa aatggaaagc
     1621 gttccggttc cggtacggtc gtttttctgt gtgccttcgt cgagcacttt ttgcatcagt
     1681 tctaaatact gtttcatggt tcctcaggaa acgtgttgct gtgggctgcg acgatatgcc
     1741 cagaccatca tgatcacacc cgcgacaatc atcgggatgg aaagaatttg tcccatgctg
     1801 atgtactgca cccaggcacc agtaaactgc gcgtcgggct ggcggaaaaa ctcaacaatg
     1861 atgcgaaacg cgccgtaacc aatcaggaac aaacctgaga cagctcccat tgggcgcggt
     1921 ttacgaatat acaggttgag gataataaac agcactacac cttccagcaa cagctcgtaa
     1981 agctgtgatg ggtggcgcgg cagcacaccg taagtatcga aaatggattg ccactgcggg
     2041 ttggtttgca gcagcaaaat atcttctgta cgggagccag ggaacagcat ggcaaacggg
     2101 aagttcgggt caacgcggcc ccacaattca ccgttaataa agttgcccag acgcccggca
     2161 ccaagaccaa acggaatgag tggtgcgata aaatcagaga cctggaagaa ggaacgttta
     2221 gtacggcggg cgaagataat catcaccacg ataacgccaa tcaggccgcc gtggaaggac
     2281 atgccgccgt cccagacacg gaacagatac agcggatcgg ccataaactg cgggaagttg
     2341 tagaacagaa cataaccaat acgtccaccg aggaagacgc cgaggaagcc cgcatagagt
     2401 aagttttcaa cttcattttt ggtccagcca ctgcccggac gattcgcccg acgtgttgcc
     2461 agccacattg caaaaatgaa acccaccaga tacatcaggc cgtaccagtg aagcgccacg
     2521 ggtcctattg agaaaatgac cggatcaaac tccggaaaat gcagatagct actggtcatc
     2581 tgtcaccaca agttcttgtt atttcgctga aagagaacag cgattgaaat gcgcgccgca
     2641 ggtttcaggc gctccaaagg tgcgaataat agcacaaggg gacctggctg gttgccggat
     2701 accgttaaaa gatatgtata tgatccgcgc tataaccctc cgcgaatcag cccgcccatg
     2761 ccgcgacgct ccataaaggc tacaacctga tgacgaactt cggtcgccag ttgcgcttcc
     2821 agactacgct gcgcaagatt ttctgcttcg gcaaaatcaa tgcgccgcag caggtatttt
     2881 acccgcgcta cagaacgtcc gttcatagac agatggcgat acccaagccc aatgaggatt
     2941 gccacgcaca tgggatcgcc cgccatttca ccgcacaaac ggagatcgat accatgtatt
     3001 tccgcttccc gggcgatcat tgccagagct cgtaacattg caggatgaag gctgtcataa
     3061 atgttcgcca cccgggtatt gttgcgatca acggccagaa tgtattgagt cagatcgttg
     3121 gtgccaacag agatgaaatc gacccgcttt gccagatgcg gcagcataaa taccattgac
     3181 ggtacttcca gcatgatgcc gatacgtggt ttgggaattt cgtaaccgat catctcctcg
     3241 acttcacgtc cggcacgttc aatcaggcgg cgtgcttcgt caacttcatc gaggctggtg
     3301 accatcggca acagaatatt caggttgccc gtagcggcat tagcacgcag catcgcccgc
     3361 acctggatca agaagatctc cggctgatcg agcgtaatgc gaatcccacg ccaacccagg
     3421 catggattct cttcgctgat cggcatgtaa ggcagctgct tatctgctcc gacatccagc
     3481 gtacgcaagg tgacgggttt atcattgaac atttgcagca tcccctgata ctgcgccacc
     3541 tgttcttctt ccgacgggaa accactttgc agcatgaatg ggatttcagt gcgataaaga
     3601 ccgatgccat caatacggct gcccagtttt tcttcatgtt ccgggcttaa accagcattg
     3661 agcatgactt ttatacgctc accgcttttt aactgcgcgg gtaaattgac gtcatcttcc
     3721 gccagacggc taagctcaat ctcttcacta attagccgct gatattcttg cagcagtatc
     3781 ggctccggat cgaccagcaa ttcaccgcga tagccatcaa cgatcagcgt cctacgatgc
     3841 agcaccgaag gctgaatatc cgcgcccatc acggtaggga gccccagcgc acgtaccatg
     3901 atcgcagcat gggagttggc tgcgccatct cgcacgacaa caccgactaa gcgatcctgg
     3961 ggcagctcag caagagttgt cgctgacagt tcatctgcca ccagaatgaa acgttccggc
     4021 caggcgttcg gcccttgatt agcgtcatca agatgaaaca gcaatcgctg acccagcgca
     4081 cgtaaatcgc cagcccgctc tttgagatag ttatcgctta gcgcggcaaa ctgttcggca
     4141 aatttttcaa tgaccgtttt taccgcccac tctgccaccg agcctttatc aacctcggca
     4201 aacaattcgc gacgcagccg ggtgtccgaa agcaggtgcg agtaaagatc gaaaatagcc
     4261 gccgtttctt tttgtgctcc ggcggcaaag cgtttgctgt agcggcgaaa ctcgtttgcc
     4321 gcttcttcca gcgccccggt caatcgttcg cgttccagag ccggatccag cgttgatgcc
     4381 tgatacacct gttccattaa aggtaacgtg gcatcctgcc agccttcggc aatcgccaca
     4441 ccaggtgctg ccggtaatgc gcggattcgc gtctggcgat attgcccaaa caaggcagtc
     4501 aactgcgact gagaaagaat agctgccatc tgggtggcaa gcgtcaccag gaaggattct
     4561 tcactttcgt catactggcg caactctcgt tgctgtacca ccagtacacc aagcaactgg
     4621 cgacgttgaa taattggtac gcctaaaaac gcgcggaaac gttcttcttt tacggagggg
     4681 atgtatttga agctggggtg cttttgcgca tctgcaaggt ttatcggttc cgccagcctg
     4741 ccaaccaggc cgacgatccc ttcatcaaac gcgagcgtta cagtgcgacc gcgtggtttt
     4801 ttcagccccc gggtcgccat caggtagtaa caacgtcgat catgatcggc caggtagacc
     4861 gaacagacct cggtatccat cgcaagacag atgtcggtaa ccagaatatt taacgcctca
     4921 ttcaggcgtg gtgcgctggc taccttttcg actatttcgc gcaggcgagt gagcataatt
     4981 ggcgtgactt aacctctttt acgtcgataa gcagatgtgt tttgtggttt tggcgtattt
     5041 tcctgcagtg acatcaccac actcgcgaac tctttcatta ccctacggta gacatcacgt
     5101 ttaaatgaca ccacctgtct gaccggatac cagtaactta cccatcgcca gccgtcaaac
     5161 tctggtgtac tgctggtttg catattgatt tctgcatcgc cgctcaccag ctgcaagaga
     5221 aaccattttt gtttttggcc gatacaaacc ggcttcgtgt cccaacgcac caaacgtttc
     5281 ggtaatttgt agcgcaacca gttacgcgtt gaagcaagga ttcgaacgtc tttgcggctt
     5341 aatcctactt cttcaaacaa ttcacggtac atcgcctgct ctgcggattc tccggggttg
     5401 attccgcctt gcggaaattg ccaggagtgc tgaccaaatc gccgggccca cattacctgc
     5461 ccctggcgat tacaaatcac gatacctacg tttgggcggt agccatcgtc atcaatcacc
     5521 ggactacctc aaaataaagc tttatatacg aatgattgtt tcatactcca ggaagacggt
     5581 aaaccactct ctgcagggca ttacacacta ataacaattg aataactcac agttatgtgc
     5641 agagttataa acagaggaag gggtggatag ccgtttttat tcaccttttc tgtggataga
     5701 gttgtgaaga actacggaat tactacggga aaacccggag cattctgaat aagcccgata
     5761 taggcatttt aaaatattca ttataagtca atgcattaca tgtaatttga gtaatgaaaa
     5821 agagtaattc gtgacccagg tcacacctct catttacggg ttggcgaaag atcaaccaat
     5881 gccgtattta tccacagaat gtgccactaa gttaagcact gaaccactaa aaactggagt
     5941 ttcgtcgcac gtcaaggctg taaatggaaa cagtagtgga ggtttttcac agttatccca
     6001 gctttctgtg gataacatgg tgtaagatcc tgtttatttt cagtgaccag atttggaaaa
     6061 cctattgcag tgctgcgcaa ctcgattatc ggcagcctaa aaagcaatat aaatcagaga
     6121 attgaacaac acatgtggaa aaagttacac tgcgaatatt cggtacataa ttgctgtttg
     6181 ttttttaacc aaggtatcat gacatgtccc aacctcgccc actgctctct cctcccgaaa
     6241 ctgaagaaca gttgttagcg caagcacagc aactttctgg ttatacattg ggagaactgg
     6301 cggcacttgc cgggctggtt acgccagaga atttaaaacg cgataagggc tggattggcg
     6361 tgttactgga gatctggcta ggtgccagcg cagggagtaa acctgagcaa gattttgctg
     6421 ctctgggcgt ggaacttaaa actatccctg tggatagtct tggtcgtccg ctggaaacaa
     6481 cattcgtttg tgttgccccg ttaacgggta atagcggggt gacctgggaa accagccacg
     6541 tgcgccacaa gctcaaacgc gtactgtgga taccggttga aggcgagcgc agcatcccgc
     6601 tggcgcagcg tcgcgtagga tccccgttgc tgtggacccc gaatgaagag gaagaccgac
     6661 agctacgcga agactgggaa gaattaatgg atatgattgt tctcggtcag gttgagcgga
     6721 tcaccgctcg tcacggggaa tatttacaga taagaccgaa agcagcgaat gcgaaagcgc
     6781 ttaccgaagc cattggtgcc cggggcgaac ggattctgac gctgccacgc ggcttttatt
     6841 tgaagaagaa tttcaccagt gcactactgg cccgtcattt tctgatccag tagccatcgc
     6901 tttgacctgc cgctttccgg gcatataatt accgcttcat ttttttggca gggcttttta
     6961 gatgttattt gcatggataa ccgatcctaa cgcctggctt gcgctcggta cgctgacgct
     7021 gctggagatc gttcttggga tcgacaatat tattttcctt tctctggtgg tggcaaagct
     7081 tcccacagca caacgtgctc atgcgcgccg tctggggttg gcgggagcca tggttatgcg
     7141 tctggcgctg ctggcatcaa tcgcctgggt tacgcgcctg acaaatccgc tttttacaat
     7201 attcagtcag gaaatttctg cccgtgattt gattctgctt ctgggtggct tgttccttat
     7261 ctggaaagcc agcaaggaaa tccacgaatc cattgaaggt gaagaagaag ggctgaaaac
     7321 acgcgtttca tcattcctcg gcgctatcgt gcagattatg ctgctggata ttatctttag
     7381 cctcgactcg gtgattacgg ctgtgggtct gtcagatcac ctgtttatta tgatggcagc
     7441 cgtggtgatt gccgtaggcg tgatgatgtt cgccgcgcgc tcgattggtg attttgtcga
     7501 acgccatcct tcggtaaaaa tgctggcgct ctctttcctg attctggtgg gctttaccct
     7561 gattctggaa agtttcgaca tccacgtacc gaaaggttac atctacttcg cgatgttctt
     7621 ctctattgcg gttgaaagcc tcaacttgat tcgcaacaaa aagaatccgc tctgatactc
     7681 cgtacgctct cctgcgggag ggcgtactca ctccttttac cctcacagtt taagattttc
     7741 ctgctttcaa gatatataac gtcgttttat aaacagacta ttatcatagg taggccaaat
     7801 gaggataacc ggatgaaaaa atgggcagta ataatttctg cagtcggact ggcgtttgct
     7861 gtttccgggt gttccagtga ttacgtcatg gcgaccaaag atggccgtat gattttgacc
     7921 gatggaaaac ctgaaattga tgatgatacc gggctggtga gttatcacga tcagcaaggt
     7981 aacgcgatgc aaattaaccg tgatgatgtt tcgcaaatta ttgaacgtta acaaataagg
     8041 tcagcatccg gctggcctta agatttttct ctttcccttt tcccttccct ctgccatttt
     8101 tatattcctt atgtcgtgat tataaaaagg aaacggctat gcaatatcac cgtatacccc
     8161 acagttcgct ggaagtcagc acgctggggc ttggcacgat gacgtttggt gaacagaaca
     8221 gcgaagccga cgcccacgca caactcgact atgccgtcgc tcagggcatt aaccttatcg
     8281 acgttgccga aatgtaccca gtacctccgc gccccgaaac gcaagggtta accgaaacct
     8341 acgtcggcaa ctggctggcg aaacatggca gccgcgaaaa gttaattatc gcctccaaag
     8401 tgagcggacc gtcgcgcaat aatgacaagg gcatccgccc ggatcaggcg ctggatcgga
     8461 agaatatccg cgaagcgctg catgacagcc tcaagcgcct acagactgat tacctcaatc
     8521 tttatcaggt gcactggccg cagcgcccga ccaactgctt cggcaaactc ggttatagct
     8581 ggacggattc tgcgcctgcg gtttcgctgc tggatacgct ggacgcactg gcagagtacc
     8641 aacgcgcggg aaaaattcgt tatatcggcg tgtcgaacga aactgcattt ggcggaatgc
     8701 gctacctgca tctggcggac aaacacgatc tgccgagtat tgtcaccatt cagacccctt
     8761 acagtctgtt aaaccgcagt tttgaagtag gtctggcaga agtcagccag tatgaagggg
     8821 tcgaactgct ggcctattca tgcctgggtt tcggcacgct gaccgggaaa tatctcaatg
     8881 gtgcaaaaac cgctggcgca cgtaatacgc tctttagtcg gttcacccgc tatagcggtg
     8941 agcaaacgca aaaagccgtc gcggcgtatg ttgatatcgc cagacgtcat ggcctggacc
     9001 ctgctcagat ggcgctcgcg tttgtacgcc gtcaaccgtt tgttgccagc actctgctgg
     9061 gcgcaaccac gatggatcag ctgaaaacta acatcgaaag tttgcatctg gagttaagcg
     9121 aagacgtatt agctgaaatt gaagcggtgc atcaggttta tacttatccg gcaccataag
     9181 attaacgccg gttaaaaccg gcgttaaata ttaatgacgg cgctgccaga tccacagcgc
     9241 cgttattgcc agcgcaaaca gcgcaccgaa gccaatgcca atgggcacga ccgggatgcc
     9301 taccattacc gccagcgagt aaatgcccag catcaacaac atggcgctgt tttcgccaag
     9361 gttttgtact gcaatcgcat tccccgcccc gacgcttttt ttaccccgct cctgtagcaa
     9421 cgcattgagc ggaacgacaa aaaagccccc catcacgcca atcagcatca acaaggcata
     9481 ggctggcagc agctcgtgtt gcagggaaaa aatcagtacc accacgccaa tcaaaatccc
     9541 ggctggcata cagcgtgaca cggtttccag cgtaactaac ttcgctgccg cacctgcgcc
     9601 aaccacgata ccaatcgcta ccatcgcgtt gagataggtg ggcgtagcgt tatcggtaat
     9661 gcccagcgcc accggtaccc acagcaccaa caggaaacgc agcgtgacac ccgctcccca
     9721 gaataaactg gtgcccacca gcgaaaaacg cgtttcacca ttgcgccata gcgaggtgca
     9781 ggcattcagg aaactgcggg tcatgttgat gagattccaa gactgccccg gacgcgccgc
     9841 cgccagtttg ggaatgtaga tattggcaac gaccgcacca ccgtaggcca gtgcgcatgc
     9901 ggccagggcg acgaggacat gccagtcagc cagcacacca ccggctacgg aaccgagcaa
     9961 aatcgccgct atggtagaag cttccattaa accgttagct ttcactaact tactacccgt
    10021 ggttaattcg ccgagaatac cgtatttcgc cggtgaatag gctgcagcac caacccccac
    10081 cagcgtatag ccgagaaacg gattgatacc aaagcagata ctggctgcgc ccagcagctt
    10141 caggccgttg gcaaacatca tcacccggcc tttggcgaag ctatccgcca cctgcccgac
    10201 aaacggcgca aaaagaatgt aagcacctac aaacaccatt tgcaggatgg gctggctcca
    10261 ctccggatag aactgcgctt tcagtaacgc cagagtggca aacagtaggg cattatcgcc
    10321 aaacgcagag agaaactgcg ccacgataac cgctttcatc cccttcgacc acaacgaagt
    10381 gttagtgtgc actgactcac tcatcgtgtt gttccgcttc gtctacccag cttttcaacg
    10441 tgacaaagtc aggtttgccg ctgccaagta atggcatctg tttcagatag cgaatatcgc
    10501 gcggtacagc aagctccggc acgccgtgct cgcgggcata ctgttgcaac ttatcgagcg
    10561 tcagttcgtt atctgtggtg aaaagcacca gtgcctcgcc tttgctggca tcgctcttaa
    10621 tcgcagtggc atggacttta tctggcgaaa caccaagtgc cagttgttcc accatttcca
    10681 gcgacaccat ttcgcctgca attttggcaa agcgttttgc gcggccctga atctgcacaa
    10741 agccctgctc gtcaaaacgc acaatatcgc cagtgtcata ccagccgcgc tccatttcgc
    10801 cgcgaacatt ctcggcggtg ggcacttcca gtacacctgg cttctccacc cgcagatagc
    10861 cgttcattat gttcggccct ttcagttgca ggcgtccgcc ctcttcgata ccaggaaccg
    10921 acaacaggcg cgcatccatt cctggtagaa tacgccctac cgtaccgggt ttcgccgcca
    10981 tcggtacgtt gatagaaacg acaggcgcgc actcggttac accatagcct tcaaggatgc
    11041 gcaggccaaa tttatcctgc caaagctgtt tggtactttc ttgtagtttt tctgcgcctg
    11101 ccaccacata gcgtagacga tagaagtcat acgggttggc gaaacgcgcg tagtgaccga
    11161 ggaaagtcga ggtaccgaac aacacggtgc aactgcggtc atacaccaac tccggcacaa
    11221 tgcggtaatg cagcgggctt ggataaagga acacttctgc acctgtaagc agtggcgtaa
    11281 acaggcctac cgtcagccca aaggagtgaa acagcggtaa tgccgacata aagcgatcgt
    11341 tggtggtgaa gtcggcaatc gttttaatct gctcgacgtt cgccagaatg cttttatggc
    11401 tatggacgac gccttttgga tggccttcag aaccggaggt aaagaggatc agcgcctctt
    11461 cttccggctg ctgttttacc tgcgccaggc gcggcatcag caaatgagcg aagatccata
    11521 ctttgtcggc agtggtgaca tctgctttta aatcttccag atagacccag cgcacctgag
    11581 taagttgctc cggcagatgc cagagtttgc ctttatcgag aaactggcgg gaagtgaaga
    11641 tggttttgat ttcagccgcc gtaatagcac tggtcagccc ttttacccca gcagtgtagt
    11701 tcatcattgc gggaatgcgg cgacgcgcga tggccccaaa aatcactgcc gcactgatgc
    11761 ctgcattggg cagcattaag ccgatgcgtt cgccttcaac actgtatttt tcaaggatgc
    11821 gtccaacaaa cagcgttttc gtaagcaatt tgcgatagga gtctggggta aagttgacgt
    11881 cttcgacaca tttcttcccg gctccgaagc ggtacattgc actcagtaaa gattcgtaca
    11941 gagtttcacg cgggcgcacc gccatacgcg cttccatcat tatttgatgc agcatttcgc
    12001 cagcgatttt gcgacggtca cgggcacgcg acgcatccgg catcgccacc tgcgttggag
    12061 gcaaaatatg cagagtaatt tgcgggaaca agcgacgttt aaccagacct ttcaggcggc
    12121 tgaagtgcgt aagttccgcc ccttcaatac gcacaggaat aaccgttgca ccagacttcg
    12181 ccgcgacaaa acccgcgcca tcgtagattt tcatcagcga gcctgtagtg gtgatgcgtc
    12241 cttcagggaa aatcaccact ggtcggccct gttccaccag acgtaccaga tgtttaatag
    12301 ccataggttg cgtcgggtcg agaggaacaa agtcgataaa tgatttcagc caacgcatat
    12361 accactgttg gcttattgag gtgtaaacgg caaacactgg acgcacaggt aaaaacagtc
    12421 caagcaaaat gccatcaata aaagagacgt gattaggcgt aattagaacg cgctcgccct
    12481 tcagtgcctg ggtgtcaccc gtaacgcgaa cgcgatacaa aacacggcac aaatttcgaa
    12541 aaaagctaaa aagcattcca actccctttg ctctgattca gtaaaagcga atggagggag
    12601 attacacgag ataaagaacg cgagcgacag taaattaggt gcgaaaaaaa acctgcgcat
    12661 ccgcgcaggt tggtgcaaga gacagggtac gaagagcgta ccgaataatc tcaccaatca
    12721 atacctctgg gatcaccact ttagcaacct gaagccaaac gccaccagcg gtcaatcgca
    12781 acagcgtttc gcaaagtgta accaaaggtt tgcaatctct ttttttgtct tacttatttg
    12841 cgtttggctc acattcccac gatgaaaaca cgccactcct tgaaccaacg ggcgttttcc
    12901 gtaacactga aagaatgtaa gcgtttaccc actaaggtat tttcatggcg accataaagg
    12961 atgtagcccg actggcaggc gtttcagtcg ccaccgtttc ccgcgtcatt aataattcac
    13021 ccaaagccag cgaagcttcc cggctggctg tgcatagtgc aatggagtct cttagctatc
    13081 acccgaacgc caacgcccgt gcgctggcgc agcagaccac tgaaacggtc ggtctgatcg
    13141 ttggtgatgt ttccgatccg tttttcggtg caatggtgaa agcggtcgaa caggtggctt
    13201 atcacaccgg taatttctta ttgattggca acggttacca caacgaacaa aaagagcgtc
    13261 aggctattga gcaactgatc cgccatcgct gtgctgcgtt ggtcgtccat gccaaaatga
    13321 tcccggatgc cgatttagcc tcattaatga aacaaatgcc cggtatggtg ctgatcaacc
    13381 gtatcctgcc tggctttgaa aaccgttgta ttgctcttga cgatcgttac ggtgcctggc
    13441 tggcaacgcg tcatttaatt cagcaaggtc atacccgcat tggttatctg tgctctaacc
    13501 actctatttc tgacgccgaa gatcgtctgc aagggtatta cgatgccctt gctgaaagtg
    13561 gtattgcggc caatgaccgg ctggtgacat ttggcgaacc agacgaaagc ggcggcgaac
    13621 aggcaatgac cgagcttttg ggacgaggaa gaaatttcac tgcggtagcc tgttataacg
    13681 attcaatggc ggcgggtgcg atgggcgttc tcaatgataa tggtattgat gtaccgggtg
    13741 agatttcgtt aattggcttt gatgatgtgc tggtgtcacg ctatgtgcgt ccgcgcctga
    13801 ccaccgtgcg ttacccaatc gtgacgatgg cgacccaggc tgccgaactg gctttggcgc
    13861 tggcggataa tcgccctctc ccggaaatca ctaatgtctt tagtccgacg ctggtacgtc
    13921 gtcattcagt gtcaactccg tcgctggagg caagtcatca tgcaaccagc gactaaccgc
    13981 agttaaagca attccagcgc cagtaattct tcgatggtct ggcgacggcg aatcaaccgc
    14041 gcctgaccat tatcaaacag aacttctggt aacagcgaac ggctattgta gttggatgac
    14101 attgatgcgc catatgcccc tgtatcatgc agtaccagat aatcacctgc cttcacttcc
    14161 ggcaaggcgc gggtttcaac atttccccct tcctgctggg taaagacatc gcccgattca
    14221 cataacggtc cggcgacgac ggtttccacc gttggcgcgt gttccagaga acgaccatca
    14281 gctgccaggg cactgatatg gtggtaacta ccgtacattg ccgggcgcat cagatcgttg
    14341 aacccggcat caaccagcac aaagtggcgg ctccccattt gtttgacgct ccgcacctga
    14401 gtaattaata cgccagactg cgctaccagg aagcgacccg gttcaatttc cagtttcaca
    14461 gggtggccca aatggcgggc gatttgctca cgcgcggcat tccacagacc ataataatgt
    14521 tcggtatcaa ccgcctcttc accctgttga taaggaacag aaagcccacc gcccgcagaa
    14581 atagcctgta aatcctgacc gaattcgatg acctgacgca ccatagcacc acacacctgt
    14641 tccagatggg cataatcaac gccagaacca atgtgcatgt gaatgccgac cagctgcaga
    14701 tgatgacgtt gtatcacgtc cagtgcggcg ggcagatcgg tgtaccagat accgtgcttg
    14761 ctgttttcgc caccggtatt ggttttttgg ctatgtccgt gaccaaaccc cggattaacg
    14821 cgcagccata cccgatgccc tggcgaaacc tggcccagtt ggtcgagcat atcaacagaa
    14881 cccgcattca ccggaatttg caattcactg acgcgttcaa gcgtcgcctg atcgataaca
    14941 tctgccgtaa aaacaatatc atcggggtgc gtttgcggat tgtaacccgc cgccaacgca
    15001 cgctctattt cgcctaacga gacggaatcc actttcacgc cctgctcacg cattaagcgc
    15061 aaaatatgaa tattggaaca ggctttctgt gcaaagcgca ccacatcaaa ctgtttcagc
    15121 gctgcaatct gccgacgaat aatttgcgca tcgtagaccc acaccgggca gccaaattca
    15181 gcgggcaaac gcagcagatt ttcggcggtg agatcggtat cggtgctgaa cagtgaatgt
    15241 ggcataacaa actccagata agtgcttttt tatgattacg ccacatcata aaaagaataa
    15301 aaaatatcga tttatgtcga gtctatgcaa aaatgatatg gattaccgga ttgcgagaga
    15361 gcgctaatgg ccgccgttaa cttacgtcat attgaaattt ttcatgcggt aatgaccgcc
    15421 ggaagcctga ctgaggcggc acacctgcta cacacctcac agccaaccgt cagccgcgaa
    15481 cttgcgcgct ttgagaaggt gatcgggctg aaattgtttg agcgcgtacg tgggcgatta
    15541 catcctaccg tgcaaggact gcgtctgttt gaagaagtgc aacgatcctg gtacggactg
    15601 gatcgaattg tcagcgctgc agaaagtctg cgcgagtttc gccagggaga actgtctatt
    15661 gcctgcctgc cggtcttttc gcaatctttt ttaccgcagc tcctgcaacc ctttctggca
    15721 cgttatcccg atgtcagctt aaatatcgtg ccccaggaat caccgctact tgaagagtgg
    15781 ctctcggccc agcgtcatga tttaggactc actgagacac tccatacgcc tgcgggaaca
    15841 gaacgtaccg aattactctc tttagatgaa gtgtgtgtgt tacctccggg tcatccgctg
    15901 gcggtaaaaa aggtattaac gccggatgat tttcagggtg agaactacat cagcctttcc
    15961 cgtactgaca gctatcgcca gttgctggat cagctattta ctgaacatca ggttaaacga
    16021 cgcatgatcg tagaaaccca cagcgccgcg tcaatctgcg caatggtacg ggcgggggta
    16081 ggtgtttcgg tggttaaccc gctcaccgca ctggattatg cggcaagcgg tttagtggtg
    16141 cggcggttca gtattgcggt tccgttcaca gtcagcctga tccgccccct gcaccgcccg
    16201 tcatcagcgc tggtgcaggc gtttagtgag catttacaag cggggttacc gaaactggtc
    16261 acttctcttg acgctatttt gtcgtcagct acgacagcat aaaagcgaca gcatcctcgg
    16321 catggatcgc cgcagtatca aacacaggca aaacactgcg ctcttctggc accagtaaac
    16381 caatttctgt gcagccaaaa atgacgccct gtgcgccctg ttctgcaagg cgagcaatca
    16441 cttgcgcata ataagcgcgt gacgcttcgg taaattgccc cagacacagt tcttcaaaaa
    16501 taatctgatt aattttcgcc cgttcatccg cttcaggaat aagacaattg atggaaaatt
    16561 gttccgtcag ccgcccgcga taaaaatcct gttccatggt gtaacgcgta cccagcagcg
    16621 ccacacgagt cattccggcc ccggtaattg cacgtccggt ggcatccgca atgtgtaaga
    16681 aaggcagagt gcaacgtgac tcaatggcat ccgccacttt atgcatcgta ttggtacata
    16741 acacaatacc ttctgcgccc gcccgctgta agccaagcgc cgcctcagcc agaatgtccc
    16801 cggttttatc ccattccccg cgacgctggc actcttctat ttcatgaaaa tcgacgctat
    16861 gtagcagcac ttgcgcagag tgaagcccac caagccgctg tttaatgcct tcatttatca
    16921 aacgatagta aggaatggtg gattcccagc tcattcctcc cagcaaacca attgttttca
    16981 ttcctctctc ctgatgtgtg ttaccgcaac aaggctgaat aaggaacgag acaaacgcct
    17041 caacggccaa gtgcccaatc tctattaacg aaaaaagggc cggatgtaca gcacatccgg
    17101 cccgtgaaat cagatgccga tatttctcaa cttctcgcct gccatcagtt tgcgttcgat
    17161 atgttccagc gtgacatttt tggtttccgg aatgagccag aaagtgatgc ccacaaacgc
    17221 aatgttcagc gcagtgtaga gccagaacgt accggcagcg ccaatgctgt cgagcagcgt
    17281 caggaaggtc gccgataatc atattcgaca cccagttcgt ggtggtcgaa caggtaatac
    17341 cgaaatcgcg gcatttcagc ggctgaattt cagagcacag gatccacacc actggcgcgg
    17401 cgctcatcgc ataaccggca atacacatca tcgtcatgcc aacagagagc caggacaatc
    17461 cactggaagc cgtaccgtta tcaaactgca tcaggcaata gcccagcacc agagtgccta
    17521 acgccatcac gctgaaacca attttcagag ccggtttacc cctgctttat ctaccgtaaa
    17581 caccgcaata aaggtggcga acataaaggt cagccctacg accagagtcg caatcatctg
    17641 ttgttctgtg gtcgtaaagc ccgccatttt gaagatacgc ggcgcgtagt acatgatgat
    17701 gttcataccg gtaaactgct gcatcgcctg caacaacata ccgagaaaca cagcacgacg
    17761 gacgttacgg ttgatcttaa acagtgccca accgccctgt tttaacttca ggctttcacg
    17821 aatttcgttg agttcttctc gcgctttttc cgacgtatcg cgcagcatac gcaatacttc
    17881 ttccgcctca atatgacgcc ccttttccgc caaccagcgc gggctatttg gcaggaagac
    17941 caccagaata atcagcagaa ctgctggtaa agcaagaacc cccaacattg cgcgccagtt
    18001 accgctataa ctgaacgctg tatcggataa aaacgccagc acgatgccga gtgtgaccat
    18061 caactggtac atactgatca tcttaccgcg aacgttttca cttgccattt cagaaagata
    18121 cagaggagcg gtgtaagacg cgatcccgac agcaatgccc agccccacac gagcggcgat
    18181 taacatctct acgctggtcg caaaagcgga ccctatagaa ccgagtacaa acaggatggc
    18241 ccccgccatc aggctgtatt tacgccccag gcggaacgac agccaaccat taaacagcgc
    18301 accaattgct gcgccgagca tcatgctact aaccacccat tcctgcaaat gactggtcag
    18361 cacaaagtga tcggtaatga acggcaacgc tccggcgatt acgccgatat caagaccaaa
    18421 taacaatcct gcgaccgcag cagctaccga aacaaacata ttcatacgcc gcgtatcccg
    18481 caaagaacgt ggcgttaaag cagattccgt attgatagta accatttttt cctgccagca
    18541 gagagtaaga catagtgaaa aaatacgtga acaactcacg caggtgtcag gtcggaaaca
    18601 gcataaatat ggattaaatt gctgcgacat gtcgttatgt gatggatatt ccaattttca
    18661 aattaagttg aattattgag attattatta accacctaat tttacagcag ataaaattca
    18721 taaagttcat taattgataa ttaatatgga ttatttcata accatgatat ggattatgat
    18781 gatctacagg tataaaaaac cctgccatgc ggcagggtca taaaagtaag aagaatgaat
    18841 taacgcgcca gccaaccgcc atccacggca atggtataac cattcacata atctgaagcg
    18901 ctggaggcaa ggaacactat cggccccatc aggtcactcg gcagtcccca acgaccagct
    18961 ggaatgcggt cgagaatttc cgcgctacgt tgttcatctg cccgtagttg ttgagtattg
    19021 ttggtcgcca tgtaacccgg agctatcgca ttaacattaa tgttgtgttt agcccattcg
    19081 ttcgccatca atcgcgtcac acccatcacg ccgctttttg atgcggtata agaaggcaca
    19141 cggatcccgc cctggaagga gagcattgac gcgatattga taatcttgcc gccattgcct
    19201 tgcgcgataa agtgtttcgc cgctgcctga gacatgaaga atacgctctt gatattcagg
    19261 ttcatgacat cgtcccagtc tttttcgctg aactcgagag cgtcttcgcg gcgaatcaat
    19321 ccggcgttat tcaccaggat atcaatatga ccaaattcag ctaccgcgcg atccagcagt
    19381 ccaggaatgc catcaatctt tcgcagatcg gcggtcaggc ttaaaaaacg acgccccagc
    19441 gccgtgacct gctcgatggt ttcagtcggt tcaacgatgt taatgccaac aatgtcacag
    19501 cccgcttgcg ccagccccaa cgccatcccc tggcccagcc aagtatcaca accagtgacg
    19561 accgcaactt taccttcgag agaaaatgca cttaaaatca taacaatacc ttattcgttt
    19621 atgcccacaa ctagcgcaaa tctttaacgg ccacatggtc catatcatca aagacctggt
    19681 tttcaccaac catgccccag ataaaggtat aagctttggt tccgacgccg gaatggatcg
    19741 accagctcgg ggagatcacc gcctgctcgt tatgcatcac aatgtgacgc gtttcttgcg
    19801 gttgccccat catgtggaaa acgcaggcgt catcatccat attgaaatag aaataaactt
    19861 ccatccggcg ctcgtgggtg tgacacggca tggtgttcca caagttacct ggagccagct
    19921 ccgtcagccc catactcaat tggcaggttt ccagcacatc cgggacaaaa tatttgttaa
    19981 tagtgcgacg gttactggtg aggttatcgc ctaacgtgac tggagatact tcgtccgggg
    20041 tgactttttt ggtgggatac gtcgtatgcg cgggtgcgca attgtaataa aactttgccg
    20101 gagtggcggt atcaatactg gcaaagacaa cttcttttgc acctttacca acatacaggg
    20161 cgtcgcggtg accgatttca tagcattggc catcgacagt aatcgtaccg gcaccgccaa
    20221 tattgataac acctaactcg cgacgttcaa ggaaatagct tacgccgagt tgtttaccaa
    20281 cttccccgcc aacggaaacc gttttagtta tcggcataat gccgccaaca ataattcggt
    20341 caatgtggct gtaaaccatg gtgtactcat cggcgacaaa taccttttca accaaaaatt
    20401 cattgtgcag cccttgggta tccagcgttt ttgcgtgcgc actgtggatg ctctgtctta
    20461 cgtccacatc aacctccgat aatcagtgaa gcgtgaaaat agaaaacgat agtgaaacac
    20521 tgtttcgttt tctctataaa gggatgatat gcccatgggc tagggttttc aattaaaaat
    20581 aaaacaatgt tttattttta agttaaggat taaaaaaagt gcagtgtcga tcacgaatat
    20641 gtcatgagaa tggaaaaatg agggagccca gaaaatgtat gtcgacttgc cagccatcat
    20701 tattcaacag attaatgacg gcagatattt atcggtaagg aggaaatgca gagctactcg
    20761 tcacgttcaa tggtcaatgc cacgccctgg cccccgccga tacaaagcgt tgccagccct
    20821 ttgcgggcat tacgtttcac catttcatga accagagaaa ccaggattcg gcaaccggaa
    20881 gcgcctatcg ggtgaccgag tgcgatcgcg ccaccattga cattgacccg acgctcatcc
    20941 cactcaagca tcttgccaac cgaaagcgcc tgtgcagcaa acgcttcatt agcctcgata
    21001 agatcgacat cagccaactg ccagcctaca cgctccaggc aacggcgggt cgcatacacc
    21061 ggcgcaattc ccatcaatgc cggatctaca ccaacgctgg caaatgcgcg gatgcgggcc
    21121 agcacgggta aattcaacgc tcgtgctttg gcttcgctca tcatcattac cgcagctgcg
    21181 ccatcgttta tggatgatgc attccccgcg gtcacagaac cgagactatc aaatgaagga
    21241 tttaaacggg ctaaaccttc tgcactggcg tcagtgcatg gctgttcatc ggtatcaaca
    21301 accaacgtct gaccgttact ttggatcatt accgggacga tctcatcttt aaatcgtccg
    21361 gcgtcaatcg ccgctcgcgc tttttgttgc gagctaagtg cgtaagcatc ctgcaactga
    21421 cggctgatgc catattcgcg agccagattt tcggcggtga caccaatatg ataatcattg
    21481 aaggcatccc acaacccatc atgcaccaga ctgtcaacca actggctatt gccaagctgt
    21541 gcaccggtgc ggctatcagt cagaacatgt ggtgcgcggc tcatgttttc ctggccaccg
    21601 gcgatgacaa tatcagcctc gccacactgt atcgcctgag tagccagatg cagtgcttta
    21661 agcccagaac cgcaaacgtc attaatagtg attgcagaaa cgctattagg aagaccacct
    21721 ttaatagccg attgccttgc cggattctgc cctgcccctg cagtcaacac ctgaccaaga
    21781 attacttcat ccaccgcata tgcaggaacg ccggtacgtt ctattaacgc tttcacgacc
    21841 aaactaccaa gttccacggc ggaatgaccc gctaacgcac cacgaaagca gccgataggt
    21901 gtccgtaacg ccccgacaat cacaacgtct ttcatcacaa cctcgcacca attaacagtg
    21961 caatagtaaa tgattgttaa ttacagttat cttaattgtt taaaaaaagt gatttttatc
    22021 acaaaagaaa tatgcctgag cagcagtcag agacataact ggcacgtaag gtttgcaacc
    22081 actaacccac caatagaggg gtagataggg cgttaatctc ccatacttaa cctggtttat
    22141 ggtaaattgc cctccatttt gtttaatttg tagatgatac gttcagataa tgtctaatat
    22201 ttggtctaaa gaagaaactc tgtggagttt cgcgctctac ggcacagccg ttggtgcagg
    22261 cacgctcttc cttcctattc agttaggttc ggcaggggct gtggtcctgt ttattactgc
    22321 tctggtcgcc tggcctttaa catattggcc acataaagct ttatgccagt tcatcctctc
    22381 atcgaaaaca tcagcaggtg aagggataac gggcgcggta acacactact atggcaagaa
    22441 gattggtaat ctgattacca cgctgtactt catcgccttt tttgtcgtcg tgttgatata
    22501 tgcagtggca attaccaact cacttacaga acagctggca aagcatatgg ttattgatct
    22561 tcgcatccgt atgttggtga gtctgggt
//
LOCUS       DADMIB010000059        22454 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.059, whole genome shotgun sequence.
ACCESSION   DADMIB010000059 DADMIB010000000
VERSION     DADMIB010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22454
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.059"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            41..232
                     /locus_tag="JNZ89_002091"
     CDS             41..232
                     /locus_tag="JNZ89_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8935975.1"
                     /translation="MKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGD
                     DDALKEILTHVTEATKKQH"
     gene            201..1307
                     /locus_tag="JNZ89_002092"
     CDS             201..1307
                     /locus_tag="JNZ89_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8935976.1"
                     /translation="MSPRPRKNSTDVAGLYEKFDRRTGRVYYQYKNPVTGKFHGLGTD
                     KGKAEKIASTANQRIAAAEAEYFMRKIDESPSATKRRGIRLKAWVDRYLKIQDTRLKN
                     GDIAATTHKEKTRMAAYLVSRLGNHPLKELEVRDFALILDEWLDKDMVSTARVNRGLW
                     VDIYKEAQHAGEVPPGWNPPEATRKPIPKVTRARLTMEDWQKIYNATPEKHFIRNAML
                     LAIVTGQRRDDICHMRFSDVWNEHLHITQGKTGMRLALPLTLRCDAIGITLKEVIDGC
                     RDRILSPYLIHSRHQKQPKPMSKDNLSDYFAKARDLAGIIPPAGKTPPTFHEQRSLSE
                     RLYRAQGIDTKTLLGHKVQATTDRYNDTRGQEWV"
     gene            1487..2281
                     /gene="potC"
                     /locus_tag="JNZ89_002093"
     CDS             1487..2281
                     /gene="potC"
                     /locus_tag="JNZ89_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HAY8935977.1"
                     /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
                     KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
                     VMISPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
                     AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI
                     YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK"
     gene            2278..3324
                     /gene="potD"
                     /locus_tag="JNZ89_002094"
     CDS             2278..3324
                     /gene="potD"
                     /locus_tag="JNZ89_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotD"
                     /protein_id="HAY8935978.1"
                     /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
                     QFTKETCIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
                     KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK
                     GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY
                     MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
                     FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS
                     SIYEEYYQKLKAGR"
     gene            complement(3480..4301)
                     /gene="cobB"
                     /locus_tag="JNZ89_002095"
     CDS             complement(3480..4301)
                     /gene="cobB"
                     /locus_tag="JNZ89_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HAY8935979.1"
                     /translation="MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL
                     VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP
                     KIQPNAAHLALAKLQEALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ
                     VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH
                     VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL"
     gene            complement(4317..5228)
                     /gene="nagK"
                     /locus_tag="JNZ89_002096"
     CDS             complement(4317..5228)
                     /gene="nagK"
                     /locus_tag="JNZ89_002096"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HAY8935980.1"
                     /translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC
                     ELVAEADQRFGCRGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL
                     DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRL
                     PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQQLQAPEIIALYNQG
                     DEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPV
                     ARVPRIERARHGDAGGMRGAAFLHLTD"
     gene            complement(5257..6501)
                     /gene="lolE"
                     /locus_tag="JNZ89_002097"
     CDS             complement(5257..6501)
                     /gene="lolE"
                     /locus_tag="JNZ89_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HAY8935981.1"
                     /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
                     LSAMNGFERELNNRILAVVPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTG
                     LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
                     KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG
                     SSVSGIALKMTDVFNANKLVRDAGEMTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
                     VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG
                     LIIGVVVSLQLTPIIERIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL
                     LASWYPARRASNIDPARVLSGQ"
     gene            complement(6501..7202)
                     /gene="lolD"
                     /locus_tag="JNZ89_002098"
     CDS             complement(6501..7202)
                     /gene="lolD"
                     /locus_tag="JNZ89_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309522.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HAY8935982.1"
                     /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS
                     GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
                     TALENVAMPLLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
                     VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
                     RDGRLTAELSLMGAE"
     gene            complement(7195..8394)
                     /gene="lolC"
                     /locus_tag="JNZ89_002099"
     CDS             complement(7195..8394)
                     /gene="lolC"
                     /locus_tag="JNZ89_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolC"
                     /protein_id="HAY8935983.1"
                     /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
                     LSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVAPITTGDVV
                     LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
                     QIRMMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGN
                     ITGWRLWLDEPLKVDSLSQQKLPEDSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA
                     VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMIFMVQGASAGIIGAILGAALGA
                     LLASQLNNLMPIIGVLLDGAALPMAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
                     AEALRYE"
     gene            8656..9729
                     /locus_tag="JNZ89_002100"
     CDS             8656..9729
                     /locus_tag="JNZ89_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HAY8935984.1"
                     /translation="MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFPHPLSEVLS
                     KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW
                     LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF
                     SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLR
                     RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSN
                     TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKL
                     SQRAFSDLLFSPPSLPAAVSYSR"
     gene            9857..13303
                     /gene="mfd"
                     /locus_tag="JNZ89_002101"
     CDS             9857..13303
                     /gene="mfd"
                     /locus_tag="JNZ89_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HAY8935985.1"
                     /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL
                     IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ
                     RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG
                     EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP
                     TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
                     PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW
                     PRVQLKTKHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE
                     GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKVRNLALICESDLL
                     GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY
                     LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
                     ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
                     LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
                     ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE
                     RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
                     REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
                     FHHQRFNVLVCTTIIETGIDIPTANTIIIERSDHFGLAQLHQLRGRVGRSHHQAYAWL
                     LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
                     SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
                     ASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIE
                     FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA
                     IA"
     gene            13447..14409
                     /gene="ldtC"
                     /locus_tag="JNZ89_002102"
     CDS             13447..14409
                     /gene="ldtC"
                     /locus_tag="JNZ89_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtC"
                     /protein_id="HAY8935986.1"
                     /translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGEN
                     KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE
                     GIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN
                     TRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI
                     RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI
                     TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL"
     gene            complement(14492..14749)
                     /gene="bhsA"
                     /locus_tag="JNZ89_002103"
     CDS             complement(14492..14749)
                     /gene="bhsA"
                     /locus_tag="JNZ89_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple stress resistance protein BhsA"
                     /protein_id="HAY8935987.1"
                     /translation="MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAG
                     TNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK"
     gene            14990..15622
                     /gene="comR"
                     /locus_tag="JNZ89_002104"
     CDS             14990..15622
                     /gene="comR"
                     /locus_tag="JNZ89_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family copper-responsive transcriptional
                     repressor ComR"
                     /protein_id="HAY8935988.1"
                     /translation="MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLAD
                     LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA
                     AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE
                     IPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK"
     gene            complement(15684..16223)
                     /locus_tag="JNZ89_002105"
     CDS             complement(15684..16223)
                     /locus_tag="JNZ89_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HAY8935989.1"
                     /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK
                     ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
                     LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD
                     PGTQIPLDSNGQLILNNKV"
     gene            complement(16450..17754)
                     /locus_tag="JNZ89_002106"
     CDS             complement(16450..17754)
                     /locus_tag="JNZ89_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HAY8935990.1"
                     /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
                     HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE
                     KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK
                     YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE
                     RILPALPPRISAAAHSELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI
                     KAPDFLKDIGGLETNRINQLVVEPTLQTTHDPDIYAIGDCASCTRPEGGFVPPRAQAA
                     HQMATCAMNNILAQINGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
                     ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
     gene            complement(18154..18696)
                     /locus_tag="JNZ89_002107"
     CDS             complement(18154..18696)
                     /locus_tag="JNZ89_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY8935991.1"
                     /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ
                     HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI
                     DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT
                     HKFKNISPHLQRIKAFKTLG"
     gene            complement(18719..19744)
                     /gene="nagZ"
                     /locus_tag="JNZ89_002108"
     CDS             complement(18719..19744)
                     /gene="nagZ"
                     /locus_tag="JNZ89_002108"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HAY8935992.1"
                     /translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE
                     LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGW
                     LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPEKALAIASRFIDGMHEAGMKT
                     TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSTLIRENKLDAIMPAHVIYSD
                     VDPRPASGSSYWLKTVLRQELCFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI
                     LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKASSTRLNQLHERW
                     QEEKAGH"
     gene            complement(19755..20579)
                     /gene="thiK"
                     /locus_tag="JNZ89_002109"
     CDS             complement(19755..20579)
                     /gene="thiK"
                     /locus_tag="JNZ89_002109"
                     /EC_number="2.7.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine kinase"
                     /protein_id="HAY8935993.1"
                     /translation="MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQ
                     RFVVRQPHDPDAPQSAFLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPD
                     TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP
                     LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDTALELAAVWVENTEQHRQLVNDYA
                     TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ"
     gene            complement(20563..21201)
                     /gene="lpoB"
                     /locus_tag="JNZ89_002110"
     CDS             complement(20563..21201)
                     /gene="lpoB"
                     /locus_tag="JNZ89_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HAY8935994.1"
                     /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ
                     PVPTVPSVPTIPQQPGPIEHEDRTAPPAPHIRHYDWNGAMQPIVSKMLGADGVTAGSV
                     LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT
                     RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQ"
     gene            complement(21215..21592)
                     /locus_tag="JNZ89_002111"
     CDS             complement(21215..21592)
                     /locus_tag="JNZ89_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HAY8935995.1"
                     /translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI
                     SAEKPVLSTSDIQPSASSTLYNERQKPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH
                     SAVTLYGSANFLGAHKVRLYLYL"
     gene            complement(21595..21954)
                     /gene="hinT"
                     /locus_tag="JNZ89_002112"
     CDS             complement(21595..21954)
                     /gene="hinT"
                     /locus_tag="JNZ89_002112"
                     /EC_number="3.9.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine nucleoside phosphoramidase"
                     /protein_id="HAY8935996.1"
                     /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP
                     NILIPTVNDVSAEHEQALGRMITVVAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
                     HLLGGRPLGPMLAHKGL"
BASE COUNT         5592 a         5894 c         5575 g         5393 t
ORIGIN      
        1 cgacgagtgg aaaccaaaac ggttcagtct cactaccctg gtgaaatacg gaaaactagg
       61 atacatcgtt ccaagaccac aaaaaattcg tgggcgttgg ctgatagatc gccgagcagt
      121 atttgttggg ccaggtgaaa cgggaattgc gccggaaatt catactggcg atgatgatgc
      181 actgaaggag attttaactc atgtcaccga ggccacgaaa aaacagcact gacgtagccg
      241 gtctttacga aaagtttgat cgcagaactg gcagagttta ctaccagtat aaaaatcctg
      301 tgactggaaa atttcacgga ctcggaacag acaaaggtaa ggcagaaaaa atcgcttcca
      361 cagccaatca gcgaatagct gcagcagaag ctgaatattt catgcgcaaa attgatgaaa
      421 gtccgtcagc aacaaaacgt cggggtatca gattaaaggc atgggttgat cgatatctga
      481 aaatacagga cacgcgactg aaaaatggag atattgcagc tacaactcac aaagaaaaaa
      541 ctcgaatggc tgcatacctg gtttcccgtc tgggaaacca cccattgaaa gaactggaag
      601 taagagactt tgcattaata ctggatgagt ggctggataa agacatggtc agcacagcga
      661 gagtaaatcg tggattatgg gttgatattt ataaagaagc acagcatgca ggggaagttc
      721 ctcctggatg gaatcctccg gaggctaccc gtaaaccgat ccctaaagta accagagcca
      781 ggctcaccat ggaagactgg caaaaaattt acaatgcaac gcctgaaaaa cactttatcc
      841 gtaacgcaat gcttcttgcg attgttactg gtcagcgccg tgatgacatt tgccacatgc
      901 gtttttcaga tgtgtggaac gaacacttgc atatcaccca gggaaaaacc ggaatgcgtc
      961 tggcgttacc gcttacacta cgctgtgatg ccattgggat aacgttaaaa gaagttattg
     1021 atgggtgccg agacagaata ttaagtccat atctaatcca tagtcggcac cagaaacaac
     1081 cgaagccgat gagtaaagac aacctgagcg actactttgc caaagcacgg gatctggctg
     1141 ggataattcc accagcagga aaaactccgc caacatttca tgaacaacgc tctctatcag
     1201 aacggctgta ccgtgcacag ggtatcgata caaaaacatt actaggacat aaagtccagg
     1261 caaccaccga tcgctataac gatactcgag gtcaggaatg ggtttaagct ggttatttga
     1321 caaacaccat atggaatatc cgtcaccatc tcaggaaaaa agtgttgtaa aatgcgtggc
     1381 ctagttttgg ggaaacgttt tggagagatt ttggagaaag gaaaaaattg aataaattca
     1441 aaatcctgaa agtgctccac cttatgaata agaaggtgga actcgaatga tcggtcgact
     1501 gcttcgcggc ggttttatga ccgctatcta cgcgtacctg tatatcccaa tcattatttt
     1561 gattgtgaac tcctttaaca gctcgcgctt tggcatcaac tggcagggtt ttaccaccaa
     1621 atggtatagc ctgctgatga acaacgacag cctgttacag gcagcgcagc attcactaac
     1681 aatggcggtg ttttcggcga cgtttgctac gcttatcggt tcactgacgg cagttgcgct
     1741 gtaccgttat cgctttcgcg gtaagccgtt cgttagcgga atgctgtttg tggtaatgat
     1801 atcaccagat atcgtgatgg caatttcgct gctggtgctg tttatgctgc tgggtattca
     1861 gcttggcttc tggtcgctgc tgttctcgca tatcaccttc tgcctgccat ttgtggtggt
     1921 gacggtgtat tcgcgcctga aaggttttga cgtgcggatg ctggaagcgg cgaaagatct
     1981 cggtgccagc gaatttacaa ttctgcgaaa aatcatactg ccactggcaa tgccagcggt
     2041 ggcagcgggc tgggtgttaa gctttaccct gtcgatggac gatgtggtag tttcttcgtt
     2101 cgtcaccgga ccaagttatg aaattctgcc gttaaaaatt tattcgatgg tcaaagtcgg
     2161 cgtatcgccg gaagttaacg cgctggcaac catattactg gtgctgtcgc tggtgatggt
     2221 tattgccagt cagcttattg ctcgtgataa aacgaaaggt aacacagggg acgttaaatg
     2281 aaaaaatggt cacgccacct gctcgcggcg ggtgctctgg cactgggcat gagcgccgct
     2341 cacgccgatg acaacaacac gctgtatttc tacaactgga ccgagtacgt gccgccagga
     2401 ctgcttgaac agttcaccaa agaaacctgt attaaggtta tctattcgac ttacgagtcg
     2461 aacgaaacca tgtacgccaa gctgaaaacg tacaaagacg gtgcgtatga cctggtggtt
     2521 ccttcaacct attacgtcga taaaatgcgt aaagaaggga tgatccagaa gatcgacaag
     2581 tcgaagttaa cgaacttcag caatctcgat ccagacatgc tcaacaagcc ttttgacccg
     2641 aataacgact actccattcc gtatatctgg ggggcgacgg cgattggtgt taacggtgat
     2701 gcggtggatc cgaaatctgt caccagctgg gccgatctgt ggaagccaga gtacaaaggc
     2761 agcctgctgt tgaccgacga tgcccgtgaa gtgttccaga tggcgctgcg taagctgggc
     2821 tattccggta acaccaccga tccgaaagag attgaagctg catataacga gctgaaaaaa
     2881 ctgatgccaa acgtcgcagc gtttaactcc gataacccgg ctaacccgta catggaaggc
     2941 gaagttaacc tcggcatgat ctggaacggt tctgctttcg ttgcacgcca ggcgggtacg
     3001 cctattgacg tggtgtggcc gaaagaaggc ggcatattct ggatggacag cctggcgatc
     3061 ccggcaaatg ccaaaaacaa agaaggcgcg ctgaaattga tcaacttcct gctgcgcccg
     3121 gatgtggcaa aacaggttgc tgaaactatc ggttatccaa cgccaaacct tgcggcgcgt
     3181 aagctgttaa gtccagaagt ggcgaacgat aaaacgctct acccggatgc tgaaaccatt
     3241 aaaaatggcg aatggcagaa tgacgttggc gcagccagca gcatttatga agagtattat
     3301 cagaagctga aagcaggacg ttaattcagc aagcgggcgg tggtattacc gcccgttttt
     3361 tatttagcaa ggatgtggct aatgagtcag gacagtagag ttttatccga ctctttcgtc
     3421 ggtattgtgg tccgctcgta ggcctgataa gcgtagcgca tcaggcaatg cttcctgctt
     3481 tataatccct tcagcaactt ttcaacaaac tcaggcacca cctggcttgc cgggccgtaa
     3541 tatttctcgg caaattcatt accgacctga cttggttcga gattcagttc cacggtgtgc
     3601 gcgccatgca gtttcgcttc gtgaacaaac ccagccgccg gataaacatg cccggaagta
     3661 ccaatggcaa tgaaaatatc agccatcgac aacgccatat aaatttcatc catgccgagt
     3721 ggcatttcgc caaaccaaac gacgtgcggg cgcaagggtg ccgggaactg gcaacaatgg
     3781 catttatctt ctggcgtaac gtctccggtc cagtcgagaa cctgaccact ttgcgaacaa
     3841 cgaactttca gcaattcccc atgcatatga atgacattgg tattacctgc gcgttcatgc
     3901 aggttgtcta tattctgcgt taccagcaaa aagcgatcgc cgagagcctc ttgcagttta
     3961 gccagcgcaa gatgcgcggc gttaggctga atttttggct gctgcagctg tcgacgacgg
     4021 gcgttataaa acgcttgcac cagttcagga tcgcgatcga aaccttccgg cgttgccaca
     4081 tcttcaaccc gatgttcttc ccacaggcca tctgcggcgc gaaaggtacg aatacctgat
     4141 tccgcagaaa ttcctgcccc tgtcagtacg agtactcttg gtttttccat tgcttccggc
     4201 accactttat ctctgaaaaa aatacgctga cgcaaacgct cgcgcaggcg gcgtttattt
     4261 ttacgaaaac gacttaaccg atgaccccga cgcgacagca tagcaacctc tgttgtttaa
     4321 tcggttagat gtaggaaggc cgcaccacgc attcctcccg catcaccgtg gcgcgcgcgt
     4381 tcaatgcgcg gaacacgagc tacaggtaag agatgacgag gcagcctgtc cgccagttgc
     4441 gttgtgattg ccgggaaatt cgataagcca ccaccaatga cgaccaggtc agggtcaaca
     4501 atggtcagga tatttcccag acaaaccgct aataaatcca gataacgctc aacgtgcgcc
     4561 cttgcctgct catcgccttg attataaagc gcaataattt cgggagcctg caactgttga
     4621 tgataatagt gttgatacag ccacgcaaaa ccgcgaccag acagataatt ctcaatgcag
     4681 ccatgctgac cacagccgca gcggcgtaac gggaaatcca accccatcat ggttaacgca
     4741 tcaaccggca gacgcatatg gccaaactcg ccggtaatgt agcttttacc ggtaatcggt
     4801 ttgccgttga aaatcagccc accgccaacg ccggtaccaa gaatcaaccc catcaccagt
     4861 ggatattgcg taaattcatc atcccaggct tctgaaaggg caaaacagtt ggcatcgtta
     4921 tcaaggcgta catcgcgatc aagacgtgcg ctcaggtcgg cacgcagcgg tttaccgctg
     4981 gcagcgggga cattggcggc atacagcgta ccatcttctg tttccggcat tcccggtata
     5041 ccaatgccga cagaacctct acagccaaaa cgttgatcag cttcggctac cagctcgcac
     5101 actgcatcta aaaatgcgtc atagctgtca cgcggtgtcg gcacccgctt ttcccactgc
     5161 aactgccgac cgctatcaaa cacgccaagc gcaatttttg ttccaccaat atcaaacccg
     5221 taatacattg ccgctccttg ttttaatgta ctgcctttac tggccgctaa ggactcgcgc
     5281 agggtcaata ttactggcgc gccgcgccgg ataccaactt gccaaaagac tcagcaacaa
     5341 tgctgtgacc agtacgtaga agacgtccag ccagtgcaat tccgatggca ggaagtcaat
     5401 aaaatagata tcgctggaga ggaactgatg accgatcagc ttttcaatcc gctcaataat
     5461 cggggtaagt tgcagtgaaa caactacgcc gataatcagc ccacacaggc tgccgaacag
     5521 ccctgccagc aatccatacc agacaaagat ggcgcgaatt aaaccatctt tcgcccccag
     5581 cgttcttaat actgcgatat cgccactctt atctttcacc gccatcacta aggtggagac
     5641 gatgttgaaa caggccacgc caatcaccag taccatcgcc agatacataa tggcgcggat
     5701 catctggata tcgcgataca tatagccgta agtaccaatc cagcttttaa tataaacata
     5761 gctgttggtc atttcacccg catcgcgtac cagcttattg gcgttgaaaa catccgtcat
     5821 tttaagggca atacctgaca cgctggaacc catatcaaga tattgttggg catccgccag
     5881 cgggatcatg gcaaaactgt gatcgagttg gccactcaac tgcaaaatac ccgcaacgtg
     5941 caaacgcaca cgttttggct gcatcagttt atgctcagga ttcgagttgg ggatcatgat
     6001 cgacacccaa tcgccctgct tcactttcag cgcatccgcc acgcctttgc cgatgataat
     6061 ttgctgttcg cccgctttaa aattgcgcca cgcatccccc tgaacaaacg agggtaatgc
     6121 gctcagacgc tgttcctgtt gtgggttaac gcccttcacc tggattgcgc gcagattcgc
     6181 tccactttcc accagcccgg tgaaattgat atacggcgca gcggcggcaa tacccggcac
     6241 tttctgcact ttatccagtg cttcctgcca gttagtccat ggctgattta ccgcttcgat
     6301 ttcaccatgc ggcaccaccg ccagaatgcg gttattcagt tcgcgttcaa agccgttcat
     6361 cgcgcttaag ccgacgatca ataccgccac accgagggca atgccaatgg tagaaatgac
     6421 ggagatcagc gacaccatgc cgccgcgccg ccgtccgcga ctaaaacgca ggccaattaa
     6481 taacgataaa ggcatcgcca ttactccgcc cccatcaggc tcagttccgc cgtcagacgt
     6541 ccatcacgca tttctaactg gcggctcata cgtttcgcca gttgcaggtc gtgagtaacc
     6601 accaggaagg cggtgccctg caagcgattc aattccccaa gcaactggaa gatgctgtcg
     6661 gcgttacgcg catcgaggtt accggtaggc tcatccgcca gtaccagacg cggattattg
     6721 accagcgcac gggcaatcgc tacacgctgg cgttcgccgc cagaaagttc agatgggcgg
     6781 tgattcgcac gatgctccag ccccaccgct tttaacatct ccagtgcacg gctgttgatt
     6841 tcagcgggct ttttcttgcc aatcagcagc ggcatagcca cgttttccag ggcggtaaaa
     6901 tccggcagca ggtggtgaaa ctgataaata aagcccagtt tctggttgcg cagttctgct
     6961 tttgctgccg acgacagttt gctcatcggt tgaccgttaa agatcacatc gccggaggtt
     7021 ggcgtatcca gtccgcccag caggtgcagc aaggtgcttt taccggaacc agagctaccg
     7081 acgatcgcca tcatttcacc ttcgccgacg ctgaaactga cattgtgcag tacatcggtt
     7141 tgcacactgc cttcctgata gcgtttgcac aggttgtcgc attgcaacag gatcttattc
     7201 ataacgtaaa gcctcagcgg gttgtgtggc ggcagcgcgc catgaagggt aaagcgtaga
     7261 cagcagcgcg atagccatcg ccaccagcgc aataacaatg acctgtaaag gttcgatagc
     7321 catcggcagc gccgcgccat caagcaggac gccgattatt ggcatcagat tatttaactg
     7381 gctggcaagc agtgcgccaa gcgccgctcc gaggatcgca ccgataatcc cggcgctggc
     7441 cccttgcacc ataaagatca tcatgatttg tcgcggagtt aagccttgcg tttgcaggat
     7501 cgctacttcg ccctgcttct ccatcaccat cagccccagc gaggtaataa tgttaaacgc
     7561 cgcaacggcg acaatcaggc tcagcagtaa acccatcata tttttttcca tgcgtacggc
     7621 ctggaacaac tcgcctttac gatcacgcca gtcctgccat ttgctgtctt caggcagttt
     7681 ttgctgactt aatgagtcga ctttcagcgg ctcatccagc cacaaacgcc agccggtaat
     7741 attgcctgcc ggataacgca tcagacgcga ggcatcctca atattcacca gcatttcatt
     7801 gccatcgact tcactgttgg cggcgaaagt gccaatcaca ttgaacaggc gctgacttgg
     7861 aatacgcccc atcggcgtga actggctggc agatggtacc atcatgcgga tttgatcacc
     7921 gcgattaacg cctagctgtg aggcaagttg ttcgccgagg atgacattat atttccccgg
     7981 ctcgaggtca gtttgtttca cattgaccag atacggcgtt agtggatctt tttgcgccgg
     8041 atcgataccc agcatcaccc cgaccgccac gctgcgcgcg ctttgcagta ccacatcacc
     8101 ggtagtaata ggtgcgacgc gattaacgcc gtccagtttg actgccgttt ccgggagttg
     8161 ctgcgggtta agagagccat gctcagaaga gagaattgcc tgtggcatca ggccaaggat
     8221 gttgttttgc agctcgcgct caaagccgtt catcactgac aatactgtga ccagcgccat
     8281 caccccgagg gtaatgccga tggtagaaag ccaggagacg aaacgaccga agcgatccgc
     8341 tgcacgccca cgcatgtaac gcaggccaat aaatagagcg acaggttggt acatgaaatc
     8401 cgtctggttg ctgtagcaaa gacacgagta tataagcgaa agcaagatgg gtaaacgtct
     8461 gaactgtaag tgatcgtcag ggctaatctg aaaagccccc gtaaatcaat cggctaaatt
     8521 gccatgtttt atcatcaatc ttgccgcctg atcttaatct gaaaaatcat ccaatacaga
     8581 cagataccca ttacacctcg ggtcataacc cgcaggatca accgcatgta aattaaaaaa
     8641 gagcgtgttg tcctgatgaa acaaaaagag ctatggatta accagatcaa agggttatgt
     8701 atttgtccgg tggtgattta tcactcggtc attacctttt atccgcatat gaccactttt
     8761 ccgcatccgt tatcggaagt cctgagcaaa tgctggatct atttcaatct ttaccttgca
     8821 ccctttcgta tgccggtttt tttctttata tccggctatt tgattcgccg ctatatcgac
     8881 agcgtaccgt ggggaaattg tctcgataaa cggatctgga acatcttctg ggtgctggcg
     8941 ctttggggcg tggtgcagtg gctggcgtta agtgcgctga accagtggct ggcacctgag
     9001 cgcgatttaa gcaatgcctc caatgccgct tatgccgatt ccaccggtga gttcctgcac
     9061 gggatgatca ccgccagcac cagcttgtgg tatctgtatg cgttaattgt ctatttcgtg
     9121 gtatgtaaaa tttttagccg tctggcgctg ccactattcg ccttgtttgt actgctgagt
     9181 gtggcggtta atttcgttcc cacgccgtgg tggggaatga acagtgtgat ccgcaatttg
     9241 ccttattaca gccttggcgc atggtttggc gcaacaataa tgacctgtgt taaagaggta
     9301 ccgttgcgcc gccatctgct gatggcttct ttgcttaccg ttctggcggt cggtgcctgg
     9361 ttgtttacta tctcgctgct gttgtcgctg gtatcgattg tggtgatcat gaagctgttt
     9421 tatcagtacg agcaacgatt cggtatgcgc tccaccagcc tgctgaatgt gattggctcc
     9481 aacaccattg ctatctacac cacccatcgc attctggttg aaatattcag cttaactctg
     9541 cttgcgcaaa tgaacgcagc acgctggtcg ccgcaagtcg aactgacact cctgctggtt
     9601 tatccctttg tcagtttgtt catctgtact gttgcgggct tgctggtaag aaaactttca
     9661 cagcgtgcat tcagcgatct gttgttctcc ccgccttcac tgcccgctgc cgtcagttac
     9721 tcccgctaag ccatcgcccc agccggggcg attcaatttg ctaaaccatg tcgattacgg
     9781 ataatgaaca gcattgctta tcagagatat gcccccatat gttgaggcat atcctaacga
     9841 gaatctgaca accgttatgc ctgaacaata tcgttatacg ctgcccgtca aagcgggtga
     9901 gcagcgtctg ctgggcgagt taaccggcgc agcctgtgca acgctggtag cggaaattgc
     9961 cgaacgtcac gccggtccgg tggtactcat tgcaccagat atgcaaaatg ctctgcgttt
    10021 gcatgatgaa atcagtcagt tcaccgatca gatggtgatg aatctggcgg actgggaaac
    10081 tcttccctac gacagctttt cgcctcatca ggacattatc tcctcgcgcc tttccaccct
    10141 ttaccagcta ccgacgatgc agcgtggcgt actgattgtt ccggtgaata cgcttatgca
    10201 gcgcgtttgc ccacacagtt ttctccacgg tcatgcgctg gtgatgaaaa aaggtcagcg
    10261 cctgtcacga gatgcattac gaacccaact ggacagcgcc ggttatcgcc atgttgacca
    10321 ggtgatggag cacggcgaat acgccacgcg cggcgcgttg ctggatctct tcccgatggg
    10381 gagtgagctg ccttatcgtc ttgatttctt tgatgatgaa atcgacagcc tgcgggtgtt
    10441 tgacgtcgac agccagcgca cgctggagga agtagaagcg atcaatctgc tgcccgcgca
    10501 cgaatttccg accgataaag cggcaattga actgttccgc agccagtggc gcgatacctt
    10561 cgaagtgaag cgcgatccgg aacatattta ccagcaagtg agtaaaggca cattacctgc
    10621 cgggatcgag tactggcagc cattgttctt cagcgaacca ctgccgccgc tgttcagtta
    10681 tttccctgcc aataccttgc tcgtgaatac tggcgatctg gaaaccagtg ccgaacgttt
    10741 ccaggctgac acgctggcgc gttttgagaa tcgcggcgtc gatccgatgc gcccgctgtt
    10801 gccaccacaa tcgctctggc tgcgggtgga cgagctcttc tcagagctga aaaactggcc
    10861 ccgggtgcag ctaaaaacta aacatttacc gacaaaagcc gcgaatgcca atttaggttt
    10921 ccagaaactg ccagacctag ccgttcaggc gcaacaaaaa gcgccgctgg atgcgctgcg
    10981 taagttcctc gagactttcg acggtccggt ggtgttctcg gtagaaagtg aaggtcgccg
    11041 tgaagcgctg ggtgaactgc tcgcacgaat taaaattgct ccgcaacgca ttatgcgtct
    11101 tgatgaagcc agcgaccgtg ggcgttatct gatgattggc gctgccgaac atggttttgt
    11161 cgataaggtg cgtaatctgg cgctgatctg cgaaagcgat ctgctcggtg aacgtgttgc
    11221 ccgccgtcgt caggattctc gccgcaccat caaccccgat acactgatcc gtaaccttgc
    11281 ggagctgcat attggtcagc cggtggtcca tctggagcac ggtgtcgggc gctatgccgg
    11341 aatgaccacg ctcgaagcgg gcggcattac tggcgagtat ttgatgctca cctatgccaa
    11401 cgacgccaaa ctgtatgttc cggtgtcgtc actgcatctg attagccgtt acgcaggtgg
    11461 cgcggaagaa aacgccccgc tgcataaact tggcggcgat gcgtggtcac gcgcgcggca
    11521 gaaagcggcg gaaaaagtgc gtgatgtggc ggcggaattg ctggatatct acgcgcaacg
    11581 cgccgccaaa gagggcttcg cgtttaaaca cgatcgtgag cagtatcagt tgttctgcga
    11641 cagcttcccg tttgaaacca cgccggatca ggcgcaggcc attaatgcgg tacttagcga
    11701 catgtgtcag ccgctggcaa tggatcgtct ggtgtgcggc gatgttggct ttggtaaaac
    11761 agaagtggcg atgcgcgccg ctttcctggc agtagataac cacaagcagg tggcggtgtt
    11821 ggtgcctacc acccttctcg cgcagcagca ttacgacaac ttccgcgacc gtttcgccaa
    11881 ctggccggta cgtatcgaaa tgatctcccg tttccgcagc gccaaagagc agacgcaaat
    11941 ccttgcggaa gtggcggaag ggaaaatcga tattctgatc ggtacgcaca aactgctgca
    12001 aagtgacgtc aagtttaaag atttaggcct gctgattgtc gatgaagaac accgcttcgg
    12061 ggtgcgtcat aaagagcgca ttaaagcgat gcgcgcgaac gtggatattc tgacgcttac
    12121 tgcaacgccg atcccacgca cgctgaatat ggcaatgagc ggaatgcgtg acctgtcgat
    12181 tatcgccacg ccgcccgccc gtcgtctggc agttaaaacc tttgtccgtg agtatgacag
    12241 cctggtggtc cgggaggcga tcctgcgtga aattttgcgc ggggggcagg tttattatct
    12301 ctacaatgat gtggaaaaca tccagaaagc tgccgaacgg ctggcagaac tggtgccaga
    12361 agcgcggatc gccatcggtc acgggcagat gcgcgagcgc gaactggaac gggtgatgaa
    12421 tgatttccat catcaacgtt tcaacgtgct ggtttgtaca accattatcg aaaccgggat
    12481 cgacatcccg acagccaaca ccattatcat tgaacgctcg gatcacttcg gtctggcgca
    12541 gctgcaccag ttacgcggtc gcgtcggacg ttcacatcat caggcatatg catggctgct
    12601 gacgccgcat ccaaaagcga tgactaccga tgcacaaaaa cgtcttgaag cgattgcctc
    12661 gctggaagat ctcggtgcag gctttgcgct ggcaacgcac gatctggaga tccgcggcgc
    12721 gggtgaactg cttggcgaag aacaaagtgg ctcaatggaa accatcggtt tctcgctgta
    12781 tatggagttg ctggaaaacg ccgtcgatgc actgaaagcc ggacgcgagc cgtcgctgga
    12841 agatctcacc agccagcaaa cagaagtcga gctgcggatg ccgtcgctat tgccagatga
    12901 tttcattcct gacgtgaata cgcgtttgtc gttctataaa cgtattgcca gcgccaaaac
    12961 ggaaaacgaa ctggaagaga tcaaagtcga gcttatcgat cgcttcggcc tgctgccgga
    13021 tccggcgcgt accctgctgg atgttgcccg tctgcgccag caagcgcaga aactggggat
    13081 caggaagctg gaaggtaatg agaaaggcgg ggtgatcgaa tttgccgaga agaatcacgt
    13141 taatccggcc tggttgattg gtttgctgca aaaacagccg cagcattacc gccttgatgg
    13201 tccgacgcgc ctgaaattta ttcaggattt gagtgagcgg aaaacgcgta tcgaatgggt
    13261 acgccagttt atgcgtgaac tggaagagaa cgcgatcgct taatggtaaa tcgggggcgt
    13321 ttctgcgccc ccatcggcaa catttacaaa ttctttgcac ttccctgcac tatccgacac
    13381 tgtcaccatc cataattcag gcttatctgt ttattacaat aaccttatat ttattatgga
    13441 tttttggtga tgatcaaaac gcgtttttct cgctggctaa cgttttttac gttcgccgct
    13501 gccgtggcgc tggcgctacc ggcaaaagcc aacacctggc cgctgccgcc agcgggcagt
    13561 cgtctggttg gcgaaaacaa atttcatgtg gtggaaaatg acggtggttc tctggaagcc
    13621 atcgccaaaa aatataacgt cggctttctc gctctgttac aggctaaccc cggcgttgat
    13681 ccttacgtac cgcgcgcggg cagcgtgtta acgatcccgt tgcaaaccct acttccagac
    13741 gcgccgcgcg aaggcattgt gatcaacatt gcggagctgc gtctctatta ctacccgccg
    13801 ggtaaaaatt cggtaaccgt gtatccaata ggtattggtc agttaggtgg tgacacgctg
    13861 acaccgacaa tggtgaccac cgtttcagac aaacgtgcaa acccaacctg gacgccaacg
    13921 gcaaacaccc gcgcccgtta taaagcacag ggaattgagt tgcctgcggt agtgccggct
    13981 ggaccggata acccaatggg ccatcatgcg attcgtctgg cggcctatgg cggcgtttat
    14041 ttgcttcatg gtacgaacgc cgatttcggc attggcatgc gggtaagttc tggctgtatt
    14101 cgtctgcggg atgacgatat caaaacactc tttagccagg tcaccccagg caccaaagtg
    14161 aatatcatca acactccgat aaaagtctct gccgaaccaa acggtgcgcg tctggttgaa
    14221 gtacatcagc cgctgtcaga gaagattgat gacgatccgc agctgctgcc aattacgctg
    14281 aatagcgcaa tgcaatcatt taaagatgca gcacaaactg acgctgaagt gatgcaacat
    14341 gtgatggatg tccgttccgg gatgccggtg gatgtccgcc gtcatcaagt gagcccacaa
    14401 actctgtaaa tcctggataa aaaaaatccc cgcgacacgg catgtcgcgg ggaaaaaatc
    14461 agcagtagca ggcattaatg agggttaatg cttatttata aattactgct gttccatgga
    14521 gggtattcgg accggttaca gaagtaatac ggaaagattt tgcacccatc tcatccgctt
    14581 tttgcgccag ctgctcttcc agcgatccca gatttgtccc cgctttagca ctgattgtac
    14641 cgactttttg ttggccttct ggcgttgact gaacttcgac agccgcaaag ctggcaaatg
    14701 acatggagct taaaatcgcc gcagcgatga gggtttttac gtttttcata atagtggcct
    14761 tatgcagatg aatgacgtcg caagcaatta cttaacgatc gataactaaa tgacagatgt
    14821 gatctggatc acatacaaga tattttttat aacaatcatt aattaattta aaaatcttta
    14881 aatttcagtt aaatagaaag caattatttt tatgggatct ggactggtga acggaggtga
    14941 ttatttttat aataatcttt cattcacagt caccaggtac aacggcatca tggcaactga
    15001 ctcaacacaa tgtgtaaaaa aaagccgtgg ccgcccaaaa gtgttcgaca gggatgccgc
    15061 gcttgataag gccatgaaat tgttctggca acacggttat gaagcgactt ctcttgcgga
    15121 cctcgtcgaa gcgaccggag ccaaagcgcc cacgctatac gcggaattta ccaacaaaga
    15181 ggggttattt cgtgccgttc tcgaccgcta tatcgatcgt tttgccgcta agcatgaagc
    15241 acagctgttt tgtgaagaga aaagcgtgga gtctgcgctg gctgactatt ttgctgccat
    15301 cgccaactgc tttaccagca aagacacccc ggcaggctgc ttcatgatca acaactgcac
    15361 caccctctcc ccagattcag gagatatcgc caatacgttg aaatcacgcc atgcgatgca
    15421 agagcgcact ttgcagcagt ttttatgtca acgacaagcg cgcggggaaa tcccgaccca
    15481 ctgtgacgtg acacatctgg cagaattcct taattgtatt attcagggga tgtcgatcag
    15541 cgcacgcgaa ggtgcatcgc tggaaaaact aatgcagatt gccggaacga ctttgcgttt
    15601 atggcccgaa ctggtgaaat aagtcgcaaa aaaagcccct cagcctgagc gaatgagggg
    15661 ccaaattgca gagtacagcc ttgttatact ttgttattca aaatcagttg cccattacta
    15721 tctagcggga tctgcgtacc cggatcgcgg tccatgcgga ttttgccctg ctgatcgcca
    15781 atcttatagg tcacatcata accgagcatt ttttctgact tgtcatacac cgttttacaa
    15841 cgctgttgcg tagtcgtgta agtatcgctt tcctggagag agccctggat ctggttaccg
    15901 gcatatccac cacccagcgc ccccacaaca gtggcgacat ctttaccgcg accaccgcca
    15961 aactgatgcc ctatcacgcc gccagcaaca gcgccgagca ccgacccggt aatgcgattt
    16021 tcatcctgca ccggtcgacg atgggtcact gtgacgttgc gacactcctg acgcggtgtt
    16081 ttaaccgttt ccttgattgg ggttgcagaa acaacctgag cgtattgcgg gccacgttca
    16141 aacacgttca gactggccac tgccgctacg cccagcgcag ctgcgacacc aatcccgata
    16201 cccgccaaca ttgatttatt cacgggaaca cctccttctt tgcagttatg ccaatcatgc
    16261 aagcgaagga gaaaagcagc tatcagacag aagatgaaaa gcgcgggaat ggctggaaat
    16321 acttaatgat tcggaggagt ctgaaggaat gcctgatgcg acgcttaacg cgtcttatca
    16381 ggcctaccgc tcgtaccatt tgtccagggc ggatgaggcg tttatgccac atccgccagt
    16441 gtacgtcgat taatgcaact tcaaacgcgg acggataacg cggttaatac tccccaccag
    16501 catcattaat ccggttttaa agtaaccatg cagcgcaatc tgatgcattc ggtatagcga
    16561 gatatataca aagcgcgcaa ttcgtccttc aatcatcatt gagccgcgcg tcaagttacc
    16621 catcaggcta ccaacggtgg agaagttcga cagcgatacc agtgaaccat gatctttata
    16681 ctgataattt ttcagcggct taccgtttat ctgcgccaga atattgttca ttgcgcaagt
    16741 cgccatctgg tgtgcagcct gagcacgcgg tggaacaaag cccccttccg gacgcgtgca
    16801 tgacgcgcag tcgccaatag cgtaaatgtc tggatcgtgg gtggtttgca gcgtcggttc
    16861 caccaccagc tggttgatac ggttagtttc aagaccaccg atatctttca ggaagtctgg
    16921 cgctttgatc ccggctgccc acaccatcag atcagcctca atatattcac catctttagt
    16981 gtgcaggccg ccttcatcag cactggtgac catggtttgc gtcagcacgc gaacgccaag
    17041 tttcgttaac tcactatggg ccgcagcaga gatgcgtggc ggtaatgcag gcaaaatacg
    17101 ttctcccgct tctactagcg ttacgttcag ggcttcgttg gtcagacctt tataaccgta
    17161 gctgtgcagt tgcttgaccg cgttatgcaa ctcagcggag agttctacac ccgtcgcgcc
    17221 gccaccgaca atcgcaatgt tcactttgcc attcgcgccc aggttggcgg agtatttcag
    17281 gaacagattc agcatctcct ggtggaagcg acgcgcctgg tgcgggttat cgaggaaaat
    17341 gcagttctct ttgacgcctg gcgtattgaa atcgttagag gtgctaccca gcgccatgac
    17401 cagggtgtca taggcgattt tacgttccgg aaccagcagt tcacctttct cgtcgcgtag
    17461 ttctgcaata gtgattgttt tcgcttcacg atcaatatca atgacggaac ccaactggaa
    17521 ctggaaacca tgattgcgcg catgggccag atagctcaac gcatcgacgc cttcatcaag
    17581 cgagccagtc gccacttcgt gcagcagcgg tttccacagg tggctgtggt tacgatcgac
    17641 cagcgtaatt ttggcttttt tcttacgtcc cagcttatgc cccagctgtg ttgccatttc
    17701 cagcccacca gcaccgccgc cgacaatcac aatctttttc aatggcgtag tcaacgtgac
    17761 ccccttgaat ttattaacca attgttaatt aatggttatt aacatagctc ttaattaaca
    17821 acaggttaca gcaatgaaaa tgttcttcgc tattgagaat aacatgaatg gtgcattggt
    17881 cataccaaaa ttgatgttaa tcaagttttg ttgctgaaaa gataggcgac tttaccgggt
    17941 gagatcaaaa aatagagttt attgtttatt atttgagcga atttgtgaga gtgatataga
    18001 gtgaggggtg tatgcagggc gttcggtagg cctgataaga ggcgcatcag gcattgatgc
    18061 tcgactgtcg gatgcggcgt aaacgcctta tccgacttac agaattcgga gcgcatcagg
    18121 taccggcaag gttacctgat gcgacgaggg catttacccg agggttttga acgctttaat
    18181 gcgctgcaaa tgcggggaga tattcttgaa tttgtgcgtc tgctcttcgt cccagacaat
    18241 ctcgtaataa tgatgcaact cttcagatgt ccgctggctg ttaagcgctt catcattacg
    18301 cgacaaaatc accaggcaac gatcgcgatt cttctcgcgg aagttggtca cacacttagt
    18361 ggcaatatcg gcatactctt ccgggcgatc aatcttgcct tccatgttct cataagggaa
    18421 caaattaggg ttgaagatca cctggcggat atcgcaaaga aaaccaatcc gttccgccca
    18481 gtatccgccc agaccaacgc cgcaaatcag cggacgctcg tcgacgttca gttgcaacat
    18541 tttgtccact tctttaagca gatgctgcat atcatgtttc ggatgccgcg tactgtagct
    18601 tatcaagcgt acatccgggt caataaactg caattgtaag actttctcgt ggttacccgg
    18661 actgttagag tcaaaaccgt gtaaatagat aatcatcgct tcctcacata agccagggtt
    18721 agtgacctgc tttctcttcc tgccagcgtt catgtaactg attcagacgg gtgctgctcg
    18781 ccttccagcg agccgagtcc atcagttcct gtcgcgaaaa tgaaccttta tgatacaaac
    18841 gtgtaacacg ttctgccttg atcggtgaca gattatctaa cacgctgacg gcccctttac
    18901 gattattgca gaccaggatc atatcgcaac ctgcgtccag tgatgcctgc ccgcgttcgg
    18961 cataactgcc cataatcgcg gcaccttcca tcgataaatc gtcagagaaa attacaccgt
    19021 caaaacacag ttcctgacgc aaaacggttt tcagccagta agaagaaccg ctcgccggac
    19081 gcggatcaac atcactgtag atcacatgcg caggcataat ggcgtcgagt ttattttcgc
    19141 ggattaacgt gctgaaaacc gacatatctt tggcacgaat ttccgcttgc gggcgtgggt
    19201 cgcacggcgt ctctttgtgt gaatctgcag ttactgcacc gtgtcctggg aagtgtttcc
    19261 cggtcgtttt cattccggct tcatgcatcc catcaataaa ccgactagcg attgccaggg
    19321 ctttttctgg gtcggcatga taagaacgct cgccaatcgc cgcgctgata tgtcctacat
    19381 ccagcactgg cgcaaagctg atatcaatat ccatagcgat catttcgctg gccatcagcc
    19441 aacccgcctc ttgcgccagt ttgccgccct cttccattcc caacagcgca gcaaaggatt
    19501 gtgctgccgg taagcgggta aaaccttcgc gaaaacgctg cacgcgtcca ccttcctgat
    19561 ctaccgccac caccagatga ttgcgcgatg ctgcgcggat ctggcgcacc agttcacgta
    19621 actgggcagg atcatgatag ttacgcgtaa agagaatcag ccctcccacc agcggatgcg
    19681 ccagtatttc acgctcttcc gcgtccagtt cataaccttc gacatccaac attactggac
    19741 ccacactgct ctccttattg ttttattaat agctgccgcc aggtgtcatc ggccagcctg
    19801 ataaattgtt gatcgccggt ttgtcgccag cggtactcaa accaccctgc tttgagcatc
    19861 agcagccagg gaaaccatcg cctgacctga cgccataatt gcgccggata aatcttcgcg
    19921 cgagtggcat agtcattgac caattgccgg tgctgttcag tattttccac ccacaccgcc
    19981 gccagttcca gcgcggtatc accatctccg gcatactccc agtcgatgag ttttaaccct
    20041 gatgcgctat gcactaaatt tccggcgtgg acatccatat gcaatggact taagcgtaaa
    20101 ggtcgtggtt cccgcgcttt gcgcagacgt tttaacattc gcagccaacc cacagtccgc
    20161 cgcgccggat cgctttgctg ccagtacagt tccagtaacg gcaacagcgt tattcgccag
    20221 ccaaaacgtg gttgttgatg tagataatac agcaagcctg ccagttcgtt ggtatccggc
    20281 aaatacgttt ttaccgcgcc gggcagatag tcgactacca tccagtcacg gagatataaa
    20341 tgcggcttcg gtgcaatgct tgcgggtagt tgtgataaag cccgatactg gcgcaagaac
    20401 gcggactgcg gcgcatcagg atcgtgcggc tgacgcacaa caaaacgctg gccctgatgt
    20461 tcaatgagaa aactaccgcc actaagccca ctattaaacg tcgtgacggg atgaaactgc
    20521 gggaaaaagc gcgacagcaa ttcgtcgcgc gtgatgggat tattactgcg aaacggcacc
    20581 tttacctgac cagataattt cgcccgtctg caccagcatc agctgcattt gtagggtcgg
    20641 agcgttaacg ttgccagagg cgctggagta cagcacgtaa tgagcgccga cattgcgggc
    20701 aatgcctatg gctttactac gggtgcctaa actgtcctgc ggcgacaaac ctaactgttg
    20761 cttagccatc gacagttgct gggcggaaac cagggtaaat ttcccgttat tagccagcgc
    20821 atttcgcagc gtttcggtcg cttctgcggc attcagcgaa ccgttagtac ggttgttaac
    20881 gctatcaacc agcaggacgc tacccgcagt caccccgtca gccccaagca tcttactgac
    20941 tatcggctgc attgcgccat tccagtcata atggcgaata tgcggcgcag gcggtgccgt
    21001 tcgatcttcg tgctcaattg ggcctggctg ctgcgggatc gtcggcaccg agggcactgt
    21061 ggggacaggc tgttgtggct cggctggttg ttccggcgct ggtttcactt cttctaccgg
    21121 tgcaggttca cgttgcccca cacacccggc gagaaacatc gccagcgcgg taatcaaggc
    21181 gtagcgactc atttttgtca tcaagattca ccccttacaa atatagataa agtctgactt
    21241 tgtgcgcccc cagaaaattg gcgctgccgt acagcgttac cgccgaatgt gcgggaatgg
    21301 taacgctgcg tggcctttcc agaggatgca tctccagccc tctggcgtca taccagtaaa
    21361 aacgataatg aacggtaacg ggtttttgcc tttcgttata aagcgttgag gatgctgaag
    21421 gttgaatatc agacgtcgaa aggacgggct tttctgcact gatgcccgca gccaataaag
    21481 atgactccat caccagcgat tgctcatcat tcaccggaat ttccggatgt gaacgacagc
    21541 ccaccagcag taacaacacc agagacacca gcccaaagca tccttttctc atcgttacag
    21601 acctttatgc gccagcattg gtcccagcgg acggccaccc aacaagtgca tatggatgtg
    21661 gtaaacctct tgtccgccat ggcggttggt attcatgatc agacgatagc catcttcggc
    21721 aataccttct tgctcagcaa tttttgccac tacggtgatc atgcgtccca gcgcctgctc
    21781 atgctcagct gagacgtcgt tcacagtcgg aatgaggata ttcggaatga tcagaatatg
    21841 cgttggcgct tgcggcgaaa tatcgcgaaa cgccgttacc agatcatcct ggtagacgat
    21901 atcggagggg atctcacgac gaataatttt gctgaatata gtttcttctg ccacgacatt
    21961 ttcctttttc aaatagccat gcgttgcgcc atgctacgcc gcgccacact gcgagtatag
    22021 agtatggtcg agttaaacct gctctttcaa ccttaactca cgatttctta agcaaaaaat
    22081 cgttttgctg ccgtatatat cgccattatt cccatttctg cctgcgaatg cgctgaaaag
    22141 acattctctg tttggtttac acgacaaata tgaatgcgta tatttctcat ttgcatttac
    22201 aaacaaaatt attcgcacac taaatataat cgctcatcac cctcctccgg catgagcctg
    22261 acgacaacat aaaccatgag atttcaaatg ctttcaacac aatttaacag ggataatcaa
    22321 tatcaagcca tcaccaaacc gtcactactt gccggttgca tagcactggc actattacct
    22381 tctgccgctt ttgctgcatc agccactgaa gaaacggtga ttgttgaggg ttcagccaca
    22441 gctccagatg atgg
//
LOCUS       DADMIB010000060        22245 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.060, whole genome shotgun sequence.
ACCESSION   DADMIB010000060 DADMIB010000000
VERSION     DADMIB010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22245)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22245)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22245
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.060"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1298
                     /locus_tag="JNZ89_002113"
     CDS             <1..1298
                     /locus_tag="JNZ89_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HAY8935997.1"
                     /translation="WLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPY
                     VRILTQDEIDVRIKRFWRYLDGTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNL
                     TFIYDPEIPPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGG
                     GSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLV
                     KEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVA
                     NTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPIIHLQTVAPHHAYYYSGI
                     SDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYR
                     AEGSRTNTTWLGEEATRNTRILERQPRVISHEQQMRFSQ"
     gene            1270..2133
                     /gene="yjjW"
                     /locus_tag="JNZ89_002114"
     CDS             1270..2133
                     /gene="yjjW"
                     /locus_tag="JNZ89_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjW family glycine radical enzyme activase"
                     /protein_id="HAY8935998.1"
                     /translation="MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTM
                     GRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEV
                     LSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETG
                     WEKLLPVCDGAMLDLKAWGSECHQHLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQ
                     VDYLHHIDELATFIKRLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRG
                     VSRLIFPALYL"
     gene            complement(2347..3129)
                     /locus_tag="JNZ89_002115"
     CDS             complement(2347..3129)
                     /locus_tag="JNZ89_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313363.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY8935999.1"
                     /translation="MICRFIDTHCHFDFLPFSGDEEASLQRAAQAGVGKIIVPATEAE
                     NFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEVGLDL
                     FGDDPQLERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFS
                     GSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQG
                     QPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG"
     gene            complement(3126..4199)
                     /locus_tag="JNZ89_002116"
     CDS             complement(3126..4199)
                     /locus_tag="JNZ89_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HAY8936000.1"
                     /translation="MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLD
                     EFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGN
                     LIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
                     RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQ
                     WFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIAL
                     GSRIPALREDYKLGRLCGCYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVAND
                     TLVAEVIDAPQANDPTFNNEDLA"
     gene            complement(4321..4482)
                     /locus_tag="JNZ89_002117"
     CDS             complement(4321..4482)
                     /locus_tag="JNZ89_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HAY8936001.1"
                     /translation="MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLV
                     SLFMGRKRP"
     gene            complement(4609..5214)
                     /gene="osmY"
                     /locus_tag="JNZ89_002118"
                     /pseudo
     CDS             complement(4609..5214)
                     /gene="osmY"
                     /locus_tag="JNZ89_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418793.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone OsmY"
     gene            complement(5607..7196)
                     /gene="prfC"
                     /locus_tag="JNZ89_002119"
     CDS             complement(5607..7196)
                     /gene="prfC"
                     /locus_tag="JNZ89_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HAY8936002.1"
                     /translation="MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAG
                     TVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRT
                     LTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVEN
                     ELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAA
                     VGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWA
                     PAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQV
                     RTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPN
                     FAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVV
                     SRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSM
                     VNLRLAQERYPDVQFHQTREH"
     gene            complement(7287..7964)
                     /gene="yjjG"
                     /locus_tag="JNZ89_002120"
     CDS             complement(7287..7964)
                     /gene="yjjG"
                     /locus_tag="JNZ89_002120"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HAY8936003.1"
                     /translation="MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQA
                     VNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVS
                     LLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGIAKPNKKIFDYAL
                     ELAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHLEQPEGIAPTWTVSSLHEL
                     EQLLCKH"
     gene            complement(7979..8425)
                     /gene="rimI"
                     /locus_tag="JNZ89_002121"
     CDS             complement(7979..8425)
                     /gene="rimI"
                     /locus_tag="JNZ89_002121"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HAY8936004.1"
                     /translation="MNTISSLETTDLPAAYHIEQRAHAFPWSEKNFASNQGERYLNFQ
                     LTQNGKMAAFAITQVVLDEATLFNIVVDPDYQRQGLGRVLLKHLIDELEKRGVATLWL
                     EVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM"
     gene            complement(8394..8807)
                     /gene="holD"
                     /locus_tag="JNZ89_002122"
     CDS             complement(8394..8807)
                     /gene="holD"
                     /locus_tag="JNZ89_002122"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HAY8936005.1"
                     /translation="MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVAN
                     DLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQ
                     VASPALTELRANPTARAALWQQICTYEHDFFPRND"
     gene            8910..9941
                     /gene="rsmC"
                     /locus_tag="JNZ89_002123"
     CDS             8910..9941
                     /gene="rsmC"
                     /locus_tag="JNZ89_002123"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HAY8936006.1"
                     /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRA
                     HTQQFHHWQVLSRQMGDNARFSLVATVDDVADCDTLIYYWPKNKPEAQFQLMNLLSLL
                     PVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWG
                     EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS
                     PKIRLTLCDVSAPAVEASRATLAANCVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ
                     TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRA
                     IMTRQAKKG"
     gene            10209..10295
                     /locus_tag="JNZ89_002124"
     tRNA            10209..10295
                     /locus_tag="JNZ89_002124"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10243..10245,aa:Leu,seq:cag)
     gene            10331..10417
                     /locus_tag="JNZ89_002125"
     tRNA            10331..10417
                     /locus_tag="JNZ89_002125"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10365..10367,aa:Leu,seq:cag)
     gene            complement(10456..10692)
                     /locus_tag="JNZ89_002126"
     CDS             complement(10456..10692)
                     /locus_tag="JNZ89_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1435 domain-containing protein"
                     /protein_id="HAY8936007.1"
                     /translation="MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTP
                     VMLYHKQLRHYVLLPSCLALIAAIMLMIMNLNQG"
     gene            10833..11621
                     /gene="fhuF"
                     /locus_tag="JNZ89_002127"
     CDS             10833..11621
                     /gene="fhuF"
                     /locus_tag="JNZ89_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-iron reductase FhuF"
                     /protein_id="HAY8936008.1"
                     /translation="MAYRSAPLYEDIIWRTHLQPQDAGLAQAVRATIAKHREHLLEFI
                     RLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGL
                     MVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETL
                     ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEK
                     TLTNGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
     gene            complement(11659..12335)
                     /gene="bglJ"
                     /locus_tag="JNZ89_002128"
                     /pseudo
     CDS             complement(11659..12335)
                     /gene="bglJ"
                     /locus_tag="JNZ89_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418786.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator BglJ"
     gene            complement(12293..13018)
                     /locus_tag="JNZ89_002129"
     CDS             complement(12293..13018)
                     /locus_tag="JNZ89_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY8936009.1"
                     /translation="MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDL
                     TLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLM
                     CPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMNETHDFSYRSVILTLSERK
                     VLRLLGKGWGINQIVSLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN
                     LPSVYGDAAEWNTAELRREMSHS"
     gene            13637..14407
                     /locus_tag="JNZ89_002130"
     CDS             13637..14407
                     /locus_tag="JNZ89_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HAY8936010.1"
                     /translation="MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMD
                     SVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV
                     EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAIITFFASTAAMYIRQLLAQ
                     HHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMF
                     KGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV"
     gene            14398..14871
                     /locus_tag="JNZ89_002131"
     CDS             14398..14871
                     /locus_tag="JNZ89_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418783.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter"
                     /protein_id="HAY8936011.1"
                     /translation="MGVIEFLFALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAI
                     GHGSRMILMTRGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
                     YTAMISAVKISQLGYSEPLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV"
     gene            14979..15518
                     /gene="dnaT"
                     /locus_tag="JNZ89_002132"
     CDS             14979..15518
                     /gene="dnaT"
                     /locus_tag="JNZ89_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaT"
                     /protein_id="HAY8936012.1"
                     /translation="MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYA
                     VTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFI
                     RLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPK
                     RDVNTVSEPDSQIPPGFRG"
     gene            15521..16258
                     /gene="dnaC"
                     /locus_tag="JNZ89_002133"
     CDS             15521..16258
                     /gene="dnaC"
                     /locus_tag="JNZ89_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001731874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein DnaC"
                     /protein_id="HAY8936013.1"
                     /translation="MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAAL
                     ERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASF
                     IFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDL
                     SNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVM
                     DRMRLGNSLWVIFNWDSYRSRVTGKEY"
     gene            16307..16801
                     /locus_tag="JNZ89_002134"
     CDS             16307..16801
                     /locus_tag="JNZ89_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HAY8936014.1"
                     /translation="MMKTVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNS
                     TTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLE
                     KLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGL
                     NFIS"
     gene            17055..19346
                     /gene="opgB"
                     /locus_tag="JNZ89_002135"
     CDS             17055..19346
                     /gene="opgB"
                     /locus_tag="JNZ89_002135"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol--membrane-oligosaccharide
                     glycerophosphotransferase"
                     /protein_id="HAY8936015.1"
                     /translation="MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNIT
                     LFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRHRR
                     HHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDP
                     KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVAS
                     QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKS
                     HGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVD
                     THHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVS
                     SDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNY
                     LGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGS
                     HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELA
                     LSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRY
                     KADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITA
                     KAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGN
                     ILGHSPRKLGIGMVEIKVVEREG"
     gene            complement(19485..20507)
                     /locus_tag="JNZ89_002136"
     CDS             complement(19485..20507)
                     /locus_tag="JNZ89_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HAY8936016.1"
                     /translation="MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDI
                     HAWGGNQPFFSYPRVLGHEICGEIVRLGKNIADLKNGLQVAVIPYVACQQCPACKSGR
                     TNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAI
                     APGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDF
                     DAQLRAQFGGSLAEKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHK
                     KETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELI
                     KGVITF"
     gene            20646..21560
                     /locus_tag="JNZ89_002137"
     CDS             20646..21560
                     /locus_tag="JNZ89_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313344.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY8936017.1"
                     /translation="MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTT
                     VRHILSHLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTLINQR
                     QLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQL
                     FELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHS
                     LLLSAADNIFFDQSLEIISVIFHFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLD
                     ATLALRNHLNSAKQSMIRSINENTRYAH"
     gene            21775..>22245
                     /locus_tag="JNZ89_002138"
     CDS             21775..>22245
                     /locus_tag="JNZ89_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8936018.1"
                     /translation="MEKENITIDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAM
                     LLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLD
                     RKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVIND"
BASE COUNT         5502 a         5816 c         5495 g         5432 t
ORIGIN      
        1 aatggctgga gctggaaggc gcgaaagatc ttgatgacgc actctctctg ctgaccattc
       61 tttaccacca cgtaccgtcg gtcacatcga tgccggtcta cctagggcaa ctggatgcgt
      121 tgttgcaacc gtatgttaga attctaacac aagacgagat cgatgttcga ataaaacgtt
      181 tctggcgtta cctcgacgga accctgccag acgcctttat gcacgccaat atcggcccgt
      241 ctgattcgcc cattacccgc gcgatcttac gtgcagacgc agagttgaag caggtttcac
      301 cgaacctgac ctttatctac gatcctgaaa tcccccctga tgacctgctg ctggaagtgg
      361 cgaagaacat ctgtgaatgt agcaaaccgc acatcgccaa cggtccggtg catgataaaa
      421 ttttcacaaa agggggctac gggattgtga gctgttacaa ctcactgccg ctggcgggtg
      481 gtggcagcac gctggtacgc cttaacctga aagccattgc cgagcgcagc gaatcgctgg
      541 atgacttctt tacgcgcact ctaccgcact actgccagca gcagatcgcc atcatcgatg
      601 cgcggtgtga attcctctat caacaatcac acttctttga gaatagcttc ctggtgaaag
      661 aagggctgat taaccctgaa cgttttgtgc caatgtttgg catgtatggg ctggcggaag
      721 cggttaactt gctgtgtgag aaagaaggga ttgccgcgcg ctacggtaaa gaagccgccg
      781 caaatgaagt gggttatcgc atcagcgcgc aactggcgga gtttgtcgcc aatacccccg
      841 tgaaatatgg ctggcaaaaa cgcgccatgt tacacgcaca gtcggggatc agttccgata
      901 tcggcaccac gccgggcgcg cgtttgccgt atggcgatga gccagatccg atcatccatc
      961 tgcaaactgt cgccccgcat catgcttatt attattccgg catcagcgac attctgacgc
     1021 tcgacgaaac catcaaacgt aatccgcagg cgctggtaca gctttgcctc ggtgccttta
     1081 aagccggaat gcgtgaattt accgccaatg tcagcggtaa cgatctggtt cgcgttaccg
     1141 gttatatggt gcgtttgtcg gatttagaaa aatatcgcgc cgaaggttca cgcaccaaca
     1201 ccacctggct gggcgaagaa gccacacgca acactcgtat tctggaacgc cagccgcgcg
     1261 tgataagcca tgaacagcag atgcgcttta gtcagtaaga ttatcccctt ctcctgcgtt
     1321 gacgggccag gcagtcgtct ggctctgttt ctgcagggct gcaatctgcg ctgcaaaaac
     1381 tgtcacaatc cgtggacgat gggacgctgc aatgattgcg gagagtgcgt gccacagtgt
     1441 ccgcatcagg cgttgcagat tgttgacggc aaagtgctgt ggaacgctgt ggtctgcgag
     1501 cagtgtgata cctgcctgaa gatgtgtccg caacatgcca cgccaatggc gcaatccatg
     1561 agcgtggacg aagtgcttag ccatgtccgc aaagcggtgc tgtttattga agggataacg
     1621 gtaagcggcg gcgaagccac gacccaactg ccgtttgtag tggcgctgtt tactgctatc
     1681 aaaaacgatc cgcaactgcg ccacctcacc tgcctggtgg acagtaacgg catgttgagc
     1741 gaaaccggct gggaaaaatt actcccggtg tgtgacggcg caatgctcga tctcaaagcg
     1801 tgggggagcg aatgtcatca acacttaacc ggacgcgata atcagcagat taagcgcagc
     1861 atctgtttgc ttgcagagcg cggcaagctg gcggaactgc gtttgctggt aattccagac
     1921 caggtggatt atttgcatca catcgatgag ctggcgacgt ttatcaagag acttggcgat
     1981 gttccggttc gcctgaatgc gtttcatgcc cacggcgtgt atggcgaggc gcaaagctgg
     2041 gcgagcgcca cgccggaaga cgttgagccg ttggctgatg cgttaaaggt gcgcggggtg
     2101 agccggttga tatttccggc gctctatttg tgacatgccg gatacggcct acggttcggc
     2161 acagacttgt aggcatgata agacgcgaca agcgtcgcat caggcattgt gcgccaactg
     2221 ccggatgcgg cgtgaacgcc ttatccggcc tacggttcgg cacaaacctg taggcatgat
     2281 aagacgcgac aagcgtcgca tcaggcatta tgcgccgact gccggatact gcctacgaag
     2341 ggtaaactac ccactaacgc taaacaacgc atacgtatta ttaagcaaca cttcggcaat
     2401 ctcatcttct ggttccgggc gcaactcgca aagcacgtca aacacccgca cagcctgttc
     2461 cggtcggtta ggctgcccct gaaagccgtt gagcggcata tccggcgcgt cggtttccag
     2521 caacaacgat gccagcggta attttgcgat gacatcgcgg gttttactgg cgcgtggata
     2581 ggtgatagta ccgcctacgc cgattttgta gcccagctgt acaaaccgct cggcctgttg
     2641 caggctgccg gaaaaaccgt gaaccacgcc agtgcgcgat aaatcgtggc gtttaagatg
     2701 catcgccagt ttgtcgtgtg tgcgccgtga atgcaggatc accggcagat cgtagcgttt
     2761 cgccagtttc agctgttcgt cgagtaacca ctgctgcctc tcaagttgcg gatcgtcgcc
     2821 gaagagatcc agaccgacct cccccactgc caccaccttc gccggacgcc tttccagcgc
     2881 ctgctgtagc tgctcaagag acacatcgct atgtttttcc aacatacctg gatgcaagcc
     2941 caatgcggca tacagcggtt gatatttttc cgctaacgcc tgcacacggg caaaattttc
     3001 cgcctctgtc gccggaacaa tgatcttgcc tacgcccgct tgtgccgcgc gttgcaggct
     3061 ggcctcttca tcgccactaa acggcaggaa atcaaaatgg cagtgggtgt cgataaaacg
     3121 gcaaatcaag ccagatcctc attgttaaat gtcgggtcgt tcgcctgcgg agcgtcaatc
     3181 acttcggcaa ccagcgtatc gttggcgact ggcgcaggcg gaataacgat cgattccggc
     3241 gtcaccactg gcaccagatg gcgggtaagc ggcgcttttt cagttaatag cttgccaacc
     3301 gtggcgagga aataacaacc gcataaacgc ccaagtttat agtcttcacg cagcgccgga
     3361 atccgactgc caagcgcgat actatgtaat ggcttcggcg gataaatttc gaatatccgc
     3421 agcttgcccg gtggtttctc aataaattgc tgaatgtcac gatagctggt ttcatgatgc
     3481 tgcaccagat tgaccagcgg ctgcaggcta ctgtcaccca gccagcgttc catgcgtttg
     3541 aaccactgcg gcgtgtagta catttgtgac ggcacagtgc gaatgacgac caacgtttta
     3601 gcgccctgcc ttgccgcctc tttaaccgga atcgcatcac tgatcccgcc atccaggtag
     3661 ttaatgcctt ccagcgacac tccgctacga taaaagccag gtatcgcact ggaggcgcga
     3721 atcacatcca gccagttttg tttggttggt aaaaagtaat taggcgcgta gtcatcctga
     3781 cgacaggcgc acatataaaa cgatttgccg ctgtcaaaca accgcgcggc ggtatccatt
     3841 tgcaacggca tctggcttgc ggtggcctcc accagccagt cgagatcgat aagatttcct
     3901 ccacggacaa agcgcaatgg atcgaaaaat tcgcgttttg tggtatagcg catgatgact
     3961 ttacgcgcgt aaccgggctg attgcagata aacgccgaga ggttctgcgc cccggcagat
     4021 gtgccgagat aaagatcgaa aggattaaac tgcgcgcgca taaactcatc cagcacgcca
     4081 gccgtgaaaa ttccacgctg tccgccgcct tcgcacacca gagctattcg tccaggctgg
     4141 aacggcctta gcgacaacgg cgcaatatta ccaagcgtta caggtattcg ctgccccacc
     4201 tctgccttcc tgtttttgtt gtgaaagaat gacaaagtaa cgcaatttat tattcgctaa
     4261 aaccgcaaaa gccagtccgc tggactggct ttggataaaa ttttcttaat ggtctgaaat
     4321 ctagggtcgt tttcggccca tgaacaaact caccaggaac agaataatcc cgacgacaaa
     4381 gacaatttta gctgcgcctg cagcggtacc ggccaaacca ccaaacccaa gtgcggcggc
     4441 gattaacgcg ataaccagaa atatgatgcc ccaacgaaac ataagcgtct cctttaccat
     4501 agttaatgtc accgcttgat atgagcgtga aaatcactca atgcgatatt tttagtgtgg
     4561 tgcacatcgc gcctcccgac aaagttcggg aggacgaatt acgacgaatt acttagtttt
     4621 cagatcattt ttaacgcttt tcacaccatc taccgctttg gcgatacttt cagcacggtc
     4681 actttgtgcc tgagaatcta cggtaccgga gagctgaacc acgccgtcgg tggtttcaac
     4741 tttcacatga cgggaaggga cgatatcgtc cgccagcagt ttggctttga tttcactggt
     4801 ggtggcggtg tcacccgcgt agcccttcac cgagccttct ttagcgtcgc gaacgtgcag
     4861 tttgtcgctg acagaggtca ccccttcaac gcctttcgcc actttcactg cctcttcggc
     4921 ctgagcctag ctttcaacga aaccgctcag ggtcacgact ttttgctcgg ttttgacaga
     4981 gatatcggtg ctcttgatgt tgtcatgatc caccagcgcc gccttcactt tcgcggtgat
     5041 ggcgctgtca tccatgaaat taccgacttt attcatagag ctatcgactt tttgccctgc
     5101 gctttcattg gtagtctgtg cgttgttttc cgcgtaggca gagccggtcg cgacggcaga
     5161 ggtcaacatt acagccagca gagttttcga aatcttcagt cttgtcatag tcatcgattt
     5221 attcctgtat gtttgctcgt aatttgagcc tggcaacacg aggttgcatt gctgaatagg
     5281 gagagacttc accctctaca gaagtcaatg gccgccatca caaaagcgat gggtgatgaa
     5341 taacgaccat tacagcctct gaatcagtta ttaatatcgg tagaatgaca atcgacggct
     5401 ttagatactg atatctacgc attgaacggt atttaacgcc gtcagaaatg tcattacttt
     5461 gttaaatata gatcacaatt ttgaaaccgc tcgtgatatc agcgaaaaca taagcaaaag
     5521 tgaatgtttt aagaacattc cgtaagcggc taataaggaa gggaaattga cagggcgcag
     5581 cggctaccgc gccctggagg caagaattaa tgctcgcggg tctggtggaa ctgaacgtcg
     5641 ggataacgtt cctgcgccag gcgcaggttg accatgctgg tagcgatgta agcgaggtta
     5701 tcgccgccat caagcgccag ttggctttcg ttcttacgct tgaactcttc gaatttcttc
     5761 gcgtccgcac attctaccca gcgggcagtg gcaacgttga ctgattcata tactgcttca
     5821 acgttgtatt cgctcttcag gcgcgatacc accacatcaa actgcagcac accaacagca
     5881 ccaacgatca aatcgttgtt ggagatcgga cggaacacct gcaccgcgcc ctcttcggaa
     5941 agctgtacca gccctttgag cagctgtttt tgcttcagcg gatctttcag gcggatacga
     6001 cggaacagtt ctggtgcgaa gttcggaata ccggtgaact tcatcatctc accctgggta
     6061 aaggtgtcgc cgatctgaat agtgccgtgg ttgtgcaggc cgaggatatc gcccggatac
     6121 gcttcttcaa cgtgcgaacg gtcgcccgcc ataaaggtca gcgcgtcgga gataaccaca
     6181 tctttcgcag tacgcacctg gcgcagcttc atgccttttt catatttacc ggatactacg
     6241 cgcataaacg ccacgcggtc gcgatgtttc gggtccatat tggcctgaat tttaaatacg
     6301 aagccggtaa atttgtcttc gctcgcctct acggtacggg tatcagtctg acgcggcatc
     6361 ggcgcagggg cccactccac caggccatcc agcatatgat caacgccgaa gttacccagc
     6421 gcagtaccga agaataccgg agtgatttcg cccgcaagga acagttcttt gtcgaactcg
     6481 ttagacgcgc ctttcaccag ttccagttcg tcacgtagct gctgtgccag atcttcacca
     6541 accgcagcgt cgagatccgg gttattcagc cctttaacaa tacggacttc ctgaatcgtg
     6601 tggcctttac cgctctgata aagataggtt tcgtctttat aaaggtggta aacgccttta
     6661 aacagcttgc cgcagccaat cggccaggtg atcggtgcgc agccgatttt cagctcgttc
     6721 tcaacttcat cgagcagttc catcgggtcg cggatatcac ggtcaagttt gttcataaag
     6781 gtgaggatcg gcgtgtcgcg cagacgggta acttccatca gcttacgggt acgatcttca
     6841 acaccttttg cagcgtcgat aaccatcagg cagcagtcca ccgctgtcag ggtacgatag
     6901 gtatcttccg agaagtcttc gtgccccggg gtgtctagca ggttaaccag gcaatcgtga
     6961 tacggaaact gcatcacaga cgtagtaatg gagatcccac gctgcttttc catctccatc
     7021 cagtccgact tagcgtgctg gttggaacca cggcctttta ctgtaccagc ggtctgaatg
     7081 gcctgtccga acagcagcac cttctcggtg atggtagttt taccggcgtc cgggtgagaa
     7141 ataatggcaa aagtgcggcg cttcgccacc tcttgcaaat aaggagacaa cgtcataatt
     7201 ctttcttctt gagtaagcgg catcgcgccg cgcttgttga aaacgaaaaa ttgcggctat
     7261 tttacccatc aacggggggg aggcaatcag tgtttacaca ggagctgctc cagttcgtgc
     7321 aacgatgaaa cggtccaggt gggcgcgatg ccttctggtt gctcgagatg gtgcgcattc
     7381 agccagcaag tcgcaagccc ggcgttgatg ccaccgagaa tatcggactc ggcagtgtcg
     7441 ccaaccatca gcacgcgtga acggtcagga ttgcccgcca gttccagcgc ataatcgaaa
     7501 attttcttat tcggtttggc aatgccaact tcttcggaaa tcaccagcaa atcaaagtaa
     7561 tcacgcaggc ccgtccgttc cagacgcact tgctgcaagg cgctaaaacc gttggtgatg
     7621 atgccgattt tagcgttgcc acgaatggcg ttaagcagag aaaccgcgcc cggcagcggc
     7681 gtgcagattt ccgccatcgc attaataaag gcatcgttaa gcaagcctgc ttcaactttc
     7741 agccgttcgg cccagctctc gaaacgcccg tgctgaagct gtaatgaagt gatcgcgccg
     7801 ttttgataat ccacccacag tggcttgtta acggcctgat agtcctgaaa atcttcagcg
     7861 gtaaaggtga cgctgtaatc aagaaacatc cgctgcaggc cggtgaatga gtcaaaggta
     7921 aacagcgttt catcggcatc aaagaaaatc cagtcccact tcattattcc accttgtctt
     7981 acatactgat tggcaacgcc atgatgatgg cgtcttcgcg accgtccgtg gtggggtagt
     8041 aattgcggcg aatcgtcgcc tcgttaaagc ctaaactttc gtacagggca atggcggcag
     8101 cgtttgaagc acggacttcc agccatagtg tcgccacgcc gcgtttttcc agttcgtcga
     8161 tcagatgttt cagcagcacc cttcccaatc cctgacgctg atagtcagga tcgaccacaa
     8221 tattgaacaa tgtagcttca tccagcacca cttgcgtaat cgcaaacgcc gccattttgc
     8281 cgttttgcgt taactgaaag ttgagataac gctcgccctg gttgctggca aagttttttt
     8341 cactccacgg aaaggcgtgg gcgcgttgtt caatgtggta agccgctggt aaatcagtcg
     8401 tttcgaggga agaaatcgtg ttcatatgtg caaatctgtt gccataacgc ggcgcgtgcc
     8461 gttgggtttg cccgtaattc ggtgagcgcc ggtgatgcca cctgagcgcc ttccagtgat
     8521 agcggttcgt cagtacccaa ccgccagctg ttgcagcgac tgccttgcgg cagcatcgcg
     8581 attttttctg gcgtcagttg cagcacttga tcggggctga cggttaatgc gcgcagaaca
     8641 tcgctcacta aaggatcggt cagggcggga agatcgtttg ccaccatcac cagacggacg
     8701 tgtgccggga tcgcaatggc aatctccccc tgcaacgcgc cagggcgacg cagcgaccac
     8761 tgggtaatgc ccagttgctg taactgccag tctcgtcggg atgtcatagc gaatcgctcc
     8821 tgttgtcagg ggcgcaaata tagcaaattc gtcgataccg cgccaacata tggctataat
     8881 cgccgccagt atcaattgag gagcattcca tgtctgcatt taccccggca agtgaagtct
     8941 tgctgcgtca cagtgatgat ttcgaacaaa gccgtattct gtttgccgga gacttacagg
     9001 atgacctgcc cgcgcgttta gataccgcgg ccagccgtgc tcatacccag caattccacc
     9061 actggcaggt attaagccgc cagatggggg ataacgcccg tttcagtctg gtcgccacgg
     9121 tggatgacgt cgcagattgc gatacgctga tttactactg gccgaagaac aaaccggaag
     9181 cccagttcca gttgatgaat ttactttctc tgctgccagt ggggacagat atttttgtcg
     9241 ttggcgagaa ccgcagcggc gtgcgcagcg ccgagcagat gctggcagat tatgcgccgt
     9301 tgaataaagt cgacagcgct cgtcgctgtg gcctctattt tggtcgtctg gaaaaacagc
     9361 cggtatttga tgccgataaa ttctggggcg aatacagcgt cgatggcctg acggtcaaaa
     9421 cgctgcctgg cgtgtttagc cgcgacggtc tggatgtcgg tagccagttg ctgctctcga
     9481 cgttaactcc gcacacgaaa ggtaaagtgc tggatgtcgg ctgtggcgcg ggggtgcttt
     9541 cagttgcctt tgcgcgccat tcgccgaaaa ttcgtctcac cttgtgcgat gtctctgcgc
     9601 cagcggtaga agccagccgc gcaacacttg cggccaactg tgttgaaggt gaagtctttg
     9661 ccagcaacgt cttttccgag gtgaaaggtc gttttgatat gatcatctcc aacccgccgt
     9721 tccacgatgg gatgcaaacc agcctggatg cggcgcaaac gctgattcgc ggcgcggtgc
     9781 gtcatcttaa tagtggcggc gagctgcgaa ttgtagcgaa cgccttcctg ccttatccgg
     9841 acgtgctgga tgaaacattt ggcttccatg aagtgattgc gcaaaccggg cgtttcaagg
     9901 tatatcgcgc cattatgacc cgccaggcga aaaaaggtta agtatcccgc cgcaagcctt
     9961 gctggatgcg gcgtaaacgc cttatccgac ctacaaaacc tgcacgttag cccttcgtag
    10021 gccagataag acgcgccagc gtcgcatctg gcatctgccc ccgcatgcct accaaacctg
    10081 cacgctagtt tcctgatgga catttttcca gcaattacac ctccggcgat aattaactat
    10141 tgacgaaaag ctgaaaacca ctagaatgcg cctccgtggt agcaattctt tttaagaatt
    10201 gatggtatgc gaaggtggcg gaattggtag acgcgctagc ttcaggtgtt agtgttctta
    10261 cggacgtggg ggttcaagtc ccccccctcg caccaaacga ggcgatatca aaaaaaagta
    10321 agatgattgt gcgaaggtgg cggaattggt agacgcgcta gcttcaggtg ttagtgtcct
    10381 tacggacgtg ggggttcaag tcccccccct cgcaccaatt atctttactt cctttcttgt
    10441 ttcttccttg atttttcatc cctgattcaa attcattatc atcagcatga tggcagcaat
    10501 aagcgccagg cacgatggta gcaaaacgta atgccgtaac tgtttgtgat acagcatcac
    10561 cggcgtcaat actaatccca tcagaatgac aatccgccac tgatccggcg ataaatccgc
    10621 atacatcagc cctgcaatca gcaatcccgg cagcaacact ccccagccac tgcccagcgt
    10681 acgttgcaac atggtttcat ctctttcatt gataatgata actaatatca tatgataatt
    10741 tttatcattt gcaagccaga gaaatccctt gctatcgggt aaacctatcg ctaggattag
    10801 caatcattat catttagatt actatcccga ttatggccta tcgttccgca ccgctctatg
    10861 aagatatcat ctggcgaacg catctccagc cgcaggatgc tgggcttgca caagccgtac
    10921 gtgcgacgat cgccaaacat cgtgaacatt tgctcgagtt tatccgcctg gatgaacccg
    10981 ctccgcttaa cgccatgacg ctggcgcaat ggtcatcacc gaatgcgcta agttctctac
    11041 tcgcggtcta ttccgatcat atctatcgca accaaccaac gatgatccgc gagaacaaac
    11101 cgctgatctc actatgggca caatggtata tcggcctgat ggtgccacca ttaatgctgg
    11161 cgctactgac gcaggaaaag gcattagatg tgtcgccgga acatttccat gctgagtttc
    11221 acgaaaccgg acgcgtcgcc tgtttctggg tcgatgtgtg tgaagataaa aacgcaacac
    11281 cacattcgcc gcagcagcga atggaaacgt taatcagcca ggcgctggtt ccggttgtgc
    11341 aggcactaga agcgaccgga gagatcaacg gcaaacttat ctggagtaat accggttatt
    11401 tgatcaactg gtatctcact gagatgaagc aactgctcgg cgaggcgacg gttgaatcgc
    11461 tgcgccatgc cctctttttt gagaaaacgc tcacgaacgg tgaagataat ccactctggc
    11521 gtaccgtcgt gctgcgcgat ggcctgctgg tgcgccgaac ctgctgccag cgttatcgct
    11581 taccggatgt gcagcaatgt ggcgattgta cgctgaaatg aaagcactgc cggggaagta
    11641 aacccggcat catgcggatt aatagggatg caacacatta cttgcttcgc aatgccgcat
    11701 acataacaga atatctgcgg cctccaacac ccctgcatca gaactgacgc ccagtttcga
    11761 catcacatta aatttatgtg cacggatcgt tttgatattg cgtttaagct gctcggcaat
    11821 ttgtgtcatt gagtagccac gcgacataaa gcgcaatatt tctctctccg tcgggcttag
    11881 cgtccggctt tggttaatgt accactgatt gttcagtcgg tcggtcgcct gacgtacacc
    11941 atttaatgac aaaaagagtt cctgatgaaa aatctccagc gttgacgctt tacttaatac
    12001 accgtccagc ggtgatggcg acaatgaacc aatcagccga gcttcaatat catcatccgc
    12061 aataactaaa cgccgggtac gcggaaactt aatcgccagt tcagtcaggc aagataatcc
    12121 ctctctgcgc tcacttctca tggcagaaaa agaaaaatga ccgccgcaaa tgagatccgc
    12181 gacatggcat cctgaaatga ctcctgactg gtataggtat ggagcttata agggttaccc
    12241 gcaaactttc tgaataaact ctcaataccg atactgctca tgacgcattt ttctatgagt
    12301 gcgacatttc tcttcttaat tcggctgtgt tccattctgc ggcatctcca taaacagaag
    12361 gcaagttaag ttctcttgca ccctgcgcgc tatttatcca tgcatacatt tcagcgttgc
    12421 tgtgaattgc cagtcgacgc atcgcactgt ttttttgggc gctgatagtt ttattacttt
    12481 tcttaagcaa cgaaactatc tggttgatgc cccatccttt acctaatagc cgcagtacct
    12541 tgcgctctga aagagtgaga atgacggagc gatagctaaa atcatgagtt tcattcattg
    12601 ccggagaggt cagcatggcg ctgatacgct ctgcgtgcgt attgccggaa cgtacggtct
    12661 tgaccagatt ctcaatgggt tcaacatcag acaataacgt cgccgtaggg cacatgagca
    12721 attctactgc ctgggaatac caggagcgtg acaccatgaa aacccagtga atttcccgat
    12781 attgtgagat taaagaataa taatgttcac aaacagaacg tggatcttca ctttcaccgg
    12841 ctaaatcagc aatgactaat ccggaacgac gtaattgtaa taaggtaagg tcctccgcag
    12901 aggcgctgga tattatttca tattcaggga agtgagtcct catgacctct tttaaccctg
    12961 cttgcataac aggtatttta ctgataacaa ttccattttt gcagcatcct ggcaacatat
    13021 ttcctccaca tccactatct aaaaatcatg atggtttatt caggatattc attccttaaa
    13081 tgtttccagc aaattaatag attaagcgaa taaattatcc ttagcattca ctttcatatc
    13141 agcatactcc tgctgcacaa caactccact gcatgtgtca gaaggttagc atcaaatgat
    13201 aacctagtga aatagcctgg agacatttaa aatatctaca ttaagttgtt aggaatactt
    13261 aatgaaaaac agaaatcaca ttcatttaat ttataattaa atgatatccc ttcccgcaga
    13321 atgaaaagtc acacaaccaa tatttattca atgaaatctg atggttttaa cttgttaaca
    13381 ttaaaaaacg tgcccggtta tctattatcc tgattcgtaa aggccaaaca ataaattcat
    13441 tatagtgata atattcatgt gatagtttgt ttgcggcgag agataattcg ctttttatca
    13501 ccgagcttgt cccgataacc aggattaatc agcgcaattt tgatcttaac ctaccgcaaa
    13561 acaaccgtgc ttcatgatac aaatggattc tcattatctg aacaatacgc agcacgtcta
    13621 tgacaaaggg cgagttatgc aaactgagca acagcgagcc gtaacacggc tttgtatcca
    13681 gtgtggatta tttcttttgc aacatggtgc ggaaagcgcg ttggttgatg agctttcctc
    13741 acgactgggt cgggcgttgg ggatggacag cgtcgaaagt tctatctctt cgaacgccat
    13801 agtgctgaca accattaaag atgggcaatg cctgacatcg acacgtaaaa atcacgatcg
    13861 cggcattaat atgcatgtgg tgactgaagt ccagcacatt gtgattctgg cggagcacca
    13921 tctgctggat tacaaaggcg tagagaaacg atttagccaa attcagccat tacgttaccc
    13981 aagatggctg gtagccttaa tggttggcct ttcttgcgcc tgtttctgca aactcaataa
    14041 aggtggctgg gatggtgcca tcatcacctt ctttgccagt acggccgcga tgtatatccg
    14101 ccagctgctg gcacaacatc atcttcatcc gcagatcaac ttttgcctca ccgctttcgc
    14161 cgccaccacc atttccggat tgcttttgca acttcccact ttcagcaata cacccactat
    14221 cgcgatggcc gccagcgttc tgctgctggt gccgggattt ccgttgatta atgccgtcgc
    14281 cgatatgttt aaaggccaca tcaataccgg actggcacgc tgggcgatcg ccagtctgct
    14341 gacactggct acctgcgtcg gcgtggtgat ggcactgacg atttgggggc tacgcggatg
    14401 ggtgtgatcg agtttctgtt tgcattggcg caggatatga tcctcgccgc cattccagcg
    14461 gtcggctttg cgatggtgtt caacgttccc gttcgggcat tacgctggtg tgcgctgctt
    14521 ggcgcgattg gtcatggttc acgaatgatc ttaatgacca gagggctgaa tattgagtgg
    14581 tcaaccttta tggcctccat gctggtcggc accattggta ttcaatggtc gcgctggtat
    14641 ctggcgcatc cgaaagtgtt taccgtggcg gctgttatcc ctatgttccc gggcatatcg
    14701 gcttataccg caatgatttc ggcggtaaaa atcagccagt taggttacag cgaaccgttg
    14761 atgattaccc tgttaaccaa ctttcttaca gcttcatcga ttgttggtgc gttatccatc
    14821 ggtctttcca ttcctggatt atggttgtac cgcaagcgcc ctcgcgtata aaattgcctc
    14881 gcttaaagca cacggatgag agacagcctc ctctcctccg tgtgttacta taaaagttat
    14941 ctcccttctc gttcatcgtt ccatatttga gaaacagtat gtcttccaga gttttgaccc
    15001 cggacgtcgt tggtattgac gccctggtac acgatcacca aaccgttctg gcaaaagctg
    15061 aaggcggtgt ggttgccgta tttgctaaca atgccccggc gttttatgcc gtcacgcctg
    15121 cacgcctggc tgaactgctg gcgctggaag aaaagctggc gcgtccggga agcgatgtcg
    15181 ctctggacga tcaactctat caggaaccgc aagccgctcc cgttgctgta cccatgggga
    15241 aattcgccat gtatccggac tggcaacccg atgccgattt tatccgcctg gcggcgctat
    15301 ggggtgtggc actaagagag ccggtgacca ccgaagaact ggcctcattc attgcctact
    15361 ggcaggcgga aggtaaagtc tttcaccatg tgcagtggca acaaaaactg gcgcgcagcc
    15421 tgcaaatcgg tcgtgccagc aacggcggac tgccgaaacg agatgtgaat acggtcagcg
    15481 aacctgacag tcaaattcca ccaggattca gagggtaacg atgaaaaacg ttggcgacct
    15541 gatgcaacgc ctgcaaaaaa tgatgcctgc ccatatcaaa cctgcattca aaacgggtga
    15601 agaactactg gcctggcaga aagaacaagg agcgatccgc tccgccgctc tcgaacgtga
    15661 aaatcgggcg atgaaaatgc agcgcacctt taaccgctcc ggtattcggc cactgcatca
    15721 gaactgctcc tttgagaact atcgcgttga gtgtgaaggg cagatgaatg cgttaagcaa
    15781 agcgcgccag tacgtcgaag agtttgacgg caacatcgcc agcttcatct tttctggtaa
    15841 gccaggaacc ggcaaaaacc atctggcggc ggcaatctgc aacgagctgc tgctacgcgg
    15901 taaatccgta ttgatcatca ccgtggccga tattatgtcg gcgatgaaag ataccttcag
    15961 gaatagcggt accagtgaag aacaactgct taacgatctg agcaacgttg atctgctggt
    16021 gatcgatgag atcggcgtgc agaccgaatc gaaatacgaa aaagtgatca tcaaccagat
    16081 cgtcgatcgc cgctcttctt ccaaacgccc aaccgggatg ctgaccaaca gtaatatgga
    16141 agagatgacc aagttgctgg gcgaacgcgt gatggaccgt atgcgcctgg gtaacagttt
    16201 gtgggtgatc ttcaactggg atagctaccg tagccgggta acaggtaaag agtattaatc
    16261 cccgtttctg gcggtatact gcgacacaat tccaccttga gtaatgatga tgaaaactgt
    16321 taaacatctt ctgtgctgtg ccattgccgc cagcgcatta atttccaccg gggtgcatgc
    16381 tgcgtcctgg aaagatgcgc tctccagcgc cgccagcgaa cttggcaacc aaaacagcac
    16441 gacacaggaa ggcggttggt cgctcgcgtc attaactaac ttgcttagca gcgggaacca
    16501 ggccttaagc gcagataaca tgaacaacgc cgcaggcatt ctgcaatact gcgcgaagca
    16561 aaagctggcg tcggtaaccg atgccgaaaa catcaagaac caggtgctgg aaaagctggg
    16621 cctgaacagt gaagagcaaa aagaagacac caactatctg gatggcattc agggtttgct
    16681 gaaaaccaaa gatggtcagc aactcaatct ggataacatc ggaacgactc cgctggcaga
    16741 aaaggtgaaa accaaagcct gcgatctggt gttaaagcag gggctgaact tcatttcctg
    16801 aaccgcgaaa cgccgcgttt tagctgttac ccggctgacg cggctctctc ctgccctttt
    16861 ccctgcttct ggacggtttt ccccctgtta cacgggaagc gaccgcgatc aaaaaagtct
    16921 gtttataaac taattcctaa caacatcgca tttttttgac actagaattg cagcaatatg
    16981 gcgacgccat tacattgttc ttctcaaaaa gcttaaacgt tggctaaacg gcccggttta
    17041 gtgaggatcg cccgttgtca gaactactct ctttcgccct ttttctcgcc tctgtgctga
    17101 tttacgcatg gaaagcggga cgtaacacct ggtggtttgc agccacatta acggtgctgg
    17161 ggctatttgt cgttttaaat atcaccctgt ttgccagcga ctattttact ggcgatggta
    17221 ttaacgacgc ggttctctat accttaacca acagcctgac cggtgctggc gtcagcaaat
    17281 acatcctgcc gggtatcggc attgtgctgg ggctgacagc ggtgttcggt gcgctgggct
    17341 ggatcctgcg ccatcgtcgc catcatccgc accattttgg ttacagcctg ctggcgctct
    17401 tactggcgct gggttcggtg gacgccagcc cggcatttcg tcagataacg gaactggtga
    17461 aatcccagtc acgcgatggc gacccggact ttgcggctta ttataaagag ccgtcgaaaa
    17521 ctatccctga cccgaaactc aacctggttt atatctacgg cgaaagtctc gagcggacct
    17581 attttgataa cgaagctttc ccggatctca cgcctgaact gggcgcgttg aaaaatgaag
    17641 gcctggattt cagccacacg cagcagctgc caggaacgga ttacacgatt gcgggcatgg
    17701 tggcttctca gtgcggcata ccgctgtttg ccccctttga aggcaacgcc tccgcctctg
    17761 tctccagctt cttcccgcag aacatctgtc tgggcgatat cctgaaaaac tcgggttatc
    17821 agaactattt cgtgcagggc gcgaatctgc gttttgccgg taaagatgtg ttcctgaagt
    17881 cgcatggctt cgaccactta tacggctcag aagagctgaa aagcgtggtg gccgacccgc
    17941 actatcgcaa cgactgggga ttctacgacg ataccgttct cgatgaagcg tggaaaaagt
    18001 ttgaagagct ttcccgctca ggtcagcgat tctcactgtt taccctgaca gtcgataccc
    18061 atcacccgga tggttttatc tcgcgtacct gtaaccgcaa aaaatatgat tttgacggta
    18121 agccgaacca gtcattcagc gcggtaagtt gcagccagga gaatatcgcg gcgtttatca
    18181 acaaaatcaa agcgtcaccg tggtttaaag ataccgtcat cgtcgtctct tctgaccatt
    18241 tagcgatgaa caacacggcg tggaaatacc tcaataagca ggatcgcaat aacctgtttt
    18301 ttgtcattcg tggcgacaag ccgcagcaag agacgctggc agtgaagcgt aacacgatgg
    18361 ataacggcgc gacggtgctg gacattctcg gtggcgataa ctatctcgga cttggtcgta
    18421 gcagtttatc cgggcagtcg atgtcggaaa tcttcctcaa tatcaaagag aaaacattgg
    18481 cgtggaagcc ggatatcatc cgcctgtgga aattccctaa agagatgaaa gagttcacca
    18541 tcgaccagca gaaaaacatg attgccttct cgggtagcca tttccgtttg ccgctgctgt
    18601 tgcgggtttc agacaaacgc gtggaaccgc tgccggaaag cgaatactca gcaccgctgc
    18661 gtttccagct ggccgatttc gctccacgcg acaatttcgt ctgggttgac cgttgctata
    18721 agatggcaca actctgggct ccggaactgg cactctccac cgactggtgt gtctcgcaag
    18781 ggcagcttgg cggtcagcaa attgttcaac atgttgacaa aacaacatgg cagggcaaaa
    18841 cggcatttaa agatacggtc atcgacatgg cgcgttataa aggcaatgtc gatacgctga
    18901 aaattgttga taacgatatt cgctacaaag ccgacagttt catcttcaac gtcgccggtg
    18961 cgccagaaga ggtgaaacag tttagtggga tttcccgtcc agagtcgtgg ggccgctggt
    19021 ccaacgcgca gctgggcgat gaagtaaaaa tcgagtacaa gcatccgctg ccaaagaaat
    19081 ttgacctggt gattaccgcc aaagcatacg gcaataacgc cagccgtcct attccggtac
    19141 gcgtaggcaa tgaagaacaa acccttgtgc tgggcaatga agtgaccacc accacactgc
    19201 atttcgataa cccaaccgat gccgacacac tggtaattgt gccgccggaa cctgtctcaa
    19261 ccaacgaagg gaatatcctc ggacactcgc cacgtaagct cgggatcggc atggtggaaa
    19321 ttaaagtggt ggaacgtgaa ggataattcc tgactgatgt gtaggtcgca taaggtgcga
    19381 cctacacacc ttctgcggcc tacaaaacat cattgagaaa cagaaaaaaa cagcgcccaa
    19441 cacttccccg gacgctgcat ggcaacttta ataatctcgc cttatcagaa agtaattaca
    19501 cccttaatca actcacgatt gttaatcaca tcgcgctcgt aggtttctgc cagcgtggcg
    19561 aacggatagc gatgggttaa catcatgtca gcagtgattt ttccttccgc catcagtcga
    19621 ccgactttag caaaatcttc cggcgtggcg ttgcggctac ccatcatcgt cgtttctttt
    19681 ttatggaatt ccggatcgga gaactgcaac tcacctttaa acaggccgac aaataccacc
    19741 gtgccgccgt gacgaatcaa attcacggtg ttattcatcg catgttgatt acctgtcgcg
    19801 tcgatcactt tctccgccag cgaaccacca aactgcgccc gtagctgcgc gtcaaaatct
    19861 tcggctgacg ggtccagtaa aggtaattcc agacgcgttg ccacatgttc acggcgcgcc
    19921 ggactggtat ccgccaccac cacctgtgcg ccatcggctt tagcgattgc cgccgcgccc
    19981 agaccgattg gccccgcccc gaccaccagc acctgctcgc cgggagcaat ggctgcgcga
    20041 cgcaccgcat gagcgctaat agcgaaaggt tcaatcaatg ctgccgcctg cgggtcaata
    20101 ccgtctgcgg gcaaaatgtt cgccaccggc acgctcaaat actcactaaa accgccatcc
    20161 tgatgcacgc caatgactga aattttttca cagcaattgg tacgcccgct tttacacgcc
    20221 gggcattgct gacaggcaac ataagggatc acagcaactt gcagaccatt tttaagatca
    20281 gcaatatttt tacccagcct aacaatctcc ccacatattt catggcctaa aacacgtgga
    20341 taactaaaaa atggttgatt tccaccccag gcatgaatat cggtaccgca aatcccgaca
    20401 gacttaattt ttattaatgc ttcattgtca cccggaatag gtatctcgcg ttgtttccag
    20461 actaattctt tcggctgctg gcaaattaaa acattcatcg tagacatgat tcggctctcc
    20521 attttttgtt gccttagata tcaatgaaaa tgaaaaatgg cagcggaacg gaaaatctgt
    20581 tttgtgaaaa cacacgcata aaaatgtttt aaatcgggtt ttaatggact cacaaggagg
    20641 aaaatatgag tcgttcacaa aatttacgcc acaatgtgat taaccaggtc attgatgata
    20701 tggcgcgggg tcatatccct tccccacttc catcgcaaag tgcgctggcg gaaatgtaca
    20761 acatcagccg caccacagtg cgtcatattc tcagccattt acgcgaatgc ggcgtcttga
    20821 cgcaggttgg aaacgactat gttattgcgc gtaaacctga ccacgatgac ggtttcgcct
    20881 gtactaccgc ttcaatgagt gaacaaaaca aagtgtttga gcaggctttt ttcacgctga
    20941 taaaccagcg ccagttacgc ccaggggaaa ctttttctga actgcaactg gctcgggccg
    21001 cgggtgtcag cccggtggtt gtaagagaat atcttttaaa attcggccgt tataatctta
    21061 ttcaaagcga aaagcgcggc cagtggagca tgaagcaatt cgatcaatcc tacgccgagc
    21121 agctgtttga gctacgcgaa atgctcgaaa cacattcact tcagcacttt ctcaacctgc
    21181 ctgatcatga tccccgctgg ctgcaggcga aaaccatgct cgaacgtcat cggctactgc
    21241 gtgacaacat cggcaatagc tttcgcatgt tctcgcaact tgacagagat tttcactcct
    21301 tactgctttc agctgccgac aatatctttt ttgatcaatc gcttgagatc atctcagtca
    21361 tctttcattt tcactatcaa tgggacgaaa gcgatcttaa acagcgcaat atcattgccg
    21421 tcgatgagca tatgaccatt ctcagcgctc tgatttgccg cagtgacctc gatgccaccc
    21481 ttgcgctccg taaccatttg aattcagcta aacaatcaat gattcgatcc attaatgaga
    21541 acacgcgtta tgctcattaa gtacggatta aaaacagcaa actattagcg ggtgcacggt
    21601 tttatcaaaa gataaatacc gggaaattcc cgcttaccta tgctcacaat cagtcgacta
    21661 aaaatgtttt tgtgagcggt agtaaagtcc taaaacttta acctgccgtt aatgtcaacc
    21721 ttgcgtaatg cacaattacg taaacaatta aaattataaa tacaggagtc cggcgtggaa
    21781 aaagaaaata tcaccatcga tccgcgttct tcatttactc catcttcgtc ggcagatatt
    21841 cccgtgccac cagatggatt agttcaacgc agtacccgaa ttaaacgcat tcaaaccacc
    21901 gccatgttgt tattattttt tgcggcggta atcaattatc tcgaccgcag ttcgctgtcg
    21961 gtagcaaatt taacgattcg tgaagaattg ggattaagtg ccactgaaat cggcgctttg
    22021 ctctccgtgt tttcactcgc ttacgggatt gcgcaacttc cttgcggccc actattggat
    22081 cgtaaaggcc cacgcctgat gctgggactg gggatgttct tctggtcact gttccaggca
    22141 atgtctggca tggtgcacaa ctttacgcag ttcgtgttgg tgcgtatcgg tatggggatt
    22201 ggtgaagcgc cgatgaaccc atgcggtgta aaagtcatta acgac
//
LOCUS       DADMIB010000061        22186 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.061, whole genome shotgun sequence.
ACCESSION   DADMIB010000061 DADMIB010000000
VERSION     DADMIB010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22186
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.061"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            102..684
                     /locus_tag="JNZ89_002139"
                     /pseudo
     CDS             102..684
                     /locus_tag="JNZ89_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417001.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(779..2356)
                     /gene="guaA"
                     /locus_tag="JNZ89_002140"
     CDS             complement(779..2356)
                     /gene="guaA"
                     /locus_tag="JNZ89_002140"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HAY8936019.1"
                     /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
                     QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEA
                     SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
                     ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMHMLERFVRDICQCEALWTPAKIIDDAV
                     ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM
                     FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
                     GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
                     LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYNKVSQAFTV
                     FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
                     RVVYDISGKPPATIEWE"
     gene            complement(2425..3891)
                     /gene="guaB"
                     /locus_tag="JNZ89_002141"
     CDS             complement(2425..3891)
                     /gene="guaB"
                     /locus_tag="JNZ89_002141"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004159092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HAY8936020.1"
                     /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
                     TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLV
                     TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL
                     RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG
                     NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP
                     VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI
                     DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS"
     gene            4053..5423
                     /gene="xseA"
                     /locus_tag="JNZ89_002142"
     CDS             4053..5423
                     /gene="xseA"
                     /locus_tag="JNZ89_002142"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HAY8936021.1"
                     /translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS
                     GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
                     QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL
                     KRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND
                     ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS
                     TRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL
                     KRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRVQLSATRERFGNAVTH
                     LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKK
                     SRKKVH"
     gene            complement(5420..5635)
                     /locus_tag="JNZ89_002143"
     CDS             complement(5420..5635)
                     /locus_tag="JNZ89_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417005.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936022.1"
                     /translation="MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVL
                     KACGAVDYFCQHGHGLISKKRVEFVLA"
     gene            complement(5704..7176)
                     /gene="der"
                     /locus_tag="JNZ89_002144"
     CDS             complement(5704..7176)
                     /gene="der"
                     /locus_tag="JNZ89_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417006.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HAY8936023.1"
                     /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
                     AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
                     AKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
                     PWMEDLAPQEEVDEDAEYWAQFEVEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL
                     TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI
                     KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGCSLVIVVNKWDGLSQEVKEQV
                     KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV
                     EDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG
                     SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK"
     gene            complement(7294..8472)
                     /gene="bamB"
                     /locus_tag="JNZ89_002145"
     CDS             complement(7294..8472)
                     /gene="bamB"
                     /locus_tag="JNZ89_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HAY8936024.1"
                     /translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP
                     TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG
                     WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG
                     LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSA
                     VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ
                     IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYD
                     GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
                     "
     gene            complement(8483..9103)
                     /locus_tag="JNZ89_002146"
     CDS             complement(8483..9103)
                     /locus_tag="JNZ89_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HAY8936025.1"
                     /translation="MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNS
                     HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN
                     ELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV
                     ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI"
     gene            complement(9121..10395)
                     /gene="hisS"
                     /locus_tag="JNZ89_002147"
     CDS             complement(9121..10395)
                     /gene="hisS"
                     /locus_tag="JNZ89_002147"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HAY8936026.1"
                     /translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP
                     IVEQTPLFKRAIGEVTDVVEKEMYTFEDLNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
                     QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH
                     VTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQAL
                     LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
                     GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPIVDIYLV
                     ASGADTQSAAMALAERLRDELQGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV
                     TNGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG"
     gene            complement(10506..11624)
                     /gene="ispG"
                     /locus_tag="JNZ89_002148"
                     /gene_synonym="gcpE"
     CDS             complement(10506..11624)
                     /gene="ispG"
                     /locus_tag="JNZ89_002148"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HAY8936027.1"
                     /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
                     VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
                     AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
                     KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
                     RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK"
     gene            complement(11651..12664)
                     /gene="rodZ"
                     /locus_tag="JNZ89_002149"
     CDS             complement(11651..12664)
                     /gene="rodZ"
                     /locus_tag="JNZ89_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HAY8936028.1"
                     /translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV
                     RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLLGLEKQAPLRAAKVAPMQSFSL
                     GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
                     GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV
                     DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF
                     SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS
                     PAQ"
     gene            complement(12949..14103)
                     /gene="trmG/rlmN"
                     /locus_tag="JNZ89_002150"
     CDS             complement(12949..14103)
                     /gene="trmG/rlmN"
                     /locus_tag="JNZ89_002150"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HAY8936029.1"
                     /translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQ
                     VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ
                     RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG
                     AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA
                     LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT
                     IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL
                     MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV"
     gene            complement(14253..14684)
                     /gene="ndk"
                     /locus_tag="JNZ89_002151"
     CDS             complement(14253..14684)
                     /gene="ndk"
                     /locus_tag="JNZ89_002151"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HAY8936030.1"
                     /translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV
                     EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT
                     LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR"
     gene            complement(14833..17145)
                     /gene="pbpC"
                     /locus_tag="JNZ89_002152"
     CDS             complement(14833..17145)
                     /gene="pbpC"
                     /locus_tag="JNZ89_002152"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417014.1"
                     /note="penicillin-binding protein 1C; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase PbpC"
                     /protein_id="HAY8936031.1"
                     /translation="MLRLLTKRGCWITLAAVPFLLFLAAWGADKLWPLPLHEVNPARV
                     VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARA
                     AWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKILQLWRALQLEWHLSKREILILY
                     LNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAA
                     RNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTL
                     DAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMV
                     NAIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEA
                     LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA
                     AYTAFARHGKAGKLRLQPDDPLLEWPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPL
                     AWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQVNNILLS
                     RSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEG
                     INGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTSCP
                     PYGHYAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRN
                     VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ"
     gene            complement(17146..22107)
                     /gene="yfhM"
                     /locus_tag="JNZ89_002153"
     CDS             complement(17146..22107)
                     /gene="yfhM"
                     /locus_tag="JNZ89_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha2-macroglobulin"
                     /protein_id="HAY8936032.1"
                     /translation="MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSEN
                     ASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIH
                     VVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTIT
                     TRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRN
                     SLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAG
                     RYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQA
                     TSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFG
                     PRDLYRPGETVILNGLLRDADGKALPDQPIKLDVIKPDGQVLRSVVSQPENGLYHFTW
                     PLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPNDEVKFSV
                     VGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDK
                     GRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPANALPGLRPQFALK
                     SVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSE
                     DEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAG
                     YSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWW
                     QEIDVPAQGLDLTIPVDKTWNRHDLYLSTLVVRPSDKSRSATPKRAVGVLHLPLGDEN
                     RRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDP
                     WQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPLVNHVNIVAQQA
                     LPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRF
                     MASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVR
                     ALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAI
                     PADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAA
                     QLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLV
                     RAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ
                     KAPLGALREIWEHRADAASGLPLLQLGIALKTMGDATRGEEAIVLALKTPRNSDERIW
                     LGDYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAAR
                     TIQDLPGKWQAQTSFSAEPLTGEKTLNSNLNSDQLATLQVRNSGDQPLWLRMDASGYP
                     QSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLP
                     AGLELENQNLANGSASLEQSGDEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPV
                     TLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP"
BASE COUNT         5282 a         6221 c         5497 g         5186 t
ORIGIN      
        1 ttacgacagg tttagccgtt gttattacca caacgtataa cgaaacgcgt attcagccaa
       61 atactaaatg tcctgaaaag agctaataat caggaggagt catgaagaaa gtttttcttt
      121 gcgccatctt ggcctcctta agctatccgg ctatcgcctc atcattgcag gatcaactct
      181 ctgctgtagc agaagcggaa cagcaaggta aaaatgaaga gcaaaggcag catgacgaat
      241 gggtcgcgga gcgcaacagg gaaatccagc aagagaagca acgtcgcgca aatgcccagg
      301 tcgccgctaa caaaagagcg gcaacgtcgc gcaaatgccc aggtcgccgc taacaaaaga
      361 gcggcaacgg cagcagcaaa taagaaagct cgtcaggata aactggacgc cgaagcctct
      421 gcggacaaaa aacgcgatca aagttatgaa gatgagctac gcagcttaga gattcagaaa
      481 caaaaactgg cgctggcaaa agaagaagcc cgcgttaagc gagaaaacga atttatcgat
      541 caggaactga agcacaaagc tgcgcaaacc gatgtggtgc aatctgaagc tgacgccaac
      601 agaaatatga ctgaaggcgg tcgcgatctg atgaaaagcg tgggcaaagc agaagagaac
      661 aaatcggaca gctggtttaa ttaatcgatg ttagtaactt caagcctatg attcttgaag
      721 ataaaaaacc ctctgtagta acagagggtt ttgttcattc atagtgcagg gattaaaatc
      781 attcccactc aatggtagct ggcggcttgc cgctgatgtc atacaccacg cgggaaatac
      841 cgttcacttc attgataatg cggttggaaa cgcgaccgag gaaatcgtac ggcagatgcg
      901 cccagtgtgc ggtcataaag tcgatggttt cgacagcacg cagagagaca acccagtcat
      961 acttacgacc atcgcccatt acgccaacgg aacgtaccgg caggaacaca gtgaacgcct
     1021 ggctgacttt gttgtacagg tccgctttac gcagttcttc aatgaagatg gcgtcagcac
     1081 ggcgcagcag gtcacagtac tctttcttca cttcacccag cacacgaacg ccaaggcctg
     1141 gtcccgggaa cgggtgacgg tacagcatgt cgtacggcag gcccagctcc agaccaatct
     1201 tacgcacttc gtctttgaac agctctttca gcggttcaac caggcccatc ttcatctctt
     1261 tcggcaggcc gcccacgttg tggtgagatt tgatgacgtg tgctttaccg gttgcagaag
     1321 ccgcagattc gataacgtca gggtagatgg tgccctgcgc cagccacttc acgtcttcca
     1381 gtttcagcgc ttcttcatcg aacacttcaa cgaaaacgcg cccgatgatt ttacgttttg
     1441 cttccggatc gttttcgcca gccagcgctg acaggaagcg atcttctgcc ggtacgtgaa
     1501 caatgttcag accaaagtga tcgccaaaca tatccagaac ctgctctgct tcgttgagac
     1561 gcagcaggcc gttgtcgacg aatacgcaag tcagattttt accgatagcg cggtgcagca
     1621 gcattgcggt tacggaggaa tccacaccac cagagaggcc gaggatgact ttatcgtcgc
     1681 ctacctgctc gcggatgcga gctacagcat cgtcgataat tttcgctggc gtccacaggg
     1741 cttcacactg gcagatatca cgcacaaaac gctccagcat gtgcataccc tggcgggtgt
     1801 gagtcacttc cgggtggaac tgtacgccat agaagcgttt ttcttcgtta gccataatgg
     1861 caaacgggca gctttcggtg ctggctacgg tgacgaagtc ggacgggata gcggtaactt
     1921 tatcgccgtg gctcatccag acatcgagca gcggtttacc gtctgcggtc agcgcatctt
     1981 cgataccgcg aaccagtgcg ctgtcgttta cgacttcaac ctgcgcgtag ccaaattcac
     2041 gttcgttaga ggcttcaacg tgaccgccca actgcattgc catggtctgc atgccatagc
     2101 aaacgccgaa taccggtacg cctgcttcaa agacatactg cggcgcacgc ggactgtttt
     2161 cttcagtagt actttccggg ccgccggaaa gaataatgcc gcttggattg aagtcacgaa
     2221 tttgtgcttc tgtcacatcc cacgcccaca gttcgcagta aacacccagc tcacgcacgc
     2281 ggcgcgcaac cagttgagtg tactgagaac cgaagtccag aatgaggatg cgatgcttat
     2341 gaatgttttc cgtcattgac gcttattccg aggcaagtga aacagataat ataaatcgcc
     2401 cgacatgaag tcgggcgaag agaatcagga gcccagacgg tagttcgggg actctttagt
     2461 aatggtcacg tcgtgaacgt ggctttcctg aatgcccgca ccgctgatac gtacaaactc
     2521 cgctttagta cgcagttcgt cgatagtacc acagccggtc aggcccatac aggagcgcag
     2581 gccgcccatc tgctggtgaa tgatctcttt caggcgacct ttataggcta cgcgaccttc
     2641 gataccttcc ggcaccagtt tgtcggcagc gttgtcactc tggaagtaac ggtcagaaga
     2701 acctttggac atcgcaccca gagagcccat accacggtaa gatttgtaag aacggccctg
     2761 gtagagttca atttcacccg gagattcttc agtacccgcc agcatggaac ccaccattac
     2821 cgcgcttgcg ccagcggcga tagctttggc gatgtcgccg gagaagcgaa taccaccatc
     2881 tgcgataacc ggaatacctg tgccttccag cgcttcaact gcgtcagcaa cggcagtgat
     2941 ctgcggaaca cctacgccag taacgatacg agtcgtacag atagaaccag ggccgatacc
     3001 gactttaacc gcgctgcaac cagcttctgc caaagcgcgt gcacctgcag ctgttgccac
     3061 gttgccgccg atgatttgca gatccggata tttagcacgg gtttcacgga tacgctgcaa
     3121 aacgccttct gagtggccgt gggaggagtc gatcagcaga acgtcaacgc cagcggcaac
     3181 cagcgcgtca acacgctctt cgttacccgc acctgcgcca actgcagcac caacacgcag
     3241 acggccttgc tcgtctttac aggcgttcgg tttacgttcc gctttctgga agtctttcac
     3301 ggtgatcatg ccgatcaggt ggaattcgtc atcaaccacc agcgcttttt caacgcgttt
     3361 ttcgtgcatt tttgccagca ccacttcacg ggcttcacct tcacgcacgg tgaccagacg
     3421 ctctttcggc gtcatgtaaa cgctaaccgg ctggttcagg tcggtaacaa aacgcacgtc
     3481 acgaccggtg ataataccca ccagttcgtt ttcttcggta acaaccggat agcccgcaaa
     3541 accgttacgc tcggtcagtt ctttcacttc gcgcagcgtc gtggttggca gaacagtctg
     3601 cggatcagtc accacaccag attcgtgttt tttcacacgg cgaacttctt ctgcctggcg
     3661 ttcaatggac atgtttttgt ggataaagcc gataccgcct tcctgagcca gagcaatagc
     3721 caggcgcgct tccgttacgg tatccattgc tgcggaaagc atagggatat tcagacgaat
     3781 agttttcgtc agctgggtgc tgaggtcagc agtattcggc agaacggtag aatgagcagg
     3841 aacgaggaga acgtcgtcaa acgtcagagc ttctttagcg atacgtagca tgggcaatat
     3901 ctcgaccaga gtggttaata aatattgccg cggcattata cagagcgtaa ccgattgcat
     3961 ctaccccttt ttgcaaaaaa tgcttgctat ccccgaaggg cgggttacta tcgactgaat
     4021 aacctgctga tttagaattt gatctcgctc acatgttacc ttctcaatcc cctgcaattt
     4081 ttaccgttag tcgcctgaat caaacggttc gtctgctgct tgagcatgag atgggacagg
     4141 tttggatcag cggcgaaatc tctaatttca cacaaccggc ttccggtcac tggtacttta
     4201 cactcaaaga cgacaccgcc caggtacgct gcgcgatgtt ccgcaacagc aaccgccggg
     4261 tgaccttccg tccacagcat ggacaacaag ttttagttcg cgccaatatt acgctctacg
     4321 agccgcgcgg tgactaccag ataatcgttg agagtatgca gccggccggt gaagggctgc
     4381 tgcaacagaa gtacgaacag ctcaaagcga agttgcaggc tgaaggtttg ttcgatcagc
     4441 aatacaaaaa accacttccc tcccctgcgc attgcgttgg tgtgatcacc tcaaaaaccg
     4501 gtgctgcgct acatgatatt ttgcatgtgt taaaacgtcg cgatccttct ctaccggtga
     4561 tcatctaccc caccgccgtt cagggcgatg acgcaccggg gcaaattgtt cgcgccattg
     4621 aactggcgaa tcagcgcaat gagtgcgacg tgttgatcgt tgggcgcggc ggcggttcgc
     4681 tggaagattt atggagtttt aacgacgaac gcgtagcgcg ggcgattttt gccagccgca
     4741 ttccggtcgt cagcgccgtc gggcatgaga cggatgtgac cattgccgat tttgttgccg
     4801 atctgcgtgc gccaacgccg tctgccgccg ctgaagtagt gagccgtaat cagcaagagt
     4861 tactgcgcca ggtgcaatcg acccgtcaac ggctggagat ggcgatggat tattatctcg
     4921 ccaaccgcac gcgtcgcttt acgcagatcc atcaccgatt acagcaacag catccgcagc
     4981 tccggctggc acgccagcaa accatgcttg agcgcctgca aaagcggatg agctttgcgc
     5041 tggaaaatca acttaagcgt accgggcaac agcagcagcg gttaacacag cggctgaatc
     5101 agcaaaatcc acagccgaag attcatcgcg cgcaaacgcg cattcagcaa ctggaatatc
     5161 gtttagcaga aaccctgcgc gtacagctta gcgccacgcg tgaacgtttc ggtaatgcag
     5221 taacgcacct cgaagccgta agcccactgt caacgctggc gcgtggatac agcgttacta
     5281 ctgctactga cggcaatgta ctgaaaaaag tgaagcaagt taaagcgggt gaaatgctaa
     5341 ccacacgtct ggaagacggc tggatagaaa gtgaagttaa aaacatccag ccagtaaaaa
     5401 aatcgcgtaa aaaggtgcat taagccagca cgaattcaac gcgttttttc gatatcaagc
     5461 catgcccgtg ctgacagaag taatctactg caccgcaggc ttttaacacc tgcaacggtt
     5521 gatggcagtc tggacaaaga gctttcattt caataatttc cccgcaggat gggcaacgcg
     5581 catggccgtt atcctgatca agcacatgct gacattgtgg acaatgcagt tccatatgaa
     5641 ttcctccggt agccatccct ctacattcat agagggaatg gcagataaaa tacttacgga
     5701 taattattta tttttcttga tgtgcttcat cagacgctta cgtttacgca tctgggttgg
     5761 cgtcagggtg ttacgcttgt tcgcatacgg gttttcccct tctttgaact gaatacgaat
     5821 cggcgatccc attacgtcca gcgatttgcg gaagtagttc atcaagtagc gcttgtagga
     5881 atcaggcagg tctttcacct gattaccgtg aatcaccaca atcggcgggt tataaccacc
     5941 agcgtgggca tatttcagct tcacacgacg accgcgtacc agcggcggtt ggtgatcttc
     6001 aacagccatc gtcatgatgc gcgtcagcat agaggtcccc acacgacggg tggagctgtc
     6061 atacgcttca cgtactgatt caaacaagtt accaacacca ctgccgtgca aggcagagat
     6121 aaagtgcaca cgagcaaaat cgataaagcc cagacggaag tccagcgttt ctttcacctg
     6181 ctctttcact tcctggctca ggccatccca cttattcacc acaatgacaa gtgagcaccc
     6241 actattgaga ataaagccca gcagcgagag atcctgatcg gaaatacctt cgcgcgcatc
     6301 aatcactaac atcaccacgt tggcatcttc aatggcctgc aacgttttga ttacggagaa
     6361 tttctctaca gcatcggtga ttttgccgcg tttacgtacg ccagcggtgt caatgagcac
     6421 atactcacgt ccatcgcgtt ccattggaat gtagatactg tcacgcgtcg tgccaggcat
     6481 gtcataaaca acaacgcgct cttcaccaag aatacggtta gtgagtgtag acttacctac
     6541 gttcggacga cccacaatcg ccagtttgat cggcagactt tgcgggtcga agtcgtcttc
     6601 ctcttcttct tcgccgttct cttccacttc aaattgcgcc cagtattcag cgtcttcgtc
     6661 gacttcctct tgcggtgcga gatcttccat ccacggcagc agcacatgct ccagcagact
     6721 taatacgcca cgaccgtgag acgcggcgat cgggtagatt tcacctaagc caagcgagta
     6781 gaaatcaacc actgcctgat cgggatccag accgtcagtt ttgtttgcca ccaggaaggt
     6841 cggtttttca cgggagcgca gatgtttggc aatcgcttca tctgccggca tcaggcccgc
     6901 gcgcgcatcc accataaaca gtacgacgtc cgcttcttca atcgccagca gcgactgttc
     6961 cgccatgcgg gtttctacac cgtcttctgt gccatcaatc ccgccggtat caatacagat
     7021 aaactcacgg ccttcaattt ccgcacgacc gtacttacgg tcacgagtca gacccgggaa
     7081 atccgcaacc agcgcatctc gggtgcgagt tagacggtta aataacgtgg attttcctac
     7141 gttagggcgc ccgacaagcg cgaccacagg taccatgttt aaagcctcat ttttataaat
     7201 catcagacaa cgcacgctat attcgcgtcg ttgttaaaaa caggaaaacg gcccctgtcc
     7261 aggagccgtt ttcaaagtga acgacagaga cgattaacgt gtaatagagt acacggttcc
     7321 gtcttttgcc tggatcagca gtttgccgtc agcggcaacc ggttcagtct ggaaaccgga
     7381 actatcaact ttttgctggg caacgaaacg accatcttcg acattaatcc agtgcagata
     7441 accttcactg tcaccgacca ccaggttgcc atcatacagc accggagaag tcagcaggcg
     7501 atgcaacaga tcgctttgtg tccacagcgt aacgccgcca tcaatggtca acgccatcac
     7561 ccggtcattt tgatcgacca gatagatgcg attgccgtcg acgatgaaat cattcaccga
     7621 acccagttcg cgtttccaca taatctgacc actgcgcaga tcaagcgccg tcaggttacc
     7681 attataggcc agcgcgaaaa caacgccgtt aacaacgacg ggagtcgtgt caacatcgct
     7741 cagacggtca atttcggtag aaccggtcgc ctgggaaata cgctgctgcc aaatcatctg
     7801 gccctgttcc atcagcactg cgctgacgcg accattatcg ccccccacga cggccgcacc
     7861 aaaagccgtt gccggcgcag actcgccacg caaagagagc gaaggcatat cgaggttaac
     7921 tgtccatttg acagcgccgt cagcttcgtt cagcgcttgt aactgaccgt tactggtgtg
     7981 gattaacacc agaccgtcgc tgaccaccgg gcgcgaaagt gcttcacccg cgactttagt
     8041 ttgccatgcc acagtaccat cgctggtatt cagcgcgtaa acctgcgcct tttcgctgcc
     8101 aatgtagaca tgcccaccag acacggtcac accgccagaa agtaatgcag gctctttaga
     8161 gaaccagcca tctttctcgg ccaggctgac agaccagatt tctttgccat catccgcatt
     8221 cagcgctttt accaaaccag cgcggtccgc tgcatagaca acgttgtccg ccagtgccgg
     8281 atgaagattg gaatagaagt tgccaatgcc gctaccaacg gaagtactcc acgccgtggt
     8341 cggcgtaaac tggttttcaa cggttggcaa tggggacatc tttaccacat cttcttcgct
     8401 gttaaacagc gaacagccgc ttaaaagggt aacggaaagc agtcctggca gcagtaattt
     8461 acgcaattgc atcgggtccc tctcagatgg acaaattatt aattttcatc tgcatcattt
     8521 cgctcagtgc cggagtaaca tcgcttttca cgcctgcttc ccatgcacta cgcgcacctt
     8581 gcttatcacc tttgctcagc aatgcttcac cacgcaggtc ggcaacaatg gcagcccacc
     8641 cttcaccttt gatggtatca agggttttca gcgcggcatc agcctgcttg agctgtacct
     8701 gaacgcgagc aagacgcaga tttatcacgg ctttgagatt ttcatcgctc gtgtctgcca
     8761 gcccctgttg taactgggcg gcagctttct ctagttcatt tttgtcaaca aattgctgcg
     8821 caagttccaa agaagccagc gcaccataag tatttttatt ttcagcagca aatttttccg
     8881 ccgccgggat gctatccggt ttgccttcgc tcactgcggt aaccgcattt tgataggcaa
     8941 gagaagcgga gcgtgcagaa tcaacctgat ggctgttcca gtagcgccag ccaatcagtg
     9001 cgccaacgcc caaaatcacc ccaacagcca gtgctttgcc attttcagca aaaaagcgtt
     9061 taaccgcttc tacctggtcg ttttcgttct cgtaaatttc cacgctgtcc ttctccttcc
     9121 ttaacccagt aacgtgcgca aatgcgcggc tacgctatcc tgcgcaactg ccgtttgctc
     9181 accagagcgc aaatccttca ctactgctgt gccgttagtc acttcagact cacccagcac
     9241 cacagcaacg cgggcacccc atttatcagc acgggcaaac tgtttcttaa agttgccgcc
     9301 gccgtggttg gtcatcaatt tcacgccctg taattcatca cgcagacgct cagctaatgc
     9361 catagccgca gattgtgtat cagcacctga agccaccagg tatatatcga caataggatc
     9421 ggctttaaat tccggattaa cggcctgtac taacaataca agacgttcga ggcccatcgc
     9481 aaaaccgaca gccggtgttg cacgaccgcc cagttgttcc acaagaccgt cataacgacc
     9541 gcctgcacac acggtgccct gggagccgag actgttagtc acccactcga aaacggtacg
     9601 gttatagtaa tccagaccac gcaccagacg ctggtttacg gtgtaagcga tccccgcgct
     9661 ctcaagcagt ttgcacagac cggcaaaatg ctcacgagat tcctcgtcca gataatcacc
     9721 taatgccgga gcgtcgttga gaagcgcctg cacttccgga ttttttgaat ccagcacgcg
     9781 cagcgggtta gtgtacatgc ggcgtttgca gtcttcgtcc agcttttctt tatgctgctc
     9841 aaggaatgcc accagcgcat cgcggtaatt ggcgcgtgct tccagcgaac cgatagaatt
     9901 cagctcaaga gttacgtgtt cggaaatacc cagcgcgcgc caccagcggg cggtgagcat
     9961 aatcagttca gcgtcgatat ccggaccttg cagaccgaaa acttcgcagc ccaactgatg
    10021 gaactgacga taacgccctt tctgcggacg ctcgtgacgg aacatcggcc cgatatacca
    10081 cagacgctgt tcctgattgt acagaagacc atgctcgatg ccggcgcgta cacagcccgc
    10141 cgtcccttca gggcgcagag tcaggctgtc gccattgaga tcctcaaagg tgtacatctc
    10201 tttttcaacc acgtcggtga cttcaccaat cgcacgtttg aatagcgggg tctgctctac
    10261 aatcggcaag cggatttcac tgtaaccgta gctgccgagc acgtttttca gtgtgccttc
    10321 aatgcgctgc cagatggccg tttcgccagg caggtaatcg ttcatgccgc gaatggcttg
    10381 aatgtttttt gccacgttta ttctctttct gaatataaaa atgaaccctc aacgcttccc
    10441 tcaatgtttg gggagccatg cgggttcaat catacacggg aagcgaggcg cttcccatca
    10501 cgttattatt tttcaacctg ctgaacgtca attcgacgcg cttcatccag ctgactggct
    10561 ttcgcacgaa tgcgtgcttc cagctggtcg atcatatcgt tgttgtccag acggtctttg
    10621 cgcacgccat cttcatagag gccgcttttc ttgttgccgc cggtgacgcc gagtgtagaa
    10681 accagcgcct cacctgggcc attcaccacg cagccgataa tagaaacgtc catcggagtg
    10741 atgatatctt ccaggcgttg ctccagcgcg ttaaccgtac cgataacatc aaattcctga
    10801 cgcgaacagg tcgggcaggc gatgaagttg atccctcgcg aacggatacg cagcgatttc
    10861 aaaatatcga aaccgacttt gatctcttcg accggatcgg ccgccagcga tacgcgcagc
    10921 gtgtcgccga tgccttcaga cagcagcaga cctaaaccaa tggcggattt tactgccccg
    10981 ctgcgtgcac caccggcttc ggtgatcccc agatgcagcg gctgatcgat ctgttttgcc
    11041 agcaaacgat aagactcaac agcgaggaag acgtcagacg ctttcacgct gactttgaac
    11101 tgatcgaagt tcaggcgatc gagatgatca acatgacgca tggcggattc cagcaacgcc
    11161 tgcggcgtcg gttcgccata cttttcttgc agatcttttt ccagcgatcc ggcgttaacg
    11221 ccaatacgga tcggaatgtt tttatcgcgc gcacagtcaa ccaccatgcg aatacgctct
    11281 tcattaccga tattgccagg gttaatacgc agacaatcga cgccgtattc cgctactttc
    11341 agcgcaatgc gatagtcgaa gtggatgtca gccaccagcg gcacgttaac ccgctgtttg
    11401 atgagtttga acgcttctgc cgcgtccatc gtcggtacgg agacacggac gatatcagcg
    11461 ccaacgcgtt ccagcgcctt gatttgattg accgttgctt cgacatctgt cgtacgcgta
    11521 ttggtcatgg actgtacggc gatgggagca ccatcgccaa tcggcacatt cccaacgtaa
    11581 atacgtgttg attttctacg ttgaattgga gcctggttat gcatgaaaaa tctcccgcgt
    11641 tacccgtctg ttactgcgcc ggtgattgtt cggcattgag ggtcagacgc gcaacctggt
    11701 tagttctgat aaaacgactc agatcgacag gtttcccttg atactggatc tgtactgcgg
    11761 ctggcgcacc aattttcagt ttgtacggtg cctggccggt taagttcaaa ttaccgtctt
    11821 tacgctgcat accgctaaac aattttttac cggtagcatc agtgacctcc agccagcaat
    11881 cggcagtaaa gttcatcacc agcgcattcg gatcagccac cggcgtggtc acgccagcct
    11941 gatcggttgg caacggcgca gcaccatctg gcgttgttgc tgccgttggt gccggggtcg
    12001 cggcggtatc aacatttgcc tgcgaaggcg aaacaaccgc attctgttgc ggatcaacag
    12061 ctggtgctgg cgcagttacg gcaggtgttt gcgtgttggt tgcggtagta tccacagacg
    12121 ctggcggcgt ggacgttgta gccgggtctg tagttgtcga cgtatttaac ggaacactct
    12181 gcccctgctc gctattactg ctcagttccg ccgaagattg atcggccata gtggtgatct
    12241 cttcctgctg agctttgtgg tcttgccacc accaggcacc gctcaggccg ataaccacaa
    12301 acaacaccag ccaggtgaag gtcatcagcc agccgtcacg ttttttgcgg cgtttaccga
    12361 gggaaaaact ctgcatcggc gcaactttcg cagcccgtag tggagcctgc ttttccagcc
    12421 ctagcagcag ttcttcttct ggaatatgta ccagacgcgc ataagagcgg atatatccgc
    12481 gcaggaatgt tgaagcaaga tcggcgggtg ccttatcttc ttcaatgtcg cgtaccgtgg
    12541 aaaccttcag gcaaagtcgc tcggcaacgg cctgctgact aagtcctagt tgttcgcgag
    12601 cattacgcag gcgagcgccg gtagtaagtg cttcattttg gtcgtgcgtg gcttcagtat
    12661 tcattcgctg caggtacgtt taaatgagaa ttgagatgcc ggtgaaccat catgctcacc
    12721 cacaccgcga aacatccgtt aagttaaccg ttatcataca gtataagacc gtctgtgtgc
    12781 tcgtgacaaa gcccacattc actaaggcta acttactgtt gcatcgttac atactgcctt
    12841 aaagtcagca aaaacgcacc gttaatattg accagacaat tgcaacttaa tacttcattc
    12901 ataaaagatt acgccacggt acataaagta accgtggcgt aatggctatc agaccgcttt
    12961 aatgtcgatg gcttcaccct gcatccgttt acgcagggta cgtttcgtac ggtcgataac
    13021 atcgcccgcc aactgaccac aggcagcatc gatatcatca ccacgagttt tacgcacaat
    13081 agtggtgaaa ccgtagctca tcagcacttt tgagaaacgg tcgatacggc tgttcgaact
    13141 gcgtccatac ggcgcgcccg ggaacgggtt ccacgggatc aggttgatct tacacggcgt
    13201 atctttcagc agctccgcca gttggtgcgc gtgttcagtg ccgtcgttaa cgtggtcaag
    13261 catcacgtat tcaatagtga ctcggccctg attggcgttg gatttctcca gataacggcg
    13321 caccgcagca aggaacgttt cgatattgta ctttttgttg atcggcacaa tttcgtcacg
    13381 aatttcgtcg ttcggcgcgt gcagggaaat tgccagtgca acgtcgatca tatcgcccag
    13441 tttatccagc gccggaacta caccggaagt agaaagcgtg acgcgacgtt tagacaggcc
    13501 aaaaccgaaa tcatccagca tgatttccat cgccggaacg acgttgttca ggttgagcag
    13561 cggctcgccc atgcccatca tcactacgtt agtgattggg cgctgaccgg tgacttttgc
    13621 tgcgccgacg attttcgccg cacgccacac ctggccgata atttccgaca cccgcaggtt
    13681 gcgattaaag ccctgctggg cggtggaaca gaatttacac tccagcgcac accccacctg
    13741 cgaagagacg cagagcgtgg cacggtcgtc ttccgggata tacaccgttt cgacgcgctg
    13801 atcgccaacg gcgatcgccc atttaatggt gccgtcggat gaacgctgtt cttcaaccac
    13861 ttccggtgcg cggatttccg ccacctcttt cagtttgccg cgcaacactt tgttgatgtc
    13921 ggtcatctca tcaaagttgt cgcagcaata gtgatacatc cacttcatca cctgatcggc
    13981 gcggaagggt ttttcaccta aatctttaaa aaactcccgc atctgctgac ggttgagatc
    14041 cagcaggttg atttttccat ctttcgtggt gacgttttca ggtgtgacta attgttcaga
    14101 catatgctat tccggcctcg ttattacacg ttatggcccc tggagggttg aaaaaagaaa
    14161 cgccccggtg agcggctgct cgtccggggg cgctgcattg tacaaattct ggcgcacgga
    14221 tgccacgttt gcacgcggca tttacgaaat tattaacggg tgcgcgggca cacttcgcct
    14281 tcgccaaaga aataagcgat ttcgcgagcg gcagattcga cggaatcaga accgtgggta
    14341 ccgttttcgg tcaggctgtc agcgtaatca gcgcgcagag taccagccag tgcgtttgcc
    14401 ggattggtcg cgcccagcag atcgcggtga cgctgaacgg cgttttcacc ttccagcacg
    14461 gaaaccacga tcgggccaga ggtcatgaat tcaaccagac catcaaagaa cggttttcca
    14521 tcgtgttcag cataaaagcc acgtgcctgt tcaacggtca ggtgcagcat tttggtgccg
    14581 acaattttga accctgcagc ttcaaagcgc gcaaagatat taccaatgac gttttttgct
    14641 accgcgttcg gtttgatgat ggaaaaagta cgttcaatag ccatttttac ctctgtaaat
    14701 tgttctgttg ttgtctgtac cagcgtacga gatggcgcgg attataatga gcaacagggc
    14761 cgttgactat tgatgaaggt aacatttttt taaaataaaa tgaggtttag caacaatcag
    14821 ggacaaaaca gactattgca tgacaaattt cactgtcgcg atttgcccca cgtcatccat
    14881 caccagcaat tgataatcac ctttatccgt caaatgcagg gtcacgttgc gcccgcgttc
    14941 agttaacggt tcgccattca gaaaccacca gcgttcacct gcccctccac ttgattgcaa
    15001 cggcaaagtc gcttccgctg cgcccggtaa acgtttaata atcgcgccat cgcgaacgcc
    15061 tgtcagctgc agcgggagct gggcatagtg accgtatggc gggcaacttg tcgaggccgg
    15121 tggtaagcgc acagcgcgac gttctgatgc gggcagccag ggttccagcg gtagcggcca
    15181 gacatttatc atttcttgtc gcgcttgcgg gcaatcagcg gcaacacgtt tgccattttc
    15241 atccagccag atggggaaac gaatgccatt aatgccttcc tgctccggca gtaatagagt
    15301 tggcggctga ctcccgtcca gcagccaggt tgccaggcgg cggcgacagt taccgtcacc
    15361 ttccggcaaa gactgtccgc ccggccagca gataacgcca cgagtgactg agttcgggcg
    15421 cgggtcttcc ggcagattcg cactgcgcga cagtaagata ttattgacct gattcaacaa
    15481 tggtacggca ctggcaaagc caaactgacc aacaacgggc gtgccgtccg gtctgccagt
    15541 ccagatccca atgacatagc gagcgttaac cccaatcgcc caggcgtcac gatagccata
    15601 gctggtgccc gttttccatg ccagtggggc gacgcgcggc aaggcactat ccggcaaggg
    15661 ttgcgcttca tcagccataa tccggcgaat gatccacgcc gcccccgacg acattaaagg
    15721 ccattcaagc agcggatcgt caggctgtaa gcgcaatttg cctgccttgc cgtggcgagc
    15781 aaacgcggta tacgctgccg ccatatcttc cagttttgca ccagcgccgc cgagaatgag
    15841 tgaaagattc ggcgcagcac cgttgggcaa atataacggc aatccaacat tgcgtaactt
    15901 tgccgcaaac cgtttcggtc cataggcttc cagcacctgc acagcaggta agttcagcga
    15961 gcgcaccagc gcctcgctca tgctgatcgg gccatgaaaa ccgctatcaa agttacctgg
    16021 tcgataatca ccggtgcgcc gggggacgtc ttgcagcagt gatgccgggt ggatcaagcc
    16081 ttcatccagc gccagaccat aaacaaacgg tttgagcacc gatcctggcg atcggatcgc
    16141 attgaccata tcaacatgac caaagcgtga atcatcgttg agatcaaccg atcccaccca
    16201 gccgcgaaca cgcatatcgg tatgatcaac cacgatcatc gccagtgagc tgcgcggtgg
    16261 caaccgccct ttccagtttt gcgccagttc ttccagacgt cgttgaagac cggcatccag
    16321 cgtagtaacg attttgtcgc ttttgctttt accgagcatc atgcgcgaaa acagcggtgc
    16381 cagttgcggc atttgtcggg gtgccagcca gatgggttct tcccttgact cttttacctg
    16441 ctcacgggac cacacacctt gcacggccat ccgttcgagc actttattac gcgcggcttc
    16501 ggcacgctcc ggccaacgat ccgggcgcag tcggctgggc gcttgcggta acaccgccag
    16561 cattgccgcc tcggaatagc ttaaattcgc aggcgatttt ccgagataag cccaacttgc
    16621 cgcaccgatc ccctgcaacg taccgccaaa cggagcgcgg ttaagataca agatcagaat
    16681 ttcacgctta gacaaatgcc actccagttg caacgcgcgc cagagctgga gaattttgcc
    16741 accaaatgtt ttggggtgag gatcaagcag acgagcaacc tgcatagtga gcgtgctgcc
    16801 accagaaata acccgtcccg aagtgagatc ttgccatgct gcgcgcgcca ccgagaatgg
    16861 attcaccccc ggatgcttcc agaaccagcg atcttcataa ttgatcagcg cttcaaggta
    16921 acgtggagac acatcttcga ttgttaccgg ataacgccag atgccatcag catcggcgaa
    16981 gcgccagagc ggcgtaccat cctgcgccac gaccactcgt gcgggattga cttcatgcag
    17041 cggtagaggc cagagtttat ctgctcccca cgctgcaaga aaaaggagaa atggcacagc
    17101 tgccagcgtt atccagcagc cgcgtttggt taacaagcga agcatttacg gtcggacaat
    17161 cagcagatct tcagccgcgc cggtcgcccg ccattgggga acatacattg attccaccat
    17221 cggttgcggt acctgatacg ttcccggcgt caccgcccgc gccagataca ccagcgttac
    17281 cggttggtat tcatcaacgg caaccgccgc cacaaagcga tcgtcacgga actcaatgtg
    17341 cttaatgctc gcctgctgca tctggttcag taagttttgc acttcgtcac cactttgctc
    17401 caggctggcg ctaccgttcg ccagattctg attttccagt tccagacccg caggcagcag
    17461 atccacgact aacgcatccg gcacgctgtt actggctttt acctgcaacc agaccagcac
    17521 cagatcgccg ctacgtaacg agtccagcga tttgctctta ccatcagtac caagaatatg
    17581 acgctcgatt tgcagcacat tgttcgccgg taaaggtgcg gattgcggat aaccgctggc
    17641 atccatacgc aaccataacg gctgatcgcc actgtttctc acctgcaagg tggcaagttg
    17701 atcgctattc agattgctgt ttagcgtttt ctcacctgtc agcggctcag ctgagaaaga
    17761 ggtttgcgcc tgccatttac ccggtaaatc ctgaatcgta cgggcagcca ggaacaacgc
    17821 gttactttcc tgcgtcgata gccagcgttc accaaacgcc tgctgcgaaa gtgtgttcag
    17881 caaagtgtac tgctcatcgg gtagcagttt attttcttcc agcaaggaga gcattaacgc
    17941 gttgtcgcgc agtggactac cgtaatcacc cagccatatc cgctcatcac tatttctcgg
    18001 cgttttcagc gccagcacaa tcgcttcttc accacgcgtt gcatcaccca tggttttcag
    18061 cgcaatgcca agttgcagca gcggtaaacc agaagcggca tctgcacgat gctcccagat
    18121 ttcacgcagc gcacccagtg gtgctttttg ctgacgggcc agcaccagcg cagcgtaaga
    18181 ctgaacggcg aatttactgg ctttgagatt atccgcgtac gggatcgaca tcatgcccgg
    18241 atcttgtaaa tagcgcagca gacgctcatt accccggtta atggcgtctg tcggcacgct
    18301 gtaaccctgt tcgcctgcgc ggaccaggaa atccatcacg taagccgtca gccagtactc
    18361 ttcgtcaccg tttttatccc acagcgcaaa gccgccgtta tcacgttgca tttgcagcaa
    18421 acgggaaatg ccgatatcga ccgatgcacg gcgtttctca tcactgtcgc ctttgatgcc
    18481 caacgcctgc agttgggctg cgttggtata aagtgacggg aacaggccgc tggcggtttg
    18541 ctcaagacag ccgtacggat acgcttttaa ctctttgata taacgtgcaa tgttcagcgg
    18601 tggtttgccg ctcaacaaca attgcccttc cagcgtaaca ggcgagaagt tttgcaatcc
    18661 atccgccgga atcgcccatg tctcaccagg ctgtaacgcc gtaccgtaat taaccgtttg
    18721 tgccgggaac gccggacgga cgccgatttt ccactgctta tgctgatcgg caacggtttc
    18781 acccggtaac gctaacccgc taatggtggc ctgaatttct ccatcgccat aacccggcaa
    18841 tgctcgcacc gggataaaca gcgtagtacg cacacctggc gctaattcaa cggctgcggg
    18901 tgaatcgctg accagttcaa gcaaaccact ggcggtcagg gcaacgttca gtttttgcgg
    18961 tttatcggta agattagtga tatccagcgt cagacgcgag gtatcgccac tcgccataaa
    19021 gcgcggcatg ttcagttcag caatcaccgg tgcggcaact atcactttgc tttcgttgct
    19081 accgaaatca tctgccgtcc aggcttgcgc catgacgcgc aattcaccgt taaaatcgcc
    19141 aatcggcagt gtaaccgagc cttcgccctg ttcgttgagc gttaccggca gcgcctgctg
    19201 cgcgacaata ttgacgtgat tgaccagcgg tttaccacca cgtttcagct catcaccatc
    19261 gccaccgaaa cgcagagctg ccagacgccc ctgaccttca ataacctgac cgtaaatatc
    19321 gtaaatgtct gcgccatagc gtttctgacc aaagaacgcc tgccacggat ctggcgtgac
    19381 gtagtcagta atattcagca caccactatc aacggcagac accagcacat tcacctgttt
    19441 aggcttctcg ccatttttag tgctggcttt aattttcacg gttaatggtt gattgggacg
    19501 catttttgct ggtgtttcca gcgccagatc gaggcgacgg ttttcatcgc caagcggcag
    19561 atgcaacaca ccaaccgcgc gttttggcgt cgcggagcga gatttatcgc taggacgtac
    19621 caccagcgta cttaaataca gatcatgacg attccaggtt ttatcgaccg gaatcgtcag
    19681 atccagccct tgagccggaa catcaatctc ttgccaccac agcggccctt cactggactc
    19741 gaccatcgca taacctttac ccgccgttgg cgcggcgata tgcaacttaa tggtgtcgcc
    19801 agggcgataa ctggctttat ccagtttcag cgtgacacgg tcgggtcgca ctgcgccgct
    19861 accgtcgctg ttgtcctgcc aactatagcc agcccagaaa cgaacactac tgaccgcttc
    19921 attcggcgct ttgacttcca gacgataagc gccccactct accggaaaac tgaccttgcc
    19981 ggtttcgtcc gctttcagat ccagagtttg ttcattttcg atcagatctt tttgatcaaa
    20041 ctgtgactgc cagccttcat cttctgacca gttccagtag taatcgcggc gttcgcgaat
    20101 caggcgcacc tgcaagcccg acacggcttt tttcacgcct tgtgcatcgc tataaacgat
    20161 gtcaaaagcg gcgttactgc cttcatcaac aatgggctgt ttcaccgtgc tgtcagtgcg
    20221 ataatcgtaa accgatttca aggcgaactg cggacggagc cccggcaatg cattggcagg
    20281 ccagatagcc tgctcagcgc ggcgcgtcac cgggcgaccg cccgattcca gcaaactgcc
    20341 ctggaaaata acctgcaatg gggaatgcgt ttccttccac tggctttctg tagaaacttc
    20401 gccgcgccct ttatcatcca gcgtcaactg aacttcatcc agcgtgcggg aaaggttttc
    20461 ggcagctata tcgccgaatt caaaaccagg taaggctgac acagcctcac gcagtgggcg
    20521 caggaaaagt tgcccttgca aagtattacc attagcaggc gcaccgtaca ggtagtatcc
    20581 caccacggag aatttcactt catcattcgg cgtaagcggg gttttctcac cggtcagatt
    20641 cagcgccata cgctctggca taaaatcttc gacgtggaaa tcccacatcc ggtactggtt
    20701 atcgcccgtg ttggcgcgaa tatgccacat accggttgcc gcattgctat cgagtggcca
    20761 ggtaaagtgg tagaggccat tctccggctg actaacgacg ctcctgagta cctgcccgtc
    20821 aggtttaatc acgtctaact tgatgggttg atcgggcaat gctttaccgt ctgcatcgcg
    20881 cagtaaacca ttgaggatta ccgtttcacc tgggcgataa agatcgcgtg ggccaaacat
    20941 gaaaaactgt ttgctatagc ctggcgcgcc agcaatgtta aattctgcta agtccagcgc
    21001 cggaagtttt aaatcgagta gcgttgtctg accgtcttta cgtgccagca gtaatgccgc
    21061 atttttatca ttttccagct gcacatgccc ctgagcgtca ctggttgcct gagtcagagt
    21121 ctgccctttc tcatttaata aagagacttc aattccttgc tgggccgcgc cgttttccag
    21181 actttgggta aagatatcca gacgattgtg ataacggtga gctgaaacgc cgatatcact
    21241 taacgtaaac agcgtcgcgg gattactgta atcgtaacgt ccagcctgat tcatcacagc
    21301 cagatacacg cccgcctgct gaagcggttt gatatcgccc agcggcagca ataatttttc
    21361 acgggtgtta cgcgcaggat tgagatcaaa ccgtccggtg tagaccagat ccgccatctg
    21421 cagcagtttg tctgactgcc agttcgccag cgaattgcgg tattcccatt ggctaatgaa
    21481 tgctggcaga gattctggct taacgcggaa gaagttaaca tcgacattat taacgttgag
    21541 cgccattacc ggcagccctt caacgacttt gccaggcagc agcgaaccac ggctggcaaa
    21601 accgacgctg ggttggatgt cgcgggtagt tatagttttt tcgtaatctt tactgaaggt
    21661 tgcgttgttg agtgctttga cctccttgcc aatagtaacg atcaaatcac gtttcggttc
    21721 gaggtggcgt aaacgtagct ctttaagatt atctgacagc tcccaggcac catccacttt
    21781 gccgcttttt ttatcgacga catgaataac gcgtgagaaa tcctgatccg ggtcgagagg
    21841 gatggagaac gtcagcacca gcgtggctgc accatcaagt tggacttcag agagatccag
    21901 caatgtcagc accttaccgg cactctgttg ggccagtttt tgtctctccg gcacggagag
    21961 ttttgctgaa ctcgcgtttt ctgaagaggc cgctttagta acttcagaag gcgcatcttt
    22021 tttcaccgct gttggcgcgt tatcgttgtt gtcgcaccct gccagcgcca gcattagcat
    22081 gcaggcggct acgcgtaact ttttcatttt tcatccctgc cacaatggcc cgttagcaac
    22141 gtcgaataat tattatgcgt gagaatttac gttatgtaat tcagta
//
LOCUS       DADMIB010000062        20753 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.062, whole genome shotgun sequence.
ACCESSION   DADMIB010000062 DADMIB010000000
VERSION     DADMIB010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20753
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.062"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(11..556)
                     /gene="hemG"
                     /locus_tag="JNZ89_002154"
     CDS             complement(11..556)
                     /gene="hemG"
                     /locus_tag="JNZ89_002154"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HAY8936033.1"
                     /translation="MKTLILFSTRDGQTREIASYLASELKELGIQTDVANVHRIEEPQ
                     WENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTN
                     SYARKFLMSSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTD
                     WEQVANFAREIAQLTNKPTLK"
     gene            complement(568..2019)
                     /gene="trkH"
                     /locus_tag="JNZ89_002155"
     CDS             complement(568..2019)
                     /gene="trkH"
                     /locus_tag="JNZ89_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkH"
                     /protein_id="HAY8936034.1"
                     /translation="MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFF
                     VALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
                     FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQL
                     YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATI
                     AIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
                     FIGVQFTLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLP
                     VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
                     ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSM
                     NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
     gene            complement(2058..2672)
                     /locus_tag="JNZ89_002156"
     CDS             complement(2058..2672)
                     /locus_tag="JNZ89_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMPACT family protein"
                     /protein_id="HAY8936035.1"
                     /translation="MESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRA
                     EHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGIGEITAVVVRY
                     YGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDG
                     KIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE"
     gene            complement(2672..4003)
                     /gene="pepQ"
                     /locus_tag="JNZ89_002157"
     CDS             complement(2672..4003)
                     /gene="pepQ"
                     /locus_tag="JNZ89_002157"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HAY8936036.1"
                     /translation="MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLD
                     DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
                     DVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRS
                     FKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIV
                     ALNEHASVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKD
                     VNDEQLALIATMKAGVSYVDYHLQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
                     HGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIES
                     LLAPWREGQFSKHFNWQKIEALKPFSGIRIEDNVVIHENNVENMTRDLKLA"
     gene            4193..6382
                     /gene="fadB"
                     /locus_tag="JNZ89_002158"
                     /pseudo
     CDS             4193..6382
                     /gene="fadB"
                     /locus_tag="JNZ89_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001490315.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadB"
     gene            6392..7555
                     /gene="fadA"
                     /locus_tag="JNZ89_002159"
     CDS             6392..7555
                     /gene="fadA"
                     /locus_tag="JNZ89_002159"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadA"
                     /protein_id="HAY8936037.1"
                     /translation="MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPA
                     LEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAA
                     RMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGI
                     SREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
                     LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCN
                     PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINL
                     NGGAIALGHPLGCSGARISTTLLNLMERKDVQFGLATMCIGLGQGIATVFERV"
     gene            complement(7747..8448)
                     /gene="fre"
                     /locus_tag="JNZ89_002160"
     CDS             complement(7747..8448)
                     /gene="fre"
                     /locus_tag="JNZ89_002160"
                     /EC_number="1.5.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-flavin reductase"
                     /protein_id="HAY8936038.1"
                     /translation="MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER
                     DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDYQIVVDIPYGEAWLRDDE
                     ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLSELEALSLKHP
                     GLRVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSER
                     NAREDRLFGDAFAFI"
     gene            complement(8494..9987)
                     /gene="ubiD"
                     /locus_tag="JNZ89_002161"
     CDS             complement(8494..9987)
                     /gene="ubiD"
                     /locus_tag="JNZ89_002161"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HAY8936039.1"
                     /translation="MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
                     AGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPK
                     GFRDLFDKLPQFKQVLNMPTKRLRGVPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLIT
                     WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVS
                     VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGY
                     IEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
                     ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQF
                     MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSK
                     MGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA"
     gene            10154..10642
                     /gene="rfaH"
                     /locus_tag="JNZ89_002162"
     CDS             10154..10642
                     /gene="rfaH"
                     /locus_tag="JNZ89_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription/translation regulatory transformer
                     protein RfaH"
                     /protein_id="HAY8936040.1"
                     /translation="MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRT
                     AVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPK
                     DIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFR
                     KL"
     gene            complement(10639..11421)
                     /gene="tatD"
                     /locus_tag="JNZ89_002163"
     CDS             complement(10639..11421)
                     /gene="tatD"
                     /locus_tag="JNZ89_002163"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' ssDNA/RNA exonuclease TatD"
                     /protein_id="HAY8936041.1"
                     /translation="MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQ
                     AQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELASQPEVVAIGECGLDFNRNFST
                     PEEQERAFVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREE
                     MQACVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDFTPKPSS
                     RRNEPAHLHHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF"
     gene            complement(11463..12239)
                     /gene="tatC"
                     /locus_tag="JNZ89_002164"
     CDS             complement(11463..12239)
                     /gene="tatC"
                     /locus_tag="JNZ89_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HAY8936042.1"
                     /translation="MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHL
                     VSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
                     ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMA
                     LFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLL
                     AIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE"
     gene            complement(12242..12757)
                     /gene="tatB"
                     /locus_tag="JNZ89_002165"
     CDS             complement(12242..12757)
                     /gene="tatB"
                     /locus_tag="JNZ89_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HAY8936043.1"
                     /translation="MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLAT
                     TVQNELIQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPE
                     KASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKT
                     AAPSPSSSDKP"
     gene            complement(12761..13030)
                     /gene="tatA"
                     /locus_tag="JNZ89_002166"
     CDS             complement(12761..13030)
                     /gene="tatA"
                     /locus_tag="JNZ89_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HAY8936044.1"
                     /translation="MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
                     DDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV"
     gene            complement(13109..14749)
                     /gene="ubiB"
                     /locus_tag="JNZ89_002167"
     CDS             complement(13109..14749)
                     /gene="ubiB"
                     /locus_tag="JNZ89_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HAY8936045.1"
                     /translation="MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWM
                     PNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDG
                     KLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDIL
                     PVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
                     NFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFF
                     TQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFN
                     RDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
                     RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAF
                     KEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGAT
                     LVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR"
     gene            complement(14746..15351)
                     /gene="ubiJ"
                     /locus_tag="JNZ89_002168"
     CDS             complement(14746..15351)
                     /gene="ubiJ"
                     /locus_tag="JNZ89_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiJ"
                     /protein_id="HAY8936046.1"
                     /translation="MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGF
                     STSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDI
                     QVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEA
                     ITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK"
     gene            complement(15365..16120)
                     /gene="ubiE"
                     /locus_tag="JNZ89_002169"
     CDS             complement(15365..16120)
                     /gene="ubiE"
                     /locus_tag="JNZ89_002169"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HAY8936047.1"
                     /translation="MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
                     FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLK
                     MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVL
                     KPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQ
                     DTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF"
     gene            complement(16215..17642)
                     /gene="rmuC"
                     /locus_tag="JNZ89_002170"
     CDS             complement(16215..17642)
                     /gene="rmuC"
                     /locus_tag="JNZ89_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HAY8936048.1"
                     /translation="MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAE
                     LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR
                     QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF
                     GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG
                     LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR
                     ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE
                     ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI
                     GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY
                     RLRSVPEQPNDEAYQRDDEYNQQSR"
     gene            complement(17783..18544)
                     /gene="udp"
                     /locus_tag="JNZ89_002171"
     CDS             complement(17783..18544)
                     /gene="udp"
                     /locus_tag="JNZ89_002171"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HAY8936049.1"
                     /translation="MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKL
                     ASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
                     NVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSD
                     TFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
                     VIVNRTQQEIPNAETMKQTESQAVKIVVEAARRLL"
     gene            18806..19618
                     /locus_tag="JNZ89_002172"
     CDS             18806..19618
                     /locus_tag="JNZ89_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY8936050.1"
                     /translation="MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPA
                     YHARPKQSDGPLPVVIVVQEIFGMHEHIRDICRRLALEGYLAIAPELYFREGDPNDFA
                     DIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHN
                     PQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
                     LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS"
     gene            20012..20280
                     /gene="hcp"
                     /locus_tag="JNZ89_002173"
                     /pseudo
     CDS             20012..20280
                     /gene="hcp"
                     /locus_tag="JNZ89_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278763.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
     gene            20434..20753
                     /locus_tag="JNZ89_002174"
                     /pseudo
     CDS             20434..20753
                     /locus_tag="JNZ89_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356833.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
BASE COUNT         5080 a         5602 c         5210 g         4861 t
ORIGIN      
        1 ttctttatgc ttatttcagc gtcggtttgt tggttaactg ggcgatttct cgggcgaaat
       61 tcgccacctg ctcccaatcg gtatagacaa cttctttgcg cgtatccgtt tcaccgcctg
      121 acatcttcat aatcagctta atcataaaac ggtcgtacca gcgataacgt gggtaacgca
      181 gcgccccggc aatgaccgcg cagcgatcgg gacgccattg tgaactcatc agaaacttgc
      241 gcgcgtagct gttggtctgt ggagtacgct tctccggttt gcgcgccacc aggtttacgg
      301 aataaaaggc gctcggcatc gaattcagtc gcgtcgcatg ttttttgaca aattcctgga
      361 acgcagagtg gtagtgacca tagcgaatag aagcaccaat gaccacacgg tcatagtttt
      421 cccattgtgg ttcttcaatg cggtgcacat tggcgacatc cgtctggatc cccagttctt
      481 tcagttccga agccaggtag gaggcaatct cgcgcgtttg tccgtccctt gttgagaaaa
      541 gaattaatgt tttcacgtat tactccatca ttcacgccag aaagtcgggg taaagagcac
      601 cagcaatgta aagacctcga gacgaccaaa cagcatgttg gcaatcagga tccatttagc
      661 caccgggttc atactggtaa agttatcagc aaccacgcca agccctggcc ccaggttatt
      721 caatgtcgca acaactgagg caaaggcaga aaaatcatcc acgcccgtgg cgataatcgc
      781 cagcatactg acaataaaca ccaatgcata ggcggagaaa aatccccaaa cggcttcgag
      841 gatacgttcc ggcagtgcgc gattccccag cttaatgcta tagacggcgt tcggatgcac
      901 cagtcgtttc agctcacggt tcccctgctt aaacagcagc aggatgcgga tcactttcag
      961 gccaccgccc gttgacccgg cgcaaccgcc gataaaagct gaacataaaa gcagtaccgg
     1021 caaaaagagc ggccagcggg caatgctgtc agtcgtaaac ccggcggttg tcgccatcga
     1081 taccacctgg aaaaacgcct ggttaattgt catcagcgcc gaactgtaga cattatgaaa
     1141 ccacagtacg agtgtacaaa taaccaccag cgtaaactgt acgccgataa acatgcgaaa
     1201 ttccggatcg cgccaataaa ccttcagact acgcccactt aacagtgaaa agtgcagacc
     1261 gtagttacaa ccggagatca gcaggaagat agcaatgata gtgttaatag tcggactgtc
     1321 gaaataaccg atactggcat catgtgtcga gaagccgcca atagcgatag tcgcaaagct
     1381 atggccgatg gcatcaaagg catccattcc ggcaaaccac aacgccagcg cacaggcgac
     1441 ggtcagcaag acataaatca accacagggt tttcgccgtt tccgcaattc gcgggcgcat
     1501 tttgttatct ttcagcgggc cgggcatttc tgcgcgatag agctgcatcc cacccacgcc
     1561 gaggataggc agtatcgcaa ccgctaacac gatgatcccc atcccgccaa accattgcag
     1621 catctggcga taaaagagga tggcatgagg gagcgaatcc agccccacca gcgtagtggc
     1681 cccggtggtg gtcaggccag agaaagattc aaaaaacgca tcggtaatcg tgaggttcgg
     1741 gctttccgag aagataaaag ggagcgcacc gacactaccc agcacggtcc aaaacagcac
     1801 cactatcaga aacccctcac gggatttcag ttcgcccttc tctttgcggt tcggccacca
     1861 cagcatagag ccaatggcga gggcgacaaa aaaggtctgg gtaaaagcgc ggcccgctcc
     1921 atcccggtag atgagtgcta ccagcccagg gataatcatg gtccctgaaa ataagatgac
     1981 cagtagtcca acgattcggg taatggcgcg aaaatgcatc tctgccgctt ccttagttct
     2041 gcaaaatgaa gtggggatta ttcttcaatc gctaacaatt gcaatgaacc acggctaaaa
     2101 tccgccagct ttgcggaaaa ttcagccact ttcgccgccg gaagcgccac ccgcagcaga
     2161 acgaatgcct gataatcact gttgataatt ttgccgtcac actgccccag caacgcttca
     2221 atgccggtta actgactata ttcacattgc aaagtatatt cggttaatgg cgtcttgcgt
     2281 tgggtcgtta gctggcgcag cgcctgattc acgccgccgc catacgcttt cactaaccca
     2341 ccggtgccaa gcaatatgcc gccgtagtag cgcactacca cagcggtaat ttccccgatg
     2401 ccgctgccca ttagctgggc gagcatcggt ttacctgccg ttcccgccgg ctccccgtcg
     2461 tcagagaaac ccagctgttg agaatcatcc ggcgcacccg ccacccacgc cacgcaatgg
     2521 tggcgggcat cggggtgttc tgcccgcacc gattcaacaa acgctttcgc cgcctcaacg
     2581 ccatcggtat gcgccaacat cgttatgaag cggctctttt tgatctcttc aacgaccgtg
     2641 accggtgccg caggaattaa ccagctttcc atcacgccag tttcagatcc cgggtcatgt
     2701 tttccacgtt attttcgtgg atcaccacgt tgtcttcgat acgaatgccg ctgaacggtt
     2761 tcagtgcttc aattttctgc cagttgaagt gcttgctgaa ctgcccttca cgccacggtg
     2821 ccagtagcga ttcgatgaag tagatacccg gttcgatggt taacaccatg cccggctgga
     2881 gaatacgggt gcagcgcagg tacggatatt ttgccggtgc cgcgaggtgt gtaccgctat
     2941 catcctgcat aaaaccggct acgtcatgca cctgcaggcc cagcggatgg ccgataccgt
     3001 gcggcataaa cggtccggtg agatcgtttt cgaccatcgc ttcttcactc atatcggtga
     3061 tgatttgatg tttacgcagc aatttggcga tgcgctgatg gaactggagg tggtaatcca
     3121 catagctgac gccagctttc atggtagcga tcagcgcaag ttgttcatca tttacgtctt
     3181 tcaccagctg tgcgtagtcg ttgtcgcttt ttgccgacca ggtacgagtc aggtcagccg
     3241 catagccgtt atattcggcc ccggcatcca gcaggaagct gcgcatctct tccggtgcct
     3301 gatgatccag tttggtgtaa tgcagcaccg aagcgtgttc gttaagcgcc acaatgttgc
     3361 tgtaaggtac gtcggtatca cgatgaccgg tcgcggtcag ataggcgatg ttgatatcga
     3421 actcgctcat gccagaacgg aacgcttctt ctgccgcacg atgaccgttg accgccattt
     3481 tctgcgcttc acgcatacag gccagttcgt actcggtttt gaaggagcgg tagtaatgca
     3541 ggtagtcgat cacccctttc gggttgatgt tgctggcctc aatacccagt tgcagcgcac
     3601 gttccggcac cggaccgata taaccgatat tgccgcgcgc agcgggcagc aggctaccaa
     3661 tgccatcggc tttcggcagt gcgatcactt ccacatcttc agtccagaag gaggtcggca
     3721 gcggttcgac gttgtgccag taatcaaccg gcagatagaa ccacagtttc ggcttgttca
     3781 cgccatccac cagcaaccag cagtttggca cctgagttac cggcacccac gctttgaatt
     3841 gcgggttcac tttaaacgga tagggatgat cgtcgagaaa aacgttgaac agctcgccgg
     3901 agtgaataag taatgcatcc agcttgaagc gcgccagcgc atcgcgagtc cgttcttgta
     3961 aggtagctat atgattttta tagagcgagg ccagtgattc cattttttac ccttctgttt
     4021 ttttgacctt aagtctccgc atcttagcac atcgttcatc cagagcgtga tttctgccga
     4081 gcgtgatcag atcggcattt ctttaatctt ttatttacat gtttttaaca caaaatacac
     4141 acttcgatgc atctggtacg accagatcac cttgcggatt caggagactg acatgcttta
     4201 caaaggcgac accctgtacc ttgactggct ggaagatggc attgccgaac tggtatttga
     4261 tgccccaggt tcagttaata aactcgacac tgcgaccgtc gccagcctcg gcgaggccat
     4321 cggcgtgctg gaacagcaat cagatctaaa agggctgctg ctgcgttcga acaaagcagc
     4381 ctttatcgtc ggtgctgata tcaccgaatt tttgtccctg ttcctcgttc ctgaagaaca
     4441 gttaagtcag tggctgcact ttgccaatag cgtgtttaat cgcctggaag atctgccggt
     4501 gccgaccatt gctgccgtca acggctatgc gctgggtggt ggctgcgaat gcgtgctggc
     4561 gaccgattat cgtctggcga cgccggatct gcgcatcggt ctgccggaaa ccaaactggg
     4621 catcatgccg ggctttggcg gttctgtacg tatgccacgt atgctgggcg ctgacagtgc
     4681 gctggaaatc attgccgccg gtaaagatgt cggcgcggat caggcgctga aaatcggtct
     4741 ggtggatggc gtagtcaaag cagaaaaact ggttgaaggc gcaaaggcgg ttttacgcta
     4801 ggccattaac ggcgacctcg actggaaagc aaaacgtcag ccgaagctgg aaccactaaa
     4861 actgagcaag attgaagcca ccatgagctt cactatcgct aaagggatgg tcgcacaaac
     4921 ggcggggaaa cattatccgg cgcccatcac cgcagtaaaa accattgaag ctgcggcccg
     4981 ttttggtcgt gaagaagcat taaatctgga aaacaaaagc tttgtcccgc tggcgcacac
     5041 caacgaagcc cgcgcactgg tcggcatttt ccttaacgat caatatgtaa aaggcaaagc
     5101 gaagaaactc accaaagacg ttgaaacacc gaaacaggcc gctgtactgg gcgcaggcat
     5161 catgggtggc ggcattgctt accagtctgc gtggaaaggc gtaccggttg tcatgaaaga
     5221 tatcaacgac aagtcgttaa ccctcggcat gaccgaagcc gcgaaactgc tgaacaagca
     5281 gcttgaacgc ggcaagatcg atggtctgaa actggctggc gtgatctcca cgatccaccc
     5341 aacgctcgac tacgccgggt ttgaccgcgt ggatgttgtg gtagaagcgg ttgtcgaaaa
     5401 cccgaaagtg aaaaaagccg tactggcaga aaccgaacaa aaagtacgcc cggataccgt
     5461 actggcgtct aacacttcaa ccattcctat cagcgaactg gccaacgcgc tggaacgccc
     5521 ggaaaacttc tgcggaatgc acttttttaa cccggtacac cggatgccgt tggtagaaat
     5581 tattcgcggc gagaaaagct ccgacgaaac catcgcgaaa gttgtcgcct gggcgagcaa
     5641 gatgggcaag acgccgattg tggttaacga ctgccccggc ttctttgtta accgcgtgct
     5701 gttcccgtat ttcgccggtt tcagccagct gctgcgcgac ggcgcggatt tccgcaagat
     5761 cgacaaagtg atggaaaaac agtttggctg gcctatgggt ccggcatatc tgctggatgt
     5821 cgtgggcatt gataccgcgc atcacgctca ggctgtcatg gcagcaggct tcccgcagcg
     5881 gatgcagaaa gattaccgcg atgccatcga cgcgctgttt gatgccaacc gctttggtca
     5941 gaagaacggc ctcggtttct ggcgttataa agaagacagc aaaggtaagc cgaagaaaga
     6001 agaagacgcc gccgttgaag acctgctggc agaagtgagc cagccgaagc gcgatttcag
     6061 cgaagaagag attatcgccc gcatgatgat cccgatggtc aacgaagtgg tccgctgtct
     6121 ggaagagggc attatcgcca ctccggcgga agcggatatg gcgctggtct acggcctggg
     6181 cttccctccg ttccacggcg gcgcgttccg ctggctggac accctcggta gcgcaaaata
     6241 cctcgatatg gcacagcaat atcagcacct cggcccgctg tatgaagtgc cggaaggtct
     6301 gcgtaataaa gcgcgtcata acgaaccgta ctatcctccg gttgagccag cccgtccggt
     6361 tggcgacctg aaaacggctt aaggagtcac aatggaacag gttgtcattg tcgatgcaat
     6421 tcgcaccccg atgggccgtt cgaagggcgg tgcttttcgt aacgtgcgtg cagaagatct
     6481 ctccgctcat ttaatgcgta gcctgctggc gcgtaacccg gcgctggaag cggcggccct
     6541 cgacgatatt tactggggtt gtgtgcagca gacgctggag cagggtttta atatcgcccg
     6601 taacgcggcg ctgctagcag aagtgccgca ctctgtcccg gcggttaccg tcaatcgctt
     6661 gtgtggttca tccatgcagg cactgcatga cgcagcacga atgatcatga ctggcgatgc
     6721 gcaggcatgt ctggttggcg gcgtggagca tatgggccat gtgccaatga gtcacggcgt
     6781 cgattttcac cccggcctga gccgcaatgt cgccaaagcg gcgggcatga tgggcttaac
     6841 ggcagaaatg ctggcgcgta tgcacggtat cagccgtgaa atgcaggatg cctttgccgc
     6901 gcggtcacac gcccgcgcct gggccgccac gcagtcgggc gcatttaaaa atgaaatcat
     6961 cccgaccggt ggtcacgatg ccgacggcgt cctgaagcag tttaattacg acgaggtgat
     7021 tcgaccggaa accaccgtgg aagccctcgc cacgctgcgt ccggcgtttg atccagtaaa
     7081 cggtacggta acggcgggca catcttctgc actttccgat ggcgcagctg ccatgctggt
     7141 gatgagtgaa agccgcgccc atgaattagg tcttaagccg cgcgctcgtg tgcgttcgat
     7201 ggcggtcgtt ggttgtaacc catcgattat gggttacggc ccggttccgg cctcgaagct
     7261 ggcgctgaaa aaagcggggc tttctgccag cgatatcggc gtgtttgaga tgaacgaagc
     7321 ctttgccgcg cagatcctgc cgtgcattaa agatctcggg ctaatggagc agattgacga
     7381 gaagatcaac ctcaatggtg gtgcgatcgc gctgggtcat ccgctgggct gttccggtgc
     7441 gcgtatcagc accacgctgc tgaatctgat ggaacgcaaa gacgttcagt ttggtctggc
     7501 gacgatgtgt atcggtctgg gtcagggtat tgcgacggtg tttgagcggg tttaaccact
     7561 tgccggatgc ggcgtgaacg ccttatccgg tctaccgatc ctgcaccaat gtaggcctga
     7621 taagacgcgc cagcgtcgca tcaggcatcg tgcaccgatt gccggatgcg acatagatct
     7681 aaatgccact gaataaagtt ttagttgccg ttcttcccgc ctgtcagggg cgggtttttt
     7741 tatatctcag ataaatgcaa acgcatcgcc aaacagacga tcttcccgcg cattacgctc
     7801 actgcaaaac aggtcacgag caattttcgc catctcaaaa cgtccggcaa tatagatatc
     7861 atgctctgcc agcgtaccat gatcctgcaa gaccgccgtt aacacggtgc cagtacgccc
     7921 acgccagccc gcttccggtt gttcaaccac cggcaccaca cgcaggccag gatgcttcag
     7981 cgaaagcgcc tcaagctcgg agagatcata aagatgttgc tcctcacgcc caccccagta
     8041 aatggtgata tcgcgattgg gattacgcgc caacgccgtc aataaaatcg agcgcgcata
     8101 ggagaacccg gtgccgcccg caatcaaaat catcggacgc tcttcatcat cgcgcagcca
     8161 cgcttctccg tagggaatat cgaccacgat ttgataatct ttgaggatgc ggtccatgac
     8221 tgctttcgcg taaaggttga tttcagaagc gccaatatgc agctctataa accctttttc
     8281 atccggcgtc gaagccattg aaaacggacg tttgtcgcgc tcatccatca ctaccatcaa
     8341 atactgacca gcacgaaaag aaaaggccgc gtctggcacg atgcggacac gatatacggt
     8401 atccgtgata gcttctaccg aggtcacttt acagcttaag gttgtcatgc gctttctctg
     8461 tcggatcgat aaatagggca aaacaaacgc gcatcaggcg cttttaccgt tgttaaaaat
     8521 agccagttca tcccagatgg cgtcaatatg cgcgacaaca tctggatctt ttttgatggg
     8581 acgtccccat tcacgctggg tttcccccgg ccatttattc gtggcatcca gccccatttt
     8641 tgaacccagc ccggagacag gcgaggcaaa atccagataa tcaataggcg tattttctac
     8701 cagaacagta tcccgcgccg ggtccatacg ggtggtaatc gcccaaatca catcgttcca
     8761 gtcgcgtgcg ttgacgtcat catcgcaaac gatcacaaat ttagtgtaca taaactggcg
     8821 taagaacgac cagacgccca tcatgacgcg cttcgcgtgt ccggcgtact gttttttgat
     8881 cgtcactacc gccagacgat aagaacagcc ttccggcggc aggtaaaaat cgacaatttc
     8941 cgggaactgt ttttgcagaa tcggtacaaa cacttcgttc aacgccacgc ccagtaccgc
     9001 gggctcatct ggcggacgcc cggtataggt ggaatggtaa atcgcatctt cacgctgggt
     9061 aatatgcgtc acggtaaata ccgggaaact atcgacttcg ttatagtaac cggtgtggtc
     9121 gccatacggc ccttccggcg cagtttcgcc ttgttcgata tacccttcca gcacaatctc
     9181 cgcactggcg ggcacttcaa ggtcattgga gatacacttc accacttcgg tcttggtacc
     9241 gcgcagcaat ccggcaaacg catactctga aagtgtatcc ggaacggggg tgactgcacc
     9301 gagaatcgtg gcgggatcgg cacccagcgc cacagaaacc gggaaacgtt cgcccggatg
     9361 cgccgcacac cactcctgat aatccagcgc gccgccgcga tgcgacagcc agcgcataat
     9421 cagtttgttt ttaccaatca gctgctggcg ataaatgccc agattctgcc gctctttatg
     9481 cgggccgcgc gtcactgtca gcccccaggt aatcagcggt gcggcatctt ccggccagca
     9541 ggtcataatg ggaatgcgat tgagatcgac gtcatcgcca gagacgattt tttgttggca
     9601 gggcacacca cgcagccgct ttgtcggcat gttcaatact tgcttaaact gcggcagttt
     9661 atcaaacagg tcgcggaaac cttttggcgg ctccggctct ttcagaaacg ccaataattt
     9721 accaacttca cgcagcgccg aaacatcttc ctgtcccatg cccatcgcca cgcgctttgg
     9781 cgtaccgaac aggttgcaca gcaccggcat tgagtagcct ttagggtttt cgaacaacag
     9841 cgcaggccca ccggcacgca aagtgcggtc agcaatttca gtgatttcca gatgcggatc
     9901 caccgggagc gtgatacgtt ttagctcacc ctgctgttca agcagcgtca agaagtcgcg
     9961 taaatcgtta tatttcatgg cgtccattgt agcctcttaa tctacgccca ttatacggcg
    10021 ttcatctttg cgatgctgta aatttgttaa attagcgtga actctgacgg tataacgcaa
    10081 accggggaat ataattaact tagcgtaaag cttttgctat ccttgcgccc cgattaaacg
    10141 gataagagtc attatgcaat cctggtattt actgtactgc aagcgcgggc aacttcaacg
    10201 tgcccaggaa cacctcgaaa gacaggctgt gaattgcctg gcaccgatga tcaccctgga
    10261 aaaaatcgtg cgtggaaaac gtactgcagt cagtgagcca ttgtttccca actacctgtt
    10321 tgtcgaattt gatccagaag tgattcatac cacgactatc aacgcgaccc gcggtgtcag
    10381 ccacttcgtg cgctttggcg cgtcgccagc gatagtccca tcggcggtga ttcatcagct
    10441 atcggtatat aaaccgaaag acattgtcga tccggcaaca ccttatccgg gtgataaggt
    10501 gattattacc gaaggcgcgt tcgaaggctt tcaggccatt ttcaccgaac ccgatggtga
    10561 ggctcgttcc atgctattgc ttaatcttat taataaagag attaagcaca gtgtgaagaa
    10621 caccgagttc cgcaaactct aaaacgcaat cccaaacagt gttttgacat tggcatccgt
    10681 ggtggcagcc agccatgcgg catcttctcc acgccagtgc gcaatacgtt gcaaaatatg
    10741 gtgcagatgg gctggctcgt tgcgccggga tgatggcttt ggcgtgaaat cgcgcgggag
    10801 cagatacggc gcatcagttt cgatcagcaa tttctccgcc ggaatcaacg gcaacaattc
    10861 ccgcagctcc agcccgcgtc gttcatcgca aacccaaccg gtaatgccga tataaattcc
    10921 acgcgccacg cacgcctgca tctcttcgcg tgtgccggta aagcaatgaa gaaccgcacc
    10981 aggcagttta tccagccacg gctccagcaa tgtcataaac cgctcgtggg catcgcgaca
    11041 gtgcataaat accggcatgt ttaattctgc ggcaatgcgt agctgagcaa caaaagcgcg
    11101 ttcctgctct tccggcgtcg aaaagttgcg gttaaagtcg agaccacatt caccaatcgc
    11161 caccacttct ggctgcgagg ccagctcaat aatcgcttct tcagtcgcag cttgccactg
    11221 gctgctgtcg tgaggatgta cgcccgccgt tgaccaacag gacgaatact gacgcgccag
    11281 cttttgcgcc tgctggcttt cacgcaggtt agtgccggtg atgagtagcc cattaactcc
    11341 cgcgtcaaaa gcgcgcgcta caacatcatc acggtctttc gcaaattgcg aactggtcaa
    11401 attaacgccg atatcaaaca tcctgtactc catatgacaa ccgccctgac gggcggttga
    11461 atttattctt cagttttttc gctttctgct tcagcgtcgt tttcctcttc ccgatttcgc
    11521 cctttaccaa cgtaaaagcg tgagaagaag acaccgattt caaacagaca gtacatcggg
    11581 atcgccaata gcgtttgcga gaagacatcc ggcggcgtca gcaacatccc gacaacgaat
    11641 gcaccaacca gcacatacgg gcgttttttg cgtaagtctt ctggcgaggt aatccccatc
    11701 cagcacagca gcacaattgc caccggcact tcaaaggaga caccaaacgc cataaacagc
    11761 gccataacga agcttaaata gctggcgatg tcggtggata cctgcacccc ttccggcgcg
    11821 gtattggcaa ggaagccaaa tgccagcgga aagaccacaa agtaggcgaa tgccatgccg
    11881 atataaaaca gcagagagct ggaaaccagc agcggcacca ccaggcgacg ttcatgctta
    11941 tacagcgctg gggcgataaa tgcccacacc tgatagagaa tcaccggcgc tgacagaatc
    12001 agcgacacca taaaggtcag cttgatcggc gtaaagaacg gcgaggccac gtcggtggcg
    12061 atcatcgttg aaccttgcgg caactgcttg atcaatggcg cggataccag gtgatagatg
    12121 tcattggcga aatagaccag acacaggaat atcacgatca ccgcgataat gcagttcagc
    12181 agacgcttac gcagctcaat tagatgcgtg ataagcggtt gagtatcttc tacagacatg
    12241 tttacggttt atcactcgac gaaggggaag gtgcagcggt tttcggttca gcgtccgcag
    12301 caggttttac caccggctct ggcgtggttt ctggcttctg ttccggcgaa ctggcctgcg
    12361 tttgtgcagc ggcaggcgtt acgccctcat gcgcagcttc attatctttc accaccgggt
    12421 tatggatggt gtgcgcttca tcgctcgcct tttctggatc gtttgcaacg taggaacgct
    12481 tcatcgactc cgcggcctgg cgtagttcat ccatcgacgc tttcagttcg ggcgtcaggt
    12541 tagtgaggct cgccttttca acctttttca gactgtcctg aaactcctgg agttttaact
    12601 cctggatcag ttcgttctgc accgttgtcg ccagtgaacg caacgcgcga atccagcccg
    12661 ctaccgtttt taccgccaca ggcagtcgtt gcggccccag aacgacgagg ccgatgatga
    12721 acaccaatag cagttcgcta aaaccgatat caaacacgga ttacacctgc tctttatcgt
    12781 ggcgcttcgc gtcttctgtt ttagcctgtt cctgattcgt atccgcctgc ttatcggcga
    12841 tagttttcgc agtaaaatca gcatcctgac tggttttatc ctgctttggt tcatcatcgc
    12901 tcattgcttt tttaaagcct ttgatcgacg caccaagatc ggaaccgatg gagccgagct
    12961 ttttggtgcc aaaaagcagt acaacgatga cggcaataat caataactgc caaatactga
    13021 taccacccat acatgttcct ctgtggtaga tgatgattaa acaaagccgc attatacgtt
    13081 acacggcccg ccttgagcga tgaaaaaatc agcgtgtttt gcgccaaccg acaaaccagg
    13141 cgatcagacc acctgccatt aaccagccgg gcatcagccc ccactcaggt cggctgacca
    13201 acaagaatgt gccacttaat actaacgtag cgccaattcc gagaaaataa cgcgattgtc
    13261 cctgacgtac atgatttgac tgaagctcgc gggcaatctt atcaacactg tgctgtaaat
    13321 acttgccctg gcgcaaactg tcgtaaacca attcaggcag ttctggcatt ttttcgaccc
    13381 agaacggcgc tttttcttta aatgctctca ccagcgcagg aataccgacc tgatctttaa
    13441 tccacgactc caggaaaggc ttcgctgttt tccataaatc gagctgcgga taaagctggc
    13501 gtcctacccc ttcgacatag agcagggttt tctggagtaa caccagttgc ggctgcactt
    13561 ccatattgaa gcgacgcgcc gtattaaaca gatttaacag tacatgtcca aacgaaattt
    13621 cggccagcgg tttctcaaag ataggttcac agaccgtacg aatggcaaat tcgaactctt
    13681 caacgttggt atctggtggc acccagcctg aatcgacgtg tagctctgcc actttgcgat
    13741 agtcgcgatt aaagaaggcg ataaagtttt ctgccagata gcgtttatct tctttgttta
    13801 gcgagccaac aatcccgcaa tcaatgccga tatatttcgg gttttccggg tgttcatagc
    13861 ttacgaagat gttgccaggg tgcatatcgg catggaaaaa gctgtcgcga aagacctgag
    13921 tgaagaacac ctgcacgccg cgttccgcca gcaatttcat gttagtgccg tttttctcca
    13981 gcgccgcaac atcagacacc ggaatgccgt aaatgcgctc catcaccatc atcccttcac
    14041 tacaatagtc agggtaaact tccgggatgt agagcatcgg gctgtcttca aaattgcgcc
    14101 gaagctgaat ggcgttggca gattcccgca gcaaattcag ttcatcaatc aaggtctttt
    14161 cgtactcgcg caccacttcg gttgggcgca gacggcgacc atccggcagc aaacgcggca
    14221 cccagcgagc cagacggtag ataagtttca gatccgcttt aatgaccggc aaaatatccg
    14281 ggcggatgac tttaatcacc acctctttac cattcgattt caatcgcgcg gtatgaacct
    14341 gggcgataga agcagaagcc agcggcttga tttcaaaatc gtcaaaccac gcttctaccg
    14401 gcaagccgcc cattgcagct tcaatctgct gcttcgccag cttgccatca aacggagcta
    14461 ctttgtcctg caataacgcc agctgatcgg caatatgcgg tggaaaaaga tcgcggcggg
    14521 ttgataacat ttgcccgaac ttgatccaaa ccggccccag ttcttgcagg gccagtcgta
    14581 gtcgctcacc taaaagtttg tctttatgcc gatttggcat ccagaataat gagtatcgcc
    14641 atagccgtag cggcagggtg atacgcattt tggggatcag ttcatcaagt ccgtagctta
    14701 aaaaagtgcg aatgatgaaa tataggcgcc gtacttcacc tggcgtcatt tagcctccag
    14761 tttttccagc cgtttggtca gggcatcaac agcacgctcg acggcagccg tctcttccgc
    14821 aaaccaggcc acttcaagcg gaccgggtgc catacgccac tcttcagtaa tggcttccgc
    14881 cacataacgt tgctggcgct taatgccgtg atgcaggaac tttgcgcctc cgcgcatggc
    14941 tttgctgatt ccttcagcgg cgatatcacc ggtataaggg gccagcagtt ccgcagggtc
    15001 gaactctgcc agatctgcca gcgcaacgaa gttttgcacc acctgaatat cgccctgcac
    15061 ttccagctca ccactgcgaa tcagtgcggt aagctgctgg cgatcgcgaa gtttcggcaa
    15121 cacactggcg taggcgataa cggtgcagtc agcatcgcct gcccattcgc ccagtacatc
    15181 aacctggcgt tcgctgaaca ccagaatcaa tgacgtcgaa aagcctttta cctccacgcg
    15241 caatacttta cccagcagac gcgagcgggc tgttttcagc gcgggtgagc gatacaggaa
    15301 ggtgttgagc agactttcaa ttcctgccgt cactaaaggt ttaaaaggca tttccggtct
    15361 cctgtcagaa cttataacca cgatgcagcg ccacaacccc tgccgtcaga ttgtagtagt
    15421 cgacactttc gaatccggca tcctgcatca tggctttcag ggtatcctga tcgggatgca
    15481 tacggatgga ttctgccaga taacggtagc tgtcggcgtc gttcgcgacc agtgagccaa
    15541 tacgcggcag cacatggaag gagtatgcat cataggcttt gctcagcggc tcgataattg
    15601 gcttcgagaa ctcaagcacc agcaggcggc cgccgggttt cagcacgcga tacattgaac
    15661 gcagtgcttt atctttgtcg gtgacgttac gcagaccaaa cgaaatggtg atgcaatcaa
    15721 aggtgttatc cgggaacggc agcgcctcag cgttcgcctg aacatactca acgttgccaa
    15781 tcacaccgat attacgcagc ttctcgcgtc ccattttgag catggattca ttgatatcag
    15841 caaggaccac tttgccagtt tctccgacca ggcgggagaa tttcgctgtc aggtcgccgg
    15901 tgccaccagc cagatccagc acggtctgcc cacggcgtac gccgctgcaa tcaatcgtga
    15961 atcgcttcca caaacgatga ataccaaatg acatcaaatc attcatgaca tcgtattttg
    16021 atgccacgga atggaaaacg tgggcgacca tatccgcttt ttgttccttc gcgacggtct
    16081 gaaaaccaaa gtgcgtcgtt tcttgtgact tatccaccat ctcaatgcct gctcatcaaa
    16141 aaattgttcc agaagtgtaa cagattgggc gtcgatgccc tagatttcta cccggcttaa
    16201 ctacccctaa tgggctagcg cgactgctga ttatattcat catcgcgttg ataagcttca
    16261 tcattcggct gctccggaac cgaccgaagt cgatactctt catcctggct caccgcctgt
    16321 tcagccaaat ccggattaat ctcgcgttta atttctactc ctaaaccgcg aaacgcttct
    16381 gcctgcgcca gcacatttcc gcgacctgaa gagagttttt tcattgcctg gcggtagtta
    16441 tcctgcgctt tgtcgagact ttgaccaatc gcggacatgt catcgatgaa caaacgcatc
    16501 ttgtcgtaca gcttgctggc acgatcggcg atttgctggg cgttgcggct ttgatgctca
    16561 taacgccaca ggttggcaat agtacgcaac gccaccagca gcgtagtcgg gctaaccagc
    16621 atgatattgt ttttcaacgc ttcggtgatc agctccggct ggcggtcaag cgccagtaaa
    16681 aaagcgggtt caacgggaat aaacatcagc acgtaatcca gagttcgcag ccccggcagc
    16741 tgttgataat ctttgcgtcc cagcaaacgg atatggttac gcaccgacgc gatatgttcc
    16801 tgtagcgcgc tttcgcgggt gtagtcgtct tcggcgttaa aatagcgttc ataggcgacc
    16861 agcgtcattt tggcgtcgat caccacatct tttccctgcg gcagccgcac gatgacatcc
    16921 ggctgcatcc gcgagcgggc gtcattttcg atgctgacct gggtttcata ttcataccct
    16981 tcacgcagac cggaagcctc cagcacccgc gtcaatacta cctcgcccca gttgccctgg
    17041 gttttattgt cgcctttcag cgcgcgcgtc aggttgatcg cttcctgggc catttgcgcg
    17101 ttgagttgct ggagattgcg aatttcgtgg gtcagggtat ggcgttcttg tgcttcttta
    17161 ccgaagctgt cctgaacctg acggcggaaa ccgtccagtt gttcacgtag cggcgacaac
    17221 aggctgttca gactctgacg gttttgctca tcaacccggc gattgctgtg ctcaaaaata
    17281 cggttggcga ggttttcaaa ctgctcactg aggcgctgct cgctgttaat catctggcga
    17341 attttatcgt cagcatgttg ctgtgcggct tccatccgcg tggttacttc acgcagatcg
    17401 gcctccagag aggtgttaat actttgcagg ctgcgcactt cgttattgag taactcgcac
    17461 tctgcacgcc agtgctcgct ttgggtaatt tgttgttttg ccgcgcttaa ctccgcgacc
    17521 atctcttcac gttcagctaa ttgctcggct ttttgctgcg catgttgata actggcaaac
    17581 agccagccaa ttgccacacc caccaacgca ataactgcgt aaaccatgat tgagaaatcc
    17641 acaacgcctc ctgacgcaac aacttacccg cacaaaatag aattgtgctg tacaaacgtc
    17701 cagttggaaa ggcatttcct gcgaggcgct acgcaaaaat acaaaaggcc gaacgcgtcg
    17761 gccttcagac aggagaagag aattacagca gacgacgcgc cgcttccacc acgattttca
    17821 ccgcttggct ttcagtttgt ttcatcgtct cagcattcgg gatctcttgc tgggtgcggt
    17881 taacgataac acccgctacc ataccggcac gcaggccctg acttgcacac atggtcagca
    17941 gggttgcaga ttccatttca tagttcatta cgcccatcgc ctgccactct tccatagaac
    18001 ctttaaagtg acgaactacg cgaccagagt aagtatcgta acgttcctgg cctgggtaga
    18061 aggtatcaga agaagctgtc acgccaacgt gagttgtcgc gccaatggat ttcgcagctt
    18121 caaccagcgc agtcgtacat tcgaaatcag cgacagccgg gaattccagc ggtgcgaagt
    18181 gcaggctcgc gccatccaga cggacagacg ccgtggtaac caggacatca cccacattaa
    18241 tatgcggctg aatagcgccc gttgtaccga tacgcaggaa ggtgcgaatg cccagctgtg
    18301 ccagctcttc aacagcaata gaggtagacg ggccgccgat accggtagag cagacgataa
    18361 caggtttacc atccagctct gcacgccagg tggtgaattc gcggtgagat gccagcttaa
    18421 ccggcttatc catcagcgcg gcgatctttt ccacacgatc cgggtcgcca gggacgatgg
    18481 caagcgtagc cccttgtaaa tcgtttttag tgaggccgag atgaaaaaca tcagacttgg
    18541 acatatacaa ctcctctgtg aatcggttta gtcagaagaa gcaaaaagac actttaccga
    18601 agggtttaac attttttcgt gatactcatc accatgacgc aaatgcgttg cataaattta
    18661 cccaccaaaa gtgatgcaaa tcacataaat cactcttcat tctgcaggac tgcataaaag
    18721 atgagccgat tcaggcaatg tgatttgttg catgctgact atagttaaca ttgcgcaaca
    18781 tttttataag ggtacggaga ataccatggc aacaacacaa caatctggat ttgcacctgc
    18841 tgcatcgcct ctcgcttcga ccatcgttca gaccccggac gacgcgattg tggcgggctt
    18901 cacctctatc ccttcacaag gggataacat gcctgcttac catgccagac caaagcaaag
    18961 cgatggccca ctgccagtgg tcattgtagt gcaggaaatt tttggcatgc atgaacatat
    19021 ccgcgacatt tgtcgccgtc tggcgctgga ggggtatctg gctatcgcac ctgaacttta
    19081 cttccgcgaa ggcgatccga atgattttgc cgatatcccc acgttgctta gcggtctggt
    19141 agcaaaagtg cctgactcgc aggtgctggc cgatctcgat catgtcgcca gttgggcttc
    19201 ccgcaacggc ggcgatgttc atcgtttaat gatcaccgga ttctgctggg gtggacgtat
    19261 cacctggctg tatgccgcgc ataatccaca gctaaaagcc gcagtggcgt ggtacggcaa
    19321 actgacgggc gacaagtcgc taaattcacc gaaacaacct gttgatatcg caaccgatct
    19381 taacgcgccg gttctcggct tatatggtgg tcaggataac agcattccgc aggagagcgt
    19441 tgaaaccatg cgccaggcgc tgcgggctgc taatgcgaaa gcagagatta tcgtgtaccc
    19501 ggacgccggg catgcattca acgctgatta tcgcccgagc tatcatgccg aatctgcgaa
    19561 agatggctgg cagcgtatgc tggaatggtt taagcagtat ggtgggaagc ggagttagtt
    19621 tcctcttagt ctatatttga gatggtgagt gaacgagtgc gttttgctgc catctctgtc
    19681 ccccaaaaaa taatcagtat gaattgattg gagattacga ctccgctatt tgaccttaag
    19741 aaagtcggca agtcatagtc ataaatgagt ctcttcaatg gaagacacct tagagattta
    19801 ccatctactc ccattcacaa acaaacatta attattatca acacattcac attaattata
    19861 aatcatctca gaccttcctg ataaaaagat attaaagtga aacattttgt ttttcacatt
    19921 ttagttcatc acttttaggc gtaaataaag gtaaaaaaaa caacaatact atttctcttt
    19981 cacaaaagaa ttaacaaaag gttttttaag gatgagtgat attatttact tgaccataac
    20041 cggagaacaa caaggatgta tttcctctct ttgtggaacg agcgcatcaa taggtaatcg
    20101 ctggcagatt ggccatgaag atgaaatctt cgcgttctcg ctctctaata gtattacgaa
    20161 tgcaggcaaa gggtcacaat tgcatggcct tagtttctgt aaattcttat taacgctatt
    20221 aacaataacg agcagttgtt catggcgttt gacttctatc ggatcaatag atttggtcga
    20281 tgggagaaat attacaacat tcaactccgc ggcgcgctct tatcagcaat caatcacctg
    20341 tttactgaga acaatctgga tacagaagcc atcactgtca gttatgaata tatactctcc
    20401 aggcatctga ttgctaatac tgaatttagt tatttggcat ttcccgataa ctacaaccgt
    20461 ctgtttatac cacggccaaa aactaaagct ggtaatggtt caaaacactt aatagtaaag
    20521 cggttggcag actgcttgct gctggcggca tatacaatgg gaatatcgaa ggattcaggg
    20581 aaacagcaga caagttgggg ggagatgcac ctgctggtta cgatcaattt atggataaca
    20641 aagggttact catcgctggt gcttcaatag ttgctggagc agttctgggg agaatgagac
    20701 tccctgattt ggaatcactt gagcatttcg gagccagagg agcagtatca gga
//
LOCUS       DADMIB010000063        20720 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.063, whole genome shotgun sequence.
ACCESSION   DADMIB010000063 DADMIB010000000
VERSION     DADMIB010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20720
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.063"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(73..4533)
                     /gene="mukB"
                     /locus_tag="JNZ89_002175"
     CDS             complement(73..4533)
                     /gene="mukB"
                     /locus_tag="JNZ89_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HAY8936051.1"
                     /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
                     AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
                     GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM
                     EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
                     DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR
                     HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS
                     DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQEENEARAEAAELEV
                     DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADSAAEWLETFQAK
                     ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ
                     RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI
                     ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS
                     SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG
                     GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLDGLTDCPEDLYLIEGD
                     PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS
                     ERFATLSFDVQKTQRLHQAFSRFIGSHLAVVFESDPEAEIRQLNSRRVELERALSNHE
                     NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ
                     FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY
                     SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT
                     KKELLNDLQRELQDIGVCADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE
                     MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL
                     RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAAYQHLRERIRQDIIR
                     TDDPVEAIEQMEIELSRLTEELTSREQKLVISSRSVANIIRKTIQREQNRIRMLNQGL
                     QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN
                     PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
                     VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE
                     NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS"
     gene            complement(4533..5237)
                     /gene="mukE"
                     /locus_tag="JNZ89_002176"
     CDS             complement(4533..5237)
                     /gene="mukE"
                     /locus_tag="JNZ89_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HAY8936052.1"
                     /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH
                     AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
                     YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
                     RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ
                     LNDETEENQPDSGEEE"
     gene            complement(5218..6540)
                     /gene="mukF"
                     /locus_tag="JNZ89_002177"
     CDS             complement(5218..6540)
                     /gene="mukF"
                     /locus_tag="JNZ89_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HAY8936053.1"
                     /translation="MSEFSQTVPELVAWARKNDFSISLQVDRLSFLLAVATLNGERLD
                     GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
                     LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL
                     KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
                     QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
                     YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR
                     DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA
                     RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
     gene            complement(6537..7322)
                     /gene="cmoM"
                     /locus_tag="JNZ89_002178"
     CDS             complement(6537..7322)
                     /gene="cmoM"
                     /locus_tag="JNZ89_002178"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine 5-oxyacetic acid(34)
                     methyltransferase CmoM"
                     /protein_id="HAY8936054.1"
                     /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ
                     KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA
                     QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM
                     VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK
                     HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV"
     gene            7458..8237
                     /gene="elyC"
                     /locus_tag="JNZ89_002179"
     CDS             7458..8237
                     /gene="elyC"
                     /locus_tag="JNZ89_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope biogenesis factor ElyC"
                     /protein_id="HAY8936055.1"
                     /translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTAKIFIS
                     IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI
                     NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
                     LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL
                     NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGPSGEPRQE"
     gene            complement(8214..9107)
                     /locus_tag="JNZ89_002180"
     CDS             complement(8214..9107)
                     /locus_tag="JNZ89_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbJ family phosphotransferase"
                     /protein_id="HAY8936056.1"
                     /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM
                     ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA
                     PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQEHFWPSWYRQHVEVLWTTLN
                     QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV
                     GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN
                     TGRFSRRNFDLASKSLLPWLA"
     gene            complement(9261..10007)
                     /gene="kdsB"
                     /locus_tag="JNZ89_002181"
     CDS             complement(9261..10007)
                     /gene="kdsB"
                     /locus_tag="JNZ89_002181"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HAY8936057.1"
                     /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER
                     IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP
                     MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
                     PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYG
                     EKIHVAVAQEVPGTGVDTPEDLERVRAEMR"
     gene            complement(10004..10186)
                     /locus_tag="JNZ89_002182"
     CDS             complement(10004..10186)
                     /locus_tag="JNZ89_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YcaR"
                     /protein_id="HAY8936058.1"
                     /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
                     LLETEARVLTADESKS"
     gene            complement(10238..11470)
                     /locus_tag="JNZ89_002183"
     CDS             complement(10238..11470)
                     /locus_tag="JNZ89_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HAY8936059.1"
                     /translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLL
                     QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH
                     RMLALEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
                     KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS
                     LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHADLLPLLERAL
                     AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ
                     LVGRMDAKMHRQTGILEVISLWLQEGIKPTTMLQKGLRQAITDFASWQQATRVTLGRC
                     PQGLFTDCRTGWEIDPVA"
     gene            complement(11507..12493)
                     /gene="lpxK"
                     /locus_tag="JNZ89_002184"
     CDS             complement(11507..12493)
                     /gene="lpxK"
                     /locus_tag="JNZ89_002184"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HAY8936060.1"
                     /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA
                     PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGSKAESYPLLLSADTT
                     TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE
                     IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL
                     RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV
                     SAGQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTSLASGN"
     gene            complement(12490..14238)
                     /gene="msbA"
                     /locus_tag="JNZ89_002185"
     CDS             complement(12490..14238)
                     /gene="msbA"
                     /locus_tag="JNZ89_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HAY8936061.1"
                     /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM
                     LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR
                     RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
                     FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL
                     IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
                     DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV
                     IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
                     YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI
                     EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
                     SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL
                     EHRGVYAQLHKMQFGQ"
     gene            complement(14379..16547)
                     /locus_tag="JNZ89_002186"
     CDS             complement(14379..16547)
                     /locus_tag="JNZ89_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC family protein"
                     /protein_id="HAY8936062.1"
                     /translation="MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPV
                     KTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQ
                     GRRIFPAPGLVLYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL
                     IGRFLQASVIEPNCSLRAQYLASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRD
                     TGTAHLMAISGLHIAFAALLAAGLIRGGQVFLPGRWIHWQMPLIGGICCAAFYAWLTG
                     MQPPALRTVVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAV
                     AALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANL
                     LAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIA
                     ERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVYMLDVGQ
                     GLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGL
                     DSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSVHWPLQASNDKGNNHSCVVK
                     VYDGTNSILLTGDIEVPAEQKMLSRYWQQVQTTLLQVPHHGSNTSSSLPLIQRVNGKV
                     ALASASRYNAITHGDCPLIKLSIAINSKDINGLILHIRVK"
     gene            complement(16754..17038)
                     /gene="ihfB"
                     /locus_tag="JNZ89_002187"
     CDS             complement(16754..17038)
                     /gene="ihfB"
                     /locus_tag="JNZ89_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HAY8936063.1"
                     /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE
                     IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
     gene            complement(17198..18871)
                     /gene="rpsA"
                     /locus_tag="JNZ89_002188"
     CDS             complement(17198..18871)
                     /gene="rpsA"
                     /locus_tag="JNZ89_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HAY8936064.1"
                     /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
                     ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
                     EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
                     QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
                     GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
                     IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
                     LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
                     GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV
                     DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
     gene            complement(18982..19665)
                     /gene="cmk"
                     /locus_tag="JNZ89_002189"
     CDS             complement(18982..19665)
                     /gene="cmk"
                     /locus_tag="JNZ89_002189"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HAY8936065.1"
                     /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
                     LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ
                     VATFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
                     QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ
                     YARQKLALA"
     gene            complement(19838..20601)
                     /locus_tag="JNZ89_002190"
                     /pseudo
     CDS             complement(19838..20601)
                     /locus_tag="JNZ89_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706828.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
BASE COUNT         4991 a         5724 c         5034 g         4971 t
ORIGIN      
        1 tatgtgccat ttttttagtg cagaaacgga gttttcggaa aaagaaaagg cggcattgct
       61 gccgccttaa ttttaactcg cctgagaagg cgcttcgtca gttcctggaa gcgtttcagg
      121 gagttgcggc gcaaatcctc gcaggccgac gacatgaaca tgttcggtat tctggaagac
      181 tttacgcacc agtttatagg tggtgccttt ctccgggctg atattttccg gcgctgcgat
      241 gatgagctgc atttgcaaac gctcacacaa ttcaaacagc gtggcgatag aacgagcatc
      301 cagtcgcgct gcttcatcga ggaacagcag acggcaagga gagatatctt taccgcgcag
      361 gcggcgagat tcatcttccc agctttgtac caccatcacc agaatcgaca taccggtacc
      421 aatcgcctca ccggtcgaca atgcaccaga ctctgcgcgc aaccaaccat cggaaccacg
      481 gttaacctca acttccattt ccagatagtt gcggtaatcc agcagttctt cgccaatggt
      541 ctgcggcgtg cgctgcccca tatcaatctg cggattaaga cgctgataca atttcgccaa
      601 cgcttccgag aaggtcagac ggttgctgtt aaacagatcc tgatgctgct cgtgctgttc
      661 agagagcaca tccagcagca tggcgtgcgt ttcacgcacg ttcacgttga ggcgcacgct
      721 gttcacctga ccaaacgata cgttctgcaa cccctggttg agcatacgga tacggttctg
      781 ctcgcgctga atggttttgc gaatgatgtt cgccacgctg cgggaactga tcaccagttt
      841 ctgttcacgg gaggttaatt cttcggtcag acggctaagt tcgatctcca tctgttcgat
      901 agcttccacc ggatcatcgg tacgaataat atcctgacga atacgttcac gcagatgctg
      961 ataagccgcc acgaagaact gaattttacg ctccggacgt ttcggatctt ccgacatgcg
     1021 cagcacgtcg cgcagatgtt cgttatccgc caccgccaga cgcagcgcac ccaatgcctt
     1081 atccgacata gagcgcaaat catcagcgga gagataagcc agctcacgac ggtgtaagcg
     1141 gcgctcaacg ccgttatctt tcaccatgcg catcaccgca caccagcccg ctttggcggt
     1201 cactacctgc tcgcgcatct caaagtaatc ccgctccagc ttgcgcagtt tgcgggtcag
     1261 gttgtccatc tccgcttcgc agaaggtaag cgctttttcc agttgattgc ggcgtgaacg
     1321 gttattgctc agttgcgcat gcagctcgtc acggcgaata cgcgcccgct cttctgcccc
     1381 gctatcagca cacacgccga tatcctgcaa ttcacgttgc agatcgttga gtagctcttt
     1441 tttggtgtcg taagaacttt tcagcgaagc cagcacctgg ttgtactgac tcaactgcgc
     1501 tgcgtgaccg cgcaacgctt cgcgagcgcg ggtacgctcc gcttccgcct gttccagacg
     1561 ttcacgcagt ttttcgttga gatcgctgtt accgctaagc atttctgccg agtcagagta
     1621 gctaaagtgc gcacgacgct gcaccacttc cgtcagggca aacgcctgct gacgggcatc
     1681 gcgctgcatc tgttgagagt acgcgtaatc ttcttttaac tgttcgaact gttccgggtc
     1741 gctctgcaat accgaaacga tcggttccag tttcgccagt tgattgccaa actgctgaac
     1801 aaaacgcgcg gcttcctggg cttcatccag acgttcgcgg atttcatcga cgcgatccgc
     1861 caggctatca tcagccaaca ggttgagacg cggcagaatg cggttcagcg ccgtaacgcc
     1921 ctctttcgcc tgctcaaact gaatacgctg ctgctggtta tcattttcat gattacttaa
     1981 cgcccgctcc agttcgacgc gacggctgtt cagttgacgg atttctgctt ccgggtcaga
     2041 ctcaaacaca accgccagat gactgccgat aaagcggctg aacgcctgat gcagacgctg
     2101 agttttctgt acatcaaagg agagcgtggc gaagcgttcg gaaagcactt cacgctcggc
     2161 atggaggctt tcaatacggc tttcacgcgc agcacgacca aacagcggca cttccgggaa
     2221 acgtgaataa cgccactgac gatcggcgat tttcaccact accgcttttt ccagctcatc
     2281 aacgctgaac acgctgtcat cgaatgactg cggatctcct tcgatcagat agagatcttc
     2341 cgggcaatcg gtcaagccat ctaggtgttc agttacctgt gacagatctg gcaccacgat
     2401 ggcgtggcgt gacgggccat acagcgctga gaagtacggc gcatcttcca ggctaacgtc
     2461 gtcataaatt tctgacagca gcacaccacc aaaacgctcc gccagcgcgt tcagacgctg
     2521 atcttcagag ccgccaggct ggcttaaacg ttcgatctct tcatcgacgg cgtttttgcg
     2581 cgcgcccact tcatcgcgtt caacaatcgc ctctcgctca cgctccagca actgttgcag
     2641 atattcggtg acgtcctggc tggaggtaaa ctcttcgccg cactgttcgc tcaactggtt
     2701 gagactgttt tgcgctgcca gccaaaccgg cgcacgctgc atcaaactct gaatgcgaga
     2761 ctgcagctgt tcctgctcct ggcgcagtgc catgcgctct tcacgggcgt tagacacgct
     2821 atcggaaaga gaggcaatgc gtgcttccag ttcctgatgc agggcttcca gttcgtcgat
     2881 atcaaaattc ttgccctgac gtttgcagaa atctgccagc agacgctcag cttcttgctg
     2941 ctcgcgtaga cgctgttcca gttcgcttaa tcgcatccgc agcggctgaa cctgctctgc
     3001 caggtgacgc tgatcgaccc cttcgcgcaa tagttcgcga gcgacatccc acgcctcgtt
     3061 acgcgccagt gggccgttga ttgccaccac cagctgataa gcctgctcaa actggctgtg
     3121 cgcggtttgc gccatgctca ttttctgctc aagagagagc attttttcag tcgcttccag
     3181 ctctttcgcc tggaaggttt ccagccattc ggcggcgctg tcggcggtta agtccggcag
     3241 atggcacagt tctttggcac gattaagcgc agcaatcgcc tggttatact ggatcgcgcg
     3301 cgtttgctgg acgtccagcg cctgctggta gtcagcaagc tggcttttca gctcgtccac
     3361 ttccagttcg gcagcttccg cgcgagcctc gttctcttcc tggcgttcga tggcttctgc
     3421 caccacttcg ttttgctctt ccagacggat ctgcagctca tcgagatccg cttcgtagcg
     3481 ttcgatcttc tcctgctgac gcagtgcggt ttgcaccagg ttcaggtgat cgctggccgc
     3541 ctgataatcc gcttccagat cgccttcggc accgttgtgc tctgccagct cacgcgccat
     3601 atcgacgtgt ttgtactgct cagccgccag ttgctgacgc gaagtatgta actcgcgacg
     3661 aaactccagg gctttgtcga gatggacacg gcgctcgttg gcgtgacgca tgtagtccgc
     3721 cgccacgtag ttggtagctt cgctgatcag atgcttaaac aggtcacggt ccgactgggt
     3781 gacacgaatc gcttccagcg tcatgcggtt ttcacgcagc gccgcttcca tgtcctggaa
     3841 cgctttacgc acgccgctgt tttccggcaa cagatagtcg cgcagagaac gggtaatggc
     3901 actggagatc ccgccataca gcgaagcttc gatcagacga tagaatttgc tacggtcaga
     3961 tgcggagcgc agacgacgcg cgatgatgcc cagatcgaac atcagcgagt ggtaatcggt
     4021 aatggagttg aactgtttaa actgcacgcc ttccatcgcc tcgagcttgt ctttcagctc
     4081 gttaagcggc agcacgcgcg cctggcgttc gttcagggtt tcggtcacca gctgtgtcgg
     4141 ctgcaccgac atcggcagtc cctgaatggc aaatggtttg atatccactt tacgatcgcg
     4201 tccggcaacc tgttgcagac gcacaccgac caccacgcgc tggtggcgcg agttaatggt
     4261 gtcgagcatc gaataacaga cacccgcttt cagcttaccg tgcagacctt tatcgcgcga
     4321 accgctggtg gccccggctt ccgtagtgtt acggaaatgc agcagggtca ggtcggggat
     4381 cagcgccgta acgaacgccg ccatggtggt ggatttaccc gccccgttac cgccagaaag
     4441 cgtcgtgacc agctcgtcaa ggtcaaaagt tcgggcaaaa aagccgttcc agttaatcag
     4501 cgtcagtgag cgaaatttac cgcgttcaat cattattctt cctctccgct atctggctga
     4561 ttctcttcgg tttcatcgtt gagttgcaga tgattttcaa tcggcattgc ttcgccatca
     4621 cgaatcaggc gacgctgtgc ttcacgggga tcgtcgccag cacgcacatc ggctccgaag
     4681 cggaacaccg attcggtaat gcgaaacttg ctgctgtcgt ggcccataaa ccacaccatg
     4741 cctaaacgac gcagacggtt gagcgaagaa cgtactttct cctgcaactt ctgacggtca
     4801 acgtctgaac cggttgaacg gttgttcacc agtttcagca gttttgcttc atcggccagg
     4861 gtgagcagtt cgtcgtacag ttcctgctgg gtgaaaatcc cctcattcgc cagccgttcc
     4921 gggctgagat agagataaca gaggattttc ccgaccatca tatccagttc cgacaagacg
     4981 gaacgcggga taagagtggt ggaacgtggg cgtaaataga agaacccttc cggtgcgcga
     5041 ataagctcaa cgttataacg cgcgtaaaac tcttccagat attcctgaaa atccatcagg
     5101 aatgcatgat tatccagttc gtcgaggcca atatggcggc ctgaacgtaa ggcgctgtcc
     5161 agcgccggaa ataacggatt cgccagcgcc tgcgccagct taaccggcat cacttgttca
     5221 atatttgtcg atgacatgcg cctgtacctt ggctccgtaa tcattaatcg gctgccattt
     5281 cgctggcagt ccggtgaaat ctgcttgcgc tacgccaaga cgtaccgcct gatcaataac
     5341 aatacgcgca acgtcaaagt gacgtgcacg cggatactgt gacagatatt cgcgtaccac
     5401 cagaccaaga tccagcggca cttgtctggt tttgtacacg gcaagttgtt cttcgatgat
     5461 cgccgccagc tgttcgcgga tctcgttaaa ctcttcgtat tccagatcct caggaagttc
     5521 cccagtcact tcttcatcgc gcagtgccat ctcttcgtca cgcatatcca gcagacgatc
     5581 ggcattggca taagttagcg cccacggctc atcaaaatag gtttgtaccg actgacgtaa
     5641 ccgctgagca aagacgcggt ttttatccat atcgatcgcg gtacgaataa atttgtgtac
     5701 gtggcggtcg tagccaatcc acaagtcgat ggattgctgg ccccaactga taatacgatc
     5761 gagtttgctc tgcagatcga acaccagacg atcgacgaaa tgcagatcgt catgggtcat
     5821 cgtcgcatcc tgaatgcgca acagattagc ctgcaatttg tcgcctgccg cttccagcgt
     5881 atcctgcaat tcacgcagcg ttccggaagt ttccgaaagc aacaattcac agctggaaat
     5941 cgccgcccgc cagtctttgt tcagcaactg ggcgatatcg tccttcacct gctgctgctg
     6001 ttcgtccatc agacgttgcg tcaggtcgat actgtcgaaa atttctgcta ccgaatattt
     6061 cagtggcgca tagacattac ggtgccagtg aaattcatca ccgccctctt cggcggcatc
     6121 tgctgcgcgt ttgagctcac ccgccacaat cgacaactgc atagaaagac gcagcgtaga
     6181 aaactcgcgc tgacggatgt agtagtcagt aatgccgatg ccgagcggcg tcagacggta
     6241 aattgcgttc ccttccgcct gctcgctggt aaagcggttc agcagacgtt gacgcaccat
     6301 gtcgttgatc gcgttattgg cgcgcacgcc gatggtttcg ctggtttgct caaacgcatc
     6361 actcacatgg cggaatgcat ccaccagctc gccttcactc atctcaccat ccagacgctc
     6421 gccgttcagc gtggcaaccg ccagcagaaa agagagtcgg tctacctgca gcgagatgga
     6481 gaagtcattt tttctggccc aggcaaccag ttcggggact gtctgggaaa attcactcat
     6541 actttatcct tgctctgcgg tttgcgcgcg gtgacatgaa tataacgccc cagggtaata
     6601 tacggttcct gacggcaata acgcgtttct aattcaagta atgcttcata gcagtcgcgc
     6661 tgctggtgct tctcgcgcag ataatcatga aacacgcgaa cgcctgtctt acccataatt
     6721 tgccaaccag cttcttccag ccacagataa acctgcgccg ggtcgcgtgg ataatctggc
     6781 gaaagcgtcc gttttttctt tttcggcatt cccgcctgca cgtaatcaaa attcccggcg
     6841 accatgttat gcatcaacaa accatgcgca ttgtagaaca ttaacgacaa cacgccgcct
     6901 ggacgcaaca ctgaccacag ggtctgcaat acactgcggg gatcggccac ccactcgagc
     6961 accgcatgga acaatatcag atcaacgggc gtttccaaat gcgaagcaac atcctgagcg
     7021 gcgcaatgta taaattgcat gttgtcgctc acaccttttg cttctgccgc ctgttttgcg
     7081 cggtcgatca tctgcgcaga aagatcgcat aaaatgacct gatgcccacg ctcggccatt
     7141 ttgattgcgg tctgcccttc tccaccgcca gcatccagca cacgcagttt ttgcgggccc
     7201 atttccgcca gcacgcgatc gagatcctgc cacagaatag cctgtcgaag ctgccctttg
     7261 gtggtgccgt aaatgttacg ggaaaacttt tccgcaatat catcaaaatt gcgatcctgc
     7321 attgctttct ccaccggttg gctaagacgt tttctgataa agacgctatt ttgtcacagc
     7381 cacggcgaga atgaacccgt ctggtgtaat atcgctggcg atcccttgct atatggttaa
     7441 aaaaggaacc agaaaggatg ctttttacac tgaaaaaagt gattggcaat atgttgctgc
     7501 cacttccgct gatgttgtta attattggcg ctggcctggc gctgctgtgg tttagccgtt
     7561 ttcaaaaaac cgcgaagatt tttattagca ttgggtggct ggcactcttg ttattgagtt
     7621 tgcaaccggt agccgaccgc ctgctgcgtc ccatcgaaag cacctatccg acatggaata
     7681 attcgcaaaa agtggactat atcgtggtgc tcggaggtgg ttatacctgg aacccgcagt
     7741 gggcaccgag ctctaattta atcaataaca gtctgccacg cctgaatgaa ggtattcgct
     7801 tatggcgcga aaatccggga tcaaaactga tcttcacggg aggcgtagca aaaaccaata
     7861 cggtgagtac agcggaagta ggtgccagag ttgcgcaatc gctgggcgtg ccgcgcgagc
     7921 aaattatcac cctggatttg ccaaaagata ccgaagaaga agctgcggca gtgaaacagg
     7981 cgattggtga cgcccctttc ctgctggtga cctccgcatc acatctgccg cgggcgatga
     8041 tcttttttca gcaggaaggg ttaaatcctc taccagcccc ggcgaatcag ttggccatcg
     8101 actcgccgct taatccgtgg gaacgggcaa tcccttctcc ggtctggctg atgcatagcg
     8161 atcgtgttgg ctatgaaacg cttggccgca tctggcagtg gctgaaaggt ccgtcaggcg
     8221 agccacggca agagtgattt tgatgccaga tcgaagttgc gccgactaaa tcgtccggta
     8281 ttaaccagtt gcgcaacttc atcccataac acatacaacc aacgccgcca gatgaacgac
     8341 tccgccactg gcgcgcgttg caggtaactc cagagcaaat cttccgccag agaattatcc
     8401 attagtcgga acagttcgta ttctcgcggt gcccaaagca ttagtcccgg cccgaccatc
     8461 gccagtaact gatcgctgcg cgaatctttc agcatgctgc gtaaacagaa gttaccgtga
     8521 atcaacacac aattgtcgtt aaagccttca aataatgccg ggagacattc gcgagtgcga
     8581 aacaggatcc gcttatcctg catcgtcaga ccggtgttat tgaactgatt gagcgtggtc
     8641 catagcactt caacatgttg ccggtaccat gagggccaga aatgttcctg agtattgtcg
     8701 accgcgccga cgcaaccgcg actgtcctga cggtgccagg ccagtaaggc ttcaacgatt
     8761 tggtctttga gctgttccca gcgttctggt gttcgggctg gtgcctccac cgaaacacca
     8821 cgcatccgct ccagtagcag gacatcaggg ccggggtgtt cttcatgcgt catcacacca
     8881 taaatagtcg gcatacggac agtcccactt cttgccagca tggtggtttt ccatgccagt
     8941 tgtcgggctt ttccgggcgt actaaagctt cttgccatta acggcattgg gtttccctgg
     9001 ctgtcataca aagcccacaa cgccgtatcc gctttttcat tgacgcactc aatacgactg
     9061 agtttttcgc ccagtaaatg gcttaattcg gcacgcagct gttccattca gattaccctc
     9121 ataaaagcta ctgctttcat aatgagcgcc aatataaaag atgtcacctg aatgagatca
     9181 attgttgaaa agaaaaattg aggaaaatcg taacggtacg acactcctcc caaaattggc
     9241 tgaagtgtcg tgaagtgaaa ttagcgcatt tcagcgcgaa cgcgctcaag atcttcaggg
     9301 gtatccacac ctgtgccagg aacttcctga gcaacagcaa catggatttt ttcaccgtac
     9361 cacagaacac gaagctgctc taacatttcg atgtgttcta acggacttgc ctgccagttg
     9421 acgtaacgac ggataaagcc tgcacggtag ccataaatgc caagatgacg caggaagtta
     9481 tcgccaacgg tttcaaggcc ttctgcaaaa cgatcacgat cccaaggaat ggtggcgcgt
     9541 gagaagtaca gtgcataccc ttcagcgtcg agaaccactt tcaccgcatt cgggttaaac
     9601 gcttcttccg cattgtggat tggcaccgcc agagtcgcca tacccacctg acgctgagcg
     9661 aggttatcag caacctgacg aatgattgtc gcagggatca tcggttcatc accctgcaca
     9721 ttaacgatca ccgtgtcgtc gctgaatgcg catttttcga caacttccgc cagacgttct
     9781 gttcctgact gatgatcggc gcgcgtcata catacttcac cgccagcggc ttcaacggcg
     9841 cgggcaacat cctcatgatc ggttgccacg atgatgcgct cggcacctga ttcacgcgcg
     9901 cgttcaagaa catgaacaat catgggtttg ccgttaatat caaccaatgg tttaccgggc
     9961 agacgcgtgg acgcgtagcg cgcgggaata atgaccacaa aactcatgat ttactctcat
    10021 cagcagtcag cacgcgggct tccgtttcca gcaacactgg aatgccatcg cggagcggga
    10081 aagccaggtt atccagtttg caaataagct cttgtttttc ctggttatac caaagttttc
    10141 cgttgcaaac cgggcaggca atgatttcaa gcaaacgatg atccatagtt cctccagatg
    10201 gatcgggtta tgaatgcata aatcttatca taatcattta tgcgacgggg tctatttccc
    10261 agccagtgcg gcaatcagta aagagacctt gcgggcagcg tcctaatgtc acccgcgttg
    10321 cctgctgcca gctcgcgaaa tcagtaatcg cctgacgtaa ccctttttgc agcattgtcg
    10381 ttggtttaat gccttcctgt aaccacagag agataacttc aaggatgcct gtctggcgat
    10441 gcattttggc atccattcgc ccaactaatt gcccacgatg taataatggc agaacaaaat
    10501 agccatactg gcgtttcggc gctggggtat agcactccag ccggtagcta aaatcaaaaa
    10561 gctgctctgc gcgtttgcga tcccagacaa caggatcaaa aggcgaaagt accgcgctgt
    10621 gcgttgcagt gagctttccg gccagcgcac gctcgagtag cggcagcaaa tcagcatgca
    10681 gccaaagatt gcccaatttt tcaacatgca cagcaatgat ttgctgctgt tcagccctcg
    10741 cttcgcgcca cgccgccagt gccggacgtt tcagccgata gtaatctgcc agccactgtt
    10801 cgcggaatat tcccaggcta cgcgcactgt tatccagcat gatgatttct gcttctgttt
    10861 gcgaaacgag atcgcgctca tcatcccagt caggcatgac acggtgggtt aaatcataaa
    10921 cgcgctggaa gttgcgccgt tcaatcacca tcacctttcc ggcagtaaat aaaccttcca
    10981 gatgccgttt atgcggtttc cattcccacc agccgcttgc acctttacga ggatgctcaa
    11041 aatcggctga acgtaccggc cccttatcat gaatatgctg aattaactgt gcaatttccg
    11101 cctcatgttc ctgcatccag gcgtctttgt atttccagcc cattttttca agtgccagca
    11161 tgcggtggcg aataagacga aagtcgctac gcggcataaa gcaggcttca tgcgcccagt
    11221 attccattaa ttcgccacgc gccagagact catccagcca ctgggcagga taatttccca
    11281 gacgactgaa aagcaccaga tatggactac gggcaacaat attgatggta tcgatttgca
    11341 gcaaggacat gcgggagatc gttgccggaa tatcctccaa cgacgctcga cggcggggtt
    11401 tgtttaacag gccttgtgcg gcaaggtgaa gattacgcgc atcagcaagg gagaggtgcg
    11461 gcagcgacat tcatgactcc atcaatcgaa cgctgccgcg gcgtaactag ttgccagaag
    11521 ccagcgaggt tagttgcgta agcagtttcg ctggttcatc acctgaaagc tgtgcgtcta
    11581 caggcaaata ccaccaattt tcttctgcaa aggcccggca tttcaccgca tctttttcag
    11641 tcattaccag cgtttgcccg gcgcttacca acgcactgac atccgcatgg ttcaaagact
    11701 gatgatcggc cagcggtaca catttttccg gttgtacgcc acacatcttc agcgtggcaa
    11761 aaaagcgcgg cggatgccca atccccgcca tcgccactac atgttcaagc tgagcaacgt
    11821 cacaacgcgt accggtacgt aaattcaccg cctgacccgg cagcagatgc atgggaattt
    11881 caccgctacg agggacacca ccgttgacga ttaccgcatc aaccgacttt aagcgccccg
    11941 ctcgctcacg cattggcccc gccggcaacc accagccatt gccaaagcga cgcacaccat
    12001 caataacgac aatttccaca tcacgcgcca gacggtaatg ctgtaaaccg tcgtcggtta
    12061 cgatgatctg cacatcaggg tgttgcgcca gaatggcttt taccgcatca gaacgaacgg
    12121 gagaaaccgc aacaggcgca tcagtgcgtt gataaatcaa cacaggttca tcacccgcct
    12181 gtgctgttgt ggtatctgcc gacaataaca gcggataaga ttcagcctta ctaccatatc
    12241 cccgcgatac gacccccacg cgaataccgc gctgttgcaa ctgttccacc agccagacaa
    12301 cgaccggggt ttttccgttg ccgcctgcgg tgagattacc aaccacgaca accggtacgg
    12361 gggcacgcca ggcgcgcttc agttttagtt tatagcaaag acggatcgcg ccactcacca
    12421 ggccatacaa ccaggagagt ggcagcaata gccgccacaa aggggattca ccagaccaga
    12481 ttttttcgat cattggccaa actgcatttt gtgaagttgc gcgtaaacgc cgcggtgctc
    12541 aagcaaatcg ttatgcgtac cgcgttccac aatgacacca tcctcgacga ccacgatttc
    12601 gtctgccttt tcaatggtag acaagcggtg ggcaatcacc agagaggtac ggtttttctg
    12661 caactcatcc agtgccgcct gaatcgcacg ttcggattcg gtatccagag ccgaggtagc
    12721 ttcatccaga atcagaatcg ggctatcacg cagcaaggct cgagcgatag caatacgctg
    12781 acgctgaccg ccagagagca gcacgccgtt ttcaccaatc actgtatcga gaccgttatc
    12841 catcttattg atgaagtcca tggcgtaggc catacgcgcc gcttcttcaa tttgctcacg
    12901 gctgtactgt tcagtccgtg cgtaagcaat gttgttagca accgtatcgt taaacagatg
    12961 gacattctgc gacaccagag caacctggtt acgtaacgac gccagggtat actcgcgcag
    13021 atcgtgacca tccatcagga tttcgccttc atcaatatcg taaaaacgag tgatcaggct
    13081 ggcgatggtt gatttacctg aaccagagcg tccaaccaga gcaaccgtct tccctgccgg
    13141 aattttcagg ttgatgttac gcaatgcagg tacgtcacgt cccggataag taaaggtgac
    13201 attgcggaat tccacgtcgc cagtcgcacg ctcgatcacg cgcttacctt cgtctttctc
    13261 ctgctcactg tccagaatgg taaacagcgt ctgacaagcc gccataccgc gctggaactg
    13321 ggcgttaacg ttggtcagtg atttcagcgg acgcatcagt gcaatcattg aagagaaaac
    13381 aacggtaatc gtaccagcag tcaggctatc catgacactt gggaagctcg ccgcatacag
    13441 aacaaacgcc agcgccaaag aggcgatcag ctgaatgatc ggatcagaga tggaagaggc
    13501 tgaaaccatt ttcatcccct gaagacgcat tcggttgctg actttatcaa agcgtttcgt
    13561 ttccacttcc tgaccaccga aaatcaatac ttctttgtgg cccttcagca tttgttcggc
    13621 gctggtggtc acctgcccca tggtgttctg catgttttta ctgatgttgc gaaaacgctt
    13681 cgatactacg cgaatcgcaa tcgaaacaat cggtgccagc acaatcaaaa tgatcgacag
    13741 ttgccaactg taatagaaca tcatgatgaa caggccgatg attgacgcac cttcacgcac
    13801 aaccgttatc agtgcgccgg aagaagaaga agcaacctgt tcggaatcgt aggtaatacg
    13861 tgacaacagc gtccccgttg actgtttgtc aaaaaatgaa accggcattc ccatcatgtg
    13921 accaaacagg cggcgacgca tggtcattac cacctttcct gatacccagg agatacagta
    13981 gctggagaca tagctggtga taccacgtaa aatcatcagc ccgatcacca ccagcggcat
    14041 ccacaccagc acggagcgat ctgttttacc aaagccatca tcaagaagtg gcttaaggag
    14101 cgataacatg aaggtatcgc tggctgcgtt gaggattaac gctacgcccg ccacgatcag
    14161 acccgcttta aaaggcgcaa tggttggcca cagtcggcgg aacgtctgcc acgtagagag
    14221 atctttgtcg ttatgcattc aaaaaaccag catttgttga aatagccgca tattctaccc
    14281 gttatccact ggcacgccaa accactgatg ataccaacga ggtaaaattt gctctctgag
    14341 gctgctaatc cgccagcctt gcgctgaaaa attgaccgtc acttgaccct gatgtggagt
    14401 atcaagccat tgatatcctt gctgttgata gcgatgctta actttattag agggcaatcg
    14461 ccatgcgtta tagcgttata gcgcgatgcc gatgcgagtg ccacttttcc attcactcgc
    14521 tgaattaatg gcaacgatga tgaggtatta ctgccatggt gaggtacctg aagcaatgtt
    14581 gtctgcactt gctgccagta acggcttagc atcttttgtt cagcggggac ttcaatatca
    14641 ccggttagaa gaatgctatt cgtcccgtca taaaccttaa ccacacagga atggttattt
    14701 cctttatcgt tgctagcttg taaaggccag tgcacgctga aacgcaatcc ttgccattgc
    14761 cacgcttcgc cacgcacaca gggctgatga tgttcccagt ttaacggact tctgatccat
    14821 aacatcggcc atgtgtgcaa tattgagtcc agccctcccc ggtgatccag atgttcatga
    14881 ctcagaataa cgccttccgg ttcaagatta tgccagtgga gccaggggat aatcagttgt
    14941 tgcccactat ccccttcggg ccaggccagt cctgtgtcat agagaatcgc tttgccgttt
    15001 ctggctatca ccattgccag cccttgcccg acatcaagca tgtacacctg ccactcgtca
    15061 ggtcgaggtt tttgccacag cggccagcac atcagcaagc ctacagccac acacattgct
    15121 ggcaacgttc gccaggcgtt taatcgccat accaccagta agaaccatgg ggaaaatgat
    15181 agccattgcc aacgttcagc aatgttgatc cacccttctg gcaaactctt taacccccag
    15241 aaaagtaaag ccaaagaccg gtcggcaaga aaccataacc cttgctccag gattaacggc
    15301 ccgcttaaat gcacaaccat cgcggcgagg atcaacggaa ccgtgataaa tgtcaccaag
    15361 ggaattgcta atagatttgc aataaacgag gtcagactaa tgccatgaaa tatgacgatt
    15421 tgcacaggca taagcaggag tgtgattccc agttgcaaat gaatgaggga aacaactgca
    15481 cgcaataccg gcggcagttg ccactcagga cagggaaacc actggtacca aaaaatcagt
    15541 gccgcgaccg cagcggcaga gagccataaa ctttgcgaga gaatggcaac aggatccatc
    15601 agcaaaattg ccgccagaca acatatccat acatcccagc cactccactg tcgcccactt
    15661 aacttaagca ttccccacgt agcaagcgcc accacggtac gcaatgcagg aggttgcatt
    15721 cccgtcaacc aggcataaaa agcagcacag cagattccac caattaatgg catttgccag
    15781 tggatccagc gcccaggcag aaaaacttgc ccaccgcgaa tgagtccggc agccagcaac
    15841 gccgcaaaag cgatgtgcaa tcccgatatc gccattaaat gcgccgttcc agtatcacgc
    15901 atgatatttt tgatttcttt ggggacggat aaccgttccc ccatacctaa accaagaata
    15961 accgcattcc acatataggg ttgcagcgtt gtttgtagtg acgccagata ctgtgcacgc
    16021 aggctacaat tcggttcaat gacacttgcc tgcagaaagc ggccgatgag cggctgatgc
    16081 tgggcaatgg cataacgctg gctatcaaag ccgccatcat taagttggcc atgaactgca
    16141 cgaactttga gtttcattga ccattgttgt ccagcacaaa ccgcttgcgg aagatattcg
    16201 ccatacagca caagacctgg cgcagggaat atacgtcgac cttgtagatg agtaatttga
    16261 ccgtaatgag tggtcatgcc gtcagttgca gtgatctcaa caattgcatc ctgcgtcgcg
    16321 ccagttaagg tttctcctgc ccacaaaatt tgctttgctg ataatatgcc ccaaacgaaa
    16381 aacagcaacg tcagcgcgat ataacggacg gttttaacag ggataaatgc cagtacgcag
    16441 gcgaagagag tcagaaacgc aagggttaat gtcccaggca attggggcaa aatcagcaac
    16501 ggaaaaattc cgcaaattat gcatacgccg actgtcgtta ttttcatgca cccctccctg
    16561 tttatggaaa gtgtgcaact ttgttgagcg gttgtctggt gggaattttg cgttccccga
    16621 ggcacattca gaagaattta acgaaagggt gaaaactgct caaaactctg cgaggcagct
    16681 tccagttcct gattagagaa atgaaaaaag cacccgacag gtgcttttct cgcgttcaag
    16741 tttgagtaaa aacttaaccg taaatattgg cgcgatcgcg cagttcttta ccaggtttaa
    16801 agtgaggaac gtattttcct tccagttcta ctttatcgcc agtcttcgga ttacgtccgg
    16861 tacgtggtgc gcggtagtgc aaagagaaac tgccgaaacc gcggatttca atacgctcgc
    16921 cctgcgcaag agtcgaggcc atatgctcca gcatctcttt tactgcatct tcaaccgtct
    16981 tggcgggaat gtgcgattgc tgggtggcaa gtctttctat caattctgac ttggtcatga
    17041 ttcctccggt tccttaaagg caaattaagc ggctgctgtt gctgcattga ttaagggcgg
    17101 ccgtagccgc ccttagtgct tgattacagg acgaaacctg caatctgtca agtaaactca
    17161 acaaacttcg gaataaaaat cccgaagagt cagagaatta ctcgccttta gctgctttga
    17221 aagcttcagc cattgcgttg ttggagaagt ttgcatcttc ctgtttgtta acagttgcga
    17281 ttgcatcttt ctcgtcagct tcgtctttcg cacgaacaga caggctgatt gcgcggtttt
    17341 tacgatcaac gccggtgaat ttagcttcaa cttcgtcgcc aacgctcaga accagggtag
    17401 cgtcttcaac gcggtcacgg gatgcttcag aagcacgcag gtaaccttca acgccgtcag
    17461 ccagttctac ggttgcgcct ttagcgtcaa ctgcagttac tttaccggtt acgatagcgc
    17521 ctttcttgtt cagagcaacc cagttgttga acggatcttc tgcgagctgt ttaacgccca
    17581 aggagatacg ttcacgttct gcgtcaacct gcagaacaac tgcagcgatt tcgtcgcctt
    17641 ttttgtattc acgaactgct tcttcgcctg caacgttcca ggagatgtca gacaggtgaa
    17701 ccaggccgtc gatgccgccg tctaggccga tgaagatacc gaagtcagtg atagacttga
    17761 ttttaccttc aacacggtcg cccttgttgt gggtttccgc gaactgctgc cacgggttag
    17821 ctttgcactg tttcagaccc agggagatac gacgacgttc ttcgtcgata tccagaacca
    17881 taacttccac tacatcgcca acgttaacaa ctttggacgg gtggatgttt ttgttggtcc
    17941 aatccatttc ggaaacgtgt accaggcctt caacgccttc ttcgatttca acgaagcagc
    18001 cgtagtcggt caggttggtc acgcgaccag tcagtttggt accttccgga taacgtttag
    18061 cgatagctac ccacggatct tcgcccaact gtttcaggcc cagggataca cgggtacgtt
    18121 cgcggtcgaa cttcagcact ttaacagtga tttcgtcgcc cacgttgacg atttcgctcg
    18181 gatgcttaac gcgtttccag gccatgtcag tgatgtgcag caggccgtca acgccgccca
    18241 gatcaacgaa tgcaccgtag tcagtgaggt tcttaacgat acctttaact tccatgcctt
    18301 cctgcaggtt ttccagcagc tgatcgcgct ctgcgctgtt ttcggattcg ataacggcac
    18361 gacgagaaac aacaacgttg ttgcgcttct gatccagctt gattacttta aattcaagct
    18421 ctttgccttc caggtgcaga gtgtcacgca ccggacgaac gtctaccaga gaacctggca
    18481 ggaacgcacg aataccgttc agctcaacag tgaagccgcc cttaactttg ccgttgataa
    18541 caccggtaac agtttcagca tcttcgtaag ctttttccag cgtgatccag gcttcgtgac
    18601 gtttagcttt ctcacgggac agcagagttt caccgaagcc gtcttctact gcgtccagag
    18661 caacgtcaac ttcgtcacct acctggattt ccagctcgcc ctgggcgttt ttgaactgct
    18721 cagccgggat ggcggactca gatttcagac cagcgtcaac cagtactacg tctttgtcga
    18781 tagcaacaac aacgccacga acgatagaac ccgggcgggt ttcgatttct tttaaggact
    18841 cttcaaagag ttgagcaaaa gattcagtca tgtttaatct tcaggtttat atttaacgtc
    18901 cacctggctc catgccggat ggggttgttt aacatacccg ctgtcattcc attgcaacgg
    18961 gggtactgca aattcggtcg cttatgcgag agccaatttc tggcgcgcgt attgtagcgc
    19021 tttttcaatc acttgctcaa tgcttaaggt ggtggaatcc aacactaaag catcggctgc
    19081 cggaaccagt ggcgctaccg ctcggttacg atcgcggtcg tcgcgttctt tgatctcggc
    19141 caaaaggcgc tcaaagttaa cactaaagcc cttctcctgc aactgtagca tgcggcgatg
    19201 cgcacgttct tccgaggagg cgtcaaggaa aattttcact ggtgcatcag ggaataccac
    19261 cgttcccatg tcgcggccat cggcaatcag acctggtaat tcgcgaaacg cgcgttggcg
    19321 acgcaataat gcttcacgaa cgcgtgggaa tgtcgcgact tgtgaagccg cattcgccac
    19381 ttcctgagta cgaatttcgc cgctgacatc ttccccttcg aggatcactt ccagattgcc
    19441 attggttgac acaaaacgta catccagatg ggatgccagc ggtaccagcg catcttctga
    19501 cgcaacatca acatggtgat gtaatgccgc caatgccagt acgcgataaa ttgcacccga
    19561 atccagcaga tgccattgca atgcttccgc catagcctta cacaaggtgc ctttccctgc
    19621 accgcttggg ccatcaatgg taataaccgg ggcaattgcc gtcatcttta tctccttaaa
    19681 acaggcgtac cgttaacata accgcgcgca ttatacgcgc cgacgccaca aatcgttaac
    19741 gttgtgtgca aaaaccagtt ttgtctgtat tcagatgggg atttattgcg caattatagc
    19801 gggctggcag aagaccagcc cgaaagatga caatgattta cttaccagag gcgatacgat
    19861 cacggatgtg ttgcgcacgc tctgttgatg gtgggtgaga gtcaaacatg gactgggtgc
    19921 gaccgccatc cagactagcc agtttttcaa agctgccaac cagcccctag gtgctgatgc
    19981 cacgtttctt caacagatca aaggagaaat catctgcttc ggactcttta tcacgggagt
    20041 atttagcatt aatagcgcct tctgcgatat cacccaattg tgagcgggaa agctgggaag
    20101 ccacaccgct ggtagctgaa atggcatcgc gtgcggcaac gatcgcataa gaaactttca
    20161 tttcagccag cgagtgaccc aacgcgacgt ggcccagttc atggcccaga acaccttcaa
    20221 tttcgttgtc attcatcatg tccatcaggc cactgtagac acggacacag ccgttcgcca
    20281 tcgcccatgc gttgacgtcg ctggtcatat aaacctatag ttgaccggcg tgccattaat
    20341 attgttaccc aatgctttgg cgatttttgc cagacgttta ccgtacttgc tggatttact
    20401 tgcgacttga ttgccgctgt ccatttcggc acagccctga ttggcaatcg cttttgcatc
    20461 ggcatcgctt aatgttgctg ctttataggc atttaaaccg gagctgatag ccatattggt
    20521 atcaataccg tgggtatttt gacaccctgt cagtaatgct gcagaggtcg caatcgccag
    20581 cagtaattta gtattcttca tgtgaatcat ccgttgatta atcatatata aacattatgt
    20641 atcaacaact tacattgaca agcgacgcta ccattaatca aaatgactca caaggtccga
    20701 aaaaaaacgc cgacaatgtg
//
LOCUS       DADMIB010000064        20698 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.064, whole genome shotgun sequence.
ACCESSION   DADMIB010000064 DADMIB010000000
VERSION     DADMIB010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20698
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.064"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..224)
                     /gene="hyfA"
                     /locus_tag="JNZ89_002191"
     CDS             complement(<1..224)
                     /gene="hyfA"
                     /locus_tag="JNZ89_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HAY8936066.1"
                     /translation="MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTST
                     ITAPVVCHHCEEAPCLQVCPVNAISQRDDA"
     gene            complement(477..947)
                     /gene="bcp"
                     /locus_tag="JNZ89_002192"
     CDS             complement(477..947)
                     /gene="bcp"
                     /locus_tag="JNZ89_002192"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HAY8936067.1"
                     /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
                     GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ
                     FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA"
     gene            complement(947..1519)
                     /locus_tag="JNZ89_002193"
     CDS             complement(947..1519)
                     /locus_tag="JNZ89_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     repressor"
                     /protein_id="HAY8936068.1"
                     /translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
                     GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV
                     ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ
                     AFKALCTELNAQGSINVVNYSQHDEQDGVK"
     gene            1665..2543
                     /gene="dapA"
                     /locus_tag="JNZ89_002194"
     CDS             1665..2543
                     /gene="dapA"
                     /locus_tag="JNZ89_002194"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HAY8936069.1"
                     /translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT
                     TGESATLNHDEHADVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
                     VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
                     KEATGNLTRVNQLKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC
                     KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD
                     SGRETVRAALKHAGLL"
     gene            2560..3594
                     /gene="bamC"
                     /locus_tag="JNZ89_002195"
     CDS             2560..3594
                     /gene="bamC"
                     /locus_tag="JNZ89_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708316.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HAY8936070.1"
                     /translation="MAYSVQKSRQAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEA
                     APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGVRTQFTGD
                     TASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRGR
                     YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAAN
                     AAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM
                     AVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
                     VAVFQAAFSK"
     gene            3807..4520
                     /gene="purC"
                     /locus_tag="JNZ89_002196"
     CDS             3807..4520
                     /gene="purC"
                     /locus_tag="JNZ89_002196"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HAY8936071.1"
                     /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
                     RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV
                     KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND
                     VLKKRFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL
                     GGLIEAYEAVARRLGVQLD"
     gene            4688..5551
                     /locus_tag="JNZ89_002197"
     CDS             4688..5551
                     /locus_tag="JNZ89_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HAY8936072.1"
                     /translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV
                     LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMG
                     KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
                     QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQ
                     QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD
                     PAQCNTFGKSI"
     gene            5566..7581
                     /locus_tag="JNZ89_002198"
     CDS             5566..7581
                     /locus_tag="JNZ89_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HAY8936073.1"
                     /translation="MAELTALYTLTAQMKREGIRRLLVLSGEEGWCFDHALKLRDALL
                     GDWLWISPQPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL
                     VLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNDAILWRQNQPFSL
                     AHFTPRTDWHPATGAPQPEQQQLLQQLLTMPPGVAAVTAARGRGKSALAGQLISRIAG
                     SAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV
                     SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL
                     VFDDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLLSGAHYRTSPLDLRRMMDAP
                     GQYFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGSNPLA
                     ATLRGRRVSRIAVHPARQREGVGQQLIASALQYTQDLDYLSVSFGYTGELWRFWQRCG
                     FVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYRLRRDAQALAQWNGETLPVD
                     PLNDIVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQ
                     LCTTLKLAGRKMLLVRQREEAAHALFALNDVRTERLRDRITQWQFFH"
     gene            7655..8353
                     /gene="ypfH"
                     /locus_tag="JNZ89_002199"
     CDS             7655..8353
                     /gene="ypfH"
                     /locus_tag="JNZ89_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311362.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY8936074.1"
                     /translation="MKHDHFVVQSPDKPVQQLLLLFLGVGDNSVAMGEIGSWFAPLFP
                     DALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGA
                     NATALIGFSQGAIMALESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDP
                     VIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEAL
                     SGGKPGDDDVIEMM"
     gene            complement(8463..8663)
                     /locus_tag="JNZ89_002200"
     CDS             complement(8463..8663)
                     /locus_tag="JNZ89_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpfN family protein"
                     /protein_id="HAY8936075.1"
                     /translation="MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPP
                     HRDFNDKWDDDDDWPKKDQPKK"
     gene            complement(8691..9818)
                     /gene="dapE"
                     /locus_tag="JNZ89_002201"
     CDS             complement(8691..9818)
                     /gene="dapE"
                     /locus_tag="JNZ89_002201"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HAY8936076.1"
                     /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMD
                     FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG
                     SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV
                     GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
                     WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE
                     KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG
                     AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
     gene            complement(9822..10178)
                     /locus_tag="JNZ89_002202"
     CDS             complement(9822..10178)
                     /locus_tag="JNZ89_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HAY8936077.1"
                     /translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNG
                     FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPSIIKRPLLCAPGKPM
                     LLGFSDSSYQQFFHEV"
     gene            10559..10618
                     /gene="ypfM"
                     /locus_tag="JNZ89_002203"
     CDS             10559..10618
                     /gene="ypfM"
                     /locus_tag="JNZ89_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YpfM"
                     /protein_id="HAY8936078.1"
                     /translation="MIERELGNWKDFIEVMLRK"
     gene            complement(10717..13829)
                     /gene="acrD"
                     /locus_tag="JNZ89_002204"
                     /pseudo
     CDS             complement(10717..13829)
                     /gene="acrD"
                     /locus_tag="JNZ89_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416965.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease AcrD"
     gene            complement(13992..15692)
                     /gene="narQ"
                     /locus_tag="JNZ89_002205"
     CDS             complement(13992..15692)
                     /gene="narQ"
                     /locus_tag="JNZ89_002205"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HAY8936079.1"
                     /translation="MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAIN
                     IAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHL
                     NANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIG
                     IFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQM
                     SSELHKLYLSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRD
                     NEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLN
                     SVSSMLGRGLYFNQAQKHFQHLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIP
                     EDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
                     LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRD
                     NGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
                     "
     gene            15898..17877
                     /gene="aegA"
                     /locus_tag="JNZ89_002206"
                     /pseudo
     CDS             15898..17877
                     /gene="aegA"
                     /locus_tag="JNZ89_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416963.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent uric acid utilization protein
                     AegA"
     gene            17945..18520
                     /gene="nudK"
                     /locus_tag="JNZ89_002207"
     CDS             17945..18520
                     /gene="nudK"
                     /locus_tag="JNZ89_002207"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose pyrophosphatase NudK"
                     /protein_id="HAY8936080.1"
                     /translation="MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR
                     GNGATILLYNAKKKTVVLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAI
                     EETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPF
                     SQALEMIKTGEIRDGKTVLLLNYLQTSHLMD"
     gene            18646..19689
                     /locus_tag="JNZ89_002208"
     CDS             18646..19689
                     /locus_tag="JNZ89_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
                     /protein_id="HAY8936081.1"
                     /translation="MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVAR
                     NTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDK
                     WRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG
                     SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSL
                     DPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQ
                     ETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNW
                     HGPDAWPTLWITR"
     gene            complement(19799..20694)
                     /locus_tag="JNZ89_002209"
                     /pseudo
     CDS             complement(19799..20694)
                     /locus_tag="JNZ89_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300650.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
BASE COUNT         5001 a         5295 c         5539 g         4863 t
ORIGIN      
        1 atcgcatcat ccctctggga gatggcattg accgggcaga cctgcaggca aggggcttcc
       61 tcacagtgat gacacacgac aggggcagtg attgttgacg tcttcgccag ggccaggcgc
      121 gggtgttgct gtaaaccttg cgttttatgc acgtccgaac aggcagcgag acaggtatta
      181 catcctgtac accacagtgg ttcggccacc acaaagcggt tcatgtcggc tccttgaaaa
      241 tgatatgaaa cattgcattt catattgcat aaaggatgcc agtctgatta atttaatata
      301 ttcaataaat tatgtattaa cagggttctg aacggtacaa aaatgatggt cattaacgtt
      361 cagcaaaaaa tggattcgac acccgtgtcg caggggaaag cgagaatgtg atcttgatca
      421 cgagaagtga ggtgtgctga ccgcaagcgc agccagcacg gaatggagca aagtaatcag
      481 gcgtgttctt tcagccagtt cagcacaacg tcgtggtgat tgctggtttt aaaatcgtca
      541 aagacatgtt cgattttgcc atcagcgtca atcaggaagc tgatgcgatg aataccatcg
      601 taggttttgc ccatgaagga cttttcaccc cagacgccga attgttcgca cacctggtgg
      661 tcctcatcag acaggagcgt aaagttaagc agctcttttt ccgcaaaacg ggagagtttt
      721 tcgggtttat cggtgctgat acccagcaca tcaacgcccg cttttttcaa ctcatccatg
      781 ttatcgcgta agccgcaggc ctgtacggta cagccggggg tcatggcttt cgggtagaaa
      841 taaaccagaa cacgctgtcc ctggaagtcg gtcaaattaa cttgttctcc gtcttgatcc
      901 ggcaagctaa atttcggtgc gatatcaccg gctttcagtg gattcattac ttaactccat
      961 cctgttcatc atgttgggaa taattgacga cgttaatact gccttgtgca ttgagttctg
     1021 tacatagggc tttgaacgct tgctcaatat ttgctgcgtc cgcagatgcg gggctgtggg
     1081 cggtgatctg aatatgcaac tgcgcagccc gttcattttc agcaggttgc gtgcgcgaca
     1141 ccagctccgc aatgttcata tgatgcgcgt cgaaaagtgc tgtgaagcgt tcaattaaat
     1201 gcggggagtc tgcaacatcg acctgaaccc agacagatgc tggcattggc ggacgcggac
     1261 gcgccgtcgt gcgcttcatc acgattaaaa gatccagttc ggcacctttc aacggtaacg
     1321 ttgattcaat cagagtaatg gcattccatg aaccggaaag cagcatgata aacgtgaact
     1381 cttctcccag catcgccagg cgactgtctt caatattaca gccgcaacta ctgacatgac
     1441 gggtgatggt gttcacaatt ccagggcgat cggcacccaa cgcagtgatc accagataat
     1501 gttgcgatga cagtgtcaaa ctggttattc ctttaagggg tgagttgttc ttaaggaaag
     1561 cataaaaaaa acatgcatac aacaatcaga acggttctgt ctgcttgctt ttaatgccat
     1621 accaaacgta ccattgagac acttgtttgc acagaggatg gcccatgttc acgggaagta
     1681 ttgtcgcgat tgttactccg atggatgaaa aaggtaatgt ctgtcgggct agcttgaaaa
     1741 aactgattga ttatcatgtc gccagcggta cttcggcgat cgtttctgtt ggcaccactg
     1801 gcgagtccgc taccttaaat catgacgaac atgctgatgt ggtgatgatg acgctggagc
     1861 tggctgacgg gcgcattccg gtgattgccg ggaccggtgc taacgctact gcggaagcca
     1921 ttagcctgac gcagcgcttc aatgacagcg gtatcgtcgg ctgcctgacg gtaacccctt
     1981 actacaatcg tccgtcgcaa gaaggtttgt atcagcattt caaagccatc gctgaacata
     2041 ctgacctgcc gcaaattctg tataatgtgc cgtcccgtac tggctgcgat ctgctcccgg
     2101 aaacggtggg ccgtctggcg aaagtaaaaa atattatcgg aatcaaagag gcaacaggga
     2161 acttaacgcg tgtaaaccag ctcaaagagc tggtttcaga tgattttgtt ctgctgagcg
     2221 gcgatgatgc gagcgcgctg gacttcatgc aattaggcgg tcatggggtt atttctgtta
     2281 cggctaacgt cgcagcgcgt gatatggccc agatgtgcaa actggcagca gaagggcatt
     2341 ttgccgaggc acgcgttatt aatcagcgtc tgatgccatt acacaacaaa ctatttgtcg
     2401 aacccaatcc aatcccggtg aaatgggcat gtaaggaact gggtcttgtg gcgaccgata
     2461 cgctgcgcct gccaatgaca ccaatcaccg acagtggtcg tgagacggtc agagcggcgc
     2521 ttaagcatgc cggtttgctg taaagtttag ggagatttga tggcttactc tgttcaaaag
     2581 tcgcgccagg caaaggttgc gggtgtttcg cttattttat tactcgctgc ctgtagttct
     2641 gactcacgct ataagcgtca ggtcagtggt gatgaagcct acctggaagc ggcaccgctt
     2701 gcggagcttc atgccccggc tggaatgatt ttgccggtga cctccggtga ttatgcaatc
     2761 ccggtgacca acggtagtgg tgctgtcggt aaggcgctgg acattcgtcc accagcccag
     2821 ccgctggcac tggtttctgg cgtgcgtacc cagttcacgg gcgataccgc ttcattgctg
     2881 gtggaaaatg gtcgtggcaa tactctgtgg ccgcaggtgg ttagcgtgct gcaggcgaaa
     2941 aactacacca tcacccaacg tgatgatgct ggtcagacac tgaccatcga ttgggtacaa
     3001 tggaaccgtc tggacgaaga cgagcagtat cgtggtcgtt atcaaatctc tgttaagccg
     3061 cagggttatc agcaggcggt tacggttaaa ctgctgaacc tggaacaggc gggcaaaccg
     3121 gttgcagacg cggcttccat gcagcgttac agcacggaga tgatgaacgt tatttccgcc
     3181 ggtctggata aatctgcctc tgacgccgcg aacgctgcgc aaaatcgtgc ctccaccact
     3241 atggacgtac aaagtgcagc tgatgacacc ggtttaccga tgctggtcgt acgcgggccg
     3301 ttcaatgtgg tttggcaacg tctgccagcg gcgctggaaa aagtgggcat gaaagtgacc
     3361 gacagcaccc gttcgcaggg taacatggcc gtaacttata agccgctgtc tgacagcgac
     3421 tggcaggaac tgggcgcgag cgatccaggc ctggcatccg gtgactataa actgcaggtt
     3481 ggcgatttag ataaccgcag cagcctacag ttcatcgatc cgaaaggtca tactctgact
     3541 cagagtcaga acgacgcgct ggtagctgtc ttccaggctg cgtttagcaa gtaaaaatac
     3601 agggctggag tcatccggcc cttttttctg atatgatacg caaacgtgtg cgtcggcaga
     3661 aaaatgcaat tttagcggta attcgcacga aatttgtttg tcggacgtag gtcggataag
     3721 gcgttcttgc cgcatccgac aaaacatccg gcacaccaga cagcaaaaga ttttaaaacg
     3781 ttaattcaca cccaggagtg ataaagatgc aaaagcaagc tgagttgtat cgtggtaaag
     3841 cgaaaaccgt atacagcacg gaaaacccgg acctgttggt gctcgaattc cgcaatgata
     3901 cgtcagcagg ggatggcgcg cgcattgagc agtttgatcg caaaggtatg gtgaacaaca
     3961 agttcaacta cttcattatg agcaaactgg ctgaagcggg tatcccgact caaatggagc
     4021 gtctgctctc cgataccgaa tgtctggtga aaaagctgga tatggtgccg gttgagtgtg
     4081 tcgtgcgtaa ccgtgctgct ggctctctgg tgaaacgtct tggaatcgaa gaaggtattg
     4141 agctgaaccc gccgctgttc gatctgttcc tgaaaaacga tgccatgcac gatccgatgg
     4201 tcaacgaatc ttactgcgaa acctttggct gggtgagcaa agagaacctg gcgcgtatga
     4261 aagagctgac ctacaaagcg aacgacgtgc tgaaaaaacg gttcgatgat gctggtctga
     4321 ttctggtcga cttcaagctg gagtttggtc tgtacaaagg tgaagtggta ctgggcgatg
     4381 agttctcccc ggacggcagc cgcctgtggg acaaagaaac actggagaaa atggacaaag
     4441 accgtttccg ccagagcctc ggtggcctga tcgaagccta tgaagccgtc gcccgccgcc
     4501 tgggtgtaca gctggactga tttttctgtt catcatcttg ccgtgcagct ggcacggcaa
     4561 gacaaccgct ctcggaatat atgcattgaa cgctcattcc tccgccattt catcccgctt
     4621 tcctgtggta atcttcctct gaaccaccta cgatcatttc tataatgaat atattgttga
     4681 ggtatctatg cgttggcaag ggcgacgtga aagtgacaat gttgaagaca ggcgcaacag
     4741 ctccggtggt ccgtctatgg gcggtcccgg ttttcgcctg ccaagcggta aaggcgggct
     4801 gattttactg atagtcgtgc tggttgcagg ctactatggt gttgatttaa ccgggttaat
     4861 gactggacag ccggtttccc aacaacaatc aacgcggtcc attagcccta atgaagacga
     4921 agctgcaaaa ttcacctcgg tgattctggc aaccacggaa gacacctggg gacaacagtt
     4981 cgagaagatg ggtaagacct atcagcaacc gaagctggtc atgtaccgtg gaatgacgcg
     5041 caccggctgc ggggcgggcc agtccattat ggggccgttc tattgcccgg cggatggcac
     5101 agtttatatc gatctctcct tctatgatga catgaaagac aaacttggcg cggatggcga
     5161 ttttgcccag gggtacgtta tcgcccatga agtcggtcat catgtgcaga aactgttagg
     5221 catcgagccg aaagttcgtc aactgcaaca aaacgcgacg caggcggaag tgaaccgctt
     5281 atctgtgcgt atggaactcc aggccgactg ttttgccggt gtctgggggc ataacatgca
     5341 gcagcaaggc gttctggaaa ccggcgatct ggaagaggcg ctgaatgcgg cgcaggccat
     5401 cggcgatgac cgtttacaac agcaaagtca ggggcgagta gtaccagaca gtttcacaca
     5461 tggcacttct cagcaacgct acagctggtt taaacgtggt ttcgacagcg gcgatccggc
     5521 acaatgcaat acttttggta aaagcattta atttccgggg cagggatggc tgaactgact
     5581 gcgctttaca cattaacagc gcaaatgaaa cgtgaaggga tccgccgctt gctggtgttg
     5641 agcggggaag agggttggtg ttttgatcat gcgcttaagt tgcgtgatgc cttacttggc
     5701 gactggctgt ggatttcgcc gcagccagat gctgaaaacc actgttctcc ctcggcgcta
     5761 caaactttac ttgggcgcga gttccggcat gcggtattcg acgcccgcca cggctttgat
     5821 gccgctgcct ttgcggcact tagcggaacg ttgaaagcgg gaagctggct ggttttgtta
     5881 ctccctgtat gggaagagtg ggaaaaccaa cctgatgccg actcgctgcg ctggagtgat
     5941 tgccctgacc ctattgcgac gccgcatttt gtccagcatc tcaaacgcgt acttacggcg
     6001 gataacgacg ctattctctg gcggcaaaac cagccgttct cgttggcgca ttttactccc
     6061 cgtactgact ggcaccccgc gaccggcgca ccacaaccag aacaacagca actcttacag
     6121 cagctactga ccatgccgcc gggcgtggca gcggtaacgg ctgcgcgtgg gcgcggtaag
     6181 tcggcgctgg cagggcaact catttctcgt attgcgggca gtgcgattgt caccgcgccc
     6241 gcaaaagcgg caacggatgt actggcacaa tttgcgggcg agaagtttcg ctttattgcg
     6301 ccggatgcct tgttagccag cgatgagcaa gccgactggc tggtggtcga tgaagccgca
     6361 gccatacctg cgccgttgtt gcatcaactg gtatcgcgtt ttcctcgaac gttgttaacc
     6421 actacggtgc agggctacga aggcaccgga cgtggttttt tgctgaaatt ttgcgctcgc
     6481 tttccgcatt tacaccgttt tgaactgcaa cagccgatcc gctgggcaca gggatgcccg
     6541 ctggaaaaaa tggttagtga ggcactggtt tttgacgatg aaaacttcac ccatacacca
     6601 caaggcaata tcgtcatttc cgcatttgaa caaacgttat ggcgaagcga gccagaaacg
     6661 ccgttaaagg tttatcagtt attgtctggt gcgcactacc ggacttcgcc gctggattta
     6721 cgccggatga tggatgcacc agggcaatat tttttacagg cggctggcga aaacgagatt
     6781 gccggagcgc tgtggctggt ggatgagggg ggattatctc aacaactcag tcaggcggta
     6841 tgggcaggtt ttcgtcgccc gcggggtaat ctggtggccc agtcgctggc ggcgcacggt
     6901 agcaatccac tggcagcgac attgcgtgga cggcgggtca gccggatagc agttcatccg
     6961 gctcgtcagc gcgaaggcgt tgggcaacag ctcattgcca gcgctttgca atatacgcaa
     7021 gacctcgact atctttcggt gagttttggt tacaccgggg agttatggcg tttctggcaa
     7081 cgctgcggtt ttgtgctggt acgaatgggt aatcatcgtg aagccagcag tggttgctat
     7141 acggcgatgg cgctgttacc gatgagtgat gcgggtaaac agctggctga acgtgagcat
     7201 taccgtttac gtcgcgatgc gcaagctctc gcgcagtgga atggcgaaac acttcctgtt
     7261 gatccactaa acgatatcgt gctttctgac gacgactggc ttgaactggc cggttttgct
     7321 tttgctcatc gtccgctatt aacgtcgtta ggttgcttat tgcgtctgct acaaaccagt
     7381 gaactggcat taccggcgct gcgtgggcgt ttacagaaaa atgccagtga tgcgcagtta
     7441 tgtaccacac ttaaacttgc aggccgcaag atgttactgg tccgtcagcg ggaagaggcc
     7501 gcgcatgcgc tgttcgcact taatgatgtt cgcactgagc gtctgcgcga tcgcataacg
     7561 caatggcaat tttttcactg actccttcaa ttttctccca tggtcattgt gagccagcgg
     7621 cgtaaaatta atgacatcag ttaaggagtt cgccatgaaa catgaccatt ttgttgttca
     7681 aagcccggat aaacctgtgc aacagttgtt actgcttttc ctcggtgtcg gggataactc
     7741 ggtggcaatg ggggaaatag gcagttggtt tgcaccgctg tttcctgatg cgctggtggt
     7801 gagtgtcggt ggcgcggagc cgagcggtaa tccggcgggg cgtcagtggt tttcggtgca
     7861 gggtattacg gaagataatc gccaggcgcg tgtggatgcc atcatgccga cgtttattga
     7921 aacggtacgc tactggcaga aacagagtgg agtaggggct aacgccacgg cgttaatcgg
     7981 tttctctcaa ggcgcgatta tggcgctgga gagtattaaa gccgaaccgg gccttgcttc
     8041 acgcgtcatt gcttttaacg gacgctatgc gagcctgccg gaaaccgcgt ctacagcaac
     8101 gacaattcac ctgattcatg gcggtgaaga tccggttatc gatctggcgc atgcggttgc
     8161 ggcgcaggaa gcgttaatca gtgccggtgg tgacgtgacg ctggatatcg tggaggattt
     8221 aggccatgcg atcgacaatc gcagtatgca atttgccctg gatcacttgc gttataccat
     8281 tccgaaacat tatttcgacg aagcgctaag tggcggtaag cctggcgatg atgatgtgat
     8341 tgaaatgatg taaaagacag attacctggc ctgataagac gcgtgagcgt cgcatcaggc
     8401 atcgttcacc attgccggat gcggcgttaa cgccttatcc ggcctacggt tgagcactca
     8461 gcttacttct tcggttgatc ctttttcggc cagtcgtcgt catcgtccca cttatcgttg
     8521 aaatcacgat gcgggggaag ctccggcttg ttggcgagaa atttcttgtg gtcgacgcgc
     8581 ttgagatctt taatcacgtt cagcaggacg cctaccaaaa agacaatcac cagaatccac
     8641 caatatttag ccagccagtc catgcttatt tcctcttgca gaaccactca tcaggcgacg
     8701 agctgttcca tgatacgttg atacatacgg gcaagtagct gcaggtcggc agcgttcaca
     8761 cattcattaa ttttatgaat agtggcattg accggcccga gttccaccac ctgcgccccc
     8821 atgcgagcaa taaagcgccc gtcggacgtt ccgcctgtgg tcagtagctg cggtttaatt
     8881 tcattatagt gctcaaccgc gttaacgacc gcatccacca gtttaccgcg cgcggtcaaa
     8941 aatggctgcc cggaaagcca ccaatccacc gtatagcgca gttgatgttt ttcaagcagg
     9001 gcaagcacct gcgctttgat catctcatca gtcagttcgg tgctgaagcg gaagttaaac
     9061 tgcacaaaca gttcacccgg aataacattg ttactgcccg ttcccgcctg aatattagca
     9121 atctgcatac tggtcgccgg gaaaaattca ttgccctgat cccactcaat agccactaat
     9181 tcattaagga aaggtgctgc gcgatgtact ggattgtcag ccagatgcgg gtaggccaca
     9241 tgcccctgaa cgccatgaat ggtaaggttg caggttaacg atccgcgacg accatttttc
     9301 accacatcac caaccacttc gatactcgac ggttcgccga ccaggcagta atcgagacgc
     9361 tcattacgtg ccatcaacgc ttcgacgact tttaccgtac cgttgtgggc actggcttct
     9421 tcatcagagg tgatcagaaa tgccagtcgc cccgtatggt tgggatgttg tgcgacaaag
     9481 cgttctgccg ctaccaccat cgccgccagc gagcctttca tatctgccgc accgcgcccg
     9541 aataacatgc catcacgaat ggtgggttca aacggcggat tgatccaacg atcggcgtcg
     9601 ccaggcggca ccacgtcggt atgcccggca aaggctaacg tttcaccttg cccacgccat
     9661 gcccaaaaat tctgcgtatc ggcaaagtcc atgcgttcaa cggtaaaacc gatcgcctgc
     9721 aaacgttcaa tcaacaaagc ctggcatcct gcgtcatcag gactcaggga agggcggcga
     9781 ataagctgtt gtgtcagctc aataaccggg cacgacatag actacacctc atggaaaaat
     9841 tgctgataac tggaatcact gaaacccagc agcataggct taccaggcgc gcagagcaat
     9901 ggacgtttga taattgaagg catttcagtc attaatgccg ccgcagaggc cgcatcggtg
     9961 attttattgc gggtggtttc gtccagttta cgccaggttg taccacgggt gttcagtaac
    10021 gcttcccagc ctaattcgtt gataaaaccg ttcaataatt cgctgtccag cccatcgacg
    10081 cggtaatcat gaaaacgata gtcgatgtta ttggcttcca gccaacggcg agccttttta
    10141 atggtgtcac aatttttgat gccgtaaagt gtaaccataa tgaatccttt ttcgatctat
    10201 gagaataaat actcatttaa gggtgaaaac attttgcctg caaatgatta tcaggaaata
    10261 taacattatc gaagtattca aattaacaac tattaaataa tattaaacat ttttaacgta
    10321 aacattaaga atattcatct tgttatctgt ctgtatttta accagaatta aatcagtatt
    10381 agatgccgta tgaatatctc gaaatgttgc tgtgtatcac atacaaatta tcaccgcagg
    10441 accatagtat ttacataagg tttgtccccc ggaggtagtc atcgcagcaa tcgagtaaat
    10501 tagcttcacc acggtatatt gtttccgtag aatacccata attataagag aggttgttat
    10561 gattgaacgt gaactgggga actggaaaga ctttatcgaa gttatgcttc gtaagtaatt
    10621 cctgagacaa agtacaaaca gcaagaaccc gctgagcagg ttcttaatcg gaaagttgaa
    10681 aaaggcgaca cattagcatg tcgccttttt tattgcttat tccgggcgcg gcttcagcgg
    10741 gaagcggcgg cgcaccagta caaagaacag cggcacgaag taaatagcca gaatagtggc
    10801 cgaaatcatc ccgcccatta cgccagtacc caccgcatgc tgaccaccgg aaccggcacc
    10861 cgtgctggtt gccattggca atacgccgaa gataaatgcc agcgaggtca tcagaatcgg
    10921 gcgtaaacgc tgacggcagg cgtggagcgt cgcttcaaac aggtcgtggc ctttttggtt
    10981 catctcgtta gcaaactcga cgatcaggat ggcgtttttc gccgataaac caatgaccgt
    11041 taacaggccc acctggaagt aaacgtcgtt ttccagcccg cgcatccagg ttgccagcag
    11101 cgcgccgata acccccagcg gcacgaccag cattaccgag aacggcaccg accagctttc
    11161 atacaacgcc gccagacaca ggaataccac cagcaaggaa atggcgtaca gcgccggagc
    11221 ctgcgcgccg gaaagccgct cctgatacga catcgccgtc cactccagac caaagccgtt
    11281 tggcaactgc ttcactaacg attccattat atccatcgcc gtaccggtac tgacccccgg
    11341 tgcggcttcc ccaacaatct caaccgcaga ataaccgtta tagcgttcca gacgcggcga
    11401 gccagtctcc cagcgtgagg tcgcgaaagc agagaagggc accatgccgc catctttatt
    11461 tcggacatac cagagattaa tgtcatctgg cagcatgcga tacggcgcag ctgcctgcac
    11521 atagactttc ttcacacgac cgcgatccat aaagtcattc acatagctcg aaccccaggc
    11581 ggtttgcagt gtgtcgttaa tatcgtcgat agcaacgccc agcgcctgag ctttacgctg
    11641 gtcgatatca atctgcaact gcggactgtc atcgaggccg ttatggcgca cacgggttag
    11701 ctccgggttt tccgccgcca gcgccagcaa ctggttacgt gctgccatca gcgcatcgtg
    11761 acctgctcca gcgtggtcct gcaactccat atcaaaaccc gcagaactac caagaccgct
    11821 aattgctggc gggctgctgg cgataacgcg agcttcttta atcttgttaa acgcctttgt
    11881 tgcacgctcg ataatggcaa acgaggtgcc ggtcttactg tcgcgttcgc tccagtcttt
    11941 caggcggata aacattcgcg ccacgttttg cccgttaccc ccagggccag aaccaacggt
    12001 ggcaaacacc gacatgatgt tgtctttttc atgggtgaag taatatttct cgatttgctc
    12061 aacgactttc agggtctgtt gttgggttga accgctgggc aattgtaccg aggtagtaaa
    12121 catgccacgg tcttccagcg gtaagaacga cgtcggcaaa cgcaggaaca ggaacaccat
    12181 gccgccaagc agcaggacat aaatcacaat ccagcgcagg ctgcggtgga gaattttcgc
    12241 cacccctttt tcgtagcgtt cggcgttgcg gttaaacatc tggttaaacc aggcaaaaaa
    12301 gcctttttgc ccgtgatgct cacctttttt cagtggctta agtagtgtgg cacacagagc
    12361 cggagtgagg atcatcgcta ccagtactga cagcaccatc gccgcaacaa tggtaataga
    12421 gaactggcga tagatggcac cggtggtgcc gccgaagaag gccattggta caaataccgc
    12481 cgaaagcacc atcgcaatcc cgaccagtgc cccctggatc tgccccatcg atttacgtgt
    12541 ggcttcgcga ggagcgagtc cttcctcact cataatacgt tcgacgtttt ccaccaccac
    12601 gattgcgtca tccaccagca gaccgatcgc cagtaccatc gcgaacatgg ttaaggtgtt
    12661 gacgctgtaa ccgaaggcgt aaagtacgga gaaggttccc atcaacacca ccggcacggc
    12721 gatagtgggt atcagcgtgg cgcggaagtt ttgcaggaac agatacataa cgaggaaaac
    12781 cagggcgata gcttccagca gcgttttcac cacgtcttca atggaggctt taacaaacga
    12841 ggttgtttca tacgccacct tgtattccag tccgtgcggg aagtactgcg ccagctcgtc
    12901 gagacgattg agcaccagct ccctgtcgcc atttcgtttg cgccggaggc cagttttacc
    12961 cccagcccgg aggctggctt accattgaag cggctaagat aatcgtattt ctccgccccc
    13021 atttcgacgg tggcgacatc gcccagcctt acctctgagc cgtcttgatt cacccgcaag
    13081 gtgatatcgc ggaactgttc tggtgtttgc agcagtgact gggcgttaat ggtggcgttg
    13141 agcgcctgct tatcgacgga aggtgtacca ccaagttgcc caaccgcaat ctgcgcgttc
    13201 tgtgactcaa tggcatcagt gacatcttta gccgtcatct ggaaactgtt gagtttcgcc
    13261 ggggccagcc agatacgcat ggaatattgc gaaccatagg catcgatatc cccgacgcca
    13321 ttcacgcggc ttaacgggtc ctgaatatta ctggcaacat aatcggcaat atcctgttta
    13381 tccatcgaac catcggtaga gacgaaagca atggtcagaa tattggtatc gccggtttta
    13441 cgcaccgtca cgccctgatt ttgcaccgcc tgcggtaact ttcgcatggc tgattgcagc
    13501 tggttttgta cttgctgcac ggcttcgtcc ggatcggtgc ctgttttaaa acttaaagtg
    13561 acagatgcct gaccggtgcc actgctctga gatgacatat acatgagatt atcgaggccg
    13621 gtcatatttt gctcgataac ctggggcacg gtgttttcca gcgtctgggc cgatgcgccg
    13681 ggatagttag cggtcactcg cacattcggt ggcgcgagat cggggtattg ttcaacgggc
    13741 aatgaaaaaa tcgccagggt ccctgtcaga cacaacagga ttgccagcac ccaggcaaaa
    13801 atggggcgat caataaagaa attcgccatt aaaagaggac ctcgtgtttc tgcgtatcgt
    13861 tgtaggcttg acttgcttca ctgtagcggc aaggtacgag ccaatcgtgg agaaaaaagg
    13921 agttaatgta aattatcatg cccttttata ctgaacctta agtgcaagta ttctttggtc
    13981 agtaggaggc attacatcaa ctgactttcc tcaccctctg cagagcgaaa gctaatactc
    14041 actaacgtgc cgccgccgga aggttgtgaa aaagtcagcg tcccacccag ccgttccgcg
    14101 cgttcgcgca tgatattcag accataatga ccttcgggtt ctttcggttc accgatacca
    14161 atcccgttat cacggatata aaccgtgtga ttgccgtccg gcgcggtgac gcaactgacg
    14221 gcgatttcgc tggcgttggc gtgcttcatc gcattcagca ccgcttcgcg aataatttgc
    14281 aacaaatgca cctgcatttg cgcatccagc gcaagggttg gcagacggca gtcgagggtc
    14341 agtttggcgc tggtttgatt ttgtaacgta tccagcattt ccctcaacgc ggaggggaga
    14401 tccgcctgct gcagcgtcag gcggaaagta gtcaacagct cgcgtaactg ccgataagca
    14461 tcattcaacg cctgggaaaa atcggccatg atactttgtg cggtggcgtt atcttccggt
    14521 atcgaacgct tcagtaacgt caactggata cgtaagtaag aaagtacctg agccagcgag
    14581 tcgtgcaatt cgcgggcgat ggttgcacgt tcttccatca acaataaatg ctgaaaatgc
    14641 ttctgcgcct gattaaagta caaaccgcgt cccagcatcg acgaaacgct gttaagcagc
    14701 ggttctgatg atgaaacgtg actattttgc cagtgcagtt cgccgtaaac cgtctcttgc
    14761 attgtcaccg gtaaaatctg catcggcaat tccgggtttg gttgcccttc gctaatccgc
    14821 cagttttcac cgacatttaa ctccagatat tcagccgctt cattgtcgcg aacaatctgc
    14881 aaaatatggc ggaaacaatg cacatcaatc tggcttgtgt tcagcgcctg cgaacattga
    14941 tacaacacct ccagacgacg cttggcctcg tggagatcgc gggtcttttc ttctactgac
    15001 gcctccagcg aaaggtacaa tttatgcagc tcgctcgaca tctggttaaa ggtttttgca
    15061 agcagaccaa gctcattcgg cagactggta tccagcggcg gcgagtcgaa ctgcccgtgt
    15121 tcaatacgtt gactggcggt aaccagctga ttcagcgggg caaccacctg atggcgtata
    15181 cggcgcaaag taaaaaagac cagcgtgaaa ataccgatac cgccagccag ggaaatcgcc
    15241 accaccagca gcattttgcg ttcagcgtag tgctgtaaag ccagcacgaa caggtctatc
    15301 tgattaacat aattattaat attggcctga taccacggca aatcgccctt gctgagccga
    15361 ttattcatct ccagccagtt ggcattcaga tgcgcatagc gagtttttac tgcttctggc
    15421 acataccaga cgttgagatt ggttaatacc ggtgaatgca gtgcctgctg aaacaactgg
    15481 cgatgtgcat tgagttgtgg actgccactt tgcaagtcgt agcccaggcg gtaactctgc
    15541 atacgcagcg atccggcaat attgatagcc tcagcgtcgc gcaaactgct cgccagagtt
    15601 agcagagcga tacccgtgga aagaatcgac agcagcacaa tgtaaaaaaa ggcccgggcc
    15661 agactggccg agacgggtcg tttaacaatc acacgcgtct tctccacaaa aaatcattaa
    15721 tgttccagtt cgctgaaacg caatttagtc agtgatggga ttatttgagc tgccacagtt
    15781 tatagcgaaa tagttactta ttctgggcac atgaacattg ccgattcccc tgtaagtcgg
    15841 gtaataacaa cactcatata aagaataagg tttttacaac caaaaaagaa ggtcgttatg
    15901 aatcgtttta ttatggccaa cagtcagcaa tgtctgggtt gtcatgcttg tgaaatcgcc
    15961 tgtgtcatgg cttacaatga tgagcaacat gtcctgagcc aacaccattt tcatccccga
    16021 attacggtta tcaaacatca gcagcaacgt agtgcagtga cctgtcacca ttgtgaagat
    16081 gcgccctgcg cccgtagctg ccctaatggc gcaatcagcc acgttgatga cagcattcag
    16141 gtcaatcagc aaaagtgtat tggctgtaaa tcctgcgtgg tggcctgtcc gtttggtacg
    16201 atgcaaatcg tcctgacacc cgtcgcggca ggaaaagtaa aagccacggc gcataaatgc
    16261 gacctttgtg cagggcgcga aaacggtcct gcctgtgtcg agaattgccc ggcggacgcg
    16321 ctgcaactgg tcactgacgt cgcactctcc ggcatggcga aatcccgccg cttgcgcacc
    16381 gcacgtcagg agcatcaacc gtggcatgcc agtaccgctg cacaagaaat gccggtaatg
    16441 agtaaagtcg aacaaatgca ggcaacgccc gcgcgtggcg agccggataa actggcgatt
    16501 gaagcgcgca aaaccggttt tgatgaaatt tatctgccat ttcgcgccga ccaggcacaa
    16561 cgggaagcct cgcgctgcct taagtgcggc gagcacagcg tttgtgaatg gacctgcccg
    16621 ctgcataacc atattccgca gtggattgaa ctggtgaaag ccggaaacat cgacgccgcc
    16681 gtcgagcttt ctcaccagac caacaccctg ccggaaatta ccggacgcgt ttgtccgcaa
    16741 gaccgtttgt gtgaaggtgc ctgtactatt cgcgatgagc acggcgcggt aactatcggc
    16801 aacattgaac gctatatttc agatcaggcg ttggcgaaag gttggcgtcc tgacttaagt
    16861 catgtcacca aagtggacaa gcgggtggcg attatcgggg caggtccggc agggctggcc
    16921 tgtgcggatg ttctgacccg caatggcgtg gcggtgacgg tgtacgatcg ccatccagaa
    16981 atcggtggct tgctcacttt cggcattcct tctttcaaac tggataaatc cctgctggca
    17041 cgccgtcggg aaatcttcag cgcgatgggg attcacttcg aactcaattg tgaagtgggt
    17101 aaagatgtct ctttggattc gcttttggaa caatacgacg cggtcttcgt tggcgtaggc
    17161 acttaccgtt ccatgaaagc gggtttaccc aatgaagatg cgccgggcgt ttatgacgcg
    17221 ctgccgttcc tcatcgccaa cactaaacag gtgatggggc tcgaagagct accggaagag
    17281 ccgtttatca ataccgccgg acttaacgtc gtggtactgg gcggcggcga caccgcgatg
    17341 gactgtgtgc gtactgcgct gcgccacggc gcgagtaacg tcacctgcgc ttatcgtcgt
    17401 gatgaagcta acatgccagg ctcgaagaaa gaggtgaaga acgcccgcga agagggggcc
    17461 aacttcgaat ttaacgtcca gccggtggcg cttgagctga atgaacaagg tcacgtttgc
    17521 gggattcgtt tcctgcgcac gcgtcttggc gagccggatg cctaggggcg tcggcgtcca
    17581 gtaccggtgg aaggcagtga atttgtcatg ccagccgacg cggtgattat ggcgtttggc
    17641 ttcaatccgc acgggatgcc gtggctggag tcgcacggtg taacggtaga caaatggggc
    17701 cgcatcatcg cggatgtgga aagccagtac cgttaccaga ccaccaatcc gaaaatcttc
    17761 gccggtggcg acgccgtgcg tggtgcggat ctggtggtta ccgcaatggc agaaggacgt
    17821 catgcggcac aggggattat tgactggctg ggggtaaaat cagtcaaatc tcactgatag
    17881 cctgcgcaga caaacccgac ttcacagcgt aagataattg ttcatttcgc gctgtggagt
    17941 cggtatgacg caacaaatca ccctcattaa agacaaaatt ctctccgata actatttcac
    18001 cctgcacaac attacctacg atctcacgcg caaagatggc gaagttatcc gccataaacg
    18061 tgaagtttac gatcgcggta atggtgcgac gatcctcctg tacaacgcga agaaaaagac
    18121 cgtggttctg attcgtcagt tccgtgtcgc tacctgggtt aatggcaatg aaagcgggca
    18181 gctgattgaa acctgcgccg ggctgctgga taacgacgaa ccggaagtgt gcattcgtaa
    18241 agaagcgatt gaagagacgg gctatgaagt gggcgaagtg cgcaaattat ttgaactgta
    18301 tatgtcgcca ggcggtgtga ctgagctaat ccactttttt atcgccgaat acagtgacaa
    18361 tcagcgcgct aacgccggtg gcggtgtcga agatgaagat attgaagtgc tcgagctgcc
    18421 gttcagccag gcgctggaga tgatcaaaac cggcgagata cgtgacggta agacggtgtt
    18481 attgcttaac tatttgcaaa cgtcacattt aatggactga aaaataacaa taatatttcg
    18541 ttgtttatta ttggctcaat ccgacaaatc cgattgagcc gcgctacctg cgcaacgaag
    18601 atacgacttg tgctgtttgt ttgaacttct ggggtcgtac cgtccatgcg ctatcgcatt
    18661 ttccttctct tttttttcgc tttgttgccg acgtctttgg tgtgggcggc accagcgcaa
    18721 cgggcgtttt ccgactggca ggtcacctgt aataaccaaa acttctgcgt ggcgcgtaat
    18781 acgggcgatc ataatggact ggtgatgacc ctgagccgca gcgccggggc gcataccgat
    18841 gccgttttac gtattgagcg cggcggattg aagtcgccgg aggcgtcaga aggggagata
    18901 gcgccacggc tgctgttaga tggcgagccg ttggcgttaa gtggtgacaa gtggcggatt
    18961 tcaccatggt tattagtaac cgatgatacg gcaaccatca ccgcgttttt gcagatgatt
    19021 caggaaggga aggcgatcac cttacgcgac ggcaatcaga ccatttcgct gagtggctta
    19081 aaagcggcgt tgttgtttat tgatgctcag caaaagcgcg ttggcagtga aaccgcgtgg
    19141 atcaagaaag gggacgaacc gccgctcagc gtaccgcccg cgcctgcgct gaaagaggtc
    19201 gcggtggtta acccaacgcc gacgccactc tcactcgaag aacgcaacga tttgctggat
    19261 tatggaaact ggcggatgaa tggtctgcgc tgctcgcttg atccattgcg tcgtgaggtg
    19321 aatgtcactg cgctgactga tgataaagcg ctgatgatga ttagctgtga ggcaggggcc
    19381 tataacacca ttgatttggc atggattgtg tcgcgtaaaa atccgctggc ctcgcgcccg
    19441 gttcggttgc gtttgccgtt caacaacggg caggagacga atgaactgga actgatgaac
    19501 gcaacatttg atgagaaatc gcgtgaactg gtgaccttag cgaaagggcg cggattaagc
    19561 gattgtggca ttcaggcgcg ctggcgcttt gacggtcagc gttttcgcct ggtgcgttac
    19621 gccgcagaac ccacctgcga taactggcat gggccagacg cctggcccac gttgtggatc
    19681 acccgttaaa caaaatggcg gggacatgta ggccggataa gacgctgtag gccggataag
    19741 acgcgtcaga gtcgcatccg gcctacagcg tccggcaatc agcatccggc gatcaccatc
    19801 aggcaccttt cactcccagc accttatgcg cttttgccac aatattctcg gcggtaaagc
    19861 caaagaacgg gaacagctta tccgccggag cagattcccc ataacctgtc atcccaacaa
    19921 tcgccccttt caaaccaaca tacttgtacc agtaatcggc aatacctgct tccaccgcca
    19981 cgcgagccgc aacgttagaa ggcaacaccg actcccgata ttcctcatcc tgggcgtcga
    20041 aaatatcagt cgagggcagg gaaactacgc gtacattgcg accttctccc gctaatttct
    20101 ctgccgcttg cagggggatt tccatctctg aaccggtggc aatcaaaata atatctggct
    20161 taccgccgct gtctttcagc acataaccgc cacgggcaat ctcttttacc tgatccggcg
    20221 tacgttccac ctgggccaga ttctgccttg agaggatcag tgccgtcggt ccgttgtggc
    20281 gctcaaccgc cagcttccag cccaccgccg cttccacctg atcgcacggt cgccaggtgc
    20341 tgaaatttgg cgttaagcgc aggctggcca gttgctcaac agcctggtgc gtcggaccat
    20401 cttcgcccag gccaattgag tcgtgggtat aaaccataat ctgccgcgct ttcatcagtg
    20461 ccgccatccc cgcggcgtta cgggcgtatt caacaaacat caggaacgtg gcggtatacg
    20521 gcacaaagcc gccgtggtgc gcgatgccgt tggctatagc ggtcatgcca aattcacgca
    20581 ccccgtagtg aatgtagttg cccgccggat cttccttcag cgaaacagaa cctttccaga
    20641 tggtcaggtt gctggagcca gatccgccga accgccgagc aactcaggca gcatcggc
//
LOCUS       DADMIB010000065        20659 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.065, whole genome shotgun sequence.
ACCESSION   DADMIB010000065 DADMIB010000000
VERSION     DADMIB010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20659
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.065"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..1220)
                     /locus_tag="JNZ89_002210"
     CDS             complement(<1..1220)
                     /locus_tag="JNZ89_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000896475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8936082.1"
                     /translation="MAGAHEFRQHGFHARRRAEIISPLAQSETVGHEAADMAAQALGL
                     SRRQVYVLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKR
                     SLAAFHREVTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEP
                     PAVTAPLEQVQIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSA
                     VSVGLCLVHVACDKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGI
                     RLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLREL
                     ERWLTLAVGTYHGSVHNGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTL
                     TRTGFVIDHIHYYA"
     gene            complement(1538..2386)
                     /locus_tag="JNZ89_002211"
     CDS             complement(1538..2386)
                     /locus_tag="JNZ89_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001057990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HAY8936083.1"
                     /translation="MNNDELATRRAQAIAEDRCFSKGRLRDEFRMKPAPGAEPVKWYK
                     NTYGGRFAVYRIADCVPMREKRPLTSKQQLAGQRLSVLSRLNSTSGRMARQAYDWLSL
                     APLFLDTETTGLDNTAEALEIGLTDAAGQVVFETRLKPTVAIGAQAAAVHGISEQALC
                     GAPSWTDVARQLRHAIGDRPVIIFNARFDIRILKQTAAAHSDPADWLEELTVYCAMEL
                     AAGYYGATNRYGTISLACAASQAGLTWEGQAHSAIADARMTAGVVNAIAAYHLELLQE
                     QARLKI"
     gene            complement(2426..2707)
                     /locus_tag="JNZ89_002212"
     CDS             complement(2426..2707)
                     /locus_tag="JNZ89_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001585073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HAY8936084.1"
                     /translation="MMEIFWTMLASQDRKRIREYIAEQNLMAAIELDERIGYSASSLA
                     GQPYKGRNGRVEGTRELVIHPHFVLVYEVDSQWGKVYILRVLHTAQKWP"
     gene            complement(2704..2973)
                     /locus_tag="JNZ89_002213"
     CDS             complement(2704..2973)
                     /locus_tag="JNZ89_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936085.1"
                     /translation="MAQVNMSLRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQ
                     HNTWFRDQVAAGRQQLEHGDVLPHDMVESSAAAWRDEMSRKVAGK"
     gene            complement(3028..3186)
                     /locus_tag="JNZ89_002214"
     CDS             complement(3028..3186)
                     /locus_tag="JNZ89_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001700046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936086.1"
                     /translation="MAESGYGLAGLGMGKVKSINQYRLTPGFGGFTPVSHVTTACRLP
                     CRWRGISW"
     gene            complement(3882..4913)
                     /locus_tag="JNZ89_002215"
     CDS             complement(3882..4913)
                     /locus_tag="JNZ89_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HAY8936087.1"
                     /translation="MAGLKNTPYNAVHWSQLAPEEQIRFWEDYEAGRATTFLVEPERK
                     RTKRRRGEHSTKPKCENPSWYRPERYKALSGQLGHAYNRLVKKDPVTGEQSLRMHMSL
                     HPFYVQKRTYAGRKYAFRPEKQRLLDAVWPVLVSFSDAGTHTVGMSVSRLAREISPKD
                     SKGKVIPELEVTVSRLSRLLAEQVRFGVLGVSEETLWDRETRQRLPRYVWITPAGWQM
                     LGVDMVKLHEQQQKRLRESEIRQQLIREGVLREDEDISVHAARKRWYLQRSQDALKHR
                     RAKAAASKRARRLKKLPADQQIHEMAEYLRKRLPPDEAYFCSDDHLKRMAIRELRQLE
                     LTLAAPPPH"
     gene            5886..6149
                     /locus_tag="JNZ89_002216"
     CDS             5886..6149
                     /locus_tag="JNZ89_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HAY8936088.1"
                     /translation="MPYHKDRNLYFLSSSMVAQAGQALAWPVSDDAGIPTPVWAITNE
                     RRNSVIAFLVVIGDLCYVTSTDTETPGHHSVGRHVSRAINKPA"
     gene            6118..6354
                     /locus_tag="JNZ89_002217"
     CDS             6118..6354
                     /locus_tag="JNZ89_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000483804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraA"
                     /protein_id="HAY8936089.1"
                     /translation="MFPELSTNQLKVCVFYAMGVPYDAIAQNCRLSPETVRTYLKRSL
                     KNLNLEGYDALRSAVLMRTFVFMISNTAKENEKM"
     gene            6796..7329
                     /locus_tag="JNZ89_002218"
     CDS             6796..7329
                     /locus_tag="JNZ89_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001303319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusG"
                     /protein_id="HAY8936090.1"
                     /translation="MNIEHLNNRNWYLAQYNTAGKNRESLFSWLNEQNVVPWTPLITR
                     KIRRADSRCCYRERIFAIFPGYFFILANFDIHPVSALRRHSAFIDFVKFGGEIKPVNK
                     DIVDGLMKIYPDPVLNPGAREELNAASSIWLTKAQYQYLLRMENTLQPESRISLLLEL
                     VSNAEHHGFMERLVNIP"
     gene            7583..8266
                     /locus_tag="JNZ89_002219"
     CDS             7583..8266
                     /locus_tag="JNZ89_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraC"
                     /protein_id="HAY8936091.1"
                     /translation="MTTTEHPVRQLLWCALNALKTAQENHNITSETGLRHYLLEWLSG
                     ASRHPEFRSLPGEIMALKALTEKDRNIPIIGTLNTLFLSSATVGECPLFRFRAALGKL
                     QKAGWRTYVCPWPERVFNESIERACSGKRHLLQLSRTEECFLPTGDMRAPVTLQLITP
                     LHRKTMQLLEAAELIFSDEGFQVVRGYEHQFGIERRETLFHTLFIGLPSLPEDVWGAT
                     QEQTTITLH"
     gene            8280..8846
                     /locus_tag="JNZ89_002220"
     CDS             8280..8846
                     /locus_tag="JNZ89_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000776429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraD"
                     /protein_id="HAY8936092.1"
                     /translation="MKLQYRIPLAIYSVWCIIAILLCKDGLYQMNIWTLVEILGMIAL
                     PLLVRPFFILLRIIFRKNSFKTKDMSDNHTVCVFLSALADTSSKKAIKKHFKQLLEKL
                     PPLLRQKKRIYMKSHLLTEARTQKLICSLRRKGLDVTAERRESAMNSVMFRILIVSRI
                     LSQWKVPHINPRCGIVILTLKNDSGNRE"
     gene            9114..9368
                     /locus_tag="JNZ89_002221"
     CDS             9114..9368
                     /locus_tag="JNZ89_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001136193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilI type IV pilus biogenesis protein"
                     /protein_id="HAY8936093.1"
                     /translation="MPQQHPGRLQVLVVDTHCKRKLFSTKTQTDPDELARRFCTPDNC
                     LVVVLCNNRFLFRLERAPGSHCRWRKGSRSRHQHLQDWLS"
     gene            9411..9863
                     /locus_tag="JNZ89_002222"
     CDS             9411..9863
                     /locus_tag="JNZ89_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000008891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pili assembly chaperone"
                     /protein_id="HAY8936094.1"
                     /translation="MSFLFKLTIAILIVFAILFPILISSDNKLSALFWKIPKDFWVFL
                     IIMYGAIITVVFIESSEQARIRRQQYLQQYKMPNEIHENVVIENSIISRETTDDESDI
                     NTLYLDSFKSKNNCKSFETNSNLLDKNGKPVEIMVCDVQELHFFVPKN"
     gene            10537..11604
                     /gene="pilL"
                     /locus_tag="JNZ89_002223"
     CDS             10537..11604
                     /gene="pilL"
                     /locus_tag="JNZ89_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001360287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis lipoprotein PilL"
                     /protein_id="HAY8936095.1"
                     /translation="MKKNYLTLILPSLLSGCAGISGSNNVAPSDTPALVFVDGQISES
                     AGVLALTQQRLSPPKITPPPRVSVPETVKTAHPVSESRPLPSPTISQNFSRLIITGKP
                     GSAPVTLSPTARNRTVSQWIKTLLPEGWKFRQENAATPKLNTKLVSWSANDQWTRSLN
                     RLLEEQHLWGHLDWDNKTLTVTTSAAAPAQDTATTISPAAMVTTSTSPESPTTANSQN
                     KPRNPFRGNSVSSSTPAATPTPTGSTVKSIPLMTGTPVKPVSQGKEWRAPAGTTLREN
                     IIKWAEETKCESMASTHWMVIWPLSVTDYRLDAPLMFRGSFESAMEQVFELYRTAQKP
                     LYAQASRMQCIITVSDTRDGR"
     gene            11604..12041
                     /gene="pilM"
                     /locus_tag="JNZ89_002224"
     CDS             11604..12041
                     /gene="pilM"
                     /locus_tag="JNZ89_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001744073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HAY8936096.1"
                     /translation="MGWLVMAVGLTILIITGSYQNQKMSETTNAQQYASASVWASQIL
                     MIANRINDIRYVSGQQDGVISSDKLALPVTPDSRIKHQLQQGRLWVWMPEQPGLVETL
                     RSKSRGSALIGIFQNGQLTWLSGTATGLTPPAGITAGSVVYVN"
     gene            12055..13737
                     /locus_tag="JNZ89_002225"
     CDS             12055..13737
                     /locus_tag="JNZ89_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001744074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN family type IVB pilus formation outer
                     membrane protein"
                     /protein_id="HAY8936097.1"
                     /translation="MKKSHQRSMKLAVLPCMIAVALSISGCTFSEINKMQKKAQEDSA
                     HAREKVSALSARKSQALTWLDNQWINPVPVAQVSREKKQTAPACYITQARKGEITLQE
                     LGQRITAVCGIPVIITPDAANSTLEGGATRQMTGTLPAPDENGRLPLSSLGSTTMTTS
                     TQPLTLNNLMWQGDINGLLDLMASRSGLYWRMDNGRIVFYLTETRTYPLHMLNTKTSS
                     SSSVSSGSTSTMGATGGQDNSASGDATSSQSTTVGQEYDLYEDIRKTIEAMLTPEKGR
                     YWLSASSSTLTVTDTPAVQEAVARYVDEQNSIMNRQVALNVQVLSVSNTRNEQFGLDW
                     NLVYKSLHSAGATLNNASGDFTGATSAGVSILDTATGNAAKFSGSSLLIKALSEQGDV
                     SVVTSQESTVTNLTPVPIQMADQTVYVAQSATTTTTDVGATTTLTPGMITTGFNMTLL
                     PLIQKTGNLQLQMNFNLSDPPTIRSFTSKDGNSYIEMPYTKLRSLSQKVNLKEGQSLV
                     VTGFDQNNTTTSKAGTFTPANPLFGGSQTGKNERSTLVIIITPTFPSGGNNG"
     gene            13730..15025
                     /gene="pilO2"
                     /locus_tag="JNZ89_002226"
     CDS             13730..15025
                     /gene="pilO2"
                     /locus_tag="JNZ89_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001682966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4b pilus protein PilO2"
                     /protein_id="HAY8936098.1"
                     /translation="MADEDINPVVLLADPKVNHRVWAACLKWSPVVKKQRVPSHQKHK
                     PHVKSRRLTSLKVTVGSRSSRGKISRITGTGILARPERNHYFSLALAFCSWVRNGYGV
                     FRYSDKELLFLASINGQPAVMADLSGNDADVAQKVSLFLTMNEEPPEKWQVVSPLEHP
                     DNWESIITRLSSADLRRCKLTVGNRSKFTLPAVLFLVAASAGTVFWMTQPEPDVVPTP
                     EEIAARARLQFKKPDPPPELPHPWASQPVISDFLKACADLRKPSPVALEGWKLTGGTC
                     TPETFTLIYERQPGGTIEGFLARSKEIFNVIPDFNLKDGARLASVTRPLPSLPRRDEA
                     VPTPSEQLMRVFTWFQKKQLTPAINEIAIPEPLPGNDGEPAPVQKWKEYQFSLSTPVN
                     PDELFPLFQDTGVRLSNIHFELNGGTFSYSSEGHIYASR"
     gene            15012..15464
                     /gene="pilP"
                     /locus_tag="JNZ89_002227"
     CDS             15012..15464
                     /gene="pilP"
                     /locus_tag="JNZ89_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilP"
                     /protein_id="HAY8936099.1"
                     /translation="MRPGKLLIIPSIFFFSGFSFATTQPLVTIGELEAQQNRNILLQA
                     KVQGAQLQKQLEESDVTSSSETVSGFSGVTASLPSVSEQPTSKNRKELPVIMEINGKD
                     KRLNAVLRMADGRQTSVTTGSQLPGTSVTVKSISLSGVTLSDGTTLTF"
     gene            15475..17028
                     /gene="cpaF"
                     /locus_tag="JNZ89_002228"
     CDS             15475..17028
                     /gene="cpaF"
                     /locus_tag="JNZ89_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000362202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component"
                     /protein_id="HAY8936100.1"
                     /translation="MDKYNLKDALLFISRGDTHEILIETNQRTRPDVQSNLQELLKLY
                     PDINPKVVSLSELQEAGQDEKNRGPKERIIHLKDLADVSESEKKVLSYFETARKLGAS
                     DIHFLISESIFKVRMRIFGELQTVDEDQPALGYSLCATAILSMADVTETSFFPQREQD
                     ARLSPQLMRKIGIFGARYSHRPTGDGLIAVMRLIPDDGDKVPTFKQLGFIPEQIRLLN
                     IMLRRPEGKIVLSGPTGSGKSTTLRSACRVYLDDNQGRHLLTIEDPLEGQILGATQTP
                     IICDKSDEDAVKLAWSRAISSAMRLDPDAIMEGEMRDLISMMSTTYAAQTGHIVLTTL
                     HTNSALGIPERMITMGMNADLICDAQLLIGMISQRLVPTLCPSCRIPWEKRAPELSDD
                     ERDYLERHCNKDSLCSTDNIWFRNHHGCSECNHDVIINGRKRGEIGKGLTGRTVIAEV
                     IEPDNRLFQILKTRGKVAARKYWLENMKGISRVEHLLRRINEGLVDPLEADRIIPLDE
                     DERLSIDDV"
     gene            17041..18138
                     /locus_tag="JNZ89_002229"
     CDS             17041..18138
                     /locus_tag="JNZ89_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001699973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilR"
                     /protein_id="HAY8936101.1"
                     /translation="MREMNFSQRLRRFIVRKTFSAPYRVQFYEALRFLLENKQPLKTA
                     LEQMRDAWTDFGRKWHPFAELATDCIESLRENSGENSLEYTLSLWVPQEEAAVISAGI
                     RSGSIVDALQFATTLTDAKEQIHQAIWQMAIYPVGLLIMMTGTLYVLNTELIPELSKI
                     SSPDSWSGALGFLYGLSVFVDNYGAICAVLFAVITGLISWSLPNWKSPDSVRTFADKI
                     MPWSIYQDIQGATFLLNMAALLKAKMTTLNSLNILQEFASPWLSTRLDSIIYRVRQGD
                     HLGLALRQCGYQFPSREAANFLSLLQGDGATELISNYGQRWLSQTLQRVKKRANVIRL
                     IMLIFLVMSLMLLVFAIMDIQSISDNSMGNF"
     gene            18156..18770
                     /locus_tag="JNZ89_002230"
     CDS             18156..18770
                     /locus_tag="JNZ89_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000959783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilX"
                     /protein_id="HAY8936102.1"
                     /translation="MLVENINTTLTGNNKKNEPHDKGWAILEQGTIALVVLFVIVVVL
                     GSLYALRTRANVATETANIQTIITSAQSLLKGSDGYTFTSSAKMTGALIQMGVIPSGM
                     TVQGDKTSGTATLYNAWGGAVTVAPASTSGFNNGFTVTYDKVPQDACIQIATRISKTG
                     LTNGITLNSTAHSDGKVTTEEASTQCKADNGSTGTNKLIFTING"
     gene            18780..19340
                     /locus_tag="JNZ89_002231"
     CDS             18780..19340
                     /locus_tag="JNZ89_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HAY8936103.1"
                     /translation="MSGGTVPLRLISLILLFSLIPPARASYVAPKQIWTNKWDNCFAA
                     AGARYQIEPLLLKAISAGESSLRPGAININKDKKTGKASSTDYGLMQINSTHIPKLIN
                     MGVIKKSEDLITKPCLNIHIGSWILARHFQICGVSWNCLGSYNAGFRKDRHETREQYA
                     NKIWRIYRDMKGICLPGQGGRQCRQS"
     gene            19325..19981
                     /locus_tag="JNZ89_002232"
     CDS             19325..19981
                     /locus_tag="JNZ89_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001193550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY8936104.1"
                     /translation="MQTIVGISLSPVYILPLMFTFSIIGRTLLFRVRYFLSDTGHLWY
                     KTHPAVLSGIWLYSIAVALIILSSSPLLYRIHAVLILSFILQMAVTDALTGLLPGTFT
                     RRFLIAGMLSQITTDIWWFRTTEFATAAIVLFCLHKLVNRHRLNIGTGDLWLIAGITA
                     WSGLYNAIWCVLLGTGGFVLWHSTWCIKGHKEGPLGPWLCFGHVLLLLDNLYQPLWVI
                     "
     gene            19981..>20659
                     /gene="pilV"
                     /locus_tag="JNZ89_002233"
     CDS             19981..>20659
                     /gene="pilV"
                     /locus_tag="JNZ89_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001393542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
                     /protein_id="HAY8936105.1"
                     /translation="MKKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEA
                     RLVSNWTSAARSYIGKNYTTLQGSSTTTTPAVITTTMLKNTGFLSSGFTETNSEGQRL
                     QAYVVRNAQNPELLQAMVVSSGGTPYPVKALIQMAKDITAGLGGYIQDGKTATGALRS
                     WSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGS
                     NNLNNVGA"
BASE COUNT         5434 a         5178 c         4854 g         5193 t
ORIGIN      
        1 tcggcgtagt agtggatgtg gtcgatgaca aagccggtgc gggtcagcgt gcgccggagg
       61 atcggcagaa aatcgaccag gaacgaagta gcgcgtgtga cgacggccgg tacgccgaca
      121 cgcgccacgg cctcggccca gcgcgcggcc ggcggttgga gcaggccgtt gtgcaccgaa
      181 ccgtggtagg tgccgaccgc caatgtgagc cagcgctcta gctcgcgcag cgtcagggcg
      241 gccttgtttt cggaatcgta gtcgccgcgc tggtcagggt tggagaaggt cgttcccggc
      301 agttcgtcgt gaatcatctg catcgccgtg ccgatgatcc gttccacgat gccgccatag
      361 tgcggctgtc ccagcgggcg atagtccagc cggatgccat gctgctcgca accccggcgc
      421 agggcctcgc tcttgaactc ggccgcgttg tctaggtaga gcagcaaggg cttgccgctc
      481 atctgccaat ccatttccac gttcagtcct tccagccaag ggcgcttgtc gcaggcgaca
      541 tgcacgaggc acaggccaac cgaaacggca gacggcgctt ccagcgtgac gaccatgccg
      601 agcacgcagc gggtgaacac gtcgatggcg agggtcaggt acgggcggcc aataggttgc
      661 cggtcgcggt catcgaccac gatcaggtcg atgaccgtat ggtctatctg cacctgctcc
      721 agcggcgcgg tcacggcagg aggctcgccg cccacacctt gtaggtcacg agcggcatcc
      781 tggccttccc gccggcggat gaccttgcgc gggtcaaggc tagcgatccg taaggccacg
      841 gtattgcgcg ccggcactcg cagtttttga gccttgcaca cctgagtgac ttcgcggtga
      901 aaggccgcta ggctgcgctt ctgcttggtc aggaaccgct tttgcagtag ctcgtggatg
      961 acgcgctcga ccggttccgg caagcgcccc ttacctttac ctccaccgga ctggccgggc
     1021 accagatccg tcacgaggcc gctgccttgc cgggcacgcc ggatcagaac gtatacctgg
     1081 cgccgagaca agcccagcgc ctgagccgcc atatcggccg cttcgtgccc gaccgtctcc
     1141 gactgcgcca acggactgat gatctccgca cgacggcgcg catggaaacc gtgctgtctg
     1201 aactcgtgtg cgcctgccat gcacgaaagg ggaatgtttc ctgcccgttg atcgcgtcac
     1261 tacagggcga agcaggcctg gcaaggtcag ctatgcctta gcgtgcttta ttttccgttt
     1321 tctgaggtgc ccccagccag ataatccttt tcaagttttt cagccgtgta gcacctgccg
     1381 cctaaaaaaa gccgcatggc ctccctggtt ttgtctctca catatcatcc ctcattaatg
     1441 ctaatgtaca catacattag cattaacatg ctgacagcaa caagcggcgg atttacgtct
     1501 ggataacgta aatgattgcg gtatacaggc caggcggtca gattttcagc cgtgcctgtt
     1561 cctgcagcag ttccagatga tatgcagcaa tagcgtttac cacccctgcc gtcatccgtg
     1621 cgtcggcgat cgctgagtgt gcctgccctt cccaggtcag tccggcctgg ctggcagcac
     1681 aggccagtga aatcgtgcca tagcggttgg tggccccata atatcctgca gccagctcca
     1741 tcgcacaata taccgtcagt tcttccagcc agtcagccgg atcgctatgt gcggcagcag
     1801 tctgtttcag aatgcggatg tcgaaccggg cattaaagat aattactggt cggtccccga
     1861 ttgcatgacg cagttgccgc gccacatctg tccatgatgg tgcgccgcag agagcctgct
     1921 cgctgatacc atgcacagcg gcggcctgcg ccccgatggc gaccgtgggc ttcagcctgg
     1981 tttcaaatac cacctgaccg gccgcatcgg tcaggccgat ttccagggct tccgcggtat
     2041 tatccagtcc tgtcgtttca gtatccagaa agagcggtgc cagactcagc cagtcatatg
     2101 cctgccgtgc catccggcca ctggtgctgt taagtctgga taaaacggaa agtcgctggc
     2161 cagccagctg ttgtttactc gtcagagggc gtttctcacg catcggaaca cagtctgcaa
     2221 ttcggtatac agcgaacctg ccaccataag tgtttttata ccacttaacc ggctcagcac
     2281 cgggggctgg tttcattctg aattcatcgc gcaaacgtcc tttcgagaaa cacctgtctt
     2341 cggcaatcgc ctgcgcacgt ctggtggcca gctcatcatt attcatggtt attgcatctc
     2401 ctttccttat atccggacag cccctctatg gccacttctg tgcagtatgc aacacgcgca
     2461 ggatatacac ttttccccac tggctgtcga cctcataaac cagaacaaaa tgcgggtgaa
     2521 taaccagttc ccgggtacct tccacacgac cgttgcggcc tttatacggc tgcccggcca
     2581 ggctgctggc tgaataacca atccgttcgt ccagttcaat ggcagccatc aggttctgct
     2641 ccgcaatgta ctcacgaatg cgcttcctgt cctggctggc cagcatggtc cagaatatct
     2701 ccatcattta ccggcaacct tcctgctcat ttcatcccgc catgctgcag cagaggattc
     2761 gaccatgtca tggggaagca catcgccgtg ctcgagttgc tgacgtcctg ccgcaacctg
     2821 gtcacggaac caggtattat gctgccgttc aacggtctgg cgcataaaat cccggattaa
     2881 ctgagagcca ttacggtcca tgctttttgc agcggccata aaagcatcct tcagttcagc
     2941 gtcgattctt aaactcatat taacctgtgc catttatcac ctcgtcatta ctacgtatat
     3001 acacagtata taacgattca gatatcgtca ccaggatatg ccgcgccagc ggcatggaag
     3061 gcggcacgct gtggttacat gtgataccgg agtaaaaccg ccgaagcccg gcgtcagccg
     3121 gtactgattg atagatttca ccttacccat ccccagccct gctaagccat acccgctttc
     3181 agccatgaga gagtttctgt gcgcggtcgg agtggtcccg acgagggttt acccgaagtc
     3241 ggggcgtatc tccgcgttag cgggccgtca gggccgctta cgagcgtgta ctgagaacat
     3301 ccagccagaa gactgacagc gatgataatg tagttacaac attcataatt aaaagcgatg
     3361 ttgttcccgc cctttgggcg ggggcggcct cgcttttcag ttatgagggg tgggcacggt
     3421 gctgcgtttg tgtggtgttt ttattcctga tgtctttttg ttgtggtttc agaacggtga
     3481 ggttcggggc ccgcgcgtta gcgtgggagg tgcttttaga ttctgagcgg cgcggccttg
     3541 gccgctgcaa gcgaaggcct ctttgtattt gttcacagtg gtctcagaga taaagatttt
     3601 ccctgcggcg aagcaacgca ggggattaaa taatggggtt aagactatat tgcaggtttg
     3661 ctgtttcagg tttgcagctt cttaaagttc tttgtttgcg gatttatgtg gataactgaa
     3721 acaacgtggc catgttctga tgactgatgc gtggttttat gggcagatat gcccctctga
     3781 ggggatttaa ggtgattact gcggattttg ggctgagcgg aaccagcgcc gaaagccccg
     3841 gaggggctgg tgatgattca gtgctgaggg aatggtgctg tctagtgcgg tggcggggca
     3901 gccagcgtca gttcaagctg acgcaactcc ctgatggcca ttcgcttcag atggtcatcg
     3961 gaacaaaaat aggcttcatc cggaggcaga cgcttcctga gatactctgc catctcatga
     4021 atctgctggt cggcaggcag tttcttcagg cgtctggcgc gcttactggc tgctgctttc
     4081 gcacgacggt gtttcagcgc atcctgactg cgctgcagat accagcgttt tctggccgca
     4141 tgtacggaga tatcttcatc ctcacgcaga acaccttccc gaatgagctg ctggcggatt
     4201 tcactttcac gcagtcgttt ctgctgctgt tcgtgaagtt ttaccatgtc gacgcccagc
     4261 atctgccagc ctgccggtgt tatccagacg taacgtggca gacgctggcg ggtttcacgg
     4321 tcccacaggg tttcctctga aacacccagc acaccaaaac gtacctgttc ggccagcaaa
     4381 cgggaaaggc gggagaccgt cacttccagt tccggaataa ccttcccctt gctgtctttc
     4441 gggctgattt ctctggccag acgggaaaca ctcatgccta cggtatgtgt gcccgcatca
     4501 ctgaagctga ccagaaccgg ccagacggca tcgaggaggc gttgtttttc cggacggaaa
     4561 gcatatttgc gaccggcata cgttcgtttc tgcacgtaaa aaggatgcag agacatgtgc
     4621 atgcgcaggc tctgctcgcc ggtcaccggg tcctttttca ccagacggtt gtaggcgtgc
     4681 ccgagctgcc cgctcagcgc cttatagcgc tcaggacgat accaggacgg attttcgcat
     4741 ttgggtttgg tggagtgctc accacgacga cgcttcgtgc gcttcctttc cggttcaacc
     4801 aggaaagtgg tcgcccttcc cgcttcatag tcttcccaga aacggatctg ctcttcgggt
     4861 gctaactgac tccagtgtac tgcgttatat ggagtattct tcagacctgc cacaagctgt
     4921 cgcttatggc ggagcgattg tgccgtgtat ttatacactg cacagggttg aatctctggt
     4981 acggtttcat tatactttac ccgtattctg tgaggccccc actatctttc gtcgttccgc
     5041 caagttcgta agaaagatag tgggggtttt ccttttatgg cttccggaac atcttcagtc
     5101 ttctgactta ctgcccgtac atgccatctc tcctgaatgc cttatggcgc attctgccgt
     5161 ccggctttcg ccgctttgct ccacagagtg ccaccctctg cacagctaat aacagccgaa
     5221 atatacccgc tttacgttaa tttgaaaagc attacaacga tctcttctct tccagtgcct
     5281 cctcactgat acctctaata agttaatctt gacctgcgtc aaaaaaataa aatctatttt
     5341 taaaagcaga tttttctgct ttagatcttt cttttggatt aaaagatcga cttttgtcct
     5401 actcacgatc atttatctta caaccgatct acccaacaga ataatattct gttttaatgc
     5461 aattaaacga tctaaataac ctttaaaaaa tcattttgta gatcattcga tcgtaaatag
     5521 aatgattctt agatgataaa accatttgtt acacaacccg ccaattgtgt aacaacagcc
     5581 tctacaagag catatttgtt catatgttcg tcagaactgc ggattgtctg gacgagggtc
     5641 agacaccgtt tcgtgcatat ggaccagcat gttcgaacgc cacaaagcag aagcatcatg
     5701 cctggatcgc ttcggcgcgg agcgttaagt tttgacgctt ttttgtatgt tttttaagct
     5761 gttagttgac tcggtgcgtt atactaagta ccctttactg gtcacaggca aaactgtgat
     5821 cgggcgtagg aacccgcgta gtcatcgtcg gcgcagaagt taatttcttc atttggcgtc
     5881 gttttttgcc ataccataaa gacaggaact tgtatttctt gtcgtcatct atggtagctc
     5941 aggcggggca ggcattagcc tggccggttt ccgatgacgc cggtattcct acccccgtct
     6001 gggctatcac caatgagcgt aggaactcgg tgatagcgtt tttagttgtc atcggagacc
     6061 tttgctatgt cacctcaact gatacagaaa ctcccggcca tcactctgtt ggaaggcatg
     6121 tttcccgagc tatcaacaaa ccagcttaaa gtctgcgttt tttacgcaat gggtgttcct
     6181 tacgacgcca ttgctcagaa ctgtcggctt tctcccgaaa cggtacgaac ctacctgaag
     6241 cgaagcctga agaatttaaa tctggaagga tatgatgcac ttcgctctgc tgtgctgatg
     6301 cgaactttcg ttttcatgat tagcaataca gctaaagaaa acgaaaaaat gtgaacaggt
     6361 gtccccatta aaggggacac tttcatggaa attgcatttt gcactttaca ggcgatccca
     6421 aattgataaa cataaacacc aagcacaagt tactttaata aagcaaatca cttcagacgg
     6481 tgtcccagtt atttgtatct ggctcatgcc cgatatatgg cgaccttact ctgaactgac
     6541 gtgctgatgt tttatttcgc gtatcacaat actgtgccac tgtattgctg atattagtgc
     6601 ttagccgttc tttatctgtg agttcgccaa atcaccgata cagaacgtac tagagtctgc
     6661 tggttatatg cctgtcagaa ctgcagttta tccagatatg ggctggacac tgcttcagac
     6721 atatgattta gcatattcgc ctgacatcgc aaaatcgtcc atcatggatc ggttttgcgc
     6781 ggagcgttga acttcgtgaa tatagaacac ctgaataacc ggaactggta tcttgcgcaa
     6841 tataatacag ccggcaaaaa cagagaatct ttattctcat ggctgaatga gcaaaacgtc
     6901 gtaccatgga ctccattaat aacaagaaag ataagacggg cagactccag gtgctgttac
     6961 cgtgaaagaa tattcgctat ttttccaggg tactttttta ttctggctaa ttttgacatt
     7021 cacccagtat cagcattacg tcgacatagc gccttcattg atttcgtgaa gtttggcggt
     7081 gaaataaaac ccgtcaataa agatattgtt gatggattaa tgaagattta cccggaccct
     7141 gtgctaaatc cgggagccag ggaagagctg aatgcggctt ccagcatatg gctgacaaaa
     7201 gcacaatatc agtatctcct cagaatggaa aatactctcc agcctgagtc gaggatatcc
     7261 ctgctcctgg aactggtatc aaatgccgaa catcacggct ttatggagcg ccttgtaaac
     7321 atcccatagc cagtatttcc cggccttcgg gccgggcttt tttcaattca agagaatatt
     7381 ccggagtgaa gcctgcacga agccatcccc accatggact ccccctgtct tttgatggaa
     7441 ccgtgtattt cttaatggcg aaagaaataa aaggcttcac cccagagtat tgattcgttt
     7501 tatcaaaggc cggcccgtgc catcacgtgt ggcggagaga acggataccg gtcttctttt
     7561 catctcacag taggacattc gcatgaccac gacagaacat cccgtgcgcc agttgctctg
     7621 gtgtgcactg aatgccctga aaacggcaca ggaaaaccac aatataacca gtgaaaccgg
     7681 attacggcat tacctgcttg aatggctttc tggtgccagc agacatcctg agttccgtag
     7741 tctccctggc gaaatcatgg cgttaaaagc attgaccgaa aaagatcgca atattcccat
     7801 catcggaacg ctgaatacgc tctttctcag ctctgccact gtcggggaat gtccgttgtt
     7861 tcgttttcgg gctgcactgg gtaaattaca gaaagcaggc tggcgcacat atgtctgccc
     7921 atggcctgag agggtgttca atgaatccat tgaacgggcc tgttccggga aacgtcatct
     7981 gctacaacta agtcgcaccg aagagtgttt tctaccgaca ggcgatatga gggcaccagt
     8041 tacgttgcag ctgatcactc cactacaccg caaaactatg cagcttctgg aagcggcaga
     8101 gttaatattc tccgacgaag gatttcaggt ggtgagagga tacgaacatc aattcgggat
     8161 cgaacgcaga gaaaccctct ttcacacctt atttatcggg ctgcccagcc tgccagaaga
     8221 tgtctggggt gcaacacagg agcagacgac tatcacatta cactgaggaa gagcaataca
     8281 tgaaactcca atatcgtatt ccattagcta tatatagcgt ctggtgcatt atagcgattt
     8341 tgctctgcaa ggatggcttg taccagatga acatatggac gctagtagag atattgggga
     8401 tgatagctct cccgctgtta gtccgtccgt ttttcattct gcttagaata atatttagga
     8461 aaaatagttt taaaaccaaa gacatgtctg acaatcacac agtatgtgtt ttcctgagcg
     8521 cactcgcaga tacttcctca aagaaggcga taaaaaaaca cttcaagcaa ttactcgaaa
     8581 agctgccccc cttattacgc cagaagaaac gtatctacat gaaatcccat cttctgactg
     8641 aagccaggac acaaaagctg atttgctctc tgcgccgaaa agggctggat gtaacagcgg
     8701 aacgaaggga atccgccatg aatagcgtca tgttccgcat cctcatcgtc agcagaatct
     8761 tatctcagtg gaaagtgcct cacataaatc cccgctgtgg tattgtcatt ctgaccctga
     8821 aaaacgattc tggaaacagg gaataacagt tataagagca ccacgatttc cgacaggaaa
     8881 acatacatga aaatcaacgt agatgaccct ggcaaaaaga gcttcgctct cattacgcct
     8941 cacgtgcgtt aattcccgac acaccccgtg acccgtcttc gcagcctgta ccaccctttc
     9001 tgccgttccc gggattcttt ctgtcactac tcgcttgtgc cgttttttcg caaccggtac
     9061 gtgcagttac gacggtacag ctgcttcttt tcccgttccg aaaggagtct ttgatgccac
     9121 agcaacatcc cggacgacta caggtactgg tcgtcgacac gcactgcaaa cgcaagctgt
     9181 tttcaacgaa aacacagaca gatcccgatg agcttgcccg acgcttctgc acgccggata
     9241 actgccttgt ggtggtacta tgcaacaacc gatttctgtt ccgcctggaa cgtgcacccg
     9301 gtagccactg ccgctggcgc aagggtagcc gctcccgcca tcagcacctg caggactggc
     9361 tgtcgtaaaa acaacaaaaa caaaagacct cgtcaaaaca ggaggggacc atgtcgtttt
     9421 tatttaaatt aaccatcgcg attttgattg tctttgcaat cctttttccg attttaattt
     9481 catcagataa caaactgtcc gcactttttt ggaagatacc aaaagatttc tgggttttcc
     9541 tgattatcat gtacggggca atcatcacgg tggtgttcat agaaagcagt gaacaggcac
     9601 gcatccgccg ccaacaatat ttgcaacagt acaaaatgcc aaatgagata catgaaaatg
     9661 tggtgataga aaacagtatt atttcaagag aaacaacaga tgacgaatct gacattaaca
     9721 ccctgtacct tgattcattt aaaagtaaaa acaactgcaa atcttttgaa accaattcaa
     9781 atttactgga taaaaatggt aagcctgtgg aaataatggt gtgtgatgtt caggaactgc
     9841 attttttcgt tccaaagaat taaacagtta atccccctta ctctgttatc ttagtcgccg
     9901 gcatcaacta acatgaaaaa taataacgta ccattatatc tatggttact ttggtgtacg
     9961 ttttgcctgt acatcactac cccgtggcaa tacttccgtt atctatacac tgaccacata
    10021 tcactatctt atatattata tttctgtata gtggttatta tctgcttttc cccactactt
    10081 ttcagatgcg tgcttcttat cgtaaggtct gtatctaaat acaacttcac attctttgcg
    10141 aaaaaaaatg gcagtaaaga atcaagcata catcttagcc cctatgccga tacacgttgc
    10201 ccggagtcaa tgaggaaaca ctgggatgtg ttactttctc tgatatcaaa agcaattaat
    10261 aatgatgaaa ccattgttat gcattcacat ctctttactc ctgcaagaat aaataaactt
    10321 ataaagagac tggaatctta tggtttgaat ttctctgtta ttacatgccc acggaaaaca
    10381 agtctgtatg aaagattatc aattcctttt gtatatctct tatttcagtg gtctctcccg
    10441 catttgcatt cggacggaat gacagtcgtc attcgtcctc tccagccgcc tcacaccaat
    10501 taacaaacac gtatatacga acacggagtc tccgttatga aaaaaaacta tctgacactt
    10561 atactgccgt cattattgtc cggctgtgcc ggaatttccg gcagcaataa cgtggcacca
    10621 tcagatacgc ctgctctggt ttttgttgac ggacaaatca gtgagagtgc tggcgttctg
    10681 gcacttacgc aacaacgtct ttctccacct aaaataactc cccccccgag agtcagcgtg
    10741 ccagagacag taaaaacagc acatccagtc agcgaatccc gaccgttacc ttcaccaaca
    10801 ataagtcaga atttctcccg gttaatcatt acaggcaagc ctggtagcgc ccctgtaaca
    10861 ctatcgccga cggcccgtaa ccggaccgtc agtcagtgga taaaaacatt actaccggaa
    10921 ggatggaaat tcagacaaga gaatgcagcc acgcccaagc tgaataccaa actggtttca
    10981 tggtctgcca atgatcagtg gacccgttct ctgaatcggt tgctggaaga acaacaccta
    11041 tggggccatc tggactggga taataaaacg ttgaccgtca caacatcagc tgctgcaccg
    11101 gcacaggaca cggcaaccac tatctcgcca gcagccatgg taaccacatc cacttcccct
    11161 gaatctccaa caacagcaaa tagccagaac aaaccacgaa atccattcag aggaaacagc
    11221 gtatcttcgt caacccccgc cgccaccccg actccaaccg gctccacagt caagtctatc
    11281 ccgctcatga ccggaacgcc tgttaaaccg gtatctcagg gtaaagagtg gcgtgcgccg
    11341 gcaggcacca cattaagaga gaacattatc aagtgggcag aagaaacaaa atgcgaaagc
    11401 atggcatcaa cgcactggat ggtcatatgg ccactttctg taaccgatta ccgtctggat
    11461 gcgcctttaa tgttccgggg atcatttgaa tcagccatgg agcaggtatt tgagttatat
    11521 cggactgcgc aaaaaccttt atacgcacag gcttctcgca tgcagtgcat cattacagtt
    11581 tctgatacaa gggatggtcg ctaatgggat ggctggtcat ggccgtcggc ctgaccattc
    11641 tgattatcac tggtagctac cagaatcaga agatgtctga aaccacaaac gcccagcaat
    11701 atgcaagtgc gtctgtatgg gcaagtcaga tactgatgat tgctaacaga atcaatgata
    11761 tcagatacgt atcaggccag caggacggag taatttcctc agataaactg gctctccctg
    11821 tcactccgga ctcccgaatt aaacatcagt tacaacaggg gcgtctgtgg gtatggatgc
    11881 ctgaacaacc aggtcttgtt gaaactttgc gttcaaaaag tcgtggttct gcactaatag
    11941 ggatcttcca aaacgggcaa ctcacctggc tatcaggaac tgcaaccggt ctgacacccc
    12001 cggcaggcat tactgctggt tctgtcgtct acgttaacta atctggatat attcatgaaa
    12061 aaatcacacc agcgttcaat gaagctggcg gtgctcccct gcatgatcgc cgtcgctctt
    12121 tccatctccg gatgtacttt cagcgaaatc aacaaaatgc agaaaaaagc acaggaagac
    12181 tcagcacatg cacgggaaaa ggtatcagcc ctttcggccc gtaaatcgca ggctcttacc
    12241 tggctcgata atcaatggat aaaccctgtt ccggtcgctc aggtatcaag agagaaaaaa
    12301 caaacagctc cggcctgcta catcacgcag gcaagaaaag gagagatcac tctgcaggaa
    12361 ctggggcaac gtattactgc cgtatgcggc atccctgtga tcatcacgcc tgacgcagcc
    12421 aattcaactc ttgaaggagg cgctacccgc cagatgacag gaacactacc agcaccagat
    12481 gaaaatgggc gtctaccgtt aagcagcctg ggcagcacaa caatgactac ctccactcag
    12541 ccattaacgc tgaataacct catgtggcag ggagatatca atggtcttct ggatctgatg
    12601 gccagccgga gtggtctgta ctggcgcatg gataatggtc ggattgtatt ctatctgact
    12661 gaaaccagaa cgtatccact tcatatgctg aacaccaaaa ccagcagcag ttccagtgtc
    12721 agctctggct caacaagcac aatgggggca acaggaggcc aggataactc agcatccggt
    12781 gatgcaacgt cctctcagag cacaaccgtt ggtcaggaat acgatctgta tgaagacatc
    12841 cggaaaacta ttgaagcaat gctgacacca gaaaaaggcc gttactggtt atctgcatcg
    12901 agctcaacgc tgactgtcac tgatactcca gctgtccagg aagccgtcgc acgatatgtg
    12961 gacgaacaaa acagtattat gaaccgccag gtagccctga acgtacaggt tctgagcgtc
    13021 agcaatacca gaaacgaaca gttcggtctg gactggaacc ttgtttataa atcgctacat
    13081 tccgccggag caacgttgaa caatgcaagc ggagatttta caggcgctac atctgcaggc
    13141 gtatcaattc tggatacggc aacagggaat gccgccaaat tcagcggttc cagtcttctg
    13201 attaaagcgc tgagtgaaca gggcgatgtc agtgttgtga cttcacaaga aagcactgtc
    13261 acaaacctga cgccggtacc tatccagatg gcagatcaga cggtttacgt cgcccagtca
    13321 gcaacaacaa cgactacgga tgtaggagca acaacaacat taacgccggg catgatcacc
    13381 accggattca atatgaccct gctgccttta attcagaaaa cgggcaatct ccagttgcag
    13441 atgaatttta atctgtcaga tcccccaaca atccgtagct ttacgtcaaa agacggaaac
    13501 agttacatcg aaatgccgta taccaaactg cgttcactga gccagaaggt caatctgaaa
    13561 gaagggcaat cacttgtcgt tactggtttc gatcagaaca atacgacgac aagtaaagcc
    13621 ggtacgttta cgccagcaaa tccattattt ggtggttcac aaaccgggaa aaatgaacgc
    13681 agcacgcttg taatcatcat taccccgact ttcccgtcag gaggcaacaa tggctgatga
    13741 agatatcaac ccggttgtac ttctcgcaga tcctaaagta aatcatcgcg tgtgggcagc
    13801 ctgtcttaaa tggagtcctg tcgtaaaaaa acagcgagtc ccttctcatc agaaacacaa
    13861 gccccatgta aaatccagac ggcttacctc tctgaaagtg actgtaggca gcagaagttc
    13921 ccgtgggaag atcagccgca ttaccggcac aggaatactg gccaggccgg agcgcaatca
    13981 ttatttttcc cttgctctgg ctttctgctc atgggtgaga aatggatacg gcgtcttccg
    14041 gtacagcgat aaggagcttt tattccttgc ctccattaat ggccagcctg ccgttatggc
    14101 tgatctgtca ggaaatgatg ctgatgttgc tcaaaaggtc agtctttttc tgacgatgaa
    14161 cgaagagccc cccgaaaaat ggcaggtcgt atctcctctg gaacatcctg ataactggga
    14221 aagtattatt acccggttat catcagcaga tctccgccgt tgcaaactta ctgtcggcaa
    14281 tcgcagcaaa ttcacactgc ctgccgtact ttttttagta gcagccagcg caggcactgt
    14341 attctggatg actcagccag agccggatgt cgtaccgacg cccgaggaga tagctgcacg
    14401 ggcaagattg cagtttaaaa agcccgatcc accgccagaa ctcccgcatc catgggcatc
    14461 acaacctgta atcagtgatt ttctgaaagc ctgcgcggac cttcgaaaac catcaccggt
    14521 cgcgctagaa ggctggaaac ttaccggtgg aacatgtact cccgagacat tcacactgat
    14581 ttacgaacga cagccaggag gaactattga aggctttctg gcaagaagca aagaaatctt
    14641 taatgttatt cctgacttta accttaaaga tggtgcacgc ctggcttctg taacccggcc
    14701 actgccttcc ctgccccgca gggatgaggc agtccctacc ccctcagaac aactgatgcg
    14761 ggtgttcacg tggtttcaga aaaaacagtt aacgccggcc attaatgaaa tagccatacc
    14821 ggaaccatta ccaggtaacg atggtgaacc agcccctgtt cagaaatgga aagaatatca
    14881 gttcagttta tcaacgcctg taaatcctga tgagttgttc cctttatttc aggataccgg
    14941 cgttcgtctg agcaatatcc attttgaatt aaacggcggt actttcagtt attcctcaga
    15001 aggtcatatt tatgcgtcca ggtaaattac tcattattcc atccatattt ttcttctccg
    15061 gtttttcatt tgcaacaaca caacctcttg tcacaatagg agaacttgaa gcacaacaaa
    15121 accggaatat tcttttacag gcaaaagttc agggcgcaca gctacagaaa caactcgaag
    15181 aatcagatgt tacttcatca tctgaaactg tttcaggttt ctctggtgtg actgcctctt
    15241 tgccatcagt ttcagagcag ccgacatcta aaaacagaaa ggaattgccc gttattatgg
    15301 aaataaacgg caaagataaa cgtcttaatg ccgttcttcg catggctgat ggacgtcaga
    15361 caagcgtcac cactggcagc cagcttccag gcacatccgt cacagtgaag tcgatctcat
    15421 tgtctggcgt cacgttaagt gatggcacca cccttacttt ctgagtaacg tgatatggat
    15481 aaatataatc tgaaggatgc tctccttttt atatccaggg gagacaccca tgaaattctt
    15541 atagaaacaa accagcggac aaggcctgac gtacaaagta atctccagga gctgctaaaa
    15601 ttatatccgg atatcaaccc aaaagtagtc tcgttgtcgg agttacagga ggcaggtcag
    15661 gatgagaaaa acagaggccc gaaagaacga attattcatc tgaaagacct tgctgatgtc
    15721 agtgaaagtg agaagaaagt tctatcttat tttgaaactg ccagaaaact tggtgcttca
    15781 gatattcatt tcttaatttc agagtctatt ttcaaagttc gcatgagaat attcggtgaa
    15841 ctgcagactg tagatgaaga tcaaccagca ctgggctatt cactttgcgc aacagccatt
    15901 ctgtcaatgg ctgatgtcac tgaaaccagt ttcttccctc aaagggagca ggatgcgcgc
    15961 ctgtccccac aattaatgcg aaaaatagga atatttggtg cacgctacag tcacagacct
    16021 acgggagacg gtctgattgc agttatgcgc ctgatacccg atgacggaga taaagttccc
    16081 acgtttaaac aactgggctt tatcccggaa caaatccggt tgctgaacat aatgctgcgc
    16141 cgcccggaag gaaaaatagt cctgtcaggt ccaaccggtt ccggtaaatc gacaacgtta
    16201 cgcagcgcct gccgtgtata tcttgacgat aatcaggggc gacacctgct aacaatcgaa
    16261 gatccgctgg aaggacagat actgggagca acacagactc cgattatctg cgacaaatcc
    16321 gacgaagatg ccgtcaaact ggcatggagt cgggctattt catcggcaat gcgacttgac
    16381 cctgatgcca tcatggaagg ggaaatgcgc gatcttatct cgatgatgtc aaccacctac
    16441 gcggcacaga ccgggcacat agttctgacg acattacata caaactcagc tctgggtata
    16501 ccggagcgaa tgattacgat gggtatgaat gccgatctta tttgcgatgc gcaattactg
    16561 attgggatga tcagccagcg ccttgtacca actctgtgtc cctcctgccg tattccatgg
    16621 gaaaagcgag cacctgaact tagcgacgac gagcgtgatt accttgagcg gcactgcaat
    16681 aaagattcac tctgcagtac agataatatc tggttccgaa atcatcacgg atgctctgaa
    16741 tgtaatcacg acgtaatcat taacggcaga aagcgcggtg aaataggtaa aggcctcacc
    16801 ggcaggactg taattgctga ggtgatagaa cctgataacc gcttatttca gattctgaaa
    16861 acacgcggca aagttgcagc acgtaaatac tggctggaaa acatgaaagg catcagtcgt
    16921 gtagagcatc ttcttcgccg tatcaatgaa ggtctggtag accctcttga agccgacaga
    16981 atcatccctc tggacgaaga cgagcgcctc agcatcgatg atgtctaaca ggagaacaac
    17041 atgcgtgaaa tgaatttcag tcaacggctg aggcgtttca ttgtcagaaa aacgttcagc
    17101 gccccctaca gggtgcagtt ttacgaagcc ctgcgttttc tgctggaaaa taaacagcca
    17161 ttaaagaccg cactggaaca gatgcgggat gcctggacag actttggacg aaaatggcat
    17221 ccctttgctg aactggccac agactgcatt gagtctcttc gtgaaaacag tggcgaaaac
    17281 tctctggaat atactcttag tttatgggtt cctcaggaag aggccgcagt aatcagcgcc
    17341 gggataagaa gtggttcaat tgtggatgca ctgcaattcg ccaccactct tacagatgca
    17401 aaagaacaaa tccatcaggc tatatggcaa atggctattt atccggtggg attgttaatc
    17461 atgatgacgg ggacattata tgttctgaat acagagctaa tacctgaact gagcaaaata
    17521 agctcccccg attcatggag tggtgctctt ggttttcttt atggattatc tgtttttgtc
    17581 gataattacg gcgctatatg tgccgttctt tttgcagtga tcacaggttt aatatcatgg
    17641 tctctgccaa actggaaaag ccctgacagt gttcgtactt ttgccgacaa gataatgcca
    17701 tggagtattt atcaggatat acagggagca acatttctcc tgaatatggc tgcacttctg
    17761 aaagccaaaa tgacgacgct caactcgcta aacattcttc aggagtttgc atcaccatgg
    17821 ttaagcacac gtcttgacag cattatttac cgcgtccgcc agggggatca tcttggactg
    17881 gctttgcgtc agtgcggtta tcagttccca tccagggaag cagccaactt cctgtcttta
    17941 ttacagggag atggcgcaac agagctaatc agcaattatg gtcaacgatg gcttagtcaa
    18001 acacttcaac gtgtaaagaa acgggcaaac gtgattcgtt taattatgct gatatttctt
    18061 gtcatgtctc tcatgttact ggtttttgcc attatggata ttcagtctat tagtgacaac
    18121 agcatgggta acttttaaac aaaacgagga tatttatgtt agtagaaaat attaatacca
    18181 ctttaactgg aaataataag aagaatgagc ctcatgataa aggatgggca attttggagc
    18241 agggaacaat agcgctcgtt gttctttttg ttatagtcgt tgttctgggt agtttgtatg
    18301 cgttgcgtac aagagccaat gtggcaactg aaaccgcaaa tatacaaaca attatcacaa
    18361 gtgcccagag cctgctaaaa ggtagcgatg gatatacatt taccagcagt gccaaaatga
    18421 caggtgccct cattcagatg ggtgtcattc cctctgggat gaccgtacag ggcgacaaaa
    18481 catctggtac agcaacgctc tataacgcat ggggcggtgc tgtaactgtt gccccggctt
    18541 caacatcagg gttcaacaac ggttttaccg ttacctatga taaagtccca caggatgcct
    18601 gtatccagat tgccacacga atcagtaaaa ctggtttaac taacggcatt accctgaaca
    18661 gtactgctca cagtgatgga aaagtcacta ctgaagaagc cagtacgcaa tgcaaggcag
    18721 ataatggcag cactggtaca aacaaactta tcttcaccat caatggttaa ggagttttaa
    18781 tgtcaggggg tacagtaccc ctcagactta tttcattaat cctgcttttt tctcttattc
    18841 cacccgcccg agcttcatac gtagctccca aacagatctg gaccaacaag tgggacaatt
    18901 gctttgccgc tgccggcgcg cgctatcaaa ttgaaccatt attattgaag gctatttctg
    18961 ccggggaatc ttcgttgagg ccgggcgcaa ttaatataaa taaggacaaa aaaacaggta
    19021 aagccagtag cacggattat gggttgatgc aaataaactc aacccatatt ccaaagctga
    19081 taaatatggg cgtaataaaa aagtctgagg atttaattac caaaccatgc cttaatatcc
    19141 atataggaag ctggatactg gcaagacatt ttcagatatg tggcgtcagc tggaattgcc
    19201 ttgggtcata caatgccgga ttccgtaagg acagacatga aacaagagag caatatgcca
    19261 ataaaatatg gagaatttat cgtgacatga aagggatatg tcttcccgga cagggaggca
    19321 ggcaatgcag acaatcgtag gcataagtct atcccctgtt tatatactgc cattgatgtt
    19381 cacattttcc attattggac gaactctgct attcagagtt cgttattttt tatctgatac
    19441 gggacatctc tggtataaga cacaccctgc tgttctgtca ggaatatggc tatacagtat
    19501 agctgtggcg ttaattattt tatcatcatc accactgctc taccgtattc atgctgtcct
    19561 tattctttcg ttcatactgc aaatggcggt aacggatgca ctgacaggtt tattaccagg
    19621 aacattcacc cgacgttttt taattgcagg aatgctatca caaatcacga ctgatatatg
    19681 gtggttccgt acaacagaat ttgccactgc tgcaattgtc ttattctgcc ttcataaatt
    19741 agttaaccgc catcgtctta atattggcac tggagacctg tggcttattg caggtattac
    19801 cgcatggtca gggttatata acgccatatg gtgtgtgttg ctgggcacag gaggatttgt
    19861 cttatggcat tcaacatggt gcataaaagg gcataaagaa ggccctctgg gtccatggct
    19921 atgttttggc catgtccttt tgctgctgga taatctttat caaccactat gggtaatctg
    19981 atgaaaaaat atgaccgagg ctgggcatcg ctggaaactg gcgcggcttt actgattgtt
    20041 atgctcctga ttgcctgggg agcgggcata tggcaggact atattcaaac aaaaggatgg
    20101 caaactgaag cacgtcttgt cagcaactgg accagtgcgg cccgctctta tatagggaaa
    20161 aactacacga ctctccaggg cagtagtacc acaacaactc ctgccgttat cacgacaacc
    20221 atgctgaaaa ataccggctt tttgtccagc gggtttactg agacaaacag cgaggggcag
    20281 cggttacagg catatgtggt tcgaaacgcc caaaacccgg aattactaca ggcaatggtt
    20341 gtatccagtg gtggcacacc ttatccagtg aaagcactta tccagatggc taaggatatt
    20401 accgctggtc ttggtggata tatccaggac ggcaaaacag ccacaggtgc attacgttcc
    20461 tggtcagtag ctttaagtaa ttatggtgcc aaaagcggta acgggcatat tgccgtattg
    20521 ttatcgacag atgaacttag tggtgcagct gaggacactg atcgtcttta cagattccag
    20581 gtcaatggtc gccctgactt aaacaaaatg cacacggcca ttgatatggg atcaaataac
    20641 ctgaataacg ttggggcag
//
LOCUS       DADMIB010000066        20656 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.066, whole genome shotgun sequence.
ACCESSION   DADMIB010000066 DADMIB010000000
VERSION     DADMIB010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20656
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.066"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..876
                     /locus_tag="JNZ89_002234"
     CDS             <1..876
                     /locus_tag="JNZ89_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8936106.1"
                     /translation="DQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQ
                     YGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKG
                     FSEQDEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTN
                     IINGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAED
                     GGFTLEINGSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQP
                     KLRGNVQTAQREVAP"
     gene            873..1238
                     /locus_tag="JNZ89_002235"
     CDS             873..1238
                     /locus_tag="JNZ89_002235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HAY8936107.1"
                     /translation="MRNRLIAAILGLFGTLTGVQAAPDVTSEITYDLASGRADYYFWK
                     DEASAGNNGYMWYECSYPDLQQTCTANGNISTVQIYLTEQRSGMRWPVKLKGFKTAIV
                     SSDEAPLGCKGGQRASDES"
     gene            1330..1962
                     /locus_tag="JNZ89_002236"
     CDS             1330..1962
                     /locus_tag="JNZ89_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein CblD"
                     /protein_id="HAY8936108.1"
                     /translation="MKNLPIGGVWKGKVKLHSNSPAQDYFANITLNTLDPNHIDVFFP
                     EFAHATPRVQLDLHPTGSVNGSNYAQDLTMLDMCLYDGFNGNAISYEIMLKDEGRPAA
                     GRRDGDFSIYRQGGTSTDEGERIDYRVKMYNPETGGQIDVRNNENMVWNSINLKSVRP
                     VVLPGIRYAVMCVPTPLALAVDKFSVMDKQAGYYMGKLSVIFTPSLPTIN"
     gene            complement(2050..3348)
                     /locus_tag="JNZ89_002237"
     CDS             complement(2050..3348)
                     /locus_tag="JNZ89_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708898.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8936109.1"
                     /translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNIST
                     QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSRGGLA
                     IARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM
                     HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKM
                     SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFA
                     DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI
                     GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFSLVVGALADTIGFSP
                     LFAVLAVFDLLGALVIWTVLQNKPAIEVAQESHNDPAPQH"
     gene            3831..5243
                     /gene="uxaC"
                     /locus_tag="JNZ89_002238"
     CDS             3831..5243
                     /gene="uxaC"
                     /locus_tag="JNZ89_002238"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HAY8936110.1"
                     /translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED
                     YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH
                     WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP
                     IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL
                     QTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFK
                     TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL
                     SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER
                     QMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG
                     EMVKNICFNNARDYFAIELN"
     gene            5258..6745
                     /locus_tag="JNZ89_002239"
                     /pseudo
     CDS             5258..6745
                     /locus_tag="JNZ89_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199350.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase"
     gene            6828..7379
                     /locus_tag="JNZ89_002240"
     CDS             6828..7379
                     /locus_tag="JNZ89_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HAY8936111.1"
                     /translation="MTAYWLAQGVGFIAFLIGITTFFNRDDRRFKKQLSVYSAVIGVH
                     FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG
                     TIVSTRALFRCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW
                     RMQKRGIDPFKVEKTPPAVDERG"
     gene            complement(7384..8628)
                     /gene="sstT"
                     /locus_tag="JNZ89_002241"
     CDS             complement(7384..8628)
                     /gene="sstT"
                     /locus_tag="JNZ89_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HAY8936112.1"
                     /translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG
                     LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
                     SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG
                     FALRHGNETTKNLVNDLSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQL
                     LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA
                     LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA
                     SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD
                     VLFTAAACQAEDDRLANSALRN"
     gene            complement(9244..10209)
                     /gene="alx"
                     /locus_tag="JNZ89_002242"
     CDS             complement(9244..10209)
                     /gene="alx"
                     /locus_tag="JNZ89_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001098790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family membrane protein Alx"
                     /protein_id="HAY8936113.1"
                     /translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW
                     SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
                     YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL
                     AHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI
                     FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI
                     GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINARVNYRHDKQRGE"
     gene            complement(10492..11496)
                     /locus_tag="JNZ89_002243"
     CDS             complement(10492..11496)
                     /locus_tag="JNZ89_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HAY8936114.1"
                     /translation="MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQ
                     AQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPL
                     ASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSS
                     RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAH
                     GVVVMDYGDFSVTLLHSKVSDSVLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDL
                     TQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
                     "
     gene            complement(11557..12240)
                     /locus_tag="JNZ89_002244"
     CDS             complement(11557..12240)
                     /locus_tag="JNZ89_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vancomycin high temperature exclusion protein"
                     /protein_id="HAY8936115.1"
                     /translation="MQPRLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQL
                     TWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDE
                     ASGMQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
                     AKQYSIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHSQPKYLGPSVMIGPF
                     SEHGCPAKE"
     gene            complement(12317..12820)
                     /locus_tag="JNZ89_002245"
     CDS             complement(12317..12820)
                     /locus_tag="JNZ89_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HAY8936116.1"
                     /translation="MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATD
                     KALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
                     VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQL
                     SLGQDKI"
     gene            12905..14041
                     /gene="rlmG"
                     /locus_tag="JNZ89_002246"
     CDS             12905..14041
                     /gene="rlmG"
                     /locus_tag="JNZ89_002246"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(1835)-N(2))-methyltransferase
                     RlmG"
                     /protein_id="HAY8936117.1"
                     /translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI
                     RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD
                     YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKVLG
                     PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR
                     FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM
                     PEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING
                     ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR"
     gene            14326..14640
                     /locus_tag="JNZ89_002247"
     CDS             14326..14640
                     /locus_tag="JNZ89_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mRNA interferase HigB"
                     /protein_id="HAY8936118.1"
                     /translation="MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAV
                     FPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKG
                     KK"
     gene            14637..15053
                     /gene="higA"
                     /locus_tag="JNZ89_002248"
     CDS             14637..15053
                     /gene="higA"
                     /locus_tag="JNZ89_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HigA"
                     /protein_id="HAY8936119.1"
                     /translation="MIAIADILQAGEKLTAVVPFLAGIQNEEQYTQALELVDHLLLND
                     PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLADLPEIG
                     SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID"
     gene            complement(15098..17116)
                     /locus_tag="JNZ89_002249"
     CDS             complement(15098..17116)
                     /locus_tag="JNZ89_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HAY8936120.1"
                     /translation="MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFY
                     AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI
                     LHTGRYSYQPHLVAPSALQAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVE
                     VMGSEGYLINEFLTLHTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSM
                     LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKL
                     KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINT
                     CIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAIN
                     AAARGHQVTLFDAHSESGGQFNIAKQIPGKEEFYETLRYYHRMIEVTGVTLKLNHTVT
                     ADQLQAFDETILASGIVPRVPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF
                     DTAMYLSQPGESTSQNIARFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS
                     KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVIC
                     AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELNARRAIAQGTRLALEI"
     gene            complement(17542..19893)
                     /gene="ygjK"
                     /locus_tag="JNZ89_002250"
                     /pseudo
     CDS             complement(17542..19893)
                     /gene="ygjK"
                     /locus_tag="JNZ89_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417551.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
     gene            complement(19910..20656)
                     /gene="ygjJ"
                     /locus_tag="JNZ89_002251"
                     /pseudo
     CDS             complement(19910..20656)
                     /gene="ygjJ"
                     /locus_tag="JNZ89_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417550.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgjJ"
BASE COUNT         5034 a         5414 c         5431 g         4777 t
ORIGIN      
        1 gatcaaacgt catggcagtt atcgcatacc ttttataatg attcattcag ccataaagaa
       61 cttggcgtaa ccgtcggagg cctgaacacc gataccataa acagcgcggt taacgggcgt
      121 tgggatgggc aatacggaaa tgtctacgct accgtatctg atagttatga ccgtaagaat
      181 catgatcatc tttcggcctt tacgggcact tatagctcta cgctggctgt cagtcgctat
      241 ggcgttaatt tgggagccag tggtacagac gatttgctgg gtgcggtatt ggtggatgtg
      301 aaaggcttct ctgaacagga tgaagagagt caggatctgc aactcgaagc gcgggtggca
      361 ggcagccgaa ctttgcagct tggtcaaagc gacagtgtgt tgttccctta tcctggattt
      421 cagtctggtt ttgttgaggt taacgacagt agccagggca atcagcaggg gacaacaaac
      481 atcattaacg gtgcagggaa tcgtgaatta atgttgttgc ctggcaagct gcgctatcgc
      541 gaagtgtctg ccagctttaa ctacaactat atcggtcgtt tattactgcc ggcagcggtg
      601 aaaaaattcc cgattgtggg gctgaacagc gccatgttac tggtagctga agatggcgga
      661 tttacacttg aaattaacgg cagcgaaaaa gagctctatc tgctttccgg gcagcaattc
      721 cttaagtgtc cactgagtgt tgaaaagaaa cgcgccagca ttcgttacag cggagatgtt
      781 acttgtagtg tggtgactta ttcacaatta ccggagttga aacagcctaa attacgtgga
      841 aacgttcaga cggcgcaaag ggaggttgca ccatgagaaa tcgattgatt gcggcgatat
      901 tgggcttgtt tggcacgctc actggcgttc aggcagctcc tgacgtgacc agtgaaatta
      961 cgtatgattt ggcatctggt agagcggatt attacttctg gaaggatgaa gcgtcggcag
     1021 gaaataatgg atatatgtgg tatgaatgtt cgtatcctga cctccaacaa acctgtacag
     1081 ctaatggaaa tatatcgaca gtacaaatct atttaactga acaacgcagt gggatgcgtt
     1141 ggccggtaaa actcaaagga tttaaaacag ccattgtaag tagcgatgaa gcgccgctag
     1201 gatgcaaggg ggggcaaagg gcttcagacg aatcttaagg attctaatag atcttcatgt
     1261 acagaagatg gtcaacatta ttatatatac gatacaaagt ttcttacgct ctaccttgag
     1321 cagacagaga tgaagaattt gccgattggt ggcgtctgga aggggaaagt taaattacat
     1381 tcgaacagcc cggcccagga ctatttcgca aatattaccc tgaatacgct cgaccccaac
     1441 catattgacg tgttcttccc ggagttcgcc cacgccacgc cgagggtgca gttagacttg
     1501 catccaacag gaagcgttaa cggcagcaac tacgcgcaag atctgaccat gttggacatg
     1561 tgcctgtacg atggttttaa cggtaatgcc atcagttatg aaatcatgct caaagatgaa
     1621 gggcgaccag ctgcagggcg cagagacggt gacttctcta tctatcgtca gggaggaacc
     1681 tctaccgacg agggagaacg cattgattac cgggtcaaaa tgtacaaccc ggaaaccggt
     1741 gggcaaattg atgtgcgcaa taatgaaaat atggtctgga acagcattaa cctgaaaagt
     1801 gtgcgtccgg tggtactgcc cggtattcgc tatgccgtga tgtgtgtgcc gacacccttg
     1861 gctctggcag tcgataaatt cagcgtgatg gataaacagg ccgggtacta catgggcaaa
     1921 ttgtcagtaa tctttacgcc ttccttgcca accatcaatt aaccctgcaa agcggacaaa
     1981 cgcttttttc tatataaacg acgaagccgc ctgataaggc ggcttcgtcg ttataactta
     2041 cgttaaacgt taatgttgcg gtgcgggatc gttatgtgat tcctgcgcta cctcaatcgc
     2101 cggtttgttc tgcaacacgg tccagataac cagcgcacct aacaggtcga acactgccag
     2161 tactgcgaac agcgggctga agccgatggt gtcagccagt gcaccgacaa ccagcgaaaa
     2221 cagcgtactt gccagccatg cggacatccc ggttaaaccg ttcgccgtcg ccacttcgtt
     2281 acgaccgaac acgtcagaag agagcgtaat cagcgcgcca gacagtgcct ggtgagcaaa
     2341 accaccgata cacagcagca taattgcgac atacgggttg gtgaacaggc cgatcatacc
     2401 cgggccaatc atcagcactg cacccagcgt tacgaccatc ttacgggaaa cgatcaggtt
     2461 cacaccaaac caacgctgga acagcggcgg caggtaacca ccgaggatac aaccgaggtc
     2521 agcaaacagc atcggcatcc aggcgaacat cgcgatctct ttcaggttaa agccgtaaac
     2581 tttaaacatg aacagcggga tccacgcgtt aaaagtaccc caggctggtt ctgccaggaa
     2641 acgcggcagc gcgatacccc agaactgacg gttacgcagg atctgaccaa cggacatttt
     2701 cttcgccgtg ctcacctggt gctgggcttc ctgaccatta ataatatagt cgcgttcttc
     2761 atcggtcaga tgcttctggt cgcgcggatg tttatagaaa atcagccatg ccatcgccca
     2821 gataaagctc aatgcaccgg agatgataaa tgccatctgc cagctgtgca ttacgattgc
     2881 ccataccacc agcggcggcg caatcatcgc accaatcgaa gaacctacgt taaagtaacc
     2941 taccgcgatg gaacgctctt tcgccgggaa ccattcggag ctggctttca gacccgccgg
     3001 gatcatcgct gcttccgcgg caccgactgc accacgagca atcgccaggc cacccctgct
     3061 accagccagc gcggttgcac cacagaatac ggcccacagt acagcaaaca ttgcataacc
     3121 gattttcgta cccagcacat ccagtacata gcccgctacc ggttgcatga ccgtataagc
     3181 agcagaatag gctgcgatga tataggaata ctgttgggtg gagatgttta actcttccat
     3241 cagagttggc gcagctgccg ccacagtgtt acgcgtcagg taaccaagca cggtgccaag
     3301 cgtcaccagt gcgatcatat accaacgtaa ccctttaatt ttacgcatgt aaaacctcat
     3361 cgttttgtta tatccgcagg aagcgcggcc atcatcccgc cagaggctga agatgttagt
     3421 tacgaccggg taaccgaaaa aaaaccggca cgccccgaac gttgccatga aagtttcgtg
     3481 ctaattcggc ttccgtaccg gttaacccga ttcatctaac aaatgaatga atcggcaatt
     3541 tgcattccgt cgacttatga tttgcgacgg cagaaagatg acttgtcata caactttaaa
     3601 aggtgagagc catcataaat gtgcgaatat ttgtagggac attacctgac gacagcgagg
     3661 ccagtactgg cgcggcctgc agcgagattt accactttga gagtaatttt tttaactacg
     3721 tttattgatc taactcacga aaatatcttc ggactctgga aattggtgtg ataactttgt
     3781 cagcatcgca ccataagcaa gctagctcac tcgttgagag gaagacgaaa atgactccgt
     3841 ttatgactga agatttcctg ttagataccg aatttgcccg ccgtctgtat cacgactacg
     3901 caaaagacca gccgattttc gattaccatt gccatttgcc gccgcagcag attgcggaag
     3961 actatcgttt taaaaacctg tatgacatct ggctgaaagg cgatcactac aaatggcgcg
     4021 ctatgcgtac caacggtgtg gccgagcgtc tgtgtaccgg tgatgcgtct gaccgtgaaa
     4081 aatttgacgc ctgggcggcg actgttccgc acactatcgg caacccgtta taccactgga
     4141 cgcacctcga actgcgtcgt ccgtttggta tcactggcaa attgctttct ccgtcaactg
     4201 ccgatgaaat ctggaacgaa tgtaacgaac tgctggcgca ggataacttc tccgcgcgcg
     4261 gcatcatgca gcagatgaac gtgaaaatgg tcggcaccac cgatgacccg atcgattctc
     4321 tggagcatca cgcagagatc gccaaagacg gctctttcac catcaaagtg ctgccgagct
     4381 ggcgtccgga caaagccttc aacatcgaac aggcgacctt taacgactac atggcgaagc
     4441 tgggcgaagt ttccgatacc gacattcgcc gctttgctga cctgcaaact gccttgacca
     4501 aacgtctgga tcacttcgcc gctcacggct gtaaagtgtc tgaccatgcg ctggacgtgg
     4561 tgatgtttgc tgaagcgaac gaagcggaac tggacagcat tctggcgcgc cgtctggctg
     4621 gcgaaaccct gagcgagcac gaagtggcac agttcaaaac tgcggtactg gtgttccttg
     4681 gtgccgaata tgcacgtcgc ggctgggtac agcagtacca cattggcgcg ctgcgtaata
     4741 acaacctgcg tcagttcaaa ctgctggggc cggatgtagg ctttgactcc atcaacgacc
     4801 gtccgatggc agaagagttg tctaagctgc tgagcaagca gaacgaagaa aacctgctgc
     4861 cgaaaaccat tctgtactgc ctgaacccgc gcgataacga agtgttgggc accatgatcg
     4921 gtaacttcca gggcgaaggt atgccgggca aaatgcagtt cggttccggc tggtggttta
     4981 acgatcagaa agacggtatg gaacgtcaga tgacccaact ggcgcagctc ggtttgctga
     5041 gccgctttgt cggtatgctg actgacagcc gtagcttcct gtcatacacc cgtcacgaat
     5101 acttccgccg cattctgtgc cagatgatcg gtcgctgggt ggaagcgggc gaagcaccgg
     5161 cggacatcaa cctgctgggc gagatggtga aaaatatttg ctttaacaat gcgcgtgact
     5221 acttcgccat tgaactgaac taaggtctgg ggttgatatg caatacatca agatccatgc
     5281 gctggataac gtcgcggtcg ctttagcgga tttggctgaa ggcacagaag tcagtgtcga
     5341 taaccagact gttacgctgc gccaggatgt tgctcgtgga cataaatttg cgttaacgga
     5401 tatcgcaaaa ggggccaatg tcatcaaata tggcctgccg attggttatg cattggcgga
     5461 tattgcggcg ggggaacacg tccacgccca caatacgcgc acgaatctga gcgatctgga
     5521 tcagtatcgc tatcaacctg attttcagga tctgcctgcg caagcggcag atcgtgaagt
     5581 gcagatctat cgtcgcgcta acggcgatgt cggggtgcgt aacgagctgt ggatcctgcc
     5641 aaccgtgggc tgtgtcaacg gcatcgcgcg gcagatccag aaccgttttc tgaaagagac
     5701 caacaacgct gaaggtaccg acggcgtgtt cctcttcagc cacacctacg gctgctcaca
     5761 gctgggcgac gatcacatta atacccgcac catgctgcaa aacatggtgc gccacccgaa
     5821 cgcaggcgca gtgctggtga ttggtctggg ctgtgaaaac aactaggttg ccgcattccg
     5881 tgaaacgctg ggcgatatcg atcctgaacg cgttcatttc atgatctgcc aacagcagga
     5941 tgatgagatc gaagccggga tcgagcattt gcatcagctg tataacgtga tgcgcaacga
     6001 taaacgcgag ccaggcaaac tcagcgaact gaagtttggt ctggagtgcg gtggttctga
     6061 cggtctttct ggtattactg ctaacccgat gctggggcgt ttctctgact acgtgattgc
     6121 taacggcggt actaccgtac tgaccgaagt gccggagatg tttggcgcag agcagttgct
     6181 gatggaccat tgccgcgacg aagcaacgtt tgaaaaactg gtcaccatgg tcaacgactt
     6241 taaacagtac tttattgccc atgatcagcc gatctacgaa aacccatcac cggggaacaa
     6301 agcgggcggt atcaccacgc tggaagacaa atcacttggc tgtacccaga aagcgggttc
     6361 cagtgtcgtg gttgacgtgc tgcgttacgg cgagcgtctg aaaacgccag ggctgaactt
     6421 gttaagtgcg ccgggtaacg atgccgtagc gaccagcgcc ctggcgggtg cgggctgcca
     6481 tatggtgctg ttcagtactg gtcgcggcac gccatacggt ggatttgtgc cgacggtgaa
     6541 aatcgccacc aacagtgaac tggcggcgaa gaaaaaacac tggctcgact ttgacgcggg
     6601 tcagctgatc cacggtaaag cgatgccgca gttgctggaa gaatttatcg acaccatcgt
     6661 tgagtttgcc aacggtaaac aaacctgcaa cgagcgtaac gacttccgcg aactggcgat
     6721 cttcaaaagc ggcgtaacgc tataaagtcg aaatgagttg ttaataaaaa acggcgtttc
     6781 ataatgtgaa gcgccgtttg cttttccata cctgataagg atttatcatg accgcgtatt
     6841 ggctggccca gggcgtgggt ttcatcgcct ttctgattgg tatcacaaca tttttcaatc
     6901 gtgacgaccg tcgcttcaaa aagcagcttt cggtctatag cgccgttatt ggcgtacatt
     6961 tttttcttct gggcacctat cccgctggtg ccagtgccat ccttaatgcc attcgtacat
     7021 tgattacctt acgcacgcgc agcttatggg taatggcgat ttttattgtg ctgactggcg
     7081 gaattggcct cgcgaagttc catcatcctg tcgaactatt gccggttatc ggtacgattg
     7141 tcagtaccag ggcgctgttc cgctgtaaag ggctcaccat gcgctgcgtg atgtggtttt
     7201 caacgtgttg ctgggtgatt cacaacttct gggcggggtc gataggcggc acaatgattg
     7261 agggtagttt tctgcttatg aatggcttga atatcattcg tttctggcgg atgcagaaaa
     7321 ggggaattga tccgtttaaa gtagagaaaa cccctcccgc cgtagacgaa aggggttaaa
     7381 caattaatta cgcagggcgc tatttgccag acgatcgtct tccgcctggc aagctgccgc
     7441 agtgaacagc acgtcagttg aagagttcag cgcggtttcg caagagtcct gcaatacgcc
     7501 gatgataaag ccgacggcaa ccacctgcat ggcgatatcg ttcgaaatac cgaacatatt
     7561 acaggccagc gggatcagca gcagagaacc ccccgccacg ccggatgcgc cacaggcaca
     7621 cagagaagcc accacgctca acagcagcgc cgtgggcaga tcgaccggga tacccagcgt
     7681 attaaccgca gccagcgtca acacggtaat ggtgattgct gcgcccgcca tattgatggt
     7741 ggcacccagc ggaatagaaa cggaataggt atcgcgatcc agattcagct tttcacacag
     7801 tgccatattc accggaatgt tcgccgcaga gctgcgggtg aagaaggcat acacgccgct
     7861 ttcgcgcagg cacagcagca ccagcgggaa cgggttacga cgaattttcc accacaccag
     7921 caatgggtta accaccagcg ccaccagtaa catacagcca accagcacga ccagcagttg
     7981 cgcgtagccc cacagtgtgg agaaaccggt ggttgccagg gtagaagaaa ccagaccaaa
     8041 aataccaatc ggtgcgaagc gaatgaccag tttcaccata aaggtgacgg cattcgacag
     8101 atcgttgacc aggtttttgg tggtctcgtt accgtgacgc agtgcgaaac cgaggccaat
     8161 tgcccacacc aggatcccga tgtagttacc tttcagcagc gcgtcgatgg ggttggaaac
     8221 catgctcatt accagcccgc gcatcacttc tacaatgcct gacggtggcg aaatatcacc
     8281 cgcgctactg gataagtgca gggtagaagg gaaggcgaag ctgaaaacga ctgcggccag
     8341 agcagcagag aaggtaccca gcagatagag gaacaaaata gggcggatat tggttttctg
     8401 cccgtgctgg tggttagcaa tagatgccat caccagcatc aacaccagga tgggggcaac
     8461 ggctttcagt gcgccgacga acaaagtacc taacagacca acagcttccg ccgcgggttt
     8521 tgagatccat gccagaagaa tccccagaac aaggccgacc aggatttgtt ttaccaggct
     8581 gccatgagcc agacgccgga atagccccgg tgaacgttgc gtagtcattt ttcgatcctt
     8641 tcattgtgtt gtcgcacatc cctggtgcgt tctgtcgacg catctttcag gatgtaacaa
     8701 agtgtttgca aggtcgagta taaggaaagt tacagcttcg ggaagcgaaa aatgctggat
     8761 tttaaagaga ggtcatattt tgcaacttaa ttgttacatt tgtttgacat aaacagaggg
     8821 aaggactggc tactaaggct gattagataa catatgggca aaactatttg gaatatgaga
     8881 acggttgcgc tcctttaatg tgctatgcca tataaagtca ctggcgcagg gagcgcgcag
     8941 ggggcagcca atcgccgccg ccccctgcac ccccaggctc tggcgaacaa aatcgccgct
     9001 gcgcgattcc ctcagcttat cccttgcggc taccgggtcg ggcgcaaggg aacgtccctg
     9061 taagatgcgc cctcgccgcg catccatgcg cgtcgccccg gcctccaggg aacgcttcgg
     9121 cgattttgac gccaccaaca cccgtgcggt ctttttgtaa agagctacaa gccaattaca
     9181 taattaatag ctcacctttg tctgggatga gttatctcta ggaatggctt aatatacagc
     9241 gaatcattct ccccgctgct tatcatgccg ataattcacc ctggcgttga taataaacgt
     9301 catcaccaga atgccaaaca ccacgcccag cgagacggcg attggaatat ggtagaagtc
     9361 gacaatcagc atcttgatac cgataaacac caggatcacc gccaggccat atttgagcat
     9421 cgagaaacgc tctgctacgc ccgccagcag gaaatacatc gcacgcaggc cgaggatcgc
     9481 aaacaggttt gaggtcagca caatgaacgg gtcagtggtc acggcgaaga tagccggaat
     9541 gctatccacg gcgaaaatca cgtcgctcaa ttccaccaga atcagtacca gcatcagcgg
     9601 tgtggcgtac agcaatccat tcttacgcac aaagaaatgc tcgttgtcga tggtgtcggt
     9661 catgcgcaaa tgaccgcgta gccagcgcac cagcggcttg tcgccaatgc ctgattcatc
     9721 ttcatgggcg agcgccatct tcacgccggt aaacagcagg aaggcaccga agatatacag
     9781 gatccagtcg aactgcgaaa ttagccagct gccagtgaag atcatgatgg tacgcagaac
     9841 aatcgccccg agcacgccat acaccagcac gcggcgttgt aatgccgccg gaacagagaa
     9901 atagctgaac aacatcagcc agacaaagac gttatcgacc gccagcgatt tctcaatcag
     9961 ataacccgtg agaaaggcca gtgcctgtgg atcggcaacg gcgcgacctt cggtttgcac
    10021 cagataccac cagaaagcgg cgttaaacag taacgacagc gtcacccaaa ccagcgacca
    10081 ggccgcagcc tgtttcatgg tcatggcatg tgccccacga cgcccctgca acaacaggtc
    10141 gatagccagc ataatggcga caacaacagc gaatccgccc catagcaacg gcgtgccgac
    10201 agtattcata gaagttcctt acacataaaa aaaacggcca acgtcggaag acgtcagccg
    10261 ctgcttttta tgcatagacc tcgccttccg gcaaggtctc acttacaaca aaaaaggaat
    10321 acgtctgcgt attcctttcg ggttgcccgg tgaccggatg tggtttttca cacatcgtaa
    10381 tgacgatcga ccggcaatga agttactccc ctttgcaggt aacaaagtat gacagccatt
    10441 cagccagtca atggtctgtt acataccttt tacactgttt tactttggca attatagttt
    10501 tacgctatct gccggaaaaa tcaccccagt ctggcggcgg atctcagtca gcagtttggc
    10561 ggtgatgcga ctgaccgcca gccctggatg atccaccaga tgctcatcca ccagggtagc
    10621 aaacagctct gcttcgtaga gcatggtatt aatatgctgc ggctgggtga gatcctgcat
    10681 ctggctgcca cgcggcacga agcacacttt ctggcattca gacagttttt caatcaccag
    10741 cgatcccgct tcgccctgaa tctcgctttc caggacagaa tcactgacct ttgagtgcag
    10801 caacgtaacg ctgaaatcac cgtaatccat caccaccacg ccgtgggcat ctacgccgct
    10861 tgccaacaaa ctggcggttg cctgcacgct tttcggttca ccgaataatg ccaccgccga
    10921 cgccaggcag taaaagccga tatccataat tgaaccgtta gagaatgccg gattaaaggt
    10981 gttgggattc tcaccatcca ggtaacgttg ataccgcgag gaatactggc aatagttgaa
    11041 aaagacttta cgcaatttgc cgactttcgg cagcgcctgg cgcagcaaat gaaagttcgg
    11101 caggctggcg gttttaaatg cctcaaacag caccacctga ttttcccgcg cacaggcaat
    11161 ggcggcatcc acttccgcca gattcgacgc cagtggtttc tcgcaaatca catgaatttt
    11221 atggctaagg aaaagttgtg tctgggaaaa gtgcagggca ttcgggctgg caatatacac
    11281 cgcgtcaatg gcatcgcttt ccgccatcgc ttccagcgag gtaaacagat gctcgacaga
    11341 aaaatcattg gcgaagtgct gggcctgttc aaggctgcgg gaatatacgg cggttaactt
    11401 gtatttaccg ctctcatggg cggcctcgac gaactggcga gtgatccagt tcgtaccaat
    11461 cacagcgaaa cgtatcataa cgcgtggata ctccataaag ggattctgtc gtcaatgtag
    11521 cacgcctttt tcatcttcga cgtgcgcaga tacgcattat tcttttgccg gacagccatg
    11581 ctcactaaac ggcccaatca tgaccgatgg cccgagatat ttcggctggc tatggaggat
    11641 tttggcgtca atcacggcgc tgacacgagc gagtttctct cgcagttgag tataaaaacc
    11701 gtgcttcata ttgaggtcag gcgcgttaaa accgatagcg tcgatgctgt actgttttgc
    11761 cagccagatg gcgcgttggt tatgaaattc ttgcgagata atggtgatat ggttttcacc
    11821 aaaaaccttt ttggcacgca ctaccgaatc cagcgttgag aatccggcat agtcgcagaa
    11881 gatcactttc gccggtacgc ctttagcgat caaagccttc tgcatacctg atgcttcatc
    11941 gtaattttta cgtccgttat cgccacttac cagtagccat ttcacttttc cggcgtggta
    12001 caacgctgct gcggtatcaa tacgtcgggt aaagtagcga ttacccggcc tggcccccag
    12061 caataagccc acgttacgcg ccggaactgc gttgacatcg ctccaggtca gctgcttgct
    12121 ggcgttgacc attactcgat cggcgataaa aatggtcgct cctgccacaa gtaacagtaa
    12181 gcaggcaatc tttagagtcc ggcgagaaaa acaaatacgg agaagaaggc ggggctgcat
    12241 ggtcgttatc cttaacgaaa ggggggaggt cgattttagg cgctaaagaa agaaaagata
    12301 acgcctgaca tcattttcag attttgtcct gcccaagcga caactgcgtt agccacagcc
    12361 gggtgtcgaa ctccagctgg tggtactgcg gctccatatg gcagcacaac tggtaaaacg
    12421 ctttgttatg ctctttctcc ttcaggtgcg ccagttcgtg caccacgatc atacgtaaaa
    12481 acggttccgg cgcgttgcga aacacagtag cgacgcggat ctctgctttt gctttcagct
    12541 tgccgccctg cacacgagaa acagcggtat gtaacccgag cgcgtttttt agcacatgga
    12601 tcttattgtc atacatcact ttattgatcg gcggggcatt gcgcagaaac tgatttttta
    12661 gatcctgagt atattgccag agggctttat cggtggcgta gtcgtgtgtt cccggatagc
    12721 gttttgccag cacatcgccc agacgctgtt cgttaatcag cgttcgcacc tgggaaagta
    12781 gctgctcggg ataaccctga agataagtaa gattgctcat aaccgcccac gaaaaagaga
    12841 aaaagggtat actcacgcac ccttttcagg ggcaacgtcg aaattttatc attcaggagg
    12901 gccgatgagc cacttagaca acggtttccg ttcactgaca ctacaacgtt ttccggcgac
    12961 ggatgacgtt aacccgctac aggcgtggga agcggcggat gaatatttgc tgcaacagtt
    13021 ggacgacaca gaaatccgcg gcccggtgtt gatcctgaat gatgcctttg gtgcgttaag
    13081 ctgcgcgctg gcggaacata agccgtacag cattggcgac tcatacatca gtgaactggc
    13141 gacgcgcgag aatttacgcc tcaacgggat tgatgagtcg agcgtgaagt ttctcgacag
    13201 caccgccgac tacccgcaac agccgggtgt ggtgctgatc aaagtgccga aaacactggc
    13261 attgctggaa caacaactgc gtgcgctgcg caaagtggtc acgtcggata cacgtattat
    13321 tgccggtgcc aaagcccgtg acattcacac ttccacgctg gaactgttcg aaaaagtgct
    13381 cggcccgacc accaccacgc tggcatggaa aaaagcgcgc ctgattaatt gcacgttcaa
    13441 tgaaccgccg ctggccgatg cgccgcagac cgttagctgg aagctggaag gtactgactg
    13501 gactatccat aaccatgcga atgtcttctc ccgcaccggg cttgatatcg gcgcgcgctt
    13561 ctttatgcaa catctgccag agaatctcga aggggagatt gtcgatctcg gttgcggtaa
    13621 tggcgttatt ggtctgacgc tgcttgataa aaatccgcag gcgaaagtgg tgtttgtcga
    13681 tgaatcgccg atggcggttg cttccagccg tttgaacgtt gaaaccaaca tgccagaggc
    13741 gttggatcgc agcgagttta tgatcaacaa cgcgctctcc ggcgtggagc ctttccgctt
    13801 taatgctgtg ctctgcaacc cgccgtttca ccaacaacat gcgctgaccg ataacgtcgc
    13861 ctgggagatg ttccaccatg cccgccgctg cctgaaaatc aacggcgagc tgtatattgt
    13921 tgccaaccgt cacctggatt acttccataa actgaagaag attttcggca actgcaccac
    13981 catcgccacg aataataaat ttgtggtgct gaaagcagtg aagctggggc gtcgtcggta
    14041 agattgggag ttacctgccg gatgcggcgt taacgcctta tccggcctac gttcagcacg
    14101 ttactcccag gccggataag acgcggcaag cgtcgcatcc ggcaatgtct gcccagttct
    14161 ggaatcgcgc ttccataaaa caaaaaatcc ctctcaccat cctctacatt ctcttgttta
    14221 gcgtttttct acgtttattc ttccgtcaca cagataaatt catacgttgc caatctgtca
    14281 acggatgtta tcatattgcc aatttgtcaa cggacgtgat gaagaatgca cctgataact
    14341 caaaaagcat tgaaagatgc tgcggaaaaa tacccgcaac ataaaacgga gttggtggct
    14401 ctggggaaca cgattgctaa gggatatttc aaaaaacctg agtcattaaa agcagtattc
    14461 ccatctctgg ataacttcaa atatctggat aagcattatg ttttcaatgt tgggggcaat
    14521 gaattacgtg ttgtagcaat ggtctttttt gaatcgcaaa agtgctacat acgtgaagtt
    14581 atgacgcata aagaatacga tttctttacc gctgttcatc gtactaaggg gaaaaaatga
    14641 ttgcgattgc cgacatcttg caagcaggag aaaagctaac tgcggtggta ccttttctgg
    14701 cgggtattca gaacgaggaa caatacaccc aggcgctgga actggtagat catctgctgc
    14761 tcaacgatcc tgaaaacccc ttgctggatc tggtgtgtgc caaaataacc gcgtgggaag
    14821 aatcagcgcc cgaatttgcg gaatttaatg ccatggctca agccatgcct ggcggtatag
    14881 ccgtgattcg tacccttatg gatcaatatg gtttaaccct tgccgatctg ccggaaattg
    14941 gcagtaaatc tatggtgtca cgcgttttga gcgggaagag gaaattaacg ctggaacacg
    15001 ctaaaaaatt ggcaacgcga ttcggcattt ctcccgcctt gtttattgat taacgcgacg
    15061 tgccggatgc gttgcatccg gcgcttcaaa taacgattta aatctccagc gccagccgtg
    15121 ttccctgggc aattgcccgt cgtgcgttca gctccatagc cacatcgcag ccgccaatta
    15181 aatgcacagt tttcccgcta tcaatcagcg gttgcgccag cgcgcggttt ggctcttgcc
    15241 ctgcgcagat caccacattg tccacagcta atacctgcgt ttcgccgttg atcaccacat
    15301 gcagcccgtc atcgtcaatc ttctgataac ttacgcctgg gatcattttc acaccccgcg
    15361 agagcagggt ggtgcgatgg atccagccgg tggttttgcc taacccctgt cccggtttgc
    15421 tggctttgcg ctggagcatc acaatttgcc gtgggctacg cgggatctgc attccctgcg
    15481 ggcttaagcc accagcctgt tgtaggctgc tgtcgatccc ccactcatta cagaacctgg
    15541 cgatattctg gctggttgat tcgcccggct gacttaaata catcgccgta tcaaaaccaa
    15601 tcccgccaca accgatgatg gcaaccttgt tgcctaccgg cgctttgtcg cgcagtacat
    15661 cgagataact caataccttc ggatgatcga tcccgtcgat aggcggaacg cgcggcacga
    15721 tcccactggc gaggatcgtt tcatcgaacg cctgtaactg atccgccgtc acggtgtgat
    15781 tgagtttcag cgtcacgccc gtcacttcga tcatccggtg gtaatagcgc agcgtttcgt
    15841 aaaactcctc tttgccgggg atctgtttgg cgatattaaa ctgcccgccg ctctcgctgt
    15901 gggcatcaaa caatgttacc tgatgcccac gcgccgccgc gttaatggca aacgccagcc
    15961 cagcaggtcc cgcaccgacc accgccagat tttttttctg cacggcagga aggattggca
    16021 ttttggtttc gtggcaggcg cgaggattca ccaggcacga ggtgactttg ccaacgaaga
    16081 tctgatcgag gcaggcctga ttgcagccaa tgcaggtgtt gatctcatcg gctcgccccg
    16141 attgcgcttt tgacagcagt tccgcatcag caagaaacgg tcgtgccatc gataccatat
    16201 cggcatcgcc gcgcgagaga atatcgtcgg caacctgcgg atcgttaatc cggttggtgg
    16261 ttaccagcgg cagcgagacg tggcctttca gtttgcgcgt gacccagcta aatgcgccgc
    16321 gcggcacggg cgtggcaatg gtcggaatac gtgcttcatg ccagccaatg ccggtgttga
    16381 taatggtcgc gcccgccgct tcaatggcct gcgccagctc taccgtttcg gcaaaagtcc
    16441 cgccgtcttc gaccaggtcg agcatcgaca gtcggtagat aataatgaag tcgttgccga
    16501 cgcgttcgcg caccgcacgc actacttcta cggcaaatcg catccggttg cggtaatcgc
    16561 cgccccactg gtcactacgc tgattggtgt gcagcgtcag aaattcgttg atcaaatacc
    16621 cttcggaccc cattacctct acaccgtcgt atcctgcctc ccgtgccagt tgcgcgcagt
    16681 gggcgaaatc gtcgatcagt tgcaggatct cttcatgggt gagttcgtga ggaacgaaac
    16741 ggttgatggg ggcctgcaat gcggagggag cgaccagatg cggttggtag ctgtagcgcc
    16801 cggtatgcaa aatttgcagg gctattttgc cgccttcctg atgtaccgct tcggtaatgg
    16861 tgcgatggtg tgggatctgg ctggcgtcgt tgagcattgc gccaccttcc atgccaacgc
    16921 ctgttaaatc tggtgcaatg ccgccgctga caatcagcgc cacgccgtga cgggcgcgtt
    16981 cggcataaaa cgctgccagc cgctcggcac cgtccgggta ttcctccagc ccggtgtgca
    17041 ttgagcccat caacacgcgg ttttttaacg tggtaaaacc taaatccagc ggggcgaaca
    17101 gcgacgggta gctcataaaa ttgtccagta tgtaaaataa ttgttatgtg gtcggatgag
    17161 ttctaattta gccgtcgccg gagaaaaggg aaaaggggag tgcggggttt gtgatgggat
    17221 tcaaaaagaa tacgcccggt ggtaacgccg gatgcgacgc ttgccgtgtt ttatccggcc
    17281 tgggggattg cacatgtagg gcggataagg cgttcacgcc gcatccgcca gtggcgcggt
    17341 gcagatgccg gatgcgacgc ttgtcgcgtc ttatccgacc tacgggaacg cacatgtagg
    17401 gcggataagg cgttcacgcc gcatccgcca gtggcgcggt gcagttgccg gatgcaacgc
    17461 ttgccgcgtt ttatccggcc aggaggattg cacatgtagg gcggataagg cgtttacgcc
    17521 gcatccgcca gcagttgcaa attattgctt acggaaaaaa tcgttataca acatatacaa
    17581 atgcgcggca ctccaggaga aatttggtgc gccttgctgc gcgccagtca gcgggttgta
    17641 attctcctga attgggccat cggcggttaa tcctttggcg tgccggaaga acgtatccgc
    17701 cagcttcagg gcatcatcac gataaccgta acgctccatc cctttcagag caaaccagaa
    17761 ctgatccacc catacgcgcc cgcgccagta gatatcagcg ccaaaagccg gattggttaa
    17821 cgccgccgtt cccagcggga caaaggtgtt gaactcttta ggatcgagca tcaccttcac
    17881 caccgcgtcg gcattggcct gcgttgccgc accgttaaac agcggcgacc agccttccgg
    17941 ccctttaccg cgctcaacaa tcggtttgcc cgcgcagccg ttcgccagtg gtttatcttc
    18001 aatacgtacg tcatagtaga actgggtagt cgggtcgaac atacaggtgt tgatgtagtc
    18061 cgcgagctgc tgtgccaact ggcgatagcg tttggcctct tctggcttac cgaggatggt
    18121 tgccatctcc gccagataat ggttatcgct gtacatatag ctggcctgat ccaccgactc
    18181 ctgcaatagc gagtagccca gcaacgttcc gtcctgactg cggttttcgg cgaatttcac
    18241 cgtccagtcg ctacgtttgc caccattagc gacatattta tccaactgtt ctttgtcgat
    18301 aaaaccaaag acggcggcat catcacgccc cgattcccac gacgcagcga cctgtgccgg
    18361 aatttccaga ctgtcgtact ggcctttctc caccacgcgg gcgtagttgt tcagcccaga
    18421 ctgcgtctct tctttgttgc ctttcttcac cgcaaacagc atctcgccgc tctcagtgtt
    18481 gtgggctttg tcgcgggtcg cgccatattc cggcacgccg ttgccgttgt gatcgcggtt
    18541 acgtaaccac cagtcgtgat aggcgaccag tttcgggtac atctctgcca accaggcttt
    18601 atcctgggtg acgttgtaca cttctatcac cgaccaggcg gcaaggctgg gtttggtatt
    18661 acgttcgttc cagttgccgc catcgccacc acgctcgggg ctaaggttcc acgctatcag
    18721 gtcggggaca aagcccacat cctgcggacg cacgcggtcg ccaggctgga tctgccagga
    18781 gaagaccgcg cggatattct ctttggcgat gtccggattg aaatgcgcca tcgcaaacgc
    18841 ctgcttctag gtatcccacg gccaggtctg attgccggag aaccagcgcc cggtcaccga
    18901 cggtgtaacg gtgttaaatt tcaccgcacc gcccggtgag cgccagttac cgttgagcgt
    18961 ttcgatcgct ttcaccgcga cgcgcgtctg ttccggcgtc gcatccggat tggttaaccc
    19021 tttcttcagg tattcttccc agcgttgctg cgaggcggtg agataaaacg ccggacgcgc
    19081 cagaatatcg cggatctgca tttgctcttt gctaacttcc tgagcggtca gcagatggga
    19141 ataggtggtg tagagcgtgg tcgaaccgtt gatatgcgcc ttactggtaa agcgattacc
    19201 gttgatttca gtctgcaccg gcagggattt atgcacctga tattccgatt cgccggaggt
    19261 cagcagatcc caggtggcgc gcactttgcc aaaggtgact ttcaggccat cacgggtggc
    19321 gctgattttg cgctgatagt cagggtattc gccagcaatg gttttatcgg aaagcggttt
    19381 cccttctttc gcttccagtt tttccagcag ttcgccgtcc cacaccagat ccagcggttt
    19441 attgctggtg attttggttt ccagtagtga cgtgcgcggc gtggcgaagc gcagagtcat
    19501 ttcgacttgc acatcttttg ctgtcagttt ttgcaccagc gcaccgggaa tactgtatgc
    19561 ctccagcgta aagtcgactt tcttgccgtc ctgccagacg gtcaggcggt cgaaattgct
    19621 ggccataaag ttgatgtact cttccgtcag cagcgcaacg cccggaaagc cgcccatggt
    19681 gttagggccg tctggcaaca gatgaccatg ccaggctccg agatcgaaaa acggattaaa
    19741 acgctggtga tcgtcgtaat cgtaatcctt catgtactgc ggcgcgccag tacggttaat
    19801 cacgttttta taattgtcgg cgttagcggc atgggcggaa aaacttatca gcagagcgca
    19861 ggttactggc gttaaaatag tttttatttt catgaaatta cagtccttat taccagtaga
    19921 aatattgcat caggaagatt tggtcgctgg gatcgtgaga ggcatttttc atgtagaagc
    19981 ggctatcaaa agccgtggcg aaacgtccgc cgccgtattc gtaccagata ccaaactgca
    20041 tgaaagaggt ggtttcatcg tcagcgtggt cagggcgatg tttggcgtag gtgtaagcgg
    20101 tggagagata aacgcccttt aacgcttcat acatggcgct caccatcatc ccactttcac
    20161 ttcccggtac gtccagcccg tcggcgcgtc cggtatggtg ccaggcgcga gcggcaaagt
    20221 taggagttag caggcccgtg agatagagct gtcctgtgcc gtcggtgatt tccagaccgt
    20281 tcatccaggt gatgccttcg gcaaggtcat actggatgta accgttcatc attgccggat
    20341 aggtgtattt gtcgtcatag cgatcgtatt tgccaaaatg tagccaggct ttgctttcat
    20401 catgatgtcc ggcaggagtc gcggtgacgc tataacgaaa gttgccgctt aagttctgta
    20461 ccttcagcgc agccataatg tcgcgggtat tgggaatgac gtagcccaga tcgggggtga
    20521 aatcgcccca ccattgcagg tcatccagcg aggaatccta acgcagactg agcatgattt
    20581 cggtgccatc attggtacga taaccgccat agaaacggtt aattccgccc tcgaaaccac
    20641 cccagctatg gtctgg
//
LOCUS       DADMIB010000067        20603 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.067, whole genome shotgun sequence.
ACCESSION   DADMIB010000067 DADMIB010000000
VERSION     DADMIB010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20603
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.067"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(56..481)
                     /gene="nudI"
                     /locus_tag="JNZ89_002252"
     CDS             complement(56..481)
                     /gene="nudI"
                     /locus_tag="JNZ89_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase NudI"
                     /protein_id="HAY8936121.1"
                     /translation="MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVEYGE
                     RIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSAN
                     REVKINEEFQDYTWVKPEDLVHYDLNVATRKTLRLKGLL"
     gene            760..1302
                     /locus_tag="JNZ89_002253"
     CDS             760..1302
                     /locus_tag="JNZ89_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936122.1"
                     /translation="MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTEST
                     GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGG
                     LQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARSTIMRPVSIEAGYRYLNLSGK
                     DGNRDNAVADGPYVGVNASF"
     gene            1402..2604
                     /locus_tag="JNZ89_002254"
                     /pseudo
     CDS             1402..2604
                     /locus_tag="JNZ89_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416752.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide deamidase-related
                     protein YfaY"
     gene            2824..3606
                     /locus_tag="JNZ89_002255"
     CDS             2824..3606
                     /locus_tag="JNZ89_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HAY8936123.1"
                     /translation="MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYL
                     LLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCH
                     LGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLSWQPAAVQQSIIEGL
                     VWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYPDVRCVAAPVFNANNELTAAIS
                     VVGTRLQINEEYRDYLAGKSIACARDISRLLGWKSPFDLQAS"
     gene            3621..4826
                     /gene="rhmD"
                     /locus_tag="JNZ89_002256"
     CDS             3621..4826
                     /gene="rhmD"
                     /locus_tag="JNZ89_002256"
                     /EC_number="4.2.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnonate dehydratase"
                     /protein_id="HAY8936124.1"
                     /translation="MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATP
                     MSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEG
                     KCVSDIKLIHDQMLNATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAV
                     RDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFW
                     LMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYEGYRELKRNAPVGMMVTSGE
                     HHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHA
                     VITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRD
                     CNLKRPYSH"
     gene            4883..6172
                     /locus_tag="JNZ89_002257"
     CDS             4883..6172
                     /locus_tag="JNZ89_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8936125.1"
                     /translation="MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQI
                     DTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWAD
                     TEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLS
                     GALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQ
                     LASEEQQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFT
                     ASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVA
                     LCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFA
                     SDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH"
     gene            6190..6993
                     /gene="yfaU"
                     /locus_tag="JNZ89_002258"
     CDS             6190..6993
                     /gene="yfaU"
                     /locus_tag="JNZ89_002258"
                     /EC_number="4.1.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
                     /protein_id="HAY8936126.1"
                     /translation="MNALLTNPFKERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLL
                     IDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTA
                     DQARQVASATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDN
                     LDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV
                     APDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY"
     gene            complement(7034..7936)
                     /locus_tag="JNZ89_002259"
     CDS             complement(7034..7936)
                     /locus_tag="JNZ89_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000156133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HAY8936127.1"
                     /translation="MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQT
                     LRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAA
                     MQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
                     IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ
                     CGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLE
                     QGIDRDQVLAATQLSEADLAANNH"
     gene            complement(8129..9319)
                     /gene="glpC"
                     /locus_tag="JNZ89_002260"
     CDS             complement(8129..9319)
                     /gene="glpC"
                     /locus_tag="JNZ89_002260"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HAY8936128.1"
                     /translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
                     DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG
                     SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYK
                     DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
                     AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWR
                     KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAG
                     TYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLA
                     QALA"
     gene            complement(9316..10575)
                     /gene="glpB"
                     /locus_tag="JNZ89_002261"
     CDS             complement(9316..10575)
                     /gene="glpB"
                     /locus_tag="JNZ89_002261"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase subunit GlpB"
                     /protein_id="HAY8936129.1"
                     /translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS
                     LDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQL
                     QGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLH
                     ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMI
                     LMPACFGLADDKLWRWLNEKLLCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG
                     DEVKKVTCKNGVVNEIWTRNHADIPLRPHFAVLASGSFFSGGLVAERNGIREPILGLD
                     VLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA
                     QGCGGGVCAVSALHAAQQIAQRAGGQQ"
     gene            complement(10565..12193)
                     /gene="glpA"
                     /locus_tag="JNZ89_002262"
     CDS             complement(10565..12193)
                     /gene="glpA"
                     /locus_tag="JNZ89_002262"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit A"
                     /protein_id="HAY8936130.1"
                     /translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
                     GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS
                     FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD
                     AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE
                     YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN
                     EIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
                     LLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEP
                     AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN
                     LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG
                     VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL"
     gene            12466..13824
                     /gene="glpT"
                     /locus_tag="JNZ89_002263"
     CDS             12466..13824
                     /gene="glpT"
                     /locus_tag="JNZ89_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HAY8936131.1"
                     /translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
                     RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
                     AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
                     WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP
                     PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
                     PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI
                     ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
                     YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRN
                     GG"
     gene            13829..14905
                     /gene="glpQ"
                     /locus_tag="JNZ89_002264"
     CDS             13829..14905
                     /gene="glpQ"
                     /locus_tag="JNZ89_002264"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HAY8936132.1"
                     /translation="MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLP
                     EHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRY
                     YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH
                     STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI
                     KNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
                     IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDAL
                     YNKAGVNGLFTDFPDKAVKFLNKE"
     gene            complement(14947..15189)
                     /locus_tag="JNZ89_002265"
                     /pseudo
     CDS             complement(14947..15189)
                     /locus_tag="JNZ89_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311149.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            15368..16018
                     /gene="inaA"
                     /locus_tag="JNZ89_002266"
                     /pseudo
     CDS             15368..16018
                     /gene="inaA"
                     /locus_tag="JNZ89_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416740.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA"
     gene            complement(16072..16326)
                     /gene="yfaE"
                     /locus_tag="JNZ89_002267"
     CDS             complement(16072..16326)
                     /gene="yfaE"
                     /locus_tag="JNZ89_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like diferric-tyrosyl radical
                     cofactor maintenance protein YfaE"
                     /protein_id="HAY8936133.1"
                     /translation="MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGS
                     CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM"
     gene            complement(16326..17456)
                     /locus_tag="JNZ89_002268"
     CDS             complement(16326..17456)
                     /locus_tag="JNZ89_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase 1 subunit
                     beta"
                     /protein_id="HAY8936134.1"
                     /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
                     LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
                     PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDE
                     LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
                     FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL
                     FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
                     WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL"
     gene            complement(17603..19888)
                     /gene="nrdA"
                     /locus_tag="JNZ89_002269"
     CDS             complement(17603..19888)
                     /gene="nrdA"
                     /locus_tag="JNZ89_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HAY8936135.1"
                     /translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR
                     SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL
                     YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR
                     VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP
                     TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
                     YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR
                     VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN
                     DVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
                     GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGECP
                     WFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET
                     SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV
                     GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
                     AQDDLVPSIQDDGCESGACKI"
BASE COUNT         4844 a         4992 c         5525 g         5242 t
ORIGIN      
        1 aattcgttaa ccactaaatt ttcaatctga cagccagtga tggctgtcat cattgttaaa
       61 gaagaccttt caaacgtaac gtttttcggg tggcaacatt caaatcataa tgcaccagat
      121 cttcaggttt tacccacgtg tagtcctgaa actcttcgtt tattttcact tctcggttgg
      181 cagaaacgca gtcaaaaatc aggtaaatca tataaatctc ttccttgcga ccatctgcat
      241 acgtcttggt gcgaatatca tcgctgaagg tccacggcgt gatttctgtc aaaagcagct
      301 gttctcccag ttcttcgcga atttcgcggc gtagtgcctc ttcaattcgt tcgccatact
      361 ccacgccgcc acccgaaagc gcccattgac cggggaaaac gccgcgatcg tcggccattt
      421 tgcacagcag ataagcacca tcattttgaa ttaaagggca tacaatagtc cgttgtcgca
      481 caggggtatt ccttataaat aaaaagaaac catgagaata cggtaactca gaaatatgtg
      541 aaagtgacag taatctcttt tgcgatgata actgcactta ttattatttt tgtgtgtatc
      601 ggtaaagtgt gtttattttt tcggcgttta attatttaag aagtatttag ttacaataag
      661 tgactagatc ccttttttcg ctcattgaat cctctgtgcc aggcagtaca atcccgcagc
      721 tttgggaatt ttgattaatt gcttgtggga aaggggataa tgaaaaaaat tgcgctagca
      781 ggtctggccg gaatgctgtt ggtttctgca tcggtcaatg caatgagcat cagcggtcag
      841 gcgggtaaag aatacaccaa tattggtgtc ggttttggga ctgaatcgac gggcctggcg
      901 ttaagcggta actggacaca taacgacgac gacggtgacg tcgctggcgt ggggctgggg
      961 ttgaatctgc ctctagggcc gttaatggcg accgttggcg gaaaaggcgt ttacaccaac
     1021 ccgaattacg gcgatgaagg ttatgccgca gcggtaggag gtggtttgca gtggaaaatt
     1081 ggcaacagct tccgtttgtt tggcgagtat tactactctc cggattcact ctccagcggt
     1141 attcaaagtt atgaggaagc gaatgctggc gcgcgttcca ccattatgcg tccagtcagt
     1201 attgaggcgg gttatcgcta cctgaatttg tcgggtaaag atggtaaccg cgacaacgcc
     1261 gtggctgacg gcccgtatgt tggggttaac gccagtttct gatcccttcc ggcgcggcat
     1321 tctgtcgcgc cattcagttt cttactacgc cttatctccc tttgcgttat agtgattcga
     1381 taacaaaagc aggagataac catgttaaaa gtggaaatgt tatccaccgg ggatgaagtg
     1441 ttacacgggc aaatcgttga cactaacgct gcctggctgg ccgatttttt ctttcatcag
     1501 gggctgccat tatctcgcct caatacggtg ggggataacc ttgatgactt agtcaccatt
     1561 cttcgcgaac gtagtcagca cgccgatgtg ctgatcgtta acggcgggct gggaccgacc
     1621 agcgatgatt taagcgcact cgccgctgcg acagcaaaag gtgaaggcct ggtgctgcat
     1681 gaagcctggc tcaaagagat ggaacgctat ttccacgaac gtggacgagt aatggcaccg
     1741 agcaaccgta aacaagcgga gctgcctgcc agtgctgaat ttatcaataa cccggtaggc
     1801 accgcctgtg gttttgccgt gcagcttaat cgttgcctga tgttctttac tcccggcgta
     1861 ccgtcagaat ttaaggtgat ggtcgagcac gaaatcctgc cgcgcctgcg cgagcgtttt
     1921 tctttaccac agccgccggt ttgtctgcgt ttaactacct ttggtcgttc ggaaagcgat
     1981 ctggcacaaa gcctggatac tctacaactg ccgccgggcg taacaatggg ctatcgctct
     2041 tcaatgccga ttatcgaact gaaactcacc ggaccggcaa gcgagcaaca ggcgatggaa
     2101 aaactgtggc tggacgttaa acgtgttgcc ggacagagcg tgattttcga aggcaccgaa
     2161 ggactgcccg tgcagatcag tcgcgaattg caaaaccgcc agttcagcct gacgttgagc
     2221 gagtaattca ccggtggttt attggctttg caactttctc gcgcaggtgc tccattgctg
     2281 gcgtgtgaag tggttccttc acaggaagaa aacctggcgc aaactgcgca ctggattaca
     2341 gaacggcggg ccaaccattt tgccgggctg gcactggctg tttcgggttt cgagaacgaa
     2401 catctcaact ttgcgctagc cacaccagac ggcactttcg ctctgcgtgt gcgtttcagc
     2461 actacgcgct acagcctggc tatccgtcag gaagtgtgcg caatgatggc actgaatatg
     2521 ctgcgccgtt ggttaaacgg ccaggatatc gccagtgagc atggctggat tgaggttatt
     2581 gagtccatga ccttatctgt ctgattccgc cactctgtgc cggtttactg caccggcaca
     2641 ttccccctcc ggcaaaactt gtccaacctg ttgcactcaa taagaaaaaa tccgtgcact
     2701 gattcacaaa tttgtgcgta atttctccag tccgctggac gaggagcggg atttgatgcg
     2761 cttcacaatt ttactccccc tgagcaacga gactgattcc agtatctaag actggagtcc
     2821 agtatgttgg aatcaagcaa agttcccgcc ctgacacggg ctattgatat tctcaatttg
     2881 attgcccgca ttggcccctg tagtgctgcg acgatcattg acacattggg aatccctaaa
     2941 agcacggcct atttgctgct taatgaactc aggcgtcagc gttttcttag ccttgatcac
     3001 caggaaaatt tttgtttgtg gaccaggctg gtggagcttt ctggtcatgc gttaagcaag
     3061 atggatctcc gggaactggc tcgaccgcgt ttgacgcaac tgatggatac caccgggctg
     3121 ttatgtcatc tggggattat tgataacggc agcgcttatt acattttaaa agtggagtca
     3181 tcagccacta tcagcgtgcg ttcccatgaa ggaaaaagcc tttcgcttta tcgctccgga
     3241 ataggtaaat gcctgctttc ctggcaacct gcagcggtac agcaaagtat tatcgaaggg
     3301 ctggtctggg agcaggcgac acccacaacg attactcatc cacagcaact tcacgaagaa
     3361 ctggcgcgta ttcgccgtca gggctggagc tatgacaacg gcgaagatta ccccgatgtc
     3421 cgttgtgtcg ctgcgccggt gtttaacgcc aataacgagc ttaccgctgc gatctcggtg
     3481 gtcggtaccc gcttacaaat caatgaagaa taccgtgatt atctggcggg caagtccatt
     3541 gcctgcgcca gggatatttc acgtctgttg ggatggaaaa gtccctttga cttacaagcc
     3601 tcataacaat ggagaacatc atgaccctac caaaaattaa acaggttcgc gcctggttta
     3661 ctggcggtgc gacagcagaa aaaggcgctg gcggcggtga ttatcacgac cagggggcga
     3721 atcactggat agacgatcat attgccaccc cgatgagtaa ataccgcgat tacgagcagt
     3781 cacgccagtc atttggcatt aacgttcttg gcacgttggt tgttgaagtc gaagcagaaa
     3841 acggccagac cggattcgct gtttcgacag ccggtgaaat gggctgtttt atcgtcgaaa
     3901 aacaccttaa ccgtttcatt gagggtaaat gtgtcagtga tatcaaactg atccacgatc
     3961 aaatgctcaa tgccaccctg tattactccg gctctggtgg cttggtgatg aatacgattt
     4021 cctgtgtcga tctggctctg tgggatctgt tcggcaaagt ggtcgggctt ccggtttata
     4081 aacttttagg cggcgctgtt cgtgatgaga ttcagttcta cgccacaggt gcgcgtccgg
     4141 atctggcaaa agagatgggc tttatcggtg gcaaaatgcc gacgcactgg gggccacatg
     4201 atggcgatgc ggggatccgc aaagatgccg ctatggtcgc ggatatgcgt gaaaaatgcg
     4261 gtgaagattt ctggttaatg ctcgactgct ggatgagtca ggacgtgaac tatgcgacca
     4321 aactagccca cgcttgcgcg ccctataacc tgaaatggat cgaagagtgc ctgccgccac
     4381 agcagtatga aggttatcgc gaactgaaac gcaacgcgcc agtcggaatg atggtcacca
     4441 gcggtgagca ccacggcaca ctgcaatctt ttcgtacgct ttcagaaacc ggtatcgaca
     4501 ttatgcagcc ggatgttggc tggtgcggtg gtttaaccac gctggtggaa attgccgcaa
     4561 tcgccaaatc cagggggcaa ctggtggtgc cgcacggttc gtctgtttac tctcaccatg
     4621 cggtgatcac cttcaccaat acgccattca gcgaattcct gatgaccagc ccggattgtt
     4681 caacgatgcg tccgcagttt gacccgattc tgctcaatga gccggttccg gtgaatggtc
     4741 gtattcataa atcagtgctt gataaacccg gttttggcgt cgaactcaat cgtgactgca
     4801 atttgaaacg cccctacagc cactaatcac tccgggcgtt gctgtgacaa cggtaacgcc
     4861 cacatattct aaggagcttt ttatgagcac cgctttgctt gacgccgtgg tgaagaaaaa
     4921 ccgtgtgcgt ttaattccgt ttatgttggc gctgtatgtg ctggcgtttc tcgaccgttc
     4981 gaatatcggt tttgccaaac agacctacca gattgatacc gggttgagta atgaagctta
     5041 tgcgctggga gcaggcattt tctttgtggt atatgcgttt ctgggtgttc cggcgaatct
     5101 tttgatgcgc aaactggggg ccagaacctg gattggtacg acaacactgc tgtggggatt
     5161 tctttcggca gccatggcat gggccgatac tgaagcgaaa tttctgatag ttcgcactct
     5221 gcttggtgct gcggaggccg gatttttccc tggtatgatt tatctcacct cgcaatggtt
     5281 tccgcagcgt aatcgcgcca gcattatggg gctgttctat atgggcgcac cgctggcgtt
     5341 aacactggga tcaccgcttt ccggcgcgct gttggagatg catggattta tggggcatcc
     5401 cggctggttc tggatgtttg tgattgaagg attgttggca gtcggtgctg gggtattcac
     5461 attcttttgg cttgatgaca caccggagca ggcacgtttt ctgagtaaac aagaaaaaac
     5521 gttgcttatc aatcaactgg caagtgaaga acaacagaaa gtgacttctc ggctgagcga
     5581 tgcgctgcgt aatggccgag tctggcaact agcgattatc tacctgacca ttcaggtggc
     5641 ggtttacgga ttaattttct tcctgccgac ccaggttgcg gcattgctgg gaacaaaagt
     5701 gggctttaca gcgtcggtgg tcaccgccat tccgtgggtt gcggccttgt ttgggacctg
     5761 gcttattccg cgctattccg ataaaaccgg cgaacggcgt aatgtcgcag cgctgacatt
     5821 actggcggcg ggcattggta ttggtctgtc cgggctgctt tctccagtaa tggcgatcgt
     5881 agcgctgtgt gttgcagcta tcgggtttat tgccgtgcag ccggtgttct ggacgatgcc
     5941 gacacaactg ctttccggta cggcgctggc tgcggggatt ggttttgtaa acctgtttgg
     6001 tgcagtgggc gggtttattg ccccgatcct gcgcgtgaaa gcagaaacgt tatttgccag
     6061 cgatgcggca ggattactga cactggcagc ggtggcggtc atcggttcgc tgattatttt
     6121 cactctgcgt gtaaatcgta ctgttgcgca gaccgacgtg gcacatcatt aaataggtta
     6181 aggaacacga tgaacgcatt attaaccaat ccctttaaag aacgtttacg caagggcgaa
     6241 gtgcaaattg gtctgtggtt aagctcgact acttcttata tggcagaaat tgccgctact
     6301 tccggttatg actggttgct gattgacggg gagcacgcgc caaacaccat tcaggatctt
     6361 tatcaccagc tacaggcggt agcgccctat gccagccaac ccgtgatccg tccggtggaa
     6421 ggcagtaaat cgctgattaa acaagttctg gatattggcg cgcaaactct attgatcccg
     6481 atggtcgata ctgccgatca ggctcgtcag gtggcgtctg ccacgcgcta tcctccctac
     6541 ggtgagcgtg gtgttggggc cagtgtggca cgggctgcgc gctggggacg cattgagaat
     6601 tacatggcgc aagtcaacga ttcgctttgt ctgttagtgc aggtggaaag taaaacggca
     6661 ctggataacc tggacgagat cctcgacgtc gaagggattg atggcgtgtt tattggacca
     6721 gcggatcttt ctgcgtcgtt gggctacccg gataacgccg ggcacccgga agtgcagcga
     6781 attattgaaa ccagcattcg gcggatccgt gctgcgggta aagcggctgg ttttctggct
     6841 gtggctcctg atatggcgca gcaatgcctg gcgtggggag cgaactttgt cgctgttggc
     6901 gttgacacga tgctctacag cgatgccctg gatcaacgac tggcgatgtt taaatcaggc
     6961 aaaaatgggc cacgcataaa aggtagttat tgatatcaaa ggcccatggg gatcggctgt
     7021 gggcctgtgt taattagtgg ttattcgctg ccagatcggc ttcgcttagc tgggtggccg
     7081 cgagcacctg gtcacgatca atgccctgtt ccagcatgcg caaagcaatt ttaatggctt
     7141 gttcatgcat accttcctgc cagccaattt gatgcccttc ctgccgtagc cgttcagcaa
     7201 tagtcattaa tctctccttt tgtagtggtg aacgttcggc aatctcctca ataaaacggg
     7261 tgaaacggga ggtatcgccg cattgcagca gataattaaa cagtgtttgt agctggctgt
     7321 cattagtgaa gcctctaacc aaaagcgtgg tgatcctgtc gaccatgccg attaaatcgc
     7381 ggtcgcgaat atgcttttga atcagttcca gcagagctat acgccgatgt tgcatgatct
     7441 catcgtcagg tacgatggtg atatccacca acggaaaagc ttcggtgtac aactgccggg
     7501 caagttgcgg atcgtcaaac tcatccagcc agttaagtga gtacgggtag ggcgatgttt
     7561 cgccatgata aaacagcaat ggcaccacca gcggaactct gtcatagcct ttatccaggt
     7621 gacgctgcat ggcggcagtg gcatagcgca ttagccgaaa agccatattc ttttctgcag
     7681 agctttgatg ttcaatcacg cagtagatat agccgtcacc gtcgctggtt tccacggacc
     7741 acaaaacatc cgagtagtaa gcgcgtaaac ttttttcaat aaaactagtg ggttccaggc
     7801 gtaaggtttg caggttgcaa agcttgcgca gtggttctgg taaatgtatt tcgagaaaat
     7861 cccgtgcggt ttcgggtgtg aacataaagg ttttaaatac cgcatcatgc ggggaggagg
     7921 ttgttgattc ggtcatggtt gtccgtcacc tgatatttat gatgacgcga cattacggtt
     7981 atcctaggcc tttgacatct gccagtttca gcctttgcga gacgttttca gaggaatttt
     8041 cactgcgttg caacgcatac attgggcacg gaatcgtgta cgcaaaaatg cccggtaacc
     8101 acatgcttac cgggcatcag aaaggagttt aagccagcgc ctgggccagt agcgtaatcg
     8161 gatgttcgca gcgaagactt gtggacatct caatctgcca tttacaggtt tcgcagtcgg
     8221 tgaccaccag atctgcgccg ctttcttcta tctggcggaa cagtggtgcg ccgatggctt
     8281 gtgaggtggg gtagttctct tttttgaaac cgtaagtacc cgcaataccg cagcactggg
     8341 aatccagcac cgttaactca agccccggga ttttacgcaa cagctccagg gtgtagagcg
     8401 tccagcccat tttttccata tggcacggag tgtgataaac cactttcagc ggcagcggtt
     8461 tcagcggtaa cgttttgcct tcgtccagct tgcgccacag ccagcgggtt gccagttcga
     8521 tatgatcgcg caagcctttg ttgtcgacat tcagcacttc cgggtattcg tcgcgcaggg
     8581 caaatgtaca ggttgaggag gtggcaatca ccggaatgcc ttttactccc acagcttcgc
     8641 ggatcgactc tacattcgta attgcctgtt tgcgtgcttt atcggtaaag ccgttggcga
     8701 ttagcggtac gccgcagcat ttttctttgc tgagcagttg tacaccggta cccattgcgt
     8761 tgagcacttt aattaaatct ttacctaact gcggatggtt gtagttaacg aagcagccgt
     8821 gaaagaaagc gacctggtct ttatattgtg cttgctgagc cgctatgctg cgataccagc
     8881 gacggaacgt gccgaaggag tatttcggta gcgtgcgacg atgatcgatt tttaacgccg
     8941 catcaagcag ctgccgcacc ggtttcagcg aggtagcggt gttgacgatt ggtgcgaacg
     9001 gcgtggaaac gctacccatc aggtcggtat gactcaacac aaaattacgc agcgacgggc
     9061 gcgtggtgtc atattttgcc cgcgcgcgct ggataatatc gccaatcttc acatcggacg
     9121 ggcaggcgac ttcacaacgt ttgcagttga tgcaatattt cagcgcctcg tcatacagtg
     9181 cgccatcttt caaacgcaga cgctcgccat ccggcccggc ttgttttggc cctggataac
     9241 cgggattcac ccggctcacc gggcaggcgg tggtgcagac ggtgcactta atgcagtttt
     9301 cgaagctggt gtcgttcatt gttggcctcc tgcgcgttgg gcaatctgtt gagcggcatg
     9361 taaagcactg acggcacaaa caccgccgcc gcatccctgg gcgatgggat caaatccgcc
     9421 cagcaccgaa ccgatggcaa acaggttctc aatggtttgc cctgcctgcg acgggcgtag
     9481 cgtctcatca gtggttacac cgaactgctg ccacggttgc ggcgcaaaaa aatcgccctt
     9541 ataccattca ccccgcgtgg cggtttgtag cacatcaagg ccgagaatcg gctcgcgaat
     9601 gccgttacgt tccgctacca gtccgccact aaagaaactg ccgctggcga gaaccgcgaa
     9661 atgtggacgt agcggaatat cggcgtgatt gcgggtccag atttcattca ctacgccatt
     9721 tttacaggtc acttttttca cttcatcgcc cggcatccac acgccaccct ggcgcacaaa
     9781 ctggcgctgt aactggtttt gcagacgaat gcccagcacg gaaggcggca gcgttggcaa
     9841 aagcatcagt gaacaaagta gtttttcatt caaccaacgc cacagtttgt catcggccag
     9901 gccgaagcag gcaggcatca ggatcatttc gcaggtattg gcgacaggaa taagcgcatc
     9961 aagtaacagc ggccagtttt cttcattatc aaggaaacgg gcgatattca cagcgcgaaa
    10021 ttcggtggcg ttattgcgca ggacatccag ttccggcagc tctatttctg cggtttcaac
    10081 cgaaagatcc agttcgtgca acgaagccgc cgcaagatgc gcctgaaaat ccatcaggcc
    10141 gcttatcccg accacacata ttttcttcgc gggcaacggc cagacgggga cttctggcga
    10201 acttagccag gtagagcgca gagtgccgag cggcgtaatc cgctggtgag ccagttctac
    10261 gctgccctgc aattgcgcac cgctttcagc gattaatgcc tgcgcctggc aagcgagatc
    10321 gagcacgcgt tgtggcccga gaagagagta aggatgtgca ggtgcctgct gacgcaaaga
    10381 ttccagtcca ctgtgaatgt ctgccacggg ttgaccatct ggcagatggc tcagcaaatc
    10441 cagcgaaccg gatgagaaat gcaacgcgct ttgaccacgc gtgacaatgg cacagcgcag
    10501 gccgtgtttt tgcagttgca ggccacagag taatccggcg aggccgccgc ccataatgac
    10561 agtatcaaag cgcatctttc tgctccttct ccagaccaca cagtccctga taaacccagc
    10621 gggtaaattc gctttcgcgc agtgcgtctc cccaggcgat gggttgcacg cctttccagc
    10681 gttcgttaag gaaggtggaa agttgctcga tagattgcgc ggacgtcgtg acgttaaacc
    10741 gttgcagcag tccggcagcg cggcaggcgc agagttcgcc ctggcaggtg cccatcccca
    10801 cacgggtacg acggcgtaaa tccagcaggc tattaacgtt taaattttct accgcgtact
    10861 gcacttcacc cgcagttacc gcttcgcact cacataccag gctacggtgc agacggcctt
    10921 cgctcagcca ggcaggcgtg cgatcgccat gacgataaac cgcagaaccg cgcagcgggg
    10981 caggcaggga gatgacttta cgcaaggtaa cttcagcggg ttcttgtgaa ccaggcagtg
    11041 ccagatcggc agtcgtacag gggcgcgtgt tgcccagttt gcggcatacc gcgtcggtag
    11101 cccattcagc catcagccga taggtcatca gtttgccacc ggtgatggtg ataaatccgt
    11161 ccagaccatc gcgttcagca tggtcgagca gcacgatgcc acggctgacg ttacgtccgc
    11221 tcggatcgtc atcgctggca accagcgggc gcacgccaga ataggcccgc aaaatgcgcg
    11281 ttttcgccat cacgggggcc agtttttccc cttcacgcag cagaatatca acctcttctg
    11341 ccgtcactcg attatcgtca atctcgttgt aatcaatacg taaagaggtg gtaccaatca
    11401 gcgaaatggt atcgccaggc accagaatat cggcgtcgga aggtttacgg cagcggttga
    11461 tcacatgctg gttaatgcgg tgatccatga tcagcagcga tcctttcgcc gggaacatgc
    11521 gaatgcgcag atcggcatat tcggcaatgt gttgccccca gatcccagcg gcattaacca
    11581 cgacaggtgc atgaagggcc tgagtttcgc cggtgagatg gttacgtaca cgaacaccgc
    11641 acaccgtcgc gccttcacga atcagccccg tgacttcatg agcggtaagg ataacggcac
    11701 cgtgttcttt ggcatccagc atgtttgctg cggtcagacg aaatggatca acggtgccat
    11761 ccggaacttt caccgcgcca atcagtgccg ggttaacggc aggttcgata atgcgcgctt
    11821 gctgcgggtc tatagcttct gcgctgatcc ctgcttcttc gcaggcgcga ataaaagtgg
    11881 cctggaatga gaggtcatct tccggcaggg tgataaacag gccgttggtt ggttcaacgc
    11941 agtgacgtgc aatgcgtttc aggatctggt tttcactaat gcattcgcgg gccgattccg
    12001 catcggttac cgcatagcgc gcaccgctgt gcagcaggcc gtggttacgc ccggtggcac
    12061 cggttgcgat gtcgtggcgc tcaaccaaaa tcacgcgcag cccgcgcagg gcacagtcgc
    12121 gggcaatccc ggctcccgtt gcgccgccgc caatgataat cacgtcactt gattgcgagt
    12181 cgcgagtttt cattgttatc cctctgaagt tcgtttttta ccatttagcc atagtaaaaa
    12241 catgaattgt ttgatttcgc gcatgttcgc tcataattcg aaagtgaaac gtgatttcat
    12301 gcgtcatttt gaacattttg taaatcttat ttaataatgt gtgcggcaat tcacatttaa
    12361 tttatgaatg ttttcttaac atcgcggcaa ctcaagaaac ggcaggttct ctcactgaat
    12421 caggctgtta atcataaata agaccacggg ccacggaggc tatcaatgtt gagtattttt
    12481 aaaccagcgc cacacaaagc gcgcttacct gctgcggaga tcgatccgac ttatcgtcga
    12541 ttgcgctggc aaattttctt ggggatattc tttggctatg cggcttacta tttggttcgt
    12601 aagaactttg cgcttgctat gccttatctg gtcgagcagg gattctctcg cggtgattta
    12661 ggtttcgcgc tttcggggat ctcgatcgct tatggatttt cgaaattcat aatgggttcg
    12721 gtatcagatc gctcgaatcc gcgcgttttc ctccccgcag gtttgattct ggcggcggca
    12781 gtgatgttgt ttatgggctt tgtgccatgg gcgacgtcga gcattgcggt gatgtttgta
    12841 cttttgttcc tctgcggttg gttccagggg atggggtggc cgccgtgtgg tcgtactatg
    12901 gtgcactggt ggtcgcagaa agaacgtggc ggcattgtgt cagtgtggaa ctgtgcgcac
    12961 aacgttggtg gtggtattcc gccgctgctg ttcctgctgg ggatggcctg gttcaatgac
    13021 tggcatgcgg cgctctatat gcctgctttc tgcgccattc tggtggcatt attcgccttt
    13081 gcgatgatgc gcgatacccc gcaatcctgt ggcttgccgc cgatcgaaga gtacaaaaat
    13141 gattatccgg acgactataa cgaaaaagcg gaacaggagc tgacggcgaa gcaaatcttc
    13201 atgcagtacg tactgccgaa caaactgctg tggtatatcg ccatcgccaa cgtgttcgtt
    13261 tatctgctgc gttacggcat cctcgactgg tcaccgactt atctgaaaga ggttaagcat
    13321 ttcgcgctgg ataaatcctc ctgggcctac ttcctttatg aatatgcagg tattccgggc
    13381 actctgctgt gcggctggat gtcggataaa gtcttccgtg gcaaccgtgg ggcaaccggc
    13441 gttttcttta tgacactggt gaccatcgcg actatcgttt actggatgaa cccggcaggt
    13501 aacccaaccg tcgatatgat ttgtatgatt gttatcggct tcctgatcta cggtcctgtg
    13561 atgctgatcg gtctgcatgc gctggaactg gcaccgaaaa aagcggcagg tacggcagcg
    13621 ggctttaccg ggctgtttgg ttacctgggc ggttcggtgg cggcgagcgc gattgttggc
    13681 tacaccgtgg acttcttcgg ctgggatggc ggctttatgg taatgattgg cggcagcatt
    13741 ctggcggtta tcttgttgat tgttgtgatg attggcgaaa aacgtcgcca tgaacaatta
    13801 ctacaaaaac gcaacggagg ctaatggcat gaaattgacg ctgaaaaacc ttagcatggc
    13861 gatcatgatg agcactatag tcatgggaag cagtgcaatg gcggcggaca gcaacgaaaa
    13921 aatagtcatc gcccatcgcg gtgccagtgg atatttgccg gagcatacgc tgccagcaaa
    13981 agcgatggcg tatgcgcagg gagcggatta tctggaacag gatttggtga tgaccaaaga
    14041 cgaccatctg gttgttctgc atgaccatta tctcgatcgt gttactgatg ttgccgatcg
    14101 tttcccggat cgggcgcgca aagacggtcg ttactacgcg atagatttca cgctggatga
    14161 aattaagtcg ttgaaattta ccgaaggttt cgatattgaa aacggtaaaa aagtgcagac
    14221 ttatccgggg cgtttcccaa tgggtaagtc cgacttccgg gtgcacacct ttgaagaaga
    14281 gattgaattt gttcaggggt taaatcactc taccgggaaa aatatcggta tttatccaga
    14341 aatcaaagcg ccgtggttcc atcatcagga agggaaggat attgcggcaa aaacgctgga
    14401 agtgctgaag aaatatggtt acaccggtaa agacgataaa gtttatttgc aatgttttga
    14461 tgctgatgag ctgaagcgta ttaagaatga gctggaaccc aaaatgggca tggagctcaa
    14521 tctggtacag ctgattgcct ataccgactg gaatgaaacg cagcagaaac agccggatgg
    14581 aagctgggtt aattacaact acgactggat gtttaagccg ggtgccatga aacaggtggc
    14641 ggaatatgca gatggtattg gtccggatta ccatatgttg attgaggaga catcgcagcc
    14701 gggtaatatc aaactcactg gcatggtgca agatgctcag cagaataaac tggtagtgca
    14761 tccttatacc gtgcggtcag ataaactgcc tgaatacact cctgatgtga atcagttata
    14821 tgatgctctg tataacaaag cgggtgtaaa tgggctgttt actgatttcc ctgataaggc
    14881 agtaaaattt cttaataaag agtaatgtta ctgcaggatg gcgttcatgc gccatcctgt
    14941 ctcatatcaa atttttccaa tcgccactaa ttgttccatg cacatttgta gtaaaaacag
    15001 tggactgcct tctaccggct tttctttagc cagcaacgaa atctgtcgat agaaagttgg
    15061 ttcgagagga acggaacaca attcacctgc aatgcttttc agcgttaact ctggttgtaa
    15121 ggcgatgcct aatccctgtc gaataaaatt catcgctgta tccgcctgat taaattcaca
    15181 ttttatctgc tgggcgcact attagtggta gtggctggtg gaatctatgc gctgcaaatg
    15241 aagggtaaaa gcggtgtcaa gctagtagtg gcaaaagaaa ttcattaata cgacacgttt
    15301 cattaagatt ttcctcaggt aaccacctat agtcattgtc gttaataaaa acgacaggcg
    15361 atagggtatg gcagtttcag caaagtacga cgaatttaat cactggtggg caacagaggg
    15421 cgactgggtt gaagagccta actatcgccg taatggtatg agcggggtgc aatgcgtcga
    15481 gcgcaacggc aaaaagctgt atgtaaagcg catgacgcat catctgtttc attctgtacg
    15541 ttatccgttc ggccgaccaa cgattgtccg tgaggttgcg gtaattaaat aactggaacg
    15601 ggccggtgtc atcgtgccga agatcgtttt tggtgaagcg gtgaaaattg agggtgaatg
    15661 gcgagcgttg ctggtgactg aagatatggc ggggttcatc agcattgctg actggtatgc
    15721 ccagcatgca gtatcgcctt attctgacga agtacggcaa gccatgttga aagcagtggc
    15781 gctggcgttt aagaaaatgc atagcattaa tcgtcagcat ggctgttgtt atgttcgcca
    15841 tatctatgtg aaaacagaag gtaaggcaga agctggtttt cttgacctgg agaaaagtcg
    15901 tcgccgcttg cgtcgcgata aagcgattaa tcatgacttc cgccagctgg aaaaatatct
    15961 ggagccaatc cccaaagcgg actgggagca ggtgaaagcg tattactacg ccatgtaatc
    16021 gttgtaggcc agataagaca cataagcgtt gtatctggca ctacaaccaa ttcacatctc
    16081 gatttcaata tcgccttttg cccggcaaca acagggcaaa atttcccccg gctgaataaa
    16141 ggctaacggt tcggcaatcc agtcaacttg acctgcaacc aggcgtgtgc gacaggagcc
    16201 gcagtaacct tcgcgacact ggtactcaac cgccacattg tgggattcca gcgctgccag
    16261 aagggaaggg tgttcatcct ggcacagcag ttgtgtgcca gtgatgcgca gggtaacgcg
    16321 ggccatcaga gctggaagtt actcaaatcg tcggtgtcca cttccgagtc aatctgcccg
    16381 accagataag aactgacttc cacttcctgc ggagcaacct gcacgttatc agacaccagc
    16441 caagtgttga tccacgggat cgggttggag cgcgtctgga acggcagatc caaaccgact
    16501 gcctgcatac ggatattggt gatgtattca acgtactggc agagaatgtc tttattcaga
    16561 ccaatcatcg aaccgtcgcg gaacagataa tccgcccagt ctttctcctg ttgagctgcc
    16621 tgaacaaaca ggtcatagca ctcctgctta cactcttcgg caatttccgc catctcagga
    16681 tcgtccgcgc cgctgcgcag cagattcagc atatgctggg tgccggtcag gtgcagggct
    16741 tcgtcgcggg caatcaggcg aataattttg gcgttgcctt ccatcaattc gcgttctgca
    16801 aaggcaaagg aacaagcaaa gctgacgtag aagcggatcg cttccagcgc gttaacgctc
    16861 atcaggcaaa gatacagttt tttcttcagc tcgcgcaggc taacggttac ggttttaccg
    16921 ttaacggtgt gggtgccttc gcccagaagg tgccagtagc tggtcatttc gatcagttca
    16981 tcgtaatagc tggagatccc ttccgcacgt ttctggatct gctcgttggt gacgatatcg
    17041 tcaaacacaa cagacggatc gttaacgata ttacgaatga tatgagtata ggaacgggaa
    17101 tgaatcgttt ctgagaacgc ccaggtttcg acccaggttt ccagttccgg aatagaaata
    17161 agcggcaata gcgccacgtt cggactacga ccctgaatgg aatccagcag cgtctgatat
    17221 ttcaggttgc tgataaaaat gtgtttttcg tgctccggca gcgcctggta atcgatacgg
    17281 tcgcgggaga cgtcaacttc ttccggacgc cagaagaaag agagctgctt ttcgatcagc
    17341 ttttcgaaga tgtcatattt ttgctgatcg tagcgggcca cgttgaccgg ctgaccaaag
    17401 aacatcggtt ctttgagctg atcatttttc gtctgtgaaa aggtggtata tgccatgagt
    17461 gtgtcctgtt gggagtttaa tgccggataa ggcattttac gccgcatcct gtgcctgatg
    17521 cgacgctggc gcgtcttatc aggcctacaa atccgagccg taggccggat aaggcgttca
    17581 cgctgcatcc ggcatctcaa tatcagatct tacatgcgcc gctttcgcag ccatcgtcct
    17641 ggattgacgg taccagatcg tcctgcgcgt cttcagcgcc gtcacgggtg ttctgataat
    17701 acagcgtttt gaccccgaat ttgtaggcgg tgagcaggtc tttcagcaac tgctgcatcg
    17761 gcacttttcc tgacgggaaa cgtgacggat cgtagttggt gttagcagag atcgactgat
    17821 cgataaattt ctgcatgata cctaccagtt gcaggtagcc atcgttaccc ggcatttccc
    17881 acagcagctc ataggcgtcg tgcaggtgct cgtagtccgg caccacctgg cgcaaaatac
    17941 cgtctttcga cgctttgatg ctgacgtaac cgcgcggcgg ttcaataccg ttagtggcgt
    18001 tagagatctg cgaagaggtc tcggacggca tcagggcaga aagcgtggag ttacgcaggc
    18061 cgtgcgtttt gattgattca cgcaatgctt cccagtcgta atgcagcggc tcattagcga
    18121 tggcatccag atctttctta taggtatcga tcggcaggat ccctttcgcg taagtggttt
    18181 cgttaaacca cgggcactcg ccttgctctt tagccagctc attagacgct ttcagcaggt
    18241 aatactgaat cgcttcgaag gttttatgcg tcaggttgtt ggcgctgccg tcggagtagc
    18301 gtttaccgtg cttcgccagg tagtaagcga agttgatcac accaataccc agcgtacgac
    18361 gacccatcgc tccacgtttg gcggccggga tcgggtaatc ctgataatcc agcagcgcgt
    18421 caagtgcacg aaccgccaga attgccagct cttccagttc atccaggtta ttaattgcgc
    18481 ccaggttgaa agcagacagc gtacacagcg cgatttcacc gttctcgtcg ttgacgtcgt
    18541 tcagcggttt ggtcggcagg gctatctcca ggcacaggtt agactgacgc actggcgcga
    18601 tggccggatc aaacgggcta tgggtattac agtggtcaac gttctgaata tagatacgac
    18661 cggtagacgc acgttcctgc atcatcagcg agaacagctc aacggctttc acacgctgct
    18721 tgcggatgct gtcgtctttc tcatatttgg tatacagacg ttcaaactct tcctgatcgg
    18781 cgaagaacgc gtcgtacagc cccggtacgt cggacgggct gaacagggtg atatcttcac
    18841 ctttcagcag acgggtatac atcagtttgt tgatttgtac cccgtagtcc atatgacgca
    18901 cgcggttgcc ttccacacca cggttgtttt tcaacaccag caggctttcc acttccagat
    18961 gccacatcgg gtagaacagc gttgccgcac cgccgcgcac accgccctga gagcaggatt
    19021 tcaccgctgt ctggaaatgt ttgtagaacg gaatgcagcc ggtatggaac gcttcaccac
    19081 cgcgaatcgg gctacccagc gcacgaatac gcccggcgtt gatgccgatc ccggcacgct
    19141 gggaaacgta tttaacaatc gcgctggagg tggcgttgat ggaatccagg ctgtcaccgc
    19201 actcgatcag tacgcaggag ctgaactgac gagtcggggt acgcacgccg gacatgattg
    19261 gcgtcggcag cgaaatttta aatgtggaaa ccgcgtcgta aaaacgcttc acatattgca
    19321 ggcgcgtttc acgcgggtag ttcgagaaca ggcacgcggc aaccagaata taaaggaact
    19381 gggcgctctc atagatttcg ccggtcacgc ggttctgtac cagatatttg ccttccagct
    19441 gcttaacggc agcataagag aaggtcatat cacggtcgtg atcgataaac gtgtccatct
    19501 gcttgaactc ttcttccgtg tagtcttcca gcagatgatt atcgtatttg cccatctcga
    19561 ccattttcac cacgtggtcg tacagcgcag gcggctcaaa ctggccgtag gcttttttac
    19621 gcaggtggaa gatcgccagg cgcgcggcga gatactgata atccggcgca tcacgggaga
    19681 tcaggtctgc ggcagccttg ataatggttt cgtggatgtc agaggtcttg ataccgtcat
    19741 aaaactgaat gtgggagcgc agctcgacct gggaaatcga aacgttatgc agtccttctg
    19801 ccgcccaatc cagaacgcga tggattttgt cgagattgat gcgctctgtg ctaccgtcgc
    19861 gctttgtcac cagcagattc tgattcatgt atgtcgtacc tgtttttgga attctttccg
    19921 caatagtttc atgcagacta cctgtagtac gggaagctgc ttagaacact atatataggg
    19981 ggtatgtttg ggattcactg caagatagtg tgaaaatggc cctcttgcaa gtgcataact
    20041 ttgtggataa ctcaggaagg aaaaagtggc tttcgcgcac cttaggtcag acaaggtgtc
    20101 cgggaaagtc aatgggaaga gaaaaatttg ttaaaaataa ctgttcggcg atttcttgaa
    20161 cggtagaata ggttggataa attgatatag atggtttatt aatctttttg ctaatgattg
    20221 caaaaattga tctaagcacg agtcatcaca taatctgatg tatcagttgt ggtcaatata
    20281 taagcgaatg taagcgattg ttgatgtcga aatggttgtt ttctattcgg ttattgttaa
    20341 atgcgaagcc attttgttaa tttaccttat attataaaaa aattattcat tactttaatt
    20401 tagtttaaat ataactggta tcccttaagg ttattaactt gaattatgac gcactgatat
    20461 tattcatcaa ataataacaa aatagccatt gcatcgggtt ggacaattta caaaagaaag
    20521 ataacccata ttgtataatg cgtttaaata tgccgtctta tataaaatga tggtcagatt
    20581 aatatgcgga ttatctttct acg
//
LOCUS       DADMIB010000068        20253 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.068, whole genome shotgun sequence.
ACCESSION   DADMIB010000068 DADMIB010000000
VERSION     DADMIB010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20253
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.068"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(52..1079)
                     /locus_tag="JNZ89_002270"
                     /pseudo
     CDS             complement(52..1079)
                     /locus_tag="JNZ89_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phenylpropionate dioxygenase ferredoxin
                     reductase subunit"
     gene            complement(1089..1901)
                     /locus_tag="JNZ89_002271"
     CDS             complement(1089..1901)
                     /locus_tag="JNZ89_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate-dihydrodiol/cinnamic
                     acid-dihydrodiol dehydrogenase"
                     /protein_id="HAY8936136.1"
                     /translation="MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVA
                     SLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPA
                     ETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASK
                     HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAIL
                     PLQFFPQPADFTGPYVMLASRRNNRALSGVMINADAGLAIRGIRHVAAGLDL"
     gene            complement(1898..2218)
                     /locus_tag="JNZ89_002272"
     CDS             complement(1898..2218)
                     /locus_tag="JNZ89_002272"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-phenylpropionate/cinnamic acid
                     dioxygenase ferredoxin subunit"
                     /protein_id="HAY8936137.1"
                     /translation="MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSH
                     GNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGSDIFIDLP
                     EAQP"
     gene            complement(2218..2736)
                     /locus_tag="JNZ89_002273"
     CDS             complement(2218..2736)
                     /locus_tag="JNZ89_002273"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HAY8936138.1"
                     /translation="MSAQVSLELHLRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTM
                     RTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRPRHLISNC
                     QISETDIPNVFAVRVNYLLYQAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ
                     AVITSHNLSVLF"
     gene            complement(2733..4094)
                     /locus_tag="JNZ89_002274"
     CDS             complement(2733..4094)
                     /locus_tag="JNZ89_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit alpha"
                     /protein_id="HAY8936139.1"
                     /translation="MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWL
                     FLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRA
                     FTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSA
                     PGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKSPAEQFASDQYHALFSH
                     ASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWV
                     DGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVE
                     VWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKL
                     CLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQE
                     VMK"
     gene            4230..5120
                     /gene="hcaR"
                     /locus_tag="JNZ89_002275"
     CDS             4230..5120
                     /gene="hcaR"
                     /locus_tag="JNZ89_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HcaR"
                     /protein_id="HAY8936140.1"
                     /translation="MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVG
                     VPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKTVQEDRQLTIGFVPSAEV
                     NLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELF
                     DEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNI
                     VQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEM
                     KPALRDFIAIVQERLASVTA"
     gene            5280..6419
                     /locus_tag="JNZ89_002276"
     CDS             5280..6419
                     /locus_tag="JNZ89_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HAY8936141.1"
                     /translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL
                     LGAGLVARFLGSLLIAPRVSDPSRLISALRVLAMMTLLFAVAFWAGAHVAWLMLVMIG
                     FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYQVIL
                     ALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVLQNWRFLACVCLLQGAH
                     AAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC
                     GVVRWGIMGATTALPWLIVVQILHCGTFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
                     MGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC"
     gene            complement(6411..7691)
                     /gene="csiE"
                     /locus_tag="JNZ89_002277"
     CDS             complement(6411..7691)
                     /gene="csiE"
                     /locus_tag="JNZ89_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase inducible protein CsiE"
                     /protein_id="HAY8936142.1"
                     /translation="MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDD
                     DIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI
                     TSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
                     LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML
                     RVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLF
                     AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN
                     DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP
                     YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA"
     gene            complement(7882..8736)
                     /locus_tag="JNZ89_002278"
     CDS             complement(7882..8736)
                     /locus_tag="JNZ89_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311427.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY8936143.1"
                     /translation="MALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP
                     DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLP
                     ERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGA
                     NILAVIGQDDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIP
                     LLLIHGKADHVIPWQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFI
                     LSALNPQN"
     gene            complement(8881..9684)
                     /gene="suhB"
                     /locus_tag="JNZ89_002279"
     CDS             complement(8881..9684)
                     /gene="suhB"
                     /locus_tag="JNZ89_002279"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HAY8936144.1"
                     /translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD
                     KAVEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS
                     IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
                     AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
                     LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR"
     gene            9803..10543
                     /gene="trmJ"
                     /locus_tag="JNZ89_002280"
     CDS             9803..10543
                     /gene="trmJ"
                     /locus_tag="JNZ89_002280"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HAY8936145.1"
                     /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
                     QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
                     EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
                     LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR
                     ARPESQELNILRGILASIEQQNKGNKAE"
     gene            10813..11301
                     /gene="iscR"
                     /locus_tag="JNZ89_002281"
     CDS             10813..11301
                     /gene="iscR"
                     /locus_tag="JNZ89_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HAY8936146.1"
                     /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
                     LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD
                     KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKL
                     RA"
     gene            11413..12627
                     /gene="iscS"
                     /locus_tag="JNZ89_002282"
     CDS             11413..12627
                     /gene="iscS"
                     /locus_tag="JNZ89_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311423.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HAY8936147.1"
                     /translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFG
                     WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
                     EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV
                     QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
                     RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR
                     LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
                     PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ
                     GVDLNSIEWAHH"
     gene            12655..13041
                     /gene="iscU"
                     /locus_tag="JNZ89_002283"
     CDS             12655..13041
                     /gene="iscU"
                     /locus_tag="JNZ89_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HAY8936148.1"
                     /translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ
                     IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLVEAQAIKNTDIAEELELPPV
                     KIHCSILAEDAIKAAIADYKSKREAK"
     gene            13058..13381
                     /gene="iscA"
                     /locus_tag="JNZ89_002284"
     CDS             13058..13381
                     /gene="iscA"
                     /locus_tag="JNZ89_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HAY8936149.1"
                     /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
                     VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG
                     ESFHV"
     gene            13477..13992
                     /gene="hscB"
                     /locus_tag="JNZ89_002285"
     CDS             13477..13992
                     /gene="hscB"
                     /locus_tag="JNZ89_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone HscB"
                     /protein_id="HAY8936150.1"
                     /translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ
                     LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL
                     DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSS
                     AEQLEEKLLDF"
     gene            14009..15859
                     /gene="hscA"
                     /locus_tag="JNZ89_002286"
     CDS             14009..15859
                     /gene="hscA"
                     /locus_tag="JNZ89_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HAY8936151.1"
                     /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
                     ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH
                     LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF
                     DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL
                     RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQADIPDRSDNRVQRELLDAAIAAKI
                     ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM
                     VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
                     PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS
                     LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE
                     IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDNAA
                     AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV"
     gene            15861..16196
                     /gene="fdx"
                     /locus_tag="JNZ89_002287"
     CDS             15861..16196
                     /gene="fdx"
                     /locus_tag="JNZ89_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HAY8936152.1"
                     /translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK
                     SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR
                     YTINHAREH"
     gene            16208..16408
                     /gene="iscX"
                     /locus_tag="JNZ89_002288"
     CDS             16208..16408
                     /gene="iscX"
                     /locus_tag="JNZ89_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004104502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HAY8936153.1"
                     /translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD
                     DPQASNEKILEAILLVWLDEAE"
     gene            16586..17869
                     /gene="pepB"
                     /locus_tag="JNZ89_002289"
     CDS             16586..17869
                     /gene="pepB"
                     /locus_tag="JNZ89_002289"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HAY8936154.1"
                     /translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI
                     QRAARKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDN
                     RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL
                     HTVGRASERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD
                     MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT
                     DAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLAS
                     ASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW
                     LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA"
     gene            18011..18787
                     /gene="sseB"
                     /locus_tag="JNZ89_002290"
     CDS             18011..18787
                     /gene="sseB"
                     /locus_tag="JNZ89_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708361.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
                     /protein_id="HAY8936155.1"
                     /translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGE
                     AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
                     FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTT
                     LFKTIKPVKRAFICSIKENEEAQPNLFIGIEADGDIEEIIQATGSVATDTLPGDEPID
                     ICQVKKGEKGISHFITEHIVPFYERRWGGFLRDFKQNRII"
     gene            complement(19280..20125)
                     /gene="sseA"
                     /locus_tag="JNZ89_002291"
     CDS             complement(19280..20125)
                     /gene="sseA"
                     /locus_tag="JNZ89_002291"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HAY8936156.1"
                     /translation="MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLN
                     GHIPGAVFFDIEALSDHTSPLPHMLPRPKTFAVAMRELGVNQDKHLIVYDEGNLFSAP
                     RAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAVFNPEAVVKVTDV
                     LLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDE
                     LDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP
                     VEPVK"
BASE COUNT         4826 a         5158 c         5514 g         4755 t
ORIGIN      
        1 tgatgccatt ctatttcagg aaggagtgtc cgttaaactc aggctacctc agtcatcgcc
       61 acgcatatcg ccaataaact gtaagttatc actgtactga tcgctccaga accacggcag
      121 tagcggtagc ggtagcccta acattgcggc agcggcaatt tgcgcctggt tattggcgtt
      181 ttcccagctt tcacagcggt gtagtgcacc attatcaaga cgagtgattg ccacatcgcc
      241 accggcaaag atcgcgggat cgcaggtgcg gcaagcctca tcaatgacaa tgccattggc
      301 agtatcaagg ttggcctcgc gagccagttg ctcgttggcg ctgataccaa taccgtaaat
      361 caccacatca gcctgaagcg tttccccact ttgcagcgtc agttctactt tttcaccatc
      421 gaccacatgt tcaatggcat tattgagcag aatgcgcaca ccagcctgct ggtggcgctg
      481 taaaagatag cgttgcacgg gcggtggtgc attacggccc atgacggttg ccgccagttc
      541 aatcactgtc accttacatc tgcgctgcgc tgcgctgcgc tgcgctgcgt ggcgctggca
      601 gccagttcca gaccaatagt tccggcaccg acaatcacga ctgaccgttc gggctgcaga
      661 acttctcgca gtctggcggc atcaccggca tggcgtaggg taaagcagcg ttctcccagt
      721 gcatcaagca acggcagcgg tcgagctgcc gcgccggttg ctataaaaag ctgatcccag
      781 tgccagcttt cgccgttggt taacactaac tctcgtgtgt cgcgacccag cgttttgatg
      841 gttacaccgg aatgcagatg aacattgttt tcctgccacc agttagcggg taacacctgc
      901 tgtaactgcg gggaatcttc cagcaacatg gatttcgaga gtggaggtcg ttcataagga
      961 agatgtcgct catcggaaaa cagatgcagc tcaccggtga acccttgctg gcgtagcgag
     1021 gccgcagcca ttgccgccgc ttgcacgcca ccgacaataa tgatcgtttt ttctttcatc
     1081 gtgcttcctt aaagatccag cccagccgct acgtggcgaa tgccgcgaat cgctaaaccc
     1141 gcatcagcgt tgatcatcac accgcttaat gcgcgattat tgcgccgcga tgccaacatc
     1201 acatacggcc ccgtaaaatc cgccggttgc gggaaaaatt gcagcggtaa aatggcggca
     1261 attttctccg gcgtcagaga ctgcattatc gaggtttcac tttgcccgag cgcctgtggg
     1321 ccgcgcaggt cgctggccat accacacggg ccgacgccat tcacccgcac tttcggtgcc
     1381 agttcataag ccagttggcg aataagtccg gttgcggcat gtttactggc ggtgtacagc
     1441 gggccaccgc cgccaggata ccaggcggca tttgacagtg tgaaaatcat gctgccttca
     1501 ctggcgatta acgccggagc gcaggctttt gcgcccagca ggtaaccgag tacgttgacg
     1561 ttaaacagct cgtggaagcc ggtttcgagc gtctctgcgg gagtattaac cagtgaggca
     1621 ttgtgatccc agatgcctgc attgccgata aaacaatcca gcttgccgga acgagtcagg
     1681 atctgatcga ccgcgcgttg ataatcggca taacaggtca cgttaccttc caccgccaga
     1741 atatgttcgc caaatcgctg acgcagactg gcgacttttg ccgccgacag ttccagcgtg
     1801 gcaacctgcg cgccttcttc gataaatcgc tcgaccagcg ccagccctaa tcccgatccg
     1861 ccgccggtaa taaaaatgga ctcgttatgc agatcgctca tggctgcgcc tccggtaagt
     1921 cgatgaaaat gtcactacct tcaacgtgta ctggataagt ggtgagcgga tcggtggcgg
     1981 gcaggcataa cgctttcccc gttttcaggc aaaaactggc ggcgtgtagc gggcactcca
     2041 ccgtggcgtc atcttccaga tacccttctg acatcgacgc attaccatgg ctgcaacgat
     2101 cgttaatggc ataaaactcg ccgccaacgt tgaacagggc gatgacgggc gaggtatcga
     2161 tccggagagc ctcaccctcc ggcacatccg caacgggaca cgcataaatt cgattcatca
     2221 gaacagtaca ctcaggttat gggaagtgat taccgcttga tccaggacga tatcccgttc
     2281 cagcaagcgc cagttgtcat cttccagacg gcgaactttg tcgaaacgcg ttccaacata
     2341 gaatgtttca tcgcgctctt tttgtgcctg ataaagcaga taatttaccc gcacagcaaa
     2401 tacgtttggg atgtcggttt cgcttatctg gcagttgctg attaagtgac gggggcgtga
     2461 cggcggctct tctgcccagg ccatgcccgt ttccagacgg gcgattcgcc gctccagctg
     2521 gtctttggtg tcattaaaaa tccaggttgt cggtggctgg acgcctttgc ggcggtcgcg
     2581 tgtttgcgcg ttaactgtgg tgcgcatggt gtaacgaatc tcttcgtcga gctgcgccag
     2641 ccagtcacga aatttccagt cgtccagtaa gctggcttcg tgaaagagaa actggctaat
     2701 gcggagatgt aactctagtg aaacttgcgc actcatttca tcacctcctg ctggtaagcg
     2761 gcggttttat cgagcacttc ctgccagctt tcgctactca gaagatcggc ccagcgttgg
     2821 tacattccac gagcggcagt ttctgaaaag atatagttag taatgccagg aatgccgtcg
     2881 tcgcggcgct tttcctgacc aagccccatt tccagacaca gtttgctgtt gcgggcgcgg
     2941 tggcctttaa gcaatttctg gatttcacac cagttctccg agtcatcctg ctcgagaaaa
     3001 ccagcaggac caaaagcacg agtggcgctg ttttcaaaag cggctttaac ttcatcggag
     3061 gcggctttgt cagtaataca gaacgcccac acttcaactt gatcagggcc gcgcggatgc
     3121 cagacgcgga gtgtggcagt gccgtttagc catgaaagcg tggggaatat attgttatga
     3181 cccgccaggc gcagggcgcg aacttcacct aaacgttgtt ctgcttcggc ataggtttcg
     3241 cggtaatagc tggaaaccgc gccatcgacc cagacattag catccggttt ttcagtaaag
     3301 aagaaaccgc taccgtgacc gtcctgacca aattgcagcg catctttggc ggtttcccac
     3361 accgggcggg cggtttgtcc atcaccgaga cgcttatcgc tgccatcatc tttcgcccct
     3421 aatacctgaa cggcagaagc atggctgaac agagcatgat attggtcact ggcgaactgc
     3481 tctgccgggg atttccagtt acagttgatc acccactttt gtacgccgcc gacaatttcg
     3541 gtgccgcctt cgcgacgatc cagcatgcca tccagatacc aggcaatgtc accaaggtaa
     3601 tcacgcaggc ccggtgcgct ggtatcccag ttgccaaaaa tcagcccttt ataactctcc
     3661 acacaaggaa cttcgtttag cccccagtgg gatttacaca acccttgtgg gtaggcgcga
     3721 ggttccagcg gtacatcgat caactcgccg ttaatgccat aagaccagcc gtgatacggg
     3781 caggtaaagg cgcgagtgtt gccgcaatct gcataactca cacgcatggc ccggtggcgg
     3841 cattggttga gaaacgcctt gatgctgccg tctttctgac gcactacgac aaccgcatct
     3901 tctcccatgt aggtgttaaa gaaatcaccg ggttttggga tctggctttc gtgggcgaga
     3961 aatagccagc aacgaccgaa aatacgctca agctccagtt ggtaaatatc cgggtcggta
     4021 taaatacgcg gagtgacccg accattttgg gtgtcaatca gttggtaaat gttcaaatct
     4081 gagggtgtgg tcatattttt taatcctgaa agataagatg tattgacctt ctatttttgt
     4141 gccataagga tgttgctggt tggttgctaa tatgtgaaat agttaatttc taccagctga
     4201 gacgtttttt cgataacaag gggaaggtga tggaactacg gcatttacgc tatttcgtcg
     4261 cagtggcgca ggcactgaac tttacccgtg cggcggaaaa actgcatacc tcacagcctt
     4321 cgttaagcag ccagatccgc gatcttgaaa actgtgtcgg tgttccgtta ctggtgaggg
     4381 ataagcgcaa agtcgcgttg acggcggcgg gagaatgttt tctccaggac gcgctggcaa
     4441 tcctcgaaca agcggaaaat gccaaattac gggcgcggaa aactgttcag gaagacagac
     4501 aattaaccat tggctttgtg ccatcggcgg aagtgaattt actgccaaaa gtattaccga
     4561 tgtttcgtct cagacagcca gacaccttga ttgagctggt gagtttaatc accacgcaac
     4621 aggaggaaaa aattcgccgt ggtgaactcg acgtcggctt aatgcgccat cctgtttata
     4681 gcccggagat tgattatctg gagctttttg acgaaccatt agtggttgtg ttaccggttg
     4741 atcacccttt agcacatgaa aaagagatca ccgccgcgca actggatggc gtgaatttcg
     4801 tcagtaccga tccggcgtat tccggttcgc ttgcgccgat cgttaaagcg tggtttgcgc
     4861 aagaaaacag ccagccaaat atcgtccagg tggcaacgaa tattctggtg accatgaatc
     4921 tggtgggcat ggggctgggc gtcactttga tacccggtta tatgaataat tttaataccg
     4981 gacaggttgt ttttcgtccc attgccggaa atgtgccttc cattgcttta ctgatggcgt
     5041 ggaagaaagg ggagatgaag ccggcattac gcgatttcat cgccattgtg caggaacgtt
     5101 tggcaagcgt aacggcataa ttacgcatta tttttgcaac atgcgtcgcg gatcgcagtt
     5161 ttttagtgct tgtgaactgg cgttacagac atcgggaagc aggctcgaat attcttattt
     5221 ttcaacttgc accaacattc gattaacccc agactaacgc ctcctgacgg gagggactca
     5281 tggttttgca atccacgcgc tggttggcgc tcggctattt cacatacttt tttagttacg
     5341 gcatttttct acctttctgg agcgtctggc ttaaagggat tggtttaacg ccagaaacca
     5401 tcggcctgtt attgggggca ggtctggttg cccgttttct cgggagtttg ctcatcgcgc
     5461 cccgcgtcag cgatccttct cgcctgattt ccgccttgcg cgtgctggca atgatgacac
     5521 ttctctttgc tgtcgccttc tgggcggggg cgcacgtagc gtggctgatg ctggtgatga
     5581 ttggctttaa cctctttttc tcaccgctgg taccgttgac cgatgcactg gcgaatacgt
     5641 ggcaaaagca gttcccgctt gattacggca aagtgcgact gtggggctcg gtggcgtttg
     5701 tcattggctc ggcgctgacg ggcaaactgg tcactatgtt tgattatcag gtgatcctcg
     5761 cgctgttaac attgggcgtg gcatccatgc tgctcggctt tctcatccgt ccgacgattc
     5821 agccacaagg ggcaagccgc cagcaggaga gcaccggttg gtcagcgtgg ttggcgctgg
     5881 ttcttcagaa ctggcgcttt ctggcctgcg tttgtttatt gcagggggca catgcggcct
     5941 attacggttt tagcgccatt tactggcagg cagctggcta ctcggcctcg gcggtggggt
     6001 atttgtggtc gctgggcgtg gtggcggaag tcattatctt tgcgctgagt aataaacttt
     6061 tccgccgttg tagtgcacgc gatatgctgt tgatctcggc gatttgcggc gtagtgcgct
     6121 ggggcattat gggagcaact acggcgttgc cgtggttgat agtggtgcaa attctgcatt
     6181 gcggcacctt cacggtctgc cacctggccg ccatgcgcta tattgccgct cgccagggta
     6241 gcgaagtcat ccgtttacag gcggtttact ctgccgtcgc gatgggcggc agtatagcta
     6301 tcatgaccgt tttcgccggt ttcctgtatc aatatctggg ccacggcgtg ttctgggtaa
     6361 tggcgctggt ggcgcttccg gcaatgtttt tgcgcccgaa agttgttccc tcatgctgat
     6421 tcgagcattt tgcggatctg ctcctgttga tgtgttgtca gtgtcaggtc cgtatagatc
     6481 agcggtggtg aaaagagcgg taacggcatg gtataaggcg caataatcag tgccgcgccg
     6541 cgcggagcgc ctgtctgcaa aaatgccttt accgacatat gtttaatgtt gagcggcagt
     6601 aacgttagtt cgcgtaactg ctgctcaatc tgcgcttctc gctcgctatc attcccggta
     6661 agaagaataa tctgtttttc atgcagatcg ttttcctgca ttagccaggc accgaaaatc
     6721 accgcgacca gaccactttc ctcatcagaa agatggacgc cgtattcact ttcaaatccg
     6781 gccagcgccg cgcgggtggt gcgcaccagg cgtgggtaca gtctggcgaa ctcttctggc
     6841 agggtattat caataccgat ggcaaacaaa ctgcgattta acgcctgggc gaggtgggta
     6901 taaagctgat cgcataaccc ctgttcatca taaaaacgaa catttcccag ctcacgaaaa
     6961 tggtttacca gacgtttgat agactgacgc aattgtctgt ctcgctgatg cgcatcacgc
     7021 aatggatcgg gaacccgcaa catggaaaaa agtaatgcca taaacagtgg ctcatcaggc
     7081 ggtacaggct ggagcgcccg acgctgccag tggcgtccaa tttcctgcgc tacctgaaat
     7141 tcaaggcagg attccgccca gcgacgttgg agcggattaa actgaggcgt aattccagcg
     7201 tggtgttgca gcaaacaata ttgcagatac agacacagga aatgaatatc gcgcgtttca
     7261 aagcgttttt gcagccgtcg ggagcagaga ttcactaacg cttgtagatt ggtatcgtcg
     7321 taaaagttac gcgcaattcc gcgccgcttc agttcactct tcagggcggg ggtgaattgg
     7381 ctggtaataa atgacggaca cagacggaaa ccacgtcgta gccagtgaaa taaacacaaa
     7441 cgttggttaa gcactgtacc ttcaacccgg tagctaccgt cataaccagt cgtcagtgtg
     7501 agttgatgat agcgcaggat ctcccgtcct gtttcgctga tatcaagact ggcaatatca
     7561 tcatccacac cattaagctc gctgaaggtt gccatggtgg cggtcaaccc cggctgaaag
     7621 agcgtcagca agatctggca gcggcgctgg ggagccgaaa ggacagatgg tggagcaagc
     7681 gtaggcatca tctgtagatc tcccataagc ataattgata agaatagcta aagtttgctc
     7741 aggtaaatgg cgaagggaat gctaatcatc agaaatgttg gcaagcgtca cagaattttt
     7801 ctcatcttaa actgttctga ccagtggatt agcatgtctt aaggtggttt tgtgaatgat
     7861 tatcgtgcta gcgatcatgg gttagttctg cggattcaac gcgctaagga taaagtccac
     7921 catctgttcg cgataaacat cgccgtgacg atcggaaaaa gcatcaatgt gttcgccatc
     7981 cgggattagg atcaaccgtt ttgtctcttt tgccaggcta tacaactttt cgctgtgctg
     8041 ccatgggata acgtgatcag ctttaccgtg aatgagtaaa agcgggatcg ggctgacgct
     8101 ggcgatataa ttttcgccgc tgtaactctc atcaagtaag tagccactgc cggggatcat
     8161 ctgattggcg atggttgcat aagaggcaaa tgtggagtcg aggatcaccg cacgtatgcc
     8221 ttcacgatca tcctgaccaa taacagcaag aatattcgcc ccgccaatac tctgcccgaa
     8281 cagcaccagc cgttgtgggt ttacatcact gcgatggcgc accacattga tggcactttg
     8341 cgtatcgtcc agcaatccgg cctgggacgg cgtgcctttt gatttaccaa acccgcgata
     8401 atcaaacata aaaacgttga aattacgctc gggtaaccaa ctgaccagcg gccagtgggc
     8461 ggacatattt ccggcattgc cgtgagcatg aatgatggtt gcgatggcat tgtcagcagg
     8521 gcccgtcgaa gaaggaataa accagccttg cagacgagta ccgtccttag ccgtaaattc
     8581 gacggattcc gccgaccagg ggtcgggacc gtaaatttta tcgtcaggat aatagaagaa
     8641 gttgatggca acgcgcggca ctaaataaac gcagaaggca acaacaaaga gaataaacag
     8701 aattttgaga acgcgtttgt tcactggcag cgccataacc tttccttgtg acttctttat
     8761 catccattaa tcggggaaag atggtgggag agtgacgaaa gaaagtaaag cggtgaggaa
     8821 gtatttcgga atagcgcctg aaaggcgagg gcgggtgagt gacatcaccc gcctgagtca
     8881 ttaacgcttc agagcgtcgc ttaactcatc acgcatgttc gccagcatgg ctttcacaac
     8941 acgcgggtta ccagcaacga tgttaccggt cagcatatag ttatgaccac cggtgaagtc
     9001 gctgacgatg ccgcccgctt cacgaaccag cagctcgcct gccgcgaaat cccacggacg
     9061 cagaccgatt tcaaagaaac cgtcaacacg acccgcagcg acgtaagcca gatccagcgc
     9121 cgcagaaccg gtacgacgga agtctgcaca ttcgttgaac agtttgccga cgatgttgat
     9181 gtaggtagtg gcgtactgtt ttgctttgaa cgggaagccg gtcgccagaa tggtaccgtc
     9241 gagatcgcga gcggtgctac cgcgcagacg gtagccgttc agctgtgcgc cctgaccgcg
     9301 agtggcggtg aacagttcgt tacgcatagg atcgtatacc acagcaactt cggtgcggcc
     9361 tttgatacga acggcgatag ataccgcgaa gtgcggcaga cgtttgataa agttggtagt
     9421 accatccagt ggatcgataa cccattgaac atcctgatca gtaccttcaa gttcaccgct
     9481 ttcttcggtg atgatggtgt gctgtgggta agatttacga atcgtgtcga taatcaccgc
     9541 ttcgacagct ttatctacgt tggtcacgaa atcgttactg cctttctggc tcgcttctac
     9601 agcgtccggg gtttcatagt ttttggcaat taaattaccc gccttgcgcg ctgcgcgcac
     9661 ggcgatgttc agcatcggat gcatcggtct ctctcactgg atgttaaaga acgggaaaac
     9721 ggcgcagagt atagcagcga gatcggcatc tgtcttcgtt ttatgataag atgcgtgaat
     9781 aatctttaga tgaagaaaga caatgctgca aaatattcga attgtgctgg tggagacgtc
     9841 acacaccggc aatatgggtt ctgttgcccg tgccatgaaa acaatgggat taaccaatct
     9901 gtggctggtt aatccactgg tgaaacccga ctcccaggcg attgccctgg cagcaggggc
     9961 cagcgatgtg attggtaatg ctcacatcgt cgatacgctc gacgaagcgt tagccggttg
    10021 tagcttggtg gtgggcacca gcgcacgttc ccgcacgctg ccatggccga tgctcgaccc
    10081 gcgcgaatgc ggcctgaaaa gcgtcgctga agcggcaaat accccggtgg cgctggtgtt
    10141 tggtcgcgag cgcgtcggct tgaccaatga agagttgcag aaatgccatt atcatgtcgc
    10201 gattgcggct aacccggaat acagctcgct gaacctggcg atggcggttc aggttattgc
    10261 ctatgaagtg cgcatggcct ggctggcaac tcaggaaaac ggcgagcagg tcgagcatga
    10321 agagacgccg tatccgctgg tcgatgatct ggagcgtttt tatggtcatc tggaacaaac
    10381 gctgctggca accggtttta tccgtgaaaa ccatccgggg caggtgatga ataaattgcg
    10441 ccgtctgttt acccgtgcgc gcccggaaag ccaggaattg aatatcctgc gcgggattct
    10501 ggcttctatt gagcagcaga ataaaggtaa caaggccgaa taacagtagt tgcctgatgc
    10561 gacgcttaac gcgtcttatc aggcctacaa tgtacagaac cgtaggtcgg ataaggtgtt
    10621 cacaccgcat ccgacaacag gtacaaacgc cacgataaaa aaatggcact gaaggttaaa
    10681 tacccgacta aatcagtcaa gtaaatagtt gaccaattta ctcgggaatg tcagacttga
    10741 ccctgctatt caataccccc acttttacaa taaaaaaccc cgggcagggg cgagtttgag
    10801 gtgaagtaag acatgagact gacatctaaa gggcgctatg ccgtgaccgc aatgcttgac
    10861 gttgcgctca actctgaagc gggcccggta ccgttggctg atatttccga acgtcagggc
    10921 atttcccttt cttatctgga acaactgttt tcccgtctgc gtaaaaatgg tctggtttcc
    10981 agcgtacgtg gaccaggcgg tggttatctg ttaggcaaag atgccagcag catcgccgtt
    11041 ggcgaagtga ttagcgccgt tgacgaatct gtagatgcca cccgttgtca gggtaaaggc
    11101 ggctgccagg gcggcgataa atgcctgacc cacgcgctgt ggcgtgattt gagcgaccgt
    11161 ctcaccggtt ttctcaacaa cattacttta ggcgaactgg ttaataacca ggaagtgctg
    11221 gatgtgtctg gtcgtcagca tactcacgac gcgccacgca cccgcacaca agacgcgatc
    11281 gacgttaagt tacgcgctta ataaaaagaa ttcagaatca ggccggagtg ctaaatactc
    11341 cgtaaacacg gtcgtacatc cagccggtag cctgattcct tgcattgagt gatgtacgga
    11401 gtttatagag caatgaaatt accgatttat ctcgactact ccgcaaccac gccggtggac
    11461 ccgcgtgttg ccgagaaaat gatgcagttc atgacgatgg acggaacctt tggtaacccg
    11521 gcctctcgtt ctcaccgttt cggctggcag gctgaagaag cggtagatat cgcccgtaat
    11581 cagattgccg atctggtcgg cgctgatccg cgtgaaatcg tctttacctc tggtgcaacc
    11641 gaatctgaca acctggcgat caaaggtgca gccaactttt atcagaaaaa aggcaagcac
    11701 atcatcacta gcaaaaccga acacaaagcg gtactggata cctgccgtca gctggagcgc
    11761 gaaggttttg aagtcaccta cctggcaccg cagcgtaacg gcattatcga cctgaaagaa
    11821 cttgaagcag cgatgcgtga cgacaccatc cttgtttcca tcatgcacgt aaataacgaa
    11881 atcggcgtgg tgcaggatat cgcggctatc ggcgaaatgt gccgtgctcg tggcattatc
    11941 tatcacgttg atgcaaccca gagcgtgggc aaactgccta tcgacctgag ccagttgaaa
    12001 gttgacctga tgtctttctc cggtcacaaa atctatggcc cgaaaggtat cggtgcgctg
    12061 tatgtacgtc gtaaaccgcg cgtacgcatc gaagcgcaaa tgcacggcgg cggtcacgag
    12121 cgcggtatgc gttccggcac tctgcctgtt caccagatcg tcggaatggg cgaggcctat
    12181 cgcatcgcaa aagaagagat ggcgaccgag atggaacgtc tgcgcggcct gcgtaaccgt
    12241 ctgtggaacg gcatcaaaga tatcgaagaa gtttacctga acggtgacct ggaacacggt
    12301 gcgccgaaca ttctcaacgt cagcttcaac tacgttgaag gtgagtcgct gattatggcg
    12361 ctgaaagacc tcgcagtttc ttcaggttcc gcctgtacgt cagcaagcct cgaaccgtcc
    12421 tacgtgctgc gcgcgctggg gctgaacgac gagctggcac atagctctat ccgtttctct
    12481 ttaggtcgtt ttactactga agaagagatc gactacacca tcgagttagt tcgtaaatcc
    12541 atcggtcgtc tgcgtgacct ttctccgctg tgggaaatgt acaagcaggg cgtggatctg
    12601 aacagcatcg aatgggctca tcattaatcg gtatcggaat caggagaatt tataatggct
    12661 tacagcgaaa aagttatcga ccattacgag aatccgcgta acgtgggttc ctttgacaac
    12721 aacgacgaga acgtcggcag cggcatggtg ggtgcaccgg cctgtggcga cgtgatgaag
    12781 ttgcagatta aagtcaacga tgaaggtatc attgaagacg cgcgttttaa aacttacggc
    12841 tgcggttctg ctatcgcttc cagctccctg gtcaccgaat gggtgaaagg gaagtctctc
    12901 gtcgaagcgc aggcgatcaa aaacaccgat attgctgaag aacttgaact gccgccggtg
    12961 aaaattcact gttctattct ggcagaagac gcgatcaaag ccgccattgc ggactataaa
    13021 agcaaacgtg aagcaaaata agagttgagg tttggttatg tcgattacac tgagcgacag
    13081 tgcagcagcg cgagtaaata cctttctggc taaccgcggc aaagggtttg gcctgcgtct
    13141 gggcgtgaga acctccggat gttcaggtat ggcttatgta ctggaatttg ttgacgaacc
    13201 gacgccggaa gacatcgtgt ttgaagacaa aggcgtgaaa gtcgtggtcg atggcaaaag
    13261 cctgcaattt ctggacggta cgcagctgga cttcgtaaaa gaaggcctga atgaagggtt
    13321 taaattcacc aacccgaacg ttaaagatga gtgtggttgc ggcgaaagct tccacgtttg
    13381 atgcgcatac cgataacccc accgtggtcg cctgcgcgtg gggtttgttt tacctgattc
    13441 gccgttatcg cggcggatcg cagccctgag aatgttatgg attacttcac cctctttggc
    13501 ttgcctgccc gttatcaact cgatacccag gcactgagcc tgcgttttca ggatctacaa
    13561 cgtcagtatc atcctgataa attcgccagc ggaagccagg cggaacaact cgccgccgta
    13621 cagcaatctg caaccattaa ccaggcctgg caaacgctgc gtcatccgtt aatgcgcgcg
    13681 gaatatttgc tttctttgca cggttttgat ctcgccagcg agcagcatac tgtgcgcgac
    13741 accgcgttcc tgatggaaca gctggagctg cgcgaagaac tggacgagat cgaacaggcg
    13801 aaagatgaag cgcggctgga aagctttatc aaacgtgtga aaaagatgtt tgatacccgc
    13861 catcagttga tggttgaaca gttagacaac gagacgtggg acgcggcggc ggataccgtg
    13921 cgtaagctgc gttttctcga taaactgcga agcagtgccg aacaactcga agaaaaactg
    13981 ctcgattttt aatttctgga agctaaacat ggccttatta caaattagtg aacctggttt
    14041 gagtgctgcg ccgcatcagc gtcgtctggc ggccggtatt gacctgggca caaccaactc
    14101 gctggtagcg acagtgcgca gcggtcaggc cgaaacgtta gccgaccatg aaggccgtca
    14161 cctgctgcca tctgttgttc actatcaaca gcaagggcat tcggtgggtt atgacgcgcg
    14221 tactaacgca gcgctcgata ccgccaacac cattagttct gttaaacgcc tgatgggacg
    14281 ctcgctggct gatatccagc aacgctatcc gcatttgcct tatcaattcc aggccagcga
    14341 aaacggcctg ccaatgattg aaacggcggc ggggctgctg aacccggtgc gcgtttctgc
    14401 ggacatcctc aaagcactgg cggcgcgggc aactgaagcc ctggcaggcg agctggatgg
    14461 tgtcgttatc accgttccgg cgtactttga cgatgcccag cgtcagggca ccaaagacgc
    14521 ggcgcgtctg gcggggttgc atgttctgcg cttacttaac gaaccgaccg ctgcggctat
    14581 cgcctacggg ctggattccg gtcaggaagg cgtgatcgcc gtttatgacc tcggtggcgg
    14641 gacgtttgat atttccattc tgcgcttaag tcgcggcgtg tttgaagtgc tggcaaccgg
    14701 cggtgattcc gcgctcggcg gcgatgattt cgaccatctg ctggcggatt acattcgcga
    14761 gcaggcggac attcctgatc gtagcgataa ccgcgttcag cgtgaactgc tggatgccgc
    14821 cattgcagcc aaaatcgcgc tgagcgatgc ggactccgtg accgttaacg ttgcgggctg
    14881 gcagggcgaa atcagccgtg aacaattcaa tgaactgatc gcgccactgg taaaacgaac
    14941 cttactggct tgtcgtcgtg cgctgaaaga cgcgggcgta gaagctgatg aagtgctgga
    15001 agtggtgatg gttggcggtt ctactcgcgt gccgctggtg cgtgaacggg taggcgaatt
    15061 tttcggtcgt ccaccgctga cttccatcga cccggataaa gtcgtcgcta ttggcgcggc
    15121 gattcaggcg gatattctgg tgggtaacaa gccggacagc gaaatgctgc tgcttgatgt
    15181 gatcccactg tcgctgggcc tcgaaacgat gggcggcctg gtggagaaag tgattccgcg
    15241 taataccact attccggtgg cccgcgctca ggatttcacc acctttaaag atggtcagac
    15301 ggcgatgtct atccatgtaa tgcagggtga gcgcgaactg gtgcaggact gccgctcact
    15361 ggcgcgtttt gcgctgcgtg gtattccggc gctaccggct ggcggtgcgc atattcgcgt
    15421 gacgttccag gtcgatgccg acggtctttt gagcgtgacg gcgatggaga aatccaccgg
    15481 cgttgaggcg tctattcagg tcaaaccttc ttacggtctg accgatagcg aaatcgcttc
    15541 gatgatcaaa gattcaatga gctatgccga gcaggacgta aaagcccgta tgctggcaga
    15601 acaaaaagta gaagcggcgc gtgtgctgga aagtctgcac ggcgcgctgg ctgctgatgc
    15661 cgcgctgtta agcgccgcag agcgtcaggt cattgacaat gctgccgctc acctgagtga
    15721 agtggctcag ggcgatgatg ttgacgccat cgaacaagcg attaaaaacg tagacaaaca
    15781 aacccaggat ttcgccgctc gccgcatgga ccagtcggtt cgtcgtgcgc tgaaaggcca
    15841 ttccgtggac gaggtttaat atgccaaaga ttgttatttt gcctcatcag gacctctgcc
    15901 ctgatggcgc tgttctggaa gctaatagcg gtgaaaccat tctcgacgca gcgctgcgta
    15961 acggtatcga gattgaacac gcctgtgaaa aatcctgtgc ttgcaccacc tgccactgca
    16021 tcgttcgtga aggttttgac tcgctgccag aaagctcaga gcaggaagac gacatgctgg
    16081 acaaagcctg gggactggag cccgaaagcc gtttaagctg ccaggcacgc gttaccgacg
    16141 aagatttagt agtcgaaatc ccgcgttaca ctatcaacca tgcgcgtgag cattaacaga
    16201 ggttagtatg ggacttaagt ggaccgatag ccgcgaaatt ggcgaagcac tgtacgatgc
    16261 gtatcctgat cttgatccga aaacggttcg attcaccgat atgcatcagt ggatttgcga
    16321 tctggaagat ttcgacgacg acccgcaggc atccaacgag aaaatcctcg aagcgatttt
    16381 gttagtctgg ctggacgagg ccgaataatt tccgcgtcat gcttcacgcc gcagatgcgt
    16441 tggctgcgct cgttcacccc agtcacatag ttatctatgc tcctggggct tcactcactt
    16501 gccgccttcc tgcaacgcga atcatttagc ggaaaaatcc tggggctgcc aactggcggc
    16561 ccttttacaa agaaggataa ctaaaatgac agaagcgatg aagattaccc tctctaccca
    16621 acctgccgac gcgcgctggg gagaaaaagc aacttacagc attaataatg acggcattac
    16681 cctgcatttg aacggggcag acgatctggg gctgatccag cgtgcggcgc gcaagattga
    16741 cggtctgggc atcaagcatg ttcagttaag cggtgaaggc tgggatgcgg atcgctgctg
    16801 ggcattctgg caaggttaca aagccccgaa aggcacgcgt aaagtggagt ggccggatct
    16861 ggacgatgcc cagcgccagg aactggataa ccgcctgatg atcatcgact gggtgcgtga
    16921 caccatcaac gcaccggcag aagaattggg accatcgcaa ctggcacagc gtgctgttga
    16981 tctgatcagc aacgtcgcgg gcgatcgtgt gacttatcgg atcaccaaag gcgaagatct
    17041 gcgtgagcaa ggttatatgg ggctgcacac cgtcggacgc gcttcagaac gttctccggt
    17101 attgctggcg ctggattaca acccaactgg cgataaagaa gcgccagtgt acgcgtgcct
    17161 ggtaggtaaa ggtatcactt ttgactccgg cggctacagc atcaaacaga ctgcgtttat
    17221 ggactcgatg aagtcggaca tgggcggcgc ggcaacggtt accggggcgc tggcatttgc
    17281 cattacgcgc ggactgaaca agcgcgtgaa gctgttcctc tgctgtgcgg ataacctgat
    17341 tagcggcaat gcgttcaagc tgggcgatat catcacctat cgcaacggta aaaaagttga
    17401 agtgatgaac actgatgccg aagggcgtct ggtgcttgcc gatggtctga ttgatgccag
    17461 tgcgcagaaa ccggaaatga tcattgatgc ggcgaccctc accggggcgg cgaaaactgc
    17521 gctgggtaat gattatcacg cgctgttcag ttttgacgat gcgcttgccg gtcgtttgct
    17581 ggcgagtgcc tcacaagaga acgaaccatt ctggcgtctg ccgctggcgg aattccaccg
    17641 cagccagctg ccgtctaact ttgccgaact gaacaatacc ggaagcgcgg cgtatccggc
    17701 aggcgcgagc acggcggcgg gcttcctgtc gcactttgtt gagaactatc agcaaggctg
    17761 gctgcatatc gactgctcgg cgacttaccg taaagcgccg gttgaacagt ggtctgcggg
    17821 cgctacggga cttggtgtgc gcacgatagc taatctgtta acggcgtaaa ctaatatgcc
    17881 ggatgcggcg taaacgcctt atccggccta caaattctgc aaattcaaca aattgcgaat
    17941 cccttgtagg cctgataagc gtagcgcatc aggcatttgc gccccgaacg ttgaatgaat
    18001 tgtggttctt atgtccgaaa caaaaaacga acttgaagac ctgctggaaa aagcagcaac
    18061 cgaaccggca caccgcccgg cctttttccg tactctactg gaatccaccg tctgggtgcc
    18121 tggtacggcg gcgcagggcg aggctgtggt tgaagatagt gcgcttgatt tacagcactg
    18181 ggaaaaagaa gacggcacca gcgtcattcc ttttttcacc tcgttagaag cgcttcaaca
    18241 ggcggttgaa gacgaacagg catttgtcgt aatgcccgtt cgcacattgt ttgagatgac
    18301 ccttggcgaa acgctcttcc ttaatgccaa actgccgacc ggtaaagaat ttatgccgcg
    18361 tgaaatcagt ttgttgattg gtgaagaggg aaatccgctg agcagccagg aaatcctgga
    18421 aggcggtgaa tcgctgatat tatcggaagt tgcagagccg ccagcacaaa tgattgattc
    18481 actcaccacc ttatttaaaa ccattaagcc ggtgaagcgt gcttttattt gttcaattaa
    18541 agagaacgaa gaggcacagc ctaatttatt tattggcatt gaagccgatg gtgatatcga
    18601 agaaattatt caggcgacgg gaagtgtagc gaccgataca ttacctggcg atgaaccaat
    18661 cgatatttgt caggtgaaaa aaggggaaaa aggaattagc cactttatta ccgaacatat
    18721 tgtgccattc tatgaacgtc gctggggagg ttttttgcgt gactttaaac aaaaccggat
    18781 aatctaaaat atgccgccct aaagggcggc attcgggctt acttgctgct ctgaaggttg
    18841 ttaaccacca gtaaattgtc gccggagaga ctccggttat tatttacttg ggaaaacagc
    18901 gcaccagaaa caataagtac gatacagaag caccgtatct tcattgtgcg gtccatgcga
    18961 agaccgcatc acgacagcac cactggcgat attgccgtta gagcaagcgc tgagacgcgc
    19021 ttgctctaac ggtcgcggaa catcctttcc ttaagccagc gcccgcttgc gagacggcgg
    19081 aaagggccgc agtggataat atactaacag aacaataata actctctttt gcttgacaaa
    19141 aagagagtta ctggcgagta ttgtctccgc tgagacgcgc ttgcattact acggtaatac
    19201 aacctgctgg aaaggccgcg aaccagacca gcaataaaaa accgccaaat tcggcggttt
    19261 tttattgcct gtaaaatact tatttcactg gctcaaccgg taaatctgcc cgcgcgcccc
    19321 attcactcca tgcgccgtcg tacagtttca cgtttggcac atccagcgtc gcgagtgcta
    19381 acaaaaccac ggctgccgtt acaccagagc cgcagctgac gataattggt ttgtcgtagc
    19441 tgacgccgcg accaaaaaat atcgcatcca gttcatcggt cgtttttagt tcgccttcgc
    19501 gcaccagttc cgtccacggc acattcagtg ctccgggaat atgtccgcga cgtaaacctg
    19561 ggcgaggttc atcaacttct gcgttaaaac gtgcagccgg gcgggcatca ataatttgcg
    19621 ccgtattttc atggcttgcc aataatacat cggttacttt caccacggct tcaggattaa
    19681 acacggcgtt aaactctcct tccggcagct ctactgcacc ttcttctaac agcagatcat
    19741 cgcgctgcca gcctgcaagt ccacccccca gaatcgacac tttctctaca ccaaaggtgc
    19801 gcagcatcca ccatgctcgt ggggctgaga aaagattacc ttcgtcatag acaatcaggt
    19861 gcttatcctg gttaacgcct aattcacgca tcgccacggc gaacgttttc gggcgcggca
    19921 gcatgtgcgg aagcggggaa gtgtgatcag aaagcgcttc gatatcaaaa aacactgcgc
    19981 cgggaatatg tccattcaga tactcctgag caacgttacg atcttcctgt ccaggcgacg
    20041 ccatgcgggc atcgataatc tgaatttccg ggtcatcaat atgttcggcg agccagtcgg
    20101 ctcctacaaa ccatgtcgtg gacataggca tctccatttt tgccggggtt aggctaaatt
    20161 gtcggatgtt tagtgaaaag cgacaagcga aagaggctga tttggctgtc tgagccacaa
    20221 ttctcactaa aattcggatt gtatgggcgt gat
//
LOCUS       DADMIB010000069        19964 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.069, whole genome shotgun sequence.
ACCESSION   DADMIB010000069 DADMIB010000000
VERSION     DADMIB010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19964
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.069"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..246
                     /locus_tag="JNZ89_002292"
     CDS             <1..246
                     /locus_tag="JNZ89_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY8936157.1"
                     /translation="DQIGFRLKEHVLETLRGATSCEGKGWDKVTNPDAIIIDTFQVVR
                     QDVSGFSPVLTVNMRAASKSEPQTVVNASYSVTGFNL"
     gene            243..650
                     /locus_tag="JNZ89_002293"
     CDS             243..650
                     /locus_tag="JNZ89_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2509 family protein"
                     /protein_id="HAY8936158.1"
                     /translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS
                     LRRQAIVQSALAWGKMHSWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSL
                     WRTGEVIDGNIVFSPSGWSDFCPLKERALCQLP"
     gene            635..958
                     /locus_tag="JNZ89_002294"
     CDS             635..958
                     /locus_tag="JNZ89_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HAY8936159.1"
                     /translation="MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASR
                     NQYQQLWRHGWQQTQLRAISPPANWQVNRLQTSQAGCVSISVTLVSPGGREGEMTRLH
                     CPNRQ"
     gene            971..4339
                     /gene="recC"
                     /locus_tag="JNZ89_002295"
     CDS             971..4339
                     /gene="recC"
                     /locus_tag="JNZ89_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HAY8936160.1"
                     /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
                     WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
                     LEHEDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGE
                     AQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
                     LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
                     FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
                     LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
                     LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
                     LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRLWVNESGIRWGIDD
                     DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
                     LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
                     GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
                     GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGLSIQDNS
                     ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE
                     RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
                     FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
                     IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL
                     SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
                     MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDNI
                     WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
     gene            4515..7403
                     /gene="ptrA"
                     /locus_tag="JNZ89_002296"
     CDS             4515..7403
                     /gene="ptrA"
                     /locus_tag="JNZ89_002296"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HAY8936161.1"
                     /translation="MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQY
                     QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
                     QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
                     RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
                     KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKTEITVPVVTDAQKG
                     IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
                     GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
                     ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
                     PQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIP
                     DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQ
                     VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY
                     FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
                     TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTQARDVQKQLGADGSEWCRNKDVVVD
                     KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
                     YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTTEAKLRAMKPDEFAQIQQ
                     AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
                     EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE"
     gene            7396..10938
                     /gene="recB"
                     /locus_tag="JNZ89_002297"
     CDS             7396..10938
                     /gene="recB"
                     /locus_tag="JNZ89_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HAY8936162.1"
                     /translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
                     GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
                     EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
                     YQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL
                     ASRHAQIVARIATVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEE
                     TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAE
                     IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
                     QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
                     PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
                     CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
                     VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
                     ALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
                     RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
                     IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPKSVDLAEVERLAED
                     LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
                     IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
                     GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
                     VQEKLELGGFESQWEPVLTEWITAVLQAPLNEKGVSLSQLSDRDKQVEMEFYLPISEP
                     LIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
                     DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIYLFLRGV
                     DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
     gene            10938..12764
                     /locus_tag="JNZ89_002298"
     CDS             10938..12764
                     /locus_tag="JNZ89_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecBCD enzyme subunit RecD"
                     /protein_id="HAY8936163.1"
                     /translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
                     DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
                     CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
                     ALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
                     ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
                     PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTG
                     THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
                     IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
                     VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
                     RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
                     YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
     gene            complement(12826..14157)
                     /gene="argA"
                     /locus_tag="JNZ89_002299"
     CDS             complement(12826..14157)
                     /gene="argA"
                     /locus_tag="JNZ89_002299"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HAY8936164.1"
                     /translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
                     IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG
                     TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
                     IHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
                     GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
                     LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
                     DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQS
                     GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
     gene            14389..15642
                     /locus_tag="JNZ89_002300"
     CDS             14389..15642
                     /locus_tag="JNZ89_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HAY8936165.1"
                     /translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA
                     SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR
                     VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED
                     YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI
                     ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG
                     SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
                     FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ
                     QEVAESILAGIKAYFADGATLARRG"
     gene            15902..16081
                     /locus_tag="JNZ89_002301"
     CDS             15902..16081
                     /locus_tag="JNZ89_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HAY8936166.1"
                     /translation="MIIEKVMNNNCVQASVNGQEVIISGPGVGYNKNMVCRSLSILQT
                     GFFMSEMSKKINSTN"
     gene            16006..16725
                     /locus_tag="JNZ89_002302"
     CDS             16006..16725
                     /locus_tag="JNZ89_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HAY8936167.1"
                     /translation="MSVPEHPANRIFYVRNEQKNKLYKLIEHVGIEYIFVAEKIVHYA
                     ESNLEKKLNPSLLLILADHISNAISRVVSGIQINNVFLEEIKALYKAEYAISRDALTI
                     INEQFSVQLPDDEIGFIALHILNNYENSVDYESVRIIELSQKITELIEVVYNRRVDRS
                     SFNYSRFMMHLKYFSSRVLCNEKIKQKNIGDIYEQFLEKDFQLQRAIHEIERYLYATF
                     KYDLILEEKLYLSIRIKVLMD"
     gene            16757..18337
                     /locus_tag="JNZ89_002303"
                     /pseudo
     CDS             16757..18337
                     /locus_tag="JNZ89_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031400.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
     gene            18337..19545
                     /locus_tag="JNZ89_002304"
     CDS             18337..19545
                     /locus_tag="JNZ89_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000382418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative C-S lyase"
                     /protein_id="HAY8936168.1"
                     /translation="MDIFNTSISRKGTYCTQWDFCEDRFGVKDVLPFSISDMDLPIQE
                     AIIRTLKKRLEHPILGYSRWQHDDYLNSIVNWYHQQYKTEIQPEWITYSPSVMYSISK
                     AIEILTLNGDNILIFTPVYNAFFDVIKHNGRNMLTTSLMKENGRGYVINWQDFELKIK
                     SAKMVLLCNPHNPTGTVWSEDDLHRIAACCARHNIWLCSDEIHSDFVFNHSFTSALTI
                     KDDKVVVFNSISKTFNVPALTGSYMISTDDNFNHKFRTISRYRDFVNSPSVLNVIATI
                     VAYNECEEWLKSLKVHIASNIQFTLQYLNENIPELIVWPAEGCYFSWVDCSALGYPFD
                     KFYRRLINEGRVGIMAGHVYGTEGEGYLRLNLACSREKLYMGLARLASVIKNINQEKE
                     NEQYGSYPSY"
     gene            19514..>19964
                     /locus_tag="JNZ89_002305"
     CDS             19514..>19964
                     /locus_tag="JNZ89_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003843858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HAY8936169.1"
                     /translation="MNNTDLIHLIKRFMRNEHKAVEEVIDSPLSEVANLIKILQSCQG
                     KVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGE
                     TAEILATLPSLKKMGNYLISFIRSHHSSLAISCDLSVEIPVKSEADNL"
BASE COUNT         4945 a         4651 c         5329 g         5039 t
ORIGIN      
        1 gaccagattg gatttcgtct gaaggagcat gtgctggaaa cgctacgcgg tgcgacatcc
       61 tgtgaaggta agggctggga taaagtcact aatccggatg ccatcattat cgacactttt
      121 caggtcgtac gtcaggatgt cagcggcttc tcgccggtgt tgacggttaa tatgcgtgct
      181 gccagtaagt ctgaaccgca aaccgtggtg aatgccagct atagcgtgac aggattcaac
      241 ctgtgaaccg cgaaaagggt gtttcgtcac tggctctggt cctgatgctg ctggttttgg
      301 gtagtttgct attacaagga atgagccaac aggatcgcag ttttgcctct cgcgtgagca
      361 tggaaagtca gtcattgcgc cgccaggcca tcgttcagtc ggcgctggcg tggggaaaaa
      421 tgcactcctg gcagacgcag ccagcagttc agtgctcgca gtacgctgaa accgatgccc
      481 aggtttgttt gcgtttactg gcagataatg aagccttatt gattgccggt tatgaaggcg
      541 tttcgttgtg gcgaacaggc gaagtcattg atggaaacat tgttttttcg ccaagcggct
      601 ggagcgattt ttgtccgctg aaagagaggg cgttatgtca gcttccctga agaatcaaca
      661 aggctttagc ctgccggagg taatgttggc gatggtgttg atggtgatga ttgtcactgc
      721 gttatcgggt ttccagcgaa cattgatgaa cagtcttgcc agcagaaacc agtaccaaca
      781 gctctggcgg catggctggc agcaaacgca actgcgcgcg atttcgccac cagctaactg
      841 gcaggtcaac cgattgcaga catcgcaggc gggatgtgtc agcatcagcg ttacgctagt
      901 ttcacccggg ggcagagaag gcgagatgac ccgcctgcat tgcccgaatc gtcagtagtc
      961 aggagccgct atgttaaggg tctaccattc caatcgtctg gacgtgctgg aagcgttgat
     1021 ggagtttatt gtcgaacgcg aacggctgga cgatcctttc gaaccagaga tgattctggt
     1081 gcaaagtacc ggtatggcac agtggctgca aatgaccctg tcgcaaaagt ttggtattgc
     1141 ggcaaacatt gattttccgc tgcctgcgag ctttatctgg gatatgttcg tccgggtgtt
     1201 accggagatc cccaaagaga gcgcctttaa caaacagagc atgagctgga aactgatgac
     1261 tctgctgccg caactgttgg agcacgaaga ctttaccctg ttgcggcatt atctgactga
     1321 cgatagcgac aagcgaaaac tgttccagct ttcctcaaaa gcggcggacc tgtttgacca
     1381 gtatctggtc tatcgcccgg agtggctggc acaatgggaa acaggacatt tggttgaagg
     1441 gctgggagaa gcacaggcct ggcaagcgcc gttgtggaag gcgctggtgg aatataccca
     1501 tgaactcgga caaccgcgct ggcaccgcgc gaatctctat cagcgcttta tcgaaacgct
     1561 ggagtccgcg acgacctgcc cgccggggtt accttcgcgc gtctttatat gcggtatttc
     1621 cgcgttaccg cctgtttatc tccaggcgct ccaggcgctg ggtaaacata ttgaaatcca
     1681 tctcctgttt accaacccct gccgttatta ctggggcgat attaaagatc ctgcttatct
     1741 ggcgaaactg ctgactcgtc agcgtcgaca cagttttgaa gatcgcgaat tgccgctatt
     1801 tcgcgatagc gaaaatgccg gacagctctt taacagcgat ggtgaacagg atgtcggcaa
     1861 cccgctgctg gcctcatggg ggaagcttgg gcgcgactac atttatctcc tttctgacct
     1921 ggagagcagc caggagctgg acgcctttgt cgatgtcacg ccagataacc tgctgcataa
     1981 cattcagtct gacattctgg aactggaaaa ccgtgccgtt gctggtgtga acatcgaaga
     2041 gttttcccgt agcgataaca aacgcccgct tgatccactg gatagcagta tcaccttcca
     2101 cgtttgccat agcccgcagc gtgaagttga agttttgcac gatcgcctgc tggcgatgct
     2161 ggaagaagac ccgacactta ctccgcgcga catcatcgtg atggtggctg atatcgacag
     2221 ctacagtccg tttattcagg ctgtgtttgg tagcgcacct gcggatcgtt acctgcctta
     2281 cgccatttcc gaccgtcggg cgcggcagtc gcatccggta ctggaagcgt ttatcagcct
     2341 gttatcgttg ccagacagcc gctttgtgtc ggaagacgtg ctggcattac tggatgtgcc
     2401 ggtgctggcg gcgcggtttg acatcaccga agaagggctg cgttatttac gcctgtgggt
     2461 caacgaatcc ggcattcgtt gggggataga tgacgacaac gttcgcgagc tggaactccc
     2521 cgccaccgga caacacacct ggcgatttgg cctgacgcgt atgttgctgg gctacgcgat
     2581 ggagagcgcg cagggcgagt ggcaatcggt tctaccttat gatgagtcga gcggcttaat
     2641 tgcagaactg gtggggcatc tggcttcact gctaatgcag ctaaacatct ggcgtcgcgg
     2701 gctggcacag gagcgtccgc tagaagagtg gttgccggtt tgtcgcgata tgctcaacgc
     2761 cttcttcctg ccggatgcgg aaaccgaagc ggcgatgacg ctgatcgaac aacaatggca
     2821 ggcgattatc gccgaaggtt taggggcgca gtatggcgac gcggtgccgc tgtcactatt
     2881 gcgtgatgaa ctggcacagc gtctggatca agaacgtatc agccagcgtt ttctcgccgg
     2941 accggttaac atttgtactc tgatgccaat gcgttcaatt ccgttcaaag tggtttgcct
     3001 gctgggaatg aacgacggcg tttatccacg tcagcttgcg ccattgggct ttgacctgat
     3061 gagccagaaa ccgaagcgtg gcgaccgtag ccgtcgcgat gacgaccgct acctgttcct
     3121 ggaagcgtta atttccgcgc agcaaaaact ctatatcagt tatatcgggc tttccattca
     3181 ggataacagt gaacgtttcc cgtcggtact ggtgcaggaa ctgatcgact acatcgggca
     3241 aagtcattat ctaccgggcg atgaagcgct caactgtgat gaaagcgagg caagggtaaa
     3301 agcgcatctt acctgcctcc atacccggat gccgtttgat ccacaaaact accagccagg
     3361 cgaacgacaa agctatgctc gtgaatggct acctgcggcc agccaggctg gtaaagcaca
     3421 ttctgaattt gttcagccgc tgccgtttac cttaccggaa accgtgccgc tggaaacgct
     3481 acaacgattc tgggcacatc cggtgcgggc atttttccag atgcgtttgc aggtgaactt
     3541 ccgtaccgaa gacagcgaaa tccccgacac cgagccattt attctggaag ggcttagccg
     3601 ttatcaaatc aatcagcagt tattgaatgc actggttgag caggatgatg ccgaacgctt
     3661 gttccgtcgc ttccgggcgg caggggattt accgtatggc gcttttggtg aaattttctg
     3721 ggaaactcag tgccaggaga tgcagcagct tgccgacaga gtcattgcct gtcgccagcc
     3781 ggggcagagt atggaaattg atctcgcctg caacggtgtg cagataactg gctggttgcc
     3841 gcaggtgcag ccggatggcc tgttgcgctg gcgtccctct ttattaagtg tggcgcaggg
     3901 aatgcaactt tggctggaac accttgtcta ctgtgccagc ggtggtaatg gtgaaagtcg
     3961 cctttttcta cgcaaagacg gcgagtggcg ttttccgccg cttgcagccg aacaggcttt
     4021 gcattacctc tcacaactga ttgaggggta tcgtgaaggg atgtccgcgc cattgctggt
     4081 gttacctgaa agtggcggcg cgtggctaaa aacctgttat gacgcgcaaa acgatgccat
     4141 gctggatgac gattccacgt tgcaaaaagc ccgtacgaaa ttccttcagg cttacgaagg
     4201 caacatgatg gtgcgtggcg aaggtgataa tatctggtat caaaggctct ggcggcaatt
     4261 aacaccagag acaatggagg ccatcgttga acagtcgcaa cgtttcctgt taccgctgtt
     4321 tcgctttaat cagtcatgag tgctgtataa aaattgcgca atctatccgc ttactttatg
     4381 atgcgcacca gtcacggact gatggttata taaacatagg ctgactcgtg cagcacaaga
     4441 ttaaattctg gcagatgatt tgcgttaacg tgttgaatct ggacagaaaa ttaagttgat
     4501 tatgaggtcc gtgaatgccc cgcagcactt ggttcaaagc attattgttg ttagttgccc
     4561 tttgggcacc cttaagtcag gcagaaacgg gatggcagcc gattcaggaa accatccgta
     4621 aaagtgataa agataaccgc cagtatcagg ctatacgtct ggataacggt atggtggtct
     4681 tgctggtttc tgatccgcag gcagttaaat cgctctcggc gctggtggtg cccgttgggt
     4741 cgctggaaga tcccgaggcg taccaggggc tggcacatta ccttgaacat atgagtctga
     4801 tggggtcgaa aaagtacccg caggctgaca gtctggccga atatctcaaa atgcacggcg
     4861 gtagtcacaa tgccagcact gcgccgtatc gcacggcttt ctatctggaa gttgagaacg
     4921 acgccttgcc tggtgcggta gaccgcctgg ccgatgctat tgctgaacct ttgctcgaca
     4981 agaaatatgc cgaacgtgag cgtaatgcgg tgaacgctga attaaccatg gcgcgtacgc
     5041 gtgacgggat gcgcatggca caggtcagcg cagaaaccat taacccggca caccccggtt
     5101 caaagttttc tggtggtaac ctcgaaactt taagcgataa acctggtaat ccggtgcagc
     5161 aggcgctgaa agatttccac gagaagtact attccgccaa tctgatgaag gcggttattt
     5221 acagcaataa accgctgccg gagttggcaa aaatggcggc ggacaccttt ggtcgcgtgc
     5281 cgaacaaaga gagcaaaaaa acggaaatca ccgtgccggt agtcaccgac gcgcaaaagg
     5341 gcattatcat tcattacgtc ccggcactgc cgcgtaaagt tctgcgcgtt gagtttcgca
     5401 tcgataacaa ctcagcgaag ttccgtagta aaacggatga attgattacc tatctgattg
     5461 gtaatcgcag cccaggtaca ctttccgact ggctgcaaaa gcagggatta gttgagggca
     5521 ttagcgccaa ctccgatcct atcgtcaacg gcaacagcgg cgtattagcg atctctgcgt
     5581 ctttaaccga taaaggcctg gctaatcgcg atcaggttgt ggcggcaatt tttagctatc
     5641 tcaatctgtt acgtgaaaaa ggcattgata aacaatactt cgatgaactg gcgaatgtgc
     5701 tggatatcga cttccgttat ccgtcgatca cccgtgatat ggattacgtc gaatggctgg
     5761 cagataccat gattcgcgtt ccggttgagc atacgctgga tgcagtcaat attgccgatc
     5821 ggtacgatgc taaagcagta aaagaacgtc tggcgatgat gacgccgcag aatgcgcgta
     5881 tctggtatat cagcccgaaa gagccgcaca ataaaacggc ttattttgtc gatgcgccgt
     5941 atcaggtcga taaaatcagc gaacaaactt tcgctgactg gcagcaaaaa gctgccaata
     6001 ttgcgctctc cttaccggag cttaacccct atattcctga cgatttctcg ctgattaagt
     6061 cagagaagaa atatgaccat ccagagctga ttgttgatga gtcgaatctg cgcgtggtgt
     6121 atgcgccaag ccgttatttt tccagcgaac ccaaagctga tgtcagcctg attttgcgta
     6181 atccgaaagc catggacagc gcccgcaatc aggtgatgtt tgcgctcaat gattatctcg
     6241 cagggctggc gcttgatcag ttaagcaacc aggcgtcggt tggtggcata agtttttcca
     6301 ccaacgctaa caacggcctt atggttaatg ctaatggtta cacccagcgt ctgccgcagc
     6361 tgttccaggc attgctcgag gggtacttta gctataccgc tacggaagat cagcttgagc
     6421 aggcgaagtc ttggtataac cagatgatgg attccgcaga aaagggtaaa gcgtttgagc
     6481 aggcgattat gcccgcgcag atgctctcgc aagtgccgta cttctcgcga gatgaacggc
     6541 gtaaaatttt gccctccatt acgttgaaag aggtgctggc ctatcgcgac gccttaaaat
     6601 caggggctcg accagagttt atggttatcg gcaacatgac cgaggcccag gcaacaacgc
     6661 aggcacgcga tgtgcaaaaa cagttgggcg ctgatggttc agagtggtgt cgaaacaaag
     6721 atgtagtggt cgataaaaaa caatccgtca tctttgaaaa agccggtaac agcaccgact
     6781 ccgcactggc agcggtattt gtaccgactg gctacgatga atacaccagc tcagcctata
     6841 gctctctgtt ggggcagatc gtacagccgt ggttctacaa tcagttgcgt accgaagaac
     6901 aattgggcta tgccgtgttt gcgtttccaa tgagcgtggg gcgtcagtgg ggcatgggct
     6961 tccttttgca aagcaatgat aaacagcctt cattcttgtg ggagcgttac aaggcgtttt
     7021 tcccaaccac agaggcaaaa ttgcgagcga tgaagccaga tgagtttgcg caaatccagc
     7081 aggcggtaat tacccagatg ctgcaggcac cgcaaacgct cggcgaagaa gcatcgaagt
     7141 taagtaaaga tttcgatcgc ggcaatatgc gcttcgattc gcgtgataaa atcgtggccc
     7201 agataaaact gctgacgccg caaaaacttg ctgatttctt ccatcaggcg gtggtcgagc
     7261 cgcaaggcat ggctattctg tcgcagattt ccggcagcca gaacgggaaa gccgaatatg
     7321 tacaccctga aggctggaaa gtgtgggaga acgtcagcgc gttgcagcaa acaatgcccc
     7381 tgatgagtga aaagaatgag tgatgtcgcc gagacactag atcctttgcg cttgccctta
     7441 cagggtgagc gcctgattga agcctctgcc ggcacaggca aaacctttac gattgcggcg
     7501 ctctatttgc gcctgttact tggactaggc ggttccgccg cctttccccg cccgctgacc
     7561 gttgaagaac tgctggtggt cacctttacc gaggctgcca cggcagaatt gcgtggtcgt
     7621 atccgtagca atatccatga gttgcgcatc gcctgtctgc gtgaaactac cgacaatcca
     7681 ctgtacgaac gtctgctgga agagatcgac gataaagcgc aagccgcgca gtggttgttg
     7741 ttagccgaac ggcagatgga tgaagcggca gtctttacta ttcacggttt ttgccagcgc
     7801 atgctcaacc tgaatgcctt tgaatccggc atgctgtttg agcagcagct gattgaagat
     7861 gagtctctgc tacgttacca ggcctgcgcc gatttctggc gtcgccactg ctacccgctg
     7921 ccgcgtgaaa tagcccaggt cgtctttgaa acctggaaag ggccgcaggc gttgctgcgc
     7981 gatattaatc gttatctgca aggcgaagcg ccggttatca aagcaccgcc gcccgatgat
     8041 gaaacgctgg cttcccgcca cgcgcaaatt gtggcgcgta ttgctacggt aaaacagcag
     8101 tggcgcgacg cagtgggtga actggatgcg ctgatcgaat cttctggtat tgatcgacgc
     8161 aagtttaacc gtagcaatca ggctaaatgg atcgacaaga tcagcgcctg ggcagaagaa
     8221 gagaccaaca gttatcagtt gccggagtcg ctggaaaaat tctcccagcg tttcttagaa
     8281 gatcgcacga aagctggggg ggaaaccccg cgacatccac tgtttgaggc gatcgatcaa
     8341 ctgcttgcag aaccattgtc gatccgcgat ctggtgatca cccgcgcatt ggctgagatc
     8401 cgcgaaacag tagcgcgtga aaaacgccgc cgtggcgaat tgggttttga tgacatgtta
     8461 agtcggctcg attccgcgct gcgtagcgaa agcggtgagg tgttggcagc ggcgatccgt
     8521 acgcgattcc cggtggcaat gatcgatgaa tttcaggata ccgaccccca gcagtaccga
     8581 atttttcgcc gtatctggca ccatcagccg gaaaccgcat tgttgctgat tggcgacccg
     8641 aagcaggcca tatatgcatt ccggggtgcg gatatcttca cttatatgaa ggcgcgtagt
     8701 gaagttcacg cccactacac tttagacacc aactggcgct ccgcacctgg aatggtgaac
     8761 agtgtgaaca agcttttcag ccagactgat gacgcgttca tgtttcgcga aataccgttt
     8821 attccagtga aatcagccgg gaaaaatcag gcgttacgtt ttgtatttaa aggtgaaacg
     8881 cagcctgcga tgaaaatgtg gctgatggaa ggcgaaagct gcggcgttgg cgactatcaa
     8941 agtaccatgg cgcaggtatg tgctgcgcaa atccgcgact ggctacaagc cggacagcgg
     9001 ggcgaagcgt tgctgatgaa cggcgacgac gcgcgtccgg tgcgtgcttc ggacatcagt
     9061 gtgctggtgc gcagccgcca ggaggccgcc caggtgcgcg atgccttaac gttgctggaa
     9121 atcccttccg tttacctttc gaaccgcgac agtgtttttg aaactctgga agcgcaggaa
     9181 atgctttggt tattgcaggc ggtgatgacg cccgaacgtg agaacaccct gcgtagtgcg
     9241 ctggcaacgt caatgatggg gctgaacgcg ctggatatcg aaacgctgaa taatgacgaa
     9301 catgcgtggg atgcggtagt tgaagagttc gatggttatc ggcaaatctg gcgcaaacgt
     9361 ggcgttatgc cgatgctgcg ggcgctgatg tcggcgcgta acattgcaga aaacttgctg
     9421 gcaacggcag gcggtgagcg gcgtcttacc gatatcttgc atatcagcga actgctacaa
     9481 gaagccggaa cgcagctgga aagtgaacat gcgctggtac gctggttatc gcaacatatc
     9541 ctcgagccag acagtaatgc ctccagccaa caaatgcgcc tcgaaagtga taaacatctg
     9601 gtgcagattg tcacgatcca taaatcgaaa gggctggaat atccgctggt ctggttgcca
     9661 tttattacca atttccgcgt ccaggatcag gcgttttatc acgatcgcca ctcgtttgag
     9721 gcagttttgg atcttaatgc tgcgccaaaa agcgtcgacc tcgcggaggt cgaacgtctg
     9781 gcggaagatc tgcgtttgct ttacgtggcg ctgacgcgtt cggtttggca ttgcagtctc
     9841 ggcgttgcac cgctggtgcg ccgtcgtggc gataaaaaag gtgacaccga cgtccaccaa
     9901 agtgcgctcg ggcgtttgct gcaaaaaggg gaaccgcaag atgcggcagg gcttcgcacc
     9961 tgtattgaag cgttatgcga tgatgatatt gcctggcaaa cggcacaaac tggtgataac
    10021 cagccctggc aggttaatga tgctttaact gcagaactga atgcgaggac actacaacga
    10081 ttgcccggcg ataactggcg tgtcaccagc tactccggct tgcagcagcg tggtcacggt
    10141 atcgctcagg atctgatgcc acggctggat gttgatgccg caggcgtggt cagcgtcgtt
    10201 gaagaaccga cgttaacacc gcatcagttc ccgcgcggtg cgtcaccggg gacattcttg
    10261 cacagtttgt ttgaagacct cgattttacc cagccggttg acccgaactg ggtacaggaa
    10321 aaactggaac tcggcggctt tgaatcgcag tgggaaccgg tgttgaccga gtggatcacg
    10381 gctgtcctcc aggcacctct caatgaaaag ggggttagcc tgagtcagct ttccgaccgc
    10441 gataaacagg tggagatgga gttttacctg ccgattagcg aaccgctcat cgctagccag
    10501 cttgatgcac taattcgcca gtttgatccg ctatccgctg gctgcccgcc gctggagttc
    10561 atgcaggtac gcggcatgtt aaaaggcttt atcgacctag tattccgcca cgaagggcgt
    10621 tattacctgc tcgactataa atccaactgg ctgggtgaag acagttcggc ttacacccaa
    10681 caggctatgg cagcagcgat gcaggcacac cgctatgatc tgcaatatca gctttatacc
    10741 ctggcgctgc atcgttatct gcgccatcgc attgctgatt acgactatga tcgtcacttt
    10801 ggcggcgtta tctatctgtt cctgcgtggc gttgataaag aacatccgca acaagggatt
    10861 tacacaaccc gacccaacgc cgggttgatt gccctgatgg atgagatgtt tgccggtatg
    10921 accctggagg aggcgtaatg aaattgcaaa agcaattact ggaagctgtg gagcacaaac
    10981 agctacgccc gctggatgtg caatttgccc tgaccgtggc gggagatgaa catcctgccg
    11041 tcaccctcgc ggcggcactg ttaagtcatg atgccggaga gggacacgtc tgtttgccgc
    11101 tttcacgact ggaaaataac gaggcgtcgc atccgctgtt ggcgacctgt gtcagtgaaa
    11161 tcggtgagct acaaaattgg gaagaatgct tgctggcttc tcaagcggtc agcaggggag
    11221 atgaacccac gccgatgatc ctctgtggcg atcgtcttta tttgaatcgc atgtggtgta
    11281 acgagcggac ggtagcgcgc ttcttcaatg aggtgaatca tgccattgag gttgatgaag
    11341 ctctactggc gcaaaccctg gacaaacttt ttccagtaag cgatgaaatt aactggcaaa
    11401 aagttgcagc ggcagtggcg ctgacgcggc ggatctcggt gatttccggc ggcccaggca
    11461 ccggtaaaac gaccaccgtg gcgaagttgc tggcagcgtt aattcaaatg gccgacggcg
    11521 aacgctgccg tatccgtctg gctgcaccaa cgggtaaagc tgccgcgcgc ttaaccgaat
    11581 ctctcggcaa ggctttgcga cagttaccgc tgaccgatga acaaaagaaa cgcattccgg
    11641 aagatgccag cactttgcac cgattgctgg gcgcgcagcc gggtagccag cgtttacgtc
    11701 atcatgccgg taacccgctg catcttgatg tgctggtggt agatgaagcg tcaatgatcg
    11761 atctgcctat gatgtcgaga ctgatcgacg ccttgcccga tcatgcgcga gtgatctttc
    11821 tcggcgatcg tgatcaactg gcctcggttg aggctggggc tgtgctgggc gatatctgcg
    11881 cttatgccaa cgcgggcttt accgccgagc gtgccaggca gctaagccgc ctgacgggga
    11941 ctcacgttcc ggcaggaacc ggcacagaag cggcatcttt gcgcgacagt ctctgcctgc
    12001 tgcaaaaaag ctatcgtttc ggcagcgatt ctggcattgg tcagttagct gcggcgatca
    12061 accgtggtga taaaacggca gtgaaaaccg tttttcagca ggattttact gatatcgaaa
    12121 aacgactttt acagagcggc gaagattata ttgcgatgct tgaggaagct cttgcgggtt
    12181 atggacgtta tctggatctg ctgcaagcgc gtgccgagcc ggatttaatc attcaggcgt
    12241 tcaatgagta ccaacttttg tgcgccctgc gggaagggcc gtttggcgtg gctggactga
    12301 atgagcgaat tgagcagttt atgcaacaga agcgcaaaat tcatcgtcat ccgcactctc
    12361 gttggtacga aggtcgaccg gtgatgattg cccgtaatga cagcgcgctt gggttgttta
    12421 atggcgatat cggtattgcg ctggatcgcg ggcaggggac gcgcgtctgg tttgcgatgc
    12481 cggacggcaa tattaagtct gtgcaaccga gtcgcttgcc agagcacgaa actacgtggg
    12541 cgatgacggt acataaatcg cagggatcgg agttcgacca tgcggcgttg attttaccga
    12601 gccaacgcac gccggtagta acgcgagagc tggtatacac cgcggtgacc cgcgcgcgtc
    12661 gccgtctgtc gctgtatgcc gatgagcgta tattaagtgc ggcaatcgcc actcgtactg
    12721 agcggcgcag tggtctggcg gcgttgttta gttcgcggga ataaacgtaa ttgccggatg
    12781 cgacgcacga gtgttacgca tgtcgcatcc gacaattttc atcgcttacc ctaaatccgc
    12841 catcaacact ttggatttac gctggtagtt gtacaactgc tttttgctct cgggcagtaa
    12901 atcaatatcc accggggtaa atccacgttc ctggaaccag tgaatactgc gcgtggtcag
    12961 cacaaacaat ttgcttaagc cgctctgctt cgcctgagcg gcaatgcgtt ccagcagaac
    13021 ctcgccccgt gatgaactgc ggtaatccgg gtgaactgcc acacaggcca tttccccaat
    13081 cttctcttcc gggaacggat agagcgcggc gcaggcaata gtcgtgttat cgcgctgaat
    13141 aatggtgaat ttgtcgattt ccatctccag ctgctcgcga gaacggcgca ccagaatacc
    13201 ttgctgctcc agcgggcgaa tcaactccag aataccgcca atatcgttga ttgttgcgcg
    13261 acgaatctgc tcggcgcttt ccatcacaat ctgcgtaccg ataccgtcgc gtgagaacaa
    13321 ctcttgcaac agcgcgccat cttcctgata actgattaaa tgacagcgac gcacgccgct
    13381 gcggcaggct ttcactgcgc cacgcaaaaa gcgcaccgta ccggagttgt aatcgccttt
    13441 ctcttcctgg gcttctaccc gcgcttgcgc ttcgttaggg aaaagttctg agacaatatc
    13501 accgtcgtca ttagtgacgc cctgtgaaga gcaaaaacca atcatcttct cagctttcag
    13561 tttgatggcc agttgagtgg caatctcttc cgaggtcaga ttaaagctct cgccagtgac
    13621 tgaaacagcg accggcccca ttagcactat tgcaccgctg tccagttgac gatggatcgc
    13681 gtcttcatca atccgccgga tacgcccgct atggcagtaa tccacgccgt catcgacgcc
    13741 cagcggctgg gcaataataa aattgccact gacgacgttg atatgcgcgc cctgtagcgg
    13801 cgtgttattg agactcatcg acaggcgagc agtgatgtcc agttgcaatg ttcccgcagc
    13861 ctgcttcacc agttccagtg ttttggcgtc ggtcacacgt atattcttgt gatacagcgg
    13921 ttcgtggtga tgcgcggcca gatttgcgtc gatctgcgga cgtgcgccat agaccaccac
    13981 cagacggatg ccgaggctgt gcaacaaccc gatatcatta acgatactgg agaaattctc
    14041 atgctcaatg gcttcaccgc cgagcatgat gacaaacgtt tttccccggt gggtattgat
    14101 atagggaacc gaatggcgga atccctcgac cagctcggtt ttacgttcct ttaccacggc
    14161 acaccccttt gcatgattat tctaaattag tgtattttta ttctgttttt tcgcagggtg
    14221 caagtgtaaa ttttatgcga gagcgacttt tttatcagta atgccgtgaa tataaaaaga
    14281 atgtttaccg tttattagat gacagattat gcgtctttcg ctaaagtttc cggtcaaatt
    14341 agtcgtttac ttgttacaca gcttagattt cttttgctcg ggagaggcat gtcaggatcc
    14401 aacactgcaa tcagccgtcg tcgtttactg caaggcgcgg gtgccatgtg gctattgagc
    14461 gtaagtcagg tcagtctggc tgcggtcagc caggtcgtgg cggtgcgcgt ctggcctgcg
    14521 tccagctaca cccgtgtgac ggtagaatca aatcgtcagc tgaaatataa gcagttcgcg
    14581 ttgagtaacc ctgaacgcgt ggtggtggat atcgaagatg taaacctgaa ctcggtactc
    14641 aaggggatgg cggcacaaat tcgtgcagac gacccgttca tcaagtcggc gcgcgtcggg
    14701 caatttgacc cgcagaccgt acggatggtt tttgaattaa agcaaaacgt aaaaccgcag
    14761 ctgtttgccc ttgcgccggt cgccgggttt aaagagcgtc tggtgatgga cctctatccg
    14821 gccaatgcac aggatatgca ggacccgctg ctggcgctgc tggaggatta caacaaaggc
    14881 gacctcgaaa agcaggtgcc gccagcacaa agtggtccac aaccgggtaa agcagggcgc
    14941 gatcgtccta ttgttattat gcttgaccct ggccacggcg gcgaagactc cggtgcggtg
    15001 gggaaataca aaacgcgcga aaaagacgtg gtattgcaaa tagctcgccg tctgcgctct
    15061 ctgatcgaga aagagggcaa tatgaaggtg tacatgacgc gcaatgaaga catcttcatt
    15121 ccgttgcaag tgcgcgtagc aaaagcccag aaacagcgtg ctgacctgtt tgtctctatc
    15181 catgccgacg cctttaccag tcgtcagccg agcggttcct ctgtgtttgc gctctcaacc
    15241 aaaggtgcaa ccagtactgc ggcaaaatat ctggcacaaa cccagaacgc ctcggacttg
    15301 attggtggcg tgagcaaaag cggtgaccgc tatgtcgacc acaccatgtt cgatatggtg
    15361 cagtcgctga ccattgccga cagcctgaag tttggtaaag cggtactgaa taagctcggt
    15421 aaaatcaaca agctgcataa aaatcaagtt gaacaggccg ggtttgccgt actaaaggca
    15481 ccagatattc cctccattct ggtcgaaacg gcgtttatta gtaacgttga ggaagagcgt
    15541 aaactgaaaa cggcgacttt ccagcaggaa gttgcggagt ctattcttgc ggggattaaa
    15601 gcgtattttg ccgatggggc gacgctggcg agaaggggat gatgttttta atttattcaa
    15661 tgaatttatg tttcattgaa taaatattat ttacataaat gttgaacgat ggttttgtga
    15721 ctgctgtcga atatttgaat atcggcttaa aaaataagtc tgtcatctct tttattaagc
    15781 acaattccgt gtaaggtata cgcattagtt aattatcttg caactgttaa atcaggcaag
    15841 gcaatgtttg aagtaattat tacttctgac atgccttgcc ttttttttgg ggagccatgg
    15901 aatgatcatc gaaaaagtca tgaacaataa ttgtgtacag gcatcggtga acggacagga
    15961 ggttatcatt tctgggcctg gcgttggtta caataaaaat atggtatgtc ggtccctgag
    16021 catcctgcaa accggatttt ttatgtcaga aatgagcaaa aaaataaact ctacaaattg
    16081 attgagcatg tgggtattga gtatattttt gttgccgaaa agatagtgca ttatgcggag
    16141 agtaatctcg aaaaaaaact caatccatcg ctactactga ttcttgctga tcacatttcg
    16201 aatgcaatat cccgagtcgt ctcaggcata caaattaata atgttttcct tgaggaaatc
    16261 aaagcgttgt acaaagcaga gtatgcaata agtcgtgatg cattaacaat cattaatgag
    16321 caatttagcg ttcaactacc ggatgatgag attggtttta tagcattgca tattttaaat
    16381 aattatgaaa attcagttga ttatgaatca gtaaggatta ttgagctgtc tcaaaaaatc
    16441 acggagctta ttgaagttgt ttataacaga agggtggaca gaagttcatt taactactcc
    16501 agatttatga tgcaccttaa atatttttct agtcgtgtgt tatgtaatga aaaaataaaa
    16561 cagaaaaata ttggtgatat ctatgagcag tttcttgaaa aagattttca gttacaacgt
    16621 gccattcatg aaattgaaag atatctgtac gcaactttta aatatgattt gattctggaa
    16681 gagaaactat atctttctat tcgcatcaaa gtattaatgg actaattata cataacattt
    16741 tcatgagata accagtatga aacaaaagaa atcctggagt ttttttcaga gcctggggaa
    16801 ggcatttatg tatcccatcg ctctgttaag tgtatgtggt atgatgttag ggctgggaag
    16861 tggtttagcc agcgatgata tggcaaaatt cattccagtg ttggctattc cgttaattaa
    16921 aaccatactt gattttattg ttagccttgg tttgtttgcc ttcgttaatt tacctgtatt
    16981 gtttgcgata gctatacctt tgggattatt aaaagagaaa gatgataaag cctatggcgc
    17041 tttttctggc ttaattggct ttatggcgat gcatcttgga acgaactttt atcttaaaca
    17101 gcacgactta ttggtagctg ctgaccaaat gtcgacacat gggcaaacca tcatactcgg
    17161 gatccagtcc tacaatacca gcgtgttggg tgggattgtg gcagggttat tagtcgccag
    17221 catgtataaa aagatcgtta acttacgtat tcctgaataa ttagggtttt atagtggccc
    17281 acgccttgtg cctatcatta cactgattgt gatgagtgga tttggtctga tcattccttt
    17341 tatctggccg ccatttttca atcttttcat gctcattggt cactggattt caacttccgg
    17401 tcctgttggt tatttcttct atgctgttgc cgaacgcgtg acgatacctt ttggcttaaa
    17461 tcacttggtg acatcagttt tccgctttac cccaatcggc ggatcggcag tgattggcgg
    17521 tgaagagtat tacggcaccc tgaacatgtt tatggcatac gtcaaagaga atgcggtcat
    17581 tccgctggat ttggcgggga aaatggagca gggcaaactg atgattcagt atggtctggc
    17641 tggagccgcg ctggcgatgt atcgcactgc tcatgctcaa aacagaaggg ctatcaaagc
    17701 attgctgatt tccggtgtgc tcacggtaat tattggcggc gtcagcgagc cgattgaatt
    17761 tctgttctta tttgtcagcc cgctgttgtt tgtcttccat gcctttatga atggattggc
    17821 taacatggtt ctgccatata tgggcgtgaa gatgggcttt actggcgatc tgattcaatt
    17881 tattagcttt ggtgtcttac gtggcacaag aacgggatgg ccattagcgg tatgtgttga
    17941 agtggcttat ttcttcattt attactttgt gttccgttgg accattctca aatttaacct
    18001 gatgactgta ggccgtgaag agtccagtcc tgtcacgctg aacgctcacg aagaaactgc
    18061 aatagctaac atcccagttc atgataaatc agagttgcag gcagcggagc aaatggttaa
    18121 ggctctgggt ggtaaagaaa atattaaatc actggataat tgtgtaactc gtttgcgttt
    18181 aactatcgcg gatatgggat tgataaatga ggctgcaata aaaagggccg gaggaattgc
    18241 ggttgtgaaa cttgatcaaa ataccttaca agtcattatc ggtacaaaag tcatcgccct
    18301 acgtcgggat atggataatt acatggggat atgttgatgg atatttttaa tacctcaatt
    18361 tctcgtaaag gaacatattg cacacaatgg gacttttgtg aagacagatt tggtgtaaaa
    18421 gatgtattac cattctctat ttcagatatg gatcttccga tacaggaagc tatcatcaga
    18481 acattaaaaa aacgtctgga acacccgatt ttagggtaca gtcgttggca gcatgatgac
    18541 tatctgaatt cgatagtcaa ttggtatcat caacaatata aaacagagat tcaaccagaa
    18601 tggatcacct atagcccaag cgtgatgtat tcaatatcta aggcaataga aatattgaca
    18661 ttgaatggag ataatattct cattttcacg cctgtttata acgcattttt tgatgtgatt
    18721 aagcataatg gtcgaaacat gctaacaacc tctttgatga aagaaaatgg gagaggctac
    18781 gttatcaact ggcaagactt tgagcttaaa attaaaagcg cgaagatggt gttattatgt
    18841 aatcctcata acccgacagg aacggtctgg tcggaagacg atcttcacag aatcgcagca
    18901 tgctgtgcaa ggcataatat ttggttatgt tcagatgaaa tacatagtga ttttgttttt
    18961 aatcatagtt tcacgtcagc gctaacaata aaagatgaca aagtggtggt gtttaattcg
    19021 atttcgaaaa catttaatgt tcctgcgcta accggatcat atatgatttc aactgacgat
    19081 aattttaatc ataagttcag aacgatatcg aggtatcgcg atttcgtaaa ctccccatca
    19141 gtactgaatg taattgcgac cattgttgcc tataatgaat gtgaagaatg gttaaagtca
    19201 ttaaaggtac atattgcctc taacattcaa tttaccttgc agtatttaaa tgaaaatatt
    19261 ccggaattga tcgtatggcc agctgagggc tgctattttt cgtgggttga ttgctcggcc
    19321 cttggttatc cctttgataa attttaccgt cgattaatta acgaagggag agtaggtatt
    19381 atggcggggc atgtttatgg tactgaagga gagggctatc tgcgtcttaa tctggcctgc
    19441 agtcgagaaa aattatatat ggggcttgcg cgccttgcga gtgtaattaa aaatattaat
    19501 caggaaaaag aaaatgaaca atacggatct tatccatctt attaaacgtt ttatgcgtaa
    19561 cgaacataaa gcagtagaag aggttattga ttcccccctt tcggaagtcg cgaatttaat
    19621 taaaatatta caatcttgcc agggaaaagt tgtttttatt ggtgttggga aatctggcat
    19681 tattgccaga aaacttgctg caacatttgc cagcaccgga actccctcgt tttttgttca
    19741 cggtacggaa gcggtacacg gcgaccttgg gatggtggcg aaagacgatg ttgttattct
    19801 tatttcaaac agtggtgaga cggcggaaat cctggcgaca ctgcctagtt tgaaaaaaat
    19861 gggtaattat ttgatctctt ttatccgcag tcatcactca tcgcttgcga taagttgtga
    19921 tttatctgtt gaaatccccg tcaaaagtga ggcggataat ttag
//
LOCUS       DADMIB010000070        19875 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.070, whole genome shotgun sequence.
ACCESSION   DADMIB010000070 DADMIB010000000
VERSION     DADMIB010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19875
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.070"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            54..830
                     /locus_tag="JNZ89_002306"
     CDS             54..830
                     /locus_tag="JNZ89_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000200160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
                     /protein_id="HAY8936170.1"
                     /translation="MTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTG
                     RAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDM
                     GRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEELLPPLMAGLKQAGLKVG
                     TPFFVRYGRVKIEDQICEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEAD
                     RTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR"
     gene            840..1499
                     /gene="eutL"
                     /locus_tag="JNZ89_002307"
     CDS             840..1499
                     /gene="eutL"
                     /locus_tag="JNZ89_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HAY8936171.1"
                     /translation="MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADS
                     DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
                     MVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY
                     GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR
                     A"
     gene            1512..2012
                     /gene="eutK"
                     /locus_tag="JNZ89_002308"
     CDS             1512..2012
                     /gene="eutK"
                     /locus_tag="JNZ89_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutK"
                     /protein_id="HAY8936172.1"
                     /translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL
                     VVEGDLAAGRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPD
                     APVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR
                     YRLKPH"
     gene            2058..3110
                     /gene="eutR"
                     /locus_tag="JNZ89_002309"
     CDS             2058..3110
                     /gene="eutR"
                     /locus_tag="JNZ89_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator EutR"
                     /protein_id="HAY8936173.1"
                     /translation="MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHA
                     LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA
                     TRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD
                     RVLHMLRSQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG
                     AMLEDAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA
                     FHAILGIGPNAWLKRIRLNAVRRELISPWSQSTTVKDAAMQWGFWHLGQFVTDYQQLF
                     AEKPSLTLHQRMREWG"
     gene            complement(3116..4015)
                     /gene="hemF"
                     /locus_tag="JNZ89_002310"
     CDS             complement(3116..4015)
                     /gene="hemF"
                     /locus_tag="JNZ89_002310"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HAY8936174.1"
                     /translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGG
                     RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV
                     PTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVY
                     PRYKKWCNDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVE
                     RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
                     DYQPKDGSPEAALSEFIKVRDWV"
     gene            complement(4019..4888)
                     /gene="amiA"
                     /locus_tag="JNZ89_002311"
     CDS             complement(4019..4888)
                     /gene="amiA"
                     /locus_tag="JNZ89_002311"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiA"
                     /protein_id="HAY8936175.1"
                     /translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNG
                     HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA
                     RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
                     KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL
                     HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF
                     HWFDNQKAHSKKR"
     gene            5102..5527
                     /locus_tag="JNZ89_002312"
     CDS             5102..5527
                     /locus_tag="JNZ89_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase YpeA"
                     /protein_id="HAY8936176.1"
                     /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL
                     FLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
                     IQINVPEDNDMVLGMYERLGYEHADMLSLGKRLIEDEEY"
     gene            5514..5963
                     /locus_tag="JNZ89_002313"
     CDS             5514..5963
                     /locus_tag="JNZ89_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2919 domain-containing protein"
                     /protein_id="HAY8936177.1"
                     /translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASR
                     EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRASFPRTWHVLYFLLLLAQVVL
                     LCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE"
     gene            6170..6745
                     /locus_tag="JNZ89_002314"
     CDS             6170..6745
                     /locus_tag="JNZ89_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoE-regulated lipoprotein"
                     /protein_id="HAY8936178.1"
                     /translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ
                     GVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQG
                     TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
                     QFRGEWRGPEGLMPSDDTLKNWKVSKIIWRR"
     gene            6841..7740
                     /gene="yfeX"
                     /locus_tag="JNZ89_002315"
     CDS             6841..7740
                     /gene="yfeX"
                     /locus_tag="JNZ89_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311329.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphyrinogen peroxidase"
                     /protein_id="HAY8936179.1"
                     /translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF
                     EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR
                     HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
                     KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTR
                     VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
                     LRFTKPVTGGYYFAPSLDKLMAL"
     gene            complement(7798..9102)
                     /gene="pbp4b"
                     /locus_tag="JNZ89_002316"
                     /pseudo
     CDS             complement(7798..9102)
                     /gene="pbp4b"
                     /locus_tag="JNZ89_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311328.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin binding protein PBP4B"
     gene            complement(9107..10531)
                     /gene="murP"
                     /locus_tag="JNZ89_002317"
     CDS             complement(9107..10531)
                     /gene="murP"
                     /locus_tag="JNZ89_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylmuramic acid transporter subunit
                     IIBC"
                     /protein_id="HAY8936180.1"
                     /translation="MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVD
                     PNIKTLEGVKSVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQL
                     KAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALN
                     FMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDF
                     FGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIM
                     PLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNS
                     LFPILSMAGAGQVGAALALYWRSQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMK
                     PFVTACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAG
                     GILVAWVCGFIFTTLFGCRNVNLD"
     gene            complement(10535..11431)
                     /gene="murQ"
                     /locus_tag="JNZ89_002318"
     CDS             complement(10535..11431)
                     /gene="murQ"
                     /locus_tag="JNZ89_002318"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HAY8936181.1"
                     /translation="MQLEKMITEGSNAASAEIDRVSTLEMCRIINDEDKTVPLAVERV
                     LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG
                     EYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR
                     TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK
                     VFGNLMVDVVATNEKLHVRQVNIVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLD
                     AAEAKKRLDQHGGFIRQVLDKE"
     gene            11595..12452
                     /gene="murR"
                     /locus_tag="JNZ89_002319"
     CDS             11595..12452
                     /gene="murR"
                     /locus_tag="JNZ89_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MurR"
                     /protein_id="HAY8936182.1"
                     /translation="MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQL
                     GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNTTALHLHSSITSDDSLEVIA
                     RKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI
                     GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCVEAARKQGATVIAITSL
                     ADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVASLKMIQR
                     SSELTQRLK"
     gene            12581..13372
                     /gene="ucpA"
                     /locus_tag="JNZ89_002320"
     CDS             12581..13372
                     /gene="ucpA"
                     /locus_tag="JNZ89_002320"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HAY8936183.1"
                     /translation="MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEK
                     LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS
                     DDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
                     AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPM
                     RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI"
     gene            13676..14692
                     /locus_tag="JNZ89_002321"
     CDS             13676..14692
                     /locus_tag="JNZ89_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8936184.1"
                     /translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN
                     PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKTDVVTYNQVTDVQILHDKGKL
                     IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY
                     TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
                     SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQA
                     QTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA
                     AGRN"
     gene            14692..15525
                     /gene="cysT"
                     /locus_tag="JNZ89_002322"
     CDS             14692..15525
                     /gene="cysT"
                     /locus_tag="JNZ89_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysT"
                     /protein_id="HAY8936185.1"
                     /translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSW
                     AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
                     PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
                     PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI
                     AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
                     H"
     gene            15525..16400
                     /gene="cysW"
                     /locus_tag="JNZ89_002323"
     CDS             15525..16400
                     /gene="cysW"
                     /locus_tag="JNZ89_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HAY8936186.1"
                     /translation="MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQ
                     AFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLL
                     LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
                     VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
                     GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
                     ENQEKRAQQEEHHEH"
     gene            16390..17487
                     /gene="cysA"
                     /locus_tag="JNZ89_002324"
     CDS             16390..17487
                     /gene="cysA"
                     /locus_tag="JNZ89_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter ATP-binding
                     protein CysA"
                     /protein_id="HAY8936187.1"
                     /translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
                     LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVL
                     PRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
                     DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA
                     DAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR
                     PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGE
                     RLFVGLQHARLYNGDERIETRDEELALAQSA"
     gene            17621..18532
                     /gene="cysM"
                     /locus_tag="JNZ89_002325"
     CDS             17621..18532
                     /gene="cysM"
                     /locus_tag="JNZ89_002325"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HAY8936188.1"
                     /translation="MSTLEQTIGNTPLVKLQRMGPNNGSEVWLKLEGNNPAGSVKDRA
                     ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
                     MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ
                     QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLP
                     GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVV
                     AIICDRGDRYLSTGVFGEEHFSQGAGI"
     gene            complement(18535..18903)
                     /locus_tag="JNZ89_002326"
     CDS             complement(18535..18903)
                     /locus_tag="JNZ89_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HAY8936189.1"
                     /translation="MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIF
                     VRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDE
                     NAQPFLHALIAQTDKTVPAQ"
     gene            19008..19859
                     /gene="pdxK"
                     /locus_tag="JNZ89_002327"
                     /gene_synonym="thiJ"
     CDS             19008..19859
                     /gene="pdxK"
                     /locus_tag="JNZ89_002327"
                     /gene_synonym="thiJ"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HAY8936190.1"
                     /translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL
                     NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQ
                     IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI
                     FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNV
                     ISHSRVKTDLKGTGDLFCAQLISGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELI
                     LPPLAEA"
BASE COUNT         4571 a         5044 c         5610 g         4650 t
ORIGIN      
        1 cggcccccgc gctgtcagaa gcaaagtgca ccaccaccac ctgtgcggca ccggtgacct
       61 cggaaagctg cgcgctggat ttaggttctg cggaagcaaa agcgtggatt ggtgttgaaa
      121 acccgcatcg cgcagacgta ttaacagaac tgcgtcgcag caccgtggcc cgcgtttgta
      181 ccggtcgtgc cggtccgcgt ccgcgtaccc aggcgttgct gcgtttcctg gccgatcact
      241 ctcgttcgaa agataccgta ctgaaagaag tgccggaaga gtgggtgaaa gcgcagggct
      301 tgctggaagt acgctccgaa attagcgaca aaaatctcta cctgactcgc ccggatatgg
      361 gccgccgcct gtgtgcagaa gctgttgaag cgctgaaagc acagtgtgtt gctaatccgg
      421 acgtacaggt cgttatttct gatggcctgt caactgatgc catcaccgtg aactacgaag
      481 agctcctgcc gccgctgatg gcgggcctga aacaggccgg gctgaaagtc ggcacgccat
      541 tctttgttcg ttatggtcgc gtgaagattg aagatcagat ctgtgagatc ctcggcgcga
      601 aagtggtgat cctgctggtg ggggaacgtc cggggttggg tcagtcagaa agcctctcct
      661 gttacgccgt ttactcgccg cgtatggcga ccaccgttga ggccgatcgc acctgcatct
      721 ctaacattca ccagggcggc acgccgccgg ttgaagccgc agccgtcatt gtggatttgg
      781 cgaaacgtat gctggagcag aaagcatccg gcatcaacat gacccgataa ggaggcatca
      841 tgccagcttt agatttgatt cgaccgtcgg taaccgccat gcgggtgatt gcctccgtta
      901 acgctgaatt tgcgcgtgaa ctaaaattgc cgccgcatat tcgtagcctc gggctgattt
      961 ctgctgattc cgatgacgtc acctacattg cggctgacga agcgaccaag caggcgatgg
     1021 tcgaagtggt atatggccgc tcgctgtatg cgggagcagc acacggaccg tcaccgactg
     1081 ccggtgaagt gctgattatg cttggtgggc caaacccggc ggaagtgcgt gctggtctgg
     1141 atgcgatggt tgcgcatatt gaaaatggcg ctgctttcca gtgggctaat gacgcagaaa
     1201 acaccgcatt cctggcacat gtagtttcgc gtaccggttc ttatctctca tcaaccgccg
     1261 ggatcacgct tggcgatccg atggcgtatc tggtggcacc gccgctggaa gcgacctacg
     1321 gcattgatgc agcgttgaaa tctgccgacg tacagctggt gacctatgtc ccgccaccgt
     1381 ctgaaaccaa ctactcggca gcatttttaa ccggtagcca ggccgcgtgt aaagcagcct
     1441 gtaacgcctt taccgatgca gtgctggaaa tcgcgcgtaa tccaatccag cgtgcgtaac
     1501 ggaggttgcc gatgatcaat gcactgggat tgctggaagt ggacggcatg gtcgccgcga
     1561 tagatgcagc ggatgccatg ctcaaagcag ctaacgttcg tctgctcagt cacgaagtgc
     1621 ttgaccctgg tcgcttaacg ctggtggtgg aaggcgatct ggcggcgggt cgtgcggcgc
     1681 tggacgcagg ttgtgctgcc gcgatgcgta ccgggcgtgt catcagccgc aaggagatcg
     1741 gtcggccaga cgatgacacc cagtggctgg ttactggctt taaccgccag ccgaagcaac
     1801 ccgtaaggga acccgacgcg ccagttatcg tcgcggaatc tgctgacgag ttgttggcgc
     1861 tgttaacatc agtacgtcag ggaatgacgg caggagaagt ggctgcccac tttggctggc
     1921 cgctggaaaa agccagaaat gcgctcgaac agctcttttc tgccgggacg ttacgtaaac
     1981 gcagtagtcg ttatcgtctc aagccccatt aacctgtcgg aggtgctggg tgtcctacaa
     2041 cacccggcat taacatcatg aaaaagaccc gtacagccaa tttgcaccat ctttatcatg
     2101 aacccttacc cgaaaacctg aagctcacgc cgaaggtcga agtggataat gttcatcaac
     2161 gacagacaac ggatgtctat gaacatgctt taacgattac cgcctggcag cagatttacg
     2221 atcagctgca tccgggcaag tttcatggtg aatttacgga aattctactc gatgatattc
     2281 aggtttttcg tgaatacacc ggtctggcgc tgcgtcagtc gtgcctggtc tggccgaact
     2341 cgttctggtt tggcattccg gcgacgcgcg gtgagcaggg atttatcggt tcgcaatgtc
     2401 tgggaagcgc ggaaatcgcc acccgccctg gtggcactga atttgaactg agcacgccgg
     2461 atgattacac gatcctgggc gtggtgcttt ctgaagatgt catcacccgg caggctaact
     2521 ttttgcataa cccggatcgg gtattacata tgctgcgtag ccagtcggcg ctggaagtga
     2581 aagagcagca taaagccgcg ctgtggggct ttgtccaaca ggcgctggcg acgttttgcg
     2641 agaacccgga aaatctccat cagcctgcag tgcgaaaagt gctgggggat aatttgctaa
     2701 tggcgatggg ggcgatgctg gaagacgcgc aaccaatggt gacggcggaa agcatcagtc
     2761 atcagagtta ccgtagatta ctttcccgcg cccgtgaata tgtgctggaa aatatgtctg
     2821 agccggtgac ggtgctggac ttgtgtaatc aactgcatgt cagtcgccgc acgctacaaa
     2881 acgcgtttca cgctatttta ggcattggcc caaacgcgtg gctgaaacgc attcgcctga
     2941 acgccgtacg ccgcgaactg ataagcccgt ggtcgcaaag cacaacggta aaagacgccg
     3001 ccatgcagtg gggattctgg catctggggc aatttgtcac ggattaccag cagctgtttg
     3061 ccgagaagcc gtcgttgacg ttgcatcagc ggatgcggga atgggggtga gggagttaca
     3121 cccaatccct gaccttaata aactcactta acgccgcttc tgggctgcca tcttttggct
     3181 gataatcata ctcccagcgt accagtggcg gcattgacat caggatcgac tcggtgcgcc
     3241 cgccagtttg caggccaaac agagtgccgc gatcccagac cagattgaac tcgacataac
     3301 gaccgcgacg gtagagctga aaattgcgct cgcgctcgcc gtaggccatt gctttacgtc
     3361 gctctacaat tggtaaataa gcgtcggtgt agcctttgcc taccgcctgc ataaaggcaa
     3421 aacagtggtc gaaatctggc gtgttcagat catcaaagaa cagcccgcca ataccgcgct
     3481 gttcgttgcg atgtttgagg tagaagtaat cgttgcacca ctttttgtaa cggggataaa
     3541 cgtcttcacc aaatggcagg cacaggtcac gggcggtgcg gtgccagtga atggcgtctt
     3601 cttcaaaacc atagaaaggg gttaaatcga agccgccgcc aaaccaccag acgggctctg
     3661 cacccggttt ttcggcaata aaaaaacgca cattcgcgtg gctggtggga acatacgggt
     3721 tatgcggatg cactaccagt gaaacgccca tcgcctcgaa actgcgcccg gcaagttccg
     3781 ggcgatgagc ggtggcggaa gcaggcatcg cctcgccgtg gacgtgagaa aagttgacgc
     3841 ctgcctgttc gaaaacacca ccattacgca acacccgact acgcccgccg ccgccagctt
     3901 cgcgctgcca actatcttcg acaaattctg cgccatcgac ggcggtcagc tgctgacaaa
     3961 tcgtatcctg aaggttgagc agaaactgtt taacctggtg tgcgtcgggt ttcataactt
     4021 atcgcttttt cgaatgtgct ttctggttgt cgaaccagtg gaaataactg atcacgcctt
     4081 cagcaatcgc tgtggcgatt ttctgacgaa acgccgccgt gcctaacagc cgctcttctt
     4141 ccgggttggt gataaacgag gtttccacca gcaccgaagg aaccgacggc gatttcaaca
     4201 ccacaaacgc ggcttgttcg gtgttgcggc tgtgcagttt atgcaccggc ttaatctttt
     4261 tcagaatatg cgagccaagc gtcaggctgt ttttaatagt atcggtttgc accagatcaa
     4321 acagcacttg ctgcaatagg tgatccttgt cagtcgcctt tttaccggca acttcatcgg
     4381 cgcggttttc gcgttcagac aggtatttcg ccattgcgct acttgcccca cggttagaga
     4441 gggcaaatac cgaagcaccg gcagctttcg ggttggtaaa gccatcggca tgaattgaca
     4501 taaacagatc tgcgccatgt ttatgggcga tttcaacgcg atcgtaaagt gggataaacg
     4561 tatcgccaga acgcgttaaa cgcgcatcaa tcccatgatt acgcaaaatg gaacggacgt
     4621 ttttagcaat cgccagcacc acatgttttt ctttcgaacc gttgcgtccg atcgctccgg
     4681 tatcaattcc gccgtggcct ggatcgagaa caacgacacg tttgccgcca gattttttgg
     4741 ctttcggctt gctgtgtccg ttgctggttt ttaaaggttc gtctttggcg atggcttgcg
     4801 acattcctga caacgtcagg gcagccaaac cggctttcag cacctggcgg cgcgaagtga
     4861 gtgtttttag tggtttaaaa gtgctcatac ggcctgagtt gtaataataa agttccagat
     4921 gttatatcgt atcgcgtaat ccgttacgac ggtttgatgt tgagaattgt tttacttttc
     4981 atttcaatag ttgacaactc cccattatgc cactttttca accgattttc gtcagatatt
     5041 ggctaattct accgttcacg ccataatcag ccttttaacc cgcaaaaagg taacgaatac
     5101 catggagata cgcgtatttc gccaggaaga tttcgaagag gtcatcaccc tttgggagcg
     5161 ttgcgacttg ctgcgtccgt ggaacgatcc ggaaatggac atcgagcgta agatgaacca
     5221 tgacgtcagt ttgtttttgg tcgctgaggt gaacggtgaa gtggtcggaa cggtgatggg
     5281 cggttatgac gggcatcgcg ggtctgctta ttatcttggc gtgcatccag agtttcgtgg
     5341 gcgtgggatt gccaatgcgt tgcttaatcg gctggagaaa aagctgattg ctcgtggctg
     5401 cccgaaaatt cagatcaatg tgccggaaga taacgacatg gtgctcggaa tgtatgaacg
     5461 cctgggatat gaacacgccg acatgctgag tctgggtaag cgtttgattg aagatgaaga
     5521 gtactgagtt ccatcctgtc cattatgatg cgcacggacg cctgcgttta cccttgctct
     5581 tctggcttgt gctattgctt caggcgcgaa cctgggtgct gtttatcatt gccggtgcgt
     5641 cgcgcgagca gggtactgcg ctgctaaatc tgttttatcc cgatcacgat aatttctggc
     5701 tggggttgat tcccggtatt ccggcggtgc tggcgttttt gttgagcggt cggcgggctt
     5761 cgtttcctcg cacctggcat gtgctctatt ttctgttgct gttggcgcag gtggttttac
     5821 tttgctggca accgtggctg tggctgaacg gtgaatccgt tagcggtatc ggtctggcgc
     5881 tggtagtggc ggatattgtg gcgttaatct ggctgctgac caatcgacgt ttacgcgctt
     5941 gttttaatga agaaaaagaa taacgcagag gtgcgctttg tttatgccgg atgcggcgtg
     6001 aacgccttat ccggcctaca aaacatcgaa aattcaatat attgcaggag aaagtaggcc
     6061 tgataagcgt agcgcatcag gcaattttgt gtttgtcatc aacctttaac ggcacttttt
     6121 ggtgaatttg cactccaagc aacgttattg aataaccaaa ggaagtgaca tgaaatcgct
     6181 gcgtttaatg ttatgcgcta tgccgttgat gctgaccggc tgttccacga tgtcgtcagt
     6241 taactggtcg gctgctaacc cgtggaactg gtttggatcg tccaccaaag tgagcgagca
     6301 gggcgtgggt gaattaacgg cgtccacacc actgcaagaa caagccattg ctgatgcgct
     6361 tgatggcgat tatcgcctgc gcagcggaat gaaaaccgcg aacggcaacg tggtgcgctt
     6421 ttttgaagtg atgaaaggcg acaacgtggc gatggtgatt aacggcgatc aaggcacgat
     6481 cagtcgcatt gacgtgctgg atagcgatat tcctgctgac accggtgtta aaatcggtac
     6541 accgtttagc gacctttaca gcaaagcatt tggcaattgc caaaaagctg atggtgatga
     6601 taatcgtgcc gtcgaatgta aagccgaagg cagtcaacat attagctacc agttcagagg
     6661 ggaatggcgt ggtcctgaag ggttaatgcc ttcggacgat accctgaaaa actggaaagt
     6721 cagtaaaatt atctggcggc gttaatttgc gtctgaacaa accgccgccg cgaaaaaaca
     6781 cgtaaaatag cgctcaacaa tgccacggat tgcgtggcat tcttattttc aggaggaaca
     6841 atgtctcagg ttcagagtgg cattttgcca gaacattgcc gcgcggcgat ttggatcgaa
     6901 gccaacgtga aaggggaagt tgacgccctg cgtgcggcca gtaaaacatt tgccgacaaa
     6961 ctggcaactt ttgaagcgaa attcccggac gcgcatcttg gtgcggtggt tgcctttggt
     7021 aacaacacct ggcgcgctct gagcggcggc gttggggcag aagagctgaa agattttccg
     7081 ggctacggta aaggccttgc gccgacgacc cagttcgatg tgttgatcca cattctttct
     7141 ctgcgtcacg acgtaaactt ctctgtcgct caggcggcga tggaagcctt tggtgactgc
     7201 attgaagtga aagaagagat ccacggcttc cgttgggtgg aagagcgtga cctgagcggc
     7261 tttgttgacg gtacagaaaa cccggcgggt gaagagacgc gccgcgaagt ggcggttatc
     7321 aaagacggcg tggatgccgg cggcagctat gtgtttgtgc agcgttggga gcacaacctg
     7381 aagcagctca accggatgag cgttcacgat caggagatga tgatcgggcg caccaaagag
     7441 gccaacgaag agattgacgg cgacgaacgt ccggaaacct ctcacctcac ccgcgttgat
     7501 ctgaaagaag atggcaaagg gctgaagatt gttcgccaga gcctgccgta cggcaccgcc
     7561 agtggcactc acggtctgta cttctgcgcc tactgcgcgc gtctgcataa cattgagcag
     7621 caactgctga gcatgtttgg cgataccgat ggtaagcgtg atgcgatgtt gcgcttcacc
     7681 aaaccggtaa ccggcggcta ttacttcgcg ccgtcgctgg acaagctgat ggcgctgtaa
     7741 gcgtttctga ttctatgatt aaaggccagc cagtaacaaa actgactggc ctttttatta
     7801 cttttgcttc aacgccgcat acacctgatc aactacccaa ccataagttg caatcggtaa
     7861 ctgaccgctt tcgaacatat tgggattttt ttgtggatcg gcaactggcg aatggggctt
     7921 gttgcttaac atcacaatcg ccatatgatt gaccggatcg ataacggtta ctgtcccggt
     7981 ccagccagtg tgaccgtagg tttgcgggct tgccagcgtg ccaaacgtcg gcgtcatggt
     8041 ggcattacca ttcacgcgcc agccgaggcc aaaagtggca tcttccttag agctggtggt
     8101 gaacatcttc accgtttccg cactgaacag ctgcacatcg ccatagcccc cgccgttcag
     8161 catcgtttgc attaacaccg caatatcgcc ggtattggaa aacaaacctg cgtgcccgga
     8221 aacgccgccc atcgaataga aggctttttc atcgtgcacc tgaccccaga gagtggaggt
     8281 gcggatattc gggaaatgga tcacgccatc gcgggtattg ccgttcaatt ccgtggcggc
     8341 aatttgttgc ggtttaaagc ctttcagcag cgggttaaat accgtatgtg tcaggccgag
     8401 cgggcgataa atcgactctt caacatagcg gtcaagcggc tgaccggtaa ccgactcgac
     8461 gataaatcca agcagcatat aatcgacatc gctgtagata tgtttgctgc cgggctgata
     8521 ttccagcggc gtgcgcttga tcatctccag cgtctggcct ttatcctagg aatataacgc
     8581 gcccgcgacc gctttattcg ggtattgcgg atctgccggg aaaccgccgc tgtgatgcag
     8641 caggtcagaa atccgcaggg tgtttttgcc tttaatggtg tcatttggac tatcggcaaa
     8701 ccccggaata tatttcgcaa tccgatcgtc aggatgcagt ttgccttcgc tcatcagctt
     8761 ttgcagggcg aagttcgtgg cgtacatttt ggtgtttgag gccaggtcat acagcgtccc
     8821 ggtggtggct ttgacaggct gttccatcaa cacgctgcca tcgtactttt tcgccgctcc
     8881 ccaggctttg cgatacacaa tctgattatc tttaatgatc agcaggttta cgccgggata
     8941 accggcatca acttgctggc taatccagcg atccatctgg ttaagccgtt tgacgttaaa
     9001 ccctgctttc tctggcgagc tttctgtcag aacagggtat tttgcggcgc tgacgctaca
     9061 actaacagcc agcagagaaa gatagagcat tgtccgtttc atgatatcag tccagattga
     9121 cgttacggca gccaaagagc gtggtgaaaa taaacccgca aacccatgcc accagaatcc
     9181 cgccagcata aaccgccatg gccggaagga tgccttgtgc ggaagtcatc agcggcagcg
     9241 ctaccagacc agacggccca aaggcgctgt ttaagcccat cggcagaccc caccaggcta
     9301 tcaggccgat aaacaaaccg cccgccgcac cgcctaaaca ggcggtgaca aacggcttca
     9361 tgcggggcag ggtgacaccg taaatcagcg gttcaccaac gcccagcagg ccgggaataa
     9421 tcgccccgcg tacctgactg cgtagcgcac tgtgcggttg cgaccgccag tagagtgcca
     9481 gcgccgcgcc cacctggccc gcgcctgcca ttgaaaggat gggaaataag ctgttgaatc
     9541 cctggctgtc cattaacgcg aggtaaacag gaataaagcc ctgatgcacg ccaaatacca
     9601 cggcgatcag gaacagcccg gctaaaaccg cacaaccgaa cggattactg ttcaggtgca
     9661 taaacagcca tgacatacct tcgaataacc agccacccag cggcataatg atcaggtacg
     9721 caagcgtagc ggtgatcagc agggtgatta acgaggtcag cagcatgtcg agatcgtccg
     9781 gcataaagcg gcgcaccatg ccttcaatgc gggcgcaggc ccacgcggca atcagcacgc
     9841 cgataatatt gccgcgcgga tcgatgggca gaccaaagaa atcgtgaaaa ccggcgtagt
     9901 aaccggtggt tgcagcgggg ttataaccga gcaaaaagag tgcggcaata attgcgccat
     9961 tgacgcccgt gccgccaaat gcctgggcgg cgttatagcc caccagaatc accaggaagg
    10021 tgaacaaacc tttgctgaac accttcataa aattcagcgc gtcgggtagc gtgccctgag
    10081 catctgccgg aacgtgcatc accgtggcaa ttaacgtcgc tatccccagc agcagaccgg
    10141 cggcaataaa accggggatc agcggcgtga agatggtggc gaatttggcg agaaattgtt
    10201 gcacgccgga ggtttgtttg gcttttaact gacgtttgtt ctgggcggcg atttctgcgg
    10261 catcctgtac cggtgcctcg cccagcagct cgctcatcgc ttttgcggca cgatgcgctt
    10321 taccaggtcc aaaaacgacc tgcacctggt cgctggtcaa aatgacgctc ttcacgcctt
    10381 ccagcgtttt gatattggga tcaaccagtg aactgtcatg tacacccaga cgcaggcgcg
    10441 tcatacagtt accacaactg gcgatatttc ccggtccgcc gacacgggta agaatggtgt
    10501 tcagaagttc actgctgatc tctttggcca tgggttattc cttgtctaaa acctgacgaa
    10561 taaagccgcc gtgttgatcc aggcgttttt tagcttctgc ggcatcgaga tttttcagca
    10621 ccatcacaat ggccgtttta cagttgcgct cgcaggcaat taacgccgct tccgcttgtt
    10681 cggcattaca tccggtggcg tttttaacga tattgacctg gcgcacatgc agtttttcgt
    10741 tggtggcgac cacatcgacc ataaggttgc cgaacacttt gccggattta atcatcagcc
    10801 cggtggaaag catattgagc accagtttct gcgctgtacc tgctttcatc cgcgaagaac
    10861 cggtaacaac ttcggcacct acaatcggtg taatggcaaa ctcagcggtg gttgaaacgg
    10921 cgctccccgg attacaggaa attcccactg tgcggcagcc gagctggcgt gcgtattcca
    10981 gtccggcaat cacatacggc gtgcgaccgc tggcagcaat gccaaccacc acatcctgtg
    11041 ccgttaaatt aatatttttc agatcattaa caccgccttc ccggctatct tccgcgcctt
    11101 ccaccgcgtg ctgaatggca tattcgccgc cagcaatcaa accaaccacc agacccggtt
    11161 tcacgccgta ggtgggcgga cattcgctgg catccagaat ccccagacga ccggatgttc
    11221 ccgcaccgag gtaaatcaga cgcccgccgc cgcttacctg ggcgtggata acatcgatcg
    11281 ccgcggcgat atccggcagt acgcgctcaa cggcaagcgg tacggtttta tcttcatcgt
    11341 tgataatccg gcacatttcc agcgttgata cgcggtcaat ttcagccgag gcggcgttcg
    11401 agccttcagt aatcatcttt tcaagttgca tcggtggtga ccttactatt tacgatcaaa
    11461 taattgcaga tgtatggaat catatatcct gaattgacag acttaaagga atcattgagt
    11521 ctacactcgc agagtgtgaa gagcgtcata agaacttaag cggaatttat gctgccagcc
    11581 caggagagtg gaagatgttg tacctgacga aaataagcaa tgcggggagt gaattcaccg
    11641 aaaacgagca aaaaatcgct gactttctgc aggccaacgt gagtgagctg caatccgttt
    11701 cttcacggca gatggcgaaa cagctcggca ttagccagtc gagcatagtg aaatttgccc
    11761 aaaaactcgg cgcgcaagga tttactgaat tgcgtatggc gttaataggc gaatacagtg
    11821 ccagccggga gaaaacgaat accacggcgc tgcacctgca cagttcgatt accagtgatg
    11881 attcgctgga agtgattgcc cgcaaattga atcgcgaaaa agagctggcg ctggagcaaa
    11941 cctgtgcgtt gttcgactac gcgcggctgc aaaaaatcat tgaggtcatc agtaaagcac
    12001 cgtttatcca gataacgggc ctgggcggat cggcgctggt ggggcgcgat ctgtcgttca
    12061 aactgatgaa aattggctat cgcgtggcct gcgaagccga cacgcacgta caagccaccg
    12121 tttcccaggc gttgaaaaaa ggcgatgtac aaatcgctat ctcttacagc ggtagtaaaa
    12181 aagagattgt cttgtgcgta gaagcggcac gaaagcaggg ggcaacggtg attgccatta
    12241 cttctctggc tgactctccg ctgcggcggc tggcgcattt cacgctcgat accgtttccg
    12301 gtgaaaccga atggcgtagc tcgtcgatgt ctacccgcac ggcgcaaaat tctgttaccg
    12361 atttactgtt tgttggtctt gtgcaactca atgatgtggc gtcattgaaa atgattcagc
    12421 gcagcagtga gctaacacaa cgcctgaaat gatgcataaa gcagcgactg gattgagatt
    12481 ttcctgaatt agtgagctga tccgcagcaa tattttgttt atcctgtatt ttcagaggga
    12541 atggagtgta acgctctgta ttaacaagga gagcattaaa atgggtaaac tcacgggcaa
    12601 gacagcactg attacgggcg cattgcaggg aattggcgaa ggaattgcca gaacttttgc
    12661 acgtcatggc gcgaacctaa tcttgctgga tatctcccct gagatcgaaa agctggcgga
    12721 cgaactgtgt ggtcgtggtc atcgctgtac ggcggttgtc gccgatgtgc gtgacccggc
    12781 gtcggtagcc gcagctatca aacgcgcgaa ggaaaaagaa gggcgcattg atatcctggt
    12841 gaataacgca ggcgtttgtc gtctgggcag tttcctcgat atgagcgatg acgatcgcga
    12901 tttccatatt gatatcaata ttaaaggcgt atggaacgtc acgaaggcgg tgctgccgga
    12961 gatgattgcg cgcaaagatg gtcgcattgt gatgatgtct tcagtcactg gtgatatggt
    13021 ggccgatcct ggcgaaacgg cgtacgcctt aacgaaagcg gcgattgttg gcctgacaaa
    13081 atcgctggcg gtggagtacg cgcagtctgg tattcgcgtt aacgccattt gcccgggata
    13141 cgtgcgcaca ccaatggcgg aaagcattgc ccgccagtcg aacccggaag atccagagtc
    13201 ggtgctgact gaaatggcga aagcaatccc gatgcgtcgc ctcgccgatc cgctggaagt
    13261 cggcgaactg gcggccttcc tcgcatcgga tgaatccagc tatttaaccg gtacacagaa
    13321 tgtgattgat ggcggcagca cactgccgga gacggttagc gtcggtatct gattcacctc
    13381 tgtttcctcc ctgcatgtgt ggggaggatt tcgtcttgaa ctaagttcac caggctattt
    13441 tatttgtcat tttggccccg ggcagtgctc gaaatactca cgtactatgt gtacgctccg
    13501 gtttctccgc gctgtccgtg tccaaactgc ctgcaacaat tacgcctgtt gaaccaagtt
    13561 cttattccct ttttaacttc caaatcacca aacggtatat aaaaccgtta ctcctttcac
    13621 gtccgttata aatatgatgg ctattagaaa gtcattaaat ttataagggt gcgcaatggc
    13681 cgttaactta ctgaaaaaga actcactcgc gctggtcgct tctctgctgc tggcgggcca
    13741 tgtacaggca acggaactgc tgaacagttc ttatgacgtc tcccgcgagc tgtttgccgc
    13801 cctgaatccg ccgtttgaac agcaatgggc aaaagataac ggcggcgaca aactgacgat
    13861 aaaacaatct catgccgggt catcaaaaca ggcgctggca attttgcagg gcttaaaaac
    13921 cgacgttgtc acttataacc aggtgaccga cgtacaaatt ctgcacgaca aaggcaagct
    13981 gatcccggct gactggcagt cgcgcctgcc gaataatagc tcgccgttct actccaccat
    14041 gggcttcctg gtgcgtaagg gcaacccgaa gaatatccac gactggaacg acctggtgcg
    14101 ctccgacgtg aagctgattt tcccgaaccc gaaaacgtcg ggtaacgcgc gttataccta
    14161 tctggcggca tggggcgcag cggataaagc tgacggtggc gacaaagcca aaaccgaaca
    14221 gtttatgacc cagttcctga aaaacgttga agtgttcgat actggcggtc gtggcgcgac
    14281 caccactttt gccgagcgcg gcctgggcga tgtactgatc agcttcgagt cggaagtgaa
    14341 caacatccgt aaacagtatg aagcgcaagg ctttgaagtg gtgattccga aaaccaacat
    14401 tctggcggaa ttcccggtgg cgtgggtcga taaaaacgtg caggccaacg gtacggaaaa
    14461 agcagcaaaa gcctacctga actggctcta cagcccgcag gcgcagacca tcatcaccga
    14521 ctattactac cgcgtaaata acccggaagt catggacaaa ctgaaagata aattcccgca
    14581 gaccgagctg ttccgcgtgg aagacaaatt tggctcctgg ccggaagtga tgaaaaccca
    14641 cttcaccagc ggcggcgagt tagacaagct gttagcggcg gggcgtaact gatgtttgca
    14701 gtttcatcaa gacgcgtgct gccgggcttt accttaagcc tcggcaccag tctgctgttt
    14761 gtgtgcctga ttttgctgct gccgctctcc gcgctggtga tgcagctggc tcagatgagc
    14821 tgggcgcagt actgggaggt gatcaccaac ccacaagtgg tcgcggccta caaagtgacg
    14881 ctgctgtcgg cgtttgtggc atcgattttt aacggcgttt tcggtctgct gatggcgtgg
    14941 attttaacac gttatcgctt tccgggccgc acgctgcttg atgcgctgat ggatttaccc
    15001 tttgcgctgc caacggcagt cgccggttta acgctggcct cgctcttttc cgtaaacggt
    15061 ttttacggtg aatggctggc gaagtttgat atcaaagtca cctatacctg gcttggtatt
    15121 gcggtggcga tggcctttac cagcattccg tttgtggtgc gtaccgtgca gccggtgctg
    15181 gaagagttag gcccagaata tgaagaagcg gcggaaacgc ttggtgcaac gcgctggcag
    15241 agtttctgca aagtggtgct gccggaactt tctccagcgc tggtggcggg cgtggcgttg
    15301 tcgtttaccc gtagtcttgg tgagtttggc gcggtgatat ttatcgccgg gaacatcgct
    15361 tggaagacgg aagtgacgtc gctgatgatt tttgtgcgct tgcaggagtt tgattacccg
    15421 gcggcgagcg cgattgcttc ggtgatcctc gcggcatccc tgctgctgct gttctcaatt
    15481 aacactctgc aaagtcgctt tggtcggcgt gtggtaggtc attaatggcg gaagttaccc
    15541 aattgaagcg ttatgacgcg cgcccgatta actggggcaa atggtttctg attggcatcg
    15601 ggatgctggt atcggcgttc atcctgctgg tgccgatgat ttatatcttc gtacaggcgt
    15661 tcagcaaagg gctgatgccg gttttacaga atctggccga tccggacatg ctgcacgcca
    15721 tttggctgac ggtgatgatt gcgctgattg ccgtaccggt gaacctggtg ttcggcattc
    15781 tgctggcgtg gctggtaacg cgctttaact tccccggacg ccagttactg ctgacgctac
    15841 tggacattcc gtttgccgta tcgccggtgg ttgcaggtct ggtgtatctg ctgttctacg
    15901 gctctaacgg tccgctgggc ggctggctgg atgaacataa tttgcagatt atgttctcct
    15961 ggccgggaat ggtgctggtc accatctttg tgacctgtcc ttttgtggtg cgcgagctgg
    16021 tgccggtgat gttaagccag ggcagccagg aagacgaagc ggcgattttg cttggcgcgt
    16081 ctggctggca gatgttccgt cgcgtcacat tgccgaacat tcgctgggcg ctgctgtatg
    16141 gtgtggtgct aaccaacgcc cgcgcgattg gcgagtttgg tgcggtgtcg gtggtttccg
    16201 gctcgattcg cggcgaaaca ctttcgctgc cgttacagat tgaattgctg gagcaggact
    16261 acaacaccgt cggctccttt accgccgccg cgctgttgac gctgatggcg attatcaccc
    16321 tgtttttaaa gagtatgttg cagtggcgtc tggagaatca ggaaaaacgc gcgcagcagg
    16381 aggagcatca tgagcattga gattgccaat attaagaagt cgtttggtcg cacccaggtg
    16441 ctgaacgata tctcactgga tattccttct ggtcagatgg tcgcgctgct ggggccgtcc
    16501 ggttccggaa aaaccacgct gctgcgcatt attgccgggc tggagcatca aaccagcggg
    16561 catattcgct tccacggtac cgacgtgagc cgcctgcacg cacgcgatcg taaagtcggt
    16621 ttcgtgttcc agcattacgc gctgttccgt catatgacgg tgttcgacaa tatcgctttt
    16681 ggcctgacgg tgctgccacg tcgcgagcgc ccgaatgccg cagccatcaa agcgaaagtg
    16741 acaaaattgc tggagatggt ccagcttgcg catctggcgg atcgttatcc ggcacagctt
    16801 tccggcggcc agaaacagcg cgtggcgctg gcgcgcgcgc tggctgttga accgcaaatt
    16861 ctcctgcttg atgaaccgtt tggcgcgctg gatgcgcagg tgcgtaaaga gctgcgtcgc
    16921 tggctgcgtc aactgcatga agagctgaaa ttcaccagcg tgttcgtgac ccacgaccag
    16981 gaagaagcga ccgaagtagc tgatcgtgta gtggtgatga gccagggcaa tatcgagcag
    17041 gctgatgcgc cggaccaggt atggcgcgaa ccagcgaccc gatttgtgct cgaatttatg
    17101 ggcgaagtga accgcctgca gggaaccatt cgcggcgggc agttccatgt tggcgcacat
    17161 cgctggccgc tggggtatac gcctgcgtat caggggccgg tggatctctt cctgcgcccg
    17221 tgggaagtgg atatcagccg ccgtaccagt ctcgattcgc cgctgccggt acaggtactg
    17281 gaagccagcc cgaaaggtca ctacacccaa ttagtggtgc agccgctggg gtggtacaac
    17341 gaaccgctga cggtcgtgat gcatggcgac gatgccccgc agcgtggcga gcgtttattc
    17401 gttggtctgc aacatgcgcg gctgtataac ggcgacgagc gtatcgaaac ccgagatgag
    17461 gaacttgctc tcgcacaaag cgcctgatag gttgagtgaa tgttaaacgc ccggaggcgc
    17521 ttcccgcgat ccgggctttt taatggcaag gtttgtaacc tgtagacctg ataagacgcg
    17581 caagcgtcgc atcaggcaac accacgtatg gatagagatc gtgagtacat tagaacaaac
    17641 aataggcaat acgcctctgg taaagttgca gcgaatgggg ccgaataacg gcagtgaagt
    17701 ctggttgaaa ctggaaggca ataacccggc aggttcggtg aaagatcgtg cggcactttc
    17761 gatgatcgtc gaggcggaaa agcgcgggga aattaaaccg ggtgatgtgt taatcgaagc
    17821 caccagtggt aacaccggca ttgcgctggc aatgattgcc gcgcttaaag gctatcgcat
    17881 gaaattgctg atgcccgaca acatgagcca ggaacgccgt gcggcgatgc gtgcttatgg
    17941 tgcggaactg attcttgtca ccaaagagca gggcatggaa ggtgcgcgcg atctggcgct
    18001 ggagatggcg aatcgtggcg aaggaaagct gctcgatcag ttcaataatc ccgataaccc
    18061 ttacgcccat tacaccacta ccgggccgga aatctggcag caaaccggcg ggcgcattac
    18121 ccattttgtc tccagcatgg gaacaaccgg cactatcacc ggcgtttcac gctttatgcg
    18181 cgaacaatcc aaaccggtga ccattgtcgg cctgcagccg gaagaaggca gcagtattcc
    18241 cggcattcgc cgctggcctg cggaatatct gccggggatt ttcaacgctt ctctggtgga
    18301 tgaggtgctg gatattcatc agcgcgatgc ggaaaacacc atgcgcgaac tggcggtgcg
    18361 ggaaggaata ttctgtggcg tcagctcagg cggcgcggtt gctggagcac tgcgggtggc
    18421 aaaagctaac cctggtgcgg tggtggtagc gatcatctgc gatcgtggcg atcgctacct
    18481 ctccaccgga gtgtttgggg aagagcattt tagccagggg gcggggattt aagattattg
    18541 cgcaggcacc gttttatccg tctgcgcaat tagcgcatgt aaaaaaggct gtgcgttctc
    18601 atcgctctta ccggggatct tcacaatata cggcttcccg gtaatcgatg acgacgaagc
    18661 aaccttatca ataaactgct cggcagtgtc aatgcggtta cgggtattgc cgagcttcag
    18721 acgcagatga gaaaccgctt catcgcaggt atgttcatca ccgttgcgca caaatatcaa
    18781 atcctttttc tgtgataatc cctccagcat ggcgttgatg cgggcttctt catgggcagt
    18841 taacttcgcg taagcgggga gtgtcattag tagtgtaatg accagacaaa tgattttctt
    18901 cattgaatta ccttatcctt gttttgtaat agccgatttg actgccagaa tcaggtaaag
    18961 tttcggttgg aatacgatga ggatcatcgg caaggagaaa aaattaaatg agtagtttgt
    19021 tgttgtttaa cgataagagc agggcgctgc aggcggatat cgtcgccgtg cagtcgcagg
    19081 tggtttacgg cagcgtgggc aacagcattg ccgtgcctgc tatcaaacag aacggtctga
    19141 atgtttttgc cgtgccgacg gtattgctga gcaatacgcc gcattatgac actttctacg
    19201 gtggtgcgat tccggatgaa tggtttagcg gttatttgcg tgcgcttcag gagcgtgatg
    19261 cgctgcgcca gctgcgcgct gtaaccacgg gctatatggg aacggcatcg caaatcaaaa
    19321 tccttgccga gtggctgact gcgctacgca aagaccatcc tgacctattg atcatggtcg
    19381 atccggtgat tggcgatatt gatagcggaa tttatgtcaa acctgacctt cccgaggcgt
    19441 atcgacaata tttactgccg ctggcgcagg gaattacccc caatatcttt gagctggaaa
    19501 tcctgaccgg taaaaattgc cgcgatctcg acagtgccat tgctgccgca aaaagtctgc
    19561 tttcagacac attaaaatgg gtggtgatta ccagcgcctc cggtaatgaa gaaaatcagg
    19621 agatgcaggt ggtggtggtc agtgccgaca gcgtgaatgt catttcccat tcacgggtaa
    19681 aaaccgacct gaaagggact ggcgacctgt tttgtgctca gcttatcagt ggtttgctga
    19741 aagggaaggc gttaaacgat gcggtgcacc gtgcggggtt gcgcgtactg gaagtgatgc
    19801 gctacaccca gcagcatgag agcgatgaat tgattttgcc gccgctggcg gaagcataaa
    19861 aaatggcgcc gatgg
//
LOCUS       DADMIB010000071        19781 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.071, whole genome shotgun sequence.
ACCESSION   DADMIB010000071 DADMIB010000000
VERSION     DADMIB010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19781
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.071"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            49..993
                     /locus_tag="JNZ89_002328"
     CDS             49..993
                     /locus_tag="JNZ89_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000261200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY8936191.1"
                     /translation="MVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMIS
                     GYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLW
                     FFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYIN
                     GDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADT
                     WYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGI
                     ELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS"
     gene            complement(1035..1472)
                     /locus_tag="JNZ89_002329"
     CDS             complement(1035..1472)
                     /locus_tag="JNZ89_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiaB family inner membrane protein"
                     /protein_id="HAY8936192.1"
                     /translation="MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYY
                     FAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLS
                     EKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE"
     gene            complement(1518..1859)
                     /locus_tag="JNZ89_002330"
     CDS             complement(1518..1859)
                     /locus_tag="JNZ89_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936193.1"
                     /translation="MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTAT
                     FGNYAYLRAEKLGQLDNFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVC
                     LFGQMRLFRSV"
     gene            complement(2024..2215)
                     /locus_tag="JNZ89_002331"
     CDS             complement(2024..2215)
                     /locus_tag="JNZ89_002331"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936194.1"
                     /translation="MGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAY
                     QPRRETFRRLYQQLLPLMA"
     gene            complement(2148..3476)
                     /gene="xylB"
                     /locus_tag="JNZ89_002332"
     CDS             complement(2148..3476)
                     /gene="xylB"
                     /locus_tag="JNZ89_002332"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004987293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HAY8936195.1"
                     /translation="MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQD
                     PEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCA
                     QECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRM
                     TGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAK
                     AWGMATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHS
                     FCHALPQRWHLMSVMLSAASCLDWVAKLTGLCNVPALIAAAQQADESAEPVWFLPYLS
                     GERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTL
                     IGGGARSEYWRQMLADISGQQLDYRTGGCGASTGRSKAGADCGESREIAH"
     gene            complement(3593..4870)
                     /gene="xylA"
                     /locus_tag="JNZ89_002333"
     CDS             complement(3593..4870)
                     /gene="xylA"
                     /locus_tag="JNZ89_002333"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HAY8936196.1"
                     /translation="MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRF
                     AACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVSFYCFHD
                     VDVSPEGASLKEYINNFAQMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
                     EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVE
                     HKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAG
                     HSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTG
                     GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNS
                     ELGQQILKGQMSLADLAKYAQEHNLSPVHQSGR"
     gene            5236..6207
                     /gene="xylF"
                     /locus_tag="JNZ89_002334"
     CDS             5236..6207
                     /gene="xylF"
                     /locus_tag="JNZ89_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8936197.1"
                     /translation="MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDR
                     DIFVKKAESLGAKVFVQSANGNGETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA
                     KQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN
                     AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALTANNNKIDAVVASNDATAGG
                     AIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN
                     GQEPKADTSLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL"
     gene            6285..7826
                     /gene="xylG"
                     /locus_tag="JNZ89_002335"
     CDS             6285..7826
                     /gene="xylG"
                     /locus_tag="JNZ89_002335"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HAY8936198.1"
                     /translation="MPYLLEMKNITKTFGSVKAIDNVSLRLNAGEIVSLCGENGSGKS
                     TLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENI
                     FLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEQETSVLLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDG
                     QHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKR
                     VNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQA
                     IAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQL
                     KVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQ
                     LVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHV
                     EKQSV"
     gene            7804..8984
                     /gene="xylH"
                     /locus_tag="JNZ89_002336"
                     /pseudo
     CDS             7804..8984
                     /gene="xylH"
                     /locus_tag="JNZ89_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312478.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="xylose ABC transporter permease XylH"
     gene            9062..10240
                     /locus_tag="JNZ89_002337"
     CDS             9062..10240
                     /locus_tag="JNZ89_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XylR family transcriptional regulator"
                     /protein_id="HAY8936199.1"
                     /translation="MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
                     FRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATD
                     NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL
                     ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGI
                     DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS
                     TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI
                     HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNREVML
                     "
     gene            complement(10348..11172)
                     /locus_tag="JNZ89_002338"
     CDS             complement(10348..11172)
                     /locus_tag="JNZ89_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein bax"
                     /protein_id="HAY8936200.1"
                     /translation="MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKAS
                     NKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWL
                     ISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
                     ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPA
                     YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM"
     gene            11492..13522
                     /gene="malS"
                     /locus_tag="JNZ89_002339"
     CDS             11492..13522
                     /gene="malS"
                     /locus_tag="JNZ89_002339"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY8936201.1"
                     /translation="MKLASCFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPK
                     GTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGKYTLQIDTRSGTPT
                     LMISIQNAAEPVANLVRECPKWDGLPLTLDVSATFPEGAAVRDYYSQQIAIVKNGQIT
                     LQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMA
                     EIGTFHGGDLRGLINKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYY
                     TQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYL
                     SGDEVKKTLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNP
                     GFDDLTMSLAFLPDIKTESTTASGLPVFYKNKTDTHAKVIEGFTPRDYLTHWLSQWVR
                     DYGIDGFRVDTAKHVELPAWQQLKTEASSALREWKKTNPDKALDDKPFWMTGEAWGHG
                     VMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDT
                     RLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSA
                     ANVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFVREHGDDKVLVIWAGQQ"
     gene            13700..14953
                     /gene="avtA"
                     /locus_tag="JNZ89_002340"
     CDS             13700..14953
                     /gene="avtA"
                     /locus_tag="JNZ89_002340"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HAY8936202.1"
                     /translation="MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIP
                     EMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIAL
                     TNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELL
                     PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVID
                     NAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
                     ISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHK
                     PEGAIFLWLWFKDLPITTEQLYQRLKARGVLMVPGHNVFPGLDKPWPHTHQCMRMNYV
                     PEPEKIEAGVKILAEEIERAWAESH"
     gene            complement(15104..15577)
                     /locus_tag="JNZ89_002341"
     CDS             complement(15104..15577)
                     /locus_tag="JNZ89_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY8936203.1"
                     /translation="MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRI
                     RVIKDHSWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFG
                     AMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV"
     gene            complement(15679..16527)
                     /gene="yiaJ"
                     /locus_tag="JNZ89_002342"
     CDS             complement(15679..16527)
                     /gene="yiaJ"
                     /locus_tag="JNZ89_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator YiaJ"
                     /protein_id="HAY8936204.1"
                     /translation="MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCP
                     LAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIH
                     IAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
                     KIYMAFGHPDYVKSYWENHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENEL
                     GVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRD
                     DLGAIT"
     gene            16728..17726
                     /gene="yiaK"
                     /locus_tag="JNZ89_002343"
     CDS             16728..17726
                     /gene="yiaK"
                     /locus_tag="JNZ89_002343"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HAY8936205.1"
                     /translation="MKVTFEQLKAAFNRALISRGVDSETADACAEMFARTTESGVYSH
                     GVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAA
                     DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
                     VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRI
                     LPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPT
                     RDAKLQRIMDYVTTAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL"
     gene            17738..18206
                     /locus_tag="JNZ89_002344"
                     /pseudo
     CDS             17738..18206
                     /locus_tag="JNZ89_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418033.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
     gene            18324..18797
                     /gene="yiaM"
                     /locus_tag="JNZ89_002345"
     CDS             18324..18797
                     /gene="yiaM"
                     /locus_tag="JNZ89_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate TRAP transporter small
                     permease YiaM"
                     /protein_id="HAY8936206.1"
                     /translation="MKKILEVILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYL
                     FVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLK
                     TIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA"
     gene            18800..>19781
                     /locus_tag="JNZ89_002346"
     CDS             18800..>19781
                     /locus_tag="JNZ89_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HAY8936207.1"
                     /translation="MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMA
                     QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAM
                     IMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFG
                     VSSGLSISKLFMAGIAPDMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIW
                     ALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTS
                     VVMFLVASAQVSTWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVG"
BASE COUNT         4993 a         4955 c         4803 g         5030 t
ORIGIN      
        1 cagcccaaaa tttactggat tgataacctg cgagggatag cgtgtttaat ggtggtgatg
       61 attcacacca ctacctggta tgtgaccaat gctcatagtg ttagccccgt cacatgggat
      121 atcgccaatg ttctgaattc tgcctctcgt gtcagcgtgc cgctattttt catgatttcc
      181 ggctatctct tttttggcga acgcagcgcc cagccgcgcc atttcttgcg tatcggctta
      241 tgtctgattt tttatagcgc aatcgcactg ctctacattg cgctgtttac ctccatcaat
      301 atggagttag cgctgaaaaa cctgctgcaa aagccagtgt tttaccactt gtggtttttc
      361 ttcgcgattg cggtgattta tctggtttca ccgctgattc aggtgaagaa cgtcggcgga
      421 aaaatgttgc tggtgctaat ggcggtgatt ggcattatcg ctaacccaaa cacagtgccg
      481 cagaaaattg acggttttga atggctgcca attaacttat atatcaatgg cgatactttt
      541 tactacattc tgtatggcat gttgggccgc gctataggga tgatggacac acagcataaa
      601 gcactgtcgt gggtgagcgc cgcgctgttt gcgacggggg tttttattat ctctcgcggg
      661 acattatatg aattgcagtg gcgcggaaat tttgccgata cctggtatct ttactgtggg
      721 ccgatggttt ttatctgcgc aatcgcgcta ttgactctgg ttaaaaacac gctggatacg
      781 cgtaccattc gcggacttgg cttaatctcc cgccattcat tgggtatata cggattccac
      841 gccttgatta tccatgcgct gcgcacccgg ggaattgagc ttaaaaattg gccaatactg
      901 gatattattt ggatcttttg cgcgacgttg gcagcgagtt tgttactttc tatgctggta
      961 caacgaatcg acagaaacag attagtgagt taagtaaaag cccgttcaca ttggactgac
     1021 cgggcttacg tgaattattc gctgtattct tcctgggtaa cctgtgtttc ttttggcggg
     1081 tttattccgg catcacgaat attcttctgc accgctactg caccaaacaa gcttaagaag
     1141 aaagccagtc cataaaaacc tttttcactg agtaataatg tcgcattcca cagacctacc
     1201 atcagtaatg caacagagat aataaagaca gtcaggcagg tcatataata aatggaagtg
     1261 gtcggtatgc cttcatactt gtcccgaacg gtcttttgat aagacgcagc agaaaacagt
     1321 cctaacacca gtacggcaaa ataataccct ttttcattta actgcatctc tgcattccat
     1381 agccctaaca gataggtaac gataccacca acgagagcta tccatgacac aatactaaag
     1441 gccggtgaat aggttgatat tttgttgtcc atcacagtat tcctttcatt cctgaatgtg
     1501 taagagcttt atgttgctca taccgagcga aacaaacgca tttgaccaaa caagcagaca
     1561 aaaaaggcga tggggtagat caccatttca taagcattga taggtgcatt taaaacaccg
     1621 ataaacaaga gaccgatagt gattaacgca actaactggc agatatgggt aaaaaaatta
     1681 tccagttgcc cgagtttttc tgcgcgaaga tatgcatagt taccaaaagt tgctgtcatt
     1741 aacacgccaa gaaaatagcc ttttccactt agcaatgggc atgagatcca tagcccaacc
     1801 agataaacca gcgccccgac aacaaataat agttttgcca cagtttttga ggttttcata
     1861 acgatctcca tatctaccag cgatacatta cgagtaacca acgaaagaca aaactgaaaa
     1921 atgccattaa caaatgattt tcagaataaa ttcatactaa atattaatta gtgagatata
     1981 tagatgtgaa ttatccccca cccggtcagg caggggataa cgtttacgcc attaatggca
     2041 gaagttgctg atagaggcga cggaacgttt cacgtcgtgg ctgataagcg gcataacgct
     2101 gcgcatctgg tagatgcgac tgttctaacg gtagctgcgg caacaactca atgagcgatt
     2161 tctctggatt cgccgcaatc tgcgccagcc ttgctgcgcc cagtgctggc cccacatccc
     2221 cccgtacggt aatcgagctg ctgaccgctg atatccgcca gcatctgacg ccagtactca
     2281 ctacgcgccc cgccaccaat caacgtaaca ctttgcggtt taatgccgca ggcatgcacg
     2341 acatccatgc catctgccag cgcataaccc acgccttcca gcactgctcg cgccagttca
     2401 ttggggccat gttgatgagt caaaccaaag aaaaccccct tcgcctgggg attattgtgt
     2461 ggtgtacgct cgccggaaag ataaggcaga aaccaaactg gctcggcact ttcatcagcc
     2521 tgttgagctg cagcgattaa agctgggaca ttgcacaggc cggttaattt cgcgacccaa
     2581 tccagacacg atgctgcact cagcattaca gacattaaat gccaacgctg cggtagcgca
     2641 tggcaaaagc tgtgtacagc gctttctggc ttgcttaaga acccttcgct gacagcaaaa
     2701 tagacccccg acgtccccag cgataacatt gcctgattag catcaaccat tcccacacca
     2761 actgcaccag ctgcattgtc gccaccgcct gcgacaactg gcaccgtcgc cataccccac
     2821 gctttcgcaa cttcaggtaa caaagcacca gtaatttcgc tgccttcgta taatgcgggc
     2881 atctggtcac gagataagtc gcaagcctgc agcatgacgt cactccagtc acgctttgcg
     2941 acatccagcc acatggtgcc agctgcgtca gacatatcgc tggcaaactc ccccgtcata
     3001 cgcagacgca agtaatcttt cggtaataat actttgtcga tttgacggaa tatctccggc
     3061 tcatgccgct gaacccatag caatttaggc gcagtaaatc cgggcatcat caggttgccg
     3121 gtaatcactc gtgattgcgg aactctcgct tccagcaaag tgcactcttg cgcacagcgc
     3181 ccgtcgttcc acaaaatggc agggcgcaat acccgttgtt gagcatccag taaggttgct
     3241 ccatgcatct ggccggcaat acccaatgct ttaacgtcct gcagagaatg ctgatcgccc
     3301 agagctttca ttgcgcgatc agttgcctgc caccactgtt ccgggtcttg ttccgaccag
     3361 agtggatgcg ggcgcgaaac ggtcagcttt tccgtttgcg aagcaaccac ctcaccctgc
     3421 tcgttgagca aaataacttt tacgcccgag gtgccaagat ctatcccgat atacatatcg
     3481 atcgttcctt aaaaaaatgc ccggtatcgc taccgataac cgggccaacg gactgcacag
     3541 ttagccgtta tttgtcgaac agataatgat ttaccagatt ttccagttgc tcctagcgac
     3601 cactctgatg caccggagac aaattatgtt cctgagcata tttggctaaa tctgccagtg
     3661 acatttggcc tttcaggatt tgctggccca attcgctatt ccagccggaa taacgctgcg
     3721 cgatgcgttt atccagctcg ccatcttcaa tcatgcgcgc tgcaattttc agcgccagtg
     3781 ccatcgtatc catcgcgccg atatgaccgt aaaacagatc atatttatca gtactttgac
     3841 gacgtacttt ggcatcgaag ttcagaccac cggtggtgaa accgcctgct ttgagaattt
     3901 catacatcac cagcgcattc tcttccacac tgttcgggaa ctggtcggtg tcccagccca
     3961 gttgcgcatc gccacggttg gcgtcgacag aaccgaacag gccaagcgca atggcggtgg
     4021 ctatttcatg atggaaagag tgacctgcca gcgtcgcgtg gttagcttca atgttcagtt
     4081 taatctcttt ttccagacca aactgtttca ggaagccata gaccgtcgcg gcatcgtaat
     4141 catattgatg tttagtcggt tcttgcggtt tcggttcgat aagcaacgtg ccctggaagc
     4201 cgattttatg tttatgctca accaccatct gcataaagcg gcccagttgt tcacgctcct
     4261 gacgcaagtc ggtatttaac agcgtttcgt aaccttcacg accaccccac aggacatagt
     4321 tttcaccgcc caatttatgg gttgcttcca tcgctgtaac aacttgcgtt gccgcccagc
     4381 tgaagacttc aggatctggg ttcgtcgccg cacccgcgcc atagcgaggg tttgtaaagc
     4441 agttagcggt tccccacagc agcttcacgc cgctctcttc ttgcttggct gccaggacat
     4501 caaccatttg cgcaaaatta ttgatgtact cttttaacga cgcgccctca ggggaaacat
     4561 ccacatcgtg gaagcaataa aatgacacat gtaacttgtg gaaaaactca aatgcgacat
     4621 ctgctttacg cttcgccaac gccagtgcct caccaggctg ctgccacgga cgattaaacg
     4681 cccccacacc aaacatgtcc gccccgttcc agcagaaggt gtgccagtaa caggcggcaa
     4741 aacgcaagtg ctcttccata cgcttaccca acaccagttc gtcgggattg tagtgacgga
     4801 atgctaacgg gtttgaggat tttgagcctt cataacgaac gcgatcgagc tggtcaaaat
     4861 aggcttgcat attgaactcc ataatcaggt aatgccgcgg gtgatggatg atgtcgtaat
     4921 attgggcact ccctttcagt tgctcaatta tgttatttca cactgctatt gagataattc
     4981 acaagtgtgc gctcgctcgc aaaataaaat gggatgatga aactgggtaa ttcctcgaag
     5041 ataaaaatgc aataagtaca attgcgcaac aaaagtaaga tctcggtcat aaatcaagaa
     5101 ataaaccaaa aatcgtaatc gaaagataaa aatctgtaat tgttttcccc tgtttagttg
     5161 ctaaaaattg gttacgttta tcgcggtgat tgttacttat taaagctgtc ctctaactac
     5221 agaaggccct acaccatgaa aataaagaac attctactca ccctttgcac ctcacttctg
     5281 cttaccaacg ttgcggcaca cgccaaagaa gtcaaaatag gtatggcgat tgatgatcta
     5341 cgtcttgaac gctggcaaaa agatcgagat atttttgtga aaaaggctga atctctcggt
     5401 gcgaaagtat ttgtacagtc tgcaaatggc aatggagaaa cacaaatgtc gcagattgaa
     5461 aacatgatta accggggtgt cgatgttctt gtcattattc catataacgg ccaggtatta
     5521 agtaacgttg taaaagaagc caaacaagaa ggtattaaag tattagctta cgaccgtatg
     5581 attaacgatg cggatatcga tttttatatt tctttcgata acgaaaaagt cggtgaactg
     5641 caggcaaaag ccctggtcga tattgttccg caaggtaatt acttcctgat gggcggctcg
     5701 ccggtagata acaacgccaa gctgttccgc gccggacaaa tgaaagtgtt aaaaccttac
     5761 gttgattccg gaaaaattaa agtcgttggt gaccaatggg ttgatggctg gttaccggaa
     5821 aacgcgctaa ccgccaataa taacaaaatt gatgctgtag ttgcctcaaa cgatgccacc
     5881 gcaggtgggg caattcaggc attaagcgcg caaggtttat cagggaaagt agcaatttcc
     5941 ggccaggatg cggatctcgc aggtattaaa cgtattgctg ccggtacgca aactatgacg
     6001 gtgtataaac ctattacatt gctggcaaat actgccgcag aaattgccgt tgaattgggc
     6061 aatggtcagg agccaaaagc agatacctca ctgaataatg gcctgaaaga tgtcccctcc
     6121 cgcctcctga caccgatcga tgtgaataaa aacaacatca aagatacggt aattaaagac
     6181 ggattccaca aagagagcga gctgtaagcg ttacgccccg gcgcggagcg ggggcgtgat
     6241 ttctctccat gccgcgtgaa tgaattggct taggtggagt cgttatgcct tatctacttg
     6301 aaatgaagaa cattaccaaa accttcggca gtgtgaaggc gattgataac gtcagcttgc
     6361 ggttgaatgc tggcgaaatc gtctcactct gtggggaaaa tgggtctggt aaatcaacgc
     6421 tgatgaaagt gctgtgtggt atttatcccc atggctccta cgaaggcgaa attatttttg
     6481 cgggagaaga gattcaggcg agtcacatcc gcgataccga acgcaaaggt atcgccatca
     6541 ttcaccagga attggccctg gtgaaagaat tgaccgtgct ggaaaatatc ttcctgggta
     6601 acgaaataac ccacaatggc attatggatt atgacctgat gacgctacgc tgtcagaagc
     6661 tgctcgcaca ggtcagttta tccatttcac ctgatacccg cgttggcgat ttagggcttg
     6721 ggcaacaaca actggttgaa attgccaagg cacttaataa acaggtgcgc ttgttaattc
     6781 tcgatgaacc gacagcctca ttaactgagc aggaaacgtc ggttttactg gatattattc
     6841 gcgatctaca acagcacggt atcgcctgta tttatatttc gcacaaactc aacgaagtca
     6901 aagcgatttc cgatacgatt tgcgttattc gcgacggtca gcacattggt acgcgtgatg
     6961 ctgccggaat gagtgaagac gatattatca ccatgatggt cgggcgagag ttaaccgcgc
     7021 tttaccctaa tgaaccacat accaccggag atgaaatatt acgtattgaa catctgacgg
     7081 catggcatcc ggttaatcgt catattaaac gagttaatga tgtctcgttt tccctgaaac
     7141 gtggcgaaat actgggtatt gccggactcg ttggtgccgg acgtaccgag accattcagt
     7201 gcctgtttgg cgtgtggccc ggacaatggg aaggaaaaat ttatattgat ggcaaacagg
     7261 tagatattcg taactgtcag caagccatcg cccaggggat tgcgatggta cccgaagaca
     7321 gaaagcgcga cggcatcgtt ccggtaatgg cggttggtaa aaatattacc ctcgccgcac
     7381 tcaataaatt taccggtggc attagccagc ttgatgacgc ggcagagcaa aaatgtattc
     7441 tggaatcaat ccagcaactc aaagttaaaa cgtcgtcccc cgatcttgct attggacgtt
     7501 tgagcggcgg caatcagcaa aaagcgatcc tcgcccgctg tctgttactc aacccgcgca
     7561 ttctcattct tgatgaacct accaggggta ttgatattgg cgcgaaatat gagatctaca
     7621 aattaattaa ccaactcgtc cagcagggta ttgccgttat tgtcatctct tccgaattac
     7681 ctgaagtgct cggccttagc gatcgtgtac tggtgatgca tgaagggaaa ctaaaagcca
     7741 acctgataaa tcataacctg actcaggagc aggtgatgga agccgcattg aggagcgaac
     7801 atcatgtcga aaagcaatcc gtctgaagtg aaattggccg taccgacatc cggtggcttt
     7861 tccgggctga aatcactgaa tttgcaggtc ttcgtgatga ttgcagctat catcgcaatc
     7921 atgctgttct ttacctggac caccgatggt gcctacttaa gcgcccgtaa cgtctccaac
     7981 ctgttacgcc agaccgcgat taccggcatc ctcgcggtag gaatggtgtt cgtcataatt
     8041 tctgctgaaa tcgacctttc cgtcggctca atgatggggc tattaggtgg cgtcgcggcg
     8101 atttgtgacg tctggttagg ctggcctttg ccacttacca tcattgtgac gttggttctg
     8161 ggactgcttc tcggtgcgtg gaacggatgg tgggtcgcgt accgtaaagt cccttcattt
     8221 attgtcaccc tcgcgggcat gttggcattt cgcggcatac tcattggcat caccaacggc
     8281 acgactgtat cccccaccag cgccgcgatg tcacaaattg ggcaaagcta tctccccgcc
     8341 agtaccggct tcatcattgg ccgcttggct taatggcttt tgttggttgg caatggcgcg
     8401 gaagaatgcg ccgtcaggct ttgggtttac agtctccggc ctctaccgca gtagtcggtc
     8461 gccaggcttt aaccgctatc atcgtattag gcgcaatctg gctgttgaat gattaccgtg
     8521 gcgttcccac tcctgttctg ctgctgacgt tgctgttact cggcggaatg tttatggcaa
     8581 cgcggacggc atttggacga cgcatttatg ccatcggcgg caatctggaa gcagcacgtc
     8641 tctccgggat taacgttgaa cgcaccaaac ttgccgtgtt cgcgattaac ggattaatgg
     8701 tagccatcgc cggattaatc cttagttctc gacttggcgc tggttcacct tctgcgggaa
     8761 atatcgccga actggacgct attgcagcat gcgtgattgg cggcaccagc ctggctggcg
     8821 gtgtgggaag cgttgccgga gcagtaatgg gggcatttat catggcttca ctggataacg
     8881 gcatgagtat gatggatgta ccgaccttct ggcagtatat cgttaaaggt gcgattctgt
     8941 tgctggcagt atggatggac tccgcaacca aacgccgttc ttgattttga taaaaatttt
     9001 ctcaaagccg gttacgtatt accggttttg agtttttgca tgattcagca ggaaaagaac
     9061 catgtttact aaacgtcacc gcatcacatt actgttcaat gccaataaag cctatgaccg
     9121 gcaggtagta gaaggcgtag gggaatattt acaggcgtca caatcagaat gggatatttt
     9181 cattgaagaa gatttccgcg cccgcattga taaaatcaag gactggttag gagatggcgt
     9241 cattgccgac ttcgacgaca aacaaatcga gcaagcgctg gctgatgtcg acgtccccat
     9301 tgttggggtt ggcggctcgt atcaccttgc agaaagttac ccacccgttc attacattgc
     9361 caccgataac tatgcgctgg ttgaaagcgc atttttgcat ttaaaagaga aaggcgttaa
     9421 ccgctttgct ttttatggtc ttccggaatc aagcggcaaa cgttgggcca ctgaacgcga
     9481 atatgcattt cgtcagcttg tcgccgaaga aaagtatcgc ggagtggttt atcaggggtt
     9541 agaaaccgcg ccagagaact ggcaacacgc gcaaaatcgg ctggcagact ggctacaaac
     9601 gctgccaccg caaaccggga ttattgccgt tactgacgcc cgggcgcggc atattctgca
     9661 agtatgtgaa catctacaca ttcccgtacc ggaaaaatta tgcgtgattg gcatcgacaa
     9721 cgaagaactg acccgctatc tgtcgcgtgt cgccctttct tcggtcgctc agggcgcgcg
     9781 gcaaatgggc tatcaggcgg caaaactgtt gcatcgatta ttagataaag aagaaatgcc
     9841 gctacagcga attttggtcc caccagttcg cgtcattgaa cggcgctcaa cagattatcg
     9901 ctcgctgacc gatcccgccg ttattcaggc catgcattac attcgtaatc acgcctgtaa
     9961 agggattaaa gtggatcagg tactggatgc ggtcgggatc tcgcgctcca atcttgagaa
    10021 gcgttttaaa gaagaggtgg gtgaaaccat ccatgccatg attcatgccg agaagctgga
    10081 gaaagcgcgc agtctgctga tttcaaccac cttgtcgatc aatgagatat cgcaaatgtg
    10141 cggttatcca tcgctgcaat atttctactc tgtttttaaa aaagcatatg acacaacgcc
    10201 aaaagagtat cgcgatgtaa atcgtgaggt catgttgtag cgatgatgag aattgtcggc
    10261 gtcacatcag ggaactcagc acagccacct gatgcgagca aaagccttat ccgaccgaca
    10321 aatcagataa ggctcaagga aatgcaatta catatgcgcc gcgattaacc gttggttatc
    10381 ctggtacatt gcgaacaggt agttattata actcttccct ttggtcgagt agcccttcag
    10441 cttgtgaatc atcgctgtgg cagtcacttc ctgatccgct ttacgcagct gcgcacgcga
    10501 tttacggaac gaagagtaag ccgggtgcgt attcaggtta gtgacatagg cgctcaccga
    10561 ttctttgaca gaactaaact gtgagtaccc tttcacttta cccggcgcat tggtacaacg
    10621 tcctttcatg catttcatgc cgaacagatt gttattgttg cgcgccagct tcgacgttcc
    10681 ccaaccgctt tctgctgcag ccatcgtcgc caccatactg gtagggataa tgtctacgcg
    10741 ttcaagcaag gtattccacg ggatttttcg cgtattacca gaccacttca ccttgtagcg
    10801 tttggcgatg tctttcagac gcgcacgctc agcaggtgac cattggccct gatactgttt
    10861 tgaaatcagc cagttacgtt ctgcagtaat ggctgcattt tggctggtaa tgtaaggcat
    10921 tacggtccgg agaaacgcct ttttccttgg tgttccggaa gggtattttc gcaaatcagg
    10981 aagtgaacta ctctttgcac tattgcgaga atactcttgt ttactgctta cctgtttatt
    11041 actagcttta gttaagtggg acttttgact cgctgttgtt gtgtgcgtct tcgctaacac
    11101 ctcactcgaa aacaccagag tgagtaacat aagaatcatc gccccatatc gtcgtatggg
    11161 agtcaaaatc atcaggtctc ctggtcggat ttaatcattc caacacctta tatttttcac
    11221 aaatttgaga gttgaatctc aaatcatatc aaaaatagct gtcaagagca ccccaaggaa
    11281 tagtccaaat ctgaaactat gtcacgagtt aacgattcag attggcgcta aatcgcagaa
    11341 aatgtggggt ttatcgcaaa attcagccgt tttttgcgcg cgatcgctca cccttgcttc
    11401 tcatcctgtg gacttaccgc tcaggaatga gttttgtctg gcttatcgct ggcaaactgt
    11461 ctgaaatcgc agcaataagg actcatccac catgaaactc gcctcctgtt ttctgacact
    11521 ccttcctggc ttcgccgttg ccgccagctg gacttctccg gggttccctg cctttagcga
    11581 acagggaacg ggaacatttg tcagccacgc gcagttgccc aaaggtacgc gtccactcac
    11641 gctaaatttt gaccaacagt gctggcagcc tgcagatgcg ataaaactca atcagatgct
    11701 ttccctgcaa ccttgtagca acacgccgcc tcaatggcga ttgttcaggg acggcaaata
    11761 tacgctgcaa atagacaccc gctccggtac gccaacattg atgatttcca tccagaacgc
    11821 cgccgaaccg gtagcaaacc tggtccgtga atgcccgaaa tgggatggat taccgctcac
    11881 gctggatgtc agcgccactt tcccggaagg agccgccgta cgggattatt acagccagca
    11941 aattgcgata gtgaagaacg gtcaaataac gttacaaccc gctgctacca gcaacggttt
    12001 actcctgctg gaacgggcag aaactgacac atccgcccct ttcgactggc ataacgccac
    12061 ggtttacttt gtgctgacag atcgtttcga aaacggcgat cccagtaatg accagagtta
    12121 cggacgtcat aaagacggta tggcggaaat tggcactttt cacggcggcg atttacgcgg
    12181 cctgatcaac aaactggatt acctccagca gttgggcgtt aatgctttat ggataagcgc
    12241 cccatttgag caaattcacg gctgggtcgg cggcggtaca aaaggcgatt tcccgcatta
    12301 tgcctaccac ggttattaca cacaggactg gacgaatctt gatgccaata tgggcaacga
    12361 agccgatcta cggacgctgg ttgatagcgc acatcagcgc ggtattcgta ttctctttga
    12421 tgtcgtgatg aaccacaccg gctatgccac gctggcggat atgcaggagt atcagtttgg
    12481 cgcgttatat ctttctggtg acgaagtgaa aaaaacgctg ggtgaacgct ggagcgactg
    12541 gaaacctgcc gccgggcaaa cctggcatag ctttaacgat tacattaatt tcagcgacaa
    12601 aacaggctgg gataaatggt ggggaaaaaa ctggatcaga acggatatcg gcgattacga
    12661 caatcctgga ttcgacgatc tcactatgtc gctggccttt ttgccggata tcaaaaccga
    12721 atcaactacc gcttctggtc tgccggtgtt ctataaaaac aaaacggata ctcacgctaa
    12781 agtcatcgaa ggctttacac ctcgcgatta cttaacccac tggttaagtc agtgggtccg
    12841 cgactatggg attgatggtt ttcgggtcga taccgccaaa catgttgagt tgcccgcctg
    12901 gcagcaactg aaaaccgaag ccagctccgc gcttcgcgaa tggaaaaaaa ctaaccccga
    12961 caaagcatta gatgacaaac ctttctggat gaccggtgaa gcctggggcc acggcgtgat
    13021 gcaaagtgac tactatcgcc acggcttcga tgcgatgatc aatttcgatt atcaggagca
    13081 ggcggcgaaa gcagtcgatt gtctggcgca gatggatacg acctggcagc aaatggcgga
    13141 gaaattgcag ggtttcaacg tgttgagcta cctctcgtcg catgataccc gtctgttccg
    13201 tgaagggggc gacaaagcag cagagttatt actattagcg ccaggcgcgg tacaaatctt
    13261 ttatggcgat gaatcctcgc gtccgttcgg tcctacaggt tctgatccgc tgcaaggtac
    13321 acgttcggat atgaactggc aggatgttag cggtaaatct gccgccaacg tcgcgcactg
    13381 gcagaaaatc agccagttcc gcgcccgcca tcccgcaatt ggcgcgggca aacaaacgac
    13441 actttcgctg aagcagggct acggctttgt tcgtgagcat ggcgacgata aagtgctggt
    13501 catctgggct gggcaacagt gacttttccg gcttcccgtt catcagtacc tcgggaagcc
    13561 gccaaccagg ataaaatgtc agccctaatc agcgttgcag gataaagcac cgctcactct
    13621 tcaacagacc gatttgcacc ccagcaaatg tagcgttatt gttaccttcc ttgctacaga
    13681 gttcgacaga tatcccgcta tgacattctc cctttttggt gacaaattta cccgccactc
    13741 cggcattacg ctgctgatgg aagatctgaa cgacggttta cgcacgcctg gcgcgattat
    13801 gctcggcggc ggtaatccgg cgcagatccc ggaaatgcag gactacttcc agacgctact
    13861 gaccgacatg ctggaaagtg gcaaagcgac tgatgcactg tgtaactacg acggtccaca
    13921 ggggaaaacg gagctactca cactgcttgc cggaatgctg cgcgagaagt tgggttggga
    13981 tatcgaacca cagaatattg cactaacaaa cggcagccag agcgcgtttt tctacttatt
    14041 taacctgttt gccggacgcc gtgccgatgg tcgggtcaaa aaagtgctgt tcccgctggc
    14101 accggaatac attggctacg ctgacgccgg actggaagaa gatctgtttg tctctgcgcg
    14161 tccgaatatt gaactgctgc cggaaggcca gtttaaatac cacgtcgatt ttgagcatct
    14221 gcatattggc gaagaaaccg ggatgatttg cgtctcccgg ccgacgaatc caacaggcaa
    14281 tgtgattact gacgaagagt tgctgaagct tgacgcgctg gcgaatcaac acggcattcc
    14341 gctggtgatt gataacgctt atggcgtccc gttcccgggt atcatcttca gtgaagcgcg
    14401 cccgctatgg aatccgaata tcgtgctgtg catgagtctt tccaagctgg ggctgcctgg
    14461 ctcccgctgc ggcattatca tcgccaatga aaaaatcatc actgccatca ccaatatgaa
    14521 cggcattatc agcctggcac ctggcggtat tggtccggcg atgatgtgtg aaatgattaa
    14581 gcgtaacgat ctgctgcgcc tgtctgaaac agtcatcaaa ccgttttact accagcgtgt
    14641 tcaggaaact atcgccatca ttcgccgcta tttaccggaa aatcgctgcc tgattcataa
    14701 accggaagga gccattttcc tctggctatg gtttaaggat ttgcccatta cgaccgagca
    14761 gctctatcag cgcctgaaag cacgcggcgt gctgatggtg ccggggcaca acgtcttccc
    14821 gggactggat aaaccgtggc cgcatacgca tcaatgtatg cgcatgaact acgtaccaga
    14881 gccggagaaa attgaggcgg gggtgaagat tctggcggaa gagatagaaa gagcctgggc
    14941 tgaaagtcac taaaaattgc ctgatgcgct acgcttatca ggcctacatg atttctgcaa
    15001 tatattgaat ttggaagaat ttgtaggccg gataaggcgt ttacgccgca tctggcataa
    15061 acaaagcgca ctattccggc gttgagaaac gccggaaaac gtttcaaaca ggctgctgcc
    15121 gtagccgatg ccgctgcact ttctcgacat ccatgcactg caacgccttt gtcgggcagg
    15181 cttcaacaca ggccggcccc gtctcccgat gccagcacag atcgcactta atcgccctcg
    15241 cctttttgcg cgaagaaacg acctccatcg caccaaacgg gcaagccagc atacagcttt
    15301 tacagccaat gcaacgtgtt tgttcaacga aaatatgccc atgttcgcgg cttatcgcgt
    15361 caacagggca gacattcgcg cacggtgcat cttcacactg atgacaggct actgccgtgg
    15421 tccagctgtg gtctttaatg acacgaatac gggaaataaa ctcgtctggt gacaacgcag
    15481 cgcaatcctg attctcctga tgcgacactg cgcaagccac ttcacaggta cggcaaccga
    15541 tacatttcgt cgcatccgca ataataaacc ggttcatgat cactcctttg cactaaaaca
    15601 gcagagtgcc agagagcgcg tccctactgc tttgatccaa cgaaggaaat gttaaagttt
    15661 tggcacttgt ccaaagcgtt atgtgatcgc gcccaggtca tccctgacag taaatcccag
    15721 ttcattagaa atagcctgcg cggtttcacg cagtggtttc aggagatttt tctctcccac
    15781 ctgtttcaga cgtgatgtcg aaagcgaaat cgacacggcg tacggcaccc gcccatgaat
    15841 atcaaacacc ggaacagcaa tacaggagac gccgagttcg ttttcttctc tgtccatcgc
    15901 cgctccgctt tcacgaatgt gcgccagttc gtcgaacatc gcgggcagct cggtaatggt
    15961 attgcgggtt aacggctgga tctcatgctg atggttttcc cagtatgact tcacgtagtc
    16021 cgggtgacca aacgccatgt agatcttgcc cattgcggaa cagtagagcg gcatatgctg
    16081 gccaatatag gcacgggttc gcagcatccc ggttgtgggt tccagcttat aaatcaaaat
    16141 agcgtgatcg tcttcgcggc tggagaagtt aatggtttca ccagtggcga tgttcagtgc
    16201 ctcaagatgc ggagcggcga tatgaatgat attcagcgaa gacagcgcct tctgcccgac
    16261 ggcaataaat ttggtagtca ggcggtaact ccctgcggcg ggcgcggtgg tcacatagcc
    16321 gcaggactgt aatccctgca ataagcgatg gacggtactc ttatttaaac cagccagctc
    16381 cgaaagatgc gccaacggac aaccgtttgg atagttgctc aaaatctcaa tcagcatcaa
    16441 cccgcgaaac agactctggc ttccggctgg acgctctttt tcctgcgcca tctcgttctc
    16501 tttttttccc atcacttctt tccccatttt gtcgcgtcct gatggtagcg caaagtgtgc
    16561 cgtagttcac gatctcgaca gataatttat aaccacttga tttttatgtc ttttgaaatt
    16621 catcaatcag attgctttgt taaaaagtga tcgatatatt tgaaatcaag tttcgcatat
    16681 tgaaatttta agccaaaaaa gcgatcaaaa aaacaaggaa gcctgggatg aaagtgacat
    16741 ttgagcagtt aaaagcagcc tttaatcggg ccttaatttc acgcggcgtt gacagcgaaa
    16801 cggctgacgc ctgtgcagag atgttcgccc gcaccaccga atccggcgtt tattctcacg
    16861 gcgttaatcg tttccctcgt ttcattcaac aactggaaaa cggcgatatc attcctgatg
    16921 cccaacccaa acgtataacc agcctcggcg caattgaaca gtgggatgcc cagcgttcga
    16981 tcggcaacct gacggcgaaa aagatgatgg atcgcgccat tgaactggct gccgatcacg
    17041 gtattggtct ggtggcactt cgtaatgcca accactggat gcgcggcggc agctacggct
    17101 ggcaggcggc ggaaaaaggc tatattggca tttgctggac caactccatc gccgtaatgc
    17161 cgccgtgggg cgcaaaagag tgtcgcattg gcactaaccc gctgatcgtc gccattcctt
    17221 ccacgccgat caccatggtc gatatgtcga tgtcgatgtt ctcttacggc atgttagaag
    17281 ttaaccgcct ggcgggccgt cagctcccgg tcgatggtgg ctttgatgat gagggcaatt
    17341 tgaccaaaga acctggcgtt atcgagaaga atcgccgcat tttgccgatg ggctactgga
    17401 aaggttctgg catgtcgatt gtgctggata tgatcgctac tctcctttcc gacggcgcat
    17461 cggttgccga agtcacccag gacaacagcg acgaatacgg catttcacaa atttttattg
    17521 ccattgaagt ggacaagctt atcgacggtc ccacccgcga tgccaagctg caacgcatca
    17581 tggattacgt tactaccgct gaacgcgctg acgaaaacca ggccatccgc ttacccggcc
    17641 acgaatttac taccctgctg gccgaaaacc gccgtaacgg catcactgtt gatgacagcg
    17701 tgtgggccaa aatccaggcg ttatgaggag ataagtcatg atttttggac atatcgcgca
    17761 gcccaatccg tgccgtttgc ccgccgccat tgaaaaggcg ctcgattttc tgcgcgctac
    17821 caacttcaac gtcctggagc cgggcgttgt cgaaatcgac ggcaagaata tttatgcgca
    17881 aattatcgat ttaaccacac gcgaagcggt ggaaaaccgt ccggaagtgc atcgtcggta
    17941 tatcgatatt cagtttctgg cgtggggtca agagaaaatc ggcattgcta ttgatacagg
    18001 aaataataaa gtcagcgaat cactattaga gcagcgcgat attatttttt atcatgtcag
    18061 tgaacatgaa tcatttatag aaatgatacc gggcagctac gctattttct tcccgcagga
    18121 tgttcaccga ccaggttgta ttctgcaaac aggcctctga gatacgaaaa attgtggtta
    18181 aagtcgcatt aacagcgctg aattaatcaa ataatcgtct acgccagaac gactgggtaa
    18241 tgttattgct ctaactatat taataattta ggttgctgca catgcaactt gaattatgac
    18301 agacatagcc tcaaggaata gctatgaaaa aaatacttga agtaatactg gcgattaatc
    18361 tcgccgtact ttcctgtatt gtgtttataa acattatttt aagatatggt tttcagacaa
    18421 gcattttatc tgtagatgaa ttgtcacgtt atttatttgt ctggttaaca tttattggcg
    18481 cgattgtggc ttttatggat aacgcccacg ttcaggtcac ctttctggtg gagaaactct
    18541 cccccgcatg gcaacgacga gtcgctctgg ttacccattc cttaatctta tttatttgtg
    18601 gcgcactggc ctggggcgca acactaaaaa caattcagga ctggagcgat tattcaccga
    18661 tcctcggttt gcccatcggc ctgatgtatg ccgcttgtct gcccaccagc ctcgttatcg
    18721 cattctttga actgcgtcat ttatatcaac tcatcacgcg tagcaattct ctaacgtcgc
    18781 caccgcaagg agcttaatca tggctgtgct gatttttctg ggctgtctgt tgggtggtat
    18841 tgctatcggt ttgcctattg cctgggcact gttgttgtgc ggggcggcgt taatgttctg
    18901 gctggacatg tttgatgtcc agatcatggc acaaacgctg gtgaacggag ccgatagctt
    18961 ctccctgctg gcgattccgt tctttgtgct ggcgggtgaa atcatgaatg cgggcggctt
    19021 gtcaaaacgc attgttgacc tgccgatgaa actggtgggg cataaaccag gcgggctggg
    19081 ctacgtcggc gtgctggcag ctatgattat ggcgagcctt tctggttctg ccgttgcgga
    19141 taccgccgcc gttgccgctc tactggtgcc gatgatgcgc agcgccaact acccggtcaa
    19201 ccgggcggcg gggctgattg cctctggcgg cattatcgcg ccaattattc ccccttccat
    19261 tccgtttatt atcttcggcg tttccagcgg attatccatc agtaagctgt ttatggcggg
    19321 cattgcccct gacatgatga tgggcgcaac gctgatgctt acctggtggt ggcaggccag
    19381 tcgccttaat ttaccccgcc agcaaaaagc aacgatgcag gaaatctggc actcttttgt
    19441 ctccggtatc tgggctctgt ttcttccagt catcattatt ggcgggtttc gctccggtct
    19501 gtttacccct accgaagccg gggccgttgc tgctttctat gcgctgtttg tcgccacagt
    19561 tatttaccgt gaaatgacct tcgccacact ttggcatgta ctcattggcg cggcgaaaac
    19621 cacctcagtg gttatgtttc tggtggcctc ggcacaagtt tccacctggc tgattaccat
    19681 tgctgaactg ccgatgatgg tttctgattt actgcaaccg ttggtcgatt caccgcgtct
    19741 gctgtttatc gtcattatgg tggctatcct gattgtcggc a
//
LOCUS       DADMIB010000072        19544 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.072, whole genome shotgun sequence.
ACCESSION   DADMIB010000072 DADMIB010000000
VERSION     DADMIB010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19544
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.072"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            56..1285
                     /locus_tag="JNZ89_002347"
                     /pseudo
     CDS             56..1285
                     /locus_tag="JNZ89_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708324.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
     gene            1275..2990
                     /gene="hyfG"
                     /locus_tag="JNZ89_002348"
     CDS             1275..2990
                     /gene="hyfG"
                     /locus_tag="JNZ89_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfG"
                     /protein_id="HAY8936208.1"
                     /translation="MNVNSSSNSGEAILAALKTQFPGAVLDEERQTPEQVTITVKINL
                     LPDVVHYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSR
                     EFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLHKDAMDYRL
                     RPEPTTDSETYAFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYV
                     HRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSI
                     LLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGG
                     VRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDYSPV
                     GPLIRGSGFARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFA
                     LDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANW
                     PVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRN
                     RSPLK"
     gene            3000..3539
                     /gene="hyfH"
                     /locus_tag="JNZ89_002349"
     CDS             3000..3539
                     /gene="hyfH"
                     /locus_tag="JNZ89_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit H"
                     /protein_id="HAY8936209.1"
                     /translation="MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACG
                     ACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA
                     DLYTRATFHLQRCSRCERPFAPQKTVALAAELLAQQQNAPQNREMLRAQASVCPECKQ
                     RATLINDDTDVPLVAKEQL"
     gene            3536..4294
                     /gene="hyfI"
                     /locus_tag="JNZ89_002350"
     CDS             3536..4294
                     /gene="hyfI"
                     /locus_tag="JNZ89_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfI"
                     /protein_id="HAY8936210.1"
                     /translation="MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGC
                     NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH
                     KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ
                     QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD
                     PTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD"
     gene            4287..4700
                     /gene="hyfJ"
                     /locus_tag="JNZ89_002351"
     CDS             4287..4700
                     /gene="hyfJ"
                     /locus_tag="JNZ89_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 assembly chaperone HyfJ"
                     /protein_id="HAY8936211.1"
                     /translation="MTEECGEIVFWTLRKKFVASSDEMPEHRSQVMYYSLAIGHHVGV
                     IDCLNVAFRCPLTENEDWLAQVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFALLA
                     DDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA"
     gene            4730..6742
                     /locus_tag="JNZ89_002352"
                     /pseudo
     CDS             4730..6742
                     /locus_tag="JNZ89_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416986.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
     gene            6764..7470
                     /locus_tag="JNZ89_002353"
                     /pseudo
     CDS             6764..7470
                     /locus_tag="JNZ89_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001698835.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
     gene            7421..7609
                     /locus_tag="JNZ89_002354"
     CDS             7421..7609
                     /locus_tag="JNZ89_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000886534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
                     /protein_id="HAY8936212.1"
                     /translation="MPFAISPPPFWQLAHSSADNFPALTVSHFITANLLPVMLGNIIG
                     GAVLVSMCYRAIYLRQES"
     gene            complement(7647..8708)
                     /locus_tag="JNZ89_002355"
     CDS             complement(7647..8708)
                     /locus_tag="JNZ89_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HAY8936213.1"
                     /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV
                     AIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD
                     MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL
                     TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL
                     EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT
                     EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
                     ATLIKAVIHAWPDGQIAQE"
     gene            8921..10384
                     /gene="bepA"
                     /locus_tag="JNZ89_002356"
     CDS             8921..10384
                     /gene="bepA"
                     /locus_tag="JNZ89_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-barrel assembly-enhancing protease"
                     /protein_id="HAY8936214.1"
                     /translation="MFRQLKKNLVATLIAAMTIGQVAPAFADNADTLPDMGTSAGSTL
                     SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND
                     EINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHLTQRHLARAMEDQQRSTPLT
                     WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD
                     PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL
                     AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQP
                     LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP
                     QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
                     SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM"
     gene            10405..10764
                     /gene="arsC"
                     /locus_tag="JNZ89_002357"
     CDS             10405..10764
                     /gene="arsC"
                     /locus_tag="JNZ89_002357"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311384.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HAY8936215.1"
                     /translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT
                     LRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVAN
                     GKARIGRPPEQVLEIVG"
     gene            complement(10902..11648)
                     /gene="hda"
                     /locus_tag="JNZ89_002358"
     CDS             complement(10902..11648)
                     /gene="hda"
                     /locus_tag="JNZ89_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA inactivator Hda"
                     /protein_id="HAY8936216.1"
                     /translation="MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSS
                     LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVP
                     EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNL
                     GLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRT
                     LFMTLDQLDRASITAQRKLTIPFVKEILKL"
     gene            complement(11698..12987)
                     /gene="uraA"
                     /locus_tag="JNZ89_002359"
     CDS             complement(11698..12987)
                     /gene="uraA"
                     /locus_tag="JNZ89_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HAY8936217.1"
                     /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
                     TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
                     LVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTII
                     ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL
                     YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI
                     SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM
                     GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM
                     ALATIVGIGLSLIFKLISVLRPEEVVLDAEEADITDK"
     gene            complement(13073..13699)
                     /gene="upp"
                     /locus_tag="JNZ89_002360"
     CDS             complement(13073..13699)
                     /gene="upp"
                     /locus_tag="JNZ89_002360"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HAY8936218.1"
                     /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
     gene            14023..15060
                     /gene="purM"
                     /locus_tag="JNZ89_002361"
     CDS             14023..15060
                     /gene="purM"
                     /locus_tag="JNZ89_002361"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HAY8936219.1"
                     /translation="MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGG
                     FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEP
                     LFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFC
                     VGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPL
                     ADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQW
                     PEVFNWLQTAGNVERHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIK
                     ASDSEQRVVIE"
     gene            15060..15698
                     /gene="purN"
                     /locus_tag="JNZ89_002362"
     CDS             15060..15698
                     /gene="purN"
                     /locus_tag="JNZ89_002362"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HAY8936220.1"
                     /translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE
                     RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG
                     RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
                     TEDDVTARVQTQEHAIYPLVISWFADGRLKIHENAAWLDGQRLPPQGYAADE"
     gene            15870..17936
                     /gene="ppk1"
                     /locus_tag="JNZ89_002363"
     CDS             15870..17936
                     /gene="ppk1"
                     /locus_tag="JNZ89_002363"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HAY8936221.1"
                     /translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN
                     NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
                     ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE
                     IIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD
                     ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL
                     REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD
                     AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
                     GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV
                     RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
                     NSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM
                     CSLIPNPEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV
                     ATPLLDPHLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK
                     SLEQPE"
     gene            17941..19482
                     /gene="ppx"
                     /locus_tag="JNZ89_002364"
     CDS             17941..19482
                     /gene="ppx"
                     /locus_tag="JNZ89_002364"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HAY8936222.1"
                     /translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
                     VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL
                     KRVEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI
                     LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG
                     TIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLA
                     ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR
                     RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNS
                     DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ
                     ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST
                     PEIAA"
BASE COUNT         4716 a         5108 c         5106 g         4614 t
ORIGIN      
        1 tacgttacca atacaggctt aatggctaca tacggcggtc agtttacgct tacgtttctt
       61 ccatctgttt ttgttcacca tgctgctggt tgttaccagc aataacctga ttgtgatgtg
      121 ggcggcgatc gaagccacca ccttaagctc ggcgtttctg gtaggcattt acggtcagcg
      181 ttcatcgctg gaatcagcat ggaagtacat cattatttgt actgttgatg tcgcttttgg
      241 tctgttcggt accgtgctgg tatacgccaa cgccgccagc gttatgccgc aggcagaaat
      301 ggcgatattc tggagcgagg ttcttaagca atcgtccttg cttgacccaa cattaatgct
      361 gttggccttt gtgtttgtgc taattggctt tggtaccaaa accgggctat ttcccatgca
      421 cgcctggctg ccggatgctc acagtgaagc gccgagtccg gtcagcgccc tgctctccgc
      481 cgtattgctg aactgcgcgc tgttggtgct gattcgctat tacatcatta tttgccaagc
      541 catcggcagc gatttcccca accggttgtt gctcatcttc ggcatgttgt cggttgccgt
      601 ggcggcattt ttcattctgg tacagcggga cattaagcgt ctgctggcgt actccagcgt
      661 ggagaacatg gggctggtcg cggtggcgct aggcattggc gggccgctgg gaatttttgc
      721 cgcgctgctg cacaccttaa accacagtct ggcaaaaacg ctgctgttct gcggttccgg
      781 caatgtactg ctcaagtacg gcacgcgcga tctcaacgtc gtctgtggga tgctcaaaat
      841 catgccattt accgccgtgc tgtttggcgg cggtgcgctg gcgctggcag ggatgccgcc
      901 cttcaacatt tttcttagcg aatttatgac cgttaccgca ggactggcac gtaatcacct
      961 gctgattatc gtcctgctgt tattgctgtt aacgctggtg ctggcgggcc tagtacggat
     1021 ggctgcgcgg gtgttaatgg cgaaaccgcc gcaggccgtt aaccggggtg atctcggctg
     1081 gttgaccacc tcgccaatgg tgattctgct ggtcatgatg ctggcgatgg gaacgcatat
     1141 tccacaacct gtcatcagga tcctggcggg cgcttccact atagtcctct cagggacgca
     1201 cgacctgcct gcacaacgta gcacctggca tgattttttg ccttcaggca ccgcatctgt
     1261 ttcggagaaa cacagtgaac gttaattcat cgtcaaatag tggcgaagcg attctcgccg
     1321 ccctgaaaac gcagttcccc ggcgcggtac tggatgaaga gcgacaaacg cctgaacagg
     1381 tcaccattac ggtgaaaatc aatctgctgc ctgacgttgt acattatctt tattatcaac
     1441 atgatggctg gcttccagtc ctgtttggca acgacgagcg gacacttaac ggtcattacg
     1501 cggtttatta tgccctttca atggaagggg ccgaaaaatg ctggatcgtg gtgaaggcac
     1561 tggtcgatgc cgacagtcgg gagtttccgt cagtcacacc gcgcgtccct gccgcggtct
     1621 ggggcgagcg agaaattcgc gatatgtacg ggctgattcc ggttggcctg ccggatcagc
     1681 gtcgcctggt gttgcccgat gactggccgg aagatatgca tccgctgcac aaagatgcga
     1741 tggattatcg actgcgccct gaaccgacga cagattccga aacgtatgcg tttatcaatg
     1801 agggcaacag cgatgcgcgg gtgatccctg tcggcccgct gcatatcacc tccgatgaac
     1861 cgggtcactt ccgcttgttt gtggatggcg agcaaattgt cgatgctgat taccgcctgt
     1921 tttatgtcca tcgaggcatg gagaaactgg cagaaacgcg gatgggctac aacgaagtga
     1981 ccttcttatc ggaccgcgtg tgtgggattt gcggttttgc ccacagtgtg gcctatacca
     2041 actcggttga aaatgcactg gggattgagg tgccgcaacg agcgcatacc attcgctcga
     2101 ttctgctgga agtcgaacgg ctacacagtc atttgctcaa ccttggcctc tcctgccatt
     2161 ttgttggttt tgataccggc tttatgcaat ttttccgcgt gcgggaaaag tcgatgacga
     2221 tggcggaatt gctgaccggg tcgcgtaaaa cctacggtct gaatctgatt ggtggtgttc
     2281 gccgcgatat tctcaaagag caacgtctgc aaacgctgaa actggtgcgc gagatgcgcg
     2341 ccgacgtgtc ggagctggta gagatgctgc ttgctacgcc gaatatggaa caacgcactc
     2401 agggcattgg cattctcgac cgacaaatcg cccgtgatta tagccctgta gggccgctga
     2461 tccgcggcag tggttttgcc cgtgatttgc gctttgatca cccctacgcc gactacggca
     2521 atattccaaa aacactgttt accttcaccg gcggcgatgt tttctcccgc gtgatggtcc
     2581 gtgtcaaaga gacgtttgat tcgctggcaa tgctggaatt tgccctcgac aacatgccgg
     2641 ataccccact gctgaccgaa ggctttagct ataaacctca cgcattcgcg ctgggctttg
     2701 ttgaagcgcc acgcggtgaa gacgtgcact ggagcatgct cggtgataac caaaaattgt
     2761 tccgctggcg ctgccgtgcc gccacctacg ccaactggcc ggtgttgcgt tacatgctgc
     2821 gcggcaatac cgtttctgac gcaccgctga ttatcggtag ccttgatccc tgctactcct
     2881 gtaccgaccg tgtgacgctg gtagatgtgc gcaagcgcca gtcaaaaacc gtgccgtata
     2941 aagagatcga acgctacggc attgatcgta accgttcgcc gctgaagtaa ggacagaaga
     3001 tgctgaagtt actgaaaact attatgcgcg ccggaaccgc gacggtgaaa tatcccttcg
     3061 cgccactgga ggtcagccca ggctttcgcg ggaaaccgga cctgatgccc agccaatgta
     3121 ttgcctgcgg cgcctgtgct tgtccggcaa atgcgctgac tatccagacc gacgaccagc
     3181 aaaattcgcg cacctggcag ctctatctgg ggcgttgtat ttactgcgga cgttgtgaag
     3241 aagtgtgccc gaccagagcc atccagctta ccaataactt tgaactgacc gtcaccaata
     3301 aagccgatct ctatacccgc gcgacgttcc atctacaacg ttgcagccgt tgcgaacgcc
     3361 cgtttgcccc gcaaaaaacc gtcgcactgg ctgctgaatt gttggcacag caacaaaatg
     3421 cgccacaaaa ccgcgaaatg ttgcgggcgc aagcgagcgt ctgcccggag tgcaaacaac
     3481 gcgcgacgct gatcaacgac gatacagatg taccgctggt ggctaaggag cagctatgag
     3541 tccagtgctt acacaacatg tcagccagcc catcacgctg gatgagcaaa cgcaaaagat
     3601 gaagcggcat ttgctacagg atatccgtcg ctcagcctac gtttatcgcg tcgattgcgg
     3661 cggctgcaac gcctgtgaaa tcgaaatttt tgctgccatc acccccgtat tcgacgcaga
     3721 acgttttggc attaaggttg tttcatcacc gcgtcacgcc gatattttgt tatttactgg
     3781 cgcagtcacc cgggcgatgc gtatgcctgc acttcgggcg tatgagtctg cccccgatca
     3841 taaaatctgt gtttcctacg gcgcgtgcgg tgtcggcggc ggtattttcc acgatctcta
     3901 cagcgtctgg ggcggcagcg acaccattgt ccccattgat gtttggatcc ccggctgccc
     3961 gccaacaccg gccgccacca ttcacggttt cgccgtggcg ctcggtttgc tgcaacagaa
     4021 gattcacgct gtggattatc gcgatcccac cggggtgact atgcaaccgt tgtggccaca
     4081 gatcccgcca tcacagcgta tcgccattga gcgagaagcg cggcggctgg cgggctatcg
     4141 tcaggggcga gaaatttgcg atcggctcct gcgccattta agcgacgatc ctaccggaaa
     4201 tcgggttaac acctggttgc gcgatgccga cgatccacgt ctcaatagta tcgttcagca
     4261 actctttcgc gtactccggg ggttacatga ctgaagagtg cggggaaatt gttttctgga
     4321 cgctgcgaaa aaagtttgtc gccagtagcg acgagatgcc ggaacaccgc tctcaggtaa
     4381 tgtattactc gctggctatc ggccatcacg ttggcgtgat tgattgtctg aatgtcgcct
     4441 tccgctgccc actgacggaa aacgaagatt ggcttgcaca ggtcgaagag gagcaagccc
     4501 gacgtaagat gctgggggtg atgacctttg gtgagattgt tattgacgcc agccacaccg
     4561 ccctgttgac ccgggcattc gcgctactgg cagatgacgc gacgtctgtg tggcaggcgc
     4621 gtagcattca attcattcat ctgttggatg aaattgtgca ggaaccggcc atctatctga
     4681 tggccagaaa aattgcgtga gaaggatttc tcattaataa ggactgttga tggctatgtc
     4741 agacgaggcg atgtttgccc cgccacaagg aataacaatt gaagcggtaa acggaatgct
     4801 cgcggagcgg ttagcacaga aacacggtaa ggcgtcttta ttacgcgcct tcatcccgat
     4861 gccgccgccg ttcagcccgg tacaacttat tgaactgcat gttatcaaaa gcaacttcta
     4921 ttaccgctac catgatgatg gcagcgatgt gacggcaaca acagagtatc agggcgagat
     4981 ggtcgattat tcgcgtcacg ccgtccttct cggcagtagt ggaatggcgg agctacgctt
     5041 tattcgtacc cacggcagcc gttttactcc ctaggattgc acactgttta actggctggc
     5101 acgcattatc actccggttc tgcaatcatg gctcaatgat gaagaacaac aggtggcgct
     5161 gcgtttgctg gagaaagatc gcgatcatca tcgggtactg gttgatatta ctaatgcagt
     5221 gctgtcacat cttgatctcg acgatctgat cgctgacgtc gctcgtgaga tccatcattt
     5281 tttcggtctg gcttcagtca gtatggtact gggcgatcat cgaaagaacg agaagtttag
     5341 cctgtggtgc agcgatcttt ctgcctcaca ttgtgcgtgt ctgccacgca atatgcctgg
     5401 cgacagtgta ttgctgacac aaacgctaca aacccgacaa ccgaccttga cgcaccgtgc
     5461 agacgatctg tttctctggc aacgcgaccc gttattactc ttacttgcat ctaacggctg
     5521 cgaatctgcg ctccttatac cgcttacctt tggcaaccat acaccgggtg cattgttgct
     5581 ggcgcatacc tcttccactc tctttagtga ggaaaactgc cagctactac aacacatagc
     5641 cgatcgcatc gctattgccg ttggcaatgc cgatgcctgg cgtagcatga ccgatttgca
     5701 ggaaagtttg cagcaagaaa actaccagct tagcgagcag ctcctttcga atctgggcat
     5761 cggtgacatt atctatcaaa gccaggcaat ggaagacctg ctccagcagg tagatattgt
     5821 agcgaagagc gacagtacgg tgttgatttg tggtgaaacc ggaaccggca aagaggtgat
     5881 cgccagagcg ctccatcaac ttagcacgcg acgcgacaaa ccgctggtca aaatcaactg
     5941 cgctgccatc cccgccagtc ttctggaaag tgagttattc ggtcatgaca aaggggcgtt
     6001 tactggtgcg attaatacac atcgtggtcg ttttgaaatt gccgatggcg gcacgttgtt
     6061 tctcgatgaa attggcgatc tgccgttaga acttcagcct aaactgctgc gcgtattgca
     6121 ggaacgggag attgagcgtc tcggcgggag tagaacgatc ccggtgaatg tcagagtcat
     6181 tgccgccacc aaccgtgatt tgtggcaaat ggttgaagat cgccagtttc gcagcaatct
     6241 cttttatcgc ctgaatgtct tcccattgga attgccgccg ctacgcgacc gtccggaaga
     6301 tatccctctt ttagcaaaac atttcacgca aaaaatggcg cgccatatga atcgcgcaat
     6361 tgacgccatc ccgaccgagg cgctacgcca gttgatgtcg tgggactggc cgggcaacgt
     6421 gcacgagctg gaaaacgtga ttgagcgagc ggtactgctg actcgcggta acagtctgaa
     6481 tttacatctt aatgtccgac aaagccgttt actgccgacg ctaaatgaag attcagcgct
     6541 tcgcagttca atggcgcagt tgctgcaccc gacgacgcca gagaatgacg aagaagaacg
     6601 tcagcgcatt gttcaggtat tgcgagaaac caatggcatt gttgccgggc cccgtggcgc
     6661 ggcgacacga ttagggatga agcgcaccac gctgctgtca cgaatgcagc gtctggggat
     6721 ctcggttcgc gaggtgttgt aatctgcttt tgcaggagta tgcatgagaa acaaactctc
     6781 tttcgacttg cagttgagcg ccagaaaagc ggcaatcgct gaacggattg ccgtccataa
     6841 aattgcccgc agtaaagtgt cggtcttttt aatggcgatg tccgctggcg tgtttatggc
     6901 gatcggattt actttttacc tttccgttat cgccgatgcc ccgtcttcac aggcattaac
     6961 ccatctggtg ggcggccttt gctttacact cggctttatt ttgctggcgg tttgcggcac
     7021 agcctgttca cctcgtcggt aatgacggtg atagcaaaaa gtcggggcgt tattagttgg
     7081 cgaacttggc tgattaacgc acttctggtg gcctgtggta atctggcagg tattgcctgt
     7141 ttcagtttgt taatctggtt ttccgggctg gtgatgagtg aaaacgcgat gtggggagtc
     7201 gcggttttac actgcgccga gggcaaaatg catcatacat ttactgaatc tgtcagcctc
     7261 ggcattatgt gcaatctgat ggtttgcctg gcgctgtgga tgagttattg cgggcgttcg
     7321 ttatgcgaca aaatcgtcgc catgattttg cccatcaccc tgtttgtcgc cagtggcttt
     7381 gagcactgta tcgccaattt gtttgtgatt ccgttcgcca ttgccattcg ccatttcgcc
     7441 cccccccttc tggcaactgg cgcacagtag cgcagacaat tttccggcac tgacggtcag
     7501 ccattttatt accgccaatc tgctcccggt gatgctgggt aatattatcg gcggtgcagt
     7561 gctggtgagt atgtgttatc gggctattta tttacgtcag gaatcctgaa aaatcagccc
     7621 ggcgaaacag ttcgtcgggc tgaagattat tcttgcgcga tttgcccatc gggccaggcg
     7681 tggatcacgg ctttgatcag cgtcgccaat ggaatggcga agaatacgcc ccagaatccc
     7741 cacaaaccac cgaagatcac caccgataaa ataatcacca gcggatgcag gttaaccgct
     7801 tcggagaaca acaccggtac tagcaggttg ccgtccagcg cctgaataat cagatacacc
     7861 gcgaagcagc tccagaattc cgtgcctgcg ccaaactgga atagcgccac gccaaccacc
     7921 ggaatggtca ccacaaatgc gccaatgtac ggaataagaa ccgagaagcc gaccagcacc
     7981 gccagcagca gcgaatagtt cagcccaaag agcaagaacc ccagccaggt ggcgatcccc
     8041 accacgatca tctccagcac tttgccgcgg atatagttgg tgatttgttg attcatctcc
     8101 ttccacacct gtcctgccag tccacggttg cgcggcagca cccgacgaac ggcgttcagc
     8161 atctgctctt tgtctttcag caggaagaag accatcaatg gcaccagcac cagatagacg
     8221 gcaatggtca gcaaaccgac cagcgaggcg agggaaattt tcaccaccga atcgcccatg
     8281 gtcagcatcc gactgcgcat attttcggcc attgcatcaa taatgcccgc gtccattaac
     8341 gccggatagc ggcgcggcaa cgtggcggca aagtcagaaa gcttattgag catccccggc
     8401 atatcgcgga ttaagtagat gccctgttgc caggcgatag gcagtaccac gaacgccatc
     8461 agtagcaata taccgacaaa aaccaccaat acaatcgacg tcgcccagcg gcgggagcag
     8521 ccaatagatt gcaggcgcac ggttggccat tccagcaaat aggccagcac aatagccacc
     8581 agcaacggag caagcaggcc actaaagaaa aagataatgc caaatccggc aactaaaata
     8641 accagcaagg caatcgcttc cgggtcgcta aaacggcggc gataccattg catcaacatt
     8701 tcgagcataa aaaccttccc tgaacctcaa gagcgggatt gcgatccgca attgtatcga
     8761 aatgtcacaa aaaagacttc gctttttatg acggattcag gaaactgaaa agtcatttga
     8821 gtgggctaat cttcgccgtt acactcaaag gcggcgcggt gggaacgata tttcacagta
     8881 tcggtcaaat gactatcttc agaaatacag gatagaggtt atgttcaggc agttgaaaaa
     8941 aaacctggtt gcaaccctca ttgctgctat gaccattggt caggtagccc cggcgtttgc
     9001 cgacaacgca gacaccttgc cggatatggg aacctccgca ggaagcacgc tttccattgg
     9061 tcaggaaatg cagatgggcg actattatgt ccgccagcta cgcggcagcg cgccgttaat
     9121 taatgacccg ctgttaacgc aatatattaa ttcgctgggg atgcgtctgg tttcgcatgc
     9181 caattcggtt aagacaccgt ttcatttttt tctaatcaac aacgacgaaa ttaacgcctt
     9241 tgctttcttt ggcggcaacg tggtgctgca ctctgccctg ttccgttatt ccgataacga
     9301 aagtcaactg gcttcagtta tggcgcacga aatctcccac ctcacccaac gtcacctggc
     9361 gcgagcgatg gaagatcagc agcgcagcac gccgctgacc tgggtcggcg cgttaggttc
     9421 tattttactg gcgatggcca gtccgcaggc ggggatggcg gcgctgaccg gtacactggc
     9481 gggaacgcgt caggggatga tcagtttcac ccagcaaaat gaacaggaag cggaccgcat
     9541 tggtattcag gtgctgcaac gctcgggatt cgatccgcag gcgatgccaa ccttcctcga
     9601 aaaattactc gatcaggcgc gttactcctc gcgcccgccg gaaattttat tgactcaccc
     9661 gttgccggaa agtcgtctgg cagatgcccg caaccgtgct aatcagatgc gaccgatggt
     9721 ggtgcagtcg tcggaagatt tctatctggc gaaagcgcgc acactgggga tgtataattc
     9781 cggacgtaac cagctcacca gtgatttgct ggatgaatgg gcgaaaggaa acgttcgtca
     9841 gcaacgagcg gcgcaatatg gtcgtgcttt acaggcgatg gaagccaata aatacgacga
     9901 ggcgcgtaaa acgctgcaac cgttactggc ggcagaacct ggcaacgcat ggtatctcga
     9961 tctggctacc gatatcgatc ttgggcaaaa caaagccaat gaggcaatca atcgcctgaa
    10021 aaatgcccgt gatttgcgca ccaatccggt gttgcagctc aacctggcaa acgcttatct
    10081 gcaaggcggt caaccacaag aagcggccaa tattctcaat cgctacacct ttaataataa
    10141 agatgacagc aacggctggg atttactggc acaggcggaa gccgcgctaa ataaccgcga
    10201 tcaggagctg gctgcgcgag cagaaggtta tgcgctcgcc ggacgactcg atcaggccat
    10261 ttcgctgttg agtagcgcca gttcgcaggt gaaattaggc agcctgcaac aagcgcgtta
    10321 cgatgcgcgc atcgaccagt tgcgccagct gcaggaacgc tttaagcctt ataccaagat
    10381 gtaattcgca ttaaaggaag aacaatgacc aaacaggtaa aaatctacca taacccacgc
    10441 tgttcaaaga gccgggaaac gctgaacctg ctgaaagaaa acggcgtgga gccagaagtg
    10501 gtactctacc ttgagacacc cgccgatgcg gcaacgctgc gcgatttgct gaaaatgctg
    10561 gggatgaata gcgcccgtga attgatgcgc cagaaagagg atctttataa agaactgaac
    10621 ctggctgaca gttcgcttag cgaagaggcg ctgattcagg caatggtgga taatccgaag
    10681 ctgatggagc gcccgattgt ggtcgcgaat ggcaaagcgc ggattggtcg tccaccggag
    10741 caggtactgg aaatcgtggg ttaagatgtg ctccatcgct agttgaagca cattgccgga
    10801 tgcgacgctt gccatgtctt atccggccta cgaatactat ggattaactt cgcgtagttc
    10861 ggataaggcg ttcgcgccgc atccgacaat aaacacctta tctacaactt cagaatttct
    10921 ttcacaaacg gaatggtcag cttacgttgc gcggtaatcg acgcacgatc caactgatcc
    10981 aacgtcataa atagcgtgcg catttctctg tcgagccgct tcagcaagaa acgccccaca
    11041 tcttccggca gttcaaaacc acgcaaacgc gcgcgtaact gtagcgcctg caacttatct
    11101 tcatcagaaa gtggctgcaa tttgtagatc tgcccccagt cgagtcgcga cgcgagatcc
    11161 ggtaatccca gattcaactg ccgcggtgga cgatcgccgg tgatcaacaa ccgtgttttg
    11221 cccgattcca gaattcgatt gtagagatcg aaaatcgcca tctcccacaa ctcatcgcct
    11281 gcaatacact caatgttgtc gatacaaacc agcgacaaat gctccatacc gtcgagcact
    11341 tccggaacaa accaagtgcg tttatccagc gggacatagc ccaccgcatc gccacgctgc
    11401 gacaattccg cgcaagccgc gtgcagcaga tggctgcgcc ccgcgccttc gcgtgcccag
    11461 agatagatgt aaccgctatg ttcctgacgc agcacgtttt gcagcgcggc cagtaaagag
    11521 gagttatccc ccggccagaa acttgcaaag gtttcgtcgt caggaagata aagtggcaaa
    11581 gagagctgtg ccggtgtgtt cagagatacc tcaaccagga tttcacaaaa tcgcgagaag
    11641 tttaccacag aatcccatga tgtttgaacc gggcagcaac actgcccggt cggtacatta
    11701 tttgtctgtt atatccgcct cttctgcgtc cagcaccact tcttcagggc gcagcacact
    11761 gatcagtttg aaaatcaaac ttaagccgat accgacgatg gtcgccagcg ccataccttt
    11821 taactccgcc gcgccgatgt ttaccttcgc gccactgacg ccgatgatca aaatcacgga
    11881 agtcaggatc aggttctgtg ctttgttgta atccactttc gattcgatca aaacacgaat
    11941 accggaagca ccgatgacac cataaagcag cagcgaaacg ccgcccatca ccggcaatgg
    12001 gatcatctgg atagcggcag ccagtttacc gacgcaggaa agcaggatag cgaaaatcgc
    12061 cgccccgccg ataacccagg tactgtaaac acgggtgatc gccatcacgc caatgttttc
    12121 tccgtaagtg gtatttggcg tggagccaaa gaagccggag atcacggtcg acaggccgtt
    12181 agcaaacatc gaacggtgca gacctggatc gcgcagcaga tcttttttga cgatattagc
    12241 cgttactacc aggtgcccta cgtgttcggc aataaccact aacgccgctg gcagaatagt
    12301 cagaatggca aaccactcga agcgcggcgt atagagggtt ggcagcgcaa accagtgagc
    12361 attaataatc ggcgtggtat cgacaattcc cattgcgaaa gagagcgcgt agcccaccag
    12421 cacgccaatt aaaatcggga taattgccag gaaaccacga aacagcacgg aacctaaaac
    12481 cgtgaccgcc agggtggtaa tagagatgat gatggttttg gagtctggcg tttgcccttc
    12541 agccgggagt aaacccgcca taccggcagc tacgcccgcc agctccagac cgatgacggc
    12601 aacgattgcg cccattgccg caggtggaaa cagcacgtcc agccagccgg tccccgcttt
    12661 cttcacgata aaagaaacca ggcagaacag cacgccgcac ataataaagc cgcccagcgc
    12721 gacttcatac cctaacggca acagtaacaa taccggtgaa ataaaggcaa agctggaacc
    12781 aagataagcc ggaattttcc ctttacagat gaagagatac agcagcgttc caataccgtt
    12841 aaataacagt acagtcgccg ggttaatatg aaataagacg ggcaccagga cggttgcacc
    12901 aaacatggcg aacaaatgtt gcaaactaag cgggattgtc tgtaaaagtg gcggtctttc
    12961 actcaccccg atagcacggc gcgtcatagt attatcctct gtattatgtg ttataggcgc
    13021 tttactcaaa aaaaagccga ctcttaaagt cggctttaat tatttttatt ctttatttcg
    13081 taccaaagat tttgtcaccg gcatcgccga ggcccggaat aatgtatccg tgctcgttca
    13141 gtccctgatc aatcgatgcg gtatacagtt cgacgtccgg gtgcgctttt tccagcgcag
    13201 cgataccttc tggcgcagcg accagcacca gaactttgat gctgctgcag cccgcttttt
    13261 tcagcaggtc gatggtcgcg ataacggaac caccggttgc cagcattggg tcaacgatca
    13321 gcgccatacg ctcatcgatg ttagaaacca gtttctggaa gtacggtacc ggctccagcg
    13381 tttcttcatt acggtacata ccgacaacgc tgatgcgcgc gctcggaaca ttttccagca
    13441 caccgtccat cataccaaga cccgcacgca gaattggcac aacggtaatt ttcttacctt
    13501 tgatctggtc gatttctacc gggccgttcc agccttcgat agttactttt tccgtttcga
    13561 ggtcggcggt cgcttcgtaa gtcagcaggc tacccacttc ggaagcgagt tcgcgaaagc
    13621 gcttggtgct gatatcttgc tcacgcatca gtcccagctt gtgtttgacg agtgggtgtt
    13681 tgacttccac gatcttcata ctctttctcc tttgaggggc agccacaaaa aaatcgacgg
    13741 attatacctc ctttcttcaa ggcggcaata ttcttttcgt tgactttagt caaaatgata
    13801 acgatttgag ataaagttat tttatattca aatggttatg aaagaagatc attccatccg
    13861 aaaactaacc tttgccctgg cacaagtctt ctttcgccgc gcgtctgggg aaaagacgtg
    13921 caaaaaggtt gtgcaaagca gcctcgcaaa cgtttgcttt ccctgttaga attgcgccga
    13981 attttatttt tctaccgcaa gtaacgcgtg gggacccaag cagtgaccga taaaacctct
    14041 cttagctaca aagatgccgg tgttgatatt gacgcgggta atgctctggt tggaagaatc
    14101 aaaggcgtag tgaagaaaac gcgtcgtccg gaagtgatgg gcggtctggg cggcttcggt
    14161 gcgctgtgtg cattgccgca aaaatatcgt gaacccgtgc tggtttccgg cactgacggc
    14221 gtaggtacca agctgcgtct ggcaatggac ttaaaacgtc acgacaccat tggtattgat
    14281 ctggtcgcca tgtgcgttaa tgacctggtg gtgcaaggtg cagaaccgct gtttttcctc
    14341 gactattacg caaccggaaa actggatgtt gataccgctt cagcggtgat cagcggcatc
    14401 gcggaaggtt gtctgcaatc gggctgttca ctggtgggtg gcgaaacggc agaaatgccg
    14461 gggatgtatc acggtgaaga ttacgatgtc gcgggtttct gcgtgggcgt ggtagaaaaa
    14521 tcagaaatca tcgacggctc taaagtcagc gacggcgatg ttctgattgc actcggttcc
    14581 agcggtccgc actcgaacgg ctattcgctg gtgcgcaaaa ttcttgaagt cagcggttgt
    14641 gatccgcaaa ccaccgaact tgatggtaag ccattagccg atcatctgct ggcaccgacc
    14701 cgcatttacg tgaagtcagt gctggagttg attgaaaagg tcgatgtgca tgccattgcg
    14761 cacctgaccg gcggcggctt ctgggaaaac attccacgcg tattgccaga taatactcag
    14821 gcagtgattg atgaatcttc ctggcagtgg ccggaagtgt tcaactggct gcaaacggca
    14881 ggtaacgttg agcgccatga aatgtatcgc accttcaact gcggcgtcgg gatgattatt
    14941 gccctgcctg ctccggaagt ggacaaagcc ctcgccctgc tcaatgccaa cggtgaaaac
    15001 gcgtggaaaa tcggtatcat caaagcctct gattccgaac aacgcgtggt tatcgaataa
    15061 tgaatattgt ggtgcttatt tccggtaacg gaagtaattt acaggcaatt attgacgcct
    15121 gtaaaaccaa caaaattaaa ggcaccgtac gggcagtttt cagcaataag gccgacgcgt
    15181 tcggccttga acgcgcccgc caggcgggta ttgcaacgca tacgctcatc gccagcgcgt
    15241 ttgacagtcg tgaagcctat gaccgggagt tgattcatga aatcgacatg tacgcacccg
    15301 atgtggtcgt gctggctggt tttatgcgca ttctcagccc ggcgtttgtc tcccactatg
    15361 ccgggcgttt gctgaacatt cacccttctc tgctgccgaa atatcccgga ttacacaccc
    15421 atcgtcaggc gctggaaaat ggcgatgaag agcacggtac atcggtgcat ttcgtcaccg
    15481 atgaactgga cggtggcccg gttattttac aggcgaaagt cccggtattt gctggtgata
    15541 cggaagatga cgtcaccgcc cgcgtgcaaa cccaggaaca cgctatttat ccactggtga
    15601 ttagctggtt tgccgatggt cgtctgaaaa tacacgaaaa cgccgcgtgg ctggatggtc
    15661 aacgtctgcc gccgcagggc tacgctgccg acgagtaatg cccccgtagt taaagcgcca
    15721 gctctgccgc tggcgttttt caattcacct gtaaatcgca agctccagca gtttttttcc
    15781 cccttttctg gcatagttgg acatctgcca atattgctcg ccataatatc caggcagtgt
    15841 cccgtgaata aaacggagta aaagtggtaa tgggtcagga aaagctatac atcgaaaaag
    15901 agctcagttg gttatcgttc aatgaacgcg tgcttcagga agcggcggac aaatctaacc
    15961 cgctgattga aaggatgcgt ttcctgggga tctattccaa taaccttgat gagttctata
    16021 aagtccgctt cgctgaactg aagcgacgca tcattattag cgaagaacaa ggctccaact
    16081 ctcattcccg ccatttactg ggcaaaattc agtcccgggt gctgaaagcc gatcaggaat
    16141 tcgacggcct ctacaacgag ctattgctgg agatggcgcg caaccagatc ttcctgatta
    16201 atgaacgcca gctctccgtc aatcaacaaa actggcttcg tcattatttt aagcagtatc
    16261 tgcgtcagca cattacgccg attttaatca atcctgacac tgacttagtg cagttcctga
    16321 aggatgatta cacctatctg gcggtggaaa ttatccgtgg agacaccatc cgttacgcgc
    16381 tgctggagat cccatcagat aaagtgccgc gctttgtgaa tttaccgcca gaagcgccgc
    16441 gtcgacgcaa gccgatgatt cttctggata acattctgcg ttactgcctt gatgatattt
    16501 tcaaaggctt ctttgattat gacgcgctga atgcctattc aatgaagatg acccgcgatg
    16561 ccgaatacga tttagtgcat gagatggaag ccagcctgat ggagttgatg tcttccagtc
    16621 tcaagcagcg tttaactgct gagccggtgc gttttgttta tcagcgcgat atgcccaatg
    16681 cgctggttga agtgttacgc gaaaaactga ctatttcccg ctacgactcc atcgtccccg
    16741 gcggtcgtta tcataatttt aaagacttta ttaatttccc caatgtcggc aaagccaatc
    16801 tggtgaacaa accactgccg cgtttacgcc acatttggtt tgataaagcc cagttccgca
    16861 atggttttga tgccattcgc gaacgcgatg tgttgctcta ttatccttat cacacctttg
    16921 agcatgtgct ggaactgctg cgtcaggctt cgttcgaccc gagcgtactg gcgattaaaa
    16981 ttaacattta ccgcgtggcg aaagattcac gcatcatcga ctcgatgatc cacgccgcac
    17041 ataacggtaa gaaagtcact gtggtggttg agttacaggc gcgtttcgac gaagaagcca
    17101 acattcactg ggcgaagcgc ctgaccgaag caggcgtgca cgttatcttc tctgcgccgg
    17161 ggctgaaaat tcacgccaaa ctgttcctga tttcacgtaa agaaaacggt gaagtggtcc
    17221 gttacgcaca catcgggacc gggaacttta acgaaaaaac cgcgcgtctt tatactgact
    17281 attcgttgct gaccgcagat gcgcgtatca ccaacgaagt acggcgggta tttaacttta
    17341 ttgaaaaccc ataccgccca gtgacatttg attatttaat ggtgtcaccg caaaactctc
    17401 gccgtctgtt atatgaaatg gtagaccgcg aaatcgccaa cgcgcagcaa gggctgccca
    17461 gtggtatcac cctgaagcta aataaccttg tcgataaagg cctggttgat cgtctgtatg
    17521 cggcctccag ctccggcgta ccggttaatc tgctggttcg cggaatgtgt tcgctgatcc
    17581 ccaatccgga aggcattagc gacaacattc gtgccatcag tattgttgac cgttaccttg
    17641 aacatgaccg ggtttatatt tttgaaaatg gcggcgataa aaaggtctac ctttcttccg
    17701 ccgactggat gacgcgcaat attgattatc gtattgaagt ggcgacaccg ctgctcgatc
    17761 cgcacctgaa gcagcgggtg ctggacatca tcgacatatt gttcagcgat acggtcaaag
    17821 cacgttatat cgataaagaa ctcagtaatc gctacgttcc ccgcggcaat cgccgcaaag
    17881 tacgggcgca gttggcgatt tacgactaca tcaaatcact cgaacaacct gaataaccct
    17941 atgccaatac acgataaatc ccctcgtccg caggagtttg ctgcggtcga tcttggttca
    18001 aacagttttc acatggtcat agcccgtgtg gtagatggtg ccatgcagat tattggccgc
    18061 ctgaaacagc gagtgcatct ggcggacggc ctggggccag ataatatgtt gagtgaagag
    18121 gcaatgacgc gcggtttgaa ctgtctgtcg ctgtttgccg aacggctaca agggttttct
    18181 cctgccagcg tctgtatagt cggcacccat acgctgcgtc aggcgctgaa cgccactgac
    18241 tttctgaaac gcgtggaaaa ggtcattccc tacccgattg aaattatttc cggtaatgaa
    18301 gaagcccgtc tgatttttat gggcgtggaa catacccaac cggagaaagg tcgcaaactg
    18361 gttattgata ttggcggcgg atctacggaa ctggtgattg gtgaaaattt cgaaccgatt
    18421 ctcgttgaaa gccgccggat gggttgtgtc agctttgccc agctttactt ccctggcggg
    18481 gtcatcaata aagagaattt tcagcgcgct cgtatggcgg cagcacaaaa actggaaact
    18541 ttaacctggc aattccgtat tcagggctgg aacgtggcaa tgggcgcttc cggtaccata
    18601 aaagccgccc atgaagtgtt aatggaaatg ggcgagaaag acgggataat taccccggaa
    18661 cgtctggaaa aactggtaaa agaagtttta cgtcaccgta atttcgcatc gctgagttta
    18721 ccgggtcttt ccgaagagcg gaaaacagtc ttcgttcctg gactggcgat tttatgcggt
    18781 gtgtttgatg ctttagccat ccgtgaactg cgcctttctg acggggcgtt acgcgaaggc
    18841 gtactgtacg aaatggaagg acgtttccgt catcaggatg tgcgtagtcg caccgccagc
    18901 agcctcgcca accagtatca catcgacagc gaacaggccc gacgggtgct ggataccact
    18961 atgcaaatgt acgaacagtg gcgggaacag caaccgaagc tggcgcatcc gcaactggag
    19021 gcgctactgc gatgggccgc catgctgcat gaggtcgggt tgaatatcaa ccacagcggt
    19081 ttgcatcgcc actccgctta tattctgcaa aacagtgact tgccgggttt taatcaggaa
    19141 cagcagctga tgatggcgac actggtgcgc tatcaccgca aagcgattaa actcgacgat
    19201 ctgccgcgct ttaccttgtt taagaagaaa cagttcctgc cactgattca gctattgcgc
    19261 cttggcgtat tactcaacaa tcaacgtcag gcaaccacca caccgccaac attgacactg
    19321 attactgatg acagtcactg gacactgcgt ttcccgcatg actggtttag tcagaatgcg
    19381 ttggtactgc ttgatctgga aaaggagcaa gaatactggg aaggcgtggc tggctggcgg
    19441 ttgaaaattg aagaagaaag tacacctgaa atcgccgctt aatgctttgc gggccgacga
    19501 gaaatgtcgg cccgcattat tcaggcactt tcgcgaatgg gttc
//
LOCUS       DADMIB010000073        19312 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.073, whole genome shotgun sequence.
ACCESSION   DADMIB010000073 DADMIB010000000
VERSION     DADMIB010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19312
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.073"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..731
                     /gene="rihB"
                     /locus_tag="JNZ89_002365"
     CDS             <1..731
                     /gene="rihB"
                     /locus_tag="JNZ89_002365"
                     /EC_number="3.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribosylpyrimidine nucleosidase"
                     /protein_id="HAY8936223.1"
                     /translation="MRKQIVADNIHGETGLDGPVFESLTRQAESTHAVKYIIDTLMAS
                     DGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPEA
                     ARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENY
                     GLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKV
                     GITIDTDWFWGLVEECVRGYIKTH"
     gene            831..2081
                     /locus_tag="JNZ89_002366"
     CDS             831..2081
                     /locus_tag="JNZ89_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HAY8936224.1"
                     /translation="MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGG
                     IMLWLPAGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVL
                     PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDHLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR
                     LLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVA
                     YLNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRAPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
     gene            complement(2137..3225)
                     /locus_tag="JNZ89_002367"
     CDS             complement(2137..3225)
                     /locus_tag="JNZ89_002367"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8936225.1"
                     /translation="MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRK
                     GRIKGKGYILTEQEYCVVVGTINMDIRGIADIRYPQAASHPGTIHCSAGGVGRNIAHN
                     LALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT
                     VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDT
                     VSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNAAVNALHQQGVQQLFVY
                     LPDESVYCSEKDGEQFLLTAPAHTTVDSFGAGDGFMAGLVYSFLEGYSFRDSARFAVA
                     CAAISRASGSLNNPTLSADNALSLVPMV"
     gene            complement(3228..4085)
                     /gene="nfo"
                     /locus_tag="JNZ89_002368"
     CDS             complement(3228..4085)
                     /gene="nfo"
                     /locus_tag="JNZ89_002368"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HAY8936226.1"
                     /translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL
                     TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG
                     LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH
                     LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLN
                     DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK
                     AQQTEKAVA"
     gene            complement(4159..5208)
                     /locus_tag="JNZ89_002369"
     CDS             complement(4159..5208)
                     /locus_tag="JNZ89_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HAY8936227.1"
                     /translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF
                     SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI
                     SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA
                     SKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI
                     SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIIVAI
                     FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI
                     VGGGAINYVIQSVIA"
     gene            5308..6189
                     /locus_tag="JNZ89_002370"
     CDS             5308..6189
                     /locus_tag="JNZ89_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8936228.1"
                     /translation="MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQ
                     LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNY
                     ILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLE
                     DELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMEL
                     GNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLS
                     NALRRFLDYCDPANIPR"
     gene            6394..7863
                     /gene="lysP"
                     /locus_tag="JNZ89_002371"
     CDS             6394..7863
                     /gene="lysP"
                     /locus_tag="JNZ89_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-specific permease"
                     /protein_id="HAY8936229.1"
                     /translation="MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATIS
                     QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
                     WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS
                     LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSF
                     QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV
                     KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
                     IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
                     HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
                     AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK"
     gene            8156..10136
                     /gene="cirA"
                     /locus_tag="JNZ89_002372"
                     /pseudo
     CDS             8156..10136
                     /gene="cirA"
                     /locus_tag="JNZ89_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416660.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor CirA"
     gene            complement(10168..11004)
                     /gene="yeiG"
                     /locus_tag="JNZ89_002373"
     CDS             complement(10168..11004)
                     /gene="yeiG"
                     /locus_tag="JNZ89_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HAY8936230.1"
                     /translation="MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPP
                     VLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGF
                     YLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPG
                     KYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLID
                     QGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYL
                     LK"
     gene            11262..11930
                     /gene="folE"
                     /locus_tag="JNZ89_002374"
     CDS             11262..11930
                     /gene="folE"
                     /locus_tag="JNZ89_002374"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HAY8936231.1"
                     /translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM
                     TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV
                     RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
                     IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV
                     RHHN"
     gene            11947..13104
                     /locus_tag="JNZ89_002375"
     CDS             11947..13104
                     /locus_tag="JNZ89_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 family protein"
                     /protein_id="HAY8936232.1"
                     /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAITP
                     QDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLF
                     WDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRA
                     WTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRS
                     GWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPF
                     QAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTMLFYHLGLFMHFDR
                     LELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGTAISKTSR"
     gene            13246..14286
                     /gene="galS"
                     /locus_tag="JNZ89_002376"
     CDS             13246..14286
                     /gene="galS"
                     /locus_tag="JNZ89_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708050.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalS"
                     /protein_id="HAY8936233.1"
                     /translation="MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELD
                     YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE
                     KERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDN
                     LSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGT
                     PDMPGGEAAMVELLGRNLQLTAIFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIP
                     IARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQN
                     AAAITNSTNQAM"
     gene            14566..15564
                     /gene="mglB"
                     /locus_tag="JNZ89_002377"
     CDS             14566..15564
                     /gene="mglB"
                     /locus_tag="JNZ89_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HAY8936234.1"
                     /translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR
                     KAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
                     ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK
                     DGQIQSVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW
                     LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT
                     VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK"
     gene            15625..17145
                     /gene="mglA"
                     /locus_tag="JNZ89_002378"
     CDS             15625..17145
                     /gene="mglA"
                     /locus_tag="JNZ89_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HAY8936235.1"
                     /translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL
                     MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQ
                     RSVMDNMWLGRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI
                     AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE
                     VTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ
                     PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANE
                     AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDKSRMKSDTQWVIDS
                     MRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA
                     ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
     gene            17161..18171
                     /gene="mglC"
                     /locus_tag="JNZ89_002379"
     CDS             17161..18171
                     /gene="mglC"
                     /locus_tag="JNZ89_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HAY8936236.1"
                     /translation="MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
                     ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT
                     MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
                     ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
                     AAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG
                     VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPCWQYIIKGAIIIFAVALDSLKYAR
                     KK"
     gene            complement(18414..19312)
                     /gene="preA"
                     /locus_tag="JNZ89_002380"
                     /pseudo
     CDS             complement(18414..19312)
                     /gene="preA"
                     /locus_tag="JNZ89_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
BASE COUNT         4600 a         4774 c         5121 g         4817 t
ORIGIN      
        1 ttatgcgtaa acaaatcgtt gccgataata ttcacggtga aaccggactg gatggtccgg
       61 tattcgagtc gctgacccgc caggcagaaa gtacccacgc ggtgaaatac atcattgata
      121 ccctgatggc aagcgatggc gatatcactc tggtgccggt tggtccgctt tcaaatatcg
      181 cggtggcaat gcgtatgcaa cccgcgatcc tgcccaaaat ccgtgaaatt gtgctaatgg
      241 gcggcgctta cggtacaggc aacttcacgc catctgccga gttcaacatc tttgctgatc
      301 cggaagcagc ccgcgtggtg ttcacctccg gcgttccatt agtgatgatg ggcctcgatc
      361 tcaccaacca gactgtttgc accccggacg tgattgcacg gatggaaagg gcaggcggcc
      421 ctgccggaga gctgttcagc gacatcatga acttcactct caaaacgcag ttcgaaaact
      481 acggcctggc tggcggcccg gtgcacgacg ccacctgcat cggttatctg attaaccctg
      541 atggcattaa aacccaggag atgtacgtcg aagtggacgt caacagtggc ccttgctatg
      601 ggcgtaccgt ctgcgacgag ctgggcgttc ttggcaagcc cgctaatacc aaagtcggca
      661 tcactattga taccgactgg ttctggggct tagtcgaaga gtgcgtgcgc ggctacatca
      721 aaacccatta agtgttgata acaagccggg tcagtatcgc aagatccaag cccggctatt
      781 tctgatgggc agaaagccgt cgcccaatat gacatgaaga gataataact atggatgtca
      841 tgagaagtgt tctgggaatg gtggtattgc tgacgattgc gtttttgctg tcagtaaaca
      901 agaagaagat cagcctgcgt accgttggcg cggcgttagt gttacaggtc gtgattggcg
      961 ggattatgct ttggttaccg gcagggcgtt gggtcgctga aaaagtcgct tttggcgtgc
     1021 ataaagtgat ggcgtacagc gacgcgggta gcgcatttat cttcggttcg ctggtcgggc
     1081 cgaaaatgga cacgctgttt gatggcgcag gatttatctt tggtttcagg gtattaccgg
     1141 caattatctt cgtcactgca ctggtgagta ttctctacta catcggtgtg atggggattt
     1201 taattcgcat tctcggcggt atattccaga aagcattaaa tatcagcaag attgagtcat
     1261 tcgtcgcggt caccaccatt ttcctcgggc aaaacgaaat tccggcgatc gtcaaaccct
     1321 ttatcgatca tctgaatcgc aatgaattat ttacagcgat ttgtagtggc atggcctcga
     1381 ttgctggttc gacaatgatt ggttacgccg ccctgggcgt acctgtggaa tatttgctgg
     1441 cggcatcgtt aatggcgatc ccaggcggga tcttgtttgc tcgcctgtta agcccggcta
     1501 cggaatcttc gcaggtttcc tttaataacc tctctttcac cgaaacaccg ccaaaaagca
     1561 ttattgaagc cgctgcgaca ggggcaatga ccgggctgaa aatcgccgcc ggtgtagcga
     1621 cagttgttat ggcatttgtc gccatcattg cgttaattaa tggtattatc ggcggcgttg
     1681 gcggctggtt tggttttgca catgcctcgc tggagtccat tttaggttac ctgttggccc
     1741 cattggcgtg ggtgatgggg gttgactgga gtgatgcaaa tcttgccggg agtttgattg
     1801 ggcagaagct ggcgatcaat gaatttgtcg cttatctcaa tttctcgcca tatctgcaaa
     1861 cgggtggcac tctggatgct aaaaccgtgg cgattatttc tttcgcgttg tgcggtttcg
     1921 ctaactttgg ttctatcggg gtggtggtgg gggcgttttc tgcggttgcg ccacaccgtg
     1981 cgccggaaat cgcccaactt ggtttacgcg cgctggcggc ggcgacactt tctaacctga
     2041 tgagtgctac tattgcagga ttctttattg gtttagcgta gtgcgcaatt tatgagccgg
     2101 ataagatgcg gtcaagcgtc gaatccggca acattgttac accattggca ctaatgaaag
     2161 cgcgttatcg gcagacaggg tagggttgtt taagctgccg ctggcgcgcg aaattgccgc
     2221 gcaggctacc gcaaaacggg cgctgtcgcg gaaactgtat ccttcaagaa agctatatac
     2281 caggcccgcc ataaaaccat cgccagcacc aaaactgtct actgtcgtat gcgctggcgc
     2341 ggtcagcaaa aattgttctc catccttttc gctgcaataa actgactcat cgggcaaata
     2401 aacaaacagt tgctgaacac cttgctgatg caatgcattc actgcggcat tacggtcagc
     2461 atcgctggtg atcgcctgtc cccataaaat ttccagctcc ggtaaagtgg gtttcagggt
     2521 gtgaatatgc gccagccagt gtttgatttt gcccgctttg aattctgaaa cggtatcgac
     2581 aaacaccggg atttcatcag cgagggtaaa gacccattcc agcgcctcgg ctgtcaggtt
     2641 gcaatcagcc agtaccacgc ccgcatgacg aagtaaatcg cgcgacccgt tcagtagttg
     2701 cggtgtcaac tgttccagca gatgggtatc gttaatcgcc agcacggttt gatcgtctcg
     2761 attggcaatt gccagatacg tcgatgtgct ttgaccatgc aaacgaacgc agccggagac
     2821 attcacgccg gcacggcgcg tttcttccag gagcatttcg ccataaaagt catcgccaat
     2881 cactgaaagc aaatggacgt cacggcctaa cagcgccaga ttgtgggcga tgttgcgtcc
     2941 cacgccgccc gccgagcaat gaattgtacc gggatgagaa gccgcttgcg ggtaacggat
     3001 atccgcgatc ccgcgaatat ccatattgat tgtccccacc actacgcagt attcctgctc
     3061 ggtgagaatg taacctttgc ctttaatccg ccctttgcgc attaaatcca taatatgcgc
     3121 cgcaacgcgc gaacgactga tttgcagcat gtccgcaatt tcgttctgct gaatcagcgg
     3181 gttacgccgt aaaattgcaa ggatctcctt ttcccggtta ttcatcttca ggctaccgct
     3241 ttttcagttt gttgcgcttt cagccaggcg atctcttctg cccagatatc cgggttgatg
     3301 gtttcaagga tcagcggaat gccgtcgaaa cggtcgtcct gcatgatcca gcggaacgca
     3361 tcatgaccga tattgccttc accgaggcta tgatggcggt caacgcggct gccaaaggtg
     3421 cttttcgcat cgttaaggtg catcccgcgc agatacttaa agccaacaat acgggcaaaa
     3481 tccgcgaacg ttttctcgca ttcggctgga gtacgcaaat catacccggc agcgaaagca
     3541 tggcaggtat caatgcagac gccgacacgg gatttatctt ccacgccgtc gataatcgcc
     3601 gcgagatgtt cgaatttaaa ccctaagtta ctgccctgac cggcggtgtt ttcaatcacc
     3661 gctgttacac cttgagtttt atccagcgca atgttgatgg attcggcaat acgcgcaagg
     3721 caatcctctt ctgaaatctg catcagatgg ctgccagggt ggaagttgag caaagaaagc
     3781 cccagttgtt cgcaacgctg catttcatct ataaaggcat cgcgcgattt ttccagagct
     3841 tcagtgaccg gatgtccgag gttaatcaga tagctgtcgt ggggaagaat ttgcgccgat
     3901 gtgtagtgat atttttcaca ggctgctttg aattcatcga tggtttgcgt cgtgagcggt
     3961 gcggcacgcc actgacgttg gtttttggtg aacaaggcaa acgcggttgc gtcgatttcg
     4021 gcggcgcgaa ttgcggcatt tgccagaccg ccagcagcac taacgtgcgc tccaatgtat
     4081 ttcatgcgag gactcctgtt aaacccgctg gaggaaaacg gtaatgatag cgggttaaca
     4141 ggagcaagat gtagtggttt atgcgatgac gctttgaatc acatagttaa tcgcaccacc
     4201 accaacaatc agccaggcaa acagtaccag tgccatcagc agaggtttcg ccccggcttt
     4261 tttcagcgcg ctgacgtgag tggtcagacc cagcgccgcc atcgccattg ccagcaggaa
     4321 ggtatccagc gttaccagca tgttcaccac gctctgcggt aacaggtgga acgagttaaa
     4381 gatggcaacg atgatgaaca agatggcaaa ccacggaata gtgattttgc ttttctcgcc
     4441 gctgttcgcc ccagacagct gtttaacacg cgccgccagc aggatgagga acggagccag
     4501 catcatcacg cgcagcattt tggaaataac tgctgcgttt tccgcatccg ggctgatggc
     4561 atgacctgcc gccaccacct gcgccacttc gtgcacagta gaaccaatgt agataccgaa
     4621 agtttccgga ctaaaccatt gagacatcag cggatatatc gccgggtaga ggaaaatcgc
     4681 gacggtcccg aagataacaa cggttgcaac agccacggtt actttactgg cttccgcttt
     4741 cactaccggc tcagtcgcca gtaccgcggc agcaccacag atactgctac cggcaccgat
     4801 caaccagctg gtgtgcttat ccagaccaaa cactttctgc cccaggaagc aagccagcag
     4861 gaaggtactg gacagcgtca acacgtcaat gatgatccca ctgataccga catcggcaat
     4921 ttgcgagaac gtcagacgga agccataaag aatgataccc agacgtaata aatattgctt
     4981 ggcaaacagc acaccaccgt cacagctttt ccagatgtgc ggatagatgg tgttgcctaa
     5041 aaccatcccc aacaagattg cgagggtgag ggcactaaac ccggcacccg caaccgcggg
     5101 aatggaacca ccccacaggg cgaccccggt gataactgca ctcagggcta accccggaat
     5161 aaaatgccac agtgtacgat gttgtttctg taaggtgata ttcgtcataa ccctctcctt
     5221 ataaccgggc ataaggttac gactaactgg tttaaaaata aaattgatta tatatttata
     5281 attaatcttt ataagtggta agcgactatg cacatcaccc tccggcagtt ggaagttttt
     5341 gcagaagtat tgaaaagtgg atcaaccacc caggcgtcgg tgatgctggc gttgtcgcaa
     5401 tcagcagtga gcgcagcctt gaccgacctg gaagggcagc ttggcgtgca actgtttgat
     5461 cgcgtgggga aaagactggt tgttaatgaa cacgggcggc tgctctatcc gcgtgcgttg
     5521 gcattgcttg aacaggcggt tgaaatcgaa caactgtttc gcgaagacaa cggcgcgatt
     5581 cgtatctatg ccagtagtac catcggtaac tacattctgc ctgcagttat cgcccgttat
     5641 cgccatgatt atccgcagtt gccgattgaa cttagcgttg ggaacagcca ggacgtgatg
     5701 caagcggtgc tggatttccg cgttgatatt ggctttattg aaggaccgtg ccacagcact
     5761 gaaatcattt ctgaaccgtg gctggaagac gagctggtgg ttttcgccgc gccgacttcg
     5821 ccgttggctc gtggtccggt caccttagaa cagctggccg ctgcgccgtg gatcctgcgt
     5881 gaacgcggtt ccggcacgcg ggagattgtc gattatctat tgctgtcaca tttaccgaag
     5941 tttgagatgg cgatggaatt aggtaactcc gaggcaatca aacatgcggt gcgtcatggg
     6001 ttgggaatta gttgcctgtc gcgacgggtg attgaagatc aattgcaggc aggcacatta
     6061 agtgaagttg cggtccctct gccgcgcctg atgcgtacgt tgtggcgtat acatcatcgg
     6121 caaaaacacc tttccaacgc gctacggcgc tttctggact attgcgatcc cgcgaatata
     6181 ccgcgttaag ttgctgtaca agaacatgct ggtgctgtgt cgatttcgtg acgcagcgcc
     6241 ctcagcatgc attcgccaga aaagagattg gctgctttac ttataatccc agggcgatca
     6301 tgaaggtgtc ttataaccgt gtatttctgc cggaaggatt gccaatcgtc tgctacaatc
     6361 gcgcctcatt tttaagatgg atagcatttt tgtatggttt ccgaaactaa aaccacagaa
     6421 gcgccgggct tacgccgtga attaaaggcg cgtcacctga cgatgattgc cattggcggt
     6481 tccatcggta caggtctttt tgttgcctct ggcgcaacga tttctcaggc aggtccgggc
     6541 ggggcattgc tctcgtatat gctgattggc ctgatggttt acttcctgat gaccagtctc
     6601 ggtgaactgg ctgcatatat gccggtttcc ggttcgtttg ccacttacgg tcagaactat
     6661 gttgaagaag gctttggctt cgcgctgggc tggaactact ggtacaactg ggcggtgact
     6721 atcgccgttg acctggttgc agctcagctg gtcatgagct ggtggttccc ggatacaccg
     6781 ggctggatct ggagtgcgtt gttcctcggc gttatcttcc tgctgaacta catctcagtt
     6841 cgtggctttg gtgaagcgga atactggttc tcactgatca aagtcacgac agttattgtc
     6901 tttatcatcg ttggcgtgct gatgattatc ggtatcttca aaggcgcgca gcctgcgggc
     6961 tggagcaact ggacaatcgg cgaagcgccg tttgctggtg gttttgcggc gatgatcggc
     7021 gtagctatga ttgtcggctt ctctttccag ggaaccgagc tgatcggtat tgctgcaggc
     7081 gagtccgaag atccggcgaa aaacattcca cgcgcggtac gtcaggtgtt ctggcgaatc
     7141 ctgttgttct atgtgttcgc gatcctgatt atcagcctga ttattccgta caccgatccg
     7201 agcctgctgc gtaacgatgt taaagacatc agcgttagtc cgttcaccct ggtgttccag
     7261 cacgcgggtc tgctctctgc ggcggcggtg atgaacgcag ttattctgac ggcggtgctg
     7321 tcagccggta actccggtat gtatgcgtct actcgtatgc tgtacaccct ggcgtgtgac
     7381 ggtaaagcgc cgcgcatttt cgctaaactg tcgcgtggtg gcgtgccgcg taatgcgctg
     7441 tatgcgacga cggtgattgc cggtctgtgc ttcctgacct ccatgtttgg caaccagacg
     7501 gtatacctgt ggctgctgaa cacctccggg atgacgggtt ttatcgcctg gctggggatt
     7561 gccattagcc actatcgctt ccgtcgcggt tacgtattgc agggacacga cattaacgat
     7621 ctgccgtacc gttcaggttt cttcccactg gggccgatct tcgcattcat tctgtgtctg
     7681 attatcactt tgggccagaa ctacgaagcg ttcctgaaag ataccattga ctggggcggc
     7741 gtagcggcaa cgtatattgg tatcccgctg ttcctgatta tttggttcgg ctacaagctg
     7801 attaaaggaa ctcacttcgt acgctacagc gaaatgaagt tcccgcagaa cgataagaaa
     7861 taagtttcct cccttccttg ctaagccctc tcaaccgaga gggctttttc aattccattt
     7921 ccctgacaaa tcatgcggat ataaaattta acatttggat tgataattgt tatcgtttgc
     7981 attatcgtta cgccgcaatc aaaaaaggct gacaaatcag aggctgttcc ggctttctgg
     8041 gatgatcacc tgcatacaaa taagtccacc gcgatgctgc cgtacgcaag gggacgtgaa
     8101 gaaggtgtga gcgataaccc attttatttt cgtagttacc tcattgagat atggaatgtt
     8161 taggttgaac cctttcgtac gggtcaggct gtgtttgtcc gctatttctt gtgcatggcc
     8221 tgtgttagcg gtcgatgatg atggcgaaac gatggttgtc actgcatctt ccgttgaaca
     8281 aaacctcaaa gatgcacccg ccagtatcag cgtcattacc caggaagacc tgcagcgaaa
     8341 accggtacag aatctgaagg atgtcctcaa agaagtgcct ggcgtacaac tgacgaacga
     8401 aggggataac cgtaagggcg ttagtattcg tggtctggac agcagctaca ccctgattct
     8461 cgtcgacggt aaacgcgtta actcccgcaa tgccgtcttc cgccacaatg atttcgatct
     8521 gaactggatc ccggtcgatt ccatcgaacg tattgaagtg gttcgtggcc cgatgtcgtc
     8581 gctatacggc tccgatgcgc tcggcggtgt agtgaatatc atcaccaaaa aaatcggtca
     8641 gaaatggtcg ggtaccgtta ccgtcgatac caccattcag gaacatcgcg atcgcggtga
     8701 tacctataac ggtcagttct ttaccagtgg accattaatt gatggtgtgc tgggaatgaa
     8761 agcttacggc agcctggcaa aacgtgaaaa ggatgacccg caaaactcaa cgaccaccga
     8821 taccggagaa atgccgcgta ttgaaggatt ctccagccgc gacggcaatg tcgaatttgc
     8881 ctggacaccg aatcaaaatc acgattttac tgccggatac ggtttcgacc gtcaggaact
     8941 cgctggacaa aaaccgcctg gaacgccaga actactccgt cagccataat gggcgttggg
     9001 attacggcac cagcgaactg aaatactacg gtgagaaagt cgagaacaaa aaccctggca
     9061 acagcagccc gataacttcc gaaagcaata cggtcgacgg caaatacacg ttgccgctga
     9121 cggcgattaa tcagtttctc acggttggcg gtgaatggcg tcacgacaaa cttagcgatg
     9181 cggtgaacct gaccggggga accagctcca aaacgtctgc cagccagtac gcgctgtttg
     9241 tggaagatga atggcggatc ttcgagccgc tggcgctgac gaccggcgtg cgtatggacg
     9301 atcacgaaac ctacggtgaa cactggagtc cgcgtgccta cctggtttat aacgccaccg
     9361 acaccgtaac ggtgaaaggg ggctgggcga cggcatttaa agcaccttct ctgttgcaac
     9421 ttagccctga ctggacgagc aattcctgcc gtggcgcatg taagattgtg ggtagcccgg
     9481 atctgaaacc agaaaccagc gaaagttggg agctggggct ttactacatg ggtgaagaag
     9541 gctggctgga agggggggaa tccagcgtta ccgttttccg taacgatgtg aaagatcgta
     9601 tcagcatcag ccgtacgtct gacgtcaacg ctgcaccggg ctaccaaaac tttgttggtt
     9661 ttgagacggg cgctaacgga cggcgtatac cggtatttag ctactacaac gttaacaaag
     9721 ctcgtattca gggcgtggaa accgaactga aaattccgtt caacgatgaa tggaaactgt
     9781 cgatcaacta cacctacaac gatggtcgtg atgtcagcaa cggcgaaaac aaaccgctat
     9841 ccgatctgcc gttccatact gctaacggta cgctggactg gaaaccgctg gcgctggaag
     9901 actggtcatt ctatgtttct ggtcactata ccgggcagaa acgcgccgac agcgcgacgg
     9961 ctaaaacacc gggcggttat accatctgga ataccggcgc ggcctggcag gtgactaaag
    10021 acgtcaaact gcgcgcaggc gtgctgaacc ttggcgacaa ggatctcagt cgtgacgact
    10081 acagctataa cgaagacgga cgtcgttact ttatggcagt ggattatcgc ttctgatgag
    10141 aagatgcccg gcgaaccggg cggactttca cttcagtaaa tactgcgcat ggaagcgcag
    10201 gtgatcctct ataaaagagg cgatgaagta gtaactgtga tcatatcccg gctgaatacg
    10261 cagcgtcatc ggccacgctt tctggcgcgc ggcttctgcc agtaccgcag gttgcaactg
    10321 gtcggcaaga aactgatcat tatcgccctg atcgataagc gtcgggatcg catcctgcgc
    10381 gttactggca tacatcagcg cgcaactgtc ccattccagc catgcatttt tgtcctcacc
    10441 taaatagctg ctaaacgctt tgattcccca cgggacgctg cacggattca caattggcgc
    10501 aaaggccgaa acgctggtgt atttacccgg atttttcagc gccataatca gcgcaccgtg
    10561 accacccatt gagtgaccgc taatggcgca gcggtcgctg acattaaatt gcgactgaac
    10621 cagcgccggt aattcatcgc gcagataatc atacatccgg taatgcgtcg cccacggcgg
    10681 ttgcgtggca ttaagataaa agcctgcgcc ctggcctaaa tcgtagccat cgtcgttggc
    10741 aaccttttcg ccgcgcgggc tggtgtctgg catcaccagt acaatcccca gttctgccgc
    10801 cacgcgctgg gcacccgcct tggtggtgaa gttctcgtca ttgcaggtta atccggaaag
    10861 ccagtacagc actggtggcg gggtgtgatc acgagggggt gggagaaaga tactgaacgt
    10921 catcgggcag tttaaggtac tggagtcgtg tcgccagcgt tgctgccagc cttcaaaaca
    10981 gcggtgctct tcgagcattt ccatgcgtgg ctccttgttg tgttgtttgc aatttcttca
    11041 tcataccgtt tattcaatgt gctgtgagta actttcactt ccgtatttgc ataacgatgt
    11101 tttaacatct gctgatgaaa ggcagcggca attacaataa ttatcgctgt gaatactgga
    11161 ttatgtgcgc cgcctcacgc acaataatca ggctgtaaat cagcttaata actttgcccc
    11221 cacgcagggc ggaggcgtca cacctgcagg agaaatcata aatgccatca ctcagtaaag
    11281 aagcggccct ggttcatgaa gcgttagttg cgcgaggact ggaaacaccg ctgcgcccgc
    11341 ccgtgcatga aatggataac gaaacgcgca aaagccttat tgctggtcat atgaccgaaa
    11401 tcatgcagct gctgaatctc gacctggctg atgacagttt gatggaaacg ccgcatcgca
    11461 tcgctaaaat gtatgtcgat gaaattttct ccggtctgga ttacgccaac ttcccgaaaa
    11521 tcaccctcat tgaaaacaaa atgaaggtcg atgaaatggt caccgtgcgc gatatcactc
    11581 tgaccagtac ctgtgaacac cattttgtta ccatcgatgg caaagcgacg gtggcttata
    11641 tcccgaaaga ttcggtgatc ggtctgtcaa aaattaaccg tatcgtgcag ttctttgccc
    11701 agcgtccgca ggtgcaggaa cgtctgacgc agcaaattct tattgcgcta caaacgctgc
    11761 tgggcaccaa taacgtggct gtctccattg atgcggtgca ttactgcgtg aaagcgcgtg
    11821 gcatccgcga tgcaaccagt gccacaacaa cgacctctct tggtggattg ttcaaatcca
    11881 gtcagaatac gcgccacgag tttctgcgcg ctgtgcgtca tcacaactga ttaaaaggca
    11941 ggaaccatgg agcgcaacgt aacgctcgat tttgttcgcg gcgtcgccat tctggggatc
    12001 ctgctattaa acatcagcgc ctttgggcta ccaaaggcgg cttatctcaa tcccgcctgg
    12061 tacggcgcta ttacgccgca ggatgcatgg acctgggcat ttctcgatct catcggccag
    12121 gtgaaattcc tcacgctttt tgcgctgctg tttggtgcgg gcctgcaaat gttgctgccc
    12181 cgtggcagac gctggatcca gtcgcggtta acgctgttag tcttgctggg ttttattcac
    12241 ggtttattgt tctgggacgg cgatattctg ctggcttacg ggctggtggg cttaatctgc
    12301 tggcggctgg tgcgcgatgc gccatcggta aaaagcctgt ttaatacagg cgtcatgctt
    12361 tatctggtgg ggcttggcgt tttgctgtta ttggggctga tttccgacag ccagaccagc
    12421 cgcgcctgga cgccggatgc atcggctatt ttgtatgaaa aatactggaa gcttcacggc
    12481 ggcgttgaag cgatcagtaa tcgtgccgat ggtgttggca acagtttact ggcactgggc
    12541 gcacagtatg gctggcaact ggcagggatg atgctcattg gtgcggcgct gatgcgcagc
    12601 ggctggctga aagggcagtt cagcttacgt cactatcgtc gtactggttt tgtgctggtg
    12661 gcgattgggg tgaccattaa ccttcctgcc atcgccctgc aatggcagct ggactgggcg
    12721 tatcgctggt gtgccttctt acttcaaatg ccgcgggaac tgagtgcgcc gtttcaggcg
    12781 attggctatg cgtcgctgtt ttatggcttc tggccgcaat tgagccgctt taagctggtg
    12841 cttgcgatcg cctgcgtcgg acggatggcg ctgaccaact atctattgca aacgctgatt
    12901 tgtaccatgc ttttttacca cctcggtttg tttatgcatt ttgaccgcct ggagctgctg
    12961 gcgtttgtta ttccggtatg gctggcgaat atcctcttct ctgttatctg gctgcgttac
    13021 ttccgccagg ggccggtgga atggctctgg cgtcagttaa ctttgcgtgc tgccggaacg
    13081 gcaatatcta aaacatcaag ataacgatct ggatcacatt cgttaacaaa acggctgtaa
    13141 ccgtttccat tgctgtgact cgattcacga agtcctgtat tcagtgctga caaaatagcc
    13201 gccagcaagc agtcatttac tgcaatctca taacaggtag tgaatatgat caccattcgt
    13261 gatgtagcgc gtcaggctgg cgtctctgtg gcaacggttt cccgggtgct caataacagc
    13321 acgctggtca gtgccgacac gcgtgaagca gtaatgaaag ccgtgagtga gctggattat
    13381 cggccaaacg ccaatgccca ggcgctggca actcaggtta gcgacaccat tggcgtggtg
    13441 gtgatggacg tttctgatgc gtttttcggc gcgctggtaa aagcggtgga tctagtcgct
    13501 cagcagcatc agaaatacgt gctaatcggc aatagctatc atgaagcgga aaaagagcgt
    13561 cacgccattg aggtgttaat tcgccagcgt tgtaatgcgt tgattgttca ctcaaaagca
    13621 ttgagtgacg atgaactggc gcaatttatg gataacattc ccggtatggt gttaatcaac
    13681 cgcgttgtgc cggggtacgc ccatcgttgc gtttgcctgg ataatctcag cggtgcccga
    13741 atggcgacgc gcatgttgct gaataacggt catcaacgta ttggttatct ttcttccagt
    13801 cacggcattg aagatgacgc catgcgtaaa gcaggctgga tgagtgcgtt gaaagagcag
    13861 gatattattc cgccggaaag ctggattggc actggtacgc cggacatgcc gggcggtgag
    13921 gcggcgatgg ttgaactgct ggggcgcaat ctacaactta ccgctatatt tgcttataac
    13981 gacaatatgg ccgctggcgc actgacagca ttaaaagata atggcattgc gattccgtta
    14041 catctctcaa tcatcggttt cgatgatatt cccatcgccc gttacaccga cccgcaatta
    14101 acgaccgtgc gttatcccat tgcttcaatg gctaaattag ccaccgaact ggccttgcag
    14161 ggggcagcag gcaatattga tcctcgtgcc agccactgtt ttatgccgac gttagtgcgt
    14221 cgccattctg tcgcaacgcg ccagaatgcg gcggcgatca ctaactcaac aaatcaggcg
    14281 atgtaaccgc tttcaatctg tgagtgattt cacagaatct taacaatgtg atagctatga
    14341 ttgcaccgtt ttaacgttgt aacccgtatg taacagtgaa taatcacttt caccgaggta
    14401 atagcgtcat aacaacaatt aaagccgttt tctggagcgt taccgggcat ggaagaacga
    14461 attttaaaaa gtgagcttcg gcgttcagta acacttcatt aactctactg ccctgccgag
    14521 catttatctc aagcactacc ctgcataaga aaaaccggag ataccatgaa taagaaggtg
    14581 ttaaccctgt ctgctgtgat ggccagcatg ttattcggtg ccgctgcaca cgctgctgat
    14641 actcgcattg gtgtaacaat ctataagtac gacgataact ttatgtctgt agtgcgcaag
    14701 gctattgagc aagatgcgaa agccgcgcca gatgttcagc tgctgatgaa tgattctcag
    14761 aatgaccagt ccaagcagaa cgatcagatc gacgtattgc tggcgaaagg ggtgaaggca
    14821 ctggcaatca acctggttga cccggcagct gcgggtacgg tgattgagaa agcgcgtggg
    14881 caaaacgtgc cggtggtttt cttcaacaaa gaaccgtctc gtaaggcgct ggatagctac
    14941 gacaaagcct actacgttgg cactgactcc aaagagtccg gcattattca gggcgatttg
    15001 attgctaaac actgggcggc gaatcagggt tgggatctga acaaagacgg tcagattcag
    15061 tccgtactgc tgaaaggtga accgggccat ccggatgcag aagcacgtac cacttacgtg
    15121 attaaagaat tgaacgataa aggcatcaaa actgaacagt tacagttaga taccgcaatg
    15181 tgggacaccg ctcaggcgaa agataagatg gacgcctggc tgtctggccc gaacgccaac
    15241 aaaatcgaag tggttatcgc caacaacgat gcgatggcaa tgggcgcggt agaagcactg
    15301 aaagcacaca acaagtccag cattccggtg tttggcgtcg atgcgctgcc agaagcgctg
    15361 gcgctggtga aatccggtgc actggcgggc acagtactga acgatgctaa caaccaggcg
    15421 aaagcgacct ttgatctggc gaaaaacctg gccgatggca aaggtgcggc tgatggcacc
    15481 aactggaaaa tcgacaacaa agtggtccgc gtaccttatg ttggcgtaga taaagacaac
    15541 ctggctgaat tcagcaagaa ataagactga ttgggcgcag tcgtttactg cgcccttatt
    15601 gtatggccaa caaggtaaaa ttatatggtc agctcaacga ctccgtcttc cggggaatac
    15661 ttgttggaaa tgagcggtat caacaagtcc tttcctggtg ttaaggcact tgataacgtt
    15721 aatttaaaag tccggccaca ttctatccat gcattaatgg gggaaaacgg tgcaggaaaa
    15781 tcgacattat taaaatgcct gtttggtatt tatcaaaaag actccggcac cattttattc
    15841 cagggtaaag agatcgattt ccattccgcc aaagaggcac tggaaaatgg tatttcgatg
    15901 gtacaccagg agttaaacct ggtattacaa cgttcggtga tggataacat gtggctgggg
    15961 cgatatccca ccaaaggcat gtttgtcgat caggacaaaa tgtaccgcga aaccaaagcg
    16021 atttttgatg aactggatat tgatatcgat ccgcgtgcgc gcgtcggcac attatccgtt
    16081 tcgcaaatgc agatgatcga aatcgccaaa gcgttttcct ataacgcgaa aattgtgatt
    16141 atggatgaac cgacttcttc gttaaccgaa aaagaggtca atcatctgtt cactattatt
    16201 cgtaaattaa aagagcgcgg ctgcggtatt gtttatatct cgcataaaat ggaagaaatc
    16261 ttccagttat gtgatgaagt taccgtattg cgcgacggtc agtggatcgc caccgaaccg
    16321 ctggcaggac tgacgatgga caagatcatc gccatgatgg ttgggcgttc tcttaatcag
    16381 cgttttcctg acaaagaaaa caagccgggc gaagtcatcc tcgaggtgcg taacctaacg
    16441 tcactgcgcc agccgtcgat tcgcgatgtc tcgtttgatc tgcataaagg ggagatcctc
    16501 ggtattgccg ggctggtggg ggcgaaacgt accgatattg ttgagacgtt atttggtatt
    16561 cgcgagaaat cggctggcac cattacgttg cacggcaaac agatcaataa ccataatgcc
    16621 aacgaagcca taaaccacgg atttgcactg gtaactgagg agcgccgctc aacgggaatt
    16681 tatgcctatc tggatattgg ttttaactcg ttaatttcca atattcgcaa ctacaaaaat
    16741 aaagttggtt tactggataa atcgcggatg aaaagcgata cccagtgggt gattgattcg
    16801 atgcgggtaa aaacaccggg gcatcggacg caaattggtt cgctctcagg tggtaatcag
    16861 caaaaggtga ttattgggcg ctggctacta acgcaaccag aaatattaat gctcgatgaa
    16921 ccgacgcgcg gtattgatgt cggggcgaag tttgagatct atcagttaat tgccgaactg
    16981 gcgaagaaag gcaaagggat tattattatc tcctctgaaa tgcctgagtt gttagggata
    17041 acagaccgta ttctggtcat gagcaatggt ctcgtttccg gaattgtcga cacaaaaaca
    17101 acaacgcaaa acgaaattct gcgtcttgcg tctttgcacc tttaagatta ggggcttccc
    17161 atgagtgcgt taaataagaa aagttttctt acttacctga aagagggcgg tatttacgtc
    17221 gttcttttag ttttgctggc gattattatt ttccaggacc caacattttt aagtctgttg
    17281 aacttaagta atattctcac ccagtcatcg gtgcgtatta ttatcgcgct cggtgtggca
    17341 gggttaattg tcacccaggg gaccgacctt tctgcggggc gtcaagtagg gctggcagca
    17401 gtggtggcag cgacattatt gcagtccatg gataacgcca ataaagtgtt cccggaaatg
    17461 gcgacgatgc cgattgcgct ggttattctg attgtctgtg ccattggtgc ggtgatcggt
    17521 ttgatcaacg gtctgattat cgcttatctc aacgttacgc cgttcattac cacgctcggc
    17581 acgatgatca tcgtctatgg catcaactcg ctctattacg actttgtcgg ggcgtcgcca
    17641 atttctggtt ttgacagtgg cttctctacc tttgctcagg gctttgtcgc gctggggagt
    17701 ttccgtctct cttacatcac cttctacgcg ttgattgcgg tggcgttcgt ctgggtgttg
    17761 tggaacaaaa cccgcttcgg taagaacatt tttgccattg gcggtaaccc ggaagcggca
    17821 aaagtatctg gtgtcaacgt cggcctgaac ctgctgatga tctacgcgtt gtctggcgtg
    17881 ttctatgcct ttggcgggat gttagaagcc ggacgtatcg gctctgccac caacaacctc
    17941 ggctttatgt atgagctgga tgctatcgcg gcgtgcgtgg taggcggtgt atcgttcagc
    18001 ggcggtgtgg ggacggtgat tggcgtggtg accggggtaa ttatttttac cgtcatcaac
    18061 tatggcctga cgtatatcgg cgtaaaccca tgctggcagt acatcatcaa aggggcgatt
    18121 attatcttcg ccgtagcgct ggattcactg aaatacgcgc gtaagaaatg atgtgaatgt
    18181 ggtccgcatt cggtcataaa cgcacataac atcatgatct gtgtggtttt gtaggccgga
    18241 taaggcgttc acgccgcatc cggcaacagg agccaaatgc cggatgcaac gctggcgcgt
    18301 tttatccggc ctacaataag ctcaacatac tgatttgtat ggttttgtag gccggataag
    18361 gcgttcaagc cgcatccggc gacaggaacc aaatgccgga tgtgacgcgg gttctacaac
    18421 gttaccgggt gttctttctc gcctttctta aacttcactt ccccgagctc aatacaaccc
    18481 accgggcaga cgtgaccaca aagcagacaa cccacacatt tctcggtatt acaatgcggt
    18541 gtgcgggttt tctcgctcca ttccatcgcc tggtgaccgc cgtcgtaaca ggaaatataa
    18601 cagcgtccac agccaacaca tttgtcaaga ttgatacggg gatagacaat ataactgcgg
    18661 tctaaatctt ccgccgggac aatattgtta ttcgccagac ctaccatctc ctgcaacgaa
    18721 tcaaatccct gatcggcgag ataatgcgat aacccgctcg ccatatcttc tacgatgcga
    18781 ttgccgtact gcataatgcc ggtggtgacc tgtaacgttg ctgcgccgag caataaaaac
    18841 tccgccgcat cctcccaggt ttcaatgccg ccgataccgc tgattgggaa atcgcgcagt
    18901 tctggatggg tgcgcatttg ctgaatgaag cgcagggcga tcggttttac cgctttaccg
    18961 gaatatccgg aaatactcga tttaccgtta acgatcggca taccgatttt ctgattaaga
    19021 tcgatattgg tgatggattt aacggtgtta attgccgcaa tgccatctgc gccgccgcgc
    19081 ttcgccgcca gcgccacttc gcacatatca ccgatattcg gcgtcatctt cgccagcatt
    19141 ggcagcgtgg aaccgcgttt caccgcccga caatattttt ctaccagcac cggactttgc
    19201 ccgacatcgc tacccatcgc atgagaagtc atttgcggac aggagaagtt acactcgatc
    19261 atatccgcgc cagctcctcc cattgctgct cattttcccc catgatcgaa gc
//
LOCUS       DADMIB010000074        19150 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.074, whole genome shotgun sequence.
ACCESSION   DADMIB010000074 DADMIB010000000
VERSION     DADMIB010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19150
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.074"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..909)
                     /locus_tag="JNZ89_002381"
     CDS             complement(<1..909)
                     /locus_tag="JNZ89_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY8936237.1"
                     /translation="MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDS
                     LKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAV
                     MQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDV
                     TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYIL
                     LTGDEARFKAFISELTRRMPHHRERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLL
                     RLLLQNGADPEWIQRYTGLSAEQMQAL"
     gene            1376..2608
                     /gene="mdtM"
                     /locus_tag="JNZ89_002382"
     CDS             1376..2608
                     /gene="mdtM"
                     /locus_tag="JNZ89_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtM"
                     /protein_id="HAY8936238.1"
                     /translation="MPRFFARHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFN
                     ADVSLAPAAVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMT
                     QFLIARAIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAAL
                     MHFVHWKVLFAIIAVMGFISFVGLLLAMPETVKRGAVPFSAKSVFRDFRNVFCNRLFL
                     FGAATISLSYIPMMSWVAVSPVILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVK
                     DPTEPRFIWRAVPIQLVGLALLIIGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFT
                     LFSNNLPKGTVSASLNMVILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLA
                     GLLNRVRQHQAAELAEER"
     gene            2649..3929
                     /locus_tag="JNZ89_002383"
     CDS             2649..3929
                     /locus_tag="JNZ89_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HAY8936239.1"
                     /translation="MNKLIELRRAKMLALSLLLIAAATFVVTLFLPPNFWVSGVKAIA
                     EAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSL
                     VALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAI
                     DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEH
                     PLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDP
                     EMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKADINSEDSRVKERIARAGQWFGE
                     TLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKD
                     LQFIRVNGTLVGGCIGLILYLLSQLPALFPLSNF"
     gene            4045..5197
                     /locus_tag="JNZ89_002384"
                     /pseudo
     CDS             4045..5197
                     /locus_tag="JNZ89_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418755.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase subunit D"
     gene            5207..5975
                     /locus_tag="JNZ89_002385"
                     /pseudo
     CDS             5207..5975
                     /locus_tag="JNZ89_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313324.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5972..6229
                     /locus_tag="JNZ89_002386"
     CDS             5972..6229
                     /locus_tag="JNZ89_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3343 domain-containing protein"
                     /protein_id="HAY8936240.1"
                     /translation="MKEFLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLC
                     IWLTCPPGEEIQWVIPGLTESIYCQQDGVWRCIAHYRVSPR"
     gene            6183..7154
                     /locus_tag="JNZ89_002387"
     CDS             6183..7154
                     /locus_tag="JNZ89_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiK family protein"
                     /protein_id="HAY8936241.1"
                     /translation="MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISL
                     SKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTW
                     SAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYA
                     IYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN
                     GLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG
                     EISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPKSSH"
     gene            7222..8394
                     /locus_tag="JNZ89_002388"
     CDS             7222..8394
                     /locus_tag="JNZ89_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8936242.1"
                     /translation="MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAE
                     GAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLRPFLLVSALARGLLILAMAWL
                     PPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIALGNEYVLAGL
                     HFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYG
                     LAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLT
                     ANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGF
                     VTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS"
     gene            complement(8407..9063)
                     /gene="kptA"
                     /locus_tag="JNZ89_002389"
     CDS             complement(8407..9063)
                     /gene="kptA"
                     /locus_tag="JNZ89_002389"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2'-phosphotransferase"
                     /protein_id="HAY8936243.1"
                     /translation="MWKRFCAGLSCRKFINPVTMTLVNKNRKSRDENEMAKHNEKELA
                     DTSKFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQKAGKRLTRALLDTVVATSDKK
                     RFSYSSDGRCIRAVQGHSTSQVAISFAEKTPPQFLYHGTASRFLDEIKKQGLIAGDRH
                     YVHLSADEATARKVGARHGSPVVLTVKAQEMAKRGIPFWQAENGVWLTSTVAVEFLEW
                     "
     gene            9211..9894
                     /locus_tag="JNZ89_002390"
     CDS             9211..9894
                     /locus_tag="JNZ89_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418750.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936244.1"
                     /translation="MTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWR
                     VFDFSVLNGSFGQLPGANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDG
                     LGGLRAAQQLMTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKV
                     IFAAYQTSGSAIITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEER
                     RNPTQGAQA"
     gene            9891..10352
                     /locus_tag="JNZ89_002391"
     CDS             9891..10352
                     /locus_tag="JNZ89_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936245.1"
                     /translation="MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKI
                     TGLLDWVGHICEPVMALWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTV
                     LLPAMYLMGNPVQNVGRCLGTAEVNAKYYPHIITVCVINALLSIWVMQLIV"
     gene            10365..11537
                     /gene="iadA"
                     /locus_tag="JNZ89_002392"
     CDS             10365..11537
                     /gene="iadA"
                     /locus_tag="JNZ89_002392"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HAY8936246.1"
                     /translation="MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPS
                     DIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVG
                     LLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIG
                     VKCAISDHRSAAPDVYHLANMAAESRVGGLLGSKPGVTVFHMGDSKKALQPIYDLLEN
                     CDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIP
                     LARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTS
                     SVAGFLNLSGKGEILPGNDADLLVMTPELRIEQVYARGKLMVKDGKACVKGTFETA"
     gene            11602..12513
                     /gene="hypT"
                     /locus_tag="JNZ89_002393"
                     /gene_synonym="qseD"
     CDS             11602..12513
                     /gene="hypT"
                     /locus_tag="JNZ89_002393"
                     /gene_synonym="qseD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /protein_id="HAY8936247.1"
                     /translation="MDDCCAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSR
                     RIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRK
                     IKIAAAHSLSLGLLPSIISQMPPLFTWAIEAIDVDEAVDKLREGQSDCIFSFHDEDLL
                     EAPFDHIRLFESQLFPVCASDEYGEAIFNLAQPHFPLLNYSRNSYMGRLINRTLTRHS
                     ELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGQLVVLNRDELVIPIQAY
                     AYRMNTRMNPVAERFWRELRELEIVLS"
     gene            complement(12506..12898)
                     /gene="iraD"
                     /locus_tag="JNZ89_002394"
     CDS             complement(12506..12898)
                     /gene="iraD"
                     /locus_tag="JNZ89_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313312.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraD"
                     /protein_id="HAY8936248.1"
                     /translation="MMRQSLQAVLPEISGNKTSLLRKSVCSDLLTLFNSPHSALPSLL
                     VSGMPEWQVHNPSDKHLQSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIM
                     LYHDDEPLTFDLVWDNGGWRSATLENVS"
     gene            complement(12895..12978)
                     /locus_tag="JNZ89_002395"
     CDS             complement(12895..12978)
                     /locus_tag="JNZ89_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iraD leader peptide"
                     /protein_id="HAY8936249.1"
                     /translation="MENEHQYSGARCSGQAAYVAKRQECAK"
     gene            13570..14400
                     /locus_tag="JNZ89_002396"
     CDS             13570..14400
                     /locus_tag="JNZ89_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HAY8936250.1"
                     /translation="MSIPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIY
                     LLPLTRGNNHNYDGKSVVEIRKLNIGKQSWPFNYATDTCREFNGITTTGRMLYRNLKI
                     TSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYA
                     GTTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGN
                     DPIIGIEAYPGTAEIHAKMGYNVIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
                     "
     gene            complement(14541..15314)
                     /gene="uxuR"
                     /locus_tag="JNZ89_002397"
     CDS             complement(14541..15314)
                     /gene="uxuR"
                     /locus_tag="JNZ89_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uxu operon transcriptional regulator"
                     /protein_id="HAY8936251.1"
                     /translation="MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLD
                     VTRTVVREALIMLEIKGLVEVRRGAGIYVLDSSGSHNTDSPDANVCNDAGPFELLQAR
                     QLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATH
                     NSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKL
                     AMWQHLENVKQRLLEFSNVDDIYFDGYLFDSWPLDKVDA"
     gene            complement(15529..16989)
                     /locus_tag="JNZ89_002398"
     CDS             complement(15529..16989)
                     /locus_tag="JNZ89_002398"
                     /EC_number="1.1.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructuronate reductase"
                     /protein_id="HAY8936252.1"
                     /translation="MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHH
                     LLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALH
                     PEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKS
                     AIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENV
                     TFPCTMVDRIVPAATPETLQEIADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKV
                     GAQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTNPDYRKAAFALMMQE
                     QAPTLSMPEGTDLKAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQN
                     GGSWRHLALGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLS
                     GIFADDLPQNADFVGAVTAAYQQLCERGARECVAAL"
     gene            complement(17070..18254)
                     /gene="uxuA"
                     /locus_tag="JNZ89_002399"
     CDS             complement(17070..18254)
                     /gene="uxuA"
                     /locus_tag="JNZ89_002399"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709912.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HAY8936253.1"
                     /translation="MEQTWRWYGPNDLVSLADVRQAGATGVVTALHHIPNGEVWSVEE
                     ILKRKAIVEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCY
                     NFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAE
                     RFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKA
                     IIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYG
                     VRADNDLVDMIKQFGPRIYFTHLRSTMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEE
                     HRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF
                     SR"
     gene            18594..18798
                     /locus_tag="JNZ89_002400"
                     /pseudo
     CDS             18594..18798
                     /locus_tag="JNZ89_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031542.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(19041..>19150)
                     /locus_tag="JNZ89_002401"
     CDS             complement(19041..>19150)
                     /locus_tag="JNZ89_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8936254.1"
                     /translation="TSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ"
BASE COUNT         4473 a         4871 c         4808 g         4998 t
ORIGIN      
        1 taatgcctgc atttgctctg ccgaaagtcc ggtatatcgt tgtatccatt caggatcggc
       61 cccattctgc aacaacaatc ggaggaggct ccgttcccct tctactttcc cttctttcct
      121 ccccctctcc cttcccaaca gccatccatc attatgaatt cgctctgcaa ttgtcattat
      181 tcgctccctg tggtgtggca ttcgcctggt aagttcgctg ataaacgcct taaaacgcgc
      241 ttcatcgcca gtcagtaaaa tgtaatttaa cagcgcagtt atctggctgt cattagcaca
      301 ctctgtaacc agtaatacta ccagttggtc aataagcccc atcaaatcgc gctggcgaat
      361 atgcttttgg atcaactcca acagggcgac tctgcgatgc tgcacaatct cgtcgtctgg
      421 cacgacagtg acatccacca gcgggaacgc tgcgctataa agtttccgtg cggtagtcgg
      481 ggcggcaaat tcgtccagcc agcacaggga ccaggggtaa ggactacggc taccgtgata
      541 aaacagcatc gggataacca gcggtagcgg ccggcgttta tcatgctcga tatggcgctg
      601 catcaccgcc atggaatatc gcatcaggcg aaatgccata tgaatatcct cgcggctctg
      661 atgttcaatc actacgtaaa tataaccatc accttcacgg gtctttaccg accacagaat
      721 atcggagtgt agcgcccgca atttttcatc gacaaagctg gcggattcca gttttaagct
      781 gtcgagatcg cacagttcac gtaaatcttt gggtaagtgg atctccataa aatcccgcgc
      841 ggtgtcaggg tgagtgagaa aggatttaaa taatgcgtca tgtggcgtgc tggtcgtgaa
      901 gtttgtcatg gcgatccgtc acctgtagat aagatggccc gactttagcg actaacaaaa
      961 ccattctcac ccggcaattt ctcgttcccc gaggtgcttt ccaggcgtct gcaaacgata
     1021 catttttccg gaaacaggct cgcgttttac atttcctgta cccggcagat attccccttt
     1081 ccaccgcgct cttttgatta accgcaaatt ttaattacac ttaaggtgta tattttctat
     1141 gcaacccatc aattaaagag gtgtaatgtg ctgatgacta tttgtaatcg ttatacattc
     1201 tgacctggag tcagaaggta tttctctgtc tgtgtgttca caggcagtgt ggttgattac
     1261 atgaaattca gtacatttgc agtctcgttg cccttctcgc ctgcctttcg tcattaccga
     1321 cggtattgaa tttcgttttc cccgttgggg ttctccgaac aaggagttgt ttgttatgcc
     1381 acgttttttt gcccgccatg ccgccacgct gtttttcccg atggcgttga ttttgtatga
     1441 ctttgccgcg tacctgtcga cggatctgat ccagccgggg atcattaatg tggtccgtga
     1501 ttttaatgcc gatgtcagtc tggccccggc agccgtcagt ctctatctcg cgggcggtat
     1561 ggcgttacag tggctgctgg ggccgctttc cgacaggatt ggccgcaggc cggtgctgat
     1621 taccggggcg ctaatattta cccttgcctg cgctgcgaca atgttcacaa cgtctatgac
     1681 acagtttctt atcgcgcgtg caattcaggg caccagtatc tgttttattg ccaccgttgg
     1741 ttatgtcacg gtgcaggagg cgttcggcca gacaaaaggg atcaagttga tggcgattat
     1801 cacctccatc gtactgattg cgccgattat tggcccgctt tccggcgcag ctctgatgca
     1861 ctttgtgcac tggaaagtcc tttttgccat cattgcagtt atgggtttta tctcatttgt
     1921 tggcttactg ctggcgatgc cagagacggt gaagcgcggc gcggttccat ttagcgccaa
     1981 aagcgtcttt cgcgattttc gtaatgtctt ttgcaatcgg ctgttcctct ttggcgcagc
     2041 aaccatctct ttaagctata tcccaatgat gagttgggtg gctgtctcgc cggtgatcct
     2101 gatcgacgcg ggcagcttaa caacttcgca gttcgcctgg acacaggttc cggtgttcgg
     2161 cgcggtgatt gtcgcgaatg ccatcgtggc gcgtttcgtt aaagatccga ccgaaccgcg
     2221 ctttatctgg cgtgctgtac ccattcaact ggtcggcctc gcgctgttga ttatcggcaa
     2281 tctgctgtca ccgcacgtct ggctgtggtc ggtgctgggc accagtttgt atgctttcgg
     2341 gattggtttg atcttcccga ccttattccg ctttacgctt ttttccaata acttaccgaa
     2401 agggaccgtc tccgcatcgc tgaatatggt gatcctgatg gtgatgtctg tctcggtcga
     2461 aatcggccgc tggctgtggt ttaacggcgg tcgcttgccg tttcatctgt tagccgtcgt
     2521 ggcgggcgtt atcgtcgttt tcaccctggc aggattgctt aatcgcgtgc gccaacatca
     2581 ggctgccgag ctggcggagg agcggtgatt tttgcgcgat cctgccgtca ggctctattc
     2641 ttaacgttat gaataaactc attgaactca gacgcgccaa aatgttggcg ctctctttac
     2701 tgcttatcgc cgctgctacc tttgtcgtta cgctgttttt gccgcccaat ttttgggtga
     2761 gcggcgtgaa ggcgattgct gaagcggcga tggtcggcgc gctggcggac tggtttgcgg
     2821 tggtggcgct gtttcgccgc gtgccgattc cgatcatttc tcgtcatacg gcgattatcc
     2881 cgcgtaataa agaccggatt ggcgaaaatc tcggtcagtt cgtgcaggaa aaatttctcg
     2941 atacccagtc gctggtggca ttgattcgac gtcacgaacc ggcgttgttg attggcaact
     3001 ggtttagtca gccggagaac gcccgccgcg ttggtcagca tctgttgcag atcatgagcg
     3061 gttttcttga actgaccgat gatgcgcgta ttcagcgcct gcttaagcgc gcggtccatc
     3121 gggcgattga taaggtcgat ctttccggaa ccagtgcgtt gatgctggag agtatgacca
     3181 aaaacgatcg tcatcaggtg ctgctcgata cgctgatcgc acagttgatc gcccttctcc
     3241 agcgcgataa atcgcgcaag tttattgccc agcaaattgt tcgctggctg gagagcgagc
     3301 atccgctgaa agccaaaatt ttgcctactg aatggctggg cgaacatagc gcggagttgg
     3361 tttctgacgc ggtgaattct ttgcttgatg atatcagccg cgatcgtgcg catcagatcc
     3421 gtcatgcgtt tgatcgcgcc acttttgccc tgatcgacaa gctgaaaaac gatccagaaa
     3481 tggcagcgcg agccgatgcc gtaaaaagtt atctgaaaga agatgaagct tttaaccgct
     3541 atctcagtga attgtggggg gatttacggg aatggctgaa agcggatatc aacagtgaag
     3601 attctcgtgt gaaagaacgt atcgcgcggg cgggtcaatg gtttggcgaa acgttaattg
     3661 ccgatgatgc cttgcgggca tcgttaaatg gtcacctgga acaagccgcg caccgcgtcg
     3721 cgcctgagtt ttccgcattc ctgacgcgcc acatcagcga tacagtaaaa agctgggatg
     3781 ctcgggatat gtcgcggcaa atcgagttaa atatcggcaa agatctgcag tttatccgtg
     3841 tcaacggtac gctggttggc ggttgtattg ggctaatttt atatttgttg tcgcagctcc
     3901 cggccttgtt ccccctcagc aatttttaga aatccatgaa aaactaagtg gctaaccgcg
     3961 agagagatca aataaaccac actaaaagaa tggtaataat gtggcctctt ttcattatct
     4021 cccgtggtac ggggaaggaa aatcatgtca cttatcaccg atctacccgc cattttcgat
     4081 cagttctctg aagctcgcca gaaaggcttt ctcaccgtca tggatctcaa ggagcgcggc
     4141 attccgctgg ttggcactta ctgcaccttt atgccgcaag agatcccgat ggcagccggt
     4201 gcggttgtgg tttcgctctg ttctacctct gatgaaacca ttgaagaagc ggagaaagat
     4261 ctgccgcgca acctctgccc gctgattaaa agcagctacg gcttcggcaa aaccgataaa
     4321 tgcccctact tctacttttc ggatctggtg gtcggtgaaa ccacctgcga cggcaaaaag
     4381 aaaatgtatg aatacatggc ggagtttaag cccgttcatg tgatgcagtt gccgaacagc
     4441 gttaaggacg atgcctcgcg tgcgttatgg aaagccgaga tgctgcgctt gcaaaaaacg
     4501 gtagaagaac gttttgggca cgagattagc gaagatgctc tgcgcgatgc cattgcgctg
     4561 aaaaaccgcg aacgtcgcgc actggccaat ttttatcatc ttgggcagtt aaatcctccg
     4621 gcgcttagcg gcagcgacat tctgaaagtg gtctacggcg caaccttccg gttcgataaa
     4681 gaggcgttga tcaatgaact ggatgcaatg accgcccgcg ttcgtcagca gtgggaagaa
     4741 ggccagcgac tggacccgcg tccacgcatt ttaatcaccg gctgcccgat tggcggcgca
     4801 gcagaaaaag tggtgcgggc gattgaagag aatggcggct gggttgtcgg ttatgaaaac
     4861 tgcactgggg cgaaagcgac cgagctaatg cgtggcggaa acgggcgatg tctacgacgc
     4921 gctggcggat aaatatctgg cgattggctg ctcctgtgtt tcgccgaacg atcagcgcct
     4981 gcaaatgctc agccagatgg tggaagaata tcaggtcgat ggcgtagttg atgtgatttt
     5041 gcaggcgtgc catacctacg cggtggaatc gctggcgatt aaacgtcatg tgcgtcagca
     5101 gcacaacatt ccttatatcg ctattgaaac agactactcc acctcagatg tcgggcagct
     5161 cagtacccgt gtcgcggcct ttattgagat gctgtaagga gtggcagtga catattcgat
     5221 tggcattgat tctggttcta ccgccaccaa agggatctta ctggcagacg gcgtgattac
     5281 gcgccgtttc ctcgttccaa caccctttcg tccggcaaca gcaattactg aagcctggga
     5341 aactctgcgc gaagggttag agacaacgcc gtttctgacg ctcaccggct atggacggca
     5401 actggtggat tttgccgata aacaagtgac ggaaatctcc tgtcacgggc tgggcgcacg
     5461 gtttcttgcg ccagcaacgc tgcgcggtaa tcgacatcgg tggtcaggac agcaaagtga
     5521 ttcagcttga tgatgacggt aacctgtgcg atttcctgat gaatgacaaa tgcgcggcgg
     5581 gcaccgggcg tttcctggaa gtgatctcgc gcacgcttgg caccagcgtc gagcaactcg
     5641 acagcattac cgaaaatgtc acgccgcatg ccatcacgag tatgtgcaca gtgtttgccg
     5701 aatcagaagt gatcagcctg cgctcagcgg gcgtcgcgcc agaagcgatt ctcgccggag
     5761 tgattaacgc gatggcgcgg aggagtgcca atttcattgc tcgtctctcc tgtgaagcgc
     5821 cgattctgtt tactggtggc gttagtcatt gccagacgtt tgcccggatg ctggaatctc
     5881 acctgggaat gccggtaaat acccatcctg atgcgcaatt tgctggcgca attggcgcgg
     5941 cggtaattgg tcaacgagtg aggacacgcc gatgaaagag tttttatttt tatttcactc
     6001 cacagtcggc gtcatacaaa ctcgcaaagc gttgcaggca gcgggcatga cttttcgcgt
     6061 cagcgatatt ccccgtgatt tacgcggcgg ctgcgggtta tgcatttggc tgacctgtcc
     6121 ccccggcgaa gaaatacaat gggtgatccc tgggctgact gagtcaattt attgccagca
     6181 ggatggtgtc tggcgctgca ttgcacatta ccgggtttct ccgcgttaag gattcattaa
     6241 ggtcgctacg tatacttctc gatatcttat tgatttgcct taaagggatt accgtgacaa
     6301 aaagtatttc gttaagtaaa cgcatctccg ttattgtgat tctttttgcc attgtggcag
     6361 tgtgtacttt cttcgtgcaa tcttgcgccc gtaaaagcaa tcatgcagca tcatttcaga
     6421 attaccacgc caccattgac ggcaaagaaa ttgcaggcat aacgaataat atctcttcgc
     6481 tgacctggtc ggcacaaagc aatactcttt ttagcactat caacaaacct gccgccattg
     6541 ttgaaatgac caccaatggt gattttatcc gcacaattcc tctggatttt gttaaggatc
     6601 tcgagacgat cgaatacatt ggcgataatc agtttgtcat tagcgatgag cgcgattacg
     6661 ccatttatgt gatttcactg accccaaact cggaagtaaa aatcctcaaa aaaataaaaa
     6721 tcccgctgca agactcccca accaattgcg gttttgaagg gttagcttat tctcgccagg
     6781 atcacacttt ctggtttttt aaagagaaaa atccgattga ggtctacaaa gttaacgggc
     6841 tgttaagtag caatgaatta cacatcagca aagacgaggc actacaacgg caatttactt
     6901 tagatgatgt gtccggcgca gaatttaacc agcaaaaaaa tacgcttctg gtgctgtctc
     6961 atgaatctcg cgcactccag gaagtaaccc tggttggcga ggttatcggt gaaatatcac
     7021 taaccaaagg tagtcgaggt ttgtcgcata acatcaaaca ggccgaaggg attgcgatgg
     7081 atgcctctgg taatatttat atcgttagcg aaccaaatcg tttttatcgc tttaccccta
     7141 aatcatcgca ttaacaggct ggcatatttc acctttttgt tattaacttg ttaacaacaa
     7201 aaatgacata caaggttaaa catgccttcg tcctcgcatc ccgtagaacg cttttctttc
     7261 agcaccgcgc ttttcgggat gctggttctg accctaggta tgggattagg tcgcttcctt
     7321 tatacgccta tgttgcccgt cattatggcg gaaggggcgt tttcatttag ccagctctcg
     7381 tggattgcca gcggcaacta tgcggggtat ctggctggca gtctgctatt ttcgtttggc
     7441 gcatttcacc agccgtcgcg cctacgccca tttctgttgg tttctgccct ggcgagaggg
     7501 ttgttgatcc tcgcaatggc atggttgccg ccatttattc tggtgttatt gattcgcttc
     7561 ctggcgggtg tcgccagcgc cggtatgctg atttttggtt cgacgctgat tatgcagcac
     7621 acgcgccatc cttttgtgct ggcagctttg ttttctggcg ttggcattgc actgggcaac
     7681 gaatatgttc tggcaggcct gcattttgcc ttctcctcgc aaacgttatg gcaaggcgcc
     7741 ggggcgcttt ctggcatgat gctgatcgca cttacgcttt taatgccctc gaaaaaacac
     7801 gccatcgcac caatgccatt ggcaaaaacg gagcaacaga taatgagctg gtggttactg
     7861 gctattctgt acggccttgc gggatttggt tatatcatcg tcgcgactta cctgccgctc
     7921 atggcgaaag atgcaggctc accattgtta accgcccatc tctggacgtt agtcggctta
     7981 tcaattgtgc caggctgctt tggctggcta tgggcagcaa aacgttgggg ggctttgcct
     8041 tgcctgacgg cgaatttgct ggtgcaggct atcagtgtgc tgcttactct cgccagcgac
     8101 tctcctctct tgcttatcat tagtagtatc ggttttggcg gtacctttat gggcacgaca
     8161 tctctggtga tgactatcgc ccgccaactg agcgttccgg gaaatctcaa tcttttaggc
     8221 tttgtgacgc tcatttacgg cattggacaa atcctcggcc cggcgctgac cagtatgctc
     8281 ggcaatggaa catcggcgct tgccggcgcc actctctgcg gcgcggcggc gttgtttatt
     8341 gctgcgctta tcagcacagt acaattattt aagctgcaag tggtcacttc atgaggagtg
     8401 tttcccttac cactcaagaa attcgaccgc aaccgttgat gtcagccaga ctccgttttc
     8461 cgcttgccag aaaggaatgc ctcgtttcgc catttcctgt gctttgacgg ttaagacaac
     8521 cggcgatccg tgtcttgctc ccactttgcg tgccgttgct tcatcagcag agagatgcac
     8581 gtaatgacga tcccctgcaa tcagcccctg tttttttatc tcgtcaagga aacggcttgc
     8641 cgtaccgtgg tagagaaact gtggcggtgt tttttcggca aaggaaatag cgacctgcga
     8701 agtcgaatgc ccctgaaccg cgcggatgca cctaccatca ctggaataac taaaacgctt
     8761 tttatcgctg gttgcgacca cggtatccag caatgcacgg gttaatcgct tgcccgcttt
     8821 ttgggcacaa agtatgagct tatcgatatc cgcccatcct tcacggtcca gtacgatacc
     8881 aatcgcctcc ggtttgtgtc ggaggacaaa acttaaaaac ttgctcgtat ccgccagctc
     8941 tttttcgttg tgctttgcca tctcgttttc gtccctggat tttctgtttt tatttaccaa
     9001 tgtcattgtc actgggttta tgaattttct gcaactcaat cctgcgcaga accttttcca
     9061 cacagcgtaa tgtttcccct atgcaaaaaa cgcatagcca gaaacatact tgcattttcc
     9121 ccatacccac atggctgata aggtttttca gttccaggaa ttttcctggc tcaagcaaca
     9181 cacaaacaca aaaaaacaat ggggattgtt atgacacaac aaggggatgc tgtagccggg
     9241 gagctggcga cagaaaaagt gggcattaaa gggtatctgg ctttttttct caccataatc
     9301 tttttttccg gtgttttttc cggaacagac agctggtggc gcgtttttga tttttccgtt
     9361 ctgaacggat cgtttgggca actgcctggt gcgaacggag ccaccacctc atttcgcggc
     9421 gcgggtggtg cgggggctaa agatggcttt ctctttgcgc tggagctggc accgtcagtc
     9481 attctctctc tggggattat ttcaattacc gatggtcttg gtggattacg cgccgcgcag
     9541 cagttaatga cacctgtgct aaaaccgttg ttgggcattc cagggatctg ctcgctggcg
     9601 ctgatcgcta acttgcaaaa cactgatgcc gccgccggta tgaccaaaga gctggcgcag
     9661 gaaggtgaaa ttaccgaacg cgataaagtg attttcgccg catatcaaac cagcggtagc
     9721 gccatcatca ccaactactt ctcttccggc gtcgcggtgt tcgcctttct gggcacgtcc
     9781 gtaatcgtac ctttagccgt catcctggtg tttaaatttg tcggagccaa cattttgcgc
     9841 gtctggctta acttcgaaga acgtcgcaac ccaacgcaag gagcgcaagc atgacaactc
     9901 aggtccgcaa aaacgtcatg gatatgttta tcgatggcgc gcgccgtggc tttactatcg
     9961 ccacgaccaa cctgctgcca aacgtggtga tggcgtttgt catcattcag gcgctgaaaa
    10021 ttaccggcct gctcgactgg gtggggcata tctgtgaacc cgtaatggcg ctgtggggat
    10081 tacccggtga agcggcaacc gtccttttag ccgcattaat gagtatgggg ggcgcagtcg
    10141 gtgttgccgc cagtctggca accgctggcg cattaaccgg tcacgatgtc accgttttac
    10201 tgcccgcgat gtatttaatg ggcaacccgg tgcaaaatgt cggtcgctgc ctggggacag
    10261 ccgaagtgaa tgccaaatat tacccgcata tcattacggt ctgcgtgatt aacgcattgc
    10321 tgtcgatctg ggttatgcag cttattgttt aacaaggagt taccatgatt gattataccg
    10381 cagccggttt taccctgctg cagggagcgc atttgtatgc gccggaagat cggggaattt
    10441 gcgatgtcct cgtcgctaac ggcaaaatta tcgccgttgc cagcaatatc ccttctgaca
    10501 ttgtaccgaa ctgcacggtt gtcgatctca gtgggcagat cctctgccca ggttttattg
    10561 atcaacacgt ccatttgatt ggcggtggcg gcgaagcagg tcccacgacg cgcacgccgg
    10621 aagtggcgct aagtcgcctg acggaagcgg gcgtcacgtc agtggttggt ctgctgggca
    10681 ccgactctat ctctcgccac ccggaatccc tgctcgccaa gacccgtgcg ctcaatgaag
    10741 aaggcatcag cgcctggatg ctgaccggcg cttatcatgt cccttcccgc actattacgg
    10801 gttccgtgga aaaagacgtg gcgattatcg atcgtgtgat tggcgtgaaa tgcgccatct
    10861 ctgatcaccg ttctgccgca ccggacgttt atcacctggc taatatggcg gcagaatccc
    10921 gcgttggcgg tttgctcggc agtaaacctg gcgtcaccgt gttccacatg ggcgacagta
    10981 aaaaggcgtt acagcctatt tatgacctgc tggaaaactg cgatgtgccg atcagcaagc
    11041 tgctgccgac ccacgttaac cgcaacgtac cgttgtttga gcaggcgctg gagttcgcgc
    11101 gcaaaggcgg caccatcgat atcaccagca gcattgacga accggtcgcc cctgccgaag
    11161 gtattgcccg cgccgttcag gcgggtattc cgctggcacg cgtcaccctc agctccgacg
    11221 gcaacggtag ccagccgttc ttcgatgacg aagggaattt aacccatatc ggtgttgcag
    11281 gttttgaaac gttgctggaa accgtgcagg tgctggtcaa agactatgat ttcagtatca
    11341 gcgatgccct gcgcccgctc accagtagcg tagccggttt ccttaacctg agcgggaaag
    11401 gcgaaattct gcctggcaat gacgcagact tactagtcat gacgccagaa ttgcgcattg
    11461 agcaggtata tgctcgcggc aaactgatgg tcaaagacgg caaagcctgc gtgaaaggaa
    11521 cgtttgaaac ggcttaaacg gttgtcagcc gccctaatgg acgtagaatg cccgcaaggg
    11581 cggctgacag agtaaaacgt aatggatgac tgttgtgcgg ttttgcataa tattgaaacc
    11641 aaatggcttt atgattttct gaccctggaa aaatgccgca atttttccca ggcggcagtc
    11701 agtcgtaacg tctcgcaacc ggcattcagc cgccgcatcc gcgcgctgga acaggcgatt
    11761 ggcgttgaat tgtttaaccg ccaggtgacg ccgctgcaac tctcagaaca agggaaaatc
    11821 ttccattcgc agatccgcca tctgttgcaa cagttagaaa gtaaccttgc agagctgcgt
    11881 ggcggcagcg attacgcgca acgtaaaatc aagatagccg ctgcacactc tctttccctc
    11941 ggtctgttac cgtccattat cagccagatg ccgccgctct ttacctgggc gattgaagct
    12001 attgatgtcg atgaagcagt cgataaactg cgtgaagggc aaagtgactg tattttttcc
    12061 tttcacgacg aagatttgct ggaagcaccg tttgaccaca ttcgcttatt tgaatctcaa
    12121 ttgttccccg tttgcgccag tgacgaatac ggagaagcaa tttttaacct cgcgcagcca
    12181 cactttccgt tactgaatta cagccgcaac tcctacatgg ggcgattgat taatcgcacc
    12241 ctgacgcgcc acagcgagtt aagtttcagc accttttttg tctcttcgat gagcgagcta
    12301 ttaaagcagg ttgccctcga cggctgtggg attgcctggc tgccggagta tgccatccaa
    12361 caagaaattc gcagcgggca actcgttgtg ctgaatcggg acgaactggt gatcccgatt
    12421 caggcctacg cataccgtat gaatacccgc atgaatccag ttgccgaacg cttctggcgt
    12481 gaactgcgcg agctggagat tgtgcttagc tgacattctc aagcgtcgca ctgcgccaac
    12541 cgccattatc ccagaccaga tcaaacgtta gcggttcatc gtcgtggtac agcattatct
    12601 caaggctgat cgccagagtg tggcagtacg cttctttcaa attaacctgc aacgccgcaa
    12661 tccgtggctc atgaaataac agtgcagaac gcagctgacg gcaataccag ctctggagat
    12721 gtttgtcgct cgggttatgc acttgccact cgggcatgcc tgaaacaagt aatgacggta
    12781 atgccgaatg aggagaatta aaaagagtga ggagatcgct gcataccgat ttacgcagca
    12841 atgacgtttt attgcctgaa atttcaggta aaacagcctg aagtgattgg cgcatcattt
    12901 tgcgcactcc tgacgtttag caacatatgc ggcttgccct gaacaccggg caccactgta
    12961 ttgatgctca ttttccatag ccattccctt ttgttcatta catccatgtc agtctgagac
    13021 aggcctgaat cctgtcagca aagtataaaa ccttacttgc ctatgaatat ctactgactt
    13081 ttcaggaaaa aagtcatgat ttgataaaaa tcatcaaact caaaaaaaaa ccgctagtat
    13141 attctgaata ttccgaatag ttacgtagat gaaaatactt gtcaccgccg ctacttaatt
    13201 ccggtggaaa attatttatt tccgcataat cagccatgta ttatttgaaa caattagttt
    13261 gtaaataata taaattgata acatatcaaa tacatcaaaa ataccattca taggcattat
    13321 taatatagac atcaatatag caacatcaaa ttccaattag taataagata tgctttttaa
    13381 ttgcatgaaa ataatttcaa atgagcgttt tttgatactt tagagtgttt cctacccttt
    13441 aatatcaccg tgtagagttg atatcactac aacagaaaca tgcatgtcat ttttttactt
    13501 cttttttact acagaaaaat ttatctattt ttctaaacat cggtgaaata ctcataaaag
    13561 gtaactatta tgtctatacc attaagcaat gcccttcaga gtcaaattat tacagataat
    13621 cacttccttc atcatccaaa agtcgacaat aagttaacac gtgaatatga atatacacgc
    13681 atggatacgg aaaatatcta tcttctgcct cttactcgtg gaaataacca taattacgat
    13741 ggaaaaagcg ttgtcgaaat tagaaaactt aatattggca aacagtcctg gccatttaat
    13801 tatgcgacag atacatgcag agaattcaat ggtattacaa caacaggacg tatgctctat
    13861 cgaaacttga aaatcacctc agctttagac gaaatatatg gtggcatatg taaaaaggcg
    13921 catgctgcta cagagttagc agaaggttta cggctaaatt tatttatgaa gagccctttc
    13981 gatcctgttg aggactatac agttcatgaa ataacattag gccctggtta caatgttcct
    14041 ggttatgccg gaaccacgat aggatatatt tcaacccttc cagcttctca ggcaaaaaga
    14101 tggaccaatg agcagccaag aattgatatc tatattgatc agataataac tgtctcaggg
    14161 gtggcaaatt cttccggatt cgcccttgcc gcattactta atgctaatat tggaatggga
    14221 aatgacccaa taattggtat agaagcctat cctggtaccg cggagatcca tgcaaaaatg
    14281 ggatataacg ttatccccgg tgatgaagat gcgccactca aacgcatgac tctgcaaccg
    14341 tcatctcttc cagaactgtt tgaattaaaa aatggtgaat ggaattatat tggcaaataa
    14401 ccactgagaa gaatgagtac taacattcag gttatataga tatttaaaca ataccctgca
    14461 atttacaaag taatactcat tgcgacttct taatttaaga aagcgcaagg aacgtttacc
    14521 cttgcgctta tcataatcag tcaggcgtcg actttatcca gcggccatga atcaaacaga
    14581 tagccgtcaa aataaatatc gtcaacgttc gagaattcca gcagacgttg cttaacgttt
    14641 tccagatgct gccacattgc cagcttcgcc gctcgggcat cttttttgat taacgcggca
    14701 aggatctgtt tgtgatcgcc caaccactct ttgcgataca ggctgtcatc cagatggctg
    14761 tgcaactgga tccacattgg attgttttcc cgccactgcc aggactgacg gaataactcc
    14821 accagcatgc tgttatgcgt tgcttcagca atggcgagat ggaactgcat gtcaccgctt
    14881 tcgctgctac ccggcgcgct ggaagccagt tcacgctctt ccagttgcaa tgcctgacgc
    14941 attttgacga tatcttcgcg ggtagcctgc agggcggcaa attccgcgat gttgctctca
    15001 agaagctgtc gcgcctgcaa caattcaaag gggccggcat cattgcagac gttggcatcc
    15061 ggactgtctg tgttgtggct gcctgagcta tcaagaacat agataccggc accccggcgc
    15121 acttccacca gccctttgat ctccagcatg atcagcgctt cacgtaccac cgtccgcgtg
    15181 acatcaagca tttctgcaat ttcacgctcc ggcggcagcc gttcgccagg attgtacggc
    15241 gtctttatga tcagatcgcg gatcatcgcc ccgacttcct ggtaaggtct ttgcgcagag
    15301 gtggcagatt tcatggtgtt gtgtccgtta ggtgcggtta atcaaatttt tgccggatgc
    15361 ggcgtgaacg ccttatccgg cctacaacgg gcaattttac ggcccccgtt aatctcaaac
    15421 tataccatta gcactggaag ttggcacgta caggtgggca aaaaaacgaa aactggtcaa
    15481 ccaaatatca gtttgattga ccagtaagtc tgtagggtaa tcagttagtt acagcgcagc
    15541 cacacactcg cgcgcaccgc gttcgcacag ctgctgatat gccgccgtca ccgcgccaac
    15601 aaagtcggca ttctgcggca gatcatcggc aaaaataccg ctcaggccca gcagcgcttt
    15661 cacgcggtct gcgccctgat actgcgcgtt aatcttctgg aactcggcca gcatcgggtc
    15721 gaccacgtca atggcattac cctgctcatc cacgccctgg gtgtaacgca tccagccagc
    15781 cacgcccagc gccaggtgac gccagctgcc gccgttttgc aggtgcagac gcaccgggtc
    15841 cagcagacgc tgcggtaact tctggctgcc gtccatcgca atctgccagg tacggtgacg
    15901 cagagacggg ttgctgaaac gctcgatcag cagcgtcgca taggccttca ggtccgtacc
    15961 ctccggcata gacagcgttg gcgcttgttc ctgcatcatc agggcaaagg ccgctttgcg
    16021 ataatccggg ttagtcatgg tgtcggcaat agtttcatag ccgccgaggt aaccgaggta
    16081 tgccaggaaa gagtggctgc cgttcagcat acgcagcttc atcatttcga acggcacaac
    16141 gtctgcaacg aactgtgcgc ccactttatc ccagtccggg cgaccattaa cgaagttatc
    16201 ttcaatcacc cactgacgga acggttcgca ggcaatggcg cacgggtcgt aaacacccag
    16261 ctggtcagca atttcctgta aggtttctgg cgtcgccgcc ggaacgatgc ggtcaaccat
    16321 ggtgcacggg aaggtgacgt tctcttcaat ccatgccgcc agctgcgggt cacgtgcctg
    16381 agccagcccc agtaccgcga ccttcgccac atgaccgttt tcacgcacgt tatcgcagga
    16441 catcaccgta aatgctttca gccctttttc acgacgcaga cgcaaggctt cgacgatgta
    16501 accaatcgcg gacttcggcg cagtcgggtt ttctagatcg tgcttgatca gcgggttatt
    16561 gagatccagt tgaccgcttg ccgcatcagc gcagtagcct ttttccgtga ccgttagaga
    16621 gacaatcgcc gtttgcggac gcgccatcgc gttgagaata ccttcgcagc cgtcgatttc
    16681 cggatgcagc gcttctttca tcgaaccgat aattttcagc tcggtgcttt ctgcgccttt
    16741 ttccgctacg gtgtacagca gttgctgttt tttcaggttt tcgatcagca cgcggtcgtt
    16801 gcctggcatc aggttaactt cgcagatgcc ccagtcgctg tcggtgcttt ccagcagatg
    16861 atgggtatac agcgcctgat gtgcgcggtg aaacgccccg caaccgagat gcacaatgcg
    16921 tgattccaga cgagaatgat cccatgacgg acgggcaacc ggcagattgc tgtcaacaat
    16981 agtagtcatc gtaaactcca gaatccgtct tcagagagtg acggcaagga agaaggaacc
    17041 ggcacggcgc gcagccatgc cggtggatat taacggctaa agaaagcgcg ctggatcgcc
    17101 agttcgacac cgcgaacttc ggccaggcct ttcagacgac caattgcgga gtaacctggg
    17161 ttggttttct tcttcaggtc gtccagcatc tgatgaccgt ggtccggacg catcgggatc
    17221 aggtcttctt tgccttccgc tttacgacgg tgttcttctt caacaatcgc tttcaccact
    17281 tcgtacatat caacgtcacc gttcaggtgc gccgcttcgt ggaaggtttt cgggttatct
    17341 tcacgcatgg tggagcgcag atgggtgaag taaatacgcg gaccgaactg cttgatcata
    17401 tcaaccagat cgttgtcagc acgcacgccg taggaaccgg tgcacatggt gaaaccgttc
    17461 gccatgctgt ttacggtatc aaccatccac tgcatatctt caatggtgga aacaatgcgc
    17521 ggcaggccga ggatcgggcg cggcggatcg tccgggtgaa ccgccatacg cacgccaact
    17581 tcttcagcaa ctggaataat cgctttcagg aagacggcaa agttttcgcg cagcttcgct
    17641 ttatcgatat ctttgtacag ctccaggtgc ttacggaact ggtcgagggt atacccttct
    17701 tccgcgcccg gcagaccggc aatgatgtta cgcgtcagac gcgctttgtc ttcatcgctc
    17761 atagtggcga agcgttcagc tgcctgagca atttcttctt cggtgtaatc cgcttccgcg
    17821 cctggacgtt tcaggatatg catttcgaat gcagcgaatt cgatctggtc gaagcgcaga
    17881 gctttggagc cgtctggcag cacgtattcg aggtcagtac gggtccagtc gagcaccggc
    17941 atgaagttgt agcacacggt gcgaatgccg cactgcgcca ggttgcgcag agtctgctga
    18001 tagttagcga tccactgctc atagttgcca gtgtgggttt tgatatcttc gtgaattggt
    18061 acgctttcta cgacagacca caccaggcct gcgtcttcaa cgatcgcctt gcgtttgagg
    18121 atctcttcta cggaccatac ttcgccgttc gggatatggt gcagcgcggt aaccacgcca
    18181 gttgcgcccg cctgacggac atcagctaaa gaaaccagat cgtttgggcc gtaccagcgc
    18241 caggtctgtt ccatgatttt tcctctttca catagtgggt tccacagcaa agagacgcgg
    18301 aaccctggag ttgtttaggt atccggatga acaaccagac cgcagccgtg gcgttgcatc
    18361 ggatgagatg gcgtataagt tctacctttt ggtaagatat gtcaacccaa atcctgaaat
    18421 tggttaacca aatcacaaga atttcactct catggttgtt gctgcaaatt gcagcaaaag
    18481 gtaatcgatg gttattgatc agaggatgtg acattcatcg caacaatggt tgaccaattt
    18541 acataacatg tcgcccaaaa taacaacggt tcaaccaggt aaggtaaaac gttatgcatg
    18601 tgcttaacat tctctgggta gtattcggca ttggtctgat gctggtactg acaacgaccg
    18661 caggttcaga cacattcact gcattagcaa tgcctcttag attattttga cctgtcagta
    18721 aaagacacgt tgaaaacctg gggtctgctg gaactggtca actccgtggt tgggctgatt
    18781 attagcaagg tagcgtaaaa gaacaccaga gcctgccaat ggcaggctct gactgatgac
    18841 aaagtctaaa aatgtgcccg gacagtcccc tcgcccctcc ggggagaggg ttagggtgag
    18901 gggaacagac cagcaaagtg cgctttgttt atgccagatg cgacgctgac gcgtcttatc
    18961 tggcctacaa agggctaacg tgcaggtttt tagcttcagg taatattgcg taactgcatt
    19021 agcaatgccc tgtgatttct ttattgataa acaaaagtca cgccaataat cgattgcaca
    19081 ttccctgcag tcacctgccc tccggtacgt gcgtaatttg ccgttaatcc cagacttacc
    19141 gccgaagttc
//
LOCUS       DADMIB010000075        19086 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.075, whole genome shotgun sequence.
ACCESSION   DADMIB010000075 DADMIB010000000
VERSION     DADMIB010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19086
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.075"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(31..2478)
                     /gene="glgP"
                     /locus_tag="JNZ89_002402"
     CDS             complement(31..2478)
                     /gene="glgP"
                     /locus_tag="JNZ89_002402"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen phosphorylase"
                     /protein_id="HAY8936255.1"
                     /translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
                     TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
                     EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
                     VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
                     IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
                     SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRL
                     LIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
                     LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
                     ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCD
                     FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
                     TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
                     VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
                     DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
                     RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
                     TIKEYADHIWHIDPVRL"
     gene            complement(2497..3930)
                     /gene="glgA"
                     /locus_tag="JNZ89_002403"
     CDS             complement(2497..3930)
                     /gene="glgA"
                     /locus_tag="JNZ89_002403"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HAY8936256.1"
                     /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
                     PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
                     YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
                     HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE
                     ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
                     KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
                     QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
                     PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRASLWRF
                     VQRQAMAMDFSWQVAAKSYRELYYRLK"
     gene            complement(3930..5225)
                     /gene="glgC"
                     /locus_tag="JNZ89_002404"
     CDS             complement(3930..5225)
                     /gene="glgC"
                     /locus_tag="JNZ89_002404"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HAY8936257.1"
                     /translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
                     VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
                     PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
                     ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
                     DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
                     VGTLKAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
                     SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
                     GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
     gene            complement(5243..7216)
                     /gene="glgX"
                     /locus_tag="JNZ89_002405"
     CDS             complement(5243..7216)
                     /gene="glgX"
                     /locus_tag="JNZ89_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HAY8936258.1"
                     /translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
                     HRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDG
                     EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWGSTIIYEAHVKG
                     LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
                     WGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
                     FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
                     FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEW
                     NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
                     VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG
                     TPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVE
                     NRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
                     GEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR"
     gene            complement(7213..9399)
                     /gene="glgB"
                     /locus_tag="JNZ89_002406"
     CDS             complement(7213..9399)
                     /gene="glgB"
                     /locus_tag="JNZ89_002406"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HAY8936259.1"
                     /translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
                     DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
                     PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
                     GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
                     LICGLPEKVVQTEERKKANQFDASISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
                     KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
                     DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
                     WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
                     SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
                     FGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
                     FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
                     GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
                     SMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE"
     gene            complement(9672..10775)
                     /gene="asd"
                     /locus_tag="JNZ89_002407"
     CDS             complement(9672..10775)
                     /gene="asd"
                     /locus_tag="JNZ89_002407"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HAY8936260.1"
                     /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA
                     PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
                     MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
                     YQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNF
                     GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
                     AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
                     LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
     gene            10967..11560
                     /gene="yhgN"
                     /locus_tag="JNZ89_002408"
     CDS             10967..11560
                     /gene="yhgN"
                     /locus_tag="JNZ89_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YhgN"
                     /protein_id="HAY8936261.1"
                     /translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
                     LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
                     EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
                     RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
     gene            complement(11617..12957)
                     /gene="gntU"
                     /locus_tag="JNZ89_002409"
     CDS             complement(11617..12957)
                     /gene="gntU"
                     /locus_tag="JNZ89_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HAY8936262.1"
                     /translation="MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSG
                     MPLDKIAATMEKGMGGPLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAH
                     YAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVP
                     GPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL
                     GEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLV
                     AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
                     GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG
                     GSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
     gene            complement(12961..13488)
                     /gene="gntK"
                     /locus_tag="JNZ89_002410"
     CDS             complement(12961..13488)
                     /gene="gntK"
                     /locus_tag="JNZ89_002410"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417894.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HAY8936263.1"
                     /translation="MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHP
                     RRNIEKMASGEPLNDDDRKPWLQALNDAAFAMLRTNKVSLIVCSALKKHYRDLLREGN
                     PNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
                     EGVVASTIEVIKKGK"
     gene            complement(13627..14622)
                     /gene="gntR"
                     /locus_tag="JNZ89_002411"
     CDS             complement(13627..14622)
                     /gene="gntR"
                     /locus_tag="JNZ89_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HAY8936264.1"
                     /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
                     DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
                     YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
                     GFDNFEAARQMTTAIIARGHCHIAYLGARLDERTIIKQKGYEQAMLDAGLVSYSVMVE
                     QSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHG
                     HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI"
     gene            complement(14846..15541)
                     /locus_tag="JNZ89_002412"
     CDS             complement(14846..15541)
                     /locus_tag="JNZ89_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HAY8936265.1"
                     /translation="MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVIN
                     DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHS
                     EYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDM
                     ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHAD
                     SDSEVLLFDLPPV"
     gene            complement(15664..16701)
                     /locus_tag="JNZ89_002413"
     CDS             complement(15664..16701)
                     /locus_tag="JNZ89_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709215.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY8936266.1"
                     /translation="MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ
                     APIYSHIHFISDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTL
                     AQAKELFALAKSKGLSVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVA
                     ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGD
                     LKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGV
                     PEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFE
                     QASPSTVTLAN"
     gene            17033..17521
                     /gene="yhhY"
                     /locus_tag="JNZ89_002414"
     CDS             17033..17521
                     /gene="yhhY"
                     /locus_tag="JNZ89_002414"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY8936267.1"
                     /translation="MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQER
                     LADRPGIKQLVACIDGDVVGHLTIDVQQRPRSSHVADFGICVDSRWKNRGVASALMRE
                     MIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR
                     VK"
     gene            17758..18957
                     /gene="hcp"
                     /locus_tag="JNZ89_002415"
     CDS             17758..18957
                     /gene="hcp"
                     /locus_tag="JNZ89_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000065895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HAY8936268.1"
                     /translation="MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSL
                     LNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYY
                     YIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFL
                     PNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEK
                     TAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLA
                     NLRKEFNKTVRKNFLIKLSKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGT
                     NDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNVMNASH
                     TIKHGAV"
BASE COUNT         4885 a         5050 c         4646 g         4505 t
ORIGIN      
        1 cctttggccc cgttctattt attggtgaac ttacaatctc accggatcga tatgccagat
       61 atgatcggcg tactctttga tagtacggtc agaagagaag tagcccatat tggcaatgtt
      121 cagcatcgct tttgcggtcc actcttcctg aagctcgtag agttcgtcga ctttatcctg
      181 acaatcgaca tagctgcgat aatccgccag aacctgatag tgatcgccga agttgatcag
      241 cgaatcaacc agatcgcgat agcgacccgg atcttccgga ctgaatacac cgctgccgat
      301 ttgcgtcagc acctgatgca gctcctcatc tttctcgtag tattcacgcg gtttgtagcc
      361 ctgacgacgc agttcttcca cttcttccgc tgtgttacca aaaataaaga tattgtcagc
      421 accgacatga tccagcatct cgacattcgc accgtccaac gtaccgatag tcagcgcacc
      481 gttaagcgca aacttcatgt tactggtgcc ggaagcttcc gtccctgcca gcgaaatctg
      541 ttcagacaga tctgccgccg gaatgatcaa ctgcgccagg ctaacgctgt agttcgggat
      601 gaacacgact ttcagcttat cgccaatctg cggatcgttg ttgatcactt tcgctacgtc
      661 attgatcaaa tgaataatgt gcttcgccat gtaataggcc gaagccgcct taccgccaaa
      721 aatattcacg cgcggtaccc acttcgcatc cgggtcggcc ttgatgcggt tatagcgggt
      781 aatcacatgc aacacattca tcaattgacg tttgtattcg tgaatacgtt tgatttgtac
      841 atcgaacaac gcctttggat tcaccaccac attcagctgc tgggcgatat actctgccag
      901 acgctttttg ttctccagct tcgcctgatg cacagcgtga ttaaccattg ggaaatcaca
      961 gtgttgttgc agctcattaa gcaggctaag gtcggtgcgc cagttacggc ccaggtgttc
     1021 gtccagcacg gctgaaagcg atgggttcgc taccgctagc cagcgacgcg gcgtcacacc
     1081 gttggtgacg ttggtgaaac gacccgggaa gattttcgca aagtcggcaa acaacgattg
     1141 caccatcaga ttagagtgca gttccgatac accgttaact ttgtggctca caacaaccgc
     1201 cagccaggcc atacgcacac gacgaccgtt ggattcatca atgatcgacg cccgtcccag
     1261 cagatcggta tcgttcggat actgttcctg caaggttttc aggaaatagt cgttgatttc
     1321 aaagatgatc tgcaggtgac gcggcagaat tttacccagc atatcaaccg gccaggtttc
     1381 cagcgcctcg ctcatcagcg tgtggttagt gtaggagaag acctgacaac acacctcaaa
     1441 cgcgtcgtcc cagctaaatt ggtgctcatc gatcagcaga cgcatcatct caggaatcga
     1501 cagtaccgga tgggtatcat tgagatgaat cgcgatttta tccgccaggt tatcgtaggt
     1561 tttatgcaac tgataatggc ggcttaaaat gtcctgaatg gtcgaggaaa ccagaaagta
     1621 ttcctgacgc aggcgcagct cacgcccgga gtaggtggag tcatccggat acagtacgcg
     1681 agatacgttc tcggagtggt ttttatcttc cactgccgcg aagtagtcac cttggttgaa
     1741 tttaccgagg ttaatttcgc tactggcttg cgcactccac aaacgcaacg tgttggtcgc
     1801 gtcggtgtcg taaccaggga ttatctgatc gtaagcgact cccagaatct cttcggtttc
     1861 aatccagcgc gtttttttac cttcctgctg aatgcgacca ccaaaacgga ctttatagcg
     1921 cgtgttgtgg cgtttgaatt cccacgggtt accgtattcc agccagtagt ctggcgactc
     1981 tttctggcta ccgttaacga tgttctgctt gaacataccg tagtcatagc ggatgccgta
     2041 accgcgcccc ggcaacccta acgtcgccag agaatcaagg aagcaagccg ccagacgtcc
     2101 caggccaccg ttaccgaggc ctgggtcatt ttcttcatca atcagctctt cgagatttaa
     2161 ccccatcgct tccagtgcgc cctgtacatc ttcgtaaatt cctagcgaca acatggcgtt
     2221 ggagagcgta cggccaatca aaaactccat cgacaggtag taaacctgac gagtttcttg
     2281 cgacaactgg gcacggtttg aacgtaacca gcgctccacg agacgatcgc gcacagcaaa
     2341 taacgttgcg ttcagccatt catgtttatt ggcgacgacc gggtcctttc caatcgtaaa
     2401 catcagcttg taagcgatag agtgcttaag agcttctacg ctaagcgtgg gcgatgaata
     2461 tgtaaacgga gcattcatat aggcgtttcc tgaaaactat ttcaagcgat agtaaagctc
     2521 acggtacgac ttcgccgcga cctgccagct aaaatccatt gccatagcct gacgttgcac
     2581 aaaccgccac agtgaagcac gagaccacag tacaaaagca cgtcgaatag cccgtaacag
     2641 cgaccaggca ttactatctt caaagacaaa cccactggcg acgccatctg caaggttctc
     2701 aagagaacag tcagaaaccg tatcagcaag cccaccggtg cgccgcacta acggcagcgt
     2761 accgtacttc aatccataaa gttgcgttaa gccgcacggt tcaaaacggc tgggcaccag
     2821 aatgacgtcc gcgccgccca taatgcgatg cgaaaatgct tcgtgatagc caatctgaac
     2881 gcccacctgg ccggggtatt ccgctgccgc cgcaaggaaa ccttcctgca gcaccggatc
     2941 gcccgcgccg agtagcgcca gctgcccgcc ctgctccaga agacccggta aggcttccag
     3001 caccaggtcg agacctttct ggctggtcag acggctcacc actgcaaaaa gcggcacttt
     3061 atcgtcaacc ttaagcccca ttgcgatttg taactggcgc ttattttccg ctttatcttc
     3121 caacgtatcg cgggtgtaac gcgaggccaa cagtaagtcc gtctctggac tccagatttt
     3181 ctcgtccacg ccgttcagta cgccggaaag acgcccttca cggtgacgct gttgcaacag
     3241 accttccata ccgtaggcaa actgcggttc ggtgatctcg cgagcgtagg ttggactgac
     3301 cgccgtaatg tgatcggcat agtacagacc ggccttcagg aaagagattt gtccgttgaa
     3361 ttccagccca tgaatattaa agaatgacca tggcaattgg atgtcattca tgtgatgtgc
     3421 ataaaacatg ccttgatagg ccaagttgtg cacagtaaac accgacttcg ccggacgccc
     3481 gcgcgccgcc agatacgcag gcgcaaggcc tgcatgccag tcgtgcgcat gcaccacatc
     3541 aggacgccag aatgggtcaa gcccgctggc catttctgcc ccaacccacc ccagcagcgc
     3601 aaaacgcaat acgttgtcgg tataggcaaa taagttggta tcgtgatacg ggcttcccgg
     3661 acgatcatag agatgcggcg cgtcaatcag gtatatgcca accccgttgt aatgaccgaa
     3721 caacagcgtg atatgtccgg cgaaggtatc acgacgggat actacctgcg catcggtcac
     3781 gccacggcga atatcgggaa atgcaggcaa cagtacgcga gcgtcaacgc cgtctgcgat
     3841 ttgtgctgcg ggtaatgccc caataacatc agccagaccg ccggttttaa gcagcgggaa
     3901 catctctgaa catacatgta aaacttgcat tatcgctcct gtttatgccc taacttccgt
     3961 agcatttcgc gcgttaccag cacgatgcct tcttctgaac gatagaaacg acgtgcatct
     4021 tcctctgcgt tttcaccaat caccatgcct tccgggataa cacaagcacg atcgatgacg
     4081 cagcggcgca gacggcacga gcgacctacc catacttccg gtaacaatac ggcggaatca
     4141 atgttgcaga atgaattcac gcgaacgcgc gagaacagaa cggactgcac caccaccgaa
     4201 ccggagatca cacaaccgcc ggataccagt gagttaaggg tcatcccgtg gctaccggag
     4261 cgatcctgca cgaatttcgc tggcggtaat gattcattgt aggtgcgaat tggccaattg
     4321 cgatcgtaca tatccagttc cggcaccaca gaggccagat cgagattcgc tttccagtaa
     4381 gctttcagcg tacccacatc gcgccagtac ggctcggcat ccgggtcgga ttgtacgcaa
     4441 gagagcggga acgggtgcgc ataggccaga ccggcttcgg tgatcttggg aatcaaatct
     4501 ttgccaaagt cgtggctgga gttctcatca cgatcgtctt cttccagcag ttcatacaga
     4561 tagtcggcgt caaagacgta gatacccata ctcgccagag atttgctcgg atcgttcggc
     4621 attgacggtg ggttagcagg tttttcaacg aattcgataa ttttatcgtt ctcatcaacc
     4681 gccataacgc caaatgcgga ggcttcttca atcggtactg gcatacaagc aacggtgcaa
     4741 cgtgcgcctt tttcgacgtg atcgataagc atacgcgagt agtcttgctt gtagatatgg
     4801 tcgcccgcca ggatcaccac gtattccgct ttataacggc ggataatgtc gaggttttgg
     4861 gtgaccgcat ctgcggtgcc gcgataccag ttttcccctt tcattctctg ctgtgctggc
     4921 agcagatcga caaactcgtt catttcttca ttgaagaatg accagccgcg ctgaatgtgc
     4981 tgcaccagag tgtgggactg gtactgggtg atcacgccca tacgacggat cccggagttg
     5041 atgcagttag acagcgcaaa gtcgataatg cggaacttac cgccgaagtg tacggccggt
     5101 tttgctcgct tattggttaa atccttcagg cgggtaccac gtcctcccgc cagtatcagg
     5161 gcaacagatt tcaatggcag ctggcgcgcc aacattaagt gatcgttctt ctctaaacta
     5221 accatgacta actccttttt tatcatctct ggaacacaca caatccgtgt gcaggtccct
     5281 gccagacagc cgtaatcact gggttatcct ctccagcgaa tgggggaatg gcgtgccact
     5341 ccccagcagg taaaacaatc tctgttacct caagcgtggc gttaattgcg atcaaaaagc
     5401 gatccgagag cagaatttgc agctgtttcg gcccgttttg ccactcatcc gtgcttaaag
     5461 gttgagcata tcgatttagc caacggacat tgccatcgcc ttcttcccac cagcgattct
     5521 ccaccaaagc gggaatgcgc ttgcgcagat ggattaacgc ggcggtaaat gcggttaaac
     5581 cactgcttgc ctgcgaccag tccaaccagg ttaattggtt atcctgacag taggcattgt
     5641 tattgccatg ctggctgtga ccatgttcgt caccggccag taacatcggc gtaccctggg
     5701 agagcaacaa cgttgttaac aaggcgtgaa tactgtcgcg ccgccgttca accaggtcaa
     5761 gagaaccgcc taacccttct ttaccatgat tgttactgta attgttgttg gtcccgtcgc
     5821 gattttcttc tccgtttgct tcattgtgtt tatggttgaa gcaaacgcag tcgcgaagcg
     5881 taaaaccgtc atgcgcagtg acgagattaa tcgcggcact cggcagacga ccattacgtt
     5941 taaaaacatc gctggaggca gcaaaacgcc cggcaaacgc ccccagaggc aaatcataat
     6001 gtagccagaa acgacgggca gcatcgcgga aatgatcgtt ccactcggca aacagcggcg
     6061 ggaaatttcc cacctgataa ccaccagggg cgatatccca cggttcagca attaacttca
     6121 cctgcgagag caccgggcag ttctggatag cggtaaacaa cggcgcatcc tgacggaact
     6181 ctggcgtacg gcccatgact gccgccagat caaagcggaa accatcgacg tgacaggttt
     6241 ctacccaata acgcaggcag gcgctggcat aatccaccac cgccggatga ctcaaattga
     6301 gcgtgttgcc gcaaccggtc cagttgtgat aatcgccgtc ttctcttatc caataatagc
     6361 tacggttatc gatcccacgc agtgagaata acgggccgtc gaggtccagt tccgcactat
     6421 ggttgagcac gatatcaaga atgacttcga tacccgcttt atgcagtgct ttgattgcat
     6481 cgcgaaactc atccagcgcc gtttctggcg agcaggcata cgccggatgc agcgcaaaca
     6541 tcgccaccgg gttgtaaccc cagtagttac ttagccccat gcgttgcaga cgtggttcac
     6601 tggcaaactg cgccactggc agcagttcca gcgcggtaat gcccaattgt ttcaaatagt
     6661 tgatcatcac cggatgcccg agggctttat aagtgccacg gatctcgacc ggaatctccg
     6721 ggtgcaagta cgttaatcct ttgacatggg cttcataaat gatggtgctg ccccacggcg
     6781 tgcgcggcgg ggcatcatct tcccagtcat agtgatcaac caccactacg catttcggcg
     6841 caatggcggc gttgtcgcga tagtcaggtt cattatgacc ggcgtgcagc agcgggttat
     6901 ctttaaattc cccgtcaatt tgccgcgcgc aaggatcaat caacaacttc gccgggttaa
     6961 agcgatgccc ctcggcgggt tgccaggggc catgaacgcg ataaccataa cgcaaacccg
     7021 ggcgcgcatc cggcagataa ccgtgccaaa tgtcgccact gtgccctggc aagtcatagc
     7081 gatgttcctg gccattggcg tcaaagacac acagttctac ccgctcggca tgagcggaga
     7141 aaagtgtgaa gttgacgccc tgaccgtcgt aatgcgcgcc gaggggagcg ggtttgccaa
     7201 tggcgagttg tgtcattctg cctcccgaac cagccagata gtggccagcg gtggtagtgt
     7261 caggcttagt gaatgctgac gaccgtggct ggcaatctca tcgctgtgta ccgtgccgcc
     7321 attgcctgca ttactgccgt gatagtgcat ggaatcggta ttgaggattt cacgccattt
     7381 gcctggctga ttaatgccga agcgataatc atgacgcggc accggcgtaa agttactggc
     7441 aacgataatt tcgttaccct ctttatcgcg acgcacaaag atcagcaccg agcgttcttt
     7501 gtcatccacc accagccatt caaagccgta cgggtcaaaa tccagttcat gcattgcttt
     7561 atggtggcgg taggtgaggt tcagatcgcg caccagacgc tggacaccgt ggtgccagtt
     7621 atcgccacct tccaacagat gccagtcgag gctggcgtca tggttccact cacggccctg
     7681 ggcaaattcg ttccccatga acagcagttt cttgcccggg aatgcccaca tccagccata
     7741 gtaggcgcgc aggttagcga atttctgcca tgcgtcgccc ggcatgcggt cgagaatcga
     7801 ttttttaccg tggaccactt catcatgcga caacggcagg acgaagtttt cagtgtagtt
     7861 gtagagaatc ccgaaggtga gtttatcgtg atgatactga cgataaaccg ggtcgagctt
     7921 catgtagtcc agggtgtcat gcatccagcc gaggttccac ttgtaccaga agcccagacc
     7981 gcccatatcc tgcggacgag aaacgccagg gaaatcggta gactcctcag ccattgtcac
     8041 cgcaccggaa acctgctcac caagaatacg gttggtatta cgcaagaatt caatcgcttc
     8101 aagattctcg cgcccgccaa attcgttcgg gatccactcc ccctctttac ggctgtagtc
     8161 gcgataaatc attgacgcca ccgcatcgac gcgcagcgca tcaataccaa aacgttcaat
     8221 ccagtaaagc gcgttaccga cgaggaagtt actgacttca cggcgaccat aattgtagat
     8281 cagcgtattc cagtcctgat gatagccttc gcgcggatcg ctgtgttcat acaagttcgt
     8341 gccatcaaat tcggcaagcg caaagtcatc ggtcgggaag tggcctggca cccagtcgag
     8401 aatcacgttc agacccgctg cgtgtgcggc atcaatgaaa taacggaagt cgtcgcgagt
     8461 accaaaacgg cgggttggtg catacaggcc ggttggctga taaccccaac tgccatcgaa
     8521 gggatgctcg ttaatgggca gtagttcgag gtgggtaaag cccatccatt tagcataagg
     8581 caccagttga tcggccagct cgcggtagct caaccagaaa ttgttatcgg tgtggcgacg
     8641 ccaggagccc aggtgaactt cataaataga gattgacgca tcaaactgat tcgctttttt
     8701 gcgctcttca gtctgtacaa ccttttccgg cagcccgcaa ataagagacg cggtttccgg
     8761 gcgcatttgc gcttcgaagg cataagggtc ggacttcaga cgcaagttgc cattggcatc
     8821 aatcatctcg tatttataga gctgaccgtt atgcgcccca gggataaaca gttcccaaat
     8881 gccgctctct ttacgcagac gcatcgggtg acggcgaccg tcccagtagt tgaattgccc
     8941 aaccaccgag acccgacggg cgtttggagc ccaaacagag aaacgcgtac ctgtgacgcc
     9001 atccatagta tctgcatgcg cgcctaaggt ttcatacggg cgcaggtgag taccttcaga
     9061 taatagccag gcatccattt cctggattag cgggccaaaa cggtaaggat catcaatcag
     9121 gttttgctga ccatgccaga caacagccaa ctgatagcgg aaaaaattct tacgtcgcgg
     9181 aatgacaccg ctaaagaatc cccgtgagtc aagacactcc agttttgcga gtttgcgccc
     9241 ggttttcggt tcaatcaccc acacatcggt agcgtcgggt aaaagggcac ggacttccag
     9301 tcccgcggtg gttttatgca ttcccagtac ggaaaaagga tccgcaaaat ggcctgcaat
     9361 tagcgcgtta atcacgtctc tatcgatacg atcggacatg cttgtcttcc tgttttattg
     9421 tgtcacccca tccaattgga tttttgactt ctggttgtga catttttttg acctgaacgg
     9481 cgcagcactc tgtgcatcct ctctgcgtcg tcctcacttc aggtaaggct gtgaatactc
     9541 atgtattcag ccacccttaa agaatagcca atgctctatt taactcccgg taaatcatga
     9601 aacatctgcg cttactcctg tattacgcac taacaggggc ggcatcgcgc cccagattta
     9661 atgaataaag attacgccag ttgacgaagc atccgacgca gcggctccgc ggccccccac
     9721 agcagctggt cacccacggt aaaggctgac aggaactccg gtcccatatt cagcttacgc
     9781 aggcggccta ccggcgtggt cagcgtgccg gtaacggcag ctggggttag ctcacgcata
     9841 gtgatttccc gatcgttcgg aacgactttc gcccacggat tgtgcgcagc cagcagttct
     9901 tcgacggtcg gaatagacac atcttttttc aatttaatag tgaatgcctg gctgtggcag
     9961 cgcaatgccc cgacacgcac acataaacca tctaccggaa ttacggaaga tgtgttgagg
    10021 atcttgttgg tttccgcctg ccctttccac tcttcgcggc tctgaccgtt atcgagctgt
    10081 ttgtcgatcc acggaatcag gctacccgcc agcggcacgc caaagttatc caccggcagc
    10141 tcaccgctac gggttaaggt tgtgactttg cgttcgatat cgagaatagc agaggacggg
    10201 gtcgcgagtt catctgccac atggccatac agatggccca tctgggttaa taactcacgc
    10261 atatgtcgcg caccaccgcc ggaagcggcc tggtaggttg caacggacac ccaatcaaca
    10321 agatcattgg cgaataaacc acccaacgac atcaacatca ggcttacggt acagttaccg
    10381 ccaacaaaag tcctgatgcc attatttaat ccgtcggtaa tgacgtcctg attgacgggg
    10441 tcaagaatga tgatggcgtc atctttcatg cgcagagacg atgctgcgtc aatccagtaa
    10501 ccttgccatc cgctttcacg aagctttgga tagatttcgt tggtataatc gccgccctga
    10561 caggtcacaa tgatatcgag ggcctttagc gcctccagat caaaggcatc ctgaagtgtg
    10621 ccagtggttc cgccaaaaga cggcgcagcc tggccaagct gagaagtaga aaagaagaca
    10681 gggcgaatgg cgtcgaagtc gcgctcttca accatgcgtt gcatgagaac ggagccgacc
    10741 ataccgcgcc agccgataaa accaacattt ttcataagcg ttttttcctg caaagatgtg
    10801 tgctgtataa atgtgccggt ctcctcttgg cacatctttc accatacaaa aagcagccaa
    10861 agtcgcaagt gaaattaatc aatgatagcg aagccatcag taatgcgact tatcctgctt
    10921 tgttagcaca cagaaagtcc gcggcaatta tcagggaatt tgagttatga atgaaatcat
    10981 ttctgcagca gttttattga tcctgattat ggatccgctc ggaaacctgc ctattttcat
    11041 gtccgtactg aaacatactg aaccgaaaag acggcgggca atcatggtgc gagagttgct
    11101 tattgctctc ctggtgatgc tggtgttcct gtttgcgggt gagaaaattc tggcatttct
    11161 cagcctgcga gcagaaaccg tctccatttc tggcggcatc attctgtttc taatcgccat
    11221 taagatgatt ttccccagcg cttcaggaaa tagcagcggg cttccggcag gtgaagagcc
    11281 atttatcgtg ccgttggcaa ttccgttagt cgccgggccg actattctcg ccacgctgat
    11341 gttgttgtct catcagtacc cgaatcagat gggacatctg gtgattgctc tgctgctggc
    11401 ctggggcggc acctttgtca tcctgctaca gtcttcgcta tttttacgtc tgctgggcga
    11461 gaaaggggtg aacgcacttg aacgcctgat gggattgatt ctggtgatga tggcaaccca
    11521 gatgttcctc gacggcattc gaatgtggat gaaggggtaa cgaggagagt ttttcgaaaa
    11581 gaacccggta gcgtcacaac taccgggcga acaaacttaa ctcaacagct ggaacgcaat
    11641 catcccaacg atggcaccaa cagtgccgag gatggtttcc atcatggtcc aggttttcag
    11701 cgtttcggct tcggtcgcgc cggtaaattt accgaacaac cagaaaccgg cgtcgttaac
    11761 gtggctgaca acaatcgaac caccagcgat acaaatcgac agtgccgcca tttgcgcacc
    11821 ggagtagttc agttgttcaa tgaccggcat caccagcccc accgccgtta aacaggcaac
    11881 ggtggcagac ccctgaatga tgcgcactgc agcggccagc acgaagcagg tgatagcaat
    11941 cggcaggccc atgccggtta acgcttcgcc cagtgccgga cctacgccag agtcaaccag
    12001 cacctgtttg aacacgccgc ctgcaccaat caccagcaga atgatccccg ccggttgtag
    12061 cgcgtgaccg caaatctcca tcactttgtc ttttggcatg ccctgacgca ttgccaggcc
    12121 ataaatcgct accagacaag caaccagaat cgcggtaaat ggatgaccaa taaactcgaa
    12181 ccattcgtaa gcagttgatc cttctggcac aaaacgagcg gcaatggttt tcagccccac
    12241 cagcaccagc ggcaacagga tcagcgacag gctgaatccg aaggacggca ttttgccttc
    12301 gccgagatgc ggttcgctga tgtcgtcagg aatatgcaac tccacgtaac ggctgatgaa
    12361 attaccccac agcggcccgg caataatcat tcccggaatt gccgcacaca gaccaatcag
    12421 gatcatccag ccaaagtcgg cattcatctg cgatgccagc aacatcggcg ctggtccagg
    12481 caccagaaat gccgccgctg ccgccacgcc tgcgaataat gggattacca gcttcaccag
    12541 gttcgtaccg gtgtggcgcg ccattgagaa agcaacgcta atcagcagaa ctatcgccac
    12601 ttcaaagaac agcggtagcg cacagaccaa ccccgcaagg ccgatggcat aatgcgcgcg
    12661 gctgtgaccg aaggatttga gcattttgac ggcaatctga tcgactgcgc cggtttcatg
    12721 taagatcttg ccaaacatag ctcccagggc gacaaccacc gccaggaagc cgagggggcc
    12781 tcccatccct ttttccatcg tcgctgcgat tttatcgagc ggcataccgg aaaaaaggcc
    12841 agcccccatg gacaccacca tcaaagccag gaaagcgtgc atacgcgcct tcatgactaa
    12901 aaacagcagc agtaaaacag accctactgc tgttaaaaca agcgttaatg tagtcactac
    12961 ttatttgcct tttttaataa cctcaatggt gcttgccaca acaccttcca gcggttgatc
    13021 gatatccacc accagtacat cggtttcgtc cgcacccggc tcctgcagcg tttcaaactg
    13081 cgtcaccaac atttgggttt taaagaaatg gcctttgcgc gctttcaagc gactttcaat
    13141 cacatcaaaa tcgcctttca ggtagatgaa agagagattc ggattacctt cacgcagcaa
    13201 gtcgcgatag tgctttttca gtgcagaaca gacgatcagc gacactttat tggtgcgcag
    13261 catagcaaac gcggcgtcgt tcagcgcctg caaccagggt ttgcgatcgt cgtcattcag
    13321 cggttcgcca gacgccattt tttcgatatt gcgccgtgga tggaggaaat caccatcaag
    13381 aaacgcggca tgaagttgat gcgccacttc actggcgacc gcagatttgc cgctgcccga
    13441 tacgcccatc aagacgtaaa tgtggtgatc atggttagtc gtgctcaaag tggtgccccc
    13501 acaatacaag aattaaaaat gttacgggta actgttatcg gtaacattgt ccagccggac
    13561 aatatcagaa gcaatatcca tccgtgcctt aagtgtataa gtgtgagcta cttcaaattt
    13621 gtaggcttaa atagatccgc ccggtgacaa ggtgaaacct aaatctaaca ttttcggtgt
    13681 cacagattcg ccacgaatac gcgccagcag gcgttcagcg ccaatactgc ccatccgctc
    13741 acgcggcgtc agcacgctcg ctaaccgcgg ctccatcacc tggccaatgt catgaccgtg
    13801 gaaaccggca atcgccatat cgtcaggaac cttcaatccc agacgctgac attcaaacgc
    13861 cgcgccgacc gccaggtcat cgttggtaca gaacacgcca tccagctgcg gatattcccg
    13921 ccgcgcctgg cgaatcagtt caataccgga agagtaagaa gaagattgct caaccatcac
    13981 gctatacgac accagacctg catccagcat cgcctgttcg tatcccttct gtttgatgat
    14041 agtacgttcg tcgagacgcg cgccgagata ggcaatgtgg caatgcccgc gagcaataat
    14101 ggcggtggtc atctggcgtg ccgcttcaaa gttatcaaaa ccgacggcga tatcgaggca
    14161 cggcgactgg ctgtccatga gttccaccac cgggatcccc gccacttcaa tcatctttaa
    14221 ggtgcgcggc gtgtgggtac gttcggtgag gatcagtccg tcgatattcc atgagagcat
    14281 ggattcgaga cgttcttgct ccatttccgg tttataaccg tagtgagcca gcatggtctg
    14341 ataaccgtgc gcgtcggtga cgctttcgat tccgcgtaat acttccgcga aaacctggtt
    14401 ggtgagagaa ggtaacagga cgccaatcgc ccggctggtg gcgttagaga ggatatcggg
    14461 cgcacgattg ggaatatagc ccagttcatc aagagcggcg gcaatcttgc cgcgtagagc
    14521 gacggaaacc tgctccgggt tgcgtaaaaa acggctgacc gtcattttgg tcacgcctac
    14581 acggtcagcc acatcctgaa gtacgggtct tttctttttc atcgtcctga aggtacaaaa
    14641 gagatagatt ctcttagttt aacacggacg catcagaacc ttcccgggga aaacagtgct
    14701 tgtttacaat tattagatat acactaaatc aattgcatcg cattgtgcta acgacgcggc
    14761 aaaaccccgg aagcgtgcat cagcacgcga ccggagcgag cgaggaagcc tgcaaaaagg
    14821 caggcttcaa agatgccgtt gagttttaaa ccggcggcag atcgaacagt aacacttcgc
    14881 tgtcgctatc cgcatggatg gagattgcct gctcatccca gattgccaga ccatcgctgg
    14941 tcgaggcttt cacgccgtta atggtgacat tgcctttcac cacctggatc cagacgcggc
    15001 gttcagcggc aatctgatgc accgactgct catctttcag caacgcccag cggtacagtt
    15061 ccatatcctg atgcactttc aatgaaccat ctcgcgcatc cggcgagagc accagctgtt
    15121 tgccctgtac ggcatcgaag cgacgctgtt cataacgcgg cgtaataccg ttttcttcag
    15181 gcatgatcca gatctgatac agatgcagac gctcggtgct gcttgggttg tactctgagt
    15241 gacgaatacc cgtacccgca ctcataatct ggaactcacc cgccggaacc tgctctttat
    15301 tgcccatgct gtcctgatgc tcaacagtac cttccagcac gtaggtcaaa atttccatat
    15361 ctttatgcgg gtgagtgccg aagccctgcc ctgcttcaat cacgtcgtcg ttaatcacgc
    15421 gcagcgcgga gaagcccata aagttcggat cgtaatagtt ggcaaaagag aaagtatgcc
    15481 aggagtccag ccagccatga tttgcatgac cacgttcatt tgctttgcgt aagtagatca
    15541 tttgtattcg ccccctgaat gatttcgatg ggcttagtgt ggacccgatc tgcctgggat
    15601 gatagagggt gaaaattgcc ccctctgttc aaaaaaattg aactattcga ggggccatca
    15661 aacttaattc gcgagagtca ctgtggaggg agaggcttgc tcaaatccgc gttcaaggat
    15721 ttccagattg gtaagaactt cagattcctt gacgtaattt ggcgcaccgt gggtgatggt
    15781 ttgatacaac gcatcataaa cgcgcccgta atcgcccatc tccggcttca tctcttctct
    15841 gaccgtcacg ccctcgtcat tgacatactc cggcacaccg accgaatcat ccgctgcgaa
    15901 tcccggttcg cccggcataa tattagcctt caggctggtt tcctgctggt cgataccgta
    15961 tttaataaac gaacctttct taccgtgaac gataaatttc ggataatcga ttttcaccag
    16021 atggctggtt ttgacgatgg ctttcaggtc gccataaaac agttgcgctt caaaggtgtc
    16081 gtcaggattg gctttattac gcaggctgcg gatgtcataa gcgacgtgat ccgggcgacc
    16141 gaacagagaa ataatctggt ccatcgtatg cacaccaagg ccataaaacg cgccatcctg
    16201 cggcagccca ggtttggttt ctgccaccgg gcggtaatag tcaaaatggc tttccacttc
    16261 aacaatctct cccaacttgc cactttcaat cgcttttttc gctgtcagga agcaggagtc
    16321 aaagcgacga ttctgatacg gcgtgacgct cagccctttg cttttcgcca acgcaaacag
    16381 ctccttcgcc tgggcaagcg tcggggtgaa cggtttttcg accagcacat ttttcccggc
    16441 ttccagcgcg cgtttcgcgt actcgaaatg gctgtccgcg tgggtgcaga caacaaccag
    16501 cttaacatcg ggatcgttta gtacttcgtc gagatcgctg atgaaatgga tatgggaata
    16561 aatgggagcc tgttcttccg gcttcgcatg gcgacgaaaa atatgcgcga catgccagct
    16621 atccttgcgg ttaagtacat acggcagatg gtaacgggtg gtgcttttgc cgaagccaat
    16681 aaaggcgcag ttgatgacca tgatttcgtc ctttttaagg tggttattta caccttagcg
    16741 caaagcggac gtggttccta ctggagtgcg cataacgaac acaagcactc ccgtggataa
    16801 attgagaacg aaagatcaaa aaaaagccag cacccggctg gctaagtaat actggaagca
    16861 atgtgagcaa tgtcgtgctt tcaggttctc cgcgagggtc ttcctgatcg cgagacaata
    16921 ataatcattc tcattcgcgc ttgtccaaca ctttttgcaa aaaaatgcat ttgactcgca
    16981 tttgaaagtc aatgatgttg aaagggacat ttaccccaaa gaggacaaag gaatgagtga
    17041 gatagtaata cgccacgcag aaacacggga ttacgaggcc atcaggcaga ttcacgccca
    17101 gccggaggtg tattgcaaca cactacaggt gcctcatcct tccgatcata tgtggcagga
    17161 gcgactcgcc gatcgtcccg gcatcaagca actcgtcgcc tgtattgatg gagacgtcgt
    17221 gggccatctc accattgacg tgcaacagcg cccacgcagc agtcatgttg ccgattttgg
    17281 tatctgtgtc gactctcgtt ggaagaaccg cggcgtcgcc agcgccctga tgcgagagat
    17341 gattgaaatg tgcgacaact ggttgcgggt agatcgcatt gaactaaccg tgtttgtcga
    17401 taacgccccg gcaattaagg tctataaaaa atacggcttt gaaattgaag ggactggtaa
    17461 gaagtacgca ttgcgtaatg gtgaatatgt cgatgcatat tatatggcgc gggtgaagta
    17521 agatagtgcc ctttttctga gatggaaaaa gggtgtcatt caaaatcgac ataccttcct
    17581 ttaaggtatt tatttaccca atacatatat tgagatttaa ctcataatta attcctaaag
    17641 tgtaatattt tattttttaa tatatacgcc tacaatttcc tggagtaaat aaataacaat
    17701 taacaagcat aatattgcca ttgataaaat agcatgccat aaaaggactt ttcagggatg
    17761 agtaatattg tttacctgac agtaacggga gaacaacaag gaagcatctc cgcaggttgt
    17821 gggacttctg agtctacagg taatcgttgg cagagcgggc atgaggatga aatatttaca
    17881 ttctcactct taaataatat taataatacg gggcttggtt cacagttcca tggtataaca
    17941 ttttgtaaat taattgataa aagcactcca ttatttatta attccattaa caataatgaa
    18001 caattattta tgggatttga cttctatcga ataaatagat ttggtagatt ggaaaagtat
    18061 tattatatac aactaagagg cgctttttta tcggctattc atcaccagat cattgaaaac
    18121 caactggata cagaaacaat aactattagt tatgaattta tcctctgtca acatcttatc
    18181 gcaaataccg agttcagcta tttggcactc cctgaaaatt ataaccgatt gtttttacca
    18241 aattcaaaaa accaaacaaa taatcgtttc aaaacgttaa acagcaaagc tattggcagg
    18301 ctacttgctg ctggtggcgt atacaatggg aacattgaag gattcagaga tactgcggaa
    18361 aaactgggtg gagatgcaat aaaaggctat gatcaaatac taaatgaaaa aacagcgggc
    18421 atagcgatag caacagcatc tattctttta acaaagcgtt ctaatgttga tacatataca
    18481 gaaataaata gttacttagg caaacttaga ggtcaacaaa aacttcttga tggtatagac
    18541 ataatagaaa taatatacat taagagacct tcaaaagact tagctaactt acgaaaggag
    18601 tttaataaaa ctgtaagaaa aaattttctt atcaaacttt caaaaacctc cgaagcatct
    18661 ggaagattca acgccgaaga ccttttaaga atgagaaagg gcaatgttcc tctaaattat
    18721 aatgttcacc ataaactatc tctagatgat ggtggtacta atgatttcga aaatttagta
    18781 ttaatcgaaa acgaaccata tcataaagtt tttactaaca tgcaatcacg aatagctaag
    18841 ggaatattag taggtgaaag caaaatcact ccctgggcca ttccatctgg ctcaatttat
    18901 cctcccatga aaaatgtaat gaacgcatcc cacacaatta aacacggagc agtatgatgg
    18961 ttaaaagggt gaaactggca ggtgtggagc ctcgcagatt tccggcatca tagtgcccaa
    19021 tacgggatgc ataaagctcc ctcagactgg aaactccaca aatgaaatat acaccggttg
    19081 gcgttg
//
LOCUS       DADMIB010000076        18505 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.076, whole genome shotgun sequence.
ACCESSION   DADMIB010000076 DADMIB010000000
VERSION     DADMIB010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18505
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.076"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..893
                     /locus_tag="JNZ89_002416"
     CDS             <1..893
                     /locus_tag="JNZ89_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8936269.1"
                     /translation="WFNIKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFIT
                     IGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTM
                     WGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMTAIPFLFGAAGMLVNGYVT
                     DWLVKGGMAPIKSRKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTS
                     CRGLIHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTA
                     AGALAYIFLVRQPINDPRKD"
     gene            complement(942..2597)
                     /gene="tsr"
                     /locus_tag="JNZ89_002417"
     CDS             complement(942..2597)
                     /gene="tsr"
                     /locus_tag="JNZ89_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY8936270.1"
                     /translation="MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQ
                     TIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAE
                     KNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQ
                     DGFEKQYVAYMEQNDRLYDIAVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASL
                     VAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANA
                     IYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSAS
                     ETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQ
                     GRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVT
                     RVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVEESAAAAAALEEQASRL
                     TEAVAVFRIQQQQRETSAVVKTVTPAAPRKMAVADSEENWETF"
     gene            complement(2716..3162)
                     /gene="hpaR"
                     /locus_tag="JNZ89_002418"
     CDS             complement(2716..3162)
                     /gene="hpaR"
                     /locus_tag="JNZ89_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoprotocatechuate degradation operon regulator
                     HpaR"
                     /protein_id="HAY8936271.1"
                     /translation="MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESP
                     SMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRA
                     QTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEAIPGDNE"
     gene            3434..4723
                     /locus_tag="JNZ89_002419"
     CDS             3434..4723
                     /locus_tag="JNZ89_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate degradation bifunctional
                     isomerase/decarboxylase"
                     /protein_id="HAY8936272.1"
                     /translation="MKGTIFAVALNHRSQLDAWQEAFQQSPYKAPPKTAVWFIKPRNT
                     VIGCGEPIPFPQGEKVLSGATVALIVGKTATKVREEDAAEYIAGYALANDVSLPEESF
                     YRPAIKAKCRDGFCPIGETVALSNVDNLTIYTEINGRPADHWNTADLQRNAAQLLSAL
                     SEFATLNPGDAILLGTPQARVEIQPGDRVRVLAEGFPPLENPVVDEREVTTRKSFPTQ
                     PHPHGTLFALGLNYADHASELEFKPPEEPLVFLKAPNTLTGDNQTSVRPNNIEYMHYE
                     AELVVVIGKQARNVSEADAMDYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDGLTPML
                     STIVPKEAIPDPHNLTLRTFVNGELRQQGTTADLIFSVPFLIAYLSEFMTLNPGDMIA
                     TGTPKGLSDVVPGDEVVVEVEGVGRLVNRIVSEDTAK"
     gene            4720..6186
                     /gene="hpaE"
                     /locus_tag="JNZ89_002420"
     CDS             4720..6186
                     /gene="hpaE"
                     /locus_tag="JNZ89_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate semialdehyde
                     dehydrogenase"
                     /protein_id="HAY8936273.1"
                     /translation="MKKVNHWINGKNVAGNDYFQTTNPATGEVLADVASGGEAEINQA
                     VAAAKEAFPKWANLPMKERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIP
                     RASHNFEFFAEVCQQMNGKTYPVDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAP
                     CLALGNTAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQGYGATAGDALVRDHDVR
                     AVSFTGGTATGRNIMKNAGLKKYSMELGGKSPVLIFEDADIERALDAALFTIFSINGE
                     RCTAGSRIFIQQSIYPEFVKRFAERANRLRVGDPNDPNTQVGALISQQHWEKVSGYIR
                     LGIEEGATLLAGGPDKPSDLPAHLKGGNFLRPTVLADVDNRMRVAQEEIFGPVACLLP
                     FKDEAEGLRLANDVEYGLASYIWTQDVSKVLRLARGIEAGMVFVNTQNVRDLRQPFGG
                     VKASGTGREGGEYSFEVFAEMKNVCISMGDHPIPKWGV"
     gene            6188..7039
                     /gene="hpaD"
                     /locus_tag="JNZ89_002421"
     CDS             6188..7039
                     /gene="hpaD"
                     /locus_tag="JNZ89_002421"
                     /EC_number="1.13.11.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
                     /protein_id="HAY8936274.1"
                     /translation="MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCR
                     EMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLI
                     ADEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKL
                     GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWRE
                     GQFKEFCNMLPEYADYCYGEGNMHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVN
                     AVFPLPA"
     gene            7049..7429
                     /locus_tag="JNZ89_002422"
     CDS             7049..7429
                     /locus_tag="JNZ89_002422"
                     /EC_number="5.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HAY8936275.1"
                     /translation="MPHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRV
                     HWVDTWQMADGQRDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLA
                     LSFEIEELHPTLNFKQNNVHALFK"
     gene            7540..8343
                     /gene="hpaH"
                     /locus_tag="JNZ89_002423"
     CDS             7540..8343
                     /gene="hpaH"
                     /locus_tag="JNZ89_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HAY8936276.1"
                     /translation="MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQR
                     EWVRLKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIV
                     PRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD
                     TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWL
                     ANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGSISCRFV"
     gene            8354..9142
                     /gene="hpaI"
                     /locus_tag="JNZ89_002424"
     CDS             8354..9142
                     /gene="hpaI"
                     /locus_tag="JNZ89_002424"
                     /EC_number="4.1.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxoheptanedioate aldolase"
                     /protein_id="HAY8936277.1"
                     /translation="MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLIDGE
                     HAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAR
                     EAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQI
                     LDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIANEQL
                     AKRYLELGALFVAVGVDTTLLARAAEALAARFGAQATAVKPGVY"
     gene            9317..10693
                     /gene="hpaX"
                     /locus_tag="JNZ89_002425"
     CDS             9317..10693
                     /gene="hpaX"
                     /locus_tag="JNZ89_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate permease"
                     /protein_id="HAY8936278.1"
                     /translation="MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLF
                     IFSFLDRINIGFAGLTMGRDLGLSATMFGLATTLFYAAYVIFGIPSNIMLSIVGARRW
                     IATIMVLWGIASTATMFATGPTSLYVLRILVGITEAGFLPGILLYLTFWFPAYFRARA
                     NALFMVAMPVTTALGSIVSGYILSLDGVMALKGWQWLFLLEGFPSVLLGVMVWFWLDD
                     SPDKAKWLTKEDKKCLQEMMDNDRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTL
                     AYFCLTNTLSAISIWTPQILQSFNQGSSNITIGLLAAVPQICTILGMVYWSRHSDRRQ
                     ERRHHTALPYLFAAAGWLLASATDHNMIQMLGIIMASTGSFSAMAIFWTTPDQSISLR
                     ARAIGIAVINATGNIGSALSPFMIGWLKDLTGSFNSGLWFVAALLVIGAGIIWAIPMQ
                     SSRPRATP"
     gene            10703..11589
                     /gene="hpaA"
                     /locus_tag="JNZ89_002426"
                     /pseudo
     CDS             10703..11589
                     /gene="hpaA"
                     /locus_tag="JNZ89_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA"
     gene            11840..13402
                     /gene="hpaB"
                     /locus_tag="JNZ89_002427"
     CDS             11840..13402
                     /gene="hpaB"
                     /locus_tag="JNZ89_002427"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HAY8936279.1"
                     /translation="MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPA
                     FRNAAASVAQLYDALHKPEMQDSLCWNTDTGSGGYTHKFFRVAKSANDLRQQRDAIAE
                     WSRLSYGWMGRTPDYKAAFGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNP
                     PIDRHLPTDKVKDVYIKLEKETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENP
                     DFALMFVAPMDADGVKLISRASYEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPW
                     ENVLIYRDFDRCRRWTMEGGFARMYPLQACVRLAVKLDFITALLKKSLECTGTLEFRG
                     VQADLGEVVAWRNTFWALSDSMCSEATPWVNGAYLPDHAALQTYRVLAPMAYAKIKNI
                     IERNVTSGLIYLPSSARDLNNPQIDQYLAKYVRGSNGMDHVQHIKILKLMWDAIGSEF
                     GGRHELYEINYSGSQDEIRLQCLRQAQSSGNMDKMMAMVDRCLSEYDQNGWTVPHLHN
                     NDDINMLDKLLK"
     gene            13420..13932
                     /locus_tag="JNZ89_002428"
     CDS             13420..13932
                     /locus_tag="JNZ89_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase reductase
                     subunit"
                     /protein_id="HAY8936280.1"
                     /translation="MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVT
                     DTPPSLMVCINANSAMNPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSC
                     WQKGPLAQPVLKGSLASLEGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFH
                     PVMLEMEAAI"
     gene            14325..16475
                     /gene="btsT"
                     /locus_tag="JNZ89_002429"
     CDS             14325..16475
                     /gene="btsT"
                     /locus_tag="JNZ89_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313340.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate/proton symporter BtsT"
                     /protein_id="HAY8936281.1"
                     /translation="MDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASV
                     SVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAG
                     PLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPV
                     PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPG
                     RVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWL
                     ILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFIT
                     IACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLY
                     FAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQT
                     AKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAG
                     TRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLW
                     PLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVPAVWLLICTTWALGLKLFSTNP
                     QMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYG
                     FKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH"
     gene            16606..16809
                     /locus_tag="JNZ89_002430"
     CDS             16606..16809
                     /locus_tag="JNZ89_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HAY8936282.1"
                     /translation="MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSY
                     EEFFRERQNARYGGDGKGGMRCC"
     gene            16820..17776
                     /gene="yjiA"
                     /locus_tag="JNZ89_002431"
     CDS             16820..17776
                     /gene="yjiA"
                     /locus_tag="JNZ89_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313338.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HAY8936283.1"
                     /translation="MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS
                     VDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMA
                     DPGPIIQTFFSHEILCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKT
                     DVAGEAEKLRERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIA
                     DKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
                     QRLYSADWDRPWGDEKPHSTMVFIGIQLPEDEIRAAFAGLKK"
     gene            complement(17878..>18505)
                     /locus_tag="JNZ89_002432"
     CDS             complement(17878..>18505)
                     /locus_tag="JNZ89_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase"
                     /protein_id="HAY8936284.1"
                     /translation="PGSAILNVWLTSMLKRTVVAAVPMPFDKWYSASGYETTQDGPTG
                     SLNISVGAKILYEAVQGDKSPIPQAVDLFAGKPQQEVVLAALEDTWETLSKRYGNNVS
                     NWKTPAMALTFRANNFFDVPQAAAEETRHQAEYQNRGTENDMIVFSPTTSDRPVLAWD
                     VVAPGQSGFIAPDGTVDQHYEDQLKMYENFGRKSLWLTKQDVEAHKES"
BASE COUNT         4226 a         5125 c         4937 g         4217 t
ORIGIN      
        1 actggttcaa catcaaagag cgcggacgcc cgatgggctt cttcaacgca gcttctacca
       61 ttggcgttgc cgtaagccca ccgattctgg cggcgatgat gctggtgatg ggctggcgcg
      121 ggatgtttat taccattggt gtactgggga tttttctcgc catcggctgg tatatgctct
      181 atcgcaaccg cgagcacgta gaactgactg ccgttgagca agcttatctc aatgcaggta
      241 gcgtcaatgc ccgccgagat ccgctcagtt ttgccgaatg gcgcagcctg ttccgtaacc
      301 gtacaatgtg gggaatgatg ctcggattca gtggcatcaa ctacactgcg tggctgtatc
      361 tggcctggct tcctggttac ctgcaaacag cctataacct ggatttaaaa agcacagggt
      421 tgatgacggc tatccctttc ctgtttgggg ctgccgggat gctggtcaac ggttacgtta
      481 ccgactggct ggtcaaaggg ggaatggctc cgattaaaag ccgtaagatc tgcattattg
      541 ccgggatgtt ctgttctgcc gcctttacgc tgatagtacc acaagcgaca acatccatga
      601 cggcggttct gctgattggc atggcactgt tctgtattca ctttgccgga acatcctgcc
      661 ggggcttgat ccacgtcgca gttgcttctc gcatgactgc gtcggtgggc agtatccaga
      721 actttgccag cttcatctgc gcctcttttg cgccgatcat tactggtttt attgttgata
      781 ccacccactc attccgtctg gcactaatca tctgcggttg cgtcaccgca gcgggggcac
      841 tggcgtacat cttcctggtt cgtcagccga tcaacgaccc acgtaaagat taatctcctt
      901 atgcccgata acattttgct tatcgggcat tttcatggcg attaaaatgt ttcccagttc
      961 tcctcgctat ctgccacggc cattttacgc ggcgcagctg gcgtcacggt ttttaccaca
     1021 gccgatgttt cacgctgctg ttgctgaatc cggaacactg ccactgcttc ggtcaggcga
     1081 ctggcctgct cttccagcgc ggcggcggca gcggcagact cttccaccag cgcggcgttc
     1141 tgttgagtta cccggtccat ctcagcaacc gctaagccaa cctgatcgat accacggctc
     1201 tgctcatcag aagcagaagc aatttcgccc ataatgtccg tcacgcgggt cacggcgctg
     1261 acaatctccg ccattgtttc cccggcgctt tcgaccagcg tagagccaac atccactttc
     1321 cccaccgagt cttcaatcag gcttttaatt tcacgagccg cctgggcgct gcgctgggcc
     1381 agattacgca cttctcccgc gaccaccgca aaaccgcgcc cttgctcacc cgcacgcgca
     1441 gcctcaaccg ccgcgttcaa agccagaata ttggtctgga aggcaatgcc gtcaattacg
     1501 ctgataatat cggcgatttt ctgcgaactg gtggagatat cgcgcatagt ctgcaccacg
     1561 ttatctacca ctttgccgcc gcgttgcgcc gtttcagaag cacttaacgc cagatggctg
     1621 gcctggcgcg cattttcggc gttctgcttc accgttgcgg tcagttgctc catgctggct
     1681 gccgtctctt ccagcgaagc ggcctgttgc tcggtgcgcg aagagagatc gttattgccg
     1741 gtggcgattt cgctggcacc gctatagatg gcattggccc cgttgcgcac atcaccgacg
     1801 gtacgcatca gctctccctg catatggcgc aaactctctg ccagttgccc catctcatta
     1861 gagccatcca cctcaatcgg tttcaccaga tcgccgcctg caatatgacg aatgctgtca
     1921 atcaggcgat tcattggcgc taccagcgag gctttaatac cgaaccagac ggcgaagatg
     1981 accgccagta cgacgatcat cacacccacc agaatccaca tcgcctggct gtaggaggca
     2041 ttgttatcgc tgacggcgat atcatagagc cgatcgtttt gctccatgta agccacatac
     2101 tgcttctcga aaccgtcctg atatccctgg gtcggctgat caaagaactc gttgattttg
     2161 cctgcaccta acagttggat cagctccgcc agcgcattgt gataaatatc gtaattacgt
     2221 ttgatctctg ccgctgcggc ggtgctctga cgcgggtcac gcggcaacgc ttcgtaatcc
     2281 gcccagtttt tttccgcctg tttcagcgaa atactggcac tctgcatcag ctcagcaacg
     2341 gttgaaccgc taccaatatt attctgatcc atcatgtagc ggatacccgc gcggttgagg
     2401 gtgttacgcg tctgcaacaa cgcgacccag ctgccattca gcgtggattg ctgctggcga
     2461 atggtttgta aaacagtgaa attttctttg tcattcttta aggcattaaa gaacagaccg
     2521 cctgatgtca gttgtaaaag gccaaaaacg gccaaaacca gcagtaagct ggtcacgatc
     2581 ttgatacgtt ttaacatggt ttctctttcc tgtggaccga tgcaagattt tcggcctgga
     2641 aagcaaaaac tttatgaaaa ggtgtaaccc gccatccatg gaaaaaccag gcgctggtta
     2701 tcagatacta aaaagttatt cattatcgcc cgggatggct tcttgtcggg aattgcccag
     2761 agcaataaat tcctctaaca gatgggttaa ctgttgcatt ttctcggcag taaactgagc
     2821 ttcaatctgc cgataggctt cttcaatctg tgtctgagcg cggttataca gcgcctgccc
     2881 ctctttggtt agcgagatat agagcttccg ctgatcattg atcggcttta atcgcaacac
     2941 taaaccgtcg cgttccatcc gcgtgagaat cccggtcagg cttgggcgca aaatgcaggc
     3001 gcgatacgcc agatcgtgaa aatccattga tgggctttcc gccagaatac gcacgatgcg
     3061 ccactgttgc tcagtcaaat tatgccgttt aacgattggg cgaaaataac tcatcgccgc
     3121 ttctcgcgcc tggagcaacg caatggttag tgagtcgtgc attatctttc ccctgaaaaa
     3181 ttcaaaatca ttaatataga aacagttaat cgtcacgtta ccgggactgc gctgcccctg
     3241 caattcctga ttttatcaaa attgatgata ttttattaac ttactgatat ttaatatttt
     3301 attatcttta aatgtaaata gtttgttaat tagttcacat ttacatcact tacttttgcc
     3361 aaactacgca atcgggaata aaagcaatca ttaacatatt aatgattaag ataatcgaat
     3421 ccgaggagtg gtaatgaaag gcactatctt cgccgtagcg ttgaaccatc gcagccaact
     3481 tgatgcatgg caggaagcgt tccagcaatc cccctacaaa gccccgccta aaactgcggt
     3541 ctggtttatt aaaccgcgca atacggtgat tggttgcggt gaaccgattc cctttccaca
     3601 gggtgaaaag gtactgagcg gtgcgactgt tgcgctgatt gtgggaaaaa cggcgacgaa
     3661 agtacgtgaa gaagatgcgg cagagtacat cgccggatat gcgctggcta acgacgtcag
     3721 cctgccggaa gagagctttt accgcccggc aatcaaagca aaatgtcgtg atggattctg
     3781 ccccattggc gaaaccgtgg ctctcagcaa tgtcgataat ctgaccatct ataccgagat
     3841 caacgggcgt cctgccgatc actggaatac cgccgattta caacgtaacg ccgcgcagtt
     3901 gctgagcgcc ctgagcgaat ttgccacgct gaatccaggc gacgccattc tgctcggcac
     3961 gccacaggcg cgcgtggaaa tacagccagg cgatcgcgtt cgtgttctcg cagaaggttt
     4021 cccgccgctg gaaaatccgg tagtggacga acgtgaagtg accacgcgca agagcttccc
     4081 aacgcagcca cacccgcacg gcacgctgtt tgccctcggc ctgaactacg ccgaccacgc
     4141 cagcgaactg gaatttaagc caccggaaga accgctggta ttcctgaaag cgccaaatac
     4201 cctcactggc gataaccaga cctccgtgcg tccaaacaat attgaataca tgcactatga
     4261 agcggagctg gtggtagtta ttggcaaaca ggcgcgtaac gtcagcgaag ccgatgccat
     4321 ggattatgtc gcgggctaca ccgtgtgtaa cgactacgcc attcgtgact atctggaaaa
     4381 ctactaccgc cctaacctgc gggtaaaaag ccgcgacgga ctgacgccga tgctttcaac
     4441 catcgtgccg aaagaggcga tcccggaccc gcataatctg acccttcgca ccttcgtcaa
     4501 cggcgagtta cgccagcaag gcaccaccgc cgatctgatc ttcagcgtgc ccttcctgat
     4561 cgcctactta agtgaattta tgaccctgaa tccgggcgac atgatcgcca ccggcacacc
     4621 caaaggctta tctgacgtgg tgcctggcga tgaagtagtg gtggaagtag aaggcgtggg
     4681 ccgcctggtg aaccgaattg tgagtgagga tacagcgaaa tgaaaaaagt aaatcattgg
     4741 atcaacggca aaaatgttgc aggtaacgac tacttccaga ccaccaatcc ggcaacgggt
     4801 gaagtgctgg cggatgtggc ctctggcggt gaagcggaga tcaatcaggc ggtagcggca
     4861 gcgaaagagg cgttcccgaa atgggccaat ctgccgatga aagagcgtgc gcgcctgatg
     4921 cgccgtctgg gcgatctgat cgaccagaac gtgccagaga tcgccgcgat ggaaaccgcg
     4981 gacaccggcc tgccgatcca tcagaccaaa aatgtgttga tcccacgcgc ttcccacaac
     5041 tttgaatttt tcgcggaagt ctgccagcag atgaacggca agacctatcc ggttgacgac
     5101 aagatgctca actacacgct ggtgcagccg gtgggcgttt gtgcgctggt atcgccgtgg
     5161 aacgtaccgt ttatgaccgc cacatggaag gtcgcgccgt gtctggcgct gggcaatacc
     5221 gcggtactga aaatgtcgga actctccccg ctgaccgctg accgcctggg tgagctggcg
     5281 ctggaagccg gtattccggc aggcgtgctg aacgtggtac agggctacgg cgcaaccgca
     5341 ggggatgcgc tggttcgtga tcatgacgta cgtgccgtgt cgttcaccgg cggtacggcc
     5401 accgggcgca acatcatgaa aaacgccggg ctgaaaaaat actccatgga actgggcggt
     5461 aaatcgccgg tgctgatttt tgaagatgcc gatattgaac gcgcgctgga cgccgccctg
     5521 ttcaccatct tctcgatcaa cggcgaacgc tgcaccgccg gttcacgcat ctttattcag
     5581 caaagcatct acccggaatt cgttaaacgc tttgccgaac gcgccaaccg tctgcgcgtg
     5641 ggcgatccga acgatccgaa tacccaggtt ggcgcgctta tcagccagca gcactgggaa
     5701 aaagtctccg gctatatccg tctcggcatt gaagaaggcg ccaccctgct ggcgggcggc
     5761 ccggataaac cgtctgacct gcctgcacac ctgaaaggcg gcaacttcct gcgcccaacg
     5821 gtgctggcag acgttgataa ccgtatgcga gtcgcccaag aagagatttt cgggccggtc
     5881 gcctgcctgc tgccgtttaa agacgaagct gaaggcttac gcctggcaaa cgacgtggag
     5941 tacggcctcg cgtcgtacat ctggacacag gatgtcagca aagtgttacg cctggcgcgt
     6001 ggcattgaag ctggcatggt gttcgtcaac acccagaacg tgcgtgacct gcgccagcca
     6061 tttggcggcg taaaagcctc cggcaccggg cgtgaaggcg gtgagtacag cttcgaagtg
     6121 ttcgcggaaa tgaagaacgt ctgcatttcc atgggcgacc atccaattcc gaaatgggga
     6181 gtctgatatg ggtaagttag cgttagccgc caagatcacg cacgtaccgt cgatgtatct
     6241 ctctgaactg ccagggaaaa accacggttg ccgccagggc gcgatcgacg ggcataaaga
     6301 gatcagcaag cgttgccggg aaatgggcgt cgataccatt atcgttttcg atacccactg
     6361 gctggtcaac agtgcttatc acatcaactg tgcagaccat tttgaaggcg tctacaccag
     6421 caacgagctg ccgcatttta tccgcgatat gacctacaac tacgagggca acccggagtt
     6481 ggggcagctt attgccgatg aagccttaaa gctcggcgtg cgggcaaaag cgcacaacat
     6541 tcccagcctg aaactggaat acggcacgct ggtgccgatg cgctacatga atgaagacaa
     6601 gcacttcaaa gtggtctcca tttcggcttt ctgcacggtt cacgattttg ccgacagccg
     6661 caagctgggc gaagcgattc tgaaagcgat cgaacagtac gacggcaccg tggcggtcct
     6721 tgccagcggt tcgttatcgc accgctttat tgacgatcag cgtgcagaag aagggatgaa
     6781 cagctacacc cgcgagttcg accgccagat ggacgagcgc gtggtgaagt tgtggcgcga
     6841 aggccagttc aaagagttct gcaatatgct gccggagtac gccgactact gctacggcga
     6901 aggcaatatg cacgacacgg tgatgctgct ggggatgctc ggctgggata aatacgacgg
     6961 caaggtggag tttatcaccg agctattccc aagctctggc accggtcagg ttaacgctgt
     7021 tttcccgctt cccgcgtaag gacgttttat gccgcacttt atcgttgaat gcagtgacaa
     7081 catccgcgaa gaagccgacc tgccggggtt gttcgccaaa gtgaatccga cgctggcagc
     7141 cacgggtatt tttccgctgg cgggtattcg cagccgcgtg cattgggtcg atacctggca
     7201 gatggccgac gggcagcgtg attatgcctt cgtgcatatg acgttgaaaa tcggcgcagg
     7261 tcgcagcctg gaaagccgtc agcaggcggg tgaaatgctg tttgaactga ttaaaacgca
     7321 cttcgccgcc ctgatggaga gccgcctgct ggcgttgtcg tttgagattg aagagctgca
     7381 tccgacgctg aattttaaac aaaacaacgt gcacgcattg tttaagtagc gcgcagattg
     7441 cccggtggcg ctgcgcttac cgggcctaca aaaccccaaa ccgtacaccg taggccggat
     7501 aaggcgcagc cgcatccggc aatgccacag gatatcgcta tgttcgataa acacacccac
     7561 accctgatcg cccagcgtct ggatcaggca gaaaaacagc gcgaacagat ccgcgcgatc
     7621 tcgctggatt acccagagat caccatcgaa gacgcttacg cggtgcagcg cgaatgggtt
     7681 cgcctgaaaa tcgccgaagg ccgtacgctg aaaggccaca aaatcggtct gacctcaaaa
     7741 gcaatgcagg ccagctcgca gatcagcgaa ccagattacg gtgccctgct ggatgacatg
     7801 ttcttccacg atggcagcga tatcccgacc gatcgcttta tcgtgccgcg cattgaagtg
     7861 gagctggctt tcgtgctggc aaaaccgctg cgtgggccaa actgcacgct gttcgacgtc
     7921 tacaacgcca cggactacgt gatcccggcg ctggagctga tcgacgctcg ctgccacaac
     7981 atcgatccgg aaacccagcg cccgcgcaaa gtgttcgaca ccatttctga taacgccgcc
     8041 aacgccgggg tgatcctcgg tggtcgtccg atcaaaccag acgaactgga tctgcgttgg
     8101 atctccgccc tgatgtatcg caatggcgtg attgaagaaa ccggcgtcgc cgctggcgtg
     8161 ctgaatcatc cggcaaacgg cgtggcctgg ctggcgaaca aactcgcacc gtatgacgta
     8221 caactggaag ccgggcaaat cattctcggt ggttcgttca cccgcccggt tccggcgcgt
     8281 aagggcgaca ccttccacgt cgattacggc aacatgggtt ccattagctg ccgctttgtt
     8341 taaggagaga acgatggaaa acagctttaa agcggcgctg aaagcaggcc gtccgcagat
     8401 cggattatgg ctggggctga gtagcagcta cagcgcagag ttactggccg gagcaggatt
     8461 cgactggttg ttgatcgacg gtgagcacgc gccgaataac gtgcaaaccg tgctcaccca
     8521 gctacaggcg attgcgccct accccagcca gccggtagta cgtccgtcgt ggaacgatcc
     8581 ggtgcaaatc aaacaactgc tggacgtcgg cacacaaacc ttgctggtgc cgatggtaca
     8641 aaacgctgac gaagcccgtg aagcggtacg cgccacccgt tatccccccg ccggtattcg
     8701 cggtgtgggc agtgcgctgg cccgcgcctc gcgctggaat cgtattcctg attacctgca
     8761 aaaagccaac gatcaaatgt gcgtgctggt gcagatcgaa acgcgtgagg caatgaagaa
     8821 cttaccgcag attctggacg tggaaggcgt cgacggcgtg tttatcggcc cggcggatct
     8881 gagcgccgat atgggttatg ccggtaatcc gcagcacccg gaagtacagg ccgccattga
     8941 gcaggcgatc gtgcagatcc gtgaatcggg caaagcgccg gggatcctga tcgccaatga
     9001 gcaactggca aaacgctatc tggaactggg cgcgctgttt gtcgccgtcg gcgttgacac
     9061 caccctgctc gcccgcgccg ctgaagcgct ggcagcacgg tttggtgcgc aggccaccgc
     9121 cgtgaagccc ggcgtgtatt aatgccggat gcgctgcact tatccggcct acactcgcac
     9181 caaaccgtag gccggataag gcgtttacgc cgcatccggc aaaaagccgt accaaatcgc
     9241 ggaccggata aggcgttacg ccgcatccgc cataaacctt gtcgtaccct acaaaaatcc
     9301 cattagagga agaaaaatga gcgacacctc acctgccata ccggagagta tcgatccggc
     9361 gaatcagcat aaagcgctga ctgccggaca acaggcggtt attaagaagc tatttcgccg
     9421 cctgatcgtc tttctgttcg tgctgtttat cttctcgttc cttgatcgca tcaacatcgg
     9481 ctttgccgga ctcacgatgg gacgcgacct cggtctgagc gccaccatgt ttggcctcgc
     9541 taccaccctg ttctatgccg cttatgtcat cttcggcatt cccagcaaca ttatgctgag
     9601 tattgtcggt gcgcggcgct ggatcgccac catcatggtg ctctggggca tcgcctctac
     9661 tgccaccatg tttgccactg gccccaccag cttgtacgta ctgcgtatac tggttggcat
     9721 taccgaagcc ggctttctgc ctggtattct gctgtattta accttctggt ttccggccta
     9781 tttccgcgcc cgtgccaacg ccttgtttat ggtagcaatg ccggtaacga cagcgttggg
     9841 ctcgatcgtt tccggctaca ttttgtcgct ggatggcgtc atggcattaa aaggctggca
     9901 gtggctgttt ttgctggaag gcttcccgtc ggtattactc ggcgtcatgg tgtggttctg
     9961 gcttgatgac tcaccggaca aagctaagtg gctgacgaaa gaagacaaaa aatgcctgca
    10021 agagatgatg gataacgatc gtctgacgct ggttcagcca gagggagcca tcagccacca
    10081 cgccatgcaa caacgcagta tgtggcggga gatcttcact ccggtggtga tgatgtatac
    10141 cctggcgtat ttctgcctga ccaacacact tagtgcgatc agcatctgga caccgcagat
    10201 cctgcaaagt tttaatcagg gcagcagtaa tatcaccatc ggcctgctgg ccgccgtacc
    10261 gcagatttgt accattctcg ggatggtcta ctggagccgt cactcagatc gccgccagga
    10321 acgaaggcat cacaccgccc ttccttattt gttcgctgcc gcaggttggt tactggcttc
    10381 ggcaactgat cacaacatga tccagatgct ggggatcatt atggcttcga ccggatcatt
    10441 cagcgcaatg gcgattttct ggacaacacc ggatcagtcc atcagcctgc gggcacgagc
    10501 gatcggtatt gcggtgatca acgccactgg caacattggt tcagcgttaa gtccgtttat
    10561 gatcggctgg ttgaaagatt tgaccggcag ctttaacagt ggattgtggt ttgttgccgc
    10621 gctgctggtg attggtgcgg ggattatctg ggcgattcca atgcagtcct cccgtccgcg
    10681 agcgaccccg taaggaacga cgatgtgtga ccgtcagatt gccaatattg atatcagcaa
    10741 agagtacgat gaaagcctgg gcacggacga tgtgcattat cagtcgttcg cccgcatggc
    10801 ggcatttttt ggccgccata tgctgccaca tcgccacgaa cagtactttc agatgcattt
    10861 cctcaatagc ggacagattg agctacagct tgacgatcat cgctactcgg tggaagcgcc
    10921 cctgtttgtc ctgacgccgc cgtcagtacc tcatgcgttt attacggagt ctgacgccga
    10981 cggtcatgtg ttgacggtac gggaagatct gatctggccc ctgctggaag ttctttatcc
    11041 gggcactcgg gaaaccttcg gcctgccggg ggcctgtcac tggcagataa acccgacgaa
    11101 ctggcggcgc tggaacacta ttggcaactg atagagcggg aatcggtgga acaactgcct
    11161 ggacgggaac acaccctgac gttactggca caggcagtgt tcaccctact gctgcgtaac
    11221 gcaaaactcg acgaccatgc cgccagcggg atgcgcggag aattaaaact gttccagcgt
    11281 tttaatatgc tgattgaaag ccattttcat cagcactgga cagtaccgga ttacgctaac
    11341 gaactgcata tcaccgaatc acgactcacg gacatctgcc gtcgctttgc caaccgtccg
    11401 ccaaaacggt tgattttcga caggcagctg cgagaagcca agcggctgct gctgttttct
    11461 gataacgccg tgaacaatat tgcctggcaa ctcggtttta aggatccggc ttattttgcg
    11521 cgctttttta atcgcttagt cggttgctcg cccagtgctt atcgcgccaa aaaagtacct
    11581 gtgacgtgaa aatcccttag ccttaacggg aaaccaggca ccacctgcta ttcccctttc
    11641 tccgcctgga gcaaggggat ttagtaacgt caaaaatcgc taaaagcgac ctcgatcaca
    11701 aaaccgtacc cgacctgaaa agtaccagcc attgtcccaa aagtctcttc ccgtaatcgc
    11761 ccctgcaagc tttaattgaa taacaaaaac aacacacaaa attaacaatc gtattccgat
    11821 taatactgta gaggtcgaca tgaaaccaga agatttccgc gccagtaccc aacgtccgtt
    11881 caccggggaa gagtatctga aaagcctgca ggatggtcgc gagatctata tctatggcga
    11941 gcgagtgaaa gacgtcacta ctcatccggc atttcgtaat gcggcagcgt ctgttgccca
    12001 actgtacgac gcgctacaca aaccggagat gcaggactct ctgtgctgga acaccgacac
    12061 cggcagcggc ggctataccc ataaattctt ccgcgtggcg aaaagtgcca acgacctgcg
    12121 ccagcaacgc gatgccatcg ctgagtggtc acgcctgagc tatggctgga tgggccgtac
    12181 cccagactac aaagctgctt tcggttgcgc actgggcgcg aatccgggct tttacggtca
    12241 gttcgagcag aacgcccgta actggtacac ccgtattcag gaaactggcc tctactttaa
    12301 ccacgcgatt gttaacccac cgatcgatcg tcatttgccg accgataaag taaaagacgt
    12361 ttacatcaag ctggaaaaag agactgacgc cgggattatc gtcagcggtg cgaaagtggt
    12421 tgccaccaac tcggcgctga ctcactacaa catgattggc ttcggctcgg cacaagtgat
    12481 gggcgaaaac ccggacttcg cactgatgtt cgttgcgcca atggatgccg atggcgtaaa
    12541 attaatctct cgcgcctctt atgagatggt cgcgggtgct accggctcgc catacgacta
    12601 cccgctctcc agccgcttcg atgagaacga tgcgattctg gtgatggata acgtgctgat
    12661 cccatgggaa aacgtactga tctaccgcga tttcgatcgc tgccgtcgct ggacaatgga
    12721 aggcggtttt gcccgtatgt atccgctgca agcctgtgtg cgcctggcag tgaaattaga
    12781 cttcattaca gcactgctga aaaaatcact cgaatgtacc ggcaccctgg agttccgtgg
    12841 tgtacaggcc gatctcggtg aagtggtggc gtggcgcaac accttctggg cattgagtga
    12901 ctcgatgtgt tctgaagcga cgccgtgggt caacggggct tatttaccgg atcatgccgc
    12961 actgcaaacc tatcgcgtac tggcaccaat ggcctacgcg aagatcaaaa acattatcga
    13021 acgcaacgtt accagtggcc tgatctatct cccttccagt gcccgtgacc tgaacaatcc
    13081 gcagatcgac cagtatctgg cgaagtatgt gcgcggttcg aatggtatgg atcacgtcca
    13141 gcacatcaag atcctcaaac tgatgtggga cgccattggc agcgagtttg gtggtcgcca
    13201 cgaactgtat gaaatcaact actccggtag ccaggatgag attcgcctgc agtgtctgcg
    13261 ccaggcacaa agctccggca atatggacaa gatgatggcg atggttgatc gctgcctgtc
    13321 ggaatacgac cagaacggct ggactgtgcc gcacttgcac aacaacgacg atatcaacat
    13381 gctggataag ctgctgaaat aacgcagcag gaggttaaga tgcaattaga tgaacagcgc
    13441 ctgcgctttc gtgacgcgat ggccagcctg tcggcagcgg taaatattat caccaccgag
    13501 ggcgacgccg gacaatgcgg gattacggca acggccgtct gctcggtcac ggatacacca
    13561 ccatcgctga tggtgtgcat taacgccaac agtgcgatga acccggtttt tcagggcaac
    13621 ggtaagttgt gcgtcaacgt cctcaaccat gagcaggaac tgatggcacg ccacttcgcg
    13681 ggcatgacag gcatggcgat ggaagagcgt tttagcctct catgctggca aaaaggtccg
    13741 ctggcgcagc cggtgctgaa aggttcgctg gccagtcttg aaggtgagat ccgcgatgtg
    13801 caggcaattg gcacacatct ggtgtatctg gtggagatta aaaacatcat cctcagtgca
    13861 gaaggtcacg gacttatcta ctttaaacgc cgtttccatc cagtgatgct ggaaatggaa
    13921 gctgcgattt aagctccagc cccttcacgt attcgtcgaa ggggcatttt tattgtgatc
    13981 tcaatcacat atccacccga tgaataattc ttgcccaacc gctcaccgcc attcctgacc
    14041 gcttacgtcc ctaaaataac cactcagtta tttaccttac tttacgcgcg cgtaactctg
    14101 gcaacatcac tgcaggatag cggtcaattt acctcctcaa acgcaacgca aacctagaac
    14161 ggcttcggcc tatgattaac aaattactct atgaattttg gtttgcagga aggcagcaag
    14221 tgagtgaatc cccgggagct tacaacagta agtgacagag gtgaacgaac gcagctgccg
    14281 cacctgtaag ccaaaagacg acgagtaaaa tgccaggttt tactatggat acgaaaaaac
    14341 tattcaagca cataccctgg gtgattctcg gaatcatcgg tgcattctgc ctcgcggtag
    14401 ttgcattacg tcggggggag cacgtcagcg ccctgtggat cgtggtcgcc tctgtgtcgg
    14461 tgtatctggt ggcgtatcgc tactacagtc tgtacatcgc ccagaaggtg atgaaactcg
    14521 accccacgcg cgcgacgcct gcggttatta acaacgacgg tctgaactac gttccgacca
    14581 accgttacgt gttgtttggt caccacttcg ccgctatcgc cggtgccggt ccgctggttg
    14641 gtccggtgct cgccgcgcag atgggctacc tgcctggcac gctgtggctg ctggcggggg
    14701 tagtactggc cggtgcggtt caggacttta tggtgctgtt tatctcctct cgccgtaacg
    14761 gcgcatctct cggtgagatg atcaaagaag agatgggacc agtaccgggg actatcgcgc
    14821 tgtttggctg tttcttaatc atgatcatca tcctcgccgt tctggcgctg attgtggtta
    14881 aagccctggc cgaaagtccg tggggtgtct tcaccgtttg ctcaaccgta ccgattgcgc
    14941 tgtttatggg tatctacatg cgctttatcc gtccggggcg tgtaggtgaa gtttctgtta
    15001 ttggtatcgt gctgctggtt gcctctatct atttcggtgg cgtgattgct cacgatccgt
    15061 actggggtcc ggcactgacc tttaaagaca ccaccattac cttcgcgctg attggctatg
    15121 cgtttgtttc cgcactgctg ccggtgtggc tgatcctcgc accgcgcgac tatctggcaa
    15181 ccttcctgaa aatcggcgtt atcgtcggcc tggcgctggg tatcgtggta ctgaacccgg
    15241 aactgaaaat gcctgcaatg acccagtaca ttgacggtac tggcccgctg tggaaaggcg
    15301 ctctgttccc gttcctgttc atcaccatcg cctgtggtgc ggtatctggc ttccacgcgc
    15361 tgatctcttc cggtacgacg ccgaaattgc tggctaacga aaccgacgcg cgtttcattg
    15421 gctacggcgc aatgctgatg gaatccttcg tggcgattat ggcgctggtt gctgcgtcca
    15481 tcatcgaacc gggtctttac ttcgcgatga ataccccgcc tgctggcctt ggcatcacca
    15541 tgcctaacct gcatgaaatg ggtggcgaga acgcgccgat catcatggcg cagctgaaag
    15601 acgttaccgc acacgcggcg gcgaccgtca gctcctgggg cttcgtgatt tcgccagagc
    15661 agatcctgca aaccgcgaaa gacattggtg agccttctgt cctgaaccgt gcaggtggcg
    15721 cgccgacgct ggcggtaggt atcgctcacg tgttccacaa agtgctgccg atggctgaca
    15781 tgggcttctg gtatcacttc ggtattctgt tcgaagccct gttcatcctg accgcgctgg
    15841 atgcgggtac tcgttctggc cgctttatgc tgcaagacct gctgggtaac ttcatcccgt
    15901 tcctgaaaaa aaccgactct ctggttgccg gtatcatcgg tactgcgggc tgtgtgggtc
    15961 tgtggggcta cctgctgtat cagggcgtgg tcgatccgct gggcggcgtt aagagcctgt
    16021 ggccgctgtt cggtatttcc aaccagatgc tggcagccgt agcgctggta ctgggcaccg
    16081 ttgtgctgat taagatgaag cgcacccaat acatctgggt aactgttgtt ccggctgtat
    16141 ggctgcttat ctgcaccacc tgggcgctgg gtctgaaact gttcagcacc aacccgcaga
    16201 tggaaggctt cttctacatg gcaagccagt acaaagagaa gattgctaac ggtactgacc
    16261 tgacggcgca gcagattgcc aacatgaacc acatcgttgt gaacaactac accaacgcag
    16321 gcctgagtat tctgttcctg attgtggtgt acagcatcat cttctacggt ttcaaaacct
    16381 ggcttgcggt gcgtaacagc gacaaacgta ctgacaaaga aactccgtac gttccaatcc
    16441 cggaaggcgg cgtgaagatc tcttcgcacc actaaccggt tgccggatgc gctgcgcgta
    16501 tccggcctac aaagtgtcta tcgtaggccg gataaggcgt ttacgccgca tccggcaaat
    16561 ccctagcccg gaccttccgg gctttacgca tatctggaag gcaaaatgtt tggtaactta
    16621 ggacaggcaa aaaaatatct cggccaggcg gcgaagatgt tgattggcat tccagactac
    16681 gacaactacg tcgagcatat gaagaccaac catcccgaca agccgtacat gagctatgaa
    16741 gaattcttcc gcgaacgcca gaacgcgcgc tacggcggcg atggtaaagg cggtatgcgc
    16801 tgttgttaat ggagagagca tgaacccgat tgcagttacc ctactcaccg gttttttagg
    16861 cgcgggcaaa accaccctgc tgcgccatat tcttaacgaa caacacggct acaagattgc
    16921 cgtgattgaa aacgaattcg gcgaagtctc cgttgatgat caactgattg gcgaccgcgc
    16981 cacgcagatc aaaacgctga ccaacggctg catctgctgt tcgcgctcca acgagctgga
    17041 agacgcacta ctcgacctgc tggataatct cgacaagggc aatattcagt tcgaccgtct
    17101 ggtcattgaa tgcaccggca tggccgatcc cggcccgatt attcagacct tcttctccca
    17161 tgagatttta tgccagcgct acctgctgga cggggtgatt gcgctggtgg atgcggtaca
    17221 tgccgatgag cagatgaacc agttcaccat cgcccagtcc caggttggct acgccgaccg
    17281 tattctgctg acgaaaaccg acgtcgcagg cgaagcagag aaactgcgtg aacgcctggc
    17341 gcgcatcaac gcccgcgcac cggtctacac cgttacccac ggcgatatcg acctgggcct
    17401 tctgttcaac accaacggtt ttatgctgga agaaaacgtc gtcagcacca aaccgcgttt
    17461 ccactttatc gcggacaaac aaaacgatat ttcgtcgatt gtggtggaac tggattaccc
    17521 ggtagatatc agcgaagttt cccgggtgat ggaaaacctg ctgctggaat cggcggataa
    17581 actgctgcgt tacaaaggga tgctgtggat tgacggcgaa cctaaccgcc tgctgttcca
    17641 gggcgtccag cgcctctaca gcgccgactg ggaccgcccg tggggcgatg aaaaaccgca
    17701 tagcacgatg gtgtttatcg ggattcagtt gccggaggat gagattcggg cggcgtttgc
    17761 gggactcaaa aagtaaccag ccctccaaca tcacaatacc tgagacttta tcaccctcat
    17821 attcctccag aatatgaggg cattcgggct taattatctc tgaacgtgca acacttccta
    17881 cgactcctta tgcgcctcca catcctgctt cgttaaccag agcgacttac gaccaaaatt
    17941 ttcgtacatt ttcagctgat cttcatagtg ctgatcaact gttccatcgg gagcaataaa
    18001 cccactctga ccgggtgcga ccacatccca ggcaagcacc ggacgatcgc ttgtcgttgg
    18061 tgagaaaaca atcatatcgt tttctgttcc acggttttga tactccgcct gatgacgcgt
    18121 ttcttccgct gcggcctgcg gtacatcaaa gaaattattt gcccggaacg ttaaggccat
    18181 tgcaggtgtt ttccagttac tcacattatt gccatagcgt ttggaaagag tctcccaggt
    18241 atcttccagc gcagccaaca caacctcctg ctgtggtttc ccagcaaaca gatcaaccgc
    18301 ctgtgggatt ggtgatttgt ctccctgcac cgcctcatac aaaatttttg ctccaacact
    18361 tatattcagc gaaccagttg ggccgtcctg ggttgtttcg tagccactgg cgctgtacca
    18421 cttatcaaat ggcataggta cggcagccac tacggtacgc ttcaacatac tggtcagcca
    18481 aacgttcagg atggcagagc ctggc
//
LOCUS       DADMIB010000077        18484 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.077, whole genome shotgun sequence.
ACCESSION   DADMIB010000077 DADMIB010000000
VERSION     DADMIB010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18484
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.077"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            353..1711
                     /locus_tag="JNZ89_002433"
     CDS             353..1711
                     /locus_tag="JNZ89_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000823236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HAY8936285.1"
                     /translation="MKRKIIPVLIGCTLSFSALAAQPTAERYVVSFPEGTHVNYAGAF
                     ASAFPNGLPVGIGSGLLFTGKQGDALTFATITDRGPNADSPKEGKNETKIFVTPDFAP
                     LLMTIRVQNGKAEAIDPRPLHDDKGAINGLPLASDVIGSTNEVAFSDTLHRLKGDNRG
                     LDTEGITPDGKGGYWLCDEYGPFLINIDSKGKILAIHGPQAAEGEKAIAGGLPNILKW
                     RQANRGFEGLTRMPDGRIIVAVQSTLDIDAKSKKKALFTRLVSFDPASGKTAMYGYPI
                     DSAAYSKNSDAKIGDIVALDNQHILLIEQGRDKNNRMRNLIYEVDLNKASDLSGFDKP
                     GEYPEFDDEKTLSQRGITLAQKTQVVDLRSLGWQQEKAEGLALIDSKTLAVANDNDFG
                     VKVAMQHPVEGKTFKDYRVNAEGKLTLDDKQVETTLRVKPLEKPESDSELWIVTLPEA
                     LK"
     gene            complement(1950..3335)
                     /locus_tag="JNZ89_002434"
     CDS             complement(1950..3335)
                     /locus_tag="JNZ89_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY8936286.1"
                     /translation="MNDISSDDIFLLKQRLAEQEALIHALQEKLSNREREIDHLQAQL
                     DKLRRMNFGSRSEKVSRRIAQMEADLNRLQKESDTLTGRVYDPAVQRPLRQTRTRKPF
                     PESLPRDEKRLLPAAPCCPNCGGSLSYLGEDTAEQLELMRSAFRVIRTVREKHACTQC
                     DTIVQAPAPSRPIERGIAGPGLLARVLTSKYAEHTPLYCQSEIYGRQGVELSRSLLSG
                     WVDACCRLLSPLEEALHGYVMTDGKLHADDTPVQVLLPGNKKTKTGRLWAYVRDDRNA
                     GSALAPAVWFAYSPDRKSIHPQTHLACFSGVLQADAYAGFNELYRNGGITEAACWAHA
                     RRKIHDVHVRIPSALTEEALEQIGQLYAIEADIRGMPAEQRLAERQRKTKPLLKSLES
                     WLREKMKTLFFGSGHGGERGALLYSLIGTCKLNDVDPESYLRHVLGVIADWPVNRVSE
                     LLPWRIALPAE"
     gene            complement(3385..3732)
                     /gene="tnpB"
                     /locus_tag="JNZ89_002435"
     CDS             complement(3385..3732)
                     /gene="tnpB"
                     /locus_tag="JNZ89_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019104956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8936287.1"
                     /translation="MIPLPSGTKIWLVAGITDMRNSFNGLAAKVQTALKDDPMSGHIF
                     IFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDW
                     RQPKRLLTSLTML"
     gene            complement(3729..4043)
                     /locus_tag="JNZ89_002436"
     CDS             complement(3729..4043)
                     /locus_tag="JNZ89_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000603938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8936288.1"
                     /translation="MLVAASCEPGISISKLALENGINANLLFKWRQQWREGKLLLPSS
                     ESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFQHGTLRFNGNVSEKLLTLLIQEL
                     KR"
     gene            complement(4464..4898)
                     /locus_tag="JNZ89_002437"
     CDS             complement(4464..4898)
                     /locus_tag="JNZ89_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001556209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936289.1"
                     /translation="MRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQR
                     GNDGQPPWFEHDQMTVAEKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVM
                     CDEDYEGEKCCPRCGTGVYSRAWGRQEVPSEDARADNPLQRL"
     gene            complement(4886..5287)
                     /locus_tag="JNZ89_002438"
     CDS             complement(4886..5287)
                     /locus_tag="JNZ89_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004020115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936290.1"
                     /translation="MYAKSFIALDGNGRLTGARTAQAAPYANYTCHLCGSALRYHPQY
                     ETELPWFEHTDDRLTEHGQQCPYVRPERREIQLIKRLQQFVPDALPVVRKASWHCRQC
                     HHDYYGEQYCTHCQTGGFSIPRTTQEEICEF"
     gene            complement(5547..6116)
                     /locus_tag="JNZ89_002439"
     CDS             complement(5547..6116)
                     /locus_tag="JNZ89_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000221568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inovirus Gp2 family protein"
                     /protein_id="HAY8936291.1"
                     /translation="MTYKYNPFWQQRIRETVRHALNVHPRLTALRVDLRLPDVPAATD
                     AAVISRFINALKARIDAYQKRKHREGKRVHPTTLHYVWAREFGECKGKKHYHLMLLVN
                     RDTWCRAGDYRAPESLAGMIKQAWCSALGVDVGCHATLVHFPAWPAVWLARNDDTGFQ
                     QVLERADYLAKEHTKAHCTGERNFGCSRS"
     gene            complement(6861..7037)
                     /locus_tag="JNZ89_002440"
     CDS             complement(6861..7037)
                     /locus_tag="JNZ89_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001446448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin activation protein"
                     /protein_id="HAY8936292.1"
                     /translation="MAARNTSGDAGKVNSHTRYKLTLAELEAFNSAVDNRLAELTMNK
                     LYDRAPASVWKYVT"
     gene            complement(7338..7604)
                     /locus_tag="JNZ89_002441"
     CDS             complement(7338..7604)
                     /locus_tag="JNZ89_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000840368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936293.1"
                     /translation="MAEPYRYTGWLLRKDASARTRDKEGIVFVRTGREAGVLIIAELF
                     SEVVTVSQPVPGEEETDITDGIRLSDWYYKYKKSSESNVKDLPE"
     gene            7745..7951
                     /locus_tag="JNZ89_002442"
     CDS             7745..7951
                     /locus_tag="JNZ89_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HAY8936294.1"
                     /translation="MATPVSLMDDQMVDMAFITQLTGLTDKWFYRLIRDGAFPAPIKL
                     GRSSRWLKSEVEAWLQARIAQPRP"
     gene            8046..8648
                     /locus_tag="JNZ89_002443"
     CDS             8046..8648
                     /locus_tag="JNZ89_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001760115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936295.1"
                     /translation="MKQQYQTRYEWLHESYQKWLTGFTRHAVSWGVCHPNIYYFHNLT
                     PGWVSFNGEKPEIAIVPQSLHRLIYGPDKRATPPLDDDLIVNLCTSEHLLVHHPMLEG
                     ILLSECERLRQRSLANKLISLFRQFGGTELRLKLVWLCWLDLMTGNSPEDWKENLKRK
                     SEKELEEWIINRQRQSAALTDLMDQYVLLAYRTTVDDSRN"
     gene            9848..10765
                     /locus_tag="JNZ89_002444"
     CDS             9848..10765
                     /locus_tag="JNZ89_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936296.1"
                     /translation="MVQKILSDKVMNERTNAYYSYYLGERNISVLPLNVYDPPERFIA
                     YIKKNRENLNITLSDFELEQIISGMRLKALAFLVPLEKISWIAGSERACLFSWYLLMQ
                     FIQNNRAKISADLLQKNKLYLKEEYLEGNAFPSDSSTQFRQILRVLDILSDKNLRDEW
                     IIQTKDRWMRAFKSKSPFSYLLPENEHECIWTWNYLKGKNIALEKLASFPGSADIYHA
                     IHLSFDIWVTCPLTSPDDIKNFRNSFNKAKAQRKYKKMQEDKVNVQFFLDAETRAQLK
                     ELSRVRRLSTGEMLHDLIVEEYKRYRHSR"
     gene            10850..11722
                     /locus_tag="JNZ89_002445"
     CDS             10850..11722
                     /locus_tag="JNZ89_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase family protein"
                     /protein_id="HAY8936297.1"
                     /translation="MNPSDAIEAIEKPLSSLPYSLSRHILEHLRKLTSHEPVIGIMGK
                     SGAGKSSLCNALFQGEVTPVSDVHAGTREVQRFRLSGHGHSMVITDLPGVGESRDRDA
                     EYEALYRDILPELDLVLWLIKADDRALSVDEYFWRHILHRGHQQVLFVVTQADKTEPC
                     HEWDMAGIQPSPAQAQNIREKTEAVFRLFRPVHPVVAVSARTGWELDTLVSALMTALP
                     DHAASPLMTRLQDELRTESVRGQAREQFTGAVDRIFDTAESVCVASVARTVLRAVRDT
                     VVSVARAVWNWIFF"
     gene            12094..14940
                     /gene="ag43"
                     /locus_tag="JNZ89_002446"
     CDS             12094..14940
                     /gene="ag43"
                     /locus_tag="JNZ89_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Ag43"
                     /protein_id="HAY8936298.1"
                     /translation="MKRHLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVVLSLAA
                     VTSVPALAADTIVQAGETVNGGTLTNHDNQIVLGTANGMTISSGLEYGPDNEANTGGQ
                     WIQNGGIANNTTVTGGGLQRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHE
                     GGIATGTVINEKGWQTVKSGAMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINE
                     NGRQIVAAEGTANTTVVYAGGDQTVHGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQ
                     IIKEGGLADFTTVNQKGKLQVNAGGTATHVTLKQGGALVTSTAATVLGSNRLGNFTVE
                     NGKADGVVLESGGRLDVLEGHSAQKTRVDDGGTLAVSAGGKATGVTMTSGGALIADSG
                     ATVEGTNASGKFSIDGTSGQASGLLLENGGSFTVNAGGLASNTTVGHRGTLTLAAGGS
                     LSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRFDNQTTPDAALSRAVAKGDSPVTFHK
                     LTTSNLTGQGGTINMRVRLDGSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVATSGQ
                     GIRVVDAQNGATTEEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTS
                     MLTQAMDYDRILAGSRSHQTGVNGENNSVRLSIQGGHLGHDNNGGIARGATPESSGSY
                     GFVRLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKDDDGSRAGTVRDDAGSLGGYLNL
                     THTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQL
                     HYTWQGLTLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMSFGEGTSSRDTLRDSTK
                     HRVSELPVNWWVQPSVIRTFSSRGDMSMGTAAAGSNMTFSPSRNGTSLDLQAGLEARV
                     RENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF"
     gene            15011..15169
                     /locus_tag="JNZ89_002447"
     CDS             15011..15169
                     /locus_tag="JNZ89_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF905 domain-containing protein"
                     /protein_id="HAY8936299.1"
                     /translation="MPGCTSRLLPEGPFSREQAVAVKTAYRNVFTEDDQGTYSRLVIR
                     NAEGQLRW"
     gene            15324..16142
                     /locus_tag="JNZ89_002448"
     CDS             15324..16142
                     /locus_tag="JNZ89_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 domain-containing protein"
                     /protein_id="HAY8936300.1"
                     /translation="MRLASRFGYANQIRRDRPLTHEELMHYVPSIFGEDRHTSRSKRY
                     AYIPTITVLESLQQEGFQPFFACQTRVRDPGRRGYTKHMLRLRRAGEINGEHVPEIIL
                     LNSHDGTSSYQMLPGYFRFVCQNGCVCGQSLGEVRVPHRGNVVEKVIEGAYEVVGVFD
                     RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTADILTPRRREDYGKDLWS
                     AYQTIQENMLKGGISGRSAKGKRIHTRAIHNIDTDIKLNRALWVMAETLLESLR"
     gene            16484..16957
                     /locus_tag="JNZ89_002449"
     CDS             16484..16957
                     /locus_tag="JNZ89_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708769.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antirestriction protein"
                     /protein_id="HAY8936301.1"
                     /translation="MKTLSQNTTASACAPETGLQQLVATPVPDEQRISFWPQHFGLIP
                     QWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGN
                     RAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID"
     gene            16973..17449
                     /locus_tag="JNZ89_002450"
     CDS             16973..17449
                     /locus_tag="JNZ89_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RadC family protein"
                     /protein_id="HAY8936302.1"
                     /translation="MQQLSFLPGNMTPGERSLILRALQTLDRHLHEPGVAFTSTRAAR
                     EWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAA
                     VVLAHNHPSGEVTPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL"
     gene            17512..17733
                     /locus_tag="JNZ89_002451"
     CDS             17512..17733
                     /locus_tag="JNZ89_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF987 domain-containing protein"
                     /protein_id="HAY8936303.1"
                     /translation="MRIITRGEAMRIHQQHPASRLFPFCTGKYRWHGSAEAYTGREVQ
                     DIPGVLAVFAERRKDSFGPYVRLMSVTLN"
     gene            17896..18270
                     /locus_tag="JNZ89_002452"
     CDS             17896..18270
                     /locus_tag="JNZ89_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system YeeU family
                     antitoxin"
                     /protein_id="HAY8936304.1"
                     /translation="MSDKLSGITHPDDNHDRPWWGLPCTVRPCFGARLVQEGNRLYYL
                     ADRAGIRGRFSDADAYHLDQAFPLLMKQLELMLTSGELNPRYQHTVTLYAKGLTCEAD
                     TLGSCGYVYLAVYPTPAPATTS"
     gene            18317..>18484
                     /locus_tag="JNZ89_002453"
     CDS             18317..>18484
                     /locus_tag="JNZ89_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936305.1"
                     /translation="MKTLSDTHVREVSRCPSPVTIWQTLLIRLLDQHYGLTLNDTPFV
                     DERVIEQHIEAG"
BASE COUNT         4356 a         4958 c         4859 g         4311 t
ORIGIN      
        1 gggatatggc cctgcctttc cagcaatcgt cgattgttat accagtccac ccacgtgagt
       61 gtggtcagct catcatactg acacgtgcat tacccctacc gcgataatgc aaccgtacaa
      121 tatagggcgt ttcctaaacg cagccctcat cactccaatc caacaagaca cagcattttt
      181 gatcacgaag aaagacaaat aatttccgta aatgtttccg ttgttacaaa taacaacagt
      241 gttttacatt tctttggcct caggcccgcg catgttgcca ttcgatgtca ttttcctgac
      301 tcgtttcttc tttatggtgt agtgtgatct tcactttata gatgctaaca atatgaaaag
      361 aaaaattatt cccgtgctaa tcggttgtac gctctctttc tctgccctgg cggcacaacc
      421 tacggctgag cgctatgtcg tcagttttcc agaaggcacg cacgtgaact acgccggcgc
      481 atttgccagt gcattcccga acggccttcc ggttgggata ggttctggcc tgctgttcac
      541 cggtaaacag ggcgatgccc tgacattcgc aaccattacc gatcgcggtc cgaacgcgga
      601 ttcaccgaaa gaggggaaaa acgaaactaa aattttcgtt acgccagatt tcgcgccgct
      661 gctgatgacg attcgtgtac aaaacggcaa agcggaggcc atcgatcccc gtcctctgca
      721 tgacgataaa ggcgcgatca acggtctgcc gctggcaagc gacgtgattg gctccaccaa
      781 tgaagtggcc ttcagcgaca cgttacatag actgaagggg gataatcgcg ggctggatac
      841 ggaagggatc actccggatg gtaaaggagg ttactggctg tgcgatgagt atggcccgtt
      901 cctgattaac atcgacagta aagggaaaat cctggcaatc cacggtccgc aggcggcgga
      961 aggggaaaaa gcgattgcgg gcggtttgcc aaatatcctc aaatggcgtc aggcgaaccg
     1021 cggctttgaa ggcctcaccc gtatgccgga cgggcgtatt attgtcgccg tgcaaagtac
     1081 gctggatatc gacgctaaga gcaagaaaaa ggcgctgttt acgcgtctgg tgagcttcga
     1141 tccggcaagc ggaaaaaccg cgatgtacgg ttatcctatc gacagcgcgg cctacagcaa
     1201 aaacagcgac gctaaaatcg gagacatcgt ggcgctcgat aaccagcaca tcctgctgat
     1261 cgaacaggga agagataaaa acaacagaat gcgtaacctg atttacgagg tcgatctcaa
     1321 taaggcgagc gacctgtcag gcttcgacaa gccgggtgag tatccggagt ttgatgatga
     1381 gaaaaccctg tcacagcgcg gcattaccct tgcgcagaaa acgcaggttg ttgatctgcg
     1441 ctccttgggc tggcagcagg agaaggctga agggttggcg ctgatcgaca gcaaaacgct
     1501 ggcggtggcg aacgataacg actttggcgt gaaggtggcg atgcaacatc cggtcgaggg
     1561 caagacattc aaggattatc gggtgaacgc ggaaggaaag ctgacgcttg acgacaagca
     1621 ggttgaaacg accctcagag tgaagccact ggagaaaccg gagtctgaca gtgaactgtg
     1681 gattgtgacg ctgccggaag cgttgaaata agtttataag gtacggacag cagtatcgct
     1741 tagtttttca aattcatgta tgtgaacaat attggggttc cggcgtagac ccccaatgaa
     1801 agcgtcacca cgtgaaaaca tgcctgcacg gtttacacgt catcccatgg tggcagccgg
     1861 ttaactttcc tgcgccacca gtggaaaaag gccataagca gtccgaacaa aagtaagcgt
     1921 acagcgaggg ccgtattgac ggggatgtgt tattcagctg gcagtgctat gcgccacgga
     1981 agcagttcgc tgacccggtt gaccggccag tctgctatga cgccaagcac atggcgaagg
     2041 tagctttctg gatccacgtc attcagtttg cacgtcccga tcaggctgta cagtagcgct
     2101 ccccgctcac caccatggcc agagccgaag aacagggtct tcatcttttc acgcaaccag
     2161 ctttccaggg atttcaacag cggtttcgtt tttcgctgac gttcagcaag ccgctgctct
     2221 gccggcattc cccttatatc cgcctctatg gcgtacaact gaccgatctg ctccagggct
     2281 tcttccgtca gtgctgacgg gatgcggacg tgcacatcgt ggatctttcg gcgggcatga
     2341 gcccagcagg cagcttccgt tatcccacca ttgcgataca gctcgttgaa cccggcgtac
     2401 gcatccgctt gcagcacacc gctgaagcaa gcaagatgag tctgcggatg gatgcttttt
     2461 ctgtccgggc tgtaagcgaa ccacactgca ggtgccaacg ctgacccggc attgcggtca
     2521 tcacgaacat acgcccacaa ccgcccggtc ttcgtcttct tattacccgg cagcagtacc
     2581 tggaccgggg tatcatcggc atggagtttg ccgtcagtca tgacatagcc atgaagcgcc
     2641 tcttccagcg gagacagcag ccggcagcat gcatccaccc agcccgacag cagtgaacgg
     2701 ctcagctcca caccttgccg gccgtatatt tctgactggc aatacagcgg ggtgtgctct
     2761 gcatacttcg aggtcagcac gcgggccagc agccccggtc cggcgatacc ccgctcgatg
     2821 ggccgcgaag gtgcaggtgc ctgcacgatg gtatcgcact gagtacaggc atgtttttcc
     2881 cgtaccgtcc ggataacccg gaaggcgcta cgcatcaact ccagctgttc ggcggtatcc
     2941 tcgcccagat agctcagtga accgccgcag ttcgggcagc acggcgccgc aggcaacagt
     3001 cgcttttcgt cacggggtag tgattcaggg aacggcttac gggtgcgggt ctgacgcaac
     3061 ggacgctgta ctgccgggtc atacacccta ccagtcagcg tatcgctctc tttctgaagc
     3121 cggttcagat cggcttccat ttgtgcgata cggcgggaga ctttttcgga acgactgccg
     3181 aagttcatcc ggcggagttt atccagctgc gcctgcagat ggtctatttc gcgctcccgg
     3241 ttgctcagct tttcctgcag ggcgtggatc agcgcttcct gttcggccag gcgctgtttc
     3301 agcaggaaga tgtcgtcaga agagatgtcg ttcataagcc cgtattttac cgggcttatt
     3361 ctgtgacaac caggataaag agatttacag catggtcagg gaggtcagca gccgcttggg
     3421 ctgtcgccag tcgatacctt ccagcagcat cgccagctgc gcctgcgtaa ggaacacttt
     3481 gccatcacgg gctgacggcc aggcgaagcg cccacgctcc agccgtttgg tcaggaggca
     3541 cagtccgtcg ccggtggacc acagcagttt aacctgactg ccgctgcggc cccggaaaat
     3601 gaaaatatgg ccggacatgg gatcgtcttt cagcgccgtt tgtactttcg cagccaggcc
     3661 gttgaagcta tttctcatat cggtgatacc ggcaaccagc caaattttgg tcccggaagg
     3721 taacgggatc atcgcttcag ttcctgtatc agcagagtca ggagcttttc gctgacattg
     3781 ccattgaagc ggagcgtccc gtgctggaac gttacctcac agctgatact gagggtttcc
     3841 gggtcctctg cgagcgattc tggctgttcg gcagctgcat cgagagtcac aggaagtagc
     3901 tgggggctct ctgaagaagg taatagcagc tttccctcgc gccattgttg tcgccatttg
     3961 aacaacagat tggcgttaat gccattttca agagcaagtt ttgagatgga tatcccgggt
     4021 tcacaggagg cagcaacgag cagctgttta aattcgggag gataattagg gcagcctttt
     4081 cgcctgccgg gagtcacatt tttctgcata tctgacactt tggttcccac tacttatttg
     4141 gtggacacca ctttgtctaa ttcgtcagat tctgaccaga cggttcaggc tgtacgctta
     4201 ccactatttt atccctgttg aatttggtta agccggtgca gacgcgccgg gaaacgcaca
     4261 cctgaaccgg cacaataaaa tacaatacaa ccccctgtta ctggagatac gaatggaatg
     4321 acgaggcagc ctgtcagtca cagggggctg ttggcataaa atcaacggaa aggccaccaa
     4381 caccggaatt aagctccaca gtccccgcac tggcaatcca ttcccgggaa aggcatcacc
     4441 gcaaactgct ccggaggcaa ccattacagc ctctgtaacg gattatcagc cctggcatct
     4501 tccgacggca cctcctgccg cccccacgcc ctgctgtata ccccggtacc gcagcgtggg
     4561 cagcactttt ccccctcata atcttcgtca cacatcacac aaaaccactt tctcaccttc
     4621 accgtataat ccggaaccgt catgccctgc agatgcaaac gacgggcctc tttctctgcc
     4681 gggtcaagcc aggtacatcg cagcaggatt ttttcagcga cagtcatctg gtcatgttca
     4741 aaccacggtg gttgtccgtc attgccccgc tgaagtgtta acgggcatcc acaggacaca
     4801 cagcacaaaa cgtcctgtcg gttgtgcttc gcagcttctt tcgccgtaac aaaatggcct
     4861 ttgctgtcat tcgccatata acagttcaga attcgcatat ttcctcctga gttgtccggg
     4921 gaatactgaa tcctccggtc tggcagtgtg tgcagtactg ctccccataa taatcgtggt
     4981 gacattgtct gcagtgccag ctggctttac gcaccacggg taaggcatcc ggtacgaatt
     5041 gctgcagacg tttaatcaac tgtatttctc tgcgctccgg cctgacataa gggcactgtt
     5101 gaccgtgctc tgtcagcctg tcgtcagtgt gttcaaacca gggaagttca gtttcgtatt
     5161 gcggatggta tctgagtgca ctgccacaca agtggcaggt gtagttagca taaggtgcgg
     5221 cctgtgcagt acgggcgccc gtcagacgtc cgttgccatc aagagcgata aaggattttg
     5281 cgtacatagt catatacctc agccgccaga cgacacgcag gcaacagccg tcccggtacg
     5341 ggcagcgtgg tcagggtgtg aatggcggtt cagttaaaat ctggactgga gtttgggtaa
     5401 agcaggctgg ttgctgttac agcactgtgg ttgtcacaca atggaacact gacgtaaaaa
     5461 acagtcagtg ggcgagtgga tacatcgttg ccgccagaca acaacccata cttttggttt
     5521 gccggatatt ggcgcgccag tcgtgctcaa ctccggctac agccaaaatt gcgctcaccg
     5581 gtgcagtgag ctttggtatg ctccttcgcc agatagtcag cacgttccag cacttgctga
     5641 aagccggtgt catcattacg cgccagccac accgccggcc aggccggaaa atgcaccagc
     5701 gtggcatggc acccgacatc cactcccagg gcactgcacc acgcctgttt aatcatcccg
     5761 gccagagact ccggagcgcg gtaatcaccg gcacgacacc aggtatcccg gttgaccagc
     5821 agcatcaggt gatagtgttt tttacctttg cactccccaa actcccgggc ccagacgtaa
     5881 tgcagggttg tgggatgcac gcgtttacct tcccgatgct tacgtttctg gtaagcgtcg
     5941 attcgggctt tcagggcatt gatgaagcgg gatatcacag ctgcgtccgt tgctgccggt
     6001 acatccggga gacgcaggtc aacccgcaat gccgtcaggc ggggatgaac attcagtgcg
     6061 tgccgcaccg tctcacgaat acgttgctgc cagaaggggt tgtatttgta ggtcatggtt
     6121 aaatctccgt atggttcata cggaatagcc acgtcgtaaa aaatacgcag agtccctgaa
     6181 gtgacctccg gcaggacact gtctcaggca ctctgtgata acccgaacgg tcgtctccgg
     6241 actgacggtt gaattttcag cgtcgttttt taatgtaaaa aaccggttac gggtaaggct
     6301 gtgaggaggg agtgatggtg atacgcaaaa agaagtgcag ggactgtgga aacgcgatta
     6361 ctcataatac agtgtgttgc ccgtattgtg gttctgtcga ccccttcggc tactaccgga
     6421 atacagaccg tatcgttacc atactgctgg cgctgattat tgtggtcctg ctgactactg
     6481 tcagcgtcag tgtgtgtata ctgtgtagct ggtgagataa cggttcatgt atcccctgag
     6541 ctgacagtgt accgtgtata ttaagcgtaa ccgacaggtt ctccttcata ccatattaaa
     6601 ttttccaggg attgccgctg ccttatttcg tcccatacag gaaaactcat ctgggtttct
     6661 gacaaatacg cgaaactcac agcccctcaa tatcaaccac acgttgtaag ccggtaatac
     6721 ctgaaaatca gcctattacc gcccacgcct ccggcaccat tcccttttga tttcgaattc
     6781 tttgttgtcg ctataccgct taatgttccc ggtcctccgg tgcagataac accggagtca
     6841 tcgtagcgct gcttcaatat tcaggtgacg tatttccaga cggaagccgg cgcgcgatcg
     6901 taaagtttgt tcattgtcag ttctgccagc cggttgtcaa cggcagagtt aaaggcttcc
     6961 agctccgcaa gggtaagttt ataacgcgtg tgggaattca cttttcccgc gtctcctgac
     7021 gtattacggg ctgccactta cctggtgtcc cgcaatacag ccttagtgtt ccgttatcgg
     7081 ggatccggac gcaccgcaac aaccggggaa gtatttctgg tttagagcag tgtcaagagg
     7141 gatttctcag cccctcactc accggctcag tctcagggca ggagcattaa tacgctcagt
     7201 tcatgtctta tacaggaatg ggcacagggg gagctggcgt gtcactgctg attttacgca
     7261 tcagcgttca tgtatctgca ctctgataca tgaacgattc acagcgctct gttaccggag
     7321 agatttactc tcttagctta ctctggcaaa tcctttacgt tactctctga tgacttctta
     7381 tatttataat accaatcaga cagccttatc ccatcggtga tatcagtctc ctcctcgcca
     7441 ggaacgggct gactcactgt aactacctcc gaaaacaact ctgcaattat cagaacgcct
     7501 gcttctctcc ctgtcctcac gaaaactatc ccctctttat cgcgcgtgcg tgcggaagca
     7561 tcttttcgca acaaccaccc ggtataccgg tacggctcag ccaccgcaac ctccccgttt
     7621 atctcctggc ggtcacattc ccgattattt tttacgtttc tccccggttg ttatgccggt
     7681 gaaggtggcg cgctgttttc atgaccacac cggctggttt aacaacatcc ggaggaacat
     7741 tctcatggct accccagttt cactgatgga tgaccagatg gtcgacatgg catttatcac
     7801 tcaactgacc ggcctgacag ataagtggtt ttacaggctc atcagggatg gggcctttcc
     7861 ggctcccatc aagctgggcc gcagctcccg ctggctgaaa agtgaagtgg aagcctggct
     7921 acaggcgcgt attgcacagc cccgcccgta atttctgacc gttatccgtt cacccgcagc
     7981 agacgtaatc cccggcctgc cggcggcatt ctgctgcctg ttatatcccc gtgaggaata
     8041 tgaaaatgaa acaacagtat cagacccgct acgaatggct ccacgaaagc taccagaaat
     8101 ggctgaccgg cttcacccgg cacgccgtat cctggggcgt gtgtcatccg aatatctact
     8161 acttccataa tctgacgccc ggttgggtgt cattcaatgg tgaaaaaccg gagattgcca
     8221 tcgtacccca gagcctgcac cggctgattt atggccctga caaacgggcc acgccgcccc
     8281 tggatgatga tctgatagtg aatttatgca ccagtgaaca tctgctggtt catcatccga
     8341 tgctggaagg cattctcctg tctgaatgtg aacgtctgag gcagcgttct ctggcaaata
     8401 aactgatcag cctcttccgt cagtttggtg gcacggagtt gcgcctcaaa ctggtctggc
     8461 tttgctggct tgatttaatg accggaaaca gccctgaaga ctggaaagag aacctgaaac
     8521 ggaaatcaga aaaagagctg gaggaatgga tcatcaaccg tcagaggcag agcgcagcac
     8581 tgacggatct gatggatcag tacgtgctcc tggcataccg cacaacggtt gacgatagcc
     8641 gcaactgatg ccggttgctt ccggaaggtg tgacaaaata cggaaatgat gatgctcccg
     8701 gcccccatgc tcacctgcag agcgtgttcg tcgtcatcat actgagccat gacgggcgtc
     8761 ttaagggcat cctgtcattg ctgagcaggc aacaccacca gaggagccac ggacagggat
     8821 gttctttaca gcccgataca cgccaggttc tcagcagact gaatgtgcag gtgcggttat
     8881 tcaccagaaa tggcatgctg cggtacatac ccatcctggt gacaatatgt acgtggcgac
     8941 agcgatcccg gcactgtgga agagactcac tcagcctgca ggatattctt tccggcatcc
     9001 gggaatgtcc gcctgaatgc aaacaggatg atatttgaat ccgtaatact gttctttcat
     9061 cataaataat ttatgcagat acagttaacc gttacagtag ccggtttgtt ttaccgggaa
     9121 ataatatccg tcagactgat accggaacat atctgaaaca cgttatgatg ttttgttatc
     9181 agaaatgttg tatattctta tccgtggcga cagtttaatg ccctctggta tcacctgata
     9241 atgtatatcc tgcgatgatt cgttatattt acgggacacg cctcttttca ttgtgctcct
     9301 tttcagactt cattttccgt aagtgttccc cggcataaag gaggtacctt tctggcgttt
     9361 ataactctct ttatcggtga cgccggtaat acagggaata ccacaccgac aaacgaggta
     9421 ttaacagacg atatttcagt gtccataatt tttctgtccg gttaaataac gtcagtctgc
     9481 tgccctctga ctgtaatcat caaagccgga atgcataccg ggttacaacg taaaaaaagt
     9541 gatgctggcc cccggtgcag ctggcgggcg aaacatgttt acctttcaat accccctgtc
     9601 tgcagtctcc actcttccat cctcttaagc tacgtcggcc acatgagtgc acttccatga
     9661 taacaggtat tcctgtcagc ataacgaagc cggttacctt cccttcctcc tgcatttcct
     9721 gtcagaatga ctatacagcg cgcagattgc ctttttattg accatcttaa tataccgtta
     9781 taaacttctt tttatcatat tattatcacc ttattatgtt taatttttaa gcagtcggag
     9841 aaagaggatg gttcagaaaa ttttgtcgga taaggttatg aatgaaagaa caaatgcgta
     9901 ttactcttat tatcttggag agcgtaatat ctccgtactg ccccttaatg tttatgatcc
     9961 cccggaacgt tttatcgctt acataaaaaa aaacagagaa aatctgaaca tcacactttc
    10021 agattttgaa cttgaacaaa taatttctgg tatgcgtctg aaggccctgg ccttcctggt
    10081 ccccctggaa aaaatatcct ggatcgcggg cagtgaacgc gcatgcttat tttcctggta
    10141 tctgttgatg cagtttatcc agaataacag ggcaaaaata agcgcagact tgcttcaaaa
    10201 gaataaactg tatcttaaag aagagtatct ggaagggaat gccttcccgt cggactcatc
    10261 gacacagttc agacaaatac tcagagttct cgatattctt tctgataaga atttgcggga
    10321 tgagtggata atccagacca aagacagatg gatgcgggca tttaaatcaa agagtccttt
    10381 cagttacctc ctcccggaga acgaacatga atgcatatgg acatggaatt atttgaaggg
    10441 aaaaaatatt gcactggaaa aactggccag ttttcctggt tctgctgata tttaccacgc
    10501 aattcacctt tcatttgaca tatgggttac ctgtccactc acctcacctg acgatataaa
    10561 aaatttcaga aacagtttca ataaggccaa ggcgcagcgc aagtacaaaa aaatgcagga
    10621 agataaagtc aatgtacagt tttttcttga cgcagaaacc agggcgcagc tcaaagaatt
    10681 atcgagggtc agaagactca gtaccggcga aatgctgcat gacctgattg ttgaagagta
    10741 taaaaggtac cgacattcca gataatttca gacatatatt atctccgtga gtcccccgcc
    10801 acctttccgg tgtgcggggg ttttgtcttt tttcaccggg aatacatgta tgaatccgtc
    10861 tgatgccatt gaggcaattg aaaaaccgct ctcctccctg ccttactcac tttcccgtca
    10921 catcctggaa catctgcgca aactcaccag tcacgaaccc gtgattggca ttatgggtaa
    10981 aagcggggcc ggtaaatcct cactctgtaa tgcactgttt cagggggagg tcaccccggt
    11041 cagtgatgtt cacgccggca cccgggaagt gcagcgtttc cgtctgagtg gccatggtca
    11101 cagcatggtt atcactgacc tgcccggggt gggcgagagc cgggacagag atgcagagta
    11161 tgaagccctg taccgtgaca ttctgcctga acttgacctg gtactgtggc tgattaaagc
    11221 cgatgaccgt gccctgtctg tggatgagta tttctggcga cacatcctgc accggggaca
    11281 tcagcaggtg ctgtttgtgg tgacgcaggc cgacaaaacg gagccctgcc atgaatggga
    11341 tatggccggt attcagcctt ctcccgcaca ggcacagaat attcgcgaaa aaacggaggc
    11401 ggtattccgt ctgttccggc ccgtacatcc ggttgttgcc gtatcggccc gcaccggctg
    11461 ggaactggat acgctggtca gtgcgctaat gacagcactt cccgaccatg ccgccagtcc
    11521 cctgatgacc cgcctgcagg acgagctgcg cacggaatct gtccggggtc aggcccgtga
    11581 acagtttacc ggtgcggtgg accggatatt tgacacggcg gagagcgtct gtgttgcctc
    11641 tgttgcccgt acggttctgc gtgccgtccg tgacacggtg gtctctgttg cccgcgctgt
    11701 atggaactgg attttcttct gaacagtctg ccagggaaat gcctgataac attacgttaa
    11761 ccaactgaaa acatgacaca aacccctcat actcctcctg tttctcttgc gtgaccgcct
    11821 tgtcgttaac agaataaaac tatcgataaa acagatatcg atcgttgcta tcgatcgttt
    11881 atagtggtta atggtctgcg aaaaggcagc tgaatctctt catcatgcag aacggaattg
    11941 cacacaacgg actgatactt ctctggcgga tgagagaggg gaagcattta tgtccgggaa
    12001 aaaccacttt atctgaccat gctgttttgt acctgccggt atccactttt gtgggtaccg
    12061 gcttttttat tcaccctctg taaggaaaag ctgatgaaac gacatctgaa caccagctac
    12121 aggctggtat ggaatcacat tacgggcacc ctggtggtgg cttccgaact ggcccgctca
    12181 cggggaaaac gcgccggtgt ggcggttgtg ctgtctcttg ctgctgtcac atcagtcccg
    12241 gcactggctg ctgacacgat tgtacaggcg ggagaaaccg tgaacggcgg aacactgaca
    12301 aatcatgaca accagattgt tctcggtacg gccaacggaa tgaccatcag tagcggtctg
    12361 gagtatgggc cggataacga ggccaatacc ggcgggcaat ggatacaaaa tggcggtatc
    12421 gccaacaaca ctactgtcac cggtggtggt cttcagagag tgaatgccgg aggaagcgtt
    12481 tcagacacgg ttatcagtgc cggaggcgga cagagccttc aggggcaggc agtgaatacc
    12541 actctgaacg gcggtgagca gtgggtacat gaaggcggga ttgcaacggg taccgtcatt
    12601 aatgagaagg gctggcagac cgtcaaatcc ggcgcaatgg caaccgacac ggttgtgaat
    12661 accggcgcgg aagggggacc agatgcagaa aatggtgata ccgggcagtt tgttcgcgga
    12721 aatgccgtac gtaccactat caatgaaaat ggtcgtcaga ttgtggctgc tgaaggaaca
    12781 gcaaatacca ctgtggttta tgccggcggc gaccagacgg tacacgggca tgcgctggat
    12841 accacactga atggcggtta ccagtatgtg cacaacggcg gtacggcgtc tggcactgtt
    12901 gtaaacagtg acggctggca gattatcaag gaaggtggtc tggcggattt caccaccgtt
    12961 aaccagaaag gcaaactgca ggtgaacgcc ggtggtaccg ccacacatgt caccctgaaa
    13021 cagggtggag cactggttac cagtactgcg gcaacggttc ttggcagcaa ccgtctgggc
    13081 aatttcacgg tggaaaacgg taaggctgac ggagttgttc tggagtccgg cggtcgcctg
    13141 gatgtactgg aaggccattc agcgcagaaa acacgggtgg atgacggcgg aaccctggca
    13201 gtgtctgccg gtggtaaggc aacaggtgtc accatgacat ccggtggtgc cctgattgca
    13261 gacagtggtg ccactgttga ggggaccaat gccagcggta agttcagtat tgatggcaca
    13321 tccggtcagg ccagcggact gctgctggaa aatggcggca gctttacggt taatgccgga
    13381 ggactggcca gcaacaccac tgtcggacat cgtggaacac tgacgctggc tgccggggga
    13441 agtctgagtg gcagaacaca gctcagtaaa ggtgccagca tggtactgaa tggcgatgtg
    13501 gtcagtaccg gcgatattgt taacgcaggg gagattcgct ttgataatca gacgacaccg
    13561 gatgccgcgc tgagccgtgc tgttgcaaaa ggcgactccc cggtaacgtt ccataaactg
    13621 accaccagta acctcaccgg tcagggtggc accatcaata tgcgtgttcg ccttgatggc
    13681 agcaatacct ctgaccagct ggtgattaat ggtggtcagg caaccggcaa aacctggctt
    13741 gcgtttacaa atgtcggaaa cagtaacctc ggggtggcaa cctccggaca gggtatccgg
    13801 gttgtggatg cacagaatgg cgccaccaca gaagaaggtg cgtttgccct gagtcgcccg
    13861 cttcaggccg gcgcctttaa ctacaccctg aaccgtgaca gcgatgaaga ctggtacctg
    13921 cgcagtgaaa atgcttatcg tgctgaagtc cccctgtata catccatgct gacacaggca
    13981 atggactatg accggattct ggcaggctcc cgcagccatc agaccggtgt aaacggtgaa
    14041 aataacagcg tccgtctcag cattcagggc ggtcatctcg gtcacgataa caacggcggt
    14101 attgcccgtg gagccacgcc ggaaagcagc ggcagctatg gcttcgtccg tctggagggt
    14161 gacctgctga gaacagaggt tgccggtatg tctctgacga caggggtgta tggtgccgca
    14221 ggccattctt ccgttgatgt taaggatgat gacggttccc gcgccggcac ggtccgggat
    14281 gatgccggca gcctgggcgg atacctgaat ctgacacaca cgtcctccgg cctgtgggct
    14341 gacattgtgg cacagggaac ccgccacagc atgaaagcgt catcggacaa taacgacttc
    14401 cgtgcccggg gctggggctg gctgggctca ctggaaaccg gtctgccctt cagtatcact
    14461 gacaacctga tgctggagcc acaactgcac tatacctggc agggacttac cctggatgac
    14521 ggccaggata acgccggtta tgtgaagttc gggcatggca gtgcacaaca tgtgcgtgcc
    14581 ggtttccgtc tgggcagcca caacgatatg agctttggtg aaggcacctc atcccgtgac
    14641 actctgcgcg acagtacaaa acaccgtgtg agtgaactgc cggtgaactg gtgggtacag
    14701 ccttctgtta tccgcacttt cagctcccgg ggtgacatga gcatggggac agccgccgcc
    14761 ggcagtaaca tgacgttctc accgtcccgg aatggcacgt cactggacct gcaggccgga
    14821 ctggaagccc gtgtccggga aaatatcacc ctgggcgttc aggccggtta tgcccacagc
    14881 gtcagcggca gcagcgctga aggttataac ggtcaggcca cgctgaatgt gactttttga
    14941 taatcaggtc actctccttc aggccccggt catcatgacc ggggcttttt actttcaggg
    15001 agcaacagat atgccgggtt gtacatcacg tttattgccc gaaggccctt tctcacgcga
    15061 acaggctgtt gccgtcaaaa cagcttaccg caatgtgttt actgaagatg accagggaac
    15121 atattcccgg ctggttatcc gtaatgctga aggtcagttg cgctggtgat gccggaacac
    15181 agcttaatac tcagctcgcc agttaagggc ttctcagaca ataaacgtca ttcatttcat
    15241 ctgtcaggcc gcgtcttctc cgggagacgc agctttttca tttattacac cagtaaatcg
    15301 taaccaccga taaggagcaa attatgcgac tagccagtcg ttttggttat gcgaaccaga
    15361 tacgccgtga ccgtccgctg acacacgaag aactgatgca ctatgttccc agtattttcg
    15421 gtgaagaccg gcatacttcc cgcagtaaac gatatgcgta cattcccacc atcaccgtac
    15481 tggaaagcct gcagcaggaa ggttttcagc cattcttcgc ctgccagacc cgcgtgcgcg
    15541 acccgggccg ccggggatac acaaaacaca tgctgcgtct gcggcgggcc ggagagataa
    15601 acggagaaca tgtccctgaa attattctgc tcaactctca tgacggtacc tccagctacc
    15661 agatgctgcc gggttacttc agattcgtct gccagaatgg ctgcgtctgc ggtcagtctc
    15721 tgggggaagt gcgtgttcca caccggggaa atgtggtgga gaaagttatc gaaggggctt
    15781 acgaagtggt gggggttttt gaccggattg aggaaaagcg tgatgccatg cagtcgctgg
    15841 tcctgccgcc accggcacgc caggcgctgg cacaggcggc actgacttac cgttatggtg
    15901 acgaacatca gccagtcacc accgctgaca ttctgacacc acgacgcagg gaggattacg
    15961 gtaaagacct gtggagcgca tatcagacca tccaggagaa tatgctgaaa ggcgggattt
    16021 ccggccgcag tgcaaaagga aaacgtatcc acacccgtgc cattcacaac atcgacaccg
    16081 atattaagct caaccgcgca ttgtgggtaa tggcagaaac gctgctggag agcctgcgct
    16141 gatgcagcat gtccctgaag gcgtgattca ggcaccagaa tcacccgacg ccccggaggc
    16201 gctgccgggg tgtcgttcca tttctgatga tgacctgtgc gcctggtgta cccgtctgct
    16261 ttaccgtccc ggagaaatca gtctgtgcag actgagtata caggcaatgg catctggcca
    16321 tccgtctgtg accggaacgg ttacgcgtac ggctgtccgg aatttcagcc gaatatcatt
    16381 catccctgat attaccgggt catcacggtc agtgatgaac gtgatgttgc cagctcccga
    16441 cctttactcc ctctcattta ttcacattac aaggatttca tacatgaaaa cattgtctca
    16501 gaacaccacc gcttcggcct gtgcaccgga gactggcctg caacaactgg ttgccactcc
    16561 cgtccctgat gaacagcgca tcagcttctg gccgcagcat tttggcctca ttccacagtg
    16621 ggtcaccctg gaaccccgtg tcttcggctg gatggaccgt ctgtgtgaag actactgcgg
    16681 tggtatctgg aatctgtaca ccctgaacaa cggcggggca tttatggcac ccgaaccgga
    16741 tgacgatgat gacgaaacat gggtactgtt caatgccatg aacggtaacc gcgctgaaat
    16801 gagcccggaa gccgccggca ttgctgcctg tctgatgacg tacagtcatc atgcctgtcg
    16861 tacggagtgt tatgccatga cggtccatta ttaccggctg cgggattacg ccctgcagca
    16921 tccggaatgc agcgccatta tgcgcatcat cgactgaatg gaggcaggga caatgcagca
    16981 gctttccttt ctgcccggaa acatgacgcc cggcgagcgc agtctcattc tgcgggccct
    17041 gcaaaccctg gaccgccatc ttcatgaacc cggcgtggcc ttcacctcca cccgtgcggc
    17101 acgggaatgg ctgattctga acatggcggg actggagcgg gaagagttcc gggtgctgta
    17161 tctgaacaac cagaatcagc tgattgccgg tgaaaccctc ttcaccggca ccatcaaccg
    17221 tacggaagtt catccccggg aagtgattaa acgcgccctg taccacaatg ccgctgccgt
    17281 ggtgctggcg cacaatcacc cgtccggtga agtcacaccc agtaaggcag accggcttat
    17341 caccgaacgt ctggtacagg cactgggcct ggtggatatc cgggtgccgg accatctgat
    17401 agtcggtggc aaccaggttt tctcctttgc cgaacatggt ctgctttaac ccgtcacaac
    17461 cacatcacac ctgttttcac ttttatcttc tgtcttcaga ggtatcacat catgagaatc
    17521 atcacccgtg gtgaagccat gcgtattcac caacagcatc ctgcatcccg tctttttccg
    17581 ttctgtaccg gtaagtatcg ctggcacggc agtgctgaag cgtatactgg tcgtgaagtg
    17641 caggatattc ccggcgttct tgccgtgttt gcagaacgcc gtaaggacag ttttggcccg
    17701 tatgtccggc tgatgagtgt caccctgaac tgatgttccg tcacccggga aacgagtacg
    17761 accagatgac ctcagacgcc gctgtggatg aggccattct catcaatgca tacatcttca
    17821 ccgaaaccgg tcagcgcgcc ggctgacctg tcatcgttaa accattctta accacttttc
    17881 agagaggatt ttatcgtgtc agacaaactc tccgggataa ctcatcccga tgacaatcac
    17941 gaccgcccct ggtgggggct tccctgcaca gtgaggccct gttttggcgc tcgtctggtg
    18001 caagagggta accgcctgta ttaccttgcc gaccgcgccg gtatcagagg ccgcttcagc
    18061 gacgcagatg cataccatct ggaccaggcc tttccgctgc tgatgaaaca actggaactc
    18121 atgctcacca gcggtgaact gaatccccga tatcagcata ccgtcacgct gtatgcaaaa
    18181 gggctgacct gcgaagccga caccctcggc tcctgtggtt acgtttatct ggctgtttat
    18241 ccgacaccag cacccgcaac cacctcataa ccccgaagct ctcaccttta gcactaccag
    18301 ttacagagaa cttaagatga aaacattatc cgacacacat gtacgggagg tatctcgctg
    18361 cccgtctccc gtcaccatct ggcagacact gctcatccga ctgctggacc agcattatgg
    18421 cctcacactg aatgacacac cgtttgtcga tgaacgtgtg attgagcagc atattgaggc
    18481 aggc
//
LOCUS       DADMIB010000078        18034 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.078, whole genome shotgun sequence.
ACCESSION   DADMIB010000078 DADMIB010000000
VERSION     DADMIB010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18034
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.078"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..456
                     /locus_tag="JNZ89_002454"
     CDS             <1..456
                     /locus_tag="JNZ89_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001058382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4432 family protein"
                     /protein_id="HAY8936306.1"
                     /translation="LYYRHRPEILLSAKSVTPRTPHAAEGLTSHLEICTPQPGFDEQV
                     YYLTLNSDSQGMSKVALVNAELGWGIYEKFDTMQLPNFIQWKNLGAGEYVMGLEVSNS
                     FPDGRDKERAQGRLPFIEPGETKKYCFELGIVDGDAEMSALKAEIAGYR"
     gene            complement(548..1897)
                     /gene="accC"
                     /locus_tag="JNZ89_002455"
     CDS             complement(548..1897)
                     /gene="accC"
                     /locus_tag="JNZ89_002455"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009483995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HAY8936307.1"
                     /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
                     ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
                     IGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
                     SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADG
                     QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
                     FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA
                     VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
                     ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK"
     gene            complement(1908..2378)
                     /gene="accB"
                     /locus_tag="JNZ89_002456"
                     /gene_synonym="fabE"
     CDS             complement(1908..2378)
                     /gene="accB"
                     /locus_tag="JNZ89_002456"
                     /gene_synonym="fabE"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HAY8936308.1"
                     /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM
                     QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
                     IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
     gene            complement(3356..4330)
                     /locus_tag="JNZ89_002457"
     CDS             complement(3356..4330)
                     /locus_tag="JNZ89_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY8936309.1"
                     /translation="MQALLLEQQDGKTLASVQTLDESRLPEGDVMVDVHWSSLNYKDA
                     LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA
                     RVKGDWLVAMPQGLDARKAIIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG
                     STAVALLHKLGYQVVAVSGRESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDT
                     VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA
                     QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN"
     gene            4482..6422
                     /gene="csrD"
                     /locus_tag="JNZ89_002458"
     CDS             4482..6422
                     /gene="csrD"
                     /locus_tag="JNZ89_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase E specificity factor CsrD"
                     /protein_id="HAY8936310.1"
                     /translation="MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQA
                     VATAIDTHLVSNDFSTLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSD
                     LFRELSVPLIKYPGMSLRLVYQDPMGNYFHSLMTTAPLTGAISFIIVMLFLAVRWLQR
                     QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT
                     LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS
                     QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT
                     LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK
                     GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
                     VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKS
                     QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL
                     KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG
                     DFFASSQPLDTNVKKYSQRYSV"
     gene            6727..7770
                     /locus_tag="JNZ89_002459"
     CDS             6727..7770
                     /locus_tag="JNZ89_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HAY8936311.1"
                     /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
                     RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNN
                     FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG
                     SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI
                     KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE
                     QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE
                     MIDMHGGDLFSEE"
     gene            7836..8921
                     /gene="mreC"
                     /locus_tag="JNZ89_002460"
     CDS             7836..8921
                     /gene="mreC"
                     /locus_tag="JNZ89_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HAY8936312.1"
                     /translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT
                     AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA
                     RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
                     VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
                     VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
                     ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPTTGIAQPTPQQPTTGNAATA
                     PAANRSPQRATPPQSGAQPPARAPGGQ"
     gene            8921..9409
                     /gene="mreD"
                     /locus_tag="JNZ89_002461"
     CDS             8921..9409
                     /gene="mreD"
                     /locus_tag="JNZ89_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HAY8936313.1"
                     /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL
                     YWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQ
                     QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA
                     VQ"
     gene            9418..10011
                     /gene="yhdE"
                     /locus_tag="JNZ89_002462"
     CDS             9418..10011
                     /gene="yhdE"
                     /locus_tag="JNZ89_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase YhdE"
                     /protein_id="HAY8936314.1"
                     /translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY
                     VVRLAHKKAQAGVAQTAQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ
                     VMTAVVLADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
                     RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG"
     gene            10001..11470
                     /gene="rng"
                     /locus_tag="JNZ89_002463"
     CDS             10001..11470
                     /gene="rng"
                     /locus_tag="JNZ89_002463"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HAY8936315.1"
                     /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
                     RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD
                     LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
                     YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR
                     VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI
                     QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
                     LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR
                     TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
                     ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM"
     gene            11538..15338
                     /locus_tag="JNZ89_002464"
     CDS             11538..15338
                     /locus_tag="JNZ89_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709041.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA2 domain-containing protein"
                     /protein_id="HAY8936316.1"
                     /translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKI
                     ESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMR
                     WQFRDLTFWQLRFRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG
                     QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQ
                     ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT
                     HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS
                     DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR
                     FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIAD
                     GQATISWLNNDKGFHLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS
                     QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR
                     NAKFAFQPDWPALTNLDIELDFINDGLWMKTDDVNLGGVRASNLTAVIPDYSKEKLLI
                     DADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV
                     TLRNNSLFIKLLDSTLKNLSGKFSFINGDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ
                     VAVNLNGNWQPAKTGVLPAAVNEALSGSVAWDGKVGIDLPYHAGATYNVELNGDLNNV
                     SSHLPSPLAKPAGEPLPVNVKVDGNLSSFELTGQAGADNHFNSRWLLGQKLTLDRAIW
                     AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLS
                     LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR
                     GDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDLTISGDTLTLTNGLI
                     DTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH
                     WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF
                     GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS
                     ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK
                     EKAQ"
     gene            15494..16939
                     /gene="tldD"
                     /locus_tag="JNZ89_002465"
     CDS             15494..16939
                     /gene="tldD"
                     /locus_tag="JNZ89_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HAY8936317.1"
                     /translation="MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY
                     HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
                     SGDGKVQTLGAVGHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLS
                     GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLD
                     GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR
                     GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ
                     DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG
                     GGQVDITSGKFVFSTSEAYLIENGKVTKPVRGATLIGSGIETMQQISMVGNDLKLDNG
                     VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
     gene            complement(17067..17996)
                     /gene="aaeR"
                     /locus_tag="JNZ89_002466"
     CDS             complement(17067..17996)
                     /gene="aaeR"
                     /locus_tag="JNZ89_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AaeR"
                     /protein_id="HAY8936318.1"
                     /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDEL
                     QVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM
                     AQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
                     MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRF
                     VTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDK
                     LPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK"
BASE COUNT         4259 a         4475 c         4959 g         4341 t
ORIGIN      
        1 ctttattatc gccacaggcc agaaatcttg ctgtcggcta aaagcgtaac gccacgaact
       61 ccgcatgcgg cggaagggtt aaccagtcat ctggagattt gtaccccaca gcccggtttt
      121 gacgagcagg tttactatct cacgttgaat agcgacagtc aggggatgag taaagttgct
      181 ctggtgaacg ccgaactggg gtggggaatt tacgagaaat tcgacaccat gcagctaccc
      241 aactttatcc agtggaaaaa tttaggcgcg ggtgagtatg ttatgggact ggaggtcagt
      301 aatagttttc ctgacggtcg tgataaagaa cgagcgcagg ggcgtctgcc ctttattgag
      361 ccaggggaaa caaagaaata ctgctttgag ctgggaattg ttgatggcga tgctgaaatg
      421 agcgcgttga aagcggaaat tgcaggctac cgttagctaa cggcaataaa aacgccgggc
      481 agcgttaaca ggcccggcgt tgattacgtt ctttgctaag cgcgatgaaa acaccgcgcg
      541 tcacaaatta tttttcctga agaccgagtt ttttctccag atagtggatg ttagtgccac
      601 catgctggaa gttctcgtca ttcatgatgc ggatctgcag atcaacgttg gttttgatac
      661 cgtcgatgat cagctcctgc agcgcattct tcatgcgagc aatcgccacg tcacggtttt
      721 caccgtagca aatcagctta ccgatcattg agtcatagta cggcggtacg gtgtagcccg
      781 cgtagatatg agactcccaa cgcactccaa aaccgccagg tgcgtggaaa cgggtgattt
      841 tgcctgggct tggcaggaag gtgttcggat cttcggcgtt gatacgacat tccaccgcat
      901 ggccgcgaac gtgaacttct tcttgcttga tcgacagcgg ttgaccggca gcgatacgca
      961 gctgttcttt gatcaggtca acgccggtga tcatttctgt aaccgggtgt tctacctgaa
     1021 tacgggtgtt catttcgatg aaatagaact cgccgttttc gaacaggaac tcgaaagtac
     1081 ctgcaccgcg atagccgata tcaacacacg ctttagcgca acgttcgccg atgtagcgac
     1141 gtagttccgg ggtaatgccc ggtgctggtg cttcttcgac cactttctgg tggcggcgct
     1201 gcatggagca gtcacgttcc gccagataga tagcgttgcc ctgaccgtca gccagtacct
     1261 gaatctcgac gtggcgagga ttttccaggt atttctccat gtaaaccata tcgttgctga
     1321 aagcagcttt cgcttccgca cgggtcatgg agatggattg tgccagttca gcgtcgccgc
     1381 gcactacgcg cataccgcga ccaccaccgc cgccggaggc tttgataatc accggataac
     1441 caatgcgttt agcaatggca cggtttttat ccatatcgtc gcccagcggg ccgtcagaac
     1501 ccggtacgca agggacgccc gcttttttca tcgccgcgat tgcggatact ttgtcgccca
     1561 tcaggcgaat ggtttctgct ttcgggccaa tgaagataaa gccggagcgt tcaacctgct
     1621 cggcaaagtt ggcgttctcg gagaggaagc cgtaacccgg atggattgct actgcgccgg
     1681 tgatttcagc ggcgctgatg attgccggga tgttcagata actttttact gacggagcag
     1741 ggccaataca gaccgtttca tctgccagta atacgtgttt tagatcgcga tccgcgctgg
     1801 agtgcacagc gacagtcttg atgcccagtt ctttacaggc acgaagaata cgcaatgcaa
     1861 tctcgccgcg gttggcaata acaattttat ccagcatgtt cgcctcgtta ctcgatgacg
     1921 accagcggct cgtcaaattc taccggttgt ccactttcga ccagaattgc tttcacggta
     1981 ccggatttgt ccgcttcgat ctggttcatc attttcatgg cttcaacgat gcacagggta
     2041 tcgcccacgt tgactttctg acccacttcg atgaacgctt ttgcgtccgg gcttggggtg
     2101 cggtagaaag taccaaccat cggggagcgt acgatgtgac cactgatttc cgctgctgct
     2161 ggcgcttcca tggaaggaac ggtcgccgga gcggctgcgt tagattgagc tggctgctgc
     2221 atcattggtg cagcgtaagc ttgttgcatc acagggaaac ttgcggcagg agctgcacgg
     2281 ctaatgcgta ctgactcttc gccttcagaa atttccagtt cggagatgcc tgattcttca
     2341 accagctcga tcagtttttt aatcttacga atatccatga gtgggttccg tactctttgt
     2401 ttagtgtgat tgtgacaggc gtttcaccgc cgtctgtaaa gcgtatgccc cgacagctgt
     2461 atgcatagcg ataaattcca gcaggccggg acgccggtct attttgcccc agagtatcaa
     2521 tgttagactt gacggacatt gtgcagcgat ctgctgctat cctccggcaa aaaacaaaat
     2581 ataccttcgt tgcgccaatg tcaccttttc cgcagcgcaa aaactgcgtc agggaggacg
     2641 aggtcgcaca ttataacgat ttcgtagcaa ttggcagcta aatactggtc ttatcaggga
     2701 agataatcaa cagctaacat gtaaataacc ttcaacaccg tgtaatttgc aacaagccgc
     2761 acaattcacg aaattagcgc catcatcgac ggaacttctt ataacgtaag gtgaaaagct
     2821 gtaaagccag ccctgcgaag atgaggggct gcaatgagat aatcttcaca gaccacaaat
     2881 aatgtaggga tgccaggatc gcgacaagat agacgacatt acgcagcggt tgctggggat
     2941 tacccaattt tcactgcatc gtctggatag atgtgaatgc taaagcacgc aaaatcaacc
     3001 gactgacaat tctcagcatt aaataggttc gagtggttaa tttgcagtca aataaaatca
     3061 gattattcac cccatggtac cagaaatcag taacaggtta agcgtagtgt cgcccaggca
     3121 aagcaccata aacctaacag gcgacggagg cgtatcaata atggctgttt agaggagtat
     3181 caatgcgcat caatttgtgg tcagtcgaaa tcatgacttt ccagtttgga tgatgttgta
     3241 caacttcctg accaaggtgt tcgacgaaag ctgtccggct aaccgctttt cccgttaacc
     3301 gattgaataa tgatgtcaaa atgagttccc tctcttatta ttccttgcta aatggttagt
     3361 taaccttcac cagcgtgcga ccctggatct ggttattaat gatggcctcg gcaaagttcg
     3421 gtgcctctga cagagatatc tcttttgccg cctgggtata gaatgattcc ggtaaatcgg
     3481 cgaccagtcg ctgccaggct tgtgcgcggc gttctggtgg cgtcattact gaatccaccc
     3541 cttgcaaacg gacattacgc agaataaatg gcatgaccgt ggttggcaga gtaaaaccac
     3601 ccgccagacc acaggccgcc acgcagccgc cgtaattcat ttgcgccagc acttttgcca
     3661 gcactttgtc gccaacagtg tcaattgccc cagcccagac ttgtttttcc agaggacggg
     3721 attcggcaaa ctcatcacga gggagaatac ggctggcacc taaacttttc agatattcat
     3781 gggtactttc gcgaccggaa acggcaacga cctgataacc caacttatgc agcagcgcca
     3841 cggcggtact gccgacgcca ccactggcac ccgtcacgac aatctccccg tcctgcgggc
     3901 gaacaccggc atcttccagc gccatcacac acagcatggc ggtaaaaccg gcagtaccga
     3961 taattattgc tttacgcgcg tccagccctt gcggcatggc aaccagccag tcacctttca
     4021 ctcgcgcctg ctccgccagc ccaccccagt ggttttcacc aacgccccag ccagtgagta
     4081 acacctcctg accggcatga aaacgcggat cttcgctggt gcgtacagtt ccggcaaaat
     4141 cgatcccagg aatcatcgga aaattacgga tgatttttcc cttaccggta atcgccagcg
     4201 catctttata gttcaggctc gaccagtgaa catcgaccat gacatcgccc tccggcaggc
     4261 gactttcgtc cagagtctgt actgatgcga gagttttgcc gtcctgctgt tctaaaagta
     4321 acgcctgcat aagtggtcct catgtgcatg atggattgga aaataatttc tgaagattat
     4381 actcgctaat ggaaaagcaa agccgatgaa gcgcaataaa ttgcgagata aatctgattt
     4441 gctagtatgc ccgcttcctc actatcggag ttaacacaag gatgagatta acgacgaaat
     4501 tttcggcctt tgttacgctg ctcaccgggt taacaatttt tgtgactttg ctgggctgtt
     4561 cgctaagttt ctacaacgca attcagtata agtttagtca tcgcgttcag gcggtggcga
     4621 cggcgattga tacccacctt gtgtcgaatg acttcagcac attaaggcca caaattaccg
     4681 aattaatgat gtcggcagat atcgttcgtg tagacctgct ccatggtgat aaacaggttt
     4741 ataccctggc cagaaatggt agttatcgtc cggttggctc cagcgatctg tttcgtgaac
     4801 tgagcgttcc gttgataaag tatccgggga tgtcgctgcg tctggtttat caggatccga
     4861 tgggcaacta tttccattcg ttgatgacca ccgcgccgct cacgggggcg attagcttta
     4921 tcattgttat gctcttcttg gcggtacgct ggttacaacg gcaacttgcc gggcaagaat
     4981 tgctggaaac ccgggctact cgtatcttaa acggtgagcg tggctctaat gtgttgggaa
     5041 ccatctatga atggccgccc agaaccagca gtgcgctgga tacgctgctt cgtgaaattc
     5101 agaacgcacg cgaacaacac agccgtcttg atacgctgat ccgctcttat gccgcccagg
     5161 acgtgaaaac cggcctcaat aaccgactct ttttcgataa tcagttagca acgttactgg
     5221 aagatcagga gaaagtaggt acccacggga tcgtgatgat gattcgtctg ccggatttca
     5281 atatgttgag cgatacttgg gggcacagcc aggttgaaga acagttcttc actctgacga
     5341 atctgctgtc gacatttatg atgcgctacc ctggcgcact gctggcgcgt taccaccgca
     5401 gtgattttgc tgcgctgtta ccgcaccgga cgttaaaaga ggcagagagc atcgccggtc
     5461 agttaatcaa agccgtcgat accttgccga acaataaaat gctcgatcgc gacgatatga
     5521 tccacattgg tatctgcgcc tggcgtagtg gtcaggatac cgagcaggta atggaacatg
     5581 cagagtctgc cacgcgtaat gcgggattgc agggcggcaa tagctgggct atttacgatg
     5641 actcgttgcc tgaaaaagga cgcggtaatg ttcgctggcg tacgcttatc gagcaaatgc
     5701 tcagtcgcgg cggcccgcgc ctttatcaaa aaccggcggt tactcgcgaa ggtcaggttc
     5761 atcatcgcga actcatgtgc cgcatcttcg atggtaatga agaggttagc tcggcggagt
     5821 atatgccgat ggtcttgcag tttggcttat cggaagagta tgaccgtctg caaatcagcc
     5881 gtcttattcc actattgcgt tactggccag aggaaaatct ggcgattcag gttaccgttg
     5941 agtcgctgat tcgcccgcgt tttcagcgtt ggctgcgcga tacgttaatg caatgtgaaa
     6001 aatcacaacg aaaacgcata attattgaac ttgcagaggc cgatgtaggt caacatatca
     6061 gtcgtttaca acctgttatt cgtttagtga atgctttagg ggtacgggta gccgtcaacc
     6121 aggctggttt gacgctggta agcaccagtt ggatcaaaga acttaatgtt gagttactca
     6181 agctccatcc ggggctggtc agaaacattg agaagcgaac ggagaaccag ctgctggttc
     6241 aaagcctggt ggaagcctgc tccgggacca gcacccaggt ttacgccacc ggtgtgcgtt
     6301 cgcgaagcga gtggcagacc ctgattcagc gcggtgttac aggcgggcaa ggggattttt
     6361 tcgcgtcctc acagccactt gatactaacg tgaaaaaata ttcacaaaga tactcggttt
     6421 aacctgccgt ttaatccgtt ttcacgtaga ataacgcgcg ctgcgtctca tgggagtgtg
     6481 cttgtctgct cgccagattg ttgcagcaca tatgcagatg aatgacctta cgcggttgca
     6541 aacaggcgag gaatgctgct gatgcattaa gcctttctgg actcaggcag agatttgtaa
     6601 caaaggaaac gaactgcact aattttcacc gtagcagatg atttttgcgc cttgtcgctg
     6661 ctgcgtgtgg ttggtaaagt aagcggattt tcttttccgc cccagctttc aggattatcc
     6721 cttagtatgt tgaaaaaatt tcgtggcatg ttttccaatg acttgtccat tgacctgggt
     6781 actgcgaata ccctcattta tgtaaaagga caaggcatcg tattgaatga gccttccgtg
     6841 gtggccattc gtcaggatcg tgccggttca ccgaaaagcg tagctgcagt aggtcatgac
     6901 gcgaagcaga tgctgggccg tacgccgggc aatattgctg ccattcgccc aatgaaagac
     6961 ggcgttatcg ccgacttctt cgtgactgaa aaaatgctcc agcacttcat caaacaagtg
     7021 cacagcaaca actttatgcg tccaagcccg cgcgttctgg tttgtgtacc ggttggcgcg
     7081 acccaggttg aacgccgcgc aattcgtgaa tccgcgcagg gcgctggtgc ccgtgaagtc
     7141 ttcctgattg aagaaccgat ggctgccgca attggtgctg gcctgccggt ttctgaagcg
     7201 accggttcta tggtggttga tatcggtggt ggtaccactg aagttgctgt tatctccttg
     7261 aacggcgtgg tttactcctc ttccgtgcgc attggtggtg atcgtttcga cgaagctatc
     7321 atcaactatg tgcgtcgtaa ttacggttct ctgatcggtg aagccaccgc agaacgtatc
     7381 aagcacgaaa tcggttcggc ttacccgggc gatgaagtcc gtgaaatcga agttcgtggc
     7441 cgtaacctgg cagaaggtgt tccacgcggt tttaccctga actccaacga aatcctcgaa
     7501 gcactgcagg aaccgctgac cggtattgtg agcgcggtaa tggttgcact ggaacagtgc
     7561 ccgccggaac tggcttccga catctccgag cgcggcatgg tgctcaccgg tggtggcgca
     7621 ctgctgcgta accttgaccg tttgttaatg gaagaaaccg gcattccagt cgttgttgct
     7681 gaagacccgc tgacctgtgt ggcgcgcggt ggcggcaaag cgctggaaat gatcgacatg
     7741 cacggcggcg acctgttcag cgaagagtaa tcggatgcag gcaggggaaa tgtctgttta
     7801 ccctgcctag tctgatacga gaatacgcat aacttatgaa gccaattttt agccgtggcc
     7861 cgtcgctaca gattcgcctt attctggcgg tgctggtggc gctcggcatt attattgccg
     7921 acagccgcct ggggacgttc agtcaaatcc gtacttatat ggataccgcc gtcagtcctt
     7981 tctactttgt ttccaatgct cctcgtgaat tgctggatgg cgtatcgcag acgctggcct
     8041 cgcgtgacca actagaactt gaaaaccggg cgttacgtca ggaactgttg ctgaaaaaca
     8101 gtgaactgct gatgcttgga caatacaaac aggagaacgc gcgtctgcgc gagctgctgg
     8161 gttccccgct gcgtcaggat gagcagaaaa tggtgactca ggttatctcc acggttaacg
     8221 atccttatag cgatcaagtt gttatcgata aaggtagcgt taatggcgtt tatgaaggcc
     8281 agccggtcat cagcgacaaa ggtgttgttg gtcaggtggt ggccgtcgct aaactgacca
     8341 gtcgcgtgct gctgatttgt gatgcgaccc acgcgctgcc aatccaggtg ctgcgcaacg
     8401 atatccgcgt aattgcagcc ggtaacggtt gtacagatga tttgcagctt gagcatctgc
     8461 cagcgaatac ggatattcgt gttggtgatg tgctggtgac ctccggtctg ggcggtcgtt
     8521 tcccggaagg ctatccggtc gcggttgtct cttccgtaaa actcgatacc cagcgcgctt
     8581 atactgtgat tcaggcgcgt ccgactgcag gactgcaacg tttgcgttat ctgctgctgc
     8641 tgtggggcgc ggatcgtaac ggcgctaacc cgatgacgcc ggaagaggtg catcgtgttg
     8701 ctaatgaacg tctgatgcag atgatgccgc aggtattgcc ttcgccagac gcgatggggc
     8761 caaagttacc tgaaccgaca acggggatcg ctcagccgac tccgcagcaa ccgacgacag
     8821 gaaatgcagc tactgcgcct gctgctaatc gctctccaca aagggctacg ccgccgcaaa
     8881 gtggtgctca accgcctgcg cgtgcgccgg gagggcaata gtggcgagct atcgtagcca
     8941 gggacgttgg gtaatctggc tctctttcct cattgcgctg ttgctgcaaa tcatgccctg
     9001 gccggataac ctgattgttt tccggccaaa ctgggtgtta cttatcttgt tgtattggat
     9061 cctggccttg ccccatcgcg taaatgtggg cacaggtttt gtgatgggtg ccatactgga
     9121 tctgatcagc ggctcgacgc ttggcgtacg cgtattggcg atgagcatca ttgcttacct
     9181 ggtggcgctg aaataccagc ttttccgcaa cctcgcatta tggcagcagg cgctagtcgt
     9241 catgttgctt tcgctggtgg tggatattat tgttttctgg gcagagtttt tagtgattaa
     9301 cgtctctttc agaccggaag tgttctggag tagtgtagtc aatggggtgc tctggccgtg
     9361 gattttcttg ctgatgcgta aagtccgtca gcagtttgca gtgcaataaa ggtttctatg
     9421 acttctctgt atttagcttc cggttctccg cgtcgtcagg agttacttgc gcaacttggc
     9481 gtgacctttg aacgtattgt tacgggcatt gaggagcagc gtcagccgca ggagagcgcg
     9541 cagcagtatg ttgtgcgtct ggcacacaag aaagcacagg cgggtgtcgc gcaaacggcg
     9601 caggatctcc cggtgctggg tgcggatact atcgttatcc tgaatggaga agtgctggag
     9661 aaaccgcgcg acgcagagca tgcggcgcag atgttgcgca aattatcggg tcagacccat
     9721 caggtgatga cggcagtggt gttggccgac agccagcaca ttctcgattg cctggtggtc
     9781 accgatgtga ctttcagaac gttaacagac gaagacatcg cgggctatgt cgccagcggt
     9841 gaaccgttag ataaagcagg tgcatacggt attcaggggc tgggtggctg ttttgtcagg
     9901 aagataaatg gcagctatca cgccgtagtc ggcttaccgc tggttgaaac gtatgaatta
     9961 ttaagtaatt ttaacgcact gcgtgagaaa agggataaac atgacggctg aattgttagt
    10021 aaacgtaacg ccttcggaaa cgcgagtggc gtatattgat ggcggtattc tgcaggaaat
    10081 tcatattgaa cgtgaggcgc gacgcggaat agtaggcaat atctacaagg gtcgtgtaag
    10141 tcgtgtactt ccgggtatgc aggcggcttt tgtagatatt gggctggata aagccgcgtt
    10201 tcttcatgca tccgatatca tgccgcacac cgaatgtgtg gcgggtgaag aacaaaagca
    10261 attcacggtg cgcgacatct cggaactggt tcgtcagggg caagatctga tggtgcaggt
    10321 ggtgaaagat ccgcttggca ctaaaggtgc gcgcctgacc accgatatca cgctgccttc
    10381 tcgctatctg gtgtttatgc caggggcttc tcacgttggg gtttcccaac gtattgaaag
    10441 cgaatcagaa cgtgaacgcc tgaaaaaagt ggtcgcagag tattgcgacg agcagggcgg
    10501 gtttatcatc cgtaccgcag cggaaggggt tggcgaggct gaactggcct ccgatgccgc
    10561 ttatctgaaa cgcgtctgga ccaaagttat ggagcgtaaa aaacgcccgc agacccgtta
    10621 tcagctgtac ggcgaactgg cgctggcgca gcgtgttctg cgtgatttcg ccgacgccga
    10681 actggaccgc attcgcgttg actcacgcct gacttacgaa gcattgctgg agtttacctc
    10741 ggagtacatt cccgagatga ccagcaagct ggagcattac accggacgcc agccgatttt
    10801 cgatctcttt gatgtcgaaa acgaaatcca gcgagcgctg gaacgcaaag tagaactgaa
    10861 atccggtggt tatctgatta tcgaccagac cgaagcgatg accaccgtgg acatcaatac
    10921 cggagcgttt gtcggtcatc gcaatctgga cgacaccatt ttcaatacca atattgaagc
    10981 gacgcaggct atcgctcgcc agttacggtt gcgtaatctg ggtgggatta tcattattga
    11041 tttcatcgat atgaataatg aagatcaccg ccgccgcgtg ctgcactcgc tggagcaggc
    11101 gttgagcaaa gaccgggtga aaaccagcgt taatggtttt tcggcgctgg ggctggtgga
    11161 gatgacgcgt aaacgcaccc gcgaaagcat tgagcacgta ctgtgtaacg aatgcccaac
    11221 ctgccacggt cgcggaacgg tgaaaaccgt ggaaacggta tgctatgaaa tcatgcgcga
    11281 gattgttcgt gtccaccatg cttacgactc cgaccgtttc ctggtctatg cttctccggc
    11341 agtagctgaa gccttgaaag gcgaagagtc acactcgctg gcggaagtgg aaattttcgt
    11401 tggcaaacag gttaaagtac aaattgaacc gctctataac caggagcagt ttgacgtcgt
    11461 aatgatgtaa acagatgctg ggccgccatc cggcaaaggg tttttgagtc acatttttag
    11521 cagacaagga gtgacgggtg aggcgattgc cggggatttt actgcttact ggagccgcgc
    11581 tcgttgtgat cgcagccctg ctggttagcg gcctgcgtat tgctttaccg catcttgacg
    11641 cctggcgtcc ggaaatcctc aacaaaatag aatccgcgac tggcatgccg gtagaagcca
    11701 gtcagctctc agccagctgg cagaattttg gcccgacgct tgaagcacac gacatccgtg
    11761 cagaactaaa agatggcggc gaattttcgg ttaaacgcgt tactctggcg ctggatgtct
    11821 ggcagagctt gttacatatg cgctggcagt ttcgcgacct cactttctgg cagctgcgct
    11881 ttcgcaccaa cactcctatc accagcggtg gtggtaatga tagcctggaa gccagtcaca
    11941 tcagcgatct gtttcttcgt caatttgacc atttcgatct ccgcgacagt gaagtcagtt
    12001 ttctgacgcc atccggtcag cgcgccgagc tggcgatccc acaactcacc tggctgaacg
    12061 atccacgtcg acaccgtgcg gaaggcctgg taagcctctc cagccttacc ggacagcacg
    12121 gcgtgatgca ggtgcgcatg gatttgcgcg atgatgaggg gttgttaagc aatggtcgcg
    12181 tctggctaca ggcggatgac atcgacctga agccgtggct cggtaaatgg atgcaggaca
    12241 atattgctct ggaaacggca cagttctccc ttgaaggctg gatgacgatc gacaaaggcg
    12301 atgtaaccgg cggtgacgtc tggctgaaac agggcggtgc cagctggttg ggcgagaagc
    12361 aaacgcatac gctgtcggtg gataatctga ccgcgcatat tacgcgtgaa aatccgggct
    12421 ggcagttctc tattcccgat acacggatca cgatggacgg caaaccctgg ccgagcggag
    12481 cattgacgct ggcctggata ccggaacagg acgttggcgg caaagacaat aaacgcagtg
    12541 acgaactccg gattcgcgcc agtaatctgg agctggcagg cctggagggc atacgcccgc
    12601 tggccgcgaa actttcacct gcactgggtg atgtttggcg ctccacacaa ccgagcggca
    12661 agattaacac tctggcgctg gatatcccgc ttcaggcggc agacaagacc cgttttcagg
    12721 catcgtggag cgatctggcc tggaagcaat ggaaattatt accgggtgcg gaacacttct
    12781 ccgggacgct ttccggcagc gttgaaaatg gtttgcttac cgcgtcgatg aagcaggcaa
    12841 agatgcctta cgaaacggta ttccgtgcgc cactggaaat cgccgacggc caggcaacta
    12901 taagctggct gaacaatgac aaaggtttcc acctggatgg gcgtaatatt gacgttaaag
    12961 ccaaagctgt ccatgcgcgc ggcggttttc gttacctgca acctgctaac gatgaaccct
    13021 ggctgggtat tctggctggc atcagtaccg atgatggttc acaagcctgg cgctatttcc
    13081 cggaaaactt gatgggtaaa gacctagttg attacttaag tggcgcgatt cagggcggtg
    13141 aagcggataa cgcgacgctg gtttatggtg gcaatccgca actcttcccc tataaacaca
    13201 acgaaggtca gtttgaagtg ctggtgccgc tgcgtaacgc gaagtttgcc ttccagccgg
    13261 actggcctgc attaactaac cttgatattg aactggactt tattaacgac ggtttatgga
    13321 tgaaaaccga tgacgttaat ctgggcggcg tgcgcgcgag taatctcacc gcagtgatcc
    13381 ctgactactc gaaagaaaaa ctgctgattg acgctgacat taaaggtccg ggtaaagccg
    13441 ttggccctta ctttgatgag acaccgctga aagattctct gggtgcgacc ctgcaagaac
    13501 tccagctcga cggcgatgtg aatgctcgct tacatcttga tatcccgctg aacggcgaac
    13561 tggtaaccgc gaaaggtgaa gtgacgctgc gtaataacag tctgtttatc aaactactcg
    13621 acagcaccct gaaaaatttg agcggtaaat tcagctttat caatggcgat ctgcaaagtg
    13681 aaccactgac agcaagctgg tttaatcagc cgttgaacgt ggatttttcc accaaagaag
    13741 gggcaaaagc ctaccaggtt gcggtaaacc tcaacggtaa ctggcaaccg gcgaaaaccg
    13801 gcgttctgcc tgcagcggtg aacgaagcat tgagtggcag cgtggcgtgg gatggtaaag
    13861 tgggcattga tctgccttat catgctggcg cgacctataa cgtagagctg aacggcgatc
    13921 tgaataatgt gagcagtcac ttaccttcac cgttagccaa acctgcgggt gaaccactgc
    13981 cggtaaacgt taaggttgat ggcaatctca gcagctttga attaaccgga caggctggtg
    14041 cggataacca tttcaatagc cgctggttgc ttggtcaaaa gctgacgctc gatcgtgcta
    14101 tttgggcggc agacagtaaa acgctcccgc cgttgccgga acaaagtggc gttgaactca
    14161 atatgccgcc gatgaatggt gccgagtggc tggccctgtt ccagaaaggc gctgcggaga
    14221 gtgtcggtgg tgcagcgagt ttcccacaac acataacgtt acgtacgcct atgttgtcac
    14281 tgggaaatca gcaatggaat aacctgagta ttgtttcgca accgacggca aatggcaccc
    14341 tggttgaggc gcaggggcgt gaaatcaatg ccacgctggc gatgcgtaat aacgcgccgt
    14401 ggctggcgaa tatcaaatat ctttattaca acccgagcgt ggcgaaaact cgtggtgatt
    14461 caacaccgtc atcacctttc ccgacaacgg agcgcattaa cttccgtggc tggccggacg
    14521 cacaaatacg atgcacagag tgctggttct gggggcaaaa attcggtcgt attgacagtg
    14581 atctcaccat ttctggcgat acgttaacgc tgaccaatgg actgattgat actggtttct
    14641 cgcggcttac tgccgatggt gaatgggtta ataatccggg gaatgaacgt acctcgctga
    14701 aaggaaaact gcgcgggcag aaaattgatg ccgccgcaga attttttggt gtcacgacgc
    14761 ccatacgcca gtcgtcattt aatgtggatt acgatttaca ctggcgcaaa gcaccctggc
    14821 aaccagatga ggcgacgttg aatggcatca ttcatactca actgggtaaa ggcgaaatta
    14881 ccgaaatcaa taccggacat gccgggcaat tgctgcgctt attgagcgtt gatgccctga
    14941 tgcgtaagct gcgttttgat ttcagagaca cttttggcga agggttctat tttgactcca
    15001 ttcgcagcac cgcgtggatt aaagacggcg ttatgcacac cgacgacacg ctggtggatg
    15061 gcctggaggc ggatatcgcc atgaaagggt cggtaaatct ggtacgtcgc gacctgaata
    15121 tggaagcggt tgtcgcacca gagatttctg cgacggtggg cgtggctgcg gcttttgcgg
    15181 ttaaccccat tgttggcgcg gcagtatttg cagccagtaa agtgctgggg ccgctgtgga
    15241 gcaaagtctc cattttgcgc tatcacattt cgggtccgct ggacgatccg caaatcaacg
    15301 aagtgttgcg ccaaccgcgt aaagaaaaag cgcaatgatt tgacgagggc gcgtaattgc
    15361 cccaatctca tatgataatc gttgccaaag gccaacgagc cagaacataa ccgtaggtcg
    15421 gatagggcgt tcacgccgca tccggcagcc gtaaaaaatc ctctactgca gtaactaacg
    15481 agtagcaaaa acgatgagtc ttaacctagt aagtgaacaa ttgctagcgg cgaacggcct
    15541 gaaacatcag gacttgttcg cgatcctcgg tcaactggcc gaacgtcgcc ttgattatgg
    15601 cgatctctat tttcagtcga gctatcacga atcctgggtt ttagaagacc gcattattaa
    15661 agatggttct tacaacatcg atcagggcgt tggcgtgcgt gcaatcagcg gtgaaaaaac
    15721 cggatttgct tacgctgacc aaatcagcct gctggcgctg gaacagagtg cgcaagcggc
    15781 gcgcaccatc gtccgtgata gtggtgatgg caaagtacag acgctgggcg cggtagggca
    15841 tagcccgttg tatacctcgg tagatccgct gcaaagcatg agccgtgaag agaagctgga
    15901 tatcctgcgt cgcgtcgata aggttgctcg cgaagcggac aagcgcgtac aggaagtgac
    15961 tgccagcctc agtggtgtct atgaattaat tctggttgcg gccaccgacg gcacgctagc
    16021 ggcggatgtc cgtccgctgg tgcgtctttc cgtgagcgtt ctggtcgaag aagatggcaa
    16081 acgcgaacgc ggtgccagtg gcggtggcgg tcgttttggt tatgagttct tccttgccga
    16141 tcttgacggc gaagtccgtg cggatgcatg ggcaaaagaa gcagtgcgta tggcgctggt
    16201 caatctttct gccgttgctg caccagcggg caccatgccg gtagtacttg gcgcaggttg
    16261 gccgggcgtg ctgttgcatg aagcggtagg tcacggtctg gaaggcgact tcaaccgccg
    16321 cggcacttca gtatttagtg ggcaggtcgg ggagctggtg gcttcagaac tgtgtaccgt
    16381 ggttgatgac ggcacgatgg tcgatcgccg tggttcggtg gcgattgatg acgaaggtac
    16441 gccaggccag tacaacgtgc tgattgagaa cggcattctg aaaggctaca tgcaggataa
    16501 actcaacgcg cgtttgatgg ggatgacgcc gactggcaac ggtcgccgtg aatcctacgc
    16561 ccatctgccc atgccgcgta tgaccaacac ctatatgctg ccgggtaaat cgaccccgca
    16621 ggaaattatt gaatccgttg agtacggtat ctatgcaccg aactttggtg gcggtcaggt
    16681 ggatatcacc tccggcaaat tcgttttctc cacttcagaa gcatatctga ttgaaaacgg
    16741 taaagtaacg aagccggtga gaggcgcaac gttgattggt tccggtatcg aaaccatgca
    16801 gcagatttcg atggttggca acgacctgaa actggataac ggcgtgggtg tctgcggtaa
    16861 agaagggcaa agtttgccgg ttggcgtggg ccagccaacg ctgaaagttg ataacctgac
    16921 tgttggcggt actgcgtaat aatttcatta ttttcagaag gataattaat ctttctacgt
    16981 gcacgaacgg tcccctcgct cctctggggt tagggtgagg ggaacccgtt ggcacaggtt
    17041 tgtagaacgt aacagtacaa tatgaattac ttctctttcc cgcgcccgtg catctcctga
    17101 aacaatttac cgacctcaac aaaataatcc gtcagcgagt tgatcacgac ctgtaccttc
    17161 agcggcagct tatctttttc ggtatataac gcataaaccg ggcgtggatc tgactgataa
    17221 cgcggcagca ggatctccag ctccccacga ttgatctcgt tgatcaccca catcagcggc
    17281 acgtaggcga tcccggcacc cgccgttagc cagcgcacca gcgtcatcgg atcattagtc
    17341 acaaatctcc cttgcgggat caggcgagtc gagatccctt ccggtgcaat cagttcaaat
    17401 tcattgtcgg gccgcacgct gtattcaagc catgaatggc tacttaaatc ggcgggtttt
    17461 tccggtatgc cgtattgtgt gagatagctt ttcgcggcgc acaccaccat tggcatcgcg
    17521 ccaagacggc gggaaaacag gctggaatcc tgcaacgcgc cgacgcggat caccacatcc
    17581 agaccgtcgg caatcaggtc gggggctgga attccggtaa ccagattgac gctcaaacct
    17641 gggtattctt tcagcatttt ggctgtcagc ccggcgagaa cattttgtgc catagttgaa
    17701 gaacagccaa tgcgtagcgt cccgatgggg gtgttattga aagcatacag ttgctcatga
    17761 acatcctgca cttcatgaag catacgacgg cagccctggt agtaaattct accggcttcg
    17821 gtcaggccaa tgctgcgtgt gctacggttt aacagcttta cctgcaactc atcttccagt
    17881 tttgacaccg tctgactgat ggacgaaacg ctcatctgta gctgtctggc ggcggcggta
    17941 aaagagccaa attcaactac tttggcaaac accgacatgc gttttagtcg ttccattatt
    18001 cactctgact taaaagtgat ttagatcaca taat
//
LOCUS       DADMIB010000079        17935 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.079, whole genome shotgun sequence.
ACCESSION   DADMIB010000079 DADMIB010000000
VERSION     DADMIB010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17935)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17935)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17935
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.079"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..118)
                     /locus_tag="JNZ89_002467"
     CDS             complement(<1..118)
                     /locus_tag="JNZ89_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY8936319.1"
                     /translation="MKRKVLAMLVPALLVAGAANAAEIYNKDGNKVDFYGKMV"
     gene            679..1044
                     /locus_tag="JNZ89_002468"
     CDS             679..1044
                     /locus_tag="JNZ89_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY8936320.1"
                     /translation="MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALW
                     AFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGAL
                     LGSIAWYTRPRPARSRRYE"
     gene            1084..1788
                     /locus_tag="JNZ89_002469"
     CDS             1084..1788
                     /locus_tag="JNZ89_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HAY8936321.1"
                     /translation="MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADD
                     DVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCH
                     VIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQ
                     HRPLDDKRYALDHFQTKLLKLPQTMQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGE
                     NEGVDHKVIDAFSPAG"
     gene            1855..3273
                     /locus_tag="JNZ89_002470"
     CDS             1855..3273
                     /locus_tag="JNZ89_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HAY8936322.1"
                     /translation="MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENH
                     WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRG
                     FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEH
                     IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP
                     AMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR
                     ERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR
                     YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMAKGEKDFDDP
                     LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL
                     EPKIKQAVALRQQEAQHGRRSR"
     gene            3254..3724
                     /locus_tag="JNZ89_002471"
     CDS             3254..3724
                     /locus_tag="JNZ89_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HAY8936323.1"
                     /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA
                     SLPGSPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS
                     RLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA"
     gene            complement(3713..4633)
                     /gene="yedA"
                     /locus_tag="JNZ89_002472"
     CDS             complement(3713..4633)
                     /gene="yedA"
                     /locus_tag="JNZ89_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HAY8936324.1"
                     /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF
                     LAAGILLMAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV
                     VATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI
                     SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL
                     ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI
                     VFAVVLVTLGKYLFPAKPVVAPVIQDASSE"
     gene            4806..5723
                     /locus_tag="JNZ89_002473"
     CDS             4806..5723
                     /locus_tag="JNZ89_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HAY8936325.1"
                     /translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN
                     AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF
                     EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDPLKFEKDKIKGAIRTDFILSAEIVA
                     ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG
                     KGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPT
                     VLNLILGFIIGGIVVLGVKAVAKIRGQAH"
     gene            5802..5984
                     /locus_tag="JNZ89_002474"
     CDS             5802..5984
                     /locus_tag="JNZ89_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2158 domain-containing protein"
                     /protein_id="HAY8936326.1"
                     /translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH
                     ETELVPGEGSRSAEEV"
     gene            6155..7849
                     /gene="yedQ"
                     /locus_tag="JNZ89_002475"
                     /pseudo
     CDS             6155..7849
                     /gene="yedQ"
                     /locus_tag="JNZ89_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310721.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis regulator YedQ"
     gene            complement(7846..8661)
                     /locus_tag="JNZ89_002476"
                     /pseudo
     CDS             complement(7846..8661)
                     /locus_tag="JNZ89_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310720.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate phosphatase-related
                     protein"
     gene            complement(8959..9175)
                     /gene="yodD"
                     /locus_tag="JNZ89_002477"
                     /pseudo
     CDS             complement(8959..9175)
                     /gene="yodD"
                     /locus_tag="JNZ89_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416463.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid resistance protein YodD"
     gene            9284..9526
                     /gene="dsrB"
                     /locus_tag="JNZ89_002478"
     CDS             9284..9526
                     /gene="dsrB"
                     /locus_tag="JNZ89_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein DsrB"
                     /protein_id="HAY8936327.1"
                     /translation="MPEKRNCSTLAQSHRRKTMKVNDRVTVKTDGGPRRPGVVLAVEE
                     FSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE"
     gene            complement(9570..10193)
                     /gene="rcsA"
                     /locus_tag="JNZ89_002479"
     CDS             complement(9570..10193)
                     /gene="rcsA"
                     /locus_tag="JNZ89_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsA"
                     /protein_id="HAY8936328.1"
                     /translation="MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD
                     SQRPSVVFINEDCFIHDASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL
                     ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD
                     QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR"
     gene            complement(10478..11263)
                     /gene="fliR"
                     /locus_tag="JNZ89_002480"
     CDS             complement(10478..11263)
                     /gene="fliR"
                     /locus_tag="JNZ89_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HAY8936329.1"
                     /translation="MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKL
                     GLAMMITFVIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEII
                     GLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIG
                     GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGF
                     PLTLTVGISLMAALMPLIAPFCEHLFSEMFNLLADIISELPLI"
     gene            complement(11272..11541)
                     /gene="fliQ"
                     /locus_tag="JNZ89_002481"
     CDS             complement(11272..11541)
                     /gene="fliQ"
                     /locus_tag="JNZ89_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013365797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HAY8936330.1"
                     /translation="MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQI
                     NEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG"
     gene            complement(11551..12287)
                     /gene="fliP"
                     /locus_tag="JNZ89_002482"
                     /pseudo
     CDS             complement(11551..12287)
                     /gene="fliP"
                     /locus_tag="JNZ89_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310714.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly.; frameshifted; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
     gene            complement(12287..12652)
                     /gene="fliO"
                     /locus_tag="JNZ89_002483"
     CDS             complement(12287..12652)
                     /gene="fliO"
                     /locus_tag="JNZ89_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliO"
                     /protein_id="HAY8936331.1"
                     /translation="MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWQVKRLGF
                     APKRTGVNGLKISASASLGARERVVVVYVEDARLVLGVTAGQINLLHKLPPSAPTEEI
                     PQTDFQSVMKNLLKRSGRS"
     gene            complement(12655..13068)
                     /gene="fliN"
                     /locus_tag="JNZ89_002484"
     CDS             complement(12655..13068)
                     /gene="fliN"
                     /locus_tag="JNZ89_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HAY8936332.1"
                     /translation="MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGG
                     GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
                     GYLIAQGEVVVVADKYGVRITDIITPSERMHRLSR"
     gene            complement(13065..14069)
                     /gene="fliM"
                     /locus_tag="JNZ89_002485"
     CDS             complement(13065..14069)
                     /gene="fliM"
                     /locus_tag="JNZ89_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HAY8936333.1"
                     /translation="MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQR
                     RVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL
                     NLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL
                     ALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC
                     LPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQIL
                     KLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK
                     "
     gene            complement(14074..14538)
                     /gene="fliL"
                     /locus_tag="JNZ89_002486"
     CDS             complement(14074..14538)
                     /gene="fliL"
                     /locus_tag="JNZ89_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HAY8936334.1"
                     /translation="MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADD
                     KAQQRVVPSPVFYALNTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLL
                     LLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR"
     gene            complement(14643..15770)
                     /gene="fliK"
                     /locus_tag="JNZ89_002487"
     CDS             complement(14643..15770)
                     /gene="fliK"
                     /locus_tag="JNZ89_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook length control protein FliK"
                     /protein_id="HAY8936335.1"
                     /translation="MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTD
                     KAAPQLLVATDKPTTKGEPLISDILADAQQADLLIPVDETLPVINDEQSTSTPLTTAQ
                     TMTLAAVADQNTTKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDVPSTVLPAEKP
                     TLFTKLTSAQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPH
                     QTQPLPTVAAPVLSAPLGSHEWQQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLK
                     VDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNISGESFSGQQQAASQ
                     QQQSQRTVNHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA"
     gene            complement(15767..16210)
                     /gene="fliJ"
                     /locus_tag="JNZ89_002488"
     CDS             complement(15767..16210)
                     /gene="fliJ"
                     /locus_tag="JNZ89_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FliJ"
                     /protein_id="HAY8936336.1"
                     /translation="MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLID
                     YQNEYRNNLNSDMSAGMTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWR
                     EKKQRLQAWQTLQERLSTAALLAENRLDQKKMDEFAQRAAMRKPE"
     gene            complement(16229..17597)
                     /gene="fliI"
                     /locus_tag="JNZ89_002489"
                     /pseudo
     CDS             complement(16229..17597)
                     /gene="fliI"
                     /locus_tag="JNZ89_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416451.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
     gene            complement(17597..>17935)
                     /gene="fliH"
                     /locus_tag="JNZ89_002490"
     CDS             complement(17597..>17935)
                     /gene="fliH"
                     /locus_tag="JNZ89_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707825.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HAY8936337.1"
                     /translation="ASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
                     PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQE
                     LCRLAAPGVV"
BASE COUNT         4402 a         4489 c         4718 g         4326 t
ORIGIN      
        1 caaccatctt gccgtagaaa tcaactttat tgccatcttt attgtaaatt tcagccgcat
       61 ttgctgcgcc agcaactaat aacgccggga ccagcattgc cagaactttt cttttcatta
      121 tgtattccct tgtgattata atcttcatga atatatcaat aagtgccgtt atccaaaaaa
      181 aagcacattt ggatactatt ctatgaagtt catttcattt taagtattac atgcaacaaa
      241 tgtatttaaa agatttcaaa atgtttctaa tctatttaat ataattcaga gatatgaatt
      301 ataaatattc atgaaaatta taaatgtata tcaatatgtt atgagttgag cggaaacata
      361 gggggtatca atgattgttg cgccaaacgg ctggtgtgat caggcgcaca ttaatgaagg
      421 cataaaaaaa agccggcatc atgccggccc aaaaaatata aacaagacga taaaaggcta
      481 ataacggaag catcatgaca cagaataata aaaaggtata attgtaatca gtgctaatat
      541 attgattaaa tgaattaata aagccgatat caaagataaa taaaatcgct caaaacgatt
      601 tttcctgtat tcactgccgt tgcgcaaaat ttatctattt gttcaaaaaa tgattgagtc
      661 ttgactggct catccaatgt ggaaaaatgt gacttttatc acataatagt gctaagtctg
      721 aattttccgg gttatctcaa aatggaatac ggttcgacaa agatggaaga gagactctct
      781 cgcagccctg gcggcaaact ggctttgtgg gctttctata catggtgtgg ctatttcgtc
      841 tgggcaatgg cgcgttacat ctgggtgatg agccggatcc ccgatgcccc cgtgtcggga
      901 tttgaaagcg atttaggctc taccgcggga aagtggttag gggcactggt cggattttta
      961 tttatggctc tggtcggggc attgttaggc agcattgcct ggtacacccg acctcgtccc
     1021 gcacgtagca gacgctatga ataaaaactg ctaaggtggc gactctttgg caacggagcg
     1081 cgtatggact tacaacactg gcaggcacag ttcgaaaact ggttgaaaaa ccatcatcag
     1141 caccaggacg cggcccatga cgtgtgtcat tttcgccgcg tctgggctac ggcacagaag
     1201 ctggcggcag atgacgatgt cgatatgctg gtgattttaa ccgcctgtta ttttcacgat
     1261 attgtgagcc tggcgaaaaa tcatccgcaa aggcagcgtt cttcaatcct ggcggcagaa
     1321 gagacgcgtc gcctgctccg tgaagagttc gagcaatttc cggcggagaa aatcgaggcc
     1381 gtttgtcatg tcattgccgc tcacagtttc agcgcgcaaa tcgccccctt aacaacggaa
     1441 gctaaaatcg tccaggatgc ggatcggctg gaagccctgg gggcgattgg cctggcgcgc
     1501 gtgtttgccg tttcaggggc attgggcgtg gcgctgtttg atggtgaaga tccgttcgca
     1561 cagcatcgcc cgcttgatga taaacgctac gcgctggatc atttccagac taagttgctg
     1621 aagctaccgc aaaccatgca aaccatgcaa accgcaagag gcaagcagct ggcgcagcac
     1681 aacgcgcatt ttttagtcga gtttatggcg aagctcagtg ccgaactggc gggggagaat
     1741 gaaggtgtcg atcacaaggt gatagatgcg ttttcacccg cgggataagc gcgtggccct
     1801 aaatggctgt aattatgtta acctgtcggc catctcagat ggccggttaa atctatgcag
     1861 gaaaatatat cagtaaccga ttcatacagc accgggaatg ccgcacaggc aatgctggag
     1921 aaactgctgc aaatttatga tgttaaaacg ctggtggcgc agcttaatgg tgtgggtgag
     1981 aatcactgga gcgcggcaat tttaaaacgt gcgctggcga atgactcggc atggcaccgt
     2041 ttaagtgaga aagagttcgc ccatctgcaa acgttgttac ccaaaccacc ggcacatcat
     2101 ccgcattatg cgtttcgctt tatcgatcta tttgccggaa ttggcggcat ccgtcgcggt
     2161 tttgaatcga ttggcggaca atgcgtgttt accagcgaat ggaacaaaca tgcggtacgc
     2221 acttataaag ccaaccatta ttgcgatccg gcgacgcatc attttaatga agatatccgc
     2281 gatatcaccc tcagccataa agaaggcgtg agtgatgagg cggcggcgga acatattcgt
     2341 caacacattc ctgaacacga tgttttactg gccggtttcc cttgtcagcc attttcgctg
     2401 gctggcgtat cgaaaaagaa ctcgctcggg cgggcgcacg gttttgcctg cgatacccag
     2461 ggcacgctgt tttttgatgt ggtacgcatt atcgacgcgc gtcgtccggc gatgtttgtg
     2521 ctcgaaaacg tcaaaaacct gaaaagtcac gaccagggta aaacgttccg catcatcatg
     2581 cagacgctgg acgaactggg ctatgacgtg gctgatgcag aagataacgg gccggacgat
     2641 ccgaaaatca tcgatggtaa acattttctg ccgcagcacc gtgaacgcat cgtgctggtg
     2701 ggttttcgtc gcgatcttaa tctgaaagcc gattttactc tgcgtgatat cagcgaatgt
     2761 ttccctgcac agcgagtgac gctggcgcag ctgttggacc cgatggtcga ggcgaaatat
     2821 atcctgacgc cggtgctgtg gaagtacctc tatcgatatg cgaaaaaaca tcaggcgcgc
     2881 ggtaacggct tcggttatgg aatggtttat ccgaacaatc cgcaaagcgt cacgcgtacg
     2941 ctgtctgcgc gttattacaa agatggcgcg gaaattttaa tcgatcgcgg ctgggatatg
     3001 gccaaaggtg agaaagactt tgacgatccg ctgaatcagc aacatcgtcc acgtcggtta
     3061 acgcctcggg aatgcgcgcg cttaatgggt tttgaagcgc cgggagaagc gaaattccgc
     3121 attccggttt cggacactca ggcctatcgc cagttcggta actcggtggt cgtgccggtc
     3181 tttgccgcgg tggcaaaact gcttgagcca aaaatcaaac aggcggtggc gttgcgtcag
     3241 caagaggcac aacatggccg acgttcacga taaggccact cgcagcaaaa atatgcgcgc
     3301 gattgccacg cgtgatacgg cgattgagaa gcgcctcgcc agtctgttaa ccgggcaggg
     3361 cctggcgttt cgcgttcagg acgccagtct gcccggaagc ccggattttg tcgttgatga
     3421 atatcgctgc gtgatattta cccatggctg cttctggcat catcatcact gctatctgtt
     3481 taaagtgcct gcgactcgaa ccgagttctg gctggagaag ataggtaaaa atgttgaacg
     3541 cgatcgccgc gatatcagtc gtttgcagga actcggctgg cgcgtactga ttgtctggga
     3601 gtgtgcatta cgtgggcgcg agaagctgac ggatgaagcg cttaccgagc gtctggaaga
     3661 gtggatctgc ggcgaaggtg ccagcgcgca gatcgacacg caggggattc atttactcgc
     3721 ttgatgcgtc ctgaataact ggcgcaacta cgggttttgc cgggaagaga tattttccca
     3781 acgtgaccag taccaccgcg aagacaatta cgccgagcgc cagccattca atcttcgaca
     3841 gcgtctctcc gcccagtccc gtacccagca agaccgcgac caccgggtta acgtaggcgt
     3901 agctggtggc gagagccgga ctgacattac ggattaaata catataagcg ttgatggcga
     3961 taatcgaacc aaacagcgcc agatagccga ccgcaaggaa gcctgaaagg gaagggagcg
     4021 ccgtcagttt ttcacctgca atcatcgacg cgatcattaa caccacgcct gccgccagca
     4081 tctcaatcgc acccgccatc atccctacag gtaaggtaat gcgcgagcca taaaccgagc
     4141 caaacgccca gctaatcgag ccgattaaaa tcagaatcgc gccccacgga ttgccgctta
     4201 aatttccacc gctattgagc atgatgattc cggcaagccc aatggcgata cccacccatt
     4261 ccaatttgcg cgttttaatg ccaaacaggc ggctgaagca cagggtaaag aggggcacgg
     4321 ttgcaaccac aacggcggcg atgccggaag gaacattttg atgctcggca accgtcacca
     4381 tgccattacc gacagccagc aataacaggc caatcagcgc ggcattgagc agcggacgta
     4441 gcggggggag cttgtgtccg cgcagtagca aaaatgccat caataaaata ccggctgcca
     4501 ggaatcgaac gcctgccatc attaacggag gccagctttc cacgccaatc cgaatgacaa
     4561 aataggttga gccccaaatg atatacaacg caaacagcgc gccaaaaagc ggtaacaact
     4621 ggcggaaacg cataatccct cacggtggaa ataaaaaggt ggttcatagt aaacgtgaaa
     4681 atcattctgc tggcgagaga tataattgca cttgattgtt aaaaaaatgt tgacctgtga
     4741 agcaagtatc agagctgccg tttttgcttc atacttacac ccttcaacaa taaaaatgag
     4801 agggaatgct tttggccggg agtagtttac tgacgttgct cgatgatatc gccacactac
     4861 tggacgatat ctccgtgatg ggcaaactgg cggcgaagaa aaccgccggt gtattagggg
     4921 atgacttatc gctcaatgcg caacaagttt caggcgtgcg ggccaaccgg gaacttcccg
     4981 tggtctgggg cgtggcgaaa ggatcgctga ttaataaagt gattctggtg ccgctggcgc
     5041 tgatcatcag tgcgtttatc ccgtgggcga ttacgcctct gttgatgatt ggtggcgcgt
     5101 ttctctgctt tgaaggagta gagaaagtgc tgcatatgct ggaggcgcgt aaacataaag
     5161 aagatccggc gcagagccag cagcgtctgg agaagctggc ggcgcaggat ccgctgaagt
     5221 ttgaaaagga caaaataaaa ggggcgattc gtaccgattt tatattgtct gccgaaatcg
     5281 tcgccatcac gctggggatt gtggccgaag cgccgttgct taatcaggtg ctggtgcttt
     5341 caggcatcgc gctggtagtg accgtgggcg tctacggtct ggtaggggtt atcgttaaga
     5401 ttgatgacct ggggtattgg ctggcggaaa aatccagcgc gctgatgcag gcattaggta
     5461 aagggttatt gatcattgcg ccctggctga tgaaagcgtt atcgattgtc ggcacgctgg
     5521 cgatgttcct cgtcggcggc gggattgtgg tacatggtat tgcgccgctg catcacgcca
     5581 ttgaacattt cgccgggcag caaagtgcag tggtggcgat gatattaccg actgttttaa
     5641 atctgattct tggatttatc atcggcggca tcgtggtgct gggagtgaaa gccgtagcga
     5701 aaatacgcgg tcaggcacat taatactcgc acaggctatt atgcaaaatt cgccatcttc
     5761 aactaaggtg aacaagtttc actcgaaaaa aggaggcgag tatgagcttt atggttagtg
     5821 aggaagttac ggttaaagag ggcggcccgc ggatgattgt caccggatac tccagcggta
     5881 tggttgagtg tcgttggtat gacggttacg gggtcaagcg ggaagctttt catgaaaccg
     5941 agcttgttcc gggggagggg agtcgttctg cggaagaagt ttgaaagggt atcattaaca
     6001 ccaggccgga tcacttccgg cctggtgtgc caatgcctgc aatgaatgat agtcgcgtct
     6061 tatcatgcca ccattataaa attatcgctg ttttgcggta cgctatcgcc aggttatgcc
     6121 agaatcataa aaaagcaggt tgggagtcgt cagggtgcag cacgagacaa aaatggaaaa
     6181 ccagagctgg ttgaaaaaaa tcgcacgccg cctggggcct ggtcatgtcg ttaatctctg
     6241 ctttatcgtg gtattgcttt tttccacctt gctgacctgg cgtgaagtgg tagtgctgga
     6301 agatgcctat atctccagtc agcgtaatca tctggaaaac gtagccaacg cgctcgataa
     6361 gcatttgcag tataacgtcg acaaactgat ctttttgcgt aatggcatgc gcgaagctct
     6421 cgtagcgcca ctggatttca cttcactgcg taatgctgta accgagttcg aacagcatcg
     6481 cgacgagcac gcctggcaaa ttgaactcaa ccgacgacgc accctgtcag tcaatggcgt
     6541 atcggatgca ttagtcagcg aggggaatct cctgtctcgc gaaaatgaaa gcctcgacaa
     6601 tgaaattacc gctgcactgg aagttggtta cttgctgcga ctggcgcaca acacctcgtc
     6661 gatggttgaa caggcgatgt atgtctcgcg tgccggattt tacgtttcga cgcagccgac
     6721 cttgtttacg cgcaatgtac caacgcgtta ttacggctat gtcacccaac cctggtttat
     6781 cggccattcg caatgagaaa atcgtcaccg cgcggtacgc tggtttactt cgcaaccgga
     6841 acacgccagc aatactgaac cgcaggttac cgtcagtgtt ccggtagaca gtaataacta
     6901 ctggtatggc gtgctgggga tgagtattcc cgtgcgtacc atgcagcaat ttttaagaaa
     6961 cgccatcgat aaaaacctcg atggtgagta tcagctctat gacagtaagc tgagattttt
     7021 gacctcttcc aatcctgacc atccaacagg gaatattttt gatcctcgtg aactggcctt
     7081 gctggcgcag gcgatggaac atgacacgcg gggcggcatt cgtatggaca gtcgctatgt
     7141 tagctgggaa cgtctggacc atttcgacgg tgtgctggtg cgcgtccata cgctaagcga
     7201 aggcgtgcgc ggcgatttcg gcagtatcag cattgcatta accctgctgt gggcgctctt
     7261 taccaccatg ttactcatct cctggtatgt gattcgccgg atggttagca acatgtatgt
     7321 tctgcaaagc tcgttgcagt ggcaggcgtg gcacgacacc ttaacccgtt tatataatcg
     7381 tggcgcactg tttgaaaaag ctcgtccgct cgcgaaattg tgtcagacgc accaacatcc
     7441 tttttctgtc attcaggtcg accttgacca ttttaaagcg attaatgacc gctttagtca
     7501 tcaggcgggc gaccgtgttc tttctcatgc tgccggatta attagcagtt ccttgcgtgc
     7561 gcaggacgtt gccgggcggg tcggtggtga ggagttttgt gtgattctgc caggcgcgag
     7621 tctgacggag gctgcggaag tcgcagaacg tattcgcctg aagttaaatg aaaaagagat
     7681 gttgattgct aagagtacga cgatacgcat cagtgcctcg ttgggggtaa gtagcagcga
     7741 ggaagccggt gattatgatt ttgaacaact ccagtcactg gctgaccgtc ggctttatct
     7801 cgctaaacag gccgggcgta atcgggtatg cgcgagcgat aacgcttaac gagcggagaa
     7861 aaaatggtcc agcccttcac gccatccttc cggtccttca cgctgcgttc gccagacgcg
     7921 ggccggatcc tcatcatgca gatgcacccc ttcacggttt agccctttca caatcaccgc
     7981 gtaatccatt acctccagta agggcgcatc gtttggccca tcgcccaggc caagtgtggt
     8041 tgggcgtttg cctgataatt gttgataggt cgcgataatc cagttggcgg cctgatcttt
     8101 tccggcagag gcatccagga cgtgccagaa gcgcgcaccc tgcataaact gtaagcccag
     8161 ttcgttcaga cgagcggtaa attgtgccat acgctcgtca ctgtcgcgcc agattagcgt
     8221 taccgacgcc tcatgcagct gcgtcagcgc cgcctggcta cggcttaatc ccgtccattc
     8281 ggcgatggtt gcatcgtcga catcatcgaa agtcgtgaat ttaaaatgtt ctttctcgcg
     8341 tagcgtattt aaaacctggc tgatttcgcc atggctaata cctgagatga tgcgtggaaa
     8401 accgtctata tcctgccatt gttcagcaag ctggatcact gcgccatttt cggcaatcag
     8461 tggtacccct tgtaacccca acgttttttg caagtacagc atttccgctg aagttttact
     8521 gctacagaga atgacgggaa cattcgcttc gcgtaaacgg ctgagctagg gggcagccgg
     8581 ttgccagtca taactatgac tgtccagcag ggtgccatca agatcgctaa aaaccagtag
     8641 tggttgttga attgaaaaca tggtcgcgca gttctcccct taccaggatg attctcaaaa
     8701 cagcacaaat aatcaaagat gattttttcg ggagcgatcc cgttgacgcc agagccacca
     8761 aggggtgacg cacgtcacat ttctattcat aagtagcgtt aatcattcat atcgcgaata
     8821 ttttcttgtc agcgaaaaaa attgcggata aggtgatgaa cacatcagat ttcctggtgt
     8881 aacgaatttt ttaagtgctt cttgcttaag caagtttcat cccgaccccc tcagggtcgg
     8941 gattttttta ttgtgcattc aacgattcac ttcagagacg ctgaagtcat gaatatccag
     9001 ttcgaaggca tccgccaatt cacgccatgt atgatattca cgtccatcga cgctaacgtg
     9061 ttcagaatcg ttctggctgc gatgaactta tttcattgat cgccgccagc agggcatcga
     9121 catcgacgct gacctcacgt tttgcggtat cgctgtactc ttttgcggtt ttcatcatct
     9181 ttcctcgcaa ccgttactct gttgttgccg ccagtcgtta agtccgcctg gcatctctta
     9241 agtatagacc gtcgagaaaa tcagcactcg cgcgcgcctg gcgctgccag aaaaacgaaa
     9301 ttgttctaca ctggcacaaa gccacaggag gaaaacgatg aaggtgaatg atcgggtaac
     9361 agtcaaaacg gatggcggtc cgcgtcgtcc tggcgtggta ctagcagttg aggagtttag
     9421 tgaaggcaca atgtacctgg tttcgctgga agactacccg ctcggcatct ggttctttaa
     9481 tgaagcaggg catcaggacg gtatctttgt ggagaaagca gagtaatctt attcagcctg
     9541 actggtggga aaccaccagt cagaatgtgt tagcgcatgt tgacaaaaat accattagtc
     9601 acattatccg tcagtcggac gacatggtag ataacctgtt tattatgcgt tttgatctta
     9661 cgtttaatat tacctttatg cgatgaaacg gtcttggctt tgatattcat ttggtcagag
     9721 atttgaatgg ttccctgacc tgccatccac attcgcaaca tactcgattc ggttcggctc
     9781 aatgataacg tcggcatatt taaaaaagag gttatcgttg tctctttttt cagaatatcg
     9841 ccaaggatat cgtcgagaga ttccggttta atcgatttag aacttatcaa taaatttttt
     9901 ctgaccaata gatattcatc aaaatgaaca ttggcaattg ccataaaaac gataaataac
     9961 gtattgggat gttgattaat gatgtgcttg atgtgctgac tgttagaagc atcatggatg
    10021 aaacagtcct cattaataaa caccactgaa gggcgctgtg aatcacaagc tatggcaagg
    10081 tcatcaacgg tttcaatgtc gttgatttct ctttttttaa cccctctact caacagatac
    10141 ccggttaaac ctagtcgggt gtaactacat aaatccataa taatcgttga catggcatac
    10201 cctcactcaa tgcgtaacga taattcccct tacctgaata tttcatcatg actaaacgga
    10261 acaacatggg tcacctaatg cgccactctc gcgatttttc aggcggactt actatcccgt
    10321 aaagtgttgt ataatttgcc tggaattgtc ttaaagtaaa tgttgcgata tgtgagtgag
    10381 cttaaaacaa atatttcgcc gcaggagtat cctggaagat gttcgtaggt attatttttc
    10441 ggataatcct taggataaca tgataaacgt tacggaatta tattaatggc aattcactaa
    10501 taatatcagc cagcaaatta aacatctcac tgaataaatg ttcgcaaaaa ggtgcaatta
    10561 acggcattaa tgccgccatt aaagagatac cgacagtcag agttaatgga aatccaataa
    10621 caaaaatgga taattgcggg gccatacgat tcagtaaacc taatgccaga ttcagggtca
    10681 gcagcagagt aatgagcggt aacgccagca tcagcccgtt aaggaaaatc aaactccccg
    10741 ctttggtgag tgccagaaac gcattgctgt tcaacggttc gccaccaatt ggcagggtgt
    10801 gaaaggtatc gaccagcagt gaaatcaacc ataaatgacc gttaaatgtc aggaacagca
    10861 gtaacgccag catatccatg atacgcgcta aaacgggcat attgagatgg ctggccggat
    10921 cgacaaacgt cgcaaatgac agccccattt gcagaccgat aatttcgcca gcggttcgca
    10981 cagcggcaaa ggcaaattgc atggtaaaac caagcgcaat gccgatcagg atctgctgca
    11041 cggccagcca cagagcaaag aacgaaaaaa caggaacatc gttggcaggt aatgatgggg
    11101 caatgacgaa cgtgatcatc attgccagcc ccagttttac ccgtttcggc acgctgcgtt
    11161 cgctcagaat tggtgcggta gaaatgagcg ccagcacgcg cagtaacggc cagaagtaca
    11221 ggcttaacca ggaaagccat tgatcgcttg tcacctgcat cattgtacgg cctacccgat
    11281 gatatacggc aggttagtga acaaggtgcg gacgtaatcc agcaacagat tgagcatcca
    11341 cggtccggca ataataatgg caataaatac ggcgatgatt tttggaataa acgacagcgt
    11401 catttcgttg atctgcgtgg cggcctgcaa aatactgatg ataaggcccg tgaccagcgc
    11461 caccagcaac agcggggcag ccagtgccag cgcgactttc atcgcttcag tccccatcat
    11521 catgaccgat tcaggtgtca ttttgcctct ctagctgtaa aagctctgcg ccagcgaacc
    11581 gaccagcaat tgccagccat ccaccagtac aaacagcatc agtttaaagg gcagagcaat
    11641 ggtggcgggg ggaccatcat catccccaat gccatcaaca cgctggcaat caccaggtcg
    11701 ataatcaaaa aaggaatgaa aatcgtgaag cctatctgaa atgcggtttt caactcgctg
    11761 gtcacgtagg ccgggcgcaa aatgcgcatc ggcacggctt caggtccctg caacgggccg
    11821 gtattcgcta gtctggcaaa caaccctaaa tctgcctcac gggtctgacg cagcataaac
    11881 tcacgtagcg gctgcgcccc tttttccagc gcctcctgca ttgatatttt ctcttcgctg
    11941 aatggctggt acgcatcgac ataaattttg tcgatcaccg gtgacataat aaaaaaggtc
    12001 aaaaatagtg ccagccccag caatacctgg ttaggtggcg cggagggcgt tcccagcgcg
    12061 ttacgcaata aaccaaaaac aatgatgatg cgggtgaaac tggtcatcat cagtaaaatt
    12121 gccggaataa acgtcaacga ggtgatgaac accagcgtct gcaccgggag cgaccagctt
    12181 tgtccaccgc caggcagcgg ctggctggtg atacccggca gttgcgcgaa ggcgaggggc
    12241 gtaaccagcc agagaaggac aggtgcgaca gacaacaaac gacgcatcag gatctcccac
    12301 tacgcttaag caaatttttc atgaccgact gaaaatcggt ctgcggtatc tcttctgttg
    12361 gtgctgaagg gggaagttta tgcagcagat tgatttgccc tgcggtaacg ccgagcacca
    12421 gccgtgcatc ttccacatag accaccacaa cccgttcacg cgcgcccagc gaagcactgg
    12481 cgctaatttt cagaccgtta acgccagtgc gtttcggggc aaatcccaac cgttttacct
    12541 gccaggcagc agcgaggatc agggcaataa tggcgatgag tgcgccgctg acctgcagca
    12601 gtggcgcagc agaaaccggc gtggaagatt gcacagtagc gtggttattc atcactaacg
    12661 gctcaggcga tgcattcgct cagacggagt aatgatatcg gtgatccgca cgccatattt
    12721 atcggcaacg accaccactt cgccctgggc gattaaataa ccgttgatca gaatatccag
    12781 tggttcgccc gccagaccgt ccagcgccac gacggaccct tgcgtcagac gcaacagctc
    12841 tttgatggtc atccgcgtac ggcccagctc gacggtcagc ttgaccggaa tatccattat
    12901 caggtcgata tcctgcaacg ttccgctgac atcaccaccg ccaaattgct ggaacaccgc
    12961 gtcggcagcg cttttgctgc tggttgattt ttgttcgctc aacgcttcag cccacagatc
    13021 gtccattgcg ccgttgttgt catcggccgg attattcatg tcactcattt gggctgttcc
    13081 tcgttcagag aatttaaaat cgggttaatc aaatgttcta tccgtaacgc atactgaccg
    13141 ttgagagtgc cgtactgact ggtcagcacc gggacgccgt caacatgggc gatgatgcga
    13201 tcaggttttt ctatcggcag gacgtcgccg ggtttcagtt ttaaaatctg cgacaggcgt
    13261 agcgagatat cggcaaagtt ggcgaccagc tccagctgtg aatgctgcac ctggcgcacc
    13321 aggttatcgc gccagttctg atcttcatta cgcgagtttt ccagcggcgg gttaaccaac
    13381 aattcccgta gcggctcgat catgctgaat ggcagacaga tattaaattc gccggtcagg
    13441 ttgccaatct ccacatggaa cggcgtgtta accacaatgt cgttcggcga ggtggtgata
    13501 ttggtaaatt tcacctgcat ttccgaacgc acgtactcaa cttccagcgg attaatcgcc
    13561 ttccaggcgt cgctatagcc ttcaagcgcc agctttaaca tgcggttgat gacgcgctgt
    13621 tcggtatggg taaactcgcg accttccact ttggtcggga agcgtccatc gccgccaaac
    13681 aggttatcca cggcgataaa caccagactc ggtgaaaaca ccaccagccc tgtgccgcgc
    13741 agcggtttca gatggataag gttcaggttg gtcggcaccg gcaggttgcg ggcaaattca
    13801 tggtacggct gaatgcggat ggccccgacg gttatatccg ggctacgacg cagcaggttg
    13861 aacagcccca tacgaaaatg gcgggcaaag cgctcattaa tgatttccag cgcctgcaaa
    13921 cgttcgcgca caacccgtcg ttgggtattc ggatcgtacg gacgaatgtc actttcgccg
    13981 ctaacactgg ctgtcggttc gtctttgact tcgctgtcac cattcaacag cgcatcaatt
    14041 tcagcttgag aaagaatact atcgcccatg tcgttatcgc agaataaaag cggtatacag
    14101 cacgtcggtg acatcctgtt tcggttgccc ggcaacaagc ggggtggaaa gcgtggtttt
    14161 aatctcggca atcaggtttt tcttgccttc ttctgtcgcc agtacggcag catcctgacg
    14221 cgaaaacagt aacagcaaac ggctacggac ttccggcaaa tactcactca gccgcgagcg
    14281 ggtagcttca tctttcaggc gcagggttat gccgatataa agcacgcgat ccgcatcgcc
    14341 caaattgacc gtgaaggtat tcagcgcgta gaagaccggg gagggtacga cgcgttgctg
    14401 cgctttgtcg tcagcggcaa cctgatgcga atgccagtag ctgtaacctg cgctggcaca
    14461 ggccgcgagg gtaatgaata ccagaatcgg gatccaaagc gatcgcttgc ttttcttgct
    14521 tatcgcgtaa tcagtcatgt gttgcggtct tcctgtgtcg ctactgctta tcggctaatt
    14581 atcctgcgtt ttgagcgcaa caaagcgggg aaaagacgcg gattacggtg ctacctctga
    14641 cgttaggcga aaatatcaac gccgctgttg cctgttacac gcccttgtaa agagacggga
    14701 accggaagcg tatcgtcgtc ttcccccgcc agaggttcat ggtttactgt gcgttggctt
    14761 tgctgttgtt gggaagcggc ctgctgctga ccactaaagc tttcgccact gatgttgctt
    14821 tgccctaact gaatgccact ttcggccagc tgcgtacgca gtaccggaag cgctgcttcc
    14881 agcgcggcgc gtacatgctg atgcggtgaa accatctgga tttgcgcctg gttatcatcc
    14941 actttgaggg agatttgcac ttcacctaaa tcctgcgggt gcagacgcaa ctctgcactt
    15001 tgttgcccct ggcgggtgaa cagcgaaata tgctggctta atgattgttg ccattcgtga
    15061 gaacccagcg gtgcactcaa aacaggcgcg gcgacggtgg gcagtggctg tgtctggtgt
    15121 ggagtaatta gcgggctggc ggcagcggtc accggtgacg gtgtgctgat gacttccgct
    15181 ttactctggg cttctgctac cagcggtgtt aatggctgag ctggcgtgcc gggggcatca
    15241 tcaggctgtg ctgttgtgag ttgcgcagaa gtcagttttg tgaagagcgt tggtttctct
    15301 gccggtaaca cggttgacgg cacatcagtc actttgggcg tattgtcaaa acccggcaac
    15361 atcgcaaaaa gggcgctcag gcttgcggtg acgtcttcat tcagatcatc cgctttttcg
    15421 tcttttgtcg tattttggtc agccaccgca gccaacgtca tcgtctgagc ggtggttaac
    15481 ggtgttgatg tggattgttc gtcgttgatg acaggcagtg tttcatccac ggggatcagt
    15541 aaatccgctt gttgcgcgtc ggcaagaata tcgctgatca gcggctcgcc ttttgtcgtg
    15601 ggcttatctg ttgccaccag caactggggg gccgctttgt cggtagttgt ctcgcctgct
    15661 aatgcttcgc tcaacaacgc gagaaaatct tgtgcagcat cgctggcttt gccgccaggc
    15721 aatgtggtgg tgtcaacgtc ggcggtaatt aagggcgcta agcgaatcat tcaggtttcc
    15781 tcatggcggc gcgctgggcg aactcatcca tctttttctg atcgaggcgg ttttctgcaa
    15841 gcagtgccgc cgtggatagc cgttcctgca gtgtctgcca ggcctgcaaa cgttgtttct
    15901 tttctcgcca gctgttcagg gcaatgtcaa ctttctgcgt ccactgatta agttgctggc
    15961 gatgctgagt aatggctttt tccagcgtct ggataaactg ctgatagttg atccagcggt
    16021 tgctggtcat cccggcactc atatcgctgt tgaggttatt gcgatattca ttctgataat
    16081 cgatcagcat tttgagctgt tcttccgcct gctgacaccc gcgacgcatt tcacccagca
    16141 ggcgcgcggc atcctctacc tctttttctg ccagatcttt cagggtcgcc agcgcgccat
    16201 gttctgccat ctgccgttat ctcctgggtt atgacactgt cgggaaaata cgctccagcc
    16261 cctggagaga cgcttcccag tccgcgcgtt caaaaatgcc ttgttgcaaa tagccctcca
    16321 gctgcggcca cagggcgatg gctttgtcga gcatcggatc gctgcctttg gcatacgcgc
    16381 cgacgctaac cagatcgcgg ttacgctgaa aactcgacaa cagctgtttg aaggtgcgca
    16441 ctcgcgcgta atgttgctca ctgatcaacg ccgtcattgc gcggctgatc gacgcttcaa
    16501 tatcgatagc cggatagtgc ccggcttccg ccagtcggcg agacagcaca atgtgaccgt
    16561 cgaggattgc ccgcgcagag tcggcaatgg ggtcctgctg gtcatcgcct tcagtgagca
    16621 cggtataaaa cgcggtaatc gatccgccgc cgctaatgcc atttccggca cgctcgacca
    16681 gtgccggtaa tttggcaaac accgacgggg gataaccttt agtggcgggt ggttcgccaa
    16741 tcgccagcgc aatttcacgc tgggccatcg cgtagcgggt gagggagtcc ataatcagca
    16801 acacatgctg accacgatcg cgaaaatctt cggcaatgcg cgtggcatag gcggcaccct
    16861 gcattcgcag gagaggagaa acatccgccg gagcggcaat caccacggag cgtgcacgcc
    16921 cttcggcacc gaggatattc tcaataaaat cttttacttc gcgtccgcgt tcaccaatca
    16981 aacccacgac aatgacatcg gcgcgggtgt aacgtgccat catccccagc agcacacttt
    17041 taccaacgcc ggacccggca aacagcccca tacgctgccc acgcccaacg gtaagcaggg
    17101 cattgattgg gcgcacgccg gtgtccagca catgttcaat cggtgtacgt tgcaacgggt
    17161 taaatggcgg ggtaatcagc gcaccggttt ccgtcgtatc gggggaggcc atcgagcggt
    17221 ttaccgctgc cgtccagaac acgacctaat aacgccggac cgagcggtaa ctgtttgccg
    17281 ctttgcagcc cttctgccga aatgtttttg gcataaacac gcgcgccggg caggacacct
    17341 tcgacttcct ccagcggcat taaaaacagc cgttgaccgt taaagccaac gacttcactt
    17401 tctacttcgt gcgtttcagt gccgttctgg cgctcaatca cacaggttgc gccgagcggc
    17461 aattgtaatc cggtggcttc cagcaccagc ccggtagcgc gggttaatcg cccgtagcga
    17521 cgtaccgcag gcaactgcgc cattttggct tcaaagttat ccagcgtggt tagccagcga
    17581 gtcaggcgcg tggtcattac accactcctg gtgctgccag acggcagagt tcttgccagc
    17641 gagtggcgac actggcgtcg agatcgcctt catcggcgga gactttacag ccgccaggat
    17701 ggagggtggg atcgccccgc aagcgccagc catgcaaact taaggtagcg ccgagcatat
    17761 catccacacg ttgcagatca tccgggtgca cgcgcagctg tggtttaccg ctgaataacg
    17821 gttcttgctg caacaactgt tggatctgtt tgatgagtgc cgagttatcc actgttggcg
    17881 tctgaccgat gacctgacgt gctgcctcca gcgccatctg catcaggcgc gaagc
//
LOCUS       DADMIB010000080        17799 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.080, whole genome shotgun sequence.
ACCESSION   DADMIB010000080 DADMIB010000000
VERSION     DADMIB010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17799
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.080"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..386
                     /locus_tag="JNZ89_002491"
     CDS             <1..386
                     /locus_tag="JNZ89_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936338.1"
                     /translation="LAEVRQHTWSSGTNGVVAATFSLRLKGKPVSFVVPLAFVKNLDK
                     TLTVNTGALLTMSVSANGGMPPYKYAWKKDGQPVDGQTTDTFSKPGAQSADAGKYTCV
                     VTDSAEKAQSVTSVECTVTVSAAAG"
     gene            401..775
                     /locus_tag="JNZ89_002492"
     CDS             401..775
                     /locus_tag="JNZ89_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936339.1"
                     /translation="MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLW
                     QEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGP
                     VHARLLRQALELIADAESARKK"
     gene            871..1080
                     /locus_tag="JNZ89_002493"
     CDS             871..1080
                     /locus_tag="JNZ89_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HAY8936340.1"
                     /translation="MWMEFDRISPLGDERGDIRNAQIVKAVFGAQGMNVALKDVMLCW
                     GEDEDKPEVDPFAALEDALSFAAQS"
     gene            1128..1388
                     /locus_tag="JNZ89_002494"
     CDS             1128..1388
                     /locus_tag="JNZ89_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936341.1"
                     /translation="MATLRELIIKIVSFRGTHIDAFFRRASSAAHTNARGLITVDLFC
                     CTEAIARQVPEAGSEVLSSVIASGREVLTRGLIAGDDVLTRE"
     gene            complement(1523..3124)
                     /locus_tag="JNZ89_002495"
     CDS             complement(1523..3124)
                     /locus_tag="JNZ89_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc49 family transposase"
                     /protein_id="HAY8936342.1"
                     /translation="MNIRIWSGILPCMDISALNTTNDIEKLRAMALAMVQEVMSENAE
                     KERELLEKSRRIQLLEEMLKLVRQQRFGKKCETLAGMQRSLFEEDVDADIAALTAHLD
                     KLLPQSPEEDEKASRSRPIRKPLPVHLPRVEKMIQPDTDHCPECDEPLHYIRDAVSEK
                     LEYIPAHFVVNRYVRPQYSCPCCQKVFSGEMPAHILPKSAVEPSVIAQVIINKYGDHL
                     PLYRQQQVFARSDVGLPVSSMADMVGAAGAALSPLAALLHRELINRPVVHADETTLKI
                     LNTKKGGKSCSGYLWAYVSGERTGPSVVCFDCRTGRSHEYPENWLQGWGGTLVVDGHK
                     AYRTLANKVPEITLAGCWAHARRGFADLYKISKDPRAAIAVKKIAGLYRLEKKISSRP
                     VEKIRQWRQRYARPILEELWSWLEEQEPQCSPGKALHKAIAYALSHRVELSRFLEDGA
                     VPLDNNVCERAIKNVVLGRKSWLFAGSQMAGERAAQIMSLLETAKRNGLEPHAWLTDV
                     LMRLPEWPEERLAELLPLEGFTFSG"
     gene            complement(3131..3523)
                     /gene="tnpB"
                     /locus_tag="JNZ89_002496"
     CDS             complement(3131..3523)
                     /gene="tnpB"
                     /locus_tag="JNZ89_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8936343.1"
                     /translation="MLSPDNVFIAIKPVDMRRGIDSLTQYIQDELRSTWHEGAAFVFV
                     NKVRSRIKVLRWDKHGVWLCTRRLHKGSFRWPRANDAAWHLTPDEFNWLIAGVDWQQV
                     KGHDLTKWVWQNEPELRPENTQNTLLTQ"
     gene            complement(3510..3839)
                     /locus_tag="JNZ89_002497"
     CDS             complement(3510..3839)
                     /locus_tag="JNZ89_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001325657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HAY8936344.1"
                     /translation="MSKPRWTIEQKRQHVAAWRASGLTRQQYCELNDIPFTSLREWPQ
                     DVAKAERRANEPTVLPVHIAPPLHADVPQPVTNEPVTLFLPGGVRMCCQPSQLTDVFR
                     ALKYAQS"
     gene            3884..7144
                     /locus_tag="JNZ89_002498"
     CDS             3884..7144
                     /locus_tag="JNZ89_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_304285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8936345.1"
                     /translation="MTEDPCEDDFPVTTLKISANSQSFQSEIQRASRMGSEYYRTLQN
                     GGRHAAAAAREQRRALAELNSQLTEIRGSAVGMAGAFAGAFATEHLISLADEWGSVNA
                     RLKQASQSSDEFSSSQKVLMDISQRTGTAFSDNAALFARSAASMREYGYSADDVLKVT
                     EAISTGLKLSGAGVAESGSVITQFSQALAQGVLRGEEFNAVNENGDRVIRALAAGMGV
                     ARKDLKAMADDGKLTADKVVPALISQLGILRDEYAAMPETVSGSITKVENAFMAWVGE
                     VNEACGVTKTLSGVLNGVAGQIDNVATAVGALVAVGVARYFGNMASGAMSATAGLVTA
                     ARNEVALAEAQFRGTQIATARARAAVYRAQQAVAAARGTEMQIAAEARLAATQERLNR
                     NIAARSAAQNALNSTTAVGSRLMSGALGLVGGVPGLVMLGAAAWYTLYQNQEQAWESA
                     RQYALTIDEIAHKTPSMSLPEASDNEGRTRAALTEQNRLIDEQASRVKSLQEKIAGYQ
                     YVLANPGWTTGDGFMINHLTSVKTVTEGLAQATEQLAVEQSRLALMQEKAQSIQDVLA
                     GLEDRRVALIRQQAAEQNKVYQSMLVMNGQHTEFNRLLGLGNELLQQRQGLVNVPLRL
                     PQATLDDKQQSALTKTERELALSRLKGEEKERVRLGYAADDLGFVGDLYQEARQRYIS
                     NALEAWRNNEANKPKSRGGKSETEKAEDSFSRLLKQQKEQLALAGQNTELAKLKYQTA
                     QGELKTLTEMQKQELLRNAALIDQQKIREQLRSREETLKNDNVAARASNEAELLGYGQ
                     GERLRERMRELQQIRDSFRQKDADLQSQYQTGDISEDFYRQALAQNAQYLSERLKEQE
                     AFYAESDVQRADWQKGLQEGFSNWVDNASDYASQAAQLATEGISGMVNNITEMLNGNK
                     VEWRSWASSVLQEISKVLMNAAIVNGIKTAANSMSGAGGFIGSIGSWLGGAVANAKGG
                     VYTSANLSAYSNSIVDTPTYFAFAKGAGLMGEAGPEAIMPLTRAADGSLGVRAVGSMN
                     GSAGLVYSPVYHIAIQNDGTNGQIGPEAAGSLVQLIDQRVQAVMLSMRRDGGMLSG"
     gene            7137..7478
                     /locus_tag="JNZ89_002499"
     CDS             7137..7478
                     /locus_tag="JNZ89_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936346.1"
                     /translation="MAEIKTLHLVPREGMQVSEKPSVARVRFGDGYEQRRPTGLNARL
                     KTFQAVFRVTDEATRRWLEEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYS
                     DFSCTIEQVVN"
     gene            7478..8176
                     /locus_tag="JNZ89_002500"
     CDS             7478..8176
                     /locus_tag="JNZ89_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HAY8936347.1"
                     /translation="MQDIHEESLSESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNE
                     KGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGAT
                     VVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDG
                     ALFPGRIMLANTCMWTYRSDECGYTGGAVADEFDKPTTDIRKDRCSKCMRGCELRRNV
                     GNFGGFLSINKLSQ"
     gene            8187..8930
                     /locus_tag="JNZ89_002501"
     CDS             8187..8930
                     /locus_tag="JNZ89_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936348.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVT
                     GFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRR
                     THSVWRHRHWHASAFTGICNDLAAASACM"
     gene            8828..9508
                     /locus_tag="JNZ89_002502"
     CDS             8828..9508
                     /locus_tag="JNZ89_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000246273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY8936349.1"
                     /translation="MATTNAFCLASPPLARICLHGDLQRFGRRLSLYVNTAAEAIRAL
                     SMQMPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGL
                     QIVLGAAAIVGSFFTAGASMALWGSALAAGSFSATTMLFSLGASMILGGVAQMLAPKA
                     KTPDYRATDNGRQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGK
                     VVVIGRQG"
     gene            9749..13222
                     /locus_tag="JNZ89_002503"
     CDS             9749..13222
                     /locus_tag="JNZ89_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY8936350.1"
                     /translation="MGKGGGRAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQS
                     ILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPESFESSGSETVLGVEVTRAKPVTR
                     TITSANIDRLRVTFGVQSLVETTSKGDRNPSSVRLLIQLQRNGNWVTEKDVTINGKTT
                     SQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNRTLWSSYTEIIDVKQCYPNTAIV
                     GMQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCL
                     WDMLTHPRYGMGKCLGAADVDKWALYAIGQYCDQTVPDGFGGTEPRMTFNAYLAQQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSAL
                     KDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTCRGQAHRAGLW
                     VIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRVLSIDAATRTLTLD
                     REVTLPETGTSAVNLINGSGKPVSVDITAHPAPDRIQVSTLPDGVETYGVWGLSLPSL
                     RRRLFRCVSVRENTDGTFAITAVQHVPEKEAIVDNGARFEPQSGSLNSVIPPAVQHLT
                     VEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGEDSRLVTTAITADTEHRFSGLP
                     LGEYTLTVRAINSYGQQGEPATTTFRINAPAKPATIELTLGYFQITAVPRLAVYDPTV
                     QFEFWFSEAKIADTSQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAF
                     VEASGRASNDAEGYLGLFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEI
                     TQTVSKTLEDQSATIQQIQRVQKDTNDDLAALYMLKVQKTKNGIPYVAGIGAGIEDTD
                     GQPLSNILLLADRIAMINPEDGNTTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPT
                     FSLTPEGRLTARNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKA
                     FPRDSRAPERWPSGTVTVRIYDDQPFDRQIVIPAVAFSGAKHEREHTDIYSSCRLIVR
                     KNGAEIYNRTALDNTLIYSCVIDMPAGHGHMTLEFSVSAWLVNNWYPTASISDLLVVV
                     MKKATAGISIS"
     gene            13290..13889
                     /locus_tag="JNZ89_002504"
     CDS             13290..13889
                     /locus_tag="JNZ89_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HAY8936351.1"
                     /translation="MRKVCAAILSAAICLSVSGAPAWASEHQSTLSAGYLHARTNAPG
                     SDNLNGINVKYRYEFTDALGLITSFSYANAEDEKKTHYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF"
     gene            13954..14950
                     /locus_tag="JNZ89_002505"
                     /pseudo
     CDS             13954..14950
                     /locus_tag="JNZ89_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216474.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S74"
     gene            14963..15361
                     /locus_tag="JNZ89_002506"
     CDS             14963..15361
                     /locus_tag="JNZ89_002506"
                     /inference="COORDINATES: protein motif:HMM:NF025253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HAY8936352.1"
                     /translation="MLTTANTWTQAQTFNGGINGNLTVTGNGSFNDIQIRSDKRNKRN
                     LVKLDNALDRLEALTGYLYEIQYSADGWQTSVGLIAQDAQKALPELVTEDADVISGEK
                     RLRLNYNGIIALLVEGFKTLRHEIKELREK"
     gene            15447..15959
                     /locus_tag="JNZ89_002507"
     CDS             15447..15959
                     /locus_tag="JNZ89_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936353.1"
                     /translation="MGVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTM
                     GCKIATEYYKWKSSDKVDNWGAVGADWPLEEKSKGTITNAASCGSGRLVGAVVTLSHF
                     LTNSTPTAAVYLAGGKAGNITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKK
                     TGVPQDLKIS"
     gene            16035..16247
                     /locus_tag="JNZ89_002508"
     CDS             16035..16247
                     /locus_tag="JNZ89_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001114260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HAY8936354.1"
                     /translation="MPEKFFRTDADNNDVPMTAASWMALSEATEQAMFAKGVEINTRQ
                     LQMKAEVEALTDLKAIRSYVVGWPAG"
     gene            complement(16389..16714)
                     /locus_tag="JNZ89_002509"
                     /pseudo
     CDS             complement(16389..16714)
                     /locus_tag="JNZ89_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414822.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            complement(16850..17098)
                     /locus_tag="JNZ89_002510"
     CDS             complement(16850..17098)
                     /locus_tag="JNZ89_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY8936355.1"
                     /translation="MRIEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(17453..>17799)
                     /locus_tag="JNZ89_002511"
     CDS             complement(17453..>17799)
                     /locus_tag="JNZ89_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY8936356.1"
                     /translation="PAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRR
                     RGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIA
                     RVRSVEEILHAL"
BASE COUNT         4198 a         4290 c         5437 g         3874 t
ORIGIN      
        1 tcctggcgga agtgcgtcag cacacctggt catccggtac caacggtgtg gtggctgcaa
       61 cgttctcact gcgtctgaaa ggcaaaccgg tgtcctttgt ggtaccgctg gcgtttgtga
      121 aaaatctgga taagacactt accgtgaata ccggtgcgct gctgacaatg tcagtcagtg
      181 ccaacggggg aatgccgccg tataaatacg cctggaagaa ggatggtcag ccggttgacg
      241 ggcagacgac agacaccttc agtaagccag gtgcgcagtc cgctgatgcg gggaaatata
      301 cctgcgtggt gaccgattcg gcagagaaag cacagagtgt gacgtctgtt gaatgcaccg
      361 tgacagtgag cgcagctgcc ggataagggg atgggtcatc atgaaaaagg atctgaaaac
      421 gctggcgctg gccagactgt cagggtttcg tcataaaacg gtgaaggtgc cggaatgggg
      481 gaatgtcagc gtggtgctgc gggagccttc ggcagaggcc tggtatctgt ggcaggaagt
      541 gctcaatggt gatggagagg atgacgatac cctgtcggtg gtggcgaaaa cccgccgtaa
      601 cttggaagcg gatgtgacgc tgttctgcga tgtcctgtgt gatacggacc tgcagcgggt
      661 gttcactccg gacgaccgtg agcaggtgct ggccgtctat ggtccggtac atgcccggtt
      721 gctgcgtcag gcactggaac tgatcgctga tgcagagtcg gccagaaaaa agtagcccgc
      781 ccggaaattc gctttctgat gcgacttgcg ctccgtctgg ggcgcacctt atccgaactg
      841 cgccacagcc tgagtgcgag cgaggcgatg atgtggatgg agttcgacag gatatccccg
      901 ctgggtgatg agcgcgggga tatccgtaat gcacagatcg tgaaagcggt tttcggggca
      961 caggggatga atgttgcact gaaggacgtc atgctctgct ggggcgagga tgaggataag
     1021 ccggaggtgg atccgtttgc ggcgctggaa gacgcgctga gctttgcagc acagtcatga
     1081 atgatgagaa ccgctgaggc ggttttttta cgcccggaga aaggtgaatg gcgacgttac
     1141 gtgaactgat tatcaaaatt gtaagcttcc ggggaactca tattgacgcg tttttcaggc
     1201 gcgcgtcatc ggcggcgcat acgaacgctc gtggtttgat aacggttgat ttattttgtt
     1261 gcacagaggc gatcgccagg caggtaccgg aggcgggctc tgaagtactg agtagcgtga
     1321 tcgcgtcagg ccgcgaagta ctgactcggg gattaattgc aggtgatgat gtactgaccc
     1381 gggaatgact ccgggctgat tcaggttctt attcgctgtc agcccgcgtg gttgctggtc
     1441 tggctcattt cctgcagtca ggagttcaac tcccgactgc aggttatggc ccggtgcacg
     1501 aacacctgac ggcaggtatc actcacccgg agaaggtaaa tccctcaaga ggcagcaact
     1561 ctgccagtcg ctcctccggc cactccggca gacgcatcag gacgtctgtc aaccaggcat
     1621 gcggctccag accgttgcgt ttcgcggttt ccagcaagct cattatttgc gcggcgcgtt
     1681 ctcccgccat ctgcgaaccg gcgaacagcc acgattttct gcccagaacc acgtttttga
     1741 tggcccgttc acacacatta ttatccagcg gcaccgcacc atcttccagg aagcggctca
     1801 gttccacgcg atgagacagc gcataggcaa tagctttgtg taatgccttt cccggagaac
     1861 attgcggttc ctgctcttca agccatgacc acagttcttc cagtatcgga cgggcataac
     1921 gctgtcgcca ctggcggatt ttttccacgg ggcggctact gatcttcttc tcaagacggt
     1981 acaaccccgc gattttcttc acggctatgg cagcccgtgg atctttactg attttataca
     2041 ggtcggcgaa gcccctgcgg gcatgggccc agcatccggc cagcgtgatc tccggcactt
     2101 tgtttgccag agtccggtaa gctttatgtc cgtcgacaac cagcgtcccg ccccagccct
     2161 gaagccagtt ttcaggatac tcatggctac gtccggtccg gcagtcgaag cacacaactg
     2221 acggtcccgt cctttctcca ctgacgtatg cccacagata accggagcag gatttaccgc
     2281 ctttcttcgt gttcaggatc ttcagggtag tctcatctgc atgcaccacc ggacggttta
     2341 tcaactcgcg atggagtaac gccgccaggg gagataatgc ggcacccgcc gcgccaacca
     2401 tgtcagccat cgaactgacg ggcagcccga catctgaacg ggcaaagacc tgttgctggc
     2461 gatacagagg caggtggtca ccgtatttat tgatgatcac ctgtgcgatg actgatggct
     2521 caacggcact tttcgggagg atatgtgccg gcatttcacc gctgaacacc ttctggcaac
     2581 agggacaact gtattgcgga cggacataac ggttcaccac aaagtgagcg ggaatatact
     2641 ccagcttttc actcaccgca tcgcggatat agtgcagcgg ctcgtcacat tcagggcaat
     2701 ggtcagtgtc cggctggatc attttttcca cccgtggaag atgaaccggt aagggtttgc
     2761 gtatcgggcg tgaacgggac gctttttcat cttcttcagg ggattgcggg agcagtttat
     2821 ccagatgtgc ggtaagcgcg gcgatatcgg catcaacatc ctcttcgaat agggagcgtt
     2881 gcataccagc cagcgtttca catttttttc cgaagcgctg ttgacgaacc agtttcagca
     2941 tttcttccag aagctggatg cgccggcttt tctccagtaa ttcccgctct ttttcggcat
     3001 tctccgacat gacttcttgt accatggcaa gtgccatagc acgcagtttt tcgatgtcat
     3061 tcgtggtgtt gagagcggag atatccatac aggggagtat accactccag atacggatat
     3121 tcattatttt tcactgagtt agcagtgtat tttgcgtgtt ttcagggcgc agttcaggtt
     3181 cattctgcca gacccatttc gtcaggtcat gtcccttaac ctgctgccag tcaacaccgg
     3241 caatcagcca gttaaactcg tcgggagtga ggtgccaggc agcgtcattt gcacgtggcc
     3301 agcggaagct gcctttgtgc agacggcggg tacacaacca caccccgtgt ttatcccacc
     3361 ggagaacttt gatacgcgaa cggactttgt taacaaagac gaaggcggct ccctcatgcc
     3421 atgtcgaccg gagttcatcc tgtatatact gcgtcagtga gtcgatgccc cggcgcatgt
     3481 caacaggttt aattgcgatg aagacattat caggactgag catatttgag tgccctgaag
     3541 acatcggtaa gttgtgacgg ctgacagcac atccgtactc caccgggaag gaagagcgtg
     3601 actggctcat tcgtgacggg ctgtggtaca tcagcatgca gtggtggcgc aatatgaacg
     3661 ggaagaacgg tcggttcatt tgcccggcgt tcagcttttg cgacatcctg cggccattcg
     3721 cgaagtgatg tgaagggaat atcgttgagt tcacagtatt gctgacgtgt aagaccactg
     3781 gcgcgccagg cagcaacgtg ctgccttttc tgttcaatgg tccatcgggg ttttgacatc
     3841 gattatctcc ggtaagttgg tgaatggatg tcggtaatac taactgaccg aagatccctg
     3901 tgaagatgac ttccccgtaa cgacactcaa aatttcggca aattcacagt cattccagtc
     3961 ggagatccag cgggcgtccc gtatgggcag tgaatattac cggaccctgc agaatggcgg
     4021 acgtcatgcc gctgctgccg cacgggaaca gcgccgcgcc cttgcagaac tgaacagtca
     4081 gttgacggaa attcgcggtt ctgctgtcgg aatggctggc gcatttgccg gtgcctttgc
     4141 caccgaacac ctgatttcgc tggccgatga gtggggttcc gtgaatgccc gtctgaaaca
     4201 ggcatctcag tcatcggatg aattctcgtc atcacagaaa gtgctgatgg atatcagtca
     4261 gcgaacaggt accgcgtttt cggataatgc ggccctgttt gcccgttcgg ctgcctcgat
     4321 gcgtgaatat ggttacagtg ctgatgatgt gctgaaggtg acggaggcca tttcgacagg
     4381 actgaaactg tcaggggctg gagttgcgga atccggttcg gtgatcaccc agttcagcca
     4441 ggcactggca cagggtgtac tgcgtggcga agaatttaat gctgttaacg aaaatggcga
     4501 ccgggtgatc cgcgcgcttg ctgcggggat gggtgtggcc cgtaaagatc tgaaggcaat
     4561 ggcggatgac ggaaaactga cagcggataa agtggtccct gcgttaatca gccagctggg
     4621 gatattacgt gatgaatatg cggccatgcc ggaaacggtt tccggtagta tcacgaaggt
     4681 ggaaaacgcc tttatggcct gggtgggcga agtgaatgag gcctgcgggg tgacaaaaac
     4741 gctctccggc gtgctgaacg gtgttgccgg acagattgat aatgtggcaa cagctgtggg
     4801 ggcgctggtt gccgtcgggg ttgcccggta ctttggcaat atggcctccg gagcgatgtc
     4861 tgccacggca ggacttgtga cggctgcacg taatgaagtt gcactggcgg aagcacagtt
     4921 caggggaacg cagattgcca cggcgcgggc aagggcagcc gtgtaccgtg ctcagcaggc
     4981 cgtggcggca gcccgcggga cggagatgca gattgctgca gaggcccgtc tggcggccac
     5041 acaggaacgc ctgaacagaa atattgctgc cagaagcgcc gcccagaatg cgctgaacag
     5101 tacaacggcg gtgggctcac gtctgatgag cggtgcgctg gggctggttg gtggcgtacc
     5161 cggactggtg atgctggggg ctgcagcatg gtacacgctg taccagaatc aggagcaggc
     5221 ctgggagtct gcgcgccagt atgcactgac gatagatgaa atcgcgcata aaacgccgtc
     5281 aatgtctttg cctgaagcct cagataatga aggacgaaca cgggcggcgc tgacagagca
     5341 gaaccggctg attgatgaac aggctagtcg ggtgaaatcc ctgcaggaaa aaatcgcagg
     5401 atatcagtat gttctggcga acccgggctg gacgaccggt gacggattca tgataaacca
     5461 tctgacctcg gtgaagaccg taacggaagg gcttgctcag gcaacagagc agcttgccgt
     5521 tgagcagtcc cgtctggcac tgatgcagga aaaagcgcag tccattcagg atgtgcttgc
     5581 cgggctggaa gaccgtcgtg tggcgttaat tcgtcagcag gcggcagagc agaataaggt
     5641 gtaccagtcc atgctggtta tgaacggtca gcatacggaa ttcaaccgtc tgctggggct
     5701 gggtaatgaa ctgcttcagc agcggcaggg actggtgaat gtgccgttac ggctgccaca
     5761 ggccactctg gatgataaac agcagagtgc cctgacaaaa acagagcgtg agctggccct
     5821 gtccagactg aaaggggaag aaaaagagcg tgtccgactg gggtatgcgg cggatgacct
     5881 cggttttgtg ggtgatctgt atcaggaggc gagacaacgt tatatcagta atgccctgga
     5941 agcctggcgc aataacgagg cgaataaacc caaatcccgg ggtggaaaat cagagacgga
     6001 aaaagcggaa gacagttttt cccggctgct gaagcagcag aaagagcaac tggcactggc
     6061 ggggcagaat acagagctgg cgaagctgaa ataccagact gcgcagggcg aactgaaaac
     6121 cctgacggag atgcagaagc aggaactgct gcgcaatgcg gccctgattg accagcaaaa
     6181 aatccgggag cagttgcggt cccgggaaga gaccctgaag aatgataatg tggctgctcg
     6241 tgcatcaaat gaagcggaac tgctggggta cgggcaggga gagcggctcc gtgaacgcat
     6301 gcgggagttg cagcagatcc gcgacagttt ccgccagaag gatgcggacc ttcagtctca
     6361 gtatcagacc ggggatatca gtgaggattt ttacagacag gctctggcac agaacgcgca
     6421 gtatctgagt gaacgtctga aagagcagga agccttttat gccgaatcgg atgtgcagcg
     6481 tgcggactgg cagaaagggc tgcaggaggg attcagtaac tgggtggata atgcgtccga
     6541 ttacgcctca caggcagcac agcttgcgac ggagggtatc tcagggatgg tgaataacat
     6601 cacggagatg ctgaacggaa ataaagtgga atggcgcagc tgggcctcat cagtgctgca
     6661 ggaaatatca aaagttctta tgaatgccgc gattgtcaac gggatcaaga cggcggcaaa
     6721 cagtatgtcc ggagcgggag gatttatcgg cagtattggt agctggctgg gcggtgcggt
     6781 ggccaatgca aaaggcggtg tgtatacctc ggcaaacctg agtgcgtaca gcaacagtat
     6841 tgtggatacg cccacgtact ttgcctttgc aaaaggggcg ggactgatgg gggaggccgg
     6901 tcctgaagcc attatgcccc tgacccgggc ggcggatggc tcgctgggtg tgcgagcggt
     6961 gggcagtatg aacggcagtg caggtctggt gtattccccg gtctaccata tcgccattca
     7021 gaatgacggg actaatggcc agatagggcc ggaagctgcg ggcagccttg tgcaactgat
     7081 tgaccagcgg gtgcaggcgg tgatgctgtc catgcgacgt gacggaggaa tgctgagtgg
     7141 ctgagataaa aacgctgcat ctggtcccgc gtgaagggat gcaggtgagt gagaaaccgt
     7201 cggtggcgag ggtacggttt ggtgacggtt atgaacagcg ccgcccgacg ggacttaatg
     7261 cccgactgaa gacgtttcag gcggtgttcc gggtgacgga tgaggcgacc cggcgatggc
     7321 tggaagagtt tttatcgtgg catggtggtt accgtgcctt tttgtggcga ccgccgaaac
     7381 ataaccggac ggtgagggtg gtatgccggg agtggagcgt cacagataac gccaggtaca
     7441 gtgatttcag ttgtacgatt gagcaggtgg tgaactgatg caggatattc acgaagaaag
     7501 tctgagcgag tcggttaaat cagagcagtc accgcgggtg gtactctggg aaattgacct
     7561 gacggtgcag ggtggtgagc ggtatttttt ctgtaatgag ctgaatgaaa aaggggagcc
     7621 ggtcacctgg caggggcgta agtatgaggc atacccgatt gacggcagcg gctttgagat
     7681 gaacggccgg ggcagcagtg ccagaccgtc gctgacggtg tccaatctgt tcggtctggt
     7741 caccgggatg gcggaagacc tgcagagtct ggtgggggcc acggtggtcc gccgccgggt
     7801 gtatgcccgt tttctggatg cggtgaattt cgttgcgggc aatccggagg cggacccgga
     7861 gcaggagctg agtgaccgct gggtggtgga gcagatgtcg cagctgacag ccatgacggc
     7921 ctcgtttgtg ctggctacac cgaccgagac ggacggggcg ctgtttcccg gtcgtatcat
     7981 gctggcgaac acctgtatgt ggacctaccg ctctgatgag tgtggttaca cgggcggggc
     8041 tgtggcggat gagttcgata aacccaccac ggatatccgt aaggacagat gcagcaagtg
     8101 catgcgcggg tgtgaactgc gcaggaatgt cggcaatttt ggcggtttcc tttccattaa
     8161 taaactttcg cagtaaatcc cgatttatga cacagactga atcagcgatt ctggcgcatg
     8221 cccggcggtg tgcgcctgcg gagtcgtgcg gcttcgtgat aagcacgccg gagggggagc
     8281 ggtatatccc ttgtgtgaat atttctgcag agccggaggc gtattttcgt atcgcaccgg
     8341 aagactggct gcgggcagag atgcaggggg agattgtggc actggtccac agtcatcccg
     8401 gtgagctgcc ctggctgagc gaggctgacc ggcggctgca gataaaaagc gcactgccct
     8461 ggtggctggt ctgccggggg gaaattcata aattccgctg tgtgccacat ctgacaggac
     8521 ggcgctttga gcacggggtg acggactgtt acacgctgtt ccgggatgca taccatctgg
     8581 cgggaattga tatgccggat tttcatcgcg aggatgactg gtggcgcaac ggccagaacc
     8641 tgtacctgga caatatggcg gtcaccggct tttaccgggt gcccctgtcc tctgcaccgc
     8701 cgggcgatat tctgctgtgc tgctttggtg cttcggtacc gaaccatgcc accatttact
     8761 gcggcaacgg tgagctgctt caccatctgc ctgaacaact gagtaaacgg gagaggtatt
     8821 ccgaaaaatg gcaacgacga acgcattctg tctggcgtca ccgccactgg cacgcatctg
     8881 ccttcacggg gatttgcaac gatttggccg ccgcctcagc ctgtatgtga acacggcagc
     8941 ggaagccatt cgcgccctgt cgatgcagat gccgggcttt cgccgtcaga tgaacgaagg
     9001 ctggtaccag atacgtattg ccggtgatga cacggcaccg gaggcggtgt atgcccgtct
     9061 tcacgaacag ctgggtgagg gaacggtcat ccacattgtg ccgcgactgg ccggggccgg
     9121 aaagggtgga ctgcagattg tgttgggggc ggcagccatc gtgggctctt tcttcactgc
     9181 cggggcatca atggcgttat ggggttcagc cctggcagcc ggtagttttt ctgccaccac
     9241 gatgctgttt tcacttggag ccagcatgat tctgggcggt gtggcccaga tgctggcccc
     9301 gaaggcaaaa acaccggatt accgcgcaac ggataacggc agacagaaca cgtacttttc
     9361 ctcgctggat aacatgattg cccaggggaa cccgatgccg gtgccttacg gggaaatgct
     9421 ggttggctcc cgccgtatat cccaggacat cagcacccgt gatgaaggcg ggggcggaaa
     9481 ggtcgtggtt atcgggcgac agggataaaa cataaaaaaa tcccgcagtg atcgcggagc
     9541 tgcggggaca gacaaatgaa gatcaatgtg aaggagttgt ttttgttact cgggcaaaaa
     9601 aacactaacg cagcgaaatt ataagcgcca cagtcagtgt gtgaaaatgt gaagatattc
     9661 agaaatttta ttccgtcatg acgcaggcac ccggtgaggt gcctgttgtt tttgtgagtg
     9721 aacaattatc acggtaagag gtgatgtaat gggcaaaggt ggcggcaggg cgcacacacc
     9781 gcgtgaggcg aaagacaatc tcaaatccac gcagatgatg agcgtgattg atgcgattgg
     9841 tgagggaccg atagaaggcc cggtgaaagg cctgcagagt attctggtga acaaaacccc
     9901 gctgacggac acggacggta atcccgtgat acacggtgtg accgcggtct ggcgtgccgg
     9961 ggagcaggag cagacaccac cggaaagctt tgagtcctcc ggctctgaaa ctgtactggg
    10021 tgtcgaagtg accagggcaa aaccggtaac acgcaccatt acgtcagcga acattgaccg
    10081 cctgcgggtg accttcgggg tgcagtcact ggtggagacc acgtcaaagg gtgaccgtaa
    10141 tccgtcctct gtccgtctgc tgattcagtt acagcgtaac ggtaactggg tgacagaaaa
    10201 ggatgtcacc attaacggca agaccacctc acagttcctt gcgtcggtga ttctggataa
    10261 tctgcctccc cgccccttta acatccggat ggtcagggag acggcggaca gcaccacgga
    10321 ccagctgcag aacagaacgc tgtggtcgtc atacaccgaa atcatcgatg tgaaacagtg
    10381 ctacccgaac acggccattg tggggatgca ggtggatgcg gagcagtttg gtggtcagca
    10441 gatgacggtg aactaccata tccgcggtcg catcatccag gtgccgtcaa actatgaccc
    10501 ggaaaaacgc acgtacagtg gtatctggga cggcagtctg aaaccggcat acagcaacaa
    10561 cccggcctgg tgcctgtggg acatgctgac tcacccgcgc tacggcatgg gaaaatgtct
    10621 gggggcggcg gatgtggaca agtgggcgct gtatgccatc gggcagtact gcgaccagac
    10681 ggtcccggat ggtttcgggg ggaccgagcc gcggatgacc tttaatgcgt acctggcaca
    10741 acagcgtaag gcgtgggacg ttctcagtga tttctgctct gcgatgcgct gtatgccggt
    10801 atggaacggt cagacgctga cgttcgttca ggaccgcccg tcggatgtgg tgtggccgta
    10861 caccaacagc gatgtggtgg tggatgataa cggcgtggga ttccgctaca gcttcagtgc
    10921 cctgaaggac cggcacacgg cggtggaggt gaattacacc gacccgcaga acggctggca
    10981 gacctccacg gaactggtgg aagacccgga agccatactg cgctacggac gcaacctgct
    11041 gaagatggat gcgtttggct gtacctgccg cggtcaggct caccgtgcag gtctgtgggt
    11101 gataaagacc ggactgctgg aaacgcagac ggtggacttc acgctcgggt cacaggggct
    11161 gcgtcacaca ccgggtgaca ttattgaaat ctgtgataac gactatgctg ggactatgac
    11221 cggcggacgt gtcctgtcca ttgatgctgc cacccgcacc ctgacgctgg accgtgaggt
    11281 taccctgccg gagacaggta catcggcggt gaacctgatt aacggcagtg gtaagccggt
    11341 gagtgtggac atcaccgcac accccgcgcc ggaccggata caggtcagta ccctgcctga
    11401 tggtgtggag acatacgggg tgtggggact ctccctgccg tcactgcgcc gtcgcctgtt
    11461 ccgctgtgtc tccgtccggg aaaacacgga tggcaccttt gccatcacgg cggtgcagca
    11521 cgtaccggaa aaagaagcca tcgtggataa cggtgcccgc tttgagccgc agtcaggctc
    11581 cctgaacagc gtcatcccac cggcagtgca gcacctgacg gtggaggtga gcgcagctga
    11641 cggccagtat ctggcacagg cgaaatggga cacgccgcgg gtggtgaagg gggtgcgctt
    11701 cagtctgcga ctgaccagcg gaagcggaga agacagccgt ctggtgacca ccgctatcac
    11761 tgcggataca gagcatcgtt tcagtggtct gccgctcggg gaatacaccc tgacagtcag
    11821 ggcaattaac agttatggcc agcagggcga accggccacc accaccttcc ggattaacgc
    11881 gccagcaaaa cccgccacca ttgaactgac gctggggtat tttcagataa cagcggtacc
    11941 gcgtcttgcg gtgtatgacc cgacggtaca gtttgagttc tggttttcgg aggcaaaaat
    12001 cgcagacaca tctcaggtgg aaacctctgc ccgttatctg gggaccggca gtcagtggag
    12061 tgtatccggc ccgcacatta agcccgggaa ggatttctgg ttttacgtgc gcagcgtcaa
    12121 cctggtgggg aaatctgctt ttgtggaggc cagtggacgg gccagcaatg atgcagaagg
    12181 gtatctgggg ctgtttcggg aaaaaatagg aaaactgcat ctggctcagg ggctgtggga
    12241 gctgatagac aacagccagc ttgcggatga gatggcggag atgaagacca ccatcaccga
    12301 aacccgcaat gaaatcacac agacggtcag taaaacgctg gaggaccaga gcgccaccat
    12361 acagcagata cagcgcgtgc agaaggacac aaatgatgac cttgctgcac tttacatgct
    12421 gaaggtacag aaaacaaaaa atggcatacc ctatgttgcc ggtattggag cggggattga
    12481 ggatactgat ggccagcccc tgagcaacat actgctgctg gctgaccgta ttgcgatgat
    12541 taacccggag gacggcaaca ccacgccgtt atttgtggcg caggggaatc agttgttcat
    12601 gaacgatgtg ttcctgaagc ggctgtttgc ggtgagtatc acctcgtccg gcaatccccc
    12661 gacgttttcc ctgacgccgg agggcaggct gaccgcaaga aatgctgata tcagcggtaa
    12721 cgtgaatgcg aactccggga cgctcaacaa cgtcacgatt aacgagaact gccgggttct
    12781 gggaaaactg tccgcgaacc agattgaagg cgatctcgtt aaaacagtgg gtaaggcttt
    12841 tccgcgggac tcccgggcac cggagcggtg gccatcaggg accgttaccg tcaggattta
    12901 tgacgatcag ccttttgacc ggcaaattgt tattccggcg gtggcattca gcggcgctaa
    12961 gcatgagaga gagcatactg atatttactc ctcatgccgt ctgatagtgc ggaaaaacgg
    13021 tgctgaaatt tataaccgta ccgcgctgga taatacgctg atttacagtt gcgttattga
    13081 tatgcctgcc ggtcacggtc acatgacgct ggagttttcg gtatcagcat ggctggtgaa
    13141 taactggtat cccacagcaa gtatcagcga tttgctggtt gtggtgatga agaaagccac
    13201 cgcaggcatc agtatcagct gaattttata acccatatac gggcgccaga aatggcgcct
    13261 tttttattgc agaaaagcga gaggtaatta tgcgtaaagt ttgtgcagcc attttgtccg
    13321 cagccatctg cctgtccgta tccggtgcgc ctgcatgggc gtctgaacat cagtccacac
    13381 tgagcgcggg gtatcttcat gcccgtacga acgctcccgg cagcgataat ctgaacggga
    13441 ttaacgtgaa ataccgttat gagtttacgg acgcgctggg gctgattacg tccttcagtt
    13501 atgccaatgc tgaagatgag aaaaaaacgc actacagcga tacccgctgg catgaggatt
    13561 ccgttcgtaa ccgctggttc agcgtaatgg cggggccgtc tgtgcgcgtg aatgaatggt
    13621 tcagcgcgta tgcgatggcg ggtgtggctt acagccgtgt gtcgactttc tccggggatt
    13681 atctccgcgt aactgacaac aaggggaaaa cgcacgacgt gctgaccgga agtgatgacg
    13741 gtcgccacag caacacgtct ctggcgtggg gggctggcgt gcagtttaac ccgaccgaat
    13801 ccgtggccat tgatattgct tatgaaggtt ccggcagtgg cgactggcgc actgacggtt
    13861 tcatcgtggg tgtcggctat aaattctgat tagccaggta acacagtgtc atgacagccc
    13921 gccggttcag gcgggctttt ttgtggggtg aatatgacag taaagatttc tggtgtactg
    13981 aaagacggca caggaaaacc ggtacagaac tgcacaatcc agctgaaagc aaaacgtaac
    14041 agtaccacgg tggtggtgaa cacgctggcc tcagaaaatc cggatgaagc cgggcgttac
    14101 agtatggacg ttgagtatgg tcagtacagc gttattctgt tggtggaggg attcccgccg
    14161 tcacatgccg ggactatcac cgtgtatgaa gattctcaac ccggtacgct gaatgatttt
    14221 ctcggtgcca tgactgagga tgatgcccgt ccggaggcac tgcgtcgctt tgaactgatg
    14281 gtggaagagg tggtgcgtaa cgcagaggag gcgaagaaga atgccggaga ggcggagacg
    14341 tcagcgagga atgccggcat atcagccagt caggcagaag agagcgctgc aaatgctgac
    14401 acttcagcag gggatgcatc ggagtcagcc cggcaggcgg cagaaagtgc agcctcagca
    14461 aagcagtcag aggaggcgtc ctcgtcctcg gcctctgcgg ccgctcaaaa agccagtgag
    14521 tcattacaaa gtgcaacaga tgctgagttg tcaaaaaaga cggcagaaag tgcagccggt
    14581 aatgcagtca gggatgcaac gaccgcaaca gaaaaagccc gggagtcagc agaaagcgca
    14641 cagtcagcgg aacaaagcag gatagcggcg gaagaggccg taaaccgaat ccccaccgtg
    14701 gtgggacctc ccgggccaaa gggggaaccg gggcccgcgg gtcctcaggg gccgaaggga
    14761 gataaaggag agcgtggcga caccggcccg gcaggggcca aaaggtgaca aaggcgatcc
    14821 gggagtggct ggaccagcag gtccggcagg tgcgccgggg ccgaaaggcg ataaaggtga
    14881 tccgggagta gcaggtccag caggtccggc ggggccacag ggaccgaagg gagacacagg
    14941 agcccccggg caaggaacag aactgcttac tactgccaat acatggactc aggcacaaac
    15001 ttttaatggt ggtattaatg gcaatttgac ggtgaccgga aacggctcat ttaacgatat
    15061 tcagatccgt tcggataaac gtaacaagcg aaatctggta aaactggata atgcgttaga
    15121 tcgtctggag gcacttactg gttatcttta cgagatacag tactctgccg acggttggca
    15181 aacgtcggtt ggtttaattg ctcaggatgc acaaaaagca ttgcctgaac tggtaactga
    15241 agacgcagac gttatatctg gtgaaaaacg tctgcgtctt aactacaacg gcataattgc
    15301 attgttagtc gagggcttta aaacacttcg tcatgagatt aaagaactcc gggagaagta
    15361 aacgacagct gttgtagttt ctggtttcta ctgaatttaa attgtggggt gacactcacc
    15421 ccacgcattc agaaggggga gatgagatgg gggtaacatc gggatgggta ggctcttcgg
    15481 ctaagagcga aacaggtgag cagtggatgg gagccgccgg aaccaaactg ggactgagta
    15541 aaccttttat gatgagccaa atggttgggc gaactatggg ctgtaaaatt gcaactgagt
    15601 actataaatg gaaatcctct gacaaggttg ataactgggg cgcagttggc gctgactggc
    15661 ctttagaaga aaaaagtaaa ggtacaatta caaacgccgc aagctgcgga tcagggaggc
    15721 tggtaggggc tgtcgttaca ctttctcact ttttgacgaa ctctacaccg acagctgctg
    15781 tttatttagc cggtggtaaa gcaggtaaca tcaccgtaaa cgtaggtggt gctacacaaa
    15841 ccatgattta tcagggcgtt gttagtgggt tccagtatta ctggtcaggt tctgttagtt
    15901 ccgctttcgt ggaggcaatg aaaaagacgg gagtacccca ggatctaaaa attagttaaa
    15961 tggtaaataa ataattttaa aaacttcacg ttctacatac cggagacgcc ggatatatag
    16021 gatattgttt taagttgcca gagaaatttt tccggacgga tgctgataat aatgatgtgc
    16081 caatgacggc agcatcatgg atggcactga gtgaagcgac agagcaggcg atgtttgcga
    16141 agggagtgga gattaataca cggcagttgc agatgaaagc cgaggttgag gcgctgacag
    16201 acctgaaggc gatccgcagt tatgttgtcg gatggcctgc tggctgaata aaaaaacggg
    16261 accacgacca gtcccggaac catgagtttt agggtattag tttgttatca tagttagcgt
    16321 gctaagtatg ccatgtcagg ttgattagtg aagtgatgtt gttcgcattt ttgcacggcg
    16381 gagaatattc agatttttgg aaatccatat ttttcccgtg cgcgattaca tgcttcattt
    16441 acgatgctat tttcgccgga cattgcgaat tccctgcatg tggacggttt ttgtaaacag
    16501 agcaatatgc gttttctccg gggggggccg gcaagagcgc cacatcgggg atttttctga
    16561 ttggtgccgc gcatacagcg atgaaaagga gatatttgct cagtgagact gaccgaaacc
    16621 tttccgccag catcgtcagc ttctgcccag taaaaagaga cgcggaaaat gcacaacagg
    16681 caccacacgt catgcatgga ttcagattgc tcataattca ccagtacagc tataaatcgt
    16741 aaagagaaca gcggtacatc gtatgtaaga acgtaccgcg gctggctggt gaacttccga
    16801 tagtgcgagt attgaatgat ttccagccgt taccgatttt acgtgctaat tagtgaacaa
    16861 accactcgtc agcagactcc caggtatctt tcagagtttc ctgaacaaaa gttttagctg
    16921 aatctttatc ggcggtgcgc gtaacagaaa ggccatcgtt gctggtagct tttacgatca
    16981 cctctacatc gtcataacgt ttactgatgc gtcgggttaa ttcttccttt aacgcatcca
    17041 cagcaccggt tggcatttta gtcatttttt ctttggctat gcagatttca atacgcataa
    17101 aagtccctct acactgtgtt tgtatacagt atcattttta actgtatgga taaacagtat
    17161 taagggtgaa ggaaagtgat tttttggggc atgcatgggg caaaaatatt tgttgtgggg
    17221 cattttgggg catgattggg acactttgtt acatatgaac tttgccgatt tttatatgac
    17281 atggaaatac aacgctttga ttcttctaaa taaaaaacat gctcttgggc gttctttagt
    17341 gatttttaaa aattccgtat cacgcagtta aagtggcggg catactcttc aaggctggtg
    17401 atccccaacc gcacccattt aggatgcgac cattgcggta gaccgatgta aatcataacg
    17461 cgtgaaggat ctcttccacg ctacgcacac gggcgatgcg cgggtagata tgattaatgc
    17521 tgttattgtg ttgctcggcg ctggcggcac tacaggcgtc ttcggcaatc accagattaa
    17581 agccaagttc ccaggcattg cgggcggtgg attcaacacc gatattggtc gagatcccac
    17641 ataacactat tgtatcgata cctcggcggc gcagttgcaa ctccagatcc gtaccgtaaa
    17701 acgcacccca ctgacgtttg atgatttcga tatcactgtc agttgcacct aatgcagctg
    17761 gatgttgcca ccagttttcg ggcaacactt tagcggggg
//
LOCUS       DADMIB010000081        17786 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.081, whole genome shotgun sequence.
ACCESSION   DADMIB010000081 DADMIB010000000
VERSION     DADMIB010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17786)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17786)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17786
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.081"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..224)
                     /locus_tag="JNZ89_002512"
     CDS             complement(<1..224)
                     /locus_tag="JNZ89_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HAY8936357.1"
                     /translation="MTWNLLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINIL
                     FTSRQMIIETFICPVSSISNPDEFNTFLLR"
     gene            complement(351..1082)
                     /gene="rlmB"
                     /locus_tag="JNZ89_002513"
     CDS             complement(351..1082)
                     /gene="rlmB"
                     /locus_tag="JNZ89_002513"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HAY8936358.1"
                     /translation="MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALE
                     AQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG
                     VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLVRT
                     MRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM
                     AGSVSSLNVSVATGICLFEAVRQRS"
     gene            complement(1263..3704)
                     /gene="rnr"
                     /locus_tag="JNZ89_002514"
     CDS             complement(1263..3704)
                     /gene="rnr"
                     /locus_tag="JNZ89_002514"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HAY8936359.1"
                     /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVEL
                     HIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVE
                     GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEA
                     GVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
                     GTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDA
                     RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLP
                     EVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQG
                     DQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAECRIERIEQT
                     QRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLEL
                     PGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
                     TSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
                     EATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYY
                     RFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
                     KAKKGDAGKKGGKRRLVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIA
                     AATKAKRAAKKKVAE"
     gene            complement(3743..4168)
                     /gene="nsrR"
                     /locus_tag="JNZ89_002515"
     CDS             complement(3743..4168)
                     /gene="nsrR"
                     /locus_tag="JNZ89_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide-sensing transcriptional repressor
                     NsrR"
                     /protein_id="HAY8936360.1"
                     /translation="MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVK
                     IINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPAC
                     RLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE"
     gene            complement(4373..5671)
                     /gene="purA"
                     /locus_tag="JNZ89_002516"
     CDS             complement(4373..5671)
                     /gene="purA"
                     /locus_tag="JNZ89_002516"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HAY8936361.1"
                     /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
                     VINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSE
                     ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAE
                     KLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDF
                     VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGA
                     GPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLD
                     VLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGL
                     PQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
     gene            complement(5775..5972)
                     /locus_tag="JNZ89_002517"
     CDS             complement(5775..5972)
                     /locus_tag="JNZ89_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HAY8936362.1"
                     /translation="MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRR
                     FGGGLVVAGVVVYYMLRKTIG"
     gene            complement(6054..7058)
                     /gene="hflC"
                     /locus_tag="JNZ89_002518"
     CDS             complement(6054..7058)
                     /gene="hflC"
                     /locus_tag="JNZ89_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HAY8936363.1"
                     /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNK
                     PLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
                     YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
                     GTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTE
                     VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGD
                     AEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
                     "
     gene            complement(7061..8320)
                     /gene="hflK"
                     /locus_tag="JNZ89_002519"
     CDS             complement(7061..8320)
                     /gene="hflK"
                     /locus_tag="JNZ89_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HAY8936364.1"
                     /translation="MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDI
                     FRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKE
                     AERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE
                     MNVQYRVTYPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
                     ELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ
                     PRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIETMEKV
                     LGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASN
                     TSSTSQGDIMDQRRANAQRNDYQRQGE"
     gene            complement(8406..9686)
                     /gene="hflX"
                     /locus_tag="JNZ89_002520"
     CDS             complement(8406..9686)
                     /gene="hflX"
                     /locus_tag="JNZ89_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HAY8936365.1"
                     /translation="MFDRYDAGEQAVLVHIYFTKDKDMEDLQEFESLVSSAGVEALQV
                     ITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVID
                     RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRIT
                     EARVYAADQLFATLDPTLRSIDVADVGETILADTVGFIRHLPHDLVAAFKATLQETRQ
                     ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEE
                     NKPIRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE
                     WMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI"
     gene            complement(9763..10071)
                     /gene="hfq"
                     /locus_tag="JNZ89_002521"
     CDS             complement(9763..10071)
                     /gene="hfq"
                     /locus_tag="JNZ89_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HAY8936366.1"
                     /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE
                     "
     gene            complement(10157..11107)
                     /gene="miaA"
                     /locus_tag="JNZ89_002522"
     CDS             complement(10157..11107)
                     /gene="miaA"
                     /locus_tag="JNZ89_002522"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HAY8936367.1"
                     /translation="MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSA
                     LIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIP
                     LLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARI
                     HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRF
                     HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATR
                     QLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAITG"
     gene            complement(11100..12947)
                     /gene="mutL"
                     /locus_tag="JNZ89_002523"
     CDS             complement(11100..12947)
                     /gene="mutL"
                     /locus_tag="JNZ89_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HAY8936368.1"
                     /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDI
                     DIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASI
                     SSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKF
                     LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT
                     AFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQAC
                     EDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL
                     ETPLPLDDEPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPN
                     AQPGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRVLTIVHSDCALLE
                     RDGNISLLALPVAERWLRQVQLTPGEAPVCAQPLLIPLRLKVSGEEKSALEKAQSALA
                     ELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLM
                     SEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE"
     gene            complement(12957..14294)
                     /gene="amiB"
                     /locus_tag="JNZ89_002524"
     CDS             complement(12957..14294)
                     /gene="amiB"
                     /locus_tag="JNZ89_002524"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HAY8936369.1"
                     /translation="MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFI
                     GDPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDL
                     TENGKTEAVKRQNGSNYTVVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNP
                     FKTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNV
                     TIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNR
                     SATGASVWVLSNRRANSEMASWLEQHEKHSELLGGAGDVLANSQSDPYLSQAVLDLQF
                     GHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEE
                     RLLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN"
     gene            complement(14313..14774)
                     /gene="tsaE"
                     /locus_tag="JNZ89_002525"
     CDS             complement(14313..14774)
                     /gene="tsaE"
                     /locus_tag="JNZ89_002525"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HAY8936370.1"
                     /translation="MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTF
                     SRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFAND
                     AICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG"
     gene            complement(14746..16293)
                     /gene="nnr"
                     /locus_tag="JNZ89_002526"
     CDS             complement(14746..16293)
                     /gene="nnr"
                     /locus_tag="JNZ89_002526"
                     /EC_number="4.2.1.136"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HAY8936371.1"
                     /translation="MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLR
                     AGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLFAQESDKPLP
                     EEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSH
                     PAPIVAVDIPSGLLAETGATPGAVINADHSITFIALKPGLLTGKARDVTGQLHFDSLG
                     LDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEA
                     ALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQE
                     WGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIES
                     DRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGA
                     LLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHD
                     ESSNSAP"
     gene            16292..17431
                     /gene="queG"
                     /locus_tag="JNZ89_002527"
     CDS             16292..17431
                     /gene="queG"
                     /locus_tag="JNZ89_002527"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HAY8936372.1"
                     /translation="MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWL
                     DKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVS
                     RYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKH
                     SLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARR
                     CISYLTIELEGAIPEELRPLMGNRIYGCDDCQPICPWNRYSQLTTEEDFSPRKPLHAP
                     ELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGGH
                     PLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA"
     gene            complement(17414..17467)
                     /locus_tag="JNZ89_002528"
     CDS             complement(17414..17467)
                     /locus_tag="JNZ89_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936373.1"
                     /translation="MRFYFYSQAVDESGVTR"
     gene            complement(17696..17771)
                     /locus_tag="JNZ89_002529"
     tRNA            complement(17696..17771)
                     /locus_tag="JNZ89_002529"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17736..17738),aa:Gly,seq:gcc)
BASE COUNT         4086 a         5038 c         4421 g         4241 t
ORIGIN      
        1 tttcttaata agaaggtatt aaattcatct ggattgctga tactacttac cggacaaata
       61 aaggtttcga taatcatttg gcgggaagta aaaagaatat tgatttgcaa atcgccataa
      121 tcattcattt taataattaa tgcgttctcg ctatttgtta catcaatatt ttgttcaggt
      181 acagtttgca gcgccgtcgc cagcgccaac agattccatg tcatatatta ttccatatag
      241 atttagttta aatattaata aaatgaatat ttgcagtacg taattatctt accagctata
      301 gacaaaaaaa aaccatccaa atctggatgg cttttcataa ttcagaggaa ctagctgcgc
      361 tgacgcaccg cttcaaataa gcaaattccg gttgcaaccg aaacgttcag agaagaaaca
      421 cttcctgcca ttgggatgct gatcaactca tcgcaatgtt cacgggtcag gcgacgcata
      481 ccttcacctt ccgcgcccat caccagcgcc aggcgtccgg tcattttgct ctgatagagt
      541 gtatgatccg cctcacctgc cgtaccgacg atccagatat tctcttcctg caacatacgc
      601 atggtacgca ccaggttagt cacccgaatc agcggaacgc tttctgccgc gccacaggcc
      661 acttttttcg ccgtggcgtt gagctgggcg gagcgatctt tcggcacaat caccgcatga
      721 acaccagcgg catctgcgct acgcaggcac gcgccgaggt tatgcggatc ggttacaccg
      781 tcaaggatca gcaggaacgg ctgatcgagc gaagcgatca gatccggcaa atcattttcc
      841 tggtactgac gtcctggctt cacgcgggcg ataatgccct gatgcacggc accgtcgctt
      901 ttctcgtcga gatattggcg gtttgccagc tggataacca cgccctgggc ttcgagggcg
      961 tgaatcagcg gtaacagacg tttatcttca cggcctttta aaataaagac ttcctgaaaa
     1021 cgttcagggg cgcgctccag cagggcctgc actgcgtgga tgccgtaaat catttcgctc
     1081 attaatgtac tcgttgttta cgttttgcct gatgcactac gtttatccgg cctacatgat
     1141 ctctgcaata tattgaattt gcgtgattat gtaggccgga taaggcgttc acgccgcatc
     1201 cggcatgaac aaagcgcatt ttgtcagcaa tctaaccctc ttctgtttga agagggtaat
     1261 gatcactctg ccactttttt cttcgccgca cgcttcgctt tggtcgctgc agctattttc
     1321 tgcgttttcg ccgatggctt tttcgctttt ctcgcgtctt tcttcgctgc tttcggcttc
     1381 gtttttttct caccgcggaa ggcgctgtct ggctcaaagt ttaccttttt accgaccaga
     1441 cgacgcttgc cgcctttttt acctgcatcg ccttttttcg ctttctcgcg cgccgtttta
     1501 ccgacgttgc gcggtgcgcg ttcgctggag atcaggctaa agtcgatttt gcgctcgtcc
     1561 atattaaccg cttcgacgcg aacttccacg cgatcgccca gacgataagt ctggccgctg
     1621 gattcaccca tcagccgttg ccctacctgg tcaaagcgat agtagtcatt gtccagcgaa
     1681 gagacatgga ccagaccatc aatgaataag tcgtccagac ggacaaagaa tccaaagcca
     1741 gtgacgctgg aaattacgcc tttaaagacg ttacctacct ggtcgagcat gaagtcacac
     1801 ttcagccagt cagccacatc gcgcgttgct tcgtcggcac gacgttccgc catcgaacag
     1861 tgctgaccca gttgcagcat ttcttccatc gaataatggt agccgccggt ttcagtggtg
     1921 ttgccctgat gcccctgctc tttcgccagc agatatttaa tggcgcggtg cagcgtcagg
     1981 tctggataac gacgaatcgg cgaagtaaag tgcgcatagg actgcaatgc caggccaaag
     2041 tgaccacggt tttctggatc gtaaatcgcc tgtttcatcg agcgcagcag catggtttgc
     2101 agcatttctg catcaggacg atcggcaacc gactccagca gctccgcgta gtcacgcggt
     2161 tccggcttgt taccgcccgg cagttccagc cccagctccg ccagtactga acggaaagag
     2221 gtaatcgctt cggtgctcgg cttgtcgtga atacggaaca atgctggttc tttggctttc
     2281 tcaacgaaac gcgccgccga gatattcgcc agaatcatgc actcttcaat taacttgtgt
     2341 gcgtcgttac gctgagtctg ttcgatacgc tcaatacggc attcagcgtt gaaaataaac
     2401 ttcgcttctt cgctctcaaa tgagatcccg ccacgttctt cacgggcttt atccagcact
     2461 ttatagaggt tatgcaactc ttcgagatgc ttaaccagcg gagcgtactg ctcgcgcaga
     2521 tcctgatcgc cctgcagaat atgccagact ttggtgtagg tcagacgcgc gtgagagctc
     2581 atcaccgctt cgtagaattt gtagcccgtc aggcggcctt tcgacgaaac cgtcatctcg
     2641 cacaccatac acaggcggtc tacctgcgga ttgagcgagc acagaccgtt agagagcact
     2701 tccggcagca tagggataac ctgcgaaggg aagtacaccg acgtaccacg attacgcgct
     2761 tctctatcca gcggcgttgg cggacgcaca tagtagctga cgtcggcaat cgcgacccat
     2821 aaacgccagc cgccgccgcg ttttttctcg cagtaaaccg catcgtcaaa gtcacgggcg
     2881 tcttcgccat caatggtgac cagcggtaaa tcgcgcaaat cgacacggcc cgcttttgct
     2941 tcttccggca cttcttcttt cagcccggca acctgttgct caacagcctg cggccagatg
     3001 tacggaattt catgggtacg caaagcgata tcaaccgcca tgccggtgcc catattgtcg
     3061 cccagcactt cgacgatttt acccaccgct ttggtacggc gagtcgggcg ttgggtcagt
     3121 tcaacaacca ccacaaagcc catccgcgcg cccatgatct gatcgggcgg gattaagata
     3181 tcgaagctca gacggctatc gtcaggaacc acaaagccga cgcccgcttc ggtaaagtag
     3241 cgaccaacaa tctggctggt ttttggcacc agtacgcgga caatacgcgc ttcacgacga
     3301 cctttacggt cagcacccag cggctgagcc agcacctgat cgccatgaat gcaggttttc
     3361 atctgctcgc tggagagata caaatcatct ttacgccctt caacccgcag aaagccgtag
     3421 ccatcacggt ggccaataac ggtacctttc accaggtcga ggcgttccgg cagcgcatag
     3481 cactgacgac gagtgaagac cagttgacca tcgcgctcca tcgcgcgcag gcggcgacgc
     3541 aggccttcaa gctgctcttc gccttcaatg tgcagttcta ccgccagctc atcacggctg
     3601 gccggttttt cacgtttggt taaatgttcg aggataaatt cccgactagg gatgggattc
     3661 gcgtattttt cagcttcgcg ttcctggaaa ggatcttgtg acatctcggt tcctccgttg
     3721 tcatctctga tgaagatttt cgtcactcca ccagcaataa tttataaagc ggttgattct
     3781 cttcaaccaa atcggcaagc gtgtagttat ccagttccgt aagaaaactt tgcacggcct
     3841 tagaaagcgc ctgtttcaac cgacaggcag gtgtaatgtg gcaaaactca ctgctgcaat
     3901 tcaccagcga taagggctcc agctcgcgca ccacatcacc aatacgtatc gcactcgccg
     3961 gtttacccag gcgaatgccg ccattttttc cacgaacagc agtcacgtag ccggcacgac
     4021 taagttgatt gattattttg accatatgat tacgggagac gccgtagacg tcagtcactt
     4081 cagaaatact ggtcatccgc ccttctggca atgacgccat gtagatcagc gcacgtaatc
     4141 cgtaatcagt gaaactcgtt aactgcacat caacctcaaa agggaaatcg ggaaaaaata
     4201 catttatatt gatgataaac cagccacaag ctgtgtcgct aatttatttc agttcgggga
     4261 aggaaaaaag cgaggattta acactgtgtc ggatagcgta atggcttaac cgacacagca
     4321 atgtatcaca ctgttagccc ggcaggcaaa atatctgcca ggcgtaccag aattacgcgt
     4381 cgaacgggtc gcgcagaatc atagtttcag tacgatccgg accggtagag atgatatcga
     4441 tcggcacacc ggtcagctct tcaatacgct tgatgtagtt cagcgccgcc tgcggcagcc
     4501 cgctacgatc tttcacgccg aaagtggatt cagaccagcc cggcatggtt tcgtaaatcg
     4561 gctctacacc tttccagtcg tcagctgcca gcggagtggt agtcacttcg cgaccatccg
     4621 gcatacggta agccacgcag agtttaacct ctttcaggcc atccagaacg tccagtttag
     4681 tcaggcagaa gccagacagg gagttcagct gtaccgcacg acgaacggca acggtgtcca
     4741 gccagccggt acgacgacga cgacccgtcg ttgcgccgaa ttcgttaccc tgcttgcaga
     4801 ggaactcgcc agtttcatca aacagttcgg tcgggaaagg acctgcaccc acacgagtgg
     4861 agtaagcttt gaggataccc agaacgtaat caacataacg cgggcccagg ccggaaccgg
     4921 tcgccacgcc accagcagtg gtgttggaag aagttacgta cggataagta ccgtggtcga
     4981 tatccagcag cgtaccctgc gcaccttcaa acatgacgaa atcgccacgc tgacgcgcct
     5041 ggtcgagcag gtcagaaacg tcaaccacca tagaagtcag gatgtcggca acagccatcg
     5101 tatcatccag aactttctgg taatcaaccg cttcagcttt gtagtagtta accaactgga
     5161 agttgtgata ttccatcact tctttcagtt tttcagcgaa ggtttctttg tcgaaaaggt
     5221 cgccaacacg cagaccgcga cgtgccactt tatcttcata agcaggcccg ataccacgac
     5281 cggtggtgcc gatcgctttc gcgccacgcg ctttctcacg cgcgttatcc agcgcaacgt
     5341 gataatcaag gatcagcgga catgcttcag acagcagcag acgctcacga acggggatgc
     5401 cacggtcttc cagttctttc atctctttca tcagcgcggc cggagacagc acaacaccgt
     5461 taccgatgat gctggttaca ttctcgcgga gaatacctga tggaataaga tggagaacgg
     5521 ttttttcacc gttgattacg agagtatggc ctgcgttgtg accgccctgg tagcgtacaa
     5581 catatttagc ccgttcagtc agaagatcga cgatcttacc tttaccttcg tcaccccatt
     5641 gggtgcccag tacgacgacg ttgttaccca tttttcaaaa tcaccgtttg cttaaaaatg
     5701 gattctacca tcgctttttc agagttacag cactttttgc actcaaaaat gacctcgatc
     5761 agtctgtttt ttgttcagcc aatcgttttc ctcaacatgt agtagaccac aacgcccgca
     5821 accacaagtc caccgccaaa acgacgtaaa atattatcgg gcaaattggt catcgcagag
     5881 atcatcttct tccatgcctt cgggtaaagc atcggcccta aaccttccag taccaaaacc
     5941 agggcaagcg ccagccagat tgtcgaattc attcattatc cttatagaaa aagaaaacca
     6001 ccgacatccc tgaggatgcg gtggctttat tgacctgtac cgcagtcgtt atattaacgc
     6061 gttgcggaag tcggcgtctt catgtagcgg aagaaatcgc tatccgggct catgaccatc
     6121 acgtcctgat tgccagagaa gctgttctca taagcacgca ggctacggat gaatgcgtag
     6181 aagtccggat ctttactgaa tgcatcagca aacagtttgg ctgcttcggc atcgccttca
     6241 ccacgcatga tgcggccctg acgctcagct tctgccagcg ttctggtcac ttcatagtcg
     6301 gcagtcgcgc gcagtttttc cgcttcttcc tgaccttgtg aacggtgacg acgcgctacc
     6361 gcttcacgct cggcgcgcat acggttgtag atcgcttcag acacttcggt cggcaggttg
     6421 atctgcttga tacgcacatc gacaacttca atacccagcg ccgccatact gttcgggttg
     6481 atgaccggaa ctttgccctt cgtctcagcc gttacgcgct ctgccgcttc ggcaatggcg
     6541 ttatctgctg ccggggtagt aacttcatct tctgtacccg cagaaccgga gttcagcgcg
     6601 tcacgtactt cgagggtcag acgaccacgg gaatcagtga cgatatcttt cacgtccagg
     6661 cgaccaattt cagaacgcag acggtcagag aacttacgtt tcaacagcac ttccgcttgc
     6721 gaaatgtcgc caccacccgt tgccaggtag taacggctga aatcgctgat gcgccatttg
     6781 atgtaagagt cgacgatcag gtctttcttc tctttggtca caaagcggtc ggcctggttg
     6841 tccatggtct gaatacgtgc gtcgagcatt ttcaccgttt caatgaacgg tatcttgaaa
     6901 tgcagacccg gctcataaac cagaggtttg ttgtcatcgt cacgcagtac cttaccaaaa
     6961 cgcagcgtaa taccgcgctc accttctttg acgacaaaga cagacatgta aagcactacc
     7021 agcacgatga tgataatcgc gataactgac ttacgcatcg ttattccccc tgacgctggt
     7081 agtcgttacg ctgcgcgttg gcgcggcgtt ggtccataat atcgccctga ctggtggacg
     7141 acgtgttgct tgctccactg gttgtggagg aagaggctgg cggcaaacgc agcagattgc
     7201 tggcaccgtt atcgctcttc gccgcagggg cgttaccacc tttcagcatc tggtctaacg
     7261 gcagaaccat caggttgcca cctttatcgt taaccagcac tttgcgggtg ttacccaaca
     7321 ctttttccat cgtctcgata tacagacgct cgcgagtaat ttccggcgcg gctttatatt
     7381 ccggcagaag tttagcaaag cgcgccactt caccctgagc ttccaggatg gtctgggcct
     7441 tgtacgcacg cgcctcttcg aggatacgtt gcgcctgacc gttcgcacgc ggctgaactt
     7501 cgttggtata cgcttctgct tcacgaatgt attgctgttc gttttcacgc gcggcaatcg
     7561 catcgtcaaa cgccgctttt acttcttccg gcggacgagc agcctggaag ttgacgtcca
     7621 gcagagtgat gcccatgtca tacggacgaa tcgtctcttc cagttcgcgc tgggtatcgc
     7681 tacgaatcac ggtacgacct tccgtcagaa tgcggtccat ggtgtattta ccgataaccc
     7741 cgcgcagggc gctgtcggta gcctgacgca ggctgtcatc cgggctggtc acgctataca
     7801 gatatttttc cggataggta acgcggtact gcacgttcat ctcaacgcgc actacgttct
     7861 cgtccgacgt cagcatcaca ccggaagcgg ccagttcacg cacggcttcc acgtttaccg
     7921 gtttgacttc gtcgataaac gtcggtttcc agttcagacc cggctcaacc agatggctga
     7981 atttaccaaa gcgtgttacc acgccgcgtt cggcttcttt aatggtatag aaaccactgg
     8041 ccgcccagat aatgacaatc gctgccgctg cgatggtaac gacacgaccg ccaagctgcg
     8101 ggcgcgggcc ttgcgatgaa ctgccaccgc cagatccggt gcctttaccg ccgcccagac
     8161 caccgagctt tttgctcagt ttgcggaaga tatcatctaa atcaggtggc ccttgatcgc
     8221 gaccgccttt gtttccattt ccctcagagt tgccgccagg tttgctgctt ccccacgggt
     8281 cgcggtcttg tccgttatta ccgggctgat tccacgccat gtttgtgctc catatttgtt
     8341 atgcggtgat ccctgttgtc tttcgacgcc agaggatatg actccacgct tcagacgcta
     8401 cgccgttaga tcaggtaatc gatcaacgcc ggttcttgtt tacagaggcg acgccagtca
     8461 acgatcggca tacgaacttg cagacttacg ctgccgtcct cctccatcca ctctttttct
     8521 attgcctgaa gctgataaaa acgacttctc agacgccctt cctgcggtgg cagacgcaat
     8581 gtatgctgcg ccacctcgcc ggaaagccgc tccgtcaaag cctgaaaaag ctgtggtatc
     8641 cccgctccgg tctgtgcgga aagccagaca cggatcggtt tgttctcttc gtcccgatca
     8701 atacgcggtt cgaaatcttc cagcatatcg atcttgttca tcaccagcag ggttgggatc
     8761 tcgtgagcgt cgatctcttc aagaaccgta ttcaccgctt cgatgttttc ttgtacacgc
     8821 acatccgccg catcaatgac gtgcagcagt aatgtggctt gccgcgtctc ttgtaacgtg
     8881 gctttaaatg ccgccaccag atcgtgcggc agatggcgaa taaaccctac ggtatctgca
     8941 agtatggttt caccgacatc cgcgacgtca atactccgca acgtcgggtc gagggtggca
     9001 aacaactggt ctgccgcgta gacccgcgct tcggtgatgc gattgaaaag ggtagattta
     9061 ccggcgttgg tatatcccac cagcgaaaca gtaggaacgt cggctttgat acgcgattgc
     9121 cgcccctgct cacgctgctt ttcaactctt tccaggcgcg actgtatctg cacgatgcga
     9181 ttacgcaaca aacgacggtc ggtttcgagc tgggtttcac ccggaccacg caaacctatc
     9241 ccgcctttct gtctttcaag gtgggtccag ccacgcacca ggcgcgtagc cagatggcgc
     9301 agctgcgcca gctcaacctg caacttaccc tcatgggtac gcgcacgttg ggcgaaaata
     9361 tctaaaataa ggccggtgcg gtcgatgaca cgacactcgc acaaacgctc caggttacgc
     9421 tcttgcgccg ggctcagggc atggtcaaaa agaacgaccg aagcacccgt cgctttgaca
     9481 gcttccgcaa tttcaactgc tttaccttca cctacaaaat actttgggtg cggcgcttta
     9541 cggctaccgg taatcacctg caatgcttcg acaccggcgg aagaaaccag agattcaaac
     9601 tcctggaggt cttccatatc tttgtctttc gtaaaataga tgtgtaccag taccgcctgc
     9661 tcaccagcat cataacggtc aaacaagcgt ataaccctct aaatagatca gcggggaacg
     9721 caggatcgct ggctccccgt gtaaaaaaaa cagcccgaaa ccttattcgg tttcttcgct
     9781 gtcctgttgc gcggaagtat tctgcgcgct gctaccatga tggtagttac tgctggtacc
     9841 gccaccggcg ttgttactgt gatgagaaac cggacgagac gggacaacag tagaaatcgc
     9901 gtgcttgtaa accatctggc tgaccgtgtt tttcaacagg atcacgaact gatcaaaaga
     9961 ctcgatttgc ccttgcagct taataccatt caccaaataa atagaaactg gaacacgttc
    10021 ccgacgcagt gcgttcagga acggatcttg taaagattgc cccttagcca ttctctcttt
    10081 tccttatatg cttatttgta ctttgaacct ttcgattctg aaaaaattgc gcacgatacg
    10141 tctcaattgt acacattcag cctgtgatag caccaacaac ctgtaatact tcgtcacgcg
    10201 cctgttctgg tttttcactg tcaagccagt gaaccccttc ccaaccacgc agccaggtta
    10261 tctgccgctt cgccaactgt ctcgtggcgc aaacacctcg ataaaccatt tcatcgtatg
    10321 agatttcgcc ttcaaggtaa gaccacatct ggcgataacc cacgcaacga atggaaggca
    10381 agtccgtatg caaatctcct cgggcaaaaa gcgcccggac ttctgcttca aaacctgaag
    10441 ccaacatctg atgaaaacgc tgctcaatgc gttgatggag cagttcacgg ctcgccgggg
    10501 cgatggcgaa ctgatgcacc tgatacggta gagcgtctcc tgacgtttgc gtcagttccg
    10561 ttaaagtttt acccgaaatg aaaaaaactt ccagtgcccg ggaaagcctt tgtggatcat
    10621 ttggatgaat ccttgctgcc gcaaccggat ctacctcctg aagttgacga tgcaatgact
    10681 cccaaccttg ctctgccgcc tgttgctcaa ttctggcccg cacttccggg tctgccgacg
    10741 gtagcggcga caacccttcc agcaatgcct tgaaatacaa catcgtaccg cccactaaca
    10801 gtgggatccg ccccgccgcg gtgatatcgg ccatttccgc cagcgcatcg cggcgaaaat
    10861 cagcagccga gtaagcctgc gacggatcgc gaatatccag caatcggtgc ggcgcggcga
    10921 gtaactcttc agcgttcggc ttcgccgtcc cgatatccat ccctttgtaa ataagggcag
    10981 aatcaacgct tatcaactct actggtaaaa ttttacgcag ctcaatggct aacgccgttt
    11041 taccggaggc cgtcggcccc atcaaaaaaa tcgccttagg caggctcgcc ttactgatat
    11101 cactcatctt tcagggcttt tatcgccgga tgtaaatcaa cagattgtaa cagaccaccc
    11161 ggcggcgttt tcacaagttg cggacataac cgttccacgt ccgccagcag ggttatggcc
    11221 tgtgccattg accactgcgc atgttcgctc atcagatttc gtgcaatcca ctgcgcaata
    11281 ttgccaggtt cgaatacgga ctgcttcgcc aggtagccta tcagttcagg aatcaagatt
    11341 tgtaaatttt gttggcgtaa gggtaaaggc acggccctga tggtcacatg ctgtgcatct
    11401 gactggaaat caatacccaa ttccgccagg gcagactgcg ctttttctaa tgccgatttt
    11461 tcttcgccag aaacttttag ccgcaacgga ataagcagcg gctgagcgca aactggcgct
    11521 tcacccgggg tcagttgtac ctgacgcagc caacgttctg ccactggcaa ggctaaaagt
    11581 gaaatgttgc cgtcgcgctc cagcaacgca cagtcggaat ggacgatagt cagtacccga
    11641 ccaaaactct gactgttcgc cgcaagtgca ggttcctgcg gttccggcgc ttttaatttt
    11701 tgcatcggcg cgggcgtttg caaaagctgg cgatacactt caccttgctg tttctggtag
    11761 cctggctgcg cattcggcca aggggcagcc ggacgactgc ctgatgctgg cgcaggagtg
    11821 tagcgcggag ctaccggctc acgagctgcc ggttctgcaa agtgattgcg ccccgccgcc
    11881 acgcggtttt ccggaatgga acgcggtgca ggttggggtt catcgtccag cggtagcggc
    11941 gtttccagtt gctgttgtag cacgctcagc acgccctgat agataaaatc atgcaccaga
    12001 cgcgactgat ggaaacgcac ttcgtgtttg gcggggtgca cgttgacgtc cacctgatgc
    12061 ggatcgatct ccagatacag cacaaatgcc ggttgctgat cggcccccag tttgtcttcg
    12121 caggcctggc ggatcgcgtg attgatcagg cgatcgcgca tcatgcgacc gttcacgtag
    12181 caatactgaa tttctgccag tgcgggcgtg gtgtgatttg gatcggccac ccagccgcgt
    12241 agcgtgagat cgccgtgttg ccattcaatc gccagcgctt gttcaagaaa agcggtgccg
    12301 caaatcgcgc ctaagcgccg ttctttttgc ccgccttccg gcactgcgcg gtactgacgc
    12361 acaattttac cgttatgcga caggttgatc gtgacgtcga aacgcgccag cgcaatgcgg
    12421 cggatgatct catcaatgtg gttaaattcg gttttctcgg tgcgcaggaa tttgcgccgc
    12481 gccggggtgt tgtagaacag atccagcacc tccagcgtcg tccccacagg atgcgccgcc
    12541 ggttttaccg tcacgttcat atcgcgccct tcggcatagg cctgccaggc ttcctgctgt
    12601 tctgcggtgc gtgaagtgag cgtcaggcgg gaaaccgaac tgatactcgc cagcgcctca
    12661 ccgcgaaagc ccaggctgat aatggcttcg agatcgtcca gagaggcgat tttactggtg
    12721 gcatgacgag ccagcgccag cgccagctca tcttttttga taccgcagcc gttatcacga
    12781 atgcggataa gtttcgcccc accgcgttcg atatcaatat cgatacgcgt cgcacctgca
    12841 tcgaggctgt tttccaccag ttctttgact accgacgcag gtcgctcgac cacctcacct
    12901 gcggcaatct ggttcgccag ttgtggcggt aagacctgaa ttggcatcaa tcgtccttag
    12961 tttggcagcg tgcgatctgg cgtcgtcacc gtactggccg tttgtgccgt tgcaccctgc
    13021 ggcgcagatt gcatcggatg cgcaaggaaa taattgcgca ggcctttgta aatggcttct
    13081 gccagctgtt gttggtaatc gtcgctcgcc agcaaacgtt cttcgctgtt gttgctgata
    13141 aaaccggttt cgaccagtac tgacgggata tccggcgaac gcagaacgcc gagactcgcg
    13201 tgttctggtc ggcgtttatg tatttcgcca atgcgttgca actgactgat catactggtc
    13261 gctacatcat accctacccg ctgggaatga ccgaactgta aatccagcac cgcctggctt
    13321 aaatagggat cagactgact gttcgccagc acatcgcccg ccccacccag cagctccgaa
    13381 tgtttctcgt gctgctccag ccagctggcc atttcgctgt tggcgcgacg gttagagagc
    13441 acccatacgg aagcgccagt cgcactgcgg ttcggtgcgg catcagcgtg aatcgacacg
    13501 aggaaattag cgttttgctt acgtgccaca tcgctgcgcc ccatcaccga aataaagtaa
    13561 tccccgtcac gggttaaaac gcctttaaac atcggatcgt cattgagcaa agtacgcaat
    13621 ttacgcgcga tggcgatggt gacatttttc tcccgcgtac caccggggcc gatagcgcca
    13681 gggtcctgac cgccgtgtcc ggcatcaata gcgatgataa ttttatcgcc agtgttagcc
    13741 gtcgcgcgcg ctgccggacg cgttaccgta ttactgctga taacacccgt agtgcggtta
    13801 ctttccgttt taaacggatt gcgcgccggt tcgctgacgc gcggtgcgac aaccgcaggc
    13861 gtttcaacgc gtttcgcaac cacgggcggc ggaggaggcg gtggcggcac atcggcgtta
    13921 atcgtaaaga cgacagtgta attgctgcca ttctgccgct tcaccgcttc ggttttacca
    13981 ttttcggtaa gatcgaccac cagccgtagc gtttgtgcat ctttaggcgt tccagagcga
    14041 atcgccttca ccagattatt gccgctgaac aacaacggca gtccctgaat cacgcccgtt
    14101 tgtttgatat cgagcgccac ggtgcgtttg ctttgatggc taaacgcata atcaggatcg
    14161 ccaataaaac tcaacgttat ccgcgcctgt tgattaccgt tagaaacctg aatatcagag
    14221 agcgtcgcgg cacccaccgg cgtgcacagc agcagcagcg tcgctaccaa ccaatttctg
    14281 atgcgataca tcatcccgcc acctttcaaa ggttaaccgg ctaaacgcgc cagcaacaat
    14341 tcacccgcag aggaaaccgc actcacgcgc gcctcacggc cttgtgcctg ataatcaatg
    14401 tgtatttcga catccgggtc aggaagaaca cctgtacctt gttgtggcca ctccaccagg
    14461 cagatggcat cgttggcaaa ataatcgcgg atccccataa actccagctc ctcgggatcg
    14521 gcaaggcggt acaaatcaaa gtgataaacc attaaattgt cgagcgtata gggttcgacc
    14581 agcgtataag tggggctttt gacattaccc tgatgaccca gagcttgtaa aaagccccgg
    14641 ctaaaggtgg tcttacctgc gcctaaatcg ccatacagat agattacggt tgcgccatcg
    14701 caggctttcg ctacccgctc gcccaggtct aatgttgcct gctcatcagg gagcggaatt
    14761 actcgattca tcatggtttt tatcagtcac ttccgggtta acaatacgct gtagcgtgga
    14821 aaagagatcg gttgccagca tcccgcgcgt tccaaaacgc gccgccagta cgtcagctgc
    14881 cgcaccgtgc gcgacacagc ccgcacaggc ggcatcatac ggcgacagtt tttgcccaag
    14941 caatgcgcca ataataccag agagcacatc gcccatgccg ccgctcgcca tgcctgcatt
    15001 tccggcatca ataatgccta aagcgtcagg atgggcggcg accacggttc cggcaccttt
    15061 cagcaccgct acgccgccat aacgttgtac cagacgtttg gcgcaatgta agcggtcact
    15121 ttcaatttca gcgacggaac agcctaacaa ccgtgcggcc tcgccaggat gcggcgtgat
    15181 cacgcgattg tgacgcttat cgggattgat tgccagcagg ttcaatgcat cggcatccca
    15241 caacatcggt ttgcgaaaat tctcaacttt ttgcagtgct tttttccccc actcttgctg
    15301 gcccagaccg ggaccaatca ccaccacatc ggcccattcc aggctttcgg taagagagtc
    15361 catcgtcagt tcatgcacca tcaattccgg tcgtgcagtc agcagcggcg caatgttttc
    15421 actgcgggtc agtactcgga ctaaaccagc accagcacgc agcgccgctt cccccgtcat
    15481 acgaatagcc cccgccgtgc cgtgatcgcc accgataatt accagccgcc cgtgatcgcc
    15541 tttatgcgaa gtcgggcgac gcggttttag ccagtgagaa agttgttctg ctgaaaaccg
    15601 ctgaattttc gtctcctgac ctgccagcca actatccagc cccagtgagt caaaatgcag
    15661 ttgtccggta acatcccgcg cttttccagt gagcaagcct ggtttcagcg caataaaagt
    15721 gatggagtga tcggcgttga tcaccgcgcc tggcgtagcg ccagtttcag ccagcaggcc
    15781 ggaagggata tcaaccgcca caatcggcgc aggatgggaa ttagcgtggt cgattaactg
    15841 gctaatggat tcgcggggcg cttgccgcaa accggtaccg agcagcgcat caacaatcag
    15901 atctaccgat tcgggccaga caatattcga agcatggatc tcgccacccg cgtttaacca
    15961 tgcttcgcgt gccagcgcgg cctcttccgg caacggtttg tcgctctcct gggcaaacaa
    16021 cgtgacctca atgccgaccg ctttggccag tcgcgcgacc acgtagccat cgccgccgtt
    16081 attaccatga ccgcacagca ccagccagtg gcgggcgtca ggatacgccg aacgacacac
    16141 ctggaatgcg gcctcgccag cgcgaagcat cagctcatag agtgtgagcc ccagcacatc
    16201 tgccgcctcg cgttctccgc ggcggatatc gtcggcgtac cagacggtgt gtggtatact
    16261 tacggggttt ttcttcattg tatggtccgt catgtcagag cccctcgatc tcaatcagtt
    16321 agcgcaaaaa attaaacagt gggggctgga actgggcttt cagcaggtag gtattaccga
    16381 taccgatctc agcgagtccg agcccaaact gcaagcatgg ctggacaaac aataccacgg
    16441 cgaaatggac tggatggcac gtcacggtat gctgcgcgct cgccctcatg agttattgcc
    16501 cggtacgctg cgcgtgatca gcgtgcggat gaattacctt cctgctaacg ccgcatttgc
    16561 cagcacgctg aaaaacccca aactcggcta tgttagccgt tatgcgctgg gccgtgacta
    16621 tcacaaactt ctgcgcaacc gactcaaaaa gctgggcgag atgattcagc aacattgtgt
    16681 ttcgctgaat tttagaccgt ttgtcgattc tgcgcctatt ctcgagcgcc cgttagctga
    16741 aaaagctggg ctcggctgga caggtaagca ctcacttatc ctcaatcgcg aggccggttc
    16801 gttcttcttt ttaggcgaat tgctggtcga tattccgctg cccgtggatc aaccagtcga
    16861 ggaaggatgc ggtaaatgcg tggcctgtat gacgatttgc ccgaccggtg ccatcgtcga
    16921 gccatatacc gtcgatgctc gccgctgtat ctcttatctc accatcgaac ttgaaggggc
    16981 gatcccggaa gagttgcgac cgttaatggg aaaccgtatt tacggttgcg atgactgcca
    17041 gcctatctgc ccgtggaatc gctattcaca actcaccaca gaagaggatt tcagcccgcg
    17101 taagccgcta cacgcaccgg aactcattga gttattcgcc tggagcgaag agaagttttt
    17161 aaaagtcacg gaaggatcgg cgattcgtcg aattggtcac ctgcgttggc tgcgtaatat
    17221 cgccgtagca ttaggcaatg ccccttggga tgaaacgatt ttgacagcgc tggaaagtcg
    17281 taaaggtggg cacccacttc tcgatgagca catagcgtgg gcgattgcgc agcaaataga
    17341 gagacgaaat gcgtgcatag tcgaagtgca attgccgaaa aaacagcgtc tggttcgggt
    17401 gattgaaaaa gggttaccgc gtgacgcctg attcatccac agcttgtgaa taaaaataaa
    17461 aacgcattgc aattcaagac gaataaaatc gtcaagtgat cgactcgaca aaacggaatc
    17521 ttaattttta acttatctat caataggtta aaaaaatact attcaccgtg cgaagtttct
    17581 ttgaaattaa gattacagcc tgaggctgtg gataactctg tttacaagag tttgtcagag
    17641 acaacgaaaa ccagcaataa cgcatcgctg tggatatttt attgagagaa gaatttggag
    17701 cgggaaacga gactcgaact cgcgaccccg accttggcaa ggtcgtgctc taccaactga
    17761 gctattcccg cttgggtggt ctgtgc
//
LOCUS       DADMIB010000082        17626 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.082, whole genome shotgun sequence.
ACCESSION   DADMIB010000082 DADMIB010000000
VERSION     DADMIB010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17626
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.082"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..662)
                     /locus_tag="JNZ89_002530"
     CDS             complement(<1..662)
                     /locus_tag="JNZ89_002530"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="catalyzes a two-step reaction, first charging a
                     glutamine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HAY8936374.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD
                     YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
                     MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
                     SDA"
     gene            complement(865..2811)
                     /gene="nagE"
                     /locus_tag="JNZ89_002531"
     CDS             complement(865..2811)
                     /gene="nagE"
                     /locus_tag="JNZ89_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetyl glucosamine transporter subunit
                     IIABC"
                     /protein_id="HAY8936375.1"
                     /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA
                     GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI
                     ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH
                     AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
                     FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV
                     TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
                     QNVWMLLVMGVVFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLNQL
                     ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI
                     VGAKAESIGDAMKKVVARGPVAAASAEATPSTAAPVAKPQAVPNAVSIAELVSPITGD
                     VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI
                     VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD
                     FSGLIIKAQGHVVAGQTPLYEIKK"
     gene            3144..3944
                     /gene="nagB"
                     /locus_tag="JNZ89_002532"
     CDS             3144..3944
                     /gene="nagB"
                     /locus_tag="JNZ89_002532"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008805656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HAY8936376.1"
                     /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
                     PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
                     NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
                     TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG
                     CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL"
     gene            4004..5152
                     /gene="nagA"
                     /locus_tag="JNZ89_002533"
     CDS             4004..5152
                     /gene="nagA"
                     /locus_tag="JNZ89_002533"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HAY8936377.1"
                     /translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQR
                     SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT
                     SDELMKQGVRVMREYLARHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC
                     ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY
                     NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA
                     PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM
                     ATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ"
     gene            5161..6381
                     /gene="nagC"
                     /locus_tag="JNZ89_002534"
                     /gene_synonym="nagR"
     CDS             5161..6381
                     /gene="nagC"
                     /locus_tag="JNZ89_002534"
                     /gene_synonym="nagR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NagC"
                     /protein_id="HAY8936378.1"
                     /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL
                     APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL
                     FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP
                     DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV
                     RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
                     RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYIGRHLGKTIAIAINLFN
                     PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR
                     AMLNGILLQHLLEN"
     gene            6429..7181
                     /gene="nagD"
                     /locus_tag="JNZ89_002535"
     CDS             6429..7181
                     /gene="nagD"
                     /locus_tag="JNZ89_002535"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide monophosphatase NagD"
                     /protein_id="HAY8936379.1"
                     /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNY
                     PSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA
                     GFTITDVNPDFVIVGETSSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC
                     AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI
                     LVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI"
     gene            7578..9242
                     /gene="asnB"
                     /locus_tag="JNZ89_002536"
     CDS             7578..9242
                     /gene="asnB"
                     /locus_tag="JNZ89_002536"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HAY8936380.1"
                     /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA
                     ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV
                     ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS
                     EMKSLVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALED
                     SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP
                     GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
                     RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA
                     MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFESYLPASVAWRQK
                     EQFSDGVGYSWIDTLKEVAAQQVSNQQLETARFRFPYNTPTSKEAYLYREIFEELFPL
                     PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK"
     gene            9623..9699
                     /locus_tag="JNZ89_002537"
     tRNA            9623..9699
                     /locus_tag="JNZ89_002537"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9657..9659,aa:Met,seq:cat)
     gene            9708..9792
                     /locus_tag="JNZ89_002538"
     tRNA            9708..9792
                     /locus_tag="JNZ89_002538"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9742..9744,aa:Leu,seq:tag)
     gene            9816..9890
                     /locus_tag="JNZ89_002539"
     tRNA            9816..9890
                     /locus_tag="JNZ89_002539"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9848..9850,aa:Gln,seq:ttg)
     gene            9925..9999
                     /locus_tag="JNZ89_002540"
     tRNA            9925..9999
                     /locus_tag="JNZ89_002540"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9957..9959,aa:Gln,seq:ttg)
     gene            10015..10091
                     /locus_tag="JNZ89_002541"
     tRNA            10015..10091
                     /locus_tag="JNZ89_002541"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10049..10051,aa:Met,seq:cat)
     gene            10140..10214
                     /locus_tag="JNZ89_002542"
     tRNA            10140..10214
                     /locus_tag="JNZ89_002542"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10172..10174,aa:Gln,seq:ctg)
     gene            10252..10326
                     /locus_tag="JNZ89_002543"
     tRNA            10252..10326
                     /locus_tag="JNZ89_002543"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10284..10286,aa:Gln,seq:ctg)
     gene            complement(10480..11655)
                     /gene="ubiF"
                     /locus_tag="JNZ89_002544"
     CDS             complement(10480..11655)
                     /gene="ubiF"
                     /locus_tag="JNZ89_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706550.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
                     hydroxylase"
                     /protein_id="HAY8936381.1"
                     /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVA
                     DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKL
                     PLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRDNDLQELELKGGETIRAKL
                     VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL
                     FDNWASLVWYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL
                     QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY
                     QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFVRNLGLMAAERAGVLKRQALKYALGL"
     gene            11801..13225
                     /gene="miaB"
                     /locus_tag="JNZ89_002545"
     CDS             11801..13225
                     /gene="miaB"
                     /locus_tag="JNZ89_002545"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HAY8936382.1"
                     /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
                     LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
                     FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
                     CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGSTGSF
                     ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL
                     MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPSETTEDFEKTMKLIADVNFDMSY
                     SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
                     SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV
                     AETPESVIARTRKENDLGVGYYQP"
     gene            13339..14418
                     /locus_tag="JNZ89_002546"
     CDS             13339..14418
                     /locus_tag="JNZ89_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HAY8936383.1"
                     /translation="MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQ
                     LERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLTI
                     KEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG
                     KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFE
                     MLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNS
                     KAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYE
                     AWEEAEQKRKAALAAERKREEQEQK"
     gene            14415..14882
                     /gene="ybeY"
                     /locus_tag="JNZ89_002547"
     CDS             14415..14882
                     /gene="ybeY"
                     /locus_tag="JNZ89_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014169133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HAY8936384.1"
                     /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR
                     VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK
                     PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE"
     gene            14972..15850
                     /gene="corC"
                     /locus_tag="JNZ89_002548"
     CDS             14972..15850
                     /gene="corC"
                     /locus_tag="JNZ89_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308723.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HAY8936385.1"
                     /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS
                     GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
                     FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS
                     QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA
                     SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
                     VHVKIPDDSPQPKLDE"
     gene            15875..17413
                     /gene="lnt"
                     /locus_tag="JNZ89_002549"
     CDS             15875..17413
                     /gene="lnt"
                     /locus_tag="JNZ89_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HAY8936386.1"
                     /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL
                     QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS
                     LYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
                     KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP
                     EKTIQVSMVQGDIPQSLKWDGDQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN
                     QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN
                     KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSVNGIELTAAICYEIIL
                     GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA
                     VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR
                     ARKR"
BASE COUNT         4298 a         4635 c         4556 g         4137 t
ORIGIN      
        1 gcatcgctga tgcagtgggt gaagtcgtac atcgggtaga tgcaccactt gttgccagtc
       61 tggtggtgtt cagcaaattt aatgcggtac agcaccggat cgcgcatcac gataaacggt
      121 gaagccatgt cgattttcgc acgcaggcag gctttacctt cttcaaaacc accggcacgc
      181 attttttcga acagcgccag gttctcttca acgctgcggt cgcggtacgg gctgttttta
      241 cccggttgcg tcagggtgcc gcggtattcg cggatctgtt ccggcgtcag ttcatcaacg
      301 tacgccaggc ctttattgat cagttcgatc gcataggcgt ggagctgatc aaaataatcg
      361 gaggagtaac ggacgttacc agaccagtga aaacctaacc actctacgtc gtttttgatc
      421 gactcaacat actcgatatc ttcttttacc gggttagtgt cgtcgaaacg caggttgcac
      481 tggcctttat agtcctgggc gatcccgaag ttcaggcaga tagatttcgc atggccaata
      541 tgcagatagc cattcggctc cggcgggaaa cgggtgtgta ctgtggtgtg cttaccactg
      601 gccagatctt catcgatgat ctgacggata aagttagtcg ggcgggcttc tgcctcactc
      661 atcgtggatt cctcaaagcg taaacaacgt ataacggcgt atgatcttat aagcggaaca
      721 ggctgacaac tgttagtttt ttaaaattga taatctaaca aggattatgg ggatgattga
      781 tgaaaaaaaa agcggcagag aagatctcca ccgcttgtca ttgttggatg cgacgctcaa
      841 gcgtcgcatc aggcataaag cagattactt tttgatttca tacagcggtg tttgacccgc
      901 cacaacatgg ccctgagctt taatgatcaa gccactgaaa tcgtcgatat tgctgcaaac
      961 caccgggcta atcatcgagc gggcgttagc gttcaggtaa tccagatcca tttccagaat
     1021 cggttgccct gcgcttacct gcgcaccctc ttccaccaga cgtttaaagc ctttaccttc
     1081 cagcgctacg gtgtcgatac ccatatggac gacgatctcc gcgccttttt cggtttccag
     1141 gcagaacgcg tggttggtgt tgaagatttt cacgattgtc cctgcggctg gtgatacgac
     1201 gattttatct gtcggtttca ccgccacacc gtcacccacc gctttgctgg cgaatgcttc
     1261 gtcaggaacc tgatccagtg ccacgacatc accggtaatc ggcgatacca gctccgcgat
     1321 agataccgcg tttggtacag cctgcggttt tgctacaggc gcggcagttg acggagttgc
     1381 ttcagctgac gcagcggcta ccggaccacg ggcaacgact ttcttcatcg catcgccgat
     1441 ggattctgct ttcgcgccaa caatcacctg aatagtctgt ttgttcagtt tcactacacc
     1501 agaagcaccc agacgtttac acatcgtatc gttgacgcgg gcagagtcag ccacggtcag
     1561 gcgcagacgg gtgatacagg cgtcaattgc tttcaggttg tcagtgccgc caaccgcagc
     1621 aatatagttg gtcgccagtt gattgaggcc ttcttcagtg ttgctgttgg cttcttcagt
     1681 aacgatctca tcttctttat cttcacgacc cggcgttttc aggttgaaca tgcggataac
     1741 caaactgaac accacgaagt agatagcgaa gaagacaaca cccatcacca gcagcatcca
     1801 gacgttctgg ctggcggccg gcaggttata catcaacgcg tagtcgatag cccccgcaga
     1861 gaaagagaag ccagcatgga tacccagcag tgttgccaca aacaggctga taccggtcag
     1921 cagtgcgtgc aggaggtaca gcagcggtgc aaggaacatg aacaggaatt ccagcggctc
     1981 agtcacaccg gtcaggaacg cagtaacagc aacagaaagc agcatcccgc caaccatcgg
     2041 acgacgctct ttcggtgctg cgaagtacat cgccagcgcc gcacccggca gaccgaacat
     2101 cataatcggg aagaagccgg acatgaacat ccccgcggtg ccgtcaccgg catagaagcg
     2161 gttgatatca ccgtggaaaa ccgtacccgc cgcgttggtg aattcaccaa tctggaacca
     2221 ggcgatggtg ttcagcacct gatgcagacc ggttgggatc agcagacggt tgatgaaacc
     2281 aaagataccg gaacccagcg cgcccgcaga aacgatccac tcgcctcctg catggatagc
     2341 gtgctgtacc ggcggccaga cgtaaccaaa aatggccgcc agcaccaggc agaagaagcc
     2401 ggtggcaatc ggcacaaagc gtttgccgcc gaagaagctc aggaagtccg gcagtttaat
     2461 atcggaccaa cggttatagg ctgcgccacc aaccagaccg gtaatgatac ccgccagtac
     2521 acccatgttt atttctgggt tgatggtcac catcgctttg gttaacacaa agtaacctac
     2581 cgcacccgcc agcgccgccg cacctgcgct gtctttcgac cagctggatg ccacaccgat
     2641 ggcgaagatt aatgcgaggt tatcaaaaat cgcaccgccc gcctgggcaa taaacgcaac
     2701 gttaagtaaa tctggctgac cgaatcgcag caacagtgcc gccaccggca gcaccgcgat
     2761 agggagctgt aacgccctac cgagtcgctg gaaaaaacct aaaatattca tcttattccc
     2821 cctacgagaa ccctatttgg ctcgtttaaa gccgtatttt tattttgctg caaattgtac
     2881 tgccgatgtt ctgtaatcag attgttagat catctgctac agagtgtgtg aaaatttaat
     2941 tcgtatcgca aattaaacgc gtgtcttttg tgagttttgt caccaaatat cgttatcatc
     3001 actccctttt actggctaaa ccagaaaact tattttatca ttcaaaaaat caggtcggat
     3061 tgacgcctgt ctgcgcaaat ccaagttacg cttaaagatg cctaatccgc caacggctta
     3121 cattttactt attgaggtga ataatgagac tgatccccct gactaccgct gaacaggtcg
     3181 gcaaatgggc tgctcgccat atcgtcaatc gtatcaatgc gttcaaaccg actgccgatc
     3241 gtccgtttgt tctgggcctg ccaactggcg gcacgccgat gaccacctat aaagcgttag
     3301 tcgaaatgca taaagcaggc caggtcagct ttaagcacgt tgtcaccttc aacatggacg
     3361 aatatgtcgg tctgccgaaa gagcatccgg aaagctacta cagctttatg caccgtaatt
     3421 tcttcgatca cgttgatatt ccagcagaaa acatcaacct tctcaacggc aacgccccgg
     3481 atatcgacgc cgaatgccgc cagtatgaag aaaaaatccg ttcttacgga aaaattcatc
     3541 tgtttatggg cggtgtaggt aacgacggcc atattgcatt taacgaaccg gcgtcttctc
     3601 tggcttctcg tactcgtatc aaaaccctga ctcatgacac tcgcgtcgcg aactctcgtt
     3661 tctttgataa cgatgtcaat caggtgccaa aatatgccct gactgtcggt gttggtacat
     3721 tgctggatgc cgaagaagtg atgattctgg tgctgggtag ccagaaagca ctggcactgc
     3781 aggctgcagt tgaaggttgc gtgaaccaca tgtggaccat cagctgtctg caactgcatc
     3841 caaaagcgat catggtgtgc gatgaacctt ccaccatgga gctgaaagtt aagactttaa
     3901 gatatttcaa tgaattagaa gcagaaaata tcaaaggtct gtaattgtta tccctgccct
     3961 ggctccttgc tcagggcaat attttttaaa atcgggggtc agaatgtatg cattaaccca
     4021 gggccggatc tttaccggcc acgaatttct tgatgaccac gcggttgtta tcgctgatgg
     4081 cctgattaaa agcgtctgtc cggtagcgga actgccgcca gagatcgaac aacgttcact
     4141 gaacggggcc attctctccc ccggttttat cgatgtgcag ttaaacggct gcggcggcgt
     4201 acagtttaac gacaccgctg aagcggtcag cgtggaaacg ctggaaatca tgcagaaagc
     4261 caatgagaaa tcaggctgta ctaactatct gccgacgctt atcaccacca gcgatgagct
     4321 gatgaaacag ggcgtgcgcg ttatgcgcga gtacctggca agacatccga atcaggcgtt
     4381 aggtctgcat ctggaaggtc cgtggctgaa tctggtaaaa aaaggcaccc ataatccgaa
     4441 ttttgtgcgt aagcctgatg ccgcgctggt cgatttcctg tgtgaaaacg ccgacgtcat
     4501 taccaaagtg accctggcac cggaaatggt tcctgcggaa gtcatcagca aactggcaaa
     4561 tgccgggatt gtggtttctg ccggtcactc caacgcgacg ttgaaagaag cgaaagccgg
     4621 tttccgcgcg gggattacct ttgccaccca tctgtacaac gcgatgccgt atattaccgg
     4681 tcgtgaaccg ggcctggcgg gcgcgatcct cgacgaagct gacatttatt gcggtattat
     4741 cgctgatggc ctgcatgttg attacgccaa cattcgtaac gctaaacgcc ttaaaggcga
     4801 caaactgtgt ctggttaccg acgccaccgc gccagcaggt gccaacattg aacagttcat
     4861 ttttgcgggt aaaacaatat actaccgtaa cggactttgt gtggatgaga acggtacgtt
     4921 aagcggttca tccttaacca tgattgaagg cgtgcgtaat ctggtcgaac attgcggtat
     4981 cgcactggat gaagtgctgc gtatggcgac gctctatccg gcgcgtgcga ttggcgttga
     5041 gaaacgtctc ggcacactcg ccgcaggtaa agtagccaac ctgaccgcat tcacacctga
     5101 ttttaaaatc accaagacca tcgttaacgg taacgaggtc gtaactcaat aagagaaagt
     5161 atgacaccag gcggacaagc tcagataggt aatgttgatc tcgtaaaaca gcttaacagc
     5221 gcggcggttt atcgcctgat tgaccagtac gggccaatct cgcggattca gattgccgag
     5281 caaagccagc ttgcccccgc cagcgtaacc aaaattacgc gtcagcttat cgaacgcggg
     5341 ctgatcaaag aagttgatca gcaggcctcc accgggggcc gccgcgctat ctccatcgtc
     5401 accgaaaccc gcaatttcca cgcaatcggc gtacggcttg gtcgtcacga cgccaccatc
     5461 accctgtttg atctcagcag caaagtgctg gcagaagaac attacccgct gccggaacgt
     5521 acccagcaaa cgctggaaca tgccctgttg aatgccattg ctcagtttat tgatagctac
     5581 cagcgcaaac tgcgcgagct gatcgcgatt tcggtgatcc tgccagggct tgttgacccg
     5641 gacagcggca aaattcatta catgccgcat attcaggtag aaaactgggg gctggtagaa
     5701 gctctggaag aacgttttaa agtgacctgt ttcgttggtc acgatatccg tagtctggcg
     5761 ctggcggagc actacttcgg tgcaagtcag gattgcgaag actccattct ggtgcgtgtc
     5821 catcgcggaa ccggggccgg gattatctct aacgggcgca tttttattgg ccgcaacggt
     5881 aacgtcggtg aaattggcca tattcaggtc gaaccgctgg gtgaacgctg ccactgcggc
     5941 aactttggct gcctggaaac tatcgccgcc aacgctgcca ttgaacaacg ggtgttgaat
     6001 ctgttaaagc agggctacca gagccgcgtg ccgctggacg actgcaccat caaaactatc
     6061 tgcaaagccg cgaacaaagg cgatagtctg gcgtcggaag taattgagta tatcggtcgt
     6121 catctgggta aaaccatcgc cattgctatc aacttattta atccgcaaaa aattgttatt
     6181 gccggtgaaa tcaccgaagc cgataaagtg ctgctccctg ctattgaaag ctgcattaat
     6241 acccaggcgc tgaaggcgtt tcgcactaat ctgccggtgg tacgttctga gctggatcac
     6301 cgctcggcaa tcggcgcttt tgcgctggta aaacgcgcca tgctcaacgg tattttgctc
     6361 cagcatttgc tggaaaatta atgtgctttt atagtggcgc ttattgttgt caatattctg
     6421 ggtagtccat gaccattaaa aatgtaattt gcgatatcga cggcgtgctg atgcacgata
     6481 acgtcgccgt accgggtgca gcggaatttt tgcacgggat tatggataaa ggcctgccgc
     6541 tggtgttgct gaccaactat ccttcgcaga ctgggcaaga tctggcgaac cgctttgcca
     6601 ccgcaggtgt cgatgtacct gacagcgtgt tttatacctc tgcgatggcg actgccgatt
     6661 tcctgcgtcg ccaggaaggc aagaaagcgt atgtggtggg cgaaggcgca ctgattcatg
     6721 aactgtacaa agccggtttc actattaccg atgtgaaccc tgatttcgtg attgttggcg
     6781 aaacgagttc ctacaactgg gacatgatgc ataaagcagc ctatttcgtc gctaacggtg
     6841 cacgttttat cgccaccaat ccggacaccc acgggcgcgg tttttatccc gcgtgtggcg
     6901 cgttgtgtgc aggcatcgaa aaaatctccg ggcgtaaacc gttctatgtt ggtaaaccga
     6961 gtccgtggat catccgcgcg gcattaaaca aaatgcaggc gcattcggaa gaaacggtga
     7021 ttgtcggcga taacctgcgt accgatattc tggcgggctt ccaggcaggt ctggaaacga
     7081 ttctggtgct ttctggtgtt tcatcgctcg acgatatcga cagtatgccg ttccgcccaa
     7141 gctggattta cccgtcggtc gctgaaatcg acgttatctg aatagcaacc acgtctgcgg
     7201 acgtggttgg ctctgatgac aaacgccaaa ctgcctgatg cgctacgctt atcaggccta
     7261 cgcagctcct gcaatatatt gaattttcat gcttttgtag gccggataag gcgttcacgc
     7321 cgcatccggc atgaacaaat tgcactttgt cagcaatttg gcccccgtaa aatacaaaca
     7381 ttcaataaaa cccgctgaaa attatcgatt catcaataaa tatatcctca caccagacct
     7441 tttttcacca atcgacaatc accattacgt tttttatttt ttcaccgcca aatcgcttgc
     7501 gcacagtgct gatttgcggc atttttttaa acaagcaaac acaacaagca acaaatacca
     7561 gattaacgga gaaggttatg tgttcaattt ttggcgtatt cgatatcaaa acagacgcag
     7621 ttgagctgcg taagaaagca ctcgagctgt cacgcctgat gcgtcatcgt ggcccggact
     7681 ggtccggtat ttatgccagc gataacgcca ttctcgctca cgaacgtctg tcaattgttg
     7741 acgttaacgc gggggcgcaa cctctctaca accaacaaaa aacccacgta ctggcggtaa
     7801 acggtgaaat ctacaaccac caggcattgc gcgctgaata tggcgatcgt tatcagttcc
     7861 agacagggtc tgactgtgaa gtgatcctcg cgctgtatca ggaaaaaggg ccggaatttc
     7921 tcgacgactt gcagggcatg tttgcctttg ccctgtacga cagcgaaaaa gatgcctacc
     7981 tgattggtcg cgaccatctg gggatcatcc cactgtatat gggctatgac gaacacggtc
     8041 agctgtatgt ggcctcagaa atgaaatcgc tggtgccagt ttgccgcacg attaaagagt
     8101 tcccggcggg gagctatttg tggagccagg acggcgaaat ccgttcttat tatcatcgcg
     8161 actggttcga ctttgatgca gtgaaagata acgtgaccga caaaaacgag ctgcgtcagg
     8221 ctctggaaga ttccgttaaa agccatctga tgtctgatgt gccttacggt gtgctgcttt
     8281 ctggtggtct ggattcctca attatttccg ctatcaccaa gaaatacgca gcccgtcgcg
     8341 tggaagatca ggaacgctct gaagcctggt ggccgcagtt acactccttt gctgtaggtc
     8401 tgccgggttc accggatctt aaagcagccc aggaagtggc aaaccatctg ggcacggtgc
     8461 atcacgaaat tcacttcact gtacaggaag gtctggatgc catccgcgac gtgatttacc
     8521 acatcgaaac ttatgatgtg accactattc gcgcttcaac accgatgtat ttaatgtcgc
     8581 gtaagatcaa ggcgatgggc attaaaatgg tgctgtccgg tgaaggttct gatgaagtgt
     8641 ttggcggtta tctttacttc cataaagcgc ccaacgctaa agaactgcat gaagagacgg
     8701 tgcgtaaact gctggccctg catatgtatg actgcgcgcg cgccaacaaa gcgatgtcag
     8761 cctggggcgt ggaagcacgc gttccgttcc tcgacaaaaa attccttgat gtggcgatgc
     8821 gcattaaccc gcaggataaa atgtgcggta acggcaaaat ggaaaaacac atcctgcgtg
     8881 aatgttttga gtcatacctg cccgcaagcg tggcctggcg gcagaaagag cagttctccg
     8941 atggcgtcgg ttacagttgg atcgacaccc tgaaagaagt ggcggcgcag caggtttcta
     9001 atcagcaact ggaaactgcc cgcttccgct tcccgtacaa cacgccaacc tcaaaagaag
     9061 cgtatctgta ccgggagatc tttgaagaac tgttcccgct tccgagcgcc gctgagtgcg
     9121 tgcctggcgg tccttccgtc gcgtgttctt ccgctaaagc gatcgaatgg gatgaagcgt
     9181 tcaagaaaat ggacgatcca tctggtcgtg cggttggtgt tcaccagtcg gcatataagt
     9241 aagaaatgcg aaacagcccc ggtgaaatcc ggggctgttt cagttattga ggtgcttgtt
     9301 gattctgata tgcagtaagg aaatgttccg ggtttgccac atcactgttt gacaactcat
     9361 cactgtaggc cagtatttca tagattaatt tcccaccact attgttgaat tccgaatttc
     9421 atcctgtacg acaaaagaat ggctgtaggg tggggaaaaa acacaaagta aacaataatt
     9481 gacgaatata gcgccacgct gttcgcaacc taaccaaata gtcactttcg agcaattttc
     9541 cttgaaaaag aggttgacgc tgcaaggctc tatacgcata atgcgccccg caacgccgat
     9601 aaggtatcgc gaaaaaaaag atggctacgt agctcagttg gttagagcac atcactcata
     9661 atgatggggt cacaggttcg aatcccgtcg tagccaccat ctttttggcg ggagtggcga
     9721 aattggtaga cgcaccagat ttaggttctg gcgccgcaag gtgtgcgagt tcaagtctcg
     9781 cctcccgcac cattcaccag aaagtgttgt acggatgggg tatcgccaag cggtaaggca
     9841 ccggtttttg ataccggcat tccctggttc gaatccaggt accccagcca tcttcttcga
     9901 gtaagcggtt caccgcccgg ttattggggt atcgccaagc ggtaaggcac cggtttttga
     9961 taccggcatt ccctggttcg aatccaggta ccccagccat cgaagaaaca atctggctac
    10021 gtagctcagt tggttagagc acatcactca taatgatggg gtcacaggtt cgaatcccgt
    10081 cgtagccacc aaattctgaa tgtgtcgaat acgttcggca aattcaaaaa ccaatttgtt
    10141 ggggtatcgc caagcggtaa ggcaccggat tctgattccg gcattccgag gttcgaaccc
    10201 tcgtacccca gccaatttat tcaagacgct tacatcgtaa gtgcacccag ttggggtatc
    10261 gccaagcggt aaggcaccgg attctgattc cggcattccg aggttcgaat cctcgtaccc
    10321 cagccacatt aaaaaagctc gcttcggcga gctttttgct tttctgcgtt cattcaatgt
    10381 cgaatgcgat gttgacacgt cttatccttc aatgtcggat gcgacgctgc cgcgtcttat
    10441 ccgacctacg gttggcacgc atccggcaat gttgtaaggc tacaacccta acgcatattt
    10501 cagcgcctga cgtttcaaca cgccagcacg ctctgccgcc attaacccga gattacgcac
    10561 aaaacgcagc ggcggcagat tattactgaa tccggcataa aacagatcca taccactttg
    10621 cataatgaag ttatccgcca tgcgccgcat ctggtaacgc ttgaggacag gataactggc
    10681 ccacgcttca ccgtaactgc gggcattcac cagaacatca atcagggcat cgacatcacg
    10741 ataaccaaga ttcaccccct gccccgccag cggatggatg gtatgcgcgg catcgcccac
    10801 cagcgcaagc cccggctgca catactgcaa cgcatgtcgg cgcgtcagcg gaaacgcacc
    10861 agcggcaagc ggtgtaacgt aacccagacg cgacgggaaa tgcttcgcga tttccgcctg
    10921 gagttgcgcc atattcatat tctgcaactg gcgaatacgc gccggagagt cataccacac
    10981 cagcgatgcc cagttatcaa acaacggcag aaacgcacgc ggtccgtccg gggtaaattg
    11041 ctgccaggtg ctgtcgccgg gatcgttctc acactgtacg ctaatcaaca tgcacgactg
    11101 cgcatactgc caggcatgaa cgccaattcc cgccatctgc cgcacctgag aatttgcgcc
    11161 gtcggcacca atcaccagtt tcgcgcggat cgtttcaccg cccttcagtt ccagctcctg
    11221 aagatcatta tctcgatgta atgcaatcag cgagcctggc acacgtaacg ttactttcgg
    11281 atgcgcttcc agcgcctgcc acagcgcctg ttgcaggacg gtgttttcca ccatatagcc
    11341 aagcaacggt agcttaagtt cagcggcgtc aaacaccaca tgcgccgttt cccactccca
    11401 cgtttccagt ctgcggtaag gatggcaacg catagcctgt actgcatccc agacccctaa
    11461 ccctttaagc aatgataccg atgcggcgct gatcgccgag atccgcacgt ccggttggct
    11521 atcagcgaca aacggtgcag gttctgcgtg ctcgatcacc gttaccgaaa atccgtgctg
    11581 tgccagcccc agcgccagcg cgccgccgac cattcctccg ccgacaatgg caatttccgt
    11641 tggttgattt gtcatggtca atcatcctgt tagcaatatg ctttaagttt acaggatttt
    11701 tacccccaag ggctgataac gctcatactg gccacaacgg cagcaaagca ttacactatg
    11761 cgccctgcat tcctggctac tatttcgcaa gagcaagtcg atgaccaaaa aactccatat
    11821 taaaacctgg ggctgtcaga tgaacgagta cgattcatcg aagatggccg atctgctgga
    11881 tgccacccac ggctatcaac tgaccgacgt ggcggaagaa gcggatgtgc tgctgctgaa
    11941 cacctgctca atccgcgaga aggctcagga aaaagtcttc catcagttgg gtcgctggaa
    12001 actgttaaaa gagaagaatc cagacctgat tatcggcgtc ggtggctgcg tggcatcgca
    12061 agaaggcgag cacattcgcc agcgcgccca ctatgtcgat attatttttg ggccgcaaac
    12121 gctgcaccgt ctgccggaga tgatcaactc cgtgcgcggc gaccgcagcc cggttgtaga
    12181 tatcagcttc ccggaaatcg agaagtttga ccgtctaccg gaaccgcgcg ccgaagggcc
    12241 gaccgcgttt gtctccatca tggaaggctg caataaatat tgcacctact gcgtggtgcc
    12301 ttacacccgt ggtgaagagg taagccgtcc gtctgacgat attctgtttg agattgccca
    12361 gcttgcggct cagggcgtgc gtgaagtcaa cctgctcggt cagaacgtga acgcctggcg
    12421 tggtgaaaac tacgacggct ccaccggatc gtttgccgat ctgctgcgtc tggttgctgc
    12481 gatcgacggg atcgatcgta ttcgctttac caccagccat ccgatcgaat tcaccgacga
    12541 tatcatcgaa gtgtatcgcg acacgccgga gctggtgagc ttcctgcatc tgccggtaca
    12601 gagcggttcc gatcgcattc tgaacctgat gggccgtact catacggcac tggagtacaa
    12661 agcgatcatc cgtaaactgc gtgcggcgcg tccagatatt cagatcagtt ctgatttcat
    12721 cgttggcttc cctagcgaaa ccaccgaaga cttcgagaaa acgatgaagc tgattgccga
    12781 cgtcaatttc gacatgagct acagctttat cttctctgca cgtccgggta caccagccgc
    12841 cgatatggtt gatgatgttc cggaagaaga gaagaagcag cgtctgtata ttctgcaaga
    12901 acgtatcaat cagcaagcga tggcatggag ccgccggatg ctcggcacca cccagcgtat
    12961 tctggtagaa gggacttcgc gtaagagcat catggagctt tccgggcgta ccgaaaataa
    13021 ccgcgtggtc aacttcgagg gcacaccgga tatgatcggt aaattcgtcg atgtagaaat
    13081 taccgacgtc tacccgaact ctctgcgcgg taaagtggtg cgtactgaag atgaaatggg
    13141 cctgcgcgtg gcagaaacac cggaatcggt gattgcccgt acccgcaaag aaaacgacct
    13201 tggcgtgggt tattatcagc cgtaattctc aggcccgccg ttccggtggg ccttgttttt
    13261 tctctcttta tccccatctt tatcgcaatg cttgcgcctt tttcctgtgg cgtgaataat
    13321 ttccttatag gccggtgaat gttcagcttc cggcggcata cagataagag gaacggtttg
    13381 aacatagaca ctcgcgaaat caccctggag ccagcagaca acgcgcgtct gttgagcctg
    13441 tgcggcccgt ttgatgacaa catcaagcag ctcgaacgcc gtctcggcat cgagatcaat
    13501 cgccgcgaca accactttaa actgaccggc cgtccgattt gcgtcaccgc tgcggcagac
    13561 attctgcgta gcctgtatgt cgatacagcc ccgatgcgcg gtcagattca ggatatcgaa
    13621 ccggaacaga tccaccttac gattaaagaa gcgcgagtac tggagcaaag tgcggagagc
    13681 gtgccggagt acggcaaagc ggtcaatatc aaaaccaaac gcggcgtaat taagccgcgc
    13741 acgccaaacc aggcgcagta catcgccaat attctcgacc atgacattac cttcggcgtt
    13801 ggcccggcgg gtacgggtaa aacctacctg gcagtggctg cggcagttga tgccctggag
    13861 cgtcaggaga ttcgccgtat tctgctgact cgtccggcgg tcgaagccgg tgagaaactg
    13921 ggcttcctgc ctggcgattt aagccagaaa gtagacccgt atctgcgccc actgtacgac
    13981 gcgctgtttg aaatgctggg ctttgagaaa gttgagaaac tgattgagcg caacgttatt
    14041 gaagtcgcgc cgctggccta tatgcgtggt cgtacgctga acgacgcgtt tatcattctc
    14101 gatgagagcc agaacaccac catcgaacag atgaagatgt tcctgacccg tatcggtttt
    14161 aactcaaaag cggttatcac cggcgacgtc acacagatcg acctgccgcg taatactaaa
    14221 tcaggcttac gtcacgccat cgaagtactg gccgatgtcg aagagatcag ctttaacttc
    14281 ttccacagcg aagacgtggt tcgtcaccct gtggtggcgc gtatcgttaa cgcctatgaa
    14341 gcctgggaag aagccgaaca aaaacgaaaa gcggcgctgg cggcagaacg caagcgcgaa
    14401 gaacaggaac aaaaatgagt caggtgatcc tcgatttaca actggcatgt gaagataatt
    14461 ccgggttacc ggaagagagc cagtttcaaa catggctgaa tgcggtgatc ccgcagtttc
    14521 aggaagaatc ggaagtgact attcgcgtgg tcgataccgc cgaaagccac agtctgaatc
    14581 tgacctatcg cggtaaggat aagccgacca acgtgctctc cttcccgttt gaagtgccgc
    14641 ctggcatgga aatgtcgcta ctgggcgatc tggttatctg ccgtcaggtg gttgagaagg
    14701 aagctcagga gcaaggcaaa ccactggagg cgcactgggc gcatatggtg gtgcacggca
    14761 gtctgcattt gttaggttac gatcacatcg aagatgacga agcagaagaa atggaagccc
    14821 tcgaaacaga gattatgctt gctctgggct atgaggatcc gtacattgcc gagaaagaat
    14881 aatttgccag gcatttgact ggcagacgtc cccgccgttg gtgattaacg acggcgtttt
    14941 gattaactaa catgagaacc catacgacgc catgagcgac gacaattcac acagtagtga
    15001 cactataagc aacaagaagg gatttttctc cctgttactc agccaacttt tccacggtga
    15061 accgaaaaac cgtgacgaac tgctggcgct gatccgtgat tccgggcaga acgaccttat
    15121 cgacgaagat acgcgcgata tgctcgaagg ggtgatggac atcgcagacc aacgcgttcg
    15181 cgacatcatg atcccccgct cccagatgat taccctgaaa cgcaaccaga cgctggacga
    15241 atgccttgat gtcatcatcg agtccgccca ctcacgtttc ccggtgatta gcgaagacaa
    15301 agatcacatt gaagggattc tgatggcgaa agacttgctg ccgtttatgc gcagcgatgc
    15361 tgaagccttc agcatggaca aagtgttacg tcaggcggtt gtcgttcctg aaagtaagcg
    15421 cgtagaccgg atgctgaaag agtttcgctc tcagcgttac cacatggcga tcgtcattga
    15481 cgaattcggt ggggtttccg gtctggtgac cattgaagac atcctggaac tgattgttgg
    15541 tgagattgaa gacgaatatg acgaagaaga tgatatcgac ttccgtcagc tgagtcgtca
    15601 tacctggacc gtgcgcgcac tggcttccat tgaagacttc aacgaagcgt tcggcaccca
    15661 ctttagcgat gaagaagtcg acactatcgg tggtctggtg atgcaggcgt ttgggcatct
    15721 tccggcgcgt ggcgaaacta tcgacatcga cggttaccag ttcaaagtgg cgatggccga
    15781 cagtcgacgt attattcagg ttcatgtcaa aatcccggat gactcacccc agccgaagct
    15841 ggatgaataa aaccgaaact ggatagataa ctacatggct tttgcctcat taattgaacg
    15901 ccagcgcatt cgcctgctgc tggcgttatt attcggtgcc tgcggaacgc tggccttctc
    15961 tccttacgac gtctggcctg cggcgattat ttcgttgatg gggcttcagg cgttgacctt
    16021 taaccgccgt ccactccagt ctgccgctat tggcttttgc tggggatttg gcctctttgg
    16081 cagcggtatt aactgggtct atgtcagcat cgcgaccttt ggcggaatgc ctggcccggt
    16141 taacatcttc ctggtggtgc tgctggcggc gtatttgtcg ctgtataccg gactgtttgc
    16201 tggcgtgctg tcgcgtctgt ggccgaaaac cacctggctg cgcgtggcga ttgccgcccc
    16261 tgctctctgg caagtgaccg agtttctgcg cggttgggta ctgacaggct tcccgtggtt
    16321 acagttcggc tatagccaga ttgatggccc gttaaaaggg ctggcaccga taatgggcgt
    16381 ggaagccatt aacttcctgc tgatgatggt tagtggcctg ctggcactgg cgttggtcaa
    16441 acgcaactgg cgtccgctgg tggtggccgt cgtgctgttt gccctaccct tcccgctgcg
    16501 ttacatccaa tggtttaccc cgcaaccgga gaaaaccatt caggtttcga tggttcaggg
    16561 cgatattccg caatcactga aatgggatgg agatcagctt cttaatacgc tgaagattta
    16621 ctacaacgca acggctccgc tgatgggcaa atcatcgttg attatctggc cggagtcggc
    16681 gataaccgat ctggaaatta atcagcaacc gttcctcaaa gcactggacg gtgagttgcg
    16741 cgataaaggt agctcgctgg taaccgggat tgtcgacgcg cgtctcaata agcagaaccg
    16801 ctacgatacc tacaacacca tcatcacact gggtaaaggt gcaccgtaca gctacgaatc
    16861 agccgatcgc tataacaaaa accatctggt gccgtttggc gagtttgtcc cgctggagtc
    16921 gattctgcgt ccgttagcac cgttctttga tctgccgatg tcgtcgttca gccgtgggcc
    16981 atatatccag ccgccgctgt cagtaaatgg tattgagctt actgcggcta tttgctacga
    17041 gatcattctc ggcgagcaag tgcgcgataa cttccgcccg gataccgact atctgctgac
    17101 tatctccaac gatgcgtggt ttggtaaatc tattggtcca tggcaacact tccagatggc
    17161 gcgaatgcgt gcgctggagc tggcgcgccc actgttgcgc agcaccaaca acggcattac
    17221 ggcggtgatt ggcccgcagg gtgagattca ggcgatgatc ccgcagttca cccgcgaggt
    17281 gttaaccact aatgtgacac cgaccaccgg actcacaccg tatgcacgta ccggcaactg
    17341 gccactgtgg gtgctgacgg cactgtttgg ttttgccgct gtgttgatga gtctgcgagc
    17401 acgtaaacgt tgatgtgcct gatgtatcct gcatgagcaa aacgtacttt ctcattgagc
    17461 tttggggcat ggttatcatg cccctttttc ttacggttca gggatacaag ccacattgcc
    17521 atattgggga tgacgaataa ttgcctgcgg atcaagcgag cgcgtcctgt ccatttggat
    17581 caacccgttc ttcgccatga caaatatttt tctaccatcc gctgaa
//
LOCUS       DADMIB010000083        17525 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.083, whole genome shotgun sequence.
ACCESSION   DADMIB010000083 DADMIB010000000
VERSION     DADMIB010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17525)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17525)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17525
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.083"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            162..605
                     /locus_tag="JNZ89_002550"
     CDS             162..605
                     /locus_tag="JNZ89_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004997737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8936387.1"
                     /translation="MDLALVTGQREGDLAAMRWEDIRDGRLYVEQQKTGAKIRISLPT
                     TISRLNLTLTDVLDNLKKINGKNEKLLGGKTARTIAAQFRIARDTSGLKWEGDPPPFH
                     EIRSLSGRLHSAEKGSDFTQALLGHRSSSMTDKYRDGRGREWKDI"
     gene            841..1659
                     /locus_tag="JNZ89_002551"
     CDS             841..1659
                     /locus_tag="JNZ89_002551"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HAY8936388.1"
                     /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG
                     RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHI
                     HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL
                     THDDMPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV
                     VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI"
     gene            complement(1660..2718)
                     /gene="modC"
                     /locus_tag="JNZ89_002552"
     CDS             complement(1660..2718)
                     /gene="modC"
                     /locus_tag="JNZ89_002552"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HAY8936389.1"
                     /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI
                     SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMA
                     KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
                     IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG
                     SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ
                     ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA
                     IKPGLWLYAQIKSVSITA"
     gene            complement(2721..3410)
                     /gene="modB"
                     /locus_tag="JNZ89_002553"
     CDS             complement(2721..3410)
                     /gene="modB"
                     /locus_tag="JNZ89_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HAY8936390.1"
                     /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK
                     ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM
                     SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS
                     LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW
                     LARISRERAGR"
     gene            complement(3410..4183)
                     /gene="modA"
                     /locus_tag="JNZ89_002554"
     CDS             complement(3410..4183)
                     /gene="modA"
                     /locus_tag="JNZ89_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8936391.1"
                     /translation="MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDI
                     ATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQ
                     TLLGNSLVVVAPKASEQKDFIIDSTTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL
                     GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVVSKGVKVVATFPEDSHKKV
                     EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK"
     gene            complement(4349..4498)
                     /locus_tag="JNZ89_002555"
     CDS             complement(4349..4498)
                     /locus_tag="JNZ89_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux pump-associated protein, AcrZ
                     family"
                     /protein_id="HAY8936392.1"
                     /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ
                     PGQNH"
     gene            4627..5415
                     /gene="modE"
                     /locus_tag="JNZ89_002556"
     CDS             4627..5415
                     /gene="modE"
                     /locus_tag="JNZ89_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-dependent transcriptional regulator"
                     /protein_id="HAY8936393.1"
                     /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
                     YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV
                     LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV
                     AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNANNQLPGIISHIERGAEQCE
                     VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC"
     gene            5483..6955
                     /gene="modF"
                     /locus_tag="JNZ89_002557"
     CDS             5483..6955
                     /gene="modF"
                     /locus_tag="JNZ89_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HAY8936394.1"
                     /translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA
                     LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT
                     AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKILLCQALMSEPDLLILD
                     EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGA
                     KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPIL
                     NNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDI
                     KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK
                     RTADAPFHSLSWGQQHLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE
                     GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY"
     gene            7216..8232
                     /gene="galE"
                     /locus_tag="JNZ89_002558"
     CDS             7216..8232
                     /gene="galE"
                     /locus_tag="JNZ89_002558"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308814.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HAY8936395.1"
                     /translation="MRVLLTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI
                     ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN
                     GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
                     TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF
                     GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGIGSSVLDVVNAF
                     SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
                     GYPD"
     gene            8242..9288
                     /gene="galT"
                     /locus_tag="JNZ89_002559"
     CDS             8242..9288
                     /gene="galT"
                     /locus_tag="JNZ89_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HAY8936396.1"
                     /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV
                     LPAHDPDCFLCAGNVRVTGDKNHDYTGTYVFTNDFAALMSDTPDAPESNDPLMRCQSA
                     RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC
                     SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH
                     WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY
                     SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
                     LRAVSDIHFRESGV"
     gene            9292..10440
                     /gene="galK"
                     /locus_tag="JNZ89_002560"
     CDS             9292..10440
                     /gene="galK"
                     /locus_tag="JNZ89_002560"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HAY8936397.1"
                     /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
                     PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLNAPIVAHENYQWANYVRGVVKH
                     LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE
                     AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
                     VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV
                     EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGG
                     GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC"
     gene            10434..11474
                     /gene="galM"
                     /locus_tag="JNZ89_002561"
     CDS             10434..11474
                     /gene="galM"
                     /locus_tag="JNZ89_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HAY8936398.1"
                     /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL
                     SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ
                     LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY
                     RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT
                     SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT
                     TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE
                     YSSLTEYQFIAE"
     gene            11676..12428
                     /gene="gpmA"
                     /locus_tag="JNZ89_002562"
     CDS             11676..12428
                     /gene="gpmA"
                     /locus_tag="JNZ89_002562"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HAY8936399.1"
                     /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
                     LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
                     TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
                     VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF
                     DENFKPLKRYYLGNADEIAAKAAAVANQGKAK"
     gene            complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="JNZ89_002563"
     CDS             complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="JNZ89_002563"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HAY8936400.1"
                     /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH
                     KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV
                     GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
                     AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK
                     KQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT
                     DALLRQLANAVKARRG"
     gene            13954..14334
                     /locus_tag="JNZ89_002564"
     CDS             13954..14334
                     /locus_tag="JNZ89_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936401.1"
                     /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQ
                     VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD
                     INKKVQTGDGINNDVDTKTDGTTQ"
     gene            14448..15389
                     /gene="zitB"
                     /locus_tag="JNZ89_002565"
     CDS             14448..15389
                     /gene="zitB"
                     /locus_tag="JNZ89_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc transporter ZitB"
                     /protein_id="HAY8936402.1"
                     /translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS
                     LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT
                     ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV
                     LGDLLGSVGAIIAALIIIWTGWTPADPILSIVVSLLVLRSAWRLLKDSVNELLEGAPV
                     SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHAHDALLDQIQHYL
                     MDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH"
     gene            complement(15386..16105)
                     /locus_tag="JNZ89_002566"
     CDS             complement(15386..16105)
                     /locus_tag="JNZ89_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HAY8936403.1"
                     /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK
                     ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR
                     WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP
                     FWDSCMMVLSIVAMLLMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA
                     LNGSRMWINSARERGSCALSH"
     gene            complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="JNZ89_002567"
     CDS             complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="JNZ89_002567"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HAY8936404.1"
                     /translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVM
                     VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK
                     TILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAV
                     ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY
                     PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPD
                     KELLEAPTAGEGATCRSCAHCPWMAMNGLQAIAEALEQEGSNHEVHVDERLRERALVP
                     LNRMLDFAATLRG"
     gene            complement(17435..17510)
                     /locus_tag="JNZ89_002568"
     tRNA            complement(17435..17510)
                     /locus_tag="JNZ89_002568"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17475..17477),aa:Lys,seq:ttt)
BASE COUNT         4451 a         4560 c         4377 g         4137 t
ORIGIN      
        1 acatttttaa aacagctata gcttctggtc ttgccgaaga agatccagct tctgcaacca
       61 ggccattcag aactgaagtg aagcgcagtc gactgttaat tgacgagtat ctgttaatca
      121 ggaaaatagc agacgtccag aacgaatggt tcggcctttg catggatctt gcactggtaa
      181 caggacagcg cgaaggagat ctggcggcta tgagatggga ggatataaga gatggcagac
      241 tatacgtgga acaacaaaaa acaggggcaa aaattcgcat ttctctcccc accacgattt
      301 ccagattgaa tttaacactt accgatgtac tggataactt gaaaaaaata aacggtaaaa
      361 acgaaaagtt actcggaggg aagacagcca ggacaatcgc agcacagttc aggattgccc
      421 gagacacatc cggattgaaa tgggaaggtg acccaccgcc atttcatgaa atccgaagtt
      481 tatccggtcg cctgcactca gcagaaaaag gcagtgattt cactcaggcg ctccttggac
      541 atcgttcatc cagcatgacg gataaatacc gtgacggacg agggagggaa tggaaagaca
      601 tttagaatta atttcgaatg atttcgaaac accacttgta attaattgat tataaaggat
      661 taattcctaa gaggcatttg cttcatgaat gctcctttgc atttagcaac tgactgtaac
      721 agctaaaatt agtcgctttt ggcggtgaat gctgaattaa aacgcagaat tttgtccgat
      781 agtggtatcg gtgtaccatt cgcgcagacg aaaattctta accttaatct ggaatacgcc
      841 atgaccacac gcgtgattgc tctcgactta gacggcacct tattgacccc gaaaaagacc
      901 ctgcttcctt catcgataga agccctggcc cgcgctcgcg aagcaggcta tcaattaatc
      961 atcgtcacag gtcgccatca cgtcgctatt catccttttt atcaggcgct ggcgctggat
     1021 acacctgcta tttgctgtaa tggcacctat ttgtatgatt atcatgcaaa aaccgtgctg
     1081 gaagcggacc caatgcccgt taataaagcc ctgcaactca ttgagatgct gaatgaacac
     1141 cacattcacg gtctgatgta tgtggatgat gcaatggtct atgagcaccc gaccgggcat
     1201 gtcattcgca cgtctaactg ggcgcaaacc ctgccgccgg aacagcgtcc gactttcaca
     1261 caagtcgctt ctctggctga aacggcgcaa caagttaacg ccgtatggaa gttcgccctg
     1321 acgcacgatg acatgccgca attgcagcat tttggtaagc atgtcgaaca tgaactggga
     1381 ctggagtgtg aatggtcctg gcacgatcag gttgatattg cacgcggcgg caacagcaaa
     1441 ggtaaacgtt tgacgaaatg ggttgaggcg caaggctggt cgatggaaaa cgtcgtggcg
     1501 ttcggcgata actttaatga tatcagtatg ctggaggccg ctggtacagg cgtggcgatg
     1561 ggcaacgccg atgacgcggt aaaagcgcgc gccaacattg tgattggtga taacaccacc
     1621 gacagcattg cccagttcat ttatagccac ctgatttaat caggcggtta tcgacacact
     1681 tttaatttgc gcgtacagcc acaggcctgg tttgatcgcc agttcatccc tggcccacgg
     1741 gctgatacgc gcccacagcg ttttaccgcc gacttccagc tccacttcca cctgaccgtt
     1801 gtcgtcataa ctattaacaa cttttgcccg caatacgtta cgaatgctgg tttgctgcgg
     1861 cggttgtaaa accagagaaa catcggaagc ctgaatgcgg atacgtagcg cagcttgcag
     1921 cggttcgtcc agcttattga cccacaaatg ctgatcgccc agcgccagcg cggtcatcgc
     1981 gtaatgcgga tgatgctcaa gcaccgtcac tttcagaatg ctactttgtt gctctttcgg
     2041 cagccacgga ttcatcacgc tactacccca gacttcttcc agtgcgccaa aggctttcac
     2101 ctgaccgttt tccagtacca tcactctgtc tgccagatgg aggatctcat ccagcgaatg
     2161 gctgacatac aacatcggga tgttgatttc ccgcgtcaga cgttgcagat aaggcaacag
     2221 ttcgcgttta cgcggaatat ccagtgacgc cagcggttca tccagcaaca gcaattctgg
     2281 tgccgtcagc aaagcccgcc caatcgctac gcgctgtttt tcgcctccgg acaggctgcc
     2341 tggtaaacgg tcaagcaacg gttcaatgcc taaaagcgcc accagcttat cgaactgatc
     2401 gaccatgctt ttcgccatgc cgtagcgcag attgccacgc actttgtaat gcggaaacag
     2461 ccgcgcatcc tgaaaaacat agccaacgcg acgcttttct ggcgtcaggc agataccttt
     2521 ttcggcatca tttagtaccc gaccattgag gacaatcctc cctttttgcg ggcgcgtcag
     2581 tccactgatg gcgttaatca gcgaagtttt tccggcaccg gagacgccaa agatagcagt
     2641 gatgccattg gcgggcagcg tttcattaat agtcaggcaa tggttgccca acgtctggga
     2701 aaaattcagt tccagcatga ttagcgcccc gcccgttcac ggctgattct ggccagccat
     2761 tctgaaatca acagggagat catcgccagc gcaatagaaa taatgcacag tctcgccgcg
     2821 ccactttccc cgccgggggt ctggatcagg gtatacatgg cagagggaat ggttcgcgtt
     2881 tcgccaggaa tgttcgacac aaaggtgatg gttgcaccaa actcaccgag agaacgagca
     2941 aaagccagta ccgtaccaac aataattccc ggtaaggtca gcggtaacgt gatagtaaag
     3001 aaaacgcgcc agcgcccggc acctagtgtt cttgcggcct gttcgagttt gacatcaacc
     3061 ccttccagcg ccagacgaat tgcccgcacc atcagcggaa acgacatgac ggcggcagcg
     3121 agaaccgcgc cgcgccagct aaaggcgaag gtaataccaa accagtcata cagacgttca
     3181 ccgataaatc cgcgccgtcc catcgaaact aataataagt aaccgacgac cacgggcggt
     3241 aacaccagcg gtagatgcag tacgctgtcg agcagagctt tgcccggaaa cgtgcaacgc
     3301 accagtaacc aggcaaaaaa gatcccaaac ggcaggctaa acagcacagc cagggaagaa
     3361 actttcaggc ttaataaaac tgcctgccat tctggatcgg tcagtatcat tacttggttg
     3421 taaatccgta acgtttaaag atttccgctg cctgcggtcc cttcagataa tcataaaatg
     3481 ctttcactgt cgcattgtta tgcccttcca caacagcaac cggatattcc acttttttat
     3541 gtgaatcttc cgggaaggtg gcaaccactt ttaccccttt gctgacaact gcgtcagaac
     3601 cgtaaacaat gcccaacggc gcttcattgc gttcgaccaa cgccagcgcg ccacgaacat
     3661 cttccgccgg agccaatttc ggggagagcg tatcccatgc gcccagtttt tgcagtgctt
     3721 cttttgcata aatgccagca gggacatgtt ccggatcgcc aaccgcgagg cgaccgccat
     3781 tcagcagcga agtccagtta gttgtgctgt cgatgatgaa atctttctgc tcgctggctt
     3841 tcggtgctac aacgaccagg ctattgccga gcagtgtctg gcgcgaagcc gtatcgatcg
     3901 cttttttatc aaccgcataa tccatccatt tctgatcggc agagataaac agatccgcag
     3961 gcgctcccgc ttcaatctga cgggccagag tagatgacga agcgaaagaa gaaaccacat
     4021 ccacgccttt ttctttttta tactgcgtag caatgtcctg cattgcgtta gtcagtgatg
     4081 cggcggcgaa caccgtgatt ttcccttcat ctgccagtgt attgccagca acagcgaaag
     4141 agagtgccgc cccggcaaac aagttcaacc atttacgagc cattggtaac cccttaatgt
     4201 aacgttatat aggtgacaat ataacggcta actcagaatt ttcccagcag ttattgctaa
     4261 cctttgtgag gtagataaga aaaaatatcg gctggaaaag caggaagttg agaaaaagaa
     4321 atgcccgact aagtgggcat tcagggaatc aatgattttg tccgggctgg tcttttttac
     4381 caacaccaga aaagatgttg aatacttcac caagaccgta aatcagaccc aggatgatgg
     4441 ccatcacgac aggtaccatg attacggcga ataccagact ttttaataac tctaacatgg
     4501 tcaactccag atatagtcat gagactattc taaccgctaa gcacagaaaa gcactcccct
     4561 tttgtgcggt cagctttgcg tggcgttcgt tttccgtcac aataagactt ttgccaggac
     4621 attgttatgc aggccgaaat ccttctcacc cttaagctcc aacaaaaatt attcgccgac
     4681 ccgcgccgga tttcgctact aaaacacatt gcgctttccg gttccattag ccagggagcg
     4741 aaagatgccg gtatcagcta taaaagcgcc tgggatgcca ttaacgagat gaatcagtta
     4801 agcgagcata ttctggttga gcgcgcaaca ggcggtaaag gtggcggcgg cgcagtactg
     4861 acccgctatg gtcagcgact gattcagctc tatgacttac tggcgcaaat ccagcaaaaa
     4921 gcctttgatg tgttaagtga cgatgacgcc ctgccgctga acagcctgct ggccgcgatc
     4981 tcacgttttt cactgcaaac cagcgcccgt aaccagtggt tcggtaccat caccgcccgc
     5041 gatcatgatg acgttcaaca gcatgttgat gtcttactgg ctgacggaaa aacacgcctg
     5101 aaagtcgcaa ttaccgcaca aagcggcgca cgtctggggc tggatgaagg caaagaagtg
     5161 ttgatattgc taaaagcgcc gtgggtaggc attactcagg acgaagcggt cgcacaaaac
     5221 gccaacaacc aattaccggg tattattagt catattgagc gcggcgcaga gcagtgcgaa
     5281 gtattaatgg cgctacccga cgggcaaaca ctgtgcgcca cagtgccggt aaatgaagcg
     5341 acttctcttc agcaagggca gaatgtcacg gcctacttta atgccgacag cgtgattatc
     5401 gccacgctgt gctaagcgtg ttgacaattt gttatgaaac acgtatccct gtcagtaatc
     5461 gctgcacaaa atgggatata aaatgtcatc gttgcaaatt ttgcaaggca cgtttcgtct
     5521 tagcgacaca aaaacgctgc aattgcctca gctaacgtta aacgcgggtg atagttgggc
     5581 gtttgtcggt tcgaatggaa gcgggaaatc ggccctggcc cgcgcgctgg cgggggaact
     5641 tccgcttttg aaaggtgaac ggcaaagcca gttttcccac atcactcgtc tctccttcga
     5701 gcaattgcaa aaactcgtca gcgacgaatg gcagcggaat aacaccgata tgctcggccc
     5761 tggcgaagat gacaccggac gcactacggc tgagatcatt caggatgaag taaaggatgc
     5821 accgcgttgc atgcaactgg cgcagcagtt cggtattacc gccctcctcg accgacgctt
     5881 taaatacctt tccactggcg agacgcgaaa aatcctgctg tgtcaggcgc tgatgtcgga
     5941 gcctgacttg ttgattcttg atgagccgtt cgatggcctg gatgttgcct cacgtcagca
     6001 gctggctgag cgactcgcct cgttacatca gtccggtatt actctggtac tggtgctcaa
     6061 tcgcttcgat gagatcccgg agtttgtcca gtttgctggc gtgctggcgg attgcacgtt
     6121 agcggaaact ggcgctaaag aggaactgct ccaacaagca ctcgtcgcgc aactggcaca
     6181 tagtgaacag cttgaaggtg tgcaactgcc ggagccggat gaaccttcag cacgtcacgc
     6241 cttacccgcc aacgaaccgc gcattgtgct gaacaatggc gtggtttctt ataacgatcg
     6301 ccccattctt aataacctta gctggcaggt gaatccaggt gaacactggc aaattgtcgg
     6361 gccaaatggt gcaggaaaat cgacgttatt aagcctggtt actggcgatc atccgcaagg
     6421 ttacagcaac gatttgacgc ttttcggacg acgtcgcggc agcggcgaaa ccatctggga
     6481 tatcaaaaag catatcggtt acgtcagcag tagtttgcat ctggattacc gggtcagcac
     6541 taccgtgcgt aatgtgattc tttctggcta ttttgattcg attggcattt atcaggccgt
     6601 ttcggatcgc cagcaaaaac tggtgcagca gtggctggat attctcggca ttgataaacg
     6661 tacggctgac gctccgttcc atagtctttc ctggggacag cagcatctgg cgctgatcgt
     6721 ccgcgcactg gtgaaacatc cgacgttgct tattctcgat gaaccactac aggggcttga
     6781 tccgctcaat cgccagctta tccgccgttt tgttgatgtg ctgattagcg aaggtgaaac
     6841 gcaattgttg tttgtttcgc accacgctga agatgcgcct gcctgtatta cccatcgcct
     6901 tgagttcgtg ccggacggtg gactctatcg ctatgtgctg acaaaaatat attgagtcgg
     6961 tagtgctgac cttgccggag gcggcctaag cgccctctcc ggccaacggt tcgacgcatg
     7021 caggcatgaa accgcttctt ttttcagata aaaagcgcaa tcattcataa accctctgtt
     7081 ttataatcac ttaatcgcgc ataaaaaacg gctaaattct tgtgtaaacg attccactaa
     7141 tttattccat gtcacacttt tcgcatcttt gttatgctat ggttatttca taccataagc
     7201 ctaatggagc gaattatgag agttctgctt accggtggta gcggttacat tggaagtcat
     7261 acctgcgtgc aattactgca aaacggtcat gatgtcatca ttcttgataa cctctgtaac
     7321 agtaagcgca gcgtactgcc tgttatcgag cgtttaggcg gcaaacatcc aacgtttgtt
     7381 gaaggcgata ttcgtaacga agcgttgatg accgagatcc tgcacgatca cgctatcgac
     7441 accgtgatcc acttcgccgg gctgaaagcc gttggcgaat cggtacaaaa accgctggaa
     7501 tattacgaca acaatgtcaa cggtactctg cgcctgatta gcgccatgcg cgccgctaac
     7561 gtcaaaaact ttatttttag ctcctccgcc accgtttatg gcgatcagcc caaaattcca
     7621 tacgttgaaa gcttcccgac cggcacaccg caaagccctt acggcaaaag caagctgatg
     7681 gtggaacaga tcctcaccga tctgcaaaaa gcccagccgg actggagcat tgccctgctg
     7741 cgctacttca acccggttgg cgcgcatccg tcgggcgata tgggcgaaga tccgcaaggc
     7801 attccgaata acctgatgcc atacatcgcc caggttgctg taggccgtcg cgactcgctg
     7861 gcgatttttg gtaacgatta tccgaccgaa gatggtactg gcgtacgcga ttacatccac
     7921 gtaatggatc tggcggacgg tcacgtcgtg gcgatggaaa aactggcgaa caagccaggc
     7981 gtacacatct acaacctcgg cgctggcata ggcagcagcg tgctggacgt ggttaatgcc
     8041 ttcagcaaag cctgcggcaa accggttaac tatcattttg caccgcgtcg cgagggcgac
     8101 cttccggcct actgggcgga cgccagcaaa gccgaccgtg aactgaactg gcgcgtaacg
     8161 cgcacactcg atgaaatggc gcaggacacc tggcactggc agtcacgcca tccacaggga
     8221 tatcccgatt aaggaacgac catgacgcaa tttaatcccg ttgatcatcc acatcgccgc
     8281 tacaacccgc tcaccgggca atggattctg gtttcaccgc accgcgctaa gcgcccctgg
     8341 cagggggcgc aggaaacgcc agccaaacag gtgttacctg cgcacgatcc agattgcttc
     8401 ctctgcgcag gtaatgtgcg ggtgacaggc gataaaaacc acgattacac cgggacttac
     8461 gttttcacta atgactttgc ggccttgatg tctgacacgc cagatgcgcc agaaagcaac
     8521 gatcctttga tgcgttgcca gagcgcgcgc ggtaccagcc gggtgatctg cttttcaccg
     8581 gatcacagta aaacgttgcc agaactgagc gttgcggcat tgacggaaat cgtcaaaacc
     8641 tggcaggagc aaaccgcaga gctgggaaaa acgtacccgt gggtgcaggt ctttgaaaac
     8701 aaaggtgcgg cgatgggctg ctctaacccg catccgcacg gacagatttg ggcaaatagc
     8761 ttcctgccta acgaagctga gcgcgaagac cgcctgcaaa aagaatattt tgccgaacag
     8821 aaatcaccaa tgctggtgga ttatgttcag cgcgagctgg cagacggtag ccgtaccgtt
     8881 gtcgaaaccg aacactggtt agccgttgtg ccttactggg ctgcctggcc gttcgaaacg
     8941 ctactgctgc ccaaagccca cgttttgcgg atcaccgatt tgaccgacgc ccagcgcagc
     9001 gatttggcgc tggcgttgaa aaagctgacc agtcgttatg acaacctctt ccagtgctcc
     9061 ttcccctact ctatgggctg gcacggcgca ccatttaatg gcgaagagaa tcaacactgg
     9121 cagctgcacg cgcactttta tccgcctctg ctgcgctccg ccaccgtacg taaatttatg
     9181 gttggttatg aaatgctggc agagacccag cgagacctga ccgcagaaca ggcagcagag
     9241 cgtttgcgcg cagtcagcga tatccatttt cgcgaatccg gagtgtaaga aatgagtctg
     9301 aaagaaaaaa cacaatctct gtttgccaac gcatttggct accctgccac tcacaccatt
     9361 caggcgcctg gccgcgtgaa tttgattggt gaacacacgg actacaacga cggtttcgtt
     9421 ctgccctgcg cgattgatta tcaaaccgtg atcagctgtg caccacgcga tgaccgtaaa
     9481 gttcgcgtga tggcagccga ttatgaaaat cagctcgacg agttttccct caatgcgccc
     9541 attgtcgcgc atgaaaacta tcaatgggcg aactacgttc gtggcgtggt gaaacatctg
     9601 caactgcgta acaacagctt cggcggtgtg gacatggtga tcagcggcaa tgtgccgcag
     9661 ggtgccgggt taagttcttc cgcttcactg gaagtcgcgg tcggaaccgt attgcagcag
     9721 ctttatcatc tgccgctgga cggcgcacaa atcgcgctta acggtcagga agcagaaaac
     9781 cagtttgttg gctgtaactg cgggatcatg gatcagctaa tttccgcact cggcaagaaa
     9841 gatcatgcct tgctgattga ctgtcgttca ctggggacca aagcagtttc catgccgaaa
     9901 ggtgtggctg tcgtcatcat caacagtaac ttcaaacgta ccctggttgg cagcgaatac
     9961 aacacccgtc gtgaacagtg cgaaaccggt gcgcgtttct tccagcagcc agccctgcgc
    10021 gatgtcacca ttgaagagtt caacgctgtt gcacatgagc tggacccaat cgtggcgaaa
    10081 cgcgtgcggc atatcctgac tgaaaacgcc cgcaccgttg aagctgccag cgcgctggag
    10141 cagggcgacc tgaaacgtat gggcgagttg atggcggagt ctcatgcctc tatgcgcgat
    10201 gatttcgaaa tcaccgtgcc gcaaattgac actctggtag aaatcgtcaa agctgtgatt
    10261 ggcgacaaag gtggcgtacg catgaccggc ggcggatttg gcggctgtat cgtcgcgttg
    10321 atcccggaag agctggtgcc tgccgtacag caagctgtcg ctgaacaata tgaagcaaaa
    10381 acaggtatta aagagacttt ttacgtttgt aaaccatcac aaggagcagg acagtgctga
    10441 acgaaactcc cgcactggca cccgatggtc agccgtaccg actgttaact ttgcgtaaca
    10501 acgcagggat ggtagtcacg ctgatggact ggggtgcgac tttactttca gcccgtattc
    10561 cgctttccga tggcagcgtc cgcgaggcgc tgctcggctg tgccagcccg gaatgctatc
    10621 aggatcaggc cgcgtttctg ggggcctcta ttggtcgtta tgccaaccgc atcgccaata
    10681 gccgttatac ctttgacggt gaaaccgtga ccctttcgcc aagtcagggc gttaaccagc
    10741 tgcacggcgg cccggaaggg ttcgacaaac gtcgctggca gattgtgaac cagaacgatc
    10801 gtcaggtgct gtttgccctg agttcagatg atggcgatca gggcttcccg ggtaatctcg
    10861 gcgcaacggt gcaatatcgt ctgaccgacg ataaccgtat ctccattact tatcgcgcca
    10921 cagttgataa accttgcccg gtgaatatga ctaatcacgt ctatttcaat cttgacggcg
    10981 agcagtctga cgtgcgcaat cacaagttgc agattctggc ggacgaatat ctgccggttg
    11041 atgaaggcgg cattccgcac gacggcctga aatctgtcgc cggaacgtct tttgatttcc
    11101 gcagcgccaa aatcatcgcc agtgagtttc ttgccgacga cgatcagcgc aaagtgaaag
    11161 gttacgatca cgcattcttg ttacaggcca aaggcgatgg caagaaagtg gcggcgcatg
    11221 tctggtcagc agatgaaaaa ttgcagctga aggtctacac caccgctccg gctctgcaat
    11281 tctactccgg caacttcctc ggcggcacac cgtcgcgggg aacagaacct tacgccgact
    11341 ggcaagggct ggcgttggaa agcgagtttc tgccggacag cccgaaccac cctgaatggc
    11401 cgcaaccgga ctgcttcctg cgtcctggcg aagagtattc cagcctgacg gaatatcagt
    11461 ttattgctga gtaatgttaa gccctcgtca tgagggcttt atctcatatt gctcaaatca
    11521 ccagcaaaca ccgacatatt tgcaactcaa tattcacaac aaccttacac tgcgccacta
    11581 ttttcgctat ggttatgcgt aagcattgct gttgcttcgt cgcggcaata taatgagaat
    11641 tattatcatt aaaagatgat ttgaggagta agtatatggc tgtaactaag ctggttctgg
    11701 ttcgtcatgg cgaaagtcag tggaacaaag aaaaccgttt caccggttgg tacgacgtgg
    11761 atctgtctga gaaaggcgta agcgaagcaa aagcagcagg taagctgctg aaagaggaag
    11821 gttacagctt tgactttgct tacacttctg tgctgaaacg cgctatccat accctgtgga
    11881 atgtgctgga cgaactggat caggcatggc tgcccgttga gaaatcctgg aaactgaacg
    11941 aacgtcacta cggtgcgttg cagggtctga acaaagcgga aactgctgaa aagtatggcg
    12001 acgagcaggt gaaacagtgg cgtcgtggtt ttgcagtgac tccgccggaa ctgactaaag
    12061 atgatgagcg ttatccgggt cacgatccgc gttacgcgaa actgagcgag aaagaactgc
    12121 cgctgacgga aagcctggcg ctgaccattg accgcgtgat cccttactgg aatgaaacta
    12181 ttctaccgcg tatgaagagc ggtgagcgcg taatcatcgc cgcacacggt aactccctgc
    12241 gtgcgctggt gaaatatctt gataacatga gcgaagaaga gattcttgag ctgaatatcc
    12301 cgactggcgt gccgctggtg tatgagttcg acgagaattt caaaccgctg aaacgctatt
    12361 atctgggtaa tgctgacgag atcgcagcga aagcagcggc ggttgcaaac cagggtaaag
    12421 cgaagtaaac gtcattcgtt taaaatgaga aagccgactg caagtgagtc ggcttttttg
    12481 ttgctaacaa tggagcacat tgcctgatgc gacgcttcgc gacttatcag gcctgtggtg
    12541 attcatcgga tacgccactc tgacggcgca tccgacaatt aaaccttacc cgcgacgcgc
    12601 ttttactgca ttcgccagtt gacgtaacag agcatcggta tcttcccagc cgatgcaggc
    12661 atcggtgatg ctcttaccgt aggccagcgg ctccccgctc tcgaggctct gattgccttc
    12721 caccagatgg ctttccacca tcacgccaat aatggccttt tcgccaccgg caatctgctg
    12781 gcaaacgtca gcacaaacat ccatctgctt tttgaattgt ttggacgagt tagcatggct
    12841 gaaatcgatc atcacctgtg ctggcaggcc tgctttgttc agcccttctt tcacttcagc
    12901 aacgtgcttc gcgctgtagt taggctcttt accgccgcgc agaatgatat ggcaatcgcc
    12961 gttaccgctg gtattcacaa tcgccgaatg cccccatttc gttacggaca ggaagcagtg
    13021 cggcgcaccg gcggcattaa tggcatcgat agccacttta atcgtaccgt cggtgccatt
    13081 tttgaagccg actggacaag aaagccctga tgccagttcg cggtgcacct gcgattcggt
    13141 ggtacgtgcg ccaattgcgc cccagctcat caggtcagcg agatattgtg gggtgatcat
    13201 atcgagaaac tcacccgccg ctggcagacc gctgtcgtta atatcaagca gcaatttacg
    13261 ggctatacga agaccgtcgt tgatctggaa gctgttatcc atatgcggat cgttaatcag
    13321 ccctttccag cccaccgtgg tacgcggctt ttcaaaatag acgcgcatta cgatttccag
    13381 ctcatctttc agctcttcac gcagcgccag caagcgagtg gcatactctt tagccgcgac
    13441 aggatcatga attgagcacg ggccaatcac caccaacagg cgatcatcat tacctttcag
    13501 gatcttatgg atcgcttttc gggcatgggc aaccgtattc gcggcatttt cagtagcggg
    13561 gaatttttcc agcaatgcga caggaggaag taactctttg atttctttga tgcgtaaatc
    13621 gtcgttctga taattcatgt ctgttccagt gttgccatac ttatcttagt gaatgcaata
    13681 cttccaatct atatcttccg tcagaatgtg taaacggggt tttacattat gaacggatta
    13741 atcctggaat tagcaagaaa aacgccagat tgtcgcgaaa aacgagatct ctcctacaat
    13801 ttctaactgt aactcctttg tttgttaatt atttcaagat tctctgctgc gtttcataaa
    13861 ctggctgaaa tcttaaacca atgccttata ttcacctgca aatgcactgt tggaagaggt
    13921 tatccgacat aacgaccata acaggagcat cctatgaaaa tgacaaaact ggccacatta
    13981 tttctgactg ccactctaag ccttgccagc ggtgccgcac tggctgccga tagcggagcg
    14041 caaactaata acggccaggc aaacgccgca actgatgcgg gccaggtagc ccctgacgcc
    14101 cgtgaaaatg tcgcgccaaa taacgtcgac aataacgggg taaataccgg ttctggcggc
    14161 acaatgctgc attcggatgg ttcttcaatg aacaatgacg gaatgaccaa agatgaagag
    14221 cacaagaaca ccatgtgcaa agatggtcga tgtccggata tcaataaaaa ggtacaaacc
    14281 ggtgatggca tcaataatga tgtcgatacc aaaaccgacg gtaccacgca gtaaccctgc
    14341 aaaatagcca ataatgggag agcggagtct ctccctttta atttttcact tctaaaagca
    14401 gtatgatgtc ataaagttaa gtgagaataa ttaagggatg actcgtcatg gcgcactcac
    14461 actcacacac gtcctcacac ctgccagaag ataataatgc tcgtcgcttg ttgtatgctt
    14521 tcggcgtgac tgccgggttt atgctggtag aagtcgttgg tggttttctt tctggttctc
    14581 tggcattgct ggccgatgcg ggtcatatgt tgaccgatac tgccgccctg cttttcgccc
    14641 tactcgccgt gcaattttca cgtcgtcctc ccaccattcg ccacactttc ggttggctaa
    14701 gactgaccac gctcgcggcg tttgtgaatg ccatcgccct cgtggtaatt accattttga
    14761 ttgtctggga ggcgatagaa cgcttccgca cgccgcgtcc ggtcgagggc ggcatgatga
    14821 tggcaattgc cgtggctggg ttgctggcaa atatactttc tttctggtta cttcatcacg
    14881 gcagcgaaga gaaaaacctc aacgtacgag cagcggcatt gcatgtgctc ggggacctgt
    14941 tgggttcggt tggggctatt attgccgcgt tgattattat ctggaccggc tggacacctg
    15001 ctgaccccat tctctcgata gtggtgtcgc ttctggttct gcgtagcgcg tggcgactgt
    15061 tgaaagatag cgtgaatgaa ttacttgaag gtgcaccggt atcgctggat atcgctgaac
    15121 tgaagcgtcg tatgtgccgg gaaatcccgg aagtccgcaa tgtgcaccat gtacatgtat
    15181 ggatggtagg tgagaagccg gtgatgacgc tgcatgtgca ggtgatcccg ccacacgctc
    15241 acgatgcctt gttggatcag atccaacact acctgatgga tcactatcag attgagcacg
    15301 ccaccattca gatggaatat caaccttgtc atgggccaga ctgccacctg aatgaagggg
    15361 tgtctggcca ttcacatcat caccattaat gggacagcgc gcatgagcct ctttcacgtg
    15421 cgctgttgat ccacatccga ctgccgttga gcgcaataaa ggtcaggatg atgtactcca
    15481 gagacatggc gtaaacgccc tgaagtgcaa aaataacgac gctaatcacg ttaataatca
    15541 cccacaacag ccagttttcc acatacttac gcgtcatcag aagcattgcc acgatagata
    15601 acaccatcat gcatgaatcc cagaacggga aagcgtccgg ttgcagttca ggcatcacaa
    15661 cctgtaatcc taatgcttgc atgatcatga ctgccacgcg ggtcaaaaat gcaaacaccg
    15721 gattgataaa taccgtcatc agaccaatcg aaacaacgca aaccgccaac cagctgagcg
    15781 ccttcggcaa tggtaaccag cgaattttca actccgcctc gttctgactg gtttgtcgcg
    15841 accacgcata ccaaccgtaa atattcgcgg caaagaaaaa cacctgtaat agcaggctgg
    15901 catacagctg aatctgaaag aaaataatgc caaacaaggt gacgttgatc aggccaaaga
    15961 agtagttgct gatcttctcc agactggcaa ggccaataca cagcaacccg gcgatcgtgc
    16021 ctaccgcttc gatccatgag agatcataac cgcctgctcc tattggtata tgtaccagga
    16081 tattctgcac actaaaaaaa tccatctttc ccccaaagcg taacgttacg ccttattatt
    16141 cgttatccac gtagtgtagc cgcaaaatcc agcatacgat tgagcggcac cagcgccctc
    16201 tctcgcagcc tttcatcaac atgaacctcg tgattgcttc cttcctgttc taatgcctct
    16261 gcgatggcct gaaggccatt catggccatc cacggacaat gcgcgcagct gcggcaggtt
    16321 gcaccctcac ctgcggttgg tgcttccagt aactctttat ctggcaccgc ctgctgcatt
    16381 ttgtagaaaa taccccgatc ggttgccaca ataagcctct gatgtggcaa tgttttcgca
    16441 gcagcgatca gttgactggt ggaaccgacc gcatccgcca tatcgacaat agcttgtggt
    16501 gattctggat gcaccagtat ggcagcatcc gggtattctt cttgcaagcg ggttaacgcc
    16561 tgagtcttaa attcatcatg cacaatacag gcaccctgcc agcatagaat gtctccaccc
    16621 gtctgttttt gcacgtaacg ccccagatgt ttgtcgggtg cccagatgat tttttcaccc
    16681 aaactatcaa gatgatcaat aagttcgacg gcaatgcttg aagttaccac ccaatctgcg
    16741 cgcgctttta ccgcagcaga agtgttggcg tagacgacga cagtacgatc gggatgggca
    16801 tcgcaaaatg cgttaaattc ttcaacaggg cagccgagat ccagtgaaca ttcagcctga
    16861 agtgtcggca tcagaattgt tttttccgga ctgagaattt tggcggtttc tcccataaat
    16921 ctcaccccag cgactaacaa agtagaagcg ggatgctttg caccgaagcg cgccatttcc
    16981 agagaatcag aaatacagcc accggtttct tctgccagtt gttgaatttc gggatcggta
    17041 tagtagtggg caaccatcac cgcattacgt tcttttagca gacgttttat cttctcgcgg
    17101 taatacgctt tttcatcaat gcttaacggc gtcggcttcg gggggaaagg ataaatcgcc
    17161 gtgtctggat caaacattac gctcatctta ccatctcgtt ttacaggctt aacgttaaaa
    17221 ccgacattag cgtaatattc gctgttatcg gtgtaatttg ttttatatgc taaacaagat
    17281 agtcgaatgg tggggaaaag tcactcgaat tacgcctaat tccaccgacg tagagttgct
    17341 tgcacagtaa gctctgacga tgtcatcagg tttacaaagt gaaattgagg atgcctgaat
    17401 agcaaaaaag cgcctttagg gcgctttttt acattggtgg gtcgtgcagg attcgaacct
    17461 gcgaccaatt gattaaaagt caactgctct accaactgag ctaacgaccc atacgggtgt
    17521 tacct
//
LOCUS       DADMIB010000084        17501 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.084, whole genome shotgun sequence.
ACCESSION   DADMIB010000084 DADMIB010000000
VERSION     DADMIB010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17501
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.084"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..744
                     /locus_tag="JNZ89_002569"
     CDS             <1..744
                     /locus_tag="JNZ89_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HAY8936405.1"
                     /translation="SSTDKPAKLKFHQYARATLLSNRGRDHNCDGRRTVEIHKLDLSD
                     WQAFNKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLL
                     QDVESFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYI
                     DQLHTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRD
                     IRSDRMHLTPANHPDLWTQENGEWIYLRN"
     gene            complement(815..1264)
                     /gene="rplI"
                     /locus_tag="JNZ89_002570"
     CDS             complement(815..1264)
                     /gene="rplI"
                     /locus_tag="JNZ89_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HAY8936406.1"
                     /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNI
                     EFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
                     VTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE"
     gene            complement(1306..1533)
                     /gene="rpsR"
                     /locus_tag="JNZ89_002571"
     CDS             complement(1306..1533)
                     /gene="rpsR"
                     /locus_tag="JNZ89_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012986941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HAY8936407.1"
                     /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
     gene            complement(1538..1852)
                     /gene="priB"
                     /locus_tag="JNZ89_002572"
     CDS             complement(1538..1852)
                     /gene="priB"
                     /locus_tag="JNZ89_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HAY8936408.1"
                     /translation="MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
                     QAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS
                     GD"
     gene            complement(1859..2254)
                     /gene="rpsF"
                     /locus_tag="JNZ89_002573"
     CDS             complement(1859..2254)
                     /gene="rpsF"
                     /locus_tag="JNZ89_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HAY8936409.1"
                     /translation="MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPM
                     VKAKDERRERRDDFANETADDAEAGDSEE"
     gene            2581..2856
                     /locus_tag="JNZ89_002574"
     CDS             2581..2856
                     /locus_tag="JNZ89_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY8936410.1"
                     /translation="MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYIN
                     HNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR"
     gene            complement(2931..3482)
                     /locus_tag="JNZ89_002575"
     CDS             complement(2931..3482)
                     /locus_tag="JNZ89_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HAY8936411.1"
                     /translation="MAINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPP
                     RTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHIINPVMVTHIIFSLVFAIGYCIV
                     AEIFPKVKLWQGILAGLIVTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWI
                     IEIMRRDLRNRITHEPDPEVAIR"
     gene            complement(3579..4265)
                     /locus_tag="JNZ89_002576"
     CDS             complement(3579..4265)
                     /locus_tag="JNZ89_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HAY8936412.1"
                     /translation="MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSG
                     VAYETMKADDMVVVDMSGKVVEGKYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAW
                     AQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGDAEPLHTP
                     GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRK
                     HGPNAYYGQK"
     gene            complement(4265..5119)
                     /locus_tag="JNZ89_002577"
     CDS             complement(4265..5119)
                     /locus_tag="JNZ89_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase UlaE"
                     /protein_id="HAY8936413.1"
                     /translation="MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETD
                     ERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA
                     IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
                     LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPG
                     VFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVVKARDWVKARMA
                     KAGMVEAA"
     gene            complement(5129..5779)
                     /gene="ulaD"
                     /locus_tag="JNZ89_002578"
                     /pseudo
     CDS             complement(5129..5779)
                     /gene="ulaD"
                     /locus_tag="JNZ89_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313199.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
     gene            complement(5793..6257)
                     /gene="ulaC"
                     /locus_tag="JNZ89_002579"
     CDS             complement(5793..6257)
                     /gene="ulaC"
                     /locus_tag="JNZ89_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIA"
                     /protein_id="HAY8936414.1"
                     /translation="MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYY
                     QAILDAVEQHGPYFVLAPGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDIL
                     ITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA"
     gene            complement(6267..6572)
                     /gene="ulaB"
                     /locus_tag="JNZ89_002580"
     CDS             complement(6267..6572)
                     /gene="ulaB"
                     /locus_tag="JNZ89_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIB"
                     /protein_id="HAY8936415.1"
                     /translation="MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEY
                     KSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK"
     gene            complement(6588..8036)
                     /gene="ulaA"
                     /locus_tag="JNZ89_002581"
     CDS             complement(6588..8036)
                     /gene="ulaA"
                     /locus_tag="JNZ89_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HAY8936416.1"
                     /translation="MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVT
                     CLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISD
                     TYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGL
                     IAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASW
                     IAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAM
                     AGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAA
                     IYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFG
                     GWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMA
                     VIIVIALAYMFFAGRALRAEEDAEKQLAEQSA"
     gene            8340..9404
                     /gene="ulaG"
                     /locus_tag="JNZ89_002582"
     CDS             8340..9404
                     /gene="ulaG"
                     /locus_tag="JNZ89_002582"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HAY8936417.1"
                     /translation="MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLG
                     CTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVL
                     DPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKER
                     CIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG
                     GSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKV
                     VIPFHHDIWSNFQAAPQEIRVQWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHY
                     PRGFDDCFTIEPDLPFKSFL"
     gene            9512..10267
                     /gene="ulaR"
                     /locus_tag="JNZ89_002583"
     CDS             9512..10267
                     /gene="ulaR"
                     /locus_tag="JNZ89_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HAY8936418.1"
                     /translation="MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLD
                     ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
                     STAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSEN
                     SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLF
                     SRADQIDMLITGKNANPEILQQLEAQGVSILRV"
     gene            complement(10264..11013)
                     /gene="yjfP"
                     /locus_tag="JNZ89_002584"
     CDS             complement(10264..11013)
                     /gene="yjfP"
                     /locus_tag="JNZ89_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY8936419.1"
                     /translation="MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYS
                     YFAVALAQAGLRVIMPDAPDHGSRFSSDEARRLNQFWQILLQSMQEFTTLRAAIAEEN
                     WLLDDRLAVGGASMGAMTALGITARHPTVKCTASMMGSGYFTSLARSLFPPLIPETAA
                     QQNEFNNIIAPLAEWEATNHLEQLGDRPLLLWHGLDDDVVPADESLRLQQALSETGRD
                     KLLTCSWQPGVRHRITPEALDAAVTFFRQHL"
     gene            11195..11524
                     /gene="bsmA"
                     /locus_tag="JNZ89_002585"
     CDS             11195..11524
                     /gene="bsmA"
                     /locus_tag="JNZ89_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313192.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm peroxide resistance protein BsmA"
                     /protein_id="HAY8936420.1"
                     /translation="MVSRKRNSVIYRFASLLLVLMLSACSALQGTPQPAPPVTNHPQE
                     IRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYS
                     QAILYRK"
     gene            11673..11948
                     /gene="yjfN"
                     /locus_tag="JNZ89_002586"
     CDS             11673..11948
                     /gene="yjfN"
                     /locus_tag="JNZ89_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease activator YjfN"
                     /protein_id="HAY8936421.1"
                     /translation="MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVS
                     NISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA"
     gene            complement(12065..13690)
                     /locus_tag="JNZ89_002587"
     CDS             complement(12065..13690)
                     /locus_tag="JNZ89_002587"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418608.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HAY8936422.1"
                     /translation="MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLA
                     SIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHN
                     LAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPL
                     LSDRYDSLLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS
                     VPQSDAHLVLAQTTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDA
                     IGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQ
                     PLMCHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPF
                     VAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLS
                     EAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQ
                     AWCQVMLDTRGGVRLSEQIQNDLLLRATGGVCV"
     gene            complement(13774..14832)
                     /locus_tag="JNZ89_002588"
     CDS             complement(13774..14832)
                     /locus_tag="JNZ89_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HAY8936423.1"
                     /translation="MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQ
                     IEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRM
                     DFAWCGNAPVKLLEYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQ
                     QAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQW
                     VEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKPQIAAGESYVRKPIYSREGGN
                     VTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIRED
                     NTLITKDTSRFVPHYIAG"
     gene            complement(14835..15473)
                     /locus_tag="JNZ89_002589"
     CDS             complement(14835..15473)
                     /locus_tag="JNZ89_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HAY8936424.1"
                     /translation="MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLAL
                     MGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADV
                     PKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
                     PVWLNTSGDYSWRSGSGKKESYSSGGFTTKKASTISRGGYGRSSSARGHWGG"
     gene            complement(15483..15881)
                     /locus_tag="JNZ89_002590"
     CDS             complement(15483..15881)
                     /locus_tag="JNZ89_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HAY8936425.1"
                     /translation="MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNN
                     TAVSLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSE
                     KIINHNTAAGMFMGTAALAGGIFNAACMTW"
     gene            complement(15899..16558)
                     /locus_tag="JNZ89_002591"
     CDS             complement(15899..16558)
                     /locus_tag="JNZ89_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfK family protein"
                     /protein_id="HAY8936426.1"
                     /translation="MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDEL
                     LIALPGEEFTVAAVSRIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYE
                     ESYGISKESHWREAINAKTMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNH
                     AKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHII
                     G"
     gene            complement(16609..17307)
                     /locus_tag="JNZ89_002592"
     CDS             complement(16609..17307)
                     /locus_tag="JNZ89_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HAY8936427.1"
                     /translation="MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDK
                     AGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLEN
                     LITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTV
                     GASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSR
                     AQDVLARLQRQQGE"
     gene            complement(17380..>17501)
                     /locus_tag="JNZ89_002593"
     CDS             complement(17380..>17501)
                     /locus_tag="JNZ89_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HAY8936428.1"
                     /translation="KMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEIT"
BASE COUNT         4467 a         4677 c         4185 g         4172 t
ORIGIN      
        1 tcgtccaccg acaaaccagc aaaattaaaa tttcatcaat acgcacgcgc tacattactg
       61 tcaaatcgtg gaagagatca taattgcgat ggcagacgta ctgttgagat ccacaaacta
      121 gatctctctg actggcaagc attcaataag ttagcaacga agtgtaatgc ttacgatgga
      181 gtaacaatga atggtgataa ttcttttgga tggaaccatg aagctacatt agataatatt
      241 cacgcccaga aatacaataa agcttacgcg ggtgcgaggt taaccgcaga actgaaatat
      301 ttattgcaag atgtcgaatc cttcgaaccc aacagtaaat acacaataca cgaagtggtt
      361 ttgggacctg gttatggtac tccagactat accggccaaa cgataggata cgttgtaacc
      421 cttcctgccc aaatgcctaa ttgctggtca tctgaactac caacaatcga tctttatatc
      481 gaccaacttc acactgttac aggcgtttct aatgccctcg gattcatcat tgctgcattg
      541 ctaaacgcgt attctgattt accccatgat ttgaaaattg gtctgcgttc cttatcaaat
      601 tcagcagcaa tctactcggg tttaggtttc gagcgagtgc cgcaggaccg agacataagg
      661 agtgatcgta tgcatctaac gccagcaaac catcctgact tatggacaca agagaatggt
      721 gaatggatct acttgcgaaa ctaatacctg acgaaaaata gaaagcaaaa cgccgaccaa
      781 tggtcggcgt ttttacgtct cgttgaataa cgaattattc agctactacg tttacgatca
      841 ctttcgcgaa tacttcgctg tgaacctgga agctcacttc gtgttcgcca gtggtacgca
      901 gaacgccgtt cggcagacga acttcgctct tagccacttc aacgccagct gcagttacag
      961 cgtcagcgat gtcgcgagta ccgatggaac cgaacagttt accttcgtcg ccagctttag
     1021 acgcgatggt aacagtttcc agtgcattga ttttctcagc gcgagcatta gcagctgcca
     1081 gaacttcagc cagtttagct tccagttcag cgcgacgtgc ttcgaagaat tcaatgtttt
     1141 tcttggtagc tggaacagct ttaccctgcg gtaccaggaa gttacgagca tagcccgctt
     1201 taacgtttac ctgatcacct aggctaccca ggtttgctac tttatcaagc agaataactt
     1261 gcattacctt atcctctcaa agtcgtatta atggaccgtg accgattact gatggcgatc
     1321 agtgtacggc agcagggaca ggtagcgagc gcgtttgata gcgcgagcca gctgacgctg
     1381 gtattttgca cgggtaccgg tgatacggct tgggacaatc ttaccgcttt cggtgatgta
     1441 gtttttcagc gtagcgatat ctttatagtc gatctcttga acgccttccg cggtgaaacg
     1501 gcagaacttg cgacgacgga aataacgtgc catatggcta gtctccagaa tctatcaatt
     1561 caatctgctc ggcatgcaaa accattttgc tcagtccgtt ctttgccttg tggcatgaaa
     1621 tgaacccctg aacggttatg cgactgccga ccgttatact gtgagtaatg gcctggtttt
     1681 cgtgtccgct aacaataacg ggcatttggc accacgcctg ccggtgaaaa ccggcttcct
     1741 cctgcacaga acgatgctca agcacgaact ggcagtgagg aattcctgat ggactgacct
     1801 ttcgaagggg agtcctgcac acggtgccgg acaacaccag acggttggtc atcagaaatt
     1861 actcttcaga atccccagct tcagcatcat cagcggtttc gtttgcgaaa tcatcgcgac
     1921 gctcacggcg ctcgtctttc gctttaacca tcggagatgc ttcggtaaca gcgtgcttgg
     1981 tacgcataac catgctgcgg ataacggcat cgttgaagcg gaaggtagtt tccagctcat
     2041 cgatcacttc ctgcggagct tcaacgttca tcagaacgta gtgtgctttg tgcagtttgt
     2101 tgatcgggta agccagctga cggcggcccc agtcttccag acggtggatc ttgccttctg
     2161 caccagtgat ggcagcagtg tagcgctcga tcatgcccgg aacctgttcg ctctggtcag
     2221 gatggaccat aaaaacgatt tcgtaatgac gcatcgaatt gctccttacg gattattcag
     2281 cctcctgtct gggtcagccg aatcccgggg aggcaaggaa cgtgttaaag gtcggctgaa
     2341 aaatgacgcg ttatagtact tgtatgcccc actaaactca aggccagccg acaaataaat
     2401 ctcatctttc gctcaaaaga actaactcgc tgatttgaag ttcatcacat tccgtcacag
     2461 tgttttttcg aacaactgca tcagaaatgg tcaccatcaa cttctttatc attgattaaa
     2521 attaaatcag aagatcatca cagaggagag cacacaaagt cagccgtcga ggaggtatct
     2581 atgttcagtc gtgttttagc ccttctggct gtgcttttgc taagtgcaaa tacatgggca
     2641 gccattgaaa ttaataacca ccaggccaga aatatggacg acgtacagag cttaggcgtg
     2701 atttatatca atcataattt cgccactgaa agcgaagcac gtcaggcatt aaatgaagag
     2761 acagatgcgc agggcgcaac gtactaccac gtaattctga tgcgggaacc ggggagtaac
     2821 ggcaatatgc acgccagcgc ggatatttat cgctagcacc aggtataacc aacgaaacat
     2881 tgccatagtt tgctttgccc ccttcgcagg gggctttttt atacggttat tcaccggatt
     2941 gcgacttccg gatctggctc atgagtaatg cgattacgta agtcgcggcg cataatttct
     3001 attatccaga accagaaaat atgccccagg atttcagagg catattcgtc aaaaggcaat
     3061 tgagtgagcg gcggcgttaa attcagcgcc gggcaaaata taccgtggac tgccactgtc
     3121 acaataagcc ctgctaatat cccctgccat aatttcactt tcgggaaaat ttccgcgaca
     3181 atacaatacc ctatcgcaaa aaccagtgag aagatgatat gcgtcaccat caccgggttg
     3241 ataatatgtt ccgagaatgt atacacagtt tgggttgggt cgatacctaa ataatcccgt
     3301 agaaagatat acggcgggtt aaattcatcg cgaccaccgg aaaatgtgcg cggtggcaag
     3361 gggacttccg ctccccattt aacaaatgct gaaataattc ctgaaagtac acccacaagt
     3421 aacgcaacgc catagcggcg acgttgcgga tccgttctga caaacaatcc attgatagcc
     3481 ataaaaacac ctgttgttta tacgattttt taactgaagc ggccccggaa tcagaccaat
     3541 tacatcccgc aggaggtaat aattccgggg cgcactgctt acttctgccc gtaataggcg
     3601 ttaggaccgt gcttacgcat gaagtgttta ttcatgagga agctgtcgat gtgattcagt
     3661 tgtgggttaa tactgcgcgc aatccacgcc attttcgcca cttcttccat caccaccgcg
     3721 ttatgcaccg cgtcgtgggc atctttcccc caggcgaacg gcccgtgctg atacaccaca
     3781 attcccggcg tatgcagcgg ctcggcgtca cccagcgttt cgataatcac tttgccggtg
     3841 ttcagttcat actcgccctg cacctcttct tcgcttaatc cacgcgtaca cgggatgtcg
     3901 ccaaagaagt agtcggcgtg cgtggtgcct aacgccggga tcgccagccc cgcctgcgcc
     3961 catgcggtgg catgagtgga atgggtatgg acaatgccgc cgagcgacgg gtaacgacgg
     4021 tagagttcaa gatgcgtcgc ggtgtcagaa gacgggcgat acttcccttc taccaccttg
     4081 ccgctcatat cgaccaccac catatcgtct gctttcatgg tttcgtaggc aacgccgctg
     4141 ggcttgatca ccaccagccc gcgttcgcgg tcgatagcgc tgacgttgcc ccaggtaaag
     4201 gtcaccagcc catagcgcgg cagatccatg ttggcttcaa acacctgctg ttttagcttt
     4261 tgcattatgc cgcctccacc atgcctgctt tggccatgcg cgctttcacc caatcacgcg
     4321 ctttcaccac ttctgccgcc gggtcttccg ccgtttcgct ccacatctca atcaggtacg
     4381 gcccgcaata gccactctgt ttgagcgttt cgaagcaacg ttcgaaatcc accacacctt
     4441 cgccaaatgg cacgtttttg aagacgcccg gtttggtgtc tttcacatgc accgcgacga
     4501 tatgcccgat tccggcctgc aactccatct gcacatcgtt gtcccacgcc gacaggttgc
     4561 cgatatctgg gtagagctgg aaccacgggt tgttgagata gtgcgcgtaa cccagcgcct
     4621 tgctgatgga gttcatcaac ggataatcca tgatctccat cgccagcgtc acctgcgcgc
     4681 ggctcgccat ctcaacgctc tctttcaggc cgtcacggaa acgacgacgc gtttcgttat
     4741 tggcttcctg atagtaaacg tcatagcccg ccagctggat cacgcgaatg ccaacgtcct
     4801 gggcgaactg gatggcttta cgcataatct ccagcccctg cgcccgcacc gcgtcatctt
     4861 cgctgcccaa cgggaaacga cgatgggcag aaaggcacat ggacggcaca cgcacgccgg
     4921 tttcaacaat cgcattcacc agcgccagac gctgctcgcg gctccagtcg aggcgcgaca
     4981 ggcgctcgtc agtttcatct accgacatct cgacaaaatc gaagcccaac gtttttgcca
     5041 gtcgcaggcg ttccagccag cactccccgg cggggagcgc tttttcatag atgccaagcg
     5101 ggatttgttt ggacaacata tccgctcctt agccccacag ttcggcgatg gaacgtttga
     5161 actgacgcgc ggcttcaacc ggagaagcgg catcacggat gctgcgaccg gcgataaaca
     5221 catgaattgg aatgcctttg aacagcggca gatcttccag cgccaggcca ccggtgacgg
     5281 tgactttgaa gcccatatcg gaaagacgtt tgatcgcagt gatatcggct tcaccccacg
     5341 ccacgccagc ggcctgcgcg tcacggctgc ggtgataaac cacctgctga atacctgcgt
     5401 cgcgccactg ttacgcctgt tcccaggtcc agtaaccggt cagttcgatc tgcacgtcgc
     5461 cgttaaactc ttttgctacg tccagcgcac ctttggcggt gttgatatcc gcacaacaaa
     5521 tcacggtcac ccagtcagcg ttggcttcga agcacatacg agaaagaatt ttgcccgcat
     5581 cggcaatttt ggcgtctgcc agcacgattt tgtgcgggta gagcgctttc agatcgcgaa
     5641 ccgcacgcac gccttcgccc acgcacagaa tggtacccac ttcgataatg tcgacttctt
     5701 cggcaatcag gcgagtggtt tcgtaggcgc tatccatagt ctggttgtcc agcgcgactt
     5761 gcaacatcgg taatgacatc ttcaattcct tcttaagctg ccgcgttggt gcggtcaatg
     5821 agatccagta cttcctgctc ggtacggcag gcacgtaaac ggtcgaaatt ttcttcatct
     5881 tcaaacaggt tgacgatctg catgatgccc acttcctggt gcgtgttggc atcgaccgcc
     5941 gccatggtga tgaggatatc caccgggtcg ttatcttcgt ggttgaactc cagcggcttt
     6001 ttcagcgtca ccagcgcaaa accggttttc ttaacgccct cttccgggcg accgtgcggc
     6061 attgccaggc ctggtgcgag cacaaagtac ggaccgtgct gttcaaccgc atccagaatc
     6121 gcctggtagt aacgcggctc gacaacatcc gccgccacca gcaggtcaac gccgattttt
     6181 actgcgtcct gccatgtctc agcttcagcc tgcaggcgga tggatttatt ctccgccagc
     6241 gaatcacgta atttcatggc gcgtccttac ttcacatcct gcgggaaatg cgctttgatc
     6301 acttccagca gtttcgggcc aaagtcggca ggagagagca tgttgcgcac gccaaccacg
     6361 tatttgttgc cggtcacggt gatttcgccc gcaatgtgcg tagaagcgat gatgatatcc
     6421 gcgccgctca actcgctttt gtattcgcca accgcgcagc tatttaccgt gtggtcaatg
     6481 tttgattggg ttaaaaactg gtccactttc atcttcatga tcatggaact gccttgtccg
     6541 ttgccacaca cagccagaat acgtacggtc ataatcaaaa ctccttatta agcagactgt
     6601 tctgccagtt gtttttctgc atcttcttct gcgcgcagtg cgcggccagc gaagaacata
     6661 taagccagtg caattacaat gatgacggcc ataaaggcga taccgatgga gaagaagccc
     6721 tgcatcatcg gcggtgccag aatcgaccag tccgccatgc ccatccaggc gctcataccg
     6781 gtgagtttca ccgcccagac gcagccaaag atttcaatca tccccatcac cagacatatc
     6841 ttcagcgccg cacgccagcc gccgaagtgg ttagcgaaca cgccgatggt ggcgttggag
     6901 aagaacatcg ggataaagcc gggaataatc aggatcgagg aaccgcaggc gaccaggatg
     6961 ccaaccgcaa tcagctgacc gatggtgccc cacataaagc cccaaaccac ggcgttcggc
     7021 gcgaagctat agatagccgc acagtcaatc gccagaaccg caccagggat caggcgctgg
     7081 gagataccgt taaatgcttc agagagttcc gccacaaaca tgcgcacgcc ctgagtgatg
     7141 atgaagatcg ccaccgcgaa ggagaaacca gtttgcagga tgtacaccgt ccagttcact
     7201 ttgcctgcca tcgcctgcac ggtgtcgata ccgaaggaga gtagaatggc accaaagaag
     7261 atggtcatca caatcgccgt ggagacgatg ttgtcgtgga aaatattcag ccagcctggc
     7321 agtttgaggt cttcaacgct ttcctctttt ttgccgagga acggcgcaac tttataggca
     7381 atccatgatg caaactgttg ctggtgaccg atggagaaac cgcagccgtc cgtcacttcc
     7441 tgagtcggct tgtacatcat attggaggta atgccccagt agagcgaaac cagaatcgcc
     7501 gtgcagataa tggttgtcca catggagtag ccgaaaataa acaacgtaac ggcaatcagc
     7561 cccgcctgct ggaacatgat atgaccagtc agcatgatgg tacgaatacc ggtaatgcga
     7621 cgcagcagca cgtaacagat gttcagcgcc agcgctaaca acaccgcgta acctacccag
     7681 ctataggcat cgcccatgcg gtcgatggtt gccatcatcg acgcgtaagt atcggaaatt
     7741 gcgccgttaa tgccgtagac ttcggacatt ttcgccacca ccggtttgaa ggtgctggtg
     7801 aggatgccgg accctgcctg caacaacatg aaaccaatta tggttttaat cgtgccttta
     7861 ataataacgc tgacactttt gcgcagtagg atgtagccca gacaggtcac aatacccagc
     7921 aacaacgggg cattggtcat gacctggtta aaaaacacgg taaagatgtt gtagagacga
     7981 tctcctgaag aagaggtaac cgggtattcc gcacacccgg aatgttgtgc actcactcta
     8041 attttcaaaa gcaatcacaa caagattatt tatgattaaa tgtgacgcga cccgcaaata
     8101 attccatacg gatagagtgg gatccacaca acgaaacaat tatttattta aatttagtta
     8161 aattcattta gttaatttaa ctatacattc cattaaatct ttccacactc aaaatcaaca
     8221 acaacttccc tggcaaaaag tcaaaaaatg gtcattgcct tcctgaaaaa atagtgtcag
     8281 gattaatcaa aaccaatcac atattgattc gaattgaact atcatgaagg taaatggcga
     8341 tgagtaaagt gaaaagtatc acccgagaat cctggatcct gagcactttc ccggagtggg
     8401 gtagctggct gaatgaagaa attgaacaag agcaggtcgc ccctggcaca tttgcgatgt
     8461 ggtggctagg ctgcaccggg atctggttga aatcagaagg tggcaccaac gtttgcgttg
     8521 atttctggtg cggcactggc aaacaaagtc acggtaaccc gttaatgaaa cagggtcacc
     8581 agatgcagcg catggctggc gtgaaaaaac tgcagccaaa cctacgcacc accccgtttg
     8641 ttcttgatcc gtttgcgatt cgccagatcg acgcggtact ggcgactcac gatcacaacg
     8701 atcatatcga cgttaacgtc gctgctgccg tgatgcagaa ctgtgctgat gacgtaccat
     8761 tcattggacc gaaaacctgc gttgatttgt ggattggctg gggcgtaccg aaagagcgtt
     8821 gcatcgtggt caaaccgggc gatgtggtga aagtgaaaga cattgaaatt catgcgcttg
     8881 atgctttcga ccgtactgca ctgatcaccc tgcctgccga tcaaaaagcg gctggcgtac
     8941 tgccggacgg catggacgat cgcgcggtga actatctgtt caaaacgcct ggcggctccc
     9001 tgtatcacag cggcgactcc cactactcta actattatgc gaagcacggt aacgaacatc
     9061 agatcgacgt ggctttaggt tcatacggcg aaaacccgcg cggtatcacc gacaaaatga
     9121 ccagcgccga tatgctgcgt atgggtgaag ccctgaatgc gaaagtggtt atcccgttcc
     9181 accacgatat ctggtcaaac ttccaggccg ctccgcaaga gatccgcgtg cagtgggaga
     9241 tgaaaaaaga tcgtctgaag tatggcttca agccgtttat ctggcaggtt ggcggcaaat
     9301 ttacctggcc actggataaa gacaacttcg agtaccacta tccgcgcggt ttcgatgatt
     9361 gcttcactat tgaaccggat ctgccgttca aatcattcct gtaatctgtc gtttataccg
     9421 gatagcgtgg agaagttcgc gctatccggc gtagtatttc ctggctattt caaatatcat
     9481 ctaaaaaaat caaattttat cggaatagct catgactgaa gcacaaagac atcaaatcct
     9541 cctggaaatg ctcgcacaat tgggctttgt gaccgttgag aaagtcgttg agcgtctggg
     9601 aatttcgcct gccactgcgc gacgcgatat caataaactt gacgaaagcg gcaaactcaa
     9661 aaaggtgcgc aatggcgcag aagctattac ccaacagcgc ccgcgctgga cgccgatgaa
     9721 tctgcatcag gcgcagaatc acgatgaaaa agtacgtatt gctaaagcgg cctcgcagct
     9781 ggttaatccg ggcgaaagcg tagtcatcaa ctgcggctcc accgcgtttc tgcttgggcg
     9841 ggaaatgtgt ggcaagccag tgcaaatcat cactaattat ctaccgctgg caaattacct
     9901 gatcgatcaa gaacatgaca gcgtgatcat tatgggtgga cagtacaaca aaagtcagtc
     9961 catcacttta agcccgcagg gcagcgaaaa cagtctctat gccgggcact ggatgtttac
    10021 cagcggaaaa gggctgaccg cagaagggtt gtataaaacc gatatgctga cagcaatggc
    10081 agagcagaag atgctgagcg tggtagggaa actggtggta ctggttgata gcagtaagat
    10141 tggcgaacgc gcgggaatgc tttttagccg tgccgatcaa atcgatatgc ttatcaccgg
    10201 caaaaatgct aacccggaaa tcctgcaaca actggaagcg caaggggtca gcattctgcg
    10261 tgtttaaaga tgctggcgga aaaatgtcac ggcagcatct aacgcctcag gcgtaatgcg
    10321 gtgacgcacg cctggctgcc atgaacaggt tagcagttta tcccgtcccg tctcgcttaa
    10381 ggcctgctgc aaacgtagtg attcgtcggc aggcacaacg tcatcgtcga ggccatgcca
    10441 cagcagtaga ggtctgtccc caagttgttc caggtggttt gtcgcttccc actctgccag
    10501 cggcgcgata atgttattga attcattctg ctgtgctgcc gtttcaggta tcagcggtgg
    10561 aaacagtgaa cgggcgagcg atgtaaaata gcccgatccc atcatgctgg cggtacattt
    10621 caccgtgggg tggcgagcgg taattcccag tgccgtcatc gcgcccatcg acgcgccacc
    10681 gactgccaga cggtcatcaa gcagccagtt ttcttcggct attgccgcac gtaaagtagt
    10741 gaattcctgc atactttgta gcaagatttg ccagaattga tttaaccgcc gcgcttcgtc
    10801 gctactaaaa cggctaccgt gatcgggcgc atccggcatg atcacccgca aaccagcctg
    10861 cgccagcgca acggcaaaat agctatacac caggctggat gaagtaaagc cgtgataaaa
    10921 aattacgcac ggtaacgggg tatctttttg cccgacagga taagcatgaa gaacgggaat
    10981 atctgccagc tcgcgtgatt ctatttcaat catctgtctc tcctttttgt ctggtatgac
    11041 atgaagaaat ccttagcaca agtttctgct ggcggtatta gttcataatg ttgagatgtg
    11101 ggttacgctt tcgtcacgtt ttcattcgaa aatcgcgtac caggtaacaa ttcgggaaca
    11161 ttcccccaaa gttaaattaa taaggcacta cactatggtt agcaggaaac gtaatagcgt
    11221 tatttaccgg tttgccagtt tattattggt gttgatgtta agtgcctgta gcgcactgca
    11281 aggtacgcca cagccagcac cgccagtaac gaaccatccg caagagattc gccgcgacca
    11341 gacgcaaggg ttacagcgaa taggtagcgt aagcacgatg gttcggggtt ctccggatga
    11401 cgcattagca gaaatcagag caaaagctgt cgctgcaaaa gctgattatt acgttgtcgt
    11461 catggtggac gaaaccatcg tgacaggaca gtggtattca caagccattt tgtaccgtaa
    11521 ataaatcaga caacttacat agtcagcttt acattgcttt gcgtccctat gcgtttacct
    11581 gtgcacaata aattaccggc tggaagcctg ggcgtttatt accgcgatgg aatgccctgc
    11641 aacatgtggg gaaacgaaaa atggagctga cgatgaaaca attacttgct tcaccctcgc
    11701 tgcaattagt gacttatcct gcgagcgcca cggcacagtc tgcagaattc gccagtgctg
    11761 actgcgtgac gggcctgaat gaaataggtc agatctcagt tagcaatatt tcaggggatc
    11821 cgcaggacgt ggaacgtatc gtggcgttaa aggccgatga acaaggtgcg tcatggtacc
    11881 gcattattac catgtacgaa gaccagcagc ctgataactg gcgcgtacag gcgatactgt
    11941 atgcatgagt gtcatctaca gcaaatgaac aatgccggat tcggcgcgag cgccttgtcc
    12001 ggcctacaat tttcacatat ttcattgagt taatcgaaac cagcgtcgca tcagtcgtat
    12061 acgcttacac acacactccc cccgtcgccc gcagcaataa atcattctgg atctgctctg
    12121 acaaccgtac gccgccgcgc gtatctaaca tcacctgaca ccacgcctgc gccattggcg
    12181 gagaagcata tttcaacatt tgcgcaccgc agcccagcag gaatagctga tgagtaatct
    12241 ctcgccccag ttcttcagct ggcttacgca gctgctgctg taaacgacga accgcgcgat
    12301 caaaatagcg atcctgccct ttcacttcca caaatgcttc cgacaataag tcgtatacgc
    12361 ccgcttgctt attgagaacg cgcaacacat ccaggcacat aatattgccg gaaccttccc
    12421 aaatactgtt taccggcatc tcccggtaaa gccgcggcag ctcgctctcc tcgcaataac
    12481 caatgccgcc cagcacctcc atcgcttcgg ccacaaacgg catacctctt ttgcagatca
    12541 caaattttgc cgcaggcgta aataaacgcg cccacagggc ttctttggca tcggcacgcc
    12601 ggtcccacgc tcgcgcaaga cgaaacagca acgccgtttg cccttcaagc tgaagtgcca
    12661 tgcgacttaa gacatgacac ataaggggct gttggatcaa tggattacca aaaacatggc
    12721 gttgatgtgc atgataaatc gccagcgaaa atgcacggcg catcatggca tggctaccca
    12781 gggcgcaatc aaaacgcgtc atcccaccca ttttcaggat cagacgaatt ccttcccctt
    12841 cctgccccaa caaccagcca atggcatcct gaaactccac ttcgcaactg gcgttagagc
    12901 gattacccag cttatctttc agccgctcga ggcgaatcgc gttgcgttgc ccatcaggca
    12961 aaaagcgcgg cacaaaaaag caggacaaac cgcccgtagt ctgcgccagc accagatgcg
    13021 catcgctttg cggcaccgag aaaaaccatt tatgccccac cagccgataa gagccatctt
    13081 ccagacgctc tgcacgggtg gtgttgctca tgacatcgga accgccctgc ttttccgtca
    13141 ttcccatgcc aatcaacaaa ccgcgttttt gcccacctgg caataagaga gaatcgtagc
    13201 gatcgctcag cagcggcgtg gtccagtcct gaaacggcgt gggtaacatc tgtaacaaca
    13261 atggcgtggc ggcaaaggtc atcgttattg gacataacga cccagcctca acctgcgcat
    13321 gtaacataaa acgcgccgcg cgcgccacaa atgcgccgga gcgagcgtct tcttcccagg
    13381 caagattgtg cacccgattg gtacataacg cctgcatcag caggtgccag gcggggtgaa
    13441 aacgcacatc gtccagacgg cgtccttgcg catcgtagcg caataattca ggcggattca
    13501 cattcgccag ccgccccagt tcaagagatt cagccgttcc taactgctga ccaatactgg
    13561 ctagaaaatc gctatcccag ccagcacctt cacgcgttac cgcttcacag agcgcgccat
    13621 cagacaggta taagttgctg ttatttaatg gtataggttg attaaaaacg gtgtgagttt
    13681 gccagtgcac tgtgtctccc tccatcaatg gcagtcaccc ttagtatggt cactgccatg
    13741 gattcctgac agaaagagat tgctaaaaca ttcttatcca gcaatgtaat gcggaacgaa
    13801 acgtgaggtg tctttggtga tcagcgtgtt atcttcacgg atccccattc cgcacgcttc
    13861 atcatcgaca atccagctac cgatgagtgt gtagctatcg ccaaatcgcg gcagaggttg
    13921 aaacgcctgg tagatcatcg gttcatcggc gtaatcacca tcagcgtggt caacgacgtt
    13981 attctgaccg tcgaaaatgg tgacgtttcc gccttcgcgt gagtagatcg gtttacgcac
    14041 atagctttcg ccagcggcaa tctgcggttt ttcgccctca aaccaggatg caagaaggtt
    14101 aggatgacca ggaaagaagc gccaaagcag cggcattagc cctttattac tcaagatact
    14161 tttccataac ggctccaccc attgctcgcg acgcttgcgc agcagcggac cgttatcgtc
    14221 acgcatcatc cactccagcg gatacagctt aaatgcacgc tggatgacat tatcatcaag
    14281 atcggtcagt acgccgccga cgcccaaacc gagatcttca atgtagataa accgcgactc
    14341 ctgccctgcc tgctgggcgc agtcctgcaa gtacagcacg gtactcctgt cttcatcggt
    14401 gtcctgacag cagcaaaaat aaaacggttc ccgactgtaa agctcactaa agcgcgaaat
    14461 caggcgttcc tgaatggcgt tgtactccag cagcttcacc ggcgcattgc cacaccaggc
    14521 aaaatccatc cggccataca gcgaaggatc gcgtgcgcgc cagctttcgg cgatcacatc
    14581 ccagtacaac ggcgggatcg ccagttgcgt caggatctct tcgtctttaa ccgcgcgatc
    14641 caccacctca aggcacatct gatgcagttc cgcagtcggt ttttcgatct gctcttcaat
    14701 ctggcgcaga gtaaaacggt aagcccgact ctcgtcccaa tagatttcat tgtcgatgat
    14761 atgaaagtcg aaaccgttgt tagcggcgat ctggtccaga tcccgtcgca caggaacgtt
    14821 gtgtctcagc atgattagcc tccccaatgc ccacgggcgc tggaagaacg accatagccg
    14881 ccgcgcgaaa tggttgacgc ttttttggtg gtaaagccgc ctgaagagta agactctttt
    14941 ttgccagaac cggagcgcca ggagtaatca ccggaagtgt tgagccagac agggcgggaa
    15001 gcaaatgagg atccgccgct gttatagacg aacggctcat cgcgatcttt acgaataacc
    15061 cggcttaaca aaaatccaga aacgaccggg atccaactct gttcaacatt gtcgtagtag
    15121 caattttcgt acttagactg acaattctgc tgagtcatat tcttcggaac atcggcataa
    15181 aatgccgctt tggcgttgtt ccagccacgc gcgcaaatgt cggcattatt accgtcatca
    15241 atacaatcct gcactgtcga ataaaacgtt ccgtcgccgt cgttatcgac atcgccacta
    15301 tcgccacaac ctttcaatac aaaaaaagcg gcaccgccca ttagcgccaa cgttaagtat
    15361 ttttgtgcgt agcgattgcg acgcggttca aaaggattat tcggtctacc aatgcgactg
    15421 atcgctccgt gaccaatttt actgttattt cttgatttgc gttttctggc catgatcgtc
    15481 cattaccatg tcatacaagc tgcgttaaaa ataccgccag ccagcgcggc ggttcccata
    15541 aacattcctg ctgcggtatt gtgattaata attttttcgc ttaatgcggg catataaagt
    15601 ctgacaccag caaaaacgag taactgaatc accagtgcaa tcccgcccca ggcgaaatag
    15661 tctggaatac tcaccgcatt gattgccgca ctggataagg ggatcacgta acccaacaat
    15721 gtaccgctga atgccagtga caccgcggta ttattgtttt tgattaattg ccattcgttg
    15781 tgcggtgtaa ttttggagta gataaacaga aaaataatca ccatagccac gccaataaaa
    15841 aaataggcac taaaggcaag aagtgaatcc agtatatgca ttgtaaacgt ccttgtaatt
    15901 aaccaataat atgaagtgat gtcagcggga tatcgacacc caacgcgcgc gaaaataacc
    15961 actctggctc gccgagatcg ttaaaagatt cctcaccatt taacagtaaa tattcgtaag
    16021 tatcttcggt tacttgccgc tggtagccca tggtaaaatt atggacctcc catttggcat
    16081 ggttttgatt ttctactttt tccagcatgt agacgggttc gatatttccc ggttcttcgc
    16141 tgttaaaaaa tcgctgccag cgtttttcct gccagtttaa ggtcattgcc cccatcgttt
    16201 tggcgttgat cgcctcgcgc cagtgactct ctttactgat accgtagctc tcttcataga
    16261 caaagagctt gatatcatca atgtcatcaa tatcttcgcc gccggtggta ttgatttgca
    16321 gaaattcatc gcctgaagtg tagtaacgga aaatctggct accgcctccc agatcgatgc
    16381 ggctgacagc ggctaccgta aattcctcac ccggtagcgc aatcagcaat tcatcttcca
    16441 gcaaacgaaa cgctaacgtg tcgagcgtaa agccactatt gagatgaagt cccagcggac
    16501 cgcgagcgat agcaggctta ttatccttgc caaacagacg ctggaaaaaa ccagacatat
    16561 tttatcctta aaatagttgc cagcctttta gcgaggctgg caaaaaaatt actcgccctg
    16621 ttggcgttgc agtcttgcta atacatcctg ggctctactt ttattgctac cgccaattcc
    16681 ggcttccgcc agcttttcgt caaggtcgcg accgtctgcg actttctcca actgtgcggc
    16741 agcatccagg cgagcctgac gttcggcctg acgcgtttgc aggcgtttta aggattctgc
    16801 cgctgtcgaa acgctggaag atgcgccaac ggtagaggtt gttacagcct gttgtgcacg
    16861 ctgcatggct tcagtggctt taacgacttc catttgctgc tcaaactgag cgatacgctg
    16921 cgctgtcgct gtaactgctt tttccacgcc atcacgggag acttccagat tcgacaacac
    16981 ttgctcttca gcggtaatga gattctcaag gcgcgcgatt tcttcagcaa cttcgttaat
    17041 caacgacgga ttaacgttct tgcttaacgc ttccagcgca cgggcttcca gactggcttt
    17101 gcgctcacgt aaatctttca gcttatcgtg acttaatttc acccgcgcca gcagatcaac
    17161 gcgagatttt ccggctttat cgagttcagc tttagcgtca cgaatatgct gttccagcat
    17221 gcgcacgccc tgggtttctt caatggattc ttccgcctgg gagataaacg atttccccag
    17281 cgtaaataaa ctttttaaaa ttcccataaa tacccgtcct tgtaattagt gtgaatattc
    17341 ttctgtaatt tcagccagat ccaatgcgtt atctaccagc taggttatct caagcaggat
    17401 atcttcaaga gaagatttaa gcgataacgc cccgaaaaca atgtaatact cttcctgttg
    17461 cacgctggag attcctaccg atgacaacgg catcatcttc t
//
LOCUS       DADMIB010000085        17494 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.085, whole genome shotgun sequence.
ACCESSION   DADMIB010000085 DADMIB010000000
VERSION     DADMIB010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17494
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.085"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..642)
                     /locus_tag="JNZ89_002594"
     CDS             complement(<1..642)
                     /locus_tag="JNZ89_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HAY8936429.1"
                     /translation="MSLNFTVIVWLRLSIGGVYELAFCRSSLKSKKYFIILLALAAIA
                     GLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKG
                     TQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAI
                     KDLQSKAPDKNIVIFTHNHCLTYIAKNKRDATFKPDYLDGLVMHVEKGKVYLDG"
     gene            893..2032
                     /gene="arnB"
                     /locus_tag="JNZ89_002595"
     CDS             893..2032
                     /gene="arnB"
                     /locus_tag="JNZ89_002595"
                     /EC_number="2.6.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_024188371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4-deoxy-L-arabinose
                     aminotransferase"
                     /protein_id="HAY8936430.1"
                     /translation="MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQ
                     LTGNQHAIAVSSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDV
                     DRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVG
                     TYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDR
                     QTWGRAPQAEVLTPGYKYNLTDINAAIALTQLAKLEHLNTRRREIAQQYQQALAALPF
                     QPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYR
                     ERFPTLSLPNTEWNSERICSLPLFPDMTTADADRVITALQQLAGQ"
     gene            2036..3004
                     /gene="arnC"
                     /locus_tag="JNZ89_002596"
     CDS             2036..3004
                     /gene="arnC"
                     /locus_tag="JNZ89_002596"
                     /EC_number="2.4.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate
                     4-deoxy-4-formamido-L-arabinose transferase"
                     /protein_id="HAY8936431.1"
                     /translation="MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEIL
                     LIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDAD
                     LQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYG
                     CMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLI
                     NLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAV
                     LFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE"
     gene            3004..4986
                     /gene="arnA"
                     /locus_tag="JNZ89_002597"
     CDS             3004..4986
                     /gene="arnA"
                     /locus_tag="JNZ89_002597"
                     /EC_number="1.1.1.305"
                     /EC_number="2.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-amino-4-deoxy-L-arabinose
                     formyltransferase/UDP-glucuronic acid oxidase ArnA"
                     /protein_id="HAY8936432.1"
                     /translation="MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGS
                     VAHLAAERGIPVYAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFN
                     LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAIT
                     LHHKLCHATRQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLH
                     NMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISIAPLLIACGDGALEI
                     VTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTER
                     LLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI
                     ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSN
                     LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGS
                     SRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG
                     NPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR
                     NAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS"
     gene            4983..5873
                     /locus_tag="JNZ89_002598"
     CDS             4983..5873
                     /locus_tag="JNZ89_002598"
                     /EC_number="3.5.1.n3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HAY8936433.1"
                     /translation="MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDN
                     MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHE
                     VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIE
                     AKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKTEDFNGWLL
                     NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV
                     RGNIAGREGWLGCQQIAGSR"
     gene            5873..7525
                     /gene="arnT"
                     /locus_tag="JNZ89_002599"
     CDS             5873..7525
                     /gene="arnT"
                     /locus_tag="JNZ89_002599"
                     /EC_number="2.4.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A)
                     4-amino-4-deoxy-L-arabinosyltransferase"
                     /protein_id="HAY8936434.1"
                     /translation="MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLA
                     SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT
                     LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKG
                     KSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLT
                     VLPWGLAIAQREPDFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP
                     GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLA
                     AKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLW
                     AFFGWYTLTNVEKTWSFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR
                     YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR
                     QEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK"
     gene            7522..7857
                     /gene="arnE"
                     /locus_tag="JNZ89_002600"
     CDS             7522..7857
                     /gene="arnE"
                     /locus_tag="JNZ89_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnE"
                     /protein_id="HAY8936435.1"
                     /translation="MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLAL
                     ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG
                     GIVILGSTV"
     gene            7857..8243
                     /gene="arnF"
                     /locus_tag="JNZ89_002601"
     CDS             7857..8243
                     /gene="arnF"
                     /locus_tag="JNZ89_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311173.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnF"
                     /protein_id="HAY8936436.1"
                     /translation="MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFG
                     LDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFS
                     LKALLGVACIMSGLMLIFLPTTKQRY"
     gene            complement(8237..8503)
                     /gene="pmrD"
                     /locus_tag="JNZ89_002602"
     CDS             complement(8237..8503)
                     /gene="pmrD"
                     /locus_tag="JNZ89_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416762.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein PmrD"
                     /protein_id="HAY8936437.1"
                     /translation="MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGD
                     LLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCTAAGKTQ"
     gene            complement(8613..9968)
                     /gene="menE"
                     /locus_tag="JNZ89_002603"
     CDS             complement(8613..9968)
                     /gene="menE"
                     /locus_tag="JNZ89_002603"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HAY8936438.1"
                     /translation="MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELATGF
                     AAQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQY
                     ALVLEGENTFPALTSLHIQMVEGTHSALWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL
                     ASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC
                     THASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFAS
                     TVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT
                     RDRGEMHNGKLTIVGRLDNLLFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGH
                     RPVAVVEYDQQTVDLGEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ
                     Q"
     gene            complement(9965..10927)
                     /gene="menC"
                     /locus_tag="JNZ89_002604"
     CDS             complement(9965..10927)
                     /gene="menC"
                     /locus_tag="JNZ89_002604"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HAY8936439.1"
                     /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE
                     ISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELLQMPSVAFGVSCALAELADTLPQAA
                     NYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
                     DANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
                     PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALRLTAVISSSIESSLGLTQLAR
                     IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL"
     gene            complement(10927..11784)
                     /gene="menB"
                     /locus_tag="JNZ89_002605"
     CDS             complement(10927..11784)
                     /gene="menB"
                     /locus_tag="JNZ89_002605"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HAY8936440.1"
                     /translation="MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV
                     RNAFRPLTVKEMIQALADARYDDNVGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG
                     VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG
                     SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
                     REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
                     DFSKFKRNP"
     gene            complement(11799..12557)
                     /gene="menH"
                     /locus_tag="JNZ89_002606"
     CDS             complement(11799..12557)
                     /gene="menH"
                     /locus_tag="JNZ89_002606"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HAY8936441.1"
                     /translation="MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY
                     VDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAG
                     LCGVIVEGGHPGLQNAEQRAERQRSDRQWAQRFRTEPLTAVFADWYQQPVFASLNDDQ
                     RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA
                     ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF"
     gene            complement(12554..14224)
                     /gene="menD"
                     /locus_tag="JNZ89_002607"
     CDS             complement(12554..14224)
                     /gene="menD"
                     /locus_tag="JNZ89_002607"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HAY8936442.1"
                     /translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN
                     SAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
                     LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH
                     AGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPSLESEKQRDWFFWR
                     QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL
                     QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL
                     ELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSL
                     VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN
                     ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY
                     HRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL"
     gene            complement(14313..15608)
                     /gene="menF"
                     /locus_tag="JNZ89_002608"
     CDS             complement(14313..15608)
                     /gene="menF"
                     /locus_tag="JNZ89_002608"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HAY8936443.1"
                     /translation="MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWL
                     ASQQTYPQFYWQQRNGDEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDP
                     SQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTT
                     TREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLN
                     LNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANHPDDKQAQQLEEWLM
                     ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI
                     CLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKIS
                     GNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME"
     gene            complement(15687..15992)
                     /gene="elaB"
                     /locus_tag="JNZ89_002609"
     CDS             complement(15687..15992)
                     /gene="elaB"
                     /locus_tag="JNZ89_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein ElaB"
                     /protein_id="HAY8936444.1"
                     /translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAE
                     KALDDVKKRVSQVSDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
     gene            complement(16047..16508)
                     /locus_tag="JNZ89_002610"
     CDS             complement(16047..16508)
                     /locus_tag="JNZ89_002610"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8936445.1"
                     /translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL
                     TGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLDT
                     CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA"
     gene            16573..17490
                     /gene="rbn"
                     /locus_tag="JNZ89_002611"
     CDS             16573..17490
                     /gene="rbn"
                     /locus_tag="JNZ89_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease BN"
                     /protein_id="HAY8936446.1"
                     /translation="MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ
                     HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVE
                     TALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALN
                     AQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDA
                     ALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD
                     DKGCQHLLRECRSIFPATELANDFTVFNV"
BASE COUNT         4113 a         4698 c         4438 g         4245 t
ORIGIN      
        1 cccatccaga taaactttgc ctttttccac atgcatgact aaaccatcca gataatcagg
       61 tttaaatgtc gcatcacgct tatttttagc aatatatgtc aggcaatgat tatgggtgaa
      121 aataacgata tttttatcag gcgctttgct ttgtaagtcc ttaattgcac tataaatctc
      181 attaccgcac tgaagaagtc gtttatctac cgtcagcttt ttacccgcgg aaaaccaggt
      241 cgccgactga atggtccgga cggtattact ggaataaaga tcgaaatcag ggatgtcagc
      301 gctaaaagcg ttgcccagtt cacgggcatc ctgggtacct ttaaccgtaa tacctgtttt
      361 atctgacaag cattgattgg ttgaacgatc gcaacgttca gcatggcgaa acaaaacgac
      421 aaccgggtgc tgctgtgcca gtctggccaa tgttttattg tcgatacgtg gcaaaccatt
      481 gctactccag gcggcatgag tacccagtcc ggcaattgca gcgagcgcca gtaaaatgat
      541 gaaatatttt tttgacttca atgatgagcg gcaaaaagct aactcgtaaa ctccacctat
      601 agacaagcgc aaccagacaa ttaccgtgaa attgagcgac atttctggtg ataattagca
      661 gttggtgtaa tattaaaaat cctacgatgt cggcaaaatg cctcaaaatt ttgccaaatg
      721 caaagcctaa ataagaaaaa atataaaaat ttcaatattt acgtctaata ttagtttctt
      781 aaggttaagt taatattcta tccttaaaat ttcgttccaa atggcaaaat atacacaaca
      841 ctctttatag caaatataag tggacaggta ttcaatggcg gaaggaaaag caatgtcaga
      901 atttttgcct ttttcgcgac cagcaatggg cgtggaggaa ctcgctgcag ttaaagaagt
      961 tctcgaatcc ggttggatca caaccggtcc gaagaatcag gcgcttgagc aagccttttg
     1021 ccagttgacg ggaaatcagc atgccatcgc ggtcagttca gccaccgccg gaatgcatat
     1081 cacgctaatg gcgttggaaa ttggcaaggg cgatgaagtg attacgcctt ccctgacctg
     1141 ggtttcaacc ctcaatatga tttccttgtt gggtgcaacg ccggtaatgg tggatgtcga
     1201 ccgcgatacg ctgatggtca cgcctgaagc gatcgagtca gccattacgc cacgcactaa
     1261 agccatcatt ccggtgcatt atgccggtgc gccagcagat attgacgcca ttcgcgccat
     1321 tggcgaacgt tacggcatcg cagttatcga agatgctgcc catgccgtcg gtacgtatta
     1381 caaagggcga catattggcg caaaaggtac cgctattttt tcatttcatg ccattaaaaa
     1441 tattacctgt gcggaaggtg gcctgattgt aactgataat gaaaaccttg cccgccagct
     1501 acggatgctg aaatttcacg gcctgggtgt cgatgcctac gacagacaaa cctggggccg
     1561 agcaccgcag gctgaagtct taacaccggg ctataagtac aatctgaccg atattaacgc
     1621 cgcaattgcc ctgacacagt tagcaaaatt agagcacctc aacacccgtc ggcgcgaaat
     1681 tgcccagcaa tatcagcaag cactggcagc tctccccttt cagccattaa gccttcccgc
     1741 ctggccgcac gttcacgcct ggcatctgtt tattattcgt gtcgatgaac aacgttgtgg
     1801 tatcagtcgc gatgcgttga tggaagcgtt aaaagaaaga ggcattggta ccgggttaca
     1861 tttccgcgcc gctcacacac aaaaatatta tcgcgagcgt tttcccacgc tgtcgttacc
     1921 gaataccgaa tggaatagcg aacgcatctg ttctttgccg ctgttcccgg atatgactac
     1981 cgccgatgcc gaccgtgtca tcacagccct tcagcagctc gcaggacaat aagccatgtt
     2041 tgaaatccac cctgttaaga aagtctcggt ggttattccc gtttataacg agcaggaaag
     2101 cttaccggaa ttaatcaggc gcaccaccac agcctgtgaa tcgttgggga aagagtatga
     2161 gatcctgctg attgatgacg gcagtagcga taattccgcg catatgctgg tcgaagcctc
     2221 acaagcggag aacagccata ttgtgtctat tttgcttaac cgcaattacg ggcaacattc
     2281 agcgattatg gcgggattca gtcacgttac tggcgactta attattaccc ttgatgccga
     2341 tctccagaat ccgccagaag aaatcccccg cctagtggca aaagccgatg aaggttacga
     2401 cgtggtaggg actgtacgcc agaaccgcca ggacagctgg tttcgtaaaa cagcttcgaa
     2461 gatgattaac cggcttattc agcgcaccac cggcaaagcg atgggtgact acggttgtat
     2521 gctgcgcgcc tatcgccgtc atattgtcga tgcgatgttg cactgccatg aacgtagcac
     2581 ctttatcccg attctggcga atatcttcgc ccgccgtgcc attgaaattc cagtacatca
     2641 tgccgagcgt gagtttggtg aatccaaata cagttttatg cgcctgatta atttgatgta
     2701 cgacctggtg acctgcctta ccacaacgcc gctacgtatg ctgagtctgc tcggcagcat
     2761 tattgcgatt ggaggtttta gcattgcggt gctgctggtg attttacgcc tgaccttcgg
     2821 accacaatgg gcggcagaag gcgtctttat gctatttgcc gtgctgttta cttttattgg
     2881 cgctcagttt atcggcatgg gattactcgg tgaatatatc ggcaggatct acaccgatgt
     2941 ccgcgcccgc ccccgctatt ttgttcagca agttatccgt ccatccagca aggaaaatga
     3001 ataatgaaaa ccgtcgtttt tgcctaccac gatatgggat gcctcggtat tgaagctctg
     3061 ctggctgccg gttacgaaat tagcgccatt tttacccata ccgataatcc cggtgaaaaa
     3121 gccttttatg gttcggtggc tcatctggcg gcggaaagag gcattccggt ttatgcgccg
     3181 gataacgtta atcatccgct gtgggtggaa cgcattgccc aactgtcacc agaggtgatt
     3241 ttctcttttt attatcgcca tcttatttgc gacgagattt tgcagctcgc tcccgcaggt
     3301 gcatttaatc tgcacggttc gctgttacca aaatatcgtg gtcgcgcgcc gctgaactgg
     3361 gtgctggtga acggtgaaac ggaaacgggc gttacattgc accgaatggt aaaacgtgcc
     3421 gatgctgggg ccattgtggc gcaactgcgc gttgccattg cgccagacga tatcgctatt
     3481 acgctgcatc ataaattgtg ccatgccacg cgccagctac tggaacagac attacccgcc
     3541 attaaacacg gtaatattct ggaaatcgcc cagcgcgaaa acgaagccac ctgttttggt
     3601 cgcagaacgc cggatgacag tttccttgaa tggcataaac cggcatccgt actgcacaac
     3661 atggtacgtg ccgttgccga tccgtggccg ggtgccttca gctatgttgg caatcagaaa
     3721 ttcaccgtct ggtcgtcgcg tgttcatcct catgccagca aagcacagcc ggggagcgtg
     3781 atttctattg caccgctgtt gattgcctgt ggcgatggcg cgctggaaat cgtcaccgga
     3841 caggcgggcg acggcattac tatgcagggc tcgcaattag cgcagacgct gggcctggtg
     3901 caaggttcac gcttgaatag ccagcctgcc tgcaccgccc gacgccgtac ccgggtactc
     3961 atcctcgggg tgaatggctt tattggcaac catctgacag aacgcctgct gcgcgaagat
     4021 cattatgaag tttacggtct ggatattggc agcgatgcga taagccgttt tctgaatcat
     4081 ccgcattttc actttgttga aggcgatatc agtattcatt ccgaatggat tgagtatcat
     4141 gtcaaaaaat gtgatgtcgt cttgccgctg gtggcgatag ccacgccgat tgaatatacc
     4201 cgcaacccgc tgcgcgtatt tgaactcgat tttgaagaga atctgcgcat tatccgctac
     4261 tgcgtgaagt accgtaagcg aatcatcttc ccgtcaactt cagaagttta tgggatgtgt
     4321 agcgataaat acttcgatga ggaccattct aatttaatcg tcggcccggt gaataaacca
     4381 cgctggattt attcggtatc aaaacaatta cttgatcggg tgatctgggc ctatggcgaa
     4441 aaagagggtt tacagttcac cctcttccgc ccgtttaact ggatgggacc acgactggat
     4501 aaccttaatg cggcacgaat cggcagctcc cgcgctatta cgcaactcat tctcaatctg
     4561 gtagaaggtt caccgattaa gctgattgat ggcggaaaac aaaaacgctg ctttactgat
     4621 attcgcgatg gtatcgaggc gttataccgc attatcgaaa atgcgggaaa tcgctgcgac
     4681 ggtgaaatta tcaacattgg caatcctgag aacgaagcga gcattgagga actgggcgag
     4741 atgctgctgg cgagcttcga aaaacatccg ctgcgccatc atttcccacc gtttgcgggc
     4801 tttcgcgttg tcgaaagtag cagctactac ggcaaaggat atcaggacgt agagcatcgt
     4861 aaaccgagca tccgcaatgc ccaccgctgc ctggactggg agccgaaaat tgatatgcag
     4921 gaaaccatcg acgaaacgct ggatttcttc ctgcgcaccg ttgatcttac ggataaacca
     4981 tcatgaccaa agtaggctta cgcattgatg tcgatacctt tcgtggcacc cgtgaaggcg
     5041 tgccgcgtct gctggaaatc ttgagtaagc ataatattca ggccagcatt tttttcagcg
     5101 tcggcccgga caatatgggc cgccatctct ggcgactggt gaagccacag tttttgtgga
     5161 agatgctgcg ctcaaacgcg gcatcgcttt atggctggga tattttactg gcaggtacgg
     5221 cctggccagg taaagagatt ggtcatgcca atgccgatat cattcgtgaa gcggctaaac
     5281 atcacgaagt cggcctgcac gcctgggatc accatgcctg gcaagcccgt agcggtaact
     5341 gggatcggca aacaatgatc gacgatattg cacgcggtct tcgcactctg gaagagatta
     5401 tcggtcaacc ggtaacctgt tctgccgctg cgggctggcg tgccgaccag aaggtgatcg
     5461 aagcaaaaga agcgttccat ttgcgctaca acagcgattg tcgtggggcc atgccgttcc
     5521 gtccattgct cgaatcagga aaccctggca ctgcgcaaat tccggtgacc ttacccacct
     5581 gggatgaagt gattggtcgg gatgtgaaaa cagaagattt taacggttgg ttactcaacc
     5641 gcatcctgcg agataaaggc acgccggttt ataccattca tgcagaagtt gaaggctgcg
     5701 cttatcagca taattttgtg gatctcctca aacgcgcagc tcaggaaggc gtgacatttt
     5761 gccctttaag cgaactgtta tcagagacgt tgccgctcgg acaagttgtt cgcggaaata
     5821 ttgccggacg tgaaggctgg ctgggttgcc aacaaattgc gggtagtcgc tgatgaaatc
     5881 ggtacgttac cttatcggcc tcttcgcgtt tattgcctgc tattacctgt taccgatcag
     5941 cacgcgtctg ctctggcaac ccgatgaaac gcgttatgcg gaaatcagtc gagaaatgct
     6001 ggcatccggc gactggattg tgccccatct gttagggcta cgttatttcg aaaaacccat
     6061 tgccggatac tggattaaca gcattgggca atggctattt ggcgcgaata actttggtgt
     6121 gcgggcaggc gttatctttg cgaccctgtt aactgccgcg ctggtgacct ggtttactct
     6181 gcgcttatgg cgcgataaac gtctggctct actcgccaca gtaatttatc tctcattgtt
     6241 tattgtctat gccatcggca cttatgccgt gctcgatccg tttattgcat tctggctggt
     6301 ggcgggaatg tgcagcttct ggctggcaat gcaggcacag acgtggaaag gcaaaagcgc
     6361 aggattttta ctgctgggaa tcacctgcgg catgggggtg atgaccaaag gttttctcgc
     6421 ccttgccgtg ccggtattaa gcgtgctgcc atgggtagcg acgcaaaaac gctggaaaga
     6481 tctctttatt tacggctggc tggcggttat cagttgcgta ctgacggttc tcccttgggg
     6541 actggcgata gcgcagcggg agcctgactt ctggcactat tttttctggg ttgagcatat
     6601 tcaacgcttt gcactggatg atgcccaaca tagagctccg ttctggtact acgtgccggt
     6661 catcattgcc ggtagcctgc cgtggctggg attactcccc ggtgcactgt acacaggctg
     6721 gaaaaaccgc aagcattccg caaccgtcta tttgttgagc tggacgataa tgccgctgct
     6781 gtttttctcc gtcgctaaag gtaaattgcc cacctatatt ctttcctgct ttgcatctct
     6841 ggcaatgctg atggcgcatt acgctttgct ggcagcaaaa aataatcctc tggcgctgcg
     6901 gattaatggc tggattaaca tcgcttttgg cgtcactggc attattgcca catttgtggt
     6961 ctccccgtgg ggaccaatga acacgccggt gtggcaaacc ttcgagagct ataaagtctt
     7021 ttgtgcctgg tcgatttttt cgctatgggc atttttcggc tggtacacct taacaaacgt
     7081 cgaaaagacc tggtctttcg ccgcgctttg cccgctgggg ctggcgttgc tggtaggatt
     7141 ttcaattcct gacagagtca tggaaggaaa acatccgcaa ttttttgtcg agatgacaca
     7201 agaatcactt caaccaagcc gctatattct tactgatagc gtcggtgttg ccgcaggtct
     7261 ggcatggagc ctgcaacgcg atgacatcat catgtatcgc cagacaggtg agttgaaata
     7321 cggccttaat tatccggatg cgaaagggag atttgtcagc ggtgatgagt tcgcaaactg
     7381 gcttaatcaa catcgtcagg aggggattat tacactcgtg ctttcggttg accgcgatga
     7441 agatatcaac agtctcgcca ttccgcccgc agatgccatc gatcgtcagg agcgtctggt
     7501 gctgattcag tatcgtccca aatgatctgg ctaacattag tctttgccag cttgcttagc
     7561 gttgccgggc agttgtgtca gaaacaggca acctgctttg tggcgataaa caaacggcgc
     7621 aaacatatcg tgctgtggct gggactggcg ctggcttgtc ttggtcttgc catggtgctc
     7681 tggctgctgg tcttgcagaa cgtaccggta ggcattgcct acccgatgtt aagtctgaat
     7741 tttgtctggg tgacgctggc tgcagtaaaa ctgtggcacg aaccggtatc gccgcgtcac
     7801 tggtgtgggg tggcgttcat tattggtggc attgtgatcc tcgggagtac ggtgtaatgg
     7861 gcctgatatg gggattattc agcgtcatta ttgcctcagt tgcgcaatta agcctgggtt
     7921 ttgcggcaag tcatctgccg ccgatgacgc acttatggga ttttatcgcg gctctgttag
     7981 cttttggcct ggatgcccgg atactgttac tcgggctgct gggttatctg ctttccgttt
     8041 tttgttggta taaaacgcta cataaacttg cgctaagcaa agcctatgcc ttgctcagta
     8101 tgagttatgt gctggtatgg attgcttcaa tggtacttcc cggctgggaa gggacttttt
     8161 cgctgaaagc actactggga gtagcctgta ttatgagcgg gttgatgctg attttcctgc
     8221 ccacgacaaa acaacgttac tgagttttcc ctgccgctgt acactgccgt tcccactcat
     8281 cggggctata actgcttgcc gagaggactt tcaccgtatg cagcttttca cgattaatac
     8341 aataaagcgc attctgcaaa ggcgagagta aatcccccac tttcacggcg aagtcactct
     8401 tcacttcggc gatcattttt atcgcgccgc cagcatcgca gagcataagt acatgtctgt
     8461 tatcttgttt attgcagcac gattttttga ccagccattc cattgcatta tcctgtttgc
     8521 taagagtttt cacatcaatt tacagattaa cagataaact ctttatcaac ggcaatggaa
     8581 tggcagaaat gagaagtgaa acggagggtt aattattgct gacgttgcac ccactctttt
     8641 agcgcctgac gtgaaatttt aataccgccg tttttcagct ccggcggtaa agtcagccag
     8701 cgcaccggtt gttgaaaacg agccagctta tctttcaccc attcgccaag atcaacggtt
     8761 tgctggtcat actccaccac cgctaccggc cgatgaccaa actccttgtc ggcaacggga
     8821 acgataaaca cctgcaaaac cgcaggatgt gcagcaataa cacgctcgac ttcttccggc
     8881 tgaataccct caccgccact gaataacaga ttgtctaaac gtccgacaat ggtcagcttg
     8941 ccattatgca tctcaccgcg atcgcgcgta gcgtaccagc cttcgtcatt aaccagtgaa
     9001 accagttgcc cgttacgcca gtaaccttct gccatactgg cagcccgcag ccacacttca
     9061 ttattaacga ttttcacttc ccgacccggc agcggcgaac caacgtctgc caggccgtcg
     9121 gcttctttcg cacataccgt ggaggcaaac tcggtcagac catagccgca aaagcaacga
     9181 atcccctgct cgcgcgcctg ttccgtcaac tcgaccggga tagccgcgcc gccaagtaac
     9241 accgctttca gggaaacgga actgcggtta accagcaaac gccagagttg tgttggcacc
     9301 agtgaagcgt gagtacagcc tgccagcatt tgctccaatg gctgtttatc acgcaccgtc
     9361 atccgcgcac cagcgtataa ccagcgccac ataattccct gaccggagac gtgaaacagc
     9421 ggtaaagaga gcaaccagtc atcgtgatcg ccaaacggaa tcagcgataa cacaccttgc
     9481 gcactggcaa gatgggcctg ataagtatgg acagcggctt tcggtaaacc ggtggagccg
     9541 gaggtcaatg tcattgaaca aagacgtgtt ggttgccaca gagctgaatg tgtgccttca
     9601 accatctgaa tatgcagtga agttaacgcc gggaaagtat tttctccttc cagcaccagc
     9661 gcatattgca gtgtaagatt tggcagtaat tcctcaagca acggttgcgg aagctgtgga
     9721 tttacgggca gcacccgcgc cccgcattgc agtaacgcca gccaggcgag cagcgtttgc
     9781 ggcgtattcc acgcccgcaa catcacgccg ctgccctcaa ccacaccctg cgccgcaaag
     9841 cccgtagcta actcatcgac gcgagcacaa agctcgcgcc agttgagttg ctcgtcatta
     9901 agacgtaagg cgatggcttc tccccgcact tgccgccagt gacgccacgg ccagtcagag
     9961 aagatcataa caaccgctcc agtgcatcaa cttccacgac aggcagcgtg ctacccggcc
    10021 agcgacgtac ctgctgcgcc tgcatcagat ccagcgtgtc cagccctgga atggtgtccg
    10081 gcgttaacca ggcggcaatc cgcgccagtt gcgttaagcc taagctcgac tcaatagaag
    10141 aactgatcac cgccgtcagc ctcaacgcgt gcgccgcctg tacctgctcg cgtacttttt
    10201 ccagactgcc cgtgagcgtg ggtttgataa ctaccgcgcg cacgccctct tcagccacaa
    10261 aggcaaaatc cggctcgcgc aggctttcat cccaggcaat ggcaatgccg gtttcacggg
    10321 caaacgctcg cgaatcatcg cgggttttgc acggctcttc gagaaacgcg atgcggtggc
    10381 gataatccgg gttaacatat ttggcaaact gctgaccttt cagcggtgtc caggcgcgat
    10441 ttgcgtcaag acgcaaatgc agatccggaa ttgcctccag caacagatta accaccatgc
    10501 cgtcgcgcac ggcttcgtac aatcccactt tgaccttcgc cactttctcg cctggcatat
    10561 cagcaagttt gaggatcaga tcgtcaggat cgccattaca cagtggtgcc gcacggtaat
    10621 tggccgcctg cgggagcgta tctgccagct ccgccaatgc acagcttacg ccaaaggcaa
    10681 cggaaggcat ctgcagtagc tcgcaatcgc ctgccagcca gttatttacc caggcaagca
    10741 gcacgctttg cgcctcttcc caggtttcct ggctgaagcc cggcagtggg gagatctccc
    10801 cccacccttc gcgctcgccc tcacgcaggc aaacgtacag cccgtcgcgg gtttttaacc
    10861 gcctgtcgcg cagaaccacc cccgcgtcca tggggatctg ccagcggtat acctgcgcgc
    10921 tacgcattac ggattccgtt taaatttgct gaaatcaggc tgacgtttct ggttgaaagc
    10981 gttgcgacct tcctgacctt cttccgtcat gtagaacagc atggtggcgt tgcccgccag
    11041 ctcctgcagc cccgcctgcc cgtcacagtc ggcgttcagt gcagctttca ggcagcgcag
    11101 cgccatcgga ctgttttgca gcatttcgcg gcaccagcga acggtctctt tttccagatc
    11161 cgccagcggt accacggtgt tgacaaggcc catatccagc gcctgtttcg cgtcgtactg
    11221 acggcacagg aaccagattt cccgcgcttt tttctgtccg acgatgcgag ccatgtagga
    11281 agcgccccag ccgccgtcga aggaaccgac tttcgggcca gtctgaccga agatggcatt
    11341 atctgccgcg atagtcaggt cgcacatcat gtgcagaacg tgaccgccgc cgatggagta
    11401 gccagccacc atcgcgacaa ccggtttcgg acaggtacgg atctgacgct ggaagtccag
    11461 cacgttcagg tgatgtacgc cggaatcatc tttatagccg ccgtaatcac cacgcacttt
    11521 ctggtcaccg ccggagcaga acgctttatc acctgcgcca gtcagaatga tcacgccgac
    11581 gttgtcgtca taacgcgcat ctgccagtgc ctggatcatc tcttttaccg tcagaggacg
    11641 gaaggcattg cgcacctgcg gacgattaat ggtgattttt gcgataccat cggtggattt
    11701 ttcataacga atgtcctcga aaccttcgga gcagtcgtgc cattcaaccg gtgcgtaaag
    11761 cattgcttca tcaggataaa tcatattgtg tcctttagtc agaaacgcaa gatctgcgcc
    11821 agacttgcga ttacgccagc gggattttcc cgatgcgcgt tatgtccggc gcgaggaatg
    11881 acatggcagt cggcagccag ttccgccgcc agggcgcgga atttgctgtc acgttcacca
    11941 cataaataat aaaacgcaaa tgtgcgggcg ctaaggttag cacgtaaatc aggctggacg
    12001 gcgagagaag tcgcctccag catggcggca agggttgcgc cattattgtt gctgcgcagc
    12061 gccaccagct cccggcgttg atcgtcattg agcgaggcaa aaacaggctg ttgataccag
    12121 tcggcaaata ccgccgttaa cggttctgtg cgaaaacgct gcgcccattg gcgatcggaa
    12181 cgctgacgtt ccgcacgttg ttcagcattt tgcagccccg gatgcccgcc ttcgacaata
    12241 accccacaaa gccccgccag cccctggcaa gccgccatca tcgccacccg tccgccaagc
    12301 gagtacccca ccagccagaa gtcaaggatg ttgtaactaa ccaaggtttt acgcagtaag
    12361 tcggtgacat catcaaatcc atcgacgcta atcgccgccg aaccaccatg acctgggaga
    12421 tcaacataca accgtgagta gtcggcaaac gcctcgccca cttcttgcca ttcgtggcaa
    12481 tcgccggaaa aaccgtgcaa aaacaccagc cagggtaaac ctggttttcc gtgttttgcc
    12541 tgcgcgtgca ggatcataaa tggcttacct gcgccagaag ttgctggagc gtttgcgcac
    12601 catcggtgtc gttaaccacc atttcaatca ccgtggtggt tggcgtgcgc caggcgtcgg
    12661 caaatgccgt ttcaagttcc tgccagtttt gcggacgatg atatttcagc tcgaacatcg
    12721 cggcggcgtg ctcaaaatgg acgttttgcg gcatcagata gaaacgctca cgctcgcttt
    12781 gcggcgttgg caacagcgag aaaatttgcc cgccgttgtt gttcaccaca attaatacca
    12841 gcggcgcaga aacctgacgc aataacgcca gcgcgttgag atcgtaaagt gcggagagat
    12901 cgcccacaat cgccagcgtc ggtttgccgc ttgcccgctg aacgcctgcg gcggtcgaaa
    12961 gcagtccgtc gataccgctg gcccctcggt tgctgtacac cgggtaacct gccggaagtt
    13021 gcgaaagcgc atcaatcaga cgtaccacca ggctgttacc gacaaacaat tgcccctgtt
    13081 caggcagata gtcgctgatg cgatgcgcca gttgcgcttc gccaaacgca tcgcgacggg
    13141 caataaccgc ctgcattgcc tgttccgcca ggcgcgggat ttcaacgcac cagggctggc
    13201 gtttttctgc cggatgcagc tccagccagt cggcaatatt ggcaattaag cggcgtccac
    13261 gatggtgcgc cggatcaagc cgcccttcga tgtcatccac aatccagtac tcttcgggtt
    13321 cacagcttgc ctgccattgc aggagccgtt tgcccgtcag gctgcttccc agttgcacca
    13381 caatttgcgc ctgctgcagc tcgctggtcg ctttggcatt gcctaaccaa agatcggcac
    13441 acggcagcgg ctgcccggtt tgtgacagca catcgccaat cagcggccag ccaagagttt
    13501 gcgcccacag ggcaactttt ttgccctctt ccgcactcat gcgcccggca accaccacgc
    13561 cgcgcttttg tcgccagaag aaccagtcgc gctgtttttc actttccaga ctaggcgctt
    13621 cacgcagcca cggtttgtcg tcctgccacc agtcacccag acgctgttgc cagctaagcc
    13681 cggtatcgtc catttcgcca tacagcggtt cagcaaacgg gcagttgata tggactcccc
    13741 ccgcatgaag cgtaccgaga gcgtggtcga tggtagaaac cagccaacgt gcggggatat
    13801 cctgggtcgg gcgcggcaat gaaatactgt gcgtggggtg agaggcgaac attcccggct
    13861 ggcgaattgc ctgattcgcg ccgcagtcaa ttagctccgg cgggcgatcg gcggttaaga
    13921 gaatcagttt ttctccggtt aacccggctt caatcagtgc cggatagaga tttgccaccg
    13981 ccgtgccgga ggtcacaatc accgccaccg gctgcttgct gactttcgcc agccccagcg
    14041 ccagatgccc caacccacgc tcatcgaaat gggtgtggtg aatgaatgcg gaattctccg
    14101 ccgccgctaa cgttaacggt gtagaacgcg agcctggggc gatacagatg tgtctgacgc
    14161 cgtgacgcgt taatgcttcc agaatgaccg ccgcccagcg tcggttaaat gcgcttactg
    14221 acatgagttt gtccggtatc aatattgcgg ctaagtataa ggagctacaa aaatagatta
    14281 ttgatatgaa tcggtaatga tgcgactcat tactattcca tttgtaataa agtacgcaac
    14341 cctgccgctt tgttgtcgat ttcctgccac tcttgctcgg ggtcggaacc acggacaatg
    14401 cccgcgccag catataatcg cacgacattg ccgctaattt ttgctgagcg cagggaaacg
    14461 cagaattcgc tttgttgtaa tgagagatag cccgcagaac cggcgtacca ttctcgggtg
    14521 aacggttcgt gacgggcgat aaactgtcgc gccagatcgc gcggtaagcc agcaactgct
    14581 gccgttggct gcaactgatg taaacagatc acatcatccg ctttgttgag tgaagtccag
    14641 atacagcggc gaagatgctg cactttacgc agacgcagta cctgcggcgg taaaacatcc
    14701 agcgtctggg tatcggcctg taatcgttgg cagatatctt ccaccaccag catgttctcg
    14761 cgctggtttt tatcatccgc catcagccac tcttctaact gctgcgcctg cttatcatca
    14821 ggatgatttg ctactgttcc cgccagcgct tcagtacgca gcgctttgtc acgccgccgc
    14881 cataaccgtt ccggtgaaga gccaagaaaa gcattttcgc catcaaaggc catgtaaaaa
    14941 tggtagcaat tcagattcag tcgacgactg gcagccatca tcgccgccgc gttgaccgga
    15001 cttgcgaaat gcaggtcagt tgcccgagcg agcaccactt tgtcgagctc accttcggcg
    15061 atggttttcg ttgccagttc gattaattgc gtccagcccg ttttgtccgg ccagtgttgt
    15121 tctcgcgtgg tggttaaatg taacccaggc aagggcttga tactcaccag tgtggcgata
    15181 aattcttttg cctgaatcgc atcgtgctga agggagcttt cgctgaatag cgtcagccgc
    15241 agcgtggctt taccgccaca gcgtcgccat tccaggcggg gtaaaagtaa attgccctgc
    15301 gacgggtcaa aagcattcag cccccaaatg cgtaagtcgg cgtgttccgg gtgctggcga
    15361 agaaaacgtt gtgcctggtc caacgacgta aaacgggtaa tcgcgcccag gacggcagct
    15421 tcttcatcac cattacgttg ttgccagtag aattgcgggt acgtttgctg actggccagc
    15481 cagctcaagg catcaaaagc gtctttgaga gggaaaggaa tatcgataac ccgaatgccg
    15541 ggtgtcgccg gaatctcttg cgacaaatgg cgcagtagat tttccagcgc cgtagtaagt
    15601 gattgcacgc ggacctctcc ctgttaaaag cctcacatta tacggggtac tacaaaaaaa
    15661 atgcagtacc ccggtgtagg gaggttttaa cggcgtgcca gcaacagtcc tagtaccagc
    15721 ccaacggccg cgcccacacc aattccttgc caaggttttt cgtggacgta gtcatcagca
    15781 cgataaacag cctgcttcgc ccgatagtaa taactgtctg aaacctggct aacccgtttt
    15841 ttcacatcat ccagcgcttt ttctgcacgc gctttcagct caacatattt ctgatcagcg
    15901 ggatcgccag aggagcggag cacctcttcc agtgtctcac taagcagcgt caggtcgtca
    15961 tcgatacgtg tatcaccaaa ctgattagac attctcgttc tccatttgcg taaaacctgt
    16021 cactaactat agacaagggt tgttgattac gcctgaatta cctcgcgtgc catcccaatg
    16081 tgtgggatac catcttcttc atagacctcc gtcacaggga taaaaccgaa actctggtag
    16141 aagttttgca gatgcgcctg cgccccgagg taaacaggct tatcaggcca gtgatgcgtg
    16201 caggtgtcga gggttttact catcagttgc tgccccactt tttcgccacg caacgcttca
    16261 ctgacaatca cccgaccaat aacgaccggc tcaagatcat catcactttt cagaatcctc
    16321 gcatatgcca ccagttcatc atttttccaa ccgagaatat ggcgattatc ccccgtcaaa
    16381 tcatcaccat cgatatcctg ataagggcaa ttctgctcga caacaaacac cgcgcaacgc
    16441 agttgtaata aggcataaag ctgggaaacc gataattcag agtgatgcag atcttgccat
    16501 tcaatcataa tgctctcctt ttagatgtat accttatact agccggaata ttttttgaaa
    16561 cgtgatgaac tcatggaatt aattttttta ggtacttcag ccggtgtgcc aacccgcacg
    16621 cgcaatgtca cggcaatatt gcttaacctg caacatccga cccagagcgg actttggttg
    16681 tttgactgcg gtgaaggcac ccagcatcag ctactgcata ccgcctttaa ccctggaaaa
    16741 ctggacaaga tttttatcag tcaccttcat ggcgatcatc tttttggttt acccggcttg
    16801 ctgtgcagtc gttctatgtc aggcattatc caacccttaa cgatttatgg tccgcaaggt
    16861 atccgtgaat ttgtggaaac cgcgctgcgg attagcggct catggaccga ttatccgctg
    16921 gaaattgtcg aaattggcgc tggcgaaatt ctcgatgatg gcctgcgcaa agtaaccgct
    16981 tatccgctgg aacacccact ggaatgttat ggctatcgta ttgaagaaca tgataaaccg
    17041 ggtgcattaa atgcccaggc attaaaagct gctggcgtgc cgcctggccc actgtttcag
    17101 gaattaaaag cgggcaaaac aatcacgctg gaagatggaa ggcagattaa cggcgcagat
    17161 tacttagctg ctccagtgcc aggtaaagcg ctcgctattt tcggcgatac cggcccctgc
    17221 gatgccgcac ttgacctggc taaaggtgtc gatgtcatgg tgcacgaagc gacgctggat
    17281 ataaccatgg aagccaaagc caatagtcgc ggccatagct ctacacgcca ggctgcgaca
    17341 ctagcccgtg aggctggagt cggtaagcta atcattaccc acgtcagctc gcgctatgat
    17401 gacaaaggtt gtcagcacct gttacgtgaa tgcaggtcaa ttttcccggc gactgaacta
    17461 gcgaatgatt tcaccgtgtt taacgtttaa ctct
//
LOCUS       DADMIB010000086        17483 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.086, whole genome shotgun sequence.
ACCESSION   DADMIB010000086 DADMIB010000000
VERSION     DADMIB010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17483
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.086"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(34..2631)
                     /gene="topA"
                     /locus_tag="JNZ89_002612"
     CDS             complement(34..2631)
                     /gene="topA"
                     /locus_tag="JNZ89_002612"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HAY8936447.1"
                     /translation="MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAA
                     KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK
                     ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
                     RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
                     FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT
                     TSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
                     VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ
                     LIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL
                     PAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
                     YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH
                     FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
                     PPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV
                     CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR
                     KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE
                     ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV
                     DGKWVEGKK"
     gene            3011..3262
                     /locus_tag="JNZ89_002613"
     CDS             3011..3262
                     /locus_tag="JNZ89_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciN family protein"
                     /protein_id="HAY8936448.1"
                     /translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV
                     FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD"
     gene            complement(3298..4347)
                     /gene="sohB"
                     /locus_tag="JNZ89_002614"
     CDS             complement(3298..4347)
                     /gene="sohB"
                     /locus_tag="JNZ89_002614"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HAY8936449.1"
                     /translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV
                     NNLSEQYKEMKEELAAALMGSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR
                     VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR
                     LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKY
                     IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT
                     GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD
                     RLLLRWWQRGQKPLM"
     gene            4567..5325
                     /locus_tag="JNZ89_002615"
     CDS             4567..5325
                     /locus_tag="JNZ89_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciK family oxidoreductase"
                     /protein_id="HAY8936450.1"
                     /translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR
                     NEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGL
                     LGDICPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
                     NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA
                     DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ"
     gene            5322..5913
                     /gene="cobO"
                     /locus_tag="JNZ89_002616"
                     /pseudo
     CDS             5322..5913
                     /gene="cobO"
                     /locus_tag="JNZ89_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
     gene            complement(5953..6825)
                     /gene="rluB"
                     /locus_tag="JNZ89_002617"
     CDS             complement(5953..6825)
                     /gene="rluB"
                     /locus_tag="JNZ89_002617"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HAY8936451.1"
                     /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEV
                     TPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
                     WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGV
                     QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
                     PLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
                     QVSGGRRSGGRNNG"
     gene            complement(7036..8931)
                     /locus_tag="JNZ89_002618"
     CDS             complement(7036..8931)
                     /locus_tag="JNZ89_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HAY8936452.1"
                     /translation="MAGKFRCILLLIAGLFVSSLSYAENPEIPSYEEGISLFDVEATL
                     QPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEP
                     WHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF
                     EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVL
                     YRWPHALLSNAPAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVD
                     VIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQYDKNQQILICV
                     NEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSLF
                     YRPDTFLQWGGLAILAIILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFAR
                     DDDKPCVNRAIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVCLTGYLTGM
                     GYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISAN
                     LGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAG
                     GGGGGGW"
     gene            complement(8959..9579)
                     /locus_tag="JNZ89_002619"
     CDS             complement(8959..9579)
                     /locus_tag="JNZ89_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HAY8936453.1"
                     /translation="MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKI
                     EDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILK
                     GTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI
                     KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL"
     gene            complement(9576..10457)
                     /gene="yciV"
                     /locus_tag="JNZ89_002620"
     CDS             complement(9576..10457)
                     /gene="yciV"
                     /locus_tag="JNZ89_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exoribonuclease"
                     /protein_id="HAY8936454.1"
                     /translation="MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITD
                     HDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQ
                     QTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
                     FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAE
                     HHGDAMEVAQCQQSPNERTQLTTLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVE
                     GVWQLWEQPQNTTEREL"
     gene            10595..10639
                     /gene="trpL"
                     /locus_tag="JNZ89_002621"
     CDS             10595..10639
                     /gene="trpL"
                     /locus_tag="JNZ89_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon leader peptide"
                     /protein_id="HAY8936455.1"
                     /translation="MKAIFVLKAWWRTS"
     gene            10731..12293
                     /gene="trpE"
                     /locus_tag="JNZ89_002622"
     CDS             10731..12293
                     /gene="trpE"
                     /locus_tag="JNZ89_002622"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HAY8936456.1"
                     /translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADID
                     SKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQSPNCRV
                     LRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED
                     LPQLSAENNCPDFCFYLAETLMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQ
                     LTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPS
                     PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR
                     RADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR
                     YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG
                     GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLR
                     AIATAHHAQETF"
     gene            12293..13888
                     /gene="trpD"
                     /locus_tag="JNZ89_002623"
     CDS             12293..13888
                     /gene="trpD"
                     /locus_tag="JNZ89_002623"
                     /EC_number="2.4.2.18"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase glutamate
                     amidotransferase component TrpG/anthranilate
                     phosphoribosyltransferase TrpD"
                     /protein_id="HAY8936457.1"
                     /translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL
                     ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
                     EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
                     ADRVCGFQFHPESILTTQGARLLEQTLAWAQRKLEPTNTLQPILEKLYQAQTLSQQES
                     HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
                     VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
                     KSRQALDELGVCFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
                     YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
                     GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA
                     QTVLEVLRSGSAYDRVTALAARG"
     gene            13892..15250
                     /gene="trpCF"
                     /locus_tag="JNZ89_002624"
     CDS             13892..15250
                     /gene="trpCF"
                     /locus_tag="JNZ89_002624"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309861.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HAY8936458.1"
                     /translation="MQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDALQ
                     GARTAFILECKKASPSKGVIRDDFNPARIAAIYKHYASAISVLTDEKYFQGSFDFLPI
                     VSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGG
                     LTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGIN
                     TYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGA
                     IYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLH
                     GNEDQLYIDTLREALPTHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWS
                     LLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTLR
                     AY"
     gene            15262..16455
                     /gene="trpB"
                     /locus_tag="JNZ89_002625"
     CDS             15262..16455
                     /gene="trpB"
                     /locus_tag="JNZ89_002625"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016158396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HAY8936459.1"
                     /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
                     FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
                     KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
                     SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVCEFQRMIGEETKAQILE
                     REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV
                     GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE
                     AFKTLCLHEGIIPALESSHALAHALKMMRETPEKEQLLVVNLSGRGDKDIFTVHDILK
                     ARGEI"
     gene            16455..17261
                     /gene="trpA"
                     /locus_tag="JNZ89_002626"
     CDS             16455..17261
                     /gene="trpA"
                     /locus_tag="JNZ89_002626"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HAY8936460.1"
                     /translation="MERYESLFAQLKERKEGAFVPFVTLRDPGIEQSLKIIDTLIEAG
                     ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY
                     ANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADD
                     DLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPD
                     QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS"
BASE COUNT         4220 a         4673 c         4345 g         4245 t
ORIGIN      
        1 cctttgttta taaaaacctg acagaattaa aggttatttt tttccttcaa cccatttgcc
       61 atcaacataa aatgctgacc agccagtcgc ctttccgtct ttttccgaag agacatattg
      121 ctgtttggtt ttacggctaa agcgaaccat ggtcttatta ccttccggat cctgctgtgg
      181 cgcatcggcc agataacgca gtttttccgg cagacggtcg cggaagcgat aaagctcttc
      241 caccagtggc gcacgcgttt cacgcgattt cgggaaagtg ttggcagcca ggaaaacacc
      301 cgcagcgccg tcacgcagca cgaaataagc atctgatttt tcgcacggca gctcaggtaa
      361 tggcaccgga tcttctttcg gtggtgccac ttcgccgtta cgtaaaatct tacgtgtgtt
      421 tttacactct tcgttggtgc aggccatgta tttaccgaaa cgccccattt tcaggtgcat
      481 ttcagagcca catttttcac actcaacgat cgggccgtca taacctttaa tgcggaattc
      541 gccctcttcg atctcgtaac cgtcgcaggt tgggttatta ccacagacat gcaacttacg
      601 tttcggatcg atgagatagc tgtccatcgc cgtgccgcat ttcgggcaac gacgttttgc
      661 gcgcagcgcg ttggtttcag cgtcttcgcc ttccagtacg ttcagcactt cgttttccgg
      721 caccaggtta atggtggttt tgcaacgctc tttcggcggc agcgcataac cagaacagcc
      781 aaggaatacc ccggtgctcg ctgtgcgaat ccccattttg cgaccacaag tcgggcagtc
      841 aatgctggtc agaaccatct ggttcgggcg cataccaccc tcttccggat ctttttcagc
      901 tttatctaac tgctgggtga aatccgagaa gaagtgatcc agtacagctt tccactctgc
      961 ttcgtgattt gccacctggt cgaggctgtt ttccatctgt gcggtgaagt cgtagttcat
     1021 taactcgcgg aaattttctt caaggcgatc ggtgacgatt tcgcccattt tttccgcata
     1081 gaaacgacga ttttctactc gcacgtagcc acgatcctga atggtcgaaa tgatcgacgc
     1141 ataggtagac ggacgaccga taccgcgttt ttccagctct ttaaccagcg atgcttcact
     1201 gaaacgggct ggcggcttgg taaagtgctg ggctggtgta agttcaacga gcgtcagagc
     1261 atcgccttta ttaactgctg gtaagatgcg atcttcatcg cctttacgca acgcaggcat
     1321 cacttttgtc cagccatcaa aacgcaaaat acgacctcgt gctttcaggc ggaaatcgcc
     1381 cgcaccaacg gtcagcgtcg tggagtcata tttcgctggg gtcatctggc aggctacgaa
     1441 ctgacgccag attaactggt acagtttctg cgcatctgct tccatatcct tcagcgattc
     1501 cgccatcaca ttgacgtcag aaggacgaat cgcttcgtgc gcttcctgtg agttttcttt
     1561 gctggcgtac tgattcggac tttccggcag atatttctta ccaaaattat cgctgatata
     1621 accgcgaacc atatttaccg cgtcctgact caggttagtg gagtcggtac gcatgtaagt
     1681 gatatagcct gcttcataca aacgctgcgc catcatcatg gtttttttca cgccaaatcc
     1741 aagacgggtg ctggcagctt gttgcagcgt agaggtaata aaaggagcgc caggtttact
     1801 ggttgtcggt ttgtcttcac gttccagcac gctgtagcgc gctttttcca gcagacttac
     1861 cgcagcctga gtttgttctt tgttgaccgg acggaacggt ttgtcgttct gatgagtcac
     1921 ctgtaacgcc aacgcttcac cagatggcgt ggtcgtgctg gcatcgactt cccagaactc
     1981 ttccggcacg aacgctttaa tttcacgctc acgctcgacc accaggcgaa ccgccaccga
     2041 ctgcacacga ccggcagaca gaccacgagc gatctttttc catagcagcg gcgaaaccat
     2101 ataccccacc acgcggtcca taaagcgacg cgcctgctgg gcattaacac gatcaatatt
     2161 cagctcaccc ggtttgttaa atgcctggcg gatcgcgttt ttagtaattt cgttaaacac
     2221 cactcggcta tagcgcgcat catcaccccc aatcacttcc cgcaggtgcc atgcaatggc
     2281 ttccccttcg cggtcaaggt cggttgcgag atagatgtgg tcggcttttt cagccagttg
     2341 tttcagttca gagacgacct tctctttacc aggcaacact tcatagtgcg cctcccaatt
     2401 gtgccacggg tcaaccccca tacggttgac gagagcgcca cgttcatcct ttttaggctt
     2461 tttagccgtc ttggtggagg tagagtcggc actctttttg gcagctgagc cactggtcgg
     2521 caaatcgcgg atgtgaccga cgctggattt caccacgtag tcactaccca gatacttgtt
     2581 gatcgttttg gcttttgccg gggactcaac gatgacaaga gctttaccca tattcacctt
     2641 acctaatttg attcttccag gaatgcgtcg cacgttgata aaccttccac tggcaacgag
     2701 ttaccgatat ggactcgttc tctgcggata tcaacccctt gtcgtgactc tgttcacgaa
     2761 aattcaggtg actgagttaa caggtcttgg cctacaggcg ctatagcacg acggaatttt
     2821 ggtcgaatgt caagcaaatc tattgccaga ttgacgaaag cgtcacactg tacctgataa
     2881 aatccgatac gcaactttat tagcatgcaa aatccaaagt tgccagtaag gcgctcttgc
     2941 caccagcgtg gtatatttgt ctgcaagcca tgcctggcgt agactaatgt ccttatttaa
     3001 ggagtaaata atgaacaaag agacacaacc catcgaccgc gaaacgctgt tgaaagaggc
     3061 caacaaaatc attcgtgagc atgaggatac gctcgcaggg attgaagcca ccggcgtcac
     3121 gcagcgtaat ggcgtgctgg tatttaccgg cgactacttt ttagatgaac aaggattgcc
     3181 aacagccaaa agcaccgcgg tgtttaatat gttcaaacac ctggcccatg tgctttcaga
     3241 aaaatatcat ctggttgatt aaagcaaaac gcgaggtctt agcctcgcgt ttgtctttta
     3301 catcaatggc ttttgacccc gctgccacca gcgtagcaac aatcgatcgg cgctctctgc
     3361 cgcgctgccg gtgaatcggt caatgagtcg tttacgctgc atatagcgta cattaaccac
     3421 ttcacggcct tccatcaggc taagaataac ttcatcactg gtgttgattt catcaaccag
     3481 gcctttctct accgcctgtt gtccgtacca gtgttcacct gttgccacct gttcaatatc
     3541 cagagacgga cgcatacgct tcacaaaatc tttaaacaac tgatgcgttt cgttcaactc
     3601 ttcgcggaat ttctcccgcc cttcttcggt attttcaccc agcaacgtca gagtacgctt
     3661 atactgcccg gcagtgtgca gttcgatatc aatatatttg cttttcagga agcggttaaa
     3721 gttgggcatt tgcgccacca ccccaatgga acccacaata gcaaacggtg cggaaacaat
     3781 tttgtccgcc acacaggcca tcatgtaacc gccgctggca gcgactttgt ctaccgtaac
     3841 agttaaagga atgtttttat cacgcagacg ctgcagctgc gaagccgcca acccgtaacc
     3901 atgcaccatg ccaccagggc tttccagacg gagcacaacc tgatcctgcg gtttgaatgc
     3961 tgcgagtacc gccgttatct cttcacgtag cgagttcact tcatgggcgt ccatgctgcc
     4021 tttaaaatcc agcacccaga cgcgaggttt actgtcagtt gccacctcgc ccagtttggc
     4081 tttcgctttt gctgctttcg cttcttgctt gtgctttttc ttctgcgctt tgtgccactg
     4141 tttttgctga tgtgagccca tcagcgccgc ggccagttct tctttcatct ccttatactg
     4201 ttcgctgaga ttgttgaccc gtaactcgcc acgctggcgt ttattacgtt gagcaacatt
     4261 gacaataatg gcggcaatcg ccgcaatcgc tagcacaacg gtaacgattt tcgccaaaaa
     4321 caaaccatat tcagacaaca attccacgag tccccacctt ggttaaacaa cgctttggct
     4381 cacagtttac aacaggcatg ttaagccgtc tcgcagagat gttattgcag cgaaagtatg
     4441 acaaagtatc cattttgcgg tgttatcgcc ccaggctgat tgaaatgccc ttctgtttca
     4501 ggcataaagc cccaaagtca taaagtacac tggcagcgcg acagacaacg tcgttgagga
     4561 gtagccatgc attaccagcc aaaacaagat ttactcaatg atcgcattat cctggtgacg
     4621 ggagccagcg atgggattgg tcgtgaagcc gcgatgacgt atgcacgcta tggtgcgaca
     4681 gtgattctgt tgggccgtaa tgaagaaaaa ttacgtcagg tagccagcca cataaacgaa
     4741 gaaactgggc gtcagccaca gtggtttatt ctcgatttgc tgacctgcac gtccgaaaat
     4801 tgccaacaac tggcacagcg cattgtcgtt aattatccgc gtctggatgg tgttttgcat
     4861 aatgccggat tgctcggcga tatttgccca atgagcgaac aaaatccgca ggtctggcag
     4921 gacgtcatgc aggtcaacgt taatgccacc tttatgctca cccaggcact gcttccttta
     4981 ttactcaaat cggacgccgg ttcactggtc tttacttcat caagcgttgg acgtcaggga
     5041 cgagctaact ggggtgcata tgcagcgtcg aaatttgcca ccgaagggat gatgcaggta
     5101 ctggccgatg aatatcagca gcgcctgcgc gtcaactgca ttaacccagg cggtacgcgc
     5161 accgcaatgc gcgcaagcgc cttcccgacc gaagatccac agaaacttaa aacacccgct
     5221 gatatcatgc cgctctacct ctggctgatg ggcgatgaca gccgccgtaa aaccggcatg
     5281 acctttgacg cccaaccggg ccgtaaacca ggaatttccc aatgagtgat gaacgctacc
     5341 aacagcgtca gcagcgagtg aaagaaaaag tagatgctcg tgtggcacag gccccaggat
     5401 gaacgcggta ttatcatcgt ctttaccggc aatggaaaag gcaaaaccac cgcggcattt
     5461 ggtacggcaa cacgcgcagt tggtcacgga aaaaaagtgg gcgtcgtgca gtttattaaa
     5521 ggcacctggc ctaatggcga acgcaatctg ctggaaccac atggcgttga gtttcaggtg
     5581 atggcaacgg gctttacctg ggatacacaa aaccgcgagt ctgataccgc cgcctgccgc
     5641 gaagtctggc aacatgcaaa gcggatgctt gctgattcct cactggatat ggttttgctt
     5701 gatgaactga cgtatatggt ggcgtatgac tatttgccac tggaagaagt ggtgcaggcg
     5761 ttaaatgaac gtccacatca acagacggtg attatcacgg gtcgaggctg tcatcgggat
     5821 attcttgaac tggcggatac ggtaagtgag ctgcgcccca tcaaacatgc gtttgatgcc
     5881 ggtgttaagg cgcaaatagg gattgattat taatctgtaa aaatgccgga tatgacgtcc
     5941 ggcatacttt gattaaccgt tattacgccc gccagaacga cgaccgccgc tcacctgact
     6001 gtgacgtttc accgcacgac gaatctgatt agccttcatg cgacgacggt ctttttctac
     6061 agcgacttta gagctggttt ctggcggaag ctccaccagt tcgcgcagat agttagtctg
     6121 ggcgaggtcc agctccgtcc agccaccgcg tggcagacct tttggcagtg ggatatcacc
     6181 gtaacgaaca cggatcaggc ggctcacctg cacaccaacc gcttcccaca gacgacgaac
     6241 ttcacggtta cggccttcgg tcagagtcac gttgtaccac tggttgatcc cttcgccgcc
     6301 gctgaacttg atggttttaa aagctgccgg accatcttcc agttgcacgc cacgactcaa
     6361 atcacgcagt ttcgcgtcgt caacctgacc aaatacacgc acggcgtatt cacgttcaac
     6421 ttcacggctt ggatgcatta aacggtttgc cagttcacca tcggtggtga acagcagcag
     6481 accacaggtg ttaacgtcca gacgacctac ggcaatccag cgtgcgccac gcagctttgg
     6541 cagacggtca aacaccgtcg gacgcccttc cggatcgtta cgggtacaca actcaccttc
     6601 cggtttgtaa taggccagaa cgcgacaaat ttgttcagcg gactcacgta ccgaaatcag
     6661 atgaccatcg atacgaattt tcagcccagg ggtaacttca acgcgatcgc cgagtttagc
     6721 aattttgcca tcaacactca cacgaccggc ttcaataata gattcgattt cacggcggga
     6781 gccgtggcca gcgcgggcca gcactttctg taatttttcg ctcatagagc ttccttttgg
     6841 tgtcgccttc ccaggcgtct gatatgcttt tgtgcaacag tgagtcagaa cttacatctg
     6901 actcactgat agtaaagtct gtttgaactc ttcaggcctt aagtaaacga ctcgacgttt
     6961 atcggcctgg ctttgaggcg caacatacta cactatcttt atggttaaag cttgtttcga
     7021 ttaacatcag cttaattacc agccaccacc gcctccgcca cccgcgccgc cgccagcacc
     7081 accaccggaa taacttcgcc ccaacaaact ggtattggcc ccgcaactta ggtgcgtctg
     7141 taatgagaat aaaacgccgt tacgggcaat ctctggagcg cgaatcgccg aagaaagcga
     7201 aggggcaatg cgtaacgccc attccctccc caaatttgcc gatatagccc aacctagcaa
     7261 cgcgtaatcc agtttccgtg tttccccttt ccgccgacgt ccactgtgtg ttgctgcctc
     7321 tttacgcgca agatagttaa cgatagcttc accgcgggca taacgttgct gcccagtttg
     7381 ggtaaacttt ggcagaaaaa tataccccat gccagtgaga taaccggtca ggcaaacagc
     7441 gctaaaataa cccgctggca tataccagta aaagaataca tctccgacat tgatatagag
     7501 agaatagaag gccacgcctg aacaaatcag tggtaaaaac aaagtgatga ttgcacgatt
     7561 aacgcaaggc ttgtcatcat cgcgggcaaa caaaagctca agggaacaaa ataaaaaagg
     7621 aataatccag cagatcataa taaacatatc gcctaccaga ctcattcctg cccaacctac
     7681 gggactcagg ttaccgtaga gaatgatcgc caatattgcc agtccacccc attgcaaaaa
     7741 cgtatcaggc cggtaaaaca aagacttttt acgcggcaga taaaatttct gcatccgtaa
     7801 aaatgccctg cgtaagactc tgttgcgtct ccccgtaaga acgaccttat cgcctttacg
     7861 aaataacgct tccagtaata actgctctgc gggcagtaat acctcattat ttctggtcgc
     7921 gccttcatta acacaaatca ggatttgctg gttcttatca tactgatctt ccagatgaat
     7981 ttttcccttc acgatcagat ttacgatatc ggcacagaaa cctttatcgt cgtaaaccag
     8041 cttcgcatcg agacgtaaca tgccgggcgt gtaatctggc ggaatgacat cggtttcaat
     8101 cacatctacc ggcgtaaatt gcggcctgcg cttccagaga tataaccatc cacaaaccag
     8161 gaatagacac ggaaaccaaa ttaacaacga tgacgtggag ggtaaaagaa gatggctgaa
     8221 aatattcgtc gtttgtggag ccggggcatt gctaagtaac gcgtgaggcc agcggtagag
     8281 taccgtgaaa tcttcacgat aaaacggatc gcgggattct attcttccgt cctcaaggat
     8341 gcggccattt cgatatgtgt cgccctcttc tccagtaaag agatcgattt cgctaaatgg
     8401 attacccgcg atatcaggga acttgagtga aaatcgggtc ttatagattt caaacggcca
     8461 gtggttacca gtcacgttcc agattaacag atctgaatct ccctcacgca ggaaagcatt
     8521 tttaacctga taatgaattt gataatgata gtcgccttga ggcaagaaac gttgtttatc
     8581 gcccacgaca atactcatta acccgatatg ccagtcaaga tgccagggtt caggaatacc
     8641 atcacgagtg acgccaacaa tatgatagtt cagcagtgca gcgtccccat caggctgcat
     8701 ccagagtcgt ggtaaatcac gataaaatcc gtgcttaatc tgctgatttc gcgcctgaaa
     8761 atgaatattt tctttgatgt cgagcacccc atccggttgc agagtggctt caacatcaaa
     8821 gagcgagatc ccttcttcat aagaagggat ctccgggttt tctgcataac ttagagatga
     8881 tacaaacagc cctgctatca acagcaaaat gcagcgaaac ttccctgcca tagtcttcca
     8941 tccgtggaac gcaatttgtc ataagaaagg cttcacatca cccacgcctt cacgcaccac
     9001 gaccggcgta tcatcggtaa gatcaatgac cgttgtcggt ttctgtccga gatagccgcc
     9061 gtggataatc aaatccacct gtttttccag acggtcttta atttcttctg gatcggattc
     9121 ggtaaattcg ctgcctggca gcattagcga agtggaaagc atcggttcgc ccagtgcttc
     9181 aagcaacgcc tgcgcaatcg ggttagaagg cacacgcata ccgatggttt tgcgtttttc
     9241 ctgcaacaga cggcgtggca cctccttcgt ccccttcagg atgaaggtat agttgcccgg
     9301 cgtgttgttt ttcattaaac gaaacgcaac gttatccacg aatgaatagg tcgaaagttc
     9361 agaaagatcg cgacacatca gggtaaagtt gtgaccgtcc ggcagctggc gaatacgaca
     9421 aatacgctcc atcgcgtttt tatcttcaat tttacagccg agcgcatagc cggaatcagt
     9481 tggataaaca atcaccccgc ctttacgcac gatctccacc gcctggttga tcagacgttg
     9541 ctgcgggtta tcaggatgaa tataaaaaaa ctggctcata attccctctc tgtggtgttc
     9601 tgcggctgtt cccatagctg ccagacgcct tcaacgcctg cgggcagcca gagtttacga
     9661 cccagttcga tccacgggca tggctgatga aaatcagatc cttgtgatgc ccataaatga
     9721 tgctgacgcg caagtgtcgt caactgggtg cgttcattgg gcgattgctg gcactgcgcg
     9781 acttccatcg cgtcgccgtg gtgttcggca aaatgcgcaa ccaatctttt cagccattta
     9841 gcactaagat tgtaccgccc aggatgagct agcaccgcct taccgccaga atgatgaatg
     9901 acatcaatag cttgttctat tgtacaccac tgtggcggaa cgtatccggt tttcccgcgc
     9961 gccagatact ttttaaagac atctgccatt gaactggctt tgccgcactc aacaaggaaa
    10021 cgcgcaaaat gaccgcgcgt cactgcgccg ccctgcgcca gtcgttgtgc gccttccagc
    10081 gccccaggta tttgcgcttt ttcaagtctt tcggcaattt gctgcgcccg ctgattgcgc
    10141 cgttctgtct gctgcgcgag gaactcacac attagcggat gagtaatatc aatattcagc
    10201 ccgacaatat gaatttcatg attttcccag accgtggaaa tttccacgcc gggaataaga
    10261 ttcagcgcca gtcccgaacg tgaaatttcc tctcttgctg gcgcgattgc agctgtggtg
    10321 tcatggtcgg tgatcgccag ggtgccgacg cgcatctcga ctgcacggtg caccaatgct
    10381 tctggcgtca ggcagccatc ggaagctgtg gtatggctgt gcaggtcgta aatcactgcg
    10441 taattcgtgt cgctcaaggc gcactcccgt tctggataat gttttttgcg ccgacatcat
    10501 aacggttctg gcaaatattc tgaaatcagc tgttgacaat taatcatcga actagctaac
    10561 tagtacgcaa gttcacgtaa aaagggtatc gacaatgaaa gcaattttcg tactgaaagc
    10621 ttggtggcgc acttcctgaa acgggcagtg tattcaccat gcgtaaagca atcagatacc
    10681 cagcccgcct aatgagcggg cttttttttg aacaaaatta gagaataaca atgcaaacac
    10741 aaaaaccgac tctcgaactg ctaacctgcg aaggcgctta tcgcgacaac ccgactgcgc
    10801 tttttcacca gttgtgtggg gatcgtccgg caacgctgct gctggaatcc gcagatatcg
    10861 acagcaaaga tgatttaaaa agcctgctac tggtagacag tgcgctgcgc attacagcat
    10921 taggtgacac tgtcacaatt caggcacttt ccggcaacgg cgaagccctg ctgacactac
    10981 tggataacgc cctgcctgcg ggtgtggaaa atgaacaatc accaaactgc cgtgtgctgc
    11041 gcttcccccc tgtcagtcca ctgctggatg aagacgctcg cttatgctcc ctttcggttt
    11101 ttgacgcttt ccgtttattg cagaatctgt tgaatgtacc gaaggaagaa cgagaagcaa
    11161 tgttcttcgg cggcctgttc tcttatgacc ttgtggcggg atttgaagat ttaccgcaac
    11221 tgtcagcgga aaataactgc cctgatttct gtttttatct cgctgaaacg ctgatggtga
    11281 ttgaccatca gaaaaaaaac acccgcattc aggccagcct gtttgctccg aatgaagaag
    11341 aaaaacaacg tctcactgct cgcctgaacg atcttcgcca gcagctgacc gaagccgcgc
    11401 cgccgctgcc ggtggtttcc gtgccgcata tgcgttgtga atgtaaccag agcgatgaag
    11461 agttcggtgg cgtggtgcgt ttgttgcaaa aagcgattcg caccggagaa attttccagg
    11521 tggtgccgtc tcgccgtttc tctctgccct gcccgtcacc gctggcggcc tattacgtgc
    11581 tgaaaaagag taatcccagc ccgtacatgt tttttatgca ggataatgat ttcaccctgt
    11641 ttggcgcgtc gccggaaagt tcgctcaagt atgacgccac cagccgccag attgagatct
    11701 acccgattgc cggaacacgc ccgcgcggtc gtcgcgccga tggttcactg gacagagacc
    11761 tcgacagccg catcgaactg gaaatgcgta ccgatcataa agagctttct gaacatctga
    11821 tgctggtgga tctcgcccgt aatgatctgg cacgcatttg cacccccggc agccgctacg
    11881 tcgccgatct taccaaagtt gaccgttact cttacgtgat gcacctggtc tcccgcgtgg
    11941 tcggtgagct gcgccacgat ctcgacgccc tgcacgctta ccgcgcctgt atgaatatgg
    12001 ggacgttaag cggtgcgccg aaagtacgcg ccatgcagtt aattgccgag gcggaaggtc
    12061 gtcgccgcgg cagctacggc ggcgcggtag gttatttcac cgcgcatggc gatctcgaca
    12121 cctgcattgt gatccgctcg gcgctggtgg aaaacggtat cgccaccgtg caagccggtg
    12181 ctggcatagt ccttgattct gttccgcagt cggaagccga cgaaacccgt aataaagccc
    12241 gcgctgtact gcgcgctatt gccaccgcgc atcatgcaca ggagactttc tgatggctga
    12301 cattctgctg ctcgataata tcgactcttt tacgtacaac ctggcagatc agttgcgcag
    12361 caatgggcat aatgtggtga tttaccgcaa ccatattccg gcgcagacct taattgaacg
    12421 cctggcgacg atgagcaatc cggtgctgat gctttctcct ggccccggtg tgccgagcga
    12481 agccggttgt atgccggaac tcctcacccg cttgcgtggc aagctgccca ttattggcat
    12541 ttgcctcgga catcaggcga ttgtcgaagc ttacgggggc tatgtcggtc aggcgggcga
    12601 aattctccac ggtaaagcct ccagcattga acacgacggt caggcgatgt ttgccggatt
    12661 aacaaacccg ctgccagtgg cgcgttatca ctcgctggtt ggcagtaaca ttccggccgg
    12721 tttaaccatc aacgcccatt ttaatggcat ggtgatggca gtacgtcacg atgcggatcg
    12781 cgtttgtgga ttccagttcc atccggaatc cattcttact acccagggcg ctcgcctgct
    12841 ggaacaaacg ctggcctggg cgcagcggaa actagagcca accaacacgc tgcaaccgat
    12901 tctggaaaaa ctgtatcagg cgcagacgct tagccagcaa gaaagccacc agctgttttc
    12961 agcagtggta cgtggcgaac tgaaaccgga acaactggcg gcggcgctgg tgagcatgaa
    13021 aattcgcggc gagcacccga acgagatcgc cggagcagca accgcgttac tggaaaacgc
    13081 cgcgccgttc ccgcgcccgg attatctgtt tgccgatatc gtcggcaccg gtggtgacgg
    13141 cagtaacagc atcaatattt ccaccgccag tgcgtttgtc gccgcggcct gtgggctgaa
    13201 agtggcgaaa cacggcaacc gtagcgtctc cagtaaatct ggttcgtccg atctgctggc
    13261 ggcgttcggt attaatcttg atatgaatgc cgataaatcg cgccaagcgc tggatgagtt
    13321 aggcgtatgt ttcctctttg cgccgaaata tcacaccgga tttcgccatg cgatgccggt
    13381 tcgccagcaa ctgaaaaccc gcactctgtt caacgtgctg ggaccattga ttaacccggc
    13441 gcatccgccg ctggcgttaa ttggtgttta tagtccggaa ctggtgctgc cgattgccga
    13501 aaccttgcgc gtgctggggt atcaacgcgc ggcggtagtg cacagcggcg gtatggatga
    13561 agtttcatta cacgcgccga caatcgttgc cgaactgcat gacggtgaaa ttaagagcta
    13621 tcagctaact gcagaagatt ttggcctgac accctaccac caggagcaac tggcaggcgg
    13681 aacaccggaa gaaaaccgtg acattttaac acgcttgtta caaggtaaag gcgacgccgc
    13741 tcacgaagca gccgtcgcgg cgaatgtcgc catgttaatg cgcctgcatg gccatgaaga
    13801 tctgcaagcc aatgcgcaaa ccgttcttga ggtactgcgc agtggttccg cttacgacag
    13861 agttaccgca ctggcggcac gagggtaaat gatgcaaacc gttttagcga aaatcgtcgc
    13921 agacaaggcg atttgggtag aaacccgcaa acagcagcaa ccgctggcca gttttcagaa
    13981 tgaggttcag ccgagcacgc gacattttta tgatgcgcta cagggtgcac gcacggcgtt
    14041 tattctggag tgcaagaaag cgtcgccgtc aaaaggcgtg atccgtgatg atttcaatcc
    14101 ggcacgcatt gccgccattt ataaacatta cgcttcggca atttcggtgc tgactgatga
    14161 gaaatatttt caggggagct ttgatttcct ccccatcgtc agccaaatcg ccccgcagcc
    14221 gattttatgt aaagacttca ttatcgaccc ttaccagatc tatctggcgc gctattacca
    14281 ggccgatgcc tgcttattaa tgctttcagt actggatgac gaccaatatc gccagcttgc
    14341 agccgtcgct cacagtctgg agatgggggg gctgaccgaa gtcagtaatg aagaggaact
    14401 ggagcgcgcc attgcattag gggcaaaggt cgttggcatc aacaaccgcg atctgcgtga
    14461 tttgtcgatt gatctcaacc gtacccgcga gcttgcgccg aaactggggc acaacgtaac
    14521 ggtaatcagc gaatccggca tcaatactta cgctcaggtg cgcgagttaa gccacttcgc
    14581 taacggtttt ctgattggtt cggcgttgat ggcccatgac gatttgcacg ccgccgtgcg
    14641 ccgggtgttg ctgggtgaga ataaagtatg tggcctgacg cgtgggcaag atgctaaagc
    14701 agcttatgac gcgggcgcga tttacggtgg gttgattttt gtcgcgacat caccgcgttg
    14761 cgtcaacgtt gaacaggcgc aggaagtgat ggctgcggca ccgttgcagt atgttggcgt
    14821 gttccgcaat cacgatattg ccgatgtggt ggacaaagct aaggtgttat cgctggcggc
    14881 agtgcaactg catggtaatg aagatcagct gtatatcgat acgctgcgtg aagctctgcc
    14941 aacacatgtt gccatctgga aagcattaag cgtcggtgaa accctgcccg cccgcgagtt
    15001 tcagcacgtt gataaatatg ttttagacaa cggccagggt ggaagcgggc aacgttttga
    15061 ctggtcacta ttaaatggtc aatcgcttgg caacgttctg ctggcggggg gcttaggcgc
    15121 agataactgc gtggaagcgg cacaaaccgg ctgcgccgga cttgatttta attctgctgt
    15181 agagtcgcaa ccgggcatca aagacgcacg tcttttggcc tcggttttcc agacgctgcg
    15241 cgcatattaa ggaaaggaac aatgacaaca ttacttaacc cctattttgg tgagtttggc
    15301 ggcatgtacg tgccacaaat cctgatgcct gctctgcgcc agctggaaga agcttttgtc
    15361 agcgcgcaaa aagatcctga atttcaggct cagttcaacg acctgctgaa aaactatgcc
    15421 gggcgtccaa ccgcgctgac caaatgccag aacattacgg ctgggacgaa caccacgctg
    15481 tatctgaagc gcgaagattt gctgcacggc ggcgcgcata aaactaacca ggtgctcggt
    15541 caggctttac tggcgaagcg gatgggtaaa accgaaatca tcgccgaaac cggtgccggt
    15601 cagcatggcg tggcgtcggc ccttgccagc gccctgctcg gcctgaaatg ccgtatttat
    15661 atgggtgcca aagacgttga acgccagtcg cctaacgttt ttcgtatgcg cttaatgggt
    15721 gcggaagtga tcccggtaca tagcggttcc gcgacgctga aagatgcctg taacgaggcg
    15781 ctgcgcgact ggtccggcag ttatgaaacc gcgcactata tgctgggcac cgcagctggc
    15841 ccacatcctt atccgaccat tgtgtgtgag tttcagcgga tgattggcga agaaacgaaa
    15901 gcgcagattc tggaaagaga aggtcgcctg ccggatgccg ttatcgcctg tgttggcggc
    15961 ggttcgaatg ccatcggcat gtttgcagat ttcatcaacg aaaccaacgt cggcctgatt
    16021 ggtgtggagc cgggtggtca cggtatcgaa actggcgagc acggcgcacc gctaaaacat
    16081 ggtcgcgtgg gcatttattt cggtatgaaa gcgccgatga tgcaaaccga agacgggcag
    16141 attgaagaat cttactccat ctccgccgga ctggatttcc cgtctgtcgg cccacaacac
    16201 gcgtatctta acagcactgg acgcgctgat tacgtgtcta ttaccgatga tgaagccctt
    16261 gaagccttca aaacgctgtg cctgcacgaa gggattatcc cggcgctgga gtcttcccac
    16321 gccctggccc atgcgctgaa aatgatgcgc gaaaccccgg aaaaagagca gctactggtg
    16381 gttaaccttt ccggtcgcgg cgataaagac atcttcaccg ttcacgatat tttgaaagca
    16441 cgaggggaaa tctgatggaa cgctacgaat ctctgtttgc ccagttgaag gagcgcaaag
    16501 aaggcgcatt cgttcctttc gtcacgctca gggatccggg cattgagcag tcattgaaaa
    16561 ttatcgatac gctaattgaa gccggtgctg acgcgctgga gttaggtatc cccttctccg
    16621 acccactggc ggatggcccg accattcaaa acgccactct gcgcgccttt gcggcaggtg
    16681 tgactccggc acaatgtttt gaaatgctgg cactgattcg ccagaaacac ccgaccattc
    16741 ccattggcct gttgatgtat gccaatctgg tgtttaacaa aggcattgat gagttttatg
    16801 cccagtgcga gaaagtcggc gtcgattcgg tgctggttgc cgatgtgcca gttgaagagt
    16861 ccgcgccctt ccgccaggcc gcgttgcgcc ataatgtcgc acctatcttc atctgcccgc
    16921 caaatgccga tgacgacctg ctgcgccaga tagcctctta cggtcgtggt tacacctatt
    16981 tgctgtcacg agcgggcgtg accggcgcag aaaaccgcgc cgcgttaccc ctcaatcatc
    17041 tggttgcgaa gctgaaagag tacaacgctg cacctccatt gcaggggttt ggtatttccg
    17101 ccccggatca ggtaaaagca gcgattgatg caggagctgc gggcgcgatt tctggttcgg
    17161 ccattgttaa aatcatcgag caacatatta atgagccaga gaaaatgctg gcggcactga
    17221 aagtttttgt acaaccgatg aaagcggcga cgcgcagtta atcccacagc cgccagttcc
    17281 gttggcggca ttttaacttt ctttaatgaa gccggaaaaa tcctaaattc atttaatatt
    17341 tatcttttta ccgcttcgct tacccctgtc gaacgtcaac ttacgtcatt tttccgccca
    17401 acagtaatat aatcaaacaa attaatcccg caacataaca ccagtaaaat caataatttt
    17461 ctctaagtca cttattcctc aga
//
LOCUS       DADMIB010000087        17343 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.087, whole genome shotgun sequence.
ACCESSION   DADMIB010000087 DADMIB010000000
VERSION     DADMIB010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17343
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.087"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            191..2038
                     /gene="ldtD"
                     /locus_tag="JNZ89_002627"
     CDS             191..2038
                     /gene="ldtD"
                     /locus_tag="JNZ89_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY8936461.1"
                     /translation="MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV
                     SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD
                     MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY
                     LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA
                     AMHESLLALLSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGD
                     DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL
                     GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG
                     NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH
                     GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL
                     HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI
                     RQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR"
     gene            2219..2767
                     /locus_tag="JNZ89_002628"
     CDS             2219..2767
                     /locus_tag="JNZ89_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HAY8936462.1"
                     /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN
                     LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR
                     KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA
                     GGVGYYPRSNFVHIDTGPARHW"
     gene            2794..3441
                     /gene="gloC"
                     /locus_tag="JNZ89_002629"
     CDS             2794..3441
                     /gene="gloC"
                     /locus_tag="JNZ89_002629"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase GloC"
                     /protein_id="HAY8936463.1"
                     /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD
                     SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC
                     QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR
                     SDFPRGDHNQLISSIKDKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW"
     gene            complement(3663..4853)
                     /locus_tag="JNZ89_002630"
     CDS             complement(3663..4853)
                     /locus_tag="JNZ89_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009653304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HAY8936464.1"
                     /translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP
                     VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARMAQTPG
                     GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD
                     ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
                     RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK
                     AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
                     NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
                     VAVL"
     gene            complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="JNZ89_002631"
     CDS             complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="JNZ89_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpF"
                     /protein_id="HAY8936465.1"
                     /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY
                     FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
                     TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT
                     YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR
                     TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT
                     QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD
                     YIINQIDSDNKLGVGSDDTVAVGIVYQF"
     gene            complement(6728..8128)
                     /gene="asnS"
                     /locus_tag="JNZ89_002632"
     CDS             complement(6728..8128)
                     /gene="asnS"
                     /locus_tag="JNZ89_002632"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HAY8936466.1"
                     /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG
                     SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW
                     VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV
                     STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
                     YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA
                     VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG
                     VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
                     GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
                     VRDVIPFPRTPRNASF"
     gene            complement(8297..9499)
                     /gene="pncB"
                     /locus_tag="JNZ89_002633"
     CDS             complement(8297..9499)
                     /gene="pncB"
                     /locus_tag="JNZ89_002633"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706850.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HAY8936467.1"
                     /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD
                     DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN
                     DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL
                     TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ
                     AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR
                     YQGLRHDSGDPVEWGEKAIAHYKKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL
                     SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
                     LPHIKKAS"
     gene            9765..12377
                     /gene="pepN"
                     /locus_tag="JNZ89_002634"
     CDS             9765..12377
                     /gene="pepN"
                     /locus_tag="JNZ89_002634"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HAY8936468.1"
                     /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR
                     HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPEHFTLKIVNEISPAA
                     NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKTKYPFLLSNGN
                     RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
                     NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
                     LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
                     GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH
                     TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
                     KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVISLQKGGHPVNS
                     VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
                     AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE
                     MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN
                     ACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH
                     QDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH
                     AEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN
                     LSGDLYEKITKALA"
     gene            complement(12420..13171)
                     /gene="ssuB"
                     /locus_tag="JNZ89_002635"
                     /pseudo
     CDS             complement(12420..13171)
                     /gene="ssuB"
                     /locus_tag="JNZ89_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309043.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonates ABC transporter ATP-binding
                     protein"
     gene            complement(13168..13905)
                     /gene="ssuC"
                     /locus_tag="JNZ89_002636"
                     /pseudo
     CDS             complement(13168..13905)
                     /gene="ssuC"
                     /locus_tag="JNZ89_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001714028.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter permease
                     SsuC"
     gene            complement(13970..15115)
                     /gene="ssuD"
                     /locus_tag="JNZ89_002637"
                     /pseudo
     CDS             complement(13970..15115)
                     /gene="ssuD"
                     /locus_tag="JNZ89_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706856.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FMNH2-dependent alkanesulfonate monooxygenase"
     gene            complement(15112..16071)
                     /locus_tag="JNZ89_002638"
     CDS             complement(15112..16071)
                     /locus_tag="JNZ89_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8936469.1"
                     /translation="MRNIIKLALVGLLSVSTIAVAAESSPEALCIGYQKGSIGMVLAK
                     SHQLLEKRYPQSKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVG
                     VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
                     TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY
                     AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP
                     VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL"
     gene            complement(16064..16639)
                     /gene="ssuE"
                     /locus_tag="JNZ89_002639"
     CDS             complement(16064..16639)
                     /gene="ssuE"
                     /locus_tag="JNZ89_002639"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HAY8936470.1"
                     /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFVP
                     EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV
                     LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTR
                     LDTALETFWQALHRRDVQVPDLLSLRGNAHA"
     gene            complement(17096..17343)
                     /locus_tag="JNZ89_002640"
                     /pseudo
     CDS             complement(17096..17343)
                     /locus_tag="JNZ89_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706859.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         4372 a         4437 c         4398 g         4136 t
ORIGIN      
        1 taacggcgcg cttttcttta aacttcttta cattaggtta tgtaaaaacg tatcggcgtt
       61 tatatactga agataagcct gatgagtaac aggcttgctc gtcatacttt cgtgagtatt
      121 ggcgttgtac aggcaagtcg taaaataaca gcctggctat tcagagtatg ataaaaacag
      181 ggggcaaggg atgttgctta atatgatgtg tggtcgtcgg ctgtcggcaa tcagtttgtg
      241 cctggccgta acattcgctc cactgttcaa tgcgcaggcc gatgagcctg aagtaatccc
      301 tggcgacagc ccggtggctg tcagtgaaca gggcgaggca ctgccgcagg cgcaagccac
      361 ggcaataatg gcggggatcc agccattgcc tgaaggtgcg gcagaaaaag cccgcacgca
      421 aatcgaatct caattacccg caggttacaa gccggtttat cttaaccagc ttcaactgtt
      481 gtatgccgca cgcgatatgc aacccatgtg ggaaaaccgt gatgctgtta aagccttcca
      541 gcaacagctg gcagaggtgg cgattgccgg tttccagccg cagtttaata aatgggtaga
      601 gttactgacc gatcctggtg ttaacgggat ggcacgcgac gtagtgctct ctgatgcgat
      661 gatgggctat ctccatttca ttgcaaatat tccggtcaaa ggcactcgct ggctatatag
      721 cagtaaacct tatgcacttg caacgccgcc gctctcggtg attaaccaat ggcagctggc
      781 gctggataaa ggtcaattgc ctacgtttgt tgcaggactg gcaccgcagc atccgcaata
      841 tgcggcgatg catgaatcgt tactggcctt actcagtgac accaaaccgt ggccccaact
      901 gaccggcaaa gcaacgttgc gcccagggca gtggagtaac gacgtaccgg cgttgcgcga
      961 aatattgcaa cgcacaggca tgttggacgg ggggccgaaa attactctac ctggcgatga
     1021 cacgccaact gacgcggtag tcagcccatc cgctgttact gttgaaacag cagaaactaa
     1081 gccgatggac aagcaaacga cgtctcgtag taaacctgcg cctgccgttc gcgccgccta
     1141 cgataatgaa ctggtggaag ccgttaaacg ttttcaggca tggcaaggat tgggggcaga
     1201 tggtgctatt ggcccggcaa cacgtgactg gttaaacgta acgcccgccc agcgtgctgg
     1261 cgtgttggct ctcaacatcc agcgattgcg cttgctgcca acagagcttt ctaccgggat
     1321 catggttaac attccggcct attcgctggt ctactatcag aacggcaatc aggtgctgga
     1381 ttcgcgagtc attgtcggtc gccccgatcg caaaacgccg atgatgagca gtgcccttaa
     1441 caacgtagtg gtaaacccgc cgtggaacgt acctccaact ctggcacgca aagatattct
     1501 gccaaaagtg cgcaacgatc cgggatatct cgaaagccat ggctatacgg tgatgcgtgg
     1561 ctggaacagc agagaagcga ttgacccatg gcaggttgac tggtctacaa tcacggcctc
     1621 gaatttaccg ttccgcttcc agcaggctcc aggcccacgg aactcgctgg ggcgctataa
     1681 attcaatatg ccgagttcag aggccattta tttgcatgac acgccgaacc acaatctgtt
     1741 caagcgtgat acacgcgcat tgagctcagg ctgtgtacga gtgaataaag cttccgatct
     1801 ggcgaatatg ctgttgcagg atgcaggctg gaatgacaaa cgtatttctg atgcgctgaa
     1861 gcagggtgat acacgttacg tcaatattcg gcagtcgatt ccggtgaatc tctactacct
     1921 gacggccttt gttggtgcag atggtcgtac ccagtatcgt acagatattt acaattatga
     1981 tctgcctgcg cgatccagct cgcaaatcgt atcgaaagcg gaacaattaa tcaggtaaat
     2041 gaagtagttc ggggaaatca gttgtcgtaa taattagcat gattgggggc gattctctgc
     2101 agcccccgtc actgctgggg ttgagtcatc ttgacgtctg ctttacgggc ggttaaggtg
     2161 cctcttgtgc gccagaagtg catataaacg ataacattga cctgtagact tgattatcat
     2221 ggacaaattc gacgctaatc gccgcaaatt gctggcgctt ggtggcgttg cactcggtgc
     2281 cgccatcctg ccgacccctg cgtttgcaac actctctacc ccacgcccgc gcattttgac
     2341 actcaataat cttcataccg gagagtcaat caaagcggag tttttcgatg gcagaggcta
     2401 tattcaggaa gaattggcaa aacttaacca ttttttccgc gattaccgcg cgaacaaaat
     2461 aaagtccatc gacccaggat tattcgacca gttgtatcgc ctgcaagggt tgttaggcac
     2521 gcgcaaaccg gtgcaactca tttccggtta tcgttccatt gataccaaca atgaactacg
     2581 cgcccgcagc cgtggagtag cgaagaaaag ctatcacact aaaggccagg cgatggattt
     2641 ccatattgaa ggtatcgcgt taagcaatat tcgcaaagcc gcgttatcta tgcgcgcagg
     2701 tggtgtagga tattacccac gtagtaactt tgtgcatatt gataccgggc cagcacggca
     2761 ctggtagcaa tcgcttaacg aaacaggggc agtatgaact atcgtattat tccggtcacc
     2821 gcattctccc agaactgttc attaatctgg tgtgaacaaa cccgtctggc cgcactggtc
     2881 gatcctggcg gcgatgcgga aaaaatcaaa caggaagttg atgacagcgg cctgacactg
     2941 atgcagatcc tgctgacgca tggtcatctg gaccacgttg gcgcagcggc ggaactggcg
     3001 caacattacg gcgtgccggt ttttggcccg gaaaaagaag atgagttctg gctgcaaggc
     3061 ttgcctgcgc aaagtcgtat gtttggtctg gaagagtgcc agccgctgac gccagatcgt
     3121 tggctgaacg aaggcgatac catcagcata ggaaatgtga ctttacaggt gttacattgc
     3181 cctgggcata cgccgggtca tgtcgtgttt tttgatgatc gggcaaagct gctgatttct
     3241 ggcgatgtta ttttcaaagg cggagtaggg cgcagtgact tcccgcgtgg cgatcataat
     3301 caactgattt cttcaatcaa agataaattg ctgccactgg gggatgacgt gacatttatt
     3361 ccgggtcacg gaccattatc cacacttggt tatgaacgcc tgcataatcc cttcctgcaa
     3421 gacgaaatgc ccgtctggta aggcacataa aaaagcccgc ttttaatgcg ggcctggatt
     3481 tctggcaaag tgcgctttgt ttatgccgga tgcggcacga gcgccttatc cggcctacaa
     3541 aatcgtgcaa attcaaaata ttgcagggga cgcgtaggcc tgataagcgt agcgcatcag
     3601 gcaatgttgc gtttgtcatc agtctcagcc cgcttttcag cgggcttcat tgtttttaat
     3661 gcttacagca ctgccacaat cgcttcgcac agcggagcca tgttatctgg tgtcatcccg
     3721 gccacattta cgcgaccaga agcaaccgca tatacgccaa actcttcgcg cagacgcagc
     3781 acttgttctt ttgtcaggcc actgaaggag aacatgccgt tctgtttgat gataaagctg
     3841 aagtcgcggt ttgcgccttt ttcctgcagc gtattgacga acaactgacg catacgctga
     3901 atacgctggc gcatatcagt cagctcttgt tcccaaatcg cacgtaacgc atcgttgctc
     3961 aggatggtgg caacaacaga agcgccgtgt gctggtgggt tagagtagtt agcgcgaatc
     4021 gccgctttca tttggctgaa tgcgcgatca acggtttcac tgtcggcagc aaccagagta
     4081 caagcgccaa cacgctcgtt gtacaggcca aagtttttag agtaggaact ggcaacaatc
     4141 agctctttat gcatagccgc gaaagcgcgc agtccttcag catcttcttc cagaccacgg
     4201 gcaaaaccct ggtaagcgaa gtcaaacagc ggtaaccagc ctttctcaac ggagagttgt
     4261 gccagtgtct gccattgttc cagcgtaggg tcgataccgg ttgggttatg gcagcagcca
     4321 tggaacagca ctacgtcgcc agcctgagct tcattcaggc tgttaatcag tgcatcgaag
     4381 tcaagagtgt gattttccgc atcataataa gcgtattcac gaacttccag acctgcagag
     4441 ttaaagacgc tcttatggtt cggccagctt gggttgctca cccacactcg cttaacgctg
     4501 gtattttttg ccaggaaatc ggcagctacg cgtagtgcgc cagtgccccc cggagtctgt
     4561 gccatgcgag cacgtttgtc attgatcagg gcgctacctt taccaaacag cagttcctga
     4621 gtgcagcgac caaattcagg gatgccgtca atgccgaggt aatttttggt ggtttcattt
     4681 tcgagcagat actgttcagc ctttttcacg ctggtcagta ccggggtttt gcccgtctca
     4741 tctttataga caccaatccc gaggttaatt ttgccgggac gttcatcggc acgaaacaga
     4801 tcggccaggc ccagaatcgg gtcggcagga gcggcggtaa tgttctcaaa catgacgagg
     4861 ttccattatg gttacagaag ggaagtccgc tatcagggta acgggagatt tacaaaattc
     4921 caactattac tgatgaaaac gcaggctgtt tttgcaagac gtgagattgc tctggaaggt
     4981 ataaaaaaaa caggaccaaa gtcctgtttt ttcggcattt aacaaagagg tgtgctatta
     5041 gaactggtaa acgataccca cagcaacggt gtcgtctgaa cctacgccca gtttgttatc
     5101 agaatcgatc tggttgatga tgtagtcaac ataggtggac atgtttttgt tgaagtagta
     5161 ggttgcgccc acttcaaagt agttcaccag atcaacatca ccgatacctt ctacgtcttt
     5221 cgctttagat ttggtgtaag cgatggacgg acgcagaccg aaatcgaact ggtattgcgc
     5281 aactaacaga acgtcttgcg ttttgttggc gaagccgctg gtgtttgtaa atttattagt
     5341 gatcggcgta gcgttacggg tttcaccgta gttcgctgcc aggtagatgt tgttcgcgtc
     5401 gtacttcaga ccagtagccc actgttcagc ttttttaccg ttgccaagag gttgagcttc
     5461 ttgcaggttg gtacggtcag ctgcaccata agcaccaacg ataccaaagc cttcgtattc
     5521 gtagctgata gaaccgccaa caccgtcgcc gttagaacgg cgtgcagtgt cacgctcgtt
     5581 tttacccagg tactgaacag cgaagttcag gccatcaacc agaccaaaga agttggagtt
     5641 acgataggta gcaacgccgc caacacgacc aacgaagaag tcatcgctgt atgcagtatc
     5701 accaccaaat tctggcagca tatcggtgta acccagtgca tcataaacca caccgtagtt
     5761 acggccgtaa tcgaaagaac caacgtcagc gtatttaaga cccgcgaatg ccagacgcgt
     5821 tttgttacca gtttgagcgt cagcgccttc agagttgtta ccttggaagt tatattccca
     5881 ctgaccataa ccggtcagat cggaattgat ttgagtttcc cctttaaaac caagacgggc
     5941 ataggtcatg tcgccattgc caccgtaact gttttcaccg ttacccttgg aaaaataatg
     6001 cagaccaaca gctttaccgt acagatctac tttgttgcca tctttgttat agatttctgc
     6061 agcgtttgca gtacctgcta ctaacagagc agggacgatc actgccagaa tattgcgctt
     6121 catcattatt tattaccctc atggtttttt ttatgacacc tgccactgcc gtcaataagt
     6181 tctgtcaata aaaatttacg gaactattga tgagagtttg gtgtctttat gtgtctgcag
     6241 gcatctttcc attcaaacta acgtttcgct accgtgaaag tgctgcaaag ataaagattt
     6301 agtttcaaaa agaaaaaata tgtaaccaaa agtaaaaatt aaggaacttt gtgaacaccg
     6361 tcatatttcc atagaaacgt gatgatattt acagcaattt ttatctattt atatgattta
     6421 cttatattta aattaactaa gcggaaattt tgtttctgat ggaaacttta tcgacctggc
     6481 acaaaatcct ctttcagaca tccagaatgc caaaaaatag tatgaaaatt gtgctatcag
     6541 ctaagaaaaa actaatccgc aataagaata cgggttattt tttgtgcgta aatgttgcaa
     6601 tgtaatattc cgtaacagga tgatcgttat ggcggggttg caaatagatt gcttgactta
     6661 acaaacagat aacttgacag aaaggataaa aaagagccag caggcgctgg ctctttgagg
     6721 aagaaaatca gaagctggcg ttgcgcggag tacgtgggaa cggaatcaca tcacgcacgt
     6781 tttgcacgcc agttacgtaa gcaatcaggc gttcaaaacc aagaccgaaa cctgaatgcg
     6841 gaacagtacc gtagcgacgc agatcgcgat accaccagta atcttcttta ttcaggccca
     6901 tttccagcat acgctcgtcc agaacgtcca gacgttcttc acgctgggag cctccaatga
     6961 tctcaccgat gcccggagcc agaacgtcca tagccgcaac ggttttaccg tcttcgttga
     7021 ggcgcatata gaacgcttta atatctttcg gatagttttt aaccactacc ggtgctttaa
     7081 agtgttcttc cgccagataa cgctcatgct cagaagagag atcgacgccc cagtaaaccg
     7141 ggttttcaaa cttcctgccg cagttttcga gaatggtcac tgcgtcggtg taatccacct
     7201 gcgcgaaatc ggcctcaatg aagcgttcca gacgtgaaac ggcatcttta tctacgcgtt
     7261 cagcgaagaa tttcatgtcg tctgcgcgtt cttcgagaac cgctttgaag acatatttca
     7321 gcatggcttc agccagaccc gcgatatcgt tcaggttagc aaacgccact tccggctcca
     7381 gcatccagaa ttccgccagg tgacggctgg tgttggagtt ttcagcacgg aaagtcgggc
     7441 cgaaggtata aattttggat aatgcgcaag cgtaggtttc gccgttcaac tggccagata
     7501 cggtcaggaa agactcttta ccaaagaagt ctttgtcgaa atccactttg ccctgatcgt
     7561 tacgcggcag gttttccaga tccagcgtag aaacgcggaa catttcgcct gcaccttcgg
     7621 tatcagatgc ggtaatcagt ggcgttgaaa cccagaagaa tccctgctcg ttaaagaagc
     7681 gatgcagcgc ctgcgccagc gtatggcgaa cgcgcgcgac ggcaccaatc aggtttgtgc
     7741 gcggacgcag gtgagcgact tcacgcagat actcaatgct gtggcgtttt gccgccatcg
     7801 ggtaagtgtc tggatcttca acccaaccag caacttcaac tttgctggcc tgaatttcaa
     7861 attgttgccc ctggcccggc gacgccacga ctttacccgt cacaatgacc gagcagccgg
     7921 tggtcagacg caggacgtct tcattgtaat tgggcagaga attattgatg acagcctgta
     7981 caggatcaaa gcaggaaccg tcataaacgg cgaggaagga gatgccagct tttgaatctc
     8041 ggcgggtacg tacccatccg cgtacggtga cttcgctgtc aacggctacg cggccctgga
     8101 gtacgtcggc tacaggcaca acgctcataa tattctctct gttaatagtc ggaaaaaata
     8161 aacacttgtc cacccgtaaa tggggggata cctatgttac ctggcatctg caatcagaca
     8221 agcagaattc gcaaatgcag cgaaagattt cggaattaaa ggtaaaaaaa gggagctgat
     8281 tagctccctg atgatattaa ctggcttttt taatatgcgg aaggtcgaac gctttgcgca
     8341 gcgcccgaac aaacgcttta tcatggcaga tagttttgcc agggctgtca gaaagtttcg
     8401 ccaccggttt accgttacac tctaccaact taatcacaat attcaggggt tttacctggg
     8461 ggatatcgca ggtcaggcga gtcccaatac caaaacttaa ttgcacgcgg gaagagaagt
     8521 ggcggtatag ctcaaccgct ttgcgtaaat ccagattgtc agagaaaacc agcgttttac
     8581 tctgtggatc aattcccagc tttttataat gtgcaatggc tttttcaccc cattcaaccg
     8641 ggtcgccaga gtcatgacgc aggccctgat accgactggc gaactcgaca ccgaaatcac
     8701 gcaggaaagc atccatagtg atgcagtcgg ttaatgcaat gccaagttgg tcgggatatt
     8761 cttccagcca ggcagcaagt gcagctcgct ggctgttggc taggtccggg ctgatttgct
     8821 gatgtgcctg gaaccattcg tgcgcctgtg ttcccatcgg cgtgagggaa agccgacgcg
     8881 ccagatcgta gttgctggtg cccacgaacc aggattcctg ttgcagacgc ttaacgatgg
     8941 tttcttgtac ttcgcgagaa aaacggcgac gggtgccaaa atccatcaga tggaagcgcg
     9001 acatatcaag accggcggtt aacgccgaga agtcgactaa tttgctttcc agcgtgtcga
     9061 gggcttgcgc aacgtcggcc tgcggtgagc gatagcgatg taccatttca ctgataaccg
     9121 ccagcaaagg aacttcccag aggatgactt cacgccacgg accgcttaag cgaatatcca
     9181 gcttgccatt atcgttggac acggtgactt gttccgggtt aaagcggaat tcgcgtaacc
     9241 agttaagata gtcggcctta aagaaaggca gggcagagag ccactgatat tcatcatcct
     9301 gcaggcgcag gtgctgcatc gcctgaatct gttcacgaat agcatcggca taaataccca
     9361 gcagatcgtc acctcggcaa cgaaactccg ccgcgacatg cacatcgtaa tagtgatgaa
     9421 acacggcttg ctgcatatgc aacttataag catctgtatc cagcaacgag tgcagaacag
     9481 gagaagcgaa ttgtgtcata ggtgcgcagt agcatcctcg tacaggagcg tttagtacaa
     9541 taaacatctt caggaactgc tggagtatac cttgtttcgc aatttattga accccgatca
     9601 caccatatgc cacctttctg gtcgatggca ttacgcggtg tatgttataa aaatgtagca
     9661 ataaaggcgt ttgtacctga aaagatgaag attctgcata gcgcgattta cgcaacagga
     9721 atagactgaa caccagactc tataaaagat gctaaaggtt atttatgact caacagccac
     9781 aagccaaata ccgtcacgat tatcgtgcgc cggattacca gattactgat attgacttga
     9841 cctttgacct cgacgcgcaa aagacggtcg ttaccgcggt cagccaggct gtccgtcatg
     9901 gtgcatcaga tgctccgctt cgtctcaacg gcgaagacct caaactggtt tctgttcata
     9961 ttaatgatga gccgtggacc gcctggaaag aagaagaggg cgcactggtc atcagtaatt
    10021 tgccggagca ttttacgctt aagatcgtta atgaaataag cccggcggcg aataccgcgc
    10081 tggaagggct ttatcagtca ggcgatgcgc tttgcaccca gtgtgaagcc gaaggtttcc
    10141 gccatattac gtattatctc gaccgcccgg acgtgctggc gcgttttacc accaaaatta
    10201 ttgccgataa aaccaaatat cccttcctgc tttccaacgg taaccgcgtt gcgcaaggtg
    10261 aactggaaaa cggacgccat tgggtacagt ggcaggaccc gttcccgaaa ccgtgctacc
    10321 tgtttgcgct ggtggcaggc gactttgatg tactgcgcga cacctttacc acgcgttctg
    10381 gtcgcgaagt ggcgctggag ctgtacgtcg atcgcggcaa ccttgatcgc gcgccgtggg
    10441 cgatgacctc gctgaaaaac tcaatgaaat gggatgaaga acgcttcggc ctggagtatg
    10501 acctcgacat ctatatgatc gtcgcggtgg atttcttcaa tatgggcgca atggagaata
    10561 agggtttgaa tatctttaac tccaaatatg tgctggcccg caccgacacc gccactgaca
    10621 aagattacct cgatattgaa cgcgttatcg gccatgaata tttccataac tggaccggta
    10681 accgagtcac ctgccgcgac tggttccagc tcagcctgaa agaaggttta accgtcttcc
    10741 gcgatcagga attcagctct gaccttggtt cccgtgcagt taaccgcatc aataatgtgc
    10801 gcaccatgcg cggattgcag tttgcggaag acgccagccc gatggcgcac ccgatccgcc
    10861 cggacatggt cattgagatg aacaacttct ataccctgac cgtttacgag aagggcgcgg
    10921 aagtgatccg tatgatccac accctgctgg gcgaagaaaa cttccagaaa gggatgcaac
    10981 tctatttcga gcgccatgat ggcagcgcgg caacctgcga cgactttgtg caggcgatgg
    11041 aagatgcgtc gaatgtcgat ctctcccatt tccgccgttg gtacagccag tccggcacgc
    11101 cgattgtgac cgtcaaagac gactacaatc cggaaaccga gcagtacacc ctgaccatca
    11161 gccagcgcac gccagccacg ccggatcagg cagaaaaaca gccgctgcat attccgtttg
    11221 ccatcgaatt gtatgacaac gaaggcaaag tgatctcgtt gcagaaaggc ggtcatccgg
    11281 tgaattccgt gctgaacgtc acccaggcgg aacagacctt tgtttttgat aatgtctact
    11341 tccagccggt gcctgcgctg ctgtgcgaat tctctgcgcc agtgaaactg gaatataagt
    11401 ggagcgatca gcaactgacc ttcctgatgc gtcatgcgcg taatgatttc tcccgctggg
    11461 atgcggcaca aagcctgctg gcaacctaca tcaagctgaa cgtcgcccga catcagcaag
    11521 ggcagccgct gtctctgccg gtacatgtgg ctgacgcttt ccgcgcagtg ctgctcgatg
    11581 agaagattga tccggcgctg gcggcagaaa tcctgacgct gccttctgtc aatgaaatgg
    11641 ctgaactgtt cgatatcatc gacccgattg ctattgccga agtacgcgaa gcactcactc
    11701 gtactctggc gactgaactg gcggatgagc tgctggctat ttacaacgcg aattaccaga
    11761 gcgagtaccg tgttgagcat gaagatattg cgaaacgcac tctgcgtaat gcctgcctgc
    11821 gcttccttgc ttttggtgaa acgcatctgg ctgacgtgct ggtgagcaag cagttccacg
    11881 aagcgaacaa tatgaccgat gcgctggcgg cgctttctgc ggcggttgcc gcacagctgc
    11941 catgccgtga tgcgctgatg caggaatacg acgataagtg gcatcaggac ggtctggtga
    12001 tggataaatg gtttatcctg caagccacca gcccggcggc gaatgtgctg gagacggtgc
    12061 gcggtctgtt gcagcatcgc tcatttacca tgagcaaccc gaaccgtatt cgttcgttga
    12121 ttggcgcgtt tgcgggcagc aatccggcag cgttccatgc cgaagatggg agtggttacc
    12181 agttcctggt ggaaatgctt accgacctca acagccgtaa cccgcaggtg gcttcacgtc
    12241 tgattgaacc gctgattcgc ctgaaacgtt atgatgccaa acgtcaggag aaaatgcgcg
    12301 cggcgctgga acagttgaaa gggctggaaa atctctctgg cgatctgtac gagaagatca
    12361 ccaaagcact ggcttgataa ataaccgaat ggcggcaata gcgccgccat tcggggaatt
    12421 tacccctgtt ttctcaggcg aatttcagat tcaccacgct gcatcaccct ttgcaacact
    12481 tccgattcca gctccgctaa tcgcaccgac cctaatcgac gcggaggggg gatatccact
    12541 gtcaaatcca gaccaatttt tccctcttca attaataaca cccggtcagc cattgctacc
    12601 gcttcgctca catcatgcgt caccaacagt acggtaaagc cgtgctcctg ccaaagtgac
    12661 acaatcaaat cctgcatctc gagtcgcgtt aaggcgtcca gtgccccgag cggttcatca
    12721 agcaacaata aacccggtcg atgaatcaac gctcttgcca gcaccactcg ctgtttctgc
    12781 ccgcctgaaa gtgcggcagg ccattccccg gcgcgattct ccagtcctac cgcagccaac
    12841 gcccgacgcg cggcatcgcg ccactggcct ttaaggccta acccaacgtt atcaatcacc
    12901 gatttccacg gtagcagacg cgcatcctga aacatcattc gcgtgtcttc ctgaatttca
    12961 gccagcggtg tggtgcctgc caacacatcg cctgcggttg gcgtttccag cccggccagc
    13021 aggcgcagca gggtactttt gccaccaccg ccacaaactg acctgccgga atatgtaaat
    13081 ccagttggtt caggacgata ttttccgcgt aatgtttgct tactgcattg agcaacaatg
    13141 gtgtgccctg gttcagacga gcagtattca taccgtggcc tccttcaaat gataagccgg
    13201 gttccagcgc aaccagaggc gctctaacag ctgcgcgctg acgtcagcaa gtttgccgag
    13261 cagggcgtaa agaataatag cgactaccac cacgtccgtt tgcaaaaact ctcgcgcatt
    13321 catcgccaga taaccaatgc cggaattggc agaaatggtt tcggcaacaa tcagcgtcag
    13381 ccacatcagg cccaacgcaa aacgcacgcc gaccataatt gagggcaggg caccaggcag
    13441 gatcacatgg ataaacagcg gtatgccgga taatccatag ctacgcgcca tctccaccag
    13501 cccgcgatcg atattacgga tgccatgcca ggtgttgata taaatgggaa acagcgtacc
    13561 gagcgccacc agaaagattt ttgcggattc atcaatgcca aaccacaaaa tcaccagcgg
    13621 gatcagcgcc agatgcggca cgttgcgcaa catctgaatt gaggtatcca gcagccgttc
    13681 tccccagcga gatagcccgc taatcagtcc caaaatcaac cccagcgatc cgccaattga
    13741 aaagccaatc agcgcccgct aggaactgat cgccagatgc tgccacagtt cgccgctggc
    13801 ggagagcgtc cagaacgccg tcaccacccc ttccggtgag ggcaaaatac gcgtcgacag
    13861 ccagccaact gaggaggcca gttgccacac cgccacgatg cccaccggta aaaactaggg
    13921 ggcaacgcgc aataaccact tcttcactgg cgttgccatt atttcttcct tagctttgcg
    13981 cgactttacg ggggataaaa tcattcgcca ccgcttcgcc ttgcggattc agcggctgcg
    14041 gctggggaat ttccggaatg gcgacatcca gatgtgggaa cagcaactcg ccgacccgat
    14101 acgcttcttc cagatgcgga tagcccgaaa gcacaaagct gtcgatgcca agcgcggcgt
    14161 attcgttgat tcgcgcagcg accgtaggac catcgcccac cagcgccgtt ccggcaccgc
    14221 cgcgcactaa gccaacgccc gcccataaat tggggctgat ctccagattg tcgcgcttgc
    14281 cgttatgtaa cgccgccatt cgctgttgtc ctacggaatc cgtccgggcg aatgcggcct
    14341 gtgctttggc gatagtttca tcatcaagat gcgagattaa ccgctcggcg gcctgccacg
    14401 cttcgtcgtt agtttcacga acaatcacat gcagacgaat accgaaacga attttgcgtc
    14461 catgcgcggc agctttcgcc cgcacttgtt cgatcttctc ttttactagt tctggcggtt
    14521 cgccccaggt gaggtagaga tcaacttgtt ctgccgccag ctcctgggcg acgtctgacg
    14581 atccgccaaa gtaaagcgga ggataaggct gttgaatcgg cgggaagagc agttttgctc
    14641 cgcgcacatg aatatgttta ccgttgaaat tgacggtttc ccccagcaat aagcgccgcc
    14701 agacctaggt aaattccgcc gaggcttcgt agcgctcgct atgatcaagg aacacgccgt
    14761 cgcctgccag ctcttgtgga tcgctgcctg tgaccagatt aaacaacgca cgaccatttg
    14821 agagacggtc aagcgtggcg gcctggcgag cggcaacggt aggtgaggtt acgctggggc
    14881 gcagggcgac aagaaacttc agccgctgcg tcaccgggat catcgacgcc gccaccagcc
    14941 acgcatcttc acacgatcgc cccgttggga tcagcacacc ggtatagccc agacgatccg
    15001 ccgcttgcgc aatttgttgc agataaccgt gatcaaccgg gcgtgaacct tcttccgttc
    15061 ccagatagtg cccgtcaccg tgggtcggta aaaaccagaa catattcaga ctcataattg
    15121 ttttccttcc agttgagtgg gctgccagat gcgctggcga atatcgactt ttttcggcac
    15181 cagacgattt tcataaaaca gatctgccgt ttgctgctgt aaggcggcaa cctcggcgtt
    15241 aaccggtttg atggtggtag gagggcgatg atctaagtaa gaggcaatca ccggtgccgg
    15301 taagcccatc gtttttgcca gtaaagcgat gctttgctcg cgctggctgc gggttaacgc
    15361 atcggcctca ctaaaggttg ccagtacgcc ctgaataaaa gcgccgtttt tttctgcata
    15421 gggacgagct gccagataaa acgatccagt ttgattgaga tcggtgccgt ctttcagcac
    15481 ccgcacgccg ccctgtaata atgcagcaga gtagtaggga tcccagatag cccaggcgtc
    15541 aacgttacct tgctggaacg cggcgcgggc atcagcgggc gtcaggtaag tgggttggat
    15601 atcggtaaac ttaagtccgg cctgacgcag tgcacgcagt aaaaggttgt gtgaactgga
    15661 acctttctga aaggcaactt tgtgaccttt aagatcggct acggttttga tcgggctgtt
    15721 ttctgccacc agaatcactt cggctttggg cttcggtggc tcgacgccca catataccaa
    15781 atcagccccg gcagcctggg caaagattgg cggaatatcc ccggtactgc cgagatcaat
    15841 actgccaacg tttaaggctt ccaacatttg cggacccgcg gggaactcca cccaggagat
    15901 ttttgattgc ggatagcgtt tttccagtaa ctggtggctt tttgccagta ccataccaat
    15961 actgcctttc tgatagccta tacataacgc ttcaggcgag gattctgcag caaccgcaat
    16021 cgtagagacg ctaagcaatc ccaccagcgc cagtttaatg atgttacgca tgggcattac
    16081 ctcgcagaga cagaaggtca ggaacctgaa catcgcggcg gtgcaatgcc tgccagaaag
    16141 tttctagcgc ggtatcaaga cgggtttgca gatttggcgt gaactggggt ctgtgatggt
    16201 aatcaattac ttgtgagtca tcggcaaaca cgccgtgcag gatctcctga gctttcagtg
    16261 cgcttaaaac tggtttaagg gcataatcga ccgccagcag atgggccacg gtaccgcccg
    16321 tcgccagcgg tagcaccact ttgccttgca aagcgcgctc tggcagcagg tcgagcaggg
    16381 ttttcagcgc gccggaatag gcggctttat acacaggtgt agcgactatc agtccatcag
    16441 cctgttgcag ctgttcggtg aaggtcttga gtgccggact atcgaaacga gcataaagca
    16501 gatcttccgg gacgaagttt tgcagattcc agtgataaac ctctacatcc aggccattta
    16561 gtttttcccg cgcatattcc agcaaggagc tggagcgaga aggaaagcga ggactacccg
    16621 ccagggtgat gacacgcata ctctctcctt ataaccaatt gttctttttt tgttaacatt
    16681 gataacaatt cggtcagtct gtcggagaga caagaaaatg ccaaatataa attttgtgta
    16741 tctttttctg aaaataaact aaagaaaggg ctttatatat cacgcatatt tatttgttgg
    16801 atagtcatta gatgttgaat caatgaatta ctcgttcagt taatatttaa atattcatga
    16861 aatctataaa ttaaagattt gtcacttatt ggatttagta tgcttgattt aaatgacggt
    16921 caattattgt tattattaag tctaatgtca tttaaaggca ttatcatatt tacgaagaga
    16981 tcaggatgat gacgatgaaa aaaagtgtat tgacggcgtt tataactgtg gtatgtgcaa
    17041 cgtccagcgt tatggcagct gatgataatg ctatcacgga tggcaaagta acatttaatg
    17101 gtaaagttat tgctccagct tgtaccctgg tagctgcgac gaaagattca gtagtcacat
    17161 tgccaaatgt cagcgccacc aagttgcaaa ctaatggagc agtctctggc gttaaaactg
    17221 atgtaccaat tgccttagaa ggctgtgatg ttactgtaac taaaaatgcg acgtttacct
    17281 ttagtggtac ggctgacggc gtgcaaccta cagcatttgc caaccaggct accaccgatg
    17341 cag
//
LOCUS       DADMIB010000088        17104 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.088, whole genome shotgun sequence.
ACCESSION   DADMIB010000088 DADMIB010000000
VERSION     DADMIB010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17104
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.088"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..303)
                     /gene="hlyE"
                     /locus_tag="JNZ89_002641"
     CDS             complement(<1..303)
                     /gene="hlyE"
                     /locus_tag="JNZ89_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin HlyE"
                     /protein_id="HAY8936471.1"
                     /translation="MTEIVADKMVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETI
                     KELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLF"
     gene            676..1095
                     /gene="umuD"
                     /locus_tag="JNZ89_002642"
     CDS             676..1095
                     /gene="umuD"
                     /locus_tag="JNZ89_002642"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HAY8936472.1"
                     /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL
                     IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR
                     PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR"
     gene            1095..2362
                     /locus_tag="JNZ89_002643"
                     /pseudo
     CDS             1095..2362
                     /locus_tag="JNZ89_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415702.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
     gene            complement(2408..2938)
                     /gene="dsbB"
                     /locus_tag="JNZ89_002644"
     CDS             complement(2408..2938)
                     /gene="dsbB"
                     /locus_tag="JNZ89_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HAY8936473.1"
                     /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC
                     IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA
                     TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV
                     MISQPFKAKKRDLFGR"
     gene            complement(3084..4625)
                     /gene="nhaB"
                     /locus_tag="JNZ89_002645"
     CDS             complement(3084..4625)
                     /gene="nhaB"
                     /locus_tag="JNZ89_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter NhaB"
                     /protein_id="HAY8936474.1"
                     /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG
                     WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM
                     VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG
                     FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM
                     VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV
                     REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL
                     TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF
                     YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN
                     GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG
                     WIATL"
     gene            4847..5566
                     /gene="fadR"
                     /locus_tag="JNZ89_002646"
     CDS             4847..5566
                     /gene="fadR"
                     /locus_tag="JNZ89_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HAY8936475.1"
                     /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
                     RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
                     SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI
                     YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE
                     SGEIWHRMQKNLPGDLAIQGR"
     gene            complement(5618..7150)
                     /locus_tag="JNZ89_002647"
     CDS             complement(5618..7150)
                     /locus_tag="JNZ89_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HAY8936476.1"
                     /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY
                     PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
                     CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
                     EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
                     TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK
                     QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
                     YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
                     VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR
                     GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSVELLERCPPRMG
                     NL"
     gene            7480..8778
                     /locus_tag="JNZ89_002648"
     CDS             7480..8778
                     /locus_tag="JNZ89_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HAY8936477.1"
                     /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA
                     GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM
                     ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA
                     GVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF
                     RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYS
                     LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV
                     VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ
                     LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS"
     gene            8846..9847
                     /gene="dadX"
                     /locus_tag="JNZ89_002649"
     CDS             8846..9847
                     /gene="dadX"
                     /locus_tag="JNZ89_002649"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005005651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolic alanine racemase DadX"
                     /protein_id="HAY8936478.1"
                     /translation="MSARPRRTRVVKANAYGHGIERIWSALGATDGFALLNLEEAITL
                     RERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVN
                     SGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARIEQAAEGL
                     ECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEIIG
                     VQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTV
                     SMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV"
     gene            complement(10234..11970)
                     /locus_tag="JNZ89_002650"
     CDS             complement(10234..11970)
                     /locus_tag="JNZ89_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HAY8936479.1"
                     /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
                     AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
                     TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
                     NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIAL
                     PAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
                     LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV
                     FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV
                     VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN
                     QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYA
                     DVALIYGLEDGREYRDKQQTLGEIVQQLLGTAPVVGDQVEFAGMIWTVAEKEDNEVLK
                     IGVRVAEEEAES"
     gene            complement(12065..12979)
                     /gene="ldcA"
                     /locus_tag="JNZ89_002651"
     CDS             complement(12065..12979)
                     /gene="ldcA"
                     /locus_tag="JNZ89_002651"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HAY8936480.1"
                     /translation="MSLFHLIAPSGYSIKQHAALRGIQRLTDAGHQVNNVEVIARRCE
                     RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLI
                     CGHSDFTAIQCGLLAQGNVITFSGPMLVANFGADELNAFTEHHFWLALRNKTFTIEWQ
                     GEGPTCQTEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH
                     AGILPRQKAIILGSFSGSTPNDYDAGYNLESVSAFLRSRLSIPLITGLDFGHEQRTVT
                     LPLGAHAILNNTREGTQLTISGHPVLKM"
     gene            13079..13690
                     /gene="emtA"
                     /locus_tag="JNZ89_002652"
     CDS             13079..13690
                     /gene="emtA"
                     /locus_tag="JNZ89_002652"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309714.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     EmtA"
                     /protein_id="HAY8936481.1"
                     /translation="MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQ
                     KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP
                     TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
                     RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM"
     gene            complement(13692..14426)
                     /locus_tag="JNZ89_002653"
     CDS             complement(13692..14426)
                     /locus_tag="JNZ89_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein"
                     /protein_id="HAY8936482.1"
                     /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
                     AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
                     VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
                     AELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSP
                     TVERQLQRIIFSLEREAREKADKVRD"
     gene            14627..14881
                     /locus_tag="JNZ89_002654"
     CDS             14627..14881
                     /locus_tag="JNZ89_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HAY8936483.1"
                     /translation="MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFQTCILGIVGAVVGG
                     WLATMFGIGGSISGFNLHSFLVAVVGAILVLGLFRLLRRE"
     gene            15060..15500
                     /locus_tag="JNZ89_002655"
     CDS             15060..15500
                     /locus_tag="JNZ89_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936484.1"
                     /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN
                     TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALY
                     RQRRCKSPGDDSETLTRRNDAIFGNHVWQTFAQYFPPGLEKPAV"
     gene            complement(15579..16924)
                     /gene="treA"
                     /locus_tag="JNZ89_002656"
                     /pseudo
     CDS             complement(15579..16924)
                     /gene="treA"
                     /locus_tag="JNZ89_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001420363.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreA"
BASE COUNT         4311 a         4224 c         4422 g         4147 t
ORIGIN      
        1 aaatagcaaa atatacgctg cgagcaattg cgtcgcaaca ccacaccatt catacactgt
       61 ttgggttgct tcaaaatact tatcctggct atccataagt aaggttttaa tatcgccgac
      121 taaaacggag gctgcctgtg aatactcctg tttaaagcga cttaactctt ttatggtttc
      181 atcaaaggtc tgccagggga tgacctgatc gagatattta ttataaagat ctaatgctcc
      241 atctgcggtt tcgattgcgt ttttaactac ttctaccatt ttatctgcaa cgatttcagt
      301 cataatcatt cgcctcttta aatatataaa ttgtaatgaa actcctgttt tacaactatt
      361 aataaatttt acttcatcta attcatagtt agccgggtgg gatgcgtcaa tgtctttatt
      421 tctattaata tgataaatat caaacaatgt ttaatgtcat tatggcgaat gcttctattc
      481 tatttttttg ccgggtgata tttttcattt ctgctggatg agcgtcgtcg ccagaaggcc
      541 acgtgagcac aggataagag aacgaaaaat cagcagtcta tacagcgaca aatattgata
      601 gcctgaatca gtattgatct gctggcaaga atagactact gtatataaaa acagtataac
      661 ttcaggcaga ttattatgtt gtttatcaag cctgcggatc tccgcgaaat tgtgactttt
      721 ccgctattta gcgatcttgt tcagtgtggc tttccttcac cggcagcaga ttacgtcgaa
      781 cagcgcatcg atctgaatca actgttgatc cagcatccca gcgcgactta cttcgtcaaa
      841 gcaagtggtg attctatgat tgatggtgga attagtgacg gtgatttact gattgtcgat
      901 agcgctatta ccgccagcca tggtgatatt gtcatcgctg ctgttgacgg cgagtttacg
      961 gtgaaaaaat tgcaactacg cccgacggta cagcttattc ccatgaacag tgcgtactcg
     1021 cccattacca tcagtagcga agatacgctg gatgtctttg gtgtggtgat ccacgtcgtt
     1081 aaggcgatgc gctgatgttt gctctctgtg atgtaaacgc gttttatgcc agctgtgaga
     1141 cggtgtttcg ccctgattta tggggtaaac cggtggttgt actatcgaat aatgacggtt
     1201 gcgttatcgc ccgaaacgct gaggcaaagg cgctgggtgt taaaatgggc gatccctggt
     1261 tcaaacaaaa agatctgttt cgtcgctgtg gtgtggtttg ctttagcagc aattatgagc
     1321 tttacgcaga catgagcaat cgggtgatgt cgacgctgga agaactatcg ccccgcgtcg
     1381 agatttacag tattgatgag gcattctgcg atctgacagg tgtgcgtaat tgtcgcgatc
     1441 tgactgattt tggcagagaa attcgcgcaa cggtgctaca acgtacccat cttactgttg
     1501 gtgtggggat cgcccagacc aaaacgctgg ctaagcttgc caatcatgcg gcaaaaaaat
     1561 ggcagcggca gacggggggg tggtggattt atcaaatctg gaacgccagc gtaaattaat
     1621 gtctgctctc cccgtggatg acgtctgggg gattggacgg cggatcagca aaaaactgga
     1681 cgcgatgggg atcaaaaccg ttcttgattt ggcggataca gatatccggt ttatccgtaa
     1741 acattttaat gtcgtgctcg aaagaacggt gcgtgaactg cgcggtgaac cctgtttgca
     1801 actggaagaa tttgcaccga caaagcagga aattatctgt tcccgctcgt ttggtgaacg
     1861 tatcacggat tatacgtcga tgcggcaggc catttgtagt tacgctgccc gggcggcgga
     1921 aaaacttcgc agtgagcatc aatattgtcg gtttatctcc acatttatta agacgtcacc
     1981 atttgcgctc aatgaacctt attacggcaa tagcgcgtcg gtaaaactgc tgacgcccac
     2041 tcaggacagc agggatatca ttaacgccgc tacgcgatct ctggatgcca tctggcaagc
     2101 gggccatcgc taccaaaaag cgggcgtgat gctgggggat ttcttcagtc agggagtcgc
     2161 gcagctcaat ttattcgatg acaacgcacc gcgccccggg agtgagcaat tgatgacggt
     2221 aatggataca ctgaatgcta aagagggcag aggaacactc tattttgccg ggcaggggat
     2281 ccaacaacaa tggcagatga agcgagccat gctttcacca cgttatacaa cgcgaagttc
     2341 tgatttactg cgggtcaaat aaatatagcg gcaggaaaaa agtgctcccg caggagcgcc
     2401 gaatggatta gcgaccgaac agatcacgtt ttttcgcttt aaacggctgg gaaatcatca
     2461 ccagcaccgc gacaatcagg taagcgataa aaataccgag cagccactgc ggcatttcca
     2521 gacctaaaaa atcccactga cgctcggcgc aatcgccaga ggcgacaaac acttgcggca
     2581 cccatttatc cagcggcagc cattccggga aacgaaccat aaaatcacag gtggcaaacg
     2641 gcgaaggata gagctgaagc atggtgtgct cgtaagttaa ctgcacaccg cggaacgcac
     2701 tatacaacca gataaccatc gctacataac gcagcggagt tttcggggcg atcgcgccaa
     2761 tcagcgcagc acccagaacg ccgaataacg cgcagcgttc ataaatacag agcacgcaag
     2821 gtttcagtaa catcacatgc tggaaccaca gcgccgtcag ttccagtgcc agagcagtaa
     2881 acgccatcaa cagccacgcg ccccggcctt gtgaacattg gttcaaaaat cgcaacataa
     2941 tcatttccct gcaatatgca tagagtgcgc agtttaaacc aattcattcg ctgcgccacc
     3001 aggaggcagc aaaaatagga cgcaattgga caattatcgg gcgaaaaggc aaaccgggca
     3061 tttatatgcc cggtaagttg ttatcaaagc gttgctatcc agcccatttg cataaaccat
     3121 tcggttacag gggcaagcgt aaactcgacg cagagcagcc cgacgagtgt caggacgagg
     3181 gtgtaaggca gggccatcca caccatgcgg ccataagaga ggcgaatcaa tggcgcgagt
     3241 gcagaggtca gcaggaacag gaacgcagcc tgaccgttcg gcgtagcgac agagggcaga
     3301 ttggtaccgg tattaatggc gaccgccagc agctcgtatt gcttcaacgt gatagcgcca
     3361 ctttccattg ccgctttcgc ttcgttgata taaatcgtcc ccacgaagac gttatccgaa
     3421 atggatgaca gcagaccgtt gaaaatatag aacaacgaca gctgagcatg ttccgatgcc
     3481 tgcaacacaa actgaataat cggcgaaaac agttgttggt cgataatcac cgcgactacc
     3541 gagaaaaaca ccgtcaacag tgcggtgaat ggcagagatt cggtgaaggc tttaccgata
     3601 gcatgttcat cggtgacacc ggtcaatgat gtcgccagaa taatgaccga caaaccaatc
     3661 aagccaacct ccgccagatg caacgccagc gcagtcacca gccagacgcc gataatcgcc
     3721 tggacaatca gacggatttt atcctgacgg gtacgctggt ggcggctttg atcgtcaaac
     3781 tgttgcaaca cttcgcggac tttctccggc agcgtttcac cgtagccaaa ccaacgcagc
     3841 ttctctacca gcaggcaggt taacaggcca caaatcagaa ccggaacggt caccggcgac
     3901 atgcgcagga agaaatcgcc aaaatgccag ccagccgctt tagcgatgat caggttctgt
     3961 ggttcgccca ccatggtcat tacgccgcct aatgcggtgc cgacaccggc atgcatcatc
     4021 aggctacgca gaaagccacg gaactgttcc agaaccactt tgtaatgctt gtcgatatga
     4081 ctatcgtctt gcaggtcggt atcttcagta cgggaagagg ctacgcggtg ataaatacca
     4141 taaaaaccga ctgcaacgct gatcaccacc gccacgacgg ttaaggcatc gaggaacgcg
     4201 gagaggaacg ccgccgccac gcaaaaagag agcgacagca gcattttgga acgaatgctt
     4261 aacagcaaac gggtaaatat gaacagcaat agctgtttca taaaatagat acccgccacc
     4321 ataaacatca gtaacagcaa gacttcaaga tttgccgcca cctcttcacg gacgtgttcc
     4381 gcgctggtca tgccgatgaa taccgcttca atagccaaca gaccaccggg gagtagcggg
     4441 tagcatttca gggccatcgc cagagtgaaa ataaattccg ctaccagcaa ccagccagcg
     4501 acgaaagggc tgatgaggaa aattaacgga tttacgatta agaaaatgat gagggcgagt
     4561 ttgtaccagt cgggggactg gcccaaaaaa ttgcgccata gcgcgcggcc ccaggagatc
     4621 tccatgatgg tttcccttac cttacaaata atcaatgatg tttttatgtt taaacgcaaa
     4681 gcttaacggt caggcaggag tgaggcaagt cttgatagtc aaggggaaag agatgcggaa
     4741 aatgaagcct tgatcccttt tttcttcttt ttgtctgcta tcagcgtagt tagccctctg
     4801 gtatgatgag tccaactttg ttttgctgtg ttatggaaat ctcactatgg tcattaaggc
     4861 gcaaagcccg gcgggtttcg cggaagagta cattattgaa agtatctgga ataaccgctt
     4921 ccctcccggg actattttgc ccgcagaacg tgaactttca gaattaattg gcgtaacgcg
     4981 tactacgtta cgtgaagtgt tacagcgtct ggcacgagat ggctggttga ccattcaaca
     5041 tggcaagccg acgaaggtga ataatttctg ggaaacctct ggtttaaata tccttgaaac
     5101 actggcgcga ctggatcacg aaagtgtgcc gcagcttatt gataatttgc tgtcggtgcg
     5161 taccaatatt tccactattt ttattcgcac cgcgtttcgt cagcatcccg ataaagcgca
     5221 ggaagtgctg gctaccgcta atgaagtggc cgatcacgcc gatgcctttg ccgagctgga
     5281 ttacaacata ttccgcggcc tggcgtttgc ttccggcaac ccgatttacg gtctgatcct
     5341 taacgggatg aaagggctgt atacgcgcat tggtcgtcac tatttcgcca atccggaagc
     5401 gcgcagtctg gcgctgggct tctaccacaa actgtcggcg ttgtgcagtg aaggcgcgca
     5461 cgatcaggtg tacgaaacag tgcgtcgcta tgggcatgag agtggcgaga tttggcaccg
     5521 gatgcagaaa aatctgccgg gtgatttagc cattcagggg cgataatccc ttccgtttaa
     5581 aaagcaaacc cctcaaacga ggggtttttt gttgttttta cagatttccc attcttggcg
     5641 ggcaacgttc cagcaactcg acgctgccat cttcgttttg ctgttccagc atcacatcaa
     5701 atccccacag gcgatgcaca tgcttcagca cttctttgcg cccccgatcc agcggtgcgc
     5761 gattatgtgg aatgtaacgc agcgtcagcg aacggtcgcc gcgcaaatcc acgttccaga
     5821 tctgaatatt cggctccaga ttacttaagt tatattgcga cgataaccgg ttacggatct
     5881 cccgataacc ttcttcatta tgaatagcgg aaatctccag ataattatgc cgatcgtcat
     5941 ccagcacggt gaagaagcgg aaatcacgca tcactttcgg tgacagaaac tggctgataa
     6001 aactctcatc tttgaaatca cgcatcgcga aatgcagcgt ttccagccag tcggaaccgg
     6061 cgatatccgg gaaccagtat ttgtcttctt ccgttggcga ctgacaaatc cgtttaatat
     6121 cctggaacat ggcgaacccg agggcatacg ggttgatgcc gctgtaccac gggctgttat
     6181 aggggggctg gaagaccaca ttggtgtggc tgtgcaaaaa ctccagcata aaacgttccg
     6241 ttactttccc ttcatcatac agatggttaa ggatggtgta gtgccagaag gtggcccagc
     6301 cttcgttcat cacctgagtc tgtttttgcg gataaaaata ctggctcacc ttacgcacaa
     6361 tacgcaggat ttcacgctgc catgattcca gcagtggcgc atttttctcc ataaaataga
     6421 gcaggttttc ttgtggttcg gacggatagc ggcgcgcttc agcaaccgtt ttctcttcct
     6481 cgcgcttcgg cagggtacgc cagagcatat tgacctgact ttgtagatac tcttcgcgac
     6541 ttttctgccg ggctttctct tcttgcagcg agattttttg cgggcgtttg taccggtcca
     6601 cgccgtagtt catcagcgcg tggcacgagt ccagaagccg ttctacttca tccacgccat
     6661 aacgttcttc gcactcggta atatatttac gggcaaaaat cagataatcg acaatcgaac
     6721 tggcgtcggt ccaactgcgg aataagtaat tgtttttaaa gaaagagtta tgcccatagc
     6781 aggcgtgtgc catcaccagc gcttgcatgg taatggtgtt ctcttccatc aggtaagcga
     6841 tacacgggtt agagttaatg acgatttcat aggccagtcc ttgctgaccg tgcttataca
     6901 gccgttcagt ctcgataaac tttttaccga atgaccagtg cggatagtta attggcatgc
     6961 cgacgctgga gtaggcatcc atcatctgtt ctgaggttat cacttcaatc tggtgcgggt
     7021 aggtatccag ccggtagagt ttcgccaccc ggtctatctc tgccagataa acatccagca
     7081 ggtcgaacgt ccagtcgggt ccatcgctca accgtgtggt gtccttattc atagaatcga
     7141 tcgtcgccat acgcgcacct cattgttgtc ggcgctctct gtgtggagca cctcatttca
     7201 agcatagaac acctgttaaa aaccgcgtcg ccggagaatt tttttctttg cgatttctta
     7261 ttatcagagt gccactaatc cgcttctgaa cggaatttta tgctggataa aaagggcgtt
     7321 cagcaggaga tactaaagac gccatattgc cgcagagtca gggagatgtg agccagctca
     7381 ccataaaaaa gctgtatgtt gaataatatt ttcaactgag ttatcaagat gtaattagat
     7441 tattattctt ttactgtatc taccgttatc ggagtggcta tgcgagttgt catactggga
     7501 agtggtgtgg taggcgttgc cagcgcctgg tacttaaatc aggcaggaca tgaggtcacc
     7561 gtcattgatc gggagccggg ggccgccctg gaaaccagcg ccgcgaatgc cgggcaaatc
     7621 tcccccggat atgctgcacc gtgggcggca ccaggtgtgc ctttaaaagc gatcaaatgg
     7681 atgttccagc gccatgcgcc gctggcggtt cgtctcgacg gtacgcagtt tcagttgaaa
     7741 tggatgtggc aaatgttacg taactgcgac accagccact acatggaaaa caaagggcgg
     7801 atggtgcgtc tggcggaata cagccgtgat tgcctgaaag cattgcgcgc cgaaaccaat
     7861 attcagtatg aagggcgtca gggtgggacg ctgcaactgt tccgtaccga acaacagtat
     7921 gaaaatgcga cccgcgatat cgccgtgctg gaagatgccg gcgtaccgta tcagctgctg
     7981 gaatccagcc gcctggcgga agtggagcca gcgctggcag aagtagcgca caaactgacg
     8041 ggtggtctgc aactgcccaa tgatgaaacc ggagactgcc agctgtttac ccagaatctg
     8101 gcgcggatgg cagagcaggc gggggttaaa ttccgcttta atacgcccgt tgaccaactg
     8161 ctttgcgacg gcgagcaaat ctacggcgtg aagtgtggcg atgaagtgat taaggccgat
     8221 gcgtatgtga tggcgtttgg ttcttactcg acggcgatgc tcaaaggcat tgttgatatt
     8281 ccggtgtatc cgctgaaagg ctactcgctg actattccaa ttgcgcagga agatggtgcg
     8341 ccagtatcca ccattcttga tgaaacctac aaaatcgcca ttacccgttt cgataaccgc
     8401 attcgtgttg gcggaatggc ggaaattgtt ggttttaaca ccgagctgtt gcaaccgcgt
     8461 cgtgaaacgc tggaaatggt ggttcgcgat ctctatccac gcggcggtca tgtcgagcag
     8521 gcgactttct ggacgggttt gcgcccgatg acgccagacg gtacgccggt tgtcgggcgt
     8581 acacgcttta aaaatctgtg gctgaatacc ggtcacggca cgctcggctg gacgatggct
     8641 tgcggttccg gtcagttgtt aagcgatctg ctctctggtc gcacgccagc gatcccatat
     8701 gaggatctaa gcgtagcgcg ctacagccgt ggatttacgc catcacgtcc gggccattta
     8761 catggcgcac acagctaagg aaacgagatg acccgtccga tacaggccag cctcgatctg
     8821 caggcattaa aacagaatct gtccattgtc cgccaggccg cgccgcacgc gggtggtaaa
     8881 agcgaacgct tacgggcatg gtattgagcg tatctggagc gcgctcgggg ccaccgatgg
     8941 ctttgcatta cttaacctgg aagaggcaat aacgttacgt gagcgcggct ggaaggggcc
     9001 gatcctgatg ctggaaggat ttttccatgc tcaggatctg gagatttatg accagcaccg
     9061 cctgaccacc tgcgtacaca gcaactggca gctcaaagca ctgcaaaatg cgcggctaaa
     9121 agcaccgttg gatatttatc ttaaagtgaa cagtgggatg aatcggttgg gcttccagcc
     9181 cgatcgcgtg cttaccgtct ggcagcagtt gcgggcaatg gcgaatgttg gcgagatgac
     9241 cctgatgtcg cattttgccg aagcggaaca tcctgatgga atttccagcg cgatggcgcg
     9301 tattgagcag gcggcggaag ggctggagtg tcggcgttcg ttgtccaatt cggcggcgac
     9361 tctgtggcac ccggaagcgc attttgactg ggttcggcct ggcattattt tgtatggcgc
     9421 ttcgccgtcc ggtcagtggc gtgatatcgc caataccgga ttacgtccgg tgatgacgct
     9481 aagcagtgag attattggtg tccagacgct aaaagcgggt gagcgtgtgg gctacggcgg
     9541 tcgctatact gcgcgcgatg aacagcgaat cggcattgtc gccgcagggt acgccgacgg
     9601 ttatccgcgc cacgcgccta ccggtacccc tgttttagtg gacggcgtgc gcaccatgac
     9661 ggtggggacc gtctcgatgg atatgctggc ggtcgattta acgccttgcc cgcaggcggg
     9721 tattggtacg ccggttgagc tgtggggcaa ggagatcaaa attgatgatg tcgccgccgc
     9781 tgccggaacg gtgggctatg agttgatgtg cgcgctggcg ctacgcgtcc cggttgtgac
     9841 ggtgtaactt gttgtaagcc ggatcggagg caacgtcttc tgggtgcaaa aaaaatcatc
     9901 catccggctg gtcagcaact gtagttgtta atgtgacaga gccattgccc atgatagtgt
     9961 ccattaaaag gatggacact atttccccgg aacctgaact caccgcacag gcgttctaca
    10021 taaaacgctt acgcttcatt gttgactcgg agtcgacttc agataaatca cgctttaccc
    10081 ttgatggagc ctgtacatag atttgtgtaa ttgcctgatt ttgatatgtt caattcaaca
    10141 tcaaatgaag gttaaattat ggacgacaaa caattgcagg ctcaggctgc gttcagcaaa
    10201 gcatcgcaac cggcgataga tgcttcatta aatttaagat tcagcttcct cttcagccac
    10261 ccgtacgcca atcttcaaca cttcattatc ttctttctcg gccaccgtcc agatcatccc
    10321 ggcaaactct acctggtcac cgacaaccgg tgccgtgcct aacaactgct ggacaatttc
    10381 acccagcgtt tgctgcttat cacgatattc tcgcccgtct tccaggccat atatcagcgc
    10441 aacatcagca tatttggcgc tggcttcgag aatgaagtca ccaaagaagc gttgatccag
    10501 cgcgaccggc ggcgactggc tgaacagttt accgagcgcc ggaagatcgc gttcccgacc
    10561 aattacacac aacacatcgc cttcgcgcag tcgggtgctg ccggtaggat gaagcaactg
    10621 gttatcacga aacagtgccg caatacgcgt ctcttttggc atatgcaaat cgcgcagtgc
    10681 cgcgcccacg caccatttat cggcactcaa ttgataaaca aactgctccc acggattttc
    10741 cggatgaata tccaggccaa cgcgtgacac cggacgtccc actggcggaa ccaccacttt
    10801 ggctttttta gccgcccacg agagtgatgt tccctgcaag agcagtgaaa ccagaaccac
    10861 aaagaaggcg acattaaaga acagacgtgc attctccagc cccgccatca tcgggaacac
    10921 ggccaggatg attggcaccg cgccgcgtaa tcctacccag ctgataaaca cgcgctcacg
    10981 cagattgaaa ccgcggaagg ggagcaatcc agcaaatacc gaaaggggac gggcgaagaa
    11041 tatcatccat gccgacaaaa ttagcgccgg aatggcaata ggcagcagat cgcttgggtt
    11101 aaccaatagc cccagcacca ggaacatggc gatttgcgcc agccaggcga ggccgtcgaa
    11161 attttgcagg atgccgtagc ggttgcgaat cggccgatta cccagcagaa aaccgcacag
    11221 ataaacagcc agaataccgc tgccttccag cgccgtggtt aaagcaaaaa ttaaaatacc
    11281 gccgcttaat gccagcaatg gatataatcc ggcaggcagg gcgatgcgat taatcatttg
    11341 cagcagtaaa taaccaccgc caagtccgat gacaatcccg aggccaaatt gctgcagaat
    11401 atcgaccacg aacatccaac tgacactgct ttcatgttgc tggatcatcg caatcagggt
    11461 aatcgtcaga aagaccgcca ttggatcatt actgccggat tcaatttcca gcgtcgagcc
    11521 aacacgttcg ttaagcccct taccacccag cagagaaaag accgctgcag catcggtaga
    11581 gccgacgata gcgccgatta ataagccttc aatcaaatca agattaaaca gccacgccgc
    11641 catcatgccg gttaaaccag aggtgataag cacgcccagc gtcgccagcg acagtgccgg
    11701 tcctaacgcc acacgaaagg aactggcctg agtgcgcatc ccgccgtcga gcaaaataat
    11761 cgccagtgcc aggttactta ccatgtaggc gaaggggtaa ttatcaaacg ggataccgcc
    11821 gacgccatcg actcctgcca gcatgccgat cgccagaaaa ataaccagaa taggaatgcc
    11881 aagacgggaa gaaaatgaac taagtaatat actgctggtg acaaggatgg atcctaagat
    11941 gaaaaggcta attattgttg tggcatccaa cggtcggtta ctcctgatta cgctgtctct
    12001 tatataaacc ctaccatatt agcggcagag acagcgtttt acttagccct gaagcgtgat
    12061 ttttttacat tttaagaaca ggatgaccgc taatcgtcaa ctgagtgcct tcccgggtgt
    12121 tattcagaat ggcatgtgcg cccaacggca gcgtaaccgt gcgttgttca tgaccaaaat
    12181 cgaggccggt aatgagtgga atcgacaggc gggaacgcaa aaacgcggac actgactcca
    12241 ggttgtaacc tgcgtcataa tcattgggcg tgctgccgct aaagctaccg agaataatcg
    12301 ccttctgacg tggcaaaatt cccgcatgat agagctgcaa cagcatacgt tcgacgcgga
    12361 aagggtgctc gttaatatct tccagtacca ggataccgtt ctcaattttt ggcatccacg
    12421 gtgtaccaat cagtgaaatc agcatcgcaa gattgcctcc ccacaacgtg ccttcggtct
    12481 gacatgtcgg gccttcccct tgccattcaa tggtgaaggt tttattgcgt aacgccagcc
    12541 agaaatggtg ctcggtaaag gcgttcagtt catccgcacc aaagtttgct accagcatgg
    12601 ggccgctaaa ggtgatgaca ttgccttgcg ccagaagacc gcactgaatg gcggtaaaat
    12661 cgctatgtcc gcaaatgagt aacgggtcat gttgttggcg agccaccagt gcctgccagt
    12721 caatatctgc cagtaaacga ctggcaccgt aaccgccgcg tacagccagc acgatggtgt
    12781 tgggtgtagt cagtctggca agggaattga gatcttccag acgctccgtt tccgtacccg
    12841 caaaacgctc acaacgacgg gcaataacct cgacgttatt gacttgatgc cccgcgtcgg
    12901 taaggcgctg gataccacgc agcgcggcgt gctgtttaat gctgtaaccc gatggggcaa
    12961 ttaagtgaaa cagagacatg gcaattcctt gctgacaaca gaaacgaaat gtatatcatg
    13021 ccgcttaggt gtgccgttgt cacctcaacg gcgattccag gctataagga tagaagaagt
    13081 gaaattgaga tggtttgcct ttttgattgt gttattagcg ggttgttcat caaagcatga
    13141 ctatacgaac ccgccgtgga acgcgaaagt tccggtgcaa cgtgcgatgc agtggatgcc
    13201 aataagccag aaagccggtg cagcctgggg cgtcgatcca caattgatca cggcgattat
    13261 cgctatcgaa tcgggtggta atccgaacgc ggtgagtaaa tcgaatgcca ttggtttgat
    13321 gcagttaaaa gcttcaacct ccggacgtga tgtttatcgc cgtatgggct ggagtggtga
    13381 gccgacgacc agcgagctga aaaatccaga gcgtaatatt tcaatggggg cggcttacct
    13441 gaatattctg gaaaccggcc cgctggcagg cattgaagat ccgaaggtac tgcaatatgc
    13501 gctggtggtg tcatacgcta acggggcagg tgcgctgcta cggactttct cgtcagatcg
    13561 gaaaaaggcg atcagcaaaa tcaacgattt ggatgctgac gagttcctcg atcacgtagc
    13621 gcgcaatcat cctgcgccgc aggctccgcg ctatatctac aaacttgagc aggcactgga
    13681 cgcgatgtaa atcagtcgcg tactttgtcc gctttctccc gggcttcccg ctcgagagag
    13741 aaaataatcc gttgtaattg ccgctccacc gtcgggctga cgttaagaaa acggaagctc
    13801 agacggggag tggtgatggt ttcattcttg ccatcaatca ctttgcgctc gctgatggag
    13861 attaactggg cgtcaaagtg aaaaacaccc cattgcccca tgttgacttc aatctgagcg
    13921 aagcgcatgc cttcttgtaa ttcggcaggc tttgctgttt ccagtaatgc gcccatgccg
    13981 cctaacgaca aatcatacag gcggaaacgt aacgtactgt tatccgccag tttggtctgg
    14041 caaaaataag gcggatggag tggggcggag atgcggaaat atcggcgtcg ttgtacaaac
    14101 cataaggtgg gaggcggtac ggtaataaat gccggaagct gcaagtattc actctgctgt
    14161 agttgttcaa cagtaaactc gactttcgca ccctgagttt cggcggtaat ggtaatatgc
    14221 tgcgccttta gcacggcgat gttgtcttcg gcttgactgc cgaaatccag caccagttta
    14281 tccggggtta ttgccagtat tttgctgatc agctgcccgc cattccaact gagacgcaaa
    14341 ggaattgcgg ctttgtgcaa atcgcgtaac acgcccagga cggctaacgg attttgtttc
    14401 aggaactgct catggtaatg actcacgcgg aaaaactcct gactgacaaa ctgtctttgg
    14461 tttatcggtc acagttaaca aaacttaata caaatgcgtg aatatttttt acatgttgtt
    14521 cttaaatcag ccgacatacg cccagcatcg atcccgccct tgcctatact tagagcgttg
    14581 acgtaagcat ttcttgcgtc cgattcatcg aaacgagggc ttgaacatgg gaattattgc
    14641 ctggattatt tttggcctga tagccggcat tatcgccaag ctaatcatgc cggggcgtga
    14701 tggtggtgga tttttccaga cctgtattct cgggatagtc ggtgcggtgg tcggcggctg
    14761 gctggcgacc atgtttggca ttggcggctc catcagcggt tttaatttgc acagcttcct
    14821 ggtggcggtg gtgggagcta ttctcgttct gggcttattc cgcctgctgc gaagagaata
    14881 agattttcat aaggcggata gcgatacaga tgccgctatc cgcttttcac atcagaacgt
    14941 atattcgaca cctgctttac gggtgaaaaa aatcaatata gcacttcgat atccgataaa
    15001 gtcggttccc ggtaacaaca acagaatcct tttttaatta ttgtttcgtt gtttttggtg
    15061 tgattcagaa aataaatatt ttagacagta gccagtcagg cgttaaaaat ggggcggata
    15121 gtgaggcggt tttggctgcg cttattgaac atttagaatt gatcaatcct tctggcagat
    15181 taagccaaaa tacccgttcg gcaatgcttc agttacgcga agaggaatgg tctgaattct
    15241 ttttttggtt gctaaattct ctggagtgtc tggattatgt gattattaat ttaactccag
    15301 aaagcaaaaa aacgttgatg agtgaacacc gtaacaatat tcaggtagca atcgatgctt
    15361 tatataggca acgtcggtgt aaatcaccgg gggatgatag tgaaacactt acccgtagaa
    15421 atgacgctat cttcggcaac cacgtatggc aaacatttgc gcaatacttc ccgccaggac
    15481 ttgaaaaacc ggctgtgtag aaaacaccat agctatggtg ttatctgccg acaacgccat
    15541 ccggagaagc cgaatgacgt tgtcggagta agcgctggtt aaggtgtggg ttgtgcctct
    15601 ttggttgagg gttgcgtcgt tgctgactta acggtcggac gcgtcgccgg aacattgtca
    15661 cacggttgct ctttcgggca gatcaaatcc agcattttca gcgtcacgcc attggtccag
    15721 ccaaagccat cctgtaatgg atattcgcca cctctttttg cccgtagttt tgtaatcctt
    15781 ctgtcgcgac ccactgtaac ggtgcccagc catttggcgc atcccattgt tgcccacttt
    15841 tcaccgacgt ggtgttcagg ccgccgggtt gcagcagatg tgttttcgtc gccgtcgcca
    15901 ttttgttggc gcgatctttc gctgccgcat tgacgtacag cgggaacagg gcggccgcgg
    15961 ttaactgatt gcgcacttta tgacttttca ggtcgtaatc ggcataccag ccttgttgat
    16021 cgttccacag gtatttttcg attccttttt gacgggcatt cgccagcgtt tcgtactggt
    16081 ttgccatcgc gttatctcct gcagctttgc tggcgcgggc gaggattttt tccattttaa
    16141 acatcaggct gttcagatcg accggtacga tgctggtggt gcgtaaggta tttaactgct
    16201 gcgggttgtc catccagcgc gagctgaaat cccagccaga cgcagcggca gagcgcaggt
    16261 cgcggtaaat ttcagtggca ggtcgattcg gattgctttt ggcggtggca atatcttcca
    16321 cccatgactc tggtcgtggc gtatcgcgat cgtcccagta gcggttgaga agggtaccat
    16381 cctgaagttt gacaacgcgt ttttcctgtt gtccggcttg caggttttca acaccgtcca
    16441 tccagtaagc atattctttt tgcatttgcg gcaggtattg cttcaacgcg gcatcgcctt
    16501 catgctgcgc cagtaactct accatcaggg caaagaaggg cggttgcgag cggcttaaat
    16561 agtaactgcg gttgccgttg ggaatatgac cgtaagtgtc tatttcatga gcaaaattgg
    16621 ccaccatatc cgcgacttta tcccagtgac cgctttcagc aagtcctaac atggtgaagt
    16681 aactgtccca gtaatatacc tcgcgaaaac gtccgcccgg cacgacataa ggttccggca
    16741 gcggtaacag agaatcccat ttttcggtgt tttcggtaga acgcgttaat accggccaaa
    16801 gtccgtcaat atgttcgcgc agtgactgcc cctctggcgg aacatatttc tcgccttctt
    16861 tcggcagggt gaaattgacg ttaacgaaat ggcgcagatc aaatccgctc tggttttgct
    16921 gcatccgata atcagcggat cgctgttcgg cacggcatcg gcaaaggttt tttggtccgg
    16981 aaaaagtttg gcgttttgca catcattaaa cagcggccct aataaaatat caggcggcta
    17041 tggtgttacc ggtgtttctt ctgcctgcac cgatagcgca gcgaaacaca aaaagataca
    17101 ggct
//
LOCUS       DADMIB010000089        16921 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.089, whole genome shotgun sequence.
ACCESSION   DADMIB010000089 DADMIB010000000
VERSION     DADMIB010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16921
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.089"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            87..524
                     /locus_tag="JNZ89_002657"
     CDS             87..524
                     /locus_tag="JNZ89_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001524956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HAY8936485.1"
                     /translation="MKTIKPESIALFCLLSGDVDLAKHLADILPITCFVGEDWQQDFQ
                     PLDGGPVQSLSDSYSDYSVLLLIAAESEISVPEWLAHSEGTTVILIAEHNARLLTGPA
                     GGAVALIHYLNEICHSRETAVNDAFCRTLTRGSLAIPQCHLLS"
     gene            658..1202
                     /gene="cobU"
                     /locus_tag="JNZ89_002658"
                     /pseudo
     CDS             658..1202
                     /gene="cobU"
                     /locus_tag="JNZ89_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416497.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
     gene            1199..1942
                     /gene="cobS"
                     /locus_tag="JNZ89_002659"
     CDS             1199..1942
                     /gene="cobS"
                     /locus_tag="JNZ89_002659"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HAY8936486.1"
                     /translation="MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLL
                     GAISGLVFMVLQAWCGVPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLE
                     IMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPILALLAAACAVSRGTAALLMYRH
                     RYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQL
                     LKRTLGGQTGDTLGAAIELGELVFLLALL"
     gene            1954..3033
                     /gene="cobT"
                     /locus_tag="JNZ89_002660"
     CDS             1954..3033
                     /gene="cobT"
                     /locus_tag="JNZ89_002660"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HAY8936487.1"
                     /translation="MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAI
                     QLAGMPGLNGVPHVGKKAVLVMCADHGVWEEGGAISPKEVTAIQAENMTRGTTGVCVL
                     AAQAGANVYVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRHQAEKLLLDVICYT
                     RELAKNGVTLFGVGELGMANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVV
                     RRAITLNQPNPQDGVDVLAKVGGFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAAC
                     QMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACA
                     IYNNMGELAASNIVLPGNTTSDLNS"
     gene            3095..4030
                     /gene="ldtA"
                     /locus_tag="JNZ89_002661"
     CDS             3095..4030
                     /gene="ldtA"
                     /locus_tag="JNZ89_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY8936488.1"
                     /translation="MMRRVNIFCSFALLFASHTSLAVTYPLPPEGSRLVGQSYTVTVP
                     DHNTQPLETFAAQNGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVN
                     VAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
                     KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKY
                     LFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYEFDRKVPLPVTPSLR
                     AFISGQEVDVNRANAALQRRSGMPVPISSGSRQMF"
     gene            complement(4086..4161)
                     /locus_tag="JNZ89_002662"
     tRNA            complement(4086..4161)
                     /locus_tag="JNZ89_002662"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4126..4128),aa:Asn,seq:gtt)
     gene            4488..4859
                     /locus_tag="JNZ89_002663"
                     /pseudo
     CDS             4488..4859
                     /locus_tag="JNZ89_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416493.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            4858..5292
                     /locus_tag="JNZ89_002664"
                     /pseudo
     CDS             4858..5292
                     /locus_tag="JNZ89_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310806.1"
                     /note="Catalyzes the hydrolysis of AMP to form adenine and
                     ribose 5-phosphate using water as the nucleophile;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
     gene            5635..6351
                     /locus_tag="JNZ89_002665"
     CDS             5635..6351
                     /locus_tag="JNZ89_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY8936489.1"
                     /translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN
                     TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN
                     VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRD
                     VTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL
                     VDALEDDDDVQKVYHNVANL"
     gene            complement(6807..6882)
                     /locus_tag="JNZ89_002666"
     tRNA            complement(6807..6882)
                     /locus_tag="JNZ89_002666"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6847..6849),aa:Asn,seq:gtt)
     gene            complement(6983..8626)
                     /gene="yeeO"
                     /locus_tag="JNZ89_002667"
     CDS             complement(6983..8626)
                     /gene="yeeO"
                     /locus_tag="JNZ89_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic metabolite efflux MATE transporter YeeO"
                     /protein_id="HAY8936490.1"
                     /translation="MLRHILTAKNLLSNPIFKFPNCLPFLSTVCCICRQFVGENLCSF
                     ADSPSLFEMWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIF
                     MENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLG
                     KRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKVLALTYLEL
                     TVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFV
                     GAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVE
                     SVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVG
                     QIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALF
                     MPIWSASWGLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMF
                     ADWAVRAVLFYWRMVTGRWLWKYPRSEPQKCEKKPVVSE"
     gene            8631..8706
                     /locus_tag="JNZ89_002668"
     tRNA            8631..8706
                     /locus_tag="JNZ89_002668"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8664..8666,aa:Asn,seq:gtt)
     gene            8868..10130
                     /locus_tag="JNZ89_002669"
     CDS             8868..10130
                     /locus_tag="JNZ89_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY8936491.1"
                     /translation="MSLNDSKIRNLKPSSKPVKLSDSHGLYLLVNQGGSRIWYLKYRF
                     SGKESRVSLGAYPLVSLAEARQRRDDIRKLLTQNINPAHQRMSDKAAASPEKYFKAVA
                     LAWHKTNKKWSPDYAARILASMENHIFPAIGHLPVTTLKTQNFTALLRVIEDKGFLEV
                     ASRTRQQLCNIMRYAVQQGFTENNLAQHLEGVTAPPVKNHYPALPLERLPELFERIGD
                     YQQGRQLTRLAVVLTLHLFIRSSELRFARWGEIDFRNKIWTIPATREAIEKVRFSGRG
                     AKMRTPYIVPLSRQAIAILKQIKEISGHLELVFPGDHNPYKPMSENTVNRALRLMGYD
                     TKTDVCGHGFRTMACSALVETELWSRDTVERQMSHQERNSVRAAYIHRAEHLDARTAM
                     MQWWSDYLDVSREGYVAPYIYARRHKAA"
     gene            complement(10842..11726)
                     /locus_tag="JNZ89_002670"
     CDS             complement(10842..11726)
                     /locus_tag="JNZ89_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000511771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY8936492.1"
                     /translation="MGILEQEMKRLAQQAGGSHKTVHDRIKLVQRFCERLVLAQNVQI
                     RRVEQLKARYIEGYVRERLAQGITKRSLQNEMAAVRCILKQAGRDRLAQSERLNNRSL
                     GLSGASRNGTKRAITPEHYRYVLETARAKDPGMAAALELSRLMGLRSQEVVQSAQSLR
                     TWKQSLERGEPRLTVVFGTKGGRPRETVILDAVAIRKALDNALVVAEDRHGRLIDKPD
                     LKSAMKYWHSQASRLGLTGTYSPHSLRYAWAQDAIRHYLAQGFSEKEALAMTAMDLGH
                     GDGRGRYVAQVYGRKDTD"
     gene            complement(12591..12908)
                     /locus_tag="JNZ89_002671"
     CDS             complement(12591..12908)
                     /locus_tag="JNZ89_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016161430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HAY8936493.1"
                     /translation="MDRGEIWLVSLDPTTGHEQSGKRPVLIVSKASFNTFTRLPVVVP
                     VTSGGNFAREAGFTVSLDGAGTKTTGVIRCDQPRTIDMGARSGKRLERIPDAVVNEVL
                     ARL"
     gene            complement(12909..13166)
                     /locus_tag="JNZ89_002672"
     CDS             complement(12909..13166)
                     /locus_tag="JNZ89_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HAY8936494.1"
                     /translation="MYTTRLKKVGGSVMLAVPPAVLKTLGLSTDSEVGMTIDNGCLII
                     EPQKRPRYSLEELLAQCDPHAEISEEGREWIDAPAVGKEIL"
     gene            complement(13515..13721)
                     /locus_tag="JNZ89_002673"
     CDS             complement(13515..13721)
                     /locus_tag="JNZ89_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003842122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8936495.1"
                     /translation="MMLQDWHPADIIAGLKKRGTSLSALSRQAGLASSTLANALTRRW
                     PKGERLIAEALGIKPEQIWPSRYR"
     gene            complement(13718..14179)
                     /locus_tag="JNZ89_002674"
     CDS             complement(13718..14179)
                     /locus_tag="JNZ89_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012822469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936496.1"
                     /translation="MATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVL
                     RLALCGRLAACLTLLQPTLNDPIPSHLTDSLTVDALPADMPRFVPDAELLCDYSLTLA
                     QLLIGQGMQPKVEQTITGLLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA"
     gene            complement(14550..16154)
                     /locus_tag="JNZ89_002675"
                     /pseudo
     CDS             complement(14550..16154)
                     /locus_tag="JNZ89_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239422.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16167..16532)
                     /locus_tag="JNZ89_002676"
     CDS             complement(16167..16532)
                     /locus_tag="JNZ89_002676"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936497.1"
                     /translation="MVSDKRADIIVSLPQIKIPIEIKRDYHRDVWTALNGQLDKLYTK
                     NPDAAGHGIYLVFWFGSARPNSLPHLAKNTSQPENASAMENMLNETVPVDKRDRLSAI
                     VIDVSCEGIPPVEAPKSSV"
     gene            complement(16560..16769)
                     /locus_tag="JNZ89_002677"
     CDS             complement(16560..16769)
                     /locus_tag="JNZ89_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001044500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936498.1"
                     /translation="MNKTPANIMDLYSLLLDHIRDISNRIANENTDIYKQFWNEDSYG
                     RTLTPKPEESCRNIFLDLLRVRLNP"
BASE COUNT         4462 a         3991 c         4061 g         4407 t
ORIGIN      
        1 agggctgcat tcaaggtgtg gcaatattgt ttcatggctt atcaaccaga gcgccattac
       61 aggaaattaa gtggagggcg agaggcatga aaacgataaa acccgaatcg atagctcttt
      121 tttgcctctt atctggagat gtggatctgg cgaaacatct ggctgatata ttgccaataa
      181 cctgttttgt tggtgaggac tggcagcaag atttccagcc tcttgatggt gggcctgtgc
      241 aatcgttatc agattcgtat agcgattatt cagtgctgct attgatagca gctgaaagcg
      301 agatatccgt accagaatgg ctcgctcatt ctgagggaac gacggtaatt ttgattgcag
      361 aacacaatgc ccgtttgctg actggtccgg ctggtggggc tgtagcatta atccattatc
      421 tgaatgaaat ctgtcattcc agagaaaccg ctgtcaatga cgcattttgt cggacgttaa
      481 cacgaggaag tctggctatt ccgcaatgcc atcttctttc gtaatggatt gagaatgctg
      541 gatttttaat tatattacgc gcagtattaa tcgcgtaaat gttttgcggt cagcaacggt
      601 gggggatcca ttgttctgtt caatgaatac catcatacaa ttgaatcagg agtcggtatg
      661 atgatttcgg tgacgggggg catacggagc gggaagagtc gccacgcaga ggcgcttatt
      721 ggggactctt cacaggttct gtatacgcca cctcgcaaat ccttgatgat gagatggctg
      781 cacggataga acatcatcgg caaggccgcc cgacgcactg gcacacagtg gagcgctggc
      841 aacatcttga tgaattaatt catgcagaca ttaacccgca tgaggctgta ttgctggaat
      901 gcgttaccac catggtgact aatctgttgt ttgattatgg cggcgataaa gaccctgatg
      961 aatgggatta tcaggcgatg gaacaggcga ttaatgctga gattcagtcg ttgattgctg
     1021 cctgccaacg ttgtcccgca aaggttgtat tagtgactaa cgaagtggga atggggattg
     1081 tgccggagag tcgtctggca cgacattttc gtgatattgc cgggcgggta aatcagcagc
     1141 tggccgctgc ggcaaatgaa gtatggttgg tggtttcggg tattggagta aaaatcaaat
     1201 gagtaaatta ttttgggcga tgctctcttt tattacgcgt ctgcctgtac cgcgtcgctg
     1261 gtcccaggga ctggatttcg agcattattc tcgcggtatt attacttttc ctttaattgg
     1321 attattgctt ggcgcgatta gcgggctggt cttcatggtg ctgcaggcat ggtgtggcgt
     1381 accactggcg gcactgttta gcgtacttgt gctggcgctg atgaccgggg gattccacct
     1441 ggacggcctc gccgatacct gtgatggcgt attttctgca cgtagccgcg atcgcatgtt
     1501 ggaaatcatg cgtgatagcc gtttaggcac ccacggcggt ctggcattga tttttgttgt
     1561 actggcaaag attctggtat taagcgagtt ggctctgcgt ggcgaaccga tccttgcatt
     1621 gctggcggca gcatgtgcgg tcagccgcgg gactgccgca ttattgatgt atcgtcatcg
     1681 ttatgcccgg gaagaaggac ttggcaatgt gttcattggc aaaattgatg ggcgacaaac
     1741 ctgcgtcaca ctcggcttag ccgctatttt tgctgccgta ttattgccgg gtatgcatgg
     1801 tgtggctgct atggtggtga cgatggtggc gattttcatc ctcggtcagc ttctcaaacg
     1861 tacgctgggc gggcaaaccg gcgatacgct gggagctgct atagagcttg gtgaactggt
     1921 cttcctgctg gcactgctat aaagagacgt gacattcaaa cacttgccga tttactgaat
     1981 acgatccctg ctatcgatcc tgccgctatg tcgcgtgcac aacggcatat cgacgggtta
     2041 ctcaaacctg ttggtagcct gggaaggctg gaggcgcttg ccatacaact ggcaggaatg
     2101 ccggggttga atggcgttcc gcatgtgggc aaaaaagcgg tactggtcat gtgtgccgat
     2161 cacggcgtct gggaggaagg gggcgctatt tccccaaaag aagtgacagc cattcaggct
     2221 gaaaatatga cccgcggaac aaccggcgtg tgtgtgctgg cagcacaagc gggcgctaac
     2281 gtctacgtaa ttgatgttgg tattgatact gctgagccta tccccgggct tatcaacatg
     2341 cgtgttgctc gaggtagtgg caatattgct tcagctccgg caatgagtcg ccatcaggca
     2401 gaaaagttgc ttttggacgt catatgttat acgcgggagc tggcaaaaaa cggtgttacg
     2461 ctgtttggtg taggtgaact ggggatggca aacacgacac cggcagcggc aatagtcagc
     2521 acaatcactg gccgggctcc tgaagaagtg gttgggattg gcgcaaacct gccgacagat
     2581 aaactggcta ataaaattga tgttgtgcgc cgggcgatta cgttgaatca accaaatccg
     2641 caggatggcg ttgatgtcct ggcaaaagtg ggtggatttg atttggtcgg aatggctggc
     2701 gtgatgttag gcgctgcgtc ctgcggttta cccgtgttgc tggatggatt tctttcttat
     2761 gctgctgcgc tcgcagcctg tcagatgtct cctgcaatca aaccgtatct cattccttct
     2821 cacctgtcgg cagaaaaagg agcgcgtata gcgctgtcgc atttggggct ggagccttat
     2881 ctcaatatgg agatgcgttt aggtgagggg agtggcgcag ctctggcgat gcccatcatc
     2941 gaagctgcct gtgcgatata taacaacatg ggcgaacttg ctgccagtaa tattgttcta
     3001 ccggggaata cgacttctga tttgaacagt taaaaacgaa aagtctgata aaagctatac
     3061 ttaacggata gctttcgcga cttaggaaag ggacatgatg cgtcgtgtaa atattttttg
     3121 ctcatttgct ctgctttttg ccagccatac tagcctggcg gtaacttacc cattacctcc
     3181 agagggtagc cgtttagtgg ggcagtcgta tactgtaact gttcctgatc acaataccca
     3241 gccgctggag acttttgccg cacaaaacgg gcaagggtta agtaacatgc tggaagcgaa
     3301 cccgggtgct gatgttttct tgccgaagtc cggctcgcaa ctcaccattc cgcagcaact
     3361 gattttgccc gccactgttc gtaaagggat tgtggttaac gtcgctgaga tgcgtcttta
     3421 ttactaccca ccagacagta atactgtgga agtctttcct attggtatcg gccaggctgg
     3481 gcgagaaacc ccgcgtaact gggtgactac cgttgaacgt aaacaagaag ctccaacctg
     3541 gacgccaacg ccgaacactc ggcgcgaata tgcgaaacga ggggagagtt tgcccgcatt
     3601 tgttcctgcg ggccccgata atcccatggg gctgtacgcg atttatattg gcaggttgta
     3661 tgccatccat ggtaccaatg ccaattttgg tattgggcta cgggtaagtc agggctgtat
     3721 tcgtctgcgc aatgacgata tcaaatatct gtttgataat gttcctgttg ggacgcgtgt
     3781 gcaaattatc gaccagccag taaaatacac cactgaacca gatggctcga actggctgga
     3841 agttcatgag ccgttgtcgc gcaatcgtgc agaatatgag tttgaccgaa aagtgccatt
     3901 gccggtaacc ccatctttgc gggcgtttat cagcgggcaa gaagttgatg taaatcgcgc
     3961 aaatgctgcg ttgcaacgtc gatcgggaat gcctgtgcca attagttctg gttcaagaca
     4021 gatgttttaa gagcgttggt aattagaaag caaaaagcct gctagaaagc aggctttttt
     4081 gaatttggct cctctgactg gactcgaacc agtgacatac ggattaacag tccgccgttc
     4141 taccgactga actacagagg aatcgtgtga acggggcgca tattaatggc agtgcatggt
     4201 gatgtcaaag ggtgaaatgc atttttttgt ttgtttgctg tcaatttcaa caaagtggtg
     4261 agctttcaat cttattgggt aatgaaccat cgtggtgcat accctccttt tatagggcag
     4321 gggaacgcga cagctgatta aaggagcaaa tgacgaatct atcataatct cttatttgac
     4381 agttggttag cttgtacatc aacgccaaaa taaaactggc aagcatcttg caatctggtt
     4441 gtaagtaatg gcggcacttg ggccgattct taaaaaccgg aggcaacatg aacttcagac
     4501 gcctgaaata cttcgtaaaa attgtagata ttggtagcct gacccaggct gctgaagtat
     4561 tgcatatcgc acaaccagcg ctcagccagc aggttgccac actggaaggt gagttaaatc
     4621 aacaactttt gatccgtaca aagcggggcg ttacgccaac agacgccgga aaaattctct
     4681 atacccatgc gcgggccatt ttacgtcagt gtgaacaggc ccaactggcg gtgcataacg
     4741 ttggtcaggc attatcgggg caagtctcga ttggctttgc accaggaacc gctgcgtcat
     4801 ccatcaccat gcccttatta caggcggttc gcgctgaatt tccggagatc gttatctatc
     4861 ccgagcattg ctgaagtgca acgtgcgctt tatgacgcca ccaagctggt gagcggcagg
     4921 cccggtgagg aagtcaaaca gcggctacgt actggtactg tggtaaccac agatgacagg
     4981 aactgggaat tacgttactc agcttctgca cttcgtttta acttaagccg ggccgtagca
     5041 attgatatgg aaagtgcaac cattgccgcg caaggatatc gtttccgcgt gccatacggg
     5101 acactactgt gtgtttcaga taaaccgttg catggcgaga ttaaacttcc cggccaggct
     5161 aaccgttttt atgaaggcgc tatttccgaa catctgcaaa ttggcattcg ggcgatcgat
     5221 ttgctgcgcg cagaaggcga ccgactgcat tcgcgtaaat tacgaacctt taatgagccg
     5281 ccgttccgat aataagttct gaaccttctt atcagaaata gatgtgaagg agtaagtaag
     5341 acacctggca aatagcctgc aataatcgtg ggctgtttgc ttccttgggc ggatacgtgt
     5401 tttattatcg tcttaatgat ttccacatat taaaagcaag tatgctttca aaacacaatt
     5461 ataaaaaatc ccgccaacaa tataagtttt tataaaatta aatataagat tatggcttta
     5521 gaatattttt atttctaata gacgagattt ttcctgttat gatataatat gccgaattaa
     5581 cacatgttaa cgatttacca gtaatgtaaa taaattttcg aggagatcat tccagtggga
     5641 cgtaaatggg ccaatattgt tgctaaaaaa acggctaaag acggtgcaac gtctaaaatt
     5701 tatgcaaaat tcggtgtaga aatctatgct gctgctaaac aaggtgaacc cgatccagaa
     5761 ttaaacacat ctttaaaatt cgttattgaa cgtgcaaagc aggcacaagt tccaaagcac
     5821 gttattgata aagcaattga taaagccaaa ggcggcggag atgaaacgtt cgtgcaggga
     5881 cgttatgaag gctttggtcc taatggctca atgattatcg ccgagacatt gacttcaaat
     5941 gttaaccgta cgattgctaa cgttcgcaca attttcaata aaaaaggcgg caatatcgga
     6001 gcggcaggtt ctgtcagcta tatgtttgac aatactggtg tgattgtatt taaaggatca
     6061 gaccctgacc atatttttga aattttactt gaagctgaag ttgatgttcg tgatgtgact
     6121 gaagaagaag gtaacattgt tatttatacc gaacctactg accttcataa aggaatcgcg
     6181 gctctaaaag cagctggaat cactgagttc tcaacaacag aattagaaat gattgctcaa
     6241 tctgaagttg agctttcccc agaagattta gaaatctttg aagggcttgt tgatgccctt
     6301 gaagatgacg acgatgtaca aaaagtttat cataacgtcg caaatctcta attatatatt
     6361 aaagaaatct gtctttatgg cagatttctt taatctcata taatccttat aaaaaatata
     6421 atgttcaact cgtcatattg cttataaaaa atcctcgttc ccagagaaat aatatttatt
     6481 ataattccag ttcttctttt tctgattaca gaaggcaaag tgacaattac gcatagtttc
     6541 ccgataaaga cgcgacagct acatcccgca taaggcattt ttctctttat ccttgtacgg
     6601 tacttcatgg aacagagttt ttgaccttgc gaatcgtgat gtctgttggg gaggggcaat
     6661 ttgctcactg aagcgtgaga ctcgattaag cgcacgaaac acagaaatca aaaaacccgg
     6721 gcactttttt acaaggtaac cgggtaaaaa taatttttat tttttaactg ttttgagact
     6781 catagagatg tctcaaaact aaaatttggc tcctctgact ggacttgaac cagtgacata
     6841 cggattaaca gtccgccgtt ctaccgactg aactacagag gaatcgtgag aacgaggcga
     6901 atattagcga tgcccaccca caatgtcaaa gcctgttatt taaatttgaa atcgtttgct
     6961 gaaataatct gcattttgtc gtttattccg acacaactgg ctttttttca cacttttgcg
     7021 gttcggatcg agggtatttc cacagccaac gtccagtaac cattcgccag taaaacagca
     7081 cggcccgcac agcccagtcg gcaaacattc ccatccagac accaaccaca ccccagccaa
     7141 gcatgatgcc cagcacataa ccgacgacaa cccggcaacc ccacatgctc aacatagaaa
     7201 cccacatggc gtaacgggca tcgcgagcac ctttaaatcc agcgggtagc ccccatgagg
     7261 cggaccaaat aggcataaat aaagcattta gccaaatcag aatcacaacg acatgtttaa
     7321 cctgtggatc ctgggtgtaa aacgatgcca taaccccggc aaagggagcc gttagccagg
     7381 cgatggccgt taatccaaga gtggaaagcc agaacacatg ccgcaactga atctctgctt
     7441 gcgctatctg ccctaccccc aaccttcggc ctgtaatgat cgtagaagca gagccgagcg
     7501 cacttccggg taagttgata agagccgcaa ttgaaaacgc gataaaattt ccggcaataa
     7561 cactggtccc catcccggca acgaacattt gggttaataa ccgaccactg gtaaataaca
     7621 ctgattcgac actcgcggga ataccaatcc ccatgacttc ccagataatg ctaaaattca
     7681 gcggtttaaa atagctcttt aacgaaatcc ttagcgcagg attaaaacca atcgccagca
     7741 cccacaaaat tgcaactgcg ccaatataac gagaaatggt taaacccagc cctgccccga
     7801 caaatcccag tcccggccag gagaaaaggc cgtaaatcaa tatgccgcta ataataatat
     7861 taagaatatt caggctaccg ttaatcaata gcggtatttt cgtattccct gcaccacgaa
     7921 gtgccccgct accaataaga gtgatggcag ctgctggata actgagtacc gtcagctcca
     7981 gataagtcaa cgccagtact ttaacttctg tcgtggcatc acccgcgacg aaatcaataa
     8041 tttgttcgcc aaaatgatga ataagcgttg ccaacagtac ggcaaacaac gtcatgatca
     8101 ccaatgactg ccgcgtcgcc accctcgctc gtcgtcgatc ccgcttaccg agactaaatg
     8161 ccacaacgac agtagtacca agatcgatag cagcaaaaaa agccataatg accatattga
     8221 agctgtccgc caatcccacg ccggccatcg catcttttcc cagccagctg accagaaaag
     8281 tgctcagaac ccccatcaac aggacacagg cattctccat gaagatagga acagcaagcg
     8341 gggttatctc gcgccagaac aacactttgt agctcttgcg tttagcgtgc cagcgagtgc
     8401 cgtgaacaac ctggcgtaaa gcagaggaga tattcaaagc cgaccttaat tgcagaaagt
     8461 gaaaccacat ttcaaataat gagggagaat cagcaaagct gcaaagattt tcgccaacaa
     8521 attgtctgca aatgcaacaa actgttgata gaaacggcaa acagttgggg aatttaaaaa
     8581 tcgggtttga caaaagattt ttcgccgtta agatgtgcct caacagcgat tcctctgtag
     8641 ttcagtcggt agaacggcgg actgttaatc cgtatgtcac tggttcgagt ccagtcagag
     8701 gagccaaatt ccgattctta cgctatctta ttagtcctta tttgatattg attcaataag
     8761 ttagcgtgaa aatctttcca gatgtgtatt cagttttccc tccgcatccg gttaatttgg
     8821 tggtcagatt tgggggcagg ttggttcgat tctggagtga cccccaaatg tctttaaacg
     8881 attcaaaaat ccgtaactta aaaccctctt caaaacccgt aaaactgtct gattcgcacg
     8941 gtctgtatct gctggtcaat cagggcggtt cgcgtatctg gtatctcaag tatcgcttca
     9001 gtggtaaaga gtcccgcgtc agtctgggcg catatcctct ggtttcactt gctgaagcaa
     9061 gacaacgacg tgacgatatc cgtaagctac tgacgcagaa tattaacccc gcccaccagc
     9121 gcatgtctga taaagccgca gcgtcaccgg aaaagtattt taaagccgtg gcgcttgcat
     9181 ggcacaaaac caacaaaaaa tggtcgcctg attatgccgc gcgcatcctc gccagcatgg
     9241 aaaatcatat ctttccggcg attggtcatc tgcctgtcac tacgctgaaa acgcagaatt
     9301 tcactgcgtt actgcgggtt attgaggata aaggttttct ggaagtcgcg tcccgaaccc
     9361 ggcagcaact ctgcaacatc atgcgttacg ccgtacagca gggattcacc gaaaacaacc
     9421 tggcgcagca tctggaaggc gtcaccgcgc cgccggttaa gaatcactat cccgccctgc
     9481 cgctggagcg gttgcccgaa ttgtttgagc gcattggcga ctatcagcag ggacggcagc
     9541 ttacgaggct ggcggtggtg ttgactctcc acctgtttat ccgttccagc gagctgcgct
     9601 ttgcccgctg gggtgagata gatttcagaa acaaaatctg gaccatcccc gccacaaggg
     9661 aagcgattga gaaagtccgt ttctctggcc gtggcgcaaa aatgcgtact ccatatatag
     9721 tgccgctttc tcgtcaggct atcgccattc tgaagcagat aaaggaaatc tccggccatc
     9781 tggaactggt gttccccggc gaccataacc cgtataagcc gatgagcgaa aacactgtca
     9841 accgggcgtt gcgtcttatg ggctatgata ccaaaactga tgtctgtggg catggattcc
     9901 ggacaatggc gtgtagcgca ttagtggaaa ctgaactctg gtcacgggat accgtggagc
     9961 ggcagatgag tcatcaggag cgcaacagcg ttcgggcagc gtatatccac cgggctgaac
    10021 atctcgacgc ccgtacagcc atgatgcagt ggtggtcgga ttatctggat gtaagtcgcg
    10081 aggggtacgt tgcgccgtat atttatgcgc ggcggcataa ggcggcctga gacagtggct
    10141 atataatttg ttaaaaatga aaaagcagat cctgattgaa tccggatctg ctttttacat
    10201 taggcaatcg ctgccagaca atctgcacca gaaacgccat aactgcacca gttcagtacc
    10261 accgcttacc tgcgccagtc tgccgtcgcc tgtctgtgtc aggactgcgc cagatcttat
    10321 cgaataaaca tcaaactgcg ccagtgttac ggccctttca gccctttggc cttttccggt
    10381 ctggcgctgt tacccttagc cgccccttac cctttccggc ctttttcctt tgctggcgca
    10441 atcgccagaa aaatcgtcaa gctgcaccag aagcctgcca ataggtcata ccgttcagaa
    10501 gcatcgttat tgagaggaaa ccgtacaaaa aatttctacg tagaaatttt ttcggtggat
    10561 aacgatgaat aaagagtatt ttataatgtg atggctatca aaaatcgacc atccaaaaat
    10621 aattcattga tttataatga ataaccatga atttaatagt cgatgattat tgtttttatc
    10681 agtattgata ggaaagtata caaaaaattt tggccccaaa attttttgta cgaaaaccga
    10741 tgaataacgc gaaattaata ggaaaccatc caaaattatt tggggcaaat aattttgccc
    10801 gaaaaccgat ggataactcg atcttttcaa agcaacggct atcaatcagt atcctttctt
    10861 ccgtaaacct gcgccacata ccgcccgcgc ccgtcgccgt gtcccaaatc catcgccgtc
    10921 attgccagcg cttctttctc actgaatccc tgcgccagat aatgacgaat ggcatcctgc
    10981 gcccacgcat agcgcaacga gtgcggggaa tatgtgccag ttaacccgag acgtgacgcc
    11041 tggctgtgcc agtatttcat cgcgcttttc aggtcgggtt tatctatcag cctgccgtgg
    11101 cgatcttctg ccacaaccaa cgcattatcc agcgcttttc tgatagcgac agcatccaga
    11161 ataacggttt ctcgcggacg cccgcctttg gtgccgaaca ccacggttaa acggggctca
    11221 ccccgctcca gcgattgctt ccacgttctt aatgactgcg cactttgcac cacctcctgc
    11281 gaacgtaatc ccatcagcct tgagagttcc agcgccgctg ccatccccgg atcttttgcg
    11341 cgggcggttt ccagcacata gcggtaatgc tccggcgtga tggcccgctt cgtaccgtta
    11401 cgggatgcgc cagacaggcc cagcgagcgg ttattcagtc gctcactctg cgccagcctg
    11461 tcacgcccgg cctgtttcag aatgcagcgc accgccgcca tctcattttg cagggaacgc
    11521 ttcgtgatac cctgcgccag tcgttcacga acatatccct caatataccg cgccttaagc
    11581 tgctccaccc ggcggatctg cacattctgt gccagaacca gacgctcaca aaaccgctgc
    11641 accagcttaa tacggtcgtg aacggtctta tggctgccgc ccgcctgttg tgccaatcgc
    11701 ttcatttcct gctccagaat ccccatacat tccccctttc atgattgccg caaactcatc
    11761 cccaaaaact caacactgat acagcgttcc ccggcgcaca ggccgatagc ccctgagttt
    11821 tgtcggggct gcgaacgata cctgagcgcc ggggcggcag ccgttgaggt gtggtggggc
    11881 ttcggttgtg ctctcagagc agccgcccgc ttgcgcgggt catcccccgg atcgtccaga
    11941 tccgcctcgg tatcggttca tattctcctt atgggtaaat ggcctaaaaa ggcggtgtca
    12001 gaatccagcc atgagctggc gcagttgagt tttctggtgc aggtcgaaag ggcttgcgtg
    12061 cgtcactttc ccgctttgcg cggttaaagt gacgcacgga tctggtgcag catctgagat
    12121 ttatcgtctg gtgcagtttt acggtcacgc ggcagcaaag cctgacggca atgcaggccg
    12181 cagcccgtaa ggtaaaaggc gctgagggtg tcagcagatg caggttagcc gggagaattc
    12241 cggcgcggtg cagattcaga ccagcaggct ggcgaagtaa aaggatgtat cgtattaaaa
    12301 ctctggcctc cgtcgcgatg ttctgcgacc cggtgtttgc agaggtctgc accggtaaac
    12361 ggatcgaccg tcctgataac aggcgcttct ttcaggttgt gaagcgttgg gcgctgtcta
    12421 cgacagcata gagcaagggg gagactacgc ctgtgccgct ggcgcggaaa ggagaaactg
    12481 tttttacctg caaaaggatt ttttaatcac ttgttgttat aaaaaatgag ggcgctgtat
    12541 gtgacagcgc cctcgttcag gttacataaa aaatatcagc tcagaatagc ttacagtcga
    12601 gccagcacct cattcacgac agcatcgggt atacgttcca gccgcttacc gctccgagct
    12661 cccatatcaa tggttctggg ctggtcgcag cgaataacgc ccgttgtttt tgttcccgcc
    12721 ccgtccagtg aaacggtaaa accggcttcg cgggcaaagt ttccgccgct ggtgacaggg
    12781 acaacaacag gcaaccgggt gaacgtgtta aacgatgcct tcgatacgat gagtaccgga
    12841 cgttttccac tttgttcatg gccagtggtg ggatccagtg aaacgagcca gatttctcct
    12901 ctgtccatct acaggatctc cttgcccacc gcaggcgcat caatccattc ccgaccctct
    12961 tcgcttattt cagcgtgcgg atcgcactgc gccaacagtt cttcgagcga atagcgggga
    13021 cgtttttgag gttcaataat caggcagcca ttatcaatgg tcatgcccac ttcgctgtcc
    13081 gtcgacagcc ctagcgtttt cagcactgcg gggggaaccg ccagcatgac ggatccgcca
    13141 acctttttca ggcgagtggt atacatagag cacctccgga tattatattt taatataaca
    13201 tccatgatag acgatgcaca actattcatc agattcattg tggtttcctt agtgtaataa
    13261 agcgtgaaga aagccttaat ccatcggaag acagatccgg cagttttcaa aggcgacatt
    13321 gccggtaaaa gggcaaccgt cctgatacat caggcgcttc tttcaggtca tgaagcattt
    13381 cgtacaggcg ggagcttagt gcgtaacaaa gaaggccgat aataggaaac tgcttttgca
    13441 gttcaaagga ttatgacggt tcggataaac aaaatgcggc gcagcttccg tatccgggct
    13501 gcgccgcagg aacatcagcg gtagcgcgaa ggccagattt gctcaggctt gatgcctaac
    13561 gcttcggcaa ttaacctttc gcctttgggc cagcggcggg taagcgcatt agccagcgtg
    13621 gaggacgcca gacctgcctg acgcgaaagc gctgacagcg aagtgcctcg ttttttcagc
    13681 ccggcgataa tgtcggcagg atgccagtcc tgcagcatca tgcagccacc tcgtcgataa
    13741 acttcacgcc atcggcggtg cggagccagc gcggggcttt catttcggcg gcaaaatacc
    13801 agaccagttc acataataag cctgttatcg tctgctccac ttttggctgc atcccctgcc
    13861 cgataagaag ttgcgccagc gtcagtgagt aatcacaaag taattctgcg tcggggacaa
    13921 atcggggcat atcggcaggt agagcatcaa cggtcaggct gtcagtcaga tgagacggga
    13981 tggggtcgtt cagcgtgggt tgcagcaaag tgagacaggc ggcaagtcgc ccgcaaagcg
    14041 ccagccgcag caccggatct tcgctttcga tcagggtttc ggcgacgttt tcgcagtggt
    14101 ctgccagtac ggtaaaatct gtggcagcac tgaagggaac agcaagtaac gggtgtgtct
    14161 gagtggggat cgtagccata aaggcagcct ccagtatgtg gtttgaaaac caccaccaga
    14221 ggttccaatc tcatgggtgg tggactgaac gaggttggaa ctaccggcca tactggaacc
    14281 ggcgcacctt acggtgcccc cgcccagccc accataattt tggtgtagct aagcgcgcga
    14341 cataaaaaaa gacgcagacg cgtcacgtgt cgccagtatg gttatatttc ggggttccaa
    14401 tcccggcacc tgattttgca ggtgcgggta aaagataccg ctttcggttg aaaacggcaa
    14461 ggggaagtcg tggaatagag atcgcagatt gttataaata tacacaatag ttaatgttaa
    14521 caaagacggc acatatatta actttactct caatctgctg aatagtttat cgcatgtaat
    14581 tctcgggtca tatagtggat accctccttc ttttctttca tcccctcttg cctcaccata
    14641 aaagcaaacg aaaaaattgc tgaacgagtt atctgaagta aatgctcaaa atggtgaata
    14701 aaatcacttt ctttgataaa aagaatatct tctattagtt gataagattc gtaaatgtcc
    14761 tcaggtttat cacttttatg tacaactaaa aacttatgct ctaaaccatt gcgccattct
    14821 ttatagaaag ccaactcccc acccttatct ttattcaggt cggtagcaat actgtacagc
    14881 gccagaagcc ctggtgattt taccttttca aataattgtc ttctgttatc aacatctaac
    14941 tgccagaaat tctgaaaata gatattcttc tgaggtgtac ctttttttgt tgttgggtaa
    15001 agattataaa gttcacatat ggctaccgca attttatcaa gaataccaaa gcaaagacga
    15061 aatgccgtcc tgattttttc aatttctatt cctaaaactt catcattata caattccaga
    15121 aaatggcttt cgtacttaat gtaatccgta ttttgtggat gaagataatc aaaataaaga
    15181 tggcgtgcga gtgaaaactc cgatttaagg cgatttaata ccatctccat gggaatgata
    15241 aaatcacctg ttacaccgcc tcacgaagca atcacaagat catctgtagc actccctaca
    15301 catgggcaat acaggccatg ttctgataaa gtcagatgat ttctaagaca aaactgtcga
    15361 tatgggctta acacttcgaa ctcttgttgt gtaagtgctt catcgtgttc gtcagtttca
    15421 tcatcaacag catattctgc gattttctcg ttagtctgcg ctatgcgttc taaatagaac
    15481 gattcccatt gtggtgggat attttttgat acagacgctt taatatatcc tgctctcact
    15541 tcttttagta acttgattga aaatgaagat gaaataagat tgaggaccat aagtgacatc
    15601 gaacggttga cccaagcctg tggtatatct aatcccttaa gattggtaag atcataatat
    15661 ctcaatgact cactgagccg aaattgactt cttaatgaat tagccaaatt aacagatagt
    15721 tcagcctgaa attcctcctg ctcctcagca gatagcttaa aagaacgcca gtagatattt
    15781 tttaaggaaa ccaattcttc tatcgatttg aatgtatggt cattggggtt agtaatgctc
    15841 accagattag atagcgcatt accatagtta taatagtaaa ggcactctcc taacactgat
    15901 ataaatgctt ctttgttatc ttccatcagg ttgcaaccaa gctctgacgc atttttatta
    15961 ttttgcatct gcccgatgtc aacaagagca cccgcaatgt tcgccaatac tataaagtag
    16021 ttatcgttcc tgattgttat tctttccagt ttgttcagga acgcaactga ctgttgataa
    16081 gattcgtcaa atcttccaat atcaaccagt tggctaatga aattactttc atcgacaagt
    16141 tcttttgtta tcaaaataaa ttttccttat acagaggatt tcggtgcttc aacaggaggt
    16201 atgccctcac aggagacatc tataactatc gctgataagc ggtctctttt atcaaccggc
    16261 acagtttcat taagcatatt ttccattgca ctggcgtttt caggttgaga tgtatttttc
    16321 gccaaatgag gcagggaatt cggtcgagca gaaccaaacc aaaaaaccag atagataccg
    16381 tgaccagcag catcggggtt tttagtataa agcttgtcca attgcccatt aagtgcagtc
    16441 cagacatcac gatgataatc acgctttatc tcgataggta tttttatctg cggtagtgaa
    16501 acaatgatat ctgccctttt atcagaaacc atgtgtcctt ctggttcaca gcttattttt
    16561 tatggattaa gccggacacg gagtaaatcc agaaaaatat tacggcaact ctcttcaggt
    16621 ttaggcgtta gggtacggcc atagctgtct tcattccaga attgcttata aatatcggta
    16681 ttttcattgg caattcggtt agaaatatcc cgtatatgat caagcaataa tgagtaaaga
    16741 tccattatgt tggcaggcgt tttattcatc aatgtactta cagtctgctt ccagtcggca
    16801 tgatggaact gtgattctct ataacgaatt ttctgattgc tttgggcatg tgagagatga
    16861 tcccgataac tttcacattc aggcagcagt aataagcgct caagtacttc actagcatcg
    16921 t
//
LOCUS       DADMIB010000090        16797 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.090, whole genome shotgun sequence.
ACCESSION   DADMIB010000090 DADMIB010000000
VERSION     DADMIB010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16797
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.090"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..2017
                     /gene="fhuE"
                     /locus_tag="JNZ89_002678"
     CDS             <1..2017
                     /gene="fhuE"
                     /locus_tag="JNZ89_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
                     /protein_id="HAY8936499.1"
                     /translation="DYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVM
                     ENTLEISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV
                     VRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDG
                     KIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWG
                     GLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVE
                     FDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYEL
                     FGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTT
                     HMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWST
                     YASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQ
                     STGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN
                     PNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLF
                     TRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRNFSITGTYQF"
     gene            complement(2077..3510)
                     /gene="ptsG"
                     /locus_tag="JNZ89_002679"
     CDS             complement(2077..3510)
                     /gene="ptsG"
                     /locus_tag="JNZ89_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000475716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIBC"
                     /protein_id="HAY8936500.1"
                     /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
                     SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
                     LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
                     AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
                     QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN
                     RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMHDG
                     TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED
                     AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV
                     AGSGVQAIFGTKSDNLKTEMDEYIRNH"
     gene            complement(3805..4602)
                     /locus_tag="JNZ89_002680"
     CDS             complement(3805..4602)
                     /locus_tag="JNZ89_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY8936501.1"
                     /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL
                     PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT
                     PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
                     RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
                     NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR"
     gene            complement(4613..5617)
                     /gene="holB"
                     /locus_tag="JNZ89_002681"
     CDS             complement(4613..5617)
                     /gene="holB"
                     /locus_tag="JNZ89_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HAY8936502.1"
                     /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL
                     SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGIDAVREVTEKLNE
                     HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR
                     LHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSAGSPSAALALFQGDNWQARETLCQ
                     ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE
                     LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
                     "
     gene            complement(5614..6255)
                     /locus_tag="JNZ89_002682"
     CDS             complement(5614..6255)
                     /locus_tag="JNZ89_002682"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HAY8936503.1"
                     /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT
                     QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD
                     LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE
                     QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA"
     gene            complement(6245..7267)
                     /gene="yceG"
                     /locus_tag="JNZ89_002683"
     CDS             complement(6245..7267)
                     /gene="yceG"
                     /locus_tag="JNZ89_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YceG"
                     /protein_id="HAY8936504.1"
                     /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL
                     KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL
                     ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
                     FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE
                     TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI
                     TGLPPGAISTPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL
                     KEKNAQ"
     gene            complement(7270..8079)
                     /gene="pabC"
                     /locus_tag="JNZ89_002684"
     CDS             complement(7270..8079)
                     /gene="pabC"
                     /locus_tag="JNZ89_002684"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HAY8936505.1"
                     /translation="MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQ
                     RLQDACQRLMIFCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR
                     ILSVTVYPAHYDRLRNEGMTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
                     EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE
                     VQASLEEALQADEMVICNALMPVMPVRACGDVSFSSATLYEYLAPLCERPN"
     gene            complement(8199..9440)
                     /gene="fabF"
                     /locus_tag="JNZ89_002685"
     CDS             complement(8199..9440)
                     /gene="fabF"
                     /locus_tag="JNZ89_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HAY8936506.1"
                     /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
                     AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG
                     AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
                     ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
                     ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN
                     GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKAIFGEAASRVLVSS
                     TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNLDEGCDLDFVPHEARQVSGME
                     YTLCNSFGFGGTNGSLIFKKI"
     gene            complement(9528..9764)
                     /gene="acpP"
                     /locus_tag="JNZ89_002686"
     CDS             complement(9528..9764)
                     /gene="acpP"
                     /locus_tag="JNZ89_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HAY8936507.1"
                     /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
                     MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
     gene            complement(9975..10709)
                     /gene="fabG"
                     /locus_tag="JNZ89_002687"
     CDS             complement(9975..10709)
                     /gene="fabG"
                     /locus_tag="JNZ89_002687"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HAY8936508.1"
                     /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA
                     ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE
                     WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
                     FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA
                     VAFLASDEAAYITGETLHVNGGMYMV"
     gene            complement(10722..11651)
                     /gene="fabD"
                     /locus_tag="JNZ89_002688"
     CDS             complement(10722..11651)
                     /gene="fabD"
                     /locus_tag="JNZ89_002688"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HAY8936509.1"
                     /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL
                     WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA
                     GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVN
                     FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
                     ITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG
                     PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL"
     gene            complement(11667..12620)
                     /locus_tag="JNZ89_002689"
     CDS             complement(11667..12620)
                     /locus_tag="JNZ89_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HAY8936510.1"
                     /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI
                     AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
                     CPAFDVAAACAGFTYALSVANQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG
                     AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT
                     ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
                     AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF"
     gene            complement(12688..13758)
                     /gene="plsX"
                     /locus_tag="JNZ89_002690"
     CDS             complement(12688..13758)
                     /gene="plsX"
                     /locus_tag="JNZ89_002690"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415608.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HAY8936511.1"
                     /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDA
                     ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRMALELVKEGRAQAC
                     VSAGNTGALMGLAKLLLRPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ
                     FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN
                     ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS
                     LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA
                     RLESVYPAGFELLDGGKSGTLR"
     gene            complement(13839..14012)
                     /gene="rpmF"
                     /locus_tag="JNZ89_002691"
     CDS             complement(13839..14012)
                     /gene="rpmF"
                     /locus_tag="JNZ89_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HAY8936512.1"
                     /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
                     ADGYYRGRKVIAK"
     gene            complement(14064..14585)
                     /gene="yceD"
                     /locus_tag="JNZ89_002692"
     CDS             complement(14064..14585)
                     /gene="yceD"
                     /locus_tag="JNZ89_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001174481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HAY8936513.1"
                     /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
                     VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL
                     PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEVQK
                     PNPFAVLASLKRK"
     gene            14784..15368
                     /gene="yceF"
                     /locus_tag="JNZ89_002693"
     CDS             14784..15368
                     /gene="yceF"
                     /locus_tag="JNZ89_002693"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-methyl-GTP pyrophosphatase"
                     /protein_id="HAY8936514.1"
                     /translation="MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQL
                     VLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTF
                     YTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITL
                     FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG"
     gene            complement(15480..16439)
                     /gene="rluC"
                     /locus_tag="JNZ89_002694"
     CDS             complement(15480..16439)
                     /gene="rluC"
                     /locus_tag="JNZ89_002694"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HAY8936515.1"
                     /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
                     GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
                     LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
                     RSLHEQLREKGMQKDYLALVRSQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET
                     RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG
                     LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR"
BASE COUNT         4176 a         4557 c         4055 g         4009 t
ORIGIN      
        1 tgattacagc gtaacgtcta cctctgcggg taccaaaatg cagatgactc aacgtgatat
       61 tcctcagtcg gtcactattg ttagccagca gcggatggaa gatcagcagt tacaaacgct
      121 gggcgaagtg atggaaaaca cgctggagat cagcaaaagt caggcggatt ccgatcgtgc
      181 tctttattat tcccgcggat tccagatcga taactatatg gttgatggta tccccaccta
      241 ttttgaatcg cgctggaatc tgggcgatgc actttctgat atggcactgt ttgaacgcgt
      301 agaagtagtg cgtggcgcga caggactcat gaccgggacg ggtaatccat ctgcggcaat
      361 tgatatggtt cgaaaacacg cgaccagtcg tgaatttaaa ggcgatgtct cggcggaata
      421 cggtagctgg aacaaagaac ggtatgtggc ggatttacaa agcccactca ccgaagacgg
      481 taaaatccgc gcgcgaattg tcggcggcta ccagaataac gactcatggc tggaccgcta
      541 caacagtgaa aagaccttct tctccggcat tgtcgatgct gatttaggcg atcttacgac
      601 gctttcagcc ggttacgaat atcagcgcat tgatgttaat agccctacct ggggcggttt
      661 accgcgctgg aatactgatg gcagcagcaa cagttacgat cgtgcacgca gtaccgcacc
      721 tgactgggcg tacaacgata aagagatcaa caaggtcttt atgaccctga agcagcggtt
      781 tgctgatacc tggcaagcga cactgaatgc cacccactct gaagtcgaat ttgacagcaa
      841 aatgatgtat gtcgatgcct atgtaaacaa agcggatggt atgctggttg ggccatacag
      901 taattatgga cctggctttg attatgtcgg cggcaccggt tggaacagtg gcaaacgtaa
      961 agttgatgcg ctggatttgt tcgctgacgg tagttatgaa ttgtttggtc gtcagcacaa
     1021 tctaatgttt ggtggcagtt acagcaaaca aaacaatcgt tacttcagtt catgggccaa
     1081 catcttcccg gatgaaattg gcagtttcta caactttaat ggcaatttcc cacaaaccga
     1141 ctggtcacca cagagcctgg cacaggacga taccacacat atgaaatcgt tatatgctgc
     1201 cactcgagtc acccttgccg atccgctgca tctgatcctc ggcgcacgtt ataccaactg
     1261 gcgggttgat acgctgactt acagcatgga gaaaaaccac accacgcctt acgctggtct
     1321 ggtgtttgac atcaatgaca actggtcgac ctacgccagc tatacctcta ttttccagcc
     1381 gcaaaatgat cgtgacagtt caggcaaata tctggctcca atcaccggta acaactacga
     1441 gctgggtctg aaatcgggct ggatgaatag ccgtctgacc accacgttag ccatcttccg
     1501 tattgagcag gataatgtcg ctcagtccac cggtacacct atccccggca gcaacggcga
     1561 aaccgcctat aaagcggtgg atgggacagt cagtaaaggg gtggaatttg aactcaacgg
     1621 cgcaattacc gacaactggc agctgacatt tggcgcaacg cgctatattg cagaggataa
     1681 cgaaggaaac gccgttaatc ctaatctgcc acgcaccacg gttaaaatgt tcaccagcta
     1741 tcggttgcct gtcatgccag agttgacagt cggcggtggt gtgaactggc aaaatcgcgt
     1801 gtataccgac accgtgacac cgtatggcac cttccgcgcc gagcaaggta gctacgcgct
     1861 ggtggatctc ttcacccgct accaggtgac gaaaaacttc tcgttacagg ggaacgtcaa
     1921 taacctgttc gacaaaacct acgataccaa catggaaggt tctatcgtct acggcgcacc
     1981 gcgtaatttc agcattaccg gcacgtatca attctgaata acacctgtaa aaaaggcagc
     2041 catctggctg ccttagtctc cccaacgtct tacggattag tggttacgga tgtactcatc
     2101 catctcggtt ttcaggttat cggatttagt accgaaaatc gcctgaacac cagaacccgc
     2161 aaccactacg cccgctgcgc ccagtttctt caggccagcc tgatccactt tagacacatc
     2221 agcaacgctg acgcgcagac gggtaataca tgcgtcgagg ttagtaatgt tttctttacc
     2281 accaaatgca gcaaccagag ccggtgccat ttcgctggta cctgttgctt ttgcatcttc
     2341 agtcgcgtct tcacgacccg gcgttttcag atccagtgct ttaatcagca cgcggaagat
     2401 ggtgtagtaa acaatcgcat aaccgatacc gacgatcggg aacagccaca gtttgctgct
     2461 gttaccagac agaacgataa agtcgatcag accgtgcgag aacgacgtac cgtcatgcat
     2521 ccccagaaga atacagattg ggaatgccag gcctgccaga atcgcgtgga tgatgtacag
     2581 gatcggcgca acgaacatga aggagaactc gatcggctcg gtgataccgg tcaggaacga
     2641 ggtcagcgcc gcggagatca taataccgcc cactttcgcg cggttttctg gtttagcaga
     2701 gtgccagata gcaattgcgg cagctggcag accgtacatt ttgaacagga agccaccaga
     2761 cagtttaccc gcagtcgggt cacccgccat ataacgcgga atgtcgccgt ggaaaacctg
     2821 acctgctgcg ttggtgtatt caccaatctg catctggaaa ggtacgttcc agatgtggtg
     2881 cagaccaaac ggtaccaggc aacgttcgat gaaaccgtaa atgccaaacg caactaccgg
     2941 gttctggtaa gcagcccact gagagaaggt ctggattgca gaaccaatcg gcggccaaat
     3001 gaaggacagc acaacgccag taaagatggc agccaggcca gaaatgatcg gcacaaagcg
     3061 tttaccggca aagaagccaa gatactcagg cagcttaata cggtagaaac ggttaaacat
     3121 gtacgctgcg atcgcaccgg agataatccc tccgagtacg ccagtatccg ctaggtgttt
     3181 agaggcgatt tcttcagcag gtaaatgcag taccagtggc gcaaccacgg ccatggtttt
     3241 aaccatgatg ccataggcaa caactgcggc cagcgcggat acgccatcgt tattggtaaa
     3301 gccgagggcg acaccgatcg caaaaatcag tggcatgttt gcaaagacgg aaccgcctgc
     3361 ttctgccata acatgcgata caacggcggg cagccagctg aaattcgcgg aaccgacgcc
     3421 cagcagaata cctgcgatag gtagtacgga taccggcagc atcagcgatt taccgacctt
     3481 ttgcaggtta gcaaatgcat tcttaaacat aattgagagt gctcctgagt atgggtgctt
     3541 tttttacgtt ctcacgcgtg gcaagggggg agagcctcgc cgtgtacagg gcatctaagc
     3601 gccctttatt tattacacag agtaaaataa ttcagtgcca atttgtttga cggctatcac
     3661 gtttcaactt cagatcattg gagaagttgc acattttgac aaaacatatg tcacaatatt
     3721 tcaaacgcgg ttattcaccg cccaattttc ggcggtgaac tttactcgtt ttagccatta
     3781 attacgagct ttaaaaaaac tcattcaacg gatggattga aggcgggaag cgtcgatgtg
     3841 aaacagacgg gcgaagttat cggtggttac ctgcgccagt tcttcaacgg caacaccttt
     3901 caacacagcc atgtattctg caacgtcacg aaccatcgca ggttgattct cttttcctcg
     3961 atgcggtacc ggcgcaaggt aaggtgagtc agtttccacc agtaatcgat ccagggggac
     4021 ataacgcgca gcatcgcgca gttgctccgc attacggaag gtcacaatgc cggaaaagga
     4081 gatgtaaaat ccgagatcca gtaatttacc cgccgtttct ctgtcctctg taaaacagtg
     4141 tagtacgcca ccgcaatccg tcactttttc ttcgcgcaga attgccagcg tatcggcacg
     4201 ggcgtcacgg gtatggacga taaccggctt gttcagttca cgaccaatct ggatatgatg
     4261 gatgaaggac tcttgctgac gtactttagt ttccggtgtg taataataat ccagcccggt
     4321 ttcacccagc gctacaacac cctcttctgc cgccagacgg cgtaaatctt ctacatcgta
     4381 gggatcattc tggttgagtg gatgcacgcc acaagaaaat acgacgttgt cacgttcgcc
     4441 taccagatcc cgcatatgta aataacccgg taatgttgtg gcgactgcca gacaaaattt
     4501 cacatcgcgt gcggcggctt tcgccagaac gtcatccacg tccttatgca aagattcata
     4561 atccagacca tcgagatggc agtgtgagtc gactaaaaac atgatgtctc tcttaaagat
     4621 gaggaaccgg tagcacaacg cccggttgca ggtaatgctc aatacgcagt aaaagatcgg
     4681 tgatgagaag ctcgcggttg atgcctgtga cagacattaa ctgttcacga atgtggcaaa
     4741 catcccccag tatagcctgc aggcgcgagg gagaaagatg gtttgccagt tcggcgacca
     4801 ggcccggcac atcaacattg gtcacctgtg cagcgccatg atggcgtttt agcgcatcca
     4861 tcagcaacgt tgccagccag tgtaaacgcg ccggagcttg ttcatgatta agggccgcca
     4921 gcagcgaata ccagtcgccc gatggtacgc tatatgccaa cgcctgacac aatgtttcac
     4981 gagcctgcca gttatctccc tgaaacaacg ccagtgccgc gctaggcgaa ccggcactta
     5041 agcgcaatgc ggcaagtaat gcatcctgtg acattgtcac ttcgcgtgaa agccaggtca
     5101 cggcgtactg ttccggcggc ggcgcaaggt aatgtaaccg acaacgacta cgtaatgttg
     5161 ccagtaaacg ttcaggctcg cgggtagcca ggaaaaacca ggtttctgct ggtggctctt
     5221 caagcgtttt cagcaatgcg ttagccgcgg cgtcggtcag taaggcagca tcggttaccc
     5281 agacaacttt cgcaccacct aggcgtgcgt gctcattcag cttttcggtg acctcacgta
     5341 ccgcatcaat gcccagcgta tttttccctt tttcgggagc cagggtgtag taatcgggat
     5401 gcgtgccagc ctgcatcaac tgacatccac gacagtgacc gcaacttttg tggccctgcg
     5461 gttgttggca gagtaaataa cggctcaggg cgtagattaa agcatcatcg cccatgcccg
     5521 gtaacgcctg aatgagtagc gcatggtgac ctcttccggc ctgatagctg gctaccagtt
     5581 tttcgaaatc aggtcgtaac catggatacc atctcatgcg tccaactcct tcacccagtg
     5641 ggtcacggta gtgcggattg catccatcac ggcctccagc ggctgggtgg catcaatggt
     5701 atgaatactt ttatcttgtg cagccagttc cagatagcgg gcgcgggtgc gattaaagaa
     5761 atcgaaagac tcttgctcaa tacgatccag ctcgccgcgc gcacgcgcgc gttttaagcc
     5821 aacttccggg gtaacatcga gatagagcgt taagtcaggg cgaaaatccc cgagaacagc
     5881 atcacgcagt gttgccagca tatgttggtc aataccacgt cctccgccct gatacgcctg
     5941 agtggagaga tcgtggcgat cgccaatcac ccaggtgccg ttagccagag ctggtttgat
     6001 gaccgtttct accagttgaa cgcgcgcggc ataaaacatc agaacttcgg ctttatcggt
     6061 aatgacttca tcgcctaccg atttgatatc cagcaccagg cttcttaact tttcggcaag
     6121 ttgcgtaccg ccaggttccc gagtgaaaac catgtcgcgg atacccagtt gctcaagcgt
     6181 ctcaaccacc acattacgcg cggtagtttt gcctgcgcct tccagcccct caatgacgat
     6241 atacttactg cgcatttttt tccttaagca ctttcagata atcctgcaca gacttgttat
     6301 ggctggcaag attggtatta aacgtgtgac cacctttacc atcggccaca aaatagagat
     6361 acggcgtttt tgccggatgc gcagcagcct tcagcgaatc cgcccccggc gtagatatcg
     6421 cacctggcgg caaaccggta atggtatagg tgttatacgc tgtcggcgtt tccaggtctg
     6481 cacgagaaag tttgccatta taacgctctc ccatcccgta aatcacggtt gggtcggtct
     6541 gcaggcgcat accaatgcgt aaacggttga taaataccga ggcaacctga tcgcgttcac
     6601 tggcaacggc ggtttctttt tcgataattg atgccatcgt caccagctgg tttttatctt
     6661 tataaggcag gccgtccgca cgcccttccc aggcgctatc gaccgctttc accattttct
     6721 tgtgcgctcg cttgagtaac gcgacatcgg tggtattggc ggtatacatc caggtgtctg
     6781 gccagaacca accttcaatc cactccgggt tttccagttc aagtgcctgc gctacggtgg
     6841 cgtacttatc gtcactcagc gtgtgcttga tatacggagc ctcacgcaat tgcttgaggt
     6901 agtcgctcag acgcatccct tctaccagtc gcagcgggaa ctgtgcttct ttaccgcttt
     6961 ccagcaattt cagcatctcg cgcacggtca tctgcggtgt aaagcggtaa gtcccggctt
     7021 taaagtgaga aagatccggt tcgatacgca gcaaccattg aaaaacccgt gggcgattga
     7081 tgatcttatc ggcataaagc tgttcaccaa gcgccagacg tccggtccct ggcttcaggg
     7141 taaatatcgt ctcttctttg ataagcaatt tgctgtcggc aagatggcga accttccaga
     7201 cgcccacacc agcggcgata cccagtacca ccagcaataa caagataatc aataacactt
     7261 ttttcatgac taattcgggc gctcacaaag tggggctaaa tattcatata acgttgctga
     7321 cgaaaaggag acatcgccac aggcacgtac gggcatcact ggcattaacg cattacaaat
     7381 aaccatctca tctgcctgca acgcctcttc cagagaggct tgcacttcga caagctgata
     7441 agaggattgt gccagcaaac ggatacagaa ttgtcgcata atgccgttaa cacctgcctg
     7501 atccagtcgc ggcgtataaa ctacattgcc cttccgccag aacaaattag ccgcacagca
     7561 ttccgtaacc cacccttcgc tgtcaaggac cagcgcctca tcagcgtttg tctgctcaag
     7621 atgagagcgg atcaatactt gctcaagccg attaagatgt ttaatacctg caagatgggg
     7681 attgcgcccc agccgcaccg ggcttagcgc caacgtcatc ccttcgttac gcaaacggtc
     7741 gtaatgtgca ggataaaccg taacggagag aatccgcgtt gccggtccac tgttcaatgt
     7801 gctgtaccct cgcccgccac taccgcgact gatcacgact ttcagcacac cattttgctg
     7861 ttctgctgcc agcgttttca tctcttgttc aagctgaggc cagaagtcac agaaaatcat
     7921 caaccgctga caagcatcct gtagtcgctg gatatgcgcc gataacaaac tgactttacc
     7981 gtcgataact ctggcggtgg taaaacaacc atcaccaaac tgcgttgccc gatcgcttac
     8041 tgccagcgat tcctgcttat gaccgttaat taagaacata ccggctcctt atcagagaat
     8101 tgttagtgtg gcagcatgct cactacggaa caagtcggaa taaaagctaa gaaaaaaggc
     8161 ccgcaagcgg accttttata tgggtgggaa atgacaactt agatcttttt aaagatcaaa
     8221 gaaccattag tgccaccgaa gccgaaggag ttacacagcg tgtattccat tccgctgacc
     8281 tgacgtgctt catgcggtac gaaatccaga tcgcaacctt catccaggtt atccaggttg
     8341 atggttggcg gaacagcctg atcgcgcagc gccaggatgg agtagataga ctctactgcc
     8401 cccgccgcac ctaacaggtg accggtcata gatttcgtgg agcttaccaa cacacggctt
     8461 gcagcttcac cgaagatggc tttcaccgcc tgcgcttcag ctttatcgcc agccggcgta
     8521 gaagtaccgt gcgcgttaac gtagccaatc tgactcgctt caatgcctgc atcacgcaga
     8581 gcatttgcca ttgccagagc tgcgcctgcg ccattttctg gcggtgacgt catatgataa
     8641 gcatcgctgc tcataccaaa gccgacgagt tcagcgtaaa ttttcgcacc gcgttttttc
     8701 gcgtgttcgt actcttctag taccagcata ccggcaccat cgcccagtac gaagccatca
     8761 cgctctttat cccacgggcg gctcgccgct tgcgggttat cattgcgggt agataatgca
     8821 cgtgccgcgc caaaaccacc aacgcccagc ggcgtactgg ctttctctgc gccacctgca
     8881 accatcacgt cagcatcgcc atacgcgata atacgcgcag catgaccaat gttgtgcacg
     8941 ccggaagtac aggcggtcgc gatagagatg cttgggccac gcaggccata catgatagtc
     9001 agatgacctg ccaccatgtt cacaatcgtt gacggaacga agaatgggct gatcttacgt
     9061 ggaccaccgt tcatcagaga tgtgtggttt tcttcgatca gtccgaggcc gccaatcccg
     9121 gagccaattg cggcaccaat gcgggttgcg ttctcttccg ttatttcaag gccagaatcc
     9181 tgcatggcct gaacgccagc gacaattcca tattgaatga aggcatccat cttgcgctgt
     9241 tctttgcgcg agataatgtc ctcacagtta aaatccttta ctaagccagc aaatttcgtt
     9301 gcataggcgc tagtatcgaa atggtcgatt aggctgatgc cactctgacc ggcaagcaga
     9361 gctttccagg tagactctac ggtattgccg acaggagaca acatgcccag tccggtcaca
     9421 actacacgac gcttagacac gtttgtcctc cagggaggga aaaaatgatt ctagtgggac
     9481 aaaaagataa aactcaggcg gtcgaacgac cgcctggaga tgttcactta cgcctggtgg
     9541 ccgttgatgt aatcaatggc agcctgaacg gtggtgattt tctcagcttc ttcgtccgga
     9601 atctcagtat caaactcttc ttccagagcc attaccagct caacggtgtc aagagaatcc
     9661 gcgcccaggt cttcaacgaa agaagcattg ttggtaactt cttcctgctt aacgcccagc
     9721 tgttcgccga taattttctt aacgcgttct tcgatagtgc tcatactctt aaatttccta
     9781 tcaaaactcg ctttcgcgat ggttttcgta gtgtataaaa tgttgaaaaa tttgcaacta
     9841 aatcccggca ggtcttacca cgattttacg ttattttgag gccttacccc ccaataacgc
     9901 aaatcatttt gcactaatta ttactcataa ccacgcagac tgcgcgcaac atgagcattt
     9961 tgtgcaaatc gcggtcagac catgtacatc ccgccgttca catgcaaagt ttcacccgtg
    10021 atgtaagctg cttcgtcgga tgccaggaat gcaaccgcgt tggcgatttc ctgtgcgccg
    10081 ccgaggcgac ccgcaggaac ctgcgccagg atacccgcac gctggtcatc gctcagcgca
    10141 cgtgtcatgt ccgtttcaat aaagcccgga gcaacaacgt ttacagtaat accgcgtgac
    10201 gcaacttcgc gcgccagtga tttactgaag ccgatcaagc ccgctttcgc cgcagcgtag
    10261 ttggcctgac cgccatttcc catggtacca accacagaac cgatagtgat aatacgacca
    10321 tgacgctttt tcatcatagc gcgcattacc gcttttgaca gacggaaaac agatgaaagg
    10381 ttggtttcga taatatcgtt ccactcttca tctttcattc gcattaacag gttatcacga
    10441 gtgataccgg cattattgac caggatatcc acttcaccaa attctgcgcg aattttttcc
    10501 agaacagatt cgatagatgc cgggtcggtc acattcaaca tcagaccttt gccgttagca
    10561 cctaaataat cactgatcgc ctgagcgcca ttttcactgg tcgcagtgcc aataactttc
    10621 gcgccacggg ctgcgagcgt ttcagcaatt gcgcggccaa ttccgcggct tgcaccggtt
    10681 accagtgcga tttttccttc aaaattcatg attttcctct tttaaagctc gagcgccgct
    10741 gccatcgctg aaggttcgtt cagcgccgag gcggtcaggg tgtcgacaat gcgtttcgtc
    10801 aggccagtta gcactttgcc cgggccgact tcatagagat gttctacgcc ttgcgctgcc
    10861 atgtactcaa cagacttcgt ccactgaacc gggttataca actgacgtac cagtgcgtca
    10921 cgaatggcat caccattggt ttcgcatttc acatcaacgt tattcacaac aggaactgtt
    10981 ggtgcgttaa aggtgatttt cgctaattct actgccagtt tgtcggctgc tggtttcatc
    11041 agcgcacagt gagacggtac gctcactggt aacggcagcg cgcgttttgc gcccgcagct
    11101 ttacaggcag cgccagcacg ctcaaccgcc tctttatgac cggcaataac cacctgtccc
    11161 ggagagttaa agtttaccgg agaaacgacc tgaccttctg cagcttcttc acacgctttc
    11221 gcaatagacg catcatccag accgatgatt gccgccatag cgcccgtgcc ttctggtacg
    11281 gcttcttgca tgaacttgcc gcgcatctca accagacgca ccgcatcagc gaaatcaatc
    11341 acgccagcgc aaaccaacgc ggagtattcc cccaggctgt gaccggccat cattgccggt
    11401 gctttaccgc cctgctgctg ccatacgcga tacagcgcaa cagatgcagt caacagcgct
    11461 ggctgggttt gccaggtttt attcagttct tcagctggcc cctgctgggt cagcgcccac
    11521 aggtcgtagc ccagcgccgc agaagcttca gcaaacgttt cttcgacaat tggatagctc
    11581 gccgccatat cagccagcat tccaacggtt tgagaaccct gtccagggaa cacaaatgca
    11641 aattgcgtca tgttttaatc cttatcctag aaacgaacca gcgcggagcc ccaggtgaat
    11701 ccaccgccaa aggcttcaag cagaaccaac tgccccggct taatgcgccc gtcgcgtaca
    11761 gcttcatcca gcgcgcacgg gacagaggcc gcagaggtat taccgtggcg atccaacgtc
    11821 accacgacat tgtccataga cataccgagt tttttcgccg ttgcactgat aatacgcagg
    11881 ttagcctgat gcggaaccag ccagtccagt tgagaacggt caagattatt cgccgccagc
    11941 gtctcatcaa cgatgtgcgc cagttccgtt accgcaacct tgaagacttc gttgcccgcc
    12001 atcgtcagat gaattgaatt ctctggattc acgcggtcgg cgtttggcag cgtcagcaat
    12061 tcaccataac taccgtcggc atgcagatgg gtggagatga ttcccggctc ttcagaggca
    12121 gccagcaccg cagcgcccgc gccatcgcca aaaataataa tagtcccacg atctgttgga
    12181 tcgcaggtgc gcgccagtac atcggaaccg acgaccagag catacttcac cgccccagat
    12241 ttcacgtatt gattggctac gcttaatgca taggtgaaac ctgcgcaggc tgctgcaacg
    12301 tcaaatgccg ggcaaccttt aatgcccaac atgctttgaa tctgacaagc tgcgctcggg
    12361 aaagcgtgcg tagcagaagt cgttgccaca acgatcaggc caatctggtc tttctcaatg
    12421 cccgccatct caattgcgcg tgtcgccgct tcaaagccca tggttgaaac ggtttcgttt
    12481 ggcgcggcaa tgtggcgttc gcggataccg gtacgagtga caatccactc gtcagaggtg
    12541 tccaccattt tttccaaatc ggcgtttgtc cgcacttgtt cgggcagata gctgccagta
    12601 ccaataatct tcgtatacat gtacgctcag tcacttttcg gttatatacc gtcacttgca
    12661 aactgcgagt tcgctggcag cgtcctgcta ccgcagagtt ccgcttttgc caccgtccag
    12721 cagctcaaaa ccagctgggt atacagattc caggcgagcg gcaattcgct gaggaacttg
    12781 tcgctgcacc gcctgcactg cctgttcaat cgcgaccgca aaagctcgct gattggctgc
    12841 accatgactt tttatcaccg tgccgcgcaa tcctaacaga caggcgccgt tatactggtc
    12901 ggggttgagg tgactgaatc gcctcgtcag gctcttttgt agccaacgct ttaataacag
    12961 tagccaccac gaccgttttt tcccttcacc ctgagatttc agcagagaaa ggaacatcct
    13021 gacaacacct tccatcgtct ttaacgtgac atttcctgta aagccgtcac aaaccagcac
    13081 atctgtcttg ccagttaaca actcattggc ttcaagatag ccgatataat tgatagaagg
    13141 gattgtttta agcaccgctg aggcatcccg aatactgtcg agacccttta cttcttcttc
    13201 accaatattg agcaacgcca cgcgaggatt gggaatttcc accacctctt cagccagaac
    13261 tgagcccata atggcaaatt gcaccaacat tgtgctgtca caatcgacgt tggcccctaa
    13321 atcgaggacc accgttttgc ccttttgctg atgtggtaat accgtcacca gcgccggacg
    13381 ctcaatcccc tccaggggcc tgagtaataa ttttgccagc cccatcagtg ccccggtatt
    13441 accggcactg acacaggctt gcgctcgacc ttctttcacc agctccaggg ccatacgcat
    13501 tgaactccca cgactagcgc ggatagcttg cgaaggccgg gcatcactgg cgataactga
    13561 ctgcgcagga ataatctgca gacgcgaacg ttgttcaaag tcagctttag caagtaatgg
    13621 cgtgatggcg tcgggattgc cgactaaaag aagagtgagt tgcgaattag aattcagtgc
    13681 ctgcaatgct gcaggcactg tcacggaagg gccaaaatcc cctcccatga catctaacgc
    13741 cagggttaga cgtgtcaagg tatcgtcgcc gcccggtttg gtctttcccc agttgcctgg
    13801 ggaaaatcct cactaagctt catcacgcag acgcgtgatt acttagcgat gaccttgcgg
    13861 ccgcggtagt aaccgtcggc agtgatatgg tgacgcaggt gtttttcacc agaagttttg
    13921 tctacagaca ggctggtgac tgcggtcagc gcgtcatggg aacgacgcat gccacgtttg
    13981 gaacgggttg gtttattctg ttgtacggcc atggacctta ctcctcaatt acggtttatc
    14041 cccgatccaa cggggagcac caattactta cgctttaagc tggctaatac ggcaaatggg
    14101 tttggctttt gcacttcttc aggcagttca ccaaagacca tgtccgcttc ggacacttca
    14161 cagtgttcag aatcatgcac cggaactacc ggcaaggcga ggatgatttc atcttcaacc
    14221 attgcaagca gatcgatttc accgaattcg ttaacctcaa tcggttcata cgcttccggc
    14281 agtgcttcag cctgttcgtc tgaacgcaca ggactaaaac aatacgttgt gtagacctga
    14341 tgagtaaacg gcttcccgca acgctgacac tcgagcgtta ccgtcacctt cgcatcgccg
    14401 tttaacactg cgagacgttg gttatcgata gcgaacgaca tggagcattc cacatcactg
    14461 tccacactga ctacggattc ggcgacgcgc tcaacctgat caggggtata gataccctgg
    14521 taatcaaggc gtttttgagc cgtacgaacc ggatcgagag tcaggggtaa ttttaccttt
    14581 tgcatagggc gcgcatatta actttgtaac gtcatagagt caaagaaaaa ggcagcctgt
    14641 ggttgccttt tgccaataat tcgcacacat tgcgggttac tgctttattt tcgttcagtg
    14701 ctgataacga acatcaacct gcaaaacgaa gcgcatagtt taaaatggct atcatcaata
    14761 cgctatatct gatggaaaaa aatatgccta aacttatttt agcctccacc tcgccatggc
    14821 gtcgcgctct tctggaaaaa ctgcaaatct cttttgaatg tgcagcacca gaggtcgacg
    14881 aaaccccacg cagcgacgaa tcaccgcgac agttggtgct tcgactggca caagaaaaag
    14941 cgcaatctct ggcgtcacgt tatccggatc atttaattat tggttcagac caggtatgtg
    15001 ttcttgatgg cgaaatcacc ggtaaaccgt taacggaaga aaatgcccgt ctgcaattac
    15061 gcaaagccag cggcaatatc gtcaccttct atactggact ggcgttgttt aattcggcga
    15121 atgggcatct acaaacagaa gtggagcctt ttgacgtcca tttccgtcac ctgtgcgagg
    15181 cggagattga taattacgtg cgtaaggagc atcccctgca ctgcgcgggt agctttaaga
    15241 gtgaaggatt tggcattacg ctgtttgagc gtttagaggg acgtgaccct aacacgctgg
    15301 ttggtttacc gctaatcgcg ctgtgtcaga tgttacgtcg ggaagggaaa aacccgctga
    15361 tgggatagtt gtttgcgccg gatgcggtta cgtcgcatcc ggcaatcggt gcaggcggcc
    15421 tgatgcggcg taaacgcctt atcaggccaa ccgcccatta tcaggcttat atgcttgtat
    15481 tagcgcgcgt tacgcagctt ttgcaaacaa cgcttcaaac cttcatccat cggcgcttcg
    15541 atacgcatca cctcaccggt ccccggatgg gtaaacttca acgctgcggc gtgcaggaac
    15601 agacgattta atcccgtgcc tgcttcagtg agctgtctgt caaattcacg gtcaccgtag
    15661 cgatcgtcaa aggcaatcgg atgacccgca tactgtgtat gcacacggat ctgatgagta
    15721 cgtccggtta ccgggctaca acgcaccagg gtggcaaatg catagcgttc ttccacttta
    15781 aagcgtgttt ccgacggttt gccttcctga ctgacacgca cgatacgttc gccgctttgc
    15841 agaatatttt tcaataacgg cgcttgaacg ctcttcacat gcgactgcca ctgactgcgc
    15901 accagcgcca ggtaatcttt ttgcattcct ttttcacgta attgctcatg cagagaacgc
    15961 aacgccgagc gttttttcgc taccagcaac acacctgaag tgtcccggtc gagacgatga
    16021 accagttcaa ggaaccgcgc ttccgggcgc aacgcccgca aaccttcgat aacgccgaag
    16081 cttaaaccac tgccgccatg taccgccgta ccggaaggtt tattcagcac caggatatga
    16141 tcatcttcat ataagatgac gtccgccagc gccgccacct tttgcagatg tggcgaaacc
    16201 gcctcttctt cccgctcagc aacgcgaacc ggtgggatac gcacctcatc acccgcttcg
    16261 agtttatatt caggcttaat acgttttttg ttcacccgca cttcgccttt acgcaaaata
    16321 cggtaaatca tactttttgg tacgcctttc aattgggtac gcaaaaagtt gtcgatacgt
    16381 tgccccgctt cgtcagcggt gatagcaaca atttttacgg atggagtctc tgttttcatg
    16441 gtgggcgatt ctaattagcc aacaggattc gcgccactca tttttctatg cttatattta
    16501 gttttacacc ttattacttc actacgtgat cactttattg atggttatta aaccaatcac
    16561 cagcaagaag tgaaaaatgt aatgaacgca tcccacacaa ttaaacacgg agcagtatga
    16621 tggttaaaag ggtgaaactg gcaggtgtgg agcctcgcag atttccggca tcatagtgcc
    16681 caatacggga tgcataaagc tccctcagac tggagactcc acaaatgaaa tatacaccgg
    16741 ttggcgttgg tatcgcaaaa catgtcattc agattcactt catcaatgag cacacag
//
LOCUS       DADMIB010000091        16521 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.091, whole genome shotgun sequence.
ACCESSION   DADMIB010000091 DADMIB010000000
VERSION     DADMIB010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16521
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.091"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            95..2323
                     /gene="crfC"
                     /locus_tag="JNZ89_002695"
     CDS             95..2323
                     /gene="crfC"
                     /locus_tag="JNZ89_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clamp-binding protein CrfC"
                     /protein_id="HAY8936516.1"
                     /translation="MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAAQLAL
                     PWSQPNIAERYAMLNNELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPM
                     TALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRAL
                     MQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVE
                     FVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISD
                     EEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTLMKGCITPQQIFPVS
                     SMWGYLANRARYELANNGKLPAPEQQRWVEDFAHAALGRRWRHADLADLEHIRHAADQ
                     LWEDSLFAQPIQALLHAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACEQ
                     LRQNIHQVEESLQLLQLNQAQVSGEIKHEIELALTSANHFLRQQQDALNAQLAALFQD
                     DSEPLSEIRTCCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQVKMELS
                     ESGFRPGFHFPVFHGVVPHVNTRQLFSEVISRQEATDEQSTRLGVVRETFSRWLNQPD
                     WGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKVLAEQVDESVTAGMNTFFAEFAS
                     CLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHGWIYTDAQLLRDDIQTLFTAE
                     RY"
     gene            2320..3203
                     /locus_tag="JNZ89_002696"
                     /pseudo
     CDS             2320..3203
                     /locus_tag="JNZ89_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418534.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3467..4969
                     /gene="proP"
                     /locus_tag="JNZ89_002697"
     CDS             3467..4969
                     /gene="proP"
                     /locus_tag="JNZ89_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709830.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline transporter ProP"
                     /protein_id="HAY8936517.1"
                     /translation="MLKRKKVKPITLRDVTIINDSKLRKAITAASLGNAMEWFDFGVY
                     GFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT
                     IVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRK
                     RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLR
                     HALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKYWRSLLTCIGLVIATNVTYY
                     MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVA
                     LFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA
                     FNISVLVAGLTPTLAAWLVESSQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGAT
                     PAASDIQEAKEILVEHYDNIEQKIDNIDHEIADLQAKRTRLVQQHPRIDE"
     gene            5035..5172
                     /gene="pmrR"
                     /locus_tag="JNZ89_002698"
     CDS             5035..5172
                     /gene="pmrR"
                     /locus_tag="JNZ89_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxT activity modulator PmrR"
                     /protein_id="HAY8936518.1"
                     /translation="MSDAHTLLQVNGGECNEKPCLYESLTTVFSVLVVSSFLYIWFAT
                     F"
     gene            complement(5148..6248)
                     /gene="pmrB"
                     /locus_tag="JNZ89_002699"
     CDS             complement(5148..6248)
                     /gene="pmrB"
                     /locus_tag="JNZ89_002699"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PmrB"
                     /protein_id="HAY8936519.1"
                     /translation="MNLMRFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQI
                     QLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQ
                     KELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTP
                     LAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLE
                     DVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGS
                     NIMIKLQEDGGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQL
                     HHGQFFLQNRQETSGTRAWVRLKKDQNVANQI"
     gene            complement(6249..6917)
                     /gene="basR"
                     /locus_tag="JNZ89_002700"
     CDS             complement(6249..6917)
                     /gene="basR"
                     /locus_tag="JNZ89_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BasR"
                     /protein_id="HAY8936520.1"
                     /translation="MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEAGH
                     YSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKP
                     FALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSR
                     LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYMLVA
                     NEEN"
     gene            complement(6914..8557)
                     /gene="eptA"
                     /locus_tag="JNZ89_002701"
     CDS             complement(6914..8557)
                     /gene="eptA"
                     /locus_tag="JNZ89_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase EptA"
                     /protein_id="HAY8936521.1"
                     /translation="MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDS
                     LHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDR
                     SMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGAN
                     ILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVR
                     IGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTV
                     SCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACD
                     RVPHQNVTALNLPGQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNR
                     YPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSL
                     VYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQ
                     TQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSK"
     gene            complement(8661..9998)
                     /gene="adiC"
                     /locus_tag="JNZ89_002702"
     CDS             complement(8661..9998)
                     /gene="adiC"
                     /locus_tag="JNZ89_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HAY8936522.1"
                     /translation="MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIY
                     GWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
                     AMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI
                     PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVK
                     NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTPGA
                     IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILM
                     TIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT
                     IAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD"
     gene            complement(10135..10896)
                     /locus_tag="JNZ89_002703"
     CDS             complement(10135..10896)
                     /locus_tag="JNZ89_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8936523.1"
                     /translation="MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNI
                     IDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAA
                     QHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIH
                     KDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQ
                     SCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA"
     gene            complement(11221..13488)
                     /gene="adiA"
                     /locus_tag="JNZ89_002704"
     CDS             complement(11221..13488)
                     /gene="adiA"
                     /locus_tag="JNZ89_002704"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418541.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HAY8936524.1"
                     /translation="MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDG
                     FAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMD
                     RDLLELVDEFAWILEDTTDFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP
                     GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVF
                     GADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSR
                     NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQ
                     DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS
                     QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEV
                     IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQD
                     YWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRH
                     GIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPD
                     TYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEITPREAYNAIVDNNVELVSI
                     ENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEG
                     TEIIDGIYHAMCVKA"
     gene            complement(13687..14595)
                     /gene="melR"
                     /locus_tag="JNZ89_002705"
     CDS             complement(13687..14595)
                     /gene="melR"
                     /locus_tag="JNZ89_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MelR"
                     /protein_id="HAY8936525.1"
                     /translation="MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWH
                     GQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL
                     FLSWPLDKDLINHVTHGMMIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM
                     LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK
                     LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS
                     TFGKYVGMSPQQYRKLSQQRRQTFPG"
     gene            14878..16233
                     /gene="melA"
                     /locus_tag="JNZ89_002706"
     CDS             14878..16233
                     /gene="melA"
                     /locus_tag="JNZ89_002706"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HAY8936526.1"
                     /translation="MMTAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPT
                     RLEESHIVVRKLMDSAGASGKITCHTQQKEALQDADFVVVAFQIGGYEPCTVTDFEVC
                     KRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATLLNYVNPMAMNTWAM
                     YARYPHIKQVGLCHSVQGTAEELARDLNIDPSTLRYRCAGINHMAFYLELERKTADGS
                     YVNLYPELLAAYEAGQAPKPHIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
                     IKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKNASRIDIKPSREYASTIMNA
                     IWTGESSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTN
                     INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLH
                     R"
     gene            16336..>16521
                     /locus_tag="JNZ89_002707"
     CDS             16336..>16521
                     /locus_tag="JNZ89_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418544.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HAY8936527.1"
                     /translation="MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
                     GTLFLVARIWDAINDPIM"
BASE COUNT         3987 a         4001 c         4348 g         4185 t
ORIGIN      
        1 tatttcttgc agtaattata aaagccgaaa acagaactca aaaacaatct ggctaaataa
       61 aagtaacaaa atttgcttta aggaagaatt ttctatgtac acacagaccc tgtatgagtt
      121 aagtcaggag gctgaacgcc tgttacagct ttctcgccaa cagttgcagt tactggaaaa
      181 aatgcctctc tctgtacccg gagacgatgc ggcacaactg gctttaccct ggagtcagcc
      241 taatatcgcc gaacgttacg cgatgctgaa taatgagttg cgtaaaattt cccgactgga
      301 aatggtgctg gcgattgtcg gtactatgaa agcagggaaa tcaaccacca ttaatgccat
      361 tgttggtacg gaggttctgc ctaatcgtaa tcgcccaatg actgcgctgc cgacgcttat
      421 tcgccatacg cccgggcaaa aggaaccggt actgcatttt tcacatgtcg cgccaatcga
      481 ttgtttaatt caacaattac aacagcgcct gcgtgattgc gatattaagc atctgaccga
      541 tgtgctggaa atagataaag atatgcgtgc gcttatgcag cggatcgaaa atggcgtcgc
      601 tttcgaaaaa tattatctgg gtgcccagcc tatttttcat tgtctgaaaa gtttgaatga
      661 tttagtgcga ctggcgaagg cgctggacgt cgattttcct ttttctgctt acgccgccat
      721 tgagcatatt cccgtgattg aagtggagtt tgtccatctg gcggggctgg aaagttatcc
      781 cggtcagttg acgttactgg atacccccgg gccaaatgaa gccgggcaac cgcatctgca
      841 aaaaatgctt aaccagcagc tggcacgcgc ctcggcggta ctggcggtgc tggattatac
      901 gcaactgaaa tcgatctccg atgaagaggt ccgtgaggcg attttggcgg tggggcaatc
      961 ggtgccgctg tatgtgctgg tcaataagtt cgatcaacag gatcgtaaca gtgacgacgc
     1021 cgaccaggtg cgggcactga tttccgggac gctgatgaaa ggctgtatta cgccacagca
     1081 gatatttccg gtgtcgtcga tgtggggcta cctggcgaat cgggcgcgct atgagttagc
     1141 caacaacggt aagttaccag cgccagagca acaacgctgg gtggaagatt ttgcccatgc
     1201 cgcgctcggc aggcgctggc gtcatgccga tctggcggac ctcgaacata ttcgtcatgc
     1261 tgccgatcag ttgtgggaag attcgctgtt cgcccagcca attcaggcgt tgcttcatgc
     1321 cgcttacgct aacgcctcat tgtatgctct gcgatctgct gcgcataaac tgttgaatta
     1381 cgcgcagcag gcgcgggaat acctggattt tcgtgcgcac gggttaaacg tcgcttgtga
     1441 acaattgcgg caaaatatcc atcaggtcga agaaagtttg cagctattgc aactcaatca
     1501 ggcgcaggtg agcggcgaga ttaaacatga aatcgagctg gccctgacct ccgccaacca
     1561 ctttctgcgt caacagcaag atgcgctgaa tgcgcagtta gccgccttgt ttcaggatga
     1621 ttcggagccg ttaagcgaga ttcgtacctg ctgtgagaca ctgttacaga cggcgcagaa
     1681 caccatcagt cgcgacttta cgctgcgttt tgccgagctt gaatccaccc tttgccgggt
     1741 gttaaccgat gttattcggc ccattgagca acaagtcaaa atggaattga gcgagtcagg
     1801 gtttcgtcct gggtttcatt ttcctgtttt tcacggagta gttccccacg tcaacactcg
     1861 ccagctgttc agtgaagtca tttcgcgcca ggaggcaacg gacgagcaga gcacgcgttt
     1921 aggcgttgtg cgtgagactt tttcgcgctg gttgaatcag cccgactggg gacggggaaa
     1981 tgagaaatcc ccgacagaaa cggttgatta cagtgtgttg caacgagcat taagcgcaga
     2041 agtcgatctt tattgccaac aaatggctaa agttctggca gagcaggtcg atgaatctgt
     2101 tacggcaggc atgaatactt ttttcgctga gttcgcttca tgtttgacgg aattacagac
     2161 gcgtttacgc gaaagcctgg ctctgcgtca acaaaatgaa tcggtggtca ggctgatgca
     2221 gcagcaattg cagcagactg tgatgactca cggctggatt tacaccgacg cccagctgtt
     2281 acgcgatgat attcaaacac ttttcacggc agaacgatat tgaccaagac gttactggac
     2341 ggccccggtc gcgtgctgga gtcggtttat ccccgctttt tagtggatct ggcgcagggc
     2401 gatgatgccc gccttccaca agcccatcag cagcagtttc gtgaacgact gatgcaggaa
     2461 cttctttcgc gtgtgcagct tcagacatgg acgaacggcg gcatgttaaa tgcgccgctt
     2521 agcctgcgac tgacaatggt ggaaaaactg gcgtcgatgc tggatcccgg tcatctggcg
     2581 ctgacgcaga tcgcgcagca tctggcgctg ctgcaaaaaa tggatcaccg ccagcactct
     2641 gctttcccgg agctccccca gcaaattgcc gccttgtatg agtggttttc agcccgttgt
     2701 cgctggaagg aaaaggcgtt aacgcaacga ggccaggcct actggtgcag gcaggtgatc
     2761 agagcgagca aatttttacc cgctggcgtg ctggggcgta taacgcctgg tcgttgcctg
     2821 ggcgctgttt tatcgttctc gaagagttgc gttggggggc atttggcgat gcctgtcgtc
     2881 tgggaagccc gcaagcggtg gcgttgctgc tgggtgattt gcgcgtgaaa gcgacacaac
     2941 atctggcaga gagtatcaat gcggccccga ccacgcgtca ctattaccat cagtggtttg
     3001 cctcttcgac cgttctgacg ggcggggatc atgctgattt tttaagttgg ctgggaaagt
     3061 ggaccacggc agataaacaa cccgtttgct ggtcagtgac ccaacgttgg caaactgtcg
     3121 cgctggggat gccacgactc tgttcagcgc agcgtttggt gggggcaatg gtcgaggaaa
     3181 tcttctctgt aaatttggcg taaataatca gttacatcaa tgagtcctaa acgaaatcca
     3241 tgtgtgaagt tgatcacaaa tttaaatact ggtagggtaa aaaggtcatt aactgcccaa
     3301 ttcaggcgtc aactggtttg attgtacatt ccttaaccgg agggtgtaag caaacccgct
     3361 acgcttgtta cagagattgc atcctgcaat tcccgctccc cttttgcggc cgtcgcgctg
     3421 atttttctgg cgtttgcgga aatgggccaa ctctgcgagg aaagctatgc tgaaaaggaa
     3481 aaaagtaaaa ccgattaccc ttcgtgatgt caccattatt aatgacagta aactgcgtaa
     3541 agccattacc gcagcatcac tgggtaatgc aatggaatgg ttcgattttg gtgtttatgg
     3601 ttttgttgct tacgcattag gtaaagtttt tttcccgggg gctgacccca gcgtgcagat
     3661 ggttgctgca cttgccactt tctccgttcc ctttctgatt cgaccgcttg gcggactctt
     3721 ctttggtatg ttgggcgata aatatggtcg ccagaagatc ctcgctatca ctattgtgat
     3781 tatgtcgatc agtacgttct gtattggctt aataccgtcc tacgacacga ttggtatttg
     3841 ggcaccgatt ctgctgttga tctgtaagat ggcacaaggt ttctcggtcg gcggtgaata
     3901 taccggggcg tcgatatttg ttgcggaata ctcccctgac cgtaaacgtg gctttatggg
     3961 cagctggctg gacttcggtt ctattgccgg gtttgtgctg ggtgcgggcg tggtggtgtt
     4021 aatttcgacc attgtcggcg aagcgaactt cctcgactgg ggctggcgta ttccgttctt
     4081 tattgctctg ccgttaggga ttatcgggct ttacctgcgc catgcgctgg aagaaactcc
     4141 ggcgttccag cagcatgttg ataaactgga acagggcgac cgcgaaggtt tgcaggatgg
     4201 cccgaaagtc tcgtttaaag agattgccac taaatactgg cgcagcctgt tgacatgtat
     4261 tggtctggta attgccacca acgtgactta ctacatgttg ctgacctata tgccgagtta
     4321 tttgtcgcat aacctgcatt actccgaaga ccacggggtg ctgattatta tcgccattat
     4381 gatcggtatg ctgtttgtcc agccggtgat gggcttgctg agtgaccgtt ttggccgtcg
     4441 tccgtttgtg ctacttggta gtgttgccct gtttgtgttg gcgatcccgg cgtttattct
     4501 gattaacagt aacgtcatcg gcctgatttt tgccgggtta ctgatgctgg cggtgatcct
     4561 taactgcttt acgggcgtta tggcttctac cttgccagcg atgttcccga cgcatatccg
     4621 ttacagcgcg ctggcggcgg catttaatat ttcggtgctg gttgccggtc tgacgccaac
     4681 actggcggcc tggctggtcg aaagctcgca gaatctgatg atgcctgcct attacctgat
     4741 ggtagtggcg gtgattggtt taatcaccgg cgtaaccatg aaagagacgg caaatcgtcc
     4801 gttgaaaggt gcgacaccgg cggcgtcaga tatacaggaa gcgaaggaaa ttctcgtcga
     4861 gcattacgat aatatcgagc agaaaatcga taatattgac cacgagattg ccgatttgca
     4921 ggcgaaacgt acccgcctgg tgcagcaaca tccgcgaatt gatgaataag ctgaaacgga
     4981 tggcctgatg tgacgctgtc ttatcaggcc aattgaactc ttaaggttca cttaatctct
     5041 gacgcgcata ctctcctcca ggttaacgga ggagagtgca atgaaaaacc gtgtttatat
     5101 gaaagtttaa ctaccgtgtt cagcgtgctg gtggtcagca gctttcttta tatctggttt
     5161 gccacgttct gatctttctt cagccgtacc caggcccgcg tgccggaagt ctcttgccgg
     5221 ttttgcagga aaaactgccc gtgatgcaac tgtgtaatgc ggctgacaat acttaacccc
     5281 agaccaatcc cgccataacg gctgtccata cgtacaaacg ctttactcaa ctccccgcat
     5341 ttactctcat caatacctgg tccttcatct tcaactgcca tgaccgctcc gccatcttct
     5401 tgcagcttaa tcataatgtt gctgccttgc gggctgtaac gatgggcgtt ttctaccagg
     5461 tttcgcaata acatccgcag cagggttgca tcaccctgaa cggtgatgtc ggcggcgctc
     5521 tctggcaata gcagggtttg ctgtcgctgg tcgagcatgg tactgagttc gtcatacgag
     5581 gggagaatga catcttccag cagttttaca tgttgataat taccggaaga aaatgactgt
     5641 ccggcacgcg ccagttgcag cagctgggag acgctctcca tcatctgatc aagccgtgcc
     5701 actaacggtg ctacatcaat gtgatgcgtt ttcgccagca gttccagatg caaacgcacc
     5761 cccgccagtg gcgttcgcag ttcgtgcgcg acgtcagcgg taaacaacct ttcgttatcc
     5821 agcgtgctgg tcaggcgact gaccagatcg ttcaacgccg aaaccaccgc ttcgatttcg
     5881 agggtggcgc tgtgaatggc aatgggcgtt aagttgtcgg cagtgcgcgc ttccagctct
     5941 ttttgcagct ccgccagcgg gcgggtgatg cggcgtaccg cctgatagca gataaatagc
     6001 gtcaggctga ccataaagac gccggggaca atcaggctgg cgaccgcctc gcggatctca
     6061 cgcatgatgt ggcgatcgtt gttgcgattg tcgcgtagcg cctgctcaaa cagctgaatc
     6121 tgctcggtac tttcatgcca tagccagaag acgctgatca gctcaaacac caacaaaatg
     6181 gccccgatag tcaatatcag ccgttggcgc agcgatattg gtcggcgcag aaaacgcatc
     6241 agattcaatt agttttcctc attcgcgacc agcatatagc caaagccgcg cacggtgcgg
     6301 atacgggatt tgcccacttt gtcgcgcaga ttgtggatat gcacttccag ggtgttggtc
     6361 gagggttcat tgtcccagtt atagatgtcg ttgtagagaa tttcccgatg taccggactg
     6421 cctgctttga gcattaaccg tgacagcaga gcatattctt tgggcgtcag aatcaactct
     6481 tcaccgccca tccatacctg acggcgaccc atattcagcg tcagattgcc aacaatcagc
     6541 tcactttcgc cctgattatt atggcgtcgt agcagggcgc ggatacgggc gtgtaactct
     6601 tccagcgcaa aaggcttcac cagatagtca tcggcaccga catccagccc ggcgattttg
     6661 tcggtcagcg tatcgcgagc ggtgaggatc agtaccggca gggtatattt tttctgccgg
     6721 atacgggcga gaaaatgcag tccatcttcg tcgggtaacc ctaaatccag taccaccagg
     6781 ctgtaatgac cggcttcaag gctttgttcc gccatccgcg cggttgtcac gccatcgcac
     6841 gcgtagcctt cggtttgcgc cgccagaatc agtccctgca ataacagcgt atcgtcttca
     6901 acaatcagaa ttttcattta ctcactctcc tgcaagtttg cagaatatca tccgcagcct
     6961 ggtaatactt cgtctcaacg ccagttaatc ccaatagcgt ggagaataaa ttgtcttgtg
     7021 aatagtgttg cgtttgcgcc tgtttttgca ggcagttctg gtcaacctga taccgttttt
     7081 gataatcctc cgacagccac agcagcatcg gcacctgttt ttggctatcc ggggcgatgg
     7141 cataaggcag accgtgcaga tagatgccat tttcacctaa cgattcaccg tggtcagaaa
     7201 gataaaccag gctggtggta aatttatcct gatgttcttt cagcagatta atcgctttat
     7261 caacaatata gtcgacgtaa accagcgtgt tgtcgtaagt gttcaccagt tgctctttgg
     7321 tacaggtctg gatctcattg gtgtcgcagg ttggggtaaa tttcctgaac tgcggcggat
     7381 agcggttgta ataggtcgga ccgtggctgc cgatggtgtg taagacaatc acgccatcac
     7441 cctgcaggtt attgatgtac tcttccagcc cgtggaacag cacttcgtca tagcattcgc
     7501 cgttgatgca ctgaccaggc agattcagcg cggtgacgtt ctggtgaggc acgcggtcgc
     7561 aggcaccttt acagccgcca tcgttgtcat tccacagcac gttgatgccc gctcgctgaa
     7621 tgatatccag cacgccttcc tggtgctgtg ccagctcttc tttgtaatgc tcacgcggca
     7681 tatccgagaa catgcacggt actgaaactg ccgttgccgt gccgcaagat acggtattag
     7741 ggaaatagac cacgttatct ttcgccagcc gcgggttagt ttcacgcggg tagccgttga
     7801 gggagaagtt ctccgcccgc gaggtttcgc cgacaatcag gatggtcaaa tttttacgtt
     7861 tttcgttctg cattaacggg ttgcggtggg cgtcttcacc aattcgcacc agcggtagat
     7921 ttgccagtcg ctgatgggag taccatgacc agctggcaac aatgctgtta gaggggctta
     7981 aggatttcac cagctctttg ttattgcgga acaacgaggc gtagtcttta taaaacagtg
     8041 cggcgaccag caaaatcagt agtacagaaa ccagaatatt ggctccacgg aaaagaacac
     8101 tgcgcagacg cgaggtggca ggtttgattt ttatccagca ggcaatcagc gcagcaagca
     8161 cgccgctgaa tcccagcgtt aataacattt gcggtgtcat cagcgcataa ctttctgccg
     8221 gagtggtatc aataatattg gcaatcatcg agcggtcgat gacgatgccg taagtcatta
     8281 tgaaatattg tgcagccgcg ccaaccagaa taaacaggca ggccagtggt cgattaagcc
     8341 ataagaaaga gcttagtgtc aggacaatat taatcacgct gaaagcgacg accggcatcg
     8401 acaagaaaac cagtacgtta tgcagcgaat ccagcggcag cgcctgcaac acctgtttaa
     8461 aaaaggcaat attcaggcag atagagatat aaaaagcggc caacaatagc caggcgagta
     8521 aattcaaaga gggtcttttt agtaggcgct tcaacatcac ggtgtttcca tcgaacaaag
     8581 tgcgcatatg ctcgcaaagc aaaattaagc caaccttaag ttcttaaggt tggcttttat
     8641 gtttgctgga ttaaggggaa ttaatctttg cttattggtg catctaaggg atacgggttt
     8701 ttatgtagcc ggttgtaatt cagcgcatac atggcggtga tgaccatcag ggtgacaaat
     8761 gaccacataa cctctttcgc tccggacccc accacggccc agatgcagta gaggaaggca
     8821 atggtagtaa ctgccagata tgccgggcgt gctttaccaa agtgaccgtg tccgagcagc
     8881 agtaacgccg cacaggtgta aagatatggc accagtgtaa agatgaccga gacggaagaa
     8941 accagaccga actctttggt cgcgtttggt gaaatgctgc tgagctggaa gatggtcatc
     9001 aaaataccga cgataatcag ccccgccact ggcgtacccg ctttatttac acgggcaaaa
     9061 atcggtggga acagtccgtc atcggcagcg gctttcgccg tttgacccgc cagcaacgtc
     9121 cagccgccca gtgaacctaa gcaacccgca gctgcgcaga aggaaacaat ggccccgggg
     9181 gtgtcaccca acgccatccg tgcggcatca ccgaatggcg aagcagaaac gcgcagtgcg
     9241 gcattaggga tcatccccat aatcgcggtg gtagaaagta catagcaaac ggcggcaatc
     9301 aataccccac caatggtggc gatagggaca ttgcgtttcg ggtttttcac cacacctgcg
     9361 gcaacggagg cactttccac accgatgaac gaccacagcg taacgttaag ggtactttga
     9421 attgcaccga aggtacccag gccgctgacg ttccatgccg ccatataggt ttcaccacgg
     9481 aaccagaacc agccaaatac ggcaatcccg acgatgggga tcagcgccag cacggtggca
     9541 actgcctgca cacgggtgat cattttcgga ccaacaatgt tcagcaggac gaagatccac
     9601 agcaccacga cgcaggtgat ggttaatacc aatggatctt tcagaatcgg gaagaagtaa
     9661 cttaaatatc ctacgccaat gaccaccatg gcgatattgc cgatccagca ggccagccag
     9721 tagaggacgt tggtttgata accgagaaac gggccaaagc agcggcgggc gtaagcgtaa
     9781 gaaccaccag gacttgggtc gaggaacgac attttggcgt ataccatcga gagccccagt
     9841 gcaccgataa tcgtcaccaa ccatccataa atggcaatcc cgccagtgga ggccaggttt
     9901 gcaggtaaca gaaaaacacc tgaccccata atattccccg acaccatcag ggtgacgggg
     9961 attaagccca ctttgtgagc atcagcatcc gaagacataa ttaaactcct gcgaaggcga
    10021 gcttcgtgac aataaattac gtcatatcat acgcctgcat tcgatagttg aattattatc
    10081 gaccgggtta tcgctgatgc cgttattaat atagctcttc gttaaggtta aaaatcaggc
    10141 gacagtgcgt tctctgtgct gactaacata atgcagcggc gtcataccgt agaagtcttt
    10201 aaagacagaa ataaagtacg acgtactgtt gtagccgcag gactgtgata cctgagagat
    10261 atttttaccg tccatcatta attcatttac ggcataacgc atgcggcagg tggtgattat
    10321 ttggctataa ctggtgtttt cgcttttcag ctttttcttt aacagacttg ggctaagaca
    10381 taaacaactg gctaccatac taagattcca gtctttgtga atatcgcttt caataatttg
    10441 ataaacgctg tcacttacac aattacgtaa catatacatc attaatgaaa ggaatttttt
    10501 actgtcgaga aaacgggata gcaccgtgaa taataatgcg cgtgttcgtt ccttttctga
    10561 ctcagtttct gcgggcatca tgctgtgttg cgcggcaacg cgaaagacgt ctggcgtcag
    10621 gcatggcagg gtgagtatgg gcgtagcgct acgttgccat actggtattt gcgagagatc
    10681 tttattcaga aaccggaggt aatctttgat gatgtcgtga ctaatatgag caaccaaagt
    10741 gttgttaaga gaggagacgt cgataatatt attttcacaa tttaataacg ccatatggtt
    10801 agctttaagg ctaataggtt ctttcccatt cacccttatc cagacatctt tttcagtcaa
    10861 taaaacaata caaggttggt cgctgcaaat cctcatacat gtactcctga gtgcgaataa
    10921 aagaccagtt ctcgctaaag caaagcgata ccgagaaatg gttgtataat tgtatgacga
    10981 atataaacat gcataaaaat aacgagtttt actaatatta caaattttta tagtaatttc
    11041 tcatgtacat atttttttac agggtaaata acaggcaaaa aaaagcgcgg ggtggggccg
    11101 cgcaaaaagt atgacatttt tgtttgcagc aatttttatg aaaacgttgc catactcaaa
    11161 aggcctaagg ccaggcggcg taatgttatt taaacaatta cgccttcagc ggaatagtgg
    11221 ttacgctttc acacacatag cgtggtaaat accgtcaata atttcagtcc cttcagtttc
    11281 gtgttcaaat ccagggaaat ggtggtccca ggattgcagc gagcgtaaat aacttacttg
    11341 cggactgttt ttatcgccga agttttcacc agacagcagc atcgggattc ctggcggata
    11401 tgggataact gagtttgccg cgatgcgtcc tggcagattt tcaatggata ccagttcgac
    11461 attgttgtcg acaatcgcgt tgtacgcttc acgcggggtg atttccgcca ccggcaggcc
    11521 ggaataggct tcgttcaacc gtgcgccagg gttgttttct ttcagccagg caaacatggt
    11581 gtcacccaga tcgtgaatcc ccatgttcgc gtaagtgtca ggatattgtt caacaagttc
    11641 cggcatcacc tgcgccagcg gtgtgttggc gtcatagtgg cgtttgaagg agcaaagggt
    11701 gttaaccaga gtcccccatt tcccacgggt tacgcccata gagaacagga acataatttg
    11761 gaagtcagtg gtgcgggtag gcacaatgcc gtggcgacca agccaggcag tgaccagcgc
    11821 cgccggaaca ccggtttctt ccagttcacc atcttcaccc attcccggag caaggatgct
    11881 gactttaatc gggtcgagca tactccagtt atccggaata tctttgaagc cgtgccagct
    11941 ttcgcccgga tgcattaccc agtagtcctg aacggtggtc agcagtttgg ttggtgcgtc
    12001 agcaaagtca taggttttgc cggtttgtgg gtcggtgacg acttctttgt tccacggttt
    12061 gaagaaccag ctaccgtcag cggtgaactc tttatacagc cgcgccatcg cctgacggaa
    12121 atcaaccgct tcgtcgatca cttcctgcgt cagtgacagg ccgctgttgc cgtccatcat
    12181 cgacaccgcc acgtcgttgg atgcgcagat ggcatacagc ggggaggtgg tggcatgcat
    12241 catgtaggcc tggttgaagc gggagaagtt aatcgcccca cgaccttcac gtacatgaat
    12301 ataagaagcc tgtgaaagcg cattcagcag tttgtgggtg gagtgggtgg cgaaaacggt
    12361 aggaccgttg tgatcgccag gttcgccgcg catggcatag tgatcggcat agatcgggtt
    12421 gaaacgtgca tagccgtacc aggcttcgtc aaagtgcaga cgatcggagg ttttttccag
    12481 cagatcctgc gcttctttag cgttataaca cacgccgtca taggtgcagt tggtcaccac
    12541 gcagtaagac ggtttttgcc cggctttgtc tttagtcagc gggctttcac tgattttctt
    12601 ctgcaaggtt tcaggttgca tttcctgcgg atagattggc ccgataatgc cgtagcggtt
    12661 gcggcttggc accatgtaga ccggtttcgc gcctgtcagc atcaagcctt gttcgatgga
    12721 tttatggcag ttacggtcaa cgaccacgac atcgttatcg gtcatgcaag cctgcatgat
    12781 ggtgcggtta gagccggaag taccgacgac taccgaccag gagcgatcgg caccaaatac
    12841 gcgtgcggca tatttttcgc tttcgccaaa tgcgccagta tggtcaagca aagaaccgag
    12901 ggaagttcgt tcgatgccca tatcggtgcg gaacagattt tctccatagt agtcatggta
    12961 gaaacgtccg gcgggtgttt tggtaaaacc aacgccgccc tggtggcctg gcgctgccca
    13021 ggaatattca tggatgtcgc tatacttcat cagcgcgctg aacagtggcg gcaacagctg
    13081 ctggcggtag cgggtcatcg cggcaacggc gcgtccggcg ataaagtcgg tggtatcttc
    13141 cagaatccag gcgaattcat cgacaagctc cagcaggtcg cgatccattg cggcgagggc
    13201 tttttcccga tcgcccaaca ggaagaccgg cacgttttgt tggcgctcat gaagcttacc
    13261 gatcaattgt ctgacgtttt gatgttcgtc cggatgttcc atttgatagc tgaacatcag
    13321 gcagtcaatg gcttcgtttg aagagagaat ggcaaaacca tcatcaaagg aggtggattt
    13381 aatcacggta acattttgct ggcttaaagc atctgccaga cgctcaacgg cgttaccgac
    13441 ccaggtgtct tgatggagaa actcgctttc aacaattaat actttcatca ttgcttaccc
    13501 ggttatgaag gaatcttcgt tgcgggcaag tatcttccgg ccttttcggg ctgtaaagcg
    13561 cgtgaaaaac aaacattttt gaaatattta tttttataaa caatgcgtta tgtgattatt
    13621 ttaaattatt ttcactgctt gttatcgacg gctaaactat ttttttggct gatactgata
    13681 tcgtctttag ccgggaaacg tctggcggcg ctgttggcta agtttgcggt attgttgcgg
    13741 cgacatgccg acatatttgc cgaacgtgct gtaaaaacga ctacttgaac gaaagcctgc
    13801 cgtcagggca atatcgagaa tacttttatc ggtatcgctc agtaacgcgc gaacgtggtt
    13861 gatgcgcatc gcggtaatgt actgtttcat cgtcaattgc atgacccgct ggaatatccc
    13921 cattgcatag ttggcgttaa gtttgacgtg ctcagccaca tcgttgatgg tcagcgcctg
    13981 atcatagttt tcggcaataa agcccagcat ctggctaaca taaaattgcg catggcgcga
    14041 gacgctgttt ttgtgtgtgc gcgaggtttt attgaccaga atcggttccc agccagagag
    14101 gctaaatcgc ttgagcatca ggccaatttc atcaatggcg agctggcgaa tttgctcgtt
    14161 cggactgttt aattcctgct gccagcggcg cacttcaaac gggctaagtt gctgtgtggc
    14221 cagtgatttg atcatcatgc cgtgagtgac gtggttaatc aggtctttat ccagcggcca
    14281 ggagagaaac agatgcatcg gcagattaaa aatcgccatg ctctgacagg ttccggtatc
    14341 tgttagttgg tgcggtgtac aggcccagaa cagcgtgata tgaccctgat tgatattcac
    14401 tttttcattg ttaatcaggt attccacatc gccatcgaaa ggcacattca cttcgacctg
    14461 accatgccag tggctggtgg gcatgatatg cggtgcgcga aactcaatct ccatccgctg
    14521 gtattccgaa tacagcgaca gcgggctgcg ggtctgtttt tcgtcgctgc tgcacataaa
    14581 cgtatctgta ttcatggatg gctctctttc ctggaatatc agaattatgg caggagtgag
    14641 ggaggatgac tgcgagtggg agcacggttt tcaccctctt cccagagagg cgaggggagc
    14701 gtccgagcat catgaggccg aaaactctgc ttttcaggta acttattacc ataaactcag
    14761 atttactgct gcttcacgca ggatctgagt ttatgggaat gctcaacctg gaagccggag
    14821 gttttctgca gattcgcctg ccatgatgaa gttattcaag caagccagga gatctgcatg
    14881 atgactgcac ccaaaattac atttatcggc gctggttcga cgattttcgt taaaaatatt
    14941 cttggtgatg tgttccatcg agaggcgctg aaaacggcgc atattgccct gatggacatt
    15001 gatcccaccc gcctggaaga gtcgcatatt gtggtgcgta agctgatgga ttcagcaggg
    15061 gccagcggca aaatcacctg ccacacccaa cagaaagaag ccttacagga tgccgatttt
    15121 gtcgtggtgg catttcagat tggcggttat gaaccttgca cggtgactga tttcgaggtc
    15181 tgtaagcggc atggtctgga acaaaccatt gccgatacgt tggggccggg cggtattatg
    15241 cgcgcgctac gtaccattcc gcatctgtgg caaatttgcg aggacatgac ggaagtctgc
    15301 cccgatgcca cattgctcaa ctacgttaac ccaatggcga tgaatacctg ggcgatgtat
    15361 gcccgctatc cgcatatcaa acaggtaggg ctgtgccatt cggtgcaggg aacggcggaa
    15421 gagctggcgc gtgacctcaa tatcgatccg tccacgctgc gttaccgttg cgctggtatc
    15481 aaccatatgg cgttttacct ggaactggag cgtaaaaccg ccgacggcag ttacgtgaat
    15541 ctctacccgg aactgctggc ggcttatgaa gcagggcagg caccgaagcc acatattcat
    15601 ggtaatactc gctgccagaa tattgtgcgc tacgaaatgt tcaaaaagct gggctacttc
    15661 gtcacggaat cgtcagaaca ttttgccgaa tatacgccgt ggtttattaa gccaggtcgt
    15721 gaggatttga ttgagcgtta taaagtaccg ctggatgagt acccgaaacg ctgcgtcgag
    15781 cagctggcga actggcataa agagctggag gagtataaaa acgcctcccg gattgatatt
    15841 aaaccgtcac gggaatatgc cagcacaatc atgaacgcta tctggactgg cgagtcgagt
    15901 gtgatttacg gcaacgtccg taacgatggt ttgattgata acctgccaca aggatgttgc
    15961 gtggaagtag cctgtctggt tgatgctaat ggcattcagc cgaccaaagt cggtacgcta
    16021 ccttcgcatc tggccgccct gatgcaaacc aacatcaacg tacagacgct gctgaccgaa
    16081 gctattctta cggaaaatcg cgaccgtgtt taccacgccg cgatgatgga cccgcatact
    16141 gccgccgtgc tgggcattga cgaaatatat gctcttgttg acgacctgat tgccgcccac
    16201 ggcgactggc tgccaggctg gttgcaccgt taaaacgcga ctaaacgcta ctgcgccggg
    16261 ggatttattc cggcgcacac ctctgacgat accaataaca gaaggcgggc gttggtaaca
    16321 gcgacccgat accctatgag catttcaatg actacaaaac tcagttatgg atttggagcg
    16381 ttcgggaagg attttgcgat cggcattgtg tatatgtacc tcatgtatta ctacaccgat
    16441 gtcgttgggc tgtctgtggg tttggtcggt actttgtttc tggtggcgag gatctgggat
    16501 gctattaacg atccgattat g
//
LOCUS       DADMIB010000092        16473 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.092, whole genome shotgun sequence.
ACCESSION   DADMIB010000092 DADMIB010000000
VERSION     DADMIB010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16473
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.092"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(118..1401)
                     /gene="gltA"
                     /locus_tag="JNZ89_002708"
     CDS             complement(118..1401)
                     /gene="gltA"
                     /locus_tag="JNZ89_002708"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HAY8936528.1"
                     /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD
                     PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD
                     EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
                     AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER
                     AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
                     EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
                     DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
                     IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR"
     gene            complement(1607..1714)
                     /locus_tag="JNZ89_002709"
     CDS             complement(1607..1714)
                     /locus_tag="JNZ89_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936529.1"
                     /translation="MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV"
     gene            2095..2499
                     /gene="sdhC"
                     /locus_tag="JNZ89_002710"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
     CDS             2095..2499
                     /gene="sdhC"
                     /locus_tag="JNZ89_002710"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HAY8936530.1"
                     /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFV
                     AVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG
                     YLEETFEAGKRSAKISFVITVVLSLLAGVLVW"
     gene            2493..2840
                     /gene="sdhD"
                     /locus_tag="JNZ89_002711"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
     CDS             2493..2840
                     /gene="sdhD"
                     /locus_tag="JNZ89_002711"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase membrane anchor subunit"
                     /protein_id="HAY8936531.1"
                     /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
                     YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV
                     VYVIYGFVVVWGV"
     gene            2840..4606
                     /gene="sdhA"
                     /locus_tag="JNZ89_002712"
     CDS             2840..4606
                     /gene="sdhA"
                     /locus_tag="JNZ89_002712"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HAY8936532.1"
                     /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
                     HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
                     GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
                     FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
                     TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
                     APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
                     RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV
                     SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN
                     RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
                     QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM
                     TRRSVNMEPKLRPAFPPKIRTY"
     gene            4622..5338
                     /locus_tag="JNZ89_002713"
     CDS             4622..5338
                     /locus_tag="JNZ89_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HAY8936533.1"
                     /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKE
                     KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD
                     LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
                     SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK
                     GLNPTRAIGHIKSMLLQRNA"
     gene            5639..8440
                     /gene="sucA"
                     /locus_tag="JNZ89_002714"
     CDS             5639..8440
                     /gene="sucA"
                     /locus_tag="JNZ89_002714"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HAY8936534.1"
                     /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST
                     FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR
                     GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL
                     KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG
                     AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ
                     DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV
                     RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
                     GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
                     DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL
                     YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE
                     AVEMQSRVAKIYGDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
                     HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW
                     EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
                     CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT
                     FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM
                     QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY
                     MSVHQKQQQDLVNDALNVE"
     gene            8455..9672
                     /gene="odhB"
                     /locus_tag="JNZ89_002715"
     CDS             8455..9672
                     /gene="odhB"
                     /locus_tag="JNZ89_002715"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HAY8936535.1"
                     /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
                     VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
                     QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKSPAKESAP
                     AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK
                     QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP
                     RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS
                     TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIK
                     ELLEDPTRLLLDV"
     gene            9948..11114
                     /gene="sucC"
                     /locus_tag="JNZ89_002716"
     CDS             9948..11114
                     /gene="sucC"
                     /locus_tag="JNZ89_002716"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HAY8936536.1"
                     /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
                     VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
                     DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQG
                     RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
                     DGNALFRQLDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIIG
                     AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK"
     gene            11114..11983
                     /gene="sucD"
                     /locus_tag="JNZ89_002717"
     CDS             11114..11983
                     /gene="sucD"
                     /locus_tag="JNZ89_002717"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HAY8936537.1"
                     /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG
                     GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
                     LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE
                     AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA
                     AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
                     LADIGEALKTVLK"
     gene            complement(12087..12809)
                     /gene="mngR"
                     /locus_tag="JNZ89_002718"
     CDS             complement(12087..12809)
                     /gene="mngR"
                     /locus_tag="JNZ89_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-D-glycerate transport/metabolism system
                     transcriptional repressor MngR"
                     /protein_id="HAY8936538.1"
                     /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV
                     TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF
                     EVIPADDFLQQQLQITAQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS
                     KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEY
                     SRNAFNTDDYKFTLIAQRKSSR"
     gene            12918..14894
                     /gene="mngA"
                     /locus_tag="JNZ89_002719"
     CDS             12918..14894
                     /gene="mngA"
                     /locus_tag="JNZ89_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS 2-O-a-mannosyl-D-glycerate transporter
                     subunit IIABC"
                     /protein_id="HAY8936539.1"
                     /translation="MVLFYRAHWRDYKNDQVRIMMNLTTLTHRDALRLNARFTSREEA
                     IHALTQRLAALGKISSTEQFLEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVAT
                     LSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTMHMQLLTALTTRLADDEIRARIQSATT
                     PDELLSALDDKGGTQPSASFSNAPTIVCVPACPAGIAHTYMAAEYLEKAGRKLGVNVY
                     VEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEAL
                     IQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLL
                     SQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGL
                     AANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLML
                     FVVGEPVAWINNSLTAWLNGLSGSNALLLGAIFGFMCSFDLGGPVNKAAYAFCLGAMV
                     NGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLAGITEGAIPM
                     AIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWF
                     GAALVGAAISTAILLIWRRHAVKHGNYLTDGVMP"
     gene            14912..>16473
                     /locus_tag="JNZ89_002720"
     CDS             14912..>16473
                     /locus_tag="JNZ89_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY8936540.1"
                     /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD
                     NEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIV
                     RNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDK
                     TEFLWQSSDGSEVTAQVLPLGYAIGKYLPTDENGLRKRLDSYFDVLEKASVTKEILLP
                     NGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRESLATLKGEFIDGK
                     YMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILK
                     NHAHDSIGCCCSDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNL
                     MPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPF
                     MEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGSLQLV
                     DKDSGVRYDRVL"
BASE COUNT         3953 a         4132 c         4488 g         3900 t
ORIGIN      
        1 aatatatgaa tgtccgatag tggattttat ttttacaatt ttttgtgttt aggcatataa
       61 aaattaaccc gccatttgaa cggcgggtta aaatatttac aacttagcaa tcaaccatta
      121 acgcttgata tcgcttttaa agtcgcgttt ttcatatcct gtatacagct gacgcggacg
      181 ggcaatcttc ataccgtcac tgtgcatttc gctccagtgg gcgatccagc caacggtacg
      241 tgccattgcg aaaatgacgg tgaacatgga agacggaata cccatcgctt tcaggatgat
      301 accagagtag aaatcgacgt tcgggtacag tttcttctcg ataaagtacg ggtcgttcag
      361 cgcgatgttt tccagctcca tagccacttc cagcaggtca tctttggtgc ccagctcttt
      421 cagaacttca tggcaggttt cacgcattac ggtggcgcgc gggtcgtaat ttttgtacac
      481 gcggtgaccg aagcccatca ggcggaaaga atcattttta tctttcgcac gacgaacaaa
      541 ttccggaatg tgtttaacgg agctaatttc ttccagcatt ttcagcgccg cttcgttagc
      601 accaccgtgc gcaggtcccc acagtgaagc aatacctgct gcgatacagg caaacgggtt
      661 cgcacccgaa gagccagcgg tacgcacggt ggaggtagag gcgttctgtt catggtcagc
      721 gtgcaggatc agaatacggt ccatagcacg ttccagaatc ggattaactt catacggttc
      781 gcacggcgtg gagaacatca tattcaggaa gttaccggca taggagagat cgttgcgcgg
      841 ataaacaaat ggctgaccaa tggaatactt gtaacacatc gcggccatgg tcggcatttt
      901 cgacagcagg cggaacgcgg caatttcacg atgacgagga ttgttaacat ccagcgagtc
      961 gtgatagaac gccgccagcg cgccggtaat accacacatg actgccattg gatgtgagtc
     1021 gcgacggaaa gcgtggaaca gacgggtaat ctgctcgtgg atcatggtat gacgggtcac
     1081 cgtagtttta aattcgtcat actgttcctg agtcggtttt tcaccattca gcaggatgta
     1141 acaaacttcc aggtagttag aatcggtcgc cagctgatcg atcgggaaac cgcggtgcag
     1201 caaaatacct tcatcaccat caataaaagt aattttagat tcgcaggatg cggttgaagt
     1261 gaagcctggg tcaaaggtga acacaccttt tgaaccgaga gtacggatat caataacatc
     1321 ttgacccagc gtgcctttca gcacatccag ttcaacagct gtgtccccgt tgagggtgag
     1381 ttttgctttt gtatcagcca tttaaggtct ccttagcgcc ttattgcgta agactgccgg
     1441 aacttaaatt tgccttcgca catcaacctg gctttacccg tttgttattt ggctcgccgc
     1501 tctgtgaaag aggggaaaac ctgggtacag agctctgggc gcttgcaggt aaaggatcca
     1561 ttgatgacga ataaatggcg aatcaagtac ttagcaatcc gaattattaa acttgtctac
     1621 cactaataac tgtcccgaat gaattggtca atacttccac actgttacat aagttaatct
     1681 taggtgaaat accgacttca taacttttac gcattatatg cttttcctgg taatgtttgt
     1741 aacaactttg ttgagtgatt gtcaaattag atgattaaaa attaaataaa tgttgttgtc
     1801 gtgacctgga tcactgttca ggataaaacc cgacaaacta tatgtaggtt aattgtaatg
     1861 attttgtgaa cagcctatac tgccgctagg tctccggaac accctgcaat cccgagccac
     1921 ccagcgttgt aacgtgtcgt tttcgcatct ggaagcagtg ttttgcatga cgcgcagtta
     1981 tagaaaggac gctgtctgac ccgcaagcag accggaggaa ggaaatcccg acgtctccag
     2041 gtaacagaaa gttaacctct gtgcccgtag tccccaggga ataataagaa cagcatgtgg
     2101 gcgttattca tgataagaaa tgtgaaaaaa caaagacctg ttaatctgga cctacagacc
     2161 atccggttcc ccatcacggc gatagcgtcc attctccatc gcgtttccgg tgtgatcacc
     2221 tttgttgcag tgggcatcct gctgtggctt ctgggtacca gcctctcttc ccctgaaggt
     2281 ttcgagcaag cttccgcgat tatgggcagc ttcttcgtca aatttatcat gtggggcatc
     2341 cttaccgctc tggcgtatca cgtcgtcgta ggtattcgcc acatgatgat ggattttggc
     2401 tatctggaag aaacattcga agcgggtaaa cgctccgcca aaatctcctt tgttattact
     2461 gtcgtgcttt cacttctcgc aggagtcctc gtatggtaag caacgcctcc gcattaggac
     2521 gcaatggcgt acatgatttc atcctcgttc gcgctaccgc tatcgtcctg acgctctaca
     2581 tcatttatat ggtcggtttt ttcgccacca gtggcgaact gacatatgaa gtctggatcg
     2641 gtttcttcgc ctctgcgttc accaaagtgt tcaccctgct ggcgctgttt tctatcttga
     2701 ttcatgcctg gatcggcatg tggcaggtgt tgaccgacta cgttaaaccg ctggcattgc
     2761 gcctgatgct gcaactggtg attgtcgttg cactggtggt ttacgtgatt tatggattcg
     2821 ttgtggtgtg gggtgtgtga tgaaattgcc agtcagagaa tttgatgcag ttgtgattgg
     2881 tgccggtggc gcaggtatgc gcgcggcgct gcaaatttcc cagagcggcc agacctgtgc
     2941 gctgctctct aaagtcttcc cgacccgttc ccataccgtt tctgcgcaag gcggcattac
     3001 cgttgcgctg ggtaataccc atgaagataa ctgggaatgg catatgtacg acaccgtaaa
     3061 agggtcggac tatatcggtg accaggacgc gattgaatat atgtgtaaaa ccgggccgga
     3121 agcgattctg gaactcgaac acatgggcct gccgttctcg cgtcttgatg atggtcgtat
     3181 ctatcaacgt ccgtttggcg gtcagtcgaa aaacttcggc ggcgagcagg cggcacgcac
     3241 tgcggcggcg gctgaccgta ccggtcacgc actgttgcac acgctttatc agcagaacct
     3301 gaaaaaccac accaccattt tctccgagtg gtatgcgctg gatctggtga agaaccagga
     3361 tggcgcggtg gtgggttgta ctgcactgtg catcgaaact ggtgaagtgg tttatttcaa
     3421 agcccgcgct accgtgctgg cgactggcgg ggcagggcgt atttatcagt ccaccactaa
     3481 cgcccacatt aacactggcg acggcgtcgg catggctatc cgcgcaggcg taccggtgca
     3541 ggatatggaa atgtggcagt tccacccgac cggtattgcc ggtgcgggcg tactggtcac
     3601 cgaaggttgc cgtggtgaag gcggttatct gctgaacaaa catggcgaac gctttatgga
     3661 gcgttatgcg ccgaacgcca aagacctggc gggccgtgat gtggtggcgc gttccatcat
     3721 gatcgaaatc cgtgaaggtc gcggctgtga tggtccgtgg gggccacacg cgaaactgaa
     3781 actcgaccac ctgggtaaag aagttctcga atcccgtctg ccgggcatcc tggaactctc
     3841 ccgtaccttc gctcacgtcg atccggtgaa agagccgatc ccggttatcc caacctgtca
     3901 ttacatgatg ggcggtattc cgaccaaagt gaccggtcag gcgctgactg tgaatgagaa
     3961 aggcgaagat gtggttgttc cgggactgtt tgccgttggt gaaatcgctt gtgtatcggt
     4021 acacggcgct aaccgtctgg gcggcaactc gctgctggac ctggtggtct ttggtcgtgc
     4081 ggcaggtctg catctgcaag agtctatcgc cgagcagggc gcattgcgcg atgccagcga
     4141 gtctgatgtt gaagcatctc tggatcgtct gaaccgctgg aacaataatc gtaacggtga
     4201 agatccggtg gcgattcgta aagcgctgca agaatgtatg cagcataact tctcggtctt
     4261 ccgtgaaggt gatgcgatgg cgaaagggct tgagcagttg aaagttatcc gcgagcgtct
     4321 gaaaaatgcc cgtctggatg acacttccag cgagttcaac acccagcgcg ttgagtgcct
     4381 ggaactggat aacctgatgg aaacggcgta tgcaacggct gtttctgcca acttccgtac
     4441 cgaaagccgt ggcgcgcata gccgcttcga cttcccggat cgtgatgatg aaaactggct
     4501 gtgccactcc ctgtatctgc cagagtcgga atccatgacg cgccgaagcg tcaacatgga
     4561 accgaaactg cgcccggcat tcccgccgaa gattcgtact tactaatgcg gagacaggaa
     4621 aatgagactc gagttttcaa tttatcgcta taacccggat gttgatgatg ctccgcgtat
     4681 gcaggattac accctggaag cggaagaagg tcgcgacatg atgctgctgg atgcgcttat
     4741 ccagctgaaa gagaaagatc ccagcctgtc gttccgccgc tcctgtcgtg aaggtgtgtg
     4801 cggttccgac ggtctgaaca tgaacggcaa gaatggtctg gcctgtatta ccccgatttc
     4861 ggcactcaac cagccgggca agaagattgt gattcgcccg ctgccaggtt taccggtgat
     4921 ccgcgatttg gtggtagaca tgggacaatt ctatgcgcaa tatgagaaaa ttaagcctta
     4981 cctgttgaat aatggacaaa atccgccagc tcgcgagcat ttacagatgc cagagcagcg
     5041 cgaaaaactc gacgggctgt atgaatgtat tctctgcgca tgttgttcaa cctcttgtcc
     5101 gtctttctgg tggaatcccg ataagtttat cggcccggca ggcttgttag cggcatatcg
     5161 tttcctgatc gatagccgtg ataccgagac tgacagccgc ctcgacggtt tgagcgatgc
     5221 attcagcgta ttccgctgtc acagcatcat gaactgcgtc agtgtatgtc cgaaggggct
     5281 gaacccgacg cgcgccatcg gccatatcaa gtcgatgttg ttgcaacgta atgcgtaaac
     5341 cgtaggcctg ataagacgcg caagcgtcgc atcaggcaac cagtgccgga tgcggcgtga
     5401 acgccttatc cggcctacaa gtcattaccc gtaggcctga taagcgcagc gcatcaggcg
     5461 taacaaagaa atgcaggaaa tctttaaaaa ctgcccctga cactaagaca gtttttaaag
     5521 gttccttcgc gagccactac gtagacaaga gctcgcaagt gaaccccggc acgcacatca
     5581 ctgtgcgtgg tagtatccac ggcgaagtaa gcataaaaaa gatgcttaag ggatcacgat
     5641 gcagaacagc gctttgaaag cctggttgga ctcttcttac ctctctggcg caaaccagag
     5701 ctggatagaa cagctctatg aagacttctt aaccgatcct gactcggttg acgctaactg
     5761 gcgttcgacg ttccagcagt tacctggtac gggagtcaaa ccggatcaat tccactctca
     5821 aacgcgtgaa tatttccgcc gcctggcgaa agacgcttca cgttactctt caacgatctc
     5881 cgaccctgac accaatgtga agcaggttaa agtcctgcag ctcattaacg cataccgctt
     5941 ccgtggtcac cagcatgcga atctcgatcc gctgggactg tggcagcaag ataaagtggc
     6001 cgatctggat ccgtctttcc acgatctgac cgaagcagac ttccaggaaa ccttcaacgt
     6061 cggttcattt gccagcggca aagaaaccat gaaactcggc gagctgctgg aagccctcaa
     6121 gcaaacctac tgcggcccga ttggtgccga gtatatgcac atcaccagca ccgaagaaaa
     6181 acgctggatc caacagcgta tcgagtctgg tcgcgcgact ttcaatagcg aagagaaaaa
     6241 acgcttctta agcgaactga ccgccgctga aggccttgaa cgttacctcg gcgcaaaatt
     6301 ccctggcgca aaacgcttct cgctggaagg cggtgacgcg ttaatcccga tgcttaaaga
     6361 gatgatccgc cacgctggca acagcggcac ccgcgaagtg gttctcggga tggcgcaccg
     6421 tggtcgtctg aacgtgctgg tgaacgtgct gggtaaaaaa ccgcaagact tgttcgacga
     6481 gttcgccggt aaacataaag aacacctcgg cacgggtgac gtgaaatacc acatgggctt
     6541 ctcgtctgac ttccagaccg atggcggcct ggtgcacctg gcgctggcgt ttaacccgtc
     6601 tcaccttgag attgtaagcc cggtagttat cggttctgtt cgtgcccgtc tggacagact
     6661 tgatgagccg agcagcaaca aagtgctgcc aatcaccatc cacggtgacg ccgcagtgac
     6721 cgggcagggc gtggttcagg aaaccctgaa catgtcgaaa gcgcgtggtt atgaagttgg
     6781 cggtacggta cgtatcgtta tcaacaacca ggttggtttc accacctcta atccgctgga
     6841 tgcccgttct acgccgtact gtactgatat cggtaagatg gttcaggccc cgattttcca
     6901 cgttaacgcg gacgatccgg aagccgttgc ctttgtgacc cgtctggcgc tcgatttccg
     6961 taacaccttt aaacgtgatg tcttcatcga cctggtgtgc taccgccgtc acggccacaa
     7021 cgaagccgac gagccgagcg caacccagcc gctgatgtat cagaaaatca aaaaacatcc
     7081 gacaccgcgc aaaatctacg ctgacaagct ggagcaggaa aaagtggcga cgctggaaga
     7141 tgccaccgag atggttaacc tgtaccgcga tgcgctggat gctggcgatt gcgtagtggc
     7201 agagtggcgt ccgatgaaca tgcactcttt cacctggtcg ccgtacctca accacgaatg
     7261 ggacgaagag tacccgaaca aagttgagat gaagcgcctg caggagctgg cgaaacgcat
     7321 cagcacggtg ccggaagcag ttgaaatgca gtctcgcgtt gccaagattt atggcgatcg
     7381 ccaggcgatg gctgccggtg agaaactgtt cgactggggc ggtgcggaaa acctcgctta
     7441 cgccacgctg gttgacgaag gcattccggt tcgcctgtcg ggtgaagact ccggtcgcgg
     7501 taccttcttc caccgccacg cggtgatcca caaccagtct aacggttcca cttacacgcc
     7561 gctgcaacac atccataacg ggcagggcgc gttccgcgtc tgggactccg tactgtctga
     7621 agaagcagtg ctggcgtttg aatacggtta tgccaccgca gaaccacgca ctctgaccat
     7681 ctgggaagcg cagttcggtg acttcgctaa cggtgctcag gtggttatcg accagttcat
     7741 ctcctctggc gaacagaaat ggggccggat gtgtggtctg gtgatgttgc tgccgcacgg
     7801 ttatgaaggg caggggccgg agcactcctc cgcgcgtctg gaacgttatc tgcaactttg
     7861 tgctgagcaa aacatgcagg tgtgcgtacc gtctaccccg gcacaggttt accacatgct
     7921 gcgtcgtcag gcgctgcgcg ggatgcgtcg tccgctggtc gtgatgtcgc cgaaatccct
     7981 gctgcgtcat ccgctggcgg tttccagcct cgaagaactg gcgaacggca ccttcctgcc
     8041 agccatcggt gaaatcgacg agcttgatcc gaagggcgtg aagcgcgtag tgatgtgttc
     8101 tggtaaggtt tattacgacc tgctggaaca gcgtcgtaag aacaatcaac acgatgtcgc
     8161 cattgtgcgt atcgagcaac tctacccgtt cccgcataaa gcgatgcagg aagtgttgca
     8221 gcagtttgct cacgtcaagg attttgtctg gtgccaggaa gagccgctca accagggcgc
     8281 atggtactgc agccagcatc atttccgtga agtgattccg tttggggctt ctctgcgtta
     8341 tgcaggccgc ccggcctccg cctctccggc ggtagggtat atgtccgttc accagaaaca
     8401 gcaacaagat ctggttaatg acgcgctgaa cgtcgaataa ataaaggata cacaatgagt
     8461 agcgtagata ttctggtccc tgacctgcct gaatccgtag ccgatgccac cgtcgcaacc
     8521 tggcataaaa aacccggcga cgcagtcgta cgtgatgaag tgctggtaga aatcgaaact
     8581 gacaaagtgg tactggaagt accggcatca gcagacggca ttctggatgc ggttctggaa
     8641 gatgaaggta caaccgtaac gtctcgtcag atccttggtc gcctgcgtga aggcaacagc
     8701 gccggtaaag aaaccagcgc caaatctgaa gagaaagcgt ccactccggc gcaacgccag
     8761 caggcgtctc tggaagagca aaacaacgat gcgttaagcc cggcgatccg tcgcttgctg
     8821 gctgaacata acctcgacgc cagcgctatt aaaggcaccg gcgtgggtgg tcgtctgacc
     8881 cgtgaagatg tggaaaaaca tctggcgaaa tccccggcga aagagtctgc accggcagcg
     8941 gctgctccgg cggcgcaacc ggctctggct gcacgtagtg aaaaacgtgt cccgatgact
     9001 cgcctgcgta agcgtgtggc agagcgtctg ctggaagcga aaaactccac cgccatgctg
     9061 accacgttca acgaagtcaa catgaagccg attatggatc tgcgtaagca gtacggtgaa
     9121 gcgtttgaaa aacgccacgg catccgtctg ggctttatgt ccttctacgt gaaagcggtg
     9181 gttgaagccc tgaaacgtta cccggaagtg aatgcttcta tcgacggcga tgacgtggtt
     9241 taccacaact atttcgacgt cagcatggcg gtttctacgc cgcgcggcct agtgacgccg
     9301 gttctgcgtg atgtcgatac cctcggcatg gcagacatcg agaagaaaat caaagagctg
     9361 gcagtcaaag gccgtgatgg caagctgacc gttgaagatc tgaccggtgg taacttcacc
     9421 atcaccaacg gtggtgtgtt cggttccctg atgtctacgc cgatcatcaa cccgccgcag
     9481 agcgcaattc tgggtatgca cgctatcaaa gatcgtccga tggcggtgaa tggtcaggtt
     9541 gagatcctgc cgatgatgta cctggcgctg tcctacgatc accgtctgat cgatggtcgc
     9601 gaatccgtgg gcttcctggt aacgatcaaa gagttgctgg aagatccgac gcgtctgctg
     9661 ctggacgtgt agtagtttaa gtttcacctg cactgtagac aggataaggc attatcgcct
     9721 tctccggcaa ttgaagcctg atgcgacgct taacgcgtct tatcaggcct acgggaagca
     9781 ccaatgtagg tcggataagg cgcttgcgcc gcatccgaca agcgatgcct gatgcgacac
     9841 ttacgcgtct tatcaggcct acaggtgacc gacaatgccc ggaggcgata cgaaatattc
     9901 ggtctacggt ttaaaagata acgattgctg aaggatggac agaacacatg aacttacatg
     9961 aatatcaggc aaaacaactt tttgcccgct atggcttacc agcaccggtg ggttatgcct
    10021 gtactactcc gcgcgaagca gaagaagccg cttcaaaaat cggtgccggt ccgtgggtag
    10081 tgaaatgtca ggttcacgct ggtggccgcg gtaaagcggg cggtgtgaaa gttgtaaaca
    10141 gcaaagaaga catccgtgct tttgcagaaa attggctcgg caagcgtctg gtaacgtatc
    10201 aaacagatgc caatggccaa ccggttaacc agattctggt tgaagcagcg accgatatcg
    10261 ctaaagagct gtatctcggt gccgttgtag accgtagttc ccgtcgtgtg gtctttatgg
    10321 cctccactga aggcggcgtg gaaatcgaaa aagtggcgga agaaactccg cagctgatcc
    10381 ataaagttgc gcttgatccg ctgacaggcc cgatgccgta tcagggacgc gagctggcgt
    10441 tcaaactggg tctggaaggt aaactggttc agcagttcac caaaatcttc atgggtctgg
    10501 cgaccatttt cctggagcgc gacctggcgt tgatcgaaat caacccgctg gtcatcacca
    10561 aacagggtga tctgatttgc ctcgacggca aactgggcgc tgatggcaac gcactgttcc
    10621 gccagcttga tctgcgcgaa atgcgtgacc agtcgcagga agatccgcgt gaagcacagg
    10681 ctgcacagtg ggaactgaac tacgttgcgc tggacggtaa catcggttgt atggttaacg
    10741 gcgcaggtct ggcgatgggt acgatggaca tcgttaaact gcacggcggc gaaccggcta
    10801 acttccttga cgttggcggc ggtgcaacca aagaacgtgt aaccgaagcg ttcaaaatca
    10861 tcctctctga cgacaaagtg aaagtcgttc tggttaacat cttcggcggt atcgttcgtt
    10921 gcgacctgat cgctgacggt atcatcggcg cggtagcaga agtgggtgtt aacgtaccgg
    10981 tcgtggtacg tctggaaggt aacaacgccg aactcggcgc gaagaaactg gctgacagcg
    11041 gcctgaatat tattgcagca aaaggtctga cggatgcagc tcagcaggtt gttgccgcag
    11101 tggaggggaa ataatgtcca ttttaattga taaaaacacc aaggttatct gccagggctt
    11161 tactggtagc caggggactt tccactcaga acaggccatt gcatacggca ctaaaatggt
    11221 tggcggcgta accccaggta aaggcggtac tacccacctc ggcctgccgg tgttcaacac
    11281 cgtgcgtgaa gctgttgctg ctactggcgc taccgcttct gttatctacg taccagcacc
    11341 gttctgcaaa gactccattc tggaagctat tgatgcaggc atcaaactga ttatcaccat
    11401 cactgaaggc atcccgacgc tggatatgct gactgtgaaa gtgaaactgg acgaagccgg
    11461 cgttcgtatg atcggcccga actgcccggg cgttatcact ccgggtgaat gcaaaatcgg
    11521 tatccagccg ggtcacattc acaaaccggg taaagtgggt atcgtttccc gttccggtac
    11581 actgacctat gaagcggtta aacagaccac ggattacggt ttcggtcagt cgacctgtgt
    11641 tggtatcggc ggtgacccga tcccaggctc taactttatc gacatcctcg aaatgttcga
    11701 aaaagatccg cagaccgaag cgatcgtgat gatcggtgag atcggcggta gcgctgaaga
    11761 agaagcggca gcgtacatca aagagcacgt taccaagcca gttgtaggtt acatcgctgg
    11821 tgtgactgcg ccgaaaggca aacgtatggg ccacgcgggt gcgatcattg ccggtgggaa
    11881 agggactgcg gatgagaaat tcgctgctct ggaagccgca ggcgtgaaaa ccgttcgcag
    11941 cctggcggat atcggtgaag cactgaaaac tgttctgaaa taaatatctg taataagaaa
    12001 tagccctcgc cgcttccctc tacaggaatg gcgaagggct gtcggtttcg acatggttgg
    12061 ccatcgtatg atggcctttt ttgtgcttat cgcgatgatt ttcgctgcgc tatcagggta
    12121 aatttatagt catcggtatt aaaagcgttg cggctatatt caaacacccg accatcaact
    12181 aaatatccac gcgatacttt ttcaagaatc ggctttgtct ggctgatatt aagcagacgg
    12241 ctcatctctt cggttggcat cagaggaatg atttcctgtt cgctacgatc gataaccatc
    12301 ttcttcactt cttcaataaa gtgatatttc gaattttcca tgacctgcca ggtgagatcc
    12361 gggaacaacg caagcggcat ccaggtttct tccagcgcca ttggcttttg cttgcgatag
    12421 cgcacgcgct tcacatgcca cacacgatcc tgcgcggtga tttgtagctg ttgctgaaga
    12481 aaatcgtcag ccggaatcac ttcaaatatc aggacttcac tgtgtgtatc gacgtgacgg
    12541 tccgacagtt tttcatcaaa actggttaac tgaaaaatat cgtaattgac ccgctcttct
    12601 ttgacgtaag tcccgctgcc ctgaatgctt tcgaggatct gctgctcgac tagctggcgc
    12661 aaagcctgac gcaccgtaac ccggctgacg ccaaactctg tttgtagcgc tgattcagtg
    12721 ggtaacgcat cgccaggttt aagctcgcca cgcgcaattt gttcacgaat gcgatcggca
    12781 atctgccggt ataagggctt gtgtcccatt tttagtatct cattaatacg aatttagcca
    12841 ttatgcccga taaattcatc ctgtaaataa tgcaaataca atacaaataa tttcaatcaa
    12901 gtgaaattga tcatataatg gtattgtttt atcgggcaca ctggcgcgac tataaaaacg
    12961 atcaagtgag gatcatgatg aatctgacga ctctgaccca ccgcgatgcg ttgcgtctga
    13021 atgcgcgctt taccagccgt gaagaggcca tccacgcgtt gactcaacgt cttgctgctc
    13081 tggggaaaat ttccagtact gagcaatttc tggaagaagt gtatcgccgt gaaagccttg
    13141 gcccgaccgc cttaggtgaa gggttggctg tgccgcatgg caaaactgct gcggtaaaag
    13201 aagcggcgtt tgcggtcgcc acactcagcg agccgcttca gtgggaaggc gttgatggcc
    13261 cggaagcagt tgatttagtg gtgctgctgg cgattccccc caatgaagcg ggtactatgc
    13321 atatgcaact gctgacagcg ctgaccacgc gccttgcgga tgatgagatt cgggcgcgta
    13381 tacagtcggc gacgacgcct gatgagttgc tctcggcgct ggatgacaag ggaggcacgc
    13441 aaccttctgc ctctttttcc aacgcgccaa ctatcgtctg cgtaccggcc tgtccggcgg
    13501 gtattgctca cacctatatg gctgcggaat atctggaaaa agccggacgc aaactcggcg
    13561 taaatgttta cgttgaaaaa caaggcgcta acggcattga agggcgttta acggcggatc
    13621 aactcaatag tgcaaccgcc tgtatttttg cggctgaagt cgccatcaag gagagtgagc
    13681 gttttaatgg cattcccgcg ctttcagtgc ctgttgccga gccgattcgc catgcagaag
    13741 cgttgatcca acaagcgctt accctcaagc gtagcgatga gacgcgtacc gtacagcaag
    13801 atacgcaacc ggtgaaaagt gtcaaaacgg agctgaaaca ggcactgttg agcggaatct
    13861 cttttgccgt accgttgatt gtcgcggggg gcacggtgct ggcggtcgcg gtattactgt
    13921 cgcaaatctt cgggctacaa gatctgttta atgaagaaaa ctcctggctg tggatgtacc
    13981 gcaagctggg cggcgggctg ctcggaattt tgatggtacc ggtgctcgcg gcctatactg
    14041 cctattctct ggcagataaa ccggcgttag cgccaggctt tgcggctgga cttgccgcca
    14101 acatgatcgg ctccgggttt ctcggcgcgg tcgttggcgg attgatagcc ggttacttga
    14161 tgcgctgggt gaaaaatcac ttgcgtctta gcagtaaatt caatggattc ctgacttttt
    14221 atctctaccc ggtgctcggt acgttgggag cgggcagtct gatgctgttt gtggtgggag
    14281 aacctgtcgc atggatcaat aactcgctta ccgcctggct gaacggtctg tcaggaagta
    14341 acgcgctgtt gctgggtgcc attttcggtt ttatgtgttc ctttgatctt ggagggccag
    14401 tgaacaaagc cgcttatgca ttctgcctgg gcgcaatggt gaacggcgtt tacggcccgt
    14461 atgccatttt cgcctccgtc aaaatggttt cggcatttac cgtaaccgct tccacgatgc
    14521 tcgcaccgcg cctgtttaaa gagtttgaaa ttgagaccgg gaaatccacc tggctgttag
    14581 ggctggcagg tattaccgaa ggggcgatcc cgatggcgat tgaagatccg ctgcgggtta
    14641 ttggttcgtt tgtgctgggc tctatggtaa cgggcgctat tgtcggtgcg atgaatatcg
    14701 gcctttcgac acccggtgcc ggcattttct cgctcttttt acttcatgat aatggcgcgg
    14761 gcggtgttat ggcggcaatt ggctggtttg gtgcggcatt ggtgggggct gcaatctcga
    14821 ctgcaattct cctgatctgg cggcgtcacg cggttaagca tggcaactat ctgactgatg
    14881 gcgtaatgcc ataaacaaaa aggaaacgac gatgaaagcg gtatctcgtg ttcacatcac
    14941 cccgcatatg cactgggatc gagagtggta tttcaccacc gaagagtcac gtattctgct
    15001 ggtcaataat atggaagaga tcctgtgccg actggaacag gacaacgaat acaaatatta
    15061 cgtactcgac gggcaaacgg cgatcctcga agattatttc gcggtgaaac cggaaaacaa
    15121 agaccgtgtg aagaaacagg tagaagccgg caagttgatt atcggcccct ggtataccca
    15181 gaccgatacc acgattgttt ctgcggaatc catcgtccgt aatctgatgt acggaatgcg
    15241 tgactgcctc gcgtttggcg agccgatgaa aataggttat ttaccagatt cctttggcat
    15301 gtccgggcaa ctgccgcata tctacaatgg atttggcatt acccgcacca tgttctggcg
    15361 cggatgttcg gagcgccacg gtactgataa aaccgagttt ttgtggcaaa gcagtgacgg
    15421 tagcgaagtg acggcgcagg tgctgccgct gggctacgcc ataggtaagt acttacctac
    15481 cgacgaaaac ggattacgta aacgcctcga cagttatttt gacgtgctgg aaaaagcgtc
    15541 tgtaaccaaa gagattttgc tgccgaatgg tcatgaccag atgccattgc agcaaaatat
    15601 cttcgaagtg atggataagc tacgtgagat ctaccctcaa cgtaagtttg tgatgagccg
    15661 ctttgaagag gtatttgaga agatcgaagc gcagcgtgaa agtctggcca ccctgaaagg
    15721 tgaatttatc gatggcaaat atatgcgcgt acatcgcacc atcggttcca cgcgcatgga
    15781 tatcaaaatt gcccacgcac gtattgaaaa taagattgtt aatctgctgg aaccgctggc
    15841 aacgctggcc tggacgttgg gttttgaata ccaccacggc ttgctggaga aaatgtggaa
    15901 agagatctta aaaaatcatg cccacgacag tatcggttgt tgttgcagtg acaaagttca
    15961 tcgcgaaatt gtcgcccgct tcgaactggc tgaagacatg gcggataatc tgctgcgttt
    16021 ctacatgcgc aaaattgccg ataacatgcc acagagtgat gccgacaaac tcgtgctgtt
    16081 taacctgatg ccctggccgc gggaagaagt tattaacacc actgtgcggc tgcgcgccag
    16141 ccagtttaat ctacgagacg atcgcggtca gcctgtaccg tattttattc gccatgcccg
    16201 tgagatcgat ccaggcctaa tcgatcggca aatagttcat tacggtaatt acgatccctt
    16261 tatggagttt gatatacaga tcaaccagat tgtcccttct atgggctatc gcacgcttta
    16321 tatcgaagcg aatcagcctg gcaacgtgat tgcggcaaaa agtgacgctg aagggatact
    16381 ggaaaatgct ttctggcaaa ttgcgctcaa tgaggatggt tctctgcaac tggtagataa
    16441 agacagcggt gtgcgctatg accgagtatt gca
//
LOCUS       DADMIB010000093        16340 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.093, whole genome shotgun sequence.
ACCESSION   DADMIB010000093 DADMIB010000000
VERSION     DADMIB010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16340
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.093"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(206..1306)
                     /gene="chaA"
                     /locus_tag="JNZ89_002721"
     CDS             complement(206..1306)
                     /gene="chaA"
                     /locus_tag="JNZ89_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-potassium/proton antiporter ChaA"
                     /protein_id="HAY8936541.1"
                     /translation="MSNAQEAVKTRHKEISLIFPVLALVVLFLWGSSQTLPVVIAINL
                     LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
                     MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
                     LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH
                     SSVWHAIWLIIHLIAVIAVTKMNASPLETLLDSMNAPVAFTGFLVALLILSPEGLGAL
                     KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNELQFALGAPEMVVMVASLV
                     LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
     gene            1576..1806
                     /gene="chaB"
                     /locus_tag="JNZ89_002722"
     CDS             1576..1806
                     /gene="chaB"
                     /locus_tag="JNZ89_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative cation transport regulator ChaB"
                     /protein_id="HAY8936542.1"
                     /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKDDRRD
                     DASREETAHKVAWAAVKHEYAKGDDDKWHKKS"
     gene            1964..2659
                     /locus_tag="JNZ89_002723"
     CDS             1964..2659
                     /locus_tag="JNZ89_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HAY8936543.1"
                     /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE
                     GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG
                     RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHP
                     EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA
                     ENYPDGVLRPGFA"
     gene            complement(2703..3056)
                     /gene="ychN"
                     /locus_tag="JNZ89_002724"
     CDS             complement(2703..3056)
                     /gene="ychN"
                     /locus_tag="JNZ89_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/F sulfur relay family protein YchN"
                     /protein_id="HAY8936544.1"
                     /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD
                     AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV
                     ELAQWTLSADKVLTF"
     gene            3240..4634
                     /gene="ychO"
                     /locus_tag="JNZ89_002725"
     CDS             3240..4634
                     /gene="ychO"
                     /locus_tag="JNZ89_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415738.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter invasin YchO"
                     /protein_id="HAY8936545.1"
                     /translation="MSRFVPRIIPFYLLLLVAGGTANAQSTFEQKAANPFDNNNDGLP
                     DLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHV
                     ESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYFTWSQLGLTQQDNGLVSNV
                     GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLLANFYQPFAAWHEQT
                     ATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGL
                     NYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRY
                     DNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQ
                     ILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEYNQGQRVSSNEITLTLVE
                     PFDALSNDELRWEP"
     gene            complement(4635..5285)
                     /gene="narL"
                     /locus_tag="JNZ89_002726"
     CDS             complement(4635..5285)
                     /gene="narL"
                     /locus_tag="JNZ89_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator NarL"
                     /protein_id="HAY8936546.1"
                     /translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG
                     IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG
                     ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRE
                     RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
     gene            complement(5278..7074)
                     /gene="narX"
                     /locus_tag="JNZ89_002727"
     CDS             complement(5278..7074)
                     /gene="narX"
                     /locus_tag="JNZ89_002727"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /protein_id="HAY8936547.1"
                     /translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA
                     HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDEQLAQLQGL
                     QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA
                     VFMALLLVFTIIWLRVRLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN
                     MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ
                     NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL
                     ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA
                     TIARELHDSIAQSLSCMKMQVSCLQMQGDALPASSRELLSQIRNELNASWAQLRELLT
                     TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS
                     NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD
                     CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE"
     gene            7413..8804
                     /gene="narK"
                     /locus_tag="JNZ89_002728"
     CDS             7413..8804
                     /gene="narK"
                     /locus_tag="JNZ89_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter NarK"
                     /protein_id="HAY8936548.1"
                     /translation="MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC
                     LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR
                     RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK
                     QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI
                     WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
                     FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL
                     LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
                     ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
                     VITWAVYGRHSKK"
     gene            9320..13042
                     /locus_tag="JNZ89_002729"
     CDS             9320..13042
                     /locus_tag="JNZ89_002729"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HAY8936549.1"
                     /translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY
                     LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVR
                     SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
                     DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY
                     TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG
                     FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN
                     VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA
                     EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG
                     CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
                     TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD
                     YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ
                     GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM
                     NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHD
                     SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERAYPATYERFTSIGPLMEKIGNGG
                     KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW
                     AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
                     HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNPEKALN
                     FLTPHQKWGIHSTYSDNQLMLTLGRGGPVVWLSEADAKELGIADNDWIEVYNSNGALT
                     ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYAH
                     LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGND"
     gene            13060..14598
                     /gene="narH"
                     /locus_tag="JNZ89_002730"
     CDS             13060..14598
                     /gene="narH"
                     /locus_tag="JNZ89_002730"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HAY8936550.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV
                     ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE
                     PFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN
                     FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR
                     GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD
                     ADAIERAASTENEKDLYQRQLEVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA
                     MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLAN
                     LLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIA
                     NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT
                     EPHP"
     gene            14595..15305
                     /gene="narJ"
                     /locus_tag="JNZ89_002731"
     CDS             14595..15305
                     /gene="narJ"
                     /locus_tag="JNZ89_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HAY8936551.1"
                     /translation="MIELVIVSRLLEYPDAALWQHQQEMFEVIAASKNLSKEDAHALG
                     IFLRDLTAMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG
                     LQLNSRELPDHLPLYLEYLSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDL
                     LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR
                     FAGAVAPQYLNITTGGQH"
     gene            15305..15982
                     /gene="narI"
                     /locus_tag="JNZ89_002732"
     CDS             15305..15982
                     /gene="narI"
                     /locus_tag="JNZ89_002732"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HAY8936552.1"
                     /translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD
                     RKGMNLASNLFHIGILGIFAGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL
                     IGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
                     GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
                     QLVRARH"
     gene            complement(16165..16296)
                     /locus_tag="JNZ89_002733"
     ncRNA           complement(16165..16296)
                     /ncRNA_class="other"
                     /locus_tag="JNZ89_002733"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
BASE COUNT         3924 a         4088 c         4384 g         3944 t
ORIGIN      
        1 ctcaattcat cttcacttca tccctgaaat gtttgcaata aagagtacat tccggctttt
       61 caacagctgt tgcagtggtt tcgtgcaggt tgtggtacag gctcgcaatt ctgattaacg
      121 agctgtccag gtagtatgaa gaaatacaat aagcaggaat ttatcttatc tcccccgatt
      181 tccgtcatcg gaggagatat aactgtcagg caaatatcgt catcaaatag gcggcaaaca
      241 gtgccagatg cgctgcgcca ttgagcacgt tagtacgtcc ggtggagaag gagatatggc
      301 acagcactaa agaggccacc atcaccacca tttctggcgc accaagtgca aactgtaatt
      361 cgttacccgt cataaaggca attagcgtga cgacaggtac ggtaagtgaa atggttgcta
      421 acactgaacc aaagaacaga ttcatcgcgc gctggacctg gttgttcaac actgctttta
      481 acgcacctaa accttccggc gacagaatca acagagccac caggaagcca gtaaaggcga
      541 caggggcatt catgctgtcg agcaatgtct ccagcgggct ggcattcatt ttggtgactg
      601 caataacggc aatcagatgg ataatcaacc agatagcatg ccacacgctg ctatgggcag
      661 acggtttacc gtgatgcggg tcgtcgtcat cactgtcatc ttcgtgctcg tagacaaaca
      721 aactttgatg cgttttggtc tggatcagca aaaatacgcc atacattgcc gcagaaatta
      781 atgctaccag taacgcctga ccggttgaaa aattcgccgc aggcagagcc attggaaata
      841 ccagtacgat tatcgccagg gggaacagcg caattaaata ctgcttgata ccaaacagat
      901 tcatatattg ggtggcaaac ttacgaccgc ccaacaataa tgaaaagcca accagcccac
      961 cggtaacaat cataatgatt gaatagagcg tatcacgcat tagcgttggc gcggcgtcgc
     1021 cggttgccat taaagctgaa atcaaactga cttcaagaat aaccactgaa aggctaagaa
     1081 taagcgaacc gtaaggttct cccaggcgat gggctaatac gtccgcatga cggacaacac
     1141 taaaggcgct acttaaaata ccaataagcg caagaagatt gatggcaatg accactggta
     1201 gtgtctggct gcttccccac aggaacagca ctaccagcgc cagaaccggg aaaataagcg
     1261 aaatctcctt gtggcgggtt tttaccgcct cttgagcatt tgacattatg gttatccctt
     1321 tgcagatgaa tttatcgaaa atgtaaaaaa taggtaggaa aaataacaga aagtgtctgg
     1381 atatcggtaa cattttacga atttttaccc cactgtcgat tttttactca ttgggacata
     1441 aaaataagta ttacgtttag acaatgtttg ttttagcgtt tcttaagaac agtctgacat
     1501 gaaaattctt atgttttggc aagagtagat attgttgacc acacttaatg ttcaactttg
     1561 taaaaggagt caacgatgcc gtataaaacg aaaagcgatc tgccggaaag cgtaaagcac
     1621 gttctaccgt ctcatgccca ggatatctat aaagaagcgt tcaacagcgc atgggatcaa
     1681 tataaagata aagacgatcg gcgtgatgac gccagtcgcg aagaaaccgc gcataaagtg
     1741 gcctgggctg ctgtgaagca tgaatatgcc aaaggggatg atgataaatg gcataaaaaa
     1801 tcgtaaaacc ggtagcttag ttaaagctat tcgtgcggtg ttgccttgca agtggtccgt
     1861 ggattgcata ttgtcccgtt agtggtttca aaatgagcag taaaaatgtc cggaagacac
     1921 caaaaagttg tcgcagggaa gtatgcagtg gcggaggtgt aaggtgataa cgcgtgattt
     1981 cttgatgaat gccgattgta aaacggcatt tggtgccatt gaagaatcac tcttatggtc
     2041 agcagagcaa cgagcggctt cgctggcggc gacgctggct tgtcgacctg atgagggacc
     2101 ggtgtggatc ttcggttatg gatcgttgat gtggaatccg gcactggagt ttaccgagtc
     2161 gtgcaccggt acactggttg gatggcatcg cgcgttttgc ctgcgcctga ccgccgggcg
     2221 cgggactgcg caccagccgg gacggatgct tgcactgaaa gagggcggac gcactacagg
     2281 cgtcgcctat cgactgccag aagagacgct ggagcaggaa ctaaccctgt tgtggaagcg
     2341 cgagatgatt accggctgtt atctgccaac ctggtgtcag cttgatcttg atgatggatg
     2401 cacagtaaac gccattgtgt ttattatgga cccgcgacat ccagaatatg aatctgacac
     2461 tcgcgctcag gtcatcgcgc cgttgattgc ggcggcgagc ggtccgctgg gaaccaacgc
     2521 acaatacctg ttttcactgg aacaggagct tatcaaactg ggaatgcagg acgatgggct
     2581 gaatgatttg ctggtatcgg taaaaaaact gctggcggag aattatccgg atggtgtgtt
     2641 acggccggga ttcgcctgag taaacttccc gcatagtggg gcgtcagacg ccccctcaaa
     2701 cattaaaatg tgagcacttt atcggctgac agcgtccatt gcgccagttc cacaagagta
     2761 ccgatttcca ccccatcaat cagaggaagt gtactaatcc cgcgcccgtc ggtacaggtt
     2821 ttgcacaatt tcaccggtac attctgagcg gtaaggatct ccagcatttg ctgaatgttg
     2881 tagccttccc ctggtttttg cccgcgcaac ccggctgtga ccgcatcaga catgaggaac
     2941 agacgcagat ccagattgct ctcctgctct cgtaacgcaa tggccagccg caagctgtta
     3001 aacaaggatt cgctcccgta aggtgcgcca ttggcaacga tcacgatttt ttgcattatt
     3061 tactcctgta ttcagggaat tagacactca tcttctatct tactgcttct gcagcgtctg
     3121 accaatcggt cacattttta aggattttcc tgaaagcgcg agaaaatacg acaaaagttg
     3181 ccagtaatcg ttattcttta aggctatggt tttcattatt accggaagtt accgacgttt
     3241 tgagccgttt cgttcctcgc attatcccgt tttatttact cttgcttgta gcaggcggta
     3301 cagctaacgc acaatctacc ttcgagcaaa aagcggcaaa tccctttgat aataacaatg
     3361 atggtctgcc ggatttaggc atggctcccg aaaatcatga tggggaaaaa cactttgctg
     3421 aaattgtgaa agatttcggc gaaaccagta tgaatgataa cgggctggat actggcgagc
     3481 aggcaaaagc tttcgcattg ggaaaagtcc gcgacgcgct tagtcaacag gttaatcagc
     3541 acgtagagtc ctggctatca ccgtggggaa atgccagtgt tgacgtcaaa gtggataacg
     3601 aaggacattt caccggcagt cgtggaagct ggtttgtgcc gttacaagat aatgatcgtt
     3661 atttcacctg gagccagctt ggtcttactc agcaggataa tgggttggtg agcaatgtgg
     3721 gcgttgggca acgctgggcg cgcggcaact ggctggtggg ttataacact ttttatgaca
     3781 acttgctgga cgaaaatctt cagcgagcgg gctttggtgc cgaagcgtgg ggcgaatatt
     3841 tgcgattatt ggcaaacttt tatcagccgt ttgctgcatg gcatgaacag acagccacgc
     3901 aggaacaacg gatggcgcgc gggtacgacc tgacagctcg gatgcgcatg ccgttctatc
     3961 aacacctcaa taccagtgtc agcctagaac agtattttgg tgatcgtgtt gatttgttta
     4021 actctggtac gggttatcac aatcccgtcg cgttgagtct gggattaaat tacacccctg
     4081 tgccattagt cactgtgacg gcccagcata aacagggtga aagtggcgag aatcaaaata
     4141 acctcgggct gaatcttaat taccgctttg gtgtaccgct caaaaaacaa ctttctgcgg
     4201 gcgaggttgc cgaaagtcag tcgttacgtg gtagtcgcta tgacaatccg cagcgaaata
     4261 atctaccgac tcttgagtac cgacagcgaa aaacgttaac ggtgtttctg gcgacaccgc
     4321 cgtgggatct aaaacctggc gaaacagtgc cgctgaaatt acaaatccgc agtcgttacg
     4381 gtattcggca actgatttgg cagggcgata cgcagatatt aagtttgacg ccgggcgcac
     4441 aagccaacag cgcggagggc tggacgctga tcatgcctga ctggcagaac ggggaagggg
     4501 caagcaatca ctggcgattg tcggtggtgg tggaatataa ccaggggcag cgtgtctcct
     4561 ccaatgagat cacgctaacg cttgtcgaac cgttcgatgc attgtcaaac gacgaactgc
     4621 gctgggaacc gtaatcagaa aatgcgctcc tgatgcaccc ataccgctgc ttccacgcga
     4681 gacttgagct tcattttctt cagcatgtgc ttgacgtgca cttttactgt gctttcggtg
     4741 atatccaggc ggcgggcaat catcttgttc ggcaaaccct gggcaatcag cttgagaata
     4801 tcgcgctcgc gtggggttaa ctggttaaca tcgcgctcag tagtggcacg gttagcgcgc
     4861 aagctggcgg ccagaacagg cgttaatgct tcgcttaata ccatttcgcc agcagctgcc
     4921 tgatgcaatg ctttcagcag atcttccggt tccatatctt ttaacagata accatccgcg
     4981 ccgcgtttca gtgcggtgac cacatcttct tcatggttag agacgctgaa taccacaatg
     5041 cgccctgaga gggacttttc gcgcagttta tccagcgttt ccagaccgtt catgccgggc
     5101 atattgagat ctaacaggat cagatcggga tcaagagact ccgccagttc aataccctgt
     5161 tcgccattac tcgcttcgcc aaccacggtg atatctggtg ccatactgat aagctgtttt
     5221 acgccagttc gcagcatcgg gtgatcgtcg atcagcagga tagtagccgg ttcctgatta
     5281 ctcatgggta tctccttgga cgtctgtgaa agttttttcg ggaataaagg tgaccaccac
     5341 ttcggtgcca cctgattcac gacggcggac gcggcaatcg cctcgtaaac tttgcgcacg
     5401 gtcgcgcatt attatcatgc cgtagtgatt gctgcggatg gcattttcag gcacgccgca
     5461 gccgttatct tggacggtca gtttgacctg attatcgttt tgcgccaccg tcaccacgac
     5521 ctcactcgct tgcgaatgtt tgagggcgtt acttaatgcc tcacgggcaa tttgcaacaa
     5581 gtggattgcc tgatgtgaag gcaccagacg aggcggcaat tgataatcca gcttcaccgg
     5641 gaagccaaat ttggcgctgt actcttcgca actcgcctcc agcgccggac gtaatccagg
     5701 ctcggtgagc tgcaagcgga atgtggtgag caattcacgc aactgcgccc aggatgcatt
     5761 cagttcgtta cggatctgac ttaacagttc gcggctgctt gctggcagcg catcgccctg
     5821 catctgtaaa caactcacct gcatcttcat gcaagagaga gattgggcaa tagaatcatg
     5881 cagttcgcgc gcaatggtgg cacgctcttc catcacgatc aactgttgct gacgttcctg
     5941 atggcgatcc agcgccagcg tggcggtgag ttgttcaacc agggtatcca ccagttgttg
     6001 ttgatcatgg ctaagatgac gcccctgcgg cagggtcgcc agcaaaatac cgtactgcgt
     6061 atgagagtca gccagccgcc acttcagggt tgtgccgcga tcaccaacgg gtaatacgcc
     6121 gcgcgggcag agctggcagc ctttatcatc acaagtcata tctggctggc aggtaaactc
     6181 ctgatgattc tcttcatcat cagtgtcata cacccgcagt tcgatatcac gtagcagggt
     6241 taaattctgt aagccgttga gtacaggtga caggcgttca cacagcgggg cgcgggaatg
     6301 caaacggcgg ttagcctgcc ataaaaaaga gaggatctga tttttatgct ccagcccggc
     6361 ggttttctcc tgaacccgct gctcaagtac ggcataactt tcggccagtt ctgcagacat
     6421 attgttcaat gcagttccaa gcatcgccat ttcgttgcgc ccgctgatgt tcgcgcgttg
     6481 ggtaaaatcg cgatgactga cggcactcgc cattgccagc agttgccgcc acggttgtag
     6541 cagtcgcacc cgcaaccaga taatagtgaa caccagtaaa agtgccataa ataccgccat
     6601 tacccgatgg accagtacca ctgtctcaat gcgcatttcc gtggtgcggt caaaaccaga
     6661 taccagctga tcaagcccgg caacaaactg gctgacatcc gctgacaccg tttcgcggtt
     6721 ttgtgcacgc atcagtgcag ggatcagttc attacgccag taatcttgta aaccctgtaa
     6781 ttgcgccagt tgttcgtctc gttctgctgc tcgagttaac tcggcgctaa atgccgtttg
     6841 ttccatctct ttaattaagg gcttgtcttt ctcacttaat ggcactgccg ccaacagacg
     6901 gtaactttgc atgcgcagcg atcccgcttt gttgatcgca tgggcgctgc cctgaacgcc
     6961 ttgcaccagc cagccagaaa ccgccatccc tgccagtcca atagcagtag aaagcaacac
     7021 aataagcgca acctgattaa ccagggtgag cggagagaga caacgtttaa gcatgtaaac
     7081 ctcttccttc aggctttaaa tgagcaataa ccttaatgaa tgtgacgata cattctggaa
     7141 tggcagtatt ctcggctatt ggctgaagta tacccatacc cggaaagagt tactccttat
     7201 ttgccgtgtg gttagtcgct ttacatcggt aagggtaggg attttacagc accgtgaaaa
     7261 atctcataat ttttatgaaa tcactgtact cactatgggt aatgataaat atcaatgata
     7321 gataaagtta tcttatcgtt tgatttacat caaattgcct ttagctacag acactaaggt
     7381 ggcagacatc gaaacgagta tcagaggtgt ctatgagtca ctcatccgcc cccgaaaggg
     7441 ctactggagc tgtcattaca gattggcgac cggaagatcc tgcgttctgg caacaacgcg
     7501 gtcaacgtat tgccagccgt aacctgtgga tttccgttcc ctgtctgctg ctggcgtttt
     7561 gcgtatggat gttgttcagc gctgttgcgg tgaacttacc gaaagtcggt tttaatttta
     7621 cgaccgatca gctatttatg ttgactgcgc tgccttcggt ttctggcgcg ttattacgtg
     7681 ttccatactc ctttatggtt cctatcttcg gtggtcgtcg ctggacggcg ttcagcaccg
     7741 gtattctgat tattccttgc gtctggctgg gttttgccgt gcaggatacc tccacgcctt
     7801 atagcgtctt catcatcatc tctctgctat gcggctttgc tggcgcgaac ttcgcatcca
     7861 gtatggcaaa catcagcttc ttctttccga aacagaagca gggtggcgcg ctgggtctga
     7921 atggtggtct gggaaacatg ggcgtcagcg tcatgcagtt ggttgctccg ctggtggtat
     7981 cactgtcgat tttcgcagta tttggtagcc agggcgtcaa acagccggat gggactgagc
     8041 tgtatctggc gaatgcgtcc tggatatggg tgccgttcct tgccatcttc accattgcgg
     8101 cgtggtttgg catgaacgat cttgctacct cgaaagcctc catcaaggag cagttgccgg
     8161 tactcaaacg gggtcatctg tggattatga gcctgctgta tctggcaacc ttcggctcct
     8221 tcatcggctt ctccgcgggc tttgcaatgc tgtcaaaaac gcagttcccg gatgttcaga
     8281 ttctgcaata cgctttcttc gggccgttta ttggtgcgct ggcgcgttct gcaggtggtg
     8341 cattatctga ccgtctgggc ggaactcgtg tcacgctggt gaactttatt ctgatggcga
     8401 ttttcagcgg cctgctgttc ctgaccttac cgactgacgg gcagggcgga agcttcatgg
     8461 cgttcttcgc ggtcttcctg gcgctgttcc tgacagctgg gctgggtagt ggttccactt
     8521 tccagatgat ttcagtgatc ttccgtaaac tgacaatgga tcgcgtgaaa gcagaagggg
     8581 gttctgacga acgtgcgatg cgtgaagcgg caaccgacac ggcggcggcg ctgggtttca
     8641 tctctgcgat tggcgcgatt ggtggcttct ttatcccgaa agcgtttggt agctcgctgg
     8701 cattaacggg ttcgccagtc ggcgcaatga aggtattttt gattttctat atcgcctgcg
     8761 tagtgattac ctgggcggta tatggtcggc attctaaaaa ataaaccgtt actcgtcata
     8821 ctccgggtta catgtgctgc ggctgcgttc attcacccca gtcacttact ttagtaagct
     8881 cctgggattc attcacttgc cgccttcctg taaaccgaat tatatagagt aaaatatttg
     8941 attatccttt gcgcggcatg atgtcgcgct ttttttaagc gttatttagt tacaacatac
     9001 taatgttata tggtttattt cgccggattt cattaagagc cattaatatg ttacccatgg
     9061 ggaatactcc ttaataccca tctgcataaa aatcttaata gtttaaataa ctacaggtat
     9121 aaaacgtctt aatttacagt ctgttatgtg gtggctgttg attatcctaa aggggtatct
     9181 taggaattta ctttattttt catccccatc actcttgatc gttatcaatt cccacgctgt
     9241 ttcagagcgt taccttgccc ttaaacatta gcaatgtcga tttatcagag ggccgacagg
     9301 ctcccacagg agaaaaccga tgagtaaatt cctggaccgg tttcgctact tcaaacagaa
     9361 gggtgaaacc tttgccgatg ggcatggcca gcttctcaat accaaccgtg actgggagga
     9421 tggatatcgc cagcgttggc agcatgacaa aatcgtccgc tctacccacg gggtaaactg
     9481 caccggctcc tgcagctgga aaatctacgt caaaaacggt ctggtcacct gggaaaccca
     9541 gcagactgac tatccgcgta cccgtccgga tctgccaaac catgaacctc gcggctgccc
     9601 gcgcggtgcc agctactcct ggtatcttta cagtgccaac cgcctgaaat acccgatgat
     9661 gcgcaaacgc ctgatgaaaa tgtggcgtga agcgaaggcg ctgcatagcg atccggttga
     9721 ggcatgggct tctatcattg aagacgccga taaagcgaaa agctttaagc aggcgcgtgg
     9781 acgcggtgga tttgttcgtt cttcctggca ggaggtgaac gaactgatcg ccgcatctaa
     9841 cgtttacacc atcaaaaact acggcccgga ccgtgttgct ggtttctcgc caattccggc
     9901 aatgtcgatg gtttcttacg catcgggtgc acgctatctc tcgctgattg gcggtacttg
     9961 cttaagcttc tacgactggt actgcgacct gcctcctgcg tctccgcaaa cctggggcga
    10021 gcaaactgac gtaccggaat ctgctgactg gtataactcc agctacatca tcgcctgggg
    10081 ttcaaacgtg ccgcagacgc gtaccccgga tgctcacttc tttactgaag tgcgttacaa
    10141 aggcaccaaa actgttgccg tcacaccaga ctacgctgaa atcgccaaac tgtgcgatct
    10201 gtggctggca ccgaaacagg gcaccgatgc ggcaatggcg ctggcgatgg gccacgtaat
    10261 gctgcgtgaa ttccacctcg acaacccaag ccagtatttc accgactatg tgcgtcgcta
    10321 caccgacatg ccgatgctgg tgatgctgga agaacgcgac ggttactacg ctgcaggtcg
    10381 tatgctgcgc gctgctgatc tggttgatgc gctgggccag gaaaacaatc cggaatggaa
    10441 aactgtcgcc tttaatacca atggcgaaat ggttgcgccg aacggttcta ttggcttccg
    10501 ctggggcgag aagggcaaat ggaatcttga gcagcgcgac ggcaaaactg gcgaagaaac
    10561 cgagctgcaa ctgagcctgc tgggtagcca agatgagatc gctgaggtag gcttcccgta
    10621 ctttggtggc gacggcacgg aacacttcaa caaagtggaa ctggaaaacg tgctgctgca
    10681 caaactgccg gtgaaacgcc tgcaactggc tgatggcagc accgccctgg tgaccaccgt
    10741 ttatgatctg acgctggcaa actacggtct ggaacgtggc ctgaacgacg ttaactgtgc
    10801 aaccagctat gacgatgtga aagcttatac cccggcctgg gccgagcaga ttaccggcgt
    10861 ttctcgcagc cagattattc gcatcgcccg tgaatttgcc gataacgctg ataaaacgca
    10921 cggtcgttcg atgattatcg tcggtgcggg gctgaaccac tggtatcacc tcgatatgaa
    10981 ctatcgtggt ctgatcaaca tgctgatttt ctgcggctgt gtcggtcaga gcgggggcgg
    11041 ctgggcgcac tatgtaggtc aggaaaaact gcgtccgcaa accggctggc agccgctggc
    11101 gtttgccctt gactggcagc gtccggcgcg tcacatgaac agcacttctt atttctataa
    11161 ccactccagc cagtggcgtt atgaaaccgt cacggcggaa gagttgctgt caccgatggc
    11221 ggacaaatcc cgctataccg gacacttgat cgactttaac gtccgtgcgg aacgcatggg
    11281 ctggctgccg tctgcaccgc agttaggcac taacccgctg actatcgctg gcgaagcgga
    11341 aaaagccggg atgaatccgg tggactatac ggtgaaatcc ctgaaagagg gttccatccg
    11401 ttttgcggca gaacaaccag aaaacggtaa aaaccacccg cgcaacctgt tcatctggcg
    11461 ttctaacctg ctcggttctt ccggtaaagg tcatgagttt atgctcaagt acctgctggg
    11521 gacggagcac ggtatccagg gtaaagatct ggggcaacag ggcggcgtga agccggaaga
    11581 agtggactgg caggacaatg gtctggaagg caagctggat ctggtggtta cgctggactt
    11641 ccgtctgtcg agcacctgtc tctattccga catcattttg ccgacggcga cctggtacga
    11701 aaaagacgac atgaatactt cggatatgca tccgtttatt cacccgctgt ctgcggcggt
    11761 cgatccggcc tgggaagcga aaagcgactg ggaaatctac aaagccatcg cgaagaaatt
    11821 ctccgaagtg tgcgtcggcc atctgggtaa agaaaccgac atcgtcacgc tgcctatcca
    11881 gcatgactct gccgctgaac tggcgcagcc gctggatgtg aaagactgga aaaaaggcga
    11941 gtgcgacctg atcccaggta aaaccgcgcc acacattatg gtcgtagagc gcgcttatcc
    12001 ggcgacttac gaacgcttta cctctatcgg cccgctgatg gagaaaatcg gtaatggcgg
    12061 taaagggatt gcctggaaca cccagagcga gatggatctg ctgcgtaagc tcaactacac
    12121 caaagcggaa ggtccggcga aaggccagcc gatgctgaac accgcaattg atgcggcaga
    12181 gatgatcctg acactggcac cggaaaccaa cggtcaggta gccgtgaaag cctgggctgc
    12241 cctgagcgaa tttaccggtc gtgaccatac gcatctggcg ctgaataaag aagacgagaa
    12301 gatccgcttc cgcgatattc aggcacagcc gcgcaaaatt atctccagcc cgacctggtc
    12361 tggtctggaa gatgaacacg tttcttacaa cgccggttac accaacgttc acgagctgat
    12421 cccatggcgt acgctctctg gtcgtcagca actgtatcag gatcaccagt ggatgcgtga
    12481 tttcggtgaa agcctgctgg tttatcgtcc gccgatcgac acccgttcgg tgaaagaagt
    12541 gataggccag aaatccaacg gcaacccgga aaaagcgctc aacttcctga cgccgcacca
    12601 gaagtggggg atccactcca cctacagcga caaccagttg atgctgacct taggtcgcgg
    12661 tggcccggtg gtctggctga gcgaagccga tgccaaagag ctgggcattg ccgataacga
    12721 ctggattgaa gtttacaaca gcaacggtgc gctgactgcc cgtgcggttg tcagccagcg
    12781 tgttccggca gggatgacca tgatgtacca cgcgcaggaa cgtatcgtta acctgccggg
    12841 ttcggaaatt actggccagc gtggggggat ccacaactcg gtcacccgta tcacgccgaa
    12901 accgacgcat atgattggtg gctatgccca tctggcatac ggctttaact actacggcac
    12961 cgtaggttct aaccgcgatg agtttgttgt agtgcgtaag atgaagaaca ttgactggtt
    13021 agatggcgaa ggcaatgact aggtacagga gagcgtaaaa tgaaaattcg ttcacaagtc
    13081 ggcatggtgc tgaatctcga taagtgcatc ggctgccaca cctgttcagt tacctgtaaa
    13141 aacgtctgga ccagccgtga aggcgtggag tacgcgtggt tcaacaacgt ggaaaccaag
    13201 ccgggtcagg gcttcccgac tgactgggaa aaccaggaaa aatacaaagg cggctggatc
    13261 cgtaaaatca acggcaaact gcagccgcgc atgggtaacc gtgccatgtt gctgggtaaa
    13321 atcttcgcta acccgcatct gccggggatc gacgattatt acgagccgtt cgattttgac
    13381 tatcagaacc tgcataccgc gccggaaggc agcaaatcgc agccgattgc ccgtccccgt
    13441 tcgctgatta ccggggaacg gatggcgaaa atcgaaaaag ggccgaactg ggaagatgac
    13501 ctgggtggtg agtttgacaa actggcgaaa gacaagaact tcgacaacat ccagaaggcg
    13561 atgtatagcc agttcgaaaa cacctttatg atgtatttgc cgcgcctgtg cgaacactgc
    13621 ctgaacccgg catgtgtggc gacctgcccg agcggtgcga tttacaagcg tgaagaagat
    13681 ggcatcgtcc tgatcgacca ggataaatgc cgtggctggc gtatgtgcat caccggatgc
    13741 ccgtacaaaa aaatctactt caactggaag agcggtaagt ctgagaagtg catcttctgc
    13801 tatccgcgta ttgaagcggg tcagccgacc gtgtgctcag aaacctgtgt cggtcgtatc
    13861 cgttatcttg gcgtgctgct gtacgatgcc gacgcgattg aacgtgcagc cagcaccgag
    13921 aacgagaaag atctttacca gcgtcagctg gaggtgttcc tcgatccgaa cgatccgaaa
    13981 gtcatcgagc aggcgattaa agacggtatt ccgctgagcg ttattgaagc cgcacagcag
    14041 tcgccggttt ataaaatggc aatggaatgg aaactggcgc tgccgctgca tccagaatat
    14101 cgcacactgc cgatggtctg gtacgtgccg cctctgtctc cgattcagtc tgcagcagac
    14161 gcgggtgagc tgggtagcaa cggcattctg ccagacgtcg aaagcttgcg tattccggta
    14221 cagtatctgg cgaatctgct gaccgccggt gataccaaac cggtactgcg cgcactgaaa
    14281 cgtatgctgg cgatgcgtca ttacaaacgt gctgaaaccg ttgacggtaa agttgatacc
    14341 cgtgcgctgg aagaggtcgg tctgaccgaa gcccaggcac aggagatgta ccgttatctg
    14401 gctattgcta actacgaaga tcgctttgtg gtgccgagta gtcatcgtga actggcacgg
    14461 gaagccttcc cggagaaaaa tggctgcggc tttacctttg gtgatggctg ccacggctca
    14521 gataccaaat tcaatctgtt caacagccgt cgtatcgatg ccatcgatgt gaccagcaaa
    14581 acggagccgc atccatgatc gaactcgtga ttgtatcgcg tctccttgaa tatccggatg
    14641 ctgccttatg gcagcatcaa caagagatgt ttgaggtgat tgctgcgtcg aaaaatctgt
    14701 cgaaagaaga tgcccatgcg ctgggcattt tcctgcgcga tttaacggcg atggatccgc
    14761 tcgatgccca ggcccagtac agcgaactgt tcgaccgtgg ccgcgccacg tcactgttgc
    14821 tatttgaaca tgttcacggt gaatcccgtg accgcggcca ggcgatggtg gacctgctgg
    14881 cgcagtacga gcagcacggc ttgcagttaa acagccgcga attaccggac catctgccgc
    14941 tgtatctgga gtacctgtcg cagctgccgc aaagcgaagc cgtggaaggt ttgaaagata
    15001 tcgcgccgat tctggcattg ctgagcgcgc gtctgcaaca gcgtgaaagc cgttatgccg
    15061 tgatgtttga tctgctgctg aaattggcca ataccgctat cgacagcgac aaagtggcgg
    15121 aaaaaattgc cgacgaagcg cgcgatgata cgccgcaggc gctggatgct gtctgggaag
    15181 aagagcaggt taaattcttt gctgacaaag gctgcggtga ttcagcaatc actgctcatc
    15241 agcgtcgctt tgccggtgcc gtcgcgccgc aatatctgaa tatcaccacc ggaggacagc
    15301 actaatgcaa ttcctgaata tgttcttctt tgatatctac ccgtacatag ccggggcggt
    15361 cttcctgatt ggtagctggc tgcgttatga ctacgggcag tacacctggc gcgcggcgtc
    15421 cagccagatg ctggatcgca aagggatgaa cctggcgtcg aacctgttcc atatcggtat
    15481 tctggggatt tttgctggtc acttcttcgg tatgctgacg ccgcactgga tgtatgaagc
    15541 ctggctgccg attgaagtga aacagaaaat ggcgatgttt gctggtggtg ccagcggcgt
    15601 gctgtgtctg attggcggcg tgctgttgct gaagcgtcgt ctgttcagcc cacgcgtgcg
    15661 tgcaaccact accggagcgg atatcctgat cctgtcgctg ctcgttatcc agtgcgcgct
    15721 gggcctgttg accattccgt tctccgctca gcatatggac ggtagcgaga tgatgaaact
    15781 ggttggctgg gcgcagtcgg tggtgacctt ccacggtggc gcttctcaac acctcgatgg
    15841 tgtggcgttt atcttccgtc tgcacctggt gctggggatg acgttattcc tgctgttccc
    15901 gttctcgcgt ctggtacaca tctggagcgt accggtggag tatctgacac gtaagtacca
    15961 gctggtgcgc gctcgtcact aaacgaattt tagttcacat agaccctgct tcggcggggt
    16021 tttttatggg cacggtgcgg ggtgagttgt cggatgcgct tcgcttatcc gacctacagg
    16081 ggaggatatt gtaggcccgg taaacgtggt gccatcgggc aaaattagct cggagtaaca
    16141 ggttttgatt attcaaggag gcgatggtgg tgggggaagg attactcagc gctgcgcgct
    16201 tcgcccttcg ggtcgttgcc tgcggcaacg ctctctcgct ggcgctcaag tcgaaccttg
    16261 gtcgaagctt ctcatccttc cccgcttggg cagaatattt aattgcggat tcgtttgaga
    16321 gtttacggac ttttgaaaag
//
LOCUS       DADMIB010000094        15966 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.094, whole genome shotgun sequence.
ACCESSION   DADMIB010000094 DADMIB010000000
VERSION     DADMIB010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15966
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.094"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..243)
                     /locus_tag="JNZ89_002734"
     CDS             complement(<1..243)
                     /locus_tag="JNZ89_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000100289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY8936553.1"
                     /translation="MSSWLAMLQDAAEMFVFLAVELSLLFIVISAGVSLIRQKVPDHK
                     IQQMMGARKGRGYLLAALLGAVTPFCSCSTIPMLRGL"
     gene            350..646
                     /locus_tag="JNZ89_002735"
     CDS             350..646
                     /locus_tag="JNZ89_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8936554.1"
                     /translation="MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGI
                     PGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA"
     gene            complement(780..1205)
                     /gene="arsC"
                     /locus_tag="JNZ89_002736"
     CDS             complement(780..1205)
                     /gene="arsC"
                     /locus_tag="JNZ89_002736"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-dependent arsenate reductase"
                     /protein_id="HAY8936555.1"
                     /translation="MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDEL
                     VKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLG
                     TRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK"
     gene            complement(1218..2507)
                     /gene="arsB"
                     /locus_tag="JNZ89_002737"
     CDS             complement(1218..2507)
                     /gene="arsB"
                     /locus_tag="JNZ89_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite/antimonite:H(+) antiporter ArsB"
                     /protein_id="HAY8936556.1"
                     /translation="MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPG
                     DIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLG
                     AAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
                     NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAI
                     KDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLR
                     GAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSI
                     MNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQ
                     KNMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL"
     gene            complement(2562..2915)
                     /gene="arsR"
                     /locus_tag="JNZ89_002738"
     CDS             complement(2562..2915)
                     /gene="arsR"
                     /locus_tag="JNZ89_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="As(III)-sensing metalloregulatory
                     transcriptional repressor ArsR"
                     /protein_id="HAY8936557.1"
                     /translation="MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQ
                     PKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRN
                     LARQNCSADSKNICS"
     gene            3654..3737
                     /locus_tag="JNZ89_002739"
     CDS             3654..3737
                     /locus_tag="JNZ89_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Damage inducible protein"
                     /protein_id="HAY8936558.1"
                     /translation="MIDKAIIVLGALIALLELIRFLLQLLN"
     gene            complement(3791..5143)
                     /gene="gorA"
                     /locus_tag="JNZ89_002740"
     CDS             complement(3791..5143)
                     /gene="gorA"
                     /locus_tag="JNZ89_002740"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HAY8936559.1"
                     /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
                     VGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENV
                     LGKNNVDVIKGFARFVDAKMLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGF
                     FALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVM
                     NAEGPQLHTNAIPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAG
                     VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSEHLFNNKPDEHL
                     DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK
                     LVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
                     "
     gene            complement(5215..6057)
                     /locus_tag="JNZ89_002741"
     CDS             complement(5215..6057)
                     /locus_tag="JNZ89_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HAY8936560.1"
                     /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAG
                     AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPL
                     IARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
                     ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRK
                     ILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATASW
                     IVPE"
     gene            6260..8302
                     /gene="prlC"
                     /locus_tag="JNZ89_002742"
     CDS             6260..8302
                     /gene="prlC"
                     /locus_tag="JNZ89_002742"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HAY8936561.1"
                     /translation="MTNPLLTPFELPPFSKILPEHVVPAVTQALNDCRENVERVVAQG
                     APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
                     HEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLS
                     ELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPS
                     YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFE
                     NYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
                     AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVR
                     FFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNR
                     PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
                     CWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFR
                     PDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
                     FSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG"
     gene            8310..9062
                     /gene="rsmJ"
                     /locus_tag="JNZ89_002743"
     CDS             8310..9062
                     /gene="rsmJ"
                     /locus_tag="JNZ89_002743"
                     /EC_number="2.1.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709277.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1516)-N(2))-methyltransferase
                     RsmJ"
                     /protein_id="HAY8936562.1"
                     /translation="MKICLIDETGAGDGALSVLAARWGLEHDEDNLMALVLTPEHLEL
                     RKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
                     AFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD
                     ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVK
                     RPDYAPPLANVTTPNAVVTKGHRFDIYAGTPV"
     gene            complement(9111..10580)
                     /gene="dtpB"
                     /locus_tag="JNZ89_002744"
     CDS             complement(9111..10580)
                     /gene="dtpB"
                     /locus_tag="JNZ89_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpB"
                     /protein_id="HAY8936563.1"
                     /translation="MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQ
                     LGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSL
                     LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIAL
                     SLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVL
                     LGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLML
                     EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINSVSFQALNPFWVVLASPILAGIYT
                     HLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG
                     ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLET
                     LPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH"
     gene            complement(10898..11332)
                     /gene="uspA"
                     /locus_tag="JNZ89_002745"
     CDS             complement(10898..11332)
                     /gene="uspA"
                     /locus_tag="JNZ89_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HAY8936564.1"
                     /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYS
                     DLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
                     DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
     gene            11723..12058
                     /gene="uspB"
                     /locus_tag="JNZ89_002746"
     CDS             11723..12058
                     /gene="uspB"
                     /locus_tag="JNZ89_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspB"
                     /protein_id="HAY8936565.1"
                     /translation="MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYV
                     DGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVV
                     SLIALMIWH"
     gene            complement(12302..13801)
                     /gene="pitA"
                     /locus_tag="JNZ89_002747"
     CDS             complement(12302..13801)
                     /gene="pitA"
                     /locus_tag="JNZ89_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitA"
                     /protein_id="HAY8936566.1"
                     /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLL
                     AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLI
                     VSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
                     IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQ
                     HPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSL
                     DQRSQMRRIMLCVSDTIDKVVKIPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVAL
                     ALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVL
                     SSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL"
     gene            14033..15235
                     /locus_tag="JNZ89_002748"
     CDS             14033..15235
                     /locus_tag="JNZ89_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HAY8936567.1"
                     /translation="MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILM
                     SGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLF
                     CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG
                     GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITA
                     ENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPN
                     QSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY
                     RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
                     DLIAAKSS"
     gene            complement(15550..>15966)
                     /locus_tag="JNZ89_002749"
     CDS             complement(15550..>15966)
                     /locus_tag="JNZ89_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2776 domain-containing protein"
                     /protein_id="HAY8936568.1"
                     /translation="QTRNTFSTKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLAP
                     GIILIYLGMICYSIFSKVWLLALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQ
                     TDMGYFIPSRVLVGLGAVCFTLFSIVSILEAGSAKK"
BASE COUNT         4056 a         4074 c         4169 g         3667 t
ORIGIN      
        1 caatccacgt aacatgggta ttgtcgagca actacagaac ggggtaacgg ctcccaacag
       61 agcagccagg agatagcctc tcccttttct ggcccccatc atctgctgga ttttatggtc
      121 tggcaccttt tgtcttatca ggctgacacc ggcactaatc actataaaca gcaacgaaag
      181 ctcgacggcg agaaacacaa acatctctgc ggcatcttgc agcatcgcaa gccaactact
      241 catacgtaac ctcattggat aaatctatat ttccagaata atcgaaatga aattcagatc
      301 aagatatttc tggtattatc gaaatatcaa ccagacagag gggtgtcata tgcagttgga
      361 agaagtcgct aaagcgctga aagagctagg tcacccgacc cgtttgttca tatttaaaca
      421 tcttgtcaaa gccggggaac aagggttgcc ggtcggtgag ttgcaaaagc agcttgggat
      481 acctggctcc acactcagcc accatatatc agcactggta tcggtaggac tggtcaaaca
      541 aaaccgtgag agtcggacgc tgatgtgtgt ttcgcaatac gcaatgctgg aagcgataat
      601 tgaattctta cgcgaggagt gctgcgtaaa tagcaaaatt gcctgatgcg ctacgctcta
      661 catatttcat gccatatatt gaatttgcac ggttttgtag gtcggataag acgcgttagc
      721 gtcgcatccg acataaacaa agcgcacttt accaactatc ggcagtggat atcgccgctt
      781 tatttcaggc gcttacccgc ttcatcaacc actttctcgc catcttcctt ggagaatgcg
      841 cctttttgcg catctggcag aatttccagc accacttctg aagggcggca caggcgagtt
      901 cccagcggcg tcaccacaat cgggcgatta atcagaatcg ggtgctgaag cataaagtcg
      961 attaaccgat cgtcagtaaa tttatcttcc gcaaggccca gctcctcata cggttcgacg
     1021 tttttacgca gcagcgcgcg tacggaaatc cccatatcgg caatgagttt gaccagttca
     1081 tcgcgcgttg gcggagtttc cagataatgg ataatggtcg gttctgtgcc gctgttgcgg
     1141 atcatctcca gcgtattacg cgacgtgccg caggccgggt tgtgataaat ggtaatgttg
     1201 ctcatatcag tatctcatta caaagtgaaa gagagacgta gcgccagcgc agccagcgtc
     1261 acaaacagca caggcagggt catgataatc cctgtacgga agtaatatcc ccagctgata
     1321 gtcatattct tctgcgaaag tacgtgcagc cagagtagtg tagccaggct accaattggg
     1381 gtaattttcg gtcccaaatc gcagccaatc acattggcat aaaccatcgc ttctttgata
     1441 acgccagatg ccgtgctgcc atcaatggac aacgcgccaa ccagtaccgt cggcatattg
     1501 ttcataatag aagagaggaa ggcggtgagg aatccggtgc cgagcgtcgc ggcccacagg
     1561 ccgttatccg ccagcacgtt gagtacgcca gaaagatatt ccgttaatcc ggcattgcgc
     1621 aggccataaa ccaccagata catgccgagc gagaagatga caatttgcca gggggcaccg
     1681 cgcaggactt tacccgtatt aatcgcatga ccgcgtttag cgacgacaaa taatatcagc
     1741 gcgcccacag ctgcaatggc gctcaccgga atgccgagcg gttccaggac gaaaaatccc
     1801 accagcagaa gcagtaaaac aacccagcca gttttgaacg tagcaggatc tttgatcgct
     1861 tctgcgggag atttcagcag cgccatatcg tagttctgcg gaatatcttt gcgaaaatag
     1921 agatgtagca tcaccagcgt ggcaacaatc gcggcgatat ccaccggcac catcaccgag
     1981 gcgtattcgc gaaagccgag gccaaagaaa tcagcggaaa cgatattcac caggttggag
     2041 acaataagcg gcaggctggc ggtatcggca atgaatccgg ccgccatcac gaacgccagc
     2101 gtcgtgcctt tactgaatcc taaagccagc agcatggcga tgacaatcgg cgtcaaaata
     2161 agcgctgcgc catcattggc aaacagggcg gcaacggcag caccgagcag gacaatccag
     2221 gtaaacagca agcgaccacg accattaccc cagcgtgaga cgtgcagcgc cgcccattca
     2281 aaaaagccgg actcatccag cagcaggctg atgataatga cggcgataaa cgcagccgtc
     2341 gcgttccaga cgatattcca caccaccgga atatcacccg gatggaccac gcccgtaact
     2401 aacgctagta ctgcgccgag cgttgcactc cagccgatgc ctaaaccttt cggctgccag
     2461 ataaccaata caatggtcag gacaaagata gcgcctgcca gtaacataat gcctcctgga
     2521 taaaacacat gcgaaaatac atatgtgttt agctaaattt tttaactgca aatgttctta
     2581 ctgtctgcgg aacagttttg tcgagccagg ttgcggacaa ttgcctgaat cttttcctgt
     2641 tcacatcgcc aggcttcatc aattattttc gccgcccatg ctggaatatg cggcgataag
     2701 cggtaatgaa cccatttacc ttgcttgcgg tccagcaata gcccgctttc acgcagcaat
     2761 gccaggtggc gggagatctt gggctgcgac tggtcgagag cagtgcagag atcgcagacg
     2821 cataactctc ccagttcgct gagcagtaaa acgatgccca gacgggtttc atcagcaaga
     2881 attttgaaca attggatggg taacagaaat gacatattgc gctcctgatt gttgcaggta
     2941 gtgtctctct tcgaagcgga taactcaaaa acatatatga tttaacgaat gtgtaagtgc
     3001 agaggaaggt aataggtgtg aattttgagt tggctattca tttgaaagga ggtctgaatc
     3061 aggacgtaaa aaaaccgact ttgcgtcggt tttttacttt ccagccctga gttggtggct
     3121 ctggctggag tgagagagtt cttatctaac agctcaatac tattagccag tggctaacat
     3181 tgcaagaatt agcgatttct tcagctggcg gagggagcac ttcggtatat atcgcagtga
     3241 cgatttatat actttcactg ggtcatcgtc atattaagcc ttgtccgaat ccggatgtaa
     3301 aaaaccgact ttgcgtcggt tttttacttt ccagccctga gttggtggct ctgactggag
     3361 tgagatagcc atcatctaac gcatcaatgc taataccata ctgaaactat tgcaaggacg
     3421 tgctggtttt ataacctgca tgtactgtat gattatccag ttagctctga ggtattttca
     3481 ctctggcaat gcgcataaac gctttcaaag tcctggtcag aagtacgggt ggtgccgtta
     3541 actgatgctc tggccggagt gagagagttc ttatctaaca atgagacatg cgccgtgaca
     3601 ggcagtggat gagtaagcgg atgcattctc actccatcgc atggagaaaa cgggtgattg
     3661 ataaagcaat catcgttcta ggggcgttaa ttgcgctgct ggaactgatc cgctttctgc
     3721 ttcagcttct gaactgatag cggaaacgta attaagggct aagagcacac tactcttagc
     3781 cctttaacat ttaacgcatt gtcacgaact cttctgccgc cgttgggtga atggcgacgg
     3841 tattgtcgaa gtcttttttg gttgccccca tcttcagcgc caccgcgaag ccctgcaaca
     3901 tttcgtccat accaaagcca atgccgtgaa taccgacaat cttctcttcc gatccaacgc
     3961 acaccagctt catgcggcac ggctggcggt gagtggtgac ggcggtatac atcgcggtga
     4021 aagaggattt atacactttc acctgatcgt cgccatactg ctcgcgcgcc tgcggttccg
     4081 ttaaaccaac agtaccaatc ggcggatggc tgaagaccac ggtcggaatg ttgctgtaat
     4141 ccagatgctc atccggcttg ttattaaaca ggtgttcaga gagacggcga cccgctgcaa
     4201 ctgccaccgg tgtcagctcc actgcacccg tgttatcgcc caccgcgtaa ataccttcaa
     4261 tgttggtgtt ttgatattta tcgacgacga tatagccttt ttcgttggtt ttaacgccag
     4321 cggcttcgag gttgatgttg tcattggcag gctcgcgacc aatcgcccaa atcaggcaat
     4381 ccaccgtttc actgcgacca tcttccagct ccagcgtcag gctaccatcg gcatttttca
     4441 ctaccgcttt cgggatggcg ttggtgtgca gctgcgggcc ttcggcgttc atcacttcga
     4501 ccagcgtttc ggaaatcatc gggtcgaagc tgcgcagcgg cgcatgttta cgcacaaaca
     4561 gatgcgtttt cgcgccgagg ccgttaatca cgcccgccag ctcaacggcg atgtaacccg
     4621 cgccaacaac cgccacgcgc tctggcaaag caggaagggc gaagaagcca tcagaatcaa
     4681 taccgtattc cacgcccgga atatccgggt ggctcggacg accgcctgtg gcgatcagaa
     4741 tatgatcggc cgtgatggtt tcgccgttta cctccagcat tttggcatca acgaagcggg
     4801 caaagccttt gattacatca acgttatttt taccgagcac gttttcatag gaagtatgaa
     4861 tacggtcgat ataggcggta cggctggcga tcaacgtttc ccagttgaac ttgttgatgg
     4921 tggtatcgaa accataatca gggccgtaca tatggatcgc ttcacggatt tgcgccgcgt
     4981 gccacatcac ttttttcggc acgcagccga cgttcacgca ggtgccgccc agctctttgg
     5041 cttcaatcag tgcgcatttc tggccgtaca tagccgcgcg gttgatggag gctataccgc
     5101 cgctgccgcc gccgatggcg atgtaatcat agtgtttagt catgacagag tgtccttatc
     5161 gttgattacc gcgattgtag cgcgagacgt aataggtgcc agcaatggct gcaattactc
     5221 cggcacgatc cagcttgcgg tggcgtgccc ggtgcctgcc ggaaccagtt tgctgtgcag
     5281 ccacggcagc acgttattca tctgctgttc cagtttccac ggcgggttaa tcacaatcat
     5341 gccggaagcg gtcatgccac ggcgatcgct gtctggcagt accgccagtt caatttgcag
     5401 aattttgcga ataccggtcg cttccagatc gtggatcatg cgcttaattt gctgacgcag
     5461 caccaccgga taccacagtg cgtaagtacc agtggcgaaa cgtttgtaac cttctgctat
     5521 cccgctgacc accgcctgat agtcggtttt catttcatac ggcgggtcga taaggattaa
     5581 accacggcgg gaaaccggcg gcagtttggc cttaagctgc tggaaaccat cggctttttc
     5641 gacgcgcgca cggctgtctt tctgaaattc agaacgcagc aacgggtaat cgctcgggtg
     5701 cagttcggtc agttgcaggc tgtcttgttc gcgcagtagc tggcgagcaa tcaatggcga
     5761 accggggtag taacgcaact gaccgctacg gttgaagtgt tttaccacat tgatgtacgc
     5821 ctccagttct gcgggcaaat cgtcctgctg ccagatacgg gcgatgcctt cgagatattc
     5881 gccggtacgc tcggcatgtt cgctgcctaa ctgataacgc ccggcccctg cgtgggtgtc
     5941 gagatagaga aacggtttat ctttctcttt cagcgactcg atgatcaggc tctgaacggt
     6001 atgtttaagg acgtcggcgt ggttgccagc gtgaaagctg tggcgataac tgagcatggg
     6061 taaaggtgtt ccggtaagta aaaatcggcc cgtattcggg gcgcacaaaa gcgtatcagg
     6121 acagtatacc gaaaagaggc cgccgccgcg aaagcgtaac gtttctcatt gaaattcact
     6181 acacttaacc ccatgctaca cacattatgt aaagcgcctg ttgagcgctt ccttaacctc
     6241 tttaaccagg actgcgcgaa tgacgaatcc gttactgact ccctttgaat tgcctccgtt
     6301 ttctaaaatt ctcccggaac atgtcgttcc agccgtgact caggcgctga acgattgccg
     6361 cgaaaatgtg gagcgcgtag tagcgcaagg ggcaccgtac acctgggaaa atctctgcca
     6421 gccgttggcg gaagtggacg atgtgttggg gcgtatcttc tccccggtca gccacctgaa
     6481 ctcggtgaaa aatagcccgg aactgcgtga agcctacgag caaaccctgc cgctgctgtc
     6541 ggaatacagc acctgggtag ggcaacatga agggctgtat aaagcgtacc gcgacctgcg
     6601 cgatggcgat cattacgcca cgctgaacac ggcgcagaag aaagcggttg ataacgccct
     6661 gcgtgatttt gaactctctg gcataggtct gccgaaagag aaacagcagc gttacggcga
     6721 aattgcgacc cgtctttctg aactgggcaa ccagtacagc aacaacgtcc tcgatgcgac
     6781 aatgggctgg accaaactcg ttaccgacga agcggagctg gcggggatgc ctgaaagcgc
     6841 gctggctgcg gcaaaagccc aggccgaagc gaaagagctg gaaggctacc tgctgacgct
     6901 ggatatccca agctacctgc cggtaatgac ctactgcgac aaccaggcct tgcgtgaaga
     6961 gatgtatcgc gcttacagca cccgcgcctc cgatcaaggc ccgaacgccg gtaaatggga
     7021 taacagcaag gtgatggaag agatcctcgc tctgcgtcac gaactggcgc aactgctggg
     7081 ctttgaaaac tacgccttta aatcccttgc cactaaaatg gcagaaaacc cgcagcaggt
     7141 gctggatttc ttaaccgatc tggcaaaacg cgcgcgtccg caaggcgaaa aagagctggc
     7201 acaactgcgc gccttcgcca aagcggaatt tggcgtcgat gagttgcagc cgtgggatat
     7261 cgcgtactac agcgaaaaac aaaaacagca cctctacagc atcagtgacg aacagctgcg
     7321 tccgtacttc ccggaaaaca aagcggttaa cggcctgttt gaagtggtga aacgtattta
     7381 cggcatcacc gctaaagagc gtaaagatgt tgatgtctgg catccggatg tacgtttctt
     7441 cgaactgtat gacgagaaca acgaactgcg cggcagcttc tacctcgatc tgtatgcccg
     7501 tgaaaacaag cgcggcgggg cgtggatgga tgactgcgta ggccagatgc gtaaagctga
     7561 cggttctctg caaaaaccgg tcgcgtattt gacttgtaac ttcaaccgcc cggtaaatgg
     7621 taaaccggcg ctgttcactc acgacgaagt gatcaccctg ttccacgagt tcggtcacgg
     7681 cctgcaccat atgctgaccc gcatcgaaac cgctggtgtt tccggtatca gcggtgtgcc
     7741 gtgggatgcg gtcgaactgc cgagtcagtt tatggaaaac tggtgctggg agccggaggc
     7801 gctggcgttt atctctggtc actatgaaac cggcgaaccg ctgccgaaag agttgctgga
     7861 taaaatgctg gcggcgaaga actaccaggc ggcgctgttt attctgcgcc agctggagtt
     7921 cggcctgttc gatttccgcc tccatgccga gttccgcccg gatcagggtg cgaaaatcct
     7981 cgaaactctg gcagaaatca agaaactggt tgccgtagta ccgtctccat cctggggccg
     8041 tttcccgcac gctttcagcc atattttcgc cggtggttat gccgcaggtt actacagcta
     8101 cctgtgggct gacgtactgg cggcagatgc cttctcgcgc tttgaggaag agggcatttt
     8161 caaccgtgaa accgggcagt cgttcctcga caacattctg agccgtggcg gttcagaaga
     8221 gccgatggat ctgttcaaac gcttccgtgg tcgtgaaccg cagctggatg cgatgctgga
     8281 gcattacggc attaagggct gatcattcag tgaaaatctg cttaattgat gaaacaggcg
     8341 ccggagacgg cgccttatct gttctggcgg cccgctgggg gctggagcac gatgaagaca
     8401 acctgatggc gctggtgtta acgccggaac atctggaatt gcgcaagcgt gatgagccaa
     8461 aacttggcgg catctttgtt gattttgttg gcggagcgat ggcgcaccga cgcaaattcg
     8521 gcggtggtcg cggtgaggcg gtggcgaaag cggtgggcat taaaggcgat tatttgccgg
     8581 atgtggtgga cgccaccgca gggctggggc gcgatgcctt tgtactggct tcagtcggct
     8641 gccgcgtgcg gatgctggag cgtaatccag tggttgccgc gctactcgac gacggcctgg
     8701 cgcgtggtta tgcggatgcg gaaatcggcg gctggttgca ggagcggttg cagttaattc
     8761 acgcctccag cctgacggcg ctaaccgata ttaccccacg cccgcaggtg gtctatctcg
     8821 atccgatgtt cccgcataag cagaaaagcg cgctagtgaa aaaagagatg cgtgtctttc
     8881 agtcgctggt gggaccggat cttgatgccg atggattact ggagcctgca cgcttgctgg
     8941 cgaccaaacg cgtggtggta aagcgcccgg actacgcgcc accgctagcg aatgtcacca
     9001 cgccaaacgc ggttgtgact aaagggcatc gctttgatat ctatgcaggt acgcccgtgt
     9061 aaaagtaaag cagggtagcg ataacgctac cctgctttct gcaagaataa ttaatggctt
     9121 tccggcgtcg caatcatgcg tttcagccac ggcaccatca acagcatcac tactgcaacg
     9181 cccagcgtga ccagaccaat cttaccaaac acgttggtat agacgggcaa cgtctcaagc
     9241 ggatcggtaa tgttgtccgg caccgcggta aatgttgcca catagccgcc cagcaagaac
     9301 gcggcagcct gcgtcaggaa ccacatcccg agaataaagc ccatcaaatg ctgcggcacc
     9361 agggcagcaa tcatcgccag gccaagggcg ctaataaaca gttcacctaa gctctggaat
     9421 aagtacacca gcacgataaa ccatggcgat gtcagccctt gtgcatccgc aaaccacatt
     9481 cccgcagctg ccgccgtcaa aaagcccagt gagcacataa acatgccgag agtaaatttc
     9541 atcggcatcg agaggtcttt gcctttgtta cccagatgcg tgtaaatgcc tgccagtatt
     9601 gggctggcga gtaccaccca gaacgggtta agcgcctgga agctgaccga gttgatggaa
     9661 aaaccgagaa tttcatgatg cacgttgttg atggcaaaga agttcagcga tgttggcatc
     9721 tgggcgtaga gaatgtaaaa caccaccgct tcgagcatca ggacaaaggc gacaaacatt
     9781 ttattgcgcc cggttttatc cagcttgaat gcctgacgaa agaagatgat ggtgacgacg
     9841 atggagagaa caatcagcac cagattggcg acttctacgt tgtgcatcag ccatgcacat
     9901 acgaagatca tcaccacgct gccaagtaat acgtacaaca gtttgctgaa gctcatcggc
     9961 ttgaagtcgg gttcagaacc aatgtctttc accattccac gacaggcgat gtaaaccagt
    10021 aatgcgataa ttaaccccgc cccgcacagg ttgtaggtga ctgaataacc gaatctatca
    10081 gcgatcacag gggccagcga taacgctatc aacgagccga tattgatcga catatagaac
    10141 agggtgaatg cgccatcaag ccgcggatct ttcggcggat agcacttcga aagcaagctg
    10201 gctgggttag ctttaaacag gccgttaccg acagcgatag tccccagggc gatgaaaatc
    10261 aggtcaggct taagtagcga catgccggtc atgaagtagc caatcgccag cacaagtgct
    10321 ccgagaacaa tggtgcgttt ggtccccagc aggtggtcgc cgacatagcc gccaatggaa
    10381 atgaggccat agaccagcgc agcaaaagca ccaaaagtga caaaagcctg ctcttgcgag
    10441 aatccaagct gtttaacgaa gaaaaccgcc agtacgccct gcacgccgta gtagccgaat
    10501 cgctcccata actcgacaaa aaagatcatg aaaaatgggc gaggttgctg cagcatcccc
    10561 atgggtgttg ttgtattcat atttattaac cttccaatac catcctgaaa agtatgaacg
    10621 cgtaagggat aacgcgcgaa aaagtttaca tctgtcagag attcttaata ttgatgcggt
    10681 gaatggatta atacactatt acaacagaaa ataaccagct aatcacacta atgatggaaa
    10741 atatgatggt gttaaatgtt gtattggcag gagattttga ttgcgtacgc agatcgtagg
    10801 ccagataagg ggtttacgct gcatcaggta acaaggcgcg ccaaaaagca aaacgcccgc
    10861 atatgcgggc gttcaggaac acgtcgtgga gggaagatta ttcttcttcg tcgcgcagcg
    10921 gaacaatcag catatcaacg tgaacggtgt tgatcagctg acgtgcggaa gacatcagtt
    10981 tgctccagaa gtcctggtgg tgaccacaaa ccaccagatc catatcgtat ttcttgattg
    11041 catcgaccag aacctggccc aggtcgccgc tgccgctcag ggtttcagtg attgggtagc
    11101 ctgcattagt ggaaagctcg gtcagcgcat gatgtgtctc ttcagagatg cgtttctgca
    11161 tatcacccag attcacatca ataagcccgg tgtataggtc agagtagttt acatctacgt
    11221 ggatcagaga aactttcgca ttgtaggggc gagccataga gactgctttc tctaccagaa
    11281 ctttgctttc cggggagaga tcgaccgcga tgagaatgtg tttataagcc atagtgttac
    11341 tccttccata aagttgtcga tgactggcca gctagcgttt cttgtgccgt tacgtcaccc
    11401 gcgtcctgcg aactacgtgc gcggggctaa cccagccgta aagattcagt gttaagacca
    11461 tccttacctt atagcgaccc ggatgatccg tcaatccgcc ttgcttaccc gttagataaa
    11521 caaattttcg acatgaatat attgatagtg gttaaccttc tggaaaaaaa acaacctgat
    11581 ctcctacact atctatagag ccgctcggat gttggtcacc acaaaagcgg tttctccagg
    11641 acctggtgtt aactgattgg cagcgtatcg ggagcggtag ccccggggtg gaactccgcg
    11701 ggcaggtcgc cggggaggag gtatgataag caccgtcgca ttattttggg ctttatgtgt
    11761 cgtttgcatt gttaacatgg cgcgctattt ctcatcacta cgcgcgttgt tagtggtact
    11821 gcgtaactgc gatccattgc tctatcaata tgttgatgga gggggctttt ttacctcaca
    11881 tggccaaccc aacaaacagg tgcgtctcgt ttggtatatc tatgcccaac gttatcgcga
    11941 tcatcacgat gatgagttta ttcgccgctg tgagcgggtg cgtcggcagt ttattctgac
    12001 tagcgcattg tgtggtctgg tggtggtcag cctgattgca ttgatgattt ggcattaagc
    12061 acttcagcaa taataacgca taaaaaaagc tggccagtaa actgacccgc tcgagactga
    12121 ttacaaacgc aaaattgcct gatgcgctac gcttatcagg cctgcataat ctctgcaatc
    12181 tattgaattt gcatgttttt gtaggccgaa taaggcgttc acgccgcatc aggcatgaac
    12241 aaagcgcact atgtcacaat ctgaagcggg ccagctgacc cgctcgtttt ggtgcgtacg
    12301 attacaggaa ctgcaaggag agccagtaca gcccgccgga aagcagtacc gcagccggaa
    12361 gggtaaacac ccaggccatc agaatgctgg tcacggtttt acgctgtaag ccgccaccat
    12421 ctaccaccat cgtccccgcg acagaagagg agagtacgtg agtagtggaa accggcatcc
    12481 cggtataact cgccaggccg atagacactg ccgccgtcat ctgggcagac atcccctgag
    12541 cgtaggtcat gcctttctta ccgattttct caccgatagt cgttgccaca cgacgccagc
    12601 caatcatcgt accgatacct aacgccagcg cgaccgccat gatgatccac accggtgcat
    12661 actcgatggt gctaagcatg tcggacttca gtttcttcaa caggcgctga tcgtcagcac
    12721 tcacgccagg tatcttcact actttgtcga tagtgtcaga aacgcacagc ataatgcggc
    12781 gcatctggct acgttgatca agcgacagct tgtcgtagct ttccacatcg gtagttaaca
    12841 tacctttcag gcggttgagc gcgttaatgg tattcgacgg atggcaatgg aactccgcgg
    12901 gttgcgttgc gccagcttcc ggagccggta ctaactgatc agcaccggta gcctgtttca
    12961 gcagcgcagg atgctgctca aagtaagctt cgacgttgtt gatggcatca cgggtacggg
    13021 tgatttcgta gccagtggca ttcatattca ccacgaagcc tgctggtgcg acaccaatca
    13081 ataccaacat aaccagacca atgcctttct gaccatcgtt cgcgccgtgc gaaaacgcca
    13141 cgccgatagc ggaaaggatc agcgcaatac gcgtccagaa cggcggcttt ttcttgccgt
    13201 ctttcttttc acgctccgct ggggtcaggt ggatacgggc gcgtttcttg gtgccgctcc
    13261 agtagcgacg cagcaagaaa atcagaccgc cagcaaacac caggccgaca ataggggaaa
    13321 caatcagaga accgaaaata cttaatactt tcgggatatt gagtgcatcc accactgacg
    13381 tcccggtcat caacgcattg gttaaaccaa tcccgatgat cgcgccaatc agtgtatgag
    13441 agctggatgc aggtaaacca aagtaccagg tacccaggtt ccagataatc gccgccagca
    13501 acatagagaa caccatggca aggccatgag acgatcccat attaagcagc agatccgtcg
    13561 gcagcatatg cacaatggca taggcaacac tcagaccacc cagcaaaaca cccaaaaagt
    13621 tgaacaccgc cgccataacc acggcgagct gagaacgcat cgcgcgggta tagataacgg
    13681 ttgccacggc gttggctgtg tcatggaaac cattgatggc ttcgtagaac agcacaaaag
    13741 ccagtgcaag caataataac agcccggtat gcaaatccag gccagcaaac aaatgtagca
    13801 taggacgtta cgccattttg aggacatgaa cgcggcgcat tatcagtgac tttcgcggcg
    13861 cgggcaaagt gaaatataga ctttttttga tttgcctcct gtatggattt cactcaaaaa
    13921 ataattatct tatataattc aggcaaatac ttccttttag taatattgat gctggtgtga
    13981 ccactgagga atctttacaa ttcacgctcg ttttttctaa gaggagcgca acgtggaaag
    14041 gtttgatgcc attattatag gcgctggtgc ggcgggtatg ttctgttctg cgctggcagg
    14101 tcaggcagga cgccgggttc tgctgatcga taatggtaaa aaaccagggc gcaaaatcct
    14161 tatgtctggc ggtgggcgct gcaactttac caacctttat gtcgaaccag gcgcttatct
    14221 gagccagaat ccgcattttt gtaagtctgc actcgcgcgt tttacccagt gggatttcat
    14281 tgatctggtc aataaacacg gcatcgcctg gcacgagaaa acgttaggac aactcttctg
    14341 cgatgactcc gcgcagcaga ttgtcgacat gctggtggat gagtgcgaga agggcaatgt
    14401 aaccttcaga ttgcgtagcg aagtgctgag tgtggcgaag gatgaaacag gcttcacgct
    14461 tgaactgaac ggcatgactg tcggttgcga aaagctggtc atcgcgaccg gtgggctgtc
    14521 aatgccgggg ctgggcgcat cgccgtttgg ttataagatt gccgaacaat ttggcctcaa
    14581 cgtgctgccg acccgtgcgg gtctggtgcc attcactctg cataaaccgt tgctcgaaga
    14641 gttacaggtg ctggcgggcg tggcggtgcc ttccgtgatt accgctgaaa acggcaccgt
    14701 tttccgtgag aacttactct tcacccaccg cggcttatct ggaccggcgg tgttgcagat
    14761 ttccagctac tggcaaccgg gtgaatttgt cagtatcaat ctgctaccgg atgtggacct
    14821 cgaaaccttc ctgaatgagc agcgtaacgc acatccgaat cagagcctga aaaacacact
    14881 ggcggttcat ctaccgaagc ggttggttga acgcttacag caactcgggc aaatcccgga
    14941 tgtttcgcta aaacagctca acgtgcgtga ccaacaggca ctgattagca cattgaccga
    15001 ctggcgcgta caacccaacg gcactgaagg ctatcgcact gccgaagtga cgctcggcgg
    15061 cgtggacacc aacgaactct cttcacggac gatggaagcg cgcaaagtgc ctgggctgta
    15121 cttcatcggc gaagtgatgg acgttaccgg ctggctgggg ggctataact tccagtgggc
    15181 gtggtcgagt gcgtgggctt gtgcgcagga tttgattgca gcgaagtcgt cctgacctgt
    15241 tacctaaaga tgaaaattat tagagccgca ttaaaaatga gctaattttg atagtggcta
    15301 tcttgtgatt attttctaat gagcccgtga actgaaaccc tccaggctta atataaggtg
    15361 gaaggaaaga tgattgaaaa ctcacccagt ggccagatct ttataaaata tgaacaggct
    15421 gaaaaagaca gtaactttgt tgttttttat ccttaaccac tatgcattaa tgctgcgtta
    15481 tttcatgatg cctaagaaaa accagcgtta cgcaaatggt caacgctggt tttatccggt
    15541 acgttgcaat tattttttag cagaacctgc ttctaatatt gaaacgattg agaacaacgt
    15601 aaagcatacc gctcccaaac cgaccaaaac ccgcgaagga ataaaatatc ccatgtcggt
    15661 ctgcgccatt tccgcaagaa acgatgccag gaaaaggcaa aacaggcagg tgaagacggg
    15721 aatcatcggt attctgttgg ctaacgaaca ggtacgtctc cataccagtg ccagtagcca
    15781 gacttttgag aatatgctgt aacagatcat tccgaggtaa ataagaataa tgccgggagc
    15841 cagtcgggcg cttgcatcgg aactgactaa gacgtatatc ccctgcagta ccgtgattga
    15901 gccgagaaaa ataacccaat aacaccacag ccagtgttct ttagttgaaa acgtattacg
    15961 tgtttg
//
LOCUS       DADMIB010000095        15959 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.095, whole genome shotgun sequence.
ACCESSION   DADMIB010000095 DADMIB010000000
VERSION     DADMIB010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15959)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15959)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15959
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.095"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            6..1241
                     /locus_tag="JNZ89_002750"
     CDS             6..1241
                     /locus_tag="JNZ89_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY8936569.1"
                     /translation="MSKLPTGVEIRGKYIRIWFMFRGKRCRETLKGWEITNSNIKKAG
                     NLRALIVHEISFGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNT
                     MKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT
                     VDSYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS
                     QNLWKFAVYSGLRHGELAALAWEDVDFEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL
                     LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNEKQKPYYSVS
                     SLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG
                     MWIDDMNDEQIAMLNARLS"
     gene            1293..2228
                     /gene="ttcA"
                     /locus_tag="JNZ89_002751"
     CDS             1293..2228
                     /gene="ttcA"
                     /locus_tag="JNZ89_002751"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HAY8936570.1"
                     /translation="MQENQQITKKEQYSLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
                     CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPVYLEKLGVEYKI
                     VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
                     NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN
                     LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGIPHGSEVVNGGD
                     LAFDREEIPLQPAGWQPEEDENQLDELRLNVVEVK"
     gene            complement(2357..3730)
                     /gene="dbpA"
                     /locus_tag="JNZ89_002752"
     CDS             complement(2357..3730)
                     /gene="dbpA"
                     /locus_tag="JNZ89_002752"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HAY8936571.1"
                     /translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVR
                     VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
                     ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
                     MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAVISGRVQRDPLAIEIDSTDALPPIEQ
                     QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLE
                     QRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTAR
                     AGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVPLEAEMATLCIDGGKK
                     AKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT
                     CRVRLLK"
     gene            complement(4176..5159)
                     /gene="zntB"
                     /locus_tag="JNZ89_002753"
     CDS             complement(4176..5159)
                     /gene="zntB"
                     /locus_tag="JNZ89_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZntB"
                     /protein_id="HAY8936572.1"
                     /translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH
                     LNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPD
                     QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE
                     FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
                     MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV
                     FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL"
     gene            5414..6646
                     /gene="dgcM"
                     /locus_tag="JNZ89_002754"
     CDS             5414..6646
                     /gene="dgcM"
                     /locus_tag="JNZ89_002754"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcM"
                     /protein_id="HAY8936573.1"
                     /translation="MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQ
                     LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEPVI
                     IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA
                     LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQ
                     TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM
                     QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE
                     EFVLLLPRTPLDTALSLAETIRVSVAKVSISGLPRFTVSIGVAHHEGNESIDELFKRV
                     DDALYRAKNDGRNRVLAA"
     gene            complement(6667..7230)
                     /gene="smrA"
                     /locus_tag="JNZ89_002755"
     CDS             complement(6667..7230)
                     /gene="smrA"
                     /locus_tag="JNZ89_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA endonuclease SmrA"
                     /protein_id="HAY8936574.1"
                     /translation="MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQL
                     DNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMV
                     FSFIHQALADGLRNVLIIHGKGREDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGG
                     SGACYVALRKTAQAKQENWERHAKRSR"
     gene            complement(7560..8468)
                     /locus_tag="JNZ89_002756"
     CDS             complement(7560..8468)
                     /locus_tag="JNZ89_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8936575.1"
                     /translation="MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE
                     EGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMG
                     ASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE
                     FTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT
                     PQVGVVCETFSACISLVAKSDFLSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ
                     RRDSRQTPLTPSLITQFRRECGYLQS"
     gene            8644..9944
                     /locus_tag="JNZ89_002757"
                     /pseudo
     CDS             8644..9944
                     /locus_tag="JNZ89_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415854.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallo-hydrolase"
     gene            9944..11389
                     /locus_tag="JNZ89_002758"
     CDS             9944..11389
                     /locus_tag="JNZ89_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HAY8936576.1"
                     /translation="MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLA
                     SALESAGFTVTRNVGYIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTP
                     GENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGV
                     FDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANFPHLGRSALDAVTLMT
                     TGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAK
                     IAEGAALMTETTVECRFDKACSSYLPNRTLENAMYHALSHFGTPEWNSEELAFTKQIQ
                     ATLPPNDRQNSLNNIAATGGENGKAFALRHRETVLANEVAPYAATDNVLAASTDVGDV
                     SWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTLNLFIDSGL
                     LQECQQEHQQVTDTQPYHCPIPKNVTLSSLK"
     gene            11426..12952
                     /gene="abgT"
                     /locus_tag="JNZ89_002759"
                     /pseudo
     CDS             11426..12952
                     /gene="abgT"
                     /locus_tag="JNZ89_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415852.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate transporter"
     gene            12963..13478
                     /gene="ogt"
                     /locus_tag="JNZ89_002760"
     CDS             12963..13478
                     /gene="ogt"
                     /locus_tag="JNZ89_002760"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HAY8936577.1"
                     /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI
                     HYRKEGYERISATNPGGLSDKLSDYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPC
                     GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNGTMTGYAGGVQRKE
                     WLLRHEGYLLL"
     gene            13673..14425
                     /locus_tag="JNZ89_002761"
     CDS             13673..14425
                     /locus_tag="JNZ89_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007849744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HAY8936578.1"
                     /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
                     IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
                     AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
                     LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
                     QKSGMLAVKGKYITIENNDALAQLAGHTRNVA"
     gene            14577..15527
                     /gene="uspE"
                     /locus_tag="JNZ89_002762"
     CDS             14577..15527
                     /gene="uspE"
                     /locus_tag="JNZ89_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspE"
                     /protein_id="HAY8936579.1"
                     /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
                     SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQ
                     EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
                     NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFEPSVYN
                     DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI
                     SAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD"
     gene            complement(15577..15835)
                     /locus_tag="JNZ89_002763"
                     /pseudo
     CDS             complement(15577..15835)
                     /locus_tag="JNZ89_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309940.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2534 family protein"
BASE COUNT         4134 a         3949 c         3914 g         3962 t
ORIGIN      
        1 atgatatgtc taaattacca acaggtgtcg agattcgagg taaatacatt cgcatctggt
       61 tcatgtttcg aggaaaacga tgtcgggaaa cattgaaagg ctgggagatt actaacagta
      121 acattaaaaa ggccgggaat ttaagagcgt tgatagttca tgaaatcagt ttcggtgaat
      181 ttgagtattt aagacgtttt ccccagtcca gcactggggc aaaaatggtg acaacgaggg
      241 tcataaaaac attcggggag ctttgtgata tctggacaaa aattaaagag acagagttaa
      301 caacaaacac aatgaagaaa acgaaatcac aattaaaaac actcaggata ataatttgtg
      361 agagtacccc gatatcgcat attcgttata gcgatatctt aaactaccgg aatgaactgc
      421 tgcatggaga aacgctttac ctagataatc caagatccaa caaaaaagga agaaccgtgc
      481 gcacagttga tagctatatc gccctgctct gttcgttgtt acgttttgcg tatcagtcgg
      541 gatttatatc aaccaaacca tttgaaggag taaaaaaatt acagcgaaac agaataaaac
      601 ctgacccgtt atctaaaaca gaattcaatg cattaatgga aagtgaaaaa ggacagagcc
      661 aaaacttgtg gaaatttgcc gtttactccg ggcttcgtca cggggaactg gcagctctgg
      721 cgtgggagga tgtggatttc gagaagggaa ttgtgaatgt cagaagaaac ctgacgatac
      781 ttgatatgtt cggtccccca aaaacaaatg ccgggatccg gacggtaaca ttactgcagc
      841 cggctcttga agcactgaag gagcaataca aactgaccgg gcatcatcgc aaaagcgaaa
      901 tcacttttta tcatcgggag tacggcagaa ctgaaaagca aaaactgcat tttgttttca
      961 tgcccagggt gtgtaacgaa aaacagaaac cttattactc ggtaagcagt ttgggtgcaa
     1021 gatggaatgc agcagtaaaa cgtgctggta ttcgccgccg taatccgtac catacgcgac
     1081 atacttttgc ctgctggctg ttgacggcag gagcgaaccc ggcatttata gccagccaga
     1141 tggggcatga aactgcgcaa atggtgtatg aaatttacgg tatgtggatt gatgacatga
     1201 acgacgaaca gatagccatg ttgaatgcgc ggttatcgta gttgcaaagt ttgcccccaa
     1261 tttgccccat ttagtaccag agaactgaaa taatgcaaga aaatcaacaa attacaaaga
     1321 aagaacaata cagcctgaac aaattacaaa aacgtctacg tcgtaacgtg ggcgaagcca
     1381 ttgctgactt caatatgatt gaagaaggcg atcgcatcat ggtttgcctc tcagggggta
     1441 aagacagcta taccatgctg gagattctgc gcaatttgca gcaaagcgcg ccaatcaatt
     1501 tttcgctggt ggctgttaac ctcgatcaaa agcaaccggg cttcccagaa cacgttctgc
     1561 ccgtgtatct tgaaaagctg ggcgttgagt acaagattgt cgaagagaac acttacggta
     1621 tcgtgaaaga gaagattcca gagggcaaaa ccacttgctc actgtgttct cgccttcgtc
     1681 gcggtatcct ttatcgtacc gcaacggaac tgggggcgac gaagatcgcg ctgggtcacc
     1741 atcgtgacga tatcctgcag acgttgttct taaatatgtt ctacggcggc aagatgaaag
     1801 gtatgcctcc gaaactgatg agcgatgatg gcaaacatat cgttattcgt ccgctggcct
     1861 actgccgcga gaaagatatt cagcgatttg ccgatgcaaa agcgttcccg attattccgt
     1921 gcaacctgtg cggttcacag cctaacctgc aacgtcaggt gattgctgac atgttgcgtg
     1981 actgggataa acgttatcca gggcgtatcg agacgatgtt cagcgcgatg cagaatgtgg
     2041 tgccgtcgca tctgtgcgat accaacctgt tcgatttcaa aggcatcccc cacggttctg
     2101 aagtggttaa cgggggtgat ctggcgtttg atcgcgaaga gatcccacta caaccggcgg
     2161 gctggcagcc agaagaagat gaaaatcagt tggatgagtt acggctgaat gtggttgaag
     2221 tgaaataacc aggatagcgc ccgatgcgca agcgtatcgg gctactctta tggaggccgg
     2281 ataagacgcg gccaacgtcg catccggcaa tgccgaagaa gatgtttact cttgcacccg
     2341 gcaattcaac atttcattat tttaataacc gcacccggca cgtttttcct ttaatcttcc
     2401 cgccctgtaa ctgtttccat gctttatgag caacagcctg acggaccgcg acatagacat
     2461 gcgccggatg cacggcgatt ttgccaatat ctgcgccatc aagcccgata tctcctgtca
     2521 gtgcacctaa tacatcaccc gggcgcattt tggctttttt cccgccatcg atacacaacg
     2581 ttgccatttc tgcttccagc ggcacaatgg aactattagc tggcggcgtt tgccagttaa
     2641 gttttatctg caacatgtca gaaatgatat tggcccgctg tgcttcttcc ggagcacaga
     2701 aactgatcgc cagaccgcta tttcctgcac gagctgtacg gccgatgcga tgtacatgaa
     2761 cttcagggtc ccacgccagc tcaaagttca ccaccagctc aagcgattta atatccagac
     2821 cacgcgcagc aacatcagtc gcaaccagta cacgggcgct accgttagca aaacgtacca
     2881 gggtctgatc gcgatcgcgt tgctccaaat cgccgtgtaa tgacaatgca ctttgcccta
     2941 cttcattcag cgcgtcgcag acagcctggc aatctttttt ggtattgcaa aacaccacgc
     3001 aagaggatgg ctgatgcaag cttaataacc gttgcaacag aggaattttg cctttgctgg
     3061 atgtctcata aaattgttgt tcaatgggtg gcaaagcatc tgttgagtca atttcaatcg
     3121 ccaaaggatc gcgttgcact cgtccgctga ttacggcgat ggcttccggc caggttgccg
     3181 aaaacagaag cgtctgtcga gatgcaggcg caaaacggat gacatcatca atggcatcgc
     3241 taaatcccat atccagcatg cggtcggcct catccatcac caaagtattc agcgcatcca
     3301 gtgataccgt gcctttttgc aagtgatcca gcaaacgacc cggcgttgcc acgataatat
     3361 gcggcgcatg ttgcaacgaa tcacgctgca taccgaacgg ttgaccaccg cacaacgtca
     3421 aaattttggt atttggcaga aaacgcgcca gccgacgcaa ttcacctgcc acctgatccg
     3481 ccagttcacg cgtaggacac agcactaaag cctgggtttg aaatagcgac gcatcaattt
     3541 gctgtaacaa gccgaggcca aaagccgccg ttttgccgct gccggttttc gcctgcacgc
     3601 gaacatcttt tccggcaagg atcgccggaa gcgcggcggc ctgcaccggc gtcatagtta
     3661 aataacccaa ctcattaagg ttcgtgagtt gggcgggagg caaaacattc agggtagaaa
     3721 aagcggtcac aatctattct cgtggtcatc gacgcaaagt tagcaggcgc gtatcctcgc
     3781 agatctacgc gggtggtggg tcaggcatgg gttgcgggcg agggatcgga tcgggcactg
     3841 gaacaggatc gccaggaatc ggttcaggga caggaatttg caaataaata agtgtcgtca
     3901 tatttccctc cggtcattgg gtggactctt aaagggtaga cgctgataaa taacaggcaa
     3961 aaaaaagccg actcatcaaa gtcggcgtcg tacgaatcaa ttgtgctatg cagtaattca
     4021 aaaaaggaag taagacaata tggagcgcaa cgcccatcgc ttgacgttgc attcacctgc
     4081 aagggagata ttgccctgaa tgggtagaga gtttattgac ttcgctcaaa ctttgcggcg
     4141 tttttgtata cagacagccg gaaaaattgc ttttgttaca accatttact acgatgcaac
     4201 cataaagcaa caccaccaat aagaacaact aacagaatac aaaaaattga aaatccgaat
     4261 tgccacccgc cgccagggat cccaccaagg ttgacgccaa ataaccctgt cagaaaggta
     4321 ctgggtaaaa agaccattgc catcaatgac attgtatagg tacgacgagc taaattttcc
     4381 tgcatcacct gagcgatttc atccgccatc acgccagtcc gtgctataca ggcgtcgatt
     4441 tcgtcaagac cgcgcccaag gcgatcggca atatcctgca tccgacggcg ttggtcatcg
     4501 ctcatccacg gcaaacgttc actggcaaga cgagcataaa catcacgttg cggtgccata
     4561 tagcgacgca tcacgattaa ttgtttgcgc agcagagcca ggaatccacg cggtggaatt
     4621 tgctgatcaa ggagattatc ttcaaggtcg ataattttat cgtgcagctg ctcgataaat
     4681 tcgctggaat gatcggtcaa cgcatcgcac acatccacca gccaccctcc gcaatcggtc
     4741 ggacccgtgc cctcttccag atcgctcacc acatcgtcca gcgccagcac tttgcgttgt
     4801 cgggtcgaaa caattaaccg cccgtccata tatacacgca tggcgaccag ttgatcgggg
     4861 cgttcatcgg tgctgccgtt tatacagcgc aatgtaatca gcgtgccttc accgagacgg
     4921 ctgactcggg gccgtgtgct ctcgcctgcc agcgcatcac gtacgttatt gggaagcagc
     4981 ggtgttgtcg ccagccattg ggcgctatca tggtgtacat aattaaggtg gagccagcag
     5041 ggatgcgctt catcaatcac atctgtattt tccagcggtt taacgccgcc tctaccatcc
     5101 agcatccagg caaatactgc atccgggaca ttaacgtccg atcccttaat cgcttccaca
     5161 gtgcctccat catcaacgca ttattttgta gtctagcctt ctggccctgt tacgcaacat
     5221 ctcatcaccc cattaccctg aaatgattaa taaaattctg tctaaattga atacaaaaag
     5281 caaaatgctt ttccgtatac aaaccgtgtg aagtgttaaa tagcgtctat cattatcaga
     5341 attatctgat catatgacgt ggcttttttg cgatcggata gcaacaaaaa ttgataaaaa
     5401 taacgggatc tcaatgatta cgcacaactt caataccctg gacttactca ccagtcctgt
     5461 ctggattgtt tcgccctttg aggaacagtt aatttatgcc aatagcgcgg cgcgactgtt
     5521 gatgcaagac ctcacgttta gtcagctacg aaccggaccc tattccgtct cctcacaaaa
     5581 agaactgccg aaatacctct ccgatctgca aaaccaacac gatattatcg aaatcctcac
     5641 tgttcagcgt aaagaagagg aaacagcatt aagctgtcgg cttgttttgc gagagctgac
     5701 agaaacagaa ccggtgatta ttttcgaagg tatcgaagcg ccggcaacgc tgggtttaaa
     5761 agccagtcgc tcggcaaatt atcagcgcaa aaaacaaggt ttttatgcgc gcttttttct
     5821 gactaactct gcaccaatgt tgttgattga cccctcacga gatggccaaa tcgtcgatgc
     5881 taacctcgcc gcgctcaatt tctacggtta taaccatgaa acgatgtgcc agaaacatac
     5941 ctgggaaatt aatatgctcg ggcgtcgcgt catgcctatc atgcatgaaa tttcgcattt
     6001 acccggcggt cataaacctt tgaattttgt tcataaactg gcggatggat ctactcgtca
     6061 tgtgcagacc tatgccgggc cgattgaaat ttatggcgac aagctcatgt tatgtattgt
     6121 gcatgatatt actgagcaaa aacggctgga ggagcagctg gaacatgctg ctcaccatga
     6181 cgcgatgacc ggattactga atcggcgaca gttttatcac attacggaac caggccaaat
     6241 gcagcacctc gccatcgccc aggattacag cttgttgctc atcgacaccg atcgttttaa
     6301 acacattaac gatctctatg ggcattctaa aggtgatgag gtgttatgcg ccctcgcccg
     6361 caccctcgaa agttgcgctc gcaaaggcga tttggtgttt cgttggggag gcgaagagtt
     6421 tgtcttattg ctaccaagaa ccccactgga taccgcgctt tcgctggctg aaactatccg
     6481 tgtaagcgtg gccaaagtga gtatttcggg cttaccacgt tttaccgtca gcattggtgt
     6541 ggcgcatcac gaaggaaatg aaagcatcga tgaactgttt aaacgcgttg atgatgcttt
     6601 gtatcgggcg aaaaatgatg gacgcaaccg cgtgctggcg gcataagccg cggatgcgtc
     6661 tcgagatcaa cggctgcgct tagcgtggcg ctcccagttt tcttgcttcg cctgcgccgt
     6721 tttacgtagt gcgacgtaac acgccccgct gccgccatga tgcggtagcg cggtgcaata
     6781 tgcctgaaca tcatcaaatt cggtcagcca gcgcgccaca tagctgcgga caatattggc
     6841 atgcgattta tcttcccgcc ctttaccatg aataatcagc acattacgca aaccatccgc
     6901 cagggcttgg tgaatgaaac tgaacaccat tttgcggcac tcttccaccg gctggcgcaa
     6961 aagattcagg ctcgcctgtt gcggatattt accactgcgc agcttatcca gcaccccatg
     7021 ttgcaaccct tcccgccgaa actccagcgg ctgacttagc gggatgatgt cgagaaatcc
     7081 ggtggtgagg aaattatcaa gctgcagcgt gtcgatacgc tgcggcgcac gttggttacg
     7141 cgttggatgc cagtggacat ctgtagcacg tttcagcggc tggacatctt ccatggcgtc
     7201 aagaaacagc gatttgtcgt caaggttcat gttacatcct cccgcaatta agagcgcgat
     7261 atgataacca gaccgggtcg gtccaacaac gtattaccaa aaattccagt aataagttcc
     7321 aaatattgcc gatattttaa gcaaaatgct tatgcatgat tattcattca cgatattaat
     7381 aatgtaactt atattttcgt gaaatctgtc actgaagaaa attggcaact aaaggttaaa
     7441 accgttataa cacagtcacc ggcgcagagg agacaatgcc ggacttaaga cgcggatgca
     7501 ctgctgtgtg tactgtagag tctggcggat gtcgacagac tctatttttt tatgcagttt
     7561 taactttgca gatagccgca ttctcgccgg aattgcgtga ttaatgacgg ggtcagtggt
     7621 gtctggcgac tatcacgccg ctgaatcaaa taataggccg ctttcggtaa aatttcgcta
     7681 accggcaaca tcaccagccc ctgtccgtgc aagggatcgc agcccatttc ttcaggcagt
     7741 atgctgagaa aatcgctttt tgccaccaga ctgatacagg ctgagaacgt ctcgcagact
     7801 acaccgacct gtggcgtttg cgcctgatcg tcaagcaatt cactcaactg tttgtagtaa
     7861 ctgccgtgtg gcgtcggcat tgtccagctg taatccagta actgtttgat cgaacgggca
     7921 ccaatggcgg ggtgtcccgg gcggcaaaag atcgcgaatt gcttttccag taatttctca
     7981 aaagtaaatt cgtggtcgta cggtccctga taataggtat tgatggtgaa atccaattct
     8041 ccctgacgca attcattaat catcgacacc agttgccctt ccataatgcg tacttttacc
     8101 tgcggatgct gctgatgaaa acgagatatg acagctggca tcagactgcg ggaaatactg
     8161 gcccccatgc cgatattaat ctgccctgcc agttgccctt gtcgttggcg aatatcctct
     8221 tgggctgcgc gcagctcttc aagaataaga ctggcgtgct gataaaaact ttcaccggca
     8281 tcagttaacg tcacgccttt actacggcga aaaaagagtt gcgccgctaa tccttcttcc
     8341 aactcctgaa tagatttact cagtgccggt tgcgacatat tcaacattcg gctcgctccg
     8401 cgaatgctgc cctgacgagc cacttcaaca aaagcacgaa tttgatgaat ttttacctga
     8461 aaagccatga cgccaccgat aaccgttatt tatcagacca aagaaactgg catctacttt
     8521 aatgcagatg attgtgtcag ggtaatttat gaacggttaa aactgtgaaa aatcagttag
     8581 tgataagtaa aaactatcgc tacgtgaacc gggtcacact ttttactgat gacgggaaag
     8641 gttatggagt ctttgaatca atttgttaat tcgcttgccc caaaattatc gcactggcga
     8701 cgtgattttc atcactatgc agagtctggc tgggtggaat tccgcactgc cacccttgtt
     8761 gcggaagaat tgcagcagct cggctattca ctggcgctgg gccgcgaagt agttaatgaa
     8821 agtagccgga tgggactacc tgatgaactc actctacaac gcgaattcga gcgcgctcgt
     8881 caacagggtg cgctagcaca atggattgcg gtttttgaag gtggtttcac tggtatcgtc
     8941 gccaccctgg ataccggtcg ccccggtccg gtgatggctt tccgtgtcga tatggacgcg
     9001 ctggatctca gtgaagagca ggatgtcagc catcgcccct accgcgacgg ttttgcgtca
     9061 tgtaacgccg gaatgatgca tgcctgtggt catgatggac ataccgccat tgggcttggg
     9121 ctagcgcata cccttaaaca attcgagtcc ggactacatg gcgtcatcaa actgattttt
     9181 cagcctgcag aggaaggtac gcgtggcgcg cgggcgatgg tcgatgcagg tgtcgtagat
     9241 gatgttgatt attttactgc cgtgcacatt ggcactggcg tacctgcggg caccgtggtg
     9301 tgcggcagtg ataattttat ggcaaccacc aaatttgacg cgcacttcac cggtaccgcc
     9361 gctcacgcag gcgcaaaacc agaagacggt cacaatgcct tgttggcggc agcacaagcc
     9421 actcttgcac tgcatgcaat cgccccggag cttccagagt aaacgtgggc gttatgcagg
     9481 caggaagcgg tcgtaacgtt gttcctgcct cggcgttgct gaaagtggaa acacgcgggg
     9541 ccagcgacgt cattaatcaa tatgtttttg accgtgcaca acaagcgatt cagggcgcag
     9601 caaccatgta tggtgtcggc gttgaaactc gtctgatggg tgcagctacc gccagttctc
     9661 cttcgccgca atgggtcgca tggttgcaaa gtcaggcggc tcaggtcgcg gggggcaatc
     9721 aggccattga acgtgttgaa gcgcctgcgg gttccgaaga tgccacatta atgatggccc
     9781 gcgtgcagca acatcaaggg caagcctcct acgtggtgtt tggcacacag ctggcggcag
     9841 gtcatcacaa cgaaaaattc gattttgacg agcaggttct cgctattgcc gtcgaaacgc
     9901 tggcgcgcac cgcgctcaat tttccctgga cgcgaggtat ctgatgcagg aaatctatcg
     9961 ttttatcgac gatgcgattg aagccgatcg ccaacgttat accgatattg ccgatcaaat
    10021 ctgggatcat ccagaaacac gttttgaaga gttctggtca gcggagcatc tggcttcggc
    10081 gctggaatct gcaggcttca ccgttacccg caacgtaggc tatatcccaa atgcctttat
    10141 tgcttcgttt ggtcaaggca aaccggttat cgccctgctg ggagaatatg acgccctggc
    10201 aggtttaagt cagcaagcag gttgcgcgca acctacatcc gtgacgcccg gtgaaaatgg
    10261 tcacggttgc ggacacaatt tgctgggaac cgccgccttt gccgctgcaa tagccgtcaa
    10321 gaaatggctg gaacaatatg ggcaaggcgg cacggtgcgc ttttatggtt gtcctggcga
    10381 agaaggcggc tcgggtaaaa cgttcatggt tcgcgagggg gtatttgatg atgtggatgc
    10441 ggcactcact tggcacccgg aagcctttgc cggtatgttc aatacccgca cgctggcaaa
    10501 cattcaggca tcatggcgct ttaaagggat cgcagcacat gccgcgaatt tccctcattt
    10561 gggacgcagc gcccttgatg ccgtaacgtt gatgaccact ggcaccaact tcctcaacga
    10621 acatattatt gaaaaagcgc gcgtacacta tgccatcaca aatagcggcg ggatctcgcc
    10681 caacgtggtc caggcgcagg cagaagtgct ttatcttatc cgcgcccccg aaatgaccga
    10741 cgtgcagcat atttatgatc gggtcgccaa aatcgccgaa ggtgcggcat tgatgaccga
    10801 aaccacggtt gaatgccgct tcgacaaagc ctgttccagt tatctcccga atcgcacctt
    10861 agaaaatgcc atgtaccatg ccctatccca ttttggtacc ccggaatgga actccgaaga
    10921 actggctttt acgaaacaaa ttcaggctac gctccccccc aacgatcggc aaaacagtct
    10981 gaataatatc gccgcaaccg gtggcgaaaa cggcaaggct tttgcactac gtcatcgtga
    11041 aacggtactg gcgaatgagg tcgctccata tgccgccacc gataacgtgc ttgcggcatc
    11101 gactgatgtc ggcgacgtca gttggaaact gcctgttgcc cagtgtttca gcccctgttt
    11161 tgccgtcggt acaccgctac atacgtggca actggttagc caggggcgaa catctattgc
    11221 tcataaagga atgctgctgg cggcgaaaac tatggcagca accacactca atctcttcat
    11281 tgattcaggg ctattgcaag aatgccaaca agagcatcag caagttacgg acacgcaacc
    11341 gtatcactgc cctatcccaa aaaacgtgac actgtcatct ttaaaataac aacaacaacg
    11401 caaacacaac aaccgaggaa tgcccatgag tatgtcatcc ataccgtcgt cctcctaatc
    11461 cgggaagctc tatggctggg tcgaaagaat tggtaacaag gttccccatc cttttttgct
    11521 ctttatctat ttgattatcg tactcatggt gacgacggca attttgtcgg cctttggcgt
    11581 cagtgcgaaa aacccgaccg atggaacgcc ggtggtggtg aaaaacctgc tcagtgtgga
    11641 aggattacac tggtttttac ccaatgttat taaaaacttt agcggttttg ctccacttgg
    11701 tgcgatcctg gcgctggttt taggtgccgg tctggcggag cgcgtcggct tactgccagc
    11761 gctaatggtt aaaatggcat cgcatgttaa tgtccgctac gccagttata tggtgctgtt
    11821 tattgctttt ttcagccaca tttcttccga tgcggcgtta gtgatcatgc caccgatggg
    11881 tgcgctgatt tttctggcgg tgggcaggca tccagttgca ggtttactgg ctgccattgc
    11941 aggcgtaggt tacggcttta cggctaattt actgattgtc acaaccgacg tgttgctgtc
    12001 ggggatccgc acggaagcgg cggctgcgtt caatccgcaa atgcacgtca gtgtaattga
    12061 taactggtat tttatggcca gctccgtagt cgtactgacg attgttggcg gcctgataac
    12121 cgacaaaatc atcgagccac ggttaggtca atggcaggga aacagcgatg agaaactgca
    12181 gacattgacc gaaagtcagc gttttggttt acgcatagca ggtgtcgtat cgctactttt
    12241 tattgctgcg atcgcgctga tggtgatccc ggaaaacggg atattgcgcg atccgattaa
    12301 tcacaccgtg atgccatcac cctttattaa aggtatcgtg ccactaatca ttcttttttt
    12361 ctttgtggtt tcgctggctt atggcatcgc tacccgcaca attcgacatc aggcggattt
    12421 accgcattta atgattgaac cgatgaaaga gatggcggga tttatcgtga tggtttttcc
    12481 cctcgcccag tttgtcgcca tgtttaactg gagcaacatg gggaaattca tcgccgtggg
    12541 gctgaccgat atactggaaa gttcagggct tagcggcatc ccggcgtttg tcggtctggc
    12601 gttgctttcc tctttcttat gcatgtttat tgccagtggt tccgcaatct ggtcgattct
    12661 ggcccccatt ttcgtaccaa tgtttatgct acttggcttt cacccggcat ttgcgcaaat
    12721 cctctttcgt attgccgact catccgtatt gcctttagcg ccggtatctc cttttgttcc
    12781 actgtttctt ggattcctgc aacgctacaa accagacgcg aaactgggta cttactattc
    12841 gttagtcttg ccctatccgc ttatcttttt ggtggtatgg ctgctgatgt tgctggcgtg
    12901 gtatcttgtt ggtctgccga taggtccggg gatttaccca cgtttgtctt aagagagaac
    12961 ggatgctgag attacttgaa gaaaaaattg ccacgccact gggtccactg tgggtgattt
    13021 gcgatgagca atttcgcctg cgggcggttg aatgggaaga gtacagcgaa cgcatggtgc
    13081 agctgctgga catccattat cgcaaagaag gctatgagcg catttctgcc accaacccag
    13141 gcggtttaag cgacaagctt agtgattatt ttgccggtaa tcttagcatt attgatacgc
    13201 ttcccactgc cacagggggg acgccatttc agcgcgaagt ctggaaaact ctacgcacta
    13261 tcccctgcgg gcaggtaatg cattacggcc aactggctga acaattgggc cgccctggcg
    13321 cggcgcgtgc cgttggtgcg gcaaacggat cgaatcccat cagcatcgtc gtaccttgcc
    13381 atcgggttat tggccgaaac ggcaccatga ccggatatgc aggcggagtt cagcgaaaag
    13441 agtggttatt gcgccacgaa ggttatcttt tgctgtaaac attaaacaat ttgtgccagc
    13501 ttgttcacac ttttatgtaa agttaccctt aacaacttaa tggttttcaa atagatagac
    13561 atatatttac atctaatatc ggaattctct gctgttaagg tttgcttaga cttacttgct
    13621 ccctaaaaag atgttaaaat tgacaaatat caattacggc ttgagcagac ctatgatccc
    13681 ggaaaagcga attatacggc gcattcagtc tggcggttgt gctatccatt gccaggattg
    13741 cagcatcagc cagctttgca tcccgttcac actcaacgaa catgagcttg atcagcttga
    13801 taatatcatt gagcggaaga agcctattca gaaaggccag acgctgttta aggctggtga
    13861 tgaacttaaa tcgctttatg ccatccgctc cggtacgatt aaaagttata ccatcactga
    13921 gcaaggcgac gagcaaatca ctggtttcca tttagctggc gacctggtgg gatttgacgc
    13981 catcggcagc ggccatcacc cgagcttcgc tcaggcgctg gaaacctcga tggtatgtga
    14041 aatcccgttc gaaacgctgg acgatttgtc cggtaaaatg ccgaatctgc gtcagcagat
    14101 gatgcgtctg atgagcggtg aaatcaaagg cgatcaggac atgatcctgc tgttgtcgaa
    14161 gaaaaatgcc gaggaacgtc tggctgcatt catctacaac ctgtcccgtc gttttgccca
    14221 acgcggcttc tcccctcgtg aattccgcct gacgatgact cgtggcgata tcggtaacta
    14281 tctgggcctg acggtagaaa ccatcagccg tctgctaggt cgcttccaga aaagcggtat
    14341 gctggcagtc aaaggtaaat acatcaccat cgaaaataac gatgcgctgg cccagcttgc
    14401 tggtcatacg cgtaatgttg cctgattttt ccgcataact cactatcctt ctgtcatatc
    14461 attaaatttt tctgatttat tgatctggca gaaggttcat cactgtttca ttcaccagat
    14521 atgggttaat cttttaatta caaactgcgt tgacagttgt tgtaaggaga ccctgtatgg
    14581 ctatgtatca gaacatgctc gttgttatcg atcctaacca ggacgaccaa ccagcattgc
    14641 ggcgagctgt ttatttacat caacggattg gtggcaaaat taaagccttt ttgccgatct
    14701 atgacttctc atacgaaatg accaccctgc tctccccgga cgaacgtacc gctatgcgtc
    14761 agggcgtcat cagccagcgt acagcctgga tccacgagca ggcaaaatat tatctcaatg
    14821 ctggcgttcc cattgaaatt aaagtggtct ggcataaccg tcctttcgaa gccatcattc
    14881 aggaagtgat cagcggcggg cacgatttgg tgctaaaaat ggcgcaccaa catgaccgtc
    14941 tggaagcggt gatttttacg ccaacggact ggcatctgtt acgcaaatgc ccaagcccgg
    15001 tgtggatggt gaaagaccag ccgtggccgg aaggaggtaa ggcgctggtg gcggtgaatc
    15061 tcgccagtga agagccgtat cataatgcgc tcaatgaaaa actggtcaaa gagacgatcg
    15121 aactggcaga acaagtcaac cataccgaag ttcatctggt tggcgcttac ccagtaacgc
    15181 caattaatat cgcgattgaa ctgccggaat ttgagccgag cgtttataac gatgccattc
    15241 gtgggcaaca tttgctggca atgaaagccc tgcggcagaa attcggcatt aatgaaaaca
    15301 tgacgcacgt agaaaaaggt ctgcccgaag aggttattcc tgatttggcg gagcacttac
    15361 aggcggggat tgtggttctg ggcacggtag gacgcaccgg tatttcagca gcattcctcg
    15421 gcaacacggc ggaacaggtg attgatcatc ttcgctgcga tctgttggtc attaaacctg
    15481 accagtatca gacacccgtt gaactggatg acgaagaaga cgattaacga ctcttcaata
    15541 actgacaagg cccgagttat cgggcctatt ttttacttac tgctcttcgc cgccaaggaa
    15601 ataaattccc aacgggattg ccagcaacac agtaaagacc aggctataaa caaaaatcat
    15661 cgatgactga atcacataca ttgatgtcgt ccactcagac agcggaatat tgtactgttc
    15721 tataacgccg ccgatagtcg cgcgagtcac aaccgacgcc gcaataatga caaaccgcca
    15781 acaaaccaaa gagaaatttc ttccctttcg ctgacttcag tttcgccata atcatgatgt
    15841 aatccttgtg cagacaaatt tcttgttacc taaacgtaac aataccatga catttcaccg
    15901 ttgtctgctc tgaaaacctc acctcttagc tggatttaca atcaacgcat tgattagtt
//
LOCUS       DADMIB010000096        15640 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.096, whole genome shotgun sequence.
ACCESSION   DADMIB010000096 DADMIB010000000
VERSION     DADMIB010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15640
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.096"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            337..429
                     /locus_tag="JNZ89_002764"
                     /pseudo
     CDS             337..429
                     /locus_tag="JNZ89_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004120448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            433..612
                     /locus_tag="JNZ89_002765"
                     /pseudo
     CDS             433..612
                     /locus_tag="JNZ89_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310134.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimH domain protein"
     gene            946..3225
                     /gene="ydeP"
                     /locus_tag="JNZ89_002766"
     CDS             946..3225
                     /gene="ydeP"
                     /locus_tag="JNZ89_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance putative oxidoreductase YdeP"
                     /protein_id="HAY8936580.1"
                     /translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKP
                     EGFDCPGCAWPDPKHTASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHE
                     LEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
                     FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHN
                     PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY
                     NVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW
                     KDIEHISGLSQTQIAELADAYAAADRTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI
                     GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQA
                     ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP
                     VLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQS
                     VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF
                     ITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK
                     ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD
                     PLSGIPGYKSIPVELEPSN"
     gene            3473..3670
                     /gene="safA"
                     /locus_tag="JNZ89_002767"
     CDS             3473..3670
                     /gene="safA"
                     /locus_tag="JNZ89_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system connector SafA"
                     /protein_id="HAY8936581.1"
                     /translation="MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLG
                     ISEMGRIARDLTHFIINSLQD"
     gene            3745..4506
                     /gene="ydeO"
                     /locus_tag="JNZ89_002768"
     CDS             3745..4506
                     /gene="ydeO"
                     /locus_tag="JNZ89_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response transcriptional regulator
                     YdeO"
                     /protein_id="HAY8936582.1"
                     /translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY
                     ERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERN
                     HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCL
                     YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA
                     FRKHFGNSPKRVSKEYRCQSHTGMNTGNTMSALAI"
     gene            4908..6590
                     /locus_tag="JNZ89_002769"
     CDS             4908..6590
                     /locus_tag="JNZ89_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HAY8936583.1"
                     /translation="MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAF
                     SDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAI
                     EAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGI
                     PLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQ
                     NRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPF
                     MLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQ
                     YDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKL
                     ISAMDFYPTALDAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEE
                     NIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYNLTD
                     LQQKDNLAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK"
     gene            6642..7799
                     /locus_tag="JNZ89_002770"
     CDS             6642..7799
                     /locus_tag="JNZ89_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HAY8936584.1"
                     /translation="MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIK
                     QYIAASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEW
                     CSFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVI
                     NNVNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAY
                     GKFMSTIFMQWVKNDVGEIFIRQFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIY
                     ECDHFVYPQYKIGNINKSELKTMNSVQLTAQKKRISAKCQQCAYKPICNGGCPKHRIT
                     KVNNETVSYFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN"
     gene            complement(7765..7887)
                     /locus_tag="JNZ89_002771"
     CDS             complement(7765..7887)
                     /locus_tag="JNZ89_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936585.1"
                     /translation="MTKHPTGIYVGCLVKVIRRRLRMELKESVINYSPFVLQHP"
     gene            8102..9787
                     /locus_tag="JNZ89_002772"
     CDS             8102..9787
                     /locus_tag="JNZ89_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HAY8936586.1"
                     /translation="MITIPITFCMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILG
                     VVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIR
                     WREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
                     SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRP
                     LNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELRDNFHTIKENWHRLMNRQR
                     WLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDE
                     LAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVANASIRTPDNKIILENLNFHVSP
                     GKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDIFSPADSWYVSQTPLIKTGLLKEIICK
                     ALPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWI
                     FLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISAVL"
     gene            9825..12197
                     /locus_tag="JNZ89_002773"
     CDS             9825..12197
                     /locus_tag="JNZ89_002773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY8936587.1"
                     /translation="MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVN
                     GNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPY
                     QNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG
                     RFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYFSPD
                     FKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVVGRAQYKNVIDTALS
                     KFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLR
                     TTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQ
                     KFAVGDVSHQPYSGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGSLGIDN
                     YTLYMADHISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFADQTSMITAGYNRY
                     YGGNILDMGLRDIRNSWTESVSGNKTLTRYQNLKTPYNDELAMGLQQKIGKNVIARAN
                     YVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFNLSFELAEPLHIRQVDINPQ
                     IVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFT
                     HQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSW
                     TPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF"
     gene            12242..15037
                     /locus_tag="JNZ89_002774"
     CDS             12242..15037
                     /locus_tag="JNZ89_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HAY8936588.1"
                     /translation="MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGL
                     RYMIYPHAQPKDQVNLWLQIHTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETF
                     ESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAE
                     RGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQR
                     WYQPNNMTFIVVGDIDSKKALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDK
                     ENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTA
                     RSVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWL
                     KNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQL
                     RKNQDAFWEQMVNNELAAKKALSPAAILALEKEYANKKLAAYIFPGRNLSLTVDADPQ
                     AEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQITAVSNKGDLSFPAQQKSLIA
                     LANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLIN
                     QRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIV
                     QFTAADALAADRQLFSSPADITFVIVGNVSEDKLVALITRYLGSIKHSDSPLAAGKPL
                     TRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLATRMALDAFNVALAKDLRVNIRE
                     QASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQEL
                     NEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVK
                     QYLSHPVNTYTGVLLPK"
     gene            15399..>15640
                     /locus_tag="JNZ89_002775"
     CDS             15399..>15640
                     /locus_tag="JNZ89_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY8936589.1"
                     /translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
BASE COUNT         4555 a         3400 c         3426 g         4259 t
ORIGIN      
        1 tggtgacggc agttgaaacc aatgtgttga ggttgcatgg acggttaagc cgagaatacg
       61 gtagtaagtg agatatgggg tttggtcgtt gttaatgagc aaccatgacc atgaccgcca
      121 acgactggat tctcccttgg tttatgttgg tgcgcataat gtatattatg ttaaatcata
      181 tctgagtgat gcgaagtgct tttctggtag tcgttattcg ttcagggttc cagaacttaa
      241 gcctctcctc tttcataatt ggcctgtgca tgacggatat aggctggctg gtatgcagat
      301 ttgccgtttg ccgcatcttc ccagcgttga agactcaagc tggcaaaccg cgtgcaaatg
      361 agcacgccct ctttccatca acacttcagg cagcttgcgg gaatgagtcc actacggtat
      421 cagaaatggg aagtgggtgt ctctctgatg cgtaatggaa aaatactggc tacgggagaa
      481 aatgtctccc tggggacagt aaataaaagc aaagtatctc tgggtttaag cgcaacctat
      541 ggacaaacag gaaacaaggt tgcagccgga accgtccagt cagtcattgg tgtcactttt
      601 atctatgaat aattgtgatt ttgatcttag tctatgcgct ccattcacga aaattgcgcg
      661 gataattatt ttgtgaaggc tattatccta cacctgtaag aaaatccgcg cacaattgaa
      721 gccagagtct tattttttat attgaaaaat atgttaattt aaacactatg agagatgatg
      781 cttaacttat cgtatttaat ctattgttta acgataatag attaaaaata gaaagagagt
      841 agtcccctac tcttatatat ccatgttggc gataatccct ttgtatgtac tgtgcatcat
      901 cgctattaca aatcctaata attcatttcc acacaggata agtagatgaa gaaaaaaatt
      961 gaatcctacc agggtgctgc aggtggttgg ggtgctgtta aatccgtagc gaatgcagta
     1021 cgtaagcaga tggatatacg ccaggatgtt attgccatgt ttgacatgaa taagccagag
     1081 ggctttgact gtccgggttg tgcatggcca gatcctaagc acactgcgtc attcgacatt
     1141 tgtgaaaacg gcgcaaaagc aatcgcctgg gaagtcacgg ataagcaggt aaatgcctct
     1201 ttctttgctg agaatacggt tcaatcatta cttacctggg gagatcacga gcttgaggct
     1261 gcgggacgtc tcactcagcc tttgaaatat gatgccgtca gcgactgtta caagccatta
     1321 agctggcaac aagctttcga cgaaattggc gcacgccttc aaagctatag tgatcccaat
     1381 caggttgaat tctatacttc gggccgcact tccaatgaag ctgcctttct ttatcagctt
     1441 tttgcccgtg aatacgggag caataacttt cccgactgct ccaacatgtg ccatgaaccg
     1501 accagtgtgg gtttggcagc gagtatcggc gtgggtaaag ggactgtgtt gctggaagac
     1561 tttgagaagt gcgatttagt catttgcatt gggcataacc ctggtacaaa ccacccccgc
     1621 atgctgactt cgttgcgcgc tttagtgaaa cggggagcga aaatgatcgc catcaatcct
     1681 ttacaggaac gtggcctgga gcgatttacc gcaccgcaaa acccgtttga aatgctgacg
     1741 aactctgaga ctcagttggc cagtgcgtac tacaacgtgc gcattggtgg cgatatggcg
     1801 ttgctcaagg ggatgatgcg cctgttaatt gagcgcgatg atgctgcaag tgccgcaggt
     1861 cggccctcat tgcttgatga cgaatttatt caaacgcata ccgtcggctt tgacgagcta
     1921 cgccgtgacg ttctcaattc cgagtggaaa gatatcgaac atatttctgg actaagtcag
     1981 acacaaatcg ccgaactggc tgacgcatat gccgctgccg atcgcaccat tatctgttac
     2041 ggaatgggga tcactcagca cgaacatggt acccagaatg tacagcaact ggtcaatctg
     2101 ctgttgatga aaggtaacat tggcaagcct ggtgcgggta tctgcccact acgaggtcac
     2161 tctaatgtac agggcgaccg aaccgtcggt atcaccgaga aaccgtctgc agagtttctg
     2221 gctcgcctgg gtgagcgcta tggcttcacc ccacctcatg cacctggaca tgctgcaatt
     2281 gccagcatgc aagcaatatg cacggggcag gctcgagcat tgatctgcat ggggggcaac
     2341 tttgcactgg caatgccaga tcgggaagcg agcgctgtac cgttaacgca attagatttg
     2401 gcggtacacg tagccactaa gcttaaccgc tctcatctgc tgaccgcacg gcatagctat
     2461 attctgccgg ttctggggcg tagcgagatt gacatgcaaa aaagcggtgc gcaggcggta
     2521 accgttgagg attcaatgtc gatgattcat gcctcgcgtg gcgtgttaaa acccgccggt
     2581 gtaatgctga aatcagagtg tgcagtggtc gcgggaatcg cgcaggcagc actaccccag
     2641 agcgtggtag cctgggagta tctggtggaa gattatgatc gcattcgcaa tgacattgaa
     2701 gctgtgttac cagagttcgc cgactataac cagcgcatcc gacatcctgg aggttttcac
     2761 ctgataaatg cagctgctga aaggcgctgg atgacgccgt caggtaaggc taatttcatt
     2821 accagcaaag ggctgttaga agatccctct tcagcgttta acagtaagct ggtcatggcg
     2881 acagtacgca gccacgatca gtacaacacg acgatttatg gtatggatga tcgctatcga
     2941 ggggtattcg gtcaacgaga tgtggtcttt atgagtgcta aacaagctaa aatttgccgt
     3001 gtaaaaaacg gcgaaagagt taatcttatt gcgcttacgc cagacggtaa gcgcagctca
     3061 cgccgcatgg atagattaaa agtggtcatt taccctatgg ctgaccgctc actggtgacc
     3121 tattttccag aatcgaatca catgctaact cttgataacc acgatccatt aagtggcatt
     3181 cctggttata aaagtattcc ggttgaatta gaaccatcaa attaattcgc ctcctcattt
     3241 cttctgctgt catccgcaca gcagaagaat ttctcattga ctattatcgc gcaatttgct
     3301 cacattgatc aaattaaacc acacactata agatataaac ctctgcctac agctgtaaga
     3361 aactccgctc agtactgaag tgccagtcct atttcctctt ttctccagcc tgttatatta
     3421 agcatactga ttaacaattt ttaacgttat ccgctaaata aacatatttg aaatgcatgc
     3481 gaccacagtg aaaaacaaaa tcacgcaaag agacaactat aaagaaatca tgtctgtaat
     3541 tgtggttgtc ttattactga cccttacgtt gatagccatt ttttcggcaa ttgatcagct
     3601 gggtatttca gaaatgggtc gcattgcaag agatcttaca catttcatta tcaatagttt
     3661 gcaagactga aaataaacag caaattataa atatgaaatg ttaaaaaagt atcgataaaa
     3721 actttattgt tttaaggaga taaaatgtcg ctcgtttgtt ctgttatatt tattcatcat
     3781 gccttcaacg ctaacatttt agataaagat tacgccttct ctgacggcga gatcctgatg
     3841 gtagataacg ctgttcgtac gcattttgaa ccttatgagc ggcattttaa agagatcgga
     3901 tttactgaaa ataccattaa aaaatatcta caatgcacta acatccagac agtgacggtg
     3961 cctgttcctg cgaagttttt acgtgcttca aatgtaccga ctggattgct taatgaaatg
     4021 attgcttatc tcaactcgga agaacgcaat catcataatt tttcagaact tttgcttttt
     4081 tcttgcctgt ctatttttgc cgcatgcaaa ggtttcatta cactattaac taacggtgtg
     4141 ctatccgttt ccggaaaagt gagaaatatt gtcaacatga agctggcgca cccatggaag
     4201 ctgaaagata tttgtgactg cctgtacatc agtgaaagcc tgttgaagaa aaaactaaag
     4261 caagagcaaa cgacattctc acagattcta ttagatgcca gaatgcagca cgcaaaaaat
     4321 ttgatacgcg tagaaggttc agtcaataaa attgccgaac aatgtggtta tgccagtact
     4381 tcttatttta tttatgcgtt ccgcaaacat ttcggcaaca gtccgaagag agtttctaag
     4441 gagtaccgtt gtcaaagtca cacgggtatg aatacgggca acacgatgag tgctttagct
     4501 atttgattat ttgctaacga gtagtcaacc acgcacgcta cgtaagaatt atatggggca
     4561 gccattccct gccccgcgtt gtttttaggc gatatattta ttgaaataaa taagtgacat
     4621 ccatcacata tttatgcact tgcataacct gttgcatgat tatttatgtt ctcaattcag
     4681 catcttgtca gtaaaatgca ataatttatt aaatatcaat aaattagttg tttatcggcg
     4741 agaaattact taatagaaca gaaagtaatg tcaacgcttt atggactgtt atttcccttt
     4801 ttttagctaa atctgctatc tctttatgtg actaacttca cttacatcca cttatttctc
     4861 ttcgtaaaat tacttcggaa ttaagtacaa taagaagagg aacatttatg aagtctgcat
     4921 taaagaaaag tgtcgtaagt acctcgatat ctttgatact ggcatctggt atggctgcat
     4981 ttgctgctca tgcggcagat gatgtaaagc tgaaagcaac caaaacaaac gttgctttct
     5041 cagactttac gccgactgaa tacagtacca aaggaaagcc aaatattatc gtactaacca
     5101 tggatgatct tggttatgga caacttcctt ttgataaggg atcttttgac ccaaaaacaa
     5161 tggaaaatcg tgaagttgtc gatacctaca aaatagggat agataaagcc attgaagctg
     5221 cacaaaaatc aacgccgacg ctcctttcat taatggatga aggcgtacgt tttactaacg
     5281 gctatgtggc acacggtgtt tccggcccct cccgtgccgc aataatgacc ggtcgagctc
     5341 ccgcccgctt tggtgtctat tccaataccg atgctcagga tggtattccg ctaacagaaa
     5401 ctttcttgcc tgaattattc cagaatcatg gttattacac tgcagcagta ggtaaatggc
     5461 acttgtcaaa aatcagtaat gtgccggtac cggaagataa acaaacgcgt gactatcatg
     5521 acaacttcac cacattttct gcggaagaat ggcaacctca aaaccgtggc tttgattact
     5581 ttatgggatt ccacgctgca ggaacggcat attacaactc cccttcattg ttcaaaaatc
     5641 gtgaacgtgt ccccgcaaaa ggttatatca gcgatcagtt aaccgatgag gcaattggcg
     5701 ttgttgatcg tgccaaaaca cttgaccagc cttttatgct ttacctggct tataatgctc
     5761 cgcacctgcc aaatgataat cctgcaccgg atcaatatca gaagcaattt aataccggta
     5821 gtcaaacagc agataactac tacgcttccg tttattctgt tgatcagggt gtaaaacgca
     5881 ttctcgaaca actgaagaaa aacggacagt atgataatac tattattctc tttacctccg
     5941 ataatggtgc ggttatcgat ggtcctctgc cgctgaacgg ggcgcaaaaa ggctataaga
     6001 gtcagaccta tcctggcggt actcacaccc caatgtttat gtggtggaaa ggaaaacttc
     6061 aacccggtaa ttatgacaag ctgatttccg caatggattt ctacccgaca gctcttgatg
     6121 cagccgatat cagcattcca aaagacctta agctggatgg cgtttccttg ctgccctggt
     6181 tgcaagataa gaaacaaggc gagccacata aaaatctgac ctggataacc tcttattctc
     6241 actggtttga cgaggaaaat attccattct gggataatta ccacaaattt gttcgccatc
     6301 agtcagacga ttacccgcat aaccccaaca ctgaggactt aagccaattc tcttatacgg
     6361 tgagaaataa cgattattcg cttgtctata cagtagaaaa caatcagtta ggtctctaca
     6421 atctgacgga tctacagcaa aaagataacc ttgccgccgc caatccgcag gtcgttaaag
     6481 agatgcaagg cgtggtaaga gagtttatcg acagcagcca gccaccgctt agcgaggtaa
     6541 atcaggagaa gtttaacaat atcaagaaag cactaagcga agcgaaataa ctaaaccttc
     6601 atgcggcgga attttccgcc gccttattga gcgagatagc gatgcacgtt acagccaagc
     6661 cctccagttt tcaatgtaat ctcaaatgtg attactgttt ttaccttgaa aaagagtcgc
     6721 agtttactca tgaaaaatgg atggatgaca gcactctgaa agagttcatc aaacaatata
     6781 tcgcagcgtc tggcaatcag gtctatttta cctggcaagg cggtgaaccc actctggctg
     6841 gcctggattt tttccgtaaa gttattcact atcaacaacg ctatgcaggc caaaaacgta
     6901 tttttaatgc attacaaacg aatggcattt tattgaataa tgaatggtgt tcctttctca
     6961 aagaacatga atttctggtt ggtatctcga tcgatggccc ccaggagtta catgaccgtt
     7021 acagacgcag taattcaggt aacggtactt ttgcaaaagt gatagcagcc atcgagcgtc
     7081 tgaaatcata tcaagttgag tttaatacgt taaccgtcat taataacgtt aatgtccatt
     7141 accctcttga ggtttatcat tttttaaaat ctatcggcag taaacatatg caatttatcg
     7201 aattgctcga aaccgggacg ccgaatattg atttcagtgg tcatagtgag aacacattcc
     7261 gtatcattga tttttctgtg cctcccacgg cttatggcaa gtttatgtca accattttta
     7321 tgcaatgggt taaaaacgat gtgggtgaaa ttttcattcg tcagtttgaa agctttgtca
     7381 gccgtttttt ggggaatggg catacaagtt gtattttcca ggagtcctgc aaggataatc
     7441 tggttgttga aagtaatgga gacatttacg aatgcgacca ttttgtctat ccacagtaca
     7501 aaattggaaa cattaataaa tctgaactca aaacgatgaa cagtgtacaa ctgacagcgc
     7561 aaaaaaaacg gatttcagcg aaatgtcagc aatgtgcata taaacctatc tgcaatggcg
     7621 gttgtcctaa gcatcgtatt actaaagtaa acaatgagac tgtttcttat ttttgcgaag
     7681 gttataaaat ccttttttca accatggtac cttatatgaa cgccatggtt gagttagcta
     7741 agaacagagt accgctttac cacattatgg atgttgcaaa acaaatggag aataattaat
     7801 aacgctctct tttaactcca ttcttagcct ccttcttatg accttaacaa ggcacccgac
     7861 ataaattcct gtcgggtgtt tcgtcatcat catcttccct tgcgaaaatc ctggcttacg
     7921 tggtatgcgt cagggcatta gcaataccct tgattatcaa tagcataacc ataaccataa
     7981 ccataaccac tgaaaattaa aaatttctat atatttcata ttgttaaatg atacttaaat
     8041 aaatttcatc agtaaatcat tgccatagat aatcattgga tggcacaatc aattttcgct
     8101 aatgataacc attcccatta cgttttgtat gttgatagca aagtatctct gtctgctgaa
     8161 gcccttttgg ctgcgtaaga ataataaaac ttcagtgttg ttaatcatta ttatcctcgc
     8221 aatgatcctt ggcgtggtta aaattcaggt ctggttaaac gactggaata atgatttttt
     8281 caatgcgcta agccagaaag aaaccgataa gctttggcag cttgttcttt ggttccctgc
     8341 cctgctgggg atctttgtat taatatccgt aaacaaaaca tggttaatta aactactgac
     8401 tattcgctgg cgcgaatggt taacagatta ctaccttaat cgctggtttg cagataaaaa
     8461 ctactacttc acgcagatct acggcgagca taaaaataca gataaccctg accaacgtat
     8521 cgctgaagac attctcttac tgatcagcaa aacgctcagt ctttcatttg gcttcatcca
     8581 gtcacttagc atgctgatca cctttaccgt tattctttgg caaagcgcgg gtacgctctc
     8641 attcactgtt ggtggaacag aatggaatat ccaggggtat atggtctata ccgtcgtgct
     8701 cattgtgatc ggtggaactt tatttaccca taaggttggt aagcgtattc gtccgcttaa
     8761 tgtggaaaaa caacgtagcg aagcgacatt tcgaactaat cttgtgcagc ataataagca
     8821 ggcagaactg attgcgctaa gcaatgctga gtctctacaa cgccaggagt tgcgcgacaa
     8881 ttttcatacc attaaagaga actggcatcg tttaatgaat cgtcagcggt ggcttgatta
     8941 ctggcaaaat atttattcgc gctcgcttag cgttcttccc tactttctgt tattgccgca
     9001 gtttattagc gggcagatca atctgggcgg actgatgaaa tcgcgccagg catttatgct
     9061 agtatcgaac aatttaagct ggtttattta taaatatgac gaacttgctg aactggctgc
     9121 ggttatcgat cgcttgtatg agttccatca actcactgaa cagcgcccta cgaataagcc
     9181 taaaaattgc caacatgcgg tacaagtggc taatgcgagt attcgtacgc ctgataataa
     9241 gatcatatta gagaacttga actttcatgt ttcgccaggc aaatggctat tactgaaagg
     9301 ctactctggt gcgggaaaaa ccacactgct taaaacatta tcccactgct ggccgtggtt
     9361 taaaggtgat attttttctc ctgctgacag ttggtatgtg tcacaaacac cgttaatcaa
     9421 aaccggctta ctgaaagaga ttatttgtaa agcacttccc ctgcccgtag acgataaatc
     9481 gttgagcgaa gtactgcatc aggttggtct tgggaaattg gctgcgcgta ttcatgacca
     9541 cgatcgctgg ggagatattc tttccagcgg cgaaaaacaa cgtatcgccc tggcacgatt
     9601 aattttacga cgtccgaaat ggatatttct tgacgaaact acctctcatc ttgaggaaca
     9661 agaggctatc cgcttactgc gtttagtgcg tgaaaaacta cccacaagcg gcgtcattat
     9721 ggttacacat caacccggtg tctggaacct ggccgatgat atttgtgaca ttagcgcggt
     9781 tttataaaaa caataaaagc cctgctgtac ggagatataa ataaatgaag cgagttctta
     9841 ttcctggcgt cattttatgt ggcgctgatg tggcgcaggc cgtcgatgac aaaaacatgt
     9901 acatgcattt ttttgaagag atgacggtct atgctcctgt ccctgtaccc gtaaacggca
     9961 acacgcatta caccagtgaa agcatcgagc gtttaccgac cgggaatggc aatatcagcg
    10021 atctgctgag aaccaaccct gcggtacgca tggattcaac gcaaagtacc tcgttgaacc
    10081 agggagatat tcgccctgag aaaatctcta ttcacggtgc gtcgccctac cagaatgcct
    10141 atttgattga cggtattagt gcaactaata acctgaaccc agcgaatgag tccgatgcca
    10201 gtagtgcaac caatattagc gggatgtcac aggggtatta tcttgatgtc agcttactgg
    10261 acaatgtgac gctttatgac agttttgtgc cggttgaatt tggtcgcttc aatggcgggg
    10321 taattgatgc aaagatcaaa cgcttcaacg ctgatgatag caaggtgaaa ttgggttatc
    10381 gcactacgcg ttcggactgg ttaacatcgc atatcgatga gaataacaag agcgcattta
    10441 atcaaggttc ttcaggaagt acttatttct ctccagattt taaaaagaac ttttatacct
    10501 tgtcgtttaa tcaggagctg gctgataact ttggcgttac cgccggttta tcgcgccgcc
    10561 agtctgatat cacccgcgcg gattatgttt cgaatgacgg cattgtcgtc ggtcgggcac
    10621 agtataaaaa cgttatcgat actgcattga gcaaatttac ctggtttgcc agcgaccgct
    10681 ttacccacga tttaacctta aaatataccg gctccagccg tgattataat accagcacct
    10741 tcccgcagtc tgatcgcgaa atgggtaata aatcctatgg tcttgcatgg gatatggata
    10801 cgcaactcgc atgggccaaa ctacgtacca ccgttggttg ggatcatatt agtgattata
    10861 cccgtcacga tcatgacatc tggtacaccg aactttcatg tacatatggt gatattacag
    10921 ggcgttgtac ccgtggcgga ttaggacaca tttcccaggc tgtagataat tacaccttca
    10981 aaacacgcct ggactggcaa aaattcgccg tgggtgatgt ttcgcatcaa ccctactccg
    11041 gcgcggaata catctattcc gatgcatgga ctgaacgcca taaccagtct gaatcctatg
    11101 tgattaatgc tgcaggaaag aaaactaacc ataccattta ccataaaggt aaaggcagcc
    11161 taggaattga caactacacg ctgtatatgg cggatcacat tagctggcgg aatgtgtcgt
    11221 taatgcccgg tgtgcgttat gactatgaca actatctgtc aaaccacaat atctccccgc
    11281 gctttatgac ggaatgggat atttttgctg atcaaacctc aatgattacc gccggttata
    11341 accgttacta tggcgggaat attcttgata tgggattacg tgatatccgc aatagctgga
    11401 cggaatcggt atcaggtaat aaaaccctga cgcgttatca gaatttgaaa acgccttata
    11461 acgatgaact ggcaatggga ttgcagcaaa aaatcggtaa gaacgttatt gcacgcgcaa
    11521 actatgttta ccgtgaagcg catgatcaaa tcagcaaaag cagtcgtacc gacagcgcga
    11581 ctaaaaccac cattactgaa tataacaacg atggcaaaac caaaacgcat tcgtttaacc
    11641 tcagttttga actggccgaa cccctgcata tccgccaggt agatattaac ccgcaaattg
    11701 tctttagcta tatcaagagc aagggcaact tgtcgttaaa caatggttat gaggagagca
    11761 ataccggtga taaccaggtg gtttataacg gtaatctggt ctcttacgat agcgttccag
    11821 tggcagattt taataaccca ttaaagatct ccttaaacat ggatttcacg catcaaccga
    11881 gcgggttagt gtgggcgaat acgctggcgt ggcaagaagc gcgtaaagct cgcattatcc
    11941 ttggtaagac aaatgcgcaa tacatcagcg aatattcaga ttacaagcag tatgttgacg
    12001 aaaaactgga tagcagcctg acctgggaca cccgcttgtc ctggacgcca caatttctga
    12061 aacaacaaaa cctgacgatc agtgccgata ttctcaatgt actggatagc aaaaccgctg
    12121 ttgatacaac gaataccggt gtggcgacct acgccagtgg ccgtactttc tggcttgatg
    12181 tcagcatgaa attttaatag ttcggatttt acttaaccgg gtaaattcgc ccggttttcg
    12241 catggagata attatgagaa acctctgttt cttactgacg ttagtggcaa ctctgttgct
    12301 ccccgggcgg ctgattgccg ccgccttacc gcaggatgaa aagttaatta ccgggcaact
    12361 ggacaatggc ttgcgatata tgatttatcc gcatgctcaa ccaaaggatc aggtaaattt
    12421 atggctgcaa attcataccg gttcattgca ggaagaagac aatgagcgcg gcgtggctca
    12481 ttttgtagaa catatgatgt ttaacggcac aaaaacatgg ccgggtaata aagtcatcga
    12541 aacatttgag tcaatgggcc tgcgttttgg tcgcgatgtt aatgcctata ccagctatga
    12601 cgaaacggtg tatcaggtga gtttgccgac tacgcagaaa caaaatctgc aacaagtgat
    12661 ggcaatcttc agtgaatgga gtaatgccgc aacctttgaa aaactcgaag tagacgctga
    12721 acgtggcgta attactgagg aatggcgtgc ccatcaggat gcgaaatggc gcacctctca
    12781 ggcgcgccgc cctttcctgc tggctaatac ccgtaattta gaccgtgaac ctatcggcct
    12841 gatggatact gtcgccacgg tcacaccggc acaattgcgc caattttatc aacgctggta
    12901 tcaaccaaat aatatgacct ttatcgtggt cggcgatatc gacagtaaaa aagcgctggc
    12961 gctgataaag gataatttaa gtaagcttcc ggctaacaaa gcagctgaaa atcgcgtctg
    13021 gccgacaaaa gccgaaaacc acctgcgctt taatatcatt aatgataaag aaaaccgggt
    13081 gaacggcatc gcactctatt atcgcctgcc aatggtacaa gtgaacgatg agcaaagctt
    13141 tatcgaacaa gctgaatgga gcatgttagt tcagctgttc aatcaacgtc tgcaggaacg
    13201 catacagtcg ggcgagttga agactatttc tggcggcact gcgcgcagcg ttaaaattgc
    13261 acccgattat cagtcgctgt ttttccgtgt aaatgcacga gacgataata tgcaggatgc
    13321 tgcgaatgca ttaatggcag agttggcaac cattgatcag catggttttt ctgctgaaga
    13381 actcgatgat gtcaaatcta cccgcctcac ctggctgaaa aatgcggttg atcagcaagc
    13441 tgaacgtgat ttacgtatgc tgaccagtcg cctggcatcc agctcattaa ataatacgcc
    13501 gttcttgtcg ccggaagaga catatcaact ttcgaaacgt ctgtggcagc aaattaccgt
    13561 gcaaagtctg gcggaaaaat ggcagcagtt aagaaagaac caggacgcat tttgggagca
    13621 aatggtaaac aatgagcttg ccgccaaaaa agcattgtct cctgcggcta tcctggcgct
    13681 ggaaaaagag tacgccaaca aaaagctggc ggcttacatc ttcccaggca gaaatttatc
    13741 gttaacagta gacgctgacc cacaggcgga aattagcagc aaagaaacgc tggctgagaa
    13801 tctgacatca ttaacacttt ccaatggtgc cagggttatt ctggcaaaat ccgcgggtga
    13861 agagcaaaag ctacaaatta ctgccgtatc gaataaaggc gatttaagtt tccctgcgca
    13921 gcaaaaatca cttatcgcgc tggcaaataa agcagtaagc ggaagcggcg ttggtgagct
    13981 ctcctcttcc agcctgaaac gctggagtgc ggaaaattcg gtaaccatga gcagtaaagt
    14041 cagtggcatg aatacgttgc tctccgttag cgcgcggact aataaccctg aacctggttt
    14101 tcagttgatt aaccagcgaa tcacccacag cacgattaac gacaatattt gggcatcgct
    14161 acaaaatgct caaattcagg cgttgaaaac gctcgaccag cgtccagcgg agaaattcgc
    14221 ccagcagatg tatgagacgc gctatgctga tgaccgcacg aaattactgc aagaaaatca
    14281 gattgtacag tttactgccg cagatgcgct ggctgccgat cgccagttgt tttcatctcc
    14341 agcggatatc acgtttgtca ttgtcggtaa tgtctcagaa gacaaactcg tggcgttaat
    14401 tacgcgttac ttaggatcaa tcaaacactc tgattcgcca ttagccgcag gtaaaccatt
    14461 aactcgcgcg acggacaacg catcggttac tgtaaaagaa caaaatgaac ctgtggcaca
    14521 ggtttcacag tggaagcgtt atgattcccg gacacctgtt aatctggcga cgcgtatggc
    14581 gctcgatgct tttaacgtcg cactggcaaa agatctacgt gttaatattc gtgaacaggc
    14641 atctggagca tacagcgttt cttctcgcct ctcggttgat cctcaggcca aagatatcag
    14701 tcatttgctg gcttttactt gtcaaccaga acgacatgat gaactgttaa cgttggcgaa
    14761 tgaagtgatg gttaagcgtc tggctaaagg gatcagtgag caagaactga atgaatacca
    14821 gcaaaacgtt cagcgcagcc tcgatatcca acagcgtagc gttcaacaat tagcgaacac
    14881 tattgtaaat agtcttattc aatatgacga tcctgcagca tggactgagc aggagcaatt
    14941 gttgaaacaa atgacggtag agaatgttaa cactgccgtt aaacaatatc tttctcatcc
    15001 ggtaaatact tataccggag tattattgcc aaaataataa cagccccgtc aacacatcgt
    15061 tggcggggat tttagcaata ttcgctattt ttatgtaata attttataaa tgcgttcaaa
    15121 ataataatca agtactaata gtgatatttt aaggtctgat ttttacgtga taattcagga
    15181 gacacagaat gcgcataaaa ataacagcat aaaacacctt accaccaccc aagaatttca
    15241 tattgtattg tttttcaatg aaaaaacatt attcgcgtaa tatctcacga taaataacat
    15301 taggattttg ttatttaaac acgagtcctt tgcacttgct tactttatcg ataaatccta
    15361 cttttttaat gcgatccaat cattttaagg agtttaaaat ggataagaag caagtaacgg
    15421 atttaaggtc ggaactactc gattcacgtt ttggtgcgaa gtctatttcc actatcgcag
    15481 aatcaaaacg ttttccgctg cacgaaatgc gcgacgatgt cgcattccag attatcaatg
    15541 acgaattata tcttgatggc aacgctcgtc agaacctggc cactttctgc cagacctggg
    15601 acgacgaaaa tgtccacaaa ttgatggatt tatccattaa
//
LOCUS       DADMIB010000097        15365 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.097, whole genome shotgun sequence.
ACCESSION   DADMIB010000097 DADMIB010000000
VERSION     DADMIB010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15365
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.097"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(73..516)
                     /locus_tag="JNZ89_002776"
     CDS             complement(73..516)
                     /locus_tag="JNZ89_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HAY8936590.1"
                     /translation="MAELQKVDDWLSALLANLEPAARSRMMRQLAQELRRTQQQNIRM
                     QRNPDGSSYEPRRVTARSKKGCIKRQMFTKLRTTKYLKTAASADSASVQFEGRVQRIA
                     RIHHYGLSDRVSRKGIYTIYAKRQLLGFNVQSIELIERMFIKNLT"
     gene            complement(509..940)
                     /locus_tag="JNZ89_002777"
     CDS             complement(509..940)
                     /locus_tag="JNZ89_002777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936591.1"
                     /translation="MNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVASGASSMSW
                     EYRYTLNVVIEDFSGDQNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVC
                     DISLNLQLTERVLVSTDGSVSNVEAVAEPDEPEEMWTVKRG"
     gene            complement(1036..1464)
                     /locus_tag="JNZ89_002778"
     CDS             complement(1036..1464)
                     /locus_tag="JNZ89_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HAY8936592.1"
                     /translation="MNRLLLVVLALLLAALGWQTWRLADASQTISTQADELQSKSQAL
                     AKSNSQLISLSILTETNNREQARLYAEAEQTSVLLRQRQRRIEELKRENEDLRRWADT
                     PLPADIIRLRERPALTGGAAYRQWLSASDAVSAGAGSAAH"
     gene            complement(1461..1838)
                     /locus_tag="JNZ89_002779"
     CDS             complement(1461..1838)
                     /locus_tag="JNZ89_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000730949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936593.1"
                     /translation="MKKKLISGLFLMLWMALLIAAMVYPQGIFPVLAASGVWVACLLT
                     WAVIPVALASLIKNGPLWQELRASLLKTITRKENVFISWVIRLLIVVSLAWTGWAITL
                     VFYLLTVIAFWITHNQMAQQVAA"
     gene            complement(1840..2352)
                     /locus_tag="JNZ89_002780"
     CDS             complement(1840..2352)
                     /locus_tag="JNZ89_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001069913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY8936594.1"
                     /translation="MNPSIVKRCLVGAVLAIAATLPGFQQLHTSVEGLKLIADYEGCR
                     LQPYQCSAGVWTDGIGNTSGVIPGKTITERQAAEGLISNVLRVERALEKCVKQQPPQK
                     VYDAAVSFAFNVGTGNACSSTLVKLLNQRRWADACRQLPRWVYVKGVFNQGLDNRRAR
                     EMAWCLQGAN"
     gene            complement(2333..2548)
                     /locus_tag="JNZ89_002781"
     CDS             complement(2333..2548)
                     /locus_tag="JNZ89_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936595.1"
                     /translation="MTLERISAFITYCIAVVLAWLGDLSIKDASTLGGLMIGVLMLAI
                     NWYYKHKAYQLLRDGQISREDYESINR"
     gene            complement(2552..2755)
                     /locus_tag="JNZ89_002782"
     CDS             complement(2552..2755)
                     /locus_tag="JNZ89_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936596.1"
                     /translation="MKVRAHQYDTVDALCWRHYGRTQGVTEQVLKANPGLAEYGPFLP
                     HGLQVELPDIPTTTTVQTVQLWD"
     gene            complement(2755..3219)
                     /locus_tag="JNZ89_002783"
     CDS             complement(2755..3219)
                     /locus_tag="JNZ89_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HAY8936597.1"
                     /translation="MKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSVMRTDGTVTQPR
                     LKQVALSAISEVNAELYEFRRRQQMLGYASLAEVPAEQLDGKSERIQHYFNAVYYWAR
                     AMLNERFQDYDATASGAKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI"
     gene            complement(3315..3965)
                     /locus_tag="JNZ89_002784"
     CDS             complement(3315..3965)
                     /locus_tag="JNZ89_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HAY8936598.1"
                     /translation="MSLSPARQHRLRVQAEQAVREGGSVRHASGYDLMLLQLAEDRRR
                     LKGVQSTVKKAEIKVELLPKYAAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALE
                     IGRHALRHGWVMPLGNRNVQTVLTEEMADAAQSAMLAATGFDADLLLQTLELTDGLDM
                     PDQSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKDKQQLERRLRNDSR"
     gene            complement(3969..5027)
                     /locus_tag="JNZ89_002785"
     CDS             complement(3969..5027)
                     /locus_tag="JNZ89_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HAY8936599.1"
                     /translation="MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQ
                     IQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKC
                     EQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
                     PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNE
                     LIDVVYQDDDDLVVICGRELLSDKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRA
                     PFFPPNALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAAL
                     VENIQISDFSAAAAETGA"
     gene            complement(5044..5877)
                     /locus_tag="JNZ89_002786"
     CDS             complement(5044..5877)
                     /locus_tag="JNZ89_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HAY8936600.1"
                     /translation="MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALIN
                     LEHIKSYLPDSTFNRYGKVTALFAEEITEGPLAGKMALYADVEPTESLVELVKKGQKL
                     FTFMEVSLKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFT
                     AAEETVIELEEVQDDKPSLFARVTALFTKKEQSDDARFSDVHKAVELVATEQQNLSAR
                     TEKSLSEQEERLSELETALQAQQTAFNELVDKLSHEDSRQDYRQRATGGNAPADTLTN
                     C"
     gene            6020..7786
                     /locus_tag="JNZ89_002787"
     CDS             6020..7786
                     /locus_tag="JNZ89_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HAY8936601.1"
                     /translation="MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWK
                     KRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNG
                     GNEADLNPNVANRNKGPRRQPEKNVFTDDQIEKLEKIFHSSMFNYQRHWWEAGKTNRI
                     RNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVEL
                     KGDPMVLPNGATLYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWR
                     QTYFSTPSSLTHSAYPFWSGALFNRGRNKADKVDIDLSHSNLAPGRLCADGQYRQIVT
                     VEDAVRGACNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVW
                     TDFHALALRPFGWREVWIGYDPAKGTQNGDSAGCVVVAPPAVPGGKFRILERHQWRGM
                     DFRAQADAIKKLTEQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVL
                     KAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATM
                     HALFNEPLQGESANTSNIVEIF"
     gene            7786..8817
                     /locus_tag="JNZ89_002788"
                     /pseudo
     CDS             7786..8817
                     /locus_tag="JNZ89_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000520363.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            complement(8924..9805)
                     /locus_tag="JNZ89_002789"
     CDS             complement(8924..9805)
                     /locus_tag="JNZ89_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004982020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936602.1"
                     /translation="MKWAIEMNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFIL
                     NAYRSYIKNKGYLNVNSCGVLSNNIAEALRYYYNNPAKCLSIIDDIRAANSNSLCPMC
                     GSMHSGTLDHVLPKENYPEFSLFTKNLVPACKCNTFKSTTIANSAGHRMLHPYFDNIL
                     KQRLICANFSKLGRTPTIDVKIIIDPMSPEYNNVKYHLDNVVIKNNIKGYLSEQWESF
                     YLYPELVIRGLNKSLSTYSDVYELLTRELLLLDEKHKGKNNWNSVFVAGLIRPDVIRW
                     ILCELHLGNRSPDGRLI"
     gene            complement(9789..11438)
                     /locus_tag="JNZ89_002790"
     CDS             complement(9789..11438)
                     /locus_tag="JNZ89_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000960487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY8936603.1"
                     /translation="MLVKKNKNYSLYFLITNNQQISDSGNYIKIVPSRSDWNDFGYLS
                     RVEISIFNKKECKDIISLNGYIGFLNSEEERNGKAELIRRVKKKEESNLKDEGFNDYF
                     VMLQDMNNYRRLVRFFGVNESKYILNFINDVVSKKSDASAENLRKKAISSDIFNKSFI
                     RESESYFTFKNAGTVLSGIQYEELGNLSQHIKISYSNKVNEEDVSYVFNFDHEHDLPK
                     RISIIIGENGVGKSQTLREIALAAIKGKDNLVAVVDSNGVSIEERIQISRLIAFSPTN
                     ESKCSFPTDKRIKSLIWYKRLTLNRESKSKLNLNDLIVQLARSNDAIGYNQRWNIFVD
                     ALSVLNSNNDLVIKCGGENSPFVKLNELNSRGEESRLSLYSEIILSGEPLRLIENKCY
                     PLSSGEISFIKFCVQVCLYIENGTLLLIDEPETHLHPSFINKFMALLDNLLEKTGSSA
                     IIATHSVYLVREVFKEQVTILRRRDDGVIVSEKPRLSTFGANIGNISYFVFGESEPTQ
                     ILNKVKNNIIAKNMSWDDVESKYSEDLSLNVLTALRNEMGN"
     gene            complement(11731..11964)
                     /locus_tag="JNZ89_002791"
     CDS             complement(11731..11964)
                     /locus_tag="JNZ89_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY8936604.1"
                     /translation="MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTVIRIRKGS
                     SNGVELTGLQLDEERKQVMKIMQKVWEDDSWLH"
     gene            complement(11975..12163)
                     /locus_tag="JNZ89_002792"
     CDS             complement(11975..12163)
                     /locus_tag="JNZ89_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936605.1"
                     /translation="MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDE
                     LMAKIRTHEYNRSMDVIS"
     gene            complement(12317..14731)
                     /locus_tag="JNZ89_002793"
     CDS             complement(12317..14731)
                     /locus_tag="JNZ89_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000017528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HAY8936606.1"
                     /translation="MSHADMNNCCGFNEAAAAFSWNSPKKAINPYLDPAEVAPVSALS
                     NLITLYAADNEQEQLRREALSDQVWERYFFYESRDPVQHEMEQDKLISRAKLAHEQQR
                     FNPDMVILADVNAQPSHISKPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLEHVRD
                     SQLSASFRFMASHVGLDGLLILPEMSQDQVKRLSTLVAAHMSMCLDAACGDLYATDDV
                     KPEEIRKTWEKVAAETLRLDVIPPAFEQLRRKRNRRKPVPYELIPGSLARMLCADWWY
                     RKLWKMRCEWREEQLRAVCLVSKKASPYVSYEAVMHKREQRRKSLEFFRSHELVNEEG
                     DTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNN
                     GRPNPTWTNATVRQSSDYLVGMFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCF
                     MRKKDRRAITALLRKFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNID
                     GRGLAGEISKETGKSLRDNAEYVNPWASLHRVQQFRFFGIPGRQAYRELRLLAGQAAR
                     QQGDKKAGAPVLDNPRLDAILAAADAGCFATYIMRQGGVLVPRKYHLIRTAYEINEEP
                     TAYGDHGIRIYGIWSPIAEGKICTHAVKWKMVRKAVDVQEAAADQGACAPWTRGNNCL
                     LAENLNQQEKDKSADGNPRTDITSMDDKELHDYLHSMSKKERRELAARLRLVKPKRRK
                     DYKQRITDHQRLQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLQEDD
                     QWRNLY"
     gene            complement(14728..>15365)
                     /locus_tag="JNZ89_002794"
     CDS             complement(14728..>15365)
                     /locus_tag="JNZ89_002794"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HAY8936607.1"
                     /translation="RVLFEIANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYR
                     GLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQRATFICASFDETLAMLKAGDVV
                     YCDPPYDGTFSGYHTDGFTEDDQYHLASVLEHRSSEGHPVIVSNSDTSLIRSLYRNFT
                     HHYIKVKRSIGVAAGEGKSATEIIAVSGPRCWVGFDYSRGVDSSAVYGVRA"
BASE COUNT         3765 a         4152 c         3525 g         3923 t
ORIGIN      
        1 accttaaaat caccatcata cactaaatca gtaagttggc agcattacca ctcaattgaa
       61 aacaaataaa aatcaagtta ggtttttaat gaacattctt tcaattaact caatagattg
      121 gacattaaaa cctaataact gccttttcgc atagatggta taaatacctt ttcgactgac
      181 gcgatcactc aagccgtaat ggtgaatacg ggcaatgcgc tgcaccctac cttcaaactg
      241 tacgctggca gaatcggcgc tggctgcagt tttcaggtat tttgtggtgc gcagctttgt
      301 aaacatctga cgtttgatgc accccttttt gctgcgtgct gttaccctgc gcggctcata
      361 actgctgcca tcaggattgc gctgcatcct gatgttctgc tgctgtgtcc ggcgcagttc
      421 ctgcgccagc tggcgcatca tgcggcttct tgcggctggc tccagattcg ccaataatgc
      481 actcagccag tcgtccacct tctgcaattc agccacgttt caccgtccac atttcttcag
      541 gttcatcagg ttccgctacc gcttcaacgt tcgacacact gccgtcagtg ctgaccagca
      601 cacgctccgt cagttgcagg ttaaggctga tatcacagac atcgttgcgc agaatatcca
      661 cctcaaaggt gaatagcttt tcccgtaacg ccgggttatt gatcgcatca ggctggttat
      721 cccgcagcca cagcaaaacc ggggccatca gcagattctg gtcgccgctg aaatcttcaa
      781 tcaccacgtt cagggtgtag cggtactccc atgacatgga gctagccccg gaggcaacca
      841 gcgaaccgtt atccacaaac agatgcagtt tgtccgggtt attacggaca taaggcactg
      901 ctttattgag ggcgtggcgc agggattgtg gtttgttcac tgtttcgctc ctgacacgca
      961 ataatcatgt ccactttgtc tacacagacc gcccaggcgg cctccgtttc atccagcaac
     1021 gcattcaaat caccgttagt gcgcggcgct gcctgctcca gccgacacgg cgtcactcgc
     1081 ggacaaccac tgacggtaag ctgcacctcc ggtgagtgcc ggacgttccc gcagccggat
     1141 aatgtcagca ggcaaaggag tatcagccca gcgacgtaaa tcctcgttct cacgtttcag
     1201 ttcctcaatc cggcgttgtc gttgtctcag cagtacactg gtctgttctg cttcggcata
     1261 gagccgcgcc tgctcccggt tattggtttc agtcagaatg gacaggctga taagctggct
     1321 gttgctcttt gccagtgcct ggcttttgct ctgcagctcg tctgcctgcg tgctgatggt
     1381 ctggctggca tcagccagcc gccacgtctg ccagcccagc gccgccaata ataacgccag
     1441 cacaaccagc agcaaccggt tcatgcggct acctgttgcg ccatctgatt atgggtgatc
     1501 cagaaggcaa taacggtcag cagataaaag accagggtaa tggcccaccc cgtccaggcg
     1561 agactgacga caatcagcaa tcgtatcacc cagctgataa atacgttttc ttttcgggta
     1621 attgtcttca gtaaagatgc cctcaactcc tgccagagcg ggccattctt aattaacgaa
     1681 gccagtgcta ccggaattac cgcccatgtc agtaaacagg ctacccaaac gccggacgct
     1741 gccagtaccg gaaaaatccc ctgcggatac accattgctg cgattaacag cgccatccat
     1801 aacatcagaa acagcccgct gattaatttc tttttcattt cagtttgctc cctgtaaaca
     1861 ccaggccatc tcccgcgcac ggcggttatc cagcccctga ttaaaaacac ctttcacata
     1921 aacccagcgc ggcaactgtc ggcacgcatc cgcccagcgc cgctgattga gcaatttcac
     1981 cagcgtggaa ctgcaggcat tgcccgtacc cacgttgaag gcaaacgaca ccgcagcgtc
     2041 atacaccttc tgcggcggct gttgcttcac acacttttcc agcgcccgct ccacacgcag
     2101 cacgttggag atcagccctt ctgctgcctg tcgctccgta atggttttgc cgggaatgac
     2161 gcccgacgta ttaccaatac cgtcggtcca gacacccgcg ctgcactgat acggctgcag
     2221 acgacaacct tcgtaatcgg caatcagttt cagtccctcc acggaggtgt gaagctgctg
     2281 aaaacccggc agcgtggcag caatagccag cacggccccg acaaggcagc gtttaacgat
     2341 tgatggattc atagtcctcc cgcgagatct gcccgtcgcg cagaagctgg taggctttgt
     2401 gtttgtagta ccagttgata gccagcatca gcacaccaat catcaggccg cccagcgttg
     2461 aggcatcctt gatggacaaa tcgcccagcc aggccagcac gacggcgatg caatacgtga
     2521 taaaggcgct gattcgctca agcgtcataa ttcagtccca tagctggacg gtctgcacgg
     2581 tggtggtggt cggaatgtcc ggcagctcca cctgcagccc gtgaggtaaa aaggggccgt
     2641 attcggcaag ccccggattt gccttcagta cctgctccgt gacaccctgc gtgcgcccgt
     2701 aatgacgcca gcaaagcgcg tccaccgtgt catactgatg cgcacgcact ttcatcagat
     2761 aagctccact gtgcagtgcg gcgcgtcctg cacccggctg atggcccagc gggcgtcacg
     2821 ccacaaatca ccgcttgctt ccgccagttc ttcgccccgc ttcgcaccgg atgccgtggc
     2881 gtcatagtcc tggaaacgtt cgttgagcat ggcgcgagcc cagtagtaaa ccgcgttgaa
     2941 atagtgctga atgcgctcac ttttcccgtc cagctgttcc gccggaacct cagccagcga
     3001 cgcatacccc agcatctgct ggcgtctgcg aaactcatac agctctgcgt taacctccga
     3061 aattgccgac agtgcaacct gctttaaacg cggctgcgtc accgtgccgt cagtgcgcat
     3121 gacactgcga aactccgaca ggtccacatc aggccagaac ggcgtatttc taatgatttc
     3181 cgcctgttcc ggtgcctgtt ctggcgcaac aaacttcatg ctgctttctc ctgaaataaa
     3241 gggcggtgga cggggttttg atgtggctgt gcctttcgcc accccgtgcc gcccgtgcgc
     3301 gggggcacgt tctgtcagcg gctgtcattg cgcagtctgc gctccagctg ctgtttgtct
     3361 tttttcacgc cacagcgggg atcgagctgt aacgcatggt tgagatgatt aagggcggaa
     3421 gccggattgc tttcactcag gaccgcgcca atcgctttat gcagacgtgc ccgtgactgg
     3481 tccggcatat ccagaccgtc tgtcagctcc agcgtctgca gcaacagatc ggcatcaaag
     3541 ccggtggcgg caagcattgc gctctgcgct gcatctgcca tttcctctgt cagcacggtc
     3601 tgcacgttgc ggttgcccag cggcatcacc catccatgac gcagggcatg acgcccgatc
     3661 tccagcgccc cggcataatc tccggcatca atgcgccaca acatcacgta catcagcacg
     3721 tcatcctgtt gagcgcctcc ggcagccagg acaccctccg cccaggcggc gtacttcggc
     3781 agcagctcca ctttgatttc cgcttttttg accgtggact gaacgccctt gagacggcgg
     3841 cggtcttccg ccagttgcag cagcatcagg tcatagcccg atgcgtggcg aacactgcca
     3901 ccctcacgga cggcctgttc agcctgaacg cgcaggcgat gctgccgtgc gggactcagg
     3961 ctcatggatt acgctccggt ttcggctgcg gcggcgctga aatcactaat ctggatgttt
     4021 tccaccagtg cggcgcagcg gtagtcctca accacatagg cttcgttaac ggattcaaag
     4081 ttttcaatcc ggtcacgttt cgggttgtcg ataactgaac ggcggcgggt gtcttcctgc
     4141 cagtagatgg acaggttatc cagacgggtg atcagcagcg cattcggcgg gaagaacggc
     4201 gcacgcacgg cctgcaggcc acccatgcgt ttctgactga tgatcatatc ggcagccagt
     4261 ttttcactgt tttcctgctc tttgttgacc agcgggaaat acttgtcaga cagcagttca
     4321 cgaccgcaaa tcaccaccag atcgtcatcg tcctggtaga ccacgtcgat aagctcattg
     4381 acggcatcca tcaccacggc gtccaggttg gcatattcgc cacctttccc gactttcact
     4441 gcgcccggtg tggtttcacc gcccgtggtg gtgctgccca tgacgtgatc cggtgcatcc
     4501 tcacggattt tctgcagcca gcctttattc acatcctgca gcagcgggtt ttcgctacgg
     4561 ttggaggttt tcgcacgctt cacgccatta aagccgatca tgatgcggtc cagtgcctga
     4621 cgtttcacga tggcgtcacg gatacgcacc tgaaaatcct gaaacttcgc ccacaggtcc
     4681 agcttcgcgt aggtcagcac cgtgtcaaag ttggtctgct cgcatttata ttccacatcg
     4741 accatcagcg tcggatcgac aggttcacgc tctttcgcag tggtatcagt ggttccggca
     4801 atggtgctgc caactcccaa ccccagcagc tgaccggact gctcagtcac tggcgtgacg
     4861 ttaatcagag tcaggaaagc ggcggactgc tggatctggt cttccagcgt ctgctgcacg
     4921 gacggctcta cggtgaactt gctggacagt tcttcaactg ccacaccgtt cagacgcgcc
     4981 agttgctgca ggtaagcgtt aaaagcaaag cgggtattct tcttcatcag gttttgtgct
     5041 ccatcagcaa ttggtcagag tgtcagcggg ggcgttaccg cctgttgcac gctggcggta
     5101 gtcctggcgg ctgtcttcat gactcagctt gtccaccagt tcgttaaagg cggtttgctg
     5161 tgcctgcagg gcagtctcca gctcagacag gcgttcttcc tgctcagaca gggatttttc
     5221 ggtgcgtgcg ctcaggttct gctgctcagt ggcgaccagc tccacggcct tatgcacatc
     5281 agagaaccgg gcgtcatcgg actgctcttt tttggtaaac agcgccgtga cgcgggcaaa
     5341 cagggacggt ttgtcgtcct ggacttcttc cagttcgatc accgtttcct ctgcggcggt
     5401 aaagagattg gcgggattct gcttgcggtt tgccagcggg ttatgggctg cactggcgct
     5461 gaatgtcagc atttcagtgc ccagactggc agggtcatca gtggcagcca ggccgactag
     5521 gtaggctttg cccgtatcag cgaacttcag gctgacttcc ataaaggtga ataatttctg
     5581 gccttttttc accagttcca ccagggactc cgttggctca acgtcagcat acagcgccat
     5641 cttgcctgcc agcggacctt ccgtgatttc ttcagcaaac agcgccgtca ccttgccgta
     5701 gcggttaaag gtgctgtccg gcagataaga cttgatgtgc tcaaggttaa tcagcgcggt
     5761 atacaccgcc gggttatagc tggctgccat ctgttccagc cattcacgct ggatttcgcg
     5821 tccgtcggtg gtggcacctt ccaccccgat gcgaaaacgc tttgctttca ctgtcatgag
     5881 ccgtgctccg ttagaaaaaa cttactggag ccttatggtt gcggtgatag gggcagtgaa
     5941 acaatgcgcg gtatttgtac cgacaaccac acaaaccgca ggcggggaaa gccttcattc
     6001 aaggctgtag gtttgtgcca tgaacaccac actgacaccc gcagatctcg atccccgtcg
     6061 gcaggccatg ctgctgtact ttcagggata ccgcgtagcc cgcattgctg aaatgctggg
     6121 cgagaaagtt gcaaccgttc acagctggaa aaaacgcgac aagtggggtg actatgggcc
     6181 tctggatcag atgcagctca ccaccgccgc acgctactgc cagctcatca tgaaggagca
     6241 caaagaaggg aaagatttca aagagattga cctgctggcg cgccagtctg agcgccacgc
     6301 gcggatcggc aagtttaaca atggcggcaa cgaagccgac ttaaacccta acgtcgccaa
     6361 ccgcaacaaa ggcccacgcc gtcagcctga aaagaatgtt ttcaccgatg accagattga
     6421 gaagctggaa aaaattttcc attcctccat gttcaactac cagcgccact ggtgggaagc
     6481 cggaaaaacc aaccgcatcc gcaacctgct gaagtcacgc cagatcggcg cgaccttcta
     6541 ttttgcccgt gaagccctga ttgacgccct gcttaccgga cgtaaccaga ttttcctttc
     6601 tgccagtaag gcacaggccc acgtcttcaa acagtacatc atcgactttg ccaaagaagt
     6661 ggaggtggag ctgaaaggcg atccgatggt gcttcccaac ggggccacac tgtatttcct
     6721 cggcaccaat gcccgcactg cccagagtta tcacggtaac ctgtatctgg atgaatattt
     6781 ctggataccg aaatttcagg agctacgcaa agtggcttcc ggtatggcta ttcacaagaa
     6841 atggcggcag acctattttt ccacaccatc cagtctgacc cacagtgctt atccgttctg
     6901 gtccggtgcg ctgttcaacc gtgggcgcaa caaagctgac aaggtggaca tcgacctgtc
     6961 ccacagcaat ctggcccccg gccggctgtg cgcagacggg caataccgcc agatagtcac
     7021 cgtggaagat gcggtgcgcg gcgcctgtaa cctgttcgac cttgaccagt tgcgcatgga
     7081 gtacagccct gacgaatacc agaacctgct gatgtgcgag ttcgtggacg atctcgcgtc
     7141 cgtgttcccg ctcagcgaat tgcaggcgtg catggtggac agctgggaag tctggaccga
     7201 ctttcatgca ctggccctgc gcccgtttgg ctggcgcgaa gtgtggatcg gttatgaccc
     7261 ggcaaaaggt acgcagaacg gcgacagcgc cggatgcgtg gtggtggcac cgccagccgt
     7321 gccaggcggt aagttccgca ttcttgagcg tcaccagtgg cgcggaatgg actttcgcgc
     7381 ccaggctgac gccatcaaaa aactgactga acagtacaac gtgacctata tcggcatcga
     7441 ctcaaccggc gttggtcacg gggtttacga gaacgtgaaa gcgttttttc ctgccgtccg
     7501 ggagtttgtc tacaacccca acgttaaaaa cgccctggta ctcaaggcct acgacattat
     7561 cagccaccgc cgtcttgagt ttgacgccgg gcacaccgac attgcgcagt cattcatggc
     7621 aatccgtcgc gccaccaccg ccagcggcaa ccgcccgacc tatgaagcca gccgcagcga
     7681 agaagccagc catgccgatc tggcctgggc aacaatgcac gcactgttta acgaaccgct
     7741 gcagggcgag tccgccaata ccagcaatat tgtggagatt ttttgatggg aaagagtaag
     7801 aagaaccgcg ctgcggcgac gaaacagacc cagcataaaa accagacttc agccgaagca
     7861 ttcagcttcg gcgatcccgt tccggttctg gaccgccgtg aactactgga ctatgtggaa
     7921 tgcgtacaga cagatcgctg gtatgagccg ccagtgagtt ttgacggact ggcgcgcacc
     7981 ttccgcgccg ccgtgcatca cagttcacca attgcggtga aatgcaacat tctgatcagt
     8041 acctacatcc ctcacccgct gctcagccag caggcttttt cacgttttgt gcaggattat
     8101 ctggtatttg gtaacgctta cctggagaaa cgcacaaacc ggttcggaga ggtcatcgct
     8161 cttgagcctg ctctggcaaa atacacccga cgcggattag acctagatac ctactggttt
     8221 gtgcaatacg gcatgaccac gcagccgtat cagttcacga aaggaagcat ctttcatctg
     8281 atggaaccgg acatcaacca agagatctac ggcctgccag gttacctttc tgccattccg
     8341 tcagccctgc tcaacgagtc cgccacgctg ttccgccgat agtattacat taacggcagt
     8401 catgcaggct tcatcatgta catgaccgat gccgcgcaaa accaggagga tgtgaacaac
     8461 ctccgcaatg cgatgaaaag cgccaaagga ccaggtaact tccgcaatct gtttatgtac
     8521 tcgcctaacg gcaaaaagga cgggcttcag atcatcccgt tgtcagaagt cgcggcgaag
     8581 gatgagtttc tgaacatcaa gaacgtgagc cgggatgaca tgatggcggc gcatcgtgtg
     8641 ccaccgcaaa tgatggggat tatgcctaat aatgtcgggg ggtttgggga tgtggagaag
     8701 gcgagcctgg agtttgtacg taacgagtta ataccgttac aaaaaagaat gatggaaata
     8761 aataaattgg taagtgagaa cattgttaaa tttgatagtt ataaactagc tacttaacgt
     8821 aatcactaaa tgaggttctt taacacagct aaaaaattta ttaatagcca gcagttttta
     8881 tgaatttctt cagcgtgcag atacacgctg aagatgcaaa aaatcatatg agacgaccgt
     8941 ctggacttct gttacctaaa tgtaattcac agagtatcca cctaatcaca tcaggtcgaa
     9001 ttaacccagc tacaaaaacc gaattccaat tatttttacc tttatgtttt tcatccaaca
     9061 gcaacaactc gcgagtcaac aactcatata catcgctata agtagaaaga ctcttattca
     9121 gtcctctaat aacaagctca ggatataagt aaaacgactc ccattgttca gacaaatacc
     9181 ccttaatatt attcttgata acaacattat caagatgata cttaacattg ttatattctg
     9241 gtgacattgg gtcaattatg atttttacat caattgtagg tgttcgccct aatttagaaa
     9301 aattagcaca tattaatctt tgttttaata tattatcaaa atatggatgc agcatccgat
     9361 ggcctgcaga attagctata gtagtacttt tgaaagtatt acatttgcaa gcaggaacca
     9421 aattcttagt gaataaagaa aattctggat agttttcctt gggtaaaaca tgatccaaag
     9481 tcccgctatg cattgaacca cacattggac atagagagtt agaattagct gctcttatat
     9541 catcaattat agataaacac tttgcgggat tgttataata atatctcaaa gcttcagcaa
     9601 tattgttact caatacgcca caagaattga cattaagata ccctttattc tttatgtacg
     9661 atctatatgc attaagtata aatgtatcct gtccattcag aacagaatga tgttttaatc
     9721 tcttatttgc agatagtttt ttaaatgcag aataatcttt aaaaacaggt ctttttaatt
     9781 tattcatttc aattgcccat ttcatttctc aacgcagtta atacattaag tgataagtcc
     9841 tcgctatatt tagattcaac atcatcccaa gacatattct ttgcaattat attgtttttt
     9901 actttattta aaatttgagt tggttcactc tcaccgaaaa caaaatatga gatatttcct
     9961 atattcgccc caaaagtact caatctcggt ttttcgctaa caattacccc atcatctcgt
    10021 cttctgagta ttgtcacttg ctccttaaaa acctcccgaa caagataaac cgaatgcgtt
    10081 gctatgatag ctgaagagcc tgtcttttct aataaattat caagcaatgc cataaattta
    10141 ttaataaatg aaggatggag atgtgtttct ggctcatcta ttaatagaag agtcccattc
    10201 tcaatataca aacagacttg tacacaaaac ttaataaacg atatttcccc actactcaaa
    10261 gggtaacatt tattttcaat aagcctcaaa ggctcgccag agagaataat ttcagaatat
    10321 aatgatagtc tagattcttc gcctcgagaa ttaagctcat ttaatttaac aaatggtgaa
    10381 ttttcaccgc cacatttgat tactaaatcg ttgttactat ttagaacact cagtgcatca
    10441 acaaatatat tccacctttg attatagccg atagcgtcgt tactcctcgc tagttgcact
    10501 attaaatcat tcaagtttaa tttggatttt gattcacgat ttaaagtcaa tcttttgtac
    10561 catatcaatg attttattct tttatcggtt ggaaatgaac acttactttc atttgttgga
    10621 gaaaaagcaa tgagcctact aatttgaatt cgttcttcaa tgctcacacc gttagaatca
    10681 actacagcca ccaaattatc ctttccttta atcgcagcca atgcgatttc tctaagcgtt
    10741 tggctttttc ctacaccatt ctcgcctata attatggaaa ttctttttgg taaatcatgc
    10801 tcgtgatcaa aattaaaaac ataagataca tcttcttcat taactttatt cgaatagcta
    10861 atcttgatgt gctgtgataa attacccaac tcctcatatt gaataccgga aagaactgtt
    10921 cctgcatttt tgaaagtaaa atacgactca gactctctaa tgaaagattt attaaagata
    10981 tcagaagaga ttgctttttt cctcaaattc tctgcactag cgtcactttt cttagaaaca
    11041 acatcattaa tgaaatttaa tatatatttg gattcattca ccccaaaaaa tcttactagt
    11101 cttcgataat tattcatatc ctgaagcatg acaaaataat cattaaaccc ctcatccttt
    11161 aaattagatt cttccttttt cttcactcgc cttatcagtt ctgcttttcc atttcgttcc
    11221 tcctctgaat tcaaaaaacc aatataacca ttcagtgaaa ttatatcctt acactctttt
    11281 ttattaaaaa tagatatttc gactctactc aaatatccaa aatcattcca atcgcttctt
    11341 gatgggacta tttttatata attaccagaa tcagatatct gttgattatt tgtaattaaa
    11401 aaatataaac tataattttt atttttcttg actaacatta ttaccctctc acttcattag
    11461 tgatgattta ttttggaatt attttacaca cttataccta gcgcgcaatc gtatccccgc
    11521 cacgcctgcc cgctttatgt agaggttttc atgcacctgc atgatctacg caaaagcccg
    11581 ccagttctgg cgggccttag caaaaacgat cctcaaacga tcatgcgatc tcatgcggca
    11641 tagacatgca ctacagagct aacgcctcgc aagggctcgt tgttcaacct tgctgacgcc
    11701 agaagctagt tcagacgcca gcaacgtttc ttaatgcagc cagctgtcgt cttcccacac
    11761 cttctgcata attttcatca cttgttttct ttcttcgtcc agttgcaatc cagtaagttc
    11821 cacaccgtta gagctacctt tgcggatacg aattaccgtt ttgggataca gagggcgcag
    11881 attgcggtaa agctcggatt caagagcgtc cagggtagac tggctaatct tctgctcttt
    11941 atcgatcatt atttcaatgc gcataaaagt cacctcagct gatgacatcc attgagcggt
    12001 tgtattcgtg ggttctgatt tttgccatga gttcatcagt caattcagaa acccactgca
    12061 gagccagccc cttctcttca tcactacact cactagccgc tacaagctta agaaaaaaat
    12121 caatgcgctg gagcttcaaa gactccaaaa aatagtcctg catctttcct cctatgacac
    12181 cacacgcaat actgtatgca taaccactgt ttatatttac agcatataat aatcttactg
    12241 atgtaaaacg tttttttacg ttcatcagcc tgatatgcct ggtattatta agagcacgaa
    12301 ttgttaaccc gcgtaattaa tacaggttcc gccactgatc atcttcctgc aaacgctggt
    12361 tccgatagaa gatacgcagg cctgctcctg acggaatact gcctccgcga aggagtaaat
    12421 cgacctcttt ctcgctgcca tcaaatcctc tggacttcag ctcatacacg agctgcagtc
    12481 gctgatggtc tgtaattcgc tgtttgtagt ctttacgccg tttcggtttc accaggcgta
    12541 accttgctgc cagttcccgg cgctcttttt tgctcatact gtgcaggtaa tcgtgcaact
    12601 ccttgtcatc catgctggta atgtccgttc tggggttccc atcagctgat ttatctttct
    12661 cctgttggtt caaattttca gcaaggagac agttattgcc acgagtccaa ggggcgcaag
    12721 cgccctggtc ggctgccgcc tcctgaacgt caacggcttt acgaaccatt ttccacttca
    12781 ctgcatgagt gcagatcttg ccttctgcaa tgggtgacca gatgccataa atacgaatac
    12841 cgtgatcgcc ataggcggtc ggctcttcat tgatttcata agcggttctg atcaagtgat
    12901 atttgcgagg aaccagcacg ccgccctgcc tcataatgta ggtggcaaaa cagccagcat
    12961 cagcagcagc caggatggca tcaaggcgcg ggttatccag taccggcgca cctgcttttt
    13021 tgtcaccctg ctgccttgcc gcctgaccag ccaacaaccg cagttcacgg taagcctgac
    13081 gccctggaat accaaagaag cggaattgct gaacacgatg cagagacgcc cagggattaa
    13141 cgtattcagc gttatcacgc agggatttac ccgtttcctt gctgatctcg ccagccagac
    13201 cacgcccgtc aatgttctta ctgatgtatt tcgcgatgta gcttgtcggc gttcctttgc
    13261 gcgggtttat cagctcagat ttaaagcgtg gaccagtgtt attacccagt tcctcgcggt
    13321 cttcacggat ggcaaactta cgcaacaatg cagtaatggc gcggcggtct tttttgcgca
    13381 taaaacacaa caggtgccag tgaactgtac cgtcatgatg cggctcagcc acccgcacgc
    13441 cataccagcg caacccggct ttgtgcatcg ccttacgaaa tgcagcaaac atgccgacca
    13501 gataatcgct gctttgtctt accgtcgcat ttgtccaggt tgggtttggt ctgccgttat
    13561 tgagcgtgga atggaaacgt gacggacagg taatggtgta gaaaacggcg cagtcaccgc
    13621 gcatttccgc gataagctcc agacctttaa cacaggccat catctcattg cggcggtgcg
    13681 ccgggttgct gctgctggcg tttaccacgt cttccatatc cagcgtgtcg ccctcttcgt
    13741 tcaccagttc atgagaacgg aaaaactcca atgacttgcg gcgctgctca cgtttatgca
    13801 tcacggcttc atagctgaca tagggagatg cttttttgct gaccaggcag acagcacgca
    13861 actgctcttc ccgccattcg caacgcattt tccataattt ccggtaccac cagtcggcgc
    13921 acaacatacg cgccagcgaa cccggaatga gttcataggg cacgggttta cggcggtttc
    13981 ttttccgacg gagttgctca aacgcaggcg ggatgacatc cagacgcagg gtttccgctg
    14041 ccaccttttc ccatgtcttg cggatttctt ctggcttaac gtcatcggtg gcatacaaat
    14101 caccacaagc tgcatcaagg cacatgctca tatgcgcagc gacaagggta gacaggcgtt
    14161 tcacctgatc ctgactcatt tcaggcagaa tcagcaggcc gtccagccct acatggcttg
    14221 ccataaaacg aaaagatgca gatagctggc tgtcgcgtac atgctccagt cgttccagac
    14281 atggcttaat cgtctcacgt aaatagcggg aataagcctt tggcctgccc aggctgctga
    14341 agtattcaat acgttgcatc agcggcttgc tgatatggga aggctgggcg ttgacgtccg
    14401 ccagaatgac catatccgga ttaaaacgct gctgctcatg cgccagcttt gcccggctaa
    14461 tgagcttatc ctgctccatt tcgtgctgga caggatcacg tgattcataa aaaaaataac
    14521 gctcccagac ctgatcactc agtgcctcgc ggcgcaactg ttcctgctcg ttatcggcag
    14581 cgtacagagt gatcaggttt gaaagcgcag aaaccggcgc aacttccgcc gggtccagat
    14641 aagggttaat ggcctttttc gggctgttcc atgagaacgc tgcggcagcc tcgttaaagc
    14701 cgcagcagtt gttcatatcg gcatggctca tgcacgtact ccgtacacgg cagaactatc
    14761 cacgccacgc gaataatcaa atcccaccca gcagcgcggc ccggaaacag caatgatttc
    14821 tgttgctgat ttaccctcgc cagctgccac accgatgctg cgttttacct tgatatagtg
    14881 gtgagtaaaa ttgcgataca gcgaacggat cagggatgtg tcactgttag aaacaatgac
    14941 cggatgtcct tctgatgacc gatgttcaag aacggatgct aggtgatact ggtcatcttc
    15001 agtgaaacca tcagtgtgat agccggaaaa cgtaccgtca tacggtggat cgcaatacac
    15061 cacatccccc gccttcaaca tcgccagcgt ttcatcaaag ctggcgcaga taaacgttgc
    15121 tcgctgggct ttttctgcaa atgcgcgaat ttctttttca gggaaatacg gatttttata
    15181 attgccgtag ggaatgttga aatgcccgct cttgttatag cgacataaac cacggtaacc
    15241 gtgacgattg agatacagga aatataccgc tttcatgaaa tcagtaattt cagttgagta
    15301 attaaactcc tgccttatgt tgtaataagc cacctccctg tttgcgatct caaataaaac
    15361 tctgg
//
LOCUS       DADMIB010000098        15312 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.098, whole genome shotgun sequence.
ACCESSION   DADMIB010000098 DADMIB010000000
VERSION     DADMIB010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15312
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.098"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..321)
                     /locus_tag="JNZ89_002795"
     CDS             complement(<1..321)
                     /locus_tag="JNZ89_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707676.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HAY8936608.1"
                     /translation="MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVA
                     LKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGIN
                     GKWVR"
     gene            complement(326..511)
                     /locus_tag="JNZ89_002796"
     CDS             complement(326..511)
                     /locus_tag="JNZ89_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HAY8936609.1"
                     /translation="MKILLAALTSSFMLAACTPRIEVAAPKEPITINMNVKIEHEIII
                     KADKDVEELLETRSDLY"
     gene            complement(508..3147)
                     /locus_tag="JNZ89_002797"
     CDS             complement(508..3147)
                     /locus_tag="JNZ89_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH family protein"
                     /protein_id="HAY8936610.1"
                     /translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRI
                     ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKL
                     PQTEQSPAAPKTLAQWQSMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE
                     KVKFQGQLKGQQLTVSELDVIAFEYQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQ
                     EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLS
                     GRLGVKVDNWQAGLENALISGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTG
                     EAKQADLILYARLPAQLSGSLTDPTLAFEPGALLRSKGRVIDSLDIDEIRWPLAGVKV
                     TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW
                     DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPVVWVRDAQHPSFSGAL
                     SLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR
                     GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW
                     MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE
                     EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF
                     SGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS
                     RSSTNINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQA
                     WLEQNARLPGNDCPQGKECEEKQ"
     gene            3355..4344
                     /gene="ldhA"
                     /locus_tag="JNZ89_002798"
     CDS             3355..4344
                     /gene="ldhA"
                     /locus_tag="JNZ89_002798"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HAY8936611.1"
                     /translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG
                     CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP
                     EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML
                     RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPANYHLLNEA
                     AFDQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
                     QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV"
     gene            4455..4877
                     /gene="hslJ"
                     /locus_tag="JNZ89_002799"
     CDS             4455..4877
                     /gene="hslJ"
                     /locus_tag="JNZ89_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HslJ"
                     /protein_id="HAY8936612.1"
                     /translation="MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKP
                     VTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELD
                     NTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN"
     gene            complement(4874..5140)
                     /locus_tag="JNZ89_002800"
     CDS             complement(4874..5140)
                     /locus_tag="JNZ89_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015964583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HAY8936613.1"
                     /translation="MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEA
                     NCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY"
     gene            5414..8938
                     /gene="nifJ"
                     /locus_tag="JNZ89_002801"
     CDS             5414..8938
                     /gene="nifJ"
                     /locus_tag="JNZ89_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HAY8936614.1"
                     /translation="MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL
                     KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP
                     FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR
                     VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANP
                     DSYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAI
                     GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQTLPGSVRSVAVLDRTKEPGAQAE
                     PLYLDVMTALAEAFNNGKRETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARF
                     TVGIYDDVTNLSLPLPENTQPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
                     GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG
                     IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF
                     FHLTQILPGDSALAELQGAIAKSYSSKGQDLVEGNWQALALARESVEEVPLQPVNPHS
                     ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP
                     IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV
                     APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKL
                     ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
                     STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT
                     ALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG
                     GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
                     MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL
                     TATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQPEVAEQL
                     WKDAAADLQKRYDFLAQMAGKAEKSNTD"
     gene            9304..10437
                     /gene="ompN"
                     /locus_tag="JNZ89_002802"
     CDS             9304..10437
                     /gene="ompN"
                     /locus_tag="JNZ89_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpN"
                     /protein_id="HAY8936615.1"
                     /translation="MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGL
                     KFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
                     GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGFSTTYDLGMGFSAGAAY
                     TSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVAN
                     KTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVDDKDLVKYADVGATY
                     YFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF"
     gene            10578..11012
                     /gene="uspF"
                     /locus_tag="JNZ89_002803"
     CDS             10578..11012
                     /gene="uspF"
                     /locus_tag="JNZ89_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310024.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspF"
                     /protein_id="HAY8936616.1"
                     /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSL
                     PYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEL
                     AKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR"
     gene            11593..12483
                     /gene="sitA"
                     /locus_tag="JNZ89_002804"
     CDS             11593..12483
                     /gene="sitA"
                     /locus_tag="JNZ89_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707262.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter substrate-binding
                     protein SitA"
                     /protein_id="HAY8936617.1"
                     /translation="MLLGCLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAE
                     VSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSS
                     GVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQRNADTYKA
                     KITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQV
                     RKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYID
                     LLKVTTSTLVQGIKAGKREK"
     gene            12483..13310
                     /gene="sitB"
                     /locus_tag="JNZ89_002805"
     CDS             12483..13310
                     /gene="sitB"
                     /locus_tag="JNZ89_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter ATP-binding
                     protein SitB"
                     /protein_id="HAY8936618.1"
                     /translation="MMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGS
                     GKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVM
                     MGRYGYMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQ
                     GDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGT
                     VLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREAR"
     gene            13307..14164
                     /gene="sitC"
                     /locus_tag="JNZ89_002806"
     CDS             13307..14164
                     /gene="sitC"
                     /locus_tag="JNZ89_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitC"
                     /protein_id="HAY8936619.1"
                     /translation="MNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
                     ALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSMLFLNQRTRLKEDAIIGLIFSSFF
                     GLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFF
                     DENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
                     RLLIIAVTIGSVTSFLGAWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRR
                     AHKALEDRS"
     gene            14161..15018
                     /gene="sitD"
                     /locus_tag="JNZ89_002807"
     CDS             14161..15018
                     /gene="sitD"
                     /locus_tag="JNZ89_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitD"
                     /protein_id="HAY8936620.1"
                     /translation="MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMG
                     DAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGM
                     FAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS
                     FDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRF
                     HIALLLATGISVIVSMTGVWLSFFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNA
                     HTQDLLSPN"
BASE COUNT         3846 a         3851 c         3704 g         3911 t
ORIGIN      
        1 tcgtacccat ttaccgttta tcccttgtac atattccccc ggtttggccc gagctacgag
       61 cttttgcccg gcgagtttcg cgatatcatc tacagacaca ttattttgct ttgccagttg
      121 ttggtaactc gctttacgtt cggcattaat gtcggttact aatttctctg tttcagcatc
      181 cgttttcagc gcaaccagat aaccataaaa tgtttccccg acccgcccct gcgttctggc
      241 ttcatccaga gtcaatgcca ttacattgct gcttaccagc ccaacaagaa acgcacaaag
      301 aagtaatgtt ttcttcatca tcgcctcagt aaagatcgct acgagtttca agcagctctt
      361 cgacatcttt gtctgccttg atgatgatct catgctcaat tttaacgttc atattgatag
      421 tgatcggttc cttgggcgca gcgacttcaa tacgcggcgt acaggcagcc agcataaaag
      481 atgacgtcaa cgcagccagt aaaattttca ttgtttttcc tcacactctt ttccttgcgg
      541 acagtcattt cccggcagac gtgcgttctg ctccaaccat gcctggagat tatcgccaaa
      601 gcgtaaactg cgccacagcg taaaaatatt ctcttcatga tggtaattaa ggtttaccgt
      661 accgctttta ccatcaacgc gactggtacc tgtaatgttg gcctgcatgg ttaataaacc
      721 gagattatct aaattaatat ttgtcgatga acggctaatt tccatatagc gcaaccagtt
      781 aattgctgaa cccgcagtca tattgtcttt caccaccgca tctgcggtgt ctttatccag
      841 ccgcaaggtc attggcccgc tatttgccag ccaaccatct ttcactatcc atttttcgtt
      901 gtttagccat aacggcaatg caccactaaa tgccccggac atggcgaatt gtttcggatt
      961 gacggcgcta accagttcgc tggatgagag attattcagc cgcaacagcg ccgggtcatg
     1021 ttgcggcata cgtaattgtt tcatcagtac gttaccgcct aacacatcga cgctaacatc
     1081 agtcaacagc aagggttctt cttcagtcca cggataacgc ccttgcaaat cagccgtaat
     1141 atttttcgct gtcaccagat taatcacttc ggcaattcgc aacgtaacgg ggccgcgagt
     1201 ccccagatgc caggctccat cggcaaaacg gaaaggcagg acaaaatcga caccgttaac
     1261 ctgattatct ggcatccagg cactaccgcc tttcaacacg ccgtgccctc ccgcgcggaa
     1321 tccttgttca ggcgcagcag aaaatgcaac ctgagcatac agttcaccat cgcgtaagtt
     1381 catcttccag tcgggtggca ccagcggctg gaatacagtc agtgattgtt ttggccacca
     1441 ggcgttaccg cgcagacgaa taccgtccca gcgaccattt acccgaaccg ggccaatctc
     1501 accagcatgt aaatcgcctt taaagaggaa atacgtcgga tcgcgcccat cgacgctaaa
     1561 ttttaaggtt gatggcggta acacactgcc gccagtgaac agcgtttgcc cggcgtccag
     1621 tgacagcgcg ccgctgaagg agggatgctg tgcgtcacgt acccagacga cgggcttgtc
     1681 cagaattaat cgcggctttt ctaccgtcat cgtaccgtat tgtaactggt cgaaaccggt
     1741 ggagaggtcg gtcagcgtaa tcgtgctgtc atgccattca ccttttcctg cgacatccca
     1801 ggtggcattc atcggtgtaa aactgccttt tccccagtag cgccactgcc agcggcccgc
     1861 gtcagggaga aaatcattcg ccagcccatc catatgcagc acgaaatcgc ccagttcatt
     1921 ttcatgcgcc tgcaaaatgg cctgcaaacg tccgtcaaca ccacgttggg tgacttttac
     1981 acccgctaaa ggccagcgga tttcatcgat gtccagcgaa tcgatgactc ttccctttga
     2041 acgaagtaac gcgcctggct caaaggccag cgttgggtca gtcagacttc cacttagctg
     2101 cgcgggtaag cgggcatata aaatgaggtc cgcctgtttc gcttcaccgg tcagctgcag
     2161 aggcagctgg ctgttatcca tgcttaattt tcctgggcca aaatttagca ccgcgttgcc
     2221 tttacccgct tgcccctggg tcagcacact cagtcgtccg ctgatcagag cgttctcaag
     2281 ccctgcctgc cagttgtcga ctttgacacc cagtcggcca ctcaaaggaa aacctgcata
     2341 cggccaactc cagcgaccat cgcttacggt caattgttga cgagtaattt gccacggcaa
     2401 atcgagcaac ggatcgccgt tatcacgtgc cagcacaatc aattgcccgc tattttcctg
     2461 ccagtccagc tctgcatcca ccagtgacgg ttcctgcggc aagtttaacg tcgcagtagc
     2521 atgcccactt acaggaagtc catccggcac gagcggcata gtaaattccc ccaccagttt
     2581 aaccggcggc tgatattcaa acgcgatgac atccagttcg ctgactgtaa gttgttgccc
     2641 tttcagctgg ccttgaaatt taactttttc gccctgataa cgcagttgct ggatatcaga
     2701 ggttaatgcg agagagagtt ttccctgcca ttcctgccag ggagaaaaaa tcagtttatc
     2761 gatattgatc caggtgttag gcagcatgga ctgccactgc gcgagggttt ttggagcagc
     2821 tggcgattgc tccgtctgcg gcaatttcgc cagacaagca gaatcaagtt ctaccgtgcc
     2881 gacgttcaat aaccagcggc tgggatgtga aaggctggcg ttggtgatat gcgcaagctg
     2941 acaatctccc accagataac ggagatcggg aatgattaaa cctttacgcg taatgcgtgg
     3001 gctttcatct aatgcaatac gtgtcccgag cggtagccag atgcccgcca gcgtgggaac
     3061 ccacagcccg agcgtcatca gcagcgtcaa cggcacaaga ataatcagta ataacagcgc
     3121 gagaacggct ttatatttac ccagcatggg tagttaatat cctgatttag cgaaaaatta
     3181 agcattcaat acgggtattg tggcatgttt aaccgttcag ttgaaggttg cgcctacact
     3241 aagcatagtt gttgatgaat ttttcaatat cgccatggtt ttcaattata tttgaaattt
     3301 tgtaaaatat ttttagtggc ttaaatgtga ttcaacatca ctggagaaag tcttatgaaa
     3361 ctcgccgttt atagcacaaa acagtacgac aagaagtacc tgcaacaggt gaacgagtcc
     3421 tttggctttg agctggaatt ttttgacttt ctgctgacgg aaaaaaccgc taaaactgcc
     3481 aatggctgcg aagcggtatg tattttcgta aacgatgacg gcagccgccc ggtgctggaa
     3541 gagctgaaaa agcacggcgt taaatatatc gccctgcgct gtgccggttt caataacgtc
     3601 gaccttgatg cggcaaaaga actggggctg aaagtagtcc gtgttccagc ctatgatcca
     3661 gaggccgttg ctgaacacgc catcggtatg atgatgacgc tgaaccgccg tattcaccgc
     3721 gcgtatcagc gtacccgtga cgctaacttc tctctggaag gtctgaccgg ctttactatg
     3781 tatggcaaaa cggcaggcgt tatcggtacc ggtaaaatcg gtgtggcgat gctgcgtatt
     3841 ctgaaaggtt ttggtatgcg tctgctggcg ttcgatccgt atccaagtgc agcggcgctg
     3901 gaactcggtg tggagtatgt cgatctgcca accctgttct ctgaatcaga cgttatctct
     3961 ctgcactgcc cgctgacacc ggcaaactac catctgttga acgaagccgc cttcgatcag
     4021 atgaaaaatg gcgtgatgat cgtcaatacc agtcgcggtg cattgattga ttctcaggca
     4081 gcaattgaag cgctgaaaaa tcagaaaatt ggttcgttgg gtatggacgt gtatgagaac
     4141 gaacgcgatc tgttctttga agataaatcc aacgacgtga tccaggatga cgtattccgt
     4201 cgcctgtctg cctgccacaa cgtgctgttt accgggcacc aggcattcct gacagcagaa
     4261 gctctgacca gtatttctca gactacgctg caaaacttaa gcaatctgga aaaaggcgaa
     4321 acctgcccga acgaactggt ttaatgttgc agctcccctg caatccaggg gagctgattc
     4381 agataatccc caatgacctt tcattctcta ttcttaaaat agtcctgagt cagaaactgt
     4441 aattgagaac cacaatgaag aaagtagccg cgtttgttgc gctaagcctg ctgatggcgg
     4501 gatgtgtaag taatgacaaa attgctgtta cgccagaaca gctacagcat catcgctttg
     4561 tgctggaaag cgtaaacggt aagcccgtga ccagcgataa aaatccgcca gaaatcagtt
     4621 ttggtgaaaa aatgatgatt tccggcagca tgtgtaaccg ctttagcggt gaaggcaaac
     4681 tgtctaatgg tgaactgaca gccaaagggc tggcaatgac ccgtatgatg tgcgctaacc
     4741 cgcagcttaa tgaactcgat aacaccatta gcgaaatgct gaaagaaggt gcacaagtgg
     4801 atctgaccgc gaaccagtta acgctggcga ccgcgaaaca gacattaact tataagctgg
     4861 cggatttaat gaattaatag ctgccacagc tcccggcggc aagtgactgt tcgctacagc
     4921 gtttgccgtt gggtaatgca cacatcccaa tcgccgtgcc atccagttga cgggcaacag
     4981 aaagcgaacc gccgatcatt gcacaatttg cttctccact actggacatc gacgctttta
     5041 aacctggcgc tacgtgcgcc gcagtcgcct gctgaacagg ttcactacta cacgccgaca
     5101 acaataaagc ggcacaccct acccaaaacg ctgctcgcat cttttcttcc tctgatcttc
     5161 aagccaaacg acaccgccat aaataatagg cagcacagag ggcgacatcg agagctgtcc
     5221 tgcgcgttgc cccgcatttt tactttttta tggctatttt tttgccctct gtttgatcaa
     5281 aacattcatt acgctgatgt gggggacaca aaagcgaaaa tgcagaagaa agccatttgc
     5341 taaaattgaa agattactac tgggcgcgca gcaatttcgt gcgcccctca tttgcgcaat
     5401 gtaagggtgt catatgatta ctattgacgg taatggcgcg gttgcttcgg tggcgtttcg
     5461 caccagtgaa gttatcgcca tctaccctat tacccccagt tccacgatgg cagaacaggc
     5521 tgatgcctgg gccggaaacg gcttgaagaa cgtttgggga gacacaccac gcgtggttga
     5581 aatgcagtcg gaagcgggtg ctatcgctac cgtgcatggc gctttgcaga cgggtgccct
     5641 ttcaacatcg tttacgtcat cgcagggttt gctgctgatg atcccgacac tgtacaaact
     5701 ggcaggcgaa ctcacaccgt ttgtcctgca tgtagcggca cgtaccgttg ccacacatgc
     5761 actctctatt tttggcgatc attccgacgt catggcggtg cgccagacgg gttgcgcgat
     5821 gttgtgtgcg gcaaacgtcc aggaagcgca agactttgct ctcatttcgc acatcgcgac
     5881 gctgaaaagc cgcgtgccat ttattcattt ctttgatggt ttccgcacgt cccacgaaat
     5941 caataaaatt gtcccgctgg ccgatgacac gattcttgat ctcatgccgc aggccgaaat
     6001 tgatgctcat cgcgcccggg cgctcaaccc ggaacatccg gtgatccgtg gtacgtccgc
     6061 caatcctgac tcttatttcc agtctcgcga agccaccaac ccctggtaca acgcagtcta
     6121 tgaccatgtt gaacaggcga tgaatgattt ctctgccgcg acaggtcgtc agtatcagcc
     6181 gtttgaatat tacgggcatc cgcaagctga acgggtgatt atcctgatgg gctcagccat
     6241 tggcacctgt gaagaagtgg ttgatgaatt gctaacccgt ggcgaaaaag tcggcgtgct
     6301 gaaagttcgc ctgtaccgcc ccttctcagc caaacacttg ctacaaactc taccgggatc
     6361 cgtacgcagc gtggcggtac tggacagaac caaagaaccc ggtgcccagg cagaaccgct
     6421 ctatctggat gtgatgaccg cactggcaga agcctttaat aatggcaagc gcgaaactct
     6481 gccccgtgtc attggtgggc gctatggtct ttcatccaaa gaatttggcc cggactgtgt
     6541 actggcggta tttgccgagc tcaacgcggc taaaccgaaa gcgcgcttta cggttggtat
     6601 ttacgatgat gtaaccaatc tgtccctgcc gttgccggaa aacacccagc caaactcggc
     6661 gaaacttgaa gccttgtttt atggccttgg tagtgatggc agcgtttccg cgaccaaaaa
     6721 caatatcaag attatcggta attccacgcc gtggtacgca cagggctatt ttgtttacga
     6781 ctccaaaaaa gcgggcggcc tgacggtttc tcaccttcgc gtgagcgaac agccgattcg
     6841 ttccgcttat ctcatttccc aggctgattt tgttggctgc caccagttgc agtttatcga
     6901 taaatatcag atggctgagc gtttaaaacc tggcggcatt ttcctgctca acacgccgta
     6961 cagcgcagat gaagtgtggt cgcgcttgcc gcaagaagtt caggccgtgt taaaccagaa
     7021 aaaagcgcgc ttctatgtga ttaacgcggc gaaaatcgcc cgcgaatgtg gcctggcggc
     7081 ccgtattaat accgtcatgc agatggcttt tttccatctg acgcaaattc tgcctggcga
     7141 tagcgccctc gcagaattgc agggtgcgat tgccaaaagt tacagtagca aaggccagga
     7201 tctggtggaa ggcaactggc aggctctggc gctggcgcgt gaatccgtag aagaagttcc
     7261 gttgcaaccg gtaaatccgc acagcgccaa tcgaccgcca gtggtttccg atgccgcccc
     7321 tgatttcgtg aaaaccgtaa ccgcagcgat gctcgcaggg cttggtgatg ccctccccgt
     7381 ttcggcgctg ccgccagacg gcacctggcc gatggggacc actcgctggg aaaaacgcaa
     7441 tatcgccgaa gagatcccca tctggaaaga ggaactctgt acccaatgta accactgcgt
     7501 cgccgcttgc ccacactcag ctattcgcgc aaaagtggta ccacccgaag cgatggaaaa
     7561 cgcccctgcc agcctgcatt cgctggatgt gaaatcgcgt gatatgcgcg ggcagaaata
     7621 tgtcttgcag gtggctccgg aagattgcac cggttgtaac ctgtgcgtcg aagtttgccc
     7681 ggcgaaagac cgtcagaatc cagagattaa agccatcaat atgatgtcgc gcctggaaca
     7741 tgtcgaagaa gagaaaatca attacgattt cttcctcaac ctgccagaaa tcgaccgtag
     7801 caaactggaa cgtattgata ttcgtacatc gcagctgatt acaccgctgt ttgaatattc
     7861 cggtgcttgc tccggttgtg gcgagacgcc gtatattaaa ttgctgactc agctctatgg
     7921 cgaccggatg ttgatcgcta acgccaccgg ctgttcttca atttatggcg gtaacctgcc
     7981 ctctacaccg tataccaccg atgccaacgg tcgtgggccg gcatgggcga actctctatt
     8041 tgaagataat gccgaatttg gccttggttt ccgcctgacg gtcgatcaac accgtgtccg
     8101 cgtgctgcgt ctgctggatc aatttgccga taaaatcccg gcggaattac tgacggcgtt
     8161 gaaatcagac gctacgccag aggttcgtcg agaacaggtc gcagctttac gccagcaact
     8221 caacgatgtt gccgaagcac atgaactgct acgtgatgca gatgcactgg tggaaaaatc
     8281 aatctggctg attggtggtg atggctgggc ttacgatatc ggctttggcg gtctggatca
     8341 tgtattgagt ttgacggaaa acgtcaacat tctggtgctg gatacgcaat gctattccaa
     8401 caccggtggt caggcgtcga aagcgacacc gctgggtgca gtaactaaat ttggcgagca
     8461 cggcaaacgt aaagcgcgta aagatcttgg cgtcagtatg atgatgtacg gtcatgttta
     8521 tgtggcgcag atttctctcg gcgcgcagct gaatcagacg gtgaaagcga ttcaggaagc
     8581 ggaagcgtat ccgggaccat cgctgatcat tgcttatagc ccgtgtgaag agcatggtta
     8641 cgatctggca ctcagccatg accagatgcg ccaactcaca gctaccggct tctggccgct
     8701 atatcgcttc gatcctcgtc gtgccgatga aggcaaactg ccgctggcgc tggattcacg
     8761 cccgccgtca gaagcactgg aagaaacgtt acttcacgag caacgtttcc gtcgtctgaa
     8821 ttcgcagcag ccagaagtgg cagaacagtt atggaaagat gctgcagctg atttgcaaaa
     8881 acgctatgac ttcctggcac aaatggccgg aaaagcggaa aaaagcaaca ccgattaaat
     8941 gctctggata aggattatcc aattctaaaa aaaagcccgg acgactgttc gggcttgtct
     9001 ttttatatgt tggaaaatca gtggcaatgc aatggcccaa cagaaaataa aatctgtgac
     9061 aataaaggca tataacccgc gcagaataac gtatagaaaa ttaaaagtat aatttttatt
     9121 ttgtatgtat tatcttcgat acattcacca gacttattat catttcagaa gaattatttg
     9181 attaaggttt tacttaaggc gtaacaaatg atatttatcg gctaactgaa cttctccttt
     9241 aggatgtttt cactccccgg aatggggata aaaggcaaat aaaataacta aaggatttat
     9301 tcaatgaaaa gcaaagtact ggcactttta attcctgccc tgctcgccgc aggtgctgca
     9361 catgcagccg aagtttataa taaagacggc aacaaattag atctgtatgg caaagttgat
     9421 ggcctgcatt atttttctga taattcagcg aaagatggcg atcagagcta tgcgcgtctg
     9481 ggttttaaag gcgaaaccca aattaacgat caactcactg gctacggtca atgggaatac
     9541 aatattcaag caaacaacac tgaatcttca aaaaaccagt catggacccg tctggcattt
     9601 gccgggctga aatttgcaga ttacggttct ttcgattacg gacgtaatta tggcgtaatg
     9661 tacgacatcg aaggctggac cgatatgctg cctgaatttg gcggtgactc ttataccaat
     9721 gcagacaact ttatgactgg tcgagccaat ggcgtcgcga cttatcgtaa tactgatttc
     9781 ttcggtctgg taaatggtct gaacttcgcg gtgcagtatc aaggtaacaa cgaaggagcc
     9841 agtaatggtc aggaaggcac caacaacgga cgtgatgttc gccatgaaaa cggtgacggc
     9901 tggggttttt ccacaacata tgatttaggc atgggcttta gcgctggtgc ggcatacacc
     9961 tcttctgacc gcaccaatga ccaggttaac catactgcgg cgggtggtga taaagcagac
    10021 gcgtggactg ctgggctaaa atacgatgct aacaatattt acctagcaac catgtattca
    10081 gaaacgcgta atatgacccc gtttggcgac agcgattatg ctgtggcaaa caaaacccag
    10141 aattttgaag tcactgccca gtaccagttt gattttggtc tgcgtccggc agtctctttc
    10201 ctgatgtcta aaggccgtga cctgcacgct gccggtggtg cagacaaccc ggcaggtgtt
    10261 gatgataaag atctggttaa atacgccgat gttggcgcga cttactattt caataaaaac
    10321 atgtccacct acgttgacta taaaatcaac ctgttggatg aagatgacag cttctacgct
    10381 gccaatggca tctctaccga tgatattgtc gctttaggtc tggtttatca gttctaaatc
    10441 ctcctgcccg ctgttatggc gggctttttc tgcttattct tcctcctttg atctaaatta
    10501 aaaatgtgaa ctccatcatt acacaaaaag tgtcatctgg cgttacactt tatgcggata
    10561 ctaaaacagg aggttttatg aacagaacga ttcttgtccc tatcgatatt tccgattcag
    10621 aattaactca acgcgtgatt agccacgttg aggcagaggc aaagattgac gatgcagagg
    10681 ttcatttcct gacggtaata ccttcactgc cctactatgc ctctctgggt ttagcgtatt
    10741 ccgcagaatt accggcaatg gatgacctga aagcggaagc caaatcgcaa ctggaagaga
    10801 tcattaaaaa atttaaactg ccaaccgaca gagtgcatgt ccatgttgag gaaggctcgc
    10861 ccaaagaccg cattctggaa ttggcgaaga agatccccgc tcatatgatc atcattgctt
    10921 cccatcgacc ggatatcacc acttatctgc tcggttccaa cgccgcagct gtagtgcgtc
    10981 acgcagagtg ctccgtgctg gttgtgcgct gacactaacg cccgcacatt gctgcgggct
    11041 ttttgattca tttcgcaaat gtgctgacat tttcccctct aatccgtacc atacacgcca
    11101 ctgtttttat atcagatttc ttatgctggg cattccggca tgacgcatac tcttctgatg
    11161 ccatataacg aattgagtcg cttttaaatg tcgcaaaatc aagaaattag taagaaagaa
    11221 caatacaacc tgaacaagta agggcaaaaa tcacaactat ctgactcata agtattttat
    11281 ttatttttca atatgttaaa cattatcagc gacaacaata agctacgata acccactctt
    11341 tttttgcccc atttttgcca tcaacaattt tcctcataaa gtcatttcaa agcctaatag
    11401 ctgctctact tttttcctca atatcatgtc gccagcagga aacaacctaa tccctgtttt
    11461 aggcctcaaa gctgttaatg ataattattt tcattttgta taggttatgc tataaaacat
    11521 agccgttgct atgtttgttc taattttgct cactataggt actaaattat gcactcaata
    11581 aaaaaagtaa ccatgctctt ggggtgcctc gccctcacct gctcgatcgc atttcaggca
    11641 agtgcaactg aaaaattcaa ggtcattaca acatttacca tcatcgcgga tatggccaaa
    11701 aacgtggctg gagatgctgc agaagtctca tccataacca agcctggtgc agaaattcat
    11761 gagtatcagc ctacccctgg cgatattaaa cgtgcacagg gggcacaact gattctcgcc
    11821 aatggtatga atctggaatt gtggttccaa cgcttttacc agcatctcaa tggggttcca
    11881 gaagtaattg tctcttcggg tgtgacgcca gtagggatca ccgaaggacc ctatgagggc
    11941 aaacctaatc cccatgcatg gatgtcgcca gataatgctc tgatttacgt cgataatatt
    12001 cgtgatgcgt tgataaaata cgatccggca aatgcacaaa cctaccaacg taatgccgat
    12061 acttataaag ccaagattac ccaaaccctt gcccccctgc gtaagcagat tacggaactc
    12121 cctgagaatc agcgatggat ggtcaccagt gaaggggctt tttcttatct cgcacgcgat
    12181 ttggggctaa aagagcttta tctgtggccg attaatgccg atcaacaagg aacaccgcag
    12241 caggtacgta aggttgttga tatagttaag aaaaatcata tcccggcagt ctttagcgag
    12301 agtacgattt ccgataaacc agcgcgtcag gttgcgcgtg aaaccggcgc acactacggc
    12361 ggtgtgctct atgtcgattc cctgagcaca gaaaacggcc cggtacctac gtatatcgac
    12421 cttcttaagg ttactaccag tacgctggta cagggaatta aagccgggaa aagggagaaa
    12481 taatgatgca atctgcaggc attgtcgtta atgatgttac tgtcacctgg cgtaacgggc
    12541 acacagcact gcgcgatgca tccttcacag taccaagtgg atctattgcc gctctggttg
    12601 gggtaaacgg ttccggaaaa tcgacgttgt ttaaagcgat tatgggattt gtgcgtctga
    12661 ccagcggaaa gatatctgtt ctgggtattc ccacgcgaca ggcgctacag aaaaacctgg
    12721 ttgcctacgt ccctcagtca gaagaggttg actggtcatt tcctgtactg gtggaagatg
    12781 tggtgatgat gggccgctat gggtatatgg gtatgttgcg tatagccaaa aagagggatc
    12841 gtcagattgt caccgatgcg ctggaacgtg tcgatatggt ggattttcgc catcgtcaaa
    12901 tcggcgagct ttccggtgga caaaagaaac gcgtctttct ggcgagagcg attgcacagc
    12961 agggtgatgt gatcctgctg gatgaacctt ttaccggcgt tgatgtgaaa accgaagcga
    13021 aaatcatcag cctgttgagg gagttacgcg cggaaggcaa aacgatgctt gtctcaacgc
    13081 acaatctcgg ctcagtcacg acattttgcg attatacggt catggtcaaa ggcaccgtcc
    13141 tggcaagcgg gccgacagac accactttta cagccgagaa cctggagctg gcttttagcg
    13201 gcgtactgcg ccatgtcaca cttaacggct cggaagaaag cattattact gacgatgaac
    13261 gcccttttgt ggcacatcga ccgtcagcgg tgcagaggga agcaagatga acgtgctact
    13321 ggaacccttc agctatgaat atatgctcaa tgcgatgtgg gtctcggcaa tggtcggcgg
    13381 tctctgcgct ttcctgtcat gctatctgat gctaaaaggc tggtcgctga ttggcgatgc
    13441 gctgtcgcac tctattgtcc cgggtgttgc gggggcatat atgctggggc ttccgttttc
    13501 tctgggagcc ttcttttccg gcggactggc agcgggcagc atgctgtttc ttaaccaacg
    13561 cacccgctta aaagaagatg ccatcatcgg cctgatcttc tcgtcctttt ttggcctggg
    13621 gctgtttatg gtgtcattga acccgacatc cgtgaacatt cagaccatcg tcctgggcaa
    13681 tattctggca atcgatccgg cggatatcct gcaactcact atcattggca ttctctcgat
    13741 catcgtgctt tttttcaaat ggaaagatct tatggtgacc tttttcgacg agaatcacgc
    13801 ccgtgctatt ggattacatc cgggcagatt aaaaatcctc ttcttcaccc tgctgtcggt
    13861 ttcgaccgtt gcggcgctgc aaacggttgg tgcctttctg gtgatctgtc tggtggtgac
    13921 tcccggtgca acagcatggt tgttaaccga tcgttttccc cgcctgctca taattgctgt
    13981 aactattggc agtgtaacca gtttcctcgg cgcgtgggtc agttactttc tggacggcgc
    14041 gacaggtgga atcatcgtgg tggcgcagac actgctgttt cttttagcat ttgtatttgc
    14101 gcccacccat ggacttttgg caaatcgtcg gcgtgcgcat aaagcgctgg aggatcgctc
    14161 atgatggcat tattactgga gccactgcag ttcaccttta tgagtcacgc actgctgatt
    14221 tcactggtag tttccatacc ctgtgcgctg ctgtcggtct ttctggtcct gaaaggttgg
    14281 gcactgatgg gtgacgcgat gagtcatgcg gtttttcctg gcatcgtgct tacctggatt
    14341 ctggggttac ctctggctac aggggcattc gtcgccggag tattctgcgc ggtggcgacg
    14401 ggatacctga aagacaacag ccgaatcaag caagatacag ttatggggat tgttttttct
    14461 ggcatgtttg ccgcaggtct gatcttgtat attgcaatca aaccagacgt acatcttgac
    14521 catattcttt tcggcgacat gctcgggata accatcggcg atataatcca gacggtgatt
    14581 attgccgggc tggttacact tgttattagc gtaaaatggc gggatttttt gctgttcagc
    14641 tttgattatc aacaggcgca ggtaagcggt ttgcatacga gatggctgca ttatgggctg
    14701 ctgtgcatgg tttccctgac cattgtggcg acgctgaaag cagtaggtat cattctctct
    14761 atttctctgc tcattgcgcc tggcgccatt gcagtactcc tgacacaacg ctttcatatt
    14821 gcgctcctac tggcgactgg catatcggta atagtgtcaa tgactggtgt ctggctgtcc
    14881 ttttttatcg acagcgcacc agctccgacg attgtcgtct tattcgcggt cgtgttcatc
    14941 atgacgttta ccgttaccag catcaacgca cgcacaaagg gaaacgccca tacacaggat
    15001 ctgttatcac ccaattagca caatatccga ggacagcatc gtccgccagc gtccgccagc
    15061 ctacagaagt tcggaaagcc atggaaggtc gttgggagga ggtacgaatt ctatcatgca
    15121 aaaaatacgt aaaatcgata acgcctagaa atcattcaat actcgcacta tcgaaagttt
    15181 accagccaac cgcggcacgt tcctgcatac gacgtgccgc agcttctgtt attccacgat
    15241 aaaattccta accgaattca aatccttcag actattcagc tcttccttca gctcccgctg
    15301 acggcgataa at
//
LOCUS       DADMIB010000099        14939 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.099, whole genome shotgun sequence.
ACCESSION   DADMIB010000099 DADMIB010000000
VERSION     DADMIB010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14939)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14939)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14939
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.099"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..453
                     /locus_tag="JNZ89_002808"
     CDS             <1..453
                     /locus_tag="JNZ89_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312811.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HAY8936621.1"
                     /translation="LQEVNAALFKEYLPLLQQSEPTIKQPVRWKNALGELNANLDISI
                     ADPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKRADKQISGMM
                     TLGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH"
     gene            complement(494..1426)
                     /locus_tag="JNZ89_002809"
     CDS             complement(494..1426)
                     /locus_tag="JNZ89_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY8936622.1"
                     /translation="MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVK
                     LLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICN
                     HRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRH
                     PERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIA
                     MALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYIN
                     DKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQDK"
     gene            complement(1546..1788)
                     /locus_tag="JNZ89_002810"
     CDS             complement(1546..1788)
                     /locus_tag="JNZ89_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936623.1"
                     /translation="MSVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDN
                     FVHKLFTSLLIYYHAFYSMMFVFVFHVVKNKAIPNN"
     gene            1790..4576
                     /gene="polA"
                     /locus_tag="JNZ89_002811"
     CDS             1790..4576
                     /gene="polA"
                     /locus_tag="JNZ89_002811"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HAY8936624.1"
                     /translation="MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
                     MLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAM
                     GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL
                     GPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
                     EKIAGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELL
                     GLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL
                     DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA
                     PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN
                     SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNPLTFNQIALEEAGRYAAEDADVTLQL
                     HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL
                     EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
                     KVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYHQAVTATGRLSSTDPNLQNIPVR
                     NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
                     VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV
                     LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII
                     KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL
                     LVEVGSGENWDQAH"
     gene            complement(4958..5590)
                     /locus_tag="JNZ89_002812"
     CDS             complement(4958..5590)
                     /locus_tag="JNZ89_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HAY8936625.1"
                     /translation="MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALN
                     TLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEY
                     LEKRHSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLN
                     MVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE"
     gene            6172..6681
                     /gene="yihI"
                     /locus_tag="JNZ89_002813"
     CDS             6172..6681
                     /gene="yihI"
                     /locus_tag="JNZ89_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HAY8936626.1"
                     /translation="MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGS
                     RAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELL
                     ETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
                     DMMRLLRGN"
     gene            6870..8243
                     /gene="hemN"
                     /locus_tag="JNZ89_002814"
     CDS             6870..8243
                     /gene="hemN"
                     /locus_tag="JNZ89_002814"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HAY8936627.1"
                     /translation="MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQA
                     VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAG
                     RHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLR
                     AEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT
                     PESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAF
                     LTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD
                     CYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQW
                     DLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARM
                     QQFSRVI"
     gene            complement(8433..8543)
                     /gene="yshB"
                     /locus_tag="JNZ89_002815"
     CDS             complement(8433..8543)
                     /gene="yshB"
                     /locus_tag="JNZ89_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YshB family small membrane protein"
                     /protein_id="HAY8936628.1"
                     /translation="MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS"
     gene            complement(8654..10063)
                     /gene="glnG"
                     /locus_tag="JNZ89_002816"
     CDS             complement(8654..10063)
                     /gene="glnG"
                     /locus_tag="JNZ89_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HAY8936629.1"
                     /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALA
                     SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
                     PKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
                     SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFT
                     GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
                     IAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG
                     VEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAE
                     STSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
                     LLGWGRNTLTRKLKELGME"
     gene            complement(10075..11124)
                     /gene="glnL"
                     /locus_tag="JNZ89_002817"
     CDS             complement(10075..11124)
                     /gene="glnL"
                     /locus_tag="JNZ89_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HAY8936630.1"
                     /translation="MATGTQPDAGQILNSLINSILLIDDNLEIHYANPAAQQLLAQSS
                     RKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG
                     MILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALP
                     DPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNV
                     RLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGER
                     YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTS
                     WPGHTEFSVYLPIRK"
     gene            complement(11298..12707)
                     /gene="glnA"
                     /locus_tag="JNZ89_002818"
     CDS             complement(11298..12707)
                     /gene="glnA"
                     /locus_tag="JNZ89_002818"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--ammonia ligase"
                     /protein_id="HAY8936631.1"
                     /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
                     EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
                     RDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWN
                     SSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
                     QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLS
                     KNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
                     YSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
                     MDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREE
                     DDRVRMTPHPVEFELYYSV"
     gene            13080..14903
                     /gene="typA"
                     /locus_tag="JNZ89_002819"
     CDS             13080..14903
                     /gene="typA"
                     /locus_tag="JNZ89_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-dependent GTPase TypA"
                     /protein_id="HAY8936632.1"
                     /translation="MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMD
                     SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
                     DGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
                     PIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYV
                     GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAI
                     TGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
                     LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
                     DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
                     FRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
                     KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLE
                     QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDY"
BASE COUNT         3864 a         3745 c         3852 g         3478 t
ORIGIN      
        1 ctgcaagaag tgaatgctgc attgttcaaa gagtatttac cgttattaca acaaagtgag
       61 ccgaccatta aacaaccggt aagatggaag aacgcactcg gcgaactaaa tgccaatctg
      121 gatatcagta ttgccgaccc agccaaatct tcatcatcca caaacaaaga tatcaaatcg
      181 ctcaattttg atgtgaagtt accgcttaat gtcgtcacag aaaccgcaaa acagcttaat
      241 ttatctgaag gaatggatgc ggaaaaagcg caaaagcggg ctgataaaca aatcagcggg
      301 atgatgacct taggtcagat gtttcagtta atcacgattg acaacaatac cgcctcgctg
      361 caactgcgtt atacaccggg taaagttgtt tttaacggac aggagatgag cgaagaagaa
      421 tttatgtctc gtgccggacg ttttgttcat taaaatactc actcgcctct gctcattcag
      481 aggcgagcaa aatttacttg tcctgccgct gtgatgacat caacgacgtc agaagtcggt
      541 ctttttcctg ccacagtgag ttcagccatt gctgaaaatg gcgcttaaag cttttgtcat
      601 tgatgtagtc gccatgtaac tcatcggcaa taggctgtaa atccacatga acgacaattc
      661 gcgtcagttt accgcttaac atatcgaaga acggctgacg gttattgtcc ggataacaca
      721 gcgtaacatt aagcagttta tcgaattgtt tacccagtac atttagcgcc atcgcaatgc
      781 ctgccgcctt tggtggcaac aagttttgaa aagtggagtg ggtttgctga tgtttttctt
      841 gcgtgaaacg ggagccttca acgaaattga caatggtggt gggatgcagg cgaaactttt
      901 cacaagaacg ccgagtggtt tcaacatctt taccacgtcg ctccggatga cgtaataaat
      961 aagcgcggga ataacgcttc ataaacggca tatccagcgc ccagcacgcc aggccaagaa
     1021 atggcaccca ggccagctgt tgcttgagga aatatttatt catcggaatg tgcttacgaa
     1081 acagcacgca cagtacgaca atatctgccc aactacggtg gttacaaata agcagatacc
     1141 agttcttctt acttaaccct tccagcccgt gaacttccca ttgcaggtgt gggttcagat
     1201 gcagtaatac cgccagacct tcacaccagc aatacatcat aaaatcacaa aaacgcgaaa
     1261 cctttcgcca aatgactggc acaggtagca atagttttac aatcccggca atgatgatcg
     1321 ggacggaaca aaaaatagtg accaaaatgg tcaatacgat actcagcaaa agggttatcg
     1381 cagcgagtat tctcgtcata atgaatttat tcaaaaggtt agccatagac agtgcgctaa
     1441 agaagcgcaa ggcgcagatt ttagcagaaa acgacccaaa taacggatga tccttaagga
     1501 gaaaaataat tcatatctat ccacattaga aaaaatccca ttatctcaat tattagggat
     1561 ggctttattt ttaactacat gaaaaacaaa gacaaacatc atactgtaaa aagcatgata
     1621 ataaattaaa agcgatgtaa ataatttatg cacaaagtta tccacatgac gatttgcgag
     1681 cgatccagaa gatctacaaa agattttcac gaaaagcggt gaaaaactca tgtttttatc
     1741 ctgtctgtgg catcctttac ccataatctg ataaacaggc acggacatta tggttcagat
     1801 cccccaaaat ccacttatcc ttgtagatgg ttcatcttat ctttatcgcg catatcacgc
     1861 gtttcccccg ctgactaaca gcgcaggcga gccgaccggt gcgatgtatg gtgtcctcaa
     1921 catgctgcgc agtctgatca tgcaatataa accgacgcat gcagcggtgg tctttgacgc
     1981 caagggaaaa acctttcgtg atgaactgtt tgaacattac aaatcacatc gcccgccaat
     2041 gccggacgat ctgcgagcac aaatcgaacc tctgcacgcg atggttaaag cgatgggact
     2101 gccgctgctg gcggtttctg gcgtagaagc ggacgacgtt atcggtactc tggcgcgcga
     2161 agccgaaaaa gccgggcgtc cggtgctgat cagcactggc gataaagata tggcgcagct
     2221 ggtgactcca aatattacgc ttatcaatac catgacgaat accatcctcg gaccggaaga
     2281 ggtggtgaat aagtacggcg tgccgccaga actgatcatc gatttcctgg cgctgatggg
     2341 tgactcctcc gataacatcc ctggcgtacc gggcgtcggt gaaaaaaccg cgcaggcatt
     2401 gctgcaaggt ctgggcgggc tggatacgct gtatgccgag ccagaaaaaa ttgctgggtt
     2461 gagcttccgt ggcgcgaaaa caatggcagc gaagctcgag caaaacaaag aagttgctta
     2521 tctctcatac cagctggcga cgattaaaac cgacgttgaa ctggagctga cctgtgaaca
     2581 actggaagtg cagcaaccgg cagcggaaga gttgttgggg ctgttcaaaa agtatgagtt
     2641 caaacgctgg actgctgatg tcgaagcggg caaatggtta caggccaaag gggcaaaacc
     2701 agccgcgaag ccgcaggaaa ccagtgttgc agacgaagcg ccagaagtga cggcaacggt
     2761 gatttcttat gacaactacg tcaccatcct tgatgaagaa acactgaaag cgtggattgc
     2821 gaagctggaa aaagcgccgg tatttgcatt tgataccgaa accgacagcc ttgataacat
     2881 ctctgctaac ctggtcgggc tttcttttgc tatcgagcca ggcgtagcgg catatattcc
     2941 ggttgctcat gattatcttg atgcgcccga tcaaatctct cgcgagcgtg cactcgagtt
     3001 gctaaaaccg ctgctggaag atgaaaaggc gctgaaggtc gggcaaaacc tgaaatacga
     3061 tcgcggtatt ctggcgaatt acggcattga gctgcgtggg attgcgtttg ataccatgct
     3121 ggagtcctac attctcaata gcgttgccgg gcgtcacgat atggacagcc tcgcggaacg
     3181 ttggttgaag cacaaaacca tcacttttga agagattgcg ggtaaaggca aaaatccact
     3241 gacctttaac cagattgccc tcgaagaggc cggacgttac gccgccgaag atgctgatgt
     3301 caccttgcag ttgcatctga aaatgtggcc ggacctgcaa aaacacaaag ggccgttgaa
     3361 cgtcttcgag aatatcgaaa tgccgctggt gccggtgctt tcacgcattg aacgtaacgg
     3421 tgtgaagatc gatccgaaag tgctgcacaa tcattctgaa gagctcacct tgcgtctggc
     3481 tgagctggaa aagaaagcgc atgaaattgc aggtgaagaa tttaaccttt cttccaccaa
     3541 gcagttgcaa accattctgt ttgaaaaaca gggtattaaa ccgctgaaga aaacgccggg
     3601 tggcgcgccg tcaacgtcgg aagaggtact ggaagaactg gcgctggact atccgttgcc
     3661 aaaagtgatt ctggagtatc gtggtctggc gaagctgaaa tcgacctaca ccgacaagct
     3721 gccgctgatg atcaacccga aaaccgggcg tgtgcatacc tcttatcacc aggcagtaac
     3781 tgcaacggga cgtttatcgt caaccgatcc taacctgcaa aacattccgg tgcgtaacga
     3841 agaaggtcgt cgtatccgcc aggcgtttat tgcgccagag gattatgtga ttgtctcagc
     3901 ggactactcg cagattgaac tgcgcattat ggcgcatctt tcgcgtgaca aaggcttgct
     3961 gaccgcattc gcggaaggaa aagatatcca ccgggcaacg gcggcagaag tgtttggttt
     4021 gccactggaa acagtcacca gcgagcaacg ccgtagcgcg aaagcgatca actttggtct
     4081 gatttatggc atgagtgctt tcggtctggc gcggcaattg aacattccac gtaaagaagc
     4141 gcagaagtac atggaccttt acttcgaacg ctaccctggc gtgctggagt atatggaacg
     4201 cacccgtgct caggcgaaag agcagggcta cgttgaaacg ctggacggac gccgtctgta
     4261 tctgccggat atcaaatcca gcaatggtgc tcgtcgtgca gcggctgaac gtgcagccat
     4321 taacgcgcca atgcagggaa ccgccgccga cattatcaaa cgggcgatga ttgccgttga
     4381 tgcgtggtta caggctgagc aaccgcgtgt acgtatgatc atgcaggtac acgatgaact
     4441 ggtatttgaa gttcataaag atgatgttga tgccgtcgcg aagcagattc atcaactgat
     4501 ggaaaactgt acccgtctgg atgtgccgtt gctggtggaa gtggggagtg gcgaaaactg
     4561 ggatcaggcg cactaagatt cgcctgaaca tgcccttttt tcgtaagtaa gcaacataag
     4621 ctgtcacgtt ttgtgatggc tattagaaat tcctatgcaa caactgaaaa aaaattacaa
     4681 aaagtgcttt ctgaactgaa caaaaaagag taaagttagt cgcgtagggt acagaggtaa
     4741 gatgttctat ctttcagacc ttttacttca cgtaatcgga tttggctgaa tattttagcc
     4801 gccccagtca gtaatgactg gggcgttttt tattgggcga aagaaaagat ccgtaatgcc
     4861 tgatgcgcta tgtttatcag gccaacggta gaattgtaat ctattgaatt tacgggccgg
     4921 atacgccaca tccggcacaa gcattaaggc aagaaaatta ttcgccgtcc tgcgtttctt
     4981 ctacaggctg catctcgcta aaccaggtat ccagtttctg ccgcagcttg tccacgcctt
     5041 gtttcttcaa cgaagaaaac gtttcaacct gcacatcacc gttaaacgcc agtacagctt
     5101 cacgcaccat attcaattgc gctttacgtg cgccgcttgc cagtttgtcc gctttggtca
     5161 gcagcaccag aacggcgata ttgctgtcta ccgcccactc aatcatctgc tgatccaaat
     5221 ctttcagcgg atggcgaata tccattagca ccaccagacc ttgcaggcta tgacgttttt
     5281 cgaggtattc gccgagcgca cgctgccatt tgcgcttcat ctcttccggg acttccgcat
     5341 aaccgtaccc aggcaagtca accagacgct tgccgtcagc cacttcaaac aggttgataa
     5401 gctgggtgcg ccctggggtt tttgaggtac gagccaggct tttctggtta gtcagcgtgt
     5461 tcagcgcgct ggatttacct gcgttggaac ggcctgcaaa agccacttca attccggtat
     5521 cggaaggtag gtggcgaata tcaggcgcac tcatcacaaa atgcgtctgt tgataattca
     5581 aattagtcaa agcggtcgtc tccgtcagtc aaagctttgt ggcgattata cctgaaccat
     5641 aataaaaggc ggatttttcg gcgtgagcgt tgtaagtaaa aaccatacgc tttgtgagac
     5701 attgccgata gtctttatgc gaaatagcag agaaaattct gcgatgcatg tcaaataagc
     5761 tatataaatc agtgaattgc ttttatataa aactctgaaa atgtgcaaat actgatggcg
     5821 gttgattgtt tgtttaaagc gaaggcgtaa agtagcaccc atagagcgag gacgctaaca
     5881 ggaacaatga ctcaggatga gggtcaggag cgccaggagg cgaagacaga ggattgtcag
     5941 gaagacaaac gtccggagac gtaattaaac ggaaatggaa tcaacacgga ttgttccggc
     6001 taaaggaaaa acagggtgtg ttggcggcct gcaaggattg taagacccgt taagggttat
     6061 gagtcaggaa aaaaggcgac agagtaatct gtcgcctttt ttctttgctt gctttctgtt
     6121 agattccgcc gcaaatcgat actgaataaa acggctaaaa gacgaaccat tatgaaacca
     6181 tcatcttcaa actcacgcag caaaggtcat gcaaaagcgc gtcgaaaaac acgcgaggag
     6241 ctggatcagg aagctcgtga tcgcaagcgt cagaaaaaac gtcgtggtca tgcgccgggc
     6301 agccgcgcag cgggcggaaa caccacgtca ggcagcaaag gccagaacgc accaaaagat
     6361 ccacgtattg gcagtaaaac ccctattcca ttgggcgtga ctgaaaaagt caccaaacag
     6421 cacaaaccga agagtgagaa acctatgctt tcaccgcagg cggagttgga attactggaa
     6481 acggatgagc gtctggatgc gctgctggaa cgtctggaag caggcgaaac cctgagtgcc
     6541 gaagagcaat cctgggtgga tgctaaactg gatcgtattg atgagttgat gcagaaactc
     6601 ggcctctctt atgacgatga cgaagaagag gaagaagacg agaagcaaga agacatgatg
     6661 cgtctgctgc ggggcaacta acggattgcc gccgtgggcc ttcccgttct gctgataacc
     6721 cttccggtta tatgttatct ggtgtggtta ttcgttaaac tacagcggtt gtcgcggcga
     6781 caaaagtggc tgcgcaaccg gctgatgacc cgaaacgggc atccgccggt acgccgtagc
     6841 cgccagagac gccatcggaa ggagtgagca tgtctgtaca gcaaatcgac tgggatctgg
     6901 ccctgatcca gaaatataac tattccgggc cacgatacac ctcgtacccg accgcgctgg
     6961 agttttcaga agacttcggc gaacaggcgt ttttacaagc cgtggcgcgc tatcctgagc
     7021 gtccattatc tctctacgta catatcccgt tctgccataa gctttgttac ttctgcggtt
     7081 gcaataagat tgttactcgc cagcagcaca aggccgatca gtatctggac gcgctggagc
     7141 aagaaatcgt ccatcgtgca ccgctgttcg ccgggcgtca cgtcagccaa ttgcactggg
     7201 gcggcggaac gccgacgtat ctgaataaag cgcaaatcag ccgcctgatg aagctgctgc
     7261 gcgaaaactt ccagttcaat gccgatgcgg agatttcgat cgaagtcgat ccgcgggaaa
     7321 tcgaactgga tgtactcgat catttacgcg ccgaaggctt taatcgcctg agcatgggcg
     7381 tgcaggactt caacaaagaa gtgcaacgtc tggttaaccg cgagcaggat gaagagttca
     7441 tctttgcact gcttaaccat gcgcgtgaga ttggttttac ctccaccaac atcgacctga
     7501 tttacggcct gccgaaacag acgccggaga gtttcgcctt taccctgaaa cgtgtggcgg
     7561 agctgaaccc cgatcgtctg agtgtcttta actatgcgca tctgccgacc atttttgctg
     7621 ctcagcgcaa aatcaaagat gctgacctgc cgagtccgca gcaaaaactc gatatcctgc
     7681 aggaaaccat cgccttcctg acgcaatcgg gctatcagtt tatcggtatg gatcactttg
     7741 cccgtccgga tgacgagctg gcggtggccc agcgtgaagg cgtgctgcat cgtaacttcc
     7801 agggctacac cactcagggc gataccgatc tgctggggat gggcgtttcc gccatcagca
     7861 tgattggcga ctgctacgcg cagaaccaga aagagttgaa gcagtactat cagcaagtgg
     7921 atgaacaagg caatgcgctg tggcgtggta ttgcgctaac gcgtgatgac tgtattcgcc
     7981 gcgatgtgat taagtcgctc atctgcaact tccgtctgga ttacgcccct attgagaaac
     8041 agtgggattt gcacttcgct gattactttg cggaagatct caagctgctc gccccgttag
     8101 caaaagatgg gctggtggat gtggatgaga agggaataca ggtgacggcg aaaggtcgct
     8161 tgctgatccg caacatttgc atgtgctttg atacctatct gcgccagaaa gcgcggatgc
     8221 agcagttctc acgggtgatt tgaatagtga atggcgcttc gtttacaaag tagaaaacga
     8281 aagcgccatc aatgtgctga gaacaagatt gcctgatgcg ctacgcttat caggcctaca
     8341 aaacctgttg aaaatattgc ttttgtaggc cggataaggc gttcacgccg catccggcat
     8401 gaacaaagag cacttcatca gcaatctgaa actcaactaa acagcccaat cattgcggca
     8461 cacagcacgg cagcaacggc agtttgcggt gtgtggctgt caactgcgcc actcgatacc
     8521 agattaatta ttgattccag cataatgact ctccccgttt tccgggcaga tcatactgaa
     8581 cttatcggaa cagtaaagcg taaaatacca gcaatttgcg ctcaataatc aatctttaca
     8641 cacaagctgt gaatcactcc atccccagct cttttaactt acgcgtcagg gtgttgcggc
     8701 cccagccgag tagccgcgcc gcttcctgtt tatgcccctg cgtatgtcgc aacgcggtcg
     8761 tcagtaacgt ccgctccagc tctggctgcg cttcggaaag cagattttga tgaccggaac
     8821 gcagcgctct gtctgcccac tgcgcaagaa gcgtcgccca gctgtccggt tgcatttgcg
     8881 aagtactctc cgcaaccgtt gattcaaaca gttcgccggg caaatcctga atcaacactt
     8941 cctgcccggc ggccatcacc gttagccagc ggcaggtgtt ttccagctgg cgcacgttgc
     9001 ctggccacgc cagacgcgtc agagcagctt cggtttccgg atgcagtaac ttcgcttcta
     9061 cgcccagttc gcgcgcggca acctgtaaaa aatggcgcgc cagacgggga atatcttccc
     9121 gacgttcgcg cagcggcggc agatgaacgc ggataacgtt taggcggtgg aacagatcct
     9181 cacggaactt accttcctgc actcgctgtt cgagattctg gtgagtggca gcgataatcc
     9241 gcacatccac tttcaccggc gcatagccgc caacgcggta aaactgaccg tctgccagca
     9301 cgcgcagcaa acgcgtctgc acatccagcg gcatatcacc aatttcgtcg aggaataatg
     9361 taccgccatc ggcctgttca aaacgcccct gacgaatggt attcgcgcca gtaaacgcgc
     9421 ctttctcgtg gccaaacagt tctgattcga tcaaatcttt tgggatagct gccatattca
     9481 gcgcgataaa cggtgctttg gcgcgcggac tgtggcgatg cagggcatga gcgaccagtt
     9541 ctttaccggt gccggattcg ccgttaatca gcacgctaat agaagaacgc gaaagccgac
     9601 cgataatacg gaacacgtcc tgcatggctg gcgcttcgcc gatgatatcg gtcgttgggc
     9661 cgttaagctg aatattacgc ggctgctgct gttcctggta atgactgata gcgcgctcaa
     9721 ccagcgccac ggcttcgtcg atatcaaacg gtttgggcag ataatcaaac gccccttgtt
     9781 gataggcgct gacggcagca tccagatcgg aatgtgcggt cataatgatg accggaagca
     9841 ttggatggcg ctgtttaatc tgcttgagca gcgccagccc gtccattccc ggcatacgga
     9901 tatctgaaag cagcacatcc ggcgttttgc tcgccagcgc ctccagtact tccgcgccgt
     9961 tctcaaatgt cgtacaggtt aaacccgctc cagcgagcgc acgttcaagc acccaacgga
    10021 tggaactatc gtcatcgact acccagacta tccctcgttg cataaacgtc acctttattt
    10081 cctgataggc aggtaaaccg agaactcggt atgacctggc caactggtaa attcaatttt
    10141 gcctgaatgc tgatcaatca aattacgggc gatggataag ccaagcccgg tgccaccttc
    10201 gcggccgctg accatcgggt aaaacagcgt atcctgcaaa tgaggcggaa tgcccggccc
    10261 gttatcttcc acatcaatcc gcgccgccag ccggtagcgc tcgccgtgta aggtcagttg
    10321 aaacgcggtg cgggtacgca gaatgatttc accgccttcc ggccccagcg cctgtagcgc
    10381 attgcgcaca atattcagca agacctgttc aatttgatcc gggtcgtgcg ccagttccgg
    10441 caggctggga tcgtaatcac gaatcaaccg cacgttgtcc ggcagttcca tcgacaccag
    10501 cgttaccacg cgttcagcca ctttgtgaat actttcggta acgcgcgtac cgggcagctg
    10561 cggccccaac agacggtcga ccagatttcg cagccggtcc gcctgttcga taatcacttt
    10621 ggtatattcg agtagtgatg ggtcaggtaa cgctttgctg agcagctgcg ccgcgccacg
    10681 taaaccgcca agcggatttt taatctcatg tgccaggccg cgcactaaat cacgggcagc
    10741 aacctgctgg gcgtgctgta gctgttcctg acttaagcgg cgctggttat ccatcggagc
    10801 catctccagc aggatcatgc cgtccggcat acgctgggcc gtcacagaaa ggatatgcga
    10861 gcgcccgtcg atgaccagcg tcacttcgtt atcggtaaaa ccttgccccg cctccagact
    10921 ttcttgcatc agctcgatat ttaatgagaa gtagctcaac agttccggta acggtgtacc
    10981 aaacaatttg cgggagcttt gggcgagcag ttgttgcgcg gcagggttgg cgtaatggat
    11041 ctccaggttg tcatcgatta acaaaatact gttaatcagc gagttgagga tctgcccagc
    11101 atcgggctgc gtgcctgttg ccataaagca gtctcctgaa caggttgcac cattttagtg
    11161 cattatagct ttttacggat aaaaagcgcg aagcatcaga gaattgacgg agaaaaaagc
    11221 ccatgcagag atgggctgaa agtttccacg gcaactaaat cccggcgttg ttgcgccggg
    11281 tagtacaact tcaactatta gacgctgtag tacagctcaa actctaccgg atgcggagtc
    11341 atacgcacgc ggtcatcttc ttcgcgacgc agagcgatgt acgcatcaat tgcttcgtca
    11401 gtgaacacgc caccggcttt caggaactcg cggtccagat ccagttcgtt cagtgcttct
    11461 tccagagagc ctgcaacctg tgggatctct ttcgcttctt ctggcggcag gtcatacagg
    11521 tttttgtcca tggcttcacc cggatggatc ttgttcttga taccatcaag accggccatc
    11581 agcagggcag caaagcacag gtacgggtta gctgccggat ccgggaaacg tacttcgata
    11641 cgacgtgctt tcggagaaga aaccaccgga atacggatag acgcagaacg gttacgcgca
    11701 gagtaagcca gcattaccgg tgcttcatag cccgggacca gacgcttata agagttggtg
    11761 gtcgggtttg ccagggcgtt aatcgcttta gcgtgtttga ttacgccgcc aatgtagtac
    11821 agcgcctgct cagacagacc tgcgtatttg tcgcctgcga acaggttaac gccgttttta
    11881 gacagagaca tgtggcagtg cataccggag ccgttatcac cgaacatcgg ttttggcata
    11941 aaggtcgcgg ttttaccgaa gcggtgcgct acgttgtgca caacatattt gtagatctga
    12001 atttcgtcag cttttttggt catggtattg aagcgggtag ccacttcgtt ctgaccagca
    12061 gtcgctactt cgtggtgatg ggcttcaacc accagcccca tctgttccat caccagacac
    12121 atttcagaac gaatatcctg agccgagtct accggtggaa ccgggaagta accgcctttc
    12181 actgccggac ggtgaccttt gttaccacct tcgtattggg tggaggagtt ccatgcgcct
    12241 tcgatatcgt cgatagcaac gtgggaaccg gagatagatg atccgaaacg gatgtcatcg
    12301 aacaggaaga attcaggttc tggcccgaac agtacggtgt cggcaatgcc agtggaacgc
    12361 aggtaatctt cggcgcgctt cgcaatggag cgcgggtcac ggtcatagcc ttgcagggtg
    12421 ccaggttcaa ggatgtcgca acggataatc agggtggagt cggcgaagaa cgggtcaatc
    12481 actgcggtgg atgcgtctgg catcagcacc atgtcggact cgttaatgcc tttccagccg
    12541 ccaatcgagg agccgtcaaa cattttgcct tcttcgaaga attcagcatt cacctgatga
    12601 gcagggatag tgacgtgctg ttctttacct ttagtatcgg tgaagcgcaa atcaacaaac
    12661 ttcacttcgt gctcgttcag catcgtcagt acgtgttcag cggacatact ttaactctcc
    12721 tggattggtc atggtcgtcg tggtaacgaa atctgcaatt attttggccg tgtcgccgta
    12781 aaaaagataa agcgaaatct gtgccaactt ttaaattgcc cctaaaaggc gttatcatgc
    12841 gcaccatcgt gcaaaagggc tgcaccacga tgtgaatgtt gcaccaatat agtgcttcaa
    12901 tggaaacatt aagcaccatg ttggtgcaat gacctttgga taaccctttt tatgctccgt
    12961 gaaagcgatc acaaagggac tctgcaatac ttgtttgcgg aggatgtttg tgatcctgtt
    13021 ttgtagtgcg attaatccgt gtacaataac gcgctatttc taatgcctga ggcaaagttg
    13081 tgatcgaaaa attgcgtaat atcgccatca tcgcgcacgt agaccatggt aaaaccaccc
    13141 tggtagacaa gctgctccaa caatccggta cgttcgactc tcgtgccgaa acccaagagc
    13201 gcgtgatgga ctccaacgat ttggagaaag agcgtgggat taccatcctc gcgaaaaaca
    13261 ccgctatcaa atggaatgat taccgtatca acatcgttga taccccgggg cacgccgact
    13321 tcggtggtga agttgaacgt gtaatgtcca tggtagactc agtgctgctg gtggttgacg
    13381 catttgacgg cccgatgccg caaacgcgct tcgtaaccaa aaaagcgttt gcttacggcc
    13441 tgaagccgat tgttgttatc aacaaagttg accgccctgg cgcgcgtcct gattgggttg
    13501 tggatcaggt attcgatctg ttcgttaacc tcgacgcgac cgacgagcag ctggacttcc
    13561 cgatcgttta cgcttctgcg ctgaacggta tcgcgggtct ggaccacgaa gatatggcgg
    13621 aagacatgac cccgctgtac caggcgattg ttgaccacgt tcctgcgccg gacgttgacc
    13681 ttgacggtcc gttccagatg cagatttctc agctcgatta caacagctat gttggcgtta
    13741 tcggcattgg ccgcatcaag cgcggtaaag tgaagccgaa ccagcaggtc actatcatcg
    13801 atagcgaagg caaaacccgc aacgcgaaag tcggtaaagt gctgggccac ctcggtctgg
    13861 aacgtatcga aaccgacctg gcggaagctg gcgatatcgt tgcgatcacg ggccttggcg
    13921 aactgaacat ttctgacacc gtttgcgaca cgcaaaacgt tgaagcgctg ccggcactct
    13981 ccgttgatga gccgactgtt tctatgttct tctgcgttaa cacctcgccg ttctgcggta
    14041 aagaaggtaa gttcgtaacg tctcgtcaga tcctggatcg tctgaacaaa gaactggtac
    14101 acaacgttgc gctgcgcgta gaagaaaccg aagacgctga tgcgttccgc gtttctggtc
    14161 gtggcgaact acacctgtct gttctgatcg aaaacatgcg tcgtgaaggt ttcgaactgg
    14221 cggtatcccg tccgaaagtt atcttccgtg aaatcgacgg tcgtaaacaa gagccatatg
    14281 aaaacgtgac tctggacgtt gaagaacagc atcagggttc tgtaatgcag gcgctgggcg
    14341 aacgtaaagg cgacctgaaa aacatgaatc cagacggtaa aggccgcgta cgtctcgact
    14401 acgtgatccc aagccgtggt ctgattggct tccgttctga gttcatgacc atgacttccg
    14461 gtactggtct gctgtactcc accttcagcc actacgacga cgtacgtccg ggtgaagtgg
    14521 gtcagcgtca gaacggcgta ctgatctcta acggtcaggg taaagcggtc gcgttcgcgc
    14581 tgttcggtct gcaggatcgc ggtaagctgt tcctcggtca cggtgcagaa gtttacgaag
    14641 gtcagattat cggtattcat agccgctcta acgacctgac tgtaaactgc ctgaccggta
    14701 agaaactgac caacatgcgt gcttccggta ctgacgaagc cgttgttctg gttccgccta
    14761 tccgcatgac tctggaacaa gctctggagt tcatcgatga tgacgaactg gtagaagtga
    14821 ctccgacctc tatccgtatt cgtaaacgtc acctgacgga aaacgatcgt cgtcgcgcca
    14881 accgcgcacc gaaagactat taatttcgtt ttttagttat aaaaaacctg ccatcgctg
//
LOCUS       DADMIB010000100        14588 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.100, whole genome shotgun sequence.
ACCESSION   DADMIB010000100 DADMIB010000000
VERSION     DADMIB010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14588
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.100"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..184)
                     /locus_tag="JNZ89_002820"
     CDS             complement(<1..184)
                     /locus_tag="JNZ89_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936633.1"
                     /translation="MKNIKLLGSAMLVSLALFSQNSLAKEYKIGASLLTQQHPFYIDL
                     ANAMKEEAKKDNVNLSV"
     gene            complement(220..1074)
                     /locus_tag="JNZ89_002821"
     CDS             complement(220..1074)
                     /locus_tag="JNZ89_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose bisphosphate family class II aldolase"
                     /protein_id="HAY8936634.1"
                     /translation="MYIISSKNMLKKAQSEGYAVPAFNIHNLETLQVVVESAAQLRSP
                     VMLAGTPGTYRYGGVGSLISLVQSLAREYNLPLVLHLDHHEESDDIFNKVRAGIRSVM
                     IDGSHLPFEDNIARVQEVTTFCHRFDVSVEAELGRLGGQEDDLLVDEKDSAYTSPAAA
                     AEFVQRTQIDSLAVAIGTAHGLYAHEPRLDFVRLEQIRQRVEIPLVLHGASGLSEQDV
                     QHCIRRGICKVNVATELKIAFADALKGYFYNNPAANDPRHYMQPAKAAMKEVVTRIIG
                     VCGSEGKI"
     gene            1417..2247
                     /locus_tag="JNZ89_002822"
     CDS             1417..2247
                     /locus_tag="JNZ89_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8936635.1"
                     /translation="MKSVNVPRKSSNLLKRRLKIAEIVAAQGEIKVDDLSAQLGVSGV
                     TIRGDLSYLEQQGYLKRSFGGAIATPLSSEPEAIQPIAPLSLAQQMEIARHCARLIRD
                     RDTLFLGHGTICRKIIPLLSEVKKLRLITNDPEHALLANQFIDGEIILAGSEMLRPDT
                     ALAGKPLEQALQHFTITHSILEINHLDADGTLNINVPRLAAAWQLCFDHAQNKTVIVA
                     ADPAPSTAAIGHLHQAENVIVSRSINEQYQQQLQSADFVILYTSNECFTWSNRERLQE
                     "
     gene            2279..3214
                     /locus_tag="JNZ89_002823"
     CDS             2279..3214
                     /locus_tag="JNZ89_002823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001446002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8936636.1"
                     /translation="MGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSH
                     RAIFFGCVGNDDFGRLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQQHDFVFNI
                     PNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFSFRMIDVMRKAITTIKSAGGTVSFDP
                     NIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGGVKH
                     VAIKRAQRGASYYKLKNGTLHAQHVTGHDIEIIDPTGAGDCFGATFITLFLSGFPAHK
                     ALQYANASGALAVMRQGPMEGISSLADIEDFLQQH"
     gene            3307..3549
                     /locus_tag="JNZ89_002824"
     CDS             3307..3549
                     /locus_tag="JNZ89_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdT family protein"
                     /protein_id="HAY8936637.1"
                     /translation="MDTRFVQAHKEARWALGLTLLYLAVWLAAAYLPDVAPGFTGFPR
                     WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA"
     gene            3539..4990
                     /gene="panF"
                     /locus_tag="JNZ89_002825"
     CDS             3539..4990
                     /gene="panF"
                     /locus_tag="JNZ89_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HAY8936638.1"
                     /translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG
                     GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
                     RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET
                     GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVETLQ
                     TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
                     TIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
                     TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI
                     IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFH
                     PIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK"
     gene            5002..5883
                     /gene="prmA"
                     /locus_tag="JNZ89_002826"
     CDS             5002..5883
                     /gene="prmA"
                     /locus_tag="JNZ89_002826"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HAY8936639.1"
                     /translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL
                     PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN
                     FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK
                     TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
                     PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFAL
                     DPVVEKEEWCRITGRKN"
     gene            6212..7177
                     /gene="dusB"
                     /locus_tag="JNZ89_002827"
     CDS             6212..7177
                     /gene="dusB"
                     /locus_tag="JNZ89_002827"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HAY8936640.1"
                     /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
                     NPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPA
                     KKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAED
                     CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGA
                     DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGY
                     RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA"
     gene            7203..7499
                     /gene="fis"
                     /locus_tag="JNZ89_002828"
     CDS             7203..7499
                     /gene="fis"
                     /locus_tag="JNZ89_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HAY8936641.1"
                     /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
                     QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
     gene            7585..8469
                     /gene="yhdJ"
                     /locus_tag="JNZ89_002829"
     CDS             7585..8469
                     /gene="yhdJ"
                     /locus_tag="JNZ89_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HAY8936642.1"
                     /translation="MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYN
                     IGKNFDGLIEAWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLF
                     TIKSRIVWSYDSSGVQAKKHYGSMYDPILMMVKDAKNYTFNGDAILVEAKTGSQRALI
                     DYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDIV
                     LDPFAGSFTTGAVAVSSGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTG
                     NLSKRSRLSEVDPDLIAK"
     gene            8553..8732
                     /locus_tag="JNZ89_002830"
     CDS             8553..8732
                     /locus_tag="JNZ89_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2556 domain-containing protein"
                     /protein_id="HAY8936643.1"
                     /translation="MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNP
                     LKLVNCDELNFQDRM"
     gene            complement(8735..9397)
                     /gene="acrS"
                     /locus_tag="JNZ89_002831"
     CDS             complement(8735..9397)
                     /gene="acrS"
                     /locus_tag="JNZ89_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrS"
                     /protein_id="HAY8936644.1"
                     /translation="MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVT
                     RGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAK
                     IPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLD
                     VVMIIINGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELS
                     VM"
     gene            9796..10953
                     /gene="acrE"
                     /locus_tag="JNZ89_002832"
     CDS             9796..10953
                     /gene="acrE"
                     /locus_tag="JNZ89_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrE"
                     /protein_id="HAY8936645.1"
                     /translation="MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIV
                     KTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQA
                     NYNSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAK
                     GTVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQS
                     SNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLR
                     AVFPNPQHTLLPGMYVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEAR
                     PVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK"
     gene            10965..14069
                     /gene="acrF"
                     /locus_tag="JNZ89_002833"
     CDS             10965..14069
                     /gene="acrF"
                     /locus_tag="JNZ89_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit AcrF"
                     /protein_id="HAY8936646.1"
                     /translation="MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVS
                     VSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTNDSAGSVTITLTFQSGTDPDI
                     AQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVAS
                     NVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQ
                     LGGTPALPGQQLNASIIAQTRLKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYN
                     VIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQ
                     LSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLS
                     AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENK
                     GGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEE
                     DQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAG
                     MAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFE
                     LIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALSV
                     SLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRMLPEDVDKLYVRSANGEMV
                     PFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGY
                     DWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLA
                     ATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLR
                     PILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFLPVFFVVIRR
                     CFKG"
     gene            14322..14543
                     /locus_tag="JNZ89_002834"
     CDS             14322..14543
                     /locus_tag="JNZ89_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936647.1"
                     /translation="MKRLIPVALLTALLAGCAHDSPCVPVYDDQGCLVHTNTCMKGTT
                     QDNWETAGAIAGGAAAVAGLTMGIIAMSK"
BASE COUNT         3662 a         3489 c         3622 g         3815 t
ORIGIN      
        1 agacacttaa attgacattg tctttttttg cctcttcttt catggcattc gcaagatcaa
       61 tatagaaagg atgttgctgt gttaataatg acgcaccaat tttatactct tttgccaacg
      121 aattttgcga gaacaatgcc aggctcacca acatagctga accaagtaat ttaatatttt
      181 tcataaacaa tcctcattgt ttttgtaggg tacaacgtct taaatttttc cttcactacc
      241 acagacacca ataatacgag ttacgacttc tttcatggcg gcctttgcgg gctgcatata
      301 gtggcgtgga tcatttgccg caggattgtt gtagaaatat ccttttaacg catcggcaaa
      361 cgcaattttc aattctgtcg cgacattcac tttacaaata ccgcggcgaa tacagtgctg
      421 aacgtcctgt tctgataagc ccgaagcacc atgcaacacc agtggaatct ccactcgctg
      481 acgaatctgt tccagccgca caaaatccag tcgtggttca tgcgcatata aaccatgtgc
      541 tgtgccgatt gctacggcca gggagtcaat ttgggtacgt tgaacaaact ctgcagctgc
      601 ggctggtgag gtataagcgg aatctttttc atccaccagc agatcgtcct cctggccgcc
      661 aagacgccct agctcggcct caacgctaac atcaaagcga tggcaaaagg tggtaacttc
      721 ttgcactcgc gcaatgttgt cttcaaatgg caaatgggag ccatcaatca tgacagaacg
      781 gatccctgcg cgaaccttgt taaaaatgtc atcactctct tcatgatggt cgagatgcag
      841 gactaacggc aggttgtact cgcgagccag cgattgtact aacgaaatta aacttcccac
      901 gccaccataa cgataagtac cgggtgttcc cgccagcata acgggagagc gaagttgtgc
      961 agcgctctca acaactacct gtaaagtttc aaggttatga atgttgaaag cggggacggc
     1021 atatccctct gactgggctt ttttcagcat gtttttgctt gaaatgatgt acatcgcagc
     1081 tcctgttatt tgtcgttcgc cttacaaaat gaagaaagag aatattcact ttcattttga
     1141 aagcaaacta gcacagcaaa agcggcaaaa agcgtgatac atgtcgaata tcatcaaaat
     1201 aacttacaaa aaaataactt aatttgtttt tcactttaca agtgaaacca ataacatctc
     1261 tgcataaata tgaataaatt catttatttt tcaatgaatt aatctatttt tgttgcgatt
     1321 tttgacccat gattttcttt tcgaattgtc gatattattg aaggataact ttcaaagaaa
     1381 aatacaaggg gctatagtgt tacgcattaa aggccaatga agagtgttaa cgtgccgaga
     1441 aaatcgtcta acctactgaa acgcagatta aaaattgcag aaattgttgc cgcccaaggt
     1501 gaaatcaaag ttgatgactt atctgcgcaa cttggtgtct ctggcgtgac gatccgcggc
     1561 gatctcagtt atctggagca acagggatat ttaaagcgat catttggcgg tgctattgcg
     1621 acaccactct cctctgaacc agaagcgata caaccgatcg cgccattgtc tctggcacaa
     1681 caaatggaaa tagcacgaca ttgcgcacgg ttaattcgcg atcgtgacac gctatttctt
     1741 ggacatggga caatctgccg taagatcatt ccattgctca gcgaagtgaa aaaactgcgt
     1801 ctgatcacca acgatcccga acatgcgctg ctggcaaatc agtttattga tggcgaaata
     1861 atactggctg gcagtgaaat gctgcgcccc gacaccgcac tggccggaaa accgcttgaa
     1921 caggcacttc agcatttcac cattacacat agcattctgg aaatcaacca tctggatgct
     1981 gatggtactt taaatatcaa cgttcccaga ctggccgctg cctggcagct ctgtttcgat
     2041 catgcccaga ataagacggt tatcgttgcc gccgatcctg cgccatcaac ggctgctatc
     2101 gggcatttgc atcaggcaga aaatgtgatc gtcagccgca gcattaacga acaatatcag
     2161 caacaattgc agtcggctga tttcgttatc ctttatacca gtaatgagtg ctttacctgg
     2221 tccaatcgcg aaaggcttca ggaatgagag gggttttgtg acaataacta tctgcgctat
     2281 gggcgaattg ctggccgagt ttttgtcccg caacccacat caaaaattca ctcagcctgg
     2341 ggagtttatc gggccatttc ccagcggtgc gccagcaatt tttgctgctc aggtggcaaa
     2401 actgtcccat cgggccatct tcttcggatg tgttggtaat gatgattttg gccgactcat
     2461 tatagagcgc ctccgtcatg aaggtgtcat taccgatggg atccatgtta tgaacaatgc
     2521 cgtcacaggt acggcgttcg tgagttatca aaatccccag cagcacgatt tcgtctttaa
     2581 tatccctaac agcgcctgcg gcttgtttac tgctgagcac attgataagg atctgctaaa
     2641 acagtgtaac catctccata ttgtgggctc atcattgttc tcatttcgca tgatcgatgt
     2701 catgcgtaaa gcaataacga cgatcaaatc ggctggcggc accgtttctt tcgatcccaa
     2761 tattcgcaaa gagatgctga gcattcctga aatggcgcag gctctcgatt atttgattga
     2821 atatacggat attttcatcc ccagcgaaag cgaactccct ttcttcgcgc gtcacaaaaa
     2881 tctgtcagaa gaacagattg ttagcgatct tctccacggc ggcgtaaaac atgtggcgat
     2941 aaaacgcgcc cagcgtgggg ccagctatta caagcttaaa aacggtacat tacacgccca
     3001 gcatgttaca ggccacgata tcgaaattat cgatccaacg ggtgcaggcg actgctttgg
     3061 cgcaacgttt atcactcttt tcttatccgg tttcccggca cataaggcac tgcaatatgc
     3121 aaatgccagc ggcgcgctcg ccgtaatgcg gcaaggtccg atggaaggga tatcctcact
     3181 ggctgacatt gaagactttt tgcagcagca ctgaacggca attttctgtc agattatttt
     3241 ccctgcctga agagttgccg tagaattgcc cgtttctcgt atccccccat gaggaggaac
     3301 ccttccgtgg acactcgttt tgttcaggcc cataaagagg cgcgctgggc gctggggctg
     3361 acccttttgt atctggcagt ttggttagca gccgcttact tacctgacgt tgcccccggt
     3421 tttaccggct ttccgcgctg gtttgagatg gcctgcatcc tgacgccgct gctgtttatt
     3481 ggactgtgct gggcgatggt gaaatttatc tatcgcgata tcccactgga ggatgacgat
     3541 gcagcttgaa gtgattctac cgctggtcgc ctatctggtg gtggtgttcg gtatctctgt
     3601 ttatgcgatg cgtaaacgga gcaccggtac cttccttaat gagtatttcc tcggcagccg
     3661 ctctatgggc ggtattgtgc tggcgatgac gctcaccgcg acctatatca gtgcaagttc
     3721 gtttatcggc gggcctggag ctgcttataa atacggcctg ggttgggtat tgctggcgat
     3781 gattcagctt cctgcagtct ggctttcgct cggtattctc ggcaagaagt tcgcgattct
     3841 tgcgcgccgc tacaatgcag tgacgctgaa cgacatgctg tttgcccgct accagagtcg
     3901 tcttctggtg tggctggcga gtttgagttt gctggttgcg ttcgttgggg caatgaccgt
     3961 gcagtttatc ggcggtgcgc gcctgctgga aaccgcggcg ggtattcctt atgaaaccgg
     4021 gctgctgatt ttcggtatca gcattgcgtt gtataccgcc tttggcggct ttcgcgccag
     4081 cgtgctgaac gacaccatgc aagggcttgt gatgctgatt ggcaccgttg tgctgcttat
     4141 tggcgtggta catgccgcag gtggtttaag taatgcggta gagacgctgc aaaccatcga
     4201 tccgcaactg gttacgccac aaggcgctga cgatattctg tcgcctgcct ttatgacgtc
     4261 gttctgggta ctggtgtgct ttggcgtgat tggcctgccg catactgcgg tgcgctgtat
     4321 ctcttataaa gacagcaaag cggtacaccg ggggatcatc atcggtacga ttgtagtcgc
     4381 aatcctgatg ttcggtatgc acctggccgg agcgttaggt cgtgcagtga tccccgatct
     4441 caccgtaccg gatctggtga tcccgacgtt aatggtaaaa gtgctgccac cgtttgctgc
     4501 cgggatcttt ctggctgcac ctatggctgc gatcatgtcg acaattaacg cccaattgct
     4561 acaaagttcc gctacgatca ttaaagatct ctatctgaat atccgtccgg atcaaatgca
     4621 aaacgagacg cgtctgaagc ggatgtcggc ggtaattacg ttagttctcg gcgcgttgct
     4681 gctgcttgcc gcctggaagc cgccagaaat gatcatctgg ctgaatttgc tggccttcgg
     4741 tgggttggaa gccgttttcc tgtggccgct ggtgctgggt ctttactggg aacgcgccaa
     4801 cgccaaaggc gcgctaagtg cgatgatcgt tggcggcgtg ctgtatgccg tactcgcgac
     4861 gctgaatatt cagtacctgg gcttccaccc tatcgtgccc tcgttactac taagtttgct
     4921 ggctttcctg gtcggaaacc gtttcggtac atccgtcccg caagctaccg ttttgactac
     4981 tgataaataa agagttttgc catgccttgg atccaactga aactgaacac caccggcgcg
     5041 aacgctgaag atcttagcga tgcgctgatg gaagcgggtg ccgtttctat cacttttcag
     5101 gatacccacg atacgccagt atttgagccg ctgccgggcg aaacgcgcct gtggggcgac
     5161 accgatgtga ttggtctgtt cgacgctgaa accgatatga acgacgtggt ggcgattctg
     5221 gaaaaccatc cgctgctcgg cgcaggcttc gcgcataaaa tcgaacaact ggaagataaa
     5281 gactgggagc gcgaatggat ggataatttc cacccgatgc gctttggtga acgactgtgg
     5341 atctgcccaa gctggcgtga tgtgccggac gaaaacgccg tcaacgtgat gttagaccca
     5401 gggctggcgt ttggtacggg tacccatcca actacctctc tgtgcctaca atggctcgac
     5461 agcctcgatt taactggtaa aacagtcatc gactttggct gcggttccgg cattctggct
     5521 atcgcggcgc tgaaactggg tgcagcaaaa gccattggta ttgatatcga tccgcaggcg
     5581 attcaggcta gccgcgacaa cgccgaacgt aatggcgttt ctgaccgtct ggaactctac
     5641 ttaccgaaag atcagccaga agaaatgaaa gccgacgtgg tggtcgcgaa catccttgca
     5701 ggcccattac gtgaactggc accgttaatc agcgtcctgc cggtttcagg cggtttgctg
     5761 ggcctttccg gtattctggc aagccaggca gagagcgttt gtgaagctta tgccgatagc
     5821 ttcgcactgg acccggtcgt ggaaaaagaa gagtggtgcc gtattaccgg tcgtaagaat
     5881 taaccttcgc atcgccgtag ggtgacgcgg ggcgaagtgc gagcaagctc acaaaaggca
     5941 cgtaaatttg ccggttattt acgcaaattt gcgtgccaaa attttcattc ataaagaaaa
     6001 attgagaact tactcaaatt tctttgaatg taaattttag tcactatttt ctaatatgat
     6061 gatttttatg agtaattatc gcaccacgct cattttaaat gcaattcttt gatccatctc
     6121 agaggattgg tcaaagtttg gcctttcatc tcgtgcaaaa aatgcgtaat atacgccgcc
     6181 ttgcagtcac agtatggtca tttcttaact catgcgcatc ggacaatatc agctcagaaa
     6241 tcgcctgatc gcagcgccca tggctggcat tacagacaga ccttttcgga cgttgtgcta
     6301 cgagatggga gccggattga cagtatccga gatgatgtct tctaacccac aggtttggga
     6361 aagcgacaaa tctcgtttac ggatggtgca cattgatgaa cccggtattc gcaccgtgca
     6421 aattgctggt agcgatccga aagaaatggc agatgcagca cgtattaacg tggaaagcgg
     6481 tgcccagatt attgatatca atatgggttg cccggctaaa aaagtgaatc gcaagctcgc
     6541 aggttcagcc ctcttgcagt acccggatgt cgttaaatcg atccttaccg aggtcgtcaa
     6601 tgcagtggac gttcctgtta ccctgaagat tcgcactggc tgggcaccgg aacaccgtaa
     6661 ctgcgaagag attgcccaac tggctgaaga ctgtggcatt caggctctga ccattcatgg
     6721 ccgtacacgc gcctgtttgt tcaatggaga agctgagtac gacagtattc gggcagttaa
     6781 gcagaaagtt tccattccgg ttatcgcgaa tggcgacatt actgacccgc ttaaagccag
     6841 agctgtgctc gactatacag gggcggatgc cctgatgata ggccgcgcag ctcagggaag
     6901 accctggatc tttcgggaaa tccagcatta tctggacact ggggagttgc tgcccccact
     6961 gcctttggca gaggttaagc gcttgctttg cgcgcacgtt cgggaactgc atgactttta
     7021 tggtccggca aaagggtacc gaattgcacg taaacacgtt tcctggtatc tccaggaaca
     7081 cgctccaaat gaccagtttc ggcgcacatt caacgccatt gaggatgcca gcgaacagct
     7141 ggaggcgttg gaggcatact tcgaaaattt tgcgtaaaca gaaataaaga gctgacagaa
     7201 ctatgttcga acaacgcgta aattctgacg tactgaccgt ttctaccgtt aactctcagg
     7261 atcaggtaac ccaaaaaccc ctgcgtgact cggttaaaca ggcactgaag aactattttg
     7321 ctcaactgaa tggtcaggat gtgaatgacc tctatgagct ggtactggct gaagtagaac
     7381 agcccctgtt ggacatggtg atgcaataca cccgtggtaa ccagacccgt gctgcgctga
     7441 tgatgggcat caaccgtggt acgctgcgta aaaaattgaa aaaatacggc atgaactaat
     7501 tcaggttagc taaatgcttg attaaaaagg cgctactcgg catggggaag cgcctttttt
     7561 ataggtgtca caaagggagt gaccatgaga acaggatgtg aaccgacccg gtttggtaat
     7621 gaagctaaga ccattattca cggtgatgcg cttgccgaac ttaaaaagat ccccgccgaa
     7681 agtgtcgatc tgatctttgc cgacccacca tataacatcg gtaaaaattt tgatggtctg
     7741 atcgaagcct ggaaagaaga tctgtttatc gactggctgt ttgaagtgat tgcagagtgc
     7801 caccgcgttc tgaaaaagca gggcagcatg tacatcatga acagcacgga aaacatgccc
     7861 tttatcgatc tccagtgccg caagcttttt accatcaaaa gtcgcatcgt ctggtcatat
     7921 gacagttctg gagtacaggc gaaaaaacac tacggctcca tgtacgaccc catcctgatg
     7981 atggtgaaag acgcaaagaa ctacacattc aacggtgatg ctattctggt agaagccaaa
     8041 accggatcgc agcgcgcgtt gatcgattat cgcaaaaatc ctccacagcc atacaatcat
     8101 caaaaagtac cgggtaacgt ctgggatttt ccgcgcgtgc gttatttgat ggatgaatat
     8161 gagaaccacc cgacgcaaaa accggaagcc ttactgaaac gcattattct cgcctcttcc
     8221 aacccaggcg atatcgttct cgacccgttt gccggtagct ttactaccgg tgccgtagcc
     8281 gtctccagcg ggcgaaaatt cattggtatt gagatcaaca gcgagtacat caaaatgggg
     8341 cttcgacggc tggatgtcgc gtcgcattac tctgcggaag aactggcgaa agtgaaaaaa
     8401 agaaagaccg gcaacctgtc aaaacgaagc cggttaagcg aagttgaccc cgatctcatt
     8461 gcaaagtaaa ggaagtgtaa gcctggtttt cagattattc atttcgtgta tatttcctgc
     8521 cagacttggt taaacatgca caggctcagg taatgattcg caagtattgg tggctcgtcg
     8581 ttttcgctgt cttcgttttt ctgtttgata ctttactgat gcagtggatt gaactgctga
     8641 caacagaaac agacaaatgc cgtaatatga actcagttaa tccactaaaa ctggttaact
     8701 gtgacgaact gaattttcag gacagaatgt gaatttacat gacacttaat tcattcgttt
     8761 gatgaattaa tttcgttatg ttttcatctg gcatgaacat tcttaatacg ttatcgacca
     8821 gcgcgggtgc ttgtttataa agatcataac ccgccatatt cattaaccag ttttgaacaa
     8881 ttccgctgaa ggcaccatta ataataatca tcacaacatc taaatcgagg ttatttgcta
     8941 cacaaccttg ttgctgacac gcctgcaata cttcgcggag agtctgcgga ttaaagccca
     9001 tcttttcgcg tatcactccc tcggccagca tctcatcatt aaattcacat ttgtgatata
     9061 agattttcag caacgcctgc tggcggggaa ttttggcaat atattgcaag ccgacaatca
     9121 atttttcacg caattgttga aacgggtcat gctctaatcc agccgtcaag tgttcctgga
     9181 ttaactcccg caatgaaggc tgttgcaacc acatctcatt aaacagttga gtcttgtttt
     9241 cgaagtgcca gtagatagcg ccacgcgtaa cgttagcggc gtcggcaatg tcgttgagcg
     9301 tcgtcttgct tacgccatgc tgcgcaaact gggcgatggc agtttcaatc agttcttgcc
     9361 gggtcttcag agcttcggct ttggttcttt ttgccatgat taattattca ggaaataaat
     9421 atattcgaca cagggtgaga aaatagcgaa ggttaatcta tcatctaatg tgtatttata
     9481 cgagagggta acattgagtt gctataaatc gtcaaataaa caatgtatat tatttaccta
     9541 aaatacattc gccacatgaa tatatatttc aatttacgag gttttaattc tgcctctttc
     9601 aacccgcgtc aaaataaaac agtagaatat taatcttttt ttgtgtttat gtgccttgag
     9661 acgccagtat tcataactat tccttacatc gacgaatgat aatttgtagg atagcaaact
     9721 gtatttttct ttctgcgagt taacgcgttg cctttctggg taaataacgc gcttttggtt
     9781 ttttgaggaa tagtaatgac gaaacatgcc aggtttttcc tcctgccctc ctttattctg
     9841 atctccgcgg ctttaatcgc cggttgtaac gataagggag aagagaaagc tcacgtcggt
     9901 gaaccgcagg ttaccgttca tattgtgaaa acggccccgt tagaagttaa gactgaatta
     9961 ccaggccgca ccaatgctta ccgtatagcc gaagttcgcc cacaggttag cgggatcgta
    10021 ctgaatcgta atttcactga aggcagcgat gtacaagcag gccagtccct gtaccagatc
    10081 gatcccgcga cctatcaggc aaattataac agcgcgaaag gcgaactggc gaaaagtgaa
    10141 gccgccgccg ccatcgcgca tttgacggta aaacgttacg ttccgctcgt gggtacgaaa
    10201 tacatcagcc agcaggagta cgaccaggcc attgctgatg ctcgccaggc cgatgccgcc
    10261 gtgattgccg caaaaggcac agtcgaaagc gctcgcatca atctcgctta taccaaagtg
    10321 actgcgccaa ttagcggacg tatcggcaaa tcgaccgtga ccgaaggcgc tcttgtcact
    10381 aatgggcaaa cgactgaact ggcgactgtc cagcagctcg atcctatcta cgttgatgtg
    10441 acccaatcca gcaacgattt tatgaggctg aagcaatccg tagagcaagg aaatttgcat
    10501 aaggaaaacg ccaccagcaa cgtagagttg gtcatggaaa acggtcaaac ctatcccctg
    10561 aaaggtacgc tgcaattctc tgatgtgacc gttgatgaaa gcaccggctc cataacccta
    10621 cgtgctgtct tccctaaccc gcaacatacg cttttgccgg gtatgtatgt gcgtgcacgg
    10681 attgatgaag gcgtccaacc tgacgccatt cttatcccgc aacaaggcgt tagccgcaca
    10741 ccgcgtggtg atgcaaccgt gctgattgtt aacgataaaa gtcaggtgga agcgcgccct
    10801 gtcgttgcca gtcaggcgat tggcgataaa tggttgatta gcgaaggtct gaaatctggc
    10861 gatcaagtca ttgtcagcgg cctgcaaaaa gcgcgtccgg gagagcaggt taaagccact
    10921 accgataccc ccgcagatac tgcatcgaag taaggtaatc tgacatggca aactttttta
    10981 ttcgacgacc gatatttgca tgggtgctgg ccattattct gatgatggcg ggcgcactgg
    11041 cgatcctaca attgcccgtc gctcagtatc caaccattgc accgcctgcg gtttctgttt
    11101 cggcaaacta tccaggtgct gatgcgcaga ccgtgcagga tacggtgacg caggttatcg
    11161 aacagaatat gaatggtatc gataacctga tgtatatgtc ctccaccaac gattccgccg
    11221 gtagcgtgac aattaccctt accttccagt ccgggaccga tcctgatatc gcgcaagtgc
    11281 aggtgcagaa caaactccag ctcgccacgc cgttgctgcc gcaggaggtt cagcagcagg
    11341 ggatcagtgt tgaaaagtcc agtagcagct atttgatggt ggcgggtttt gtctctgata
    11401 acccaggcac cacacaggac gatatctcgg actatgtggc ctctaacgtt aaagatacgc
    11461 ttagccgtct gaatggcgtc ggtgacgtac agcttttcgg cgcacagtat gcgatgcgta
    11521 tctggctgga cgccgatctg ctaaacaaat ataaactgac accggttgat gtgattaacc
    11581 agttgaaggt acagaacgat cagatcgctg ccggacagtt gggcggaacg ccagcgttac
    11641 cagggcaaca gttgaatgcc tcgattattg ctcaaacgcg gttaaaaaat ccggaagaat
    11701 tcggcaaagt gaccctgcgc gtaaacagtg acggctcggt ggtacgcctg aaagatgtcg
    11761 cacgggttga acttggcggt gaaaactata acgttatcgc tcgtatcaac ggaaaaccgg
    11821 cggcgggcct ggggattaag ctggcaaccg gcgcgaatgc tctcgatacc gcgaaagcca
    11881 ttaaggcaaa actggcggaa ttacagccat tcttcccgca gggaatgaag gttctctacc
    11941 cttatgacac cacgccattc gtccagcttt ctattcacga agtggtaaaa acgctgttcg
    12001 aagccattat gctggtgttc ctggtgatgt atctgttctt gcagaatatg cgagcaacgc
    12061 tgatccccac cattgcggta cccgtggtgt tgttagggac gtttgccatc ctcgccgctt
    12121 ttggttactc catcaacaca ctaacgatgt tcgggatggt gcttgccatc gggctgctcg
    12181 tcgatgatgc gatagtggtg gtggagaacg tcgagcgcgt gatgatggag gataagctcc
    12241 cgccaaaaga agcgacggaa aaatcgatgt cgcaaattca gggcgcactg gtgggtatcg
    12301 cgatggtgct gtcagcggta tttattccga tggcattctt cggcggttct actggggcaa
    12361 tttatcgcca gttctctatc accatcgttt cggcaatggc actttctgtt ctggtggcat
    12421 tgattcttac ccctgcgtta tgtgcaacgc tgcttaaacc cgtctctgct gagcatcacg
    12481 aaaataaggg cggtttcttc ggctggttta ataccacctt cgatcatagc gttaaccact
    12541 acaccaacag cgtcggcaaa atcctcggtt ccacaggacg atatttactg atctatgcgc
    12601 tgattgttgc aggaatggtg gtgttgtttt tacgtcttcc gtcttccttc ttacctgaag
    12661 aggatcaggg tgtctttctg accatgattc agttacccgc tggcgcgacg caagagcgga
    12721 cgcaaaaagt gttggatcaa gtgacggatt actatctgaa gaacgagaaa gcgaacgttg
    12781 aaagtgtctt tacggttaac ggctttagct tcagcggcca ggcacaaaac gccggtatgg
    12841 ccttcgtcag tctgaaaccg tgggaagagc gtaatggtga tgaaaacagt gcggaagcgg
    12901 taatccatcg tgccaaaatg gaattgggca agatccgcga cggttttgtc attccattca
    12961 atatgccagc cattgttgaa ctgggcacgg caacgggttt cgactttgag ttaattgatc
    13021 aggctgggct gggtcacgat gccctaaccc aggcccgtaa ccagttgctt ggtatggcgg
    13081 cgcaacatcc tgccagctta gtcagcgtgc gtcctaatgg cctggaagac accgcgcagt
    13141 ttaaactgga agttgaccag gaaaaggcgc aggcattaag tgtttcactt tctgacatca
    13201 atcagaccat ttcaacggcg ttgggtggga cttacgttaa cgacttcatc gaccgtggtc
    13261 gcgtgaaaaa ggtgtatgtt caggcggatg ccaaattccg tatgctgcca gaagatgtcg
    13321 ataaacttta tgtccgcagc gccaacggcg aaatggtgcc attctcggcc tttaccactt
    13381 cacattgggt gtatggctct ccgcgactgg aacgctacaa cggtctgccg tcaatggaga
    13441 ttcaggggga agccgcgcca ggaaccagtt ccggcgatgc catggcgttg atggaaaacc
    13501 ttgcgtcaaa attacctgcg ggcattggtt atgactggac gggtatgtcg tatcaggaac
    13561 gcttatcggg aaaccaggct cccgctctag tagcaatttc ctttgtggtt gttttcctgt
    13621 gccttgctgc actctatgaa agctggtcaa ttcctgtctc ggttatgttg gtcgtgccgt
    13681 tagggattgt cggcgtgctg ctggcggcga cactctttaa tcaaaaaaat gacgtctact
    13741 ttatggtggg cttgctaacg acaattggct tgtcggccaa aaacgctatt ttgattgttg
    13801 agttcgctaa agatctcatg gagaaagagg gtaaaggtgt tgttgaagcg acactaatgg
    13861 cagtacgtat gcgtctgcgt cctatcctga tgacctctct cgcctttatt ctcggcgtat
    13921 taccgctagc tatcagtaac ggtgcaggca gtggcgcgca gaacgcagtg ggtatcgggg
    13981 taatgggcgg aatggtctct gcaacgttgc tggcaatctt cttcctaccg gtgttctttg
    14041 tggtgatccg ccgttgcttt aaaggataaa tcagaaacat aaaggcactt tcgggtgcct
    14101 ttattatttt cagtgaaacc cataaaaatt aataagatat tcttccactc actctttaaa
    14161 aactttctat agttcccgct cccttcacta tttttacaat tcacataatt tgtcattatt
    14221 cattccgcaa tatttataac ctccggtgat aaaatggcat tcagctcgtt aataagagag
    14281 ttaacttatt aagcgttagc gtttattact gaggtaacac catgaaaaga ttaattcctg
    14341 tggcattgct caccgcattg ctggcgggct gtgctcacga ttcgccctgc gttccggttt
    14401 atgacgatca gggttgtctg gttcacacca atacctgtat gaaaggcacg actcaggata
    14461 actgggaaac ggctggggct attgccggcg gggcagcggc tgttgctggc ctgacgatgg
    14521 ggatcatcgc tatgtcgaaa taactgaaca gggcgcggag tttcgcgctc tgtttaacga
    14581 tacagtat
//
LOCUS       DADMIB010000101        14564 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.101, whole genome shotgun sequence.
ACCESSION   DADMIB010000101 DADMIB010000000
VERSION     DADMIB010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14564
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.101"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..420
                     /locus_tag="JNZ89_002835"
     CDS             <1..420
                     /locus_tag="JNZ89_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY8936648.1"
                     /translation="LMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL
                     AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL
                     SIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR"
     gene            436..918
                     /locus_tag="JNZ89_002836"
     CDS             436..918
                     /locus_tag="JNZ89_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HAY8936649.1"
                     /translation="MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAG
                     DWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNE
                     GLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
                     "
     gene            complement(995..1342)
                     /gene="rplS"
                     /locus_tag="JNZ89_002837"
     CDS             complement(995..1342)
                     /gene="rplS"
                     /locus_tag="JNZ89_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HAY8936650.1"
                     /translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRE
                     RTGKAARIKERLN"
     gene            complement(1384..2151)
                     /gene="trmD"
                     /locus_tag="JNZ89_002838"
     CDS             complement(1384..2151)
                     /gene="trmD"
                     /locus_tag="JNZ89_002838"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HAY8936651.1"
                     /translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD
                     RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
                     ATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
                     GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
                     RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA"
     gene            complement(2182..2730)
                     /gene="rimM"
                     /locus_tag="JNZ89_002839"
     CDS             complement(2182..2730)
                     /gene="rimM"
                     /locus_tag="JNZ89_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HAY8936652.1"
                     /translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
                     QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE
                     EGDYYWKDLMGCQVVTTEDYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
                     GQVIKKVDLTTRSIEVDWDPGF"
     gene            complement(2749..2997)
                     /gene="rpsP"
                     /locus_tag="JNZ89_002840"
     CDS             complement(2749..2997)
                     /gene="rpsP"
                     /locus_tag="JNZ89_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HAY8936653.1"
                     /translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS
                     EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA"
     gene            complement(3134..4495)
                     /gene="ffh"
                     /locus_tag="JNZ89_002841"
     CDS             complement(3134..4495)
                     /gene="ffh"
                     /locus_tag="JNZ89_002841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HAY8936654.1"
                     /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA
                     LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV
                     VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
                     PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
                     FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
                     EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF
                     LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE
                     IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
                     PGR"
     gene            4587..5453
                     /locus_tag="JNZ89_002842"
     CDS             4587..5453
                     /locus_tag="JNZ89_002842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311501.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HAY8936655.1"
                     /translation="MQRLEQRSPDAILLLFLIAQTVDITMPVFALLALVAYSVSLALI
                     VPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSGQNLSLLNVGSLVSLMIC
                     TVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEATPGMLVHIGLSLFSY
                     ATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHITQIGVVLLTLTLCT
                     GLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLA
                     YFGSRIVQQLIS"
     gene            5474..6760
                     /locus_tag="JNZ89_002843"
     CDS             5474..6760
                     /locus_tag="JNZ89_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026171.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HAY8936656.1"
                     /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ
                     GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLT
                     FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIK
                     TDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGID
                     INDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA
                     DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS
                     PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT
                     RVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE"
     gene            complement(6815..7408)
                     /gene="grpE"
                     /locus_tag="JNZ89_002844"
     CDS             complement(6815..7408)
                     /gene="grpE"
                     /locus_tag="JNZ89_002844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HAY8936657.1"
                     /translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKI
                     ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL
                     DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
                     ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA"
     gene            7531..8409
                     /gene="nadK"
                     /locus_tag="JNZ89_002845"
     CDS             7531..8409
                     /gene="nadK"
                     /locus_tag="JNZ89_002845"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HAY8936658.1"
                     /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCKKGYEVIVEQQIA
                     HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT
                     DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
                     EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
                     RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
                     YFNTLSTKLGWSKKLF"
     gene            8495..10156
                     /gene="recN"
                     /locus_tag="JNZ89_002846"
     CDS             8495..10156
                     /gene="recN"
                     /locus_tag="JNZ89_002846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HAY8936659.1"
                     /translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL
                     CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR
                     SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT
                     ARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA
                     NSGQLLTTSQNALALMAYGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ
                     IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ
                     QLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQ
                     FTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALATQVITARK
                     METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
                     TDGAMTETHMQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA"
     gene            10305..10646
                     /gene="bamE"
                     /locus_tag="JNZ89_002847"
     CDS             10305..10646
                     /gene="bamE"
                     /locus_tag="JNZ89_002847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417107.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HAY8936660.1"
                     /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS
                     KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLT
                     NIDNKPALSGN"
     gene            complement(10708..10998)
                     /locus_tag="JNZ89_002848"
     CDS             complement(10708..10998)
                     /locus_tag="JNZ89_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HAY8936661.1"
                     /translation="MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT
                     DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK"
     gene            complement(10988..11464)
                     /gene="ratA"
                     /locus_tag="JNZ89_002849"
     CDS             complement(10988..11464)
                     /gene="ratA"
                     /locus_tag="JNZ89_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin RatA"
                     /protein_id="HAY8936662.1"
                     /translation="MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFL
                     PGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGG
                     WKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYSAR"
     gene            11596..12078
                     /gene="smpB"
                     /locus_tag="JNZ89_002850"
     CDS             11596..12078
                     /gene="smpB"
                     /locus_tag="JNZ89_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HAY8936663.1"
                     /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
                     RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
                     RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
                     "
     gene            12293..12655
                     /gene="ssrA"
                     /locus_tag="JNZ89_002851"
     tmRNA           12293..12655
                     /gene="ssrA"
                     /locus_tag="JNZ89_002851"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(12816..14564)
                     /locus_tag="JNZ89_002852"
                     /pseudo
     CDS             complement(12816..14564)
                     /locus_tag="JNZ89_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417134.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         3591 a         3912 c         3431 g         3630 t
ORIGIN      
        1 ttgatgaaca attccgatgc ccgaaaaacg tcggcgttac tatttcttga tggcgataat
       61 ttcaaatata tcaatgatac ctggggtcat gcgacgggcg atagggtctt gattgaaatc
      121 gcaaaacggt tagctgaatt tggcgggctg cgacataaag cataccgcct gggcggcgat
      181 gaattcgcta tggtgctcta tgatgtacag tcggaatctg aagtgcaaca gatatgctca
      241 gcactgacac aaatctttaa tctcccgttt gatcttcata atggccatca gaccaccatg
      301 acattaagca ttggttacgc gatgaccatt gagcacgcct ctgcggaaaa attacaagag
      361 cttgccgatc acaatatgta tcaggccaaa caccagcgtg ccgaaaagct ggtgagataa
      421 caaggatata tcgatatgat aaagcacctg gtagcccccc tgattttcac ctcactaata
      481 ctgactggct gccagtcccc tcagggaaag tttactcctg agcaagtcgc cgctatgcaa
      541 tcttatggat ttactgaatc cgccggcgac tggtcgctgg gcttatcaga tgccattctg
      601 ttcgcaaaaa atgactacaa attgctcccg gaaagccagc aacagatcca aaccatggca
      661 gccaaattgg cctcgacagg gctaacacat gcccgtatgg atggacacac cgataactat
      721 ggtgaagaca gttacaacga aggcttatca ttgaaacggg cgaatgtcgt ggccgatgca
      781 tgggctattg gtggacaaat tccacgcagc aatctcacca cacagggttt aggaaaaaaa
      841 tatcccatag ccagtaacaa gaccgcccag ggccgcgccg agaaccgccg cgtcgcagtg
      901 gtgattacaa ccccttaaaa cacgagcaaa cagacaaaaa aagggccagc caattggcca
      961 gcccttctta acaggatgtc gcttaagcga aatcttagtt aagacgctct ttgatacgag
     1021 cagccttacc agtacgctca cgcaggtagt acagtttagc tttacgaaca gcaccacgac
     1081 gtttgacaga aatgctgtca actaccggag agtgagtctg gaagacacgc tcaacgcctt
     1141 cgccgttgga aattttacga acagtgaatg cagagtgcag accgcggtta cgaatagcga
     1201 taaccacgcc ctcgaatgcc tgcagacgtt ttttggaacc ttcaacaacc catactttca
     1261 cttccacggt atcacccgga cggaaggaag gtacgtcctg cttcatctgc tcttgttcaa
     1321 gttgcttaat aatgttgctc ataatttaat ctcttatcct gggtaaactg atatctcggg
     1381 ggcttacgcc atcccatcat gtttatgttg ctgttgtgcg tgttccgttt tgaactccgc
     1441 cagcaacctt gcttgctctt cagtcagagc caggttttcc agaagttcag gtcttctaag
     1501 ccaggtacgg cccagcgact gtttcaaacg ccagcgacgt atctcggcat ggttgcccga
     1561 cagtaacact ggcggaactt ccatcccttc taacacctca ggccgcgtat agtgcgggca
     1621 atccagcaat ccttcagcaa aggaatcttc cgttgccgag gcttcatgtc ccagtacccc
     1681 cggaataaac cgggaaacgg agtcaatcag cgtcattgct ggtaactcac caccactgag
     1741 aacgtaatcg ccgattgacc attcttcgtc aatttcggtt tggatcacgc gctcatctat
     1801 accttcgtag cgaccgcaca ccagaatcaa tttttgattc gttgccaatt cgctgacgcc
     1861 cgcttgatca agcttgcgtc cctgtggtga cagataaatc acctttgcgc cttcacccgc
     1921 cgcggctttt gctgcatgaa tggcgtcccg caagggttgc accatcatta acatccccgg
     1981 tccgccgccg taaggacgat cgtccacggt acggtgccgg tcatgcgtga agtcgcgagg
     2041 actccagctc tggatgctca gcaggccatt tttaactgcc cggccagtta ccccgtaatc
     2101 ggtaattgcg cggaacattt caggaaacag gctaattatg ccaatccaca tagcgccgtc
     2161 ttttaccgtt tatccggtgg tttaaaaacc aggatcccaa tctacttcga ttgaacgagt
     2221 agtgagatcg actttcttga taacctgccc atcgaggaac ggtacgagac gttccttgat
     2281 accaaacgca tctttcaggt ttgccttaat gacgagaacg tcattagatc cggtttccat
     2341 catatcgacg actttaccga gatcgtagtc ttcagtggtt actacctggc agcccatcag
     2401 gtctttccag tagtagtcac cctcttcaag ctgaggcaac tgcgatgaat ccacgacaat
     2461 ttcacaattc gtcagcaggt tcgccgcatc acgatcgtca acgcctttca gcttgatgat
     2521 catgtcctga ttgtggtgct tccagctttc cagctggact tgctgccact gacccgcctt
     2581 ctggataaac cagggctgat agtcaaaaat gctttcggcg tcttcggtgg aagaaaacac
     2641 tctgagccac ccacgaatac cgtaagacga acccattttt cccaaaacga tgggatcaac
     2701 aggtgcttgc gcggtgagtt gtttgctcat catgaccacc gtgacagatt aagctgcttt
     2761 gtttacttct ttgatcagcg cagcaacgcg atcagaaata gttgcgccct ggccaaccca
     2821 gtgagcgatg cgatccagat ccaggcgagt gccttcttct ttttcgctag cgattgggtt
     2881 gaagaaacca acgcgctcga tgaagcgacc gttgcgtgca ttacggctgt cagcgacaac
     2941 aacctggtag aacggacgct ttttagcgcc gtgacgtgct aaacgaatag ttaccataac
     3001 atcctcttgt gtgaataaaa caaccggacc ccatcgagga acggagtccg gtgtcatatt
     3061 aaaagcccga aaattttact gatttctgga gaaaatgcaa tcagcagtta ataactctgt
     3121 cgcataaggt catttagcga ccaggaaatc ccggcggcat catccccttc atgcttctca
     3181 tcatcttcgc cattccgccc ttcttcattt tcttcatcat gcgctgcatg tcgtcgaact
     3241 gtttcagaag acggttaacg tcctgcacct gcataccgca accggcagca atacggcgtt
     3301 tacgcgaacc tttgatgatt tctggcttag cgcgctcttt catcgtcatc gagttgatga
     3361 tggcttccat acgcaccagc actttatcgt ccatctgtga cttgacgtta tccgggatct
     3421 gccccatgcc cggcagcttg cccatcaggc tggccatgcc gcccatattt ttcatctggc
     3481 gcagctgctc aagaaagtcg ttgagatcga agccgtcacc ttttttcagc ttgctggcta
     3541 atttctctgc ctgcgcgcgg tcaactttgc tttcgatatc ttcgatcagc gacagtacgt
     3601 cgcccatgcc gagaatacgc gacgcgatgc ggtccggatg gaacggctcc agcgcctcag
     3661 ttttctcgcc aacaccgagg aacttgatcg gtttgccagt gatgtgacga atagagagcg
     3721 ccgcaccgcc gcgggcatcg ccgtccactt tggtcaacac tacgccggta agcggtaacg
     3781 cttcattgaa tgcttttgcc gtattggccg catcctgacc ggtcatggcg tcaaccacaa
     3841 acagggtttc aaccgggtta atcgacgcat ggacttgttt gatctcgtcc atcatcgctt
     3901 cgtcaacgtg cagacgacca gcggtatcca ccagcagcac gtcgtagaat ttcagtttgg
     3961 cttctttcag cgccgcgtta acgatatcta ccggcttctg accaacatca gaagggaaga
     4021 aatcaacgcc cacctgctct gccagcgtct caagctgttt gattgccgcc gggcgataaa
     4081 cgtcggcaga aaccaccagc actttcttct tgtgcttctc gcgcaggaac ttaccgagtt
     4141 taccaacgct ggttgtttta ccggcacctt gcaggcccgc catcagcacg accgcaggcg
     4201 gttgcgccgc caggttcagg gtctggttct cttcgcccat cgccgcaacc agttcgttac
     4261 ggacgatttt gacgaactcc tgccccggcg tcaggctctt attaacttca tgaccaaccg
     4321 ctttctcttt tacgcgattg ataaactcac gcactaccgg cagagcgaca tccgcctcca
     4381 gcagcgccat gcgcacttcg cgcagcgtat cttttacgtt gtcttcagtt aggcgtccac
     4441 ggccactgat attgcgcagc gtgcgcgaca aacgatcggt taaattatca aacattgtct
     4501 ctcgcctggg gtggaaacgg ttggccgcaa tcgcgacaca tcatcagtat tttgccgcag
     4561 tataacatga aggcgtcttt gttgttatgc aacggttgga gcagcgttca cctgacgcta
     4621 tactgcttct ctttcttatt gctcaaactg ttgacatcac tatgcccgtt tttgctctgc
     4681 tcgcgcttgt cgcctactcc gtcagtcttg cgctgattgt tcccggtctg ctgcaaaaaa
     4741 acggcggctg gcggcgcatg gctattattt ctgcggtcat tgcgctggtc tgccacgcaa
     4801 tcgctctgga agcccgcatc ctgcccgacg gtgatagcgg acaaaacctc agcctgctga
     4861 acgttggttc attggtcagt ttgatgatct gtacggtaat gaccattgtg gcttctcgca
     4921 atcgtggctg gttgctgcta cccattgtct atgcctttgc gcttatcaac ctggcgctgg
     4981 cgaccttcat gcccaatgaa tacatcaccc atctggaagc aacgcctggg atgctggtgc
     5041 acattggctt atcgctcttt tcctatgcca cgctaattat cgccgccctg tacgcgctgc
     5101 aactggcgtg gattgattac caactgaaga acaagaagct ggcatttaac caggaaatgc
     5161 cgccattgat gagtatcgag cgtaaaatgt tccacatcac gcagattggc gtggtgctgc
     5221 taacgctcac gctttgcact ggcctgttct acatgcacaa cctatttagc atggaaaata
     5281 tcgacaaggc tgtgctctct atcgtggcgt ggtttgtcta tattgtgctg ctgtggggac
     5341 attaccatga aggatggcgt ggacgccgcg tcgtctggtt taacgttgcg ggcgcggtaa
     5401 ttctgacact ggcctacttc ggcagccgaa ttgtccagca gttaatcagc taaacccaga
     5461 aaaggagttt cccctggaac acatttctac tactacgttg atcattattc tgatcatcat
     5521 ggtggtcatt tcagcctatt tttccgggtc cgaaaccgga atgatgaccc tcaaccgcta
     5581 tcgtctgcga catatggcga aacagggtaa tcgctcggcc aaacgcgtcg aaaaattgct
     5641 gcgtaagcca gaccgcctga taagcctggt gttaatcggc aataacctgg tcaatattct
     5701 tgcctccgcg ctcggcacta ttgttgggat gcgtttgtac ggcgatgcgg gcgtggcaat
     5761 tgcgactggt gtgctgactt ttgtcgtact ggtatttgct gaggtattgc cgaaaaccat
     5821 tgccgcgctg tacccggaaa aagtcgctta tccgagtagt tttctgctgg ctccgctgca
     5881 aattttgatg atgccgctgg tctggttgct gaatgctatc acccgtatgc tgatgcgcat
     5941 gatgggtatc aaaaccgata tcgtggttag cggctctttg agcaaagaag agttgcgcac
     6001 tatcgtgcac gaatcacgct cacaaatttc ccgtcgcaat caggatatgc tgctgtcggt
     6061 gctcgatctg gaaaaaatga ccgttgatga catcatggtg ccgcgcagtg aaattatcgg
     6121 tattgatatc aacgatgact ggaaatcgat tctgcgccaa ctctcccact cacctcacgg
     6181 gcgcatcgtg ctctaccgtg attcgctgga cgacgccatc agtatgctgc gagtacgtga
     6241 agcctggcga ttgatgtcgg agaaaaaaga gttcaccaaa gaaaccatgc tgcgcgccgc
     6301 ggacgagatc tattttgtgc cggaaggtac gccgctcagc acgcagttgg taaagtttca
     6361 gcgcaacaaa aagaaagtcg gcctggtcgt caacgagtat ggagacattc aggggctggt
     6421 gacggttgaa gatattctgg aagagattgt cggcgatttc actacgtcga tgtcgccaac
     6481 acttgccgaa gaggtcacgc cgcaaaacga cggttcggtg attatcgatg gcaccgccaa
     6541 cgtgcgggaa atcaacaaag cctttaactg gcatctaccg gaagatgatg cccgcacggt
     6601 taatggcgtc attcttgagg cactggaaga gatccctgtc gcaggcaccc gcgtgcgtat
     6661 tggcgagtac gatatagata ttctcgacgt acaggacaat atgattaagc aggtaaaagt
     6721 ttttcctgtg aaaccgctgc gcgagagtgt ggcggagtaa cgaaaacggc cctgcattcg
     6781 catgcagggc cgtgaattat tacgaaaaca gaaattacgc ttttgctttc gctacagtta
     6841 ccatcgccgc acgaatcgta cgaccattca gcgtataacc cttctgcata atgcccagta
     6901 cgttacctgg cgcaacgtca tcagattcca ccattgcgat agcctgatgc acattcgggt
     6961 ccagcggcac gttagtttcg gcgatcactt caacaccaaa cttacgcaca acatccagca
     7021 tcgacttcag cgtcagctca atgccttcaa ccatcgcaga catatccggg ttagctttat
     7081 cagccacttc cagcgcacga tccaggctat caatcaccgg cagcaattcg ttgatgaatt
     7141 tctccagcgc aaatttgtgg gctttttcaa tatccagttc agtacgtcga cgcaggtttt
     7201 ccatttcggc ttttacacgc aaaatgccgt cacgttcacg ggtctgggct tcagccagct
     7261 gagcttcgag attcgcaatt ttttcatcgc gcggatccac ctgctcagca gaagcttctg
     7321 gctcaactgc ctcaatctct tcgtgctgat ccatgataat ttcttccggg gcttgcccct
     7381 caggcgtttt ctgttcttta ctactcatga atttctccgc gtttttttcg cattcatctc
     7441 gctaacttcg cttattatgg ggatcagttt cagggtttca agggaagcac tcacattgtc
     7501 atcaatcttc gcaacaagga cctcggaaaa atgaataatc atttcaagtg tattggcatt
     7561 gtgggacacc cacggcaccc cactgcactg acaacacatg aaatgctcta ccgctggctg
     7621 tgcaaaaaag gttacgaggt catcgttgag caacaaatcg ctcacgaact gcaactgaag
     7681 aatgtgaaaa ctggcacgct cgcggagatt gggcaactag ctgatctcgc ggtagtcgtt
     7741 ggtggcgacg gtaatatgct gggcgcggca cgcacactcg cccgttacga tattaaagtt
     7801 attggaatca accgtggcaa cctgggtttc ctgactgacc ttgaccccga taacgcccag
     7861 caacagttag ccgatgtact ggaaggccac tacatcagcg agaaacgttt tttgctggaa
     7921 gcgcaagtct gtcagcaaga ttgccagaaa cgcatcagca ccgcgataaa tgaagtggtg
     7981 cttcatccag gcaaagtggc acatatgatt gagttcgaag tgtatatcga cgagatcttt
     8041 gcgttttctc agcgatctga tggactaatt atttcgacgc caacaggctc caccgcctat
     8101 tccctctctg caggcggtcc tattctgacc ccctctctgg atgcgattac cctggtgccc
     8161 atgttcccgc atacgttgtc agcacgacca ctggtcataa acagcagcag cacgatccgt
     8221 ctgcgttttt cgcatcgccg taacgacctg gaaatcagtt gcgacagcca gatagcactg
     8281 ccgattcagg aaggtgaaga tgtcctgatt cgtcgctgtg attaccatct gaatctgatt
     8341 catccgaaag attacagtta tttcaacaca ttaagcacca agctcggctg gtcaaaaaaa
     8401 ttattctaat tttacgccag cctctttact gtatataaaa ccagtttata ctgtacgcaa
     8461 taacagtaat ggtttttcat acaggaaaac gactatgttg gcacaactga ccatcagcaa
     8521 ctttgctatc gttcgtgagc ttgagattga ttttcatagc ggcatgaccg taataactgg
     8581 cgagaccggc gcgggtaaat ctattgcaat agatgccctc ggtctttgtc tcggtggtcg
     8641 cgctgaagcc gacatggtgc gtaccggcgc tgctcgcgct gacctgtgcg cccgtttttc
     8701 tctgaaagat acgccagcgg ctctgcgctg gctggaagaa aatcagcttg aagacgggca
     8761 tgaatgtttg cttcgtcgcg taatcagcag cgatggtcgc tcccgtggtt tcatcaacgg
     8821 tacagctgtt cctctgtcac aactgcgcga actgggtcag ttgctgattc agatccatgg
     8881 tcagcacgct catcaattac tcaccaaacc tgagcaccaa aaattcctgc ttgatggcta
     8941 tgccaatgaa acctctctac tgcaggaaat gaccgcacgt tatcagttgt ggcatcaaag
     9001 ctgccgtgac ctcgcgcatc atcaacagtt aagtcaggaa cgcgccgccc gtgcggaact
     9061 gctgcaatac caattaaaag aacttaacga atttaatccg cagcccggag agtttgaaca
     9121 aatcgacgaa gagtacaaac gtctggcgaa cagcggtcaa ttgctgacca ccagccagaa
     9181 tgcattggca ttaatggcct acggtgaaga cgcaaacctg caaagtcagc tttacacggc
     9241 taaacaactg gtgagcgaat tgattggcat ggacagcaaa ctgtccggcg tacttgatat
     9301 gctggaagaa gctaccatcc agattgctga agccagcgat gaactgcgcc actactgcga
     9361 tcgtctggat ctcgatccca accgactatt tgaacttgaa cagcgcatct caaaacagat
     9421 ttcgctggca cgtaaacatc acgtcagccc tgaggcattg ccacagtatt accagtcgct
     9481 actggaagaa cagcagcaac tggacgatca ggccgactca caagaaacgc ttgcgctggc
     9541 ggtaacgaaa catcatcagc aggcactgga aatcgcgcgc gcattacacc aacaacgcca
     9601 gcaatatgca gaagaacttg cacagctgat caccgacagt atgcatgcgc tctcaatgcc
     9661 gcatgggcag tttacgatcg atgttaaatt tgacgagcat cacctgggcg ctgacggtgc
     9721 cgatcgtatt gagtttcggg taaccaccaa cccaggtcag ccaatgcagc ctattgccaa
     9781 agtcgcatcc ggtggtgaat tgtcccgcat cgcactggca acccaggtca tcacggcgcg
     9841 taaaatggaa accccggcac tgatttttga tgaagtggat gtagggatta gcggtccaac
     9901 agcggcagtt gtcggcaaac tgctgcgtca actcggcgaa tcaactcagg tgatgtgtgt
     9961 tacccacctg ccacaagtcg cgggatgtgg tcatcaacac tattttgtca gcaaagaaac
    10021 cgatggtgcg atgacagaaa cgcatatgca atccctgaat aaaaaagcgc ggttacaaga
    10081 gctggcgcgc ctgcttggtg gcagtgaagt cacacgtaat acactggcga atgcgaaaga
    10141 actgcttgca gcgtaaactt ttttcctgct tcacggtcag agtaaacagc aaaacgccgt
    10201 aagaccggaa agcaaaaggt tttaaagtga tgaaaggtct attatcatcg gcatattaca
    10261 gatgagccac gtactgctag ggcccgaaaa ggaatcaaat cactatgcgc tgtaaaacgc
    10321 tgactgctgc agcagcagta ctattgatgt tgaccgcagg ctgttccact ctggagcgag
    10381 tggtttaccg tcctgacatc aaccagggga actatctgac cgctaacgac gtatccaaaa
    10441 tacgtgttgg catgacgcaa caacaagttg cgtacgcatt gggtacaccg ctgatgtccg
    10501 atccatttgg tacgaatacc tggttctatg tcttccgcca gcaaccaggt catgaaggtg
    10561 taacgcagca aacgctgacg ctgaccttta acagtagcgg tgtgttgacc aatattgata
    10621 acaaacctgc gctgagtggt aactaataat aaagttgctc tcaaagacgt taaaaaaggt
    10681 gctcaatgag cacctttttt ctgtctgtta tttattcgct gatttttctg ctcgttgcct
    10741 gcgaagctct ttcggatcgg caatgagagg gcgataaatc tccacccgat cgccatcatg
    10801 cacactatcg cttagttttg ccggacggct gtaaatgccg actttgtttt tagttaaatc
    10861 gatatcggta cgcaattcca gcaagccact ggcgcgaata gcttcttcaa ccgtcgcgcc
    10921 ctcctgcagc gtcacgcgct gcaggtactg cttctcaggt agcgcataag ccacctcaac
    10981 ggcaatttta cctggcactg taaacctctt tcgcacgaac cgtaaaagcc tggaccatat
    11041 tagacgccag ctctttaaac acgcgaccaa aggcgagttc aatcaactta ttggtaaact
    11101 caaagtcgag atgaaactcg atacgacacg cctcctggct cagcggcgta aacttccatc
    11161 caccaatcaa tttcttgaac ggcccatcca ccagattcat aagaatactt tggttactgg
    11221 tcaactggtt gcgggtagta aacgttttgc tgatcccagc cttagagaca tctaccgccg
    11281 cagtcatctg cccaggagtg gactccagaa tccgacttcc ggtacaaccc ggcaaaaact
    11341 gaggataaga ctgaacgtca ttcactaact gatacatttg ctccgcgctg tagggtacca
    11401 gtgcggtccg gctaatctga ggcataacta tttccatcaa caaaaatcca acaaataata
    11461 tcatttatcc tgctgtaaaa aaaacgctat cccggcgctg ggtaacatcg ggttcatgct
    11521 aagatagagc cttgtccccc gcaggattga tatggggtgt tttcgatttc agattaccga
    11581 tgattcacga cgcttatgac gaagaaaaaa gcacataaac ctggttcagc gaccatcgcg
    11641 cttaacaagc gcgcccgtca cgaatacttt atcgaagaag agttcgaagc gggacttgcc
    11701 ctgcaaggct gggaagttaa atccctgcgc gcaggaaaag ccaatatcag cgacagctac
    11761 gtccttctgc gtgacggaga ggcatttctg tttggcgcta acatcacgcc aatggccgtg
    11821 gcctccacgc atgtggtgtg cgatcctacc cgtacccgca agttacttct caaccagcgc
    11881 gaactggact cattgtacgg tcgcgtcaat cgagaaggct ataccgtagt ggcgctctcc
    11941 ctgtactgga aaaatgcctg gtgcaaagtg aaaatcggcg tcgccaaagg taaaaaacag
    12001 cacgataaac gttcagatat caaagaacgc gaatggcagg tggataaagc acgtatcatg
    12061 aaaaacgccc accgttaaac ctgcactcca attattgacc agttcctcac cgcgcctccc
    12121 tctccggcgg cgcgaatgaa catcttattg gctatcacat ccgacacaaa tgttgccatc
    12181 ccattgctta atcgaataaa aatcaggcta catgggtgct aaatctttaa cgataacgcc
    12241 attgaggctg gtcatggcgc tcataaatct ggtatacttg ccgttacaca ttggggctga
    12301 ttctggattc gacgggattt gcgaaaccca aggtgcatgc cgaggggcgg ttggcctcgt
    12361 aaaaagccgc aaaaaatagt cgcaaacgac gaaaactacg ctttagcagc ttaataacct
    12421 gcttagagcc ctctctccct agcctccgct cttaggacgg ggatcaagag aggtcaaacc
    12481 caaaagagat cgcgtggaag ccctgcctgg ggttgaagcg ttaaaactta atcaggctag
    12541 tttgttagtg gcgtgtccgt ccgcagctgg caagcgaatg taaagactga ctaagcatgt
    12601 agtaccgagg acgtaggaat ttcggacgcg ggttcaactc ccgccagctc caccaatcat
    12661 gattggacgg tataaggaca acaccaataa aaacaggagg ttagcagtct cagcaggaca
    12721 ccgaccagac ggtgaagaga cataaaagga tacgcaaagg agccgcggct cctggtgaca
    12781 tgaaagccca cagatgtggg ctttttcgtt gatggtcaga acgaccagtt cacaccagct
    12841 accccgttcc acggggattc cacaccggca ccatggctat accccacccc aagatgcccg
    12901 cttaacgtac tgctgaatga ggctttaata cctgcctggt atattccacg tctgcccgac
    12961 aaatcattga cgaaattacc gtcactattc actttcaccc ggttatcatc gacaaattct
    13021 ttgcgcacag ccgccttcag ccacggctca acttccatac cgttccccag acgcatgttg
    13081 taactcagcg ttgcacccag ttcacgatat aaacctgcgg gtatcgactg atttcgattc
    13141 catgccattg gataaatgat attcagggtt atcagcggtg accccccgtt aacgatgcat
    13201 acggcgtcag gttccagtta ccatcggtaa atcgcatccc ggtttcaatg tgaccgccca
    13261 gcccgttgct gcgataactg ccgttggtgg ctccaccgct gccaaccgtg gagtcgcgag
    13321 cttcggtacc tgctaatacc aataaattac cgccattttc cagcaacata ttggtcgcta
    13381 aattgccgga aatggaaaaa gtgccgtact ggtaagtacc gctgatttca ataccgttag
    13441 ccgtgctcgt ctggagagcg gcaccgctgt tctggacgat atctgtcgct ttgccattat
    13501 cgttaactgt cagcgtaccg ccttcattga tctttgtttt tattgcctct ccgttagctg
    13561 aaactgtttg tattccgccg tcgttaatcg ttgtctcatt cgccaccccc tcgacgattt
    13621 gttcgccgcc ggtgagcgtc gtgcctgtcg cagtggcttt tgttttgacg atctcccgtc
    13681 cgcccgtatt gacctgtgtt ttgtcagaag aggtgtctga ctccacggtt aacacgccgc
    13741 catttgccag caggatattg ttcgccgcac cctgctcgat gctgaacgcg acgccatccg
    13801 cgcgtgttcc tgtgacccgc gtcgccctgg tggttgcaac caaagcgccc tggctactct
    13861 gctgtatccc cgttgcgctg cctttctccc gcacatcgag tgtgccgccg tcattaagca
    13921 ccgagttttc agccagaccg ccctcattaa ctacctgtga acccccatta ataatggaac
    13981 cttccgctgt cccgtttgcc ataatttgtt gtaggccaga gacgatatcg gtattgattg
    14041 ccttaccata attctgaacg gtttgcgtgc caccattgat gtgtgttttc tctgttgacc
    14101 caccatcaac aatttgttca ccactttcga tatttgcctc agtggctaat ccatataccg
    14161 tttgcttgcc acctttgata tttgctttat cagaagtggc actggcatat attgtttggg
    14221 tgccagcact attgagtaca gtgccaacat cttttccata aacatccatt ttgccgttgg
    14281 cattaataat cgtatcaact gcccgggaac cagtgacgac tgttaatgag ccagcgtttt
    14341 ccagcactac atttttagct tctgaattcc tgatgtagaa agcatcacca taactgttgg
    14401 ttcctttgat aagggttccg gaagttgtgg aagcaattaa tgcgccgccg gattgttgct
    14461 caacatgctt agcctcacca ccgtcctgaa cctccagaac gccaccatta ttaagtctgg
    14521 tggtatctgt tttagcctcc ttctggacaa tcagcttacc gcca
//
LOCUS       DADMIB010000102        14563 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.102, whole genome shotgun sequence.
ACCESSION   DADMIB010000102 DADMIB010000000
VERSION     DADMIB010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14563
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.102"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..209)
                     /locus_tag="JNZ89_002853"
     CDS             complement(<1..209)
                     /locus_tag="JNZ89_002853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY8936664.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVE"
     gene            complement(280..2394)
                     /gene="fusA"
                     /locus_tag="JNZ89_002854"
     CDS             complement(280..2394)
                     /gene="fusA"
                     /locus_tag="JNZ89_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HAY8936665.1"
                     /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT
                     RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW
                     HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ
                     AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
                     FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
                     TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
                     EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ
                     SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL
                     AGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
                     EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
                     EFLKYDEAPSNVAQAVIEARGK"
     gene            complement(2491..2961)
                     /gene="rpsG"
                     /locus_tag="JNZ89_002855"
     CDS             complement(2491..2961)
                     /gene="rpsG"
                     /locus_tag="JNZ89_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006714698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HAY8936666.1"
                     /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
                     SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW"
     gene            complement(3058..3432)
                     /gene="rpsL"
                     /locus_tag="JNZ89_002856"
     CDS             complement(3058..3432)
                     /gene="rpsL"
                     /locus_tag="JNZ89_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003852912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HAY8936667.1"
                     /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
                     DCSGVKDRKQARSKYGVKRPKA"
     gene            complement(3558..3845)
                     /gene="tusB"
                     /locus_tag="JNZ89_002857"
     CDS             complement(3558..3845)
                     /gene="tusB"
                     /locus_tag="JNZ89_002857"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HAY8936668.1"
                     /translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
                     ESLRNAPIKVYALNEDLIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW"
     gene            complement(3853..4212)
                     /gene="tusC"
                     /locus_tag="JNZ89_002858"
     CDS             complement(3853..4212)
                     /gene="tusC"
                     /locus_tag="JNZ89_002858"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HAY8936669.1"
                     /translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV
                     FQLLSGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
                     ADALRRELANYDVILRF"
     gene            complement(4212..4598)
                     /gene="tusD"
                     /locus_tag="JNZ89_002859"
     CDS             complement(4212..4598)
                     /gene="tusD"
                     /locus_tag="JNZ89_002859"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HAY8936670.1"
                     /translation="MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYRGGV
                     YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
                     LQPGFTLSGLGALAEASLTCDRVVQF"
     gene            complement(4598..5320)
                     /locus_tag="JNZ89_002860"
     CDS             complement(4598..5320)
                     /locus_tag="JNZ89_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8936671.1"
                     /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
                     SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
                     RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
                     SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
                     SKHTVYLYIRQFKSGDFQGQDK"
     gene            complement(5487..6299)
                     /gene="fkpA"
                     /locus_tag="JNZ89_002861"
     CDS             complement(5487..6299)
                     /gene="fkpA"
                     /locus_tag="JNZ89_002861"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003827768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY8936672.1"
                     /translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKND
                     DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
                     QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
                     PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
                     IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
     gene            6520..6738
                     /locus_tag="JNZ89_002862"
     CDS             6520..6738
                     /locus_tag="JNZ89_002862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HAY8936673.1"
                     /translation="MQDLSLEARLAELESRLAFQESTIEELNVTVTAHEMEMAKLRDH
                     LRLLTEKLKASQPSNIASQAEETPPPHY"
     gene            complement(6787..7377)
                     /gene="slyD"
                     /locus_tag="JNZ89_002863"
     CDS             complement(6787..7377)
                     /gene="slyD"
                     /locus_tag="JNZ89_002863"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HAY8936674.1"
                     /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
                     LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
                     GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
                     DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
     gene            complement(7472..7672)
                     /locus_tag="JNZ89_002864"
     CDS             complement(7472..7672)
                     /locus_tag="JNZ89_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheV family putative metal-binding protein"
                     /protein_id="HAY8936675.1"
                     /translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
                     ADKEARDHVRKDEQVIGIFHPD"
     gene            complement(7682..9493)
                     /gene="kefB"
                     /locus_tag="JNZ89_002865"
     CDS             complement(7682..9493)
                     /gene="kefB"
                     /locus_tag="JNZ89_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefB"
                     /protein_id="HAY8936676.1"
                     /translation="MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGP
                     WGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALL
                     AGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAV
                     IPALALVPLLAGSADEHFDWMKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFT
                     AATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFI
                     SVGMSLNLGVLYTHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGG
                     EFAFVLFSTASSQRLFQGDQMALLLVTVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEE
                     DEKPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY
                     GDATQVDLLRSAGAEAAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHE
                     LLQAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHA
                     DTVQISRAREARRELEEIFQREMQQERRQLDGWDEFE"
     gene            complement(9493..10044)
                     /gene="kefG"
                     /locus_tag="JNZ89_002866"
     CDS             complement(9493..10044)
                     /gene="kefG"
                     /locus_tag="JNZ89_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     ancillary protein KefG"
                     /protein_id="HAY8936677.1"
                     /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
                     PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
                     KYWRNVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
                     KELANHARAYGDWLANPLSPGGR"
     gene            10175..12088
                     /locus_tag="JNZ89_002867"
     CDS             10175..12088
                     /locus_tag="JNZ89_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY8936678.1"
                     /translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
                     ALLKNEISADGGSYTFPGSWQLAWVNQETPALSQAALEYVIDGDREYRQLEAQLHDAN
                     ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
                     IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
                     QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
                     SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
                     DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
                     LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
                     EQLEQMLLEGQSN"
     gene            12088..13110
                     /locus_tag="JNZ89_002868"
     CDS             12088..13110
                     /locus_tag="JNZ89_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY8936679.1"
                     /translation="MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFT
                     PYWQRLELPDGDFVDLAWSEAPAQARHKPRLVIFHGLEGSLNSPYAHGLVEAAQKRGW
                     LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
                     CLLAKEGNDLPVDAAVIVSAPFMLEACSYHMEKGFSRVYQRYLLNLLKANAARKLAAY
                     PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
                     AKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
                     LEAKSC"
     gene            13104..13322
                     /locus_tag="JNZ89_002869"
     CDS             13104..13322
                     /locus_tag="JNZ89_002869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HAY8936680.1"
                     /translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
                     QLQCGEAVLVWSELHETVNIMPRSQFRE"
     gene            13376..14245
                     /locus_tag="JNZ89_002870"
     CDS             13376..14245
                     /locus_tag="JNZ89_002870"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HAY8936681.1"
                     /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
                     HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD
                     EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE
                     WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA
                     AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
                     PLVQRLMEGKKIE"
     gene            complement(14300..>14563)
                     /locus_tag="JNZ89_002871"
     CDS             complement(14300..>14563)
                     /locus_tag="JNZ89_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HAY8936682.1"
                     /translation="SAIDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIV
                     TGRDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
BASE COUNT         3599 a         3971 c         3587 g         3406 t
ORIGIN      
        1 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
       61 atctggtcga atgcacgagc agcaccgccg taggttttag ccagtacggt ggtgattgca
      121 gcggtcagag tagttttacc gtggtcaacg tggccgatag taccaacgtt aacgtgcggt
      181 tttgtacgtt caaatttttc tttagacacg gctatattcc ttactatagt gctctcccct
      241 tcaggagaga gcacgggact ttggtattaa cccttaggct tatttaccac gggcttcaat
      301 tacggcctga gcaacgttac tcggcgcttc atcatacttc aggaattcca tagtgtatga
      361 tgcacgacct ttggtcagag aacgcagctg agttgcgtat ccgaacattt cagacagcgg
      421 tacttcagcg tggatcttaa cgccagtaac ttcagattcc tgacctttga gcataccacg
      481 acgacggctc aagtcaccga taacgtcacc ggtgttctct tccggagttt ctacttcaac
      541 cttcatgatc ggctcaagca gaactggttt cgctttctta aagccttctt taaaggcgat
      601 agaagcagcc agtttaaacg ccagttcaga ggagtcaacg tcatggtaag aaccgaagtg
      661 cagacgaata cccatgtcta ctaccgggta gcctgccagc ggacctgctt tcagctgttc
      721 ctggatacct ttatcaacgg ccgggatgta ttcgccaggg attacaccac ctttaatgtc
      781 gttgatgaac tcgtagcctt tcgggtttga acccggctcc agcgggtaca tgtcgataac
      841 aacatgacca tactgaccac gaccaccaga ctgtttcgcg tgtttacctt caacatcggt
      901 aactttctgg cggatagttt cacggtaagc aacctgcggt ttacctacgt tcgcttcaac
      961 gttgaattca cgcttcatac ggtcaacgat gatgtcgagg tgcagttcgc ccatacccgc
     1021 gatgattgtc tggttagatt cttcgtcagt ccatacacgg aaagacgggt cttctttagc
     1081 cagacggccc agagccagac ccattttttc ctggtcagct ttggttttcg gttcaactgc
     1141 gatggagatt accggctcag ggaattccat acgttccaga atgatcggcg catccgggtc
     1201 acacagggtg tcaccagtgg ttacgtcttt cagaccgata gcagcagcga tgtcgcccgc
     1261 gcgaacttct ttgatctctt cacgtttgtt agcgtgcatc tgaacgatac gaccgaaacg
     1321 ctcacgtgca gctttcacgg agttcagtac ggtatcacca gagttaacca caccggagta
     1381 aacacggaag aaggtcaggt taccaacaaa cgggtcggta gcgattttga acgccagtgc
     1441 agagaacggc tcgtcatcac ttgcgtgacg ttcagccgga gtgtctttac cgtcgtccag
     1501 gataccgttg atcgcaggta cgtcaaccgg ggatggcagg taatcaatta ccgcatccag
     1561 catcgcctga acacctttgt tcttgaacgc agaaccacag gttaccagga tgatttcgtt
     1621 gttcagaacg cgctgacgca gagcaccttt gatttctgct tcagtcagtt cttcaccacc
     1681 caggtatttt tccatcagct cttcagaagc ttcagctgcg gattcgatca ggttctggtg
     1741 ccattcgtta gccagttcaa ccatgtctgc cgggatatct tcgtattcga aggttacgcc
     1801 ctggtcagcg tcgttccagt taatagcttt cattttcacc aggtcaacaa caccggtgaa
     1861 atgttcttca gcaccaatcg ccagctgcag cggaaccgga ttcgcgccca gacgggtttt
     1921 gatctggtta acaactttca ggaagttcgc acccatgcgg tccattttgt taacgaacgc
     1981 aatgcgcgga actttatatt tgtttgcctg acgccatacg gtttcagact gcggctgaac
     2041 accaccaact gcgcagtaaa ccattaccgc accatcgaga acacgcatgg aacgttctac
     2101 ttcgattgtg aagtcaacgt gccccggggt gtcgatgatg ttgatgcgat gcggctcata
     2161 ctgcttagcc ataccagacc agaatgcagt agtcgcagcg gaagtgatgg taataccacg
     2221 ttcctgctcc tgctccatcc agtccatggt tgcagcgccg tcatgaactt cacctatttt
     2281 atggtttaca ccggtgtaga acagaatacg ttcggtagta gtggttttac cggcgtcgat
     2341 gtgcgcactg ataccgatgt tacggtagcg tgcgatgggt gttgtacgag ccatttgttt
     2401 cctcgtttat cttttaggcg ttcaatttaa gtagcccaaa gcgggctgct tactggaagc
     2461 gcccgcctgg tgactaaaac tccgaaggga ttaccaacgg tagtgtgcga acgccttgtt
     2521 ggcttcggcc atacggtgaa cgtcttcacg tttcttaact gcagtacctt tgttttctgc
     2581 agcatcagaa agttcgttcg ccaggcgcag agccatggat ttatcaccgc gtttacgagc
     2641 agcttcaacg atccaacgca ttgccagagc attacgacga accggacgga cttcaactgg
     2701 tacctgataa gtagaaccac caacgcggcg agacttaact tctacagtcg ggcgcacgtt
     2761 ttcgagagct acttcgaatg cttccagttc agatttacca gagcgctgag ccagggtctc
     2821 cagcgcgctg tatacgatag attcagcagt agatttttta ccatctacca tcaggatatt
     2881 tacaaattta gccagcagtt ctgatccgaa cttcggatcc ggcagaattt tacgctgacc
     2941 aatgacgcga cgacgtggca tggaaatact ccgttgttaa ttcaggattg tccaaaactc
     3001 tacgagttta gtttgacatt taagttaaaa cgtttggcct tacttaacgg agaaccatta
     3061 agccttagga cgcttcacgc catacttgga acgagcctgc ttacggtctt taacgccgga
     3121 gcagtcaagc gcaccacgta cggtgtggta acgaacaccc gggaggtctt taacacgacc
     3181 gccacggatc aggatcacgg agtgctcctg caggttgtga ccttcaccac cgatgtagga
     3241 agtcacttcg aaaccgttag tcagacgaac acggcatact ttacgcagcg cggagttcgg
     3301 ttttttagga gtggtagtat atacacgagt acatacgcca cgtttttgcg ggcatgcttc
     3361 cagcgcaggc acgttgcttt tcgcaacttt gcgagcacgt ggtttgcgta ccagctggtt
     3421 aactgttgcc attaaatagc tcctggtttt agcttttgct tcgtaaacac gtaataaaac
     3481 gtcctcacac aatatgagga cgccgaattt tagggcgatg ccgaaaaggt gtcaagaaat
     3541 atacaacgat cccgccatca ccaggccatc tggctggagt gcttaaccgt aagtctgacg
     3601 aaatcagtat agtcaatggg aatgatgtcg ttcgaaattt gaccagtcaa accgcgggca
     3661 ataaggtctt cgttcagggc atagacctta atgggggcat tacgcagact ttcaaggtag
     3721 cggttaccgt caactgcggc agttacgcca tcttgcaata atagcagttc gtctccttca
     3781 ctgagcagac gcagcagcgc agcaaaatcc gtcagccagg gtgaacgatg taacgtgtgc
     3841 agcataaacg cctcaaaacc tcaaaataac atcgtagttg gcgagttcgc ggcgtaaggc
     3901 atctgcttcg agcggcgtgg cttcgacaac aaagggtgtc tgcggatcta acccgcgttc
     3961 gcgcagtgaa gccgcacaaa cccagcactg ttcaatgtcg tacagaccca acaatttaaa
     4021 agtggcaatg taatcacgcg ccagcactgc atcgggcttt tgtcctgaca gcagctgaaa
     4081 aacgccatca gcaataaaga agacggccag atcgtcagtt aatgcggaag ttgccagtaa
     4141 agcatctaaa ccttcccgac cagcagctgt accatgaggt gcagtagaaa aaacaaacgc
     4201 aattcgtttc atcagaactg taccaccctg tcacaggtca gcgaggcttc cgccagcgcg
     4261 ccaagtccgc ttaaggtaaa tcccggctga aggtttgacg aagccagccc cagccttcct
     4321 gcttcagttt catcgacgat accgcggcgt aacgctgccg ctacgcagat attcagcgcc
     4381 acaccatgtt gcgcattcaa ctgttgccag ccgcgcacaa ggtcaaattc gtcacttgcc
     4441 ggtgaggtca attggttagc gttatagacc cctccccgat agaaaaagac gctgcttaac
     4501 tcatggcctt ctactatcag cgcctgcgca aactgaaaag cactactcgc ctgttgcgta
     4561 ccgtatgctg gcccggtcac cacgatggca aaacgcatta cttatcttgc ccctggaaat
     4621 caccgctctt gaactggcgg atgtagagat agacagtgtg tttggagatg ttcaggcggt
     4681 cagcaacctg gttgatcgca tctttaatat cgaagatccc tttctcgtag agattcagca
     4741 cgatctgacg atttttggcg ttattagaaa cattgcgatc ggcattcact tcttcgatgg
     4801 tgaactccag cgtttgggta accagatctt caacagaaga ggcaaagttg acgcttgaac
     4861 cgacatccgg ggtttctggc ggcacaaaag tgctcataat ctgcgagaag ggaacatcaa
     4921 gattcatatt gatgcacagc agaccaatta cacgctgttc gcggttacga atcgcgatag
     4981 tcagggactt cattaatacg ccgcttttgg cgcgagtaaa gtagcattta gaaacgctgc
     5041 tatccgctcc cgtcatatcg tgcagcatac gtagcgccag gtcagtaatt ggcgaaccaa
     5101 tcttccggcc tgtatgttca ccgttagcaa tgcgaatggc tgaacatttt agatcctgca
     5161 aagagtgcaa aacgatttca cagtgggagc caataagcat cgctaacccg tccaccaccg
     5221 cttcgtagga tttcagaata tcaaaatcgg tctggtcgaa aggacgttga tccagtaaat
     5281 ccaactcact ggtttcgttg gttaaaagcg acctggacat gaaaaaaaac actccttttc
     5341 aggagcctgt cgttaacttt tcagggcagg ctcattaatg atgcgggtaa ctaaattaat
     5401 acagcggagg ttccgctttc cagcactaat tatatccggc ctgtaataaa aaaaccgccg
     5461 cctggtcagg cggcggttct taatgcttat tttttagcag aatctgcggc tttcgcatca
     5521 gcttccggct ttgcatcagc cttcggtgct ggtttcacat ccagcagctc tacgtcaaac
     5581 accagggtag aattcggtgg gatccccgga acacccgctt tgccgtaagc cagttctggt
     5641 ggaataacca gtttgatctt accgcctttc ttgatgttct tcagaccttc tgtccaaccc
     5701 gggataacac cgtccagacg gaaagaaagc ggttcaccac gggtgtaaga gttgtcgaac
     5761 tctttaccgt cgatcagcgt acctttgtag ttcactacaa cagtatcgct gtctttcggt
     5821 gcttcgcctt taccggcttc tactacctga taaaccagac cagttgaaga ggttttcaca
     5881 cctttctctt tggcaaattt ctcgcggtac tctttacctt ttgcttcgtt atcagccgcg
     5941 tctttttcca tcttcgcctg agcagaagac ttcacgcgag cttcgaatgc ttgcagagtc
     6001 tgttcgatct cttggtcgga gagtttgctc ttatcagcaa atgcatcctg aacaccagcg
     6061 atcagctgat ctttatccag tttgatgccc agtttttctt gttctttaag agagttttcc
     6121 atgtaacgac ccagcgaagc acccagtgca taagctgatt tctgatcgtc atttttgaac
     6181 gctgctttgc tgtcagcagt tgtagcaggt tttgcagctt cagcagcaaa agtgattggt
     6241 gcatgcaggg caacggccat tgtggtcgcc agcagcgtta ctttaaacag tgatttcatc
     6301 catatctcca ggatcggggc atctcacccc agggttaact attatcagaa gggtactata
     6361 aagcgttgtc gaacaaatct acatacagac acgccctatt atcatctatt ttcagactct
     6421 ttttgtttaa attagtttcg atgaccgcga aatgagtgct gtctcgggca gcaaagttaa
     6481 gtagaatccg cggcaaccat tcgacaaaag aggtgaatca tgcaggattt atcattggaa
     6541 gcacgcctgg cagagctgga gagccgactg gcttttcagg aaagcaccat tgaagaactg
     6601 aacgtcacgg tgaccgctca tgaaatggag atggcgaaac tgcgcgatca tctgcgtctg
     6661 ctgaccgaga agttaaaagc cagccagccg tcgaacatcg cgtcgcaggc tgaagaaacg
     6721 ccaccgccac attattgagg cgtaaaaaaa gcggggattc cccgcttttt tgtcaccttt
     6781 tcggtattag tggcaaccac aaccgccgtt gcctttaccg ccacagcagc cttcgccacc
     6841 gtgttcatga ccgtgatcgt ggccatgacc gccgcagcaa ccgtcgtggt cgtgatcgtg
     6901 gtgatgatcg tgcgcgccgt gaacgtgacc atgagccagt tcttcttcgg tcgcttcacg
     6961 aatcgccaca acctcaacgt tgaatttcag gttctgaccg gccagcatgt ggttaccatc
     7021 aaccactacg tgatcgtctt caaccgcagt gatttcaacc ggtaccggcc cctggtcggt
     7081 ttcagccagg aaacgcatac ctacctgcag ttcatcaacg cccataaata cgtctttagg
     7141 aacacgttgc accaggtttt cgtcgtactg accgtaagcg tcgttcgcgc caacagcgac
     7201 atcaaatttg tcgccaactt catgaccttc cagcgccgtt tccaggccag agatcaggga
     7261 accgtgacca tgcaggtagt ccagcggcgc actcaccgga gactcatcaa ccaacacacc
     7321 gtcttctgta cgtacctgat aggccaggct gaccaccagg tcttttgcta ctttcatgat
     7381 atctcctgag catgggaaga atagtggcgc agattgtagc ggaattctgc agccgtgtac
     7441 tcactagctt aaaaaaactc ggcgcatatc gctagtccgg atgaaaaatc ccgatcactt
     7501 gctcatcttt gcgaacgtga tcgcgggctt ctttgtctgc ttctcgcatc tgatgtccgc
     7561 acttaacgca ttcaacaata tcaatattat tttcgcgcca catcgccatt gaatcctgtg
     7621 cctgacaggc cgggcatttt gcgcccgcaa taaaacgttt tcggattgcc atctttaccc
     7681 tctactcaaa ttcatcccag ccgtccagct ggcgtcgttc ttgttgcatt tcacgctgga
     7741 aaatctcttc cagttcgcgt cgggcttccc tggcgcgaga aatttgtaca gtatcggcat
     7801 gcattgggat gagctctcgc agcatccgca tatccaggcg gcgaaaatgc agttgcgccc
     7861 gctgcgcctg atgcggatgc atcccaagcg tgaccaaagt cttgcgcccc agctctaacg
     7921 cactggagaa tgtttcacgg gaaaactgcg tcacccctgc ctgtaataac tcatgcgctt
     7981 ccacacgtcc gcgcgctcgc gcaagaatat gcaaatgcgg aaagtgctgc tggcatattt
     8041 ccaccagctt catggtgtct tccggctcgt tacaggtaat gacgatagac tcagcggcct
     8101 ctgcacccgc agaacgtaat agatcgacct gcgtggcgtc gccgtaataa actttgtagc
     8161 catatttacg catcaggtta acggcgctga tatcccgctc cagcacggta atgcgcattt
     8221 tatttgccat cagcaaacga ccaatcacct gaccaaaacg cccgaagccc acgacaatga
     8281 cctggggttt atcatcgttg acccacggtt tttcgtcttc ttcttccggt ccgttaaact
     8341 ggcgggataa ccatttatcc accagcttca tcagcaacgg cgtggtcatc atggaaagcg
     8401 tcaccgtcac cgtcaccagc aacagcgcca tctggtcgcc ctggaataaa cgttgtgaag
     8461 aagcggtaga aaagaggaca aaggcaaact caccgccctg actcaacacg ccagcaaact
     8521 gcatccgctc tgagctacgc acgccataca atcgcgccag cagatacagc acgagaattt
     8581 tcaccgccac cagcacaacc acgcttatca ctacccacaa cagatgggta taaagcaccc
     8641 cgaggttgag cgacatgccg acagagataa agaacaaacc gagcagcaag cctttgaagg
     8701 gatcgatagc cgtttccagt tcatggcgat attcactttc cgccagcagc acgcccgcaa
     8761 taaatgtacc gagcgccatc gacagcccca gcgcatccat aaacaatgcg gaacccaaca
     8821 ccagcagcag cgtcgcggcg gtgaacactt cccgcacgcc agaagctgca ataaagcgga
     8881 ataccggacg cagtaaatag cgcccaccaa tcagcatgcc gacaaacgcc agcaccttca
     8941 tgccgatctt catccagtcg aaatgttcgt ctgccgaccc cgccaacaac ggcactaacg
     9001 ccagtgctgg gatcactgcc agatcctgaa acagcagaac cgaaaacccg agctggccgg
     9061 attcgctgcg attcatccct ttctcacgca tcaattgcaa cgccattgca gttgaagaca
     9121 tcgcaaggcc aatgccaccg accaccgccg cctgccaggc gaaatccgtc agcatcaata
     9181 atcccgccag caacgccgcg cttaacagca cctgtgccgc gcctacgcca aaaatcgaac
     9241 gccgcagttg ccaaagtttg gagggattca actcaaggcc gatgataaac atcaggaata
     9301 ccacgccgag ttccgaaaag tggaggatct catcgacgtc gctaataaac cccagccccc
     9361 acgggccaat tgcaatccct gccagcaaat atcccaacac agcgccaatc cccagccgcg
     9421 atgccaacgg caccgcagcc accgccgcga agagaaacag cactcctgcg agtaaaaaat
     9481 cggaaccttc catcagcggc ctcctggaga cagcggattt gccagccagt caccgtaggc
     9541 tctggcgtgg ttcgccagct cctttgcgct ttgccgtctc gcccagtaaa taatgatggg
     9601 acttaaccaa tgcatccggc acatgcccgc cgccagttca aaggggcgca gcacatcgct
     9661 catcgggtag cgattcagcg cgtcataacg gtaagcactt tccggctcgc cggtggtaat
     9721 cacgttacgc cagtactttc ccgccagttg gtttcctccc ggcccgctgg caaaaccacg
     9781 acttaatacc cggtccagcc actctttcag tagcgccggg cagctatagg tataaagagg
     9841 atgctgaaag acaatcacct cgtgctcgcg cagtaatgcc tgctcacggg ggatatcaat
     9901 aaaaaaatcg ggatagtgcg cgtaaaggtc gtgcacggta acattgctga gctgcgtggc
     9961 cggtttaagc agtacccggt ttgccaccga gtcctgagat tccggatggg catacagcag
    10021 caaaactttc gctggctgag acatcatccc cctcccggta tggtttttgt gtatagtcgc
    10081 tgttttgggc taccattgcg cccggtgcgg cagctcgccc atacattaca ttatcataat
    10141 gataagttaa catagtctga acatacggcg ccttatgatt gttttctcct cgttacaaat
    10201 tcgtcgcggc gtgcgcgtcc tgctggataa tgccaccgcc accatcaacc ctgggcagaa
    10261 agtcggcctg gtgggtaaaa acggctgtgg taaatctacc ctgctggcat tgctgaaaaa
    10321 tgaaatcagc gccgacggcg gcagctacac ctttccggga agctggcaac tggcgtgggt
    10381 gaatcaggaa acgccggcgt tatcgcaagc ggcgctggaa tatgtcattg acggcgaccg
    10441 tgaatatcgt caactggaag cgcagctgca cgacgccaac gaacgtaacg acgggcacgc
    10501 cattgcgacc attcatggca agctggatgc tattgacgca tggagtattc gctcccgtgc
    10561 cgccagcctg ctgcacggcc tcggtttcag caatgaacaa ctggagcgcc cggtaagtga
    10621 tttctccggt ggctggcgta tgcgtcttaa ccttgcccag gcgctgattt gccgttcaga
    10681 cttgctgctg ctcgacgaac cgactaacca cctcgatctc gatgccgtta tctggctgga
    10741 aaaatggttg aagagctatc aaggcacgct gatcctgatc tctcacgacc gcgacttcct
    10801 cgatccgatc gttgataaaa ttattcatat cgaacaacaa agcatgttcg agtacaccgg
    10861 caactacagt tcgtttgaag tacagcgcgc cacccgtctg gcgcaacaac aagcgatgta
    10921 tgaaagccag caggaacgcg tggcacatct gcaaagttat atcgaccgtt tccgtgccaa
    10981 agccaccaaa gcgaagcaag cccagagccg cattaagatg cttgagcgta tggagctgat
    11041 tgcccccgcg cacgtcgaca acccgttccg ctttagcttc cgcgcgccgg aaagcctgcc
    11101 aaatccgtta ctgaagatgg aaaaagtcag cgcgggctat ggcgatcgca ttattctcga
    11161 ctcgattaaa ctgaacctgg tgcccggctc gcgcattggt ctgttaggcc gcaacggcgc
    11221 gggtaaatcg acattaatca aactgttagc cggtgaactt gcgccagtca gcggtgaaat
    11281 tggtctggcg aaagggatca agctcggcta cttcgcccag catcaacttg aatacctgcg
    11341 cgccgacgaa tcacctattc aacatctggc acgtttagcg ccgcaggagc tggaacaaaa
    11401 actgcgtgac tacctcggcg gctttggttt ccagggcgat aaagtaaccg aagaaacgcg
    11461 ccgcttctcc ggtggggaaa aagcccgcct ggtgctggca ttaattgtct ggcagcgtcc
    11521 gaatctgctg ctgctcgacg aaccgactaa ccaccttgac ctcgacatgc gtcaggcact
    11581 caccgaagca ttaatcgagt ttgaaggcgc gctggttgtc gtttcgcacg accgtcattt
    11641 gctgcgttcc accactgacg atctctacct ggttcacgat cgtaaagtcg aaccgttcga
    11701 cggcgatctg gaagattatc aacagtggtt gagcgacgta caaaagcagg aaaaccagac
    11761 cgacgaagcg ccaaaagaga acgcgaacag cgcccaggca cgtaaagatc agaagcgtcg
    11821 ggaagcggag ctgcgtgcgc aaacccagcc gctgcgtaaa gagattgccc gtctggaaaa
    11881 agagatggag aagctgaacg cgcaactggc gcaggcggaa gagaaactcg gcgacagcga
    11941 actgtatgac cagagccgta aagcggagtt gaccgcctgc ctgcaacagc aagccagcgc
    12001 caaatccggc ctggaagagt gcgaaatggc gtggctggaa gcccaggagc agcttgagca
    12061 gatgctgctg gaaggccaaa gcaactgatg gcgcagataa cgacgaccga tgccaatgaa
    12121 ttcagcagca gtgctgaatt cacccctatg cgcggcttta gcaattgtca tctacaaact
    12181 atgctgccgc gtttgtttcg tcgtcaggtg aaattcaccc cgtactggca gcggctggag
    12241 ttgcccgacg gcgattttgt cgatctcgcg tggagtgaag cccctgcaca ggctcggcat
    12301 aaaccgcgtt tagtgatatt tcacgggctg gaaggcagtc tcaatagccc ttacgcccac
    12361 ggtctggttg aggcggcgca aaagcgcggc tggctgggcg tggtgatgca ttttcgcgga
    12421 tgcagcggtg aaccaaaccg tatgcaccgc atttaccatt cgggcgaaac cgaagacgcc
    12481 agttggtttt tacgctggct gcaacgcgaa tttggtcatg cgccaacggc tgccgtcggc
    12541 tattcgctcg gcggtaatat gctggcctgt ttgctggcaa aggaaggcaa tgatctcccg
    12601 gttgatgcgg cggtgattgt ctctgcgccg tttatgctgg aagcctgtag ctatcatatg
    12661 gaaaagggct tttcccgcgt ttatcagcgt tacttgctga acctgttaaa agccaatgcc
    12721 gcgcgcaagc tggcagccta ccccggaacg ctgccgatta atctcgcgca gttaaaatcg
    12781 gtacgtcgca tccgtgaatt tgacgatcta atcaccgcca gaattcacgg ctacgccgac
    12841 gctatcgact attatcgtca gtgtagcgcc atgccgatgc tgaaccggat cgccaaaccg
    12901 acgctgatta ttcacgccaa agacgatccg tttatggatc atcaggtgat cccgaaaccg
    12961 gaaagtctcc cctcgcaggt ggagtatcaa ctgactgaac atggcggtca tgttggcttt
    13021 attggcggta cattacttca tccgcaaatg tggctggagt cacgcattcc tgactggtta
    13081 acaacgtatc tggaggcgaa atcatgttga ttccgtggca agacctctcc cccgaaacgc
    13141 tggaaaattt aattgaaagc tttgtgttac gtgaaggcac cgattatggt gaacatgagc
    13201 gtacacttga acagaaagtc gccgacgtca aacgccagct acagtgcgga gaagcggtgc
    13261 tggtatggtc ggagctgcac gaaacggtca atattatgcc gcgcagtcag tttcgcgaat
    13321 aacctgcaac cgtcggcgga cgagataata atgatagcta agtcatggag ttactatgtc
    13381 tgccaaacat ccggtcattg cggtaacagg atccagcggc gcggggacca ccaccaccag
    13441 cctcgcgttt cgtaaaatat tcgcgcagtt aaatctgcat gcagctgagg tggaaggcga
    13501 cagttttcac cgttacaccc gcccggaaat ggacatggcg atccgcaaag cgcgcgacgc
    13561 cgggcggcat atcagctact tcggccccga agcgaacgac ttcggcctgc tggaacaaac
    13621 cttcattgaa tacggtcaga gcggcaaagg gaaatctcgc aaatatctgc atacctacga
    13681 cgaagccgta ccgtggaatc aggtaccggg aacattcacc ccctggcaac ctttaccaga
    13741 acccactgat gtactgtttt atgaaggttt acacggcggc gtagtcacgc cacagcataa
    13801 cgttgcgcag catgtggact tactggtcgg cgtagtgcct atcgttaacc ttgagtggat
    13861 tcaaaaactg atccgcgaca ccagcgagcg cgggcactca cgagaagcag tgatggactc
    13921 agtagtgcgt tcaatggaag actatatcaa ctacatcaca ccgcagtttt cccgcaccca
    13981 tcttaacttc cagcgcgttc ccaccgtcga cacttcaaac ccgttcgcgg caaaaggtat
    14041 cccgtcgctg gatgaaagct ttgtggtgat ccattttcgt aatctggaag ggatcgattt
    14101 cccctggctg ctggcgatgt tgcaaggctc attcatttcc cacatcaata cgttagtggt
    14161 accgggcggc aaaatgggtc tggcaatgga attaattatg ctgccgctgg tgcaacgatt
    14221 gatggaagga aagaaaatcg agtaactctg ctattacgcc ggataaaata ctatccggct
    14281 tcacaacggg atagttaaat cacgcggcaa ccacttcata cgagtgagta atattcaccg
    14341 ctttttccag catcaacgcc actgaacaat atttctcggc agagagatca accgcacgcg
    14401 caaccgctgc gtctttcagg tcgcgaccgg tgacgataaa atgcagatta atgtgcgtaa
    14461 acaggcgtgg tgcctcttcg cggcgttcag aggtcaattt tacttcacaa tcgaccacat
    14521 cctgacgccc tttttgcagg atcgaaacca catcgatggc act
//
LOCUS       DADMIB010000103        14526 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.103, whole genome shotgun sequence.
ACCESSION   DADMIB010000103 DADMIB010000000
VERSION     DADMIB010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14526
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.103"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..1264)
                     /locus_tag="JNZ89_002872"
     CDS             complement(<1..1264)
                     /locus_tag="JNZ89_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936683.1"
                     /translation="MSTTTRKFKTIITDTGAKKLAQVAAPDGKPVRLTHMAVGDGGGT
                     LPTPDSKQTRLVHEVWRHTVNRVILDATHQNRIIAELVIPPETGGFWIREIGVFDEHG
                     DLIAVGNTAESYKPAVAEGSGRAQTFRTILTVSSTATVALTVDNTMVMATVDYVDDKL
                     KEHEQSRRHPDASLTAKGFVQLSSATNSVSETQAATPKAVKAAYDLANGKYTAQDAST
                     TRKGLVQLSSATNSTSETQAATPKAVKAAYDLANAKYTAQDATTAQKGIVQLSSATNS
                     TSETLAATSKAVKAVMDETNKKAPLNSPALTGTPTTPAARQGTNNTQIASTAFVMAAI
                     AALVDSSPDALNTLNELAAALGNAPNFATTMTNALAGKQPKDATLTALAGLATAADRF
                     PYFTGNDVASLATLTKVGRDILAKSTVAA"
     gene            complement(1267..1797)
                     /locus_tag="JNZ89_002873"
     CDS             complement(1267..1797)
                     /locus_tag="JNZ89_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HAY8936684.1"
                     /translation="MSNSLLPPSASNFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHL
                     LPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHKGTISALRRAIEPLGYLIRVSEW
                     WEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFA
                     AAATYDGEVITIYPGD"
     gene            complement(1790..2686)
                     /locus_tag="JNZ89_002874"
     CDS             complement(1790..2686)
                     /locus_tag="JNZ89_002874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY8936685.1"
                     /translation="MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVS
                     AALELESEPLNVIAQTMSFREMLLRQRVNEGARACMLSHSAGTDLDNLAGNMNTKRLV
                     ITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPS
                     PANVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLY
                     FYPGPESEPILAAAESSFRKWLAEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNM
                     AISDIQAARCASFTISEGGRNE"
     gene            complement(2690..3040)
                     /locus_tag="JNZ89_002875"
     CDS             complement(2690..3040)
                     /locus_tag="JNZ89_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY8936686.1"
                     /translation="MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYG
                     SLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVM
                     QTMQNVELTITLRE"
     gene            complement(3037..3618)
                     /locus_tag="JNZ89_002876"
     CDS             complement(3037..3618)
                     /locus_tag="JNZ89_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HAY8936687.1"
                     /translation="MSAELMRLLSNIIRTGIISEVDEKSWRVRVRSGELETGWLRWNT
                     SRAGAFNVWLPPSPGEQVVIACIGGNPETAMIIGSLWSDAIPAPGKSLKEIVVSAPDG
                     AVFRYDADAGALSASGMKTATLQASVSVTLDTPVVECTDLLRTATLDVTKGGKMSGNI
                     THSGGNFTSNGITVHTHKHGGVKGGSDSTGGPQ"
     gene            complement(3615..4250)
                     /locus_tag="JNZ89_002877"
     CDS             complement(3615..4250)
                     /locus_tag="JNZ89_002877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HAY8936688.1"
                     /translation="MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIR
                     PQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNS
                     IRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA
                     RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERLIYNTVLGRIAEAVR"
     gene            complement(4243..4710)
                     /locus_tag="JNZ89_002878"
     CDS             complement(4243..4710)
                     /locus_tag="JNZ89_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936689.1"
                     /translation="MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFV
                     YRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADL
                     LFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG"
     gene            complement(4848..5255)
                     /locus_tag="JNZ89_002879"
     CDS             complement(4848..5255)
                     /locus_tag="JNZ89_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000780564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HAY8936690.1"
                     /translation="MKLWPTLGVAFLLTAGWGTSMRLSWSLGRENARNEAQASTLKST
                     ADTLNIISAGVQDMQQVLAQLRVENQQRNQDGEVRREQLRNDIAKDECAHALPDARFT
                     DRLRRHAERATASAVSPAYTADADHTGNASPLP"
     gene            complement(5252..5644)
                     /locus_tag="JNZ89_002880"
     CDS             complement(5252..5644)
                     /locus_tag="JNZ89_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HAY8936691.1"
                     /translation="MSNTFKFSSRSEKNLQGVNPDLVKVTRRALEISEVDFGITEGLR
                     SRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQMSWEWPLYEKIAAAFRQASREL
                     NIPVEWGGDWKTLKDGPHFQLPHGAYPA"
     gene            complement(5641..5964)
                     /locus_tag="JNZ89_002881"
     CDS             complement(5641..5964)
                     /locus_tag="JNZ89_002881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY8936692.1"
                     /translation="MSTIQTGITEQVIAWLFDHLPTVYAVGAAVSISALMSLYDGRTL
                     VQTVTGSLACGVLAMAVAGSLRFFGFPEDAVTFIGASIGFMGAEKARDKVIAAFNRRV
                     KEKDE"
     gene            complement(5967..6167)
                     /locus_tag="JNZ89_002882"
     CDS             complement(5967..6167)
                     /locus_tag="JNZ89_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936693.1"
                     /translation="MKVKALEGDTVDSLCFRYYGTTQGVTEKVLDANPGLCQQVFLDA
                     GQEVEMPEPEKKKREMIQLWGE"
     gene            complement(6167..6661)
                     /locus_tag="JNZ89_002883"
     CDS             complement(6167..6661)
                     /locus_tag="JNZ89_002883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HAY8936694.1"
                     /translation="MTIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAV
                     RLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWH
                     WRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIF
                     AELC"
     gene            complement(6829..7575)
                     /locus_tag="JNZ89_002884"
     CDS             complement(6829..7575)
                     /locus_tag="JNZ89_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004983471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HAY8936695.1"
                     /translation="MITPAQQHWQNVMAQRAGRANEGVDHAARTAHEEVLYRLRLAQA
                     RLKGVQARSAKAAIKKELLPDFSGWIEGTLEADGGQQDEVIATLMVWAIDCGDLPLAL
                     RIGAYVVRHNLIMPDNFGRTAATVLTEEICNPVLTQAGTDADADLSAFIEPLDTLREI
                     VTDQDMPDEVRAKLCKACAFARRGLSDADSMALSLKLLREAMHLNPNAGVKREIATLS
                     RALKKADSAAEPEDASAQQAQDESSKKQQK"
     gene            complement(7621..8493)
                     /locus_tag="JNZ89_002885"
     CDS             complement(7621..8493)
                     /locus_tag="JNZ89_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005136493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HAY8936696.1"
                     /translation="MIGVTDQKGEKILLDTTGPIARTNTSYDGTKRRNPNNVVDLKNR
                     KYQCEQVNYDTFISYPQLDAWSAHPDFQSRISAQIARQVALDRIMIGFNGTSHADESN
                     FSTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHAGKYANADALVQDAR
                     SSLLDEWHKEADDLVVIMGRNLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGL
                     GVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVEDY
                     GKCAMVTGLKFADS"
     gene            complement(8490..8672)
                     /locus_tag="JNZ89_002886"
     CDS             complement(8490..8672)
                     /locus_tag="JNZ89_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005054714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid protein"
                     /protein_id="HAY8936697.1"
                     /translation="MNLVMSDITRNKLGCYMAQQVSLNNIPVSALVSRFTVEPAVQQR
                     FENASKESTEFTKKIT"
     gene            complement(8696..9532)
                     /locus_tag="JNZ89_002887"
                     /pseudo
     CDS             complement(8696..9532)
                     /locus_tag="JNZ89_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001262634.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
     gene            9687..11438
                     /locus_tag="JNZ89_002888"
     CDS             9687..11438
                     /locus_tag="JNZ89_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY8936698.1"
                     /translation="MIQDAFVRQRARQLYWQGYPPAEISRLMGINPNTIYAWKKRDQW
                     DETPPGQRVTQSIDARLIQLTEKQNKTGGDFKEIDLLTRQLKKLHDGQPDVMAAGKKG
                     RAKKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRNRMILKSRQIGAT
                     WYFAQEALLMALRDDVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAEVDVELKGGDKI
                     ILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATLSGLRRTYFS
                     TPSTETHEAYAYWNGDRWNEKKASHKRQRFSVDWKTLHNGLICPDRTWRQIVTLEDVV
                     NHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNILIGCGVDGYDDWKDWKP
                     FAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPSVPGGRFRTVETRRVQGLEFEEQ
                     ARVIEEFTCRYNVEHIGIDVTGGNGEAVYQIVKRFFPAAIPYTFTLSSKRSLVLKMLQ
                     IMRAGRWEYDRAERELVAAFNAVRKVKTPGGFITYETDRARGISHGDLAWATMLAVIN
                     EPIGGEGENERFTVMEF"
     gene            11438..12474
                     /locus_tag="JNZ89_002889"
                     /pseudo
     CDS             11438..12474
                     /locus_tag="JNZ89_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000087802.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            complement(12953..13543)
                     /locus_tag="JNZ89_002890"
     CDS             complement(12953..13543)
                     /locus_tag="JNZ89_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY8936699.1"
                     /translation="MSEINYQALRERYSPVPVPKCPICGEEMSIQRISGAQVVYACSG
                     YGDDGDFKIGRTLADKHYEKSRVTVLDVGDPEVLALLDWLETKDNRIAELEKIATDYA
                     LKFQKAQDALKHAALLHSRTAQQTNNFAVSLPDISEYFINDVFQPLRYERDVERAIIK
                     AGGKALWQEKHEDRTHQSCDVNCGWFSPLTTDKNNT"
     gene            complement(13607..13918)
                     /locus_tag="JNZ89_002891"
     CDS             complement(13607..13918)
                     /locus_tag="JNZ89_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012907691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein"
                     /protein_id="HAY8936700.1"
                     /translation="MTTPTRRISFYLKPTAVKNEGEACAWLDSLTPEARKSGQRVAFL
                     AGLALLKMNPAEAYRLAAWAGDEALSVTQTRTERPASQPVSTAQITSQMAGNIRALFP
                     E"
     gene            complement(13923..>14526)
                     /locus_tag="JNZ89_002892"
     CDS             complement(13923..>14526)
                     /locus_tag="JNZ89_002892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="stability/partitioning protein"
                     /protein_id="HAY8936701.1"
                     /translation="RKKANVMRPVEYQNGEAFTIRNVQVMPESIPAGFKALADMSPFE
                     SLLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSHHIA
                     NTIIEHRHDEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAVFSGYGRVMVVG
                     GGAEIVAPAIREACGVNATFIADGVPQFALVNGLYAMDKE"
BASE COUNT         2950 a         4047 c         4005 g         3524 t
ORIGIN      
        1 cggcagcaac ggtcgatttc gcaagaatat cccgcccgac ttttgtcagg gttgccaggc
       61 tggcgacatc attccccgta aaatacggaa acctgtctgc cgcagtagca agcccggcca
      121 gcgccgtcag ggtggcatct ttcggttgct tacccgcaag cgcgttagtc atggtggtcg
      181 caaaattcgg ggcgtttccc agcgccgccg ctaactcgtt cagcgtattc agtgcgtcag
      241 gtgacgaatc tacaagggcg gcaatcgcag ccataacgaa agccgtgctt gcgatttggg
      301 tattattcgt tccctgtcgc gcagctggcg ttgttggcgt tccggtcagc gcaggactgt
      361 ttaagggcgc tttcttgttc gtttcatcca ttaccgcctt aaccgctttc gatgtcgcgg
      421 ccagtgtttc agacgtgctg ttggtggcac tactgagctg gactatccct ttttgtgccg
      481 tcgtggcgtc ctgagcggta tattttgcgt tagcaaggtc atacgcggcc tttactgctt
      541 tcggcgttgc agcctgcgtt tcagacgtgc tgttggtggc gctactgagc tggacaaggc
      601 cttttcgcgt cgtgctggca tcctgcgcag tatatttacc gttagcaaga tcatacgcgg
      661 cctttactgc tttcggcgtt gcagcctgcg tttcagacac gctgttagtg gcgctactga
      721 gttgaacaaa gccttttgcg gtcagcgagg cgtccgggtg acgtcgtgac tgttcatgct
      781 ctttcagttt gtcatccacg taatccactg tggccatcac catggtgttg tccacggtaa
      841 gcgccacggt ggcagtgctg gatacggtca gaatggtgcg aaatgtttgt gcacgaccgg
      901 acccttcggc aacggctggc ttgtaacttt cggcagtatt tcccaccgcg attaaatcgc
      961 cgtgctcatc aaatacacca atttcccgga tccagaatcc gcccgtttca ggaggaataa
     1021 ccagctccgc aataatgcgg ttctgatgtg ttgcgtccag gatgacgcga ttaacagtat
     1081 gtcgccacac ctcatgcacc agacgggtct gcttactgtc tggtgtgggc aacgtgccgc
     1141 caccgtcgcc cacggccata tgagtcaggc ggacaggctt accatctggc gcggctacct
     1201 gagctaattt ttttgcaccc gtatcggtga taatggtttt aaattttcgt gttgtggtac
     1261 tcatgcttaa tcgcctggat aaatggtaat aacttcaccg tcataagttg ccgccgctgc
     1321 gaaaatatcc cccggaattt cctgaatgat attcagccct gtcatgtggc ggctgaccgg
     1381 gcgggcatca gcaatcaacc gctccatttc cagatacatt tcctccgtca cgccactgtc
     1441 cagcgtgccg acttcaacgg taaatgttcc cggttctccg ccgaactccc accactcaga
     1501 cacgcgaatg aggtatccca gcggctcaat ggcccggcgc agtgcgctga tggtcccttt
     1561 gtgtcggtgt atcagccatg catcacgaat aacctgtcgc tttgtctctt ccggccagtt
     1621 gcgatcccag cggtcaacgg aaaacgccca ggcgagataa ggcagcagat gcaccgggca
     1681 ggtgtccggc gaccacagcg tgttgaggtc taccggaatg tctgtaatgc gtgttccgac
     1741 ggcttcggca caacgcatga aattgctggc tgatggtggt aacaacgaat tactcattgc
     1801 gtccaccttc gctgatggtg aatgacgcac agcgcgccgc ctgtatgtcg ctgatggcca
     1861 tattctgtgt gggttcgatt atctccacgc gttgcacacc gtgcacatgc agtgcggcag
     1921 caatggcgga caacgccacg tcctgaccga taagcccctg ctcagccagc cacttcctga
     1981 acgacgattc agccgcggcc agaataggtt cggattccgg gccggggtaa aagtacagtt
     2041 ttgcattcag ccgccatgtc acgattctgg cactctgtac ggtcaggcgg tcggccaccg
     2101 ggcgggtatc ctctgcattc agaacggcgc gaacggtatt aagcaacgcc tccgttgctg
     2161 tgccgtcgcc ctcagtggac aggatggaaa ccgtcacgtt ggccggagac gggctgatgg
     2221 cccgcgcatc gcgtaccaga ccgctggcgc tgcgtgcaaa atactcgtat gcacctgacg
     2281 ggccagcaac actcagaccg tcatatgccc gttgcgcccg tagtctcagc gaggtgtcac
     2341 tttccatcac tgcatcggtg gtatccgttg ccggagtgat aaccaggcgc tttgtgttca
     2401 tattgcccgc gaggttgtcc aggtctgtcc cggcgctgtg gcttagcatg caggcgcgtg
     2461 caccctcatt gacccgctgg cgtaacagca tttcacgaaa cgacatggtt tgagcgataa
     2521 cgttaagggg ttccgattcc agctccagcg cggcggaaac ggcttcacgc tgttcggcgg
     2581 gataggacgc aatcatcatg gcctttgtgt cagccagaat tgcctcaaag tcaggctccg
     2641 cgatgatggc gggttccggt aactgtgaaa ggtcaacggc aggcatgatt tactccctca
     2701 gcgtgatggt taattcaaca ttctgcatgg tctgcatgac agtgcccgac agcgtcaccc
     2761 cggcgcggcc tcctgccttc cagacaacgt cgatagcgtc cagggcaatg cggggttccc
     2821 atcgtgtcag cgcaatcacg gcagcactca tgcattgcag acgcgtggtg ttattcatgg
     2881 gttcgtcaat caaatcaggc acaaggctgc catattcccg tcgcataacc cggcttgcca
     2941 gcggggtggt caggatgtcc ctgactgact gtttcaggtg ctccatatcg ttcaggtttc
     3001 ccgttccgtc cgggttcatt cctgtgtagc gggttgtcac tgcgggcctc ctgtcgaatc
     3061 gctgccacct ttaacgccac cgtgtttatg cgtatgcact gtgatgccgt ttgaggtgaa
     3121 attaccgccg ctgtgcgtga tattgccgct catctttccc ccttttgtga cgtcaagcgt
     3181 cgccgttctc agaaggtctg tgcattccac gacgggcgta tccagtgtca cgctgacgga
     3241 tgcctgcagg gtggctgttt tcatgccgct ggcgctcagt gcgcctgcgt ccgcgtcgta
     3301 gcggaacacc gcgccatccg gcgcgctgac cacgatttct ttcaggcttt tgccgggggc
     3361 cggaatggca tcactccaca ggctgccaat tatcatggcg gtttccgggt tgccgccaat
     3421 gcaggcaatt accacctgtt cgcctggtga tggcggcagc cacacattga aggctcccgc
     3481 gcgagaggtg ttccagcgca gccaacctgt ttccagttcg ccgctgcgaa cgcgcacgcg
     3541 ccaggacttc tcatcaactt cagagatgat cccggtgcgg atgatattgc tcagtagccg
     3601 catgagttct gcgctcaccg tacagcctcc gcaatccggc ccagcaccgt gttataaatc
     3661 aggcgctcat ctgcctggct gatacccagc agctcacgta ccgggtaatc ggtgaaaatg
     3721 cccggcgcaa cctgatcgcg ctcaccgaac tgatgaacgc gtgcaatacg tgcggccacg
     3781 ccgctgtaac ccaccgtcac accggaagca tctgcacggg ctttcaggta gcgggcggtg
     3841 cgcagtttta cgaacatggg gacgcgcttt gtgctgtcct ggttgatgcg ccgggtgcgt
     3901 atttccagaa agcggtcgat gtcatcccgg taaaacgtgc ggatgctgtt tttatcctca
     3961 tcccacccgg tgatggttcg cccgtatttc cccgtgtcgt gatgccagtt tttcagcgtg
     4021 cgtgcttcgt tattccagat aaagcgaatg cgctcctgta tccgggttac gtggcgtctg
     4081 cgtggtgtcc atgcggtccc gtccggcgct ttctgtggcc ggatacgtgc ctgctgggcg
     4141 cggcgtaaat cctgtgccag ctttctggcg atgttattga tggcctgctg attcaggctg
     4201 tcgcggatgg cctcaaaggt ttcatccacg cgagtgaatg ccttatccat cgctttcacc
     4261 ccacgtcaca tcctggaata catgcgacca gtcgccttcg gaagatggca ggcggggttt
     4321 tggctccagc aggtgttctg cctgcggtgt gccctgactg ctgcgcgtga tgcgaacgcg
     4381 ttcccgcagg gggagcgtaa acaggagatc ggcgctgtca tcgtcattga taacggcgga
     4441 aaatttgatg tcctgattac gctcagggtt gagcaacaac tgtggctgat tttcggataa
     4501 ccacgccagc agcggcagcg tgaggtcgtc cagctccccg gcgtaatcca tgacaaacat
     4561 caccatctga tagcggtaaa caaacgatgg ggtttctccg gtcgtttcaa tgttgccgct
     4621 ctccacgaaa atggtgaatt tttccgggtt agcctgacac catcggcatg aacgggtcat
     4681 ggcttcacgc agggaatcag ttttcagcat ggttgttatc ctcgttgttc agtcgttgca
     4741 gcctgcgctg ttccagtaat tcaatggccc gtttatccgc gttacaggtt tccagtgcat
     4801 ccagaaggcg gtcgccccat ataccgagat ttccccatgt gggagtgtca gggaaggggg
     4861 gaggcgttac cggtatggtc agcgtctgcg gtataagccg gactgacggc gctggcagtg
     4921 gcgcgttctg cgtgcctgcg cagcctgtca gtaaaacgag cgtcaggcaa agcgtgggcg
     4981 cattcatctt ttgcaatatc gttgcgtagc tgttcacgtc ttacctctcc gtcctgattg
     5041 cgttgctgat tttccacgcg gagttgcgcc agcacctgct gcatatcctg taccccggcg
     5101 ctgatgatat tcagggtgtc ggcggtactt ttcagggtgc tggcctgcgc ttcgtttctg
     5161 gcgttctccc ggcccagcga ccacgacaga cgcatggatg ttccccatcc ggcagtcaga
     5221 aggaaagcga cgccaagcgt gggccagagc ttcatgccgg ataggctccg tgtggtaact
     5281 gaaaatgcgg tccgtctttc agggtcttcc agtcgccgcc ccattccacc ggaatattca
     5341 gttcccggct ggcctgtctg aatgctgctg cgattttttc gtacagcggc cattcccatg
     5401 acatctggct gccgatataa gccacaacat ccacggcatg ccccgtaagg tggcggctgt
     5461 tcatggtctg gctcttaccc gtggccacca gttgcttctg gcggtaacgg ctgcgcaacc
     5521 cttcggtgat accaaaatcc acttccgaga tttccagtgc ccgtcgggtc actttcacca
     5581 gatcaggatt tacaccctgc aaattctttt cgctccggct gctgaattta aatgtgttgc
     5641 tcattcgtcc ttctccttca ccctgcgatt aaaggccgca ataaccttgt cgcgtgcttt
     5701 ctctgcaccc ataaaaccga ttgatgcgcc gataaacgtc acggcatctt caggaaaccc
     5761 gaagaagcgc aacgacccgg ccacggccat ggcaagaacg ccgcacgcca gcgatcccgt
     5821 tacggtctga accagtgttc gtccgtcata aaggctcatc agcgcggaaa tgctgaccgc
     5881 cgcgcctact gcatacaccg ttggcaggtg gtcaaagagc cacgcaataa cctgctctgt
     5941 gatccctgtt tgaatggtgc tcactgctac tccccccaca actgaatcat ttctcgtttc
     6001 ttcttctccg gctccggcat ctccacttcc tgcccggcgt ccagaaatac ctgctgacag
     6061 agtccggggt tggcatccag caccttttcg gtgacgccct gcgtcgtgcc gtagtaccgg
     6121 aaacagagcg aatccacggt gtcgccttcc agtgccttca ctttcatcag cacaactccg
     6181 caaagattcg cgggcggcac agaatgtcag agatggccca gctcacatca cgccacaaat
     6241 ccgatgtctg tatatccaga gcgtctgccc ggcggtcgcc cttgtccgta gtgtctgcat
     6301 cacgataacg ctccagaatc agggcgcgcg tggcggtata aacagcattg cgccagtgcc
     6361 agagattgac gctttctccg ttaattacgg gtgccggaac atcggccagc gtctgatggc
     6421 cagctgcctg ctgttcctgc tgccatgctt ccagctcgcg ggtaacgtgt gccacagccc
     6481 cggtggcagt atgcagcagg cgggaggtgg tcacgcgccc cggcagtcgt accgccagac
     6541 gcagctcgcg cagcacaata tccggccaga atgcacccgc tgaaatgcgg gtatcgccat
     6601 catcggtatc ggtgatgtcg tcctctgcgg gtccgggttc agttctggca actatagtca
     6661 tggggttcac tcctgaaaaa aaatcgggcg gtgggtgcgc ggtgtaaacg gtcacggagt
     6721 caaactggaa caccgcgcac gccgcccgct gacggggtca gtcgttaacc gcgcttcgcc
     6781 ttctgcgtcg cggtggtttt tcgtgttgca ggcttccgcg ttgtcttttt acttttgctg
     6841 ctttttgctg ctttcgtcct gcgcctgctg tgcgctggcg tcttctggtt cggctgcgga
     6901 atcggctttt ttcagggcgc gggaaagggt tgcaatctcg cgtttcacac ctgcgttcgg
     6961 gttcaggtgc attgcttcgc gcagcagctt cagtgacagg gccatgctgt ccgcatcact
     7021 caggccacgg cgggcaaagg cgcacgcttt gcataatttg gcgcgcactt cgtccggcat
     7081 gtcctggtcg gtgacaatct cccggagggt gtccagtggt tcgataaagg cggacaaatc
     7141 cgcgtcggca tccgtcccgg cctgcgtcag taccggatta cagatttctt cggtcagtac
     7201 cgtggcagca gtacggccaa agttatccgg catgatgagg ttgtgacgga ctacatacgc
     7261 gccgatacgc agcgcaagcg gaagatcgcc acagtcaatc gcccacacca tcagcgtggc
     7321 aatcacttca tcctgctgcc cgccgtcagc ctccagcgtt ccctcaatcc agccggaaaa
     7381 atccggcaac aactcttttt tgatggcggc tttcgcgctt ctggcctgta cgcccttaag
     7441 ccgggcctgt gccagacgca gacgatacag cacctcttca tgcgcggtac gcgcggcgtg
     7501 gtccacgcct tcattcgccc ggcctgcgcg ctgtgccatc acgttctgcc agtgttgttg
     7561 tgcaggagta atcatttttg ctctccgtta caggcgggca tgatgcccgc cgtgagttga
     7621 ttagctgtcg gcgaacttca ggccagtaac catcgcgcac ttgccatagt cttcaacgac
     7681 ataagcgtca ttgatggact ggtaggtggc gatgcggttg tattccggct cgtctttcat
     7741 caggcgacgc attgaacctt tctgccagta aatcgacagg ttgttgaacg aggtgatcag
     7801 catcgttgca tccgggaaga acggcgcaag gaacacgccc agcccgccaa tggtgcgcga
     7861 tgacaggatg agctgcccgg cgagtaattc cgcattggga ttctggccgc tgatgctgtt
     7921 cagcacgggc agacgcagcg agttaaacag gttgcgcccc ataatcacca cgaggtcgtc
     7981 agcttccttg tgccattcat ctagcaggga tgaacgcgcg tcctgtacca gtgcatcagc
     8041 gttcgcatac ttacccgcgt gcgccacggt gttgtccatg ttgcgggagg tcagcgtcac
     8101 gtcattcata acgcgttcgc tggcgtcggt tctgatgtgc tccagccagc ccacgttaac
     8161 gtcctgaagc agcttgttgg tgctgaagtt ggactcatcc gcgtgagacg tgccgttgaa
     8221 accgatcatg atgcggtcaa gcgccacctg tcgggcaatc tgtgcgctga tgcgggactg
     8281 aaaatcaggg tgtgccgacc aggcatcaag ctgcggatac gaaataaacg tgtcgtagtt
     8341 cacctgttca cactgatatt tgcggttttt cagatcaacc acgttattcg ggttacggcg
     8401 ttttgtgccg tcataactgg tattcgtgcg cgcaatcggt cctgtggtat ccaggaggat
     8461 tttttcgcct ttctggtcgg tcacgccgat cacgttattt ttttcgtaaa ttcggtactt
     8521 tcctttgagg cgttttcaaa acgctgctgc accgcgggtt ccacggtaaa tcgcgacacc
     8581 agtgcagata ccgggatatt attaagcgac acctgctgcg ccatatagca acccagcttg
     8641 ttgcgggtaa tatctgacat caccagattc ataaaaaatt tgctcctttg tctaatcaga
     8701 agtcggccag ctggtcggag gctgcgcccg ttgcggtgaa gcggttctgc ggatcgccgt
     8761 cctgcgtgcg cagtttttcc ttcagtgctg ccagctctgt ggtcagtgac gtaattttct
     8821 ggcggtcctg ctgatggcgg gtttccagca cattaaaacg gtcgataatg tcggcctgtg
     8881 acgttgcgac gccttccacc gcttcctgaa tacgggaaaa actggcgtca tccgctttgc
     8941 ggccacggcc aataatcccc attacgcggt taaaccactg ggtgccttct tcctggcgtt
     9001 gttctgccat ttcgatgatt tcagactcga tggcttcgga gataagcggc gcttcaccct
     9061 ggatactgtt aaacgtcatc accgcctaac gttgctgtgc cgtgaatttc aggcgctcag
     9121 tgcccaggct tgccggggtg tcggtcatcg ccagcccgac cagataggcg cgcccgttaa
     9181 cggagaactg cgggtgcagt tcgatactgg aatagatttt cttgccgtcc gcaacaagct
     9241 gcttcatgcg ctcggtcggt tcgatttctg catacagcgc agtacgtccg gccagcggac
     9301 cttccgtaat gtcttccgta ctcagtgcgg tgacatcgcc cattgcggaa aattcgcttg
     9361 acgggcatgg cgagagatag tgctcaacgt tcacgcgggc agcgtaaaca tccgggttga
     9421 agttctcggc ggcttcacgc agatgcaccg gactgatttc acggccatca acagttgatc
     9481 cggagacagc cacgcgaaac tttttgcggg atgtcttttt ttcattagcc atagtttttg
     9541 cccctctgac tggttcttca gtcatgatgg caaagcgtaa caggctgata caaagggctt
     9601 ttgttgtaag aaaacggcca gaacagaggg ttaaggagaa cagtttcgcg cgcgggtaat
     9661 cttcctgtaa ttactcaggg ggagcaatga ttcaggacgc ttttgtgcgc cagcgtgcgc
     9721 ggcaacttta ctggcagggt tatccgcccg cagaaatatc acgtctgatg ggaataaacc
     9781 cgaacacgat ttatgcgtgg aaaaaacgtg accagtggga tgaaacgcca cccgggcagc
     9841 gtgtcacgca gtccatcgat gcgcgcctca tccagcttac tgaaaaacag aataaaacag
     9901 gcggtgactt taaggaaata gacctgctga cccggcagct taaaaagctg catgatggcc
     9961 agccggatgt gatggccgca ggaaagaaag gccgggcgaa aaaactcaaa aatcatttca
    10021 cgccggaaca gattgccgca ctgcgggaaa aaatcatcag caggctggag tggcatcagc
    10081 ggggctggtt tgactccctg accctttgca gggaagccgg gatacgtaac aggatgatcc
    10141 tgaaatcccg acagattggg gcgacctggt attttgcaca ggaagcactg ctgatggcgc
    10201 tgcgtgacga tgtggcgcaa ccttaccagc gtaaccagat ttttttgtct gcgtcgcgtc
    10261 gtcaggcgtt ccagtttaaa agcattattc agaaggccgc ggctgaagtt gatgtggagc
    10321 tgaaaggggg cgataaaatc atcctctcca acggcgcaga gctgcatttt ctcggcactt
    10381 ctgctgcgtc ggcacagtcc tatacgggca atttttattt tgatgaattt ttctgggtca
    10441 gtcgctttgc tgaactgcgc aaggtggctg gcgctatggc aaccctcagc ggactgcggc
    10501 gcacctactt ctccacgcca tccaccgaaa cgcacgaggc atacgcctac tggaacggcg
    10561 accgctggaa cgagaaaaag gcctcgcata aacgccagcg tttttctgtg gactggaaaa
    10621 cgctgcataa cgggcttatc tgccctgacc ggacgtggcg gcaaattgtc acgctggaag
    10681 atgtggttaa tcacggctgg aaacacaccg atatcgacga aattcgtgat gaaaacaccg
    10741 aagacgagtt cctcaatctc tatatgtgtg agtttgtccg cgaaggggaa tcggcattta
    10801 acctgaatat cctgattggc tgcggcgttg acggatacga cgactggaaa gactggaaac
    10861 cttttgctcc ccgcccgatg gggaatcgtc cggtatggat tgggtatgac gcaaacggca
    10921 gcagtggcaa cggcgacagc ggcgctgtgt ccgtggtggt tcctccgtct gttcctggtg
    10981 gccgttttcg aacggtggag acgcgacgcg ttcaggggct ggagtttgaa gaacaggcca
    11041 gagtcattga agagttcacg tgtcgctaca acgtggaaca catcggcatt gatgtgacgg
    11101 gcgggaacgg ggaggctgtt tatcagatag tgaaacggtt tttccctgcc gctattccgt
    11161 acaccttcac gctgtcatca aaacggtcgc tggtactgaa aatgctgcaa ataatgcgtg
    11221 ccgggcggtg ggaatacgat cgcgccgaac gcgagctggt cgcggccttt aacgccgtgc
    11281 gtaaggtgaa aacaccgggc ggctttatca cttacgaaac ggaccgagcg agggggatca
    11341 gccacggcga ccttgcgtgg gcaaccatgc ttgctgtcat taacgaaccg attggcggcg
    11401 aaggagaaaa cgagcgtttc acggttatgg agttctgatg agcagaaaaa ataaaaaagt
    11461 gcgcatgagt tcacgcattg atctcgctga tgcgctcagg aaagaatcat cgctcagtgc
    11521 attcacattt gatggtcctt atcgcctgac ctgctggaca atatgtactg tgctgataac
    11581 gggcggtggt atgaaacccc ggtggactgg tacggtctgg caagagctgc ccggcaaacg
    11641 tcctggcatc agtctgcgct ttattttaag cgcaatgtat tgctcggttg ctacatcccg
    11701 cacccgctgc tttcccggca ggatttctcg gcgctggcgc tggactggtt tgtgttcggt
    11761 aacgcattcc ttgagcttcg aagcaatatg ctcggcgaac cgcttaaatt acggcacgcc
    11821 ctggcgaaat acatgcgacg cggaagcgat cttgaatcat ggaggtatgt gcaggatggc
    11881 aaggatgcgt ttcagtttcg cccaggcaaa gtgtgtcacc tgatgaatcc tgacattaac
    11941 caggaaatct acggcatgcc ggaatatctc ggcgcattac tctcggccag cctgtctcat
    12001 tcggcggaca tgttcagaaa actgtattac gacaacggat cccacgccgg gtgcatcatc
    12061 tacatcggtg ccgcgcaggt aaaccgcgaa agcatggact ccctgaaaga aacgctacag
    12121 ggtgcgcgtg gtggtggtgc gtttaaaaac gtgctcattc atgcgcccaa cgggggcaaa
    12181 gagggggtgc aaattttgcc gttccagcag atcaccgcaa aggatgagtt catgaatgtt
    12241 aaggcggcat cccgtgatga tgtgctggct gcgcaccgcg ttccgccgca actgatgggg
    12301 gcgatgccgg gtgaaaaaag tgcgtttggt gatgtggaga aggccgcgcg ggtttacgca
    12361 attaacgagc tgatgcccgt catggaggcc atgaagcaca tcaatgactg gcttggcgaa
    12421 gaggtgatcc gctttaaccc ttacgcactg ttagacatcc agcccacatc ctgacgcgct
    12481 tcgcttgtct gctgcttcgc cggggcataa aaaatttatg ccccgactct ccagctcctg
    12541 tatcagtcag ataatttcac gacgccttcc agtttatcgc caccatcgac ggtcagactc
    12601 ttacgcaatc ccaccgcgtt gactgcatgt tctcgccgcc tcagtgcgat tttgacggcc
    12661 ttacctttca ccccatcaaa tcagaatccc tcacgtattt ttcacgctca gcgtgagaaa
    12721 tacggccatt ctgtcgtgtc gctgcgacat cgttaaggga acgctattta ccccctgaaa
    12781 cgcgggctgt tcccccgtca cctgcgcgca gaaaaagcgc gtttttttgt gcacgcacgg
    12841 atccttgacg gatccagccg ccacgcgggc tggaagggca aaaattcgtt caaaaaaatt
    12901 gtgcaaatgt gcagcagggc gatgtgcgat tatcgccctg gtttgagggg gatcaggtgt
    12961 tatttttatc tgtcgtcagt gggctaaacc atccacaatt tacatcgcat gactgatgcg
    13021 ttctgtcctc gtgtttctcc tgccacaatg cttttccgcc agcctttatg atggctcttt
    13081 caacatcccg ctcgtatcgc aagggctgaa atacgtcatt aatgaaatat tcgcttatgt
    13141 ccggaagcga tactgcaaaa ttatttgttt gttgcgccgt cctgctatgc agcaaagcgg
    13201 catgctttaa tgcgtcctgt gctttctgga atttaagtgc atagtcagtg gcgatttttt
    13261 ccagttcagc gattcggttg tctttggttt ccagccaatc aagtagcgcc aatacttcag
    13321 gatccccgac atccaacact gttacgcgtg atttttcata atgtttgtca gcaagagttc
    13381 ggccaatttt gaaatctcca tcatcaccat aaccggagca ggcataaaca acctgtgctc
    13441 cagatattcg ctgaattgac atttcctcgc cgcaaatagg gcatttcggt actggcacag
    13501 gtgaataacg ttcacgtaat gcctgatagt tgatttcgct cattaagtcg ttctccttgt
    13561 ttatgttctg aggtggagag cagggcgaac tcgccctgat gttgtgttat tcaggaaata
    13621 acgcccggat atttccggcc atctgactgg ttatctgtgc ggttgatact ggctgtgatg
    13681 cggggcgttc tgtcctggtt tgtgtcactg ataacgcttc atcaccagcc catgcagcca
    13741 gtcgataagc ctctgccgga ttcattttca gaagtgccag cccggccaga aaagccacgc
    13801 gttggccgct tttgcgggct tctggtgtaa ggctgtccag ccaggcgcat gcttctcctt
    13861 cgttcttgac ggcggtgggc ttcagataga aacttatccg tctggttgga gtcgtcattg
    13921 gtttactcct tgtccattgc gtacagccca ttaaccagag caaactgtgg caccccgtcc
    13981 gcgatgaaag tcgcattaac tccgcaggct tcgcggatag cgggtgccac aatctccgcc
    14041 cctccaccga caaccatcac ccgcccgtaa cccgaaaaaa ccgccagcgc gcggatcacg
    14101 cgttgtttca gtgtttcttc cttttcacga attaccgcca tcaggctggc gtaatgcgcg
    14161 tcattgtgga tgtgctggcg cagccaggct tcatcatggc gatgttcgat aatggtattg
    14221 gcgatgtggt gactggtgcg cataccgtta gtggccatca ccgacagtac ggcatcggcc
    14281 atcagagaaa cgcccacgtg tggatcgcaa aacacctggc tgatacctgc cagttgcccc
    14341 tgaacctttg ccacatccag cgtggttccg cccaaatcca caatcagcag ggattcaaac
    14401 ggactcatgt cagccagtgc cttaaagcca gccggaatgg attcaggcat aacctgtacg
    14461 ttacggatag tgaatgcttc gccgttctgg tactccaccg ggcgcatgac gttcgctttt
    14521 ttgcgg
//
LOCUS       DADMIB010000104        14510 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.104, whole genome shotgun sequence.
ACCESSION   DADMIB010000104 DADMIB010000000
VERSION     DADMIB010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14510
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.104"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..791)
                     /gene="fimH"
                     /locus_tag="JNZ89_002893"
     CDS             complement(<1..791)
                     /gene="fimH"
                     /locus_tag="JNZ89_002893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria D-mannose specific adhesin FimH"
                     /protein_id="HAY8936702.1"
                     /translation="MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVN
                     LAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSS
                     YPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNS
                     DDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYL
                     SGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAV"
     gene            complement(811..1314)
                     /gene="fimG"
                     /locus_tag="JNZ89_002894"
     CDS             complement(811..1314)
                     /gene="fimG"
                     /locus_tag="JNZ89_002894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimG"
                     /protein_id="HAY8936703.1"
                     /translation="MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTT
                     NATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQG
                     TAQNIQLELQDDSGNTLNTGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI
                     SITYTYS"
     gene            complement(1327..1857)
                     /gene="fimF"
                     /locus_tag="JNZ89_002895"
     CDS             complement(1327..1857)
                     /gene="fimF"
                     /locus_tag="JNZ89_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709916.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimF"
                     /protein_id="HAY8936704.1"
                     /translation="MRNKPFYLLCAFLWLAVSRVLAADSTITIRGYVRDNGCSVAAES
                     TNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLA
                     LENTVSAASGLGIQLLNEQQNQIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPV
                     TAGHINATATFTLEYQ"
     gene            complement(1867..4503)
                     /gene="fimD"
                     /locus_tag="JNZ89_002896"
                     /pseudo
     CDS             complement(1867..4503)
                     /gene="fimD"
                     /locus_tag="JNZ89_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418737.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein FimD"
     gene            complement(4570..5295)
                     /gene="fimC"
                     /locus_tag="JNZ89_002897"
     CDS             complement(4570..5295)
                     /gene="fimC"
                     /locus_tag="JNZ89_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HAY8936705.1"
                     /translation="MSNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATR
                     VIYPAGQKQVQLAVTNNDENSTYLIQSWMENADGVKDGRFIVTPPLFAMKGKKENTLR
                     ILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQFAIISRIKLYYRPAKLALPP
                     DQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAG
                     SNITYRTINDYGALTPKMTGVME"
     gene            complement(5332..5871)
                     /locus_tag="JNZ89_002898"
     CDS             complement(5332..5871)
                     /locus_tag="JNZ89_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY8936706.1"
                     /translation="MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCR
                     IEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGK
                     NPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPVNWKRLYSGSTSLHFIAKYRATG
                     RWVTGGIANAQAWFSLTYQ"
     gene            complement(5936..6484)
                     /gene="fimA"
                     /locus_tag="JNZ89_002899"
     CDS             complement(5936..6484)
                     /gene="fimA"
                     /locus_tag="JNZ89_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding
                     lipoprotein/fibrin-binding adhesin FimA"
                     /protein_id="HAY8936707.1"
                     /translation="MKIKTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAAC
                     AVDAGSVDQIVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAID
                     AGHTNVLALQSSAAGSATNVGVQILDRTGAALTLDGATFSEQTTLNNGTNTIPFQARY
                     YATGVATPGAANADATFKVQYQ"
     gene            complement(6965..7561)
                     /gene="fimE"
                     /locus_tag="JNZ89_002900"
     CDS             complement(6965..7561)
                     /gene="fimE"
                     /locus_tag="JNZ89_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria regulatory protein FimE"
                     /protein_id="HAY8936708.1"
                     /translation="MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISE
                     LLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTLERANWKGADRTDAI
                     FISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYL
                     GHRNIRHTVRYTASNAARFAGLWERNNLINEKLKREEV"
     gene            complement(8039..8641)
                     /gene="fimB"
                     /locus_tag="JNZ89_002901"
     CDS             complement(8039..8641)
                     /gene="fimB"
                     /locus_tag="JNZ89_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria regulatory protein FimB"
                     /protein_id="HAY8936709.1"
                     /translation="MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIH
                     GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTPPLLNKEVQALKNWLSIRTSYPHA
                     ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL
                     IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL"
     gene            10097..10813
                     /gene="nanC"
                     /locus_tag="JNZ89_002902"
     CDS             10097..10813
                     /gene="nanC"
                     /locus_tag="JNZ89_002902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313297.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminic acid outer membrane channel
                     NanC"
                     /protein_id="HAY8936710.1"
                     /translation="MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLK
                     VSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHF
                     SSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSSDMSRDNVHRWDGYVTYH
                     INSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGV
                     YNGRDNLSENSYRIGVSFKL"
     gene            10833..11939
                     /locus_tag="JNZ89_002903"
     CDS             10833..11939
                     /locus_tag="JNZ89_002903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate epimerase"
                     /protein_id="HAY8936711.1"
                     /translation="MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIG
                     LGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNREGLTQ
                     VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNE
                     AGKDSTAVDKINAYYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK
                     GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIF
                     AGGAGFKGSRENYQHGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW
                     NNSLLIIGGETAGGKAVTDSVLISVKDNKVTVQN"
     gene            12004..12984
                     /locus_tag="JNZ89_002904"
     CDS             12004..12984
                     /locus_tag="JNZ89_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709926.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HAY8936712.1"
                     /translation="MDAIISPDYYYVLTIAGQSNAMAYGEGLPLPAREDAPHPRIKQL
                     ARFAHTHPGGPSCHFNDIIPLTHCPHDVQDMQGYHHPLATNHQTQYGTVGQALHIARK
                     LLSFIPDNAGVLIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRT
                     RAALAKNPQNKFLGVCWMQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNIT
                     DAPWFCGDTTWYWKENFPHAYEAIYGNYQNNVLANIIFVDFQQQGERGLTNAPDEDPD
                     DLIMGYYGSAYRSPENWTTALRSSHFSAAARRGIISDRFVEAILQFWREK"
     gene            complement(12992..13114)
                     /locus_tag="JNZ89_002905"
     CDS             complement(12992..13114)
                     /locus_tag="JNZ89_002905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012139841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY8936713.1"
                     /translation="MISFVFLLLVCPNCHAMLHRRKPPFTPEELKALMDANKSN"
     gene            13196..14068
                     /locus_tag="JNZ89_002906"
     CDS             13196..14068
                     /locus_tag="JNZ89_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004186812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY8936714.1"
                     /translation="MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPR
                     LFDYGSEIYEPLHSLLERFGPQRSQYRPDMPFWRLQGDGFWQLHNAELCSTAGSSRQP
                     PVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQ
                     QIRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALEAAHIKWKQHGGPCEIPNGL
                     ALCAIHHKAFDKGSIGLDENMRVLVSDAVNGGGSVERLFWDFDGKIIALPQVRKNYPY
                     EGFVEWHRNEVFRG"
     gene            14113..14292
                     /locus_tag="JNZ89_002907"
     CDS             14113..14292
                     /locus_tag="JNZ89_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001153035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936715.1"
                     /translation="MQDLAASLQLAFDSGAKRVLLPISWAMDIPTVPAELFTKFQVSF
                     YSEPVDAVYKALDVN"
BASE COUNT         4064 a         3347 c         3166 g         3933 t
ORIGIN      
        1 actgctccta acgataccgt gttattcgct ggaataatcg taccgttgcg cgtcaactgt
       61 acgccgacgc cctgcgctgg tgaaaacgac gcggtattgg tgaaaatcga gttgcccgca
      121 tctgcggttg tgccggagag gtaatacccc aggttttggc ttttcgcaca ataaacggta
      181 agaggaattg gcactgaacc agggtagtcc ggcagagtaa cggtgacatc acgagcagaa
      241 acatcgcagc cgccagtagg caccaccaca tcattattgg cgtaaatatt ccacacaaac
      301 tggaaatcat cgctgttata gttgttggtc tgtcgcaaaa taagcacggc aattaatgag
      361 ccagctttaa tcgccacccc gcccgcactg ctcacaggcg tcaaataaag cgccaccggc
      421 cacggcttat ccgttctcga attataaaca acccgcggcg tttcgctggt ggtcggaaat
      481 ggatagctac tgccactata ttttacggtc ccggaaaaat tagataacac gccgccataa
      541 gccgagcctc gttgcagtgt gacatagtct gtaatggttt ccggataatc gttatggcaa
      601 aagatttgcg tcgaaagatc tacgaccagg ttttgcccca cattcacgac aggcgcaagg
      661 tttacataaa cattagcgct gccaccgcca atagggatag cagtaccatt ggcggtttta
      721 caggcgaatg accaggcatt taccgaccag cccatcagca gtacagcaaa cagggtaata
      781 actcgtttca ttacaattat ctcttcgggt tcagctgtag gtataggtga tgctaatcac
      841 tgcctgaatg gttccctgag tggctccgcc atttaccgtc aatgctctga cctgtaacgg
      901 gaagtgcgct gattgtgagg aatcatccac ctgaactgtt ttggtttcgc cagtattcaa
      961 tgtgttgcca ctgtcatcct gtagctctaa ctggatgttt tgcgcggtcc cctggttttt
     1021 ataatatccg gtactgtcgg ctgccccgct gaagctggca gtgaccctcg acgttcccac
     1081 cggacaatta gtcaactcaa gcgcaacatc atgccaggcc gatgccgccc cggcagacat
     1141 cagactgaaa gaataaagat cgccgagatc aaccgtggca ttggtggtgg aaactgtgca
     1201 cggtttggcg acgaccttac cgttcaccgt gatggtgaca tcggctgcct gtattgtcgc
     1261 acttgcgagc gccaatattg ccgccaataa atacccacgt ttgcgccatt tcatgagcat
     1321 ctccagttac tgatattcaa gagtgaaggt agccgtggca ttgatatgcc ccgcagtgac
     1381 aggcacctgt gtcgccatta gccgggcgta aaaattcaac gtatttggtt tacccggcgt
     1441 cagggtcgtc cacgaaatcg cggacgatgg agcattaagg ggtatctgat tttgctgctc
     1501 attcagaagc tgtattccca gtcccgaagc cgctgacacc gtattttcaa gtgcaagcag
     1561 gttggcattg tggctatctg caacgccggt aaacccaacc tttacggcag aaacggcgtt
     1621 accacagggt gacagcaaaa tacgaaatgg aacgacagga gtcgttgcgc caatgttgtt
     1681 aaattgcttc gccgcgtttt ccatcagatc aacagtaaaa ttggttgatt cagcggccac
     1741 actacagccg ttatctctga catagccgcg gatagtaatc gtgctatccg cagccaaaac
     1801 gcgacttacc gccagccaca aaaaagcgca cagaagataa aaaggtttgt ttctcatcac
     1861 gcccccttaa cgacattcag ctgatagctg ggttaataac tgctgctgac tctctggtgg
     1921 cagttgataa ttggcgatac agtgagcatt ttcctcttct ccccatttca cctgaacttt
     1981 tcccgctaaa ggcattccgc tgaggtaaac ctgaccatta tccgcaacaa tgccgctact
     2041 ctggctactc tctgatgtca ccatcgcccc aaacggcagc ggcttattat tgtgggttag
     2101 cgtcatgagc agttttatcc caacgcgcgc tttaaactct gctcgcacga tcgccccacg
     2161 agtgggaaca acgttagcga ccgcgttatc taaatcgacg ttatcagcca gggtattggt
     2221 atccagcgcc actctgtttt cccgatattc ggtggcataa ggcagcacgg cataaccgcg
     2281 ccagtcggta cgcacccccg tctggttttc gacttttgca tcttttgcgc caggcgcttt
     2341 aacaagtacc accgtatcgt ttaacggctg ccccagcgtt acgccattgg catgagccag
     2401 taccccaccg ctgactccgt aatagagctg cttaatatca tcgctatggc tgtaaccgat
     2461 attggcattg ccgtaaccac cgcgataatt cagcgtggcg tagcctgtac ttccgctatt
     2521 accatcgcct cccccggcat agccggtttg cacgctatag ctgaggttgt tgtcttccag
     2581 caacgtaccg tatacaccag ccagattggt catccgaccg ttgagatcgt gtgacacgct
     2641 gtagctggca ctggcatgtc gccactgaga tttactgtca gaacgcagcc agtggctgaa
     2701 aggaatattg acgttaagcg ctaacatctg atcccgccct ttttgccagg cgtttttcgt
     2761 caggctatag ctgagcgtcc agttgatatc ttcgaacgca gtatttaatc cagcctagaa
     2821 ttgctcatcg acattactcg ttccccaata agtttgatgg ctaccactca aatacagtgt
     2881 tgatgtgcgc ccgagttgct gagtaacggt gagctgtaat ttcccgcgtt tgttataagc
     2941 gaggttgtaa tagtcggtga atttcggctt aacctgaata actccatcct gtgtttcgat
     3001 gttgtagcca ttcattcgac tgtatgttgt atcagcgaaa ttaaaatatc cgctggtcga
     3061 ataacggtaa cccactaact gaatattcgt gcctgactca ttgagcgatt tgttatagag
     3121 aaaacgcacc gattgtccgt catgctgact gtcatcggga agtgtggaat tagcctgcgt
     3181 catatccaca gacagagcgc ccagtgcccc catgtttttc ccgataccga aattaaaagc
     3241 acgataacga tccgccagtt gcgttccacc atatattgtc cagccagccg gaaggccgtg
     3301 gagtaatgta ctttggaaaa agcggggttt ttcctgctgc gtatttccac tacggtattc
     3361 tcctgccgta atggaataac gagtatgccc ttcacgttgc aaaagcggga ctgacgaata
     3421 gggtacggta aaaatctgcg tgctgccgtc agcctctttg atcgttacct gcaagtcacc
     3481 actattacct gcggcataga tatcgttgat ggtaaaaggc cccggtggca ccgtactatt
     3541 ataaatgtca tacccatttt gtttaatagt gacctgtgca gtaccacgag caataccgtg
     3601 gatcaccggg gcaaatcctc tttggctatc gggtaacata ttgtcatctg aggccaattg
     3661 tgcgccgcga aagttaatac catcgaaaat atcgccctgg gtataaccat cacccagcgt
     3721 cagccgggaa cgtaacggta ttatgtctcg ctcaagccag gtattgatat gctgccattt
     3781 atttttgcta cctgatgatc tgtcgctact gttataactc cagctggtat tgtcgcgtaa
     3841 acaccacgca ccaatattta acccactctg taggtttaaa tatgcataat ggctgttacc
     3901 cccaatctga ttctgtacac tatttccgct gaaattataa ttgagcaatc cggcattaat
     3961 accgggatcc cataactcag gaggaatata accacgcgcg cgattactca taaatgcctg
     4021 agggatcgtc aggttcagtc gctgctgacc aacatccaga tgcgcagtag cgtcatggat
     4081 cattgaggtt aatggcacgc aggcatcatc tgccagcaga ttcataccgg agacagaagc
     4141 cgcattcagc cccatactgg caagttgcgc gcgtgtcagg cagggaacaa tcccttgttc
     4201 actgtcgccc gtattaaatg tgacatcacg cgttgccata taaccattat tcaaatagat
     4261 atcgacgcga tacgtccctg gcggtaattc ttgcccattt tcaaaacgcg ataaatcggc
     4321 cacagcctgg ggatcatccg ctaaaaagcg cggattaaaa tagagttcgg cagatgacaa
     4381 aggtgcctgt gcggcaaaag cacaggcgac aacgagccgg acaaaaaaac cagccaaacg
     4441 atgcttacga atatgcaagc attgtgtgtt tcgctggtaa agtcttaaat tcagatatga
     4501 cattattcct ccggtttaaa attacccggc agtcaattct ttttattcag gcgagaaatt
     4561 ccccctgcgt tattccatta cgcccgtcat tttgggggta agtgcgccat aatcatttat
     4621 tgttcggtaa gtaatattgc ttcctgcatc agaaggcaat ttaaccgtgc tttcgcccat
     4681 tggaggcacc aatgcatttt caagaacccg ggttccggca ttcaactctg ttaccgtcag
     4741 ataatagggt gtcgggttaa tcagcgtcag agaattcgcg ctacgacgaa atcttaattt
     4801 ttctgcggcc tgatcgggtg gcaacgctaa tttagccggg cgatagtaca gtttaatgcg
     4861 gctgataatt gcgaactgta gcgtattctc agtcaatttt gatttatcca ttgacggaat
     4921 cgctttaaca ttcatccaga ataaactttc ccggtcctgt ggcaattggt tatttgttgc
     4981 atcaagaata cgcaaggtat tctctttttt tcccttcatc gcaaacagag gaggcgtcac
     5041 gataaaacga ccatccttta caccatcggc attttccatc catgattgaa ttaaataggt
     5101 actattttca tcattatttg tcacggcaag ttgcacttgt ttttgccctg ccggataaat
     5161 tacgcgagtc gcacctaagg ccactcccgc ttcagcgcgt ccggcaacca tcattgccat
     5221 gaacatcagg atacctgcca gcaagcagaa tgttatttcc tgcgatttcc ttacattggc
     5281 gtttttatta ctcactgtcc tgttcctgtt atcacattat ctgctgaaca attactgata
     5341 ggttaaagag aaccaggcct gggcattggc gatgccgcca gtaacccaac gcccggtagc
     5401 acgatatttg gcgatgaaat gtagcgaagt agagcctgag taaagccgtt tccagtttac
     5461 tggaggacga ttaatcggta cgaggtttcc ttcatcatca aacaacgcta cgccaatatt
     5521 ggtggctatc cctggcccct ctcccacgga aagcacatcc ggatttttac catccgcgac
     5581 accgtgaaac gccacaccca cacgttcact caccaccgtg ctacattccc gtaaatgaat
     5641 aacaaaaggc accggtgcgc tatcttcccc taccgcatga aaccggttac tgctgatttg
     5701 ccccatattg accgtcattt gtttatcacc ggcttcaatc cggcaagttt ccgcaataat
     5761 gacgccctga aattgcatat ttccgccggg cagcgtagta ttccatttat ttccggccag
     5821 agcaaacatt ggcagcaacg acgctaatag aaataatctc ttccttttca tcgttatttt
     5881 tatcgcacaa gggtgggcat ccctgcccgt aatgacgtcc ctgaacctgg gtaggttatt
     5941 gatactgaac cttgaaggtc gcatccgcat tagctgcgcc aggggttgcg acaccggttg
     6001 cataataacg cgcctggaac ggaatggtgt tagtaccgtt attcagggtt gtttgctcac
     6061 tgaatgtcgc accatccagc gtcagcgcag cacccgttct gtccaggatc tgtacaccaa
     6121 cgtttgttgc gctacccgca gctgaactct gcagagccag aacgttggta tgacccgcat
     6181 caatcgccgt acctaaaaag gcaactgcgg ctttagatgc aacattggta tcgcaatcat
     6241 tcagctgaat gttaaaaccg acagcagaac tggttgctcc ttcctgtgcc agcgatgcgg
     6301 tacgaacctg tcctaactga acgatttgat caacagagcc tgcatcaact gcgcaagcgg
     6361 cgttaacaac ttccccttta aagtgaacgg tcccaccatt aaccgtcgtg gcagcggcca
     6421 gagccgctgt agaactgagg gacagagccg acagaacaac gattgccaga gttttaattt
     6481 tcatgctgct ttcctttaaa aaaactattt ctaaatcgac atgggcagtc gttctgtaca
     6541 ctttgttttg tcaacgagtt tgactgccaa cactgcacag ttttccccca aaagatgaaa
     6601 catttggggc cattttgact catagaggaa agcatcgcgc acaaactttt tcagtttatt
     6661 tgttggctta atattctatt gttatcttta tttatagatt tttatattgc atgaggtggt
     6721 ttttggagag aagaatgagg aagatgcgtc gagccacaga aacgttagct ttacatatag
     6781 cggaggtgat gtgaaattaa tttacaagag aaataattta catatcaaac agttagatga
     6841 tttttgtcgt tttttaaaat ttttatgctt gagaaaaaat acgtaactta tttatgatat
     6901 ggacaatttg gccccaattg tcttgtattt atttattttt taactttatt atcaataagt
     6961 taattcaaac ctcttctctt tttaattttt cgtttatgag attatttctt tcccataatc
     7021 cggcaaaacg agcagcatta ctggcggtat aacgtacagt atggcgaata tttcgatgcc
     7081 cgagataatc ctgaattaaa cgagtatctg caccacgctc cgccagttca taaccgcaag
     7141 catgccttaa catatgagga tgagtctgcg ttacggttcc agcttcaata ccggcatcac
     7201 gaataatgcg ataggcctgc tggcgagaaa gccgactccc gcggcgagaa ataaatatgg
     7261 cgtcggtccg gtcagcgcct ttccagttag cacgttccag ggtccagcgt tccacagctt
     7321 cacgctcatc aaaacgtaac gggtgaacgg tagaaaatcc gttcttcagt cggcgaatat
     7381 ttattcgacc ttcattaagg tcaagatcct gataatgcag atcaagcagt tcactaatac
     7441 gcatcccatg ccgatatgcc aacagaataa gacaataatc tctggctccc gttgccccgt
     7501 aacaaaccgc ctgcatcatg gcctgaactt ctttaccggt aagataacga cgtttactca
     7561 caatagtagt actcctaact gagatatatt tgaatgaata cctataggaa acctcaatcg
     7621 gtcaaaatta gcccaataga taaaaagata accacacacg aagtgatgtg gctatcagtc
     7681 aattacatta aatatcatac aaaaataaaa tatcactgat gtgacaacat ctattttcat
     7741 tgatttgatt caatataaca atagattgta gtagattagc ttccagttgc ttaaaaaata
     7801 aagaaaaaag tgcgaaaaca ggagaattta agtgatgtgt aaatttatga atgattttgt
     7861 ttatttattt tgaagaacat aaaccattgt attttgtatg gatatggtta acttaatgct
     7921 tattatgata attaagaatt atacttacaa taacatcaat taataaatgg ttaatcattt
     7981 ttgatatatc gtaagaataa tgtagttttt aacaccatcc ctggtatctc aactatctct
     8041 ataaaacagc gtgacgctgt cgtcctctgg ctctatccca gatgccgtaa aaacgccctg
     8101 cattgctggc ggtataccag acagtatgac gaatattgcg atgcccaaga taatcctgga
     8161 taagtcgcgt atctattccc atattcgcca aagcaaaacc acacgaatgg cgtaacatgt
     8221 gcggatgaat ctccagtgac aacccggcat taccaccgga agtcgagata atatggtaaa
     8281 actgttgccg agaaagcgga ttccccttac gcgataaaaa tacccactcg ctctcagcat
     8341 gcgggtacga agtacggata ctcaaccagt tttttaaagc ctgaacttct ttattcaata
     8401 gcgggggcgt tgttgaaaag ccttttttta atcgatggat atatatacac tttgccttaa
     8461 gatcaatatc cgaaatcctc aatcgacaaa tttcactcgc ccggaaacca tgaataaaac
     8521 aaagcaaagt cagacaataa ttacgtgctg catgaggccc ggtatttgct gctttaagga
     8581 gtgattcgat ttcactatgg gtcaggaagt tccttttttt gttatcagcc ttattcttca
     8641 tcgtttttcc cttataatta cagacgcgca ctagctgtgc tgggttagca ataatccaac
     8701 atttttatcc tgattatgtt tataaaagcg aacgtttgct taataactaa cgtaagtgga
     8761 ccagttcttc tgagtgaact taaatggggt agcaacagtt aattataata acgttgccat
     8821 acaaacgcta tgctcttgca tgctatgtac ctttatatat ttatcaatcg gatacgaatc
     8881 taataatacc cctcatcatt aatgcaacta atcttatcta tatatcatgt gatatgttct
     8941 gtaacaagta aaatcagcat aaaaaattca gcaaaattta atattcgttc aactagccgt
     9001 ctcacatatg acattattag tcaactccat ttgccacaaa atggctattt catggaacgc
     9061 agtaatttct tagtggctat tatcatgcta attcttaggt ccctagcgat tattcctggc
     9121 tgattcgtca gcttacgcca tgagattgtt acattccttt ttatcctgga gatatggggg
     9181 aacgcaggag atgatttttt catctacatt cgttggtaaa tatagctttg gtcactacga
     9241 cttaaacctt cctcaatcac agccattcgc cgggcgatac ggcaaacaaa ctaagtgaaa
     9301 catcatcctg aaaacaccaa catcaacaag cctctccaga tcgacttcag aagtgaccag
     9361 ttacaagcca caaaccagga aacatatttc atgatgagaa ttatgctcag cctgatggcg
     9421 ggtaaacact gattttcacc aagctcactg agttagcttg caaagcttcc cttgtttaga
     9481 ctccaaataa attatttata aaacaaacat ttaaacaaag atctttagtt tttgaagacc
     9541 accgcaagtg ttcgtctggc ttcacatggc atcttcctct tagaaaaaga tcgacatatt
     9601 ttgtgacacg aattgcaaat ctggttttgt tgtatggatt gcgtgatttt tgatctggta
     9661 taacaggtat aaaggtgcac caagatagtc aatgagacag ggcatctcgc aatctatggc
     9721 aaacatcact tcagttcttt ctcatcgggt gatgaaaacg cacttcagtc tgaaaggaat
     9781 atgaaaatga gatcaacaga cactctattt tatgactctg ggtaaaatgg attgagtaag
     9841 tgatatagct tacgaaaatt caaatcaatt aaacatcaga agagatttta tactcaggta
     9901 tttaatctgg atctctgttt atttaaataa tgtgaaaaga gatttttcac aggagacctt
     9961 atacaaaaaa atataaaata cagctaccgg ttgccaaaga cactataagc ctggcaaaaa
    10021 atattacaca acataaatgc taattgttta tgcgggcttt gtattgcttt ctgtatccta
    10081 caaatgagtg aaatttatga aaaaggctaa aatactttct ggcgtattat tactgtgctt
    10141 ttcgtcccca ttaatttctc aggctgcgac actggacgta cgtggtggat atcgtagtgg
    10201 aagccacgcc tatgagactc gactcaaagt cagtgaggga tggcaaaatg gatggtgggc
    10261 aagcatggaa agtaatacct ggaataccat tcatgataat aaaaaggaaa atgccgcact
    10321 caatgatgtt caggttgaag ttaattacgc gattaaactt gatgatcaat ggacggtgcg
    10381 cccgggaatg ttaacgcatt ttagcagcaa cggcacacgc tacggaccct acgtaaaact
    10441 gtcctgggac gcgacaaaag atcttaattt tggcattcgc tatcgttacg actggaaagc
    10501 ttaccgacaa caagacttat ccagtgatat gtctcgtgat aacgttcatc gttgggatgg
    10561 atatgtcact taccatatta atagtgattt caccttcgca tggcaaacga cgctatacag
    10621 caaacagaac gattatcgct atgcaaacca taagaaatgg gcgacggaaa atgcatttgt
    10681 tctacaatac catatgacgc ccgatattac gccatacata gaatatgact accttgaccg
    10741 tcagggtgtt tacaacggca gagataattt atcggaaaac agttatcgca ttggtgtgtc
    10801 atttaaactg tagtagacag gagacagtca caatgaataa aacaataacg gcgcttgcta
    10861 tcatgatggc ttcatttgcc gcaaacgcgt ctgtattacc ggaaactcct gtgccattta
    10921 aaagtggtac cggagcaatt gataacgaca ctgtctacat tggtttaggt agcgcaggta
    10981 cggcatggta caagctggat acacaggcca aagataaaaa atggacagcg ttagctgcat
    11041 tccctggtgg accaagagat caagcaacct ctgcatttat tgatggcaat ctgtatgtgt
    11101 ttggcggcat tggcaaaaac agagagggct tgactcaggt atttaatgac gtacacaaat
    11161 acaaccccaa aaccaatagc tgggttaaat tgatgtcgca cgcaccgatg ggcatggcgg
    11221 gtcatgtgac ttttgtacac aacggcaagg cttatgttac tggcggtgtt aaccagaata
    11281 tcttcaatgg ctattttgaa gatctcaacg aggctggaaa agattcaacc gctgtagata
    11341 aaatcaatgc ctactatttt gacaaaaaag cagaagatta tttcttcaat aagtttctgt
    11401 tgtcttttga tccctcaaca cagcaatgga gttacgctgg cgaatcgccc tggtacggaa
    11461 cggctggtgc ggcggttgtg aataaaggtg ataaaacctg gcttattaat ggcgaagcca
    11521 aacccggatt gcgaacggat gccgtatttg aacttgattt caccggtaat aatttaaaat
    11581 ggaataagct tgctcccgtc tcatcaccag atggcgtcgc tggcggtttt gcggggataa
    11641 gcaatgattc tcttatattt gccggagggg ccggattcaa aggttcacga gaaaattacc
    11701 agcacggaaa gaactatgcg catgaaggcc tgaaaaaatc atatagcact gatattcatc
    11761 tttggcataa cgggaaatgg gataaatcgg gtgaattatc gcaaggtcgg gcctacggag
    11821 tatcattgcc ctggaataat agtctattga ttattggcgg tgaaactgca ggcggcaaag
    11881 cggtgacgga ttcagttttg atctctgtga aggataataa agtcacagta caaaactaac
    11941 gcttcagggc cccagtaaag gggccctgct atcaatttat catttcaatt acgcgaaaat
    12001 tatatggacg caataatatc gcccgattat tactatgttc ttaccattgc tggtcagtct
    12061 aatgctatgg cgtatggcga aggactgcca ttaccggcca gggaagatgc gcctcatccc
    12121 agaattaaac aattagcgag atttgcgcat acgcatcccg gaggcccgtc atgtcacttt
    12181 aacgacatta ttccactaac tcactgccca cacgatgttc aggatatgca gggttatcac
    12241 catcctctgg caacgaatca tcaaacacag tacggcaccg ttggccaggc actgcatatt
    12301 gcacggaaat tactgtcctt tattcctgat aacgcagggg ttctcatcgt tccgtgttgc
    12361 cgtggcggat cggcttttac cgcgggcagc gaagggacat attcagaacg gcacggagcc
    12421 agccatgatg cttgtcgttg gggaacggat actccgctat accaggattt agtcagcaga
    12481 acgcgagccg cactggcaaa aaatccgcag aacaaattcc tcggcgtatg ctggatgcaa
    12541 ggcgaatttg acttaatgac cagtgactac gcgtcacacc ctcaacactt taatcatatg
    12601 gttgaagcct ttcgtaggga tctaaaacaa taccattctc agcttaataa tattactgac
    12661 gcgccgtggt tttgcggcga taccacctgg tactggaaag aaaatttccc tcatgcgtat
    12721 gaagctattt atggcaatta tcaaaataat gttttagcta atattatttt cgtcgacttc
    12781 cagcaacaag gtgaaagagg actgacgaac gcgcctgatg aagacccgga cgatttaatc
    12841 atgggatatt acggttcagc gtaccgctca ccggagaact ggacgacggc actgcgaagc
    12901 agtcatttca gcgcggcagc ccgtcggggg attatttctg acaggtttgt agaagcaatt
    12961 ttgcagtttt ggcgcgaaaa gtgagcgttc attaatttga tttattcgca tccatcaacg
    13021 cttttaactc ctccggcgta aacggtggtt tgcgtcggtg caacatcgca tggcaattag
    13081 ggcacacaag cagcaaaaaa acaaatgaga tcaaggtaat atatcttcac ttgcaggctt
    13141 gaacagcaga aaatttgcga gcatgatcgc aattatttca ctgctaggga tatcaatggc
    13201 ttccagtaaa tcgctacagc aggcaattgc caatataaaa atctggcata agggtgaaca
    13261 gcgcgcaccg cataaaccat tgttattgct atacgtatta gcgggatacc tgaatggaca
    13321 tccacgcctt ttcgattatg gatcggaaat ctacgaacct ctgcacagtt tactggaacg
    13381 ttttgggcca cagcgttcac agtaccgacc tgatatgccg ttctggcgat tacaaggcga
    13441 cggattctgg caattacaca atgccgagct ttgctcaaca gcagggagca gccgacaacc
    13501 gccagtgaag gaactgaacg aataccacgt tgcaggcggt ttcgatgaac agcactacgc
    13561 cctggtaacc ggcaataaaa aactcatcaa tactctagcg caacagatac tcgaagcgca
    13621 cttcaccgag agtattcagg aagaaattgc tgacgagctg ggttttgatc tccagcaaat
    13681 ccgtaaacag cgcgacccgt tatttcgcaa aaatgtatta cgcgcttata actaccagtg
    13741 cgcgatatgt ggctttaata tgcgccacga cgacaccacc gtcgcgctgg aagcggcgca
    13801 tataaaatgg aaacagcacg gcggtccttg tgaaattcct aatggcctgg cgctttgcgc
    13861 aattcaccat aaagcctttg ataaaggatc gattggcctg gacgaaaata tgcgggtact
    13921 ggtatcagat gcagtaaacg gcggagggag cgttgagaga ttattctggg attttgacgg
    13981 gaaaattatt gcgttgccgc aggtgcgtaa aaattaccct tatgaggggt ttgtggagtg
    14041 gcatcggaat gaggttttta gggggtgagg ttgataacta tcgcagtatg ttcaatattg
    14101 ctgacataat cagtgcagga tcttgccgct agtttacaac tcgccttcga tagcggcgca
    14161 aaacgagttc tgttgccgat atcctgggct atggatattc caacagttcc ggcagagttg
    14221 tttaccaagt ttcaggtaag tttttactca gaaccggttg atgcggttta taaggcgctg
    14281 gatgtgaatt aacacattcc tcagcttatt tacaaaagga ttattcccat ttgatataat
    14341 atcagtgcca atttactttt ttcaatggaa tatatctcgg ctaaataaca ataaaactta
    14401 tcgctaatgg attaaataaa caattttcta attcatttca cggtaatgac tccaacttac
    14461 tgatagtgtt ttatgttcag ataatgcccg atgaccttgt catgcagctc
//
LOCUS       DADMIB010000105        14342 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.105, whole genome shotgun sequence.
ACCESSION   DADMIB010000105 DADMIB010000000
VERSION     DADMIB010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14342
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.105"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..619)
                     /locus_tag="JNZ89_002908"
     CDS             complement(<1..619)
                     /locus_tag="JNZ89_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HAY8936716.1"
                     /translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHS
                     MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDS
                     DDKFETHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGET
                     CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSR"
     gene            complement(1007..1753)
                     /gene="cutC"
                     /locus_tag="JNZ89_002909"
     CDS             complement(1007..1753)
                     /gene="cutC"
                     /locus_tag="JNZ89_002909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HAY8936717.1"
                     /translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK
                     SVRQWVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD
                     MPRMEKIMAAAGPLAVTFHRAFDMCANPLNTLSNLAELGIARVLTSGQKSDALQGLSK
                     IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS
                     DAHADEYSRYVVDGAAVAEMKGIIERHQAK"
     gene            complement(1767..2333)
                     /locus_tag="JNZ89_002910"
     CDS             complement(1767..2333)
                     /locus_tag="JNZ89_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707763.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY8936718.1"
                     /translation="MANWQSIDELQDIASDLPRFTHALDELSRRLGLDITPLTADHIS
                     LRCHQNVTAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPG
                     EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEYERLPNP
                     TLAVTDGKTTIKFHPWSIEEIVASEQSA"
     gene            2549..4282
                     /gene="argS"
                     /locus_tag="JNZ89_002911"
     CDS             2549..4282
                     /gene="argS"
                     /locus_tag="JNZ89_002911"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HAY8936719.1"
                     /translation="MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
                     MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS
                     DRLGVSTPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG
                     DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ
                     SGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
                     LAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
                     YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
                     LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
                     AFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLT
                     VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL
                     DTLGIETVERM"
     gene            4459..4947
                     /locus_tag="JNZ89_002912"
     CDS             4459..4947
                     /locus_tag="JNZ89_002912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HAY8936720.1"
                     /translation="MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDT
                     DINVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGVKKPDIEQLNLLKKSQRAWL
                     DFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLT
                     RG"
     gene            complement(5067..5459)
                     /locus_tag="JNZ89_002913"
     CDS             complement(5067..5459)
                     /locus_tag="JNZ89_002913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlhE"
                     /protein_id="HAY8936721.1"
                     /translation="MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLS
                     TRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPL
                     RFIWEVPGGGRLIPPLKVQRNEVIVNYR"
     gene            complement(5459..7537)
                     /gene="flhA"
                     /locus_tag="JNZ89_002914"
     CDS             complement(5459..7537)
                     /gene="flhA"
                     /locus_tag="JNZ89_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HAY8936722.1"
                     /translation="MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFIL
                     DLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHT
                     GAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGM
                     PGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVI
                     NVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD
                     VGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGCEQKA
                     PAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK
                     KFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
                     GEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQE
                     AQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAP
                     IQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGL
                     ADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRH
                     IRMTATIGGK"
     gene            complement(7530..8633)
                     /gene="flhB"
                     /locus_tag="JNZ89_002915"
                     /pseudo
     CDS             complement(7530..8633)
                     /gene="flhB"
                     /locus_tag="JNZ89_002915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416394.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
     gene            complement(8716..9360)
                     /gene="cheZ"
                     /locus_tag="JNZ89_002916"
     CDS             complement(8716..9360)
                     /gene="cheZ"
                     /locus_tag="JNZ89_002916"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HAY8936723.1"
                     /translation="MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA
                     AEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI
                     DLAEARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE
                     RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF"
     gene            complement(9371..9760)
                     /gene="cheY"
                     /locus_tag="JNZ89_002917"
     CDS             complement(9371..9760)
                     /gene="cheY"
                     /locus_tag="JNZ89_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheY"
                     /protein_id="HAY8936724.1"
                     /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
                     KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG
                     ASGYVVKPFTAATLEEKLNKIFDKLDM"
     gene            complement(9775..10713)
                     /locus_tag="JNZ89_002918"
     CDS             complement(9775..10713)
                     /locus_tag="JNZ89_002918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HAY8936725.1"
                     /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
                     IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
                     DFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIA
                     IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE
                     RVLPGHAYIAPGDRHMELARSGANYQIKIHDGPVGMLAMRQAGAWTLAQNEASCVVFG
                     MPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI"
     gene            complement(10716..11528)
                     /gene="cheR"
                     /locus_tag="JNZ89_002919"
     CDS             complement(10716..11528)
                     /gene="cheR"
                     /locus_tag="JNZ89_002919"
                     /EC_number="2.1.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005063150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HAY8936726.1"
                     /translation="MRLPGCSRYSFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRS
                     LGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYR
                     VWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNL
                     TPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMI
                     YFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD"
     gene            complement(11666..12232)
                     /gene="flhC"
                     /locus_tag="JNZ89_002920"
     CDS             complement(11666..12232)
                     /gene="flhC"
                     /locus_tag="JNZ89_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhC"
                     /protein_id="HAY8936727.1"
                     /translation="MSEKSIVQEARDIELITLGARLQMLESETQLSRGRLIKLYKELR
                     GSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQC
                     PQAEEGPLLALTRAWTLVRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPS
                     RAVKRRKLSQNPADIIPQLLDEQRVQAV"
     gene            complement(12235..12585)
                     /gene="flhD"
                     /locus_tag="JNZ89_002921"
     CDS             complement(12235..12585)
                     /gene="flhD"
                     /locus_tag="JNZ89_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhD"
                     /protein_id="HAY8936728.1"
                     /translation="MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMAT
                     TLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVNDLQQIHTGIMLSTRLLN
                     DVNQPEEALRKKRA"
     gene            13363..13791
                     /gene="uspC"
                     /locus_tag="JNZ89_002922"
     CDS             13363..13791
                     /gene="uspC"
                     /locus_tag="JNZ89_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspC"
                     /protein_id="HAY8936729.1"
                     /translation="MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPE
                     MYNQLAAPMLEDLRSVMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHH
                     FDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD"
     gene            complement(13798..>14342)
                     /locus_tag="JNZ89_002923"
     CDS             complement(13798..>14342)
                     /locus_tag="JNZ89_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
                     /protein_id="HAY8936730.1"
                     /translation="QIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ
                     HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT
                     SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI
                     VPRSAESQQRDKVATFPKLA"
BASE COUNT         3687 a         3785 c         3347 g         3523 t
ORIGIN      
        1 tgcgagaagt tttgaaagga taaatatgtg cgccattagt cactgaagta gcggcctgac
       61 tttccagctc atgcgccgcg ttgtcatcca tttttatttc tggcggaaaa tgggcaatgc
      121 ctttatgaca atcgatacag gtttcgccgc ccttttgtgc tttgttatgc attttctgcg
      181 cagattcact ttgcgaggca atatccatgg catcaaaaga atggcaacta cggcacgttg
      241 cagagtcagt tgcttttaat tctttccata ctgtttcggc catttcctgg cgatgagttt
      301 cgaacttatc gtcactgtct attttgccgc taacaaattc atgataaata tctttagatg
      361 cttttaattt agcaaataaa taatccatcc ctgactttgg aatatggcaa tctgcacatt
      421 ccgcacgtat ccctttctgg ttcgaaaagt ggacagttcc ctgatattcc tcaaaaggtt
      481 tactcatcga gtggcaggaa aggcaaaatg ctgtatccga cgttttatgt aaggcttttt
      541 gcgccagcaa taacccgccg ccaccaacca caaccgctat cagcaaaaac aataacccaa
      601 tgcgtttttt ccctcgcata gattcctcta aataaattcc agaacaccga aatcattgga
      661 taattaaata cacaacgaat taaccgcttg cataactcgg cacaacactg cctgaaataa
      721 tcgataaaga atatgattta ttacaatgta atcattaatt gctaaggaat aaccctgttg
      781 ttatttagaa tatatatttg tcagttttag caatttaaac cccataatta atgtgaatat
      841 ataaaatatt tttagcacaa cgctatgttc actgtcaccc gctcaacaga tcacggttat
      901 cgtacgtttt ttatactgct cagggataaa aaaaggcccc tgtcgaaatt gcaggggcct
      961 ggtacgagca agcatcatat tgggcgacat gatgcaacgg taaaaatcat ttggcctgat
     1021 ggcgttcaat gattcctttc atttcagcaa ccgccgcccc gtctacgaca taacgcgaat
     1081 actcgtccgc gtgtgcatct gatgacatgg acaatccttg attacgataa cgcatcggtg
     1141 aagcttgcca cgctcccgcg gagctatgga cttccagcac tccggcatcg aggaagtggt
     1201 gcaggttttc tgcacggact cctgctccgg ccataatgat tggagcatca cgatgggcaa
     1261 taagttccat aatttttgat aaaccttgca gtgcatctga tttttgccct gatgtcagca
     1321 cccgggcgat gcccaattcc gcaagattac tgagtgtatt taaagggtta gcgcacatat
     1381 cgaaggcgcg atgaaaagtc actgccagcg gaccggcagc agccattatt ttttccattc
     1441 gtggcatatc gacattcccg tcaacatcga gcacgcccgt caccagtcca ggaaaaccta
     1501 attcgcggac tgtgcgcaca tcctcaagaa tggcggcaaa ctcaccgtcg ctgtagcaaa
     1561 aatcaccacc gcgtgggcgg ataatcggat gcacagggat cgtcacccac tggcgcacgg
     1621 atttcagtac acccaacgac ggcgttaagc ccccctcttt tggggctgcg cataattcaa
     1681 ctctgtctgc gccgttttgc tgcgccgtta gtgcacattc catgctgtaa cagcaaattt
     1741 ccagtaatgc catttttact ccttaattac gccgactgct cgctggcaac gatctcttca
     1801 atggaccacg gatgaaactt aatagttgtt ttgccatcag tgaccgccag cgtcggattc
     1861 ggtaatcgct catactcacc ttttggcgaa ctggttttca ctgagatccc cggtaggctg
     1921 agtccttcat cagaaagcaa tgccagcgca cgggcattca gcgtttctgg atcacccggc
     1981 agaacgattt caatatgttc ccaaccttcg tgtgggtaac gtttttcccc gggccacggt
     2041 agctccacaa tggaaaactg ccagtgcgca acctgtaccg gttcatgcaa tttaaacaga
     2101 caaatcggtc tgccattgat catattttct gacaaaagct cgccacactg ttcaaaaccg
     2161 cgacgccagc gctcagcggt gacgttttga tggcaacgca aagaaatgtg atcggcagtc
     2221 agcggagtga tatccaaccc cagacggcgg gagagttcat ctaatgcgtg ggtaaatcgc
     2281 ggtaaatccg atgcaatatc ctgcagctcg tcgatagatt gccagttcgc cataatcact
     2341 cttcgtcttt cagtaaaagc gttaatttac cctgttgccc tgcgccaacc aaccgctgat
     2401 ttcacgccgc ttctgatgca atagtgaaaa cggcaatacg ccacgcgcac gttgctgacg
     2461 aaaacagcca tttgcagtat actcccgccc taatttcttt aactggtgcg ggcaattttt
     2521 gctcgcttca tcaatgtaag gtattccggt gaatattcag gctcttctct cagaaaaagt
     2581 ccgtcaggcc atgattgcgg caggcgcgcc tgcggattgc gaaccgcagg ttcgtcagtc
     2641 agcaaaagtt cagttcggcg actatcaggc taacggcatg atggcagttg ctaaaaaact
     2701 gggtatggca ccgcgacaat tagcagagca ggtgctgact catctggatc ttaacggtat
     2761 cgccagcaaa gttgagatcg ccggtccagg ctttatcaac attttccttg atccggcatt
     2821 cctggctgaa catgttcagc aggcgctggc gtccgatcgt ctcggtgttt ctacgccaga
     2881 aaaacagacc attgtggttg actactctgc gccaaacgtg gcgaaagaga tgcatgtcgg
     2941 tcacctgcgc tctaccatta ttggtgacgc agcagtgcgt actctggagt tcctcggtca
     3001 caaagtgatt cgcgcaaacc acgtcggcga ctggggcact cagttcggta tgctgattgc
     3061 atggctggaa aagcagcagc aggaaaacgc cggtgaaatg gagctggctg accttgaagg
     3121 tttctaccgc gatgcgaaaa agcattacga cgaagatgaa gagtttgccg agcgtgcacg
     3181 taactacgtg gtaaaactgc aaagcggtga cgaatatttc cgcgagatgt ggcgcaaact
     3241 ggtcgacatc accatgacgc agaaccagat cacctacgat cgtctcaacg tgacgctgac
     3301 ccgtgatgac gtgatgggcg aaagcctcta caacccaatg ctgccaggaa ttgtggcgga
     3361 tctcaaagcc aaaggtctgg cagtagaaag cgaaggggcg accgtcgtat tccttgatga
     3421 gtttaaaaac aaggaaggcg aaccgatggg cgtgatcatt cagaagaaag atggcggcta
     3481 tctctacacc accactgata tcgcctgtgc gaaatatcgt tatgaaacac tgcatgccga
     3541 tcgcgtgctg tattacatcg actcccgtca gcatcaacac ctgatgcagg catgggcgat
     3601 cgtccgtaaa gcaggctatg taccggaatc cgtaccgctg gaacaccaca tgttcggcat
     3661 gatgctgggt aaagacggca aaccgttcaa aacccgcgcg ggtggtacag tgaaactggc
     3721 cgatctgctg gatgaagcct tggaacgtgc acgccgtctg gtggcagaaa agaacccgga
     3781 tatgccagct gacgagctgg aaaaactggc taacgcggtt ggtattggtg cggtgaaata
     3841 tgcggatctc tccaaaaacc gcaccacgga ctacatcttc gactgggaca acatgctggc
     3901 gtttgagggt aataccgcgc catacatgca gtatgcttac acgcgtgtat tgtccgtgtt
     3961 ccgtaaggca gaaattaacg aagagcaact ggctgcagct ccggtaatca tccgtgaaga
     4021 tcgtgaagcg caactggcag ctcgcctgct gcagtttgaa gaaaccctca ccgtggttgc
     4081 ccgtgaaggc acgccgcatg tgatgtgtgc ttacctgtac gatctggctg gtctgttctc
     4141 tggcttctac gagcactgcc cgatcctcag cgcagaaaac gaagaagtgc gtaacagccg
     4201 tctgaaactg gcacaactga cagcgaagac gctaaagctg ggtctggata cgctgggtat
     4261 tgagacagta gagcgtatgt aatcgatttt tcgtgagagt aaagcctgat cagggttacc
     4321 tgatcaggct tttttattgc catctaaatg tattctgaaa atggacatgc cattgttttc
     4381 tgactgttgg ataagaggcc agaagcgtaa tatccggccc cagggaaacg ataacggttg
     4441 aatttaagga ataccgcagt gtttaaattt cttgtattaa cattaggcat tatctcttgc
     4501 caggcttacg cagaagatac ggttatagta aacgaccatg acatttcagc catcaaagat
     4561 tgttggcaaa aaaattcaga tgatgatact gacattaacg tgatcaaatc atgcctgcga
     4621 caagaataca atctcgtcga tgcgcaatta aataaagcct atggtgaagc ttatcgttat
     4681 atagaacaag tgccacgcac aggtgtaaaa aaacctgata tcgaacaact taacttgctt
     4741 aaaaaatcac agcgagcctg gctggatttt agggacaaag aatgtgaatt aatcctttca
     4801 aatgaggacg ttcaggattt aagtgaccct tattctgaat cagaatggct ctcatgtatg
     4861 atcatacaga ccaatacgcg aactcgccag ttgcagctat accgtaactc tgaagatttt
     4921 tatccaagcc ctttgacaag aggataattc acatcttttt ggcatgtttt gttgcaagct
     4981 attcctgata aataattgca acaagacatc gagccttttt cactgagtta ttaaacatac
     5041 tcgcgagcgc gtaatttttt tgtccttcag cgataattca caatcacttc attacgttgt
     5101 acctttagcg gtggaattaa ccgcccaccg cctggcactt cccagataaa tcgcaacggt
     5161 tctgctgccg ctataccgga aaaggccacg gtggttccgc tctgcccctc taattcgaca
     5221 caacgagatt gcgaacacaa gcgaacccgc agtcctgaag gtgtcgggcc gataagctga
     5281 taacgccacg ctaccagcgt catcaatcct gaagcaggtt gtcgcgtaga aagaggcgca
     5341 gacgacatcg actcaccgcg atgatttagc gtaattccta cactacttgc ctgccacatc
     5401 ccctccccgg cggcttgcac cagcagcgga aacaataata ttgctaataa ggttctcatt
     5461 atttgccgcc aattgtcgcc gtcatgcgga tatgtcggtt atcagacagt tccagattcg
     5521 acaggaccac taactgcggc aagctgcggc gcaggaagcg agacaataat ggtcgcagcg
     5581 cgtggttcac caacaatact ggcggcgcac ccagcatctc ctgacgggat agcgcttcct
     5641 gagtttgcgc cagtaaacga tccgccagcc ctggctccag tcctcccccg ccctgcagcg
     5701 cctgtagtaa caaacgttcc agcggtgtat cgaggccaat aacatggact tcatctttgc
     5761 caggaaacca ctgctgggta atcgcccgtc ccaacgccac gcgcacgacg gcggttaatt
     5821 catgtggatc gctttggatg ggcgcatgtt ccgccagcgt ttcgagaatg gtgcgcatat
     5881 cgcgaatcgg tactttttca tcgaggagat tttgcagcac tttatgcagt gtggtgagcg
     5941 tgacgacgcc aggaacgaga tcttccgtca gctttggcat ctcctgggcg acgcgatcca
     6001 acagctgttg cgcctcctga cgaccaaaca gctctgcggc atgctggcta atgaggtggt
     6061 taagatgcgt tgctaccacc gtgctggcct caaccactgt gtacccctga atctgcgcct
     6121 gttcttttag cgcactttca atccagatag cattcaggcc aaatgccgga tcgacggtcg
     6181 cctcaccagg taacgtcccg gcagcggttc cagggttaat cgccaaccag cgccccggat
     6241 aagcatcacc actgccaatc tccacgcctt tcatcaaaat gcgatagcgg gcaggttgca
     6301 gatccatatt gtcgcgaatg tgcaccactg gcggcagaaa tcccatctcc tgggcaaatt
     6361 tcttgcggat actgcgtata cggcccaaca actcaccatc ctgctggaaa tcgaccatcg
     6421 ggatcagtcg ataacccact tccattccca gagaatcttc cagttgtaca tcgttccacg
     6481 tcgcttcgac aacggtatta ttctctgcca tttttaccgg tttgggttcg gcaggcgctt
     6541 tttgttcgca tccgcgtatc caccaggcca gccccagcaa tccggcagtg aacagcaaaa
     6601 ataccaggtt cggcattcca ggcaccaagc cgagtaaacc gagcacggcg gcgcttaaca
     6661 acataacgct tgggttactg aaaagctgat tcaccatctg ctcgccaaca tcctgatcgg
     6721 tgctgacacg cgtaacgatg acccccgcgg cggtagaaat caccagcgcc ggaatttgtg
     6781 ccaccagacc gtcgccaatg gtcaatagcg tataactttc cgccgcgtgt cccatgctca
     6841 tgccatgttg cagcacgccg accagcaacc cgccgacaac gttaatgacc atgatgagga
     6901 tcccggcgat ggcatcgccg cgaacaaact tacttgcccc gtccattgag ccgtaaaaat
     6961 cggcttcctg agtcacttcg gagcggcgtt ttttcgcctc atcttcacca atcaatccag
     7021 cgttaaggtc ggcgtcaatc gccatctgct tacccggcat accatcgaga acaaagcgcg
     7081 cacccacttc tgcgatacgc ccggcacctt tggtaatgac cataaagttg atgatcacga
     7141 gaatgacaaa caccacgata cctatagcga aattgccacc aacgaggaag tgaccgaacg
     7201 cttcgaccac cttccctgcc gccgccgcgc cggtatgccc ttccatcaaa atgatacggg
     7261 ttgaagccac gttaagtgcc agacgcaaca acgtagtaaa caacagaatg gtcggaaacg
     7321 cagcaaactc aagcgtgcgc tgggtaaaca tcgccaccag caacaccatg atcgacaagg
     7381 caatattgaa ggtaaacaac aggtcgagta tgaatgcggg cagtggcagc accatcatcg
     7441 acaagatcaa caggatcaaa atcggtccgg caaggatctg ccattgtgtc gatttcaggt
     7501 ttgcgggcag gcgcagcatc gcggccagat tactcatggg tcggtttctc gttaataaaa
     7561 tccagggctt ccggcaccgg aagatgagta ggttgtacag ggcgctgtcc accagccaga
     7621 cgccagcgtt tcagttgcca gatccaggcc agcacttccg ccaccgcggc gtacagttga
     7681 cccgggattt gttgaccaat ctccgcatgt cgatacagcg ctcgcgccag cggcggcgct
     7741 tcaagcgtcg ggacgttatt ttcagcgcca atttcacgaa tgcgcagcgc gaccagccct
     7801 gcacctttag cgaccacttt cggtgcgctc attttgtttt cgtcatactg caacgctacc
     7861 gaatagtggg tcgggttatt gacaatgaca tccgctttcg gcacatcggc catcatccga
     7921 cgccgtgcgg cagctcgctg catctgacgg atccgtcctt taacatgggg gtcgccttcg
     7981 ctttgtttga actcatcacg aatatcctgc cgcgacattc gcagcttttt caggtggctg
     8041 aagatttgga aaaagacgtc aaatcccacc attggaatga caccaagcac caccagcagt
     8101 gcgcatagcc ctaccaaatc catcgcatta cccatggcgg taatcggaga ctcggccagt
     8161 aagcgcatca tctgcggcca gtgatgccag agaaaaaacc ccgtcacgct gccaaccaag
     8221 atggttttca aaattgcttt aagcaactcc gcgccagtct gtgccgagaa catccgttta
     8281 atgcccggta gcgggttgag tttggaaaac ttcggctgca aggattttcc gctaaatacc
     8341 agccccccca gcatgaccgg agaaatgagc gctaccagca ccacgccgct aatcagcggt
     8401 agcagcgcca gcatggcttc tctgatcagc agaataatct gcccgaggat cagattcggg
     8461 tctttgataa tactgtgatc aaaatgcagc ccagcggaga gcatgcccga caatcgacgg
     8521 gccagcgaca caccgccgaa ccagataaca cacacgccca ccagcaaaat cagcagtgag
     8581 gtcagttcac gggaacgcgg gatttagggc ttttgctgcc acacatcaag catagtgtgc
     8641 gtttgtcgga tgcggcgtca tcgccttatc agaccgcctg atatgacgtg gtcacgccac
     8701 atcaggcaat acaaatcaaa atccaagact atccaacaaa tcgtccacct gatcctgact
     8761 ggctaccaca ccggctttgc tggtatcgac ctgaggtcca ttaagcaaac tctggttttc
     8821 acgttttgga cgcgactcct gttccgggat gttttccaac agcaccatca gcaactggcg
     8881 ttcgatctcc tgaatgacat ccatcatccg cttaataacc tgcccggtga gatcctgaaa
     8941 atcctgcgcc atcatgattt ccagcagttg cgcgttagta aagctggtat gcgcgggtac
     9001 atctgccaga aattgtcgtg tatctgttac cagttcacgg gcctcggcaa ggtcaatcgg
     9061 atcggcaaac cagtcatccc aacgttgggt taacgctttt gctgatttct ccatttgatc
     9121 ctgatgcggt tgtgacgcct caacactgtt cagcgcccgc tccgcagcct gggcggtcat
     9181 ctgcacaaca tagtacaaac gatcgcgcgc atcggggatg gcttccgccg cttcggcaat
     9241 ggcctgatcc agccccagtt cccgcaaact gtcgcgcagc atacgcgtca ggctgccgat
     9301 gcgcgcaatg atatcgccag ctgaatgctc gtcagcaggt ttgattgatg gttgcatcat
     9361 agtcgcatcc tcacatgtcc agtttatcaa agattttgtt gagtttttcc tccagcgtcg
     9421 cggcggtaaa tggcttcacc acatagccac tggcccccgc ttgcgccgca gcaatgatgt
     9481 tctctttctt cgcttctgca gtcaccatta acactggcaa tgccgacatc gcgccatccg
     9541 cacgaattgt tttcagcaat tccaggccat ccatattggg catgttccag tcggagataa
     9601 caaatccata accgcctgcc tgcaacttat tgagagcgtc gacgccatct tccgcttcct
     9661 caacattatt gaatcccagc tctttcagca ggttacgcac tatgcgtcgc atggtggaaa
     9721 agtcatccac aaccaaaaat ttaagttctt tatccgccat ttcacactcc tgatttaaat
     9781 acgtatcgcc tgtccggcac taatttttgc caacatttgc tggcttacct ggctaagatc
     9841 gaccacttcg cagacaccac ccatattgat ggcctcgcgc ggcatgccga acaccacgca
     9901 acttgcttcg ttttgcgcaa gggtccatgc ccccgcctga cgcatcgcca acattcccac
     9961 cgggccgtcg tgaattttga tttgataatt tgcgccacta cgcgccagtt ccatatgccg
    10021 atcgcccggc gcaatatagg catgccccgg caagacacgt tctccgtctt cggcttcttt
    10081 aaccccgatc tggcaaagct tattaagtct gtcggcaaaa gagcgggtga aaccgggcgg
    10141 catatgttgg gtaattaaca atgccgggct ggaaagcggc aacggttgca gtacgtgacg
    10201 aattgcctca gttccacccg ttgaagcacc aatcgcaatc agtttttcag aactcaacaa
    10261 cggacccgcc ttcagcgttg tcggtgctga caatggctta tgtgctgcaa ggctcgcctt
    10321 tgctgccgta cgcacctttt cagcaatcat ttcgctatac gccagcattc cttcgcgaat
    10381 acccagttgc ggtttggtga caaaatctat tgcccccagc tccagcgcgc gcagcgtgac
    10441 ttctgatcct ttgccggtca aggaagaaac catcacaacg ggcattggac gcaaacgcat
    10501 taatttttcg aggaaatcca gtccgtccat ccgcggcatt tcaacatcca gcgtcagcac
    10561 atcgggattg aatttcttaa tcaagtcacg cgcgaccagc ggatcaggcg cggtcgccac
    10621 catttccatg tcgctatggc tgttgatgat ttctgtcatg atctggcgca tcagtgccga
    10681 atcatcgaca gataacaccc tgattttgct catcgttaat ccttacttag cgcatacacc
    10741 gtctgaccac gcagcgtgaa gcggcgctca aggtggctaa agttttcaga gtgacccgca
    10801 aacagcaatc cgtcgggttt aaggagcgga acaaagcggc gcaaaatctc ctgctgggta
    10861 ttttgatcga agtagatcat gacgttacga cagaagatcg catcaaacgg ccccggcacg
    10921 gtgtactgtt tcgccagtag attcagcggg gcaaaatcaa catagttcgc cagctcctga
    10981 cgcacgcgta ccagcccttc atgcggtccc gtccctcgca tgaaataccg ttgcagttgc
    11041 tgcggcgtca ggtttttcaa ctcttcatgg cgataaatac cgcttctggc tttttccagc
    11101 acttcggtgt cgatatcact ggcaaacact ttccagcgtc cgggcgcggt gcccaatgtg
    11161 tcagccagcg tcatcgcaat gctgtacggc tcttcgccgg ttgaagccgc cgcgctccat
    11221 acgcgatact cgccagaacg gcgacgtgcg tgatccgcga gcagagggaa atgatgtgcc
    11281 tcacggaaaa atgccgtcag attcgtggtc agcgaattga taaacgcctg ccactcaccg
    11341 ctgtgctgat tagattccag caagttcaga taatgaccga aatccgtcag tcccagcgaa
    11401 cgcaaacgac gaaccagtcg gttgtaaacc atgtcgcgtt tatgatcggc caggacgatc
    11461 ccggctcgtt gatagatcaa ttgacttatc cgccgaaaac tgtaccgaga acaaccaggt
    11521 aacctaataa gataagcacg acatcatcct tccactgttg accatgacag gatgttcagt
    11581 cgtcaggcgt taacgcgcga ttggggcaaa aaaaagcagc ggtacgtcgt taccgctgct
    11641 ggcatgttgc gccacaccgt atcagttaaa cagcctgtac tctctgttca tccagcagtt
    11701 gtgggataat atcggcagga ttctgggaaa gtttacgtct ttttactgcc cgggatggcg
    11761 gttgacataa gctgcaggca aagctgccaa caggctggtg agcgtgggta ataaaattgc
    11821 cgccgcagca gttgcagctg gaaagttgca gtaatccact ttcaacaaac cgcaccaatg
    11881 tccaggcacg ggttaatgcc agcagtggtc cttcttctgc ttgtgggcac tgttcaaggt
    11941 ataaacggta ggctttgatc accgcatcga cgccattaca caaacctgtt ttcagtaaaa
    12001 actgccatgc attacagaac atcgaagcat gaacgttttg ttcccaggtc ataaaccagt
    12061 cggttgagaa tggcagcatg cctttcggcg gtgggcttcc gcgcagttct ttataaagtt
    12121 ttatcaggcg tccgcgactt aactgtgttt cgctttccag catctgcaaa cgagcgccca
    12181 gggtgatcaa ttcaatatcc cgcgcttcct gaacaatgct tttttcactc atgatcaggc
    12241 ccttttcttg cgcagcgctt cttcaggctg attaacatca ttcagcaagc gtgttgagag
    12301 catgatgccg gtatgaattt gctggagatc gttaacgcgg gaatcttgcg tcaactgagt
    12361 aatcgtctgg tggctgtcaa aacggaagtg acaaaccagt tgattggttt ctgccagctt
    12421 aaccatttgc ggaagagtca gtgccgctaa cgttgtcgcc atttcttcat ttatgccgag
    12481 acgaaacata gcggacgctt tgtcctgaac aatcaaacgc tgtgcaagta gtaaatatga
    12541 caagttgatg tcataaatgt gtttcagcaa ctcggaggta tgcattattc ccacccagaa
    12601 taaccaactt tatttttatg cggtttcacc gcaccccgtg atgtcgccgg gaagccccgg
    12661 taaaaaataa ttagcattag aatagtgcga taagctgcaa taagcagaac cacctttttg
    12721 gtttaatatg tccttacaaa tagaaatggg tctttacact tatctaagat ttttcctaaa
    12781 tcgacgcaac tgtactcgtc actacacgca catacaacgg agggggctgc gattttcaat
    12841 aatgtgtgat gcagatcaca caaaacactc aattacttaa cataaatgta taagccatac
    12901 ttttgttttg ggtgtatttc aatctgttaa aaagtttttc gctacgctag caagcaaaaa
    12961 tgaaactgga ataatcgaaa tgggatgttg cgcacagtta aaataactca ccgtaaataa
    13021 tcatctgcta taaataatca ctttcatgca ataccagata agctattttt aaacagacac
    13081 ttaccgcaca acaaactaat taaatacaaa gaaaggcaac aatcaactta atgttaatga
    13141 aatgttttac atatattaac cacttgttta atgcggagaa tcagtacact attttcttat
    13201 aattacattt gaaattatat gatcaccggg agtgattgat taattgtctt tactaataat
    13261 cagactaata tttacctgtt tgaccgagtt gggattgcgt cgtttctcca ttaggagtaa
    13321 agctttaatg tcacctgaag ttcacagaat aaggaacagg ttatgagcta tagcaatatt
    13381 cttgtcgctg ttgcggttac accggaaagt cagcaactgc tggcaaaagc ggtatctatc
    13441 gccaggccag taaagggaca catcagttta attactctcg cttccgaccc ggaaatgtac
    13501 aatcaattag ccgcgccgat gcttgaagat ttacgcagcg tgatgcaaga agaaacgcaa
    13561 agctttcttg ataagttaat tcaggatgcg gggtatcccg ttgacaagac gtttattgcc
    13621 tacggtgagt taagcgaaca tattctggaa gtatgtcaca aacatcattt cgatttggtg
    13681 atttgcggta atcacaatca cagtttcttt tcgcgagcat cctgctcggc gaaaagagtg
    13741 attgcctcaa gtgaggtcga tgtgctgtta gttccactta cgggtgatta accgctccta
    13801 cgcaagcttt ggaaaggtag caactttatc gcgctgctgg ctttccgcgc ttcgcggaac
    13861 tatctgcttt aggtcgctaa tgaagcactc ctgccagtgg ttaatatcgt ttttcacgat
    13921 aacgtccagc atttctgcat gacgggaaat acgttccgcc agcgacatag tcaatgcacg
    13981 atccagcgca gctgcaactt cgtcacgatc gtaggggtta acaattaacg ccgacgttaa
    14041 ctcgtttgcc gctcccgcaa attgcgaaag aacaagaacg cccgggttgg ctgggtcctg
    14101 agcagcaaca tactcttttg ctaccaggtt catcccgtca cgcagtggcg tcactaagcc
    14161 cacgtcagag tagcggaata ttttcatcag taatttacgg tcaaaatgct gattcaaata
    14221 ataaagcggc gtccagccta attgcccgta tttaccatta attcgtccag cttcattttc
    14281 gagctgatga cgaatatcct gataggcttg cacatcacca cgcgacgttg gtgcaatctg
    14341 gg
//
LOCUS       DADMIB010000106        14222 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.106, whole genome shotgun sequence.
ACCESSION   DADMIB010000106 DADMIB010000000
VERSION     DADMIB010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14222
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.106"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            505..1329
                     /gene="gadX"
                     /locus_tag="JNZ89_002924"
     CDS             505..1329
                     /gene="gadX"
                     /locus_tag="JNZ89_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadX"
                     /protein_id="HAY8936731.1"
                     /translation="MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV
                     DKCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQ
                     NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT
                     LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY
                     HSVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQGNFYGTDRSAEGIRL"
     gene            1697..2425
                     /gene="gadW"
                     /locus_tag="JNZ89_002925"
     CDS             1697..2425
                     /gene="gadW"
                     /locus_tag="JNZ89_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadW"
                     /protein_id="HAY8936732.1"
                     /translation="MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFC
                     SPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESG
                     VNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAE
                     RMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYF
                     INTFRQYYGVTPHQFAQHSLGTFS"
     gene            complement(2788..5901)
                     /locus_tag="JNZ89_002926"
     CDS             complement(2788..5901)
                     /locus_tag="JNZ89_002926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HAY8936733.1"
                     /translation="MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTIT
                     VSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDI
                     AQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVAS
                     NIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQ
                     LGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYS
                     TVARYNGKPAAGIAIKLATGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIE
                     ISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLS
                     AVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPN
                     ALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEED
                     QGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGL
                     AFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMEL
                     LDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVA
                     LSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAP
                     LSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYS
                     WTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLAT
                     DLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIGAIIEAARMRLRP
                     ILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHL
                     FARFKKA"
     gene            complement(5926..7083)
                     /gene="mdtE"
                     /locus_tag="JNZ89_002927"
     CDS             complement(5926..7083)
                     /gene="mdtE"
                     /locus_tag="JNZ89_002927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtE"
                     /protein_id="HAY8936734.1"
                     /translation="MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPG
                     SVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELN
                     SAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAV
                     EQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQD
                     FLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIF
                     PNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIE
                     ASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ"
     gene            7143..7421
                     /locus_tag="JNZ89_002928"
     CDS             7143..7421
                     /locus_tag="JNZ89_002928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936735.1"
                     /translation="MRDLQTSGIVGLSASKVGYRHSDRHGEVNDKKNVAVLPTVPASI
                     RATKGSTGGYTYQGNKVVLASPLVITGGNEISICIPRHASHQFQLLMS"
     gene            complement(7422..7949)
                     /gene="gadE"
                     /locus_tag="JNZ89_002929"
     CDS             complement(7422..7949)
                     /gene="gadE"
                     /locus_tag="JNZ89_002929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadE"
                     /protein_id="HAY8936736.1"
                     /translation="MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVI
                     IDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEIT
                     YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITLTLNISQQTLKIQKFNIMYKLKL
                     RRMSDIVTLGITSYF"
     gene            complement(8748..9320)
                     /gene="hdeD"
                     /locus_tag="JNZ89_002930"
     CDS             complement(8748..9320)
                     /gene="hdeD"
                     /locus_tag="JNZ89_002930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-resistance protein HdeD"
                     /protein_id="HAY8936737.1"
                     /translation="MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFV
                     SGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPEL
                     GIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVS
                     VTLVSTLVGIELIFSAASLFSFASLFVKQQ"
     gene            9575..9907
                     /gene="hdeA"
                     /locus_tag="JNZ89_002931"
     CDS             9575..9907
                     /gene="hdeA"
                     /locus_tag="JNZ89_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeA"
                     /protein_id="HAY8936738.1"
                     /translation="MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLA
                     VDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE
                     WDKIKKDM"
     gene            10023..10349
                     /gene="hdeB"
                     /locus_tag="JNZ89_002932"
     CDS             10023..10349
                     /gene="hdeB"
                     /locus_tag="JNZ89_002932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeB"
                     /protein_id="HAY8936739.1"
                     /translation="MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFID
                     LNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQA
                     SNDLPN"
     gene            10413..11060
                     /locus_tag="JNZ89_002933"
                     /pseudo
     CDS             10413..11060
                     /locus_tag="JNZ89_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
     gene            complement(11102..11632)
                     /locus_tag="JNZ89_002934"
     CDS             complement(11102..11632)
                     /locus_tag="JNZ89_002934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8936740.1"
                     /translation="MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDGMLHQNAFVI
                     IDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALI
                     NGSYCSVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKITLKTFYCHKHNIMMILNL
                     KRINELVRHQHIDYLV"
     gene            complement(11788..12354)
                     /gene="slp"
                     /locus_tag="JNZ89_002935"
     CDS             complement(11788..12354)
                     /gene="slp"
                     /locus_tag="JNZ89_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein Slp"
                     /protein_id="HAY8936741.1"
                     /translation="MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQ
                     PGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFL
                     DPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
                     YGAFWPEPGWGAPYYTNAVSQVTPELVK"
     gene            complement(13032..13826)
                     /locus_tag="JNZ89_002936"
     CDS             complement(13032..13826)
                     /locus_tag="JNZ89_002936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000020601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936742.1"
                     /translation="MSIDFTPGIINTYHGNIYNCTTNTDNVKTPDTPKWPCDNWEEQQ
                     PINSTFSGEGYNPEQFDLAQQQLQQINACHTNTTYTNADYSKVVVQLVSLINNIETIS
                     STPLTQQTQSILNQINNIRYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSV
                     QTIFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNM
                     TGQNLSGFALTLSRFYFEDLLNINFTDANLGDTIFYIKNTLPPQII"
BASE COUNT         3945 a         3019 c         3155 g         4103 t
ORIGIN      
        1 attatgtgtc gtcgcggctt cgaaatggac tttgctgaac tgttgctgga agactacaaa
       61 gcctccctga aatatctcag cgatcacccg aaactgcagg gtattgccca gcagaacagc
      121 tttaaacaca cctgataaca taacgttgta aaaaccgaat gcccagcctt taaaaaaaca
      181 gctgggcatt cggttgctta ttaatcgcaa taatatattg gctgtctatt catcgtgttg
      241 ataagatata tgttatatga atgtttatta aatgtagcga ttgcctttaa tgtcacgaaa
      301 agggattatt tgcttgctat taatttcact gcgttcttaa ccgcgttttt gtattataaa
      361 tccagtcatc ctgcccgtag aacatcacac attatcatcc tgttctcccg cttcgtttaa
      421 atttatttat caatcaattt gacttaagag ggcggcgtgc tacattaatt aacagtaata
      481 tgtttatgta atattaagtc aactatgcaa tcattacatg ggaattgtct aattgcgtac
      541 gcaagacata aatatattct caccatggtt aatggtgaat atcgctattt taatggtggt
      601 gacctggttt ttgcggatgc aagccaaatt cgagtagata agtgtgttga aaattttgta
      661 ttagtatcaa gggatacgct ttcattattt ctgccgatgc tcaaggagga ggcattaaat
      721 cttcatgcac ataaaaaaat ttcttcatta ctcgttcatc actgtagcag agatattcct
      781 gtttttcagg aagttgcgca actatcgcag aataagaatc ttcgctatgc agaaatgcta
      841 cgtaaaagag cattaatctt tgcgttgtta tctgtttttc ttgaggatga gcactttata
      901 ccgctgcttt tgaacgtttt gcaaccgaac atgcgaacaa gagtttgtac ggttatcaat
      961 aataatatcg cccatgagtg gacactagcc cgaatcgcca gcgagctgtt gatgagtcca
     1021 agcctgttaa agaaaaaatt gcgcgaagaa gagacatcat attcacagtt gcttactgag
     1081 tgtagaatgc aacgtgcttt gcaacttatt gttatacatg gcttttcaat taagcgagtc
     1141 gcagtgtcct gtggatatca cagcgtgtcg tatttcattt acgtctttcg aaattattat
     1201 gggatgacgc ccacagagta tcaggagcga tcggcgcagg gattgccgaa ccgtgactcg
     1261 gcggcaagta ttgttgcgca aggaaatttt tacggcactg accgttctgc ggaaggaata
     1321 agattataga attttactca gacataaaaa aaacctggca taggggaccg ggaagaggat
     1381 agtctgccgt ctccagacta ataaaccgct ataacactcc ctgttggcac gggaaacttt
     1441 gtgctctcag taagttaaat ataactttta ctggaaataa gatcagccat ttttttataa
     1501 acataagcta tacgctgtgc gaaaatatat tcgtgctgca tttacttatt atcaattaac
     1561 tgttatgcaa aactactttg tggataaatt ttggtcctac caaatctggc agtttttgcg
     1621 ctaagaaaca gtctggcaac atttcattag tatactgaaa ttgaaataat cgcagtatga
     1681 aatataaggg ataatcatga ctcatgtctg ctcggtgatc ctcattcgtc gttcattcga
     1741 tatttatcat gaacagcata aaatatcgct gcataacgag agtatcgtgc tgctggagaa
     1801 aaatttggca gacgattttg cgttttgttc accggatacg cgacgactgg atatcgatga
     1861 gctgacagtt tgccattact tacaaaatat tcgtcagcta ccacgcaatt tagggttaca
     1921 tagcaaagac cgtctattaa ttaaccagtc accccccatg ccgctggtga cggcgatttt
     1981 tgatagcttc aatgaatccg gggtaaattc accgatactg agcaatatgc tctacctttc
     2041 ctgtttatcg atgttttctc ataagaaaga actgatcccc ttacttttca atagcatcag
     2101 cactgtttca ggaaaagttg aacgccttat tagctttgat atcgccaaac gttggtatct
     2161 gcgcgatatc gcggaaagaa tgtataccag cgagagtctc atcaaaaaaa agttgcagga
     2221 tgaaaatacc tgtttcagta aaatattact cgcttccagg atgtcgatgg ccagacgatt
     2281 actcgagtta cgtcaaattc ctctgcatac tattgcagaa aaatgtggct atagcagtac
     2341 gtcgtacttt ataaacacat ttcgacaata ttatggtgta acgccacatc agtttgcgca
     2401 acattcgcta ggtacctttt cctgacatat tttgcatttg aatattggtc aggatctcac
     2461 acctgcttca tgtgaaactc ttccctgatg atttctgccg ggctaccggc tagttctctt
     2521 tcgcagtttg ccaggcggta taggtatttt caggaggaaa agactcggca tgtttgggat
     2581 tattaagctg acaattcata cgattacggg aatgtgggtc agtattgtgc tgttcaaatt
     2641 gatgacgaat ggctggagtg gtttctactt tcagtgctgt gtactaagcc tggtattcct
     2701 gacggttagc tggttgttga gtggtgaatg gttagcagga aagagtaagg ctgaaccttc
     2761 acgttcaacc ttactctcat ttacacgtta cgctttttta aagcgggcaa agagatgttc
     2821 cactacaacg aaaaagaccg gaacgaagta aattgccagc actgttgcgg caaacatccc
     2881 gcccatcacg ccggtaccta ccgcgttttg cgcgccagaa ccggcaccat gactgataac
     2941 cagcggcagc acgccgagaa taaaggccag agaggtcatc aggattgggc gtaaacgcat
     3001 ccgcgccgct tcgatgattg cccctatcgg cgttttccct tctttctgca tcatctcaac
     3061 ggcaaattcg acaatcagga tggcgttctt ggcggaaagc ccgatggtgg tcagcaaacc
     3121 aacctggaag tagacgtcat tacttaagcc gcgcagatcg gtggccagta atgcgccaac
     3181 gacgcctaac ggaacaacca acatcaccga gaacggaatt gaccagctct catagagtgc
     3241 ggcgagggcg aggaacacca cgaccagtga aatggcatac agtgcaggag cttggtttga
     3301 ggataacgct tcctgatacg acagtccggt ccatgagtag ccgacgcctg ccggaagttt
     3361 agcgaccagg tctgccataa atttcatagc gtcaccggta cttttcccgg ccgccgcttc
     3421 acctaaaatc tccattgacg ggatgccgtt gtagcgttcc aatcgcggtg aaccataggt
     3481 ccattcggta gacgagtagg cagaaagcgg tgccatcgtg ccagaggcgt tgcgtacata
     3541 ccattggttg atgttatccg gcaacatacg gaacggcgtg cctgcctgga catacacttt
     3601 tttcacccgc ccctggttga ggaagtcgtt cacgtagctg ctgccgaagg cggtggaaat
     3661 tgtctggttg atatcagaca gcgccacacc cattgcctca gctttcgcgg cgttgacgtt
     3721 cactttgaac atcggcgtat cttccaggcc gttcgggcgt accccggtga cctggtcagg
     3781 cgattgcgct gccagtgata acagctcgtt tcgtgcctgg gttagttttt cgtgccccag
     3841 gttaccgttg tccagcagtt ccatatcaaa acctgacgcg gtacccagtt cagccaccgc
     3901 gggtaagttg aacgggaaga cgacggcttt attgatactg cttaacgcaa tcattgcccg
     3961 ctgaatgatc gcggtaaccg agttttcctc accgacacgt tcagaccacg gcttgagact
     4021 gataaacgcc aggccgttgt tttgcccctg gccgctgaag ccaaagccgc caacggtaaa
     4081 caccgactga acattatctt tctcttttgt aagataataa tccgtcacct gttgcagcac
     4141 tttcgtggtg ttaaccatgg tggcaccgga aggtaactgc gcggtggtca taaatacccc
     4201 ctgatcctct tctggtaaga aagaggtcgg tgtacgcagg aacagcaccg ccatcccggc
     4261 gcaaatcagc aggtagacca ccatgtagcg accggtacaa cgcaacagcg agcgggtgct
     4321 atcggtatag tgctgagttg atttttcaaa cagcgtgttg aagcgtgcga acagggcgtt
     4381 aggtttgtga ccgccttccg gcgcggcttt cagaatggtg gcgcacaggg caggggtcag
     4441 gctcattgcc acaaatactg aaagcagcat ggaggagatc agcgtgatgg agaactggcg
     4501 gtagatctcc ccggttgcgc cgctcataaa ggccatcggc ataaacactg cggaaagaac
     4561 aacagcaata ccgaccagcg cacgttggat ctgccccatc gatttatgcg tcgcttcctt
     4621 cggtggtagc ttatcttccg caatgacacg ctcgacgttc tccaccacca cgatggcgtc
     4681 atccaccagt aaccctatcg ccagcaccat cccgaacata gttaacgtgt tgatggtgaa
     4741 accgaccgcc gacaagatcg caaacgtccc gagaataacc accggtacgg caatcgtcgg
     4801 gatgattgtg gcacggaaat tctgcaaaaa cagatacatg accaggaaga cgaggatgat
     4861 agcctcaacc agtgttttaa aaacttcctg aatagaaatt tcgataaacg gcgtggtgtc
     4921 gtaaggataa accgtcttca gacttgcggg gaaataggct gataagcggt tcagctcctc
     4981 tttgactgcc cgcgaggtat ccagggcgtt tgctccggta gccagtttga tggcgatccc
     5041 ggcagcaggt ttgccgttat agcgcgccac ggtggaataa tcttccgctc caagttcgac
     5101 gcgggcgaca tcacgcagca gcacttgcga accatcttgc tgaactttca acaggatttt
     5161 gccaaattct tccggcgttt gcagacgcgt ctgcacaatg atcgaggcgt ttagttgctg
     5221 gtctgccgcc tgtggcatgc cacccagttg accaccggaa atctggttgt tttgcacctt
     5281 aatctgggaa ataacatcgg aaggtaccag attgtattta ttgagttttt gcgggtccag
     5341 ccagatacgc atggcgtact cggaaccaaa gagctgtacg ctaccaacgc ccgcggtacg
     5401 gcttagcggg tctttgatat tagacgctac atagtccgcg atatcgtact ggttgaggct
     5461 gccgttatca gaaataaacg ccgctaccat cagaatatta ctgctcgact tatcaacgct
     5521 aatcccctgc tgctgcaccg cttcaggtaa tgaaggcata gcgagttgca gtttattttg
     5581 cacctgaacc tgtgcgatat caggagatgt cccagtctcg aaggtcagag tgatagaggc
     5641 attacccgcc gcatcactgg ttgaagacat gtacatcagg ccatcaagcc cattcatatt
     5701 ttgctcaatc acctgagtga ccgagtcttc taccgtttgc gcatcggcac ctggataggt
     5761 agcgctgacg gtaatggtcg gtggcgcaat ctgcggatac tgcgcaaccg gtaagttcat
     5821 gatcgccaga ccacctgcaa gcatcataat aatggcaagt acccaggcaa aaaccgggcg
     5881 atcaataaaa tagttagcca tgaaagtccc cttaagcctg caacgttatt gtttcgattc
     5941 ggtgctggcg ttttcctggc tggaggaaat tgctcgtgct ttgatacccg gacgaatgcg
     6001 ttgcaaaccg gaaacgatca cccgatcgcc agcctgcaag ccagaggtga caacccactg
     6061 gtcgccgatg gctttgctgg cttcaatttc gcgtagctgc acaacatcgt ctttatccag
     6121 aatgagcgcc gttgctttac cctgggcgtt gtgggtgacg ccttcctgcg gcaccagtaa
     6181 tacattctgg cggctacctt catccactaa tgccgtgacg tacatgccag gcagcaagtc
     6241 accatttggg ttggggaaaa tcgcccgtaa cgtcacggag cccgtggttt catccaccgt
     6301 cgggtcggag aatttcagtg tgccggtctg gctgtagcgt ttaccatttt ccagattgag
     6361 ctgtactggc gtactgccct gaacctgttt gatttgccca ctggcgacct cttctttcat
     6421 gcgcaagaaa tcctgcaccg actgcgtgag atcgacataa atcgggtcca gacgttgtac
     6481 ggtaaccagc gaatctgcct gattagcggt aacgagtgcg ccgacggtca ccgacgattt
     6541 cccgctgacg cccgtaatcg gcgaggtgac attcgcgtat tgcagattga tcgtcgcctg
     6601 ttcaacagcc gctttggcga cggtgacatt ggcttctgct tcattcagct gggtgcgcgc
     6661 ggtgtcgtaa tcctgacggc taacgtagtt ggtcttcagc aacgatgcct ggcggttaaa
     6721 ggtgatgcgg gcattgctgg cggtagagag cgctttcgcc agcgagcctt tggcggagtt
     6781 tagctcggcc tgtaaaggtg caggatcaat ctgatacagc gaatcgccct ggttcacttt
     6841 atcgccttcg ataaagttgc gtttaatgat aataccgccc acctggggac gtatctcggc
     6901 aacttcataa ggaacggttc taccgggcaa ttcgctcaac acattgaccg aaccggggga
     6961 gagtgtgacg acaccgacct caggcgtcat ggcggcggcg ttttccgccg atttgtcatc
     7021 gcaggcggtg agcatcgcgc cgcagaataa caacggtatt aacagctttc ttcttctgtt
     7081 cattttagtc cctgaaaatt cttgagaaat aacggttctt taaattgcgc gcgaggagag
     7141 atatgaggga tttacagacc agcggcatag tggggttgtc agccagtaag gtgggataca
     7201 ggcacagtga tcgacatggt gaggtcaacg acaaaaaaaa tgttgccgtt ctgccaacag
     7261 ttcctgccag cattcgggca acgaagggtt ctactggtgg atacacatac caggggaata
     7321 aagtcgtttt agcctctcct ttagtaatca ccgggggtaa tgaaatcagc atctgcatcc
     7381 ctcgtcatgc cagccatcaa tttcagttgc ttatgtcctg actaaaaata agatgtgata
     7441 cccagggtga cgatgtcgct catacgtctt agtttcaact tgtacataat gttgaatttc
     7501 tgaatcttta atgtttgttg cgaaatattg agcgtcaacg tgatattgct ttcattttta
     7561 tttttcagaa tcagttgcat aattttgaac tgattatgtg aaaaacataa ttgtgaattc
     7621 ttatggggca agtgtttacc ataagtaatc tcaagaagat ttttgatact ttctttgcgg
     7681 ctaacaaaat aaataggcgc tttagctttt agtttactga tgtgataagg tgccaaaaca
     7741 ataattctct cggcatctaa tttctccaga aatttaatcg cttcttcatc aaggatatga
     7801 ttgtgatagg tatcaatgat aaccttgaag ggtttattgc ctactttttt gatctctgac
     7861 agggaattga tttttatcat ttcgtgatta tctttcaact gccaaaagcc ctgtaaaaga
     7921 aaagaatctt tcgtcatgag aaaaatcata acttgctcct tagccgttat cgtttcgaac
     7981 atgtcatcct tttcattatt tacatccttg tccgaatcgt tgttcaatat agtaaacgcc
     8041 tataagaact ttacccttcg tgaactaata cgtctattaa cactaatcaa tacttcagat
     8101 ttatccatca cgcactccat atattgatcc taagtaagat tcctggttgt tatcagcttg
     8161 taaatagtaa acaaaaagtt aacgtttgcg gattactgcc caagaataag ttatcaataa
     8221 ccagtttgtg atctctgaag aatattacta aagttaaaat gtaatccgat ttaaatatcg
     8281 agtctccttg tttcgactta agctggcaat tggattgcca gctttctttt aacgcattga
     8341 aattacctga gtaaataacg cattcatgtc ttcaggtttt tatatagcgt ctggagacac
     8401 ggatatttat gcaatgtaat caacgccagt tgcaaaaaaa tgaacccgga ttacttattt
     8461 aaccgcccat agcatcaacg cttacggaac tctttgttca ctttcccaca gcacttttaa
     8521 aacattaaac ctgactacgg aaaatatcag ccatgataat gtttgaaatg gctaatttgc
     8581 catggagtga aaaaaattag atgaaattca gtaggttgaa ataatcacta gcaggtaatt
     8641 atttcaatga tagtgcgcaa ttgatctaca acactgcgta gcggagagag tattaatcgg
     8701 atcatagtca catcaagtga ctatgatccg ggtgacaacc ggggtaatta ttgctgctta
     8761 acgaacaaac tggcgaagct gaacaggctg gcggcgctaa atatcagttc aattcccacc
     8821 agtgtggaaa ccagcgttac agacaccatc ggcgttgcac caaggaatat ccaggcaatg
     8881 acgatatcca gcacaccaat aacgagctgt agccagctgc ctttcattga acgctgacga
     8941 taccaactca tcaggcgaat aacccctgca acacagaaca aaccggcaat aaatgccgca
     9001 atggcaaaaa tgcccagctc cggtgcgcgg atgaagaaat agccgatcaa taaataggcg
     9061 actgcgacga ggaaaccgga taataccggc cagaaattat gactgcggtt gctgaataac
     9121 ccgacaataa gcgcaatacc cgagcagatt aataatgcac ccactactgt gcttaaaata
     9181 tcgccagaga cgaacgggaa actgatacac agcaacccga cgataaacag cagcacggca
     9241 ataaactgga ttgctctgcg atgtttttta agcatctcca gatcaaactt caaaattgtt
     9301 gccttatcta tatataacat agaaccaccc tataaaatta agaagaaaat cccctgctat
     9361 caatctatgc caaaaacgcg tctaagaatg cagtcgattt aataaaaatt tcctaattgc
     9421 agtatctgat gcatctgtaa ctcattgtat tgaaataaaa atatctgatt ttgatatttt
     9481 ccatcaacat gacatataca gaaaaccagg ttataacctc agtgtcgaaa ttgatttgtg
     9541 acggctcttt cactttatag ttgaggatat tacgatgaaa aaagtattag gcgttattct
     9601 tggtggtctg cttcttctgc cagttgtgag caatgcagcg gatgcgcaaa aagcagctga
     9661 taacaaaaaa ccggtcaact cctggacctg tgaagatttc ctggctgtgg acgaatcctt
     9721 ccagccaact gcagttggtt ttgctgaagc gctgaacaac aaagataaac cagaagatgc
     9781 ggttttagat gttcagggta ttgcaaccgt aaccccagct atcgttcagg cttgtactca
     9841 ggataaacaa gccaacttta aagataaagt taaaggcgaa tgggacaaaa ttaagaaaga
     9901 tatgtaattc cgggaatgcg ttacatcgta cttccttgca tattgaacag gccggaatat
     9961 cttctttaaa agcagctatt cctcctgttc atatataatc tatatattga atgggttaca
    10021 aaatgaatat ttcatctctc cgtaaagcgt ttatttttat gggcgctgta gcggctttgt
    10081 cactggtgaa cgcacaatct gcgctggcag ccaatgaatc cgctaaagat atgacctgcc
    10141 aggaatttat tgatctgaat ccaaaagcaa tgaccccggt tgcatggtgg atgctgcatg
    10201 aagaaacagt atataaaggt ggcgataccg ttactttaaa tgaaaccgat ctcactcaaa
    10261 ttcctaaagt gatcgaatac tgtaagaaaa acccgcagaa aaatttgtat accttcaaaa
    10321 atcaagcatc taatgacttg ccgaattaat gaggtacaag taaaaaggag tagcaagttg
    10381 agccatcttg ctgctccttt ttgcattttt atatgacagc agaatttatt atacgtctta
    10441 tactcgcggc aattgcctgt ggcgctattg gcatggaaag gcaaatgtga ggcaaaggag
    10501 cagggttacg cacacatgta ttaattggca tgggaagcgc cctgtttatg attgtttcga
    10561 aatatggttt tgctgacgtg ctgtctttag atcacgtcgg actcgacccc agccgtattg
    10621 ctgctcaggt ggtgacgggc gtcgggttta tcggtgcagg taacattctc gttcgtaacc
    10681 aaaatattgt aggtttgacg acggcagcgg atatctggat gaccgccgct ataggtatgg
    10741 ttattggcag tggtatgtac gaattgggta tgtatggttc agtgatgacc ttgctggtgc
    10801 tggaagtctt ccatcaatta accttccgcc tgatgaacaa aaattaccat ttacagctga
    10861 cattagtgaa cggtaatacg gtatcaatgc tcgactggtt taagcagcaa aaaataaaaa
    10921 cggatttagt ttcgttgcag gaaaatgaag atcatgaagt ggtcgccatt gatatccagc
    10981 ttcatgccac aacgtcgata gaagatctgt tgcgattatt aaaaggtatg gcaggggtga
    11041 aaggcgtttc aattagctaa tctgtgtggc agcgtagtca gactcaccgt aagcctgaaa
    11101 ttcacaccag ataatcaata tgctgatggc gtaccagctc attgatccgc ttaagattga
    11161 ggatcatcat gatattgtgt ttatggcagt agaacgtttt tagcgttatt ttcagtttct
    11221 ccagaatatc ctccgttgtc atttgattcg caatgcagct cagaacctga tgttgcttgc
    11281 gcgaaagtga cacagccgct tcaggcacag agcagtaact gccattgatg agtgcgacaa
    11341 aatcgatgat agtgatagtc cgcggaacaa aggtcaccgg cactttcccc aggcagcgtt
    11401 taatattaaa gggggagaaa ataatcacat ggacaggttt taatcgttca atttgagtga
    11461 gaaaattaga atgaaataca ttattcatta atgtatcaat aatgacaaag gcattctgat
    11521 gcaacattcc gtcgatctct tcttcgttct gtatatgaac gacattacct ttgctcaaaa
    11581 tgtttttcat cgcggtgaag aacatcgtat ccctggtaat tataagaaac ataaccgact
    11641 cctggtgcgg acattaattt tataatcagt ttgccaaagg taattaacag gacagggctt
    11701 ataataataa tagttagctt gctgtgtatt aattttatgt aatgcacgat gcagatgctg
    11761 agaaagcatc tgcatctttc ggtggtgtta tttgaccagc tcaggtgtta cctgactcac
    11821 cgcattggtg tagtaaggcg caccccagcc cggttccggc cagaatgcac catagccgta
    11881 atcccatagg ttataggtgg tattaaccac ttctctcaaa tgccacacct ggatgccctg
    11941 catattcact tccaggaagt tatacgggac tttattgata aagccaggtt gttcaccctg
    12001 aatggtaccg aggatggtaa caaagtgatt acgatagttc actgggtcaa ggaagccgct
    12061 ttgtctggcg agcagtcggc cctgatagtt ggcttcaata tcaggtttcg catagctatc
    12121 caacggtaat acagcgattt ctaacaacgt atccgttttg ccattgataa cgttgataac
    12181 cttcccacca aagcgcgctt gttgaccaac atataacccc ggctggttat gaacagcaac
    12241 aaaacttttt tgaatatcag gttggttatt gcctttgata ttttgcggaa ttgaactaca
    12301 tgcggcaagc aaaaatgaaa ggctgaggat gagtgcacct tttgtcatgt tcatgttact
    12361 atccttatca acaaatatta aaaccataat agatatttct ttatagtttt catctgattc
    12421 tgaggcgata tgcctgatag taacgtaaac ctgtctgatg tttatatccc ttttgtttag
    12481 ttcaattcca ttgattttgg ggcgtggcat aagtatccat cgccccataa tataatcctt
    12541 tgttttaaaa ttacataaaa tctattttta ttcaataatt ataaagtgct aataatcaat
    12601 attatggtat tatattctga taatgatttg ataagcgaat tcttttgcca gatggtattt
    12661 ctatttccac cccataattt atatcttttt cattaggaag tggcctcttt aaataaggcg
    12721 tgtgtgacat tttttttggg ttaagcgtct cgaattgaaa tacttcgaac tgatattcag
    12781 acatttctgc ccatgtttga attttattgt atcgagagag tgtcgtagag gctttaactt
    12841 gcttataaca ttgtttttgg aattcttgct gatattttaa tatgtcattg tatgaaagat
    12901 tggttatcct ggcctctaaa aatttaatta ttgtcgaagc aatttccgct tttgctcgta
    12961 aaaagttgtc attaatggtt aataatgttg aaaataaacc ttcgatttgt ttgtcaagat
    13021 attgtccatc tttatataat ttgggggggt agggtgttct ttatgtaaaa aatagtgtca
    13081 cctaaatttg cgtcagtgaa atttatatta agtagatctt cgaaataaaa ccttgacaag
    13141 gttagagcga acccggaaag gttctgtcct gtcatattga aatcaataaa gttggttccg
    13201 gcaaagactt tcatcctgtt tttattttca ctgtgctcaa tatataactt cgtcattttt
    13261 tgatacaggc tttgaatatc ttttatatta gttggtaagt cagctcgttg ttcagcaata
    13321 aaattagtat ctgaaaatat ggtttggaca ctgaatgtta tgggtattcc ctcttctacg
    13381 ctaattttag ttatgattgc cttgtcgggt ttaggattag cgacaacaat gattcgacat
    13441 tcagcacttt tgtttttttc atatctaatg ttattaatct gattaagtat tgattgtgtc
    13501 tgttgcgtaa gtggtgtcga acttatcgtt tcaatgttat taataagact tacaagttga
    13561 accacaactt ttgagtagtc tgcatttgta tatgtggtgt tcgtgtggca tgcattaatt
    13621 tgttggagtt gttgttgcgc taaatcaaat tgttcagggt tgtatccttc tccagagaat
    13681 gtggaattaa tgggttgttg ttcttcccaa ttatcacaag gccacttcgg tgtgtctggc
    13741 gttttaacat tatcggtatt tgttgtgcag ttataaatat tgccgtgata tgtatttatt
    13801 atacctgggg taaagtcaat tgacataaca ttccttattc atcatctgtt ttatgctaag
    13861 gtttttaaat tggataatta gaacaggaat ggattttctt ctacacacaa taaatataat
    13921 gcgttatatc ttcctgatat aattaccttt aaattccctt tcatttccac ccggtaatat
    13981 ttgtgtataa aaaaagcagt gatagtatcg taaaggaaaa cgttaacaac tatcaaaaag
    14041 cgctcatttt aaaaagttat tatgttctcc gatagtgtgt gaagtaatat ttttgtgatg
    14101 ttttagatgt gtaataatga accaggttaa agtgtattta aaaatgtgtt gtattagcga
    14161 ctgaaatctg ccttttaaaa aggaggaggg tactgagaca aagagtcatt gcttctccga
    14221 ta
//
LOCUS       DADMIB010000107        14165 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.107, whole genome shotgun sequence.
ACCESSION   DADMIB010000107 DADMIB010000000
VERSION     DADMIB010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14165
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.107"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1986
                     /gene="yicI"
                     /locus_tag="JNZ89_002937"
     CDS             <1..1986
                     /gene="yicI"
                     /locus_tag="JNZ89_002937"
                     /EC_number="3.2.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HAY8936743.1"
                     /translation="FKSGNLSARVSKGEFWSLDFLRNGERITGQDTNNQRNYMFERLD
                     LGVGETVYGLGERFTALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHP
                     QSVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGL
                     WLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPE
                     GMIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIY
                     DFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAHIYN
                     ELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLS
                     GFGFWSHYIGGFENTAPAHVYKCWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRF
                     FTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPV
                     FTEAGDVQFYLPEGRWTHLWHNDELDGRCWHKQQHSFLSLPIYVRDNTLLALGNNDQR
                     PDYAWHEGTAFHLFNLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWT
                     LCLRNVVKVNGLQDGSQAESEQGLVVKPQGNALTITL"
     gene            complement(2039..3748)
                     /locus_tag="JNZ89_002938"
     CDS             complement(2039..3748)
                     /locus_tag="JNZ89_002938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HAY8936744.1"
                     /translation="MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSD
                     YHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTIL
                     LENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVL
                     GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADG
                     SWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDAHLQGPDWAVTDLDLS
                     LRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGG
                     MVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRN
                     LIIDIDPDFPWQLTTLDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLA
                     LTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPEL
                     PLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSAE
                     LVQ"
     gene            complement(3869..5260)
                     /gene="xanP"
                     /locus_tag="JNZ89_002939"
     CDS             complement(3869..5260)
                     /gene="xanP"
                     /locus_tag="JNZ89_002939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanP"
                     /protein_id="HAY8936745.1"
                     /translation="MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
                     AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKTWGPVGSGLLSIQG
                     TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPL
                     VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNP
                     YLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLML
                     VFMITSLETIGDITSTSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
                     GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIA
                     ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGIT
                     AIVLNLIFPPEKQ"
     gene            5540..6745
                     /gene="gltS"
                     /locus_tag="JNZ89_002940"
     CDS             5540..6745
                     /gene="gltS"
                     /locus_tag="JNZ89_002940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HAY8936746.1"
                     /translation="MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLL
                     VALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVV
                     GLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV
                     AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLI
                     ETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSIMGFYRVFERAVS
                     VLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
                     AAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKL
                     YLMLPIFAG"
     gene            complement(6785..8866)
                     /gene="recG"
                     /locus_tag="JNZ89_002941"
     CDS             complement(6785..8866)
                     /gene="recG"
                     /locus_tag="JNZ89_002941"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HAY8936747.1"
                     /translation="MTGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRY
                     EDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAA
                     MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQ
                     ATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQH
                     PAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARV
                     VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHA
                     NNFRNWFEPLGIEVGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
                     LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
                     LPPGRTPVTTVAIPDTRRTDIIDRVRHACITEGRQAYWVCTLIEESELLEAQAAEATW
                     EELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMI
                     IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQ
                     KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIER
                     WMPETERYSNA"
     gene            complement(8872..9561)
                     /gene="trmH"
                     /locus_tag="JNZ89_002942"
     CDS             complement(8872..9561)
                     /gene="trmH"
                     /locus_tag="JNZ89_002942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(18)-2'-O)-methyltransferase
                     TrmH"
                     /protein_id="HAY8936748.1"
                     /translation="MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
                     VHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA
                     VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE
                     AQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD
                     ADWWATMQAAG"
     gene            complement(9568..11676)
                     /gene="spoT"
                     /locus_tag="JNZ89_002943"
     CDS             complement(9568..11676)
                     /gene="spoT"
                     /locus_tag="JNZ89_002943"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HAY8936749.1"
                     /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
                     YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
                     LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
                     ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
                     EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRV
                     LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
                     VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
                     PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
                     ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENI
                     QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGV
                     LITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQE
                     FITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLA
                     NIMRKIRVMPDVIKVTRNRN"
     gene            complement(11695..11970)
                     /gene="rpoZ"
                     /locus_tag="JNZ89_002944"
     CDS             complement(11695..11970)
                     /gene="rpoZ"
                     /locus_tag="JNZ89_002944"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013511051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HAY8936750.1"
                     /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
                     KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
     gene            complement(12025..12648)
                     /gene="gmk"
                     /locus_tag="JNZ89_002945"
     CDS             complement(12025..12648)
                     /gene="gmk"
                     /locus_tag="JNZ89_002945"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HAY8936751.1"
                     /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP
                     RPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD
                     IDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
                     DEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD"
     gene            12906..>14165
                     /gene="ligB"
                     /locus_tag="JNZ89_002946"
     CDS             12906..>14165
                     /gene="ligB"
                     /locus_tag="JNZ89_002946"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418104.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigB"
                     /protein_id="HAY8936752.1"
                     /translation="MKVWMAILISILCWQSSVWAVCPAWSPARAQEEIFRQQQQIKQW
                     DDDYWKEGKSEVEDGVYDQLSARLTQWQRCFVSEPRDEMMPPLNGAVMHPVAHTGVRK
                     MADKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSL
                     ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSL
                     GVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVT
                     DGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA
                     SVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP
                     PENRFNSLTCYFASDVCQEQFISRLVSL"
BASE COUNT         3172 a         3671 c         3902 g         3420 t
ORIGIN      
        1 tttaaaagtg gcaacttaag cgcgcgtgtc agcaaaggtg agttctggtc actcgatttt
       61 ctgcgcaacg gtgaacgtat taccggtcag gacacgaata atcaacgaaa ttatatgttt
      121 gagcggcttg atcttggcgt tggcgaaaca gtttatggtc tgggagagcg ttttactgcc
      181 ctggtgcgca atggtcagac ggtagagacc tggaaccggg acggcggcac aagtactgaa
      241 caggcgtata aaaatatccc gttctatatg actaaccgtg gctatggggt gctggtcaat
      301 cacccccaga gtgtctcttt tgaagtggga tcggagaaag tctccaaagt gcagttcagc
      361 gttgagagcg aatatctcga atactttgtt atcgacggtc cgacgccgaa agcggtactt
      421 gatcgttata cccgttttac tggtcgtccg gcgctgccgc ccgcatggtc cttcggcctg
      481 tggctaacca cttcatttac caccaactac gacgaagcga cggtaaacag ctttatcgat
      541 ggtatggcgg aacgcaatct gccgctgcat gttttccact ttgactgttt ctggatgaaa
      601 gccttccagt ggtgcgattt tgagtgggac ccgctgactt tcccggaccc ggaagggatg
      661 atccgccgcc tgaaagcgaa agggctgaaa atctgcgtct ggattaaccc ctatatcggt
      721 caaaaatccc ccgtctttaa agagttacaa gagaaaggct atttactcaa acgcccggac
      781 ggttcgctat ggcagtggga taaatggcag ccaggtctgg cgatttatga ctttaccaat
      841 ccggatgcct gcaaatggta cgccgacaaa ctgaaaggtc tggtcgcgat gggcgttgat
      901 tgctttaaga ccgactttgg cgaacgtatc ccaactgatg ttcagtggtt tgacggttcc
      961 gatccgcaga aaatgcataa ccattatgcg cacatctaca acgaactggt gtggaacgtg
     1021 ctcaaggaca ccgttggtga ggaagaagct gtcttgtttg cccgctcggc ctccgtcggt
     1081 gcgcagaaat tcccggtaca ctggggtggc gattgttacg ctaactacga atcaatggcg
     1141 gaaagcctgc gcggtggttt gtctattggc ctttcaggtt ttggcttctg gagccactat
     1201 atcggcggct ttgaaaatac cgctccggcg cacgtttaca aatgctggtg cgcgtttggt
     1261 ttgctctcca gccatagccg tttacacggt agcaaatctt atcgtgtgcc gtgggcctac
     1321 gatgatgagt cctgtgatgt ggtgcgcttc ttcacgcaac tgaaatgccg catgatgccg
     1381 tatctgtatc gtgaagctgc gcgtgcaaac gcgcggggta cgccgatgat gcgggccatg
     1441 atgatggagt tcccggacga tccggcttgt gattaccttg accgtcaata catgttaggc
     1501 gacaacgtga tggttgcgcc ggtgttcact gaagcgggcg atgtgcagtt ctacctgccg
     1561 gaaggtcgct ggacacacct gtggcacaac gatgagctcg acggtcgttg ctggcataaa
     1621 cagcagcaca gcttcctgag tctgcccatt tatgtgcgtg ataacaccct actggcgctg
     1681 ggcaacaacg atcaacgtcc cgattacgcg tggcacgaag gcacggcatt ccacctcttt
     1741 aatctgcaag acgggcatga agccgtctgt gaagtgcccg ctgctgacgg atcggtgatc
     1801 tttactttaa aagcagcacg tactggcaac acgattactg tgactggtgc gggcgaggcg
     1861 aagaactgga cactgtgcct gcgcaatgtt gtgaaagtaa atggtctgca agacggttcg
     1921 caggctgaaa gtgagcaggg gctggtggtg aagcctcaag ggaatgcgct gacaattacg
     1981 ttgtaatcta ttgatggaat gccgggtacg tctgagtcgt acccggcgag attgatgttt
     2041 actgcaccag ctctgccgac gtaacttcac cgctggaaac gatgccagca ttcatggttt
     2101 gagtcacttg ctgctttgcg gcgttcacgg catgcaattg cccgctaacc gtaggtttca
     2161 gcggggcatt ggcctgaata tctccactgg cggtaagctg aatattgccg tcgccagtca
     2221 acggtaattc aggccatccc cattgttgca aaatattcac cggcacaccg cgtccattca
     2281 ggctgatatg ggtctgacgt tgtggcgttt gtgaaacact ggcagtggct tccagaatgc
     2341 ctttttcagt aaatgcactc agttcgctga tattcaccgt gctgctgttg gcggtcagcg
     2401 ccagcgacgg gcgacgaaca tcaacacgat tgaatgtcgc ggcggcggca ttcagattcg
     2461 ccgagccact ccagacgccc catttatgat cggtaaccag cgtcaggttg gcaccgtaac
     2521 catcgagcgt ggtgagctgc cacgggaagt cagggtcgat atcaatgatc agattgcggc
     2581 tggcgctaaa tctcttcagt tgcaggctgt ttaaccaacc gggtgtcgtt tccatccaca
     2641 actgttgcca gtttttcggc aaggtatatt ccagcccggc aattgccgca tcatcaagga
     2701 tcaacgtttt cccgtcacgc agccagttcc ctgacgttct gaccataccc ccttcccagc
     2761 ggctggtgaa ctggcgcagc gctacgccct gcggggaaaa ttccgcgttt ataatcgggt
     2821 caaataaatg cagcgaacca taaatgaact cgctagcgtt catcgacagt ttgccttctt
     2881 gtgtctgcca gtcatcttta ctgaaggtca tgttgcgcaa gctgagatcg aggtcggtca
     2941 ccgcccagtc cggaccttgc aaatgagcat cgatcacttc caggcgacca atctgcaacg
     3001 acgggacaga gcgtaatggc gcaaagaagt cggttagcga tttttcgctt tgtagacgta
     3061 tatccgccat gcgcaggttt tccacttgcc agctgccgtc ggcgttacgc tgcgcgtttc
     3121 cggttaatgt cccgcgggcg atgtcggcac ccaggttagt cagcgtaacg cgatcgttat
     3181 caatactgcc ttcaatcagt acattggtgg caggaacatc attgagcgaa agcgatccgg
     3241 cactaaactg aatctgcgcc ttcgtaccca gcactttacc ggcttttggt gaccacggaa
     3301 ctacgccgcc atttacccgc tgcgcgctca gtttccattc gctattcggg ctattaaacg
     3361 ccatatcacg cagttgcaga cgatcggctt tgaacggtag cggcgcggtc tggtcggtga
     3421 gattcagcgt cccgttttcc agcaggatgg tatcgacatg gcgtggttcg gtcagttgcc
     3481 gactgcttag cgcaatgtcg acacttttgg ccaccagggt cgcgggctga ccatcacgac
     3541 caaacgtgac attctccagc acgatatgag atggcgcgga aaaacggtga tccatcgccc
     3601 cgaaggccag atgatagtcg ctattctcgg aaacccatgc gctgatatgt tctgctcccc
     3661 agcgggtttg cagaagaaaa tagaggccag cgatcaccac taacagagcg atgagaatgt
     3721 agagaagcag cttcccaata aatttcatgg tcttccattc cgtgaaatgc acataagaga
     3781 gttatgcacg atttacgcgc aatcctcaag gcgggaatgg tgaaagaggt gagactgcgg
     3841 cggtaattat cttaccgccg ccagtgaatt actgtttttc tggtgggaaa atcagattca
     3901 gcacgatggc agtaataccg cccgcggcga tcccggagga gagcaggttt ttcagccatt
     3961 caggggcaaa ctgcaaaatc agcggctgct gagacacgcc cagaccaacc gccagcgaca
     4021 gcgcgataat cagaatcgcc cgacggttca gcggctcacg agaaacgata cgcacaccgg
     4081 aggcggcgat ggtgccaaac attacaagcg ttgcgccgcc cagaaccggt tctggaatgt
     4141 gttgtacaaa accgctcact gccgggaaca gacccagcac gatcaacatc agcgcgacga
     4201 caaaaccgac atagcggctg gcaacaccag tcaactggat cactccgttg ttttgcccga
     4261 agcaggagtt cgggaaggtg ttaaacaccg ccgaaacaaa cgagttcagg ccgtttgcca
     4321 gcacgccgcc tttcaggcgt ttcatgtaca gcggaccgga cactggctgt tcggaaacgt
     4381 cagaggtcga cgtgatatcg ccaatggttt ccagcgaagt gatcataaag accagcatca
     4441 gcggcagcag cagactccat tcaatgccaa gaccgtaata gagcggcgtt ggcaccataa
     4501 tcagttcttg cgtcatcggt tcgttgcttt ctggcaacat gcccataaac cacgccagcg
     4561 catatccggc cgccatcgca atcaccagtg aggccacgcg taagtaaggg ttacgttgac
     4621 ggttaagcag gataattaag gctaagacca cgcctgccag cagcagattt ttcggtgcgc
     4681 cgaaggtgtt atcgctcatg gctgcgtaac cgccgccaat ggacgttaac ccaacctgaa
     4741 ttagcgacag gccgataatc atcaccacaa cgccagaaac cagcggcgta ataatgcggc
     4801 gcgccagatg cagaacgcgg gagatcacca tctcggtgca acttgccagc atcaacgtgc
     4861 cgaacaaagc cgccatcatg gtaggaacat cagcaccacc ggttttcagc gcggtaccgc
     4921 ccataatcag cggggcaaca aagttgaagc tggtgccctg aatagacaac agcccggagc
     4981 caaccggacc ccaggtctta atttgaataa tcgatgccac accggaggca aacagcgaca
     5041 tactaataat gtgttgcgtg tcttgtgccg gtaaacccag cgcctggcag attaatagcg
     5101 ctggcgtgat caccgcaacg aacatcgcca gcagatgctg acaggcggca aacagggttt
     5161 gaggaagcgg cggacgatct tcaagacggt aaatcagttc gctgttttga gtctgcgcaa
     5221 ccggttgcgc attttctgac tcgagggtgg aaacagacat cgaaaacaat cccgtggtag
     5281 caaagcgggc attttagctg accgaaagag aaaagcaaac gtttgccaca tcctcatcaa
     5341 aatatttaaa tgagataaat gcactttttt atataacttt tggtattttt ctgcttaaaa
     5401 tccatgccat ttgttcatta acagctgaga atttgaccca ggaaagcata actcgatacc
     5461 cgtcatagtt catgaagttg ccactgcgcg atgaagtatg acgagtatga aagagtgatg
     5521 cggatacaaa ggagtaacta tgtttcatct cgatacttta gcaacgcttg ttgccgcaac
     5581 gctgacgttg ctgctcgggc gtaagttggt ccattccgtc tcctttttga agaaatacac
     5641 cataccggaa cctgttgcgg gtggtttgtt ggtggcgctg gcgctactag tactgaaaaa
     5701 aagcatgggc tgggaagtca actttgatat gtccctgcgc gatccgttaa tgctggcttt
     5761 cttcgccacc attggcctga acgccaacat tgccagtttg cgtgccggtg ggcgtgtggt
     5821 tggcatcttc ttgattgtgg ttgttggtct gttggtgatg caaaatgcca ttggcattgg
     5881 tatggctagc ctgttagggc ttgatccgct gatggggctg ttggccggtt ctattacgct
     5941 ttccggcggt cacggtacgg gcgctgcgtg gagtaaattg ttcattgaac gttatggctt
     6001 caccaatgcg acggaagtgg cgatggcctg tgcaacgttc ggtctggtgc tgggcggctt
     6061 gattggcggt ccggtggcgc gctatctggt gaaacactcc accacgccga acggtattcc
     6121 ggatgaccag gaagtcccga cggcgtttga aaagccggat gtgggacgca tgatcacctc
     6181 gttggtgctg attgaaacta tcgcgctgat tgctatctgc ctgacggtgg ggaaaattgt
     6241 tgcgcaactt ttggctggca ctgcttttga actgccgacc ttcgtctgtg tactgtttgt
     6301 tggcgtgatt ctgagcaacg gtctgtcaat aatgggcttt taccgcgtct ttgagcgtgc
     6361 ggtatccgtg ctgggtaacg taagcttgtc gttgttcctg gcgatggcgt tgatggggct
     6421 gaaactgtgg gagctggctt cgctggcgct gccgatgctg gcgattctgg tggtacagac
     6481 catcttcatg gcgttgtatg ccatcttcgt tacttggcgc atgatgggca aaaactacga
     6541 tgcggcagtg ctggctgcgg gtcactgtgg ttttggcctc ggtgcaacgc caacggcaat
     6601 cgccaacatg caggcgatca ctgaacgctt tggcccgtcg cacatggcgt ttttggtggt
     6661 gccgatggtc ggtgcgttct ttatcgatat cgtcaatgcg ctggtaatta agttgtattt
     6721 gatgttgccg atttttgccg gttaaccgat gaagcggaag cggcggtctt ctcaccgccg
     6781 ccttttacgc attcgagtaa cgttctgtct ccggcatcca gcgttctatc aaggcttttg
     6841 cctgttgtgg gtaacgttcg tgaatatgtc gcgccaggcg ctgaacttcc gggatcatcg
     6901 cctgatcgcg cagtaaatcc gccactttaa attcagcatt acccgtctga cgcgtgccta
     6961 acaattcgcc agggccgcga atctccagat ctttttgcgc aatcacaaaa ccgtcgttac
     7021 tgtcgcgcag cacttgcagg cgaatttgcg ccgttttaga aagcggcgtt ttgtagagca
     7081 gcacgcagtg agaagccacc gcgccacgac ctacgcgccc gcgcagctgg tgtaactgcg
     7141 ccagacccag acgctcaggg ttttcgataa tcatcaggct ggcgttaggc acatcaacac
     7201 cgacttcaat aacggtagtg gcaaccagca gatgtagctc accttgttta aacgacgcca
     7261 tcaccgcctg tttctcggct ggtttcatcc gcccgtgtac caggccaaca ttcaattctg
     7321 gtagcgccag tttcaactct tcccaggtag cttccgccgc ctgcgcttcc agtaactctg
     7381 actcttcaat caacgtacaa acccagtacg cctgacgacc ttcagttatg caggcatggc
     7441 gcacgcggtc aatgatgtcg gtacggcggg tatcaggaat agcgaccgta gtcactggcg
     7501 tgcggcctgg cggcagctca tctatcaccg aggtatcgag atcggcatac gccgtcattg
     7561 ccagcgtgcg ggggatcggc gtggcggtca tgatcaactg atgcggatgg aagccttgct
     7621 gctggccttt ctcccataac gccagacgct gatgcacgcc aaagcgatgt tgttcgtcga
     7681 taatcaccag cgccagaccg ttaaactgca cctgttcctg gaagatggcg tgcgtaccaa
     7741 caatcatctg cacctgaccg ctggcgatgg cttcctgctg agacagtcgc gctttgcctt
     7801 tctgcttacc ggcgagccag cccacttcga taccgagcgg ttcaaaccag ttgcggaagt
     7861 tattggcgtg ctgttcggcg agtaattcgg ttggtgccat caatgccacc tgtttgccgt
     7921 gggcaatcgc acgcagcgcg gcgagggcgg cgaccagcgt tttaccggaa cctacatcgc
     7981 cctgtaccag gcgcatcatc ggcacatcca gcgccatatc gcgctcgatc tccgccacta
     8041 cgcgtgcctg tgcgcccgtt ggcttgaacg gtaaggctgc gaggagttta tttttcagcg
     8101 catcattggc gctcagcggc tgggcatgaa aacgctgtgc tccggcacgt aaggctaaca
     8161 tgctgaggtt gtgcgccagc agttcttcca gaatcagacg acgttgcgcc ggatgctgcc
     8221 cggtttccag atcgctaagc tgtagcgtcg gtggcgggcg gtgcaaagtg cgcaacgctt
     8281 ccggtagcgt catcattcct tgtgacagtt ccggcggcag gagttcttca atggcgcagg
     8341 tgtcgagcag atccagcgcc tggtcggtta atttacgcag cgtggcctgc tttacgcctt
     8401 ccgttgttgg ataaaccggc gtgagcgttt cctgtaattc tggcgtgctg agatcgccct
     8461 gcacgcggta ttccgggtgg atcatctccg caccatattt accgcgcttt gcttcgccat
     8521 aagccagtac acggcggccc gtcgccaggc tatttttcat tgccgcgctg aaattgaaaa
     8581 agcgcatggt gaggatgccg gaaccgtcgc tgatctggca ggtcatcatc cgccgaccgc
     8641 cgaaggagat attgcagttc agcacttcgc cttccaccgt ggcataaacg cccggcagta
     8701 gttctccgat ggggtagaga tgggtgcgat cttcgtagcg caggggaagg tgtaagagta
     8761 gatcctgcac ggtatgcagg ttgattttcg ccagtttgtt actaagtgct gcgccaacgc
     8821 ccgttaggga actgagtggg acagcatcta acaggcgacc tgtcatggca cttaccctgc
     8881 agcctgcata gtagcccacc agtcggcatc agcttcgatc tcgccttgct gattgacgtg
     8941 gggataaggc aggcctttgc gttttgcgac tttcgccagc accggatagc cgccttcaaa
     9001 caacaggcgt tgttgctctg cttccggcaa catgctgttt tcacgcaggt acatgcctgc
     9061 attttgccgc tgacgctggg cttcgtaaag aatgagggct gaggcaacgg aaacattcag
     9121 cgactgcacc atgccgatca tcggaatgat gatgtcctga tccgccaggg ccaatgcttc
     9181 ctgcgtgatg cccgttttct cctgtcccat caaaatgcag gtcgggcgag tgtaatcaat
     9241 ttcgcggaaa tcgacagcgt tatcagaaag atgggttgcc agaatctgca tgccctggcc
     9301 tttgagatga gcgacggcat cgccaatggt gcggtgtgtt ttcacctgta cccagctgtt
     9361 actacccgcc gctgccgaag ccatggtgcg catgcggcta ccaggccaga cggcgtgaac
     9421 ttcatgtacg ccaacggcat ctgcggtacg aataatcgca gaaacgttat gaggtttgtg
     9481 gacctgctcc atgcagacgg tcagatcagg ctgccgcctg gcgagcattt cgcagatgcg
     9541 tgcataacgt gttgggttca taaaacatta atttcggttt cgggtgactt taatcacgtc
     9601 tggcatcacg cggattttgc gcatgatatt cgccagatgc acacggtcac gagcggtcag
     9661 acgaataaag gcgctgtaga cgcgaccatc tttctcttcc gtattcaaac tttgaatatt
     9721 cgaagtcgtg gtgttaattg ccgccgtcag gtttgccagc gcaccctgat gattgaacat
     9781 ctccaccttg atttcggtga tgaactcctg cgccgtctct ttatcccatt ccacagccat
     9841 aaacttctct ggctctttct ggtagccacg gatgttacgg caggattcat ggtggatcac
     9901 cagaccttta ccggggctga cgtgggcgat aatcgggtcg ccaggaatag ggcggcagca
     9961 tttcgcaaag gtgatcagca cgccatccgc gcctttgatc ggcagatgcc cgtggctttg
    10021 agtcgccggt ggaatggagg cgtccccatg ttgtagattt ttcgcgacca ccacgctcat
    10081 tgcgttacca aggccgattt ctgccagcag atcgtcaagc gttgccagct tcatgcgatc
    10141 cagctcgcgc tgaatatttt cctgcgggat ttcattgagc ttacggctac cacccaaagc
    10201 atggttgagc agacgacggc ccaggcttac agaatcatca cgcttgaggt ttttcagcaa
    10261 ctgacgaatt ttggcgcgcg ctttcgagct aacgacaaag ttcagccaag cggcattcgg
    10321 gcgagcgccc ggagcggtaa tgatttcaac ggtctgaccg ctagtaagcg gctgcgacag
    10381 cgggtaaggc tggcggtcga cgcgtgcgcc cacgcaggca tggccgatat cggtatgcac
    10441 tgcataagcg aagtcgacgg gcgttgcacc ggcaggcagc tcgacaatgc gcccttccgg
    10501 tgtgaaaacg taaatctcat ccgggaagag atcggattta acgctctcga taaattcaaa
    10561 cgaactaccg gcgctctgtt gcagctccag caggctttgc atccagcgct gggcgcgtat
    10621 ttgtgcggta gtactggttt cgccgtgctc tttataagcc cagtgcgcgg caacacccat
    10681 ctccgccatc tgatccatat cttcggtacg gatctggacc tcaaccggca cgccgtgcgg
    10741 gccaatcatc gaggtgtgca acgactgata gccgttcgct tttggaatgg cgatatagtc
    10801 tttcacgcgg cccggacgcg gcttgtacag gctgtgcatc tggcccagca cgcgataaca
    10861 ggtgtcagaa tcattgacga tcacgcggaa agcgtagatg tccatgattg agtgaaaacg
    10921 ctgctctttg agcaccattt tgcagtaaat cgaataaaga tgcttttcgc gaccactgac
    10981 gcggcacggt attcccgctt cctgcaaacg cccttcgatt tcagaaagaa tcttctggat
    11041 catctcttta cggttgccgc gcgcggcttt caccacttct ttgattacgc gataacggtt
    11101 gggatacagc gcctcaaaac ccagctcttc gagttcggtt ttaatgtggt ggatacctaa
    11161 acggtgcgcc agcgggctgt aaatttcgag agtttcacgg gcgatgcggc gacgtttgtc
    11221 cgggcgaagt gagcccagcg tgcgcatgtt gtgggtacgg tcggcaagtt tgatgaggat
    11281 gacgcggata tcctgcacca tcgccataat catcttgcga aagttttcgg cctgcgcctc
    11341 tttcttatcg cggaacttga gtttatcaag tttcgacacc ccctctacca gctcggcgac
    11401 gcttttacca aaaagctgtt ccatatcctg gtaggtggcg ggagtatctt caatcacgtc
    11461 atgcagcagc gccgccatca gcgtttcata gtcgagtttc atctcggcca gaatgcaggc
    11521 aaccgctacc gggtgcgtga tatagggttc accgcttgaa cgtgtttgcc cctcgtgagc
    11581 atcacgtgca acgagatacg cctgccgcag acgcttgatt tggtcttccg gcaggtaggt
    11641 ttgaatcagt tgattcaggc tttcaaacag atacaagggc gacccgcttt gtgattaacg
    11701 acgaccttca gcaatagcgg taacggcttg taattcagcg gcttcctgct cttgctgttc
    11761 ctggcgttcg cgaacgtcga ggatctggtt gttgatcaga ccttcttcga tttcgcgcag
    11821 cgcgattaca gtggttttat cgttttcttc cggtaccagc ggatcctttc cgcctacctg
    11881 catctgacga gcgcgacgcg cggcgaccag taccaggtca aaacggttac caattttctc
    11941 tacagcgtcc tgaacagtta cgcgtgccat acttaaaaag ctccacaggt gaagaaatga
    12001 ctgggcatga tactgaaatc aggttcagtc tgccaacaat ttgctgatta aagcgtcatg
    12061 acgctgcttt tggcggctca tgcgcagacg ttcggcgcga ataatggtct tcaaatcggt
    12121 caacgcggta tcgaagtcat cattcacaat caggtaatca tattcgtcgt aatggctcat
    12181 ttctgcaaca gcttgcgcca tacgctttgc aatgacctct tcgctgtcct gaccgcgacc
    12241 gcgtagacgg cggtccagtt caattttaga cggcggtaaa ataaagatac tccgcgcgtg
    12301 cggcatcttc tggcgaattt gctgcgcgcc ctgccagtcg atatcgagaa aaacatcgac
    12361 accggtcgcc agtacttgct caatggcctc acgcgaagtg ccatagtaat taccaaaaac
    12421 ttctgcgtgt tcgaggaacg catctctgct aatcatttct ttaaattcat catgattaac
    12481 aaagaaataa tgttcaccgt ggacttcacc aggacgcggt tggcgtgtgg tgtgtgaaac
    12541 agaaacctgg gtgtcataca acggttgggt ttttaataaa gcctgaatca ggctggattt
    12601 acccgcgcca ctgggggcag aaacaatata aagcgtgcct tgagccatga gtatctttcg
    12661 tatgtgatta gcgaaataaa gcctacatac gagcttatta tacacggcgc ggccatgtga
    12721 cgtagccctt gctcacactt tttgcgcaaa gttgttgcgt tttgcgtagc tgcttccgca
    12781 tttgcctgtg atttactgca ataaagacga ttctcaggaa gcgtcctcgc agactccgtt
    12841 tttgccactc ggctttgcct tcaccacgtt gtatatctgc cagcctgact acagcggagg
    12901 tgaagatgaa agtatggatg gcgatattaa taagtatctt gtgctggcaa tcatctgtgt
    12961 gggcggtctg tccggcctgg tcgccagcca gagcacagga agaaattttc cgccagcaac
    13021 agcaaataaa acagtgggac gatgactact ggaaggaagg aaaaagtgag gtggaagacg
    13081 gtgtttacga tcagttaagc gcccgtctta cacagtggca acgctgcttt gtgagcgagc
    13141 cccgcgacga gatgatgccg cctttaaatg gtgcggttat gcatccggtt gcccatacgg
    13201 gtgtacgcaa aatggcggat aaaaacgcat taagtctgtg gatgcgagaa cgtagcgatc
    13261 tttgggtgca gccaaaagtt gatggcgttg cggtaaccct ggtttatcgg gacgggaaac
    13321 tgaacaaagc aatcagtcgc ggtaatggcc tgaaaggcga ggactggacg cagaaagtta
    13381 gcttaatttc cgctgtgccg caaaccgtta gcgggccttt agccaacagt acgcttcagg
    13441 gggaaatatt tctccagcgc gaggggcata tccaacaaca aatgggggga ataaatgccc
    13501 gcgcaaaagt tgctggcttg atgatgcgcc aggacgatag cgacacgctg aattctctgg
    13561 gcgtttttgt ctgggcatgg ccggatggac cgcagttaat gtctgatcgt ttaaaagagc
    13621 tggctaccgc aggttttact ctaacgcaga cgtatacccg tgcggtgaaa aatgctgatg
    13681 aagttgcgcg cgtacgcaat gagtggtgga aagcggaatt acccttcgtc accgatggcg
    13741 tagttgtacg agcggcgaaa gagccagaat cccgccattg gctaccgggc caggcagagt
    13801 ggctggtggc ctggaaatat caacctgtag ctcaggttgc cgaagtgaag gcgattcagt
    13861 ttgcggtggg taagagcggt aaaatatcgg tggttgcgtc actcgcatct gtcatgctgg
    13921 atgataaaaa agtccagcgg gtgaatattg gttccgtcag gcgctggcag gagtgggata
    13981 ttgcgcctgg tgatcagatt ctcgtcagcc ttgccggtca gggtattcct cgcattgatg
    14041 atgtggtgtg gcgcggtgca gaacgtacaa aaccgacacc gccagaaaac cgctttaact
    14101 cgttgacctg ctactttgct tctgatgttt gtcaggaaca gttcatttca cgcttagtca
    14161 gtctg
//
LOCUS       DADMIB010000108        13903 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.108, whole genome shotgun sequence.
ACCESSION   DADMIB010000108 DADMIB010000000
VERSION     DADMIB010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13903
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.108"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            135..692
                     /locus_tag="JNZ89_002947"
     CDS             135..692
                     /locus_tag="JNZ89_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000863301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936753.1"
                     /translation="MAGVGFDGSSDISISAKNVNAFALRQTGNTVNGDTSVGWNWDSG
                     AYNALIGGASALILHFNINAGSCPAVQFRVNYKNGGISYRSARDGYGVELGWSDFYTT
                     TRKPSAGDVGAYTRAECNSRFITGIRLGGLSSVQTWNGPGWSDRSGYVVTGSVNGNRD
                     ELIDTTQARPIQYCINGTWYNAGSI"
     gene            695..1228
                     /locus_tag="JNZ89_002948"
     CDS             695..1228
                     /locus_tag="JNZ89_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000972171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8936754.1"
                     /translation="MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNF
                     QPDTLKMVYYHNGVIICIEKDVSAINPEGASVVELPDITANRRADISGKWLFKDGVVI
                     KRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKV
                     ESTDTSSLPVTFPEQPE"
     gene            complement(1257..1820)
                     /locus_tag="JNZ89_002949"
     CDS             complement(1257..1820)
                     /locus_tag="JNZ89_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000930007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8936755.1"
                     /translation="MAHGITSHRCKLCSILKNIKSGNPKTKEQYQLTKNFDVIWLWSE
                     DGKNWYEEVNNFQDDTIKIVYDENNIIVAITKDAPTLNPEGFSVVEIPDITANRRADD
                     SGKWMFKDGTVVKRIYTADEQQQQAESQKVALLSEAESVIQPLERAVRLNMAMDEERT
                     RLESWERYSVLVSRVDTANPEWPQKPE"
     gene            complement(1789..2493)
                     /locus_tag="JNZ89_002950"
     CDS             complement(1789..2493)
                     /locus_tag="JNZ89_002950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001706993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936756.1"
                     /translation="MWFETGDNGNEYFKWRSRQSTTTKDLMTLKWDALNILVNAVING
                     SLGVGSTNALGGSSIVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAG
                     DGKKFTLSSSNNSTKNATFNLWGASTRPVVAELGNEAGWHFYSQRNTDNSVIFSVNGQ
                     IQPSNWGNFDSRYVKDVRLGTRVVQLMARGGRYEKAGHAITGLRIIGEVDGDDEAIFR
                     PIQKYINGTWYNVAQV"
     gene            2730..3328
                     /locus_tag="JNZ89_002951"
                     /pseudo
     CDS             2730..3328
                     /locus_tag="JNZ89_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905087.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
     gene            complement(3357..3845)
                     /locus_tag="JNZ89_002952"
     CDS             complement(3357..3845)
                     /locus_tag="JNZ89_002952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001761054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936757.1"
                     /translation="MMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIG
                     AGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTR
                     SEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKG
                     LF"
     gene            complement(3858..6665)
                     /locus_tag="JNZ89_002953"
     CDS             complement(3858..6665)
                     /locus_tag="JNZ89_002953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000853438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8936758.1"
                     /translation="MKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNL
                     ERQARSFERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLER
                     LNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVT
                     RARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMSRVQALTRID
                     QNSPQFKALREQALKLGSETQFTAGDAASGQAFLAMAGFTPQAIQAALPGVLSMATAG
                     GMDLGETADIGSNILTQFGLSADQMDRVGDTLTAAFTRTNTDLRALGETMKYAGPVAG
                     KLGISLEQAAAMAGVLANMGIRGSDAGTAMRASLARLASPPKAAAEALKELGVSVSDA
                     GGKMRPMEDVLADLYKATRKYGEVDRVSFFKDIAGEEAFTSFMALVDAAGDGSLPKLR
                     KELEGARGEAERTAKVMANNLDGDLKSLSSAWEGLRIRIADLIDGPLRSVTQWLTRVV
                     SKVTALAQAHPALTRQLLIAGGALLAMTATVGSLSLAIGVLAGPLAKLRLGFSLLTGS
                     MNAVRVLPALWGMVTGSVSLLGGAIGALFSPVGLIVAALAGAAVLIWKYWDPIRAFFA
                     GVFSGIMERLTPLRETFERFGPVFDAIGSGISQVFNWFKSLLSPMESSKETLDKCTSA
                     GEIFGNVLGGALQLVLTPAKMLLDTLAWILEKLGVLPDEAERARKKIEDAQRAAILQD
                     KVALLQGDLAKINPPKPVENGNGTGGDNPKDNKPLTDSNTGTLRRLSKIADNTGKLVE
                     ETKKRIGPGDIVFKNLPRALAVRGEWQERKIAQVSKPAPAINITPVVPAPLPPALVPV
                     VAASSRPVAEAIRSPVASVPVTSRNREPVAFGFGGEIHVHLHNVVTQNPRELAKLVGE
                     MVRAEMERRARAGRGCFYDKD"
     gene            complement(6703..6807)
                     /locus_tag="JNZ89_002954"
     CDS             complement(6703..6807)
                     /locus_tag="JNZ89_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000333494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY8936759.1"
                     /translation="MCFEHIEDLVADIAAIFNWSPAEIFMMTPGEVVS"
     gene            complement(6816..7190)
                     /locus_tag="JNZ89_002955"
     CDS             complement(6816..7190)
                     /locus_tag="JNZ89_002955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000651574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8936760.1"
                     /translation="MKDIDTETRNNTVADNVTAVEDMAVERGVKLTRPIERGGEKITY
                     VEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLC
                     AVAVNFMSEPDSGAKSVQETAA"
     gene            complement(7246..7756)
                     /locus_tag="JNZ89_002956"
                     /pseudo
     CDS             complement(7246..7756)
                     /locus_tag="JNZ89_002956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310671.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
     gene            complement(7756..8940)
                     /locus_tag="JNZ89_002957"
     CDS             complement(7756..8940)
                     /locus_tag="JNZ89_002957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HAY8936761.1"
                     /translation="MSETRFHGARVTENTDLVTAINDVDSSVIGIVATADDADAKLFP
                     LNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLV
                     IGGSEDDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIADKLRAFVY
                     ASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKNGKNETFPAPAYACGLRAYID
                     HEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNR
                     TPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAG
                     KLIGAECWYDVVDNSTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEYFEPAFAVLG
                     GA"
     gene            9098..10207
                     /locus_tag="JNZ89_002958"
                     /pseudo
     CDS             9098..10207
                     /locus_tag="JNZ89_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494339.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
     gene            10456..13575
                     /locus_tag="JNZ89_002959"
     CDS             10456..13575
                     /locus_tag="JNZ89_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000580159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8936762.1"
                     /translation="MIGQFLSATEILAKNYVRNKMVKNPFYSNLKWNFIEKNIIRLTS
                     SPVKSVLCISAFSFVLLYVGYLNELFIKNNLLHYFPFRHSLTEWQTTILSGQLTIIGI
                     VYPLVIGLVSVLFQKKADRKIAQTAYQRYSGFMLAGLSGLFLSGFILLSVLIKTVFGS
                     YLYGIACLISILWLLINIVLSIWFFIVSLEILDDVKRQIIIKRYIAFEIVMPHICNKI
                     SAKLRLYPIYQKHNYSNLEITQADYKGEYISVASSYSKEDELSLYHRPFQLTLNLINY
                     QLKKKNHFASFVIGDNRTKETESTGKILFSVKNIKPDSLLIKILKQCFYRAPIKGGDF
                     SVSLTMQAITADTYMYLRDSDLISFDNAISALINNFNNLCDLYFFQDDNTNNNFLLIT
                     TELFERSFQYEFSDEVYKISNNSMDKINLSERFFELCLWSGVRIINNRKHLISNELCI
                     YMGITRSQWSILTEWFRNNQSLLNASLRSRYNRILRTYITVWEQYQESINFRFCNTEN
                     SDLFELFCKTQLQELPSMIIDATQTRDPSTIDTAVDLINRWQHSMNIDSHSVEKYSYK
                     GQLFNPGFFISKKLNFNSDREWFNIAIINALTDMRICTCLYLTSRINTSDKLMTHYIK
                     LILEGKLIDQTGGYETPTEEIDNASQLIKILIRICLWTWSENMEHNGWMNSLARRLRD
                     YDKTDMVMGRVYSNVFDCGFIDMEQSWVQLLLIFSNKNDSVSKEIKEAIENNYITYRE
                     KQRLIGVLSKICNSIEYTKIKLTLTLDDLQTKKENLRKLLQEHINMLKKDLDMRLQDA
                     AIDVHRLDSTARKTSEHLRKRIKKTLPLSLFKSIDFKQASDCFTKHKISIKIDKEPYA
                     EGIESIPYINEGDIQADLILKDIQRIILSNLFSTGCSQHTVIEDFNMLIDHIKSSADL
                     AGKLVLVMSKEIFQQYNRMLFDNPNLRELMRKNDDGSMNITTESGTRKVYFLPFVNQP
                     FSLVVKDNYFTKLIIREYDNNKLVNVTSENIKSDSDKFKLTLNYELNIVFEGNADLKI
                     AHSQRVTSE"
     gene            13711..>13903
                     /locus_tag="JNZ89_002960"
     CDS             13711..>13903
                     /locus_tag="JNZ89_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HAY8936763.1"
                     /translation="MFRCPLCGASARIRTSRPENDSNTVRQKYYQCNNLECGVCFSTL
                     EAFHKFTSKHASPIHSSEGI"
BASE COUNT         3816 a         3409 c         3088 g         3590 t
ORIGIN      
        1 gcacaagcgg ggagaaaata ccgttactca gtacagcgaa tacctggacc aatcgacaaa
       61 cattcagcgg tggcctttct ggggaactgt ccggcaatgc cgctactgca acaaagctga
      121 aaacagcacg aaaaattgct ggagttggtt ttgatggttc tagcgatatt tcaattagtg
      181 ccaaaaatgt caatgcattt gcactccgac aaacaggtaa tactgttaat ggtgatacat
      241 ccgttggatg gaattgggat agtggtgcat ataacgccct gattggtggt gcatctgcat
      301 taattcttca ctttaatata aatgctggta gctgtcctgc cgtacaattc cgtgtgaatt
      361 ataaaaatgg tggcatttcc tacaggtcgg ctcgtgatgg ttatggggtt gaattaggtt
      421 ggtcagattt ctataccacg acacgaaaac cttcagcggg agatgttggt gcatatacgc
      481 gggcagaatg taactcaagg tttattacag gtattcgcct tggcggtctg tcatctgttc
      541 agacatggaa tggtcccggc tggtctgaca ggtcaggtta tgtcgttacg ggttcagtta
      601 acggaaaccg tgatgaatta attgatacaa cacaggcaag gccaattcag tattgcatta
      661 atgggacgtg gtataacgcg gggagtattt aacgatgatg cacttaaaaa acattactgc
      721 tggcaaccct aaaacaaaag agcaatacca gctaacaaag caatttaaca tcaaatggct
      781 ttattcagat gatgggaaaa actggtatga ggaacaaaag aatttccagc cagacacttt
      841 gaaaatggtc tattaccata acggcgttat tatttgtatt gaaaaggatg tttcagcaat
      901 taatccggaa ggcgcaagcg tcgttgaatt acctgatatt acagcaaatc gccgggctga
      961 tatttcgggg aaatggttgt tcaaagatgg cgtagtgata aagcgaactt ataccgagga
     1021 agagcagagg caacaagcgg aaaatgaaaa gcaaagcctg ttgcaacttg tcagggataa
     1081 aacccagcta tgggactcac agctacggct gggcatcatt tccgacgaga ataaacaaaa
     1141 attaaccgag tggatgctct atgcgcagaa agtcgaatct acagacacct ccagcctgcc
     1201 agtaacgttt cccgaacaac cagaatgaga gaaggcccga tattgggcct taatttttac
     1261 tcaggctttt gtggccattc gggatttgct gtatccacac ggctgaccag aacgctgtag
     1321 cgttcccatg actccagtcg tgtgcgttcc tcatccatcg ccatattcag cctgacagcg
     1381 cgttccagtg gctgaataac gctttcagct tcagaaagca acgcgacctt ttgtgattcg
     1441 gcctgttgtt gctgttcgtc tgctgtataa atccgcttaa ccacagttcc gtccttaaac
     1501 atccacttcc ctgaatcatc ggcacgacga ttggctgtta tatctggaat ctcaacgaca
     1561 ctaaagcctt cgggattaag cgttggggca tctttggtta tggcaacaat aatattattt
     1621 tcgtcgtata caatctttat ggtgtcgtcc tgaaagttat ttacttcctc ataccagttt
     1681 ttaccgtctt cggaccataa ccagataaca tcaaaattct ttgttagctg atattgttct
     1741 tttgtttttg gatttccgga cttaatattt tttaatatgc tgcataattt acacctgtgc
     1801 gacgttatac catgtgccat tgatgtattt ttgtattggt ctgaagatgg cttcatcatc
     1861 gccatctact tcaccaatga ttcttaatcc ggtaattgcg tgtccggctt tttcataacg
     1921 accaccacgc gccatcaatt gaacaacacg cgtacccagg cgaacatctt ttacatagcg
     1981 tgaatcaaaa ttcccccagt tgctgggctg tatctgaccg ttaacagaaa atattaccga
     2041 gttatctgta tttcgctggc tatagaaatg ccatcctgcc tcattgccta actctgcaac
     2101 tactggacgg gttgaagcac cccataaatt aaacgttgca ttctttgtgg agttgttgga
     2161 gctggatagc gtgaattttt taccatcccc ggcctgaata tttttaaaag caatagccac
     2221 tccattctga aagcggaata cacgctgact attagcataa acatccagaa taccgtctcc
     2281 attctgttta aatccggtgt cattatcacc aagaacaata gagctaccac ctaacgcatt
     2341 cgtcgaacca actccaagac tgccattaat gacagcatta acaagaatat ttagtgcatc
     2401 ccatttcagc gtcatcaggt cttttgttgt ggtgctctgg cggcttctcc atttgaaata
     2461 ttcattgccg ttgtcgcctg tttcaaacca catgtatgaa tcagtgtcac catcggcatc
     2521 atttttaaat ccaatcttcg cccagtcagt atttcgaatc caggcaagga ttgagtcatt
     2581 ttcaaaagta agcccaccgg acaaggtatc gccatttttt tgcacggcgt taccagccct
     2641 gtttaccgtt tcctgtaaac cgaggtttta aataatggcc gtttctggcc tgcatggcat
     2701 gatttgcgct tttggacggg agattcagtg tgctgattgg ctatgtaagg gtatcaacaa
     2761 atgaccagaa tacagacctg caacgaaacg ctcttgtttg tgcaggatgt gaacaaatat
     2821 ttgaagataa attaagcggg acaaagacag accgaccggg attaaaacgc gctttaaagc
     2881 gccttcaaaa ggtgacacgc tggttgtctg gaaactggat cgcctcgggc gaagcatgaa
     2941 acatctgatt tctctcgtcg gggaactacg ggagcgaggg attaattttc gcagtctgac
     3001 cgacagcata gacacatctt ctccaatggg gcgttttttc ttccacgtga tgggtgccct
     3061 ggctgaaatg gaacgtgaat taattgttga acgtacactg gccgggctgg cggcagcgcg
     3121 cgcaaggggg cgcacaggcg gacgtcgacc gaagctgaca aaagaacagc atgagcaaat
     3181 agcaaggcta atcaaaaacg ggcacgacag aaaacaactg gcaataattt acggcattgg
     3241 cacatcgacg atttatcgtt atcaccctgt aggcgatata cagactgaag aaacaaccgg
     3301 gcagactcag gaaaatgaaa accgctaatc tgaccattag cggtttttgt gttaaatcag
     3361 aacagccctt taactgaact ggccgcgctg ttaagagatg atgtcacctt atctttgaag
     3421 ccggacagca tatcactgaa cgatgaggat tgcaggcgct cccgcaaatc ctcatcacag
     3481 cgttcaagag tcagtgaaaa ttctatcttt ttcgccttac cgtagcgatc aaactcggag
     3541 cgggtcgtat tcgtttcagt caggacatac atgccgtaaa tctgcccgac gccatcaatc
     3601 aaaggccagg gtcgtcctgt atacgcctgc gtagtcagca gcgacagcga cacttcgcca
     3661 cctgtaattt caggataaag cacaccagaa agaacgatgc gatcatcacc tgcaccgata
     3721 tactgccagc ttgctgaacg gttaacgcgt tcatttttca catgccgcca gcttttgttt
     3781 tgctgtaact gctgatgcgg cagcgtgcgc agctcaaaaa caaacatgcc gtagatcatc
     3841 atcatggcca tgactcctca atctttatcg taaaaacagc cacgcccggc acgggcgcgc
     3901 cgttccattt ctgccctgac catttcaccg accagtttcg ccagttcgcg gggattctgc
     3961 gtaacaacgt tatgcagatg aacatgaatt tcaccaccaa atccgaaggc aacaggctcc
     4021 cggttacggg aagttacagg aactgatgcc actggagatc gtatagcctc cgccaccggg
     4081 cgggagctgg ccgcaacaac agggaccagc gccggaggca gcggagccgg aaccacgggt
     4141 gtgatattaa ttgcgggggc aggcttactg acctgcgcaa tcttccgctc ctgccactcc
     4201 ccacgaacag caagtgctcg gggcaggttt ttaaagacaa tatcgccggg gccaatgcgt
     4261 tttttcgtct cctcaaccag cttacctgtg ttatcagcaa ttttgctgag tctgcgcagc
     4321 gtaccggtat tgctgtctgt gagcggttta ttgtctttgg ggttatcacc tccggtgcca
     4381 ttgccatttt ccacaggctt cggcggattg attttcgcca gatccccctg aagcaaggca
     4441 accttgtcct gaagaatggc cgcacgctgt gcgtcttcga ttttcttgcg cgccctttcc
     4501 gcttcatccg gaagcacacc aagcttttca agtatccacg ccagcgtatc cagcaacatt
     4561 tttgcaggtg tcagaacaag ttgtaacgca ccgccaagaa cgttaccgaa tatctcgcca
     4621 gcactggtac atttatccag agtttccttg ctggactcca tcggtgacag cagcgattta
     4681 aaccagttaa acacctggct gatcccactc ccgattgcgt caaaaacagg accaaaccgt
     4741 tcaaaggttt cgcgcaacgg ggtcagcctt tccataatcc cgctgaacac cccggcaaaa
     4801 aatgccctga tgggatccca gtatttccag ataagaacgg cagctccggc aagcgcagcc
     4861 acgataagac caaccggact gaacaacgcc ccgatagcgc ctcccagtaa agaaacggaa
     4921 cccgtcacca ttccccatag tgctggcaga accctgacag cattcattga tccggtcagg
     4981 agggaaaaac caagacgcag ttttgccagc gggccagcaa gcacaccaat agccagcgac
     5041 aacgagccaa ccgttgcagt cattgccagc aatgcaccgc ctgcaatcag tagctggcgc
     5101 gtcagtgcgg gatgggcctg cgccagcgcc gtcacctttg ataccacacg cgtgagccac
     5161 tgcgtgacag aacgcagcgg accgtcaatc agatctgcaa tgcggatgcg caacccttcc
     5221 catgcactgc tgagtgattt cagatcgccg tcaaggttgt tggccataac ctttgccgtg
     5281 cgttcagcct caccgcgcgc gccttcaagt tcttttctca gtttgggtaa ggagccgtca
     5341 cctgccgcat caacgagggc cataaatgat gtgaaagcct cttctccggc aatgtcctta
     5401 aagaacgata cccggtcaac ttccccgtat ttgcgggtag ctttataaag gtcagccagc
     5461 acatcctcca tcgggcgcat tttgcccccg gcatccgaga cagacacgcc aagctctttc
     5521 agcgcctctg ctgccgcctt tggcggtgat gccagacgag ccaggctggc acgcattgcc
     5581 gtaccagcat cactccccct gatacccata ttcgccagca cgcccgccat cgctgcggcc
     5641 tgctccagag atattcccag cttacccgcc accggacctg catatttcat ggtttcaccc
     5701 agtgcgcgaa ggtcagtgtt ggtacgggta aacgctgcgg tgagtgtgtc gccgacccgg
     5761 tccatctggt cagcagaaag accgaactgc gtcagaatat ttgagccaat atccgccgtc
     5821 tcaccgaggt ccataccgcc agccgttgcc atgctcagta cgccagggag cgcagcctga
     5881 atggcctgtg gtgtaaagcc agccattgca agaaatgcct gtccactggc ggcatcgcct
     5941 gcggtgaact gcgtttcaga gccaagtttt aacgcctgct cacgcagcgc cttaaactgc
     6001 gggctgttct ggtcgattcg cgtcagtgcc tgaacgcggg acatctcttt gccgaacccg
     6061 atcgcaggct gcaaaaaacg cccggcagca tagccgcccg ccgctgccgc accaattgcc
     6121 agcgcaccac ctgttttcag ttttcccgct gtttcctgcg cgcgcgaata ccgctcacgc
     6181 gcccgtgtta cacgcgcaag cgcctgccgt tcgcgttcaa gctggttgtt gtactgttcg
     6241 gtgcgtctga tggcctgctg gatggtgtta tcgctgcctg tcagggaaat gccgtggcgt
     6301 ttcagctctc cgccaagctc ccgcattttc tgaatttccc gtgtgcgcga ttcattcagg
     6361 cgttcaagcc gggtgcttaa ctgctgcatc agcttttgtt gtttttcgct gagcactgta
     6421 cccgtgcgtt gtaactgatt aagggcgtta agctggcgtc gtgctttcac gatgccagca
     6481 tccgctttac tgacagcgtc acgggcgcgc tcaaatgatc gcgcctgacg ctcgagattt
     6541 ttgatcgccc cctgcgttcg ctggatggag tcaccaaact gccccatcag gcggcgggcg
     6601 ttttcggcag gccgggtcag cctgtcaacg gcgctgaaag cgacccggat atcaagagtc
     6661 ttcattgtct gcattcccgc tacgaagtgc cgcccgctca cgtcagctaa ccacttcgcc
     6721 gggcgtcatc atgaagattt cggcgggcga ccagttaaaa atggcggcaa tatccgccac
     6781 cagatcttcg atgtgctcaa agcacaccag ggtgattacg ctgccgtctc ctgcacgctc
     6841 ttcgcgccag agtctggctc gctcataaaa tttacagcca cagcgcacaa ctgaataaaa
     6901 tcgcgtgacg acattttttt aatcatcact tcatccagtc gtggcgaggt cacgcgaggc
     6961 aacagcgtga acatggtatc cgctttcaga ttcagcacat cagacagcga cagaccacgc
     7021 agggatccag cctgctcaat agccccggtg atctccacat acgtgatttt ttcgccacca
     7081 cgctcaattg gtcgggtcag ttttacgcca cgttcgacag ccatatcctc aactgccgtc
     7141 acattatccg ccacggtgtt attccgggtt tcagtatcga tgtctttcat ctgttgtctc
     7201 cttttcagtc agaggcgacg cactgcgccg ccagcatatt acttatcagc caagcccaag
     7261 cgcggaacgg atgcgatcgg gcacaatgtc cttgccgtcc ttccggtaaa tgaagttcag
     7321 caggtcaatc tcccacaacg ggcgatcgtt aacactcagc ttgtagtagg tgttttaatg
     7381 gcgtaagtgt gtgatgtggc ttcgccctgt ttggcttccc ccatatcaat ttccgtcaca
     7441 cgtccgcgca tttcgacttc atacaggtcg ctttctgcat cggtgtagta ttcacccgca
     7501 aaacgcagca gcgtgccgtc aatcgtgccg ccatacttaa ggaacagctc acgaactgcg
     7561 cccccatgac aaagctcgca tcaagcgcgg agtcgtccag accgagatca atacttaccg
     7621 cacccatcat gccaccaccc cggtagctgt cggttttgcg cgtcagctta ggcagagtga
     7681 cggacgtcac attacccact tcgttttcac catccacaaa cagcgtaaaa aagcgaagat
     7741 gttttggcac agccatcagg cacctcccag caccgcaaat gcgggttcaa agtattcatc
     7801 agtaaacgtc tggtaaagct ccatgtcttc cagtggcgga acgggcgtat atttgtagcg
     7861 aatacgcaca cgtccctgac gtaaatccgt ggtgctgtta tccaccacgt cataccagca
     7921 ctccgcgcca atcagtttcc cggcagtcac cagtgaatcc agttttgccc tgatggcact
     7981 gataacatcc ttcacattcg caggcgtcag tggactgtcg atggtttcaa actgcgcttc
     8041 cgcaattgaa tcagccagca cctgtgcggt tcgggtatac acctcaaaga tgtaggcgtt
     8101 cgtttccggt gtgcggttac cccagaagcg gaacccgttg cgacgaataa tggtcgtgat
     8161 ttctttgttg ttgaggctgt tggcatcgct gtcttcggcc tgcaacgacc agaacacatg
     8221 cctcgacatc cccagcacat ttttaaccgg aacgttggac agcgatttgt gccatccctg
     8281 ttcatggtca atgtacgcac gaaggccgca cgcataggca ggcgcgggga acgtttcgtt
     8341 tttgccattt ttcgggttgt aggcgatgaa gtccggccat aagagcatca cctcacgttc
     8401 gttgaatttc tggcggtagg taattgcctc ggccatcgtg ttacagccat gacatgaggc
     8461 atacacaaac gcgcgcagtt tatctgcaat cacgcacagg gattttgtta ccgcctccgt
     8521 gtccagctcc ggcgcggcca gaatacgcgg acggtatccg atgctttcat cctgctctgc
     8581 aacaagcagc gcatacatcc ccgtatagct gccgtcatcc tcagaaccac cgataaccag
     8641 ttgatcctgc gtctttccgt cttcttcttt gtgttcagcc acgcgaacga cgatcacctt
     8701 tgtgctcacc tggtctgcga tggccttaag cgcacgataa agcgtccccg ttgtcccgca
     8761 ttttcccagc acgtcattga cgcgggtcag cagtgtgggc ttgttcagcg ggaacagctt
     8821 cgcgtccgca tcatccgccg ttgccacgat accgataacg ctggaatcaa catcgttaat
     8881 cgctgttacc aggtcggtat tctccgtaac acgggcacca tgaaaacgag tttcactcat
     8941 agcttcagcc ccttgtatcc gttaaatgat tcagcaacaa tcatcaccca ccacgcgcgt
     9001 aatctcaccc ctgcgccgtt ctcccgccac ggcgacaaca aaaagcagta accccctccg
     9061 cacgcacatg cgaccatgcc gcacagggag ggagcagatg accgacacca ccatgcaatt
     9121 gctcagtcag ggcacggccc ccgtgaaaat gccggatttt gatattctct cggagggtaa
     9181 aacgctgtca ggcgtggcgg agcgcctgat gagcctgtaa ctgaccgaca accggggatt
     9241 tgaggcggac cagctcacca tcacgctgga tgatgcggat ggtcagttgc agctaccgcc
     9301 acggggcgcg cgtctgacgg ttctcattgg ctggaaaggg gaaccgctga cagaaaaagg
     9361 cacttacatt gttgatgaaa tcgctcacga aggaccgccg gacaggctga ctgtttcagc
     9421 cagaagcgca gattttcggg atgaatttaa cgttaaacgt gaggtgtcct ggcatgatgt
     9481 gaccgttgag cgtgtggtat ccgccatcac tcatcggtac ggtctgaaac cgcaaatcag
     9541 cgaaatgctg atggatatcg aaatcgacca cgccgaccag accgaagaaa gcgacatgtc
     9601 ctttcttacg cgcatggcgg aaatgctggg agcaatcgcc acggtaaaaa gcggcaatct
     9661 gttattcatc atgccaggtg gtggcgtgaa cgcacagggg cagccgttgc cctcgttcgc
     9721 cattacacgc agcagcggcg atcgccatca gttccgcatt gctgaccgcg aggcgtatac
     9781 gggggtacgc gcctactggc ttgatcttaa ttacgggaaa aagaaaaaag tcagcgtgaa
     9841 acgccgcaaa ccgccaaaac ccaaaaagga gaaaagcagc agtcgggaag gcgactatat
     9901 ggaaggtgcg gaaggcaacg tgtttgtgtt acgcaagact tatcagaacg agcaggcagc
     9961 aagacgcgca gcggcggcaa agtggcagca gctacaacgc ggagccgcat cattctccat
    10021 cacgctggcg cgtggtcgtg cagaactcta tcccgaaatg catggcacag tgacaggctt
    10081 taaaagcgag attgattatc aggactggac tattgcaaaa gccgagcaca ccattgataa
    10141 cagcggcttt accacgcagc ttgaacttga agcaaaaatc ccggaatgga tagcagaaac
    10201 agaataaatc tcttaaaaat attatttttg agatgtgctt ctacactgac agtaagaaca
    10261 aaagataatg tatcagccca ctagatgtca gaggttgggg catcaaccag atgctaacaa
    10321 taatacggat gtttttccca catgacagag gaagtcaagt ataatcttca cagtccatcc
    10381 cgtccaaggg aatatgactc aatagtaaaa gttccagttt agttagtaga cccacacttt
    10441 atagaagagt aattcatgat tggacaattt ttaagtgcaa cagagatttt agcaaagaac
    10501 tatgttcgta ataaaatggt taaaaatcca ttttattcga atttaaaatg gaattttatt
    10561 gaaaaaaaca tcataagatt aacatcctca ccggttaaat cagtactttg catatcagct
    10621 ttttcatttg tactacttta tgttggatat ttaaacgaat tatttataaa aaataatctt
    10681 ttacattatt tcccgtttag gcattcatta accgaatggc aaacaaccat tttaagtggc
    10741 caattgacaa ttattggtat tgtatacccc cttgttatag gtttagtaag tgtcttattc
    10801 caaaaaaagg cagatagaaa aatagcccaa actgcttatc agcgttactc aggattcatg
    10861 cttgctggac tcagcgggct tttcttatca ggatttatac ttctcagtgt actaattaaa
    10921 actgtctttg gaagttatct ttatggtata gcttgtctaa tcagcatatt atggcttttg
    10981 ataaacatag ttctttctat ttggttcttt atcgtgagtc ttgaaattct tgatgatgta
    11041 aaacggcaaa taattataaa gcgatacatt gccttcgaaa tagtaatgcc ccatatttgt
    11101 aacaaaatat cagccaagct taggttatac cctatctatc aaaaacataa ctattcaaat
    11161 ttagaaatca cgcaagccga ttacaaagga gaatacatat ctgtggctag cagttattct
    11221 aaggaagatg agttaagttt atatcaccgt ccttttcaac ttactcttaa tcttattaat
    11281 taccaactaa aaaagaagaa tcattttgcg tcatttgtca ttggtgataa tcgtacaaaa
    11341 gaaacagaat ccacgggtaa gatacttttt agcgttaaaa atatcaaacc agacagctta
    11401 ttaataaaaa tacttaagca atgtttttat agggctccga ttaaaggagg agatttttcc
    11461 gtaagtctta caatgcaggc tataacagca gatacgtata tgtatctgcg ggattctgat
    11521 ctcattagtt ttgacaatgc tatctctgca ttaattaata actttaataa tctctgcgat
    11581 ttgtattttt ttcaagatga taataccaac aataacttct tactgatcac tacagaatta
    11641 tttgaacgga gttttcaata tgagttttca gatgaagttt ataaaatatc aaataattcc
    11701 atggataaaa ttaatctttc tgaaagattt tttgaattat gtctttggag cggagtgcgt
    11761 attatcaata atagaaaaca tcttatcagc aatgaacttt gtatctatat gggaattact
    11821 cgttcacaat ggtcaatatt aacagaatgg ttccgaaaca accaatcact cttaaatgcc
    11881 tcgcttcgtt cacgttataa tcgtatatta agaacctata tcactgtttg ggagcaatat
    11941 caagaaagca taaactttcg tttctgcaat acagagaatt cagatttatt tgaattattt
    12001 tgcaaaacgc aactacaaga acttccatcg atgattattg atgcaacaca gactcgcgat
    12061 ccttctacta ttgatacagc cgtcgatctt attaaccgat ggcagcactc aatgaatatt
    12121 gacagccatt cggtagaaaa atacagttac aaaggccagc tttttaaccc gggttttttc
    12181 atatccaaaa aactaaactt caattcagac agagagtggt tcaatattgc catcataaat
    12241 gcgttgactg acatgcgtat atgcacatgt ctttatctga catcaagaat caatacttct
    12301 gacaaactaa tgacacatta cattaaactt attttagagg gtaaacttat tgaccaaacc
    12361 ggtggatatg aaactcccac tgaagaaatt gataatgcaa gccaactaat caagatatta
    12421 attagaatct gcctgtggac atggtctgaa aatatggagc acaatgggtg gatgaatagt
    12481 ttagcaaggc gtttacgtga ctatgataaa acagacatgg tgatgggcag agtttacagt
    12541 aatgtttttg actgtggatt tattgatatg gaacaatcat gggttcagct attattaatt
    12601 ttttctaaca agaacgatag cgtatcaaaa gaaataaaag aagcaataga aaacaactat
    12661 ataacatatc gtgagaagca acgactcatt ggagtattat caaaaatttg taactccatc
    12721 gaatacacta aaatcaagct gactttaaca ttggacgatc tccaaacaaa aaaagaaaac
    12781 ttaagaaagt tgcttcaaga gcatattaac atgctaaaga aagatcttga tatgagactt
    12841 caggatgctg ccatagatgt acatcgacta gatagcactg cacgtaaaac atcagaacat
    12901 cttcgtaaac gcatcaagaa aacgctccct ctttcacttt tcaaatctat tgattttaag
    12961 caggctagcg attgtttcac aaaacataag atatctatta agatagataa agaaccgtat
    13021 gccgaaggaa tagaatccat cccttatatc aatgaaggtg atattcaagc agacttaatt
    13081 ctcaaggaca tccagagaat aatactttca aatttattta gcactggctg ttcgcaacat
    13141 accgtaatag aagatttcaa tatgttgatt gatcacataa aatcatctgc tgacttggct
    13201 ggcaaactgg ttcttgtgat gagtaaagag atctttcagc aatataatcg tatgcttttc
    13261 gataatccca acctcagaga actaatgaga aaaaatgatg atggctctat gaacataact
    13321 actgaatccg gtacccgtaa ggtttacttc ttaccatttg ttaatcaacc attttctctt
    13381 gtggtaaagg ataactactt cactaaatta attattagag aatatgataa taataagtta
    13441 gtaaatgtca cttcagagaa tatcaaaagt gactcagata aattcaagct aactcttaac
    13501 tatgagttga atatagtatt tgaaggaaac gctgatttaa aaatagctca ctcgcaaaga
    13561 gtgacatcag aataatatct ttgacggcgc tccttagagt gccgttcgtt tattaactaa
    13621 tgctaaaaat cattatatag agaaagtcat gtttaaatct tagagaatac aacctagaat
    13681 agtgtaagca ctacaataag agaggtcgct atgttccgtt gtccgctttg tggcgcatct
    13741 gcccgtatcc gcaccagtcg tccggaaaat gattcaaaca ccgtgagaca aaagtattat
    13801 cagtgtaaca atctagaatg cggcgtatgt ttctcaacac tggaagcctt ccacaaattc
    13861 acttcaaagc acgcctcccc cattcactca tcagagggca tcc
//
LOCUS       DADMIB010000109        13658 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.109, whole genome shotgun sequence.
ACCESSION   DADMIB010000109 DADMIB010000000
VERSION     DADMIB010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13658
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.109"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..1887)
                     /locus_tag="JNZ89_002961"
                     /pseudo
     CDS             complement(1..1887)
                     /locus_tag="JNZ89_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311868.2"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
     gene            2285..2983
                     /locus_tag="JNZ89_002962"
     CDS             2285..2983
                     /locus_tag="JNZ89_002962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HAY8936764.1"
                     /translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRISMTSIFGLASLG
                     IGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPTHESF
                     IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI
                     SIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP
                     ALLLAMPLSAAWFA"
     gene            3089..3164
                     /locus_tag="JNZ89_002963"
     tRNA            3089..3164
                     /locus_tag="JNZ89_002963"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3122..3124,aa:Phe,seq:gaa)
     gene            complement(3313..3849)
                     /locus_tag="JNZ89_002964"
     CDS             complement(3313..3849)
                     /locus_tag="JNZ89_002964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HAY8936765.1"
                     /translation="MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAV
                     VFLFSVGYYVLIWQPLSERIVQQETMLQQLVAMNTRLRSAAPDIIAARKSATTTPAQV
                     SRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
                     AAEKTGMVNVQRLEFGRG"
     gene            complement(3851..5029)
                     /gene="gspL"
                     /locus_tag="JNZ89_002965"
     CDS             complement(3851..5029)
                     /gene="gspL"
                     /locus_tag="JNZ89_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000097227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HAY8936766.1"
                     /translation="MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQ
                     TDAIRLYIPGEWISVWQVELPDVARKQIPTILPALLEEELNQDIDELHFAPLNIDQQL
                     ATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGVMAGDAQRVICRIDECRGWS
                     AGRALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAVTTYGEP
                     EGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQA
                     EEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEM
                     RGFTFDQKRQILHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK
                     "
     gene            complement(5026..6003)
                     /gene="gspK"
                     /locus_tag="JNZ89_002966"
     CDS             complement(5026..6003)
                     /gene="gspK"
                     /locus_tag="JNZ89_002966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspK"
                     /protein_id="HAY8936767.1"
                     /translation="MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQ
                     EYQQALWYSASAESLALSALSLSLKNEKRVHLAQPWASGPRFFPLPQGQIAVTLRDAQ
                     ACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL
                     GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMIRQQININ
                     TLDVTQSVILEALFDPWLSPVQARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQL
                     KTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGESE"
     gene            complement(6006..6605)
                     /gene="gspJ"
                     /locus_tag="JNZ89_002967"
     CDS             complement(6006..6605)
                     /gene="gspJ"
                     /locus_tag="JNZ89_002967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspJ"
                     /protein_id="HAY8936768.1"
                     /translation="MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVADH
                     DQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGV
                     VNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG
                     TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ"
     gene            complement(6602..6973)
                     /gene="gspI"
                     /locus_tag="JNZ89_002968"
     CDS             complement(6602..6973)
                     /gene="gspI"
                     /locus_tag="JNZ89_002968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspI"
                     /protein_id="HAY8936769.1"
                     /translation="MKRGFTLLEVMLVLAIFALAATAVLQIASGALSNQHVLEEKTVA
                     GWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYWRTIPLNTGNALLQAVDIEVSRH
                     EDFSSVIQSRRAWFSAVGGQQ"
     gene            complement(7033..7533)
                     /gene="gspH"
                     /locus_tag="JNZ89_002969"
     CDS             complement(7033..7533)
                     /gene="gspH"
                     /locus_tag="JNZ89_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001115132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspH"
                     /protein_id="HAY8936770.1"
                     /translation="MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSEPPAKKAAQDF
                     LTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQWLPVSATRLSAQVTVPKQVQML
                     LQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS
                     AAQNAC"
     gene            complement(7537..7992)
                     /gene="gspG"
                     /locus_tag="JNZ89_002970"
     CDS             complement(7537..7992)
                     /gene="gspG"
                     /locus_tag="JNZ89_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003912123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HAY8936771.1"
                     /translation="MNSLSRTHKPRAGFTLLEVMVVIVILGVLARTVVPNLLGNKEKA
                     NRQKAISDIVALENALDMYRLDNGRYPTTEQGLEALIQQPANMADSRNYRTGGYIKRL
                     PKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ"
     gene            complement(8009..9232)
                     /gene="gspF"
                     /locus_tag="JNZ89_002971"
     CDS             complement(8009..9232)
                     /gene="gspF"
                     /locus_tag="JNZ89_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HAY8936772.1"
                     /translation="MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEA
                     RMNASAGGMLQRRRHAHRRVAAADLALFTRQLATLVQAAMPLETCLQAVSEQSEKLHV
                     KSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ
                     RQRLKSRLLQAMLYPLVMLVVATGVVTILLTAVVPKIIEQFDHLGHALPSSTRALIAM
                     SDALQASGVYWLAGLLALLVLGQWLLKNPTMRLRWDKTLLRLPVTGRVARGLNTARFS
                     RTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGSSLRAALAELRLFPP
                     MMLYIIASGEQRGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVI
                     AILEPMLQLNNMVGM"
     gene            complement(9232..10724)
                     /gene="gspE"
                     /locus_tag="JNZ89_002972"
                     /pseudo
     CDS             complement(9232..10724)
                     /gene="gspE"
                     /locus_tag="JNZ89_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525635.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
     gene            complement(10724..12784)
                     /gene="gspD"
                     /locus_tag="JNZ89_002973"
                     /pseudo
     CDS             complement(10724..12784)
                     /gene="gspD"
                     /locus_tag="JNZ89_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020234996.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
     gene            complement(12814..13643)
                     /gene="gspC"
                     /locus_tag="JNZ89_002974"
                     /pseudo
     CDS             complement(12814..13643)
                     /gene="gspC"
                     /locus_tag="JNZ89_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238556.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspC"
BASE COUNT         3060 a         3934 c         3523 g         3141 t
ORIGIN      
        1 ttgacacgga aagtcatatc agcgctatgc gcatcctggg ggttcatcac cactgacggg
       61 aaactctgct ggcggaacat cgctttttgt aggtctttga cgtcgaaact gacatacaga
      121 tcgtgcatct cctgacacaa ctggcgcaaa gtgtagtcgc gatagcgcac cggatatttg
      181 ttataaacgc tcggcaacac ctcagccagc ggcgagtcat cctcaatatg ctgttcaaac
      241 tgcgccaaca tctctaccag ttgtgccagc ttctcgtggc tttccgccgg agttaataag
      301 aacagaatgg agttgagatc gcacttctcc ggcacaatgc cgttctcacg cagatagtgc
      361 gccagaatcg tcgccggaac gccaaagtcg ctatattcgc cggtttcggc attgatacct
      421 ggtgtagtga gtaacagctt gcacggatca acaaaatact gatccgcggc atatccttca
      481 aagccgtgcc acttcgcccc cggctcaaaa ctgaaaaaac ggcggtcgct ggctaacact
      541 gatgtcggat aatcctgcca caatttgcca tcaacaacgg gcgggataaa cgggcggaac
      601 agcttacagc gcgcaagaat agccttgcgc gactcaatac ccaactcaac gcactcagcc
      661 cacagccgac gcccactctc cccttcatga attttggcgt taacatccag tgcagcaaac
      721 agcggataga aagggctggt agaagcatgg agcataaagg cgttattcaa ccgcttatgc
      781 gggcaaaaac gcgcctgtcc gcggatatgg ttatcttttt tatggatctg cgacgtctgt
      841 gagaatcccg cctgctgttt gtgcaccgac tgagtcacaa agatctccgg atcgttttcg
      901 ttaagttcta atagcagcgg cgagctatcc gccatcatcg ggataaactg ttcgtaaccg
      961 acccacgcgg aatcaaacag aatgtaatca cacagatgcc caacggtatc gatcacctga
     1021 cgggcgttat agacagttcc gtcataggtt cccagctgaa taatcgccag gcgaaacggg
     1081 cgcggcagct cggctttttc tggcgcaacg tcgcgaattt gctggcgcag atactcttca
     1141 ttaaaacagt gcgcatcaat accgccaatg aaaccaaacg ggttgcgtga agcttccaga
     1201 tagaccggcg tcgcccccgc ctgaatcagc gcgccgtgat gattcgactt atggttgtta
     1261 cggtcgaaga gcaccagatc gccacgcgtt aacagcgcat tcgtcaccac tttattcgct
     1321 gccgatgtgc cgttcagcac aaaataggtt ttatcggcat gaaagacttt ggctgcgaat
     1381 ttctgcgcat ctttcgccaa taagcagatc gcccaatttt acgtcagcgt tacacatatc
     1441 ggcgcgaaag acgttctcac caaagaaatc gtaaaaatgg cgtccggcag gatgcttttt
     1501 aaaaaacgca ccatgttgat gtccagggca agcaaaggtg ctgttgccca tctcaacgta
     1561 ctgcgtcagc gtgtcataaa acggtggcag caaattctct tcatactgac aggctgcgga
     1621 ttccagctcc agccactgct gctcgttgcc gttgattacc gccgtaacgc ccgcaggtaa
     1681 ttcaacagca tgttcggaat acaaaaacac cggtagatga aaaccggtgc gcttaagcaa
     1741 cgcaagaatg ccactgcgac tatccgcagc ggtaatgacg actgccacga cgtccgtaaa
     1801 atcagtatct cccaacgcca ccacgcgacg atgagaagaa agtcgggata ccagttcact
     1861 actggcggca atattcattg atttcataag cgcaaacccg tttcggggaa gtaagaatac
     1921 cggacaaggt ggaaaaccct gccccatgag atatgggtca aactggtcac cagctccgac
     1981 cgccagacat cagtaaaagc agaaacgctc tgattttact gttgtcctgc agtgagcgtg
     2041 cgttaacttc accgcatgag cagtaacata gaaagggaaa cgtttcgcgc gaaacggcga
     2101 taagcgagag aatgtaagga ggtggcgtgc atcgggcaaa ctccgtacag agaggagaaa
     2161 attcgcgcaa tcatggcacc tttcgctaaa gcgtgcaagc caggactttg cgaccagaca
     2221 agccatcaac aaggcaaaaa gttcataata agaaaatcaa acaatacagt taacaggaac
     2281 tcttgtggtc atcggccctt ttatcaacgc tagtgcagtc ttactgggtg gcgttctcgg
     2341 cgcactgctc agccaacgct taccggaacg tatccgcatc tccatgacat ctatttttgg
     2401 tctggcatcg ctggggattg gtattttact ggttgtgaaa tgcgccaacc ttccagcgat
     2461 ggttttagct acgctacttg gcgctctaat tggcgaaatt tgtttgctgg agaaaggtgt
     2521 caatacagca gtcgccaaag cacaaaatct gtttcgtcac tcacgtaaga agccaacgca
     2581 tgaatctttt attcagaatt atgtcgcgat tattgtcctg ttttgcgcca gcggcaccgg
     2641 gatcttcggg gcgatgaacg aagggatgac cggcgatccg agtattttaa tcgccaagtc
     2701 atttcttgat ttctttacgg cgatgatctt cgcctgctcg ctgggtattg cggtgtcggt
     2761 gattagtatc ccattactga tcatccagtt aacgctggcg tgggctgccg cgctgatatt
     2821 accgctgacc acaccgtcga tgatggcaga cttcagcgcc gtaggcggtt tattgctgct
     2881 ggcaaccgga ttacgcatct gtggcattaa aatgttcccg gtggtcaaca tgcttccagc
     2941 actccttctg gcaatgccgc tttccgccgc ctggtttgcc tgacaatgcg tgcaatagcg
     3001 gcaaagtgat gatagattgt gcagtctgca gtaaattgaa gaaatttgat tgacgagacg
     3061 aggcgaatca ggtttaatgc gccccgttgc ccggatagct cagtcggtag agcaggggat
     3121 tgaaaatccc cgtgtccttg gttcgattcc gagtccgggc accactaatt cttaagaacc
     3181 cgcccacaag gcgggttttt gcttttggat ctgacaataa ccttcacgaa aaaagtttgc
     3241 ttataaagtc tgggggaatt actctcgcca cgttaacgag agtaatttta ttgatactaa
     3301 tctcctgata ctttaccccc gtccaaactc cagccgctgg acattcacca tcccagtctt
     3361 ctcagcagca ctggcatcaa tttgtgtcac ccgcagcgca tacttttcat ccagcgcgtt
     3421 taaccagttc agcaggtcat taaacaccac cggatctatc cagacctgaa tattctcccc
     3481 acgctcggct atccgcttga tgactaccga gtgcgcggaa gcactgtcac tgataacccg
     3541 cgatacctgc gcaggcgttg ttgtggcgga ttttcgcgcc gcaataatat ccggcgcggc
     3601 gctcctcagt ctggtgttca tcgccaccag ttgctgcaac attgtctcct gttgtactat
     3661 ccgttcgctc aacggctgcc agatgaggac gtaatatccg acgctaaaca ggaacaccac
     3721 cgctgccagt aacatgccct tttcacgcgg agaacgcccc gccaggtgtt gtgccagcca
     3781 gtgttcgcca cggcttaact ggcgttcacg ccattgctga aaatagtgaa taaatttatc
     3841 gcgtaacatg ttatttcctc cgcaacgtta cgccgccgga aaccgcatca ccctctttct
     3901 gtaacgcgtc ctgttgcaca acataatcgg ttgccagtgc actacgcagt ttgtcgaaac
     3961 tggcaaagtt cgcggcccgt agctggaggt gaagtatctg gcgtttttga tcaaaggtaa
     4021 aaccacgcat ttcgatgtcg gaaagtgacg ctgatttcag ggtgctggct atcgctgaca
     4081 actcggcgag cagccgggta tcgtcggcct gtgggcgata ttttttcagc gccatcgtca
     4141 cctgagagcg taaattcaca atccgcttct gctccgggaa caacgttaag aactgttcct
     4201 ccgcctgggt gcggctttgc gccacctgtt cgctgacgct ccataacgtc acgccccgct
     4261 ccactgccag cgcaactaga atcagcaata tcggcagaat catcacccgc cagcgcgccc
     4321 actgttttcg gtagctgacg cgaggctgcc acggccctgt cagcaggttc ccttccggtt
     4381 cgccataagt ggtaacggcg ggcagagctg taacggtcag gcgttcagcg tctgcgccag
     4441 cccatgctga tagcttttcc ggtgcaatgc cgactacggt tagcgaaagc ggtaaatcct
     4501 gctcattgag ctgggcgcgg aacatgaccg gagccagcgc ccgcccggcg ctccatcccc
     4561 ggcattcatc aatgcggcag ataacccgtt gcgcatcgcc agccataacc ccacaaggaa
     4621 tggacatcca gtctggcgcg acggtagcgc gggtgatgcc gttttcctgc aaccactgcg
     4681 caatgttgcg catatgctgt tggtgaatca ctgctacggt tgccagttgc tggtcgatat
     4741 tcaacggggc gaaatgcagt tcatcgatat cctggttcag ctcttcttcc agtaaggcgg
     4801 gcagaatggt cggtatctgc ttacgggcga catcaggcag ttcaacctgc cagacgctga
     4861 tccattcgcc gggaatgtag agtcgaatcg catcggtttg cagccattgc tggagctgtt
     4921 cgttagcaac gtcagaccag ataccgtgct ccacatcggg tgtacggcgc tgccaatgga
     4981 tgggatcagc ggcgcaaagc gggaaaaaaa tctcaaggat ggaactcact cactttctcc
     5041 tgtctgatgc cagagaaccg aaaagtgttg tgggcccatg cggacaatta acgagttcat
     5101 cgtcagttca atctcattca cggtgatatc tgaacgcagc cagaagtaat tgctgtccac
     5161 gctcaggacg gtttttagct gttttttagt acgctcatcg acgtcagcaa gtagcggctg
     5221 tgcaagaaac tgatcgacat cttcccagcc cttcgccgga cgttgttgta ataacgcccg
     5281 cgcctgaacg gggcttaacc acgggtcaaa cagcgcctca agaatcacac tttgcgtgac
     5341 gtctaaagta ttgatgttga tttgctggcg gatcatcggc agcgcacaga ccagcggttt
     5401 cagtttttga taaagcccgg cgtccattcc ctgtaccacg cgcatctcac tgatatcagc
     5461 cagcggttga ttggcggcgt agaacggcac cgaacgggcg agatactcgc tgtcttcacg
     5521 gcccagacgt gtctgcacgc tgcggtcctc gtcaataaac tcccacaggc tttcggctat
     5581 cagttcggcc cgataagcag gcacatccag gcgcgagatc agggcaatca actgttgtac
     5641 cgcaagcgga cgcgacgccg ttgtcggctg agcaagggca ttcaggttaa agcaagcctg
     5701 tgcgtcacgc agggtgaccg caatttgccc ctgcggcaga gggaagaaac gagggccgga
     5761 tgcccacggc tgtgccagat gcacgcgctt ttcatttttc aggctcagac tgagcgcgct
     5821 cagcgccagg ctttccgcac tggcgctgta ccacagcgcc tgctggtact cctgctggct
     5881 gcgcgttcgc ccaagttgtt gctgcattcg cccggaaagc gtgatggtta ccagcatcat
     5941 aaccgccagc aataccagca ccacgaccag tgccattccg cgttttggtg gtgaggtgat
     6001 catgattatt gcggcccgcg taacaaccag atgcgttcaa tctcgcccca ttgcggcgaa
     6061 tgcagggtca tgcgtaccgc cacagggatc gcctgtactg acgaccagct ctcctgccag
     6121 cgcgtgccgt cgtagaactg caaacggagc gaatcggccg gaatcaactt ttgcattgtc
     6181 ggcttcacgc tgcctgcggc atcggtcagc ggccaggcta accgttcgag ataaccgtca
     6241 tgaatgcggt aaccgacggt gagcagattg ctgcgcggca gacgcatcaa cgggttaacc
     6301 acaccgccgc gcacaaaacg cattccttca ctctcagacg ccagcacgcc agcgccagcc
     6361 agtaaagctg gttcacgctg gccctgatcg cctcttaccg gacgcggcat catttgggtc
     6421 agatcgtggg tcagaaaact catcgtttgc tgcatgaggt ttagtttttg atcgtgatcg
     6481 gcgacggcgc tattcacgcg cgtgacgccg ttagtcacct gctgcgccat cagtgccagc
     6541 gaggcaaaaa tggcaattgc caccaacatt tccagtaacg tgaaaccagc gcgagtcctt
     6601 ctcactgttg gcctcccacg gcgctaaacc aggcgcgtcg tgactgaatc accgacgaaa
     6661 agtcttcgtg acggctgact tcaatatcca ccgcctggag cagcgcgttg cctgtattca
     6721 atgggattgt tcgccagtac cagcggcttc ctgccatatc gctctcgccc tgatgcctga
     6781 ccgcccgctg ctcacgggtc atcaggtaga gcagcgcagt ctggttttca gctacccagc
     6841 ccgctaccgt tttttcctca agaacgtgct gattactcag cgcaccgctg gcaatctgta
     6901 acaccgccgt ggcagccagc gcaaaaatcg ccagcacgag catcacttcc agcaaggtaa
     6961 atccgcgctt catggcatcc tctcatcaca ttgattgagg gataacgcgc catcgtgtgc
     7021 cagctttacc gctcaacatg cgttttgcgc cgccgagtag aagcgcagcg taaacggcgt
     7081 ggcgggttca aaaggcgaaa aacggatctg cggcgtcttc tttttcgcct ctttttgcaa
     7141 ctccagttca atatcgtgca gcgtcaggcg acgacgttgc agctccagcg catattcctt
     7201 ctgccagata tcacttccgg gttgtaacag catctgcacc tgtttcggca ccgtaacctg
     7261 tgccgataac cgggtcgcag aaacgggcaa ccactgcccc tgacgacgct gcataaactg
     7321 atagccaggc gggtcgatta gcacaccgag tgtctgtcct tcaatcactg ccctgtcctt
     7381 aaactgcgca aagcgagtca gaaaatcctg tgccgctttt ttcgcgggcg gttcagaatc
     7441 ggtcgcaaac gtctgtacca cgcccgcact ggcaaggccg ataaggaaaa tcaccagcat
     7501 gatttccaga agtgtgaatc cgcgttcagg cactgcttac tgaaactcct gcaaattcca
     7561 gttaccgata tctgcgccag cgccttcccc gttttcctga ccatccgccc ccagggtata
     7621 aacatcaaac agtccttttt cacccgggct gagatactga taatcattgc cccacggatc
     7681 ctttggcagt cgtttgatgt atccaccagt acggtagttg cgggagtccg ccatattggc
     7741 tggctgctgg atcagcgctt ccagcccctg ttctgtggtc ggataacgcc cgttatccag
     7801 tcggtacata tctagtgcgt tttccagcgc cacgatatcg ctgatggctt tttgccgatt
     7861 ggctttctct ttgttgccca acaggttagg caccaccgtc cttgccagga cgccaagaat
     7921 aacaatcacc accatcactt ccagcagggt aaaacctgcc cgtggtttgt gtgtgcggga
     7981 taacgaattc atgtgataac tccgtaaatt acattccaac catattattc agttgcagca
     8041 tcggctcgag gatggcgatg acaataaaca gcaccacgcc cgccatcatc accaccagcg
     8101 caggctcaaa cagccccaac gccagcccca cctgggtatc aaattcccgt tcctggttaa
     8161 cagcggcctg ctcaagcatg gtttccagtt cgcctctctg ttcgccggaa gcgataatgt
     8221 acagcatcat cggcgggaac aggcgcaact ccgccagcgc ggcgcgcaga ctgcttcctt
     8281 cgcggacgcg atctgccgcc agcagcagtt gttgttcgac atagcgattt gccgacacgg
     8341 cggcagcggt ctgaatgcct tccagtagcg gaacactgct ggcggtgagg atgcttaatg
     8401 tgcgggaaaa acgcgccgta ttcagcccgc gcgcaacacg gcccgtcacg ggcagacgca
     8461 gcaaggtttt atcccagcgc aggcgcatag taggattttt aagtagccat tgccccagca
     8521 ccagaagcgc cagcaatccc gccagccagt aaacgccgct ggcctgtaac gcatcactca
     8581 tagcgataag cgcacgggtg gaggagggta gcgcgtgtcc gagatgatca aactgttcga
     8641 tgattttcgg caccactgcc gtcagcaaaa tagtgaccac gcccgttgcc accaccagca
     8701 taaccagcgg atagagcatg gcctgcaata gacgtgattt caggcgctgt cgctgttcgg
     8761 tgtaatctgc caggcgattg agcaccacgt cgagatgccc ggatttttct ccggcagcga
     8821 ccatcgaaca aaacagggaa tcaaagacgc ggggatgttc gcgcaggctg tccgacaggg
     8881 tataaccttc ctgaatccgg ctgcgcagcg ccattccgag gctcttcaca tgcagttttt
     8941 cactttgctc actgaccgcc tgcaagcagg tttccaacgg cattgctgcc tgcaccagcg
     9001 ttgccagttg gcgcgtgaac agcgccagat ctgccgccgc cacgcgacga tgtgcgtgcc
     9061 gccgacgctg caacattccc cctgccgatg cattcatcct ggcttcaatg tgcacgggga
     9121 taagctcttt accgcgcaac aactggcggg catgacgcgc ggaatccgcc tcaatcatgc
     9181 ctttggtttt gcgaccatta cgctccagcg cctgatagta aaacagtgcc attacgcctc
     9241 catggttacc cgcagaactt catcgagaga ggtttctccg gcgagcactt tctcaatgcc
     9301 gttgctgcgg atacccgcag agtgttgccg gacataacgt tccagctcca gctccccggc
     9361 ctgacggtgg atcaaatcac gcaatgtggc atccaccacg tcagctcatg gatggcagtc
     9421 cgtccgcgga aacctttgtg attacaggcg gggcagccct gcggatggta cagagtgacg
     9481 gttcgcgcat cggtaatgcc cagcaggcgt ttttcttcgt cagtggcagg cgcggcctga
     9541 cggcagtcgg gacacagcgt gcggaccagt cgctgcgcca tcacgcccgt cagactggaa
     9601 gagagcagga aaggctccac gcccatatcc tgcaaacgcg tgatcgcccc caccgctgtg
     9661 ttggtatgca gcgtggaaag gaccaggtgt ccggtaagcg atgcctgaac agcgatttct
     9721 gcggtttcgg tatcgcggat ttcaccgacc atcaccacat ccgggtcctg acgcaaaatc
     9781 gcgcgcaggc cacgggcgaa ggtcatgccg acgcgggtgt taacctgtgt ctgaccgatc
     9841 ccttcaatca tgtattcgat ggggtcttca accgtgagaa tgttacgcga atggttgttc
     9901 agctcctgca atccggcgta cagcgtggtg cttttgccgg aacccgtcgg ccccgtcacc
     9961 agaaagatgc cgtgcggttt gtgtaacagc tggcgcaact gcacggtcag ttgctggcta
    10021 agccccagac gctccagcgt caggcgggcc tggtttttgt ccagcagtcg cagcaccacg
    10081 cgctcgcccc aggcagaagg catggtggag acacgcacgt caatcgcccg gccgcccagc
    10141 agcagcgcaa tacgtccatc ctgcggtacg cgcttttcgg cgatatccag ccgtgccatc
    10201 accttgatac gcgataccag cagcgaggcc agtttgcgcc ccgggcgcag catttcatgt
    10261 aatgtgccgt caacgcgaaa acggatcacc agactctttt caaacgtctc gatgtggata
    10321 tccgaagcgc cttctttaat cgcctctgcc agcatggcgt tgatcagttt gatgatcggc
    10381 gcatcgtcgt cactttccag cagatcttcc gtttctggca gttcttccgc gagagtaaaa
    10441 aagtcctcag cagaaccgag atcttccatc agctggcgag cctcggaaga gtcccgctgc
    10501 cagaccgcat tcagccgctg ttcaaattcg gcctcgtcga tttgccgcag cgtaaagggc
    10561 gcgttcagcc cccgctgcag ctcctgcaaa acagagagcg atagcggatg aacgtggagg
    10621 atctccagcg acgcttcgca ccatgccacc aggctaaacc gacggctgaa actgtagggc
    10681 agacgcacgg tcttggcggt ggtttcctgt gctacaggca ccattaacgc gttctcccgg
    10741 cattgaggaa cgcgcgaact tccggcggta aggcctggtt ttgcgctggc agtaccggct
    10801 gtgcggtgtg cggcatcagg cttaaacctt gctcatcacg atagatctgt tcggcgcgca
    10861 tatagttata tttgcgctgc gacacgccgt ctgccgccat accgtcatgc agaatggtcg
    10921 ggcggataaa caccatcagg ttacgttttt cttttttatc cgccgtcgat ttaaacaggt
    10981 taccaatcaa tgggatatcg cccagcagag gcactttcgc cacgctttct cccgcctgat
    11041 cgtccatcag accaccaagc acaatcagct caccatcgtt agccagcacg gtggttttca
    11101 gtttgcgctc accaaacacc acgtcgaggc tggtctgtcc ttccaccttc gagacttcct
    11161 gctcaatcac catctgtacc gcgttacctt cgttaatctg cggcgtgact ttcagcatga
    11221 tgccgacttt tttcctttct actgtattga aaggattgct gttattggag ccaacggtag
    11281 agccggttaa taccggaacg tcctagccca ccatgaagaa ggcttcctgg ttgtccagcg
    11341 tagtgatgct cggcgtggag agaacgttcg agctggagtc gtttttaacc gcctgcacca
    11401 gtgccatcca gtcgcctttc accacgccaa ccgccgtacc gctaaatcca gaaagaagct
    11461 gggcgagtgt ggagagatcg ccgttggtat ccggattaat ggtggtagcg ccgttttcac
    11521 tgatcaccgt cgagcctttc tgcggtttcg cctgagaaat ggctgccccc agcgtaccga
    11581 tagggatctg cgtaccatta gcaaactgca ttaatccggc atctttcgat gcccactgca
    11641 cgccgaagtt gatattgcta ccttcggcaa cttccacgat caacgcctcg acgtgcacct
    11701 gagcacggcg aatatccagt tgttcaatta cgctttgcag cgactgcatg atgtcctgcg
    11761 gcgcggttac aatcagggca ttactgtgtt tgctggcggc gatggataca acctcacgcc
    11821 cgctaccgac cgtgccttcc gcctcttctt tagccgccgt gagcgtgccg ctgacctgtt
    11881 tcagcacatc gaccagatct tcggctttgc tgtatttgag atagaaaacc tggctgttgc
    11941 cgctgcgttc catttctgag tccagccgac ggatcaggcg gcgcattttg tcccgcgtgg
    12001 ccgggtcacc actgacaatc acactgttgg tgcgttcgtc ggcgacaatt tgagatttca
    12061 gcgtcgcagg ctggttctcg ccgctgtttt tcgtcaggct ttccagcacg cgggcgattt
    12121 ccgaagccga ggcgttatcc agcgggatca cctcttcggt gcgattaccc gcgtgatcca
    12181 cgcgctggat cacttccgtc aggcgctcca caacggaggc gcgtccggtg agcataatca
    12241 cgttggaggg atcgtaatta acaacgttgc ctgagcctgc gctgtcgatc atctggcgca
    12301 gaatcggtgc cagctcgcgt accgacacat tacgtaccgg cactactttg gtgaccattt
    12361 catcgcccgc gtagttgtcg ctgccttcac cgaccagcgg cagcggctcg actttcgcag
    12421 cgctggattt caccaccttc agcacgtcgt tttccatcgg tacgacggca tacccctgtg
    12481 cttccagcag gttaaggaat agctggtaat actggcgttc attgagcggg gtcatggtgc
    12541 gaatactcac tttcccctgt acgcccggcc ccataatgat ggttttatta aggttagcgc
    12601 cgacggtttc gatgaacgat ttcaggtcgg tatctttaaa attagcggtg aaagtggctt
    12661 cttccgccca gaccggtgaa ctgcataatg ccgctgccag caccagcggc agtaaacgct
    12721 tttttgtttt gaggccagtt gtcttcttac gccagaccga caaggtaata tcacgccaaa
    12781 acacgatgaa tgattctcct ggattaaatg cggttagcgc agcgcgatgg aaatgtcgtg
    12841 gcgcgcaccc ttgcgtaaaa ccgtaagttg aatggaatcc attgaaggta actgccgcat
    12901 cagagcaatc attgctcgtg gatcagtgaa atcctgctga tttagcgcaa tggcgatatc
    12961 gccttccttg aaaccgctgg catcgaacag agaacgatct gcccccggct tcactgcata
    13021 accgacaatt ccctccttac gcacaggcgt aagctggata tagttaaaaa ttttctgcgg
    13081 atctttcgcc agtgcctgac gcacggcagt cggtatctca actggcgcac tgacagcagg
    13141 ttcagcaaca gcttgctttg cttcgtcact gacagctttt ttgttggtcg cggcaacggt
    13201 ggaacgctcc tcttcagcca ggctcaggcg ctctattttt ccctgatagc gcagcatcac
    13261 atggtcgcga ttgatttcct caatcaccgc gttgtgcgag ccaagcgttt caccctgcaa
    13321 atagacctgc tgtttaccgc cttcttcaat aaccgcgccg ggtctggcac caaaggcgat
    13381 cccgcgcgca ccacattaag acgcgtttct gccacaggca caggttcggg ttgttttacc
    13441 ggcgtggcga cgggctgata tttgccaaac cagttttgct ggctgattaa ttgcacgtca
    13501 tttttatcga acgtttttgc atccgcacgg ggcggtttat tcgccgatgg ggaaacagcc
    13561 gtatattccg cagaaaagga gaaatagcgc cagagtgaat gcgccacttt tgcagaaata
    13621 ataagcagca tcagccagaa catcccgcgt acaatttt
//
LOCUS       DADMIB010000110        13587 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.110, whole genome shotgun sequence.
ACCESSION   DADMIB010000110 DADMIB010000000
VERSION     DADMIB010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13587
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.110"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            307..642
                     /locus_tag="JNZ89_002975"
     CDS             307..642
                     /locus_tag="JNZ89_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004856597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phnA family protein"
                     /protein_id="HAY8936773.1"
                     /translation="MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDTEPAQESDELIV
                     KDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMK
                     LKSEFVKKN"
     gene            802..1245
                     /gene="yjdN"
                     /locus_tag="JNZ89_002976"
     CDS             802..1245
                     /gene="yjdN"
                     /locus_tag="JNZ89_002976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family metalloprotein YjdN"
                     /protein_id="HAY8936774.1"
                     /translation="MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDS
                     AENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRW
                     FDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ"
     gene            1378..2166
                     /gene="phnC"
                     /locus_tag="JNZ89_002977"
     CDS             1378..2166
                     /gene="phnC"
                     /locus_tag="JNZ89_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HAY8936775.1"
                     /translation="MQTIIRVEKLAKTFNQHQALHAVDLNIHHSEMVALLGPSGSGKS
                     TLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLS
                     VLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQR
                     VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALR
                     YCERIVALRQGHVFYDGSSQQFDNERFDHLYRSINRIEENAKAA"
     gene            2191..3207
                     /gene="phnD"
                     /locus_tag="JNZ89_002978"
                     /pseudo
     CDS             2191..3207
                     /gene="phnD"
                     /locus_tag="JNZ89_002978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418529.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter substrate-binding
                     protein"
     gene            3333..4112
                     /gene="phnE"
                     /locus_tag="JNZ89_002979"
     CDS             3333..4112
                     /gene="phnE"
                     /locus_tag="JNZ89_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313113.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HAY8936776.1"
                     /translation="MQTITIAPPKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDG
                     GNMATFVADFFPPDFSQWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWW
                     VYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAI
                     EPGPVEGIRATGANKLEEILYGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIG
                     VTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLRKHFI"
     gene            4133..4857
                     /gene="phnF"
                     /locus_tag="JNZ89_002980"
                     /pseudo
     CDS             4133..4857
                     /gene="phnF"
                     /locus_tag="JNZ89_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313112.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
     gene            4858..5310
                     /gene="phnG"
                     /locus_tag="JNZ89_002981"
     CDS             4858..5310
                     /gene="phnG"
                     /locus_tag="JNZ89_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HAY8936777.1"
                     /translation="MHADIATRQHWMSMLAHSQPAELAARLNALNITANYEVIRTAET
                     GLVQIQPRMGGTGERFFAGDATLTRAAVRLTDGPLGYSWVLGRDKQHAERCALIDALM
                     QQSRHFQNLSETLIAPLDADRMARIAARQAEVNASRVDFFTMVRGDNA"
     gene            5307..5891
                     /gene="phnH"
                     /locus_tag="JNZ89_002982"
     CDS             5307..5891
                     /gene="phnH"
                     /locus_tag="JNZ89_002982"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HAY8936778.1"
                     /translation="MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPL
                     NIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFHTNAPLVNQSELATFAVTDEAIS
                     SEQLNALSSGTAVAPEAGATLILQVVSLSGGRMLRLTGAGIAEERMIAPQLPECILHE
                     LTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC"
     gene            5891..6949
                     /gene="phnI"
                     /locus_tag="JNZ89_002983"
     CDS             5891..6949
                     /gene="phnI"
                     /locus_tag="JNZ89_002983"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate synthase subunit PhnI"
                     /protein_id="HAY8936779.1"
                     /translation="MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLA
                     VDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLE
                     RRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLA
                     RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRN
                     HPFAGEIRSGYIDVSIMPEELGFAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLV
                     FGMSERKAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVD
                     FQAELELLKRLQQEQNHG"
     gene            6942..7787
                     /gene="phnJ"
                     /locus_tag="JNZ89_002984"
     CDS             6942..7787
                     /gene="phnJ"
                     /locus_tag="JNZ89_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HAY8936780.1"
                     /translation="MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPM
                     PYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDAT
                     LIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED
                     IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPP
                     FTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQS
                     EAKNQ"
     gene            7784..8542
                     /gene="phnK"
                     /locus_tag="JNZ89_002985"
     CDS             7784..8542
                     /gene="phnK"
                     /locus_tag="JNZ89_002985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HAY8936781.1"
                     /translation="MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGK
                     TTLLKSISARLTPQQGEIHYESRSLYAMSEADRRRLLRTEGGVVHQHPLDGLRRQVSA
                     GGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNL
                     VTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLV
                     MKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN"
     gene            8653..9333
                     /gene="phnL"
                     /locus_tag="JNZ89_002986"
     CDS             8653..9333
                     /gene="phnL"
                     /locus_tag="JNZ89_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HAY8936782.1"
                     /translation="MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSG
                     SGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWESQFLRVI
                     PRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI
                     ARGFIVDYPILLLDEPTASLDAKNSAAVVELIHEAKARGAAIVGIFHDEAVRNDVADR
                     LHPMGASS"
     gene            9330..10466
                     /gene="phnM"
                     /locus_tag="JNZ89_002987"
     CDS             9330..10466
                     /gene="phnM"
                     /locus_tag="JNZ89_002987"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HAY8936783.1"
                     /translation="MIINNVKLVLENEVVHGSLEVQDGEIRAFAESQSRLPEAMDGEG
                     GWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLNAVAIGDVR
                     DGGDQLENLEKMINTIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLV
                     SLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAAL
                     CRARQIALASHDDATHAHVAESHQLGSVIAEFTTTFEAAEASRKHGMNVLMGAPNIVR
                     GGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDESNRFTLPQAVRLVTKN
                     PAQALNLQDRGVIGEGKRADLVLAHRQGNHIHIDHVWRQGKRVF"
     gene            10466..11023
                     /gene="phnN"
                     /locus_tag="JNZ89_002988"
     CDS             10466..11023
                     /gene="phnN"
                     /locus_tag="JNZ89_002988"
                     /EC_number="2.7.4.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 1,5-bisphosphokinase"
                     /protein_id="HAY8936784.1"
                     /translation="MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASA
                     GSENHIALSEREFFTRAGQNLLALSWHANGLYYGVGIEIDLWLHAGFDVVVNGSRAHL
                     PQARARYQSALLPVCLQVSPEILRQRLKNRGRENTSEINARLARAARYTPQDCHTLNN
                     DGSLRQSVDTLLTLIHQKEKHHACL"
     gene            11010..11459
                     /gene="phnO"
                     /locus_tag="JNZ89_002989"
     CDS             11010..11459
                     /gene="phnO"
                     /locus_tag="JNZ89_002989"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoalkylphosphonate N-acetyltransferase"
                     /protein_id="HAY8936785.1"
                     /translation="MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRD
                     PSMRYPSMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQACGLNVSSKL
                     LAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL"
     gene            11461..12219
                     /gene="phnP"
                     /locus_tag="JNZ89_002990"
     CDS             11461..12219
                     /gene="phnP"
                     /locus_tag="JNZ89_002990"
                     /EC_number="3.1.4.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism protein PhnP"
                     /protein_id="HAY8936786.1"
                     /translation="MSLTLTLTGTGGAQGVPAWGCECVACARARRSPQYRRQPCSGVV
                     KFNDAITLIDAGLHDLADRWPPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPP
                     DEQGCDDLFKHPGLLDFSHTVEPFVVFDLLGLQVTPLPLNHSKLTFGYLLETAHSRVA
                     WLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRSHCDLNTVLALNQVIRSPRV
                     ILTHISHQFDAWLMENALPSGFEAGFDGMEIGVA"
     gene            complement(12366..12695)
                     /gene="yjdP"
                     /locus_tag="JNZ89_002991"
     CDS             complement(12366..12695)
                     /gene="yjdP"
                     /locus_tag="JNZ89_002991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YjdP"
                     /protein_id="HAY8936787.1"
                     /translation="MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDR
                     GRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERR
                     MEDEYGR"
     gene            complement(12764..13081)
                     /locus_tag="JNZ89_002992"
     CDS             complement(12764..13081)
                     /locus_tag="JNZ89_002992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase"
                     /protein_id="HAY8936788.1"
                     /translation="MQPVFLFKKRTGAMGGHVAGTAGFCVAVPAFYSWSMSEVIDKDT
                     RSSERTDYPHYASEVALAFGSRVVGLELAKMIVDAWLGAQYEGGRHQQRVEAITAIEQ
                     RRN"
     gene            13334..>13587
                     /locus_tag="JNZ89_002993"
     CDS             13334..>13587
                     /locus_tag="JNZ89_002993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936789.1"
                     /translation="MNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVN
                     QNYAKSLPFSDRQDFDDAQRGFIAPLLDEGILRDANGKPY"
BASE COUNT         3058 a         4028 c         3746 g         2755 t
ORIGIN      
        1 attttatatt tagtgtgttg ttttttatca gaataaataa cgtcttctga tgcgtttaaa
       61 acgtcagaaa gataaaaata tcatgtgaat aaaaaaagaa caggtagagc attaacatta
      121 tcttaaataa taaatagagg caaaaagatt attttctttt tgcgtttcct ttcaaatgaa
      181 aacgatcgtc gtctaaaatc agcagtaccc ccgacaaact cagggatttt gtgtataatt
      241 gcggcctttt tcggcaatct gccgtttttt ggcgcttttg ccctgctgac ttttgaggaa
      301 atccacatgt cattaccaca ctgcccaaaa tgcaactccg aatacactta cgaagataac
      361 ggcatgtaca tctgcccgga atgtgcctac gaatggaacg acacagaacc tgcacaggaa
      421 agcgacgagc tgatcgttaa agatgctaac ggcaatctgc tggctgacgg cgacagcgtt
      481 accatcatta aagatctgaa ggtgaaaggt agctcttcga tgctgaaaat tggcaccaaa
      541 gtgaaaaaca tccgcctggt tgaaggcgac cataacatcg attgcaaaat cgacggtttt
      601 ggtccgatga aactgaaatc tgagtttgtg aaaaagaact gattgtattg tgatcggtaa
      661 gccggataag gcgctcgcgc cacatccggc aacgatgccg actgcctgat gcgacgctga
      721 ccgcgcctta tcaggcttcc ctctcatctg tataaatttc gaactacact taactggctt
      781 ctcttaactg aggtcaccat catgccgtta agtccctacc tctcttttgc cggtaactgt
      841 tccgacgcga ttgcctatta tcaacgtacg ttgggcgcgg aactgctcta taaaatcagc
      901 ttcggcgaaa tgccaaaatc agcgcaggac agcgccgaga actgcccttc cggaatgcaa
      961 tttcccgata ccgccatcgc ccacgccaac gtgcgcattg ccggaagcga catcatgatg
     1021 agcgatgcta taccgtcagg aaaagccagc tactccggct ttacgctggt gctcgattcg
     1081 caacaggtcg aagaaggaaa acgctggttt gataaccttg ccgctaacgg aaaaattgaa
     1141 atggcctggc aggaaacttt ctgggcgcat ggcttcggca aagtcaccga taaatttggc
     1201 gtaccgtgga tgattaatgt cgtcaaacaa caaccaacgc aataacccgc cgggaggccc
     1261 gccctcccgc actgtcatcg aattcccgtt aactcttcat ctgttagtca cttttaatta
     1321 accaaatcgt cacaataatc cgccacgatg gagccacttt tttagggagg ctgcatcatg
     1381 caaacgatta tccgtgtcga gaagctcgcc aaaaccttca atcagcatca agcgctgcat
     1441 gcggttgatc tgaacattca tcacagtgaa atggtggctc tgcttgggcc gtcgggttcc
     1501 ggcaaatcca cacttttacg tcacttaagc ggtttgatta ccggcgataa atccgccggc
     1561 agccatatcg agctgctggg ccgcacagtc cagcgcgaag gccgtctggc gcgcgatatc
     1621 cgcaaaagcc gcgcccatac cggctacatc ttccaacaat tcaacctggt gaatcgcctg
     1681 agcgtactgg agaacgtgct gattggcgcg ctcggcagca cgccgttctg gcgcacctgt
     1741 tttagctggt tcacccgcga gcagaaacaa cgcgcgttac aggcgctgac ccgcgttggc
     1801 atggtgcatt ttgcccatca acgcgtttcc accctctccg gcggacagca gcagcgtgtg
     1861 gcgattgccc gcgcgctgat gcagcaggcg aaggtgattc tggccgatga acccatcgcc
     1921 tcgctggacc cggaatccgc ccgcatcgtg atggacaccc tgcgcgacat caatcagaac
     1981 gacggcatca ccgtagtcgt cacgctgcat caggtggatt acgccctgcg ctactgcgaa
     2041 cgcatcgtcg ccctgcgcca ggggcacgtt ttctacgacg gcagcagcca acagtttgat
     2101 aacgaacgtt ttgaccatct ctaccgcagc attaatcgca tcgaagagaa cgcgaaagct
     2161 gcctgacatc cccatcattg aggaaaacga atgaacgcta agataattgc ctcgctggcc
     2221 ttcaccagca tgttcagcct cagcaccctg ttaagcccgg cacacgccga agagcaggaa
     2281 aaggcgctga atttcggcat tatttcaacg gaatcacagc aaaacctgaa accgcaatag
     2341 acgccattct tacaggatat ggagaagaag ctgggcgtga aggtgaacgc cttctttgcc
     2401 ccagactacg caggcattat ccagggaatg cgcttcaata aagtggatat cgcctggtac
     2461 ggcaacctgt cggcaatgga agcggtggat cgcgccaacg gccaggtctt cgcccagacg
     2521 gtcgcggcgg atggatcgcc aggttactgg agcgtgttga tcgtcaacaa agatagtccg
     2581 atcaacaacc tgaacgatct gctggcgaag cggaaagatc tcaccttcgg caatggcgat
     2641 cctaactcca cctctggctt cctcgtcccc ggttactacg tctttgccaa aaacaatatc
     2701 tccgccagcg actttaagcg caccgtcaac gctgggcatg aaaccaacgc gctggccgtc
     2761 gccaacaagc aggtggatgt tgccaccaac aacaccgaaa acctcgacaa gctgaaaacc
     2821 tccgcgccag agaagctgaa agaactgaag gtgatctgga agtcgccgct gatcccaggc
     2881 gatccgatcg tctggcgcaa gaatctctcc gaaaccacca aagacaagat ctacgacttc
     2941 tttatgaact acggaaaaac gccggaagag aaagcggtgc tggaacgcct gggctgggcc
     3001 ccgttccgcg cctccagcga cctgcaactg gtgccgattc gccagctcgc actgtttaaa
     3061 gagatgcagg gcgtaaaaag caataaagga ctgaatgagc aggacaagct ggcgaaaacc
     3121 accgagattc aggcgcagct ggatgacttg gaccgcctga acaacgcgtt aagcgcgatg
     3181 agttcggtga gtaaagcggt gcagtaatgt gctcgatcgg tcccctctcc cttgagggag
     3241 agggttaggg tgagggggaa atgcgcacgc tgatgccctc atcccggccc tctcccacag
     3301 ggagagggag aaaacattaa acggagccaa acatgcaaac catcaccatc gccccaccca
     3361 agcgtagctg gttctcgctt ctgagctggg ccgttgttct cgccgtgctg gtcgtctcgt
     3421 ggcagggcgc ggaaatggcc ccgcttacgc tgattaaaga cggcggcaac atggcaacct
     3481 tcgttgccga cttcttcccg cccgatttca gccagtggca ggattacctc accgaaatgg
     3541 ccgtcacgct gcaaatcgcc gtctggggca ccgcgctggc agtggttctc tccatcccct
     3601 tcggtctgat gagcgccgaa aacctggtgc cgtggtgggt ttaccagccc gttcgccgcc
     3661 tgatggatgc ctgccgcgcc attaacgaaa tggtcttcgc catgctgttc gtggtcgccg
     3721 tcggtctcgg cccgttcgct ggcgtgctgg cgctatttat ccacaccacc ggcgtgctct
     3781 ccaagctgct ttccgaagcg gtggaagcga tcgaacccgg cccggtagaa ggcattcgcg
     3841 ccaccggcgc caacaagctg gaagagatcc tttacggcgt gctgccacag gtaatgccgc
     3901 tgctgatctc ctactccctc tatcgcttcg aatccaacgt ccgctcggcg accgtcgtcg
     3961 gcatggtcgg tgcaggcggg atcggcgtca ccctgtggga agcgattcgc ggttttcagt
     4021 tccaacaaac ctgcgccctg atggtgctta tcatcgtcac ggtcagcctg ctggatttcc
     4081 tctctcaacg gttgcgtaag cactttatct gataagcgag gcattgatat ctatgcactt
     4141 gtctacacat ccgaccagct acccaacacg ctatcaggag atagccgcaa aacttgagca
     4201 ggagcttcgt caacactatc gctgcggcga ctatcttccc gccgagcagc agctggcggc
     4261 gcgctttgag gtaaatcgcc acaccctgcg ccgcgccatc gaccaactgg tggaaaaagg
     4321 ctgggtacag cgccgtcagg gcgtcggcgt gctggtgctg atgcgcccgt tcgattaccc
     4381 gctcaacgcc caggcgcgtt ttagccagaa cctgctggat cagggcagcc atcccaccag
     4441 cgaaaaactg ctgtcggtgc tgcgcccggc atctggtcac gtcgctgacg cgctggggat
     4501 aaccgagggg agaacgtcat ccacctgcgc accctgcgcc gggtcaacgg catcgcgctc
     4561 tgtttaatcg accactactt tgcggacctc accctttggc cgacgctgca acgcttcgac
     4621 agcggctcgc tgcacgattt tctgcgcgag caaaccggga ttgcgctgcg ccgcagccag
     4681 acgcggatca gcgcccgccg cgcccaggcc aaagagtgcc agcgtcttga aatcccgaat
     4741 atgtcgccgc tgctgtgcgt gcgcaccctt aaccaccgtg acggtgaaag cagcccggcg
     4801 gagtactccg tcagcctgac gcgcgccgac atgattgaat tcactatgga gcactgaatg
     4861 cacgcagata tcgcgacccg ccagcactgg atgtccatgc tggcgcacag ccaaccggct
     4921 gaactggcag cccgcctgaa cgcgctgaac atcaccgcca actatgaagt gatccgcacc
     4981 gccgaaaccg gcctggtaca gattcagccg cgaatgggcg gtaccggcga acgctttttt
     5041 gccggcgacg ccacgctgac ccgcgccgcc gtacgcctga ctgacggccc cctcggctac
     5101 agctgggtgc tggggcgcga caaacagcac gccgaacgct gcgcgctgat tgacgcgttg
     5161 atgcagcaat ctcgccattt tcaaaactta tcagaaaccc ttattgcccc actggacgct
     5221 gaccgtatgg cacgcattgc cgcacgccag gccgaagtga acgccagccg ggtcgacttc
     5281 tttacgatgg ttcgcggaga caacgcatga ccctggaaac cgcttttatg cttcctgtgc
     5341 aggatgccca gcacagtttt cgtcgcctgt taaaggccat gagcgagccg ggcgtgattg
     5401 tcgccctgca tcagctcaaa cgcggctggc agccgctgaa tatcgccacc accagcgtgc
     5461 tgctgacgct ggctgataac gacacgccgg tgtggctttc cgcgccatta agtaacgata
     5521 tcgtcagcca gagcctgcgt tttcatacca acgcgccgct ggtcaatcag tcggaactgg
     5581 cgaccttcgc ggtaacggat gaggcgattt ccagcgaaca gctcaacgct ctttccagcg
     5641 gcaccgctgt tgcgccggaa gcgggcgcga cgctgatttt acaggtcgtc agcctgagcg
     5701 gcgggcgcat gctgcgcctt actggcgcgg gtattgccga agaacgaatg atcgctccgc
     5761 agctgccgga gtgcattctg cacgaactca ccgagcgccc gcacccgttc ccgctcggca
     5821 tcgacctgat cctgacctgc ggcgagcggc tgctggctat cccgcgaacc actcatgtgg
     5881 aggtgtgctg atgtacgttg ccgtgaaagg gggcgagaag gagatcgacg ccgcccacgc
     5941 cctgcaagag agccgacgcc ggggcaatac cgatttgcct gaactgagcg tcgcccagat
     6001 tgaacagcag cttaatcttg cagtagatcg cgtgatgacc gaaggcggca ttgccgaccg
     6061 cgaactggcg gcgctggcgc tgaaacaggc cagcggcgat aacgtcgaag cgattttcct
     6121 gctacgcgcc taccgcacca cgctggcgaa gctggcggta agcgagccac tcgacaccac
     6181 ggagatgcgt ctcgaacggc gtatttcagc ggtttataaa gatattcccg gcggtcagtt
     6241 gcttggccca acctacgact acacccatcg cctgctcgat ttcaccctgc tggcaaacgg
     6301 cgaagcgccg acgctgacca ccgcagacag cgaacaatcc ccgtcgccgc acgttttcag
     6361 cctgctggcg cgtcaggggc tggcgaagtt tgaagaggat agcggcgcac agccggatga
     6421 catcacccgc actccgccag tttacccctg ttcacgttct tcccgtttgc agcagttgat
     6481 gcgcggcgac gaaggctatt tgctggcgct ggcctactct acccagcgcg gttacggacg
     6541 caatcacccg ttcgcgggcg aaatccgcag tggttacatc gacgtgtcga ttatgccgga
     6601 agagctggga tttgcggtga acgtcggcga actgctgatg accgagtgtg aaatggtcaa
     6661 cggttttatt gacccgccgg atgagccgcc gcacttcacg cgcggctacg ggctggtgtt
     6721 cggcatgagc gagcgcaaag cgatggcgct ggttgaccgt gcgttgcagg ctccggagta
     6781 cggcgagcac gcgacaggcc cggcgcagga tgaagagttc gtgctggcac atgccgacaa
     6841 cgtcgaagcc gcaggctttg tctcgcacct caaactcccc cactacgtcg atttccaggc
     6901 cgaactggag ctactcaaac gtctgcaaca ggagcagaac catggctaat ctgagcggct
     6961 acaactttgc ctacctcgac gagcagacca aacgcatgat ccgccgcgcc atcttaaaag
     7021 cggtggcgat ccccggttat caggtgccgt ttggcgggcg cgagatgccg atgccctacg
     7081 gctggggaac cggcggcatt cagctcaccg ccagcgtgat tggcgaaagc gacgtgctga
     7141 aggtgattga ccagggcgca gacgacacca ccaacgccgt gtcgattcgc aacttcttta
     7201 agcgcgtgac cggggtaaac accactgaac gtacggacga tgcgacgctt atccagacgc
     7261 gccatcgcat ccccgaaacg ccgctgaccg aagatcagat cattatcttc caggtgccga
     7321 tccccgaacc gctgcgcttt atcgagccgc gcgaaacgga aacccgcacc atgcacgcgc
     7381 tggaagagta cggcgtgatg caggtgaaac tgtatgaaga tatcgcccgc ttcggtcata
     7441 tcgccactac ctacgcctat ccggtgaagg tgaacgggcg ctacgtgatg gacccgtcgc
     7501 cgatcccgaa attcgataac ccaaaaatgg acatgatgcc cgccctgcaa ctgttcggcg
     7561 cggggcgcga gaagcgcatc tatgcggtgc cgccgtttac ccgcgtggaa agtctcgatt
     7621 tcgacgatca cccgttcacc gttcagcagt gggatgagcc atgcgccatc tgcggatcga
     7681 cccacagcta tcttgatgaa gtggtgctgg atgacgccgg aaaccgcatg tttgtctgct
     7741 ccgataccga ttattgccgc caacagagcg aggcaaaaaa ccaatgaatc aaccgttact
     7801 ttcggtcaat aacctgaccc acctttacgc gccgggcaaa ggctttagcg atgtctcttt
     7861 tgatttatgg ccgggggaag tgctgggcat tgtcggggag tccggctccg gaaagaccac
     7921 gctgctgaaa tcaatctccg cgcgcctgac gccgcagcag ggggagattc actatgagag
     7981 ccgttcgctg tacgcaatga gcgaggccga ccgccgtcgc ctgctgcgca ccgaaggggg
     8041 cgtagtgcat cagcatccgc tcgacggcct gcgccgccag gtgtcggcag gcggcaatat
     8101 cggcgagcgg ctgatggcga ccggggcacg tcattacggc gatattcgtg ccaccgcgca
     8161 gaagtggctg gaagaggtgg aaattcccgc caaccggatc gacgacctgc cgaccacctt
     8221 ttccggcggc atgcagcaac gtttgcagat cgcccgcaac ctggtgacgc atccgaagct
     8281 ggtgtttatg gacgagccga ccggcggact ggatgtgtcg gtacaggcac gcctgctcga
     8341 cctgctgcgc ggcctggtgg tggagctgaa cctcgcggta gtgattgtca cccacgattt
     8401 aggcgtcgcc cgcctgctgg cggaccgttt gctggtgatg aagcaggggc aagtggtgga
     8461 gagtgggtta accgaccgcg tgctcgacga cccgcaccat ccgtatacac aactgctggt
     8521 gtcatcggtt ttgcagaatt gagccggtgc cggatgcggc gtaaacgcct tatccggcct
     8581 acaaatgcgc tccccgtagg tcggataaga cgcgtcagcg tcgcatccga cacccgaacc
     8641 acgaggcgaa aaatgattaa cgtacaaaac gtcagtaaaa ccttcatcct gcatcagcaa
     8701 aacggcgtac gcctgcccgt cttacaacgt gcctcgctca ccgtcaacgc aggcgaatgc
     8761 gtggtgctcc acggtcactc cggcagcggc aaatcaaccc tgctgcgctc gctgtacgcc
     8821 aactatctac ccgacgaagg tcaaatccag atcaaacacg gtgacgagtg ggtagacctg
     8881 gtcaccgcgc cagcgcgcaa agtggtggaa atccgcaaaa ccacagtcgg ctgggagagc
     8941 cagtttctgc gcgtcatccc gcgtatctca gcactggaag tggtgatgca gccgctgctc
     9001 gataccggcg ttccgcgtga agcctgcgcc gctaaagccg cgcgtcttct cacccgcctg
     9061 aacgtgccgg aacgcctgtg gcacctggca ccatcgacct tctccggcgg cgaacagcag
     9121 cgcgtcaaca tcgcccgcgg ctttatcgtc gactacccca ttctgctgct cgacgaacct
     9181 accgcctcgc tggacgccaa aaacagcgcc gcggtggtgg aactgattca cgaagccaaa
     9241 gcccgtggcg cagccatcgt cggcatcttc catgacgaag ctgtacgtaa tgacgtcgcc
     9301 gaccgcctgc acccaatggg agcctcttca tgattatcaa taacgttaag ctggtgctgg
     9361 aaaacgaggt ggtgcacggt tcgctggagg tgcaggatgg cgaaatccgc gcctttgccg
     9421 aaagccagag ccgcctgcca gaagcgatgg acggcgaagg tggctggcta ctacccggcc
     9481 tgattgagct gcataccgac aacctcgata aattcttcac cccgcgcccg aaagtcgact
     9541 ggcccgccca ttcggcgatg agcagccacg acgcgctgat ggtggcaagc ggcatcacca
     9601 ccgtgctgaa cgcggtggcg attggcgacg tgcgcgacgg cggcgatcag ctggagaatc
     9661 tggagaagat gatcaacacc atcgaagaga cgcagaaacg cggcgtcaac cgcgccgagc
     9721 accgtctgca cctgcgctgc gagctgccgc atcacaccac actgccgctg tttgaaaaac
     9781 tggttcagcg cgaaccggtg acgctggtgt cgctaatgga ccactcaccg ggccagcgcc
     9841 agttcgctaa ccgcgagaag tatcgcgaat attatcaggg caaatactcc ctcaccgatg
     9901 cgcagatgca gcagtacgaa gaagagcaat tggcgctcgc cgcacgctgg tcgcagccga
     9961 atcgcgaatc catcgccgcc ctgtgccgcg cgcgacaaat tgcgctcgcc agccacgatg
    10021 acgccacgca cgcccacgtt gccgaatccc accaacttgg cagcgtgatc gccgaattta
    10081 ccaccacgtt cgaagcggcg gaagcctcgc gtaagcatgg catgaacgtg ctgatgggtg
    10141 cgccaaatat cgtgcgtggc ggctcgcact ccggcaatgt ggcggccagt gaactggcgc
    10201 agcttggtct gctggatatc ctctcttccg actactaccc cgccagcctg ctggatgcgg
    10261 cgttccgcgt cgccgatgac gagagcaacc gctttacgct accgcaggcg gtgaggctgg
    10321 tgaccaaaaa tccggcgcag gcgctgaatc ttcaggatcg cggggtgatt ggcgagggta
    10381 aacgcgctga cctggtgctg gcgcatcgcc agggcaatca cattcatatc gaccacgtct
    10441 ggcgtcaggg taaaagggtg ttctgatgat gggaaaactg atttggttaa tggggccgtc
    10501 cggctccggg aaagacagcc tgctggcgga actccgcctg cgggaacaaa cgcagttact
    10561 ggtggcgcat cgctacatca cgcgcgacgc cagcgccgga agtgaaaacc atatcgccct
    10621 gagtgagcgg gagtttttta cccgcgcggg gcaaaacctg ctggccttaa gctggcacgc
    10681 taacggtctg tattatggcg tcggcatcga gattgacctc tggctgcacg ctggattcga
    10741 cgtagtcgtc aacggttcac gcgcgcattt gccgcaggca cgggcgcgct atcaatcggc
    10801 gctgctgccc gtctgtttac aggtttcgcc ggagatcctg cgccagcgcc tgaaaaaccg
    10861 tggccgtgaa aacaccagtg aaattaacgc ccggctggcg cgcgccgccc gctatactcc
    10921 acaggattgc catacgctca acaatgacgg cagcctgcgc cagtcggtcg acacactgct
    10981 gacgctgatt catcagaagg agaaacacca tgcctgcttg tgagcttcgc ccggccacgc
    11041 agtacgatac cgacgcggtt tacgcgctga tttgtgagct aaaacaggcg gagtttgacc
    11101 accacgcgtt tcgcgtgggc tttaacgcca acctgcgcga cccgagcatg cgctacccga
    11161 gcatgcgcta ccatctggcg ctgctggatg gcgaagttgt cggcatgatc ggcctgcatt
    11221 tgcagtttca tctgcatcat gtcaactgga tcggcgaaat tcaggaactg gtggtgatgc
    11281 cgcaggcgtg cggtctgaac gtcagcagta agttactggc gtgggcagaa gaagaagccc
    11341 gccaggccgg ggccgaaatg accgaacttt ccaccaacgt gaagcgccac gacgcgcacc
    11401 gtttttacct gcgtgaaggc tacgagcaga gccacttccg cttcaccaag gcgctgtaac
    11461 atgagcctga ccctcacgct caccggcacc ggcggcgcac agggcgttcc ggcatggggc
    11521 tgcgagtgcg tagcctgcgc cagagcgcgg cgctcaccgc agtatcgccg ccagccatgc
    11581 agcggcgtag tgaagtttaa cgacgcaatc accctgatcg acgccgggct gcacgatctc
    11641 gccgatcgct ggccgcccgg atcgttccag cagtttttgc tgacgcacta ccatatggat
    11701 cacgtgcagg ggctattccc gctgcgctgg ggcgtgggcg atccgatccc ggtttacggc
    11761 ccgccggatg aacagggctg cgacgatctg tttaaacatc cgggcctgct tgatttcagc
    11821 cacacggtgg aaccgtttgt ggtgtttgat ttgctggggt tacaggtcac gcccctgccg
    11881 ctcaaccact caaaactgac cttcggttat ctgctggaaa cggcacacag ccgggtggcg
    11941 tggctgtctg acaccgcagg cttgccggaa aaaacgctga aatttttacg caataatcag
    12001 ccgcaggtaa tggtgattga ttgcagccac ccgccgcgcg aggatgcgcc acgtagtcac
    12061 tgtgatttaa acaccgtgct ggcgctgaat caggttatcc gctcgccacg ggtgattctg
    12121 acccatatca gccaccagtt tgatgcgtgg ctgatggaaa acgcactgcc gtcggggttt
    12181 gaggcgggat ttgatgggat ggagattggg gtggcgtgat gagagggaat gtgcgcgctg
    12241 gccccctcac cctaaccctc tccccagagg ggcgagggga ccgattgtgc tcgatattga
    12301 atattgcgct ggttttctcc ctctccccat tggggtgagg ggcgatgcct gctccatacc
    12361 caacctcatc gcccatactc atcttccatt ctccgctctt catcttctag ctgccgacgc
    12421 tcctgatcaa gctggcgctg gcgatcgtcc agctgcctgc ggcgatcttc aaactggcgg
    12481 cggcggtcgt catattgtct gcgccgatcg tcgctcactt cacgctgcca gccgtcgtcg
    12541 cgcgaatctt catagtctcg cccacggtca gggttataag cgtcgttaat cgcctgctga
    12601 atattgccaa tggtgtcgtc gataatatcg gcctgggccg gaacggtgga cagcgtgagc
    12661 agggtgaata aaagaaatag cggaaagcgt ttcattagcc aacctcaaaa agaaactcta
    12721 tccacattaa tcattactca tccatgcaag tagtggatga atctcaattt ctccgctgct
    12781 ctattgccgt aatcgcctcc acgcgttgtt gatgacgacc gccttcgtac tgtgcgccca
    12841 gccacgcatc cacaatcatt tttgccagtt cgaggccaac cactcgtgaa ccaaaagcca
    12901 gtgcaacttc actggcataa tgcggataat cagtgcgctc tgacgacctg gtgtctttat
    12961 caatcacctc actcattgac catgaataaa aggctggcac agcaacgcag aatcctgcgg
    13021 tgccagcgac atgaccgccc attgctccgg tacgtttttt aaaaagaaac accggttgca
    13081 ttgataaatt gtgctcagta tttgccgaag tacaatatat ataataaata tataaaacac
    13141 ctcatattat ttacagagat aataaattcg cgtaattttc tctcttcagc acaaatgcct
    13201 aataaaatgg atcgttcagc tcacacttcc acttattaaa gtcgcaaatt cccaattatg
    13261 ataaccccag ctttaaatga cgtattttgt atggattaca tatttacgac ataaatgata
    13321 aatggagatt tatatgaata actctcggtt attccgtttg agcagaattg ttattgcgtt
    13381 aactgccgcc agcggcatga tggtaaatac cgctaacgcg aaagaggaag cgaaagccgc
    13441 cactcaatat acccaacagg ttaatcagaa ttacgccaaa tcattaccgt ttagcgatcg
    13501 tcaggatttt gacgacgctc agcgtggatt tatcgctccg ctgctggatg aaggtattct
    13561 gcgcgatgct aatggcaaac catatta
//
LOCUS       DADMIB010000111        13584 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.111, whole genome shotgun sequence.
ACCESSION   DADMIB010000111 DADMIB010000000
VERSION     DADMIB010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13584
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.111"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(241..1614)
                     /gene="cobA"
                     /locus_tag="JNZ89_002994"
     CDS             complement(241..1614)
                     /gene="cobA"
                     /locus_tag="JNZ89_002994"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HAY8936790.1"
                     /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
                     FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDTLNQRVSEAAEARRIFCNV
                     VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
                     LRGRVKQQFTTMSERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
                     VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
                     VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
                     GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
                     KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
                     LNWFSNH"
     gene            complement(1633..2439)
                     /gene="nirC"
                     /locus_tag="JNZ89_002995"
     CDS             complement(1633..2439)
                     /gene="nirC"
                     /locus_tag="JNZ89_002995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HAY8936791.1"
                     /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
                     IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW
                     AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
                     NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
                     LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKSNRPVADKFNQTETAAG"
     gene            complement(2566..2892)
                     /gene="nirD"
                     /locus_tag="JNZ89_002996"
     CDS             complement(2566..2892)
                     /gene="nirD"
                     /locus_tag="JNZ89_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HAY8936792.1"
                     /translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
                     IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
                     VVQLRG"
     gene            complement(2889..5432)
                     /locus_tag="JNZ89_002997"
     CDS             complement(2889..5432)
                     /locus_tag="JNZ89_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HAY8936793.1"
                     /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
                     DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
                     DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
                     AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
                     EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
                     YAIGECASWNNRIFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
                     DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
                     LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
                     AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
                     EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
                     VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
                     FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
                     RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY
                     IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVVCEWTETV
                     NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
     gene            complement(5694..6875)
                     /gene="tsgA"
                     /locus_tag="JNZ89_002998"
     CDS             complement(5694..6875)
                     /gene="tsgA"
                     /locus_tag="JNZ89_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter TsgA"
                     /protein_id="HAY8936794.1"
                     /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
                     MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSTA
                     MFILGVVSGITMSIGTFLITQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI
                     EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCY
                     ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV
                     LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
                     TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
                     H"
     gene            7146..7718
                     /gene="ppiA"
                     /locus_tag="JNZ89_002999"
                     /gene_synonym="rotA"
     CDS             7146..7718
                     /gene="ppiA"
                     /locus_tag="JNZ89_002999"
                     /gene_synonym="rotA"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase A"
                     /protein_id="HAY8936795.1"
                     /translation="MFKSTLAAMAAVFALSALSPAAMAAKGAPHVLLTTSAGNIELEL
                     DKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
                     NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
                     KISQVPTHDVGPYQNVPSKPVVILSAKVLP"
     gene            7823..7990
                     /locus_tag="JNZ89_003000"
     CDS             7823..7990
                     /locus_tag="JNZ89_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfG family protein"
                     /protein_id="HAY8936796.1"
                     /translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA
                     RLVELRRHYER"
     gene            7980..8582
                     /locus_tag="JNZ89_003001"
     CDS             7980..8582
                     /locus_tag="JNZ89_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative adenosine monophosphate-protein
                     transferase Fic"
                     /protein_id="HAY8936797.1"
                     /translation="MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRA
                     ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
                     MQDLEEEGYLVGLEKTKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
                     SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
     gene            8614..9177
                     /gene="pabA"
                     /locus_tag="JNZ89_003002"
     CDS             8614..9177
                     /gene="pabA"
                     /locus_tag="JNZ89_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 2"
                     /protein_id="HAY8936798.1"
                     /translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
                     QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
                     KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPGSLPACFDVTAWSETREIMGIRHRQW
                     DLEGVQFHPESILSEQGHQLLANFLHL"
     gene            9263..10483
                     /gene="argD/dapC"
                     /locus_tag="JNZ89_003003"
     CDS             9263..10483
                     /gene="argD/dapC"
                     /locus_tag="JNZ89_003003"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     acetylornithine/succinyldiaminopimelate transaminase"
                     /protein_id="HAY8936799.1"
                     /translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY
                     VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
                     VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
                     FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTASTPEFLQGLRELCDQ
                     HQALLVFDEVQCGMGRTGDLFAYMYYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
                     HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
                     IRGMGLLIGAELKPHYKGRARDFLYAGAEVGVMVLNAGPDVMRLAPSLVVEDADIDEG
                     MQRFAHAVAKVVGA"
     gene            complement(10550..12640)
                     /locus_tag="JNZ89_003004"
     CDS             complement(10550..12640)
                     /locus_tag="JNZ89_003004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936800.1"
                     /translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
                     ACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTA
                     ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
                     LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
                     AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
                     RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
                     YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWI
                     LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY
                     LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
                     QSGLLRKNAHDALEAYQEAIRLILCEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
                     AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQ
                     RLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
                     HGIWLSRKLRDSKA"
     gene            complement(12691..13323)
                     /gene="crp"
                     /locus_tag="JNZ89_003005"
     CDS             complement(12691..13323)
                     /gene="crp"
                     /locus_tag="JNZ89_003005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HAY8936801.1"
                     /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
                     KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
                     FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
                     PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
BASE COUNT         3289 a         3494 c         3557 g         3244 t
ORIGIN      
        1 tccctatgta ttatatatta attaatattc attgattata tgaatataag cagactgctc
       61 gttaagaacg atacaggaat atttaattgg cgtcagtgag cgaatgactt aattttgtaa
      121 gtcgctgtaa cggtgaatat aacccattag cagataatat ttattaaggg gttatgtttt
      181 atttgctgaa tatataaaaa gagtcattaa gaaggccaga attctctggc ccgggttaaa
      241 ttaatggttg gagaaccagt tcagtttatc gcgcaggcca acaacccgac caataataat
      301 tagcgatgga ctgttcattt gctgagcaag ttcaccgagt tgcgtgagcg taccgtcaat
      361 cacgcgctgc gtgactgccg ttccgttttc gacaattgcc accggcattt cgccaggcat
      421 accgtgttca atcagctttt gctgaatagt cgcggcctga ttcaacccca tatagaacac
      481 cagcgtctgt ttttctgccg ccaggttttc ccagtccagc tcgccaccgg tttttaagtg
      541 tccggtaatt aagcgtacgc tctgggcata atcgcgatgc gtgagtggaa tacccgaata
      601 ggcagagcaa ccagaagctg cggtaatacc cggaaccacc gagaacggaa tacccgcgtt
      661 gcacagtgtt tccagctctt cgccaccacg gccaaaaata aacggatcgc cacctttcag
      721 ccgcaccacg cgtttgcctt tttgcgcttc ccgcagcagg atctggttaa tctcttcctg
      781 cggtacacag tggtatcccg cgcgtttgcc gacgaaaacg cgatcagcat cgcggcgtac
      841 cagattcata atatcgtcag aaaccagacg gtcgtagacc accacatctg cctgctgaat
      901 ttgttgcagt cctttcagcg tcagcagccc ggcatcgccc ggacctgcac caaccagcac
      961 cacttcaccg cgatggtcga gcggttcgtt gattaactgt tcggtcgttt cagtaatggc
     1021 tttctgatcg ttgtttgcca gcgactgcgc caggcggtcg ttaacgaaca atttctccca
     1081 gaaacggcga cgctcactca tcgtggtgaa ctgttgtttc actcgcccgc gtaattgccc
     1141 ggcatatttc gccacctggc ccagatgcaa cggcagcagt gattcgagtt tttcgcgcaa
     1201 caggcgcgcc agaaccggag aggtgccgcc agaggagacc gctaccatta gcggtgagcg
     1261 gtcaataatc gacggcataa taaagctggc ggctttcggc gcatcgacta cgttacagaa
     1321 gatgcgacga gcttcagcgg cttcgctgac gcgctggtta agcgtgtcat catccgtcgc
     1381 tgcaatcgcc agccagcagg tgtcgagaag gctttcatca aatggccctt cgacgagggt
     1441 taacatgcct gcatctgccc atgcggtgaa ctgtggaata aacgctaatg cattcaccgt
     1501 taagcgagcg cctgcgtcta acagcaacct tgctttgcgt tccgcgacat caccaccgcc
     1561 gacaatcaga cagtcgcgat cgcgtaattg gcaaaatata ggcaaatgat ccacgtaaaa
     1621 accccttagt aattaaccgg cagccgtttc agtttgatta aatttgtccg caaccggacg
     1681 attcgatttc ggcgtagcat accaataacc caatcccatg aatacggcac ctgataaagt
     1741 attacccagc gtcacccaca gcaggttatg accaataccc gccagcgtgt aggcttcgct
     1801 gtggttgccg aaccaggaga gcgcgaacag cgtcatgtta gcgatagagt gctcgtagcc
     1861 ggacgcgata aatgccagca gacaccacca gatagcgata aatttcgccg ccccttcagt
     1921 gcgcagcgcc atccagattg ccaggcaaac cagccagtta cacaatgcac ctttgaagaa
     1981 gagtaccatt gccggtgcag tggttttagc cagcgcgacg gagtgaacga tgctggtatc
     2041 taccggcagc aggctaccgc cgccccagct atagagcatg gcaacgaaga cggaaccgac
     2101 caggttaccc agccaggttt gcggcaggat tgcccacatt tgcccgtggc tgatgctgcc
     2161 cgcttttacc ccaaaggtga ggaacatggt gtgtccggtg aacagttcag aaccggcgat
     2221 aatcaccagc gttaaggcga taccaaaggt cgcgcccatc accagcggac gtacggacgg
     2281 gtcgagcaaa ttaccgagcg tgaaaatcaa gatgatccca agacccacat acgcgcccgc
     2341 catggcggag ctgacccaaa agccgagcgg gttatttgcc gacaggcgtg caatgcgcgc
     2401 agcgttagcc gcacacttat taatagtgtc tgtaaacatt tgattatcct ttaaaaaata
     2461 aaaacaaaaa aataaaacaa aaagtttaaa aaatgtcctg caatataccg aaggtaatta
     2521 caggaccatg caaaaagggg aggcattgcg cctcccgtta aaacattaac cgcgcagctg
     2581 caccacgccg tctttcactc gtgcttcgta atgtttgacg gaaaactgtt cgtcttccat
     2641 gcacaagcca tcacttaagc gaaaacgctg ttttttcagc gggctggcga cccacagctc
     2701 gccctggtgt tccgcaatca gcccgcgtga cagcacgctg gactcgaaga acggatcgat
     2761 gttgctgatc gcaaacacct ggtcgctgtg atacgggcgg aaaatcgcga cctgctcgtc
     2821 gcctaacagc gcgcagacgc cggtttcagg caggatgtca tcgattttgc agatgtcttt
     2881 ccactggctc atgcgttgtc ctccaccaga gttaccggga tacgttcata cggcgttgcc
     2941 ggacggtgct gttcgcgctc tggcaccatc tgcacgttcg ggtcacgctt gtcgctgttg
     3001 atgaagtgtt tgaagcgagt ctgcgcggac ggtgtattga ccgtttcagt ccactcacac
     3061 actaccgctt cacgcaggcg cgccatctct tcttccagat gagcgttcag ccccagtttg
     3121 tcgtcaatga tcaccgcttt caggtaatcg atgccgcctt cgaggttttc taaccacggc
     3181 gcggtacgcg tcagtttgtc ggcggtacgg atgtagaaca tcatgaagcg gtcgagatat
     3241 ttgatcagcg tttcgcgatc gatatcagct gccagcagat ccgcatgacg cggtttcatg
     3301 ccgccgttgc cgcaaacata caggttccag cctttttcag tggcgataat acccacgtct
     3361 ttaccctgag cttctgaaca ttcacgggta cagccggaga caccgaactt cattttgtgc
     3421 ggcgtacgga tgcctttgta gcggttttcc agttccacgc cgaggccgac gctgtcgcca
     3481 acgccgtagc ggcaccaggt gctacccacg caggttttcg ccatacgcag tgctttcgca
     3541 taggcatgac cggtttcgaa gccggcttca atcagctgac gccagatctc tggcagatcg
     3601 tctttctgtg cgccaaacat cgccaggcgc tgggaaccgg tgattttggt gtagagatta
     3661 aattcacgcg cgatacgacc cactgccatt agcccttccg gggtgatttc accgcccgga
     3721 gaacgcggga tcaccgagta ggtcccgtct ttctggatgt tagcgaggaa gttgtcgtta
     3781 gaatcttgca gcggagtatg ttctggcttc agaatgtatt cgttccagca ggaggccagc
     3841 agcgaaccga cggtcggttt acaaacttca caaccgtagc ctttgccgtg tttcgccagc
     3901 agttcttcga aggttttaat gccttcaacg cggatcaaat ggaacagttc ctgacgcgaa
     3961 taagcaaagt gttcgcacag gttgttgtta acttcgatgc cctgtttcgc cagttccgcg
     4021 ttcagtacct gagtgaccag cgggatacag ccaccgcagc cagtacccgc tttggtttca
     4081 gctttcagcg ccgcaactgt gtggcagcct ttgttgatgg cagcaatcag atcaccttta
     4141 gtgacgtcga agcaggagca gatttgcgcg ctgtccggca gtttatcaac accgatagac
     4201 ggcttaccgc tacccgagtg cgccggcaga atcagagaat ccgggttttc cggcagctcg
     4261 atagcattca gcaccagttg cagcaagtta ccgtagtcgc tggtatcgcc caccagtacc
     4321 gcaccgagca gggttttgtt gtcttcgctg acgatcaggc gtttgtagat ctctttgctt
     4381 tcgtcgaggt aaacgtagct acgtgcgcca ggcgtgcgac catgagcatc accaataccg
     4441 cctacgtcca cgcccagcag tttcagcttg gcgctaaggt cagcaccttc aaaggcgttt
     4501 tcgctaccga gaatatggtc aacggcgacc tgcgccattt tgtagccagg tgctaccaga
     4561 ccaaatatac ggttgttcca gcttgcgcat tcaccgatag cgtagatatc cggatcggaa
     4621 gtttggcagg aatcattaat gacgataccc ccacgcggag caacgtccag accacactgg
     4681 gttgccagct tatcgcgcgg acggataccg gtagagaaga cgataaagtc gacttccagt
     4741 tcgctgccgt cggcaaaacg catggtttta cgtgcttcga caccttcctg cacaatctca
     4801 agggtgtttt tgctggtgtg aacgcgcacg cccatacttt cgattttgcg acgcagctgc
     4861 tcgccaccca tctgatcaag ctgttccgcc atcagcatag gggcaaattc gataacgtgg
     4921 gtttcaatac ctaagttttt cagcgcgcca gcggcttcca gacctaacag gccgccacca
     4981 acaacggcac cgcgtttgct gcgacgggcg caggattcaa tggcgttgag gtcttcaatg
     5041 gtgcgataga caaagcagtc ctgagtatca gaacctttga ttggtgggat ccacgggtag
     5101 gaaccggttg ccatgatcag cttgtcataa aaaacggtac gtccggcgct ggagtgaatc
     5161 accttctcct gacggttgat ggtgatagcg cgttcgccga ccagaacttt gatgccgtgt
     5221 ttctcgtaga agccttcgcg caccagcgac agctcttcgg cggtgtggtg agagaagtaa
     5281 gacgagaggt gtacgcggtc ataagcgatg cgcggttctt cacagaaaac ggtaatatca
     5341 aagttggccg catcagattt atcaagaaga tcttcgataa agcgatggcc gaccataccg
     5401 ttaccgataa ttgcgagtct gactttgctc atttttgcct cgatttcttt tctattaccg
     5461 cctaccttaa cgattcagca accccgctta ttgatgtaaa tcaaattcac ctttatatac
     5521 cccttaaggg gtatgttgct gatttgtata aattttctta agtcacggaa ttgtctgaca
     5581 tttcatgttt gtgcaaaaaa tagacaaaat gaacgggttt atagaaatag atgcacgtag
     5641 cggggttaga gaggaaaagg ccggacgacg atagtgccgt ccggcattag caattaatga
     5701 gaggtcaggg tgttatgctg acggtgacgg ctgacgaaac ctaacaggaa gcacatcaca
     5761 aagacgacag cgtacagacc gtttgctgta agcagtgccg cctgcggacc gctatgttca
     5821 acaatcgggc cggtaaccac aaaggtcaac atagtaccga tggttccgca ggtcaggaca
     5881 aagttaacca gttttggcga cggtactttg gtctgctgtg aacccagggt gatgatggtg
     5941 gtatagatcg cgctggagaa gaagcccaga gcgagaattg accacgccat atgtgctggt
     6001 gttccggtgt taaagacgta catcagaatc gcagccagac cagccagtac ggtcagaatg
     6061 cgttgcaaat caaagaagcg aagaataaag ctgaacgccc acatgccgac catgtatgac
     6121 atccagaagt tactcaccag cgtgcccgcg tcgttcaggc tcatgcccag gcctttggca
     6181 tactcaggca cccaggagat aaaacctaac tgaccgagga tgtagcacag cgccgcaaca
     6241 gagagaaaca gtacgccgat cccccacttt tctttctcta ccggagcatc cgtttttggt
     6301 gcatgtttgc ccagtgctgg gaactcacag ccgaaggtca gaataaaaat agcgacatac
     6361 accagcccga tgcaggcata aacccagtac cactcaatgc tgcgcgccag tagaaacgcg
     6421 gcgatcattg ggaaaatcat cccagccata ctgaagaagg agtcagtaaa taacaggcgg
     6481 gaaccgcgct gacgcccttc atacatttgt gttatcagga atgtaccaat cgacatagta
     6541 atgccgctga ccaccccgag aatgaacatc gccgtcgaga acagcgccag gctgtggctg
     6601 aacatcaaac cggcaaccgc cagcaccatc aggagaaagc caaaacgtaa ctgcgttttc
     6661 aacgggacga tttccatcag ccaggcgttg aggaagatag agattaaaat gccggcgttg
     6721 aggaaggtga aggtgttact catactggaa acaggcagat tgaaataatc ggcgatattt
     6781 cccatcacca tcccggtgac aataaccaac gcaccagtca gtgcgtagga gagaaagcta
     6841 atccatgtga gcttgatgcg attgctgtta gtcatgattg gcctgcgttc aaaaataaaa
     6901 tggcatagcg ggatatgccg cgagcgggtg attttaggtg attttgtgat ctgtttaaat
     6961 gttttattgc aatcggttgc taaattgcat tttaagaagt gatcttgatc acggaataaa
     7021 aagtgatcgt caggttacat atatttcaga tacgtaaaat taggtaaagg gatggccttg
     7081 ttcttgaagg ctatttagaa tctcttcact tgcttttttt ctgctctgtt tgttaaggaa
     7141 atctcatgtt caaatcgacc ctggcggcga tggctgctgt tttcgctctt tctgctcttt
     7201 ctcccgcagc aatggcagcg aaaggggccc cgcacgtatt gttgacaacc tcagctggta
     7261 acatcgaact ggagctggat aaacaaaaag cgccagtgtc tgtgcaaaac tttgtcgatt
     7321 atgtgaacag cggtttttat aacaacacta cctttcaccg cgtcattcct ggctttatga
     7381 ttcagggcgg cggtttcacc gagcagatgc agcagaaaaa accaaacccg ccaatcaaaa
     7441 atgaagccga taacggcctg cgcaacacgc gtggcaccat cgcgatggcg cgtaccgctg
     7501 acaaagatag cgccaccagc cagttcttta tcaacgttgc cgataacgcc ttccttgacc
     7561 atggtcagcg tgatttcggt tacgcggtat ttggtaaagt ggtgaaaggc atggacgtgg
     7621 ccgataagat ttcccaggtg ccgactcatg acgttggtcc gtaccagaat gtgccgtcaa
     7681 aaccggtagt tatcctttcc gctaaagtcc tgccgtaatg atttctcgcg cgggcaatct
     7741 tgcccgcgct tctgctctcc cggcgtaacc cggatttgcc gcttatactt gtggcaaatg
     7801 gacacgttca gggaggcatc aagtgaagaa actcaccgat aagcaaaagt cccgtctctg
     7861 ggagcttcag cgtaatcgta atttccaggc cagtcgccgt cttgaaggcg tcgagatgcc
     7921 tttagtcact cttactgccg cagaggcttt agcgcgcctt gtagagctga ggaggcacta
     7981 tgagcgataa attcggcgaa gggcgcgatc cgtatcttta tccaggcctt gatatcatgc
     8041 gtaaccggct gaacatccgc cagcaacaac ggctggaaca ggccgcttac gaaatgacgg
     8101 cgctgcgtgc tgcgaccatt gagcttggtc cgctggtgcg cggtttaccg catttgcgaa
     8161 ctatccatcg ccagctgtat caggatattt tcgactgggc agggcaactg cgtgaagttg
     8221 atatttatca gggcgatacg ccgttctgcc actttgctta tatagaaaaa gagggcaatg
     8281 ccctgatgca ggatctggag gaagaaggtt atctggttgg cctggagaaa acgaagttcg
     8341 tcgagcggct ggcgcattac tattgtgaaa tcaacgtgct gcatcccttc cgggtgggaa
     8401 gtggtctggc acagcggatc ttcttcgagc aactggcgat tcatgccgga tatcaactga
     8461 gctggcaggg tatcgaaaaa gaggcctgga atcaggcaaa tcagagtggg gcaatggggg
     8521 atctcaccgc actgcagatg atatttagca aagtggtaag cgaagccggg gaatctgagt
     8581 aaaatagcgc ggttctttcg taccggagcc gccatgatcc tgcttattga taactacgat
     8641 tcttttacct ggaacctcta ccagtacttt tgtgaactgg gggcggatgt gctggttaag
     8701 cgcaacgatg cgttgacgtt ggcggatatc gacgccctta aaccacaaaa aattgtcatc
     8761 tcacccggcc cctgtacgcc agatgaagcc gggatctccc ttgacgttat tcgccactat
     8821 gccgggcgct tgccgattct tggcgtctgc ctcggtcatc aggcaatggc gcaggcattt
     8881 ggcggtaaag ttgtgcgcgc cgcaaaggtc atgcacggca aaacctcgcc gattacacat
     8941 aacggtgagg gcgtatttcg ggggctggca aatccactta ccgtgacacg ctaccattcg
     9001 ctggtggtgg aacctggctc attaccagcg tgctttgacg tgacggcctg gagcgaaacc
     9061 cgcgagatta tggggattcg ccatcgccag tgggatctgg aaggtgtgca gttccatcca
     9121 gaaagtattc ttagcgaaca aggacatcaa ctgctggcta atttcctgca tctctgattt
     9181 ccgattgcca ttcagtgatt ttttatgcat attttgtgat tataatttca tatttattta
     9241 tgcgtaacag ggtgatcatg agatggcaat tgaacaaaca gcaattacac gcgcgacttt
     9301 cgatgaagtg atcctgccga tttatgctcc ggcagagttt attccggtaa aaggtcaggg
     9361 cagccgaatc tgggatcagc aaggcaagga gtatgtcgat ttcgcgggtg gcattgcagt
     9421 tacggcgttg ggccattgcc atcctgcgct ggtgaacgcg ttaaaaaccc agggcgaaac
     9481 tctgtggcat atcagtaacg ttttcaccaa tgaaccggcg ctgcgtcttg ggcgcaaact
     9541 gattgaggcg acgtttgccg aacgcgtggt gtttatgaac tccggcacgg aagctaacga
     9601 aaccgccttt aaactggcac gccattacgc ctgtgtgcgt catagcccgt tcaaaaccaa
     9661 aattattgcc ttccataacg cttttcatgg tcgctcgctg tttaccgttt cggtgggtgg
     9721 gcagccaaaa tattccgacg gctttgggcc gaaaccggca gacatcatcc acgttccctt
     9781 taacgatctc catgcagtga aagcggtgat ggatgatcac acctgtgcgg tggtggttga
     9841 gccgatccag ggcgagggcg gtgtgacggc atcgacgcca gagtttttgc agggcttgcg
     9901 cgagctgtgc gatcaacatc aggcattatt ggtgtttgat gaagtgcagt gcgggatggg
     9961 gcggactggc gatttgtttg cttacatgta ctacggtgtg acgccggata ttctgacttc
    10021 tgcgaaagcg ttaggcggcg gcttcccgat tagcgccatg ctgaccacgg cggaaattgc
    10081 ttctgcgttt catcctggtt ctcacggttc cacctacggc ggtaatcctc tggcctgtgc
    10141 agtagcgggc gcggcgtttg atatcatcaa tacccctgaa gtgctggaag gcattcaggc
    10201 gaaacgccag cgttttgttg accatttgca gaagatcgat cagcagtacg atgtgtttag
    10261 cgatattcgc ggtatggggc tgttaattgg cgcggagctg aaaccacact acaaaggtcg
    10321 ggcgcgtgat ttcctgtatg cgggtgcaga ggttggcgta atggtgctga atgccggacc
    10381 ggatgtgatg cgtttagcac cgtcgctggt ggtggaagat gcggatatcg atgaagggat
    10441 gcaacgtttc gcccacgcgg tggcgaaggt ggttggggcg taaataagac gcatcaggca
    10501 aaatatgtcg gatgcggcgt gaatgcctta tccgatggtt tagcctgtat tacgccttcg
    10561 aatcccgcaa cttgcgactc agccaaatcc cgtgatgcgg tcgctgacgc catgccatcg
    10621 acgaaatggt gtgcatggtg ttcagatgac caataacccg ctgtaaatgc tgctccagcg
    10681 tacctgccgc gccttcgtgc ggctgcatct ccggcgcatc catgatattg gcatcgccag
    10741 aactacccgg ttcgtcatac tccagtcgct gctgacaacg ctgaatggcg atttcacaag
    10801 actgtaaata ctcttgtgcc agttcaggtg gcaatgcccg gtgttcccgc gccagcgtgg
    10861 tcatggcatt aatatgctca acaataaact ggctgtgcgt tacccacagt ttcatatctg
    10921 ccagataatg gctgttaaac gccggttcct gcatcgcctg attcaatgag ttatacagag
    10981 tgttatgtgc ctgatttacc cgcattcgct gccaggccag tggcgtaggt tgcggatcct
    11041 cgcaaagaat caagcgaatc gcttcctgat aggcttctaa agcgtcatgg gcgtttttac
    11101 gcaataaccc gctctgccac tgcggccaca gccagacagt accgccgaaa gcaattaaac
    11161 aaccaataat ggtatcgata agacgcggaa ggatgtattg ctcgccgttc aaccacaata
    11221 gttgcagggt atacactgcg gtaatagtaa aaccgaccgt cgcccagccg tagtttttgc
    11281 gcaatatcag gtagctggcg agggtggtaa tcagcatcaa cgtcagggtg taaccttcgg
    11341 gaattttaaa gtgcagcgcc acgcccgcaa tgattaaccc gaccacggtt cccacggagc
    11401 gattcacaat cctcagacgg gttgcgccat agccattttg tgtcaccagc aataccgtca
    11461 tcaggatcca gtacgacttc ggcagatgca gcgcggtgcc catcaggctg gcaacgctta
    11521 acatcacact gagtcgtccg gcattgcgta gcgccggaga ctttagtgac agataacttt
    11581 tcagcgcagg aagtaatggc attcgccgct gtttatcggc cagtaagtca cgggcataga
    11641 gcggtttttg ggtgcgcagc acgcgggcga tgcggctgaa atgccagtag cagaattgcc
    11701 caaccggatt atccggatgc tggcgggcga ttttttccag tgcgccaatt tgcttttcca
    11761 tcgtaaaacg cgttggcagg cgatggtaaa gaatgtcatc agccagcacg cgcaggcgag
    11821 cggcgacggt ttgcgcattc cagcggataa cttcttccgc atggctacgc tcgaccagct
    11881 tttgcacctc ttccggctga tgcaaactga ccgaaatatg ttcctgtaaa tccagcgcct
    11941 cctggaaaat acgcagcatc cgcttgtagt cagtattatt ttgcgcggaa agcatatgca
    12001 tttgctgata gcactgggta attagatcga ccgctttttg ctggcgcacc agcagcggcg
    12061 gcagcgcttt ttcagggtcg gtgtgctggg taagcaggct gtatttggct tcacaataat
    12121 ctgccagttc acggtacagc agacttagtg actcgcgcag cggttgttcg cgccagatcc
    12181 agaaccaaaa ccagttaaac aatccgtacc agagagtgcc caacgcatag atgagcaacg
    12241 gttcccagac cggcatgtat cccgccagac tgagggtaaa aatggctgcc agcagcgatg
    12301 cgggaagcaa ttttgcgtgc aatggcccca actcagcagt gacgccaagt accagcgtta
    12361 atccggtcag caaaaagggc aggggaacat cttttgccag tagcagctgt gtcagtaagc
    12421 tacaggtggc aaacagcgac gcaccaatga ttaagcgttt gaaaaaacgt ttatgaggcg
    12481 tatcaaggcc cgcaatattg caacaggcag gaacgagaga gaagagcaga ccgaatcgta
    12541 attcgccaag cattaaccca acggccacgg gcaaacatag caccagcgtt tgtcgaagtg
    12601 catagttgat atcggggtga taaatcagtc tgcgccacat cgggggaaac aaaatggcgc
    12661 gctaccaggt aacgcgccac tccgacggga ttaacgagtg ccgtaaacga cgatggtttt
    12721 accgtgtgcg gagatcaggt tctgatcttc aagcatcttc agaatgcgtc ccacggtttc
    12781 acgagaacag ccgacaatct gaccgatttc ctgacgggta attttgattt gcataccgtc
    12841 cgggtgagtc atagcgtctg gttgttttgc cagattcagc agagtctgtg caatgcggcc
    12901 cgtcacgtcg aggaacgcca ggttgcccac tttctctgaa gtgacttgca gacgacgcgc
    12961 catctgtgca gacagacgca tcagaatgtc cgggtttacc tgaatcaatt ggcgaaattt
    13021 tttgtacgaa atttcagcca cttcacaggc ggttttcgca cgtacccatg cgctacgttc
    13081 ctggccctct tcaaacaggc ccagttcgcc aataaaatca ccctgattca gataggagag
    13141 gatcatttct ttaccctctt cgtctttgat cagcactgcc acagagcctt taacgatgta
    13201 gtacagcgtt tccgcttttt caccctggtg aataagcgtg ctcttggatg ggtacttatg
    13261 aatgtggcaa tgagacaaga accattcgag agtcgggtct gtttgcggtt tgccaagcac
    13321 catgcgcggt tatcctctgt tataagcttt ctccagagcc agataacgcc gctgtctctg
    13381 gattgccgaa atatgcttcc cgctacctgg gaaggggcta tcaactgtac tgcacggtaa
    13441 tgtgacgtcc tttgcataca tgcagtacat caatgtatta ctgtagcatc ctgactgttt
    13501 tagcatagct ttcgctttgt gtctcctggt gtctcgcttc agcatgaccc aggtcgcctt
    13561 ccgttgcgcg atttggttag tacg
//
LOCUS       DADMIB010000112        13518 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.112, whole genome shotgun sequence.
ACCESSION   DADMIB010000112 DADMIB010000000
VERSION     DADMIB010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13518
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.112"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..184
                     /locus_tag="JNZ89_003006"
     CDS             <1..184
                     /locus_tag="JNZ89_003006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY8936802.1"
                     /translation="WSLAAGANPSFIASQMGHTNAQMVFNVYGAWMKDNNHEQIELLN
                     RRLSESVPCMPHKKAG"
     gene            205..906
                     /gene="mlrA"
                     /locus_tag="JNZ89_003007"
     CDS             205..906
                     /gene="mlrA"
                     /locus_tag="JNZ89_003007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MlrA"
                     /protein_id="HAY8936803.1"
                     /translation="MGLPLIPVTLRAWQRRYGLLKPQRTDDGHRLFNDADIDRIREIK
                     RWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYP
                     AQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARRKQGKDALVVGW
                     NIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQL
                     TSWQEQGHDIFPLGI"
     gene            966..1073
                     /locus_tag="JNZ89_003008"
     CDS             966..1073
                     /locus_tag="JNZ89_003008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohO"
                     /protein_id="HAY8936804.1"
                     /translation="MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG"
     gene            complement(1054..1785)
                     /gene="yehW"
                     /locus_tag="JNZ89_003009"
     CDS             complement(1054..1785)
                     /gene="yehW"
                     /locus_tag="JNZ89_003009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehW"
                     /protein_id="HAY8936805.1"
                     /translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQE
                     SFAALALAHFWLVGISSLFVVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV
                     LAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLR
                     KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL
                     LVALAAIIADRLFERLVQALSQHAK"
     gene            complement(1790..2716)
                     /gene="yehX"
                     /locus_tag="JNZ89_003010"
     CDS             complement(1790..2716)
                     /gene="yehX"
                     /locus_tag="JNZ89_003010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter ATP binding
                     protein YehX"
                     /protein_id="HAY8936806.1"
                     /translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL
                     KMINRLVEHDSGVIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL
                     QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
                     PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN
                     PLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVCREERAEGEALAEEMTLRDALS
                     LFVARGCEVLPVVNTQGQPCGTLHFQDLLEEA"
     gene            complement(2709..3866)
                     /gene="yehY"
                     /locus_tag="JNZ89_003011"
     CDS             complement(2709..3866)
                     /gene="yehY"
                     /locus_tag="JNZ89_003011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehY"
                     /protein_id="HAY8936807.1"
                     /translation="MTYFRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQL
                     WPQTIWMLVGVGCAWLTACFIPGKKGSICALILAQFVFVLLVWGAGKAATQLAQNGSA
                     LARTSLGSGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDL
                     SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNV
                     IQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVV
                     GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIG
                     AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND"
     gene            complement(3873..4790)
                     /gene="osmF"
                     /locus_tag="JNZ89_003012"
     CDS             complement(3873..4790)
                     /gene="osmF"
                     /locus_tag="JNZ89_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein OsmF"
                     /protein_id="HAY8936808.1"
                     /translation="MPLSKVWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNII
                     LQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQ
                     QGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLKEGGTF
                     KLAASAEFIERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQISGVNAAMA
                     YGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTL
                     QQLNASIAVEGLDAKKVAADYLKQKGWTK"
     gene            complement(5042..7339)
                     /gene="bglX"
                     /locus_tag="JNZ89_003013"
     CDS             complement(5042..7339)
                     /gene="bglX"
                     /locus_tag="JNZ89_003013"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HAY8936809.1"
                     /translation="MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKK
                     MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL
                     KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD
                     VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG
                     GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
                     QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKS
                     GKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGSKESDPVDTNAESRLHRKEAREVAR
                     ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAV
                     GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDMVVAV
                     VGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA
                     ILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKP
                     NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKRE
                     GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD
                     AEPGKFNVFIGTDSARVKKGEFELL"
     gene            7535..9250
                     /gene="dld"
                     /locus_tag="JNZ89_003014"
     CDS             7535..9250
                     /gene="dld"
                     /locus_tag="JNZ89_003014"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HAY8936810.1"
                     /translation="MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
                     DALAVVFPSSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTL
                     RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
                     GSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH
                     DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ
                     QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT
                     DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
                     LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD
                     EVEDILALDIALQRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH
                     ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN
                     WQEVE"
     gene            complement(9289..10221)
                     /gene="pbpG"
                     /locus_tag="JNZ89_003015"
     CDS             complement(9289..10221)
                     /gene="pbpG"
                     /locus_tag="JNZ89_003015"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311048.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HAY8936811.1"
                     /translation="MPKFRVSLFSLALMLAVPLAPQAVAKTAAAITASQPEIASGSAM
                     IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY
                     SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR
                     FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNH
                     LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW
                     IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND"
     gene            complement(10395..10982)
                     /locus_tag="JNZ89_003016"
     CDS             complement(10395..10982)
                     /locus_tag="JNZ89_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014170891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HAY8936812.1"
                     /translation="MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICA
                     FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS
                     LAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
                     EGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF"
     gene            11152..11730
                     /locus_tag="JNZ89_003017"
     CDS             11152..11730
                     /locus_tag="JNZ89_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416640.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8936813.1"
                     /translation="MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLV
                     VLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFM
                     YGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
                     KHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA"
     gene            complement(11860..12621)
                     /locus_tag="JNZ89_003018"
     CDS             complement(11860..12621)
                     /locus_tag="JNZ89_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8936814.1"
                     /translation="MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTA
                     REVVSHGVRAEIVQLDLGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFD
                     EWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL
                     GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIA
                     SLVAWLCSEGANYTTGQSLIVDGGFMLANPQFNPE"
     gene            complement(12674..>13518)
                     /gene="mdtQ"
                     /locus_tag="JNZ89_003019"
     CDS             complement(12674..>13518)
                     /gene="mdtQ"
                     /locus_tag="JNZ89_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311052.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug resistance outer membrane protein
                     MdtQ"
                     /protein_id="HAY8936815.1"
                     /translation="AALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINASK
                     TRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRAD
                     LQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTL
                     PIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIE
                     RDTLRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGG
                     GYKR"
BASE COUNT         3241 a         3779 c         3410 g         3088 t
ORIGIN      
        1 ctggtcactt gccgcaggag ctaatcctag ttttatcgca agccagatgg gccacacaaa
       61 cgcacaaatg gtattcaatg tttacggagc atggatgaaa gacaacaatc acgaacagat
      121 agaacttctt aacagaagac tatctgaaag tgtcccatgc atgccccata agaaagcggg
      181 gtaaaataaa aacttgcaaa atcaattggt ttacctttaa tccctgtcac gttacgcgcg
      241 tggcagaggc gttacgggtt gctgaaaccg caacggacag acgacggtca tcgactgttc
      301 aacgatgccg atattgaccg gatccgcgag atcaaacgct ggatcgacaa cggcgtgcag
      361 gtcagcaaag ttaaaatgct gctcagtaat gaaaatgttg atgtgcagaa cggctggcgc
      421 gatcagcaag aaacattact gacctacctg caaagcggca atctgcatag cctgcgaacg
      481 tggatcaaag agcgcggtca ggattacccc gcccagacac tcaccacaca tctgtttatt
      541 cctctgcgcc gacggcttca gtgccaacaa ccgactctcc aggcgctgct ggcgatcctc
      601 gacggcgtac tgatcaacta catcgccatt tgtctggctt cggcacgtag aaaacagggt
      661 aaagatgcgc tggtggttgg ctggaatatt caggatacca cccgtctgtg gctggagggc
      721 tggattgcca gtcaacaagg atggcgcatt gatgtcctcg cccactcgct caatcaacta
      781 cgccctgaac tattcgaagg ccgtacattg ctggtgtggt gcggtgaaaa tcgaacctcc
      841 gcccaacagc agcaactcac cagttggcaa gaacaaggcc atgatatttt cccactcggc
      901 atttaatgat tcgttaacaa atgcgcttta ctgtacaatc ctttcgttaa cataaggagt
      961 gcaatatgcg catagctaaa attggggtca tcgccctgtt cctgtttatg gcgttaggcg
     1021 gaattggtgg cgtcatgctc gcaggttata cctttatttt gcgtgctggc taagcgcctg
     1081 caccagcctt tcaaacaggc ggtctgcaat gatcgccgcc agtgccacca gtaacgcccc
     1141 ctggatcaca tacgcggtat taaatccgct aagcccgatg atgatgggcg tacccagcgt
     1201 gctggcccct accgttgagg cgatcgtcgc cgtaccaatg ttgataatca ccgaagttcg
     1261 cacgcccgcc agaatcaccg gagccgccag cggtagctcg accttacgca gtcgctgacc
     1321 acgactcatt cccatacctt tcgcaacttc tgtcacgctg gcatcaatcg ctcccagccc
     1381 ggcaagtgtc gcctgcagga cgggcagcac accgtaaagg atcaaggcga taatcgctgg
     1441 ttgcagacca aagccgatca ccggaacggc aatcgccagc actgcgacag gcggaaaagt
     1501 ctgtccaacg gcggcaatag tttccaccag tgggcgaaat tccgcgcccc acgggcgagt
     1561 gacagcaatt ccggcaccag tgccaatgat caccacaaac aaactcgaaa ttcccaccag
     1621 ccagaaatga gccagtgcca gagctgcaaa actttcttgc tgataaacgg gtcgtggcag
     1681 ttgtgggaac aaggcagcaa acagcggctg gctgtaaggc agccagaaaa tcagtgccac
     1741 aaacaaagca atgagccaga acagcggatc gcgcaacatc ttcatacgct tacgcctcct
     1801 ccagcagatc ctgaaaatgc agcgtgccgc aaggctggcc ctgcgtgttc accaccggca
     1861 gcacctcgca tccccgcgcg acaaacaggg agagcgcatc gcgtagcgtc atctcttctg
     1921 ccagtgcctc accttctgcc cgttcttcgc gacacacgta atccgccaca ctacgtaacg
     1981 aaagcaggcg cacacccagt tcgctgcgcc caaaaaactg gcggacaaaa tcgtttgccg
     2041 gacgagtcag catcgtcagc ggattgccct gctgcaccac ttcaccgtga tccatcaata
     2101 ccagatgttc tgccagccgt agcgcctcat caatatcatg agtgaccagc acaatggtac
     2161 gccccagcaa acggtgaatg cgcgtcatct cttgttgcaa cgcgccgcgc gttaccgggt
     2221 ccagtgcgcc aaaaggttca tccatcagta agacttgcgg atcggcagcc agtgcgcgcg
     2281 ccactcccac acgttgctgc tgaccaccgg aaagctgatg cggataacgc tcacgtaaat
     2341 ttgactccag ccccagtagc gccattaatt cgtcgatacg atcgtcaatc cgcgcccgcg
     2401 accatttttg taattgcggc acggtagcga tgttttgcgc cacgctccag tgggggaaca
     2461 ggccaataga ttgaatagca tagcccatcc ggcggcgcaa ctccagtact ggcagcgagc
     2521 gaatttcttc tccggcaaag cggatcactc cgctgtcatg ctccaccagg cggttaatca
     2581 ttttcagggt ggtggatttg ccggagccag atgtgccaat cagcaccgaa aaactccctt
     2641 cctgaaaatt gagattgaga tcgttaacgg ctttttgtgc gccgaacagt ttgctgacat
     2701 ggctaaattc aatcattacg tttcaccttc agcagtgcga taagcaaatc gaacagcgcg
     2761 tcggtaagca ccgccagaac aattaccggg atcaccccca gcaacactaa atcaatggcg
     2821 ctgcttagca gcccctggaa aaccagcgca ccaaaaccgc ctgcgccgat taacgccgca
     2881 atcaccgcca tacctacagt ttgcaccatc accacccgca ggctgcgcag aaataccggt
     2941 aacgccagtg gtaactgaac atgcaggaat cgctgcgccc cgctcatgcc catcgctctg
     3001 gcactctcca gcacatcgcg cgggatctgg ttcaaaccga ctaccacgcc gcgcaccagc
     3061 ggcagcaagg catagagcac cagcgcaatc agtgcgggtg tcattccggt tcctgctatg
     3121 ccgagcttcc ccagccacgg aaaggccgtc accagcgcgg caagcggcgc aatcaacagg
     3181 ccaaagagcg ccaccgaagg cacggtctga atgacattga gcagagaaaa aattgccccc
     3241 tgccgagcag tggaaaagta gcaccagatg cccaacggca caccaatcac taacgcaggc
     3301 agcaccgcac caaacagcaa cgtcagatgt tgtgccagcg cgtcgtcaaa cacatcctga
     3361 cggttggcgt attctttcat tagtgagaga tcgttaagcg tgccggagta cagcaaccac
     3421 agcggaataa tggcaatctg catatgcaac aaccagcgcc acagcggatg cgtggagatt
     3481 cggcggatgg catcgctaca ggccagcaat gccagcgccg cagccagcca gaaaccactg
     3541 ccgaggctgg tacgcgccag cgcactgcca ttttgcgcca gttgtgtcgc cgcctttccc
     3601 gcgccccaca ccagcaatac gaagacgaat tgcgccagaa tgagtgcaca aatgctgcct
     3661 tttttaccgg gaataaaaca ggccgtcagc caggcgcaac caacgcccac cagcatccag
     3721 atcgtttgcg gccacagctg ccagagatga cgcccctcac ccgaaactaa acgattaggc
     3781 gcgtaactga taaacggcag cgccgctgcg attgccgtca gcaacagcag cagcgccaga
     3841 acaggattaa tacggaaata agtcacggga aattacttcg tccacccttt ttgtttcagg
     3901 tagtcggcag ccactttttt ggcatccagt ccttccacag caatgctggc attcagttgc
     3961 tgcaatgttt ttgcatcgag gctggcgaag actggctgta gccactgtgc catttgcgga
     4021 tactccttca acaccgactc acgcaccact ggtgcaggcg cgtagatagg ttgcacacct
     4081 tgcggatcgc ttaaggtttg cagccccagc gccgctaccg ggccgtcagt gccgtaagcc
     4141 attgcagcat taacgccaga gatttgctgg gcagcggctt tgatcgtcac cgccgtgtcg
     4201 ccaccagcca gtgacagcaa ctgatcctga ccgagcttaa agccataggc tttttcaaac
     4261 gcgggtaacg catcggcgcg ttcgataaac tctgccgagg ctgccagttt gaaggtgccg
     4321 ccctctttca gataacgact caggtcggca agcgaagtga gtttattttt ctctgccaca
     4381 tcctgacgca cggcgatagt ccaggtgtta tttgcaggcg cgggcgtcag ccagattaac
     4441 ttgttgtgct ccgaatcgag ctttttgact ttctcgtaac cttgctgcgc gtttttccac
     4501 gctgcatcgt tttcatcttt aaagaagaaa gcgccattgc cggtatattc cggatagata
     4561 tccagttcac cggaagtaat cgccccgcgc accacaggag tcgttccgag ttgcacttta
     4621 ttcaccgtcg gtacgccgtg gctttccagc acctgcaaga tgatgttgcc gagtagcgcg
     4681 ccttcggtat cgatttttga accgacttta acgggggaag ccgcctgtag cggcaggctc
     4741 acggctgcca acataaccag tgaacctgcc cagacctttg agagtggcat gatgctttcc
     4801 tcattctttt actgttgttt tcagcgaatt aagagaaaag catagttgat aatgacagag
     4861 ttagcctgag cggaaggatt cagttgcaga atcagataaa tacttaaagg gcatattttg
     4921 cccggcgttt cttgccggat gcggcgtaaa cgccttatcc ggcctacaaa ggtcgaaaat
     4981 tcagcaagtt aagatatgaa catcaggcaa agggcgcaaa cgtcgcgccc ttactaaagc
     5041 attacagcaa ctcaaactcg cctttcttaa cgcgtgcgga atcagtgccg ataaagacat
     5101 tgaacttgcc aggctcggcg tcatatttca tctgttgatt ccagaacttc agcgcctcga
     5161 tatcaatcgg gaagctgaca gtctgagttt cgcccggttt cagggtgatt ttctcaaagc
     5221 ctttcagctg cttcactgga cggctcatgg aagccgtcac atcctgcaag tacatctgta
     5281 ctaccgtggc cccttcgcgt ttaccggtgt tcgtcacctg cacgctggcc gtcactttgc
     5341 cgtcacgctt catggtcggc gcagaaagtt tcacatcaga gacggtgaaa gtggtatagc
     5401 tcagaccata gccgaacgga taaagcgccc cgttagcttc atcaaaataa cgcgaagtgt
     5461 atttgttcgg cttgtcggca ttatacggac gaccggtgtt cagatggctg tagtacaccg
     5521 ggatctgccc gacagaacgc gggaaggaca tcggcagctt gccggacggg ttgtaatcgc
     5581 caaacaacac atcggcaatt gcattaccgc cttcagtccc cgcaaaccag gtttccagaa
     5641 tcgcatcagc ctgctgatct tctttcacca gcgccagcgg acgcccgttc atcagcacca
     5701 gcaccagcgg tttaccggtg gctttcagcg ccgcaatcaa gtcacgttgg ctttgcggaa
     5761 tagtgatatc ggtacggctg gaggcctcgt gcgccatccc ctgtgcttca ccgaccacag
     5821 ccaccaccat atcagattgt ttcgccgtct gcaccgcttc atcaatcatc tcttgcggcg
     5881 agcgcggatc gactttgacc gcttcttcat actgattcag gaaatcgata atgcctttgt
     5941 cactggtaac gttcgcccct ttggcataca gcactttacc gttttcaccg acggcatttt
     6001 taatcccggt cagtacggtc acggattgat cggcaacacc ggctgcggac cagctgccca
     6061 tcacgtcgcg tttactgtcc gccagtggcc caaccaccgc aatggtggcc gattttttca
     6121 gcggtaacgt ttcgagacgg tttttcagca acaccaggct ttcgcgcgcc acttcacgtg
     6181 cttctttacg gtgcaggcgg ctttcggcat tggtatccac cgggtcagac tctttcgacc
     6241 ccaaatggct gtatgggtcg ttaaacaatc ccatatcata tttaacgttc agtacatggc
     6301 gggcagcatc gtccagctct tccatcgtca ctttgccgga tttgatcaac ccaggcagat
     6361 acttcgagta atactcgtcg ctcatactca tgttgattcc ggatttcagc gccacgcgca
     6421 ccgcatcttc cgggtctgcc gccgtgccat gtttaatcag ctctttgatt gcaccgtgat
     6481 cggaaacggt gatgccttta aagccccact ggtcgcgcag aacatctttc agcagccagg
     6541 aatcggaggt ggctggcgtg ccgttcagcg agttcagcgc caccatcacc gcgccgctgc
     6601 ctgcgtccag ccccgctttg tacggcggca tataatcatt aaacaggcgc tgcggactca
     6661 tatcgacggt gttgtactct ttaccgcctt ctaccgcgcc gtatgcggca aagtgtttga
     6721 cgctggtcat caccgagtag cgatctgccg ggcttttacc ctgcatcgct tccaccatgg
     6781 ttttacccat tgttgaggtg agatacgtat cttcgccaaa accttcggaa gcacgtcccc
     6841 agcgcggatc gcgcgagaca tcgaccatcg gtgcccaggt catattcagg ccatcatctg
     6901 ccgcttcata agcagagaca cgtccgaccg ttttcactgc atcgaggtta aaagacgagg
     6961 ccagaccgag gctaatcggg aacaccgtgc gctgaccgtg cagcacgtcg taagcaaaga
     7021 aaagaggaat tttcaggcgg cttaattcca tcacctgatc ctgcatggcg cggatatcct
     7081 gacgggttac ggtgttgaaa atcgccccaa cctgaccgtc tttgatcatc tcgcggatcg
     7141 cctctttcgg gttatccggg ccgacgctga ttaagcgcag ctgaccaatt ttctcatcaa
     7201 ctgtcatttt cttaagcaat tcggtgacga acgcatcccg cgcttcgggc gtgaatggat
     7261 ggttgccgaa taaatcatcc gccagtgctg gctgcagggc cagactcacc gcgattccta
     7321 ctgaacatag ccatttcata tggatttttc ttcctctgtt gcccgacgag gcagcgaaaa
     7381 tggtgcaaaa accgtagttt gccataagca tgatggagag agaaaaagaa tgctcagttt
     7441 attgtctgaa ttttcaaaat attcactcgc tgaattgtca tacaaggcgc tattctagtt
     7501 tgtgatattt tttcgccacc acaaggagtg gaaaatgtct tccatgacaa caactgataa
     7561 taaagccttt ttgaatgaac ttgcccgtct ggtcggtcat tcacacctgc tcaccgatcc
     7621 cgcaaaaacg gcccgctatc gcaagggctt ccgttctggt cagggcgacg cgctggctgt
     7681 cgttttccct agctcactac tggaattgtg gcgggtgctg aaagcctgtg tcaccgccga
     7741 caaaattatt ctgatgcagg ctgccaatac aggcctgacc gaaggatcga cgccaaacgg
     7801 taacgactat gatcgcgata tcgtgatcat cagcaccctg cgtctcgaca agctgcacgt
     7861 tcttggcaag ggcgaacagg tgctggccta tccgggcacc acgctctatt cgctggaaaa
     7921 agccctcaaa ccgctgggac gcgaaccgca ctcagtgatt ggatcatcgt gtataggcgc
     7981 atcggtcatc ggcggtattt gtaacaactc cggcggctca ctggtgcaac gtggcccggc
     8041 gtataccgaa atgtcgttat tcgcgcgtat aaatgaagac ggcaaactga cgctggtgaa
     8101 ccatctgggg attgatctgg gcgaaacgcc ggagcagatc cttagcaagc tggatgatga
     8161 tcgcatcaaa gatgacgatg tgcgtcacga tggtcgtcac gcccacgatt atgactatgt
     8221 ccaccgcgtt cgtgatattg aagccgacac gcccgcacgt tataacgccg atcctgatcg
     8281 gttatttgaa tcttctggtt gcgccgggaa gctggcggtc tttgcagtac gtctagatac
     8341 cttcgaagcg gaaaaaaatc agcaggtgtt ttatatcggc accaaccagc cggaagtgct
     8401 gaccgaaatc cgccgtcata ttctggctaa cttcgaaaat ctgccggttg ccggggaata
     8461 tatgcaccgg gatatctacg atattgcgga aaaatacggc aaagacacct tcctgatgat
     8521 tgataagtta ggcaccgaca agatgccgtt cttctttaat ctcaagggac gcaccgatgc
     8581 gatgctggag aaagtgaaat tcttccgtcc gcattttact gaccgtgcga tgcaaaaatt
     8641 cggtcacctg ttccccagcc atttaccgcc gcgcatgaaa aactggcgcg ataaatacga
     8701 gcatcatctg ctgttaaaaa tggcgggcga tggcgtcggt gaagccaaat cgtggctggt
     8761 agattatttc aaacaggccg aaggcgattt ctttgtctgt acgccggagg aaggcagcaa
     8821 agcgttttta caccgtttcg ccgctgcggg cgcagcaatt cgttatcagg cggtgcattc
     8881 cgatgaagtc gaagacattc tggcgttgga tatcgctctg cagcgtaacg acaccgagtg
     8941 gtatgagcat ttaccgccgg agatcgacag ccagctggtg cacaagctct attacggcca
     9001 ttttatgtgc tatgtcttcc atcaggatta catagtgaaa aaaggcgtgg atgtgcatgc
     9061 gttgaaagaa cagatgctgg aactgctaca gcagcgtggc gcgcaatacc ctgccgagca
     9121 taacgtcggt catttgtata aagcaccgga gacgttgcag aagttttatc gcgagaacga
     9181 tccgaccaac agtatgaatc cggggatcgg taaaaccagt aagcggaaaa actggcagga
     9241 agtggagtaa aaattacgga tggcatagta tcgccatccg tcattcactt aatcgttctg
     9301 tgccgtctgc cccgccgccg ccatttgggc ggctttttgt tttttatagc tcaacgctgc
     9361 tgctggaaca ggcatcactt taccggtttc aatccaggta cgcaggcggc tggcatcggc
     9421 aaaatgggta tatttgccaa acgcatccat cactaccagc gccaccggtt tattattgat
     9481 aaccgtacgc atcaccagac aatggcccgc cgcattggta aaaccggttt tggttaactg
     9541 aatattccag ttatcgcgat acaccagatg gttagtattg cggaacggca gcgtatacgt
     9601 cgggttagag aaggttgcca tatcttcccg agtagtactt aactgcccga tcaacggata
     9661 ttgtttgctg gcaatgagca gtttggttaa gtcacgggca gttgaaacgt tatgcaccga
     9721 caatccggta ggttcaacaa agcgcgtgtt gttcattccg agcgatttcg ctttcgcatt
     9781 cattgcctta ataaaggctt tgtaaccacc gggataatgg tgtgcaaggc ttgccgccgc
     9841 gcggttttct gaagacatca gcgccagcaa cagcatatct ttacggctga tttcgctatt
     9901 cagtcgtacg cgcgaataga cccctttcat ctccggcgtc tggctgatat ccacttttag
     9961 tttttcatcc agcggcagtc gtgcatccag cacaaccatc gcggtcatta atttgctgat
    10021 agacgcaatc ggacgcacca gatccgggtg gttcgagtag atcactttgt tggtattcag
    10081 atcaacaatc atcgcgctac cggaggcaat ttcaggttgt gaagcggtga tagcggctgc
    10141 cgttttcgca acggcctgcg gtgccaaagg cacagccagc atcagggcca ggctaaataa
    10201 agaaactcga aatttcggca tgatgagcat tcagatagtg gttcacgcgc acaggttgcg
    10261 caccgccgga gtaaggattt actgaggcta gcgacgccat cataacgagc aaaaagtgcg
    10321 atcgtcaaag gagaatcgtg aggaaatgct gcattgctga catttacgcc agcaatgcaa
    10381 cgtcaaagaa ctttctagaa caaacgataa ccgtagcccc atagtataac ggttagggcg
    10441 agcagcactt ccagtaccag cacgccaatc gccagcgtcg aactagagaa gctaaggcct
    10501 tcctctttgt tgatattcag gaagctcgga ataccaaggt aaagcaggta gccggtgtaa
    10561 aacagcgcca ccgtgccgac cagcgcacac aaccagacca gtggataaag cgccaccaaa
    10621 ccgcttaaaa acagcggagt tgcaacgtag cccgcgaaga ccatgcagtg cgcaagtgac
    10681 ggacgctgcg gataattacg cgccatccac cagatgaccc gccccattac cgcaacccca
    10741 gccagcataa cgccataaaa caggacagcc agcgccagtc cggtaaacca ggataacttc
    10801 aggatagtgc catcgccaaa attccagcca atctgtgtag tgccaatgaa ggcgcaaatc
    10861 accggaatcg ccgccatcag caaaacgtgg tgggtgtaat ggtgagaaat cgtttcgttt
    10921 tcgcgattaa tcacctgcat ttcacgatcg ggatgggaaa acagtcccca gacatggctc
    10981 ataccgcccc cttgttgtga gttcatgaac ctgacagttc aagtataagt cagcttgtga
    11041 ttattttttg ttcgctcatg taatttgcac cgtctgatgt acgtcctttt tcagcgtgaa
    11101 tgatttccag ggtgtatgct tacaggcaac caaagggaga cagactggcc tatggatctc
    11161 aatacactca tctcacaata tggttatgcc gcgctggtga tcggtagcct ggcggaaggt
    11221 gaaaccgtga ctttgctggg aggcgttgcg gcacatcagg ggctattaaa gttcccgctg
    11281 gtggtacttt ctgtggcgct tggcggcatg attggcgacc aggtgcttta tctgtgcggg
    11341 cggcggtttg gcggcaagct gttacgccgt ttctcgaaac atcaggataa aattgagcgg
    11401 gcgcagaaac ttatccaacg ccatccgtat ctgtttgtca ttggtacgcg ctttatgtat
    11461 ggctttcggg tgattggccc gacgctgatt ggtgccagcc agctgccgcc gaaaatcttt
    11521 ctgccgctga atattctcgg cgcatttgcc tgggcgttga tttttaccac tattggttac
    11581 gctggtggtc aggtgattgc gccgtggttg cacaatctcg accagcattt gaagcactgg
    11641 gtctggttga ttctggtcgt ggttctggtg gtgggcgtgc gctggtggct gaaacggcgc
    11701 gggaagaaaa agccggatca tcaggcgtaa aaccattgcc ctgggtaagg cgttcgcgcc
    11761 gcatccgaca tccggtgcac catgcctgat gcgacgcttg tgcgtcttat catgcctacc
    11821 aaaattttac ccattgaaat aaccacgcac ctcactgcgc tattctgggt tgaactgcgg
    11881 attcgccaac ataaagccgc catccactat caacgactgc ccggtggtgt aatttgcgcc
    11941 ctctgagcac agccacgcta ccaggctggc aatctcatgc gttgcgccaa aacgccgcag
    12001 aggaatcgaa ggctccgcgt cgggcttcac gtcgctgtca tccatgccat tcattggcgt
    12061 ggcgatcgcc ccaggcgcga ctgcgttcac caaaatctta tgcctgacca gctccagcgc
    12121 catcgctttg gttaacccac cgagcgcatg tttagcggct gtgtaggcgc tggcatccgg
    12181 cagcggcgta tgttcatgta ccgatgtaat gttgatgatg cgaccgccct gcccttgttt
    12241 caccatctgg cgggccgcaa tttgtgagca taaaaatgca ccatcgacat caacggtaaa
    12301 aatcttgcgc cactcatcga aagccatatc aagaaacggc gctttggtca ttgcgcccgc
    12361 attattcacc agcacatcaa tacgccccag ccgttgaatg agtttctcca gcgcctgcgc
    12421 accttctggc agtttaccga gatccagctg cacgatctcc gcacgtacgc cgtggctaac
    12481 tacctcacgc gcggtatctt ttgccccttc ttcatctgag tgccaggtaa tgccaatatc
    12541 aaacccttgc tgcgccagta ataacgcgca ctctttgccg atccccgaat cggaggcggt
    12601 aataatcgca acctgtgcca tcgagttctc cacttaacgc tgaataaacg ttaagtatag
    12661 aaggcgcata tcatcagcgt ttgtaacccc cgcccaacgc accagtgagt tgaatggagg
    12721 catccagcca ctgcccttgc aataacaggc cattggcccg ctcacgcagc gcggggattc
    12781 tggcttcgct gacgcgggaa ccagcaatga tgcccgcgtt aaagcgcgcc tgcgcaagac
    12841 ctaccacacg caaggtatcg cgctcaattt gcgcctgatg ctggtttttc tccgcaagtg
    12901 tctgaacctg actggctgcc cgcgccacgt cattcaccgc ttcaaccacc gctttgttgt
    12961 agctggcgat agacaagttg ctttcggctt ttgcgatatc gagattggcg ttaagacgac
    13021 cactatcgaa aatgggtagc gtcaggcctg ccgtaacgcc catttgctgc gcggaatgac
    13081 ggaacagatc gcttaagtgc aacgcatcct gttgcaggaa ggccatcagg ttgatgtcag
    13141 gataaaatgc cgcttttgcc gcatcaatgg tgcttagcga tgactcaacg taccagtgcg
    13201 ccgcctgcaa atctgcccgc cgggccagta aggagtaccc cagttcatca ggaagctggc
    13261 ttgccacttt cggcaacgcg accggtttaa gcttcaatga ctttgtctgg ttatttgtaa
    13321 gtgcgcttaa ccgtgcctca ataattttca ttttccccgc gacatcgttg agctgctgcc
    13381 gggttttgct ggcattaata tcggtttcca caccttcaac tgaagaagta atcccgttct
    13441 gatatagctg gcgatcggtc gcgataatgg tgttctgctc tttttctatt tgctgcaaga
    13501 ccgtgtttaa cgccgcct
//
LOCUS       DADMIB010000113        13479 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.113, whole genome shotgun sequence.
ACCESSION   DADMIB010000113 DADMIB010000000
VERSION     DADMIB010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13479
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.113"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(102..3323)
                     /gene="carB"
                     /locus_tag="JNZ89_003020"
     CDS             complement(102..3323)
                     /gene="carB"
                     /locus_tag="JNZ89_003020"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HAY8936816.1"
                     /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
                     ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA
                     DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM
                     EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
                     VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
                     ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
                     GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGV
                     REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG
                     GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV
                     ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
                     AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
                     YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA
                     TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
                     GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD
                     ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR
                     RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK"
     gene            complement(3341..4489)
                     /locus_tag="JNZ89_003021"
     CDS             complement(3341..4489)
                     /locus_tag="JNZ89_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase small subunit"
                     /protein_id="HAY8936817.1"
                     /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
                     DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
                     KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK
                     EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI
                     VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA
                     LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD
                     GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK"
     gene            complement(4944..5765)
                     /gene="dapB"
                     /locus_tag="JNZ89_003022"
     CDS             complement(4944..5765)
                     /gene="dapB"
                     /locus_tag="JNZ89_003022"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HAY8936818.1"
                     /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL
                     LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG
                     TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
                     RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSRESHTGERVPGTIGFATVRAGDIVG
                     EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL"
     gene            complement(5932..6846)
                     /gene="rihC"
                     /locus_tag="JNZ89_003023"
     CDS             complement(5932..6846)
                     /gene="rihC"
                     /locus_tag="JNZ89_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HAY8936819.1"
                     /translation="MHLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK
                     TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP
                     AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP
                     NAEFNIAADPEAAACVFRSGIEIVMSGLDVTNQAILTPDYLATLPELNRTGKMLHALF
                     SHYRSGSMQSGLRMHDLCAIAWLVRPELFTLKPCFVAVETQGEFTSGTTVVDIDGCLG
                     KPANVKVALDLDVKGFQQWVAEVLALAS"
     gene            complement(6912..7862)
                     /gene="ispH"
                     /locus_tag="JNZ89_003024"
                     /gene_synonym="lytB"
     CDS             complement(6912..7862)
                     /gene="ispH"
                     /locus_tag="JNZ89_003024"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HAY8936820.1"
                     /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
                     VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
                     HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK
                     LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL
                     VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ
                     NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD"
     gene            complement(7864..8313)
                     /gene="fkpB"
                     /locus_tag="JNZ89_003025"
     CDS             complement(7864..8313)
                     /gene="fkpB"
                     /locus_tag="JNZ89_003025"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY8936821.1"
                     /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
                     SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
                     AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
     gene            complement(8382..8876)
                     /gene="lspA"
                     /locus_tag="JNZ89_003026"
     CDS             complement(8382..8876)
                     /gene="lspA"
                     /locus_tag="JNZ89_003026"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HAY8936822.1"
                     /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP
                     SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYA
                     LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR
                     AKKQ"
     gene            complement(8876..11692)
                     /gene="ileS"
                     /locus_tag="JNZ89_003027"
     CDS             complement(8876..11692)
                     /gene="ileS"
                     /locus_tag="JNZ89_003027"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HAY8936823.1"
                     /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
                     KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI
                     ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
                     TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD
                     QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD
                     LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
                     APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA
                     LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA
                     RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW
                     WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQH
                     RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI
                     LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV
                     VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA
                     DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL
                     ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALG
                     DELRFVLLTSGATVADYHDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV
                     AEHAEICGRCVSNVAGDGEKRKFA"
     gene            complement(11735..12676)
                     /gene="ribF"
                     /locus_tag="JNZ89_003028"
     CDS             complement(11735..12676)
                     /gene="ribF"
                     /locus_tag="JNZ89_003028"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HAY8936824.1"
                     /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR
                     KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL
                     TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG
                     GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV
                     SPVKGVYVVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL
                     RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA"
     gene            complement(12684..12902)
                     /locus_tag="JNZ89_003029"
     CDS             complement(12684..12902)
                     /locus_tag="JNZ89_003029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2575 domain-containing protein"
                     /protein_id="HAY8936825.1"
                     /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGHFLPVICAMAMK
                     SHFFLISVLNRRLTLTAVQGILGRFSLF"
     gene            13005..13268
                     /gene="rpsT"
                     /locus_tag="JNZ89_003030"
     CDS             13005..13268
                     /gene="rpsT"
                     /locus_tag="JNZ89_003030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HAY8936826.1"
                     /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
                     AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
BASE COUNT         3148 a         3805 c         3398 g         3128 t
ORIGIN      
        1 aaaagattta cttaatgggc aaaaaaaacg gtcctcatca gagaaccgta ttacttattc
       61 gatcaaatta gcggatgaaa aatatccgcc atgacacgct attatttgat ctgcgcgtgc
      121 atttcctgca ccgaaattac tttttcggtc gcgtcggcat tcagcgccat cgcggtagcg
      181 aaaccaccgt tcagggtggt gtcataatgc actttatatt gcagcgcact gcgacggatc
      241 acgcgggagt cttcaatcgc gcgacggcct gaagtggtgt tgatgatgta ggtatattcg
      301 ccattcttga tgcggtcctg aatgtgcgga cggccttcat gcaccttgtt caccagacgc
      361 ggattaatgc ccgcttcgcc cagcacaatc gccgtgccgt gggtcgcatc cagctcgaag
      421 ccctgtttca gcagttttgc cgccaggtcc accacgcgtt ctttatcgcc ttcgcgcacg
      481 gaaagcaacg cacgaccgtg tttcttcatg gtggagttgc tgcccagctg cgctttggca
      541 aacgcttcag cgaaggtgcg gcccacgccc atcacttccc cggtggagcg catttctggc
      601 cctaacagcg ggtcaacacc cgggaattta ttgaacggca gcaccacttc tttcaccgag
      661 tagtacggcg ggataacttc tttggttacg ccctgctcag ccagcgattt gccagccatc
      721 acacgcgccg ccacttttgc cagcggtacg ccggtggctt tggagacgaa cggaacggta
      781 cgcgccgcac gcgggttaac ttcaatcagg tagacttcgt tgtttttcac cgcaaactgc
      841 acgttcatca gaccgcgcac ctgcaattcg aaggccagtt tctgcacctg ctggcgcatc
      901 acatcctgaa tttcctgact taaggtgtag gctggcagag aacatgcgga gtcaccggag
      961 tgcacgcccg cctgctcgat gtgctccatg atgccgccaa tcagcaccat ttcgccgtcg
     1021 cagatggcat ccacgtcaac ttctaccgcg tcatcaagga agtgatccag caacactggc
     1081 gcatcgttag acacgctgac cgccgtctgg aagtagcgac gcaggtcagc ttcgtcatag
     1141 acgatttcca tcgcccgacc gccgagaacg taagacggac gtaccaccag cgggtagcca
     1201 atctctttcg ccttctctac cgccatttca atagcggtaa cggtggcgtt cgccggttgt
     1261 ttcagtttca gacgctcaac cgcatgctgg aagcgttcac ggtcttctgc acggtcgata
     1321 gcatccgggc tggtgccgat aaccggtacg ccagcagctt ccagcgcgcg cgccagtttc
     1381 agcggggtct gaccgccgta ctgaacgata acgcctttcg gcttctcaat acgcacgatt
     1441 tccagcacat cttccagagt taccggctcg aagtagaggc gatcggaagt gtcgtagtcg
     1501 gtggagacgg tttccgggtt acagttaacc ataatggttt cgtaaccgtc ttcgcgcagc
     1561 gccagcgagg cgtgtacaca gcagtagtcg aattcgatac cctgaccgat acggttcggg
     1621 ccgccgccga gaaccatgat tttttcacgg tcggtagacg gattcgcttc gcactcttct
     1681 tcataagtgg agtacatgta agcggtgtcg gtggcgaact ctgccgcaca ggtatccacg
     1741 cgcttataaa ccgggtgcag gtcatactgg tcgcgcagct tgcggatttc cgcttcgcgc
     1801 acgcccgcca gttttgccag acgcgcatcg gcaaagcctt tgcgtttcag ctggcgcagg
     1861 aattcagcgt tcaggccagt gatgcccact tccgctactt tctcttccag acgcaccagt
     1921 tcttcaatct gtaccaggaa ccagcggtca atattggtca ggttgaacac gccgtccaca
     1981 gacaggcccg cacggaaggc atcggcgatg taccagatac gctctgcgcc agcatctttc
     2041 agttcgcgac ggattttggt taacgcttcc gggtcatcga ggctcacttt cgggtcgaat
     2101 ccagtcgcac cgacttccag gccgcgcagc gctttttgca gggattcctg ctgcgtgcga
     2161 ccaatcgcca tcacttcgcc aaccgatttc atctgagtgg tcagacggtc gttagcacca
     2221 gcgaattttt cgaagttgaa gcgaggaatt ttagtaacca catagtcgat ggacggctcg
     2281 aaggaggccg gagtacgtcc gccagtgatg tcgttcatca gttcgtcgag ggtgtaaccc
     2341 accgccagtt tcgccgccac tttagcaatc gggaaaccgg tcgctttcga cgccagcgcc
     2401 gaagaacggg acacgcgtgg gttcatttcg ataacaatca ggcgaccgtt tttcgggttc
     2461 accgcaaact ggacattgga accaccggtt tcaacaccga tttcacgcag caccgccatc
     2521 gaggcgttac gcatgatttg atattctttg tcggtcagcg tttgggctgg cgcgacagtg
     2581 atggagtcac cggtatggat gcccatcgca tcaaagtttt cgatagagca gacgatgatg
     2641 cagttgtcgt ttttatcacg caccacttcc atctcgtact ctttccagcc gatcagcgac
     2701 tcatcaatca gcagctcttt ggttggggag agatccagac cgcgggcgca aatttcttca
     2761 aactcttcgc ggttataagc gataccgccg ccgctaccgc ccatggtaaa ggatgggcga
     2821 ataatgcacg ggaagcccac gtcagcggca accgccagcg cttcttccat cgtgtgtgcg
     2881 ataccggaac gcgcggtttc cagaccaatt ttcttcatcg ctacgtcgaa acgacggcgg
     2941 tcttctgctt tatcaatcgc atcggcggtc gcaccaatca tagtcacgcc gaactcttcc
     3001 aacacgccct gacgctccag ctccagagcg cagttcagcg ccgtctgacc gcccatcgtt
     3061 ggcagcaccg cgtccgggcg ctctttttca ataatcttgc gtactacttc ccagtgaatc
     3121 ggctcgatgt aggtcgcatc ggccatttcc gggtcggtca tgatggtcgc cgggttggag
     3181 ttcaccagaa tgacgcggta accctcttcg cgcagggctt tacatgcttg cgcgccagag
     3241 tagtcaaact cacacgcctg accgataaca atcgggcccg cacccagaat caggatactt
     3301 tttatatctg tacgttttgg catggctctt ttactcctga ttacttagcg gttttacggt
     3361 actgctcaat taactcgata aagtggtcga acaacggcgc tgcgtcgtgt ggcccagggc
     3421 tggcttccgg gtgaccctgg aagctgaacg ccggtttatc agtgcgatga atgccctgta
     3481 acgtaccgtc gaacagggat ttatgcgtga cacgcaggtt tgcaggtaat gttgcttcat
     3541 ccaccgcaaa accgtggttc tgggcggtga tcatcaccac gtttttctcc acatctttaa
     3601 ccggatggtt gccgccgtgg tgaccaaatt tcattttgac agtcttcgca ccgctcgcca
     3661 gcgccagcag ctgatgaccg aggcagatgc cgaataccgg aatatcggtt tcgaggaatt
     3721 tctggatggc ggtaatggcg taatcgcacg gggccgggtc gccaggaccg ttggagagga
     3781 agatgccgtc tggattcatt ttcagcacat cttccgcaga agtttgcgcc ggaacgatgg
     3841 tcaggcgaca gcctctatcc accagcatcc gcaggatgtt gcgcttggca ccaaaatcat
     3901 aagccacgac gtggaacggc agctcgtctt cttttttcgc ttctggcagg ccgccggtca
     3961 acgtccagct cccttgtgtc cagctatagg cttctgcggt ggtcacttct tttgccagat
     4021 ccatgccatt cagacctggg aacgcgcggg ctttttctaa cgccaacgcc gcatccgggt
     4081 tatcgcctgc gataatgcag ccattctgtg cgcctttctc gcgcagtaaa cgcgtcagct
     4141 tacgggtatc gatatcggca atcgccacga tgttatggcg cttcaggtaa gaagagaggt
     4201 cttcggtatt acggaagttg ctggcaatca gcggcaggtc gcgaatcacc agaccttgtg
     4261 catgtacctg agaagattct tcatcggcgt cattagtgcc gacattgcca atatggggat
     4321 aagtaagagt aacgatttga cgagaatagg aaggatcagt gaggatttct tgataaccgg
     4381 tcattgaagt attgaaaacg acttccccaa ccgccgaacc tgttgcccct atggcccgac
     4441 cgtgaaactg ggttccgtct tccagaacca atagcgctga cttaatcaaa acaccctcca
     4501 gagaatattc actcacttta tttgcatatt aattcacaat gatgacgtaa atcaatgcaa
     4561 atctgcttac cgacgaattt ctggcaaacg gcggcattct ggagatatgg gcgctaaaag
     4621 tcaacttaat ggcgggattt tttatattat tttgtggctc atgcatgttt tacaggcatt
     4681 aagcgacaaa aagatcatat aacctgttct ggaaaacgct tgcacagcaa gaagattgca
     4741 tgaaataaaa gcgagcaggg aaaagtggac caaatggtca aattttacat taaaacaaca
     4801 aaaacagaag acaaaacatg taatttttgg cacttataga caatttaaaa acataacact
     4861 aaaaataaaa gggccaaaat taaagccctt tataatcaat aaattaaatg tgttattttt
     4921 gcaccataac aaatattttg tggttataaa ctattgagat caagcacatc tcgcatatca
     4981 aaaagaccac tttccttacc actcaaccac aaagccgatc ttaccgcgcc gttagcaaat
     5041 gtcatgcggc tggacgcctt atgggtgatc tccagacgct cgccaatatc ggcaaacatc
     5101 gcggtatgtt cgccaacgat gtcacctgca cgcacggtgg caaaaccaat ggtgccaggc
     5161 acacgttcac cggtgtggct ttcacgactg tagaccgcgc aatctttcag atctttatca
     5221 agggcgtggg cgatcgcctc tcccattgcc agtgcggtgc ctgacggcgc atcaacttta
     5281 tgtctatgat gtgcttcaat aatttcgata tcggtgtagt cacccatcac tttggctgct
     5341 ttctccagca gcttaagcat gacgttaacg ccaacgctaa aattggcggc aaagacaatc
     5401 gcaatatcgg cggcagcgtc acgaatcgcc tgtttaccgg cttcgtcaaa ccccgtagtg
     5461 ccgatcacca tccctttgcc atgctggcga caaaaagcga gatggttcag cgtaccttcc
     5521 ggacgggtaa aatctataaa cacatcaaaa tcatctttta ccgcatcgag gctgctttgc
     5581 acggtaacgc ctgttttccc tgcaccagcc agctcaccgg cgtcgctgcc cagtaaagaa
     5641 gatccttcgc gctccagcgc cgcgcccagc tgcacgcctt ctaatgccag cgccgcctga
     5701 atcaactggc ggcccatacg ccccccggct cccgcgatgg caacgcggat gtttgcatca
     5761 tgcatagcta ttctcttttg ttaatttgca tagaccgttt tcagagtaac cagcgcatcg
     5821 ctacgccgcc agccaaaaac gctgataatt agaaattaat gataaacagg gagggatatc
     5881 agtgaaaggc atgagtcgat gaatgactgc atgccgataa catgtgacag gttacgacgc
     5941 cagagccagc acctcagcca cccactgctg gaagcctttc acatccagat ccaatgccac
     6001 ctttacattg gctggtttgc ccaggcaacc gtcgatatca accaccgtcg tgcctgaggt
     6061 aaattcgccc tgagtttcca ctgccacaaa acacggtttg agagtgaaca attccgggcg
     6121 caccagccag gcaatagcgc aaagatcgtg catacgcagt ccactttgca tactgccgct
     6181 acggtagtgg ctaaacaggg cgtggagcat ttttccggtg cgattcaact ccggcaaagt
     6241 agcgagatag tcaggggtta atattgcctg attggtgaca tccagaccgc tcatgacgat
     6301 ttcgatgccg ctacggaaga cacaggcagc cgcttctgga tcggcagcga tattaaactc
     6361 ggcgtttggt gtgcagttgc cgcgaccagc agaaccgccc atgatcacca gacgacgaat
     6421 atacggttta cattccgggc attgtgaaag taacagcgca atattggtta acgggccgat
     6481 ggccaccagg gtaacgggct ctggtgcacg catcagggca tcccgaatcg ccagaaacgc
     6541 tggtatcccg agcggctttc ggttgtgctc aacaaagtcg tagccagcca ttcccgattc
     6601 gccgtgcaca gatgccgcat cacgcggtgc gcgtaccagc ggcacagcgg ctccctgggc
     6661 gagcggaatc tccgcattcc agaaatgcag cagttgcagg gcgttgcggg tggttttctc
     6721 aaccgagaca ttacccgcga cggtggtcat cagttgcagg tcgagttcgg gtgcaaaaat
     6781 cgcggcggca atggcgacgg catcgtcaat gccggggtca gtatcgagga agataggtaa
     6841 atgcatgttt tctccataaa aaatgccggt aacaagaccg gcattttcgc ataacttagg
     6901 ctgctaatga cttaatcgac ttcacgaata tcgacacgca gctctttcgg cacttcgaaa
     6961 acaatgtttt cttcacggcc ttccagcgga atggcttcac caccgcccag ctgctgcaaa
     7021 cgtgccacca cattctgcac cagaatatcc ggagccgatg cgcccgcagt cacgccgacg
     7081 catttaacct ctttcaccca ctcttcctgg atgtctttcg catcgtcaat caaaaacgcg
     7141 cgtttgccca tacgctgggc cagctccgcc agacggttgg agttggagga gtttttcgaa
     7201 ccgaccacca acacaacttc cgcctgttct gccagggcgc gtaccgcttc ctgacggtta
     7261 gtcgtggcgt agcagatgtc atctttgcgc ggaccgacaa ttttcgggaa gcgtttacgc
     7321 agcgcgtcga tcacatcaga cgtgtcatcc accgacagcg tggtctgggt cataaaggag
     7381 agcttctctt cgtttttgac cgtcagtttc cacacatcgt ccggcgattc gaccagatac
     7441 attccccctt ccgggttact gtactggccc attgtccctt ccacttccgg gtgcccggcg
     7501 tgaccgatga gaatagattc ttcgccacgg cgactggcgc gggcgacttc catatgcact
     7561 ttggtcacca gcggacaggt cgcgtcaaat accgtcaaat cgcgactttt tgcttcgtta
     7621 cgtaccgcct gagaaacacc gtgtgcggag aaaatcagga tcgcgccgtc cggtacttcg
     7681 ctaatctgct caataaagat agccccacgc tcacgcaagc tatcgaccac atagcggtta
     7741 tgtaccactt cgtgacggac atatatcggt gcgccgtaaa tggccagcgc gttttcaaca
     7801 atgctgatag cgcggtctac cccggcacaa aaaccacgcg ggttggccaa caggatctgc
     7861 atgttacgcc tccaatgccg gatcgatttc cagcacttca atatcaaaat gaacggtctg
     7921 cccggccaga ggatggttga aatcaacggt aatggagtcg ccgttaattt cgcggatcac
     7981 gccaggcatc tcactgccat ccattgcggt aaaaagcatg attgcgccaa tttctggctc
     8041 gcctgcatcc ataaattcac ggcgggagaa gtactgaatc aggtccggtg acggcacgcc
     8101 aaacgccgca tctggctcca acgagaaggt ggttttatcg cccactttca gccccaacag
     8161 gtgttgctcc agcccttcag aaagagaagc atcacccagg cggaacagcg ccggtttacc
     8221 gttgttgcgg gtagactcgg cggtggtgcc atcgtcgagt tttagcgtga agtgcaccag
     8281 gacggcgcta ttgctctgta cagattcaga catgcaggtt tgctcttata tttgaggatt
     8341 tttgccggat gcggcgtaaa cgccttatcc ggcagggttt attattgttt tttcgctcta
     8401 gaaggcaaaa aaccttccag cacaatcagt gccgcaccga cacagatggc agtatcggca
     8461 aggttgaagg tggcgaagtg ccagtcgccg acgtagaagt cgatcatatc gacaacgaag
     8521 ccgtgccaca ggcggtcgaa caggttgccc agcgcgccgc caataatcag cgcgtaagcg
     8581 atattgttta gcttctgcgt ggccttcgag cgatacatca tcactgccag gatcacgcta
     8641 ataccaatcg caataccggc aaagaaccaa cgctgccagc cgccgctatc ggcaaggaaa
     8701 ctaaacgccg cgccatagtt acgcgcataa tgcagattaa gcgacgggaa cagcgggacc
     8761 gtatccccca gagcaaagtt ctggaggatc aggtatttgc tgcccagatc gataatcagc
     8821 acgactacca ccagccacag ccagcgtagc cctgttgaac agatcgattg actcatcagg
     8881 caaacttacg tttttcaccg tcaccggcga cgttgctgac acagcggccg cagatttctg
     8941 cgtgttccgc caccttgccg acatcctggg tgtagtgcca gcagcgtggg cacttctcac
     9001 cttcggcttt actcaacgcg actttcagcc ctttgagtac ttcgctctgc tgagcatcag
     9061 caggtgcgtc gtgatagtct gcaacggtag cgccggaggt caacaggaca aatcgtaatt
     9121 catcgcccag cgcggtcagt ttcgccgcca gttccggttc tgcatacaag gttactgccg
     9181 cttccagcga gccacccact ttcttgtcgg cacgcgcttg ctcaatgact ttgttcactt
     9241 cgccacgcac tttcaacagc tcgtcccaga acgcatcgtt catcgcttcg ctgtctgcca
     9301 ggccaaacag gccttcgtac cactcaccgg tgaagacgta tttttcacgt tcgcccggca
     9361 ggtagcccca cacttcatca gcggtgaagg agaggattgg tgccatccag cgcaccagcg
     9421 cttctgcgat gtgatacagc gcagtctggc agctacgacg cgccacactg tccgctttgg
     9481 cggtgtactg acggtctttg atgatgtcga ggtagaagga acccatctca acggagcaga
     9541 agcgcatcag acgctgtacc acttcgtgga aatcgtatgc ttcgtacgcc ttgaggatgt
     9601 cttcctgtgc cgctttcgca caacctacgg cccagcgatc cagtaccacc atctcttccg
     9661 gtttcaccat atcttttgct ggatcaaaac cgttcaggtt tgccagcagg aagcgcgcgg
     9721 tgttacggat acgacgatag ctatcggcag cacgtttcag gatctcgtca gaaacggcca
     9781 tttcaccggt gtagtcggtt gatgccaccc acagacgcag aatatccgcg cccagtttgt
     9841 tcatcacatc ctgcggcgaa acggtattgc cgatggattt agacatcttg cggccctgac
     9901 catccacggt aaagccgtgg gtcagtacct gacgatacgg cgctttgcct ttcatcgcgg
     9961 tggagatcat tagggaagac atgaaccaac cacggtgctg gtcagaacct tccagataca
    10021 tgtccgctgc gtgaccggca aattccggac gcacgtcaac aacagaagag tgggtagatc
    10081 cggagtcaaa ccatacatcc aatgtgtccg gcactttcac gtactgatca gcttcatcgc
    10141 cgaggatctc tttcgcatca agatcccacc acgcctggat gccgtcaact tcaacgcgtt
    10201 ttgccacttc ttccattagt tcgagagtac gcggatgcag ctcttccgtg tctttgtgca
    10261 cgaacagtga catcggtacg ccccaggtgc gctgacggga gatacaccag tcaggacggt
    10321 tagcaaccat cgactcgata cgcgcctggc cccagtccgg gatccactgc acgcctttga
    10381 tctctttcag tgactgcgca cgcagacctt tctgatccat gctgacgaac cactgcggcg
    10441 tcgcgcggaa gatgatcggc gttttgtgac gccagcagca cggatagctg tgctgcattt
    10501 tctcaacgtg cagcagcgcg cctttttcct gcagcagcgc aacgacgatg tcgttcgctt
    10561 tgaagacgtt cacgccatcc agcgtcggat aagtgcccgg cagataagtg ccgtccgggc
    10621 caaccgggtt agcggtttcc aggccgtatt tctgaccgat cacatagtcg tccgggccgt
    10681 ggccaggcgc ggtgtgaacg gcaccggtac cggcatccag ggtaacgtga tcgccgagga
    10741 ttgccggaac gtcgaagccc ataaacggat gggtaaagcg cagcaactca agctccgcac
    10801 cttttaccgt gccgagaatg gtgtaatcgg tcacgccgat acgctgcatt acgctttcaa
    10861 ccagatcttt cgccagaatc acggcctgac cgtcgatctg caccagcgca tagtcgaaat
    10921 caggtgcaat agagattgcg cggttcgcag gcagagtcca cggcgtagtg gtccagatca
    10981 ccagcgagat tgggccgtta acgttgctta cggcaaattt tgctttcagt gcatcctgat
    11041 cgaccgcctg aaaagcaacg tcgatggacg gagaagtttt gtcgtaatac tcaacttccg
    11101 cttccgccag cgcagaacgg cagtcaacgc accagtgtac cggcttcgcg cctttgtgca
    11161 ggtgaccgtt gccgatgatt ttgcccagcg cgcggatgat gttggcttca gttttgaagt
    11221 ccatggtcag gtacgggtgc gaccagtcgc ccagcacgcc cagacggata aagtctttgc
    11281 gttgaccgtc aacctgggtc gccgcgtatt cgcggcactt ggcgcggaac tcggcggcgg
    11341 tgaatttctc acccggctta ccgtattctt gctctacttt cagctcgatc ggcagaccgt
    11401 ggcagtccca gccaggcaca tacggcgagt cataaccgga aagccctttg gacttcacga
    11461 taatgtcttt cagaatcttg ttaaccgagt gaccaatatg aatgctgcca ttcgcataag
    11521 gagggccatc atgcagaatg aaggtttttt tgcctttttt agccgcacgg atgatgccgt
    11581 acagatcatc atcagtccaa cgcgccagca ttcccggttc gcgcttggcg agatcgccac
    11641 gcatcgggaa ccctgtttcc ggcaaattca gggttgattt atagtcactc atcagattct
    11701 cggttccgtg tttcggtttg attacataac aggcttaagc cggttttgtt agcccaaaaa
    11761 attcgcgggc ggttaattca tcacgcgcaa tctgcgcttt cagttcgtcc agcgacgcaa
    11821 atcgctgctc attgcgtatt tttttacgca gcactacttg tatatggcga ccgtaaaggt
    11881 ccattgcaac atctaacaaa tgcacttcca gctgctggcg aataccggca accgttgggc
    11941 gtgttccgat gtttgccacg ccgggtaacg gcttttcacc gaggcccagc acttctacca
    12001 cataaacccc tttcaccggg gaaacctgac ggcgtagcgg tacattcgcc gtcgggaaac
    12061 ctatagtgcg ccctaattca tcaccgtgga ctacacgccc ggagatggca aacgggtgcc
    12121 ccagtaaact ttctgccaga gccagattgt catccgccag cgcctgacgc acagcggtgc
    12181 tgctaatacg cacgccacct tcgcaaaaag tttgcgtact agtgatatcg aagccgtatt
    12241 ccatgccagc tttctgtaat aacaagaaat cgccttcacg accagcgcca aagcggaaat
    12301 catcccctac ggcaagaaat tttacgcgca aatgcttcac cagaagatcg ctgatgaaat
    12361 tttgcgcggt taacgccgcg aaacgcctgt cgaaacgcac gcacagcacg taatcaacgc
    12421 cacactctgc aaggtaacgc agtttttccc gcagccgggt cagtcttgcc ggggctttat
    12481 cggtagcaaa cagttccagt ggttgaggtt caaaaagcat caccatcacc ggtaagttgc
    12541 gcttgcgccc ttcttcctgc aagccctgta acagcgcgcg atgaccgcga tgcacgccgt
    12601 cgaaattacc aatagtcagc acacaccctt cttgcggggc ctggctgaga ttatgtatgc
    12661 cgcgtatcag cttcatgtct ggctcaaaac agtgaaaatc gtccgagtat accttgtaca
    12721 gcggtcaagg ttaaccggcg attgagtacc gaaatcagaa agaagtggct tttcattgcc
    12781 atggcgcaaa tcacgggaag aaagtgaccg cctgctgcaa tttttatcgc ggaaaagctg
    12841 tattcacacc ccgcaagctg gtagaatcct gcgccatcac tacgtaacga gtgccggcac
    12901 attaacggcg cttatttgca caaatccatt gacaaaagaa ggctaaaagg gcatattcct
    12961 cggcctttga attgtccata tagaacacat ttgggagttg gaccttggct aatatcaaat
    13021 cagctaagaa gcgcgccatt cagtctgaaa aggctcgtaa gcacaacgca agccgtcgct
    13081 ctatgatgcg tactttcatc aagaaagtat acgcagctat cgaagctggc gacaaagctg
    13141 ctgcacagaa agcatttaac gaaatgcaac cgatcgtgga ccgtcaggct gctaaaggtc
    13201 tgatccacaa aaacaaagct gcacgtcata aggctaacct gactgcacag atcaacaaac
    13261 tggcttaatc gccaatttgc tgaagctttg tgaaaaagcc cgcgcaagcg ggttttttta
    13321 tgcctgctgc ttttatgatg cgtgagagaa cacactaccg gttgccagat agtcaaaaga
    13381 tgctggcttt tgcagacacg ccgttacact ttctgaactc ttcgtggctt aagaatcgta
    13441 gaaccatcgg ctgatacatt ctgaacaaga atatctact
//
LOCUS       DADMIB010000114        13446 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.114, whole genome shotgun sequence.
ACCESSION   DADMIB010000114 DADMIB010000000
VERSION     DADMIB010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13446
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.114"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            127..942
                     /locus_tag="JNZ89_003031"
     CDS             127..942
                     /locus_tag="JNZ89_003031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HAY8936827.1"
                     /translation="MAQINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA
                     DKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASA
                     SFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG
                     SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQG
                     RGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR"
     gene            1070..1651
                     /gene="sodB"
                     /locus_tag="JNZ89_003032"
     CDS             1070..1651
                     /gene="sodB"
                     /locus_tag="JNZ89_003032"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020079002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HAY8936828.1"
                     /translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK
                     GTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFG
                     SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE
                     HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA"
     gene            complement(1797..2966)
                     /locus_tag="JNZ89_003033"
     CDS             complement(1797..2966)
                     /locus_tag="JNZ89_003033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8936829.1"
                     /translation="MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGM
                     LISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRIL
                     TSLNHGAFFGLGSVVAASVEPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRM
                     SFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMF
                     TLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYPGGKLADRSVNGTLKGFLLLL
                     MVIMLAIPFLARNEFGAAISMVVWGAAAFAVVPPLQMRVMRVASEAPGLSSSVNIGAF
                     NLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS"
     gene            complement(3132..3221)
                     /gene="ynhF"
                     /locus_tag="JNZ89_003034"
     CDS             complement(3132..3221)
                     /gene="ynhF"
                     /locus_tag="JNZ89_003034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein YnhF"
                     /protein_id="HAY8936830.1"
                     /translation="MSTDLKFSLVTTIIVLGLIVAVGLTAALH"
     gene            3520..4545
                     /gene="purR"
                     /locus_tag="JNZ89_003035"
     CDS             3520..4545
                     /gene="purR"
                     /locus_tag="JNZ89_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HAY8936831.1"
                     /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
                     YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
                     KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVID
                     NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ
                     GDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDN
                     VRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADG
                     PFRDYRR"
     gene            complement(4542..5474)
                     /locus_tag="JNZ89_003036"
     CDS             complement(4542..5474)
                     /locus_tag="JNZ89_003036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8936832.1"
                     /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
                     AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV
                     RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF
                     RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
                     VVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND
                     MSPALTWLLEYLGDSETLNKEWLREPEETPATGD"
     gene            5587..6798
                     /locus_tag="JNZ89_003037"
     CDS             5587..6798
                     /locus_tag="JNZ89_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HAY8936833.1"
                     /translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS
                     ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF
                     VQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQ
                     AIFATLFAITVVLILPIFWLKPTTKAGNNSQDGLTFTDLLRSKTYRGNVLIYAACSAS
                     FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV
                     LFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA
                     LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEAGCQNH
                     GNAEVAHSESH"
     gene            7089..8237
                     /gene="cfa"
                     /locus_tag="JNZ89_003038"
     CDS             7089..8237
                     /gene="cfa"
                     /locus_tag="JNZ89_003038"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HAY8936834.1"
                     /translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP
                     DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGAR
                     LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC
                     EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSMVGVTISAEQQKMAQERCEGLDVTIL
                     LQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN
                     VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE
                     IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR"
     gene            complement(8277..8918)
                     /gene="ribE"
                     /locus_tag="JNZ89_003039"
     CDS             complement(8277..8918)
                     /gene="ribE"
                     /locus_tag="JNZ89_003039"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HAY8936835.1"
                     /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAH
                     NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH
                     IMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
                     LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA"
     gene            9133..10506
                     /gene="mdtK"
                     /locus_tag="JNZ89_003040"
     CDS             9133..10506
                     /gene="mdtK"
                     /locus_tag="JNZ89_003040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MdtK"
                     /protein_id="HAY8936836.1"
                     /translation="MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDM
                     AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLI
                     MLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
                     MVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSM
                     RDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI
                     ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTV
                     SLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITF
                     TAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVI
                     ILQRASR"
     gene            complement(10547..11803)
                     /locus_tag="JNZ89_003041"
     CDS             complement(10547..11803)
                     /locus_tag="JNZ89_003041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936837.1"
                     /translation="MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENT
                     VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRH
                     PEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
                     LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT
                     DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA
                     PVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINL
                     NGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITD
                     ASRQTLCNALKLQPDEDGIGATLQPA"
     gene            12111..12187
                     /locus_tag="JNZ89_003042"
     tRNA            12111..12187
                     /locus_tag="JNZ89_003042"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12145..12147,aa:Val,seq:gac)
     gene            12192..12268
                     /locus_tag="JNZ89_003043"
     tRNA            12192..12268
                     /locus_tag="JNZ89_003043"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12226..12228,aa:Val,seq:gac)
     gene            12376..12681
                     /locus_tag="JNZ89_003044"
     CDS             12376..12681
                     /locus_tag="JNZ89_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HAY8936838.1"
                     /translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES
                     EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA"
     gene            12807..>13446
                     /locus_tag="JNZ89_003045"
     CDS             12807..>13446
                     /locus_tag="JNZ89_003045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936839.1"
                     /translation="MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPY
                     SDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILL
                     GEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI
                     ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQ"
BASE COUNT         3315 a         3467 c         3204 g         3460 t
ORIGIN      
        1 tcgccaacga aacgtatttt ttaacaataa aagctattaa ctttctcttc ttctatgcat
       61 tagaatcatc aagttttgta aatcagacgc aggcatgata gacctgcctt aacagaggga
      121 cgctcagtgg cgcagataaa ccgtatttcg atcacgctct gtgctttact ttttaccacc
      181 ctgcctttaa cgcctatggc ccatgcttca aagcaagcca gggagagttc tgctaccact
      241 catatcacca aaaaagcaga taaaaagaaa agcacggcaa ccaccaaaaa gacccagaaa
      301 acagcgaaaa aagccgccag taaaagtacg accaaaagca aaaccgcttc ttccgttaaa
      361 aaatcttcca ttaccgcttc taaaaacgcc aaaactcgca gcaaacacgc cgtcaataaa
      421 acggcctcag ccagctttac cgaaaagtgt accaaacgta agggctataa atcgcattgt
      481 gtgaaagtca aaaatgccgc gtcaggaact cttgccgacg cgcacaaagc gaaggtgcaa
      541 aaagctacga aagtggcaat gaataaactg atgcagcaaa ttggtaagcc atatcgttgg
      601 ggtggcagct caccgcgtac cggttttgat tgcagcggcc tggtttatta cgcttataaa
      661 gatttggtga aaattcgtat tccgcgtacg gcgaatgaaa tgtatcacct gcgtgatgca
      721 gcgccaatcg aacgtagtga actgaaaaac ggcgacctgg tctttttccg tactcaggga
      781 cgcggcacag ccgatcatgt cggcgtgtat gtcggcaacg gcaaatttat tcagtcaccg
      841 cgcacaggtc aggaaattca aatcacctct ctcagtgaag actactggca gcgccactat
      901 gttggcgctc gtcgggtaat gaccccaaaa acacttcgct aaaactttac cctgttgtta
      961 cggcaacagg gtaagttcat cttttgtctc accttttaat ttgctaccct atccatacgc
     1021 acaataaggc tattgtacgt atgcaaatta ataataaagg agagtagcaa tgtcattcga
     1081 attacctgca ctaccatatg ctaaagatgc tctggcaccg cacatttctg cggaaactat
     1141 cgagtatcac tacggcaagc atcatcagac ttatgtcact aacctgaaca acctgattaa
     1201 aggtaccgcg tttgaaggta aatcactgga agagattatt cgcagctctg aaggtggcgt
     1261 attcaacaac gcagctcagg tctggaacca tactttctac tggaactgcc tggcaccgaa
     1321 cgccggtggc gaaccgactg gaaaagtcgc tgaagctatc gccgcatctt ttggcagctt
     1381 tgccgatttc aaagcgcagt ttactgatgc agcgatcaaa aactttggtt ctggctggac
     1441 ctggctggtg aaaaacagcg atggcaaact ggctatcgtt tcaacctcta acgcgggtac
     1501 tccgctgacc accgatgcga ctccgctgct gaccgttgat gtctgggaac acgcttatta
     1561 catcgactat cgcaatgcac gtcctggcta tctggagcac ttctgggcgc tggtgaactg
     1621 ggaattcgta gcgaaaaatc tcgctgcata ataactgatg gcaaatgcag cattgcctga
     1681 tgcgcttcgt ttaccatgcc aacgcggatg aggcgttaac agcgcattcg gcaagataaa
     1741 tcgcacgttg tcagcaactg taacgcagaa ggttatcctt ctgcgttttt gtttaattag
     1801 ctgttagcaa cgcaaactgt ttcaggttgt tttctggctg acataaacac cagcaataat
     1861 gccagtcccg cgacaatcgc tcccatcacc ggcacaaagc tgtatcccag cccagcggaa
     1921 attaccgcac caccagcagc tgctcccagc gcatttccaa gattaaaggc accaatattg
     1981 actgatgaag acagacctgg cgcttcactg gcgacacgca tcacgcgcat ctgtaacggc
     2041 ggtacgaccg caaaggctgc tgcgccccac accaccatgc taatagctgc gccgaactca
     2101 ttgcgggcca ggaacgggat tgccagcata atcaccatca acaacaacaa aaagcctttc
     2161 aacgtgccgt taactgaacg atctgccagt ttgccgccgg gatagttacc gatagagaat
     2221 ccgacaccaa tcagcaccag cattgccgtg acgaacaccg gtgttgcgtg ggtaatactt
     2281 tgcagtaccg gagagatata ggtgtagaga gtaaacattg caccagctcc cagtaccgtc
     2341 gtcagcaatg cagacaacac ctgcggacgc attaataccg ccagctcttt tttcacttca
     2401 ggtcgtgccc ctgcaccacc tttaggtaat gagaagaaca gacttaccat tgaaatcact
     2461 cccagccccg ccgttgccag aaatgacatc cgccagccga tggtttcacc caaccaggtc
     2521 gccgccggca cgccaccgat atttgccagg gttaacccca taaacatagt ggcaactgcg
     2581 ctggcctgtt tatgttttgg ctccacgctt gcggccacga ctgaacccaa accaaaaaat
     2641 gctccgtgat tcaggctggt caaaatgcgt gaaagcatca gggtcatata atccggcgcg
     2701 atggcggaaa gtacgttgcc gagcgtgaaa attgccatca ggaaaatcaa cgcactgcgg
     2761 cgggcacgat gagaaagtag aagcgtcatc agcggcgcgc caaccattac gccaactgca
     2821 taggcactga ttaacattcc ggcagcggga atcgagacat ccacaccgcg cgcaatgacg
     2881 ggcaacaagc ccattggcga gaactccgtt gtcccgatac caaacgcgcc aatcgccaga
     2941 gccagcaacg gatagttaat tttcatgcct tatctccacc tcttcgcgtc attacgcgat
     3001 attcattaaa gtggcgaaag catgacagca atcacaaaaa aatgaaaata acaaaaagag
     3061 aaaacacttt tgccattttg ctaacaaaca ggaaggagat gcgagggaga acgcgctccc
     3121 tcgagaggaa atcagtgcag cgcggcagtc aaacccacgg ccacgatcaa accgaggacg
     3181 ataatcgttg ttaccagtga aaatttaagg tcggtgctca tcaagttttc tcctttttta
     3241 ttaccacaca aatagtgata ttacgcattt ttacacactg tgatgaaaaa atctcccgtc
     3301 atttataatg ataagtgttt ttaccacttc cccttttcgg caagatcggc caaaattcca
     3361 cgcttacact atttgcgtac tggccattga ccccttcctg acgctccgtg tcgtttttcc
     3421 ggcgtaccgc aacacttttg ttgtgcgtaa ggcgtgtaaa ggcaaacgtt taccttgcga
     3481 ttttgcagga gctgaagtta gggtctggag tgaaatggaa tggcaacaat aaaagatgta
     3541 gcgaaacgag caaacgtttc cactacaact gtgtcacacg taatcaacaa aacacgtttc
     3601 gtcgctgaag aaacgcgcaa cgccgtgtgg gcagcgatta aagaattaca ctactcccct
     3661 agcgcggtgg cgcgtagcct gaaggttaac cacaccaagt ctatcggttt gctggcgacc
     3721 agcagcgaag cggcctattt tgccgagatc attgaagcgg ttgaaaaaaa ttgcttccag
     3781 aaaggttaca ccctgattct gggtaatgcg tggaacaatc ttgagaaaca gcgggcttat
     3841 ctgtcgatga tggcgcaaaa acgcgtcgat ggtctgctgg tgatgtgttc tgagtaccca
     3901 gagccgttgc tggcgatgct ggaagagtat cgccatatcc caatggtggt gatggactgg
     3961 ggtgaagcaa aagctgactt caccgatgcg gtcattgata acgcgttcga aggcggctac
     4021 atggccgggc gttatctgat tgaacgcggt caccgcgaaa tcggcgtcat ccccggcccg
     4081 ctggaacgta acaccggcgc aggccgcctt gccggtttta tgaaggcgat ggaagaagcg
     4141 atgatcaagg tgccggaaag ctggattgtt cagggtgact ttgaacccga atctggttat
     4201 cgcgccatgc agcaaatact gtcgcagccg catcgcccta ctgccgtctt ctgtggtggc
     4261 gatatcatgg caatgggcgc actttgtgct gctgatgaaa tgggtctgcg cgtcccgcag
     4321 gatgtttcgc tgatcggtta tgataacgtg cgcaacgccc gctattttac gccggcgctg
     4381 accacgatcc accagccaaa agattcgctg ggtgaaacag cgttcaacat gctgttggat
     4441 cgtatcgtca acaaacgtga agaaccgcag tccattgaag tgcatccgcg cttgattgaa
     4501 cgccgctccg tggctgacgg cccgttccgc gactatcgtc gttaatcacc cgttgcggga
     4561 gtctcttccg gctcccgcag ccactcctta ttcagcgtct cactatcgcc gagatactca
     4621 agcagccagg ttaacgcagg cgacatatca ttttgctgcc atgtcagaca acatgccgaa
     4681 tccgggaagg ggttttccaa ttcaagtgct acccacttcc cctcattaag ccacggtttg
     4741 gcgaaatgtg ttggcaccat ccctatgcat aatcctgccg agatacaggt tgccgatgat
     4801 tcccagtcag gcacgacaac tcttttttgg ttatccagta accaggtaat acgtttaggt
     4861 agcgttcgcg aggtgtcttc gcgcaccaac gacggccagt tgcgcaacgt atcatcgctg
     4921 aatgggccat ccatcaacgc cagcgggtgg tggctggcaa caacgcaact ccagcttagc
     4981 atccccatat cccggaaggc ataacgaccg cctaccggaa tcgcgcgtgt tgcgccaatc
     5041 gccagttcca cgcgcccgtc ggaaagcgca tcccagacac cgttgaacac ttcctgaaag
     5101 acaagaagtt cgacatcatc aaaatggcga taaaaatcaa cgatcatctg ccgtgtacgt
     5161 tctggcctga caatattatc cactgcgata gctaactgac cgcgccagcc gttcgctatc
     5221 tgctgacatt gctggcgggt gatctgcatt tttttgacaa cagagcgccc ttctttgaga
     5281 aaccacgctc cagcagcggt cagctccaca tcacggtgcc gtcgttcaaa gagcggcacc
     5341 gccagccact cttccagctg acgcacggta tagctgaccg cagaaggaac gcgatgcagc
     5401 tcctgtgccg cagcgctaaa actaccatta cgcgctaccg catcaacaac ttcgagtgaa
     5461 tattctgacc acatagtctg cctgcaaaat ttttgaaatc agtcatcaaa tattaccgtt
     5521 tcacaacact aatttcactc cctacacttt gcggcggtgt ttaattgaga gatttagaga
     5581 atatacatgc aacctgggaa aagattttta gtctggctgg cgggtttgag cgtactcggt
     5641 tttctggcaa ccgatatgta tctgcctgct ttcgccgcca tacaggccga cctgcaaacg
     5701 cctgcgtctg ctgtcagtgc cagccttagt ctgttccttg ccggttttgc cgcagcccag
     5761 cttctgtggg ggccactctc cgaccgttat ggtcgtaaac cggtgttatt aatcggcctg
     5821 acaatttttg cgttaggtag tctggggatg ctgtgggtag aaaacgccgc tacgctgctg
     5881 gtattgcgtt ttgtacaggc tgtgggtgtc tgcgccgcgg cggttatctg gcaagcgtta
     5941 gtgacggatt attatccttc acagaaagtt aaccgaattt ttgcgaccat catgccgctg
     6001 gtgggtctat ctccggccct ggctcctctg ttaggaagct ggctgctggt ccatttttcc
     6061 tggcaggcga ttttcgccac cctgtttgcc attaccgtgg tgctgattct gcctattttc
     6121 tggctcaaac ccacgacgaa ggccggtaac aatagtcagg atggtctgac ctttaccgac
     6181 ctgctacgtt ctaaaaccta tcgcggcaac gtgctgatat acgcggcctg ttcagccagt
     6241 ttttttgcat ggctgaccgg ttcaccgttc atccttagtg aaatgggcta cagcccggca
     6301 gttattggtt taagttatgt cccgcaaact atcgcgtttc tgattggtgg ttatggctgt
     6361 cgcgccgcgc tgcagaaatg gcaaggcaag cagttattac cgtggttgct ggtgctgttt
     6421 gctgtcagcg tcattgcgac ctgggctgcg ggcttcatta gccatgtgtc gctggtcgaa
     6481 atcctgatcc cattctgtgt gatggcgatt gccaatggcg cgatctaccc tattgttgtc
     6541 gcccaggcgc tgcgtccctt cccacacgca actggtcgcg ccgcagcgtt gcagaacact
     6601 ctacaactgg gtctgtgctt cctcgcaagt ctggtagttt cctggcttat tagtatcagc
     6661 acgccattgc tcaccaccac cagcgtgatg ttatcaacag tagtgctggt cgcgctgggt
     6721 tacatgatgc aacgttgtga agaagctggc tgccagaatc atggcaatgc cgaagtcgct
     6781 catagcgaat cacactgatc tatatcgata tacttatact taggctgcta acaaaatttt
     6841 gttgtatgat tgaaattagc ggcctatact aatttcgagt tgttaaagct acgataaata
     6901 ttatgttttt acggggacag gatcgttccc gactcactat ggatggtcat ttcggcaagg
     6961 gttcctcctt tccctctgtt ctacgtcgga ttatagactc gcggtttttt ctgcgagatt
     7021 tctcacaaag cccaaaaagc gtctacgctg ttttaaggtt ctgatcaccg accagtgatg
     7081 gagaaactat gagttcatcg tgtatagaag aagtcagcgt accggatgac aactggtacc
     7141 gtatcgccaa cgaattactt agccgtgccg gtatagccat taacggttct gccccggcgg
     7201 atattcgtgt gaaaaacccc gattttttta aacgcgttct gcaagaaggc tctttggggt
     7261 taggcgaaag ttatatggat ggctggtggg aatgtgaccg actggatatg ttttttagca
     7321 aagtcttacg cgcaggtctc gagaaccaac tcccccatca tttcaaagac acgctgcgta
     7381 ttgccggcgc tcgtctcttc aatctgcaga gtaaaaaacg tgcctggata gtcggcaaag
     7441 agcattacga tttgggtaat gacttgttca gccgcatgct tgatcccttc atgcaatatt
     7501 cctgtgctta ctggaaagat gccgataatc tggaatctgc ccagcaggcg aagctcaaaa
     7561 tgatttgtga aaaattgcag ttaaaaccag ggatgcgcgt actggatatt ggctgcggct
     7621 ggggcggact ggcacactac atggcatcta attatgacgt aagcatggtg ggcgtcacca
     7681 tttctgccga acagcaaaaa atggctcagg aacgctgtga aggcctggat gtcaccattt
     7741 tgctgcaaga ttatcgtgac ctgaacgacc agtttgatcg tattgtttct gtggggatgt
     7801 tcgagcacgt cggaccgaaa aattacgata cctattttgc ggtggtggat cgtaatttga
     7861 aaccggaagg catattcctg ctccatacta tcggttcgaa aaaaaccgat ctgaatgttg
     7921 atccctggat taataaatat atttttccga acggttgcct gccctctgta cgccagattg
     7981 ctcagtccag cgaaccccac tttgtgatgg aagactggca taacttcggt gctgattacg
     8041 atactacgtt gatggcgtgg tatgaacgat tcctcgccgc atggccagaa attgcggata
     8101 actacagtga acgctttaaa cggatgttta cctattatct gaatgcctgc gcaggtgctt
     8161 tccgcgcccg tgatattcag ctctggcagg tcgtgttctc acgcggtgtt gaaaacggcc
     8221 ttcgagtcgc tcgctaaagg ctattctatc gccccctctc cgggggcgat ttcagatcag
     8281 gcttctgtac ctggttgatt catggcattt tctcgtgccg ccagcacacg ttctaccgta
     8341 tctaccactg cctgagtttg tggatcaatt tcaatgttga cgcgtgcgcc gagttttttc
     8401 ttcccaagag tcgtgcgttc cagagtttcc ggaattaaat ggacgcaaaa acgcgttggc
     8461 gtgacttcgc cgacggtcag gctaataccg tcgatgccaa taaatccttt gtacaggata
     8521 tatttcatca actgactatc ctggacttta aaccagatct ggcgattatt ttccgaggtt
     8581 aatattttcg ccacttcagc ggtggtcata atatgacctg acattaagtg tccgccaatt
     8641 tcatcactga atttcgccgc acgctcaacg tttacccaat cccccacttt taaatcgcca
     8701 agattggtaa tgcgtaacgt ttctttcatc aggtcaaaac tgacatggtt gccgttaatt
     8761 tccgtcacgg tcaggcagca accgttatgc gccacggaag caccggtttc caggccgtcc
     8821 agcatgtggt cgggtaactc caccacatgc gtacgaaaat ttggtttctc gtcaatcgac
     8881 accagttttg cggtgccctg tacaatcccc gtaaacatac ttacaactcc tgaaatcagt
     8941 taagacattc tgttcagcac aatagcaggt ggcaaacgcc cttaccagtg aaggggtaag
     9001 aatgactatt ttttcactgg agaattaata aatcctcgct acaatagact gaatttcccc
     9061 tgcttcttct ttttgctgcc cattcaggcg gctttttagt ctctcatata actacaaata
     9121 aaaggtgttc acgtgcagaa gtatatcagt gaagcgcgtc tgttattagc attagcaatc
     9181 ccggtgattc tcgcgcaaat cgcccaaact gcgatgggtt ttgtcgatac cgtgatggcg
     9241 ggcggctata gtgccaccga catggcggcg gtcgctatcg gtacttctat ctggcttccg
     9301 gcgatcctct ttggtcacgg actgctgctg gcattaacgc cggttatcgc gcaattaaat
     9361 ggttccggtc gacgtgagcg cattgcgcat caggtgcgac aaggtttctg gctggcaggt
     9421 tttgtttccg ttctcattat gctggtgctg tggaatgcag gttacattat ccgctccatg
     9481 gaaaacatcg atccggctct ggcggacaaa gccgtgggtt atctgcgtgc gttgttgtgg
     9541 ggcgcgccgg gctatctgtt cttccaggtt gcccgtaacc aatgtgaagg tctggcaaaa
     9601 accaagccgg gtatggtaat gggctttatc ggcctgctgg tgaacattcc ggtgaactat
     9661 atctttattt atggtcattt cggtatgcct gagctcggtg gcgttggttg tggcgtggct
     9721 actgcggcgg tgtattgggt catgttcctt gccatggttt cttacattaa acgcgcccgc
     9781 tccatgcgcg atattcgtaa cgaaaaaggc accgcgaaac ccgatcctgc ggttatgaaa
     9841 cgactgattc aactcggttt accgattgcg ctggcactat tctttgaagt gacactgttt
     9901 gccgtcgtgg ctctgttagt gtctccgctc ggtattgttg atgtcgcagg acaccagatt
     9961 gccctgaact ttagttcact gatgtttgtg cttccaatgt cgctggcggc agcggtaact
    10021 atccgcgtag gttatcgtct gggtcagggc tcaacgctgg atgcgcaaac cgctgcgcgg
    10081 accgggctta tggtgggtgt ctgtatggca accctgacgg ccattttcac ggtttcactc
    10141 cgggagcaaa tcgccctgtt gtacaacgac aatcccgagg ttgtaacgct ggctgcgcat
    10201 ttgatgttgc tggcggcggt atatcagatt tctgactcaa tccaggtgat tggcagtggg
    10261 attttgcgtg gttataaaga tacgcgttcc attttctata tcacctttac agcttactgg
    10321 gtgctgggct tgccaagcgg ctatattctg gcactgaccg atctggtcgt tgaacctatg
    10381 gggccagcag gcttctggat aggctttatt atcggcctga catcggcagc cattatgatg
    10441 atgttgcgta tgcggttcct gcaacgtctg ccgtcagtta tcattctgca acgagcatcc
    10501 cgctaataaa gacaaggcgc aaccttcacg ggttgcgcct gtgtttttac gcaggctgga
    10561 gcgttgcgcc aatcccgtct tcgtctggct gtaatttcag agcgttgcac agagtttgcc
    10621 gactggcatc tgttatctca acgtgtatat caccggtaac ttcccctttc acattgatga
    10681 agtcaggtga gatttctttc gcactggttt gcaggcaaat cgctccctct ccgcgcaggc
    10741 gtttcacttt cagttgcaca tgcgttgccg caccagtgat cagccacagt tttccgccat
    10801 tcagattgat gttaccaaca ataaaagtga caccgtcacc ttttaccgta ctgccgtcga
    10861 gaatcaacac accgccctgc tgtacagtaa tcgttgattg ttgcagatct gcgccatagc
    10921 caataatcat tgaagcgccg tccagtaatg caacactccc ggtcagttca accggtgcgc
    10981 gatcttcctc tacgacaaaa ttttcgtccg cgctggtggg tgacaacagg atcactgttc
    11041 caccttgtat taccgcattt tccagcgtac cggcatgcac ttcagcccga ccacccacat
    11101 tcacggacag gttttgcgtc ttaccggaac tgtagagctg aaggccatcc gtccccagac
    11161 gataaatgga tccattctca acaatggtgt cagagtcttc accaccgaga ttattcatgg
    11221 tgccaccagc aagcaacgta tcactggctt tcccggccag cataaaaacg ccgccctgat
    11281 taatctcaca attgctggct tccccacctg gatacaccaa caattcacca ccttcatcta
    11341 ccacgaccgc tgaggttgtc ccattaacca acaggccgcc ctcttgatcg agaatgattt
    11401 tttccgcgcg atgtccttcc agtacacgca ggttaccgcc attttccagc aacaaaccgc
    11461 aggcataacc ctgatcaacg ctgaattcac cttcgggatg gcggccatta accgtagcga
    11521 gcgtagagag actaattgcg cctccctcgg actgaacaat atctgtggca atggcaccgt
    11581 cgctgaccga tagcgtgcca ttgttaccgt actgtgtgca tttggcgatc ccaccggttg
    11641 ccactttcaa ccagccagcc cccgtgacta cggtattttc ggctcttccg ccagcttcaa
    11701 caatcaactc gccttcagta agttgcgtcg cgccaatgac ctcgccggtc ttaacaattt
    11761 gcacattccc gtcgctcatc aagtttttcg catcagatcc catgatttat tcctttgctg
    11821 catctgtgtg cctttattgc tacctaaatg taaaggctac ggaggattta tccacgacag
    11881 atttgagatg gtggcaaaca actctgttta aactctgata cacgaattat tgggttgtat
    11941 cagatgtaaa tgcgatcctg aataaaaatc gcccttgcaa atcaacaaaa tatagccaat
    12001 ttgcttaaaa gctctgcaaa cggtcgaaat agcgcagaaa attacgtttt gcctcttgcc
    12061 accttcccac tctgccgcta atattcgtcc ccgttgtcac ctacaacgtt gcgttcatag
    12121 ctcagttggt tagagcacca ccttgacatg gtgggggtcg ttggttcgag tccaattgaa
    12181 cgcaccatcc tgcgtccgta gctcagttgg ttagagcacc accttgacat ggtgggggtc
    12241 ggtggttcga gtccactcgg acgcaccaga ttttcttaat ctggtcttct cctttttccc
    12301 tctgtttctt ctctgtatcc aatacgttaa aagatttaca ctgtcttcgt atgcgttatc
    12361 agaaggagaa tcgctatggc aactttgtta caacttcatt ttgcttttaa tggcccattt
    12421 ggcgacgcaa tggctgagca gcttaaaccg cttgctgagt cgattaatca ggaacctggt
    12481 tttctgtgga aggtatggac agaaagtgaa aagaaccacg aagccggtgg gatctatctt
    12541 tttactgatg aaaaaagcgc ccttgcctat ctggaaaaac atactgcccg acttaaaaat
    12601 ctcggcgttg aggaagttgt cgccaaagtt ttcgatgtca atgagccact gagtcaaatc
    12661 aatcaggcaa aactcgcctg acagaattta atcaagggcg gttagcgccc ttttcatccc
    12721 tgtctgaaat ttctcaaatt ctaaaaatct caaccaaact tatctgataa cactaaattc
    12781 gaaagaatgc gtacaggtaa gtaacaatga aaaaaattgc tattgtgggt gccgggccta
    12841 cggggatcta caccttattc tcgcttctac agcaacaaac tccactttct atttctatct
    12901 tcgagcaggc tgacgaggcc ggtgtcggga tgccatacag tgatgaggaa aactcaaaaa
    12961 tgatgctggc aaatattgcc agtattgaaa taccgccgat taattgtacg tatctcgaat
    13021 ggctacaaaa gcaagaagcc agccatctcc agcgttatgg cgttaaaaaa gaaaccttgc
    13081 acgatcgtca gtttttaccg cgaattctgc tgggcgaata tttccgcgat caatttttac
    13141 gattagtaga ccaggcacga cagcaaaaat ttgcagtggc tgtttatgaa tcatgccagg
    13201 ttaccgatct gcaaattaca aatgctggcg tcatgctcgc tacaaatcag gatttaccca
    13261 gcgagacgtt tgatttagcg gtgattgcca cgggtcacgt ctggcctgat gaagaagaag
    13321 caaccagaac gtattttccc agtccgtggt caggcctgat ggaagcaaag gtcgatgcgt
    13381 gtaacgtggg tattatggga acatccttga gcggactgga tgcggcaatg gcagtggcta
    13441 ttcagc
//
LOCUS       DADMIB010000115        13369 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.115, whole genome shotgun sequence.
ACCESSION   DADMIB010000115 DADMIB010000000
VERSION     DADMIB010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13369
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.115"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(171..1094)
                     /locus_tag="JNZ89_003046"
     CDS             complement(171..1094)
                     /locus_tag="JNZ89_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310535.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8936840.1"
                     /translation="MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLE
                     QTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISS
                     FGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARK
                     LATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKV
                     TGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVS
                     RLATSAKVRITVEFLRQYFAEHYPNFSLEHA"
     gene            1197..2282
                     /gene="dmlA"
                     /locus_tag="JNZ89_003047"
     CDS             1197..2282
                     /gene="dmlA"
                     /locus_tag="JNZ89_003047"
                     /EC_number="1.1.1.83"
                     /EC_number="1.1.1.85"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional
                     D-malate/3-isopropylmalate/tartarate dehydrogenase"
                     /protein_id="HAY8936841.1"
                     /translation="MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFDLSFEQMG
                     WASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQ
                     YINLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQES
                     VFTRRGVDRILRYAFELAQSRPRKTLTYATKSNGLAISMPYWDERVEAMAENYPEIRW
                     DKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFP
                     SLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIA
                     HGPKTPDMKGNATTPQVADAICKIILR"
     gene            2532..4142
                     /gene="yeaV"
                     /locus_tag="JNZ89_003048"
     CDS             2532..4142
                     /gene="yeaV"
                     /locus_tag="JNZ89_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter YeaV"
                     /protein_id="HAY8936842.1"
                     /translation="MMSNVKKKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTF
                     VTRTLGSAVQVLVLLAMGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSST
                     LYWGVAEWAYYYQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFH
                     VRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSA
                     LTGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPT
                     EFITNSIINAIGLTTQNFLQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTR
                     VSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVPQVLETLGGETAVQ
                     QVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWC
                     VVITLIPLSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPAHQV
                     EHYLPQTPVEALEKTPVIPAGTVFKGDN"
     gene            4174..5298
                     /gene="yeaW"
                     /locus_tag="JNZ89_003049"
     CDS             4174..5298
                     /gene="yeaW"
                     /locus_tag="JNZ89_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaW"
                     /protein_id="HAY8936843.1"
                     /translation="MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFA
                     KSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGK
                     AKNVITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN
                     ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTSANWKNIVDNYLECYHCGPAHPG
                     FSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPI
                     KGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQK
                     GLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD"
     gene            5354..6319
                     /gene="yeaX"
                     /locus_tag="JNZ89_003050"
     CDS             5354..6319
                     /gene="yeaX"
                     /locus_tag="JNZ89_003050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaX"
                     /protein_id="HAY8936844.1"
                     /translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVI
                     VQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGNRLTISTP
                     NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV
                     QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIAAD
                     TLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG
                     TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL"
     gene            complement(6373..7488)
                     /gene="rnd"
                     /locus_tag="JNZ89_003051"
     CDS             complement(6373..7488)
                     /gene="rnd"
                     /locus_tag="JNZ89_003051"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310540.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HAY8936845.1"
                     /translation="MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFD
                     GEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQIL
                     SAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITA
                     KLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLAD
                     WRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLTLVE
                     KAQTLPEEALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLL
                     NWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ"
     gene            complement(7569..9254)
                     /gene="fadD"
                     /locus_tag="JNZ89_003052"
     CDS             complement(7569..9254)
                     /gene="fadD"
                     /locus_tag="JNZ89_003052"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HAY8936846.1"
                     /translation="MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVN
                     MGEVMTFRKLEERSRAFAAYLQQGVGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV
                     NVNPLYTPRELEHQLNDSGASAVVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAK
                     GTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT
                     GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELG
                     GQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGG
                     MPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLV
                     DDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRI
                     VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL
                     TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA"
     gene            complement(9459..10040)
                     /gene="yeaY"
                     /locus_tag="JNZ89_003053"
     CDS             complement(9459..10040)
                     /gene="yeaY"
                     /locus_tag="JNZ89_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein YeaY"
                     /protein_id="HAY8936847.1"
                     /translation="MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGRSPTPQQDLVRV
                     MSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN
                     GFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
                     DPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE"
     gene            complement(10080..10775)
                     /gene="tsaB"
                     /locus_tag="JNZ89_003054"
     CDS             complement(10080..10775)
                     /gene="tsaB"
                     /locus_tag="JNZ89_003054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HAY8936848.1"
                     /translation="MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQD
                     ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA
                     WRKNGATRVLAAIDARMGEVYWAEYQRDENGIWRGEETEAVLKPELVHERMQQLSGEW
                     VTVGTGWQAWPDLGKESGLVLRDGEVLLPATEDMLPIACQIFAEGKTVAVEHAEPVYL
                     RNNVAWKKLPGKE"
     gene            complement(10833..12743)
                     /locus_tag="JNZ89_003055"
     CDS             complement(10833..12743)
                     /locus_tag="JNZ89_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HAY8936849.1"
                     /translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVE
                     AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG
                     RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
                     VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE
                     ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
                     QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
                     AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSW
                     IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVPRNLPQTNQPGSAR
                     QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
                     SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
                     EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
                     RAVRFLAIPSSR"
     gene            12875..13219
                     /locus_tag="JNZ89_003056"
     CDS             12875..13219
                     /locus_tag="JNZ89_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HAY8936850.1"
                     /translation="MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
                     QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
                     KYKVEIKIVAAV"
BASE COUNT         3200 a         3554 c         3335 g         3280 t
ORIGIN      
        1 accagatagg tccagtaatt cagaaccccg tattcagcga acacattaac ctctttaatt
       61 atctttcgat catgcgcgat taaaggtgaa tatgctaacc aatctgtagc ggcttagaaa
      121 ggagaaaatc aggttttaac ccgatatcaa cccgataatt gaatcattaa tcaggcatgc
      181 tccagtgaaa aattcgggta gtgctcggca aaatactggc gtaaaaattc taccgttatc
      241 cgcactttcg ctgacgtcgc cagccttgaa acataaacgg cccagacgtt cgctggctgg
      301 taatattccg gtagcacttg cactaaatga ccactggcaa tgttttcgct aacatcccac
      361 caggaacgca gagcaatccc ctgcccatcg agacaccact gatggacaat ttctccatga
      421 ttagacgaca gtgggccggt gactttaatc gcatggtggc cttctttatt gcgtaattgc
      481 cagacaccaa aaggatgatc gcgctcttta atgaccaggc acggcaatgc agaaagatcg
      541 gttaaatgtt tcggcgcgcc atgttgcgca ataaattccg gcgacgcgca gagaatgcgg
      601 taattggtcg ccagtttgcg ggcgattaaa ttaggggcga tgtcatcgcc aatgcgaata
      661 tcgagatcga caccttcatt gaccaaatcg accagccggt cttccacatc aaaacgtaat
      721 tccagttgcg gatacgcctt cgccagcgct gataacgccg gagccaccac ctgtcgtcca
      781 aaaccaaagc tgctgataat acgcagcatc ccctgtggca cctgacgcac gtcagaaagt
      841 tcgtccatca tctgaccgac atcctgcaaa atccgctgcg cccattcata aatccgctct
      901 ccttcttcgg taatggtgac gcggcgggtg gtgcggtgta acaacaccac gtttagcgtt
      961 tgctccagca aggcgatgcg cttgctgacg aacgccggtg aaacgcccag ttcttccgcc
     1021 acggcggcaa aaccagcccg acgagccacc agcataaaga cgcgcaaatc attcagcagc
     1081 ggtaaattat tcatgattcg tgttttatgt ttcaccagtt acggggatta attccttttc
     1141 cgtcaattat aggatggtga tgttgtcaat tttgatggtc aggaagtgag aacccaatga
     1201 tgaaaacgat gcgtattgct gcgatcccgg gagacgggat tggtaaagaa gtccttcctg
     1261 aagggattcg cgtgttacag gctgccgctg agcgctgggg tttcgacttg agttttgagc
     1321 aaatggggtg ggcgagctgc gagtattaca gccatcacgg taaaatgatg ccggacgact
     1381 ggcatgagca acttagccgt ttcgacgcca tctattttgg tgccgtcggc tggccggata
     1441 ccgttccgga ccatatttcg ttgtggggtt cgctgctgaa atttcgtcgt gaattcgacc
     1501 agtacatcaa cctgcgcccg gttcgtctct ttcctggcgt tccctgcccg ctggcgggaa
     1561 aacagcctgg cgacatcgat ttttacgtgg tcagggaaaa caccgaaggc gaatattcct
     1621 cgctcggcgg tagagtgaat gaaggtacag agcatgaagt cgtcattcag gaatcggtat
     1681 ttacacgtcg tggtgtcgat cgcattttgc gttatgcctt cgaacttgcg caaagccgcc
     1741 cacgtaagac gctaacttat gccactaaat cgaacggttt agccatcagc atgccgtact
     1801 gggatgagcg agtggaagca atggccgaga attacccgga gatccgctgg gacaagcagc
     1861 atattgatat tctctgcgcg cgttttgtga tgcagccgga acgcttcgat gtggtggtgg
     1921 cgtccaattt gtttggcgat atcctttccg atcttggccc ggcctgcacc ggcaccattg
     1981 gcattgcccc atccgccaac ctgaatccgg aacgcacttt cccgtcgctc ttcgagcctg
     2041 tccacggttc cgcgccggat atctacggga aaaatattgc taaccctatc gccacgattt
     2101 gggccggggc aatgatgctc gattttctcg gcaatggcga tgagcgtttc cagcaagcgc
     2161 ataacggtat tctggcagca attgaagaag tgattgctca cgggccgaaa acacctgata
     2221 tgaaaggcaa tgccaccacg ccacaggttg ccgacgcgat ttgcaaaatt attttgcgtt
     2281 aaggtcaaac cagtttattt gaaccgcgtc actgacgcgg ttttttattc gttctttgca
     2341 gtaaataacc tgcgtcattt caccttttat tgtttccgtt tcgtgtttta tggctttccg
     2401 cattcttaat tgtttaattt atgtaatatt caaataatca atttgttaaa cacaacatac
     2461 aactcattac cctgcaaata attacaactg gcaaaagcca gagacgggct tttatgccca
     2521 ggagatgact catgatgagc aatgttaaga aaaaagatgt gccgctgata agcatcagcc
     2581 tggtggccat tcttttcatc gcagctgcat taagcctttt cccacaacaa tcggccgacg
     2641 cggccaacgc aatatacact tttgttacgc gtacgttagg ttccgccgta caggtattgg
     2701 ttttgctggc aatgggactg gtgatttatt tagccaccag taaatacggc aatattcgtc
     2761 ttggcgaagg aaaaccggaa tacagcacgc tctcctggct gtttatgttt atttgtgccg
     2821 gtttaggttc ttctacgctt tattgggggg ttgctgaatg ggcctattat tatcagacac
     2881 ctggattaaa tatcgcaccg cgttcacaac aggcactcga atttagcgtt ccctactctt
     2941 tcttccactg gggcatcagc gcctgggcaa cttatacgct ggcctcatta atcatggctt
     3001 atcactttca tgtgcggaaa aacaaaggtc tgagcctttc cggcattatt gctgctatta
     3061 ccggcgttcg cccgcaaggc ccatggggaa aactggttga tttgatgttc ctgatcgcca
     3121 ctgtcggcgc actgactatt tcccttgttg tcaccgcagc aacctttact cgtggacttt
     3181 ccgcactgac aggtttaccc gacaacttca ccgtgcaggc atttgtgatc ctgctttctg
     3241 gcggcatttt ttgcctaagc tcgtggattg gtatcaacaa cggtttgcaa cgtctgagca
     3301 aaatggttgg ctggggcgcg ttcctgctgc cattactggt gctgattgtc ggcccaaccg
     3361 aatttattac caacagcatc atcaatgcca tcggcctgac cacgcaaaac ttcctgcaaa
     3421 tgagcttatt caccgatccg cttggcgatg gttcatttac ccgcaactgg accgttttct
     3481 actggctgtg gtggatctca tacacccctg gcgtagcaat gtttgtcacc cgcgtttccc
     3541 gcggtcgtaa gattaaagaa gttatctggg gactgatcct cggcagcacc gtcggttgct
     3601 ggttcttctt cggcgtaatg gaaagctatg ccattcatca gtttatcaat ggcgtaatca
     3661 acgtcccaca ggtgctggaa acactgggcg gcgaaacagc tgtacagcaa gttctgatgt
     3721 cgttgccagc cggtaaattg ttcctcgccg catacctggg cgtgatgatt attttccttg
     3781 cctcgcatat ggatgcagtg gcctacacca tggcggcgac cagtacgcgt aatctccagg
     3841 aaggtgacga tcctgaccgt gggctgcgtc ttttctggtg cgtggtgatc actctgatcc
     3901 cgctttccat cttgtttacc ggtgcttcgc tggaaacgat gaaaaccacc gtcgtgctca
     3961 cagcccttcc cttcctcgtc attttactgg tgaaagtcgg cggatttatt cgctggctga
     4021 aacaggatta cgccgacatt ccggctcatc aagttgaaca ttatctcccg cagacaccgg
     4081 ttgaagccct ggaaaaaaca ccagtgatcc ctgcgggaac cgtattcaaa ggcgacaact
     4141 gagcgccatc atcctaacga taaaggtatc cctatgagca atctgagccc tgactttgta
     4201 ctacccgaaa atttttgcgc taacccgcaa gaggcgtgga ccattcctgc ccgtttttat
     4261 accgatcaga acgcgtttga acacgaaaaa gagaacgtct tcgccaaaag ctggatttgc
     4321 gtcgctcaca gcagcgaact ggcgaatgcc aatgattatg tgacgcgtga gatcattggc
     4381 gaaagcatcg tgctggtacg cggtcgtgat aaggttttgc gcgcgttcta taacgtgtgt
     4441 ccgcaccgtg gtcatcagtt gttgagcggt gaaggaaaag caaaaaatgt gattacctgc
     4501 ccgtatcacg catgggcatt caaactcgat ggcaatctgg cccatgcacg taactgcgaa
     4561 aacgtcgcca atttcgatag cgacaaagcg caactggttc cggtgcgtct ggaagaatat
     4621 gccggattcg tcttcatcaa catggacccc aacgccacca gcgtagaaga tcagttaccc
     4681 ggtctgggcg cgaaagtgct ggaagcctgc ccggaagtcc acgatctgaa actggcggcc
     4741 cgctttacca cccgcacgtc tgccaactgg aagaacattg tcgataacta tctcgagtgc
     4801 tatcactgtg gtccggcgca tccaggtttc tccgactccg tacaggttga tcgttactgg
     4861 cacaccatgc acggtaactg gacgctgcaa tacggtttcg ccaaaccgtc cgaacagtcg
     4921 tttaaatttg aagagggtac ggatgcggca ttccacggtt tctggctgtg gccgtgcacg
     4981 atgctgaacg tcaccccgat caaagggatg atgacggtca tttatgaatt cccggtggat
     5041 tctgaaacta ccctgcaaaa ctacgatatt tacttcacca atgaagagtt aaccgacgag
     5101 caaaaatcgc tgattgagtg gtatcgcgat gtgttccgtc cggaagattt acgtctggtt
     5161 gaaagcgtac agaaagggct gaaatcgcgt ggctatcgtg gtcaggggcg catcatggcc
     5221 gacagtagcg gtagtggcat ttccgaacat ggtatcgccc atttccataa tctgctggcg
     5281 caggtgttta aggactaatg acatcggcgg cggtattttc cgctgctggg ctgatttttg
     5341 atggagtaca gcaatatcag actatcaaat gtttgaagta caggtgagcc aggttgaacc
     5401 ccttaccgaa caggtgaaac gcttcacgct ggtggcaacc gatggcaaac cgctgcctgc
     5461 gttcaccgga ggaagtcacg tcattgtgca gatgagcgat ggtgataacc agtacagcaa
     5521 tgcgtattca ctactgagtt cgccgcatga cacctcttgt tatcagattg ccgttcggct
     5581 ggaggaaaac tcgcgcggcg gttcccgctt tttgcatcag caggtaaaag tgggcaatcg
     5641 gttaacgatt tcaacgccta ataacctgtt tgcgctaatt ccctcagcca gaaagcatct
     5701 gtttatcgcg ggcggtattg gtatcacccc tttcctgtcg cacatggcag agctgcaaca
     5761 cagcgacgtc gactggcagc tacattactg ctcgcgaaat ccagaaagtt gcgcatttcg
     5821 tgatgagcta gtccagcatc cgcaggctga gaaagttcac ttgcatcact catcaaccgg
     5881 aacacgactg gaattagcgc gattattggc ggatatcgaa cctggcacac acgtttatac
     5941 ctgtggtccc gaggcgctaa atgaagcggt aagaagtgaa gctgcgcgtc tggacatcgc
     6001 cgccgatacg ctgcactttg agcaatttgc tatcgaagac aaaaccggcg atgcctttac
     6061 cctggtgctt gcccgttccg gaaaagagtt tgtggtgccg gaagagatga ctattttgca
     6121 ggttattgaa aataataaag ccgcgaaagt ggaatgttta tgtcgtgaag gggtatgcgg
     6181 aacctgcgaa acagcaatac tggaaggtga agctgaccat cgggatcagt attttagcga
     6241 tgaagagcgt gccagccagc aaagtatgtt gatctgttgt tcgcgtgcga agggtaaacg
     6301 cctggtgttg gatttgtagt ttgccaaagc cggatgtggc gctgagcgcg cccagtccgg
     6361 cttcggaaga ttttactgcg gatattcctg caataaattg tgtaatgctt ccgccatcag
     6421 ctcaccacgc cagccggaaa tcagctccgg caaattgttc tgcggtttca gtttccagtg
     6481 ccagttcagc agttggttga tttgccgacg cgatgccagc aattcggcgc tgatcttatg
     6541 cgtttcgctc acgtcagtaa tcagcgactt aatcgcttta aacgctttac gataaccagg
     6601 catgtccatc aggttaagca tcggctgcgg taaggcctct tccggcaatg tctgcgcttt
     6661 ttccaccagc gtcagcagcg ttttaccgtg aaagcggatt tcgctaccgg ataaacccag
     6721 gctgtccagt tcgcctaaac ttcccggcat ataacgcgcg accgaccaca aatgctcttc
     6781 acgcacgaca aagttcaccg ccagatcacg ctctcgcgcc ttgcgcagtc gccagtcggc
     6841 taacagttgc agacaggcca gttggcgtgt gcgtaactgc caggcattgg tgatatcacg
     6901 ccaggcatct tccggcgcaa cgacttcctg acgacgcatt tgcatcaggc ggcattcatc
     6961 cagcgccgca ggtagccagc cggaggcctc cgtttctacc ataagcttgg cggtgatcgg
     7021 taacagatac cagacatccg ccgctgcgta ttcacactga cgttcggtca gcggtctggc
     7081 cagccagtcg gtgcgcgatt cactcttgtc cagcgtaacg ccggaatact cttccaccat
     7141 ggaagcgaaa ccccatgaca tcgggcgtcc gcagaaggca gaaaggattt gcgtgtcaat
     7201 caagggttgt ggtaattcgc caaagacatt gaggaacact tccagatctt cactgcctgc
     7261 atggagaaat tttgtgatgg acggatcgcg caggatcgct ttcagcggtg accagtcggt
     7321 gatcccgaga ggatcaatta gcgccagatg ctcgccatcg aaaagttgaa tcaaccccag
     7381 ctgcgggtaa taagtgcgcg tacgaacaaa ttcagtatcc agggctatcg ccggaaaggc
     7441 acggacggct tcacacaaag aagccagcgc atcgtccgtg gtaatcattt ggtaattcaa
     7501 attgttttct ctttagtggg cgtcaaaaaa acgccggatt aaccggcgtc tgacgactga
     7561 cttaacgctc aggctttatt gtccactttg ccgcgcgctt cgtcacgtaa ttctcgtcgc
     7621 aaaatttttc cgacgttaga tttcggtaac tcatcacgaa actccaccag cttcggtact
     7681 ttgtatcccg tgagctgacg gcggcaaaaa gtcaccagtg actcttcggt aagcgatgga
     7741 tcttttttca ctacgaagat tttcaccgct tcaccactgg agccggaagg tacgccaaca
     7801 gccgcgactt cctgtacgcc aggatgctgc atgacgacat cttcaatctc gttgggatag
     7861 acgttaaaac cggaaaccag aatcatgtct tttttacgat cgacaatgcg caggaatcct
     7921 tcttcatcca ttaccgcgat gtcgccggtg tgtaaccagc catttttgat gatttcatcg
     7981 gtagcatcgg gacgctgcca gtaacccagc atcacctgcg gtcctttgac acaaagctca
     8041 cccggttgac ctggtggtac ttcattatca tcatcatcca ccagtttggc ttccgtcgac
     8101 ggcaccggca aaccgatgct accactatga taatcaatat catatgggtt aacgctgacc
     8161 agcggcgcac actcggtaag gccatagcct tccagcagat actgtccggt cagtttcacc
     8221 caacgctctg ccaccacttg ctgcactggc atcccaccgc ctgcggaaag atgcagactg
     8281 gagaaatcca gctgctggaa ctctttattg ttcagcaacg cattgaacaa ggtgttaacg
     8341 ccagtgatag cggtaaacgg atatttcgct aactctttta ccaaccctgg aatatcacgc
     8401 gggttagtga taagcaggtt ctgcccaccc agttcgataa acagcaggca gttaatggtc
     8461 agggcaaaaa tgtgatacag cggcagtgcc gttactacca gttctttacc tggatgcagc
     8521 aacggcccat aggtggcgtt gacctgttcc aggttcgcca gcatattgcg gtgagtcagc
     8581 atcgcgcctt tcgccacacc tgtggtgccg ccggtgtatt gcaggaaggc taaatcttcc
     8641 ggcaccagtt cgggtttgac gtactgcatc cggtagccgt tatgcagtgc gctacgaaat
     8701 gaaatggcat ctggcagatg gtatttcggc accaaacgct tgatgtattt aacaacgaaa
     8761 ttgactaccg tgccttttgc cgtagatagc tgatcgccca tacgggtcag aattacgtgc
     8821 tgaacggcgg ttttatcaac cactttttcc agtgtgtgag caaagttaga cacgataaca
     8881 accgccgatg cgccgctatc gttaagctga tgctcaagct cacgcggggt atacaacggg
     8941 ttaacgttta cgacgatcat cccggcacgc aaaatgccaa acagcgccac cggatattgc
     9001 aataaattag gcatcatcaa cgcaacgcga tcgcctttct tcagccccac cccttgttgc
     9061 aaataagcgg caaacgcgcg actgcgttct tccagcttgc ggaaggtcat cacctccccc
     9121 atattcacaa acgcaggctg atcggcgtag cgcgcgaccg actgctcaaa catatctacc
     9181 agagattgat aacggtcagg gttgatctcc gtcggaacgt ccgcgggata acggttaagc
     9241 caaaccttct tcaattcttc acctctaaaa tgcgtgttcg tcgtcatcgc aaccccaaat
     9301 gatatacatg ccgttaacat aatattaact catcatacca gcttgataat tacccaacga
     9361 aaaggttgcg aagcgcgtca ctatttattt ttatctttac cgtaagaatg cagaaacagc
     9421 ggaccagccg ctgtttcttt ttctttaaaa acaagcaatt attcagttac aactgtttgt
     9481 actctcgcgg gaccgggatt ataccagccc catccgccgt agccataggg ccagccacga
     9541 ccgccataaa accatggatc aatcggctga ggcggcataa tcacctgctg ggttaaatgc
     9601 caacgtttgt aacccgttac ttgcatcacc ataaatttat agggcgtatt gccgattttg
     9661 ccgtcaaccg caccagtgat tggcccgact accgtaacca gttgtccacg gaaatccacc
     9721 gggtccagaa aaccgttcac atcggcataa atgcgaccgc gagaaggttc tcccagcgtc
     9781 ggtctggctc cgctgtccag cggtacggta gcaatttcca ggcgggtttt cccttgctgg
     9841 ttttgtaccg caaccacttt gccaccaaag cgtgcctcct gaccaacgta cagctgcggc
     9901 gcactcatca cccgaactaa atcttgttgc ggcgtgggac tgcggccttt aatggcgtcc
     9961 ggcacagtga cacaaccgct cagcattagc gcaaacgtac ctgccagtat gcctttgata
    10021 acattctttt gaaccgccat gatgcgactc ctttttttct cagagcatac tcttaagatt
    10081 cattctttgc ccggaagttt cttccatgcg acgttgttac gtaaataaac cggttcggca
    10141 tgttccaccg ccaccgtttt accctcggca aatatctgac acgcaatcgg cagcatatct
    10201 tccgtcgctg gcagtaaaac ttctccgtcg cgcaaaacca gcccgctctc tttaccgaga
    10261 tccggccagg cttgccagcc cgtccctacc gttacccatt cgccggaaag ctgttgcatt
    10321 cgttcatgaa cgagttcggg tttgagtacg gcttcggttt cttcaccgcg ccagataccg
    10381 ttttcatcac gctgatattc ggcccagtaa acttcgccca tccgcgcatc aatggcagcc
    10441 agcacgcggg ttgcgccgtt tttgcgccac gccccttgcg ccattgtcat tagcgtggag
    10501 acgccaatca tcggcagctc tgcgccaagt gccagccctt gcgcaatgcc aataccaatg
    10561 cgcacgccgg taaagctacc ggggccgcgc ccgtaagcca gagcgttaat atcagtcagg
    10621 gaagttccgc tggtggtcag gatatcctgc accatcggta agattcgttg agtatgttca
    10681 cgagggcaaa gctcaaaatg agcgttgaca gtaccgtcgt tccacagggc gacagagcag
    10741 gcctctgtcg cggtatcgat agccagaatt cgcatgggtc ttcgtgctta gatcaataaa
    10801 aaggcgcgca tcataccata ctccgtaaca aattacctgg aggatggtat cgcaaggaaa
    10861 cgaaccgcac gggcaatgtc acgggtgcgc ggcgcgggcg gcagactggc gagaaacgtc
    10921 gcgccgtaag ggcgcatcac cagccgattg tcacaaatca ccaaaacccc gcgatcgtcg
    10981 gcgtcgcgaa tcagtcgccc taccccctgc ttgagagtaa tcaccgcatc cggcagttgt
    11041 acttcatcga acgggtcgcc accgcgcaaa cggcaatctt ccatgcgcgc ttttaacagc
    11101 gggtcatccg gtgaggtaaa cggcaacttg tcgataatca ccaatgacaa tgtatcgcca
    11161 cgcacgtcca ccccttccca gaaactactg gttgccacaa gaagcgcgtt accggcgctg
    11221 acaaattgct gcaacagttg ccctttgctg gtttccccct gcaacaaaac gggaagcgtc
    11281 atggtagcgc ggaactgctc ggccagatca cgcatcatgg cgtgcgaggt acaaagcata
    11341 aaacaacgac cgttgttagc ttcgatgatc ggtcgcagca ttgccgctaa ctggcgagca
    11401 gaacctggct ggttggtttg cggcagattg cgcggcacac agagtaacgc ctggcggctg
    11461 taatcaaacg ggcttggcaa tagcaacgac tccgcctgtt ctatcccaag ccgcgaggtg
    11521 aaatgatgca gatcgtcgtt caccgacagc gttgctgagg tgaagatcca gctaccaggc
    11581 ttttgcgcca ttaactcttt gaatttatcc gccacgctga gcggcgtgag agccagagta
    11641 aaatggcgcg aagtgcattc gtaccagtag ctgtagcccg gctgattgat ctcttttagc
    11701 cgcttcagcc gtgtgcgata caacgtagcg cgctcaaatg ccgcatccag caaggcggaa
    11761 cgccccagtg acagtttcgc cacgtcataa caaagttcca gggtgtcatc gagcagtaaa
    11821 aatgcccgct gaatttgcgg attagctaac agctcacgca ggttaccgcg ataacctggc
    11881 tcaccgagtt gcagacgaaa atcctgcgca ctctgggcaa gacgatcagc gcacttttgt
    11941 aactgctggg tgtcttttaa ttcggtgcgg taggcgatgg tgatgtcttt tgccaggtcg
    12001 agcagttgtc gactggagag tgactgacca aaatactggc tggcaatgtc cggtagctgg
    12061 tgggcttcgt cgaagatcat gacgtccgct tccgggatca gttcgccaaa tccactctct
    12121 ttaaccacca tatccgccag aaagagatga tggtttacca ccaccacatc ggcgtccatc
    12181 gcttttttac gtgctttgac cacaaagcaa tctttataca tcgggcagtc gctgccaaga
    12241 cagttgtcgt tggtgctggt aaccagcggc cacgcctgtg aatcttccgc cacgctgacg
    12301 caggtgctga tatcaccatc gactgtttga ttagaccagg agcgcagcag gatcacatcg
    12361 cttaagattt gtaccggcag atcgcccccc gccagcgcct gctgttcgag acgttcgagg
    12421 cagaggtagt ttgagcgccc tttcagcagc gccacgttgc ccgtatattt caatgccttt
    12481 gagactgttg gcaaatcgcg gctgtagagc tgatcctgca acgcttttga gccggtcgag
    12541 ataatgactt tctttttcgc ccgcagcgca ggagccaggt aagcgtaggt tttgcccgta
    12601 ccggttcctg cttccaccac cagcggctgg cctttttcta tcgcctgggt gacggctacc
    12661 gccatctgtc gctgtggttc tcgcggctta aagcctggta tcgctttcgc cagctgaccg
    12721 tctggtgcaa aatcgtccgt cacactaccc cctgttgatt tgaacgggga ttatgtcagg
    12781 atgagggcgc tttcgccagt tgaagtggtg acggcaacct cacattgtgg cagtctttgc
    12841 agcacgaaaa tggaagtata atgaggacaa aatgatgact atcgttcgta tcgatgctga
    12901 agcccgctgg tctgatgtag taatccacaa caacacgctc tactacactg gtgtaccgga
    12961 aaacctcgac gccgatgctt ttgagcaaac cgccaacacg ctggcgcaga ttgacgccgt
    13021 gctggaaaaa cagggcagca ataaatcgag cattctggat gccaccattt tcctggctga
    13081 taaaaacgac ttcgcggcga tgaataaagc gtgggatgcc tgggttgtgg cgggtcatgc
    13141 gccggtgcgc tgcacggtgc aagcggggct gatgaacccg aagtataaag ttgaaattaa
    13201 gattgtggct gcggtgtaag ctttatcgaa gcaaaataag tcagacgata atttatcgat
    13261 aatactggtc ggttttacat aaatcgacca gagattaaga tattactgtt gatgctcctg
    13321 ctaattcatt atttattttt ataatttcaa ttttagctat aaagctaac
//
LOCUS       DADMIB010000116        13354 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.116, whole genome shotgun sequence.
ACCESSION   DADMIB010000116 DADMIB010000000
VERSION     DADMIB010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13354
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.116"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            414..1616
                     /locus_tag="JNZ89_003057"
     CDS             414..1616
                     /locus_tag="JNZ89_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline/glycine betaine ABC transporter
                     ATP-binding protein ProV"
                     /protein_id="HAY8936851.1"
                     /translation="MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV
                     KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
                     VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS
                     YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
                     VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
                     KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
                     QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
                     DREGVNNG"
     gene            1609..2673
                     /gene="proW"
                     /locus_tag="JNZ89_003058"
     CDS             1609..2673
                     /gene="proW"
                     /locus_tag="JNZ89_003058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     permease ProW"
                     /protein_id="HAY8936852.1"
                     /translation="MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTP
                     APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQVLL
                     GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
                     VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
                     LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLAL
                     SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
                     GNRRWYTTGPVGLLTRPFIK"
     gene            2731..3723
                     /gene="proX"
                     /locus_tag="JNZ89_003059"
     CDS             2731..3723
                     /gene="proX"
                     /locus_tag="JNZ89_003059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708493.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     substrate-binding protein ProX"
                     /protein_id="HAY8936853.1"
                     /translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
                     TLLVSRALEKLGYTVNKPSEVDYNVGYTLLASGDATFTAVNWTPLHDNMYEAAGGDKK
                     FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKEPKIAKLFDTNGDGKADLTGCNPG
                     WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
                     KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWTEKNPAAAKLF
                     AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAALK"
     gene            4015..5199
                     /locus_tag="JNZ89_003060"
     CDS             4015..5199
                     /locus_tag="JNZ89_003060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8936854.1"
                     /translation="MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLS
                     ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMM
                     ILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANL
                     GGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRPRAL
                     LGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKS
                     HHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDAR
                     NRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEA
                     AN"
     gene            5323..6060
                     /locus_tag="JNZ89_003061"
     CDS             5323..6060
                     /locus_tag="JNZ89_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HAY8936855.1"
                     /translation="MESPTPQPALGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
                     FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRII
                     QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
                     FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
                     VAILAGIVCGCLTALIQAFWQGAPDEL"
     gene            6050..6385
                     /gene="ygaH"
                     /locus_tag="JNZ89_003062"
     CDS             6050..6385
                     /gene="ygaH"
                     /locus_tag="JNZ89_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine transporter subunit YgaH"
                     /protein_id="HAY8936856.1"
                     /translation="MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLD
                     TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG
                     LAWKVMAII"
     gene            6476..7006
                     /gene="emrR"
                     /locus_tag="JNZ89_003063"
     CDS             6476..7006
                     /gene="emrR"
                     /locus_tag="JNZ89_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter EmrAB
                     transcriptional repressor EmrR"
                     /protein_id="HAY8936857.1"
                     /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR
                     NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
                     RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS
                     RLDQMEQDGVVLEAMS"
     gene            7133..8305
                     /gene="emrA"
                     /locus_tag="JNZ89_003064"
     CDS             7133..8305
                     /gene="emrA"
                     /locus_tag="JNZ89_003064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrA"
                     /protein_id="HAY8936858.1"
                     /translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL
                     VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFE
                     KAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL
                     QHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI
                     VSPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT
                     DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYP
                     LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTVREISLAPVNKLIDDIVKANAG"
     gene            8322..9860
                     /gene="emrB"
                     /locus_tag="JNZ89_003065"
     CDS             8322..9860
                     /gene="emrB"
                     /locus_tag="JNZ89_003065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HAY8936859.1"
                     /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
                     GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWECGVSSSL
                     NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
                     ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
                     MLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC
                     ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
                     RLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
                     ERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL
                     EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
                     GGAH"
     gene            complement(9924..10439)
                     /gene="luxS"
                     /locus_tag="JNZ89_003066"
     CDS             complement(9924..10439)
                     /gene="luxS"
                     /locus_tag="JNZ89_003066"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008458247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HAY8936860.1"
                     /translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
                     KEVMPERGSHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
                     AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
                     LPKEKLQELHI"
     gene            complement(10589..12145)
                     /gene="gshA"
                     /locus_tag="JNZ89_003067"
     CDS             complement(10589..12145)
                     /gene="gshA"
                     /locus_tag="JNZ89_003067"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HAY8936861.1"
                     /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTQATTGH
                     PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPL
                     SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
                     QAKCGDISGTDAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPF
                     EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK
                     IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
                     NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG
                     IGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGKAYQKVCDELVACFDNPDLTFSAR
                     ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMETADTE
                     PFAVWLEKHA"
     gene            complement(12218..12646)
                     /locus_tag="JNZ89_003068"
     CDS             complement(12218..12646)
                     /locus_tag="JNZ89_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8936862.1"
                     /translation="MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISYPWVLV
                     LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
                     LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
     gene            complement(12643..13209)
                     /gene="yqaB"
                     /locus_tag="JNZ89_003069"
     CDS             complement(12643..13209)
                     /gene="yqaB"
                     /locus_tag="JNZ89_003069"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1-phosphate/6-phosphogluconate
                     phosphatase"
                     /protein_id="HAY8936863.1"
                     /translation="MYERYAGLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDVQAMI
                     ALNGSPTWRIAQAIIELNQADLAPHALAREKTEAVRSMLLDSVEPLPLVEVVKSWHGR
                     RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPT
                     QCVVFEDADFGIQAARAAGMDAVDVRLL"
BASE COUNT         3114 a         3489 c         3403 g         3348 t
ORIGIN      
        1 gctcctctta tgtgatgggg aaagcggttg aaacagaaga tgaagactgg aatttctgag
       61 ggtgttattt tcaaaaatat cactacccgc agcagggaaa taattcccgc caaatagctt
      121 tttatcacgc aaatattctg tagtgatcta cactgagact ctgttgcatt attcgcctga
      181 aactacaata ttcaggcgtt ttttcgctat ctatgacaaa aaatatcaac ttttctcgat
      241 ttgctctcag cccttatatc acgggaaatt ccggcgattt gctcgcatca atattcatgc
      301 cacatttgcc ctcaggggtt gcctcagatt ctcagtatgt tagggtagaa aaaagtgact
      361 atttccattg ggtaatatat cgacataaac aaataaagga atctttctat tgcatggcaa
      421 ttaaattaga aattaaaaat ctttataaaa tatttggcga gcatccacag cgagcgttca
      481 aatatatcga acaaggactt tcgaaagaac aaattctgga aaaaactggg ctatcgcttg
      541 gcgtaaaaga cgccagtctg gccattgaag aaggcgagat atttgtcatc atgggattat
      601 ccggctcggg taaatccaca atggtacgcc ttctcaatcg cctgattgaa cccacccgcg
      661 ggcaagtgct gattgatggt gtggatattg ccaaaatatc cgatgccgaa ctccgtgagg
      721 tgcgcagaaa aaagattgcg atggtcttcc agtcctttgc cttaatgccg catatgaccg
      781 tgctggacaa tactgcgttc ggtatggaat tggccggaat taatgccgaa gaacgccggg
      841 aaaaagccct tgatgcactg cgtcaggtcg ggctggaaaa ttatgcccac agctacccgg
      901 atgaactctc tggcgggatg cgtcaacgtg tgggattagc ccgcgcgtta gcgattaatc
      961 cggatatatt attaatggac gaagccttct cggcgctcga tccattaatt cgcaccgaga
     1021 tgcaggatga gctggtaaaa ttacaggcga aacatcagcg caccattgtc tttatttccc
     1081 acgatctcga tgaagctatg cgtattggcg accgaattgc cattatgcaa aatggtgaag
     1141 tggtacaggt cggcacaccg gatgaaattc tcaataatcc ggcgaatgat tatgtccgta
     1201 ccttcttccg tggcgttgat attagtcagg tattcagtgc gaaagatatt gcccgccgga
     1261 caccgaatgg cttaattcgt aaaacccctg gcttcggccc acgttcggca ctgaaattat
     1321 tgcaggatga agatcgcgaa tatggctacg ttatcgaacg cggtaataag tttgtcggcg
     1381 cagtttccat cgattcgctt aaaaccgcgt taacgcagca gcaaggtctt gatgcggcgc
     1441 tgattgatgc gccgttagca gtcgatgcac aaacgcctct tagcgagttg ctctctcatg
     1501 tcggacaggc accctgtgcg gtacccgtgg tcgacgagga ccaacagtat gtcggcatca
     1561 tttcgaaagg aatgctgctg cgcgctttag atcgtgaggg ggtaaataat ggctgatcaa
     1621 aataatccgt gggataccac gccagcggcg gacagtgccg tgcaatccgc agacgcctgg
     1681 ggtacaccgg cgactgcacc gactgacggc ggtggtgctg actggctgac cagtacgcct
     1741 gcgccaaacg tcgagcattt taatattctc gatccgttcc ataaaacgct gatcccgctc
     1801 gacagttggg tcactgaagg gatcgactgg gttgttaccc atttccgtcc cgtcttccag
     1861 ggcgtgcgcg ttccggttga ttatatcctc aacggtttcc agcaagtgct gctgggtatg
     1921 cccgcaccgg tggcgattat cgttttcgct ctcatcgcct ggcagatttc cggggtcgga
     1981 atgggcgtgg cgacgctggt ttcgctgatt gccatcggcg caatcggtgc ctggtcgcag
     2041 gccatggtta ccctggcgct ggtgttaacc gccctgctgt tctgtatcgt cattggtttg
     2101 ccgctgggga tctggctggc gagaagtccg cgagcggcga aaattattcg tccactgctt
     2161 gatgccatgc agaccacgcc agcgtttgtt tatctggtgc caatcgtcat gctatttggt
     2221 atcggtaacg tgccgggcgt ggtggtgacg atcatctttg ctctgccgcc gattatccgt
     2281 ctgaccattc tggggattaa ccaggttccg gcggatctga ttgaagcctc gcgctcattc
     2341 ggtgccagcc cgcgccagat gctgttcaaa gttcagttac cgctggcgat gccgagcatt
     2401 atggcgggcg ttaaccagac gctgatgctg gccctttcta tggtggtcat tgcctcgatg
     2461 attgccgtcg gcgggctggg tcagatggta cttcgcggta tcggtcgtct ggatatgggg
     2521 cttgccaccg ttggcggcgt cgggattgtg atcctcgcca ttatcctcga tcgcctgacg
     2581 caggccgttg ggcgcgactc acgcagtcgc ggcaaccgtc gctggtacac cactggccct
     2641 gttggtctgc tgacccgccc attcattaag taactctgca cttgcccggt gacgccgggc
     2701 attatcaccc tgccaaaaaa aggaataaca atgcgacata gcgtactttt tgcgacagcg
     2761 tttgccacgc ttatctctac acaaactttt gctgccgatc tgccgggcaa aggtattact
     2821 gttaatccag ttcaaagcac catcaccgaa gaaaccttcc agacgctgct ggtcagccgt
     2881 gcgctggaga aattaggcta taccgtcaac aaacccagcg aagtagatta caacgttggc
     2941 tacaccttgc ttgcttccgg cgatgcaacc ttcaccgccg tgaactggac gccactgcat
     3001 gacaacatgt acgaagctgc cggtggcgat aagaaatttt atcgtgaagg ggtatttgtt
     3061 aacggcgcgg cacagggtta cctgatcgat aagaaaaccg ccgaccagta caaaatcacc
     3121 aacatcgcac aactgaaaga gccgaagatc gccaaactgt tcgataccaa cggcgacggt
     3181 aaagcggatt taaccggttg taatcctggc tggggctgcg aaggtgcgat caaccaccag
     3241 cttgccgcgt atgaactgac caacaccgtg acgcataatc aggggaacta cgcagcgatg
     3301 atggccgaca ccatcagtcg ctacaaagag ggcaaaccgg tgttttatta cacctggacg
     3361 ccgtactggg tgagtaatga gctgaagcca gggaaagatg tggtctggtt gcaggtgccg
     3421 ttctccgcac tgccgggcga taaaaatgcc gataccaaac tgccgaatgg cgcgaattac
     3481 ggcttcccgg tcagcaccat gcatatcgtt gccaacaaag cctggaccga gaaaaatccg
     3541 gcggcagcca aactgtttgc cattatgcag ttgccagtgg ccgatattaa cgcccagaac
     3601 gccattatgc atgacggcaa agcctcagaa ggcgatattc agggccacgt tgatggctgg
     3661 atcaaagccc accagcagca gttcgatggc tgggtgaatg aggcgctggc agcgctgaag
     3721 taatttttat tcaggcggat aaggcgtttt tgccttatcc gccgctctgt acacaatgcc
     3781 tgatgcgacg ctgacgcgtc ttatcatgcc tacaaaatac actcattccg tatggcggat
     3841 aaggcgtttt cgccgcatcc gccgttctgt gcacaatgcc tgatgcgacg ctggcgcgtc
     3901 ttatcatgcc tacaaaccac atcgcacatt tcaacaagct atctttcatc ccatattcat
     3961 caacatccgc tattattgat ttccagctta atcatcacct gatgaacaaa aataatgact
     4021 aaacctaatc atgagcttag cccggcgctg atcgtgctga tgtctatcgc caccggtctg
     4081 gcggtagcca gtaactatta cgcccagcca ttgctcgaca ccatcgcgcg taacttttcc
     4141 ctttccgcca gttcggcagg ctttattgtt accgccgcgc aattgggcta tgcagcaggt
     4201 ctgctgtttc ttgttcccct cggtgatatg tttgaacgcc gccgcctgat tgtctcgatg
     4261 accttactgg cggcaggcgg catgttaatc actgccagca gtcagtcgct ggcgatgatg
     4321 atcctcggta cggcattaac cggtttattc tctgtcgtgg cacaaattct ggttccgctg
     4381 gcagcgacgc tggcttcacc ggacaaacgc ggcaaagtgg ttggcactat tatgagcggt
     4441 ctgctgttgg ggatcttact cgcacggacc gttgccggat tgctggcgaa tctcggcggc
     4501 tggcgcaccg tcttttgggt tgcctcggtg ttaatggcac tgatggcgct ggcattatgg
     4561 cgtggtctgc cacaaatgaa atcagaaacc cacctcaact acccacagtt gttaggttcc
     4621 gttttcagca tgtttatcag cgataagatc ctgcgccccc gcgcattgct gggctgcctg
     4681 acctttgcca acttcagcat tctctggacc tcaatggcct ttttgcttgc cgctccacct
     4741 tttaactaca gcgatggtgt cattggtctg tttggacttg cgggagctgc cggagcgttg
     4801 ggcgctcgtc cggcgggcgg ttttgccgat aagggtaaat cgcaccacac cacaactttc
     4861 ggtctgctgc tgctattact ttcatggctg gcgatctggt ttggtcacac ttccgtactg
     4921 gcgctgatta tcggcatcct ggtgctggat ctcaccgtac agggcgtgca tatcactaac
     4981 cagacggtaa tttatcgaat acaccctgat gcgcgtaatc gcctgaccgc aggttacatg
     5041 accagctact ttattggcgg tgccgccggt tcgctaattt cagcctcagc ctggcaacat
     5101 ggcggttggg ctggcgtttg tctggctggc gcgacgattg ccctggttaa cttactggtc
     5161 tggtggcgag gttttcatcg tcaggaagcc gcaaattaag caatcagcaa ccgttttcgt
     5221 ggctttacac ttataagggt gttaagaagc ccatcagtct gataaggtta agatattcat
     5281 tcagtctatt tataatatta acaatcgtta agcgtacact ctatggaaag ccctactcca
     5341 cagcctgctc ttggttcggc gaccttcatg gaaggatgca aagacagttt accgattgtt
     5401 attagttata ttccggtggc ctttgcgttc ggtctgaatg cgacccgtct gggattctct
     5461 cctctcgaaa gcgttttttt ctcctgcatc atttatgcag gcgcgagcca gttcgtcatt
     5521 accgcgatgc tggcagccgg gagtagtttg tgggttgctg cactgaccgt catggcaatg
     5581 gatgttcgcc atgtgttgta tggcccgtca ctgcgtagcc gtattattca gcgtctgcaa
     5641 aaatcgaaaa ccgccctgtg ggcatttggc ctgacggatg aggtttttgc cgccgcaacc
     5701 gcaaaactgg tacgcaataa tcgccgctgg agcgagaact ggatgatcgg cattgccttc
     5761 agttcatggt catcgtgggt atttggtacg gtaatagggg cattctccgg cagcggcttg
     5821 ctgcaaggtt atcccgccgt tgaagctgca ttaggtttta tgcttccggc actctttatg
     5881 agtttcctgc tcgcctcttt ccagcgcaaa caatctcttt gcgttaccgc agcgttagtt
     5941 ggtgcccttg caggcgtaac gctattttct attcccgtcg ccattctggc aggcattgtc
     6001 tgtggctgcc tcactgcgtt aatccaggca ttctggcaag gagcgcccga tgagctatga
     6061 ggttctgctg cttgggttac tggttggcgt ggcgaattat tgcttccgct atttgccgct
     6121 gcgcctgcgt gtgggtaatg cccgcccaac caaacgtggc gcggtaggta ttttgctcga
     6181 caccattggc atcgcctcga tatgcgctct gctggttgtc tctaccgcac cagaagtgat
     6241 gcacgataca cgccgtttcg tgcccacgct ggtcggcttc gcggtactgg gtgccagttt
     6301 ctataaaaca cgcagcatta tcatcccaac actgcttagt gcgctggcct atgggctcgc
     6361 ctggaaagtg atggcgatta tataacccac aagaatcatt tttctaaaac aatacattta
     6421 ctttatttgt tactgtcgtt actatattgg ctgaaattaa tgaggtcata cccaaatgga
     6481 tagttcgttt acgcccattg aacaaatgct aaaatttcgc gccagccgcc acgaagattt
     6541 tccttatcag gagatccttc tgactcgtct ttgcatgcac atgcaaagca agctgctgga
     6601 gaaccgcaat aaaatgctga aggctcaggg gattaacgag acgttgttta tggcgttgat
     6661 tacgctggag tctcaggaaa accacagtat tcagccttct gaattaagtt gtgctcttgg
     6721 atcatcccgt accaacgcga cgcgtattgc cgatgaactg gaaaaacgcg gttggatcga
     6781 acgtcgtgaa agcgataacg atcgccgctg cctgcatctg caattaacgg aaaaaggtca
     6841 cgagtttttg cgcgaggttt taccaccgca gcataactgc ctgcatcaac tctggtccgc
     6901 gctcagcaca acagaaaaag atcagctcga gcaaatcacc cgcaaattgc tctcccgtct
     6961 cgaccagatg gaacaagacg gtgtggttct cgaagcgatg agctaacgcg tcatctcgct
     7021 caaaaatcca gatttataaa agaaaaaatg accggccagc atcgcaacat gctggccttt
     7081 ttggcaagca ggtcggctca gccgatgagt taagaagatc gtggagaaca atatgagcgc
     7141 aaatgcggag actcaaaccc cgcagcaacc ggtaaagaag agcggcaaac gtaagcgtct
     7201 gctcctcctt ctcaccttgc tctttataat tattgccgta gcgataggga tttattggtt
     7261 tttggtactg cgtcatttcg aagaaaccga tgacgcatac gtggcaggga atcagattca
     7321 aattatgtct caggtgtctg gcagcgtgac gaaagtctgg gccgataaca ccgattttgt
     7381 aaaagaaggc gatgttctgg tcactctcga cccgacagat gctcgccagg cgtttgaaaa
     7441 agccaaaact gcactggctt ccagcgttcg ccaaacccac cagctgatga ttaacagcaa
     7501 acagttacag gcgaatattg aggtgcaaaa aatcgccctc gcgaaagcac aaagcgacta
     7561 caaccgccgt gtgccgctgg gcaatgccaa cctgattggt cgcgaagagc tgcaacacgc
     7621 ccgcgacgcc gtcaccagtg cccaggcgca actggacgtc gctattcaac aatacaatgc
     7681 caatcaggcg atgattctgg ggactaaact ggaagatcag cctgccgtgc aacaggctgc
     7741 caccgaagta cgtaacgcct ggctggcgct ggagcgtacc cgtattgtca gtccgatgac
     7801 cggttatgtc tcccgccgcg cggtacagcc tggggcgcaa attagcccaa cgacgccgct
     7861 gatggcggtc gttccagcca ccaatatgtg ggtggatgcc aactttaaag agacgcagat
     7921 tgccaatatg cgtatcggtc agccggtcac tatcaccacg gatatttacg gcgatgatgt
     7981 gaaatacacc ggtaaagtgg ttggtctgga tatgggcaca ggtagcgcat tctcactgct
     8041 tccggcgcaa aatgcgaccg gtaactggat caaagtcgtt cagcgtctac ctgtgcgtat
     8101 cgaactggac cagaaacagc tggagcaata cccgctgcgc attggtttgt ccacgctggt
     8161 gagcgtcaat accactaacc gtgacggtca ggtactggca aataaagtac gttcaacacc
     8221 ggtcgcggta agtaccgtgc gtgaaatcag cctggcacct gtcaataaac tgatcgacga
     8281 tatcgtaaaa gctaacgctg gctaatccag aggtgcgtgt gatgcaacag caaaaaccgc
     8341 tggaaggcgc gcaactggtc attatgacga ttgcgctgtc actggcgaca ttcatgcagg
     8401 tgctggactc caccattgct aacgtggcga tccccactat cgccgggaat ctgggctcat
     8461 cgctcagcca gggaacgtgg gtaatcactt ctttcggggt ggcgaatgcc atctcgatcc
     8521 cgcttaccgg ctggctggca aagcgcgtcg gggaagtgaa actgttcctt tggtccacca
     8581 tcgcctttgc tattgcgtcg tgggagtgtg gtgtctccag cagcctgaat atgctgatct
     8641 tcttccgtgt gattcagggg attgtcgctg ggccgttgat cccactttcg caaagtcttt
     8701 tgctgaataa ttacccgcca gccaaacgct caatcgcgct ggcgttgtgg tcgatgacgg
     8761 tgattgtcgc gccaatttgc ggcccaatcc tcggcggtta tatcagcgat aattaccact
     8821 ggggctggat attcttcatc aacgtgccaa ttggcgtggc ggtggtgttg atgacactgc
     8881 aaaccctgcg cggacgcgaa acccgcaccg aacggcggcg gattgatgcc gtggggctgg
     8941 cactgctggt tattggtatc ggtagcctgc agattatgct cgaccgcggt aaagagctgg
     9001 actggttttc atcacaggaa attatcattc ttaccgtggt ggcggtggtg gctatctgct
     9061 tcctgattgt ctgggagctg accgacgata acccgatagt cgatctgtcg ttgtttaagt
     9121 cgcgcaactt caccatcggc tgcttgtgta tcagcctcgc gtatatgctc tacttcggcg
     9181 cgattgttct gctgccgcag ttgttgcagg aggtctacgg ttacacggcg acctgggcag
     9241 gtttggcctc tgcgccggta gggattattc cggtgatcct gtcgccgatt atcggccgct
     9301 tcgcgcataa actggatatg cggcggctgg taaccttcag ctttattatg tatgccgtct
     9361 gcttctactg gcgtgcctat acctttgaac caggtatgga ttttggcgcg tcggcctggc
     9421 cgcagtttat ccaggggttt gcggtggcct gcttctttat gccgctgacc accattacgc
     9481 tgtctggttt gccaccggaa cgactggcgg cggcatcgag cctctctaac tttacgcgaa
     9541 cgctggcggg gtctatcggc acgtcgataa ccacgaccat gtggaccaac cgcgagtcga
     9601 tgcaccatgc gcagttgact gagtcggtaa acccgttcaa cccgaatgcc caggcgatgt
     9661 acagtcaact ggaagggctt gggatgacgc aacagcaggc atcaggctgg attgcccagc
     9721 agatcactaa tcaggggctg attatttccg ccaatgagat cttctggatg tcagccggga
     9781 tattcctcgt cctgctgggg ctggtgtggt ttgctaaacc gccctttggc gcaggtggcg
     9841 gcggaggtgg tgcgcactaa gtacaactaa gccagttcat ttgaactggc ttttttcaat
     9901 taattgtgaa gatagtttac tgactaaatg tgcagttcct gcaacttctc tttcggcagt
     9961 gccagttctt cgttgctgtt gatgcgtacg tcacgttcca gaatgctacg cgcaatatcc
    10021 tgcgcttcct gcaacgagtg catctggtaa gtgccacact ggtagacgtt cagctccggg
    10081 atctgattct gatcctgcac tttcagcacg tcttccattg ccgctttcca ggcatcagca
    10141 acacgctgct catctggcgt accaatcaga ctcatataaa aaccggtgcg gcagcccatt
    10201 ggcgagatat cgataatctc tacaccatta ccgttaagat ggttacgcat aaaaccagca
    10261 aacaggtgct ccagagtatg gctccctctt tctggcatca cttctttgtt cggcacgcag
    10321 aagcgcagat cgaacacggt gattgcgtcg ccatgcgggg tgttcattgt tttcgccacc
    10381 cgaactgcag gcgcttccat ccgggtatga tcgactgtga agctatctaa caacggcatt
    10441 tagccacctc cggtaatttt tttaaaaatt ttctgaactc tttcttccca ggcgagtctg
    10501 agtatatgaa agacgcgcat ttgttatcat catccctgaa ttcagagatg aaattttggc
    10561 cactcacgag tggccttttt cttttctgtc aggcgtgttt ttccagccac accgcaaacg
    10621 gttcggtatc agcggtttcc atttcctgct gacggcgttc agatgcctcg cgctcggcta
    10681 caaaatcctc ttcgcgcaga atttccaacg gctcttcacg cagcagatta cggtaggctt
    10741 ctgcaaacgc tttgcctgtt ccgccaatac cagtatcaat catagacctt aagatacggg
    10801 cagagaaagt cagatcggga ttatcgaagc aggcgaccag ttcatcacac actttctgat
    10861 acgctttgcc gccgttaatg ctatccaacg tttgcgcgac gcgtttcaga tcgcggaaca
    10921 gatctttacc cacctgcggt aacgggaact gcgcggtttc gcagccgata cccagcgtca
    10981 ggcccggttt gcgaccttcg aggatcaccc ggttccagtt aacgcgtgta caggcaagtt
    11041 cgctactgct catttccggt gcatcagcca gcgcacacca gaccataaac aggtcgagga
    11101 atcgcacctg ctgttcatct acaccaatcg gcgagaacgg gttgatgtcc agcgaacgca
    11161 cttcaatata ttcaatgccg ccacgtaaca gcgcatcaga aggtgactcg ccgctgcggg
    11221 taacgcgttt tggacgaatc ggcgcataca gttcgttttc aatctgcagc acgttgctat
    11281 tgatttgcag cctcttaccg tctttctcaa taccaatctt cgcgtactct tccgatggcg
    11341 ttttgattgc ctgtttaagg cccgctacgt actcgtaaag atcgttgaag gtaataccaa
    11401 gattgctttg cgatttattg gtatagccga gatcgctcaa acgaagagag gtcgcatacg
    11461 gcaggtaata cataccgcac tcggttttct caaacggcag cgacgttggt tttccttgca
    11521 ggaaagaaga acaaatcgcc ggagatgcac caaacagata aggaatgacc caaccgaaac
    11581 gatagtaatt gcggataacg cggaaatagc ccgcagaaat tttctctttg gcatcagtgc
    11641 ccgagatatc accgcacttc gcttgccaga atgccattgg caaagagaaa ttgtagtgca
    11701 cgccggaaat ggtttgcatc agcgcgccgt agcgattttt cagcccttca cgatacagcg
    11761 ttttaaagcg tccggtgtta gaagtgccgt actgtgccag ttcgatgtcc tgaccttctg
    11821 cgatgtagca tggcatactt aacggccaca tccgctcatc gcccatattg cgcgccgtat
    11881 aacgatgcag atcgcgcata aaggtcaaca tatgttcaat atcaccatcc actggtgtaa
    11941 tgaattccag caatgcttcc gcaaaatcgg tagtaatcca tttgtgcgtc agtgcggaac
    12001 ctaatgcttc aggatgacct gttgttgcct gtgtgccatc agcattaaca cgcaaagttt
    12061 cgcgctccag cccacgctgt atccccttta acgcctgagg atgtttttcc agccaggcca
    12121 gcgcctgtga tacgtccggg atcaaattga cctcccgcct gtcaaaatcg ttttaattag
    12181 cataactgta atggtgacca tatgtgcagg cctacaatta gtgccaccac atcatgccct
    12241 gaacggtagc tgctgcaact gcaacatagc gtaaagcttt accaaggcac aaaaaaaaga
    12301 ttaccggtcc ccacgagatg cgcatccatc ccgctaacag acacagtaaa tcgccaacca
    12361 cgggcatcca gcttaataat agcgtgactg caccatagcg tttcagccag ccagtagctt
    12421 tctcttgcca gcgcgatgtt ttacgcaatg gaaagaaacg cccaaggata acgttagtta
    12481 accctccaag gctattaccc attgttgctg ttaaaactaa aacccaggga taactgatcc
    12541 cggaaagcaa cattgccacc agcacgactt cggagttgcc gggtaatagt gtagcgctga
    12601 gaaaactact ggcaaacaac gagaaaagcg ataacgcttc actcacagca agcgaacatc
    12661 cacggcgtcc atgcctgctg cacgggccgc ctgaataccg aaatcggcat cttcaaagac
    12721 cacacactgc gtcggttgca cgcccatacg ctgcgcgcac aacaaaaatg tgtctggcgc
    12781 gggtttatgg tgtttgacgt gatcagcagc gacgacggcg tcaaaataac ggcgtaatcc
    12841 caggtgcgcc agcaatgcct cagcgatggc gctttcactc cccgttccta cagccattgg
    12901 gcgacgacca tgccaacttt tcaccacttc aacaagagga agcggctcga cactatccag
    12961 cagcatactt cttactgctt ctgttttttc acgcgctaac gcatgcgggg cgagatcggc
    13021 ctgattcagc tcaataattg cctgagcaat acgccaggtg ggcgatccat taagcgcaat
    13081 cattgcctga acatcgtact gaagaccgta gtgccctaat acttcgcgcc acgctttacg
    13141 gtgcgtaggc tccgtatcca ggattgtgcc atccatatca aaaattaaac ctgcataacg
    13201 ctcgtacatg gtcttctcgc aagtcgaaaa atatgacgct actttagcgt aattgcttga
    13261 ttttgtcgct gatggcgaag gagaagaaaa ttcaggaaat ggataaagta gttatttaga
    13321 aatgagatat ttttgaagga aatttttggg agaa
//
LOCUS       DADMIB010000117        13313 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.117, whole genome shotgun sequence.
ACCESSION   DADMIB010000117 DADMIB010000000
VERSION     DADMIB010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13313
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.117"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..309
                     /locus_tag="JNZ89_003070"
     CDS             <1..309
                     /locus_tag="JNZ89_003070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936864.1"
                     /translation="VVLNGKINGNACIVVPLSTTRDHDKLNRGMHVEIASNVINGLQF
                     FDQQIRWAKADLVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAILLIN
                     "
     gene            508..789
                     /gene="ppiC"
                     /locus_tag="JNZ89_003071"
     CDS             508..789
                     /gene="ppiC"
                     /locus_tag="JNZ89_003071"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004097481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PpiC"
                     /protein_id="HAY8936865.1"
                     /translation="MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSG
                     KRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN"
     gene            complement(876..2351)
                     /gene="ilvC"
                     /locus_tag="JNZ89_003072"
     CDS             complement(876..2351)
                     /gene="ilvC"
                     /locus_tag="JNZ89_003072"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HAY8936866.1"
                     /translation="MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVG
                     CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
                     VNLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
                     LSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
                     GKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
                     ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPE
                     GAVDNAQLRDVNEAIRCHAIEQVGKKLRGYMTDMKRIAVAG"
     gene            2501..3391
                     /gene="ilvY"
                     /locus_tag="JNZ89_003073"
     CDS             2501..3391
                     /gene="ilvY"
                     /locus_tag="JNZ89_003073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HAY8936867.1"
                     /translation="MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLG
                     QPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAA
                     YSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSM
                     LENLAVVLIAPALPCPVRNQVSSEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPM
                     IYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCA
                     QKKRLHEPLIEAFWKILPNH"
     gene            complement(3388..4932)
                     /gene="ilvA"
                     /locus_tag="JNZ89_003074"
     CDS             complement(3388..4932)
                     /gene="ilvA"
                     /locus_tag="JNZ89_003074"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HAY8936868.1"
                     /translation="MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRL
                     DNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLG
                     VKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHP
                     MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA
                     CLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKD
                     LFEDVRAVAEPSGALALAGMKKYIAQHNIRGERLAHILSGANVNFHGLRYVSERCELG
                     EQREALLAVTIPEEKGSFLKFCQLLGGRAVTEFNYRFADAKNACIFVGVRLSRGLEER
                     KEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRF
                     LNTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLNELGYDCHDETNNPAF
                     RFFLAG"
     gene            complement(4935..6785)
                     /gene="ilvD"
                     /locus_tag="JNZ89_003075"
     CDS             complement(4935..6785)
                     /gene="ilvD"
                     /locus_tag="JNZ89_003075"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HAY8936869.1"
                     /translation="MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFT
                     QFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII
                     KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGN
                     GSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMG
                     GSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIG
                     ILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFS
                     QDCRWDTLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTG
                     PAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKAC
                     ALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELA
                     ARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG"
     gene            complement(6850..7779)
                     /gene="ilvE"
                     /locus_tag="JNZ89_003076"
     CDS             complement(6850..7779)
                     /gene="ilvE"
                     /locus_tag="JNZ89_003076"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HAY8936870.1"
                     /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
                     SHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIF
                     VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAK
                     AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSAL
                     PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEG
                     RCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ"
     gene            complement(7799..8062)
                     /gene="ilvM"
                     /locus_tag="JNZ89_003077"
     CDS             complement(7799..8062)
                     /gene="ilvM"
                     /locus_tag="JNZ89_003077"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HAY8936871.1"
                     /translation="MMQYQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQN
                     INIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA"
     gene            complement(8059..9705)
                     /locus_tag="JNZ89_003078"
     CDS             complement(8059..9705)
                     /locus_tag="JNZ89_003078"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HAY8936872.1"
                     /translation="MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLC
                     RHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAP
                     FIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKD
                     IQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE
                     FLATTKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDR
                     VTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPELQQPLNINDWQQYC
                     AQLRDEHAWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPE
                     NFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKI
                     VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
                     DTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
     gene            complement(9708..9758)
                     /locus_tag="JNZ89_003079"
     CDS             complement(9708..9758)
                     /locus_tag="JNZ89_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936873.1"
                     /translation="MNNSTKFCFSTFSTGN"
     gene            complement(9845..9943)
                     /gene="ilvL"
                     /locus_tag="JNZ89_003080"
     CDS             complement(9845..9943)
                     /gene="ilvL"
                     /locus_tag="JNZ89_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilv operon leader peptide"
                     /protein_id="HAY8936874.1"
                     /translation="MTALLRVISLVVISVVVIIIPPCGAALGRGKA"
     gene            10295..11815
                     /locus_tag="JNZ89_003081"
                     /pseudo
     CDS             10295..11815
                     /locus_tag="JNZ89_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418214.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
     gene            complement(11840..12178)
                     /gene="maoP"
                     /locus_tag="JNZ89_003082"
     CDS             complement(11840..12178)
                     /gene="maoP"
                     /locus_tag="JNZ89_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ori organization protein MaoP"
                     /protein_id="HAY8936875.1"
                     /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNE
                     LDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVE
                     GAEDYTDSDD"
     gene            12297..13136
                     /gene="hdfR"
                     /locus_tag="JNZ89_003083"
     CDS             12297..13136
                     /gene="hdfR"
                     /locus_tag="JNZ89_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator HdfR"
                     /protein_id="HAY8936876.1"
                     /translation="MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLG
                     VNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWEC
                     MLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQL
                     LGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQ
                     IAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLD
                     EVY"
     gene            complement(13232..13307)
                     /locus_tag="JNZ89_003084"
     tRNA            complement(13232..13307)
                     /locus_tag="JNZ89_003084"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13272..13274),aa:Trp,seq:cca)
BASE COUNT         3091 a         3600 c         3449 g         3173 t
ORIGIN      
        1 gtcgtgctca acggaaaaat taatggcaac gcatgtatcg tcgttccatt atcaaccact
       61 cgcgatcatg acaagttaaa tcgtggaatg catgttgaaa tagccagtaa tgttatcaat
      121 ggcctgcaat tctttgatca gcagattcgt tgggccaaag ccgacctggt acaacaagtc
      181 agtcgaaacc gattaaatag agcaaggact tacagagggt atcttaatca atgtttgcca
      241 catgagttgg ttgcagacat acagagggcg gtcatcaagt caatcaatgc catattgctc
      301 ataaattgac aataaaataa ccatccccga taatgacttt gtagcccata gaggccctaa
      361 gttttctccc cttgagggac ctgcgaagcc cggattttcc gggcttttgc catatatgta
      421 ccagcccctc cctgactgac aattacgtta gcatctgcgg atcatgctaa aatcgccgcc
      481 tgacaattat tcactcaagg cacgatcatg gcaaaaacag cagcagcact gcatatcctt
      541 gtaaaagaag agaaactggc tctggatctt ctcgagcaga ttaagaacgg tgccgatttc
      601 ggcaagctgg cgaagaaaca ctccatttgc ccatcaggca aacgcggcgg tgatttaggt
      661 gaattccgcc agggtcagat ggttccggcg ttcgataaag ttgtgttctc ttgtccggta
      721 ctggagccga ccggcccgct gcacacccag ttcggttacc acatcattaa ggtgctgtac
      781 cgtaactaat agcaaggcct tctccaggag aaggccttga gtgttttctc cctctccctg
      841 tgggagaggg tcggggtgag ggcatcagcg cgcacttaac ccgcaactgc aatacgtttc
      901 atatccgtca tatagccgcg cagtttctta cctacctgct caatcgcatg gcagcgaatc
      961 gcttcgttca catcacgcag ttgcgcgtta tctaccgcac cttccggaat agctttaccc
     1021 agatcgcccg gttgcagctc tgccataaac ggtttcagca acggcacaca agcgtaagag
     1081 aacagatagt taccgtactc agcggtatca gagataacca cgttcatttc gtacagacgc
     1141 ttacgggcga tggtgttggc aatcagcggc agctcgtgca gtgattcata atatgcagac
     1201 tcttcaatga tgccggaatc gaccatggtt tcaaacgcca gctcaacgcc cgctttcacc
     1261 atcgcgatca tcagtacgcc tttatcgaag tactcctgct cgccgatttt gccttcatac
     1321 tgcggcgcgg tttcgaaggc ggttttgccg gtctcttcac gccaggtcag cagtttctta
     1381 tcatcgttgg cccagtccgc catcataccg gaggagaatt cgccggagat gatgtcgtcc
     1441 atatgtttct ggaacagggg tgccatgatc tctttcagct gttcagacag cgcgtaagca
     1501 cgcagtttcg ccgggttaga gagacggtcc atcatcaggg tgatgccgcc ctgcttcagc
     1561 gcttcggtga tggtttccca accgaactga attagttttt ctgcgtatgc cggatcggtg
     1621 ccctcttcca ccagcttgtc gaagcacagc agcgagccag cctgcaacat accgcacagg
     1681 atggtttgct cacccatcag gtcagatttc acttccgcaa cgaaggacga ttccagcacg
     1741 cccgcacggt gaccaccggt tgctgccgcc catgctttag cgatcgccat gccttcgcct
     1801 ttcggatcgt tttccgggtg aacggcaatc agcgtcggta cgccgaatcc acgtttgtac
     1861 tcttcacgca cttcggtgcc agggcatttc ggcgcaacca tgactacggt gatgtcttta
     1921 cggatctgct cgcccacttc gacgatgttg aaaccgtgcg agtaacccag cgccgcgccg
     1981 tctttcatca gtggctgtac ggtgcgcact acgtcggagt gctgcttgtc tggcgtcagg
     2041 ttaaccacca aatccgcctg cgggatcagt tcttcgtaag tgcccacttt aaaaccgttt
     2101 tcggtcgctt tacgccagga tgcgcgcttc tcggcaatcg cttctttacg cagagcgtag
     2161 gagatatcga gaccagaatc acgcatgttc aggccctggt tcagcccctg tgcgccacag
     2221 ccgacgataa ccactttttt accctgaagg tagctcgcgc cgtcggcgaa ttcgtcgcgc
     2281 cccataaagc gacatttgcc cagctgtgcc agctgctggc gcaggttcag tgtattgaag
     2341 tagttagcca tggtgattcc tcgtgatgtt gtgcttctta ttgttcggtt cgcgtttgcg
     2401 agattgaatt cactatatga caggaaattt attgcggaaa ttgatatatt cacaacgtca
     2461 cattgcaatt tctgcaacgt caacattgag ggctgctcca ttggatttac gcgatctgaa
     2521 aaccttcctg catctggcgg aaagccgcca ttttggccgc agcgcgcggg cgatgcacgt
     2581 tagcccatcc acgctctcac ggcagattca gcgcctggaa gaagatcttg gtcagccgct
     2641 atttgtgcgc gataaccgca cggtgacgct gactgaagcg ggcgaagagc tgcgcgtttt
     2701 cgcccagcaa acgctgttgc agtatcagca gttgcgccac accatcgatc agcaagggcc
     2761 gtcgctctct ggcgaattac atatcttctg ctcggtgacc gctgcctaca gccatctgcc
     2821 accgattctc gaccgcttcc gcgcggaaca cccgtcggtg gagatcaaac taaccactgg
     2881 tgatgcggca gatgcgatgg aaaaggtagt cactggcgaa gcggatctgg cgattgccgg
     2941 gaaaccggag actctgcccg gcgcagtggc gttttcgatg ctggagaatc tggcagtagt
     3001 gctgattgcg cccgcgctgc cctgcccggt gcgtaaccag gtttcgtcag agaagccgga
     3061 ctggtctaca gtgccgttta tcatggccga tcagggaccg gtacgccgcc gcattgaact
     3121 gtggtttcga cgcaataaaa tcagcaaccc gatgatttac gccacggttg gcgggcatga
     3181 agcgatggta tcgatggtgg cgctcggctg tggcgtggcg ctgttgccgg aagtagtgct
     3241 ggaaaacagc cccgaaccgg tgcgtaaccg cgtgatgatt ttagagcgca gcgatgaaaa
     3301 aacgccgttt gaactgggcg tttgtgcgca gaaaaagcgg ctgcatgagc cgctgattga
     3361 ggcgttctgg aagattttgc cgaaccatta acccgccaaa aagaacctga acgccggatt
     3421 attggtttcg tcgtggcaat cgtagcccag ctcatttagc cgggtttcga aatccggttc
     3481 atggtcgccg agttcgaacg ccgccagtac gcgcccgtag tcggtgccat ggctgcgata
     3541 gtggaacaaa gaaatgttcc agtgcgtacc cagcgtgttg aggaagcgca gcagcgcgcc
     3601 cggtgattcc gggaattcga agctgtagag gcgttcctgc aacggatgtg acggacgccc
     3661 gccgaccata tagcgcacat gcaacttcgc catttcgtcg tcggagagat ccaccacgct
     3721 gtagccgccg tcgttgagca tctgcaaaat ttctttgcgc tcttcgaggc cgcggctcag
     3781 gcgcacgccg acaaagatgc aggcgttttt ggcatcggca aaacggtagt tgaactcggt
     3841 gaccgctcgc ccgccaagca gttggcagaa tttgaggaag ctgccttttt cttccggaat
     3901 ggtcaccgcc aacaacgctt cacgctgttc gcccagttcg cagcgttccg agacgtagcg
     3961 caggccgtgg aagttcacgt tggcaccgga aagaatatgc gccagccgtt cgccgcgaat
     4021 gttgtgctgg gcgatatatt ttttcattcc cgccagcgcc agcgcgccag agggttccgc
     4081 caccgcgcgc acatcttcga ataaatcctt catcgccgca cagatcgcat cactatcgac
     4141 ggtgatgatg tcgtcgagat actcctggca taaacggaag gtttcgtcac cgatgcgttt
     4201 taccgctacg ccttcagcaa atagccctac gcgcggcaga tcaaccggat gacccgcatc
     4261 cagcgctgct ttcaggcagg cggagtcttc cgcttctacg gcgatcactt tgatttgtgg
     4321 catcagttgt ttgatcagca ccgcaacgcc cgccgccaga ccgccgccgc cgactggcac
     4381 aaatacgcgg tcgagatggg cgtcctgctg gagcagttcc agcgccagcg tgccttgccc
     4441 ggcaatcacc atcggatggt cgaacggcgg cacccaggtg aacccctgct gctgtgacag
     4501 ttcgatcgct ttagctttcg cttcgtcaaa gttcgcgcca tgaagcagca cttcgccgcc
     4561 gaatccacgt accgcatcga ctttgatgtc ggcggtggcg gttggcataa cgatcagggc
     4621 cttcacgcct aaccgcgcag aagaaaacgc gacgccctgc gcgtggttac ccgcagaagc
     4681 agtgatcacg ccgtgcgctt tttgttcttc cgtcaggccc gccatcatgg cgtatgcgcc
     4741 gcgcagctta aagctgtgca ctggctggcg atcttcgcgc ttcaccagaa tgacgttatc
     4801 aagacgcgac gacagttttt ccattttttg tagcggcgta acctgcgctg cctcgtaaac
     4861 cggcgcgcgc agcactgctc ttaaatattc ggcaccttcc ggagcaccag acaggggttg
     4921 cgagtcagcc attattaacc ccccagtttc gatttatcgc gcaccgcacc tttgtcggcg
     4981 ctggttgcca ggctggcgta ggcgcgcagg gcaaaggaaa cctgacgttc acggtttttc
     5041 ggcgtccagg ctttgtcacc ccgagcttcc tgcgcttcac gacgcgccgc cagttcggca
     5101 tcgcttacct gtaactgaat gccacggttc gggatgtcga tagcgatcag gtcaccatct
     5161 tcaatcagac caatgctgcc gccgcttgcc gcttccggtg agacgtggcc gatggaaaga
     5221 ccagaggtgc cgccagagaa acgaccgtcg gtgatcagcg cacaggcttt accgagaccc
     5281 attgatttca ggaagctggt tgggtagagc atttcctgca tgccagggcc gcctttcggg
     5341 ccttcatagc ggatcaccac cacatcgccc gcgacaactt tgccaccgag gatcgcttct
     5401 accgcgtcgt cctggctttc gtacactttt gccgggccgg tgaatttgag gatgctgtca
     5461 tcgacgcccg cggttttcac gatgcagccg ttttcagcaa aattaccgta gagcaccgcc
     5521 aggccgccgt ctttgctgta ggcgtgttcc agcgagcgga tacagccgtt tgcgcgatcg
     5581 tcgtccagcg tatcccaacg gcaatcttgc gagaatgcct gggtggtacg gatacccgca
     5641 gggccggcgc ggaacatatt ttttaccgcg tcatcctggg tcagcataac gtcgtattgc
     5701 tccagcgttt gcggcaacgt caggccgagc acgtttttca catcacggtt cagtaacccc
     5761 gcgcgatcca gttcgccgag aataccgata acaccaccag cacggtgaac atcttccata
     5821 tggtatttct gggtgctcgg cgcaacttta cacagctgtg gaaccttgcg ggaaagctta
     5881 tcgatatcac tcatggtgaa gtcgatttcc gcttcctgcg ccgccgccag caggtgaagt
     5941 acggtgttag tcgatccacc catcgcgata tccagcgtca tggcgttttc aaacgccgcc
     6001 ttactggcga tattacgcgg cagtgcactt tcgtcgtttt gctcgtaata acgtttggtc
     6061 aattcaacaa tgcgtttacc agcattaagg aacagctgct tacggtccgc gtgggttgcc
     6121 agcagcgagc cgttgcctgg ctgcgacaaa cccagcgctt cggtcaggca gttcattgag
     6181 ttagcggtaa acatcccgga gcaggaaccg caggttgggc aggcggaacg ttcaacctga
     6241 tcgctctggg agtcagaaac tttcgggtct gcgccctgga tcatcgcatc aaccagatcg
     6301 agtttgatta tctgatcgga cagtttggtt ttcccggcct ccatcgggcc gccggaaaca
     6361 aagatcaccg gaatattcag gcgcagggaa gccatcagca tccccggggt gattttgtcg
     6421 cagttagaga tgcagaccat ggcgtcggcg cagtgggcgt tgaccatata ctcaacggaa
     6481 tcagcgatca gttcgcgaga tggaagtgaa taaagcatcc ccccgtggcc catggcaatc
     6541 ccatcatcca ccgcaatggt gttgaactct ttggcaacgc cgccagccgc ttcaatttgt
     6601 tcggcgacca gtttaccgag atcgcgcaga tggacgtgac ccggtacaaa ttgggtgaac
     6661 gagttcacaa ccgcgataat cggcttgcca aaatcggcgt cggtcattcc ggtggcgcgc
     6721 cacagcgcac gagcacccgc catattacga ccatgagtgg tggtggcgga acggtactta
     6781 ggcatacttt atttactccc agtgtctgtc tcgtaaatgg gacggtgcgt gccgtcccat
     6841 tttttgtatt tattgattaa cttgatctaa ccagccccat ttatcttcgg tttcgccagt
     6901 gaagaggccg aagaaggctt gctgaatgcg tttggtaacc gggccacaac ggccttcgcc
     6961 aacctgaata ccgtctacgc tgcgcactgg cgtgatttct gccgcagtac cggacataaa
     7021 cacttcatcc gccaggtaca gggattcgcg cgacagcacc tgctcacgca cttcaattcc
     7081 cagctctttc gccagtttga tgatggcatc acgggtaata cccggcagcg cggatgaggt
     7141 aaacggtggg gtgaacagca cgccgtcttt cacttcaaac aggttttcac ctgcgccttc
     7201 agagatgtaa ccgttcacat ccagcgcgat accttcctga taaccgtggc ggcgcgcttc
     7261 gctacccacc agcagggaag agaggtagtt accaccggct tttgccgccg tcgggatggt
     7321 gtttggtgct gcgcggttcc aggaggaaac catcgcatcg atcccctgct ccagcgcttc
     7381 tgcgcccaga tacgctcccc acgggaaagc agcgataatc acgtcggttg agtatcccgc
     7441 tggcgggttt actcccatgc caacatcacc gacgaagatc agcggacgga tataggcgct
     7501 ggtgagatta tttttgcgga tcacgtcacg acaagcttcc atcagctcat caatgctctg
     7561 cgaaaccggg aagcgataga ttttggcgga gtcatgcaga cgctgcatat gctcacgatg
     7621 gcggaataca accggtcctt tgtgcgagtc gtagcaacgg atgccttcaa aaaccgaagt
     7681 gccatagtgc agcgcgtgcg acatcacatg caccttcgcg tcttcccagc gaaccatctc
     7741 cccattgaac caaatgtaat cagctttctt cgtggtcatt tttatattcc ttttgcgctc
     7801 aggcgcggat ttgttgtgat gtggttgtgc tctggcagat ggcaacgtgt gcgacgtcca
     7861 ccagtttatt taactgacta aacagtaagt cgaccgaccg tgggctggca acggtcaatt
     7921 cgatatttat attttgtgca tcgctggcgg cggccatatt cattgagcag acgtggaaac
     7981 cacgatgacg caccacgcgt aaaacacgtt ctaaggtttc cggattgaag cgagccgata
     8041 cattgacctg atattgcatc atgataattt ctccaacatt tctgaattac tggcgccagg
     8101 cggcaccagc ggccagacgt tctcaagttc gtcgattgag acatgaagca ggtatggccc
     8161 atcactgttc agcatggtgt cgagtgccgc ttcaacctgg tctttacggg tgatgtgttg
     8221 gccagggatg ccgaaggcgc tggctaacat gaggaaatcg gggttatcag taagggtggt
     8281 ttcgctgtat cgttcctgaa aaaacagttg ctgccattgt cgaaccatcc ctaaccgttg
     8341 gttatcgagt aagacgattt tcaacggtaa ctgcttgcgt tttacggtgc ccagctcttg
     8401 cacattcatc atgaaagagc cgtcaccgga gatacagacg acggtatcgt tcggtcgcgc
     8461 gacttgtgcg ccaaccgccg ctggtaaacc aaaacccata gtgcctaagc cgctggaggt
     8521 gatgaaattt tccgggcgag tgtgggcgat gtgttgcgca gcccacatct ggtgctgccc
     8581 cacatctgtg gtcacgacgc aatccgcagg tttacgatcc gacagttgtt ttaacaacaa
     8641 cggcgcgtag atagcgtcgc cgggatggtc gtaacgccag gcatgttcat cacgcagctg
     8701 cgcgcagtat tgctgccagt cattgatatt taacggctgc tgtaattctg gtaacagagc
     8761 atttaaatca ccttgtaatg ccacatgtgc ctgacgcagc ttgttcattt ctgccgggtc
     8821 gatatccata tggataacgc tggcgtgtgg tgcgaaggtg ttcagtttgc cggtcacccg
     8881 gtcatcaaaa cgtgcaccca cggcgatcag caagtcgcac tcctgcaccg cgaagttcgc
     8941 cgctttggtg ccatgcattc ccagcatgcc cagatagtac ggataatctg cttcaactgc
     9001 gcccagccct ttcagcgtgc aggtggcagg catttttgtg gtagcgagaa attctcgtaa
     9061 agcaggaact gcctgcgcca tacccacgcc accaccaacg tacagcatcg gtttttgcgc
     9121 ttttgccagc atctggcgcg cttgctcaac ttcggcatgt gggaaagtca cttcgttttc
     9181 aacggtggtg aaccacggtt ccaggtcacc gctggctagc tggatatctt ttgggatatc
     9241 gaccagaacc ggaccaggac gacctgagct ggcaacgtcg aatgcttcag ccataatgcg
     9301 cggcaactct tccagcgact gcaccagaaa gctgtgcttg gtacaggcta acgacaatcc
     9361 caggacatcc acttcctgaa atgcatcagt gccgataaac ggtgcggaca cttgaccggt
     9421 gatggcaaca acagggatag aatctaacag tgcgtccgca agcccggtta tcaggttggt
     9481 tgcgcccgga ccagacgtgg cgatacatac gccagttttg ccggtagcac gggcataacc
     9541 gatagccgcc attgccgcac cctgctcatg tcggcacagc aagtgctcca cgccgccgtc
     9601 atacaatgca tcgtaaaccg gcataattgc gccacccgga taaccgaaaa cggtgttcac
     9661 accctgtgcc cgcaacgcat gtaccaccca ctgtgcgcca ttcatagtta gttccccgtg
     9721 ctgaatgttg agaaacagaa ttttgtgctg ttattcattg tctgctcctc ggttatgttt
     9781 ttaaggtcaa aaaaaacccc cggacctttc ggtgcggggg tcttagttcg ttaaggcttg
     9841 atttctaagc ctttcctcgt ccaagtgcag ccccgcacgg tgggataata atcaccacca
     9901 cgctaatcac gaccaggcta atcactcgta gaagggctgt cattttgtct tttcttgcat
     9961 cttgttcgaa ggaatgccta aagagttacc ataggttttg taaatagtac aagatatttt
    10021 ttggccgatt tttatgatgc gtttaataat ttcaatataa gttgttgttt tttaaaaata
    10081 aaatagtgag taaaaaaatt caatttcagt atgaatgttg ttcccttcct cgtagttcat
    10141 cctttgtccg ctgcattttt gcgagcatca ttccaccgcc agaacaactc aacttcactt
    10201 gcacaaataa acaggaatca gccactaaaa ttcacgaatt agcgggctac agcagcgata
    10261 tcttatgcac ataatggtga ctcaaggagg gcttatgtca ctgtcaattg ttcatacccg
    10321 cgcagccctg ggagtaaatg cgcccccgat cactgttgag gtacatatca gtaaaggtct
    10381 acccggctta acgaaggtgg gcttaccaga aacaacggta aaagaagctc gcgatcgcgt
    10441 gcgcagcgcc attatcaata gcggatatga atatccggcg aaaaaaatca ccatcaacct
    10501 ggctccagct gatctgccaa aagaaggggg acgatatgat ttacctatcg ccattgcgtt
    10561 gctggcggcc tcagaacagc ttacagccaa taagttagat gaatatggat tagtcggaga
    10621 actggcgctt acaggcgctc tgcgtggcgt tcccggcgca atctccagta caactgaagc
    10681 tattaagtcg ggcagaaaaa ttatcgtcgc gaaagataac gaagatgaag tggggctaat
    10741 taacggtgaa ggatgcctga tagccgatca tctgcaagct gtctgtgcgt ttctggaagg
    10801 taagcacgct ctcgaacgcc cgaaaccaac tgatacagta tcccgggcgc tacaacatga
    10861 tctcagtgat gttatcggtc aggaacaagg aaagcgagga ctggaaatta ccgccgctgg
    10921 cgggcacaac cttttactga ttgggccgcc gggaacaggt aaaacaatgc tcgccagccg
    10981 tattaatggc ctgttgccag atttaagcaa tgaagaggca ctggagagtg ctgcgatatt
    11041 aagtctggta aatgctgaat cagtacaaaa acaatggcgg cagcgcccgt tccgctcacc
    11101 tcatcacagt gcatcgttaa ctgcgatggt aggcggtggc gcaattccag ggcccggtga
    11161 aatttcgctg gcgcataacg gcgtgctttt tcttgatgag ttacctgaat ttgaaaggcg
    11221 tacactggat gccttgcgag agccgattga atccgggcag atccatcttt cacgcacgcg
    11281 agcaaaaata acctatccag cccgtttcca gcttgtcgcg gcgatgaatc ccagccctac
    11341 cggacattat cagggaaacc ataaccgctg cacaccagag caaacgctgc gttatctcaa
    11401 ccgactctct ggtccctttc tcgaccgctt cgatctctca ctggagatcc cattaccgcc
    11461 tcccggtatt ttgagtaaaa cggtagtgcc gggagaaagc agcgccaccg ttaaacaacg
    11521 cgtaatggcc gccagagagc gccaatttaa gcggcagaat aaactgaacg cctggctgga
    11581 tagtccggaa atacgccaat tctgcaaact tgagagcgaa gatgcgatgt ggctggaaga
    11641 aacgctgatc catctggggt tatcgattcg tgcctagcag cggttattga aagttgcacg
    11701 aaccattgct gatattgatc agtctgacat tatcacacgt caacatttgc aggaggcagt
    11761 tagctatcga gcgattgacc gtttgctcat ccatctgcag aaactactga cataaaaaaa
    11821 gggcatttcg ccctttttat taatcgtcag aatcggtgta gtcttcagca ccttcaacct
    11881 gcggtttacc gccggaaagg gtgtgaaaac gttttggacg cttaatacgc gtcatatact
    11941 tggaccacac gcgttctgct tctgtcactg gctcacgttc gccacggcat actgctacga
    12001 agagtttctc ttcctcggta accggctcgc gtttgccaag atccaactca ttgaaggcat
    12061 aaccatgacg ctcaagcagt tgtgcctctt tgatggtgaa atcaccatga cgagagaatc
    12121 cacgtggata atgtttattg tcgaaatatc gattagtcgt cgtaaagctt tccgccatcc
    12181 tgcacgctcc taattctttg accgagctag ttatggcgcg gagtattagt tacgcttgac
    12241 agagtgtaaa acaaaacatt taaatcataa cgacaaataa ttttgcggag agcactgtgg
    12301 atacggaatt gttaaaaact ttcctggaag ttagccgaac gcgtcacttt ggtcgagcgg
    12361 ctgaatcgct ctatctgacc cagtcagcag tgagctttcg aatcagacaa ctggaaaatc
    12421 aactgggtgt gaaccttttc acccgccaca gaaacaatat ccgtttaacc gctgccggtg
    12481 aaaaactact gccttatgca gaaacgctca tgagcacctg gcaggccgcc cgcaaggagg
    12541 tggcgcatac ctcacgacat aacgagtttt ctatcggtgc cagcgcctca ttgtgggaat
    12601 gtatgcttaa tcagtggctg ggacgtttgt atcaaaatca ggatgcccat acaggcttac
    12661 agttcgaagc gcgaattgcc caacggcagt ctctggtaaa acagctgcat gaacgccagc
    12721 ttgatcttct tattaccact gaagcgccca aaatggacga atttagtagt cagttgctgg
    12781 gatatttcac tttagcgctt tataccagtg ccccttcaaa actaaaggga gatcttaatt
    12841 atctgcgact tgagtggggg ccagattttc aacagcatga ggcaggtttg atcggtgctg
    12901 acgaagtgcc cattctgaca accagttctg ctgaactggc acagcaacag attgcgatgc
    12961 ttaatggttg cacctggcta cccgtcagct gggcgcgtaa aaaaggcggc ctgcataccg
    13021 ttgtcgatag cacaacactt tcacggccgc tttatgccat atggctgcaa aatagcgata
    13081 aaaatgcgtt gattcgcgat cttttgaaaa ttaacgtgct ggatgaagtg tattaatatg
    13141 aatggctggc aaggatgccg gtagaaggat ttacttcgga gagggttatt tcagataaaa
    13201 aaaatcctta gctttcgcta aggatgattt ctggcagggg cggagagact cgaactccca
    13261 acacccggtt ttggagaccg gtgctctacc aattgaacta cgcccctaat tag
//
LOCUS       DADMIB010000118        13097 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.118, whole genome shotgun sequence.
ACCESSION   DADMIB010000118 DADMIB010000000
VERSION     DADMIB010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13097
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.118"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            176..1150
                     /gene="cysB"
                     /locus_tag="JNZ89_003085"
     CDS             176..1150
                     /gene="cysB"
                     /locus_tag="JNZ89_003085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012017585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HAY8936877.1"
                     /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
                     GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
                     QTRYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVM
                     LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP
                     RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR
                     STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK"
     gene            1445..1609
                     /locus_tag="JNZ89_003086"
     CDS             1445..1609
                     /locus_tag="JNZ89_003086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmiA family putative membrane protein"
                     /protein_id="HAY8936878.1"
                     /translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVV
                     VALLIWKVWG"
     gene            1612..1779
                     /locus_tag="JNZ89_003087"
     CDS             1612..1779
                     /locus_tag="JNZ89_003087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936879.1"
                     /translation="MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFI
                     ELFAEDDQPKQ"
     gene            1893..1988
                     /locus_tag="JNZ89_003088"
     CDS             1893..1988
                     /locus_tag="JNZ89_003088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936880.1"
                     /translation="MINTNMKYWSWMGAFSLSMLFWAELLWIITH"
     gene            2152..4827
                     /gene="acnA"
                     /locus_tag="JNZ89_003089"
                     /pseudo
     CDS             2152..4827
                     /gene="acnA"
                     /locus_tag="JNZ89_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415792.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
     gene            complement(4891..5481)
                     /gene="ribA"
                     /locus_tag="JNZ89_003090"
     CDS             complement(4891..5481)
                     /gene="ribA"
                     /locus_tag="JNZ89_003090"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HAY8936881.1"
                     /translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT
                     PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI
                     RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
                     AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK"
     gene            5651..6415
                     /gene="pgpB"
                     /locus_tag="JNZ89_003091"
     CDS             5651..6415
                     /gene="pgpB"
                     /locus_tag="JNZ89_003091"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase B"
                     /protein_id="HAY8936882.1"
                     /translation="MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV
                     TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE
                     PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP
                     SGHTMFAASWALLAVGLLWPRRRTLTIAILLLWATGVMGSRLLLGMHWPRDLVVATLI
                     SWALVAVATWLAQRICGPLTPPAEENREIAQREQES"
     gene            6564..6872
                     /gene="lapA"
                     /locus_tag="JNZ89_003092"
     CDS             6564..6872
                     /gene="lapA"
                     /locus_tag="JNZ89_003092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA"
                     /protein_id="HAY8936883.1"
                     /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
                     LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
                     "
     gene            6879..8048
                     /gene="lapB"
                     /locus_tag="JNZ89_003093"
     CDS             6879..8048
                     /gene="lapB"
                     /locus_tag="JNZ89_003093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HAY8936884.1"
                     /translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN
                     FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
                     YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA
                     IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNRARVSI
                     MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV
                     EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
                     KESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL"
     gene            8241..8978
                     /gene="pyrF"
                     /locus_tag="JNZ89_003094"
     CDS             8241..8978
                     /gene="pyrF"
                     /locus_tag="JNZ89_003094"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HAY8936885.1"
                     /translation="MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLK
                     VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG
                     GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQK
                     CGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSDAGDQRRIMTPEQALAAGVDYM
                     VIGRPVTQSVDPAQTLKAINASLQRSA"
     gene            8978..9304
                     /gene="yciH"
                     /locus_tag="JNZ89_003095"
     CDS             8978..9304
                     /gene="yciH"
                     /locus_tag="JNZ89_003095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415798.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HAY8936886.1"
                     /translation="MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKG
                     KGVCLITGIDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMK
                     VKLAGG"
     gene            complement(9430..9648)
                     /gene="osmB"
                     /locus_tag="JNZ89_003096"
     CDS             complement(9430..9648)
                     /gene="osmB"
                     /locus_tag="JNZ89_003096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmB"
                     /protein_id="HAY8936887.1"
                     /translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG
                     GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
     gene            complement(9917..10666)
                     /locus_tag="JNZ89_003097"
     CDS             complement(9917..10666)
                     /locus_tag="JNZ89_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8936888.1"
                     /translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL
                     SYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLA
                     RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF
                     SKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEVIVLTDSSKFGAVHSYSIGPVE
                     RFNRVITDSKIRASDLMHLEHSKLTVHVVDI"
     gene            complement(10756..10929)
                     /locus_tag="JNZ89_003098"
     CDS             complement(10756..10929)
                     /locus_tag="JNZ89_003098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936889.1"
                     /translation="MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVA
                     ESTPDIPKAPWEI"
     gene            complement(11076..13061)
                     /gene="pdeR"
                     /locus_tag="JNZ89_003099"
     CDS             complement(11076..13061)
                     /gene="pdeR"
                     /locus_tag="JNZ89_003099"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY8936890.1"
                     /translation="MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL
                     QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV
                     ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF
                     MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKSEIFLIC
                     SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN
                     FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA
                     SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF
                     CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPER
                     GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT
                     IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY
                     SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE
                     DAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA"
BASE COUNT         3334 a         3083 c         3293 g         3387 t
ORIGIN      
        1 tcgcgaaagc ggcccttttt tattgcatat tattttttct tcacacctat acactaaggc
       61 tataaatgat atagtggtta tagttagcac cttttttatt attaaatcgt attagtcacc
      121 cgccaggtgt gacgaaaaaa cgatgttctg atggcgtcta agtggatggt ttaacatgaa
      181 attacaacaa cttcgctata ttgttgaggt ggtcaatcat aacctgaatg tctcatcaac
      241 agcggaagga ctttacacat cacaacccgg gatcagtaaa caagtcagaa tgctggaaga
      301 cgagctaggc attcaaattt tttcccgaag cggcaagcac ctgacgcagg taacgccagc
      361 agggcaagaa ataattcgta tcgctcgcga agtcctgtcg aaagtcgatg ccataaaatc
      421 ggttgccgga gagcacacct ggccggataa aggctcactg tatatcgcca ccacgcatac
      481 ccagacacgc tacgcattac caaacgtcat caaaggcttt attgagcgtt atcctcgcgt
      541 ttctttgcat atgcaccagg gctcgccgac acaaattgct gatgccgtct ctaaaggcaa
      601 tgccgatttc gctatcgcca cagaagcgct gcatctgtat gaagatttag tgatgttacc
      661 gtgctaccac tggaatcggg ctattgtagt cactccggat cacccgctgg caggcaaaaa
      721 agccattacc attgaagaac tggcgcaata tccgttggtg acatatacct tcggctttac
      781 cggacgttca gaactggata ctgcctttaa ccgcgcaggg ttaacgccgc gtatcgtttt
      841 cacggcaacg gatgctgacg tcattaaaac ttacgtccgg ttagggctgg gggtaggggt
      901 cattgccagc atggcggtgg atccggtcgc cgatccggac cttgtgcgcg ttgatgctca
      961 cgatatcttc agccacagta caaccaaaat tggttttcgc cgtagtactt ttttgcgcag
     1021 ttatatgtat gatttcattc agcgttttgc accgcattta acgcgtgatg tcgttgatgc
     1081 ggctgtcgca ttgcgctcta atgaagaaat tgaggtcatg tttaaagata taaaactgcc
     1141 ggaaaaataa tttcttgcgt tattttcggc accttttatg tagcgaaggt gccggaatat
     1201 attctctttt gttacttatt tttataccgt gcacaatatt tttatccctc atatttatag
     1261 ggtaaattac ctgtaaagta gtgtctaatt acccgcctcg caaattccag ttttcaaata
     1321 tctatttcag gtcaaaagat tgaattattc actggagacg attcgtaaat tcgctggatt
     1381 tttgactaaa gtttctttag gatttgtctc atcgtatgat taattacacc aatcgttcaa
     1441 cgtcttgctg ataagtgatg gcgattatat gaggttagca atgccttctg gaaatcagga
     1501 accccgccgc gatcctgaat taaaacgtaa agcctggctg gcggtttttc ttggttctgc
     1561 acttttctgg gtggttgtcg cactgctgat ttggaaagtg tggggataac tatggtcggt
     1621 caggagcaac tggagtcgtc accattatgc cagcatagtg acaatgaaac agaaacgaaa
     1681 cgggaatgtt ccgtcgttat tccagacgac tggcaactaa catcgcagca gcaagccttt
     1741 atagaactgt ttgctgaaga tgatcagccg aaacaataat tatcatcatt cttattaccc
     1801 atttttaatg aattaaaggg cttttaatac accgcagcaa taacagcttg agttatctca
     1861 acacaaaata ataaccgtta agggtgtagc ctatgatcaa cacaaatatg aaatattggt
     1921 cctggatggg cgcgttttct ctgtcgatgc tcttctgggc cgaactcctc tggatcatta
     1981 ctcactgatc cttgaccccg ctgcggcggg gttgtcattt gctttgccac aaggtttctc
     2041 ctcttttatc aatttgggtt gttatcaaat cgttacgcga tgtttgtgtt atctttaata
     2101 ttcaccctga agagaatcag ggcttcgcaa ccctgtcatt aaggaggagc tatgtcgtca
     2161 accctacgag aagccagtaa ggacacgttg caggccaaag ataaaactta ccactactac
     2221 agcctgccgc ttgctgctaa atcactgggc gatatcaccc gtctacccaa gtcactcaaa
     2281 gttttgctcg aaaacctgct gcgctggcag gatggtaact cggttaccga agaggatatc
     2341 cacgcgctgg caggatggct gaaaaatgcc catgctgacc gtgaaattgc ctaccgcccg
     2401 gcaagggtgc tgatgtagga ctttaccggc gtacctgccg ttgttgatct ggcggcaatg
     2461 cgcgaagcgg ttaaacgcct cggcggcgat actgcaaagg ttaacccgct ctcaccggtc
     2521 gacctggtca ttgaccactc ggtgaccgtc gatcgttttg gtgatgatga ggcatttgaa
     2581 gaaaacgtac gcctggaaat ggagcgcaac cacgaacgtt atgtgttcct gaaatgggga
     2641 aagcaagcgt tcagtcggtt tagcgtcgtg ccgccaggca caggcatttg ccatcaggtt
     2701 aacctcgaat atctcggcaa agcagtgtgg agtgaattgc aggacggtga atggattgct
     2761 tatccggata cactcgttgg tactgactcg cacaccacta tgatcaacgg ccttggcgtg
     2821 ctggggtggg gcgtgggtgg gatcgaagca gaagccgcaa tgttaggcca gccggtttcc
     2881 atgcttatcc cggacgtagt gggctttaaa cttaccggta aattacgtga aggtattacc
     2941 gccacagacc tggttctcac tgttacccaa atgctgcgca aacatggcgt ggtggggaaa
     3001 ttcgtcgaat tttatggtga tggtctggat tcactaccgc tggcggatcg cgccaccatt
     3061 gccaatatgt cgccagaata tggtgccacc tgtggcttct tcccaatcga tgctgtaacc
     3121 ctcgattaca tgcgtttaag cgggcgcagc gaagatcagg ttgagttggt cgaaaaatat
     3181 gccaaagcgc agggcatgtg gcgtaacccg ggcgatgaac cgatttttac cagtacgtta
     3241 gaactggata tgaatgacgt tgaagcgagc ctggcagggc caaaacgtcc acaggatcgc
     3301 gttgcactgc ccgatgtacc aaaagcattt gccgccagta acgaactgga agtgaatgcc
     3361 acgcataaag atcgccagcc ggtcgattat gttatgaacg gacatcagta tcagttacct
     3421 gatggcgctg tggtcattgc tgcgataacc tcgtgcacca acacctctaa cccaagtgtg
     3481 ctgatggccg caggcttgct ggcgaaaaaa gccgtaactc tgggcctcaa gcggcaaccg
     3541 tgggtcaaag cgtcgctggc accgggttcg aaagtcgttt ctgattatct ggcaaaagcg
     3601 aaactgacac cgtatctcga cgaactgggg tttaaccttg tgggatacgg ttgtaccacc
     3661 tgtattggta actctgggcc gctgcccgat cctatcgaaa cggcaatcaa aaaaggcgat
     3721 ttaaccgtcg gtgcggtgct gtccggcaac cgtaactttg aaggccgtat ccatccgctg
     3781 gttaaaacta actggctggc ctcgccgccg ctggtggttg cctatgcgct ggcgggaaat
     3841 atgaatatca acctggctgc tgagcctatt ggtcatgatc gtaaaggcga cccggtttat
     3901 ctgaaagata tctggccatc ggcacaggaa attgcccgtg cggtagaaca agtctccaca
     3961 gaaatgttcc gtaaagagta cgcagaagtt tttgaaggca cagcagagtg gaaggaaatt
     4021 aacgtcacac gatccgatac ctacggttgg caggaggatt caacctatat tcgcttatcg
     4081 cctttctttg atgaaatgca ggcaacacca gcacctgtgg aagatattca cggtgcgcgg
     4141 atcctcgcaa tgctggggga ttcagtcacc actgaccata tctctccggc gggcagtatt
     4201 aagcccgaca gcccggcggg tcgatatcta caaggtcggg gtgttgagcg aaaagacttt
     4261 aactcctacg gttcgcggcg tggtaaccat gaagtgatga tgcgcggcac cttcgccaat
     4321 attcgcatcc gtaatgaaat ggtgcctggc gttgaagggg ggatgacgcg gcatttacct
     4381 gacagcgatg ttgtctctat ctatgatgcc gcgatgcgct ataagcagga gcaaacgccg
     4441 ctggcggtga ttgccgggaa agagtatgga tcaggctcca gccgtgactg gacggcaaaa
     4501 ggtccgcgtc tgcttggtat tcgtgtggtg attgccgaat cgtttgaacg aattcaccgt
     4561 tcgaatttaa ttggcatggg catcttgccg ctggaatttc cgcaaggcgt gacgcgtaaa
     4621 acgttagggc taaccgggga agagaagatt gatattggcg acctgcaaaa tctacaaccc
     4681 ggcgcgacgg ttccggtgac gcttacgcgc gcggatggta gccaggaagt cgtaccctgc
     4741 cgttgtcgta tcgacaccgc gacggagttg acctactacc agaacgacgg cattttgcat
     4801 tatgtcattc gtaatatgct gaagtaacaa gtatttgctt gccggttatt ttgcttccgg
     4861 caagcaaatt aattccacaa tgcgagaggg ttatttgttc agcaaatgac ccattttctc
     4921 ggctttggta tcgagataat gttcgttatt ggggttacga cctacaatca atggtacgcg
     4981 ttcaacaata ttaatccctg cttcggtcag aatttcgact tttttcgggt tattggttaa
     5041 caagcggact tcattgacgc caaggagttt gaacatatca gcgcaaagag tgaagtcgcg
     5101 ctcatcagcg gcgaagccta actggtggtt agcctctacg gtatcgtaac cttgatcctg
     5161 cagtgcgtaa gcgcggattt tattcagcag accaatgtta cgaccttcct gacggtgata
     5221 cagcaaaata ccacggcctt cctcggcaat ttgcgtcaat gccgcttcga gctggaagcc
     5281 acaatcgcag cgcaagctga acagggcgtc accggtcaga cattcggaat ggacgcgcgc
     5341 aagtaccggg gtatgcccgg aaatatcgcc atagactagc gcgacatgat cgtgtccggt
     5401 tgccagttct tcaaatccca ccatcaggaa atcgccccat ggggttggca gtttggcttc
     5461 tgccacacgt ttaagctgca tgaaattctc cagataatgc tggttctgta ttggcttatt
     5521 ttgccataac gagaaggggt tcacctaatc acgacgcgtc gatcgttcac ggaatggcac
     5581 aaatctgtca atttttcctg gaactggcgt tttcagttat gattgtggga cttatcaaaa
     5641 aggagaggcc atgcgttcga ttgccagacg taccgcagtg ggagctgcac tattgcttgt
     5701 catgccagta gccgtatgga tttctggctg gcgttggcaa cctggagaac aaagttggct
     5761 actaaaagcg gctttttggg ttactgaaac tgtcacccag ccctggggcg tcattacaca
     5821 tttgatttta ttcggctggt ttctctggtg tctgcgtttt cgcattaagg ctgcctttgt
     5881 attatttgcc attctggcgg ccgcaatcct tgtgggacaa ggcgttaaat cctggatcaa
     5941 agacaaagtc caggaaccac gaccttttgt tatctggctg gaaaaaacac atcatattcc
     6001 ggttgatgag ttctacactt taaagcgagc agaacgcgga aatctagtga aagaacagtt
     6061 ggctgaagag aaaaatatcc cacaatattt gcgttcacac tggcagaaag agacggggtt
     6121 tgcctttcct tccggtcaca cgatgtttgc tgccagttgg gcactgctgg ccgttggttt
     6181 gctgtggccg cgtcggcgaa cgttaaccat tgctatcttg ctgctctggg caacgggagt
     6241 catgggaagc cgcctgctgc tcgggatgca ttggccacgc gatctggtag tagctacatt
     6301 gatttcgtgg gcgctggtgg cggtggcaac gtggcttgcg caacgaattt gtgggccatt
     6361 aacaccacct gcggaagaaa atcgcgaaat agcgcaacga gaacaagaaa gttaacgctg
     6421 gttgattttc cgaatttagc ccttaaatca tcaacaatgc gcgtggatgc catttcgcag
     6481 acggcgcgaa aatggtactt taaagggcta ttgcggtaag ttgaccataa tttattcgct
     6541 ctaaccacat aacgggaagt aatgtgaaat atttactcat tttcttactg gtgttagcga
     6601 tcttcgtgat ttcggtcacg ttgggtgcgc agaacgatca acaggtgacg tttaattatc
     6661 tgttagcgca aggggagtac cgtatttcca cattgctggc ggtattgttt gctgcggggt
     6721 ttgctatcgg ttggttgatt tgtggcctgt tctggctgcg agttcgtgtt tccctggcgc
     6781 gcgctgaacg taaaataaag cgactggaaa accagctttc acccgcgact gacgtggctg
     6841 tagtgccgca ctcgtcagcg gcgaaggaat aactttctat gctggagttg ttgtttctgc
     6901 ttttgcctgt agccgctgcc tatggctggt atatgggccg cagaagtgcg caacaaaaca
     6961 agcaagatga agccaaccgc ttgtcgcgtg attacgtagc gggggttaac ttcctgctta
     7021 gtaatcaaca ggataaagcg gtagacctgt ttctcgatat gcttaaagag gatacaggca
     7081 ccgttgaagc ccaccttacg ctcggaaacc tgttccgttc gcgtggcgaa gttgatcgcg
     7141 ctattcgcat ccatcagacc ctaatggaaa gcgcctcgct gacctatgaa cagcgtctgt
     7201 tggcgattca acaactaggg cgtgattaca tggccgccgg gttatacgac cgcgcggaag
     7261 acatgttcaa tcagctgacc gatgaaactg acttccgcat tggcgctctg caacagttgc
     7321 tacaaatcta ccaggctacc agtgagtggc agaaagcaat tgatgttgcc gaacgcctgg
     7381 tgaagctggg taaagataaa cagcgcgtcg aaattgccca tttctactgt gagttagccc
     7441 tgcagcatat ggccagcgac gatctcgatc gtgccatgac cttgctaaaa aaaggggcgg
     7501 cggcagataa aaacagagcc cgcgtatcca tcatgatggg acgcgtgttt atggcgaaag
     7561 gagaatacgc caaagccgtc gaaagtttgc aacgcgtgat atcccaggac agagaactgg
     7621 tcagcgaaac gctggaaatg ttgcaaacct gctatcagca gttgggtaaa actgccgaat
     7681 gggcagaatt cctgcaacgc gcggtggaag agaacaccgg tgccgatgct gaattgatgc
     7741 ttgctgatat catcgaagcg cgcgacggta gtgaggccgc acaggtctat attacgcgcc
     7801 agcttcagcg tcatccgacc atgcgtgtgt tccataagtt aatggattac cacttaaatg
     7861 aagcggaaga agggcgtgcc aaagagagcc tgatggtgct gcgtgacatg gttggcgaaa
     7921 aggtacgtag taagcctcgt tatcgctgcc agaaatgtgg ttttaccgca tacaccctct
     7981 actggcattg tccgtcttgt cgggcctggt caaccattaa accgattcgc ggtcttgatg
     8041 gcctgtaatt tttaaaaaaa tccgacttta gttacaacat gctagttatt gatgttccat
     8101 tgtgctccgg caacgacgga gcagaaaaag cctgccaggg gaaaaatcgc aactgttaat
     8161 tttttatttc cacgggtaga atgctcgccg tttacctgtt tcgcgccact tccggtgccc
     8221 atcatcaaga aggtctggtc atgacgttaa ctgcttcatc ttcttcccgc gctgttacga
     8281 attctcctgt ggttgttgcc cttgattatc ataatcgtga tgacgcgctg tcctttgtcg
     8341 acaagatcga cccacgcgat tgtcgtctga aggtcggcaa agagatgttt acattgtttg
     8401 ggccacagtt tgtgcgcgaa cttcaacagc gtggttttga tatctttctt gacctgaaat
     8461 tccacgatat tcctaacact gcagcgcacg ctgtcgctgc tgcagctgac ttaggcgtgt
     8521 ggatggtgaa tgttcatgcc tctggtgggg cgcgtatgat gaccgcagcg cgtgaggcac
     8581 tggttccgtt tggcaaagat gcaccgcttt tgattgctgt aacagtgttg accagcatgg
     8641 aagctagcga cctggccgat cttggcgtga cactgtcacc tgcagattat gcagaacgtc
     8701 tggcggcact gacgcaaaaa tgtggccttg atggtgtggt gtgttctgct caggaagctg
     8761 tgcgctttaa acaggtattc ggtcaggagt tcaaactggt tacaccgggc attcgtccgc
     8821 aggggagtga tgctggtgac cagcgccgca ttatgacgcc agaacaggcg ttggcggctg
     8881 gtgttgatta tatggtgatt ggtcgcccgg taacgcaatc ggtagatcca gcgcaaacac
     8941 tgaaagcgat caacgcctct ttacagcgga gtgcatgatg agtgattcca acagccgtct
     9001 ggtctactca acggaaaccg gacgtattga tgagccaaaa gcggccccag tacgccctaa
     9061 aggcgatggt gtggtgcgta ttcagcgtca gaccagtgga cgtaaaggta agggcgtttg
     9121 cctgattacc ggtatcgatc tcgatgatgc cgaactgaca aaacttgcag cggaactgaa
     9181 gaaaaaatgc ggctgcggcg gagcagttaa agatggagtt attgaaatcc agggcgataa
     9241 gcgtgattta ttaaaatcac tacttgaagc gaaagggatg aaggtaaaac tcgcaggcgg
     9301 ttaacataaa aagccacgga tatatccgtg gctttcgaat attttactgt gtgtattatt
     9361 cagttatttc gtactgaaca aaatcaagcg tattataatt gcgagtcgat aatcgacatt
     9421 tatttacgat tatttaccga cctggtgacc aataacacca ccgacagctg caccacctaa
     9481 tgtacccaac gtactgccat cggtcagtac tgcaccgcct aatgcccctg cacccgcgcc
     9541 gattgcggtg ttgcggtccc gtttagacca gttagaacag gcactcagag acattgccaa
     9601 agtaattgcc agaacagccg cggtcatttt tttgctcgtt acaaacataa tactctctcc
     9661 tgaatttatg attcacggaa gtaagctctc tataactata atagctaaga ataagcctgg
     9721 tgaaattatt ccgtgaaatc tgctcgcgcg cagggttata tcacgcaggt gataatgact
     9781 tcctgttata tcgctgataa taattttata tcttaagcgt gttaataaca ggtaaatagt
     9841 cttaattatc aaccaggaat catcttagag cggatgattt gccaaactgc aaatcatccg
     9901 tagagaaggg aaatggttaa atgtcaacga cgtgaacggt gagtttactg tgctcaagat
     9961 gcatcagatc gctggcgcgt attttcgaat cggtaatcac gcgattgaat cgctcaacgg
    10021 gaccgatgga gtatgaatgt acagcaccaa atttcgagct gtcagtcagg actatcactt
    10081 cgcactcttt ttccagcacg gcattgacca catcggtacg catcatatcg cgaccggtga
    10141 atccagtttc aggttgccag ccatcaatac caataaatgc tttgctgaaa tgcacctgct
    10201 ggatgcactg gcgtgtcaac gggccaacca tactttcgct ttttttctgg tacacgccac
    10261 cgagcaaaat gacttcacaa ggcgcgtctt tcagcaaatg cgcgatgtag ctgctgaccg
    10321 tgatgatagt gacatttttc ttctgctccc ccagagtccg ggcgagcagg gcattgctgc
    10381 tgccattttc gataaagatg gtttcgcccg gttgaaccag tgacgcggca aactcggcga
    10441 gttcacgctt cagcgtatag ttgctcatca tacgggtttc gacgtcatca ctatcaagcg
    10501 aaactgcaaa gccatgtgca cggcggaggt aactcagttt ttcgagggtg ttgagatcct
    10561 ggcgaatggt aacttcagaa actccagtgg cttttgccag atcggttacg ctaacctgac
    10621 cctggtcaat gaccatctgt agaatagttt gttgtcggga attcatcgct gtaattctta
    10681 taacgttata atactaaata aaaaaatact gacgcgccgg gcatcctcaa ataggaaaac
    10741 ctgaaggcac gattgttaaa tctcccacgg tgccttcggg atgtctggcg tagattcagc
    10801 aacctggcgc aagagttctg ctttaagtat ctcgagatta tggatcgcag agtggtaatc
    10861 gcctgccaca aggatatcta acacaatatc aatacgttcg gcaacgcgct gggcatcaaa
    10921 ttcagacatc aaggacatcc ttatagcaaa agtggaaaat gaataatgca aaaattgccg
    10981 ctaaaagaga agtgtttaac agcaacggct aattatcatc caggaatacg atatataatg
    11041 acgggatata gcgctaagta tatatattca tctacttatg cgcgcttcag atagcgttta
    11101 taccagcgtt cgaaggcgac ggcgggcatc ggtttggcaa acaaaaatcc ttgccgctca
    11161 ttgatcccgt tcttggttaa aaaagcatct tcctttgcac tctctacacc ttcggcgatc
    11221 acctgaagat tcaatgcctg ggccacagcg acgatcgccc ggaccagtga ctgcgagaca
    11281 ggttgtttgt gaatatctcg aacaaaaacc tggtcaagtt tgatggcatc gatcggaaag
    11341 cgcgccagtt gcgaaagtga agagtagccg gtaccaaaat catccagatg cacttgcgca
    11401 cctagttggc taaattgttg aataacagac agtgccagtt catcattctc aatcagacaa
    11461 ctctctgtca gttcaacatc tatagggcag tattcaaaat tgagttcctg gagaacctgt
    11521 ttcagggcgg tgaaaatggt ttgatcggcg agctgacgtg cagaaatatt taccgccact
    11581 cgcaggttta tgcctttatc ccgccacttt gccacctggc gtacgacatc gagaatcacc
    11641 caacggccta aaggcacaat tagccctgac tcttcggcgt aggaaatgaa gtccaacggt
    11701 ggaatcaacc cacgttcagg tgactgccaa cgtactagtg cttccagact gcgcacttcg
    11761 ccacgccagg tgattttcgg ttgatagtga ataaccaact gatcgttttc cagtgcttta
    11821 cgcaagttgg tatccagcca gagatattca aatacccgtt gattcatttc tggggtaaaa
    11881 acgcaaaatt gtcctcgtcc gccttccttc gctgtgtaca ttgctgtgtc ggcgtgacga
    11941 ataatagccg tgctgtctga accatgttcg ggagagagtg caatacctac tgaacagctg
    12001 gtataaactt caattaaacc aatgcgaaag gggagccgta agcgggtcaa aattcgtgat
    12061 gccattgctt ccagcgcgct ttgtgaggtg ttggatgcca gtaccagaaa ctcatcccca
    12121 cctggacgcg ccaacacctg gtcatgttcg agacagctta aaatagccaa tgacacgtcg
    12181 cgtaataact ggtcaccaaa caaatgccca taggcgtcgt tgaccttttt gaaattatcc
    12241 aaatcaagat acacaacccc aactttattg ttatctgcat gattaatagc gtgatcgatt
    12301 aaatcctgca ttgcgttacg attcggcagt ccggtgatac tgtcggtatt tgccagaata
    12361 cgcagtcgct cctgagcgcg gcgctcttcg gtaatgtcgg tgccggaaca gattaaaaaa
    12421 atctcgcttt tgccactgcc gctgtggaca aatttattgc gaaacagaaa cagccgctgg
    12481 cctttacatg ttggtatcca cagttcgact tcatatgcat tgccgcttcg aaaaaataca
    12541 cggttattgc gcctggatgc cgcagcttca cgacggctca taaacagttt aaacacgctt
    12601 tggccaatga cgtcgtgttc tttcaaccca gtgtaatctt cacataaccg attgaagcgt
    12661 tggatattcc cccggctgtc gagaatcact attgcggaat gtgcttcaga aactacctgc
    12721 tcagcaaagg aaagcccgtg tgataaatca cgagcaactg ccggtgtgtc atgccatgca
    12781 gacgcgttgc cagcccattc ccgtttattg atttttcgtc ctaccagatg cacagaaaga
    12841 tcgctctcat cgacggtcag actcatcatc aggctggagg tgatgaccgt catttccctg
    12901 atgcgagcag cctgttcggc agataactgc aaagtacgat caggttctgt ggtttcggtg
    12961 gtagaaaagc gcaaaacatc gctgctttcc gtcaaccgcc agtatggatt gtgcgatccg
    13021 agaaagttgt acaacgttgt ggactcccta acggttttca tgatgcatat cctccggtta
    13081 aataaaagga acaacat
//
LOCUS       DADMIB010000119        12952 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.119, whole genome shotgun sequence.
ACCESSION   DADMIB010000119 DADMIB010000000
VERSION     DADMIB010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12952
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.119"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(234..1574)
                     /gene="fadL"
                     /locus_tag="JNZ89_003100"
     CDS             complement(234..1574)
                     /gene="fadL"
                     /locus_tag="JNZ89_003100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708225.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid transporter FadL"
                     /protein_id="HAY8936891.1"
                     /translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG
                     EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA
                     WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
                     LNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDS
                     NTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG
                     LPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATST
                     SGNTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRF
                     WLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
     gene            1946..2230
                     /locus_tag="JNZ89_003101"
     CDS             1946..2230
                     /locus_tag="JNZ89_003101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 family protein"
                     /protein_id="HAY8936892.1"
                     /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTL
                     AALTEKARSVESEPCKISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR"
     gene            2410..3720
                     /gene="fadI"
                     /locus_tag="JNZ89_003102"
     CDS             2410..3720
                     /gene="fadI"
                     /locus_tag="JNZ89_003102"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HAY8936893.1"
                     /translation="MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMV
                     VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
                     FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
                     SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS
                     DGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT
                     DGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTM
                     SDLTLIDMHEAFAAQTLANIQLLGSERFACEVLGRAHATGEVDDSKFNVLGGSIAYGH
                     PFAATGAWMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
     gene            3720..5864
                     /gene="fadJ"
                     /locus_tag="JNZ89_003103"
     CDS             3720..5864
                     /gene="fadJ"
                     /locus_tag="JNZ89_003103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HAY8936894.1"
                     /translation="MEMASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIK
                     QLRENKELRGVVFISAKPDNFIAGADINMIGNCKTVQEAEALARQGQQLMAEIHALPI
                     PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG
                     VSTTLEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERI
                     LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL
                     AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLP
                     VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI
                     IEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP
                     VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR
                     MLTKGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
                     SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVAERCVM
                     LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA
                     TQYGSRFTPCERLVEMGARGESFWKTTATDLQ"
     gene            6067..6552
                     /gene="sixA"
                     /locus_tag="JNZ89_003104"
     CDS             6067..6552
                     /gene="sixA"
                     /locus_tag="JNZ89_003104"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HAY8936895.1"
                     /translation="MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVE
                     IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS
                     VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA
                     I"
     gene            7227..7487
                     /locus_tag="JNZ89_003105"
     CDS             7227..7487
                     /locus_tag="JNZ89_003105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY8936896.1"
                     /translation="MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCS
                     IVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQDCVFDT"
     gene            7494..7790
                     /locus_tag="JNZ89_003106"
     CDS             7494..7790
                     /locus_tag="JNZ89_003106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8936897.1"
                     /translation="MTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSY
                     KSGMGIDQKIVKDTSTNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL"
     gene            7872..10514
                     /gene="yfcU"
                     /locus_tag="JNZ89_003107"
     CDS             7872..10514
                     /gene="yfcU"
                     /locus_tag="JNZ89_003107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher protein YfcU"
                     /protein_id="HAY8936898.1"
                     /translation="MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKG
                     DTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELV
                     AQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWD
                     PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNY
                     QHTRSNDDDEFSGDETQKKWEWSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGG
                     SVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSV
                     SGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQIRYKIMMGRPQEWGHHVEGEFFSGA
                     EASWGIANGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGK
                     GSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSGMVRTGNDKEM
                     YTATYNQNFRDAGVSVYLNYTRHTYWDREEQINYNIMLSHYFNMGSIRNVSISMTGYR
                     YEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGT
                     SDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMG
                     GTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNRLPENAEAT
                     QSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDD
                     GNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPITSPAV
                     KPAIQEQTQRVTPTEPPTSISVNQ"
     gene            10534..11286
                     /locus_tag="JNZ89_003108"
     CDS             10534..11286
                     /locus_tag="JNZ89_003108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000482750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HAY8936899.1"
                     /translation="MFNLTNTAKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDK
                     SISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQVKVQGLPDI
                     NKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKV
                     TLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPV
                     LTYINDYGARMPLYFKCTGNSCQVDEEQSRKG"
     gene            11302..11811
                     /locus_tag="JNZ89_003109"
     CDS             11302..11811
                     /locus_tag="JNZ89_003109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001733155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8936900.1"
                     /translation="MSHKFVAGAGLLVLAGWGISGLAVAGSDIKQVDLTLRILVDGPP
                     PCSVKGSAVKFGNVIINRIDGTNYQQDAKYTLNCGNKVSDDLRMQLKGNTAVINGETV
                     LSTDIAGLGVRIENAADNSLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNA
                     TMTMVVDYQ"
     gene            11808..12296
                     /locus_tag="JNZ89_003110"
     CDS             11808..12296
                     /locus_tag="JNZ89_003110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8936901.1"
                     /translation="MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIE
                     VQFRDLIIDSIDGNYGRQKVDYELSCDSDVRDPEWNMTLSWTGTATSYNDSAIETDVP
                     GFGIELQHDGQRFKLNEPLSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVD
                     YQ"
     gene            12293..12832
                     /locus_tag="JNZ89_003111"
                     /pseudo
     CDS             12293..12832
                     /locus_tag="JNZ89_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416836.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
BASE COUNT         3258 a         3089 c         3441 g         3164 t
ORIGIN      
        1 gtatcctgga aatgcagaaa agtaaactct ttgagaagga cgagcagaac gcctgaaaat
       61 atgcctttcc cttcaggttt gtctgtggat accgcttatt gatttgaaag ggcaagctgc
      121 caacaggctg tttgcaaaac tcaggaggta agcaatgagg acactacttt cggtgaagtg
      181 ggggagttaa agtcacctgc tatgcaggtg actttatcca ggcgaacgcg ttatcagaac
      241 gcgtagttaa agttcgtacc gaacagccag gctttacctt cagactcgaa ctggtatggg
      301 ccttcgttaa ttttcacgct ctgaccgtgc atataagaaa caccaacgtc gactgaagca
      361 tctttattaa atgcgtaagt cgtacctgca ctcagccaga aacggtcctg gtccggaatg
      421 gagatagaac gattctgagc cggaactggg ctgtcatcaa aggcgatacc ggtacggaag
      481 gtccagttat catcgtagta ataagtggta cccaacgcga tgcggtaagc atctttaaag
      541 ccttcatgtt tctggaacag cgtgttgcca ctggttgagg tcgctttcag ctgctggaac
      601 tgactccagc tggtgtaagc caggctatag tgaatcgccc actgtggatc aacacggtta
      661 taacctgaca cttcccacat ttcaggcagg ttcagcgtca gataacccga ttgcgttgcg
      721 ccacctgtcg cggtaggaat tggcaaaccg tagttattaa acgcacgatt aagatcgctg
      781 ctgtagttac ctttgaagtc aattttcact tcagaacggt aggtcagtgc atagcggtta
      841 tttttatcca gttcatacag gattccggcg ttccagccaa agccccactg gttaccgttc
      901 agatgagcga ttttggtatt actgtcgata ccgttggcgg tagctgccaa tgcttgccct
      961 tgaggagttt gcccggcagg agattgcata atctgaccag caaccaactg ccccagatcg
     1021 cctgcgaaac gttcaatttt cgcgcgagcg tagacggcgt tgaaaccaag accaaagctc
     1081 catgcattat ttaagcgata cgcaccgctt aagttcaggt tcatggtttc aaggtcagtt
     1141 gtacccccga cagagccgcc tgcataagta tcattaaact ctgttgccag accatagtta
     1201 gaggtaatag aagcgcccca accaaattgg tcgttaatcg gtgcaacaaa gtgcatgttc
     1261 ggaacccatg ccgtaggcgc gatgttatcg gctttcaggc tacgaccaga cggagacgtt
     1321 ccgctgatat tcacatccgg gtcaatataa accgcacccg cagaaaatgt cgggcggtca
     1381 aacatggtaa tcaatgcggg gttacggcta acgttacctg catcatcggc aattgcgcct
     1441 tcccctgaat aagcccggcc caggccagag gaagaaaatt cgtttaactg aaagcctgcc
     1501 gaccaggcct gggtggagat aagtgccact gcgactgcga gagcagactt tgtaaacagg
     1561 gttttctggc tcatgaccat aacctcaatg atttattttt atacaaacta tgttacgtgc
     1621 tgtaacagga gcgcgaagtg tagggtctga ggtacatctt agaaatcaga ccagtggcga
     1681 gagtataggt cggaccagct ggaatgttgc aagtatgttt ccatcttttt tcaaatatga
     1741 tctaagaaac gcgatccagc tggcaaaatt tggaggttgc gcactcgcgg attcgggtga
     1801 attttgtttt agatcatttt taagtgtgat ttcggtcact tatccgattt tgcagaatta
     1861 acaactggag cagcactttc cggaagcgta aaatatccac aacgtttatc tggcaccttg
     1921 ggtgcacata cagaggaaat caacgatgag taaatgtagt gctgatgaaa ccccggtttg
     1981 ctgctgtatg gatgttggca ccattatgga caactccgac tgcaccgcgt cttacagccg
     2041 cgtgtttgca aaccgcgcag aagcagaaca aacgctggcg gcgttgactg aaaaagcccg
     2101 tagcgtggaa tccgaaccgt gcaaaatctc cccgactttc actgaagagt ctgacggtgt
     2161 gcgcctggat atcgatttca cttttgcctg cgaagctgaa atgctgatct tccagctggg
     2221 tctgcgttaa ttcctctcgg gtacgttcgc ccctgtcagt tgctggcagg ggcgttttct
     2281 tttctttctc ctgtcttcac tgtgtcatag ctcccacttt cctttttctc cgcttggcta
     2341 aatgtaaaaa aatggttaag actatgatca ggtcagacca ctttatttat ttttttacag
     2401 gggagtgtta tgggtcaggt tttaccgctg gttacccgcc agggcgatcg tatcgccatt
     2461 gttagcggtt tacgtacgcc ttttgcccgc caggcgacgg cttttcatgg cattcccgcg
     2521 gttgatttag ggaagatggt ggtaggcgaa ctgctggcac gcagcgagat ccccgctgaa
     2581 gtgattgaac agctggtctt tggtcaggtc gtacaaatgc ctgaagcccc caacattgcg
     2641 cgtgaaattg ttctcggtac cggaatgaat gtgcataccg atgcttacag cgtcagccgc
     2701 gcttgcgcta ccagtttcca ggcggttgca aacgtcgcag aaagcctgat ggcgggaact
     2761 atccgagcgg ggattgccgg tggggcagat tcctcttccg tattgccaat tggcgtcagt
     2821 aaaaaactgg cgcgcgtgct ggttgatgtc aacaaagctc gaaccatgag ccagcgcctg
     2881 aaactcttct ctcgcctgcg tttgcgcgat ttaatgcccg taccgcctgc agtagcagaa
     2941 tattctaccg gcttgcggat gggtgacacc gcagagcaaa tggcgaaaac ctacggcatc
     3001 acccgagaac agcaagatgc attagcgcac cgttcgcatc agcgtgccgc tcaggcatgg
     3061 tcagacggaa aactcaaaga agaggtgatg actgccttta tccctcctta taaacaaccg
     3121 cttgtcgaag acaacaatat tcgcggtaat tcctcgcttg ccgattacgc aaagctgcgc
     3181 ccggcgtttg atcgcaaaca cggaacggta acggcggcaa acagtacgcc gctgaccgat
     3241 ggcgcggcag cggtgatcct gatgactgaa tcccgggcga aagaattagg gctggtgccg
     3301 ctggggtatc tgcgcagcta cgcatttact gcgattgatg tctggcagga catgttgttc
     3361 ggtccggcct ggtcaacacc gctggcgctg gaacgtgccg gtttgacaat gagcgatctg
     3421 acattgatcg atatgcacga agcctttgca gctcagacac tggcgaatat tcagttgctg
     3481 ggtagtgaac gttttgcttg tgaagtactg gggcgtgcac atgccactgg cgaagtggac
     3541 gatagcaaat ttaacgtgct tggcggttcg attgcttacg ggcatccctt cgcggcgacc
     3601 ggcgcgtgga tgattaccca gacattgcat gaacttcgcc gtcgcggcgg tggatttggt
     3661 ttagttaccg cctgtgctgc cggtgggctt ggcgcggcaa tggttctgga ggcggaataa
     3721 tggaaatggc atcagcgttt actcttaatg ttcgtctgga caacattgct atcatcacca
     3781 tcgacgtacc ggatgagaaa atgaataccc tgaaggcgga atttgcctcg caggtgcgcg
     3841 ccattattaa gcaactccgt gaaaacaaag agttgcgcgg cgtggtgttt atctccgcga
     3901 aaccggacaa ttttatcgcc ggagcagaca tcaacatgat cggcaactgc aaaacggtgc
     3961 aagaagcgga agctctggcg cggcagggcc aacagttgat ggcggagatt catgctttgc
     4021 ccattccggt tatcgcggct attcatggcg cttgcctggg tggtgggctg gagttggcgc
     4081 tggcgtgcca cggtcgcgtt tgtactgacg atcctaaaac ggtgctcggt ttgcctgaag
     4141 tacaacttgg attgttaccc ggttcaggcg gcacccagcg tttaccgcgt ctgataggcg
     4201 tcagcacaac attagagatg atcctcaccg gaaaacaact tcgggcgaaa caggcattaa
     4261 agctggggct ggtggatgac gttgttccgc actccatttt gctggaagtc gctgttgagc
     4321 tggcgaagaa ggatcgccca tcttcccgcc ctctacctgt acgcgagcgt attctggcgg
     4381 ggccgttagg tcgtgcgctg ctgttcaaaa tggtcggcaa gaaaacagaa cacaaaactc
     4441 aaggcaatta tccggcgaca gaacgcatcc tggaggttgt tgaaacggga ttagcgcagg
     4501 gcaccagcag cggttatgac gccgaagctc gggcgtttgg cgaactggcg atgacgccac
     4561 aatcgcaggc gctgcgtagt atcttttttg ccagtacgga cgtgaagaaa gatcccggta
     4621 gtgatgcacc gcctgcgcca ttaaacagcg tgggaatttt aggtggtggc ttgatgggcg
     4681 gcggtattgc ttatgtcact gcttgtaaag cggggcttcc ggtcagaatt aaagatatca
     4741 acccgcaggg cataaatcat gcgctgaagt acagttggga tcagctggag ggcaaagttc
     4801 gccgtcgtca tctcaaagcc agcgaacgtg acaaacagct ggcattaatc tccggaacga
     4861 cggactatcg cggctttgcc catcgcgatc tgattattga agcggtgttt gaaaatctcg
     4921 aattgaaaca acagatggtg gcggaagttg agcaaaattg cgccgctcat accatctttg
     4981 cttcgaatac gtcatcttta ccgattggtg atatcgccgc tcacgccacg cgacctgagc
     5041 aagttatcgg cctgcatttc ttcagtccgg tggaaaaaat gccgctggtg gagattattc
     5101 ctcatgcggg tacatcagcg caaaccatcg ccactacggt aaaactggcg aaaaaacagg
     5161 gcaaaacgcc cattgtcgtg cgtgacaaag ccgggtttta cgtcaatcgc atcttagcgc
     5221 cttacattaa tgaagctatc cgcatgctga ccaaaggtga acgggtagag cacattgatg
     5281 ccgcgctagt gaaatttggt tttccggtag gtccaatcca acttttggat gaggtaggaa
     5341 tcgacaccgg gactaaaatt attcctgtac tggaagccgc ttatggagaa cgttttagcg
     5401 cgcctgcaaa tgttgtttct tcaattttga acgacgatcg caaaggcaga aaaaatggtc
     5461 ggggtttcta tctttatggt cagaaagggc gtaaaagcaa aaaacaggtc gatcccgcca
     5521 tttacccgct cattggcgca caagggcagg ggcgactctc cgcaccgcag gttgctgaac
     5581 ggtgtgtgat gttgatgctg aatgaagcag tacgttgtgt tgatgagcag gttatccgta
     5641 gcgtgcgtga cggggatatt ggtgcggtat ttggcattgg ttttccgcca tttctcggtg
     5701 gaccgttccg ctatatcgat tctctcggcg cgggcgaagt ggttgcaata atgcaacgac
     5761 tggccacgca gtatggttcc cgttttaccc cttgcgagcg tttggtcgag atgggcgcgc
     5821 gtggggaaag tttttggaaa acaactgcaa ctgacctgca ataagaaggt caaagctata
     5881 tgaatccgcg ctgaatggcg gagtgttggt caaaatgtaa acgcatattg actatactta
     5941 cgccattgag gtaaaaaaca gcgtttcatt cggtgaatgg ataaggcaca atgccggcca
     6001 ccgttttctt tctctggttt cagatgaaag aaaatgggcg aatctggtta acaaaagcgg
     6061 tgcaatatgc aagtttttat catgcgtcac ggcgacgcag ccctcgatgc cgccagtgat
     6121 tcggttcgtc ctctgaccac taatggttgt gacgaatctc gcctgatggc gaactggctg
     6181 aaaggtcaaa aagtggaaat cgaacgcgtt ctggtgagcc cgttcctgcg agccgagcaa
     6241 acactggaag aagtagggga ttgtctgaac ctgccttcca gtgcagaagt tctgccggag
     6301 ttaacgccct gcggcgatgt tggtctggtc agtgcctatt tgcaggcgtt gaccaatgaa
     6361 ggtgttgctt cggtactggt gatctctcac ttaccgttag tcgggtatct ggttgccgag
     6421 ttatgtccgg gcgaaacgcc gcctatgttt accacctcgg ccattgccag cgtaacgctt
     6481 gatgaaagcg gaaacggtac attcaactgg cagatgagcc cgtgtaatct gaagatggca
     6541 aaagctatct gatgtgttcc aaattatgcc caatgaggta gattcattgg gcataattgc
     6601 tcatcaggca gcggatatct gtcaacctca ctactatcga agactctcct tatctataaa
     6661 taaaacactt tctacattca ttcggaaatt attcttctgc acgtatcttg attttgccca
     6721 aagttacatg ttgaaatgaa taatgtctgt ttgacactca ttgtcattta ttaatacaga
     6781 taatagagtt gaataatcag gcaggatgta attgaaactt gattaaattc tggctatagt
     6841 gtttatatat tatattgtca aaagtggata aatgccaatc gcattatata ttcattgttt
     6901 gttttttaag ctgttgatat tcattattga tatactttct attttttcta aatacttatt
     6961 ccgtattttt taaggatgtc cttaagataa tctttcttct gtcaatatat taattaaatc
     7021 tacatttact ctttagtaaa attaaattgc atcaggggtg tggaaacatc actatgcggc
     7081 cccacaccaa cgaatacaat tttctacgac ctgttctttt tggatcgcat gccgtattca
     7141 atggctgggt ataaacattg gctattgact gaatcaatgt attgcaatgt ttatattttt
     7201 aattatttat agtttaagga caaataatga gtaagtttgt taaaacagct attgctgcgg
     7261 caatggtgat gggcgtgttc acctctacgg caacaatcgc tgcgggtaac aacggtactg
     7321 cacgttttta cggcaccatt gaagactcag tgtgttctat cgttccggac gatcacaaac
     7381 tggaagttga tatgggtgat atcggtgccg aaaaactgaa aaataacggc accaccacgc
     7441 cgaaaagttt ccagattcgt ctgcaagatt gcgtatttga tacttaggaa acaatgacca
     7501 ctacctttac tggtaccgtt tcttctgcaa atagcggcaa ttattacacc attttcaata
     7561 ccgataccgg tgcggcattt aacaatgtta gcctggcgat cggtgactct ctgggtacct
     7621 cttacaaaag cggcatgggt attgaccaga aaatagtgaa agacacttct actaataaag
     7681 gcaaagcgaa gcagacactg aactttaaag cctggctggt cggcgcagct gatgcgccag
     7741 atctgggtaa tttcgaagca aataccacct tccagattac ttacctgtaa ggcatacccc
     7801 catagcgaca ctgctatggg ggatttaaat ggattttgac cgaacaagaa taaaaacgga
     7861 tagaaacgtg tatgcctgac cattctcttt ttcgattacg gattcttccg tggtgcattg
     7921 cgctggcaat gtcagggagt tatagcagtg tctgggctga agacgacatt cagtttgatt
     7981 cccgttttct ggaattaaaa ggcgacacaa aaattgatct gaagcgtttt tccagccagg
     8041 gatatgttga gcccggaaaa tacaatttac aggttcaact aaataaacag ccattggcgg
     8101 aagagtacga tatttactgg tatgctggtg aagatgacgc gagcaaaagc tatgcttgtc
     8161 tgacaccgga actggtagcg cagtttggtt taaaagaaga cgtggcgaaa aatctgcaat
     8221 ggagccacga tgctaaatgc ctgaaatccg gtcaactgga aggcatggaa attaaggctg
     8281 atttaagcca gtccgcatta gtcatttcac tgccacaggc ttacctcgaa tatacttatc
     8341 ccgactggga tccgccttca cgttgggatg acggcatctc cgggatcgtc gcggactaca
     8401 gcatcaacgc acaaacccgg cacgaagaaa atggcggtga tgatagtaac gagatcagcg
     8461 gcaacgggac ggtcggggtt aacctggggc cgtggcgtat gcgtgctgac tggcagacta
     8521 actatcaaca tactcgcagt aatgatgacg atgaattcag cggcgatgaa actcaaaaaa
     8581 aatgggagtg gagtcgctac tatgcctggc gggcgttacc atcattaaaa gccaaactgg
     8641 cgctgggcga ggattacctc agatccgata tttttgatgg ttttaactat gttggtggta
     8701 gtgtcagtac tgacgatcaa atgttgcctc ccaatctgcg cggctacgcg ccagacattt
     8761 ccggcgtggc acacaccaca gcaaaagtga ccgtcagcca gatggggcgt gtgatttacg
     8821 aaacgcaggt tccggctgga ccgtttcgta ttcaggatct tggtgattct gtctccggta
     8881 cgttgcatat tcgcattgaa gaacagaacg gccaggtgca ggaatatgac atcagcaccg
     8941 cctcgatgcc atacctcact cgtccaggtc agattcgcta taagatcatg atgggccgtc
     9001 cgcaagagtg gggacaccat gtcgagggtg aatttttttc tggtgctgaa gcttcctggg
     9061 ggatcgctaa cggctggtcg ttatatggcg gcgcactggg agatgaaaac tatcagtctg
     9121 cggcgcttgg cgtcggtcgc gatttgtcta cattcggcgc ggtcgcgttt gatgttactc
     9181 actcgcacac caaactggat aaagacaccg cttatggcaa aggttcgctg gacggtaact
     9241 ccttccgtgt gagttattcc aaagactttg accagctcaa cagccgcgtt acttttgctg
     9301 gatatcgctt ctcggaagag aactttatga ccatgagcga gtatctggat gccagtgaca
     9361 gcggaatggt acgcacgggc aacgacaaag agatgtacac cgccacttat aaccagaact
     9421 tccgcgatgc gggtgtttcg gtttatctca actatacccg ccatacctac tgggatcgcg
     9481 aggagcagat aaactacaac atcatgctct cgcactattt caatatgggc agtattcgta
     9541 atgtcagcat ctcgatgact ggctaccgtt acgagtatga caaccaggcc gacaaaggca
     9601 tgtacatttc gctcagtatg ccgtggggcg acaacagtac cgttagctat aacggtaact
     9661 atggcagtgg gacggacagc agtcaggtcg gttatttcag ccgtgtcgat gacgcgactc
     9721 actatcagtt gaacgtcggc accagtgaca aacacaccag cgttgacggc tattacagcc
     9781 atgatggttc gctggcgcag gttgacctca gtgcgaacta ccatgaaggg caatacacct
     9841 ctgcgggctt gtcgttacag ggcggcgcaa cgcttactgc ccacggtggc gcacttcacc
     9901 gtacccagaa tatgggcggg acacgcttgt tgattgatgc cgatggcgtt gccgatgttc
     9961 cggtggaagg taacggggct gctgtttata ccaatatgtt tggtaaagcc gtcgtttctg
    10021 acgtcaataa ctattaccgc aatcaggcgt atatcgacct caacagattg cctgaaaacg
    10081 ctgaagcaac ccagtcggtg gtgcaagcca cgctaactga aggtgccatt ggctaccgta
    10141 aatttgctgt cattagcgga caaaaagcga tggcggtgct gcgcctgagc gacggcagcc
    10201 atcctccgtt tggcgcagaa gtaaaaaatg ataacgagca gacagtgggc cttgtcgatg
    10261 atgacggcaa tgtttatctg gctggggtga aacctggcga acacatgagt gtgttctgga
    10321 gtggtgttgc gcattgcgat atcaacctgc cggacccgct gcctgccgat ctgtttaacg
    10381 gcttgttact gccatgccag cataaaggca atgtagcacc tatcacttcg ccggcggtca
    10441 aaccggcgat tcaggaacag acacagcggg tgacgccaac ggaacctccg acttcaattt
    10501 cagtaaacca gtaacgtgat taaggaatga tccatgttta atctgactaa cactgcaaaa
    10561 atcgttgtcc cggcactggc gctgctggcg acagcggtca gtttctccag ccacgcttcg
    10621 gtgacgcccg acaggacacg gctggtgttt aacgaaagcg acaagtccat cagcgtcacg
    10681 ctgcgcaaca acgatcccac actgccttat ctggcgcaga gctggataga ggatgcaaag
    10741 ggcaacaaaa tcagctctcc gcttgcggtg cttccgccag tgcagcgcat cgatgcgatg
    10801 atgaacggcc aggtgaaggt gcaggggctg ccggatatca acaaactgcc ggccgaccgc
    10861 gagagcgtgt tctatttcaa cgtgcgcgaa attccgccga aatcaaataa accgaacaca
    10921 ctgcagattg cgctgcagac gcgtatcaaa ctgttctggc gaccgaaggc gctggagaac
    10981 accagcatga aaagtccgtg gcagcataag gtgacgctca tccgtaacgg ccaggacttc
    11041 accgtcaata acccgacgcc gtactacgtg atcatcagca acgccagcgc taaaaaaggc
    11101 ggcaacccgc cggcgggatt cacaccgctg atgatggagc cgaaaacctc cgcaccgctg
    11161 aatgcgaaga tggacagcgt gccggtgctg acttacatca acgactacgg cgcgcggatg
    11221 ccgctgtact tcaaatgcac cggcaacagc tgccaggtgg atgaagagca gagccgcaaa
    11281 ggctgatgcc gggagggact tatgagtcac aagtttgtag cgggcgcagg gttgctggtg
    11341 ctggccggat ggggcatcag cggtttggct gttgctggca gtgatatcaa acaggtggat
    11401 ctgacgctgc gaatcctagt cgatggaccg ccgccttgct ccgtgaaggg aagcgctgtg
    11461 aaatttggca atgtgataat caacaggatc gatggtacca attaccaaca ggatgcgaaa
    11521 tacaccctca actgcggtaa taaagtcagc gatgacttac ggatgcagct caaaggcaat
    11581 accgccgtga tcaacggaga aacggttctc agcacggata tcgccggcct gggggtgcgg
    11641 atagaaaacg ccgccgacaa ctccctgttt gcagttggtg aaaataactg gacgcctttt
    11701 aatgtcaaca ctcagcctca gctgaaagcg gtgccggtaa aacagagcgg ggtgcaactg
    11761 actccgtcgg agtttaacgc cacgatgacc atggtggtgg attaccaatg aaaaaattcc
    11821 tgctcctttt actgtgcgct ggttgcgggg ctgtgctggc ggcggaagat gacatcacat
    11881 tccacggtac gctgatgtcg ccgcccgcct gtagcatcag cggcgggcaa accatcgaag
    11941 tgcaatttcg cgatctcatt atcgacagca ttgatggcaa ttatggtcgt cagaaagtgg
    12001 actacgaact gagctgcgac tcggatgtcc gcgatcccga gtggaatatg acactctcct
    12061 ggacggggac tgccacctcc tacaacgact ctgctattga gacggatgta ccgggcttcg
    12121 gaattgagct tcagcatgac ggtcagcgtt ttaagctcaa cgagccgctt tccattaacg
    12181 ccaccgattt tagccagaag ccaaagctgg aggcggtacc ggtcaaagcg gctgatgcgg
    12241 tgctgacgga cacgaccttt tctgcttacg caaccttacg ggtggattac caatgaaaac
    12301 agcacacatt tattcacccg gttatgcgct gttagcaggc ctgctgctga ccgccagcac
    12361 aggagcacag gcagtcgaca acaacctgca tttttacggc aacctgctga gtaaatcctg
    12421 cacgctggtg gtggatggtg ccaacctggc agaaatccat tttcccaccg tcagcaaccg
    12481 ggatttgatg gtatctgggc agtccgcgca tctgccggtt gtgtttaagc tgaaagactg
    12541 caaagggccg gcgggataca acgtcaaagt cacgctgagc ggcaccgaag acagcggtca
    12601 gccgggtttt ctggcagtcg atgacacctc caccgcgcag ggcgtgggga tagggatgga
    12661 aacgctcgac ggcaagcggg tggatattaa caacaccacc ggggcgacct ttgcgcttac
    12721 caacggcaac aatgatatta atttccgggc ctggatctag gcgaaaagcg gtcgtgatgt
    12781 aaccatcggt gatttcaccg ccagcctgac agcaactttt gagtatattt aaaatgaaaa
    12841 tccttcgtca tgttttatgt cttttattgc tgttaatgtt caatacatgc ggccaggcgg
    12901 cgacgaaagt tggtgagtta tatgtgccag ctggtgccag ttcacctgcg ac
//
LOCUS       DADMIB010000120        12819 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.120, whole genome shotgun sequence.
ACCESSION   DADMIB010000120 DADMIB010000000
VERSION     DADMIB010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12819
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.120"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            47..520
                     /locus_tag="JNZ89_003112"
                     /pseudo
     CDS             47..520
                     /locus_tag="JNZ89_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233146.1"
                     /note="type IV secretion system coupling protein; similar
                     to F plasmid TraD; incomplete; partial in the middle of a
                     contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraD"
     gene            complement(529..927)
                     /gene="vapC"
                     /locus_tag="JNZ89_003113"
     CDS             complement(529..927)
                     /gene="vapC"
                     /locus_tag="JNZ89_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(fMet)-specific endonuclease VapC"
                     /protein_id="HAY8936902.1"
                     /translation="MLKFMLDTNICIFTIKNKPASVRERFNLNQGRMCISSVTLMELI
                     YGAEKSQMPERNLAVIEGFVSRIDVLDYDAAAATHTGQIRAELARQGRPVGPFDQMIA
                     GHARSRGLIIVTNNTREFERVGGLRTEDWS"
     gene            complement(927..1154)
                     /gene="vapB"
                     /locus_tag="JNZ89_003114"
     CDS             complement(927..1154)
                     /gene="vapB"
                     /locus_tag="JNZ89_003114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin VapB"
                     /protein_id="HAY8936903.1"
                     /translation="METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAG
                     ETWDEWFDGHSVSADFMDNREQPGMQERESF"
     gene            1236..1655
                     /locus_tag="JNZ89_003115"
     CDS             1236..1655
                     /locus_tag="JNZ89_003115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative relaxase"
                     /protein_id="HAY8936904.1"
                     /translation="MMSIAQVRSAGSAGNYYTNKDNYYVLGSMGERWAGQGAEQLGLQ
                     GSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRL
                     IEAHNQAVDFAVRHHPCGGTGLHTDDDGRTVRNGADR"
     gene            1642..6513
                     /gene="traI"
                     /locus_tag="JNZ89_003116"
     CDS             1642..6513
                     /gene="traI"
                     /locus_tag="JNZ89_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005079803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="HAY8936905.1"
                     /translation="MLTGNLVMALFNHDTSRDQEPQLHTHAVVTNVTQHNGEWKTLSS
                     DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFS
                     GRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRD
                     AAEQRAYTRTQTPGPASQDGPDVQQAVTQAIAGLSERKVQFMYTDLLARTVGILPPEN
                     GVIERARAGIDEAISREQLIPLDREKGLFTSGIHMLDELSVRALSRDIMKQNRVTVHP
                     EKSVPRTAGYSYAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA
                     ADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA
                     ARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRYVRYARL
                     AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDS
                     RSRYLRDMYRPGMVMEQWNPETRSHDRYVTERVTAQSHSLTLRNAQGETQVVRISSLD
                     SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT
                     LPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLY
                     SSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAIHLALP
                     VLESKNLAFSMVDLLTEAKSFAAEGTGFADLGGEINAQIKRGDLLYVDVAKGYGTGLL
                     VSRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSGQRAAARMILETSDRFTV
                     VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFL
                     HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA
                     IAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINRDVERALSGLERVKPSQV
                     PRLEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYAAIVRDYTGRTP
                     EAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGQVQVMVPVLNTANIRDGELRRLST
                     WENNPDALALVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI
                     RVGTGDRIRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTRVIRPGQERAEQHID
                     LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW
                     TDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDS
                     PARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDA
                     QFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGD
                     IPDNSVQPGAGNGEPVMAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTE
                     QAVREIAGQERDRAAITEREAALPESVLREPQRVREAVREVARENLLQERLQQMERDM
                     VRDLQKEKTPGGD"
     gene            6533..7279
                     /gene="traX"
                     /locus_tag="JNZ89_003117"
     CDS             6533..7279
                     /gene="traX"
                     /locus_tag="JNZ89_003117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858383.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     acetylase TraX"
                     /protein_id="HAY8936906.1"
                     /translation="MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLM
                     VLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQF
                     AYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAG
                     LLMLAVSNRLYRAEDRAERLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVLC
                     AGKSLPRFWPGDFFPTFYACHLAVLGVLAL"
     gene            7334..7894
                     /locus_tag="JNZ89_003118"
     CDS             7334..7894
                     /locus_tag="JNZ89_003118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="HAY8936907.1"
                     /translation="MTEQKRPVLTLKRKTEGTATVRSRKTIINVTTPPKWKVKKQKLA
                     EKAAREAELAAKKAQARQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRD
                     VLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEA
                     YAGARLAKIRRQNRIKAELQAVLDEK"
     gene            8025..8237
                     /locus_tag="JNZ89_003119"
     CDS             8025..8237
                     /locus_tag="JNZ89_003119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HAY8936908.1"
                     /translation="MNGFRNSSRNGQVWRYQRAGGRAVILEVSGRWMEAAEAWRRAAC
                     VAPRTDWQQFARKRAEHCHRRCRGRG"
     gene            8421..8942
                     /locus_tag="JNZ89_003120"
     CDS             8421..8942
                     /locus_tag="JNZ89_003120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001302180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HAY8936909.1"
                     /translation="MLHYSGGLKYRCHLSDMENNMRKYIPLVLFIFSWPVLSADIHGR
                     VVRVLDGDTIEVMDSLKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQ
                     RDRYGRILGQVYAPDGMNINQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSD
                     ADPVPPWIWRHRK"
     gene            8988..9197
                     /gene="hha"
                     /locus_tag="JNZ89_003121"
     CDS             8988..9197
                     /gene="hha"
                     /locus_tag="JNZ89_003121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HAY8936910.1"
                     /translation="MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLSNSERESFNSAA
                     DHRLAELITGKLYDRIPKEIWKYVR"
     gene            9236..9826
                     /locus_tag="JNZ89_003122"
     CDS             9236..9826
                     /locus_tag="JNZ89_003122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HAY8936911.1"
                     /translation="MKLIIFILIVLIIAALLIRIILRSVNQHSPLLMQLHAAGIRTGD
                     AERILSSGEYWQRQTTLLTEREVSFMKGLFRIVDMTRWYLCPQVRVADIVQLNGNIRP
                     RSRQWWQLFRMVSQWHVDVVIVELRSFSIVAAVELDDASHLRPERRRRDILLEEVLRQ
                     AGIPLLRSHDARKLLQMTGEWLNTTGADQQSPEHRS"
     gene            10066..10326
                     /locus_tag="JNZ89_003123"
     CDS             10066..10326
                     /locus_tag="JNZ89_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="HAY8936912.1"
                     /translation="MSQTENAVTSSLSQKRFVRRGKPMTDSEKQMAAVARKRLTHKEI
                     KVFVKNPLKDLMVEYCEREGITQAQFVEKIIKDELQRLDILK"
     gene            10550..10624
                     /locus_tag="JNZ89_003124"
     CDS             10550..10624
                     /locus_tag="JNZ89_003124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="HAY8936913.1"
                     /translation="MPGKVQDFFLCSLLLRIVSAGWCD"
     gene            10617..11474
                     /gene="repA"
                     /locus_tag="JNZ89_003125"
     CDS             10617..11474
                     /gene="repA"
                     /locus_tag="JNZ89_003125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858393.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HAY8936914.1"
                     /translation="MTDLQQTYYRQVKNPNPVFTPREGARTLPFCGKLMEKAVGFTSR
                     FDFAIHVAHARSLGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECG
                     LATESAAGKLSITRATRALTFLAELGLITYQTEYDPLIGCYIPTDITFTSALFAALDV
                     SEEAVAAARRSRVEWENRQRKKQGLDTLGMDELMAKAWRFVRERFRSYQTELKSRGMK
                     RARARRDADRQRQDIVTLVKRQLTREISEGRFTASREAVKREVERRVKERMILSRNRN
                     YSRLATASP"
     gene            complement(12527..>12819)
                     /locus_tag="JNZ89_003126"
     CDS             complement(12527..>12819)
                     /locus_tag="JNZ89_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000484486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY8936915.1"
                     /translation="RLVFQFPIREQAAAFLGVVPVEKYSGTSVRGCPKLSKIGPPEIR
                     AKLYLASLCGLRFNPLMKAMYERLCLRGKAKMCAIGALMRKLVHWCYGVLKT"
BASE COUNT         3122 a         3226 c         3792 g         2679 t
ORIGIN      
        1 ttaaaatcac catcatacac taaatcagta agttggcagc attaccaaat atcaggaacg
       61 accgaaggtc gctccggagt ttattccgcg tgacatcaac ccggaaatgg agaaccgtct
      121 gagtgccgta cttgccgcaa gggaagcaga aggtcgtcag atggccagcc tcttcgaacc
      181 ggatgtcccg gaggttgttt ccggagaaga cgtgactcag gctgaacagc cgcaacagcc
      241 ggtgtctcct gtcatcaacg ataagaagtc agattcaggt gtgaatgttc cggcaggggg
      301 gatcgagcag gagctgaaaa tgaaaccgga agaagagatg gaacagcaac tgccacccgg
      361 gatcagtgaa tccggtgaag tggtggatat ggccgcttat gaggcatggc agcaggaaaa
      421 tcatccggac acctggcagc agatgcagcg tcgtgaagag gtgaacatca atgtgcaccg
      481 ggaacgcggg gaggatgttg agccgggaga tgatttctga tgaacaggtc agctccagtc
      541 ttcagttctc aggccgccca cacgttcaaa ttcccgggtg ttattagtca caataatcag
      601 cccccgactg cgggcatgac ctgcgatcat ttgatcaaat ggcccgacag ggcgtccctg
      661 acgggcaagt tctgctctta tctggccggt gtgtgtggct gcagcagcgt cgtaatccag
      721 aacatcaatg cgggaaacaa atccctcgat cacagcgaga ttacgttcag gcatctggct
      781 tttttctgca ccatatatca gctccatcag ggtgaccgaa ctgatacaca ttctcccctg
      841 gttcaggtta aaacgctccc tgacgctggc gggtttgttc tttatcgtaa aaatgcagat
      901 gttggtatcg agcataaact tcagcatcag aatgactccc tttcctgcat gccgggctgt
      961 tccctgttat ccataaaatc ggcgctgacg ctgtgtccgt cgaaccattc gtcccatgtc
     1021 tctccggctg gcgtaatgat tctggttcgt ccgacagcaa tcacttcaac gcgttttacg
     1081 ttttccggca atgcaaccgc ttttggcagt ctgaccgctt ggctgcggtt gctgagaaat
     1141 acggtggttt ccattatttg cctccttatg tggatatgtc ttgtgtatat ccattgtggg
     1201 attgataccg ggatatgtca aagggatata cgtttatgat gagtatcgcg caggtcagat
     1261 cggccggaag tgccggtaat tattatacca acaaggataa ttactatgtg ctgggcagca
     1321 tgggagaacg ctgggccggc cagggggctg aacaactggg gctgcagggc agtgtcgata
     1381 aggatgtctt tacccgcctt ctggagggca ggctgccgga cggggcggat ttaagccgca
     1441 tgcaggatgg cagtaacagg catcgtcccg gctacgacct gaccttctcc gctcccaaaa
     1501 gtgtctccat gatggccatg ctcggggggg acaaacgtct tattgaagca cataaccagg
     1561 ccgtggattt tgctgtccgt catcacccgt gtggaggcac tggcctccac acggatgatg
     1621 acggacggac agtcagaaac ggtgctgacc ggtaatctgg tgatggcact gtttaaccac
     1681 gacaccagtc gcgatcagga accacagtta cacacgcatg cggtggtgac taatgttacg
     1741 cagcataacg gcgaatggaa gacactgagc agtgacaaag tggggaaaac ggggttcatt
     1801 gagaatgtgt acgctaatca gattgccttt ggcaggctct accgggaaaa actgaaagag
     1861 caggttgagg cgctgggcta tgaaactgaa gtggtcggta agcacggtat gtgggaaatg
     1921 ccgggtgtac cggtggaggc cttttccgga cgctcacaga ctatccggga ggccgtcggg
     1981 gaagacgcct cgctgaaatc ccgggatgtg gcggcgctgg atacgcgtaa atccaaacag
     2041 cacgtcgatc ctgaagtcag aatggccgag tggatgcaga cgctgaagga aaccgggttc
     2101 gacatccggg catatcgtga cgcagcggaa caacgggcat atacccgcac gcagacaccc
     2161 ggacccgctt cacaggacgg gccggatgtg cagcaggcgg tgacacaggc cattgccgga
     2221 ttaagtgaac gcaaagtgca gtttatgtat acggacctgc tggccaggac ggtcggcata
     2281 ctgccgccgg aaaatggtgt gattgaacgg gcacgcgccg gtatcgatga ggccatcagc
     2341 cgtgagcagc ttatccccct cgatcgtgag aaggggctgt tcacgtccgg gattcatatg
     2401 ctcgatgagc tgtcagtccg ggcactcagt cgtgacatca tgaaacagaa ccgggtgacc
     2461 gtacatccgg agaaaagtgt cccccggacg gccggttaca gctatgccgt cagtgttctg
     2521 gcacaggacc gtccgtcgct ggccattgtg tccgggcagg gcggtgcagc cgggcagcgt
     2581 gagcgggtgg ctgaactggt catgatggcc cgggagcagg ggcgggaggt gcagattatc
     2641 gctgctgacc gtcgctcgca gatgaacctg aagcaggatg aacggctgtc cggtgaactg
     2701 ataaccggac gtcgtcagtt gctggaaggc atggccttca cgccgggcag taccgttatc
     2761 gtcgaccagg gcgaaaaact ctccctgaaa gagacgttaa ccctgctgga tggtgccgca
     2821 cgtcataacg tacaggtcct gataactgac agcgggcagc gaaccggtac aggcagtgca
     2881 ctgatggcca tgaaggatgc cggggtgaac acatatcgct ggcagggggg agaacagcga
     2941 ccggccacca tcatcagtga accggaccgt tatgtccgct atgcccggct ggccggagat
     3001 tttgcggcca gcgtgaaagc cggagaagag agcgtggcac aggtcagcgg agtacgggaa
     3061 caggccatac tgacacaggc cattcgcagt gagctgaaaa cacagggcgt gctcggacac
     3121 ccggaggtaa ccatgaccgc cctgtcaccg gtctggctgg acagccggag ccgttatctg
     3181 cgggatatgt accgcccggg aatggtgatg gagcagtgga acccggagac acgcagtcat
     3241 gaccgctatg tgacagaacg tgtgacggcg cagagtcaca gcctgaccct gcggaatgcg
     3301 cagggcgaaa cgcaggtggt gcgtatttct tccctggaca gcagctggtc gctgttccgg
     3361 ccggaaaaaa tgccggtggc agacggtgag cgtctgaggg tgacagggaa aattcccgga
     3421 ctccgcgtct ccggcggtga ccgcctgcag gtggcatccg tcagtgaaga tgcgatgacg
     3481 gttgttgtgc cgggacgggc tgaaccggcc accctgcctg tgagcgattc accgttcacg
     3541 gcactgaagc tggagaacgg ctgggtggaa acgcccgggc attccgtcag cgacagtgcg
     3601 acggtttttg cctccgtcac acagatggca atggacaatg ccaccctgaa cggtctggcc
     3661 cgcagtggtc gtgatgtccg gctgtattcc tcactggatg aaacccgtac tgcggaaaaa
     3721 cttgcccgcc atccttcctt tacggtggtt tctgagcaga taaaggcgcg tgccggtgag
     3781 acattgctgg aaaccgctat cagtctgcag aaagccgggc ttcacacgcc ggcacagcag
     3841 gccattcatc tggcccttcc tgtgctggaa agtaaaaacc tggccttcag catggtggac
     3901 ctgctgacag aggcgaagtc gtttgctgca gaaggaaccg gttttgctga cctgggaggg
     3961 gaaatcaatg cgcagataaa acggggtgat ttactgtatg tggatgtggc aaaaggctat
     4021 ggcacaggcc tgctggtttc ccgtgcgtcg tatgaggcag aaaagagcat tcttcgccat
     4081 attctcgaag gtaaggaggc ggtcacgccg ctgatggaga gagtacctgg cgaactcatg
     4141 gagaaactga catcaggaca gcgcgccgcc gcccgtatga tactggaaac gtccgaccgt
     4201 ttcacggtgg tgcagggcta tgccggtgtg ggtaagacca cacagttccg ggcggtgatg
     4261 tcagccgtga acatgctgcc ggagagtgaa cgtccccgtg tcgtggggct ggggcccaca
     4321 caccgtgcgg tcggggagat gcgcagcgcc ggcgtggatg cacagacact ggcgtccttt
     4381 ctgcatgaca cgcagctgca gcagcgcagc ggagaaacgc cggatttcag caacacgctg
     4441 ttccttctcg atgagagctc tatggtgggc aataccgaca tggcacgggc atacgccctg
     4501 attgcggccg gtggcggtcg ggctgtggcc agcggtgaca cggaccagct gcaggccatc
     4561 gcgcccggtc agcctttccg tctccagcag acgcgcagtg ctgccgatgt ggtcatcatg
     4621 aaggagattg tgcgtcagac gccggaactg cgggaggcgg tatacagcct gattaaccgg
     4681 gatgtggaaa gggcgctgtc cgggcttgag cgtgtgaaac cgtctcaggt gccacgtctg
     4741 gagggcgcat gggcaccgga gcactccgtg acggagttca gtcacagcca ggaagcgaaa
     4801 ctggcagaag cgcagcagaa ggcgatgctg aaaggcgagg cttttccgga tgtccccatg
     4861 acactgtatg cagccattgt ccgcgactat accggcagga caccggaagc acgggagcag
     4921 acgctgattg tcacgcacct gaatgaggac cggcgcgtac tgaacagcat gattcatgat
     4981 gcacgggaaa aggccggaga actggggcag gtgcaggtca tggtgcctgt cctgaacaca
     5041 gcgaatatac gcgacgggga gctgcgtcgt ctctccacct gggagaataa cccggatgcc
     5101 cttgccctgg tggataatgt gtatcaccgg attgccggta tcagcaagga tgacgggctg
     5161 ataaccctgc aggatgcgga aggtaacacg cggctgattt cgccccggga ggcggtggct
     5221 gaaggcgtca cgctgtacac cccggacacc atccgggtgg ggaccggtga caggatacgc
     5281 ttcacgaaga gtgaccggga gcgcggttat gtggccaaca gcgtctggac ggtgacagcg
     5341 gtttccggtg acagtgtcac actttctgac ggtcagcaga cccgtgtgat tcgccccggt
     5401 caggagcggg cagagcaaca tattgacctg gcctatgcca tcaccgccca cggtgcacag
     5461 ggggcgagtg aaacctttgc catcgcgctt gaaggcacgg aaggtaaccg gaaactgatg
     5521 gccggctttg agtcagccta cgtggccctg tcgcgtatga agcagcatgt gcaggtgtac
     5581 accgataacc gtcagggctg gacggatgcc atcaacaatg ccgtacagaa aggaactgcc
     5641 cacgatgtgt ttgagccgaa accggaccgg gaggtcatga atgcagagcg gctgttcagt
     5701 acggcgcggg agctgcggga cgtggcggca ggccgtgccg ttctccgtca ggcggggctg
     5761 gccgggggag acagtcctgc acggtttatt gctccgggac gtaaatatcc gcaaccgtat
     5821 gtggcactgc cggcgtttga ccgtaacggc aagtccgccg gtatctggct gaacccgctg
     5881 accacggatg acggaaacgg gctgcgggga ttcagcggtg aaggtcgggt aaaaggcagc
     5941 ggggatgcgc agttcgtggc cctgcagggc agccgtaacg gagaaagcct gctggctgat
     6001 aatatgcagg atggcgtccg gattgcccgt gataatcctg acagtggtgt ggtggtaaga
     6061 atcgccggtg aaggccgtcc gtggaatccc ggtgccatca ccggtggccg cgtgtggggg
     6121 gatatcccgg acaacagcgt ccagccggga gccggaaatg gcgaaccggt catggcagag
     6181 gtactggcac agcggcaggc tgaagaggcc atccgccgtg aaacggaacg tcgcgcagat
     6241 gaaattgtcc gtaaaatggc agagaacaaa cctgacctgc cggacggcaa aacagagcag
     6301 gctgtcaggg aaattgccgg gcaggagcgt gaccgggctg ccataactga acgggaagcc
     6361 gcgctgccgg agagtgtact gcgtgaacca caacgggtgc gggaagcggt ccgggaagtt
     6421 gcccgggaaa atttgctgca ggagcgtctg cagcagatgg agcgggatat ggttcgtgac
     6481 ctgcagaaag agaaaacccc gggcggagac tgatacagga agacaaacac tgatgacaac
     6541 ggataacacg aacacgacac gtaacgattc actggctgca cggaccgata cctggttgca
     6601 gtcatttctg gtctggtcac ccggacagcg ggatatcatc aaaacggtgg cactggtgct
     6661 gatggtactg gaccacatca atctgatatt ccagctgaag caggaatgga tgtttctggc
     6721 cgggcgagga gcctttccgc tttttgccct ggtgtggggg ctgaatctgt cccgtcatgc
     6781 gcatatccgg caaccggcca ttaaccggct gtggggatgg ggaattattg cccagttcgc
     6841 atattatctg gcaggctttc cctggtatga ggggaatatc ctgtttgcct ttgcagtggc
     6901 ggcacaggtg ctgacgtggt gtgaaacgcg cagtgggtgg cgtacagcag cggccatact
     6961 cctgatggcc ctgtgggggc ctttgtccgg caccagttac ggtattgccg ggttgctgat
     7021 gctggcagtc agcaaccggc tgtaccgggc ggaagacaga gcggaacgtc tggcgctggt
     7081 cgcctgcctg ctggctgtta ttccggcgct taaccttgcc accagtgatg cagcggcggt
     7141 ggccggtctt gtgatgacgg tgctgaccgt tggtctggtg ttgtgtgccg gaaaatcatt
     7201 accccgtttc tggcccggag actttttccc gacgttctat gcctgtcatc tggctgtgct
     7261 gggcgttctg gcgctgtgac gggtgtggta tctttggccg caagaggatg attcgtcaga
     7321 ggcagaacac agcatgacag agcagaagcg accggtactg acactgaagc ggaagacaga
     7381 gggaacagcg actgtccgca gccggaaaac catcatcaat gtcaccacgc caccaaagtg
     7441 gaaggtgaaa aagcagaagc tggccgagaa agcggcccgt gaagcagagc tggcggcaaa
     7501 aaaagcgcag gccagacagg cgctgtccat ttatctgaac ctgcccacgc tggatgaggc
     7561 tgtgaatacc ctgaagccct ggtggccggg attatttgac ggtgacacgc cccggcttct
     7621 ggcctgcggt atccgggacg tgttactgga agacgtggcg cagcggaata tcccgctctc
     7681 gcataaaaaa ctgcgcaggg cgctgaaggc catcacccgt tcagaaagct atctgtgtgc
     7741 catgaaagcc ggtgcctgcc ggtatgacac ggaagggtat gtgacggagc atatttctca
     7801 ggaggaggaa gcgtatgcgg gagcgcgtct ggcgaaaatt cgtcgccaga accggataaa
     7861 ggcagaactt caggccgtgc ttgatgagaa ataaaaaaag cctcccccag agagaggagg
     7921 cagggaaata aggcttaaaa ggaaataact tccgcttccg aaaggaagcc agtccactga
     7981 attatttatc acaataatac tgacaactaa agggggacaa gaaaatgaat ggattcagaa
     8041 acagttcacg gaacggccag gtctggcgtt accagcgtgc cggcgggcgg gccgttattc
     8101 tggaagtcag tggacgctgg atggaagcgg cagaagcatg gcgacgggct gcctgtgttg
     8161 cgcctaggac agactggcag cagtttgccc ggaaaagggc tgaacactgc caccggcgct
     8221 gccggggaag ggggtaacga aaaaagcagc cttcattact ccaggagtca gaaggctgaa
     8281 aggagtttat gagatttgct tcttaatatc cggtcgggca gtatgaccgg acagttctga
     8341 gtagcacaga gtcttttccg cattaagtcg attttttata ttttgtgatt aatttcacaa
     8401 aataaggtgt tattcaatgt gtgctgcact attcaggggg gctgaaatac aggtgccatt
     8461 tatctgatat ggagaataac atgaggaaat atattccact ggtattattt atcttttcat
     8521 ggccggtatt gtctgcagat attcatggac gggttgttcg tgtactggac ggtgatacca
     8581 tcgaggtcat ggactcactg aaggcggtgc ggatcaggct ggtaaatatt gatgcaccgg
     8641 aaaagaaaca ggattatggc cggtggtcaa cagacatgat gaaatcactg gttgcaggaa
     8701 aaacggttac cgtcacatat tttcagcgag atcgttatgg tcgtattctc gggcaggttt
     8761 atgcaccaga cggaatgaat attaatcagt ttatggtccg ggccggggct gcctgggtat
     8821 atgagcagta caacacagat cccgtgctac ctgtccttca gaacgaagcc agacaacaaa
     8881 aacgtgggct ctggtcagat gctgatccgg ttcccccctg gatatggagg caccgtaaat
     8941 aaagcgatgg caatcctatc attcatctgt tctcagcggg aataaaaatg gcaaaaacaa
     9001 aacaggaatg gctgtatcag ttacggcgat gttcatcagt caatacgctg gaaaaaatta
     9061 ttcataaaaa cagagacagt ttatcaaaca gtgaacgtga atcatttaat tcagcagcag
     9121 accaccggct agcggaatta atcaccggaa agttatatga caggatacca aaagagatat
     9181 ggaaatatgt aaggtaataa ttcagcaata attaattgcc aggagcagat aaataatgaa
     9241 gttgattatt tttattctca ttgttctgat tattgcagcg ctacttatcc ggattatcct
     9301 cagaagtgta aatcagcatt ctcctttgct gatgcaattg catgcggcag gtatacggac
     9361 cggtgatgca gagcgaatac tgtccagcgg tgaatactgg caacgtcaga cgacgctgct
     9421 gacagaaagg gaagtcagtt ttatgaaagg actgttcaga attgtggata tgacgcggtg
     9481 gtatctgtgt ccgcaggtac gggtcgcgga tatcgtccag ctgaacggga atatccggcc
     9541 acgatcacgc cagtggtggc agttattcag gatggtgtct cagtggcatg ttgatgtggt
     9601 tatcgttgag ctgcgttcgt tcagtattgt tgcagcagta gagctggatg atgccagcca
     9661 tttacgaccg gaacgcagac gccgggatat tcttctggaa gaggttctga ggcaggctgg
     9721 tattccgttg ctcagaagcc acgatgccag aaaactgctg cagatgaccg gagaatggct
     9781 gaatacaaca ggggctgatc agcagtcacc ggaacatcgt agctgacgcc ttcgcgttgc
     9841 tcagttgtcc aaccccggaa acgggaaaaa gcaagttttc ctcgctcccg gcgtttccat
     9901 aactgaaaac catactattt cacagtttaa atcacattaa acgacagtaa tccccgttga
     9961 tttgtgcgcc aacacagatc ttcgccacaa ttctcaagtc gctgatttca aaaaactgta
    10021 gtatcctctg cgaaacgatc cctgtttgag tattgaggag gcgagatgtc gcagacagaa
    10081 aatgcagtga cttcctcatt gagtcaaaag cggtttgtgc gcagaggtaa gcctatgact
    10141 gactctgaga aacaaatggc cgctgttgca agaaaacgtc ttacacacaa agagataaaa
    10201 gtttttgtca aaaatcctct gaaagatctc atggttgagt actgcgagag agaggggata
    10261 acacaggctc agttcgttga gaaaatcatc aaagatgaac tgcagagact ggatatacta
    10321 aagtaaagac tttactttgt ggcgtagcat gctagattac tgatcgttta aggaatttta
    10381 tggctggcca cgccataagg tggcagggaa ctggttctga tgtagatgta caggagccag
    10441 aaaagcaaaa accccgataa tcttctttaa ctttggcgag tcagaaagat taccggggcc
    10501 cacttaaacc gtatagccaa caatcaagct atgcggggag tatagttata tgcccggaaa
    10561 agttcaagac ttctttctgt gctcgctcct tctgcgcatt gtaagtgcag gatggtgtga
    10621 ctgatcttca acaaacttat taccgccagg taaagaaccc gaatccggtg ttcacacccc
    10681 gtgaaggtgc ccggacgctt ccgttctgcg ggaaactgat ggaaaaggcg gtgggcttca
    10741 cctcccgttt tgatttcgcc attcatgtgg cacatgcccg ttcgcttggt ctgcgtcggc
    10801 gcatgccacc ggtactacgt cgccgggcca ttgatgcgct gctgcagggg ctgtgttttc
    10861 actatgaccc actggccaac cgcgtccagt gttccatcac cacgctggcc attgagtgcg
    10921 gactggcgac ggagtctgct gccggaaaac tctccatcac ccgggccacc cgggccctga
    10981 cgttccttgc agagctggga ctgattacct accagacgga atatgacccg cttatcgggt
    11041 gctacattcc gaccgatatc acgttcacat ctgcactgtt tgctgccctc gatgtatcag
    11101 aggaggcagt ggccgccgcg cgccgcagtc gtgtggaatg ggaaaacaga cagcgcaaaa
    11161 agcaggggct ggataccctg ggtatggatg aactgatggc gaaagcctgg cgttttgttc
    11221 gtgagcgttt ccgcagttac cagacagagc ttaagtcccg tggaatgaag cgtgcccgtg
    11281 cgcgtcgtga tgcggacagg cagcgtcagg atattgtcac cctggtgaaa cggcaactga
    11341 cgcgtgaaat ctcggaaggg cgcttcactg ccagtcgtga ggcggtaaaa cgtgaagtgg
    11401 agcgtcgtgt gaaggagcgc atgattctgt cacgtaaccg taattacagc cggctggcca
    11461 cagcttcccc ctgaaagtga cctcctcaga ataatccggc acgcgccgga ggcattcgca
    11521 cgcctgaagc ccgccagtgc acaaaaaatc agcgctacat acaaaaaaca acctcatcat
    11581 ccaccttctg gtgcatccgg tcccccctgt ttttgataca aaacacgcct cacagacggg
    11641 gaattttgct tatccacatt aaactgcaag ggacttcacc ataaagttac aaccgttcac
    11701 gtcataaagc gccagccgtc agccctacag ggtgcaatgt atcttttaaa cacctgttta
    11761 tatctccttt aaactactta attacattca tttaaaaaga aaacctgttc actgtctgtc
    11821 ctgtggacag acagatatgc acctcccacc acaagcggcg ggccccgacc gaagccggtt
    11881 tagttacaac atgcaaacat aaacccctaa aaaacccaag tccgacgcag aactgaaacc
    11941 acaaagcccc tccctcataa ctgaaaagcg gccccgcccc ggcccgaagg gccggaacag
    12001 agtcgctttt aattatgaat gttgtaacta tattatcatc gctgtcagtc ctctggctgg
    12061 acgtatcgag tacacgctcg taagcggccc tcacggccct cacggcccgc taacgcggag
    12121 atacgccccg actgcgggta aacccttgtc gggctccgac cgcgcacaga agctctgtca
    12181 tggctgaaaa cgggtatggc ttggcagcta ccatgttctg tcaagaaaaa tcgcttgaac
    12241 tccgacgtac agccccctaa gtactgccag caagctgtca gcactaagtc cccgatacag
    12301 cgcggcgtag ccgcgctaac ggggttaaaa gggcttacct atacttcatc atcgctgaaa
    12361 gcccgcatgg cctcgcaggg cagagatggg ataggtgaaa cctatcaata cgtaccggct
    12421 tacgccgggc ttcggcggtg ttactcctgt accatatgta actacatcat gccgccttac
    12481 atgcgctacg cgcatatgaa gacaaatagc ccacatcaaa cggtttttag gtcttcagta
    12541 cgccatagca ccagtgcacg agttttctca tcagcgcacc aatggcacac attttggcct
    12601 tacctctcag gcataatcgc tcatacatcg ctttcatcaa tgggttaaat ctcagaccac
    12661 acaacgaagc cagatacagt ttcgcccgga tttccggcgg accaattttt gacagtttcg
    12721 gacaccctct gaccgaggtg ccggaatatt tttcaacggg aacgacacct aaaaatgcag
    12781 ccgcctgttc acgtatagga aattgaaaaa ccagacgat
//
LOCUS       DADMIB010000121        12774 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.121, whole genome shotgun sequence.
ACCESSION   DADMIB010000121 DADMIB010000000
VERSION     DADMIB010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12774
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.121"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..454)
                     /locus_tag="JNZ89_003127"
     CDS             complement(<1..454)
                     /locus_tag="JNZ89_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8936916.1"
                     /translation="MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTD
                     NTALPKAVEMQYLPGQGLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSLDASKIVPL
                     TVTWGGEEIKADAATTFTATKIFASDALTNGSLAKNLMFAQTTKGVLET"
     gene            complement(484..1200)
                     /locus_tag="JNZ89_003128"
                     /pseudo
     CDS             complement(484..1200)
                     /locus_tag="JNZ89_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225871.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
     gene            1496..2272
                     /gene="exuR"
                     /locus_tag="JNZ89_003129"
     CDS             1496..2272
                     /gene="exuR"
                     /locus_tag="JNZ89_003129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ExuR"
                     /protein_id="HAY8936917.1"
                     /translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV
                     SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ
                     LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA
                     AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL
                     ENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK"
     gene            2617..3279
                     /locus_tag="JNZ89_003130"
     CDS             2617..3279
                     /locus_tag="JNZ89_003130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8936918.1"
                     /translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP
                     AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
                     LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS
                     GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN
                     RG"
     gene            3283..3666
                     /gene="mzrA"
                     /locus_tag="JNZ89_003131"
     CDS             3283..3666
                     /gene="mzrA"
                     /locus_tag="JNZ89_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EnvZ/OmpR regulon moderator MzrA"
                     /protein_id="HAY8936919.1"
                     /translation="MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVH
                     QGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYI
                     IAQQDNNSQAMQWLTRLRDNSHRFG"
     gene            3813..4181
                     /locus_tag="JNZ89_003132"
     CDS             3813..4181
                     /locus_tag="JNZ89_003132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HAY8936920.1"
                     /translation="MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQ
                     NRIDGLNKALSEVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAK
                     RERKLAEAQEELKKLEARDY"
     gene            4219..4524
                     /locus_tag="JNZ89_003133"
     CDS             4219..4524
                     /locus_tag="JNZ89_003133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HAY8936921.1"
                     /translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE
                     QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR"
     gene            4527..4931
                     /locus_tag="JNZ89_003134"
     CDS             4527..4931
                     /locus_tag="JNZ89_003134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936922.1"
                     /translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK
                     ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW
                     TLRKSRKSTLLRHTRHELANDRQLLEEESREQ"
     gene            4921..5220
                     /locus_tag="JNZ89_003135"
     CDS             4921..5220
                     /locus_tag="JNZ89_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936923.1"
                     /translation="MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWN
                     MLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG"
     gene            5316..5798
                     /locus_tag="JNZ89_003136"
     CDS             5316..5798
                     /locus_tag="JNZ89_003136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HAY8936924.1"
                     /translation="MILSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARI
                     LMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTA
                     LFTAGFTLLTAFLFHSKFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
                     "
     gene            5868..6771
                     /locus_tag="JNZ89_003137"
                     /pseudo
     CDS             5868..6771
                     /locus_tag="JNZ89_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708909.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
     gene            7064..7429
                     /locus_tag="JNZ89_003138"
     CDS             7064..7429
                     /locus_tag="JNZ89_003138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY8936925.1"
                     /translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML
                     GWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN
                     CQAGTPGENRFGPDPKLEP"
     gene            7671..8027
                     /locus_tag="JNZ89_003139"
     CDS             7671..8027
                     /locus_tag="JNZ89_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY8936926.1"
                     /translation="MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLIL
                     GLEFPFLSLIYLAATIIPVIALCVRRLHDTDRSGVWALLYLVPIIGWLVLFVFACLEG
                     NSGSNRYGNDPKFGSN"
     gene            complement(8078..8974)
                     /locus_tag="JNZ89_003140"
     CDS             complement(8078..8974)
                     /locus_tag="JNZ89_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8936927.1"
                     /translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK
                     LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIV
                     TEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSS
                     EINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLD
                     KQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWR
                     RDSMGEAKSWCLREIPKLFSGK"
     gene            9079..9780
                     /locus_tag="JNZ89_003141"
     CDS             9079..9780
                     /locus_tag="JNZ89_003141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HAY8936928.1"
                     /translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN
                     QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYS
                     EHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
                     LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL
                     VADSPLRALLIDLPV"
     gene            9803..9967
                     /locus_tag="JNZ89_003142"
     CDS             9803..9967
                     /locus_tag="JNZ89_003142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312016.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936929.1"
                     /translation="MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAE
                     TRLAEDEATA"
     gene            complement(10101..11411)
                     /locus_tag="JNZ89_003143"
     CDS             complement(10101..11411)
                     /locus_tag="JNZ89_003143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HAY8936930.1"
                     /translation="MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAEL
                     EGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQ
                     AIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNS
                     VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEG
                     LSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQ
                     GITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAA
                     GMAWLEDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT
                     AVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR"
     gene            complement(11439..12771)
                     /locus_tag="JNZ89_003144"
                     /pseudo
     CDS             complement(11439..12771)
                     /locus_tag="JNZ89_003144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026203.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
BASE COUNT         3277 a         3244 c         3035 g         3218 t
ORIGIN      
        1 ctgtctccag aacacctttg gtggtttgag caaacatcag gtttttagcc agagaaccgt
       61 tagttaacgc atcggaagca aagattttgg ttgcggtaaa agtggttgcc gcatcagctt
      121 taatttcttc accgccccag gttactgtca gcggaacaat cttgctagca tccaggcttt
      181 gaaccagttg cgccggggaa actaactgca tttttacatc tttggtaacg tcgttagacc
      241 agattttggt catcaactgg taagattgca gaccctgccc cggcagatat tgcatttcta
      301 ctgctttcgg caacgcggtg ttatcggtct gtgtcatatc cagagcggca tcaacgttgg
      361 ccgttacagt aatatccttt tgtactgcca atgcggagcc tgcaacagaa aacatcgctg
      421 cgaccagaag agattttgca aatacctttt tcattactat tccttcgttt attacaatga
      481 taattaatgg accgccagtt caaactcgcc attatctttg gtgatccagt tattatattt
      541 gacaacgatt ttgtcgtagc cagatatgct ttcaagattt ctttcctgac cagggaagat
      601 gtttttattt acggtctgta tcttacaatt ttctttgcta ttatttttac aataagcgat
      661 cgttaaaatc tttaagcgtt gattccctgc attaactaat ttttgggcag catttacttc
      721 taacttagca ataggttgct gaggtggaac actaacaaca atcccccaaa ttaagctaac
      781 agttaactgc atagagaaat cttttttatc tgtggcaacg tcatcaatac tgggaaccgc
      841 ttcaaattta acgcgttaat ttttttcttt ttgctctggt tccattgcaa caaagcgcac
      901 agttttgcta ctaccggctg gtaaagcgaa tttaggtggc ataacaacca gatgatttgc
      961 atcaccggat ttaatctcaa cttcattttc ctgaggcgtc gatggattat cgatacggaa
     1021 tactgtcgcc ttgatgtact gaacttcatt acttttagat attacgcgaa cgttgccttc
     1081 atcctgacta ttaatggaaa cagccatagg ataaacagtc atatttgact gtgccaaaaa
     1141 aggagcgaac acgaataaaa gcggcgcaag ccgtgataag agattaattt tcgccaccat
     1201 ataaatttga tcttacaata ttgtttccaa aaagttggtg tattagagat gtagatttat
     1261 tgtaagtcaa tataaaaaag catttttagt taatattaaa tttaaaggct gggaattaac
     1321 ttgctgaaat ttagtagctt tcacaatgac gatacttatt ttttaggaat ttataaatat
     1381 tcacaatatt aattcaatac attaattcaa tcaccaaatt tatatatgac caatggcata
     1441 cccatgaata aagtggtatg ataacttcgt ccgcattcca ctccgggaga cgcatatgga
     1501 aatcactgaa ccacgccgtt tgtatcaaca acttgccgct gacctgaaag agcgcattga
     1561 acagggcgtc tatctggtgg gtgataaact gcctgccgaa cgctttattg ccgatgaaaa
     1621 gaacgtcagc cgaacggtag ttcgtgaagc catcatcatg ctggaagttg aaggctatgt
     1681 ggaggtgcgt aaaggttcag gtattcatgt ggtttccaac cagccgcgcc atcagcaggc
     1741 ggctgacaat aatatggaat tcgccaatta cggtccgttt gagttgcttc aggctcgcca
     1801 gctcatcgaa agtaatattg ccgagttcgc ggcaactcag gtaacgaaac aagacatcat
     1861 gaaactgatg gccattcagg aacaggcgcg cggcgaacaa tgcttccgtg attccgagtg
     1921 ggatttacag ttccacattc aggtagccct ggcgacgcag aactccgccc tggcggccat
     1981 cgttgaaaaa atgtggaccc agcgtagcca taacccgtac tggaaaaaac tacacgaaca
     2041 cattgattcc cgtaccgttg ataactggtg tgatgaccac gatcaaattc tcaaggcgtt
     2101 aattcgcaaa gatccccatg ctgctaagct ggcaatgtgg cagcatctgg aaaacaccaa
     2161 aatcatgtta tttaacgaaa ccagcgacga tttcgagttc aatgccgacc gctatctatt
     2221 cgccgaaaac ccggtagtgc atctcgatac ggccaccagt ggcagtaaat gaaactcctg
     2281 tccgacaggc gctgcgacgc gcctgttcgc ttcgtcggta agcgaaaagt ataaagtgtc
     2341 agcctgtgta aatcctctcg ccaccctccc ctgcattcag caaaatcaga ctccacggac
     2401 atgtaatttt gataacgaac aacgttgacc tttgttacaa ttagattcaa tttgaattta
     2461 tgtttttgaa tgctttctta tctcacgatt taacagggaa tagttcaggc tgtgttgatg
     2521 tatcaaaccc gcagaacata ccaaaacagc aataacattg cggtagtgca tcttttaaaa
     2581 ccagcgtggc gttaaccgat tcaccaggaa taatgaatgg aacttttgac ccaattgctg
     2641 caagccctgt gggcgcagga ttttgaaacc ctggccaatc catcgatgat tggcatgttg
     2701 tattttgtct tgtttgtaat tttgttcctt gaaaacggct tgcttccagc ggccttttta
     2761 ccgggcgaca gtttactggt attggtcggc gtgttgattg cgaaaggcgc gatgggttac
     2821 ccgcaaacga ttctgctgct gaccgttgcc gccagcctcg gctgctgggt cagctatatt
     2881 caggggcgat ggctgggcaa tacccgcacc gtacaaaact ggctatctca tttacccgcg
     2941 cattatcatc aacgcgcaca ccatcttttt cataaacacg gtttatcggc gctgttaatt
     3001 ggtcgcttta ttgcgtttgt cagaacactg ctgccgacga ttgccgggtt atcagggctg
     3061 aataacgcgc gctttcagtt tttcaactgg atgagcggtc tgctgtgggt attgatcctg
     3121 acaactctgg gttacatgct cggcaaaacg ccggtatttt taaagtacga ggaccagctg
     3181 atgtcatgcc tgatgctgct cccggtggtg ctgctggtgt ttggcctggc aggttctctg
     3241 gtcgtgttat ggaaaaagaa atatggaaat cgggggtaag ggatgcaaat acctcgcatg
     3301 tcgcttcgcc agctagcctg gtccggcact gttttacttc tggtcggcac gctgttgctg
     3361 gcctggtccg cggttcgcca gcaagagtct acgctggcga ttcgtgccgt tcatcaaggc
     3421 acaacgatgc cagacggttt ttcgatctgg catcaccttg acgctcatgg cattcctttc
     3481 aaaagtatca cccccaaaaa cgacactctg ttaattacat ttgactccag cgaccagagc
     3541 gccgccgcaa aagcggtcct cgacagaaca ttgccccatg gctacatcat tgcgcagcag
     3601 gacaataaca gtcaggctat gcagtggctg acccggttac gggataactc tcatcgcttc
     3661 ggataacttc ctgttatccg aaacatatca ctcactttgg tgatttcacc gtaactgtct
     3721 atgattaatg aggcggtggt taacactacc gcttcgttgt ctggacaatc gttcctttgt
     3781 aacaggtccg aatcacaatg gaaggttcaa gaatgaaata ccgcatcgct ttagctgttt
     3841 ctctctttgc tcttagtgcc ggtagttatg ccactaccct gtgtcaggaa aaggagcaaa
     3901 atatccttaa ggagatcagc tatgccgaaa aacaccaaaa ccagaatcgt attgacggtc
     3961 tgaataaagc cctgagtgaa gtccgggcca actgttcaga tagccagctg cgtgccgatc
     4021 atcacaagaa aatcgcaaag cagaaagatg aggtggcgga acgccagcaa gatttagccg
     4081 aggcgaagca aaaaggcgat gccgataaga ttgccaaacg cgaacggaaa ctggcagaag
     4141 cgcaggaaga gctgaaaaag ctggaagcgc gcgactacta actcacaata gtcactactt
     4201 actcacctgg agaaaactat gtcgaaagaa cacactacgg aacatctgcg tgctgagttg
     4261 aaatcccttt ccgatacgct ggaagaggtg cttagctcat ctggcgagaa gtcgaaagaa
     4321 gagttgagta agattcgtag caaagcggag caggcactga aacagagccg ttatcgcctg
     4381 ggtgaaaccg gtgatgccat cgccaaacaa acccgtgtcg cggcggcgcg tgctgatgag
     4441 tatgtgcgtg aaaatccgtg gaccggcgtg ggaattggcg ctgcaatcgg tgtagtgctc
     4501 ggcgttctgc tgtcgcgtcg ttaattatgg cggacactca tcacgcgcaa gggcccggta
     4561 aaagcgttct gggcatcggg cagcgaattg tttccatcat ggttgaaatg gtggaaacac
     4621 gtctgcggct ggcggtggtg gagctggaag aggaaaaagc taatctcttt caacttttac
     4681 tgatgctggg cctgacgatg cttttcgctg catttggtct tatgagcctg atggtgctaa
     4741 ttatttgggc ggttgatccg caatatcgcc tgaatgcgat gattgccacc accgtggtgt
     4801 tgctgctact ggcactgatt ggcggtatct ggacgttacg taaatcgcgt aaatccacct
     4861 tgctgcgcca tacacgccat gagctggcaa acgatcggca actgctcgag gaggagtccc
     4921 gtgagcagta aagtcgaacg tgaacgacgt aaggcgcaac tgcttagcca gatccagcaa
     4981 caacggctgg atctttccgc cagtcgtcgt gaatggctgg aggcaacagg cgcttacgat
     5041 cgtcgctgga atatgctgct aagtctgcgc tcctgggcgc tggttggcag tagcgtgatg
     5101 gcgatctgga cgattcgcca tcctaatatg ctggtccgct gggccagacg cggttttggc
     5161 gtatggagcg cctggcgtct ggttaaaacg accctcaagc agcaacagct tcgcggttaa
     5221 cttccctctg gccggagcca ttccggccct atcactcaaa ttttttgaag atttttgaca
     5281 gttttccttg ctaacaatca tcattcacca cgtttatgat tctctccatc gacagcaacg
     5341 acgctaatac cgcgcccttg cacaaaaaaa caatcagcag cctgagtggc gcagtggaga
     5401 gtatgatgaa aaaattagaa gatgttggtg tactggtagc gcgcatttta atgccgattc
     5461 tgtttattac cgcaggctgg ggaaaaatca ccgcttactc tggtacccaa caatatatgg
     5521 aagcaatggg tgtcccgggt tttatgctgc cgctggtgat tctgctcgag ttcggtggtg
     5581 gtctggcaat cctgttcggt ttcctgactc gcaccacagc cctgtttact gcgggcttta
     5641 cgctgctgac ggcattttta tttcacagca agtttgctga aggcgtcaac tcgctgatgt
     5701 tcatgaaaaa cctgacaatt tctggcggat tcctgctgct ggcaattacc ggtccgggcg
     5761 cgtatagcat cgaccgcctg ctgaataaaa agtggtaagc acgcgctata cttaacgata
     5821 aaaaacgagg aggaagctcc tcgtttttgc tattggagga gagaaaaatg gggcaactga
     5881 ttgacggcgt ctggcatgac acctggcccc actggcacag gcggttttat cgcagagaaa
     5941 gatcgttatc atctctatgt ttcactcgcc tgcccgtggg cgcaccgcac gctgatcatg
     6001 cgcaaactca aaggactgga accgtttatt tccgtttccg tagtgaaccc gctgatgctg
     6061 gaaaacggct ggacctttga tgacagtttt ccgggagcaa ccggagatac gctctatcaa
     6121 catgaatttc tgtatcagct ttatctccac gccgatccac actacagcgg acgagttact
     6181 gttcccgtgc tgtgggacaa aaagaaccac accattgtca gcaacgaatc agcagaaatc
     6241 atccgcatgt tcaataccgc gtttgatgcg ctgggcgcaa aagcgggtga ttactaccca
     6301 ccagccctgc aaacgaaaat tgacgaactt aacggctgga tttatgacac cgttaacaac
     6361 ggcgtgtata aagctggttt tgccaccagc cagcaagcct acgacgaggc ggtggcgaaa
     6421 gtgtttgaat cgctggcgcg actggagcag attttaggcc agcatcgtta cctgaccggc
     6481 aaccagctaa ccgaagccga tattcgcctg tggactacgc tggtgcgttt tgatccagtg
     6541 tatgtgaccc acttcaagtg tgataagcac cgcatcagcg attacctgaa tctgtatggc
     6601 ttcctgcgcg atatctacca gatgccgggg atcgccgaaa ctgtcaattt cgatcacatc
     6661 cgtaatcatt acttccgcag ccataagacc atcaacccta cggggattat ttcaattggt
     6721 ccgtggcagg atctcgatga accgcatgga cgagatgttc gcttcggtta aaaaaaggca
     6781 ccttacgagg tgcctctgat aattagctaa gtgcatgttg ttcatgtcgg atgcggcgtg
     6841 aacgccttat caaacctaca aaacgtttat attcaatatg ttaaaatgac cgcgtaggcc
     6901 agataagcgt agcgcatctg gcgattttgc gcttgtcatc agtcttagcg caccttcacg
     6961 gcactttatt aattccttga acgaatattt actgccattt cattcacgtc tattcttaat
     7021 ttgctgcttt aaaaacaagt gattgagcaa aattgaggca aaaatggact ggtatctgaa
     7081 agtactaaaa aattatgtcg gtttccgggg tcgtgcgcgg cgcaaagagt actggatgtt
     7141 tattctggtc aacatcatct ttacgttcgt gctggggctg ctggataaaa tgttaggctg
     7201 gcaacgcgcc ggtggcgaag gcatcctgac gacaatctac ggtattctgg tgtttttacc
     7261 gtggtgggcg gttcagttcc gccgcctgca cgacaccgac cgctcggcgt ggtgggcact
     7321 gttgttctta atcccgttta tcggctggct tattatcatc gtctttaact gccaggcggg
     7381 tacgccaggc gaaaaccgct ttggaccaga tccgaaactg gaaccttaaa acaaatctgc
     7441 tcgccggatg tctgactcat ccggctttta tcatcatgtt gatgaatgaa taatttacta
     7501 atgtttattt aaaatatttc aatgtcgtta tataaattac ctataaaaaa caaccatgta
     7561 tttatcttaa atatcaaaac ctttataaca tccgaaaaag aaagatacga atagcattta
     7621 cacaataccc ggaatagact ttcgtcactt ttaattaaag ggatgttttt atgcagtggt
     7681 atttagccgt attaaaaaat tatgttggtt tctctggtcg cgcacgtcgt aaagagtact
     7741 ggatgtttac tctgattaac gccatcgtcg gcgctattat caatgtcatt caattgattt
     7801 taggtttaga gtttccattc ctttctctca tttacctggc agcaacaatc attccggtca
     7861 ttgctctgtg tgttcgtcgt ctgcacgata ctgaccgttc aggtgtgtgg gcgcttctct
     7921 atctggtacc gatcattggt tggttagttc tgtttgtatt tgcctgttta gaaggcaatt
     7981 ctggcagcaa tcgttacgga aacgatccta agtttggttc aaattaatct tagaattggg
     8041 gcgatatttc gccccttttt attaacaata ataaatatta ttttccgcta aaaagtttgg
     8101 gaatttcccg cagacaccag gatttcgctt cccccatact gtcacgacgc caggccataa
     8161 taatatcgat ctcgctggtc gattccgggc tgacgacacg caaccgccct tccgcaatat
     8221 ctttttcgac catcggatac ggcatcgtcg ccacgccaag ccccgccagt aatgcctgac
     8281 gtttatcttc aatcgtgctc accgttaagc gcggctgttt gtccagcagc tgtacggtca
     8341 acaccgggcg ctcacgagcg gtatccgcta ccgcaattcc acgatatttc acgcgcgtca
     8401 cttcagataa cggttccggc tcctgatgaa tcgggtgatc aggcgcggca acgtagacgt
     8461 tcattaaggt atagagcttg cgcgagttga tctccgacga ggaacgaaaa tgcatatccg
     8521 gcgcgataac gatatccgcc cgcccctgct ccagtcgttc ccacgccccc gccagcactt
     8581 cggtgatgat tgccagttgg gtattggctt ttgccgccag tttgtcgatt aacgggaaaa
     8641 aggcaggtgt cggtaccagc gcctcggtca caatggtgag atgcgtttcc caaccgcgcg
     8701 cgagggcttc cgcatcggta gtcagtttat ctgctgcttc cagcaaaacg cgccctcgct
     8761 ccagcaacat cctcccgaca ttggtgaatt tggtgcgatg gcccgagcgg tcaaacagca
     8821 ccacatccag ctcttcttcc agtttttgca tggtgtagct aagtgcggaa ggcacgcgtc
     8881 ccagctcatc cgccgccgcc gcaaaactgc cccggcgatc gatcgcatcc ataacccgta
     8941 gtgcttccag cgttaatgcc ctttctttgg ccatttcgtt ctcattcagg aaatttgaac
     9001 ataccgggca gaatatctgg ctaacaatgt agcgtccagc cccttaccat aaaaggaagt
     9061 aaagagaggt caagaattat gattactacc cgaactgcca ggcagtgtgg acaagcagac
     9121 tacggatggt tgcaggcccg gtatactttt tcctttggac actacttcga cccgaaattg
     9181 ttaggctatg cctccctgcg tgtgcttaac caggaagtgc tggccccagg tgccgccttt
     9241 cagccgcgaa cctatcccaa agtcgatatt ttaaatgtga ttctggatgg agaagcagag
     9301 tatcgcgaca gcgaaggcaa tcatgttcag gccagcgccg gtgaggcgtt gctgctctct
     9361 acccagccgg gtgtcagcta cagcgaacac aatctcagca aagacaaacc gttaacacga
     9421 atgcagcttt ggctggacgc ctgcccgcag cgagagaatc cgctgattca aaaactggcg
     9481 cttaatatgg gcaagcagca attaatcgcc tcgccagagg gtacgatggg aagcctgcaa
     9541 ttacgccagc aagtgtggct gcaccatatc gtgctcgaca aaggcgaaag tgcgaatttc
     9601 cagttgcatg ggccacgcgc gtatttgcaa tcgattcacg ggaaatttca tgcgcttacg
     9661 catcatgaag agaaagcggc gctgacctgc ggtgatgggg cgtttattcg tgacgaggct
     9721 aacattacgc tggttgccga ttccccactg cgcgctttgc tgatagattt gcctgtctag
     9781 ttgtttttac agggagatga tgatgagtaa aaaatcggcc aaaaagcgcc agccagtgaa
     9841 gcccgtggtg gcgaaagaac ctgctcgcac cgccaaaaat tttggctatg aagagatgtt
     9901 gagcgagctg gaagccatcg tcgcggatgc tgaaacgcgt ttagccgagg atgaagctac
     9961 cgcgtaaaga caggttgccg gatgcggcga aaacgcctta tccggcctac aaaatccaac
    10021 aacattaacg aattaaacaa cccgtaggcc ggataaggtg cgccagcatc gcatccggca
    10081 caatactcaa aacctggcgt ttatctggcc ttgctcgcca taatctcgat aatctgccga
    10141 tccgtttgct gcatcgaatg gcttgctaac gcacacaggt tggcaatcga ctgctcaaca
    10201 tcatgcgcca cgatcccttc attgccggtc acggcggtat catccagcgc cattaacacc
    10261 gctttccacg cagccgaagc actggtcgaa accttcatcg cgcagctgtt cgacgcacca
    10321 tcgcaaatca tgccgctgac atcgccgatc atactgctga tcgccatcga gatagtttca
    10381 taacgcccat cctccagcca tgccatcccg gcggcggccc ccattgctgc ggtcgttgcg
    10441 gcacaaagtg cagacaaacg cggtaactgg ttatggatgt aaattgcgct caaatgagaa
    10501 agcatcagcg cacgcgccag tcgttcatca tccgctccga agtgttctgc tacaaccacc
    10561 acaggcattg ttgcggtgat cccctggtta cccgagccgg agttactcat agccggaagc
    10621 gtagcgccgc ccatacgcgc atcggatgcc gcgctggtac gaatcacaat ggatgaagag
    10681 agatctttcg ccagcaaacc gcgctcgcac tgtttttcca gcgtcgcgcc aatatgcagc
    10741 ccccacttac cgctcaaacc ttcctgcgat aacgcacaat ttagcttcgc ggaatcgaga
    10801 ataaagcgga tcgccgcaaa cgggacttca ttgacgaact tcaggatctc agccagcgtc
    10861 gttctggaaa gcaccgtcag cggagactct tgctcgccct ctgccacaca cgcctgctgg
    10921 gtaaacacca cactattgtg cgtctcaata tgcacaatgt tggtatgccc gccgacgatg
    10981 gtgacacacg cccacttctc accgttccag actttggcgc gtgagaagag gatttcattg
    11041 caaggttcct ggatcttaac ggagactttc cccgccgcca gcagtgcttt ggcatcggca
    11101 attgcctgcg cagttgcgtc tttcagcact tccagcccgg cgttggcatt tccacctaac
    11161 gcccccagcg ccgccgcaat cggcagcccc accattcccg tgccgggaac ggtgacgccc
    11221 agaccgttct tcatcagatt tggcgaaacc caggcttcta cacgttcaac cggaccttcc
    11281 agttctgccg cagcaaccgc cgccgccagc gccagtgaaa tcggttcagt acatcccagc
    11341 gccggtttta cttcctcctg aacggcgagg atgtaacgct gccataacgg atttaaagtc
    11401 gaatcaaaca tattaaaaac cttaaaattt caggtaaatc aagaaaatgc caggaacgga
    11461 gaaacacaaa gcaacaaacc agtgacgata atcaggtaca gagacatccc tttgtatttg
    11521 tgcaatgccg gtactttgta aaccagccac gccgggatca ggcaccctac catgccgaaa
    11581 atcgggctac agatagaggt gaagctcaac accggtgcgt tcagtacgat ggcgctccag
    11641 gccagcaaaa tggcgaaaat catgatgccg cgctgaacaa gattttcgtt aatcttctcg
    11701 gcaggcatct tgcgacgcag gatgttcatt acgatccctt gcgttgcttc gcgaaagcct
    11761 aaatagacgc caaagaatgc agtcatgaca gcaaagatat tgagaatgac gctgaccact
    11821 ttcacccacg ctgcgccgtc accgctaata aactgtgcgg caatcgccag cgcggaaata
    11881 ttctgctcgt aggcttttac cgcttcgtca tgtcccatcg ccagcgtgaa cgacacggcg
    11941 tagaaaaaga cggtgacaaa taaaatgcca aacgcgatat tcattgcccg caatgcttta
    12001 tgccgcgcca cttcaattga tttttcccgc gagcgataag agatcaccat cgggcttaac
    12061 gtctggataa acagaatcga cgtcagggta aacggcagcg taataatggc gtttttcacc
    12121 agcagcccca gcggcggtag cgaaccgacg ttatacagat gccacattcc caccatcgac
    12181 acgcccagcg cagcgactac cagcagcttg gtcagcacca tgccggtcga aattttgaat
    12241 aacaatttct cgccgcgtga agagatcgcc accagaatgc aaatcagtac cagaccataa
    12301 aagggactgt ctgacagcac cccttccgtc acgccgaagg tatgcagata ggaagcacta
    12361 tcgttggtga tggcggtgga atagacgaac atccaaatca ccagcattac gaaatagagc
    12421 gcacctaaca ggatgcccca gtttttacct aaataaccgc taatgacact cgggtaatct
    12481 ttacattctg tgtgattctg ccagcgtatt aataaacaac cgctgaaaca gatacattgc
    12541 cgggtaacca atcaccgatg agagcaaaaa tacccacaat cccatcaaac cgacctgcac
    12601 cgggagaaaa acaatccccg cgccaatcgc catcccgata ctcataatca cccagccggt
    12661 gtcagtactg tcgaatttga tcgcttctcg ccactcgctc tcactcattc cagcacgacc
    12721 cgccggggtc gaagcgtctg caatgacgcc tttattcgat gcaatttcca taat
//
LOCUS       DADMIB010000122        12716 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.122, whole genome shotgun sequence.
ACCESSION   DADMIB010000122 DADMIB010000000
VERSION     DADMIB010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12716
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.122"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            4..1632
                     /locus_tag="JNZ89_003145"
     CDS             4..1632
                     /locus_tag="JNZ89_003145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001381416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HAY8936931.1"
                     /translation="MFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMS
                     GGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKQSVEGIA
                     TAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAED
                     LSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLIQETERRRRERNEVEQDVEV
                     AVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRI
                     LAERQIQETEIEREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQS
                     QAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAE
                     KEAAEMQAAAIVKLAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPA
                     VIEKSVEPMKSIDGIKIIQVDGLNRGSAAGDANTGNVGGGNLAEQALSAALSYRTQAP
                     LIDSLLNEIGVSGGSLAALTSPLTSTTPVAENVE"
     gene            1871..1930
                     /locus_tag="JNZ89_003146"
     CDS             1871..1930
                     /locus_tag="JNZ89_003146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY8936932.1"
                     /translation="MMKLVIILIVLLLVSFAAY"
     gene            complement(2050..3483)
                     /gene="hldE"
                     /locus_tag="JNZ89_003147"
     CDS             complement(2050..3483)
                     /gene="hldE"
                     /locus_tag="JNZ89_003147"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HAY8936933.1"
                     /translation="MKVTLSEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN
                     TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHP
                     TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASV
                     QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK
                     LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
                     GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAA
                     ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP
                     LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG
                     GEVLVLNFEDGCSTTNIIKKIQQDKKG"
     gene            complement(3531..6371)
                     /gene="glnE"
                     /locus_tag="JNZ89_003148"
     CDS             complement(3531..6371)
                     /gene="glnE"
                     /locus_tag="JNZ89_003148"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HAY8936934.1"
                     /translation="MKPLSSPLQQYWQTVVERLPEPLAEKSLSAQAKSVLTFSDFVQD
                     SVIAHPEWLTELESQSPQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIA
                     WAQTLALVTEESILQQLSHLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM
                     GKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGF
                     VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR
                     AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ
                     LIRGGREPSLQSRSLLPTLSVIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT
                     QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE
                     QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLM
                     PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIA
                     SQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQ
                     LLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNDREGRG
                     FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFN
                     TRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQ
                     LTAHFDAVRREIMMLPREGKTLQTEVREMREKMRAHLGNKHRNRFDIKADEGGITDIE
                     FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL
                     ALQELPGHVSEDCFTAERDLVRASWQKWLVEE"
     gene            complement(6394..7695)
                     /locus_tag="JNZ89_003149"
     CDS             complement(6394..7695)
                     /locus_tag="JNZ89_003149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic triphosphatase"
                     /protein_id="HAY8936935.1"
                     /translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP
                     DNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEV
                     WPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELE
                     LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK
                     ADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHTLMLFGGIVPRKA
                     STHLRDLLTQCEATIASAVSAVTAVYSTKTAMAKLALTEWLVSKAWQPFLDAKAQSKM
                     SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQ
                     AWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR"
     gene            7937..8557
                     /locus_tag="JNZ89_003150"
     CDS             7937..8557
                     /locus_tag="JNZ89_003150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HAY8936936.1"
                     /translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHY
                     RLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQV
                     KTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASV
                     QLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPTRKRKERWMN"
     gene            8621..9859
                     /gene="cca"
                     /locus_tag="JNZ89_003151"
     CDS             8621..9859
                     /gene="cca"
                     /locus_tag="JNZ89_003151"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused tRNA nucleotidyltransferase/2',3'-cyclic
                     phosphodiesterase/2' nucleotidase/phosphatase Cca"
                     /protein_id="HAY8936937.1"
                     /translation="MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR
                     DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD
                     NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLM
                     REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA
                     PARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA
                     GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR
                     VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL
                     TRRRIAAVASWKEQRCPKPD"
     gene            complement(10016..10837)
                     /gene="bacA"
                     /locus_tag="JNZ89_003152"
     CDS             complement(10016..10837)
                     /gene="bacA"
                     /locus_tag="JNZ89_003152"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HAY8936938.1"
                     /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
                     AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA
                     VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
                     GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF
                     LTTGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF"
     gene            complement(10928..11296)
                     /gene="folB"
                     /locus_tag="JNZ89_003153"
     CDS             complement(10928..11296)
                     /gene="folB"
                     /locus_tag="JNZ89_003153"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional dihydroneopterin
                     aldolase/7,8-dihydroneopterin epimerase"
                     /protein_id="HAY8936939.1"
                     /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS
                     DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV
                     ARAANVGVIIERGNNLKENN"
     gene            11401..12018
                     /gene="plsY"
                     /locus_tag="JNZ89_003154"
     CDS             11401..12018
                     /gene="plsY"
                     /locus_tag="JNZ89_003154"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HAY8936940.1"
                     /translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT
                     NVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF
                     KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
                     QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE"
     gene            complement(12031..>12716)
                     /gene="ttdR"
                     /locus_tag="JNZ89_003155"
                     /gene_synonym="dan"
     CDS             complement(12031..>12716)
                     /gene="ttdR"
                     /locus_tag="JNZ89_003155"
                     /gene_synonym="dan"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TtdR"
                     /protein_id="HAY8936941.1"
                     /translation="VDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQV
                     HFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSL
                     QELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIML
                     RSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLVAWCQQRLG
                     KPDEGYQVM"
BASE COUNT         3065 a         3598 c         3177 g         2876 t
ORIGIN      
        1 tggatgttta ccgcgattat tgccgtatgc attctgttta ttattggaat tattttcgct
       61 aggctctatc gtcgcgcttc ggcagagcaa gcttttgttc gtactggttt aggtgggcaa
      121 aaagtggtga tgagcggtgg cgcaatcgtg atgccgatct ttcatgaaat aatccccatc
      181 aatatgaata ctctgaagct ggaagtcagc cgctcaacca ttgatagcct gattacgaaa
      241 gatcgtatgc gtgtcgatgt agtagtcgct ttctttgtac gggtaaaaca gtctgtagaa
      301 ggcatcgcca ctgcggcgca gacgttgggg caacgcacgc tatcaccaga agacttacgt
      361 atgttggttg aagataaatt tgtcgatgcc ctccgtgcaa cagctgcaca aatgaccatg
      421 catgagttac aggatacccg cgagaacttc gtgcagggag tacaaaatac tgtcgcagaa
      481 gacctgtcga aaaacggtct tgagctggaa agcgtttcac ttaccaactt taaccagacc
      541 tcgaaagaac atttcaatcc gaacaatgcc tttgacgccg aaggtttaac caaactgatt
      601 caggagacgg agcgccgtcg tcgcgaacgt aacgaagttg aacaggatgt agaagttgcg
      661 gtgcgtgaga aaaaccgtga tgcactttcg cgcaagttgg agattgaaca acaagaagcg
      721 tttatgacgc ttgagcagga gcagcaggtt aaaacccgta ctgccgaaca gaatgcacgt
      781 attgcggctt ttgaagctga acgtcgtcgt gaagcagagc agacgcgaat tctggctgaa
      841 cgacaaattc aggaaacgga gatcgagcgc gagcaggccg tccgctcaag aaaggttgag
      901 gctgaacgtg aagttcgtat taaagagatc gaacagcagc aggtcaccga aatcgccaac
      961 cagacgaaat cgatcgctat tgccgccaaa tcggaacaac agtcccaggc agaagcgcgt
     1021 gctaaccttg cactcgcaga agcagtaagt gcgcaacaaa acgtagaaac cactcgccag
     1081 accgcagaag ccgatcgtgc taaacaagtt gccctaatcg ctgccgcgca ggatgcagaa
     1141 accaaagcgg ttgaactgac cgtgcgggcg aaagcagaaa aagaagccgc agagatgcag
     1201 gcggcggcta tcgttaagtt agccgaagct acacgtaaaa agggtctggc ggaagcagaa
     1261 gcacaacgtg cgctgaacga tgctatcaac gtactttctg atgaacaaac cagccttaaa
     1321 ttcaaactgg ccttgttgca ggcgctacct gcggtaatag aaaaatccgt tgagccgatg
     1381 aaatctattg acggtatcaa gattattcag gtcgatggtc tgaatcgtgg cagcgctgcg
     1441 ggtgatgcaa acacgggtaa tgtggggggc ggaaacctgg cggaacaagc attatcagcc
     1501 gctctctctt accgcacaca ggcaccgctg attgactcct tgctcaatga aattggcgtt
     1561 tcaggcggct cactggcggc attgacttca cccttaacct caacaactcc cgtcgccgaa
     1621 aacgtagaat aaattttcag ctatgaacgt ccctggcaca aaaagccggg gattttttat
     1681 atctgcgttc cgctaaaaac tgcaaatgat caggtcgttg caacgttttg cgtgaccgct
     1741 cggggaaggc aaaactgcct ctgggaaagc gttgctcgag gtccggcgct catcaacaat
     1801 cggggagtca gcaaagggct gaaacgggaa agcccctccc gaggaagggg ccttacagaa
     1861 ggaaagggtt atgatgaagc tcgtcatcat actgattgtg ttgttactcg taagtttcgc
     1921 agcttattaa cagccaatca gaggggggag aaatcctccc tcacccttgt tcctttactt
     1981 taggttgaaa aaacaacagc gtcaataggc ctgcctgcta cgaagcgaga tctgtgaacc
     2041 gctttccggt tagccttttt tatcctgttg gatcttcttg atgatgttag tggtcgagca
     2101 accgtcttcg aagttgagca ccagcacttc gccgccgttg gcccagactt ctttactccc
     2161 ggcgatctct tctggtttat agtcgccgcc cttcaccagt aaatctggca ggatcccggc
     2221 gatcaagcgc tgcggcgtgt cttcttcaaa cgacaccacc cagtcgaccg cttccagtgc
     2281 gcccagcaca atcatacgct gttcgagcgg gttaacgggg cgggaatccc ctttcagccg
     2341 tttggtggag gcatcgctgt tcacagcgac aatcagacgg tcacccagtt tgcgagcatt
     2401 tgccagatag gagacgtgcc cggcatgcag gatgtcaaag acaccgttgg tcattaccac
     2461 cttttcgccg cgtttacgcg ctgccgctac ggccagcttc agttcctctt cggtcatcac
     2521 gccaaagccg gtatctgcgc gcccacgcac tgcattttcc agctcgatcg gcgaaaccgt
     2581 ggaggttccc agtttgccga ccaccacgcc agccgccgca ttggcaaaga agcaggcttc
     2641 ttccagcgaa ttacccgctg ccagcgttgc cgccaggacg ccaatcaccg tgtcgcccgc
     2701 accggtaacg tcatacactt cctgcgcctg ggttggcata tgcagcggcg ctttacccgg
     2761 ttgcagcagc gacataccct gttcggaacg ggtcactaac agagccgaga gttcgtaatc
     2821 ggcaatcagt ttcatgccgc gctcaacaat ctcttcttcg gtcttacatt taccgacaac
     2881 agcttcaaat tccgagagat tcggcgttaa cagcgtagcg ccgcggtagc gctcaaaatc
     2941 ggtacctttt ggatcaatca gcaccggaac gcccgcttta cgcgccagtt ggatcatctg
     3001 ctgtacgctt gccagcgcac ctttggcgta gtcagaaagc accagcgcgc caatcgaact
     3061 cagcgcctga ttaatccgct cgtgcagcgg ctgcggatca acgccttcga aaccttcttc
     3121 gaaatccaga cggatcagct gttggttgcg ggaaagtacc cgtaatttgg tgatggtcgg
     3181 atgcgtcggt acagaaacga agtcgcattt gacgttgacg tcggccagag atttactcag
     3241 cgcgcgcgct gcatcgtcaa tgcccgtcaa cccgaccagg cgtgcattag caccgagaga
     3301 agcgatattc atcgccacgt tagccgcgcc gcccggacgt tcttcgatgg tattcacttt
     3361 aaccacgggc accggcgctt ccggcgagat acggctggtg ggaccgtacc agtaacgatc
     3421 cagcattaca tcaccaacca ccatcactcc tgcacgttca aactctgaca gcgttacttt
     3481 cattcctgtc tcctgagaga ttcaaaattt gcgcgcgata ataccatact tcattcttcc
     3541 accagccact tctgccagct tgcccgcacc agatcacgct ctgcggtgaa gcaatcctcc
     3601 gacacatggc ccggcaattc ctgtaatgcc agatgatgaa gttcatcgcg cagcgtcgtg
     3661 taagcacggg tcagcgccat cgcttcctgc tcttccataa tgtcgttttg cgccagcagc
     3721 tccagaatac gcacgttgtc tgaccagcgc gttaacttcg gtttttcatg agcgtagcgc
     3781 aacaccagat attgggtaat aaattcgata tcggtaattc cgccttcatc ggctttgata
     3841 tcaaagcgat tacgatgttt attgccgaga tgagcgcgca ttttctcgcg catttcccgc
     3901 acttccgttt gcagagtttt accttcacgc ggcagcatca taatctcgcg acgcactgcg
     3961 tcaaagtgcg cggtgagctg cggatcgccg tacactacac gcgcacgcac cagcgcctga
     4021 tgctcccacg tccaggcctc gtttttctga taatcagcaa atgcttctgc ggatgtcacc
     4081 agcattcccg ccgccccgga cggacgcagt cgtgcatcca cttcatacaa aatgccggaa
     4141 gaggttcgcg tattgaacag atgcataatg cgttgcgcca gacgcagata aaactgtcgc
     4201 ccgtcgattt cccgctcgcc gtcagtcatc gcatccattg ggcaatcatg gaggaagatc
     4261 aggtcaagat cggaactgta gcctaactcc cagccgccca gcttgccgta gccgaccacc
     4321 gcaaaaccac ggccttcgcg atcgttgagg tgatttggct taccgtagcg ggccaccatt
     4381 tgaacccacg cctgctgaac gacggcatct atcatagcct ctgccagcca ggttaagtga
     4441 tcgctcactt tcatcaccgg tagcgtacca gcgatatccg ctgcggcgat gcgtaacagc
     4501 tgcgcctgtt tgaactgacg cagcgcctca agctgttgct cttcgtcatc ttccggcacg
     4561 cgcagcaaat actggcgcaa ctcatcgcgg taggcatcgg tcgccgtcgg ctggtaaaga
     4621 gtgtttggat cgagcaattc atccagcaat aatggataac gcgccagctg gctggcaatc
     4681 atcggcgatg cggcacacag agaaatcaaa tgtttaagcg ccgcagggaa ttcactgagc
     4741 aattctaaat aggtggtgcg ggtaacaatc cccaccagca aggcggtaat gcgcgacagc
     4801 gtaacggcag cgtcttcacg cgcacagaca tcacttagca gatgtggcat cagatggtcg
     4861 agcacctgac gtcctcgcgg cccgatagta cgcttatcca gctctttgcg gaaatcagca
     4921 atcagcgtta ggacctgttt gcgatcatcc tcgctaagat gcgccagcac tggcgtagtg
     4981 tcatcttcct gcaacgcatc ctgccacagc tcacgccact gttccgacag cgactcttcc
     5041 tgagtttcac tttcgtcgtc gccaatcaat tcattaaaca cccggcgcac attggtcata
     5101 tgtgcggtca gcgccccggt cagttgcggc cagtcagcaa agtccatcgc ccacgccagc
     5161 cgcgcacggt taagctcatc agaaggaagc gtttgggttt gttcgtcgtt aatgctttgc
     5221 agcaggtttt ccagacgccg caggaacaga tatgccactc gcaattgttc agcatcgttt
     5281 tcagaaagca gatgcagcgc ggcaatgacg ctgagcgttg gtagtaaaga gcgcgactgc
     5341 agcgacggtt cgcgcccacc gcgaatgagc tggaacacct gaacgataaa ttcaatttcg
     5401 cgaatgccgc ctgcgccgag tttgatattg tcggtcaaac cacgtcgacg cacttcacgg
     5461 gcaatcatcc ctttcatgtt gcgcagcgac tgaatcacgc tgaaatcgat gtaacgacgg
     5521 aaaacaaacg ggcgcagcat cgcacgcaac tcgttagcat agacgccttc gctatcgccc
     5581 ataatccgcg ccttgaccat cgcgtaacgc tcccagtcgc gcccctgctc ctggtaataa
     5641 tcctccaacg cggcaaagct cagcaccagc gggccacttt cgccaaacgg acgcagccgc
     5701 atatccacgc gatagacgaa gccatcctgc gttggttgat ccaacacttt aatcagccgc
     5761 tgccccatgc gggtaaaaaa ctgcgcgtta tccagttccc ggcgtccgcc ctgcgtacaa
     5821 ccatgttccg gccaggcaaa aatcagatcg atatctgagg agaaattcag ttccccaccg
     5881 cccagcttac ccatgcctaa aatcagcagc ggttgcgctt cgccctgcgc attgcacggc
     5941 gttccccact cgcggcagca agcgtcatac agccagtcac gcgcggcgac aatcagcgtc
     6001 tccgccagat ggctgagctg ctgcaatata ctctcttcag taaccaaagc cagcgtttgc
     6061 gcccaggcga tgcgcaccat aatgcgccgc cggaatagcc gcagctcgcg cattaacccg
     6121 gcttcgtcac tcacattgct gagcgcctcc tgcaaccatg ccgcgtaatg ctgccattca
     6181 tcagcctgcg gcgattggct ttccagttcc gtcagccact ctggatgcgc aatcacgctg
     6241 tcctgcacaa aatcactgaa agtaagtact gacttcgcct gtgcgctaag tgatttctcg
     6301 gctaaaggct ctggcagccg ctcaacaacg gtctgccagt actgctgtaa cggtgaagag
     6361 agcggcttca taagcgattt tatccttgcc tgattaacgt tttccgctgt gcaaccagaa
     6421 cggttcctga ttgtttgcct cattacggaa atgttcaatt tcaatgcgtt gcccggtcgc
     6481 aatagcgtga cgcagcccct gccagttctc cagccaggct tgcgcgacga caggatcata
     6541 gtaacccgcc agcaacagta ttgagtcaat atcacgcgtc agacgtggca actggtcacg
     6601 gtagcgatcg cccaacggct ggcagaaaac gcttttcagt tcagcggcat ggcgggaaag
     6661 atggatatcg gcaaagcgtt tgaaggaatc gctcatttta ctctgcgctt tggcatctaa
     6721 aaacggctgc caggctttgc ttaccagcca ttcggtcaac gccagcttcg ccattgccgt
     6781 tttggtagag tagaccgccg tcacggcaga aaccgcagaa gcgatggtcg cttcgcattg
     6841 agtcagcaaa tcgcgtaagt gagtgctcgc tttgcgcggc acaataccac cgaacagcat
     6901 cagtgtatga cggaccagac caatggctgc cagcacctgt tctttcgccg catcgttgcc
     6961 gcgtacccac agttcttcat gatactgcca ttgcgctaac gccagctcga gcgccgcttc
     7021 cagcccctgt tccacatcgg cttttgccgc aacatgcaaa atggtggtcg gtttgatttc
     7081 acgcgccgga ttgccctgcg ccagatgata gccacgcgcc gctttgctca ggctgccctg
     7141 gcgtaatccg gtttgcgata ccagttggtt cgccagtttc agcaccgcgc gcgtgtcgcc
     7201 gctaagcagt tccagttcca gctcacagat aggttcagca aattcccccg ctttcacctc
     7261 cccctgatcg agagcgattt caattcggct gtcatcgacc gccaccagcc atttttcgcg
     7321 ataaaaatcg gtgctgaaca gcggttgtac gcgggaagcg agatcggcgg gcaattcgcc
     7381 gttcggccag acttccgtcg gtaactgcgc caggtcgagc gtcggttcgc tcaacgccac
     7441 gttatattcc gggcgctggt gtaagccgcc tgtcactctt cctgcaactt tcatggtcat
     7501 ctcatagcga ccgttttcgc cacgaatacg taagcccata tcgtgcccac gcagccagtt
     7561 atccggcgtt tcgtagtaaa tattcagcaa ctgcacgggg tcatggtgct cgccgcccag
     7621 cgtattgaga tggtcacgca acgcctcaac ggcactgtga ttaacaataa actttaattc
     7681 gatttcctga gccatggcct ttacttatcg gttatgtcac ataagtgacg atgaacggcg
     7741 aacttaatgc gatctttttt gtcagtagat agtattttgc gccaaattgc catgcaacgg
     7801 gcaatttgac gggcgtaaaa gtttgaagca gtggcaagac ctgacacaga ggattccgat
     7861 tgatgtcgaa tgctttgcgt agcgacactg atgccactac tatcgttcca ctttccatga
     7921 caataacgac agcctgatgc caaaattacg cctgatcgga ttaactttac tcgcacttag
     7981 cgccactgcc gtctcacacg ctgaagaaac gcgctatgtt tctgatgaac tgaatacctg
     8041 ggtccgtagc ggtccgggag atcattatcg cctcgtgggc acggttaacg ccggcgagga
     8101 agtgacctta ttacaaactg acgccaacac caattatgcc caggtgaaag acagctctgg
     8161 ccgtaccgcc tggatcccgt tgaaacaact tagcactgag ccaagcctgc gctcccgtgt
     8221 gccagatctg gaaaatcagg tcaaaaccct gaccgataaa ctcaccaata tcgataacac
     8281 ctggaatcag cgcaccgcag aaatgcagca aaaagtggcg cagagcgaca gcgtgatcaa
     8341 cggattaaaa gaagaaaatc agaaattgaa aaacgagctg attgtcgcgc agaaaaaggt
     8401 cgatgccgcc agcgtacagc tggatgacaa acagcgcacc atcatcatgc aatggtttat
     8461 gtatggcggt ggcgtgctgg ggcttggctt gctgctcggt ctggtactgc cacacctgat
     8521 cccaacgcgc aaacgcaaag agcgctggat gaactaaatc gccttcttcg ttgcactgtc
     8581 ttattattag gaattgtgta tttgacgaag ggatgatggc gtgaagattt atctggtcgg
     8641 tggtgctgtt cgggatgcat tgttagggct accggtcaaa gacagagatt gggtggtggt
     8701 cggcagtacg ccacaggaga tgctcgacgc gggctaccag caggtaggcc gcgattttcc
     8761 tgtgtttctg catccgcaaa cgcatgaaga gtatgcgctg gcacgtaccg aacggaaatc
     8821 cggttccggt tacaccggtt ttacttgcta tgccgcaccg gatgtcacgc tggaagatga
     8881 tcttaagcgt cgcgatctga ccattaatgc gctggcccag gacgataacg gcgagattat
     8941 cgacccgtac aacggtctgg gcgatctgca aaatcgtctg ttgcgccatg tttcccccgc
     9001 ttttggcgaa gatccgttac gcgttctgcg cgtggcgcgt tttgctgcgc gttatgccca
     9061 cctcggtttt cgtattgccg atgaaactct gacgctgatg cgcgagatga cccatgcggg
     9121 tgaactggaa cacctgacgc ctgaacgggt atggaaagag acggaaagcg ccctcaccac
     9181 ccgcaatccc caggtgttct tccaggtact gcgcgattgc ggtgcacttc gcgttttatt
     9241 cccggaaatt gacgccctgt ttggcgttcc ggcccctgcc aggtggcatc cggaaatcga
     9301 caccggtatt cataccttaa tgacgctctc aatggcggcg atgctgagtc cgcaggttga
     9361 tgtccgtttc gcaactttat gccacgatct cggtaaagga ctgacgccgc cagaactttg
     9421 gccgcgtcat catgggcatg gcccggcggg tgttaagtta gtggaacaac tatgccagcg
     9481 tctgcgcgtg ccaaatgaaa ttcgcgattt agccagactg gtggctgagt ttcacgatct
     9541 catccacacc ttcccaatgc tgaacccaaa aaccatcgtc aaattatttg attccatcga
     9601 tgcctggcgt aaaccgcagc gtgtcgagca actggcgctg accagcgagg ctgacgtacg
     9661 cggcagaacc ggttttgaat cagcggacta cccgcaaggc cgttggttgc gcgaagcctg
     9721 ggaagtggcg cagtcagtgc cgacaaaagc ggtcgttgaa gcgggattta aaggtgtgga
     9781 gattcgcgag gagctgaccc gacggcggat tgcggcggta gccagttgga aggaacaacg
     9841 ttgcccaaag cctgactgag tataaaacta aacgttaaca cgaaccatcc cctcgcccct
     9901 tcggggagag ggtgagggga acagaccagc accggtgcga acaatcaccc ccaccccggc
     9961 cctctcccta cagagcgagg gagaaaacca ggcctgctcc cgaacctttt ctcaatcaaa
    10021 agaacacgac gtacaccgca gccgccacaa taaagcgata aatggcgaac gggataaacg
    10081 aaatgcgctt aatcaattgc aggaaggttt taatcgctat cagcgccacc acaaaagcgg
    10141 tgataaaccc aacggcaaac atcgggatat cgccggttgt caggaagccc cagcttttgt
    10201 agagatcgag cgccgttgcg cccatcatca tcggtaccgc cagcaggaac gagaactcgg
    10261 aagcagcgta acggctcacg cccatcagca tcccacctga aatggtggcc ccggaacggg
    10321 agaaacccgg ccacagcgcc agacactgga aacagccaat cataaacgcc tgacgatagg
    10381 tcatatcatc aagacccggc gcacgcggct ctttcggctt caggcattcg gcggcaatca
    10441 gcaacaaacc gccaacgacc agtgcataca tcacatttat cgggttaaac aatgacttaa
    10501 tcgtgtcgtg gaacaacagc cccagtacca ccgccggaat catccccagc aaaatgtgga
    10561 tcagcgttaa acgacctttg ctttctcctt cgtgctgcaa cgggcggcca aagtggatgc
    10621 caatcaggcc aaacagacgc cgccagaaca tcactactac cgccagaatt gatcctaact
    10681 ggatcacaac ttcaaaggtt ttcgccgtgt cgccctcgaa ccccaacaag tgaccgacaa
    10741 taatcatatg gcccgtgctg gataccggca gaaattctgt caatccttcg accacaccca
    10801 atattgccgc tatcagcagc gagtgcatat cgctcatcaa taaaccccta aattattaaa
    10861 atgtaccgct tgtccggact actgcagtaa gaccaggtta taaccgtttg gtttaacagc
    10921 tgtaaaatta attattttct ttcagattat tgccacgctc aatgattaca ccaacattcg
    10981 ccgcccgcgc cactgcgcct ggcttgctga gtttgatgcg cacccacggc gagttgaagc
    11041 gtgctaacag cagctccgcc acctcttcag ccacgcgttc caccagcgca aaacgcgccc
    11101 cctcgacgtg gctgaccacc gtttctgcaa tgtcagcgta actgaggcaa tccgccacat
    11161 catcactttt cgccgcttta cggttatccc atgccatttc gatatcgaac actaacttct
    11221 gttcgatggt ctgttcccag tcgtaaacac caatagtggt gattaccgaa agttgctcta
    11281 taaatacaat atccatcacg tcctgcctgc tttttggcta accggatacc acttccggcg
    11341 aaatgtgcgt attatccaca gattcatcgt tgaacacgaa ttttcaaaac ggaacagctt
    11401 atgagtgcaa tcgcgcctgg aatgatcctc atcgcgtacc tctgcggctc catttccagt
    11461 gccattctgg tttgccgctt gtgtgggctg cccgatccgc gaaccagcgg ctccggcaat
    11521 ccaggcgcaa ccaatgtgtt acgtatcggt ggcaagggag cagccgtagc agtactgatt
    11581 ttcgacgttc tgaaaggaat gttgcccgtc tggggcgcgt atgaattagg tgtcagcccc
    11641 ttctggctag gcttaattgc catcgccgcc tgtcttggac acatctggcc cgttttcttc
    11701 ggatttaaag gaggaaaagg cgttgctacc gcttttggtg ccatcgcacc cattggctgg
    11761 gatctcaccg gagtaatggc gggaacctgg ttactgaccg tgctattgag cggatactcg
    11821 tcgctgggag cgattgtcag tgcactgatt gctccgtttt atgtctggtg gtttaagcca
    11881 caattcacct tcccagtttc gatgctctct tgcctgatcc tgctgcgtca tcatgacaac
    11941 atccagcgtc tgtggcgtcg tcaggagaca aaaatctgga cgaaattcaa aagaaagcgc
    12001 gaaaaggatc ccgagtgatt tctggtggat ctacatgacc tgatagcctt catcgggctt
    12061 gcccagccgt tgctggcacc atgccaccag aaattccacg cagacacgta atttcatgct
    12121 gcgatagagc ggctcccggt aaacagccca gatattggcg ctttgtgcat actccggcaa
    12181 tacttgcacc agtttgccac tctccagaaa cggcaacaca tcccactcgg aacgcagcat
    12241 aatccctttg ccctccagcg cccattgcaa cactatctcg ccgctattgg aggaaagatg
    12301 cccgctaacc ttcaccgatt ttttctcctg accgttcccc aactcccata ttccgtgggt
    12361 catatcgcgc tctttggtca ccagacagtc atgacgactt aattcctgta atgattgtgg
    12421 ctgcggatat ttttgcagat actcaggtgc tgcgcataat attcttttat ttttcgttaa
    12481 cagatgcgca atataataat caggaatttc gtcattaata cgaatatcca gatcaatatt
    12541 atcctgcact aaatcaattt gccgatcgaa caattcaaaa tgcacctgta actcaggata
    12601 attgcgcata agttcggtaa tggctggcgc aatatggctg cgcccaaaac caaaactgca
    12661 accaatacga atcatcccct ccgggcgcgt tttgatttgc gtgacgtcat cgacca
//
LOCUS       DADMIB010000123        12660 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.123, whole genome shotgun sequence.
ACCESSION   DADMIB010000123 DADMIB010000000
VERSION     DADMIB010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12660
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.123"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(16..92)
                     /locus_tag="JNZ89_003156"
     tRNA            complement(16..92)
                     /locus_tag="JNZ89_003156"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(56..58),aa:Met,seq:cat)
     gene            301..1398
                     /gene="mltA"
                     /locus_tag="JNZ89_003157"
     CDS             301..1398
                     /gene="mltA"
                     /locus_tag="JNZ89_003157"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HAY8936942.1"
                     /translation="MKGRWVKYLLMGTVVAMLAACSSKSTDRGQQYKDGKFTQPFSLV
                     NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
                     DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
                     LGDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
                     GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
                     SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
                     PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
     gene            1475..2281
                     /gene="tcdA"
                     /locus_tag="JNZ89_003158"
     CDS             1475..2281
                     /gene="tcdA"
                     /locus_tag="JNZ89_003158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HAY8936943.1"
                     /translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
                     AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV
                     TVVDDFVTPDNVAQYMSAGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
                     PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSIGKLGVDCVFSTEALVYPQSDGT
                     VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
     gene            complement(2332..2775)
                     /gene="csdE"
                     /locus_tag="JNZ89_003159"
     CDS             complement(2332..2775)
                     /gene="csdE"
                     /locus_tag="JNZ89_003159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase sulfur acceptor subunit
                     CsdE"
                     /protein_id="HAY8936944.1"
                     /translation="MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQL
                     PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVLGLLAVLLTAVEGK
                     TAAELQAQSPLALFDELGLRGQLSASRSQGLNALSEAIIAAAKQV"
     gene            complement(2775..3980)
                     /gene="csdA"
                     /locus_tag="JNZ89_003160"
     CDS             complement(2775..3980)
                     /gene="csdA"
                     /locus_tag="JNZ89_003160"
                     /EC_number="3.13.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase CsdA"
                     /protein_id="HAY8936945.1"
                     /translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
                     LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
                     RPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR
                     SRILALSQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF
                     SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNV
                     AGVIGLSAALEWLADYDINQAENWSHSLATLAEDALAKRPGFRSFRCQDSSLLAFDFA
                     GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
                     DRALELLVD"
     gene            4172..4399
                     /locus_tag="JNZ89_003161"
     CDS             4172..4399
                     /locus_tag="JNZ89_003161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417289.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HAY8936946.1"
                     /translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD
                     NDTGMISYKDANGNKQQINRTDVKEMVELDQ"
     gene            4750..5667
                     /locus_tag="JNZ89_003162"
     CDS             4750..5667
                     /locus_tag="JNZ89_003162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HAY8936947.1"
                     /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
                     EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
                     SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
                     YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP
                     IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
                     ELGKIAAFRQWILAKAAAEQEKFRFRYEQ"
     gene            5686..6081
                     /locus_tag="JNZ89_003163"
     CDS             5686..6081
                     /locus_tag="JNZ89_003163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HAY8936948.1"
                     /translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
                     EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
                     PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
     gene            6074..7174
                     /gene="rlmM"
                     /locus_tag="JNZ89_003164"
     CDS             6074..7174
                     /gene="rlmM"
                     /locus_tag="JNZ89_003164"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HAY8936949.1"
                     /translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENSGYVIY
                     ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
                     LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
                     GYSYSNNNSPFYMGIPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
                     GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
                     DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
                     QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
     gene            complement(7218..7949)
                     /gene="fucR"
                     /locus_tag="JNZ89_003165"
     CDS             complement(7218..7949)
                     /gene="fucR"
                     /locus_tag="JNZ89_003165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose operon activator"
                     /protein_id="HAY8936950.1"
                     /translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT
                     QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS
                     STCWYLARQLPDINIQVFTNSHPICYELGKRERIQLISSGGTLERKYGCYVNPSLISQ
                     LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA
                     RIGHLDEVTHIISDERQVATSLVTA"
     gene            complement(8007..8429)
                     /gene="fucU"
                     /locus_tag="JNZ89_003166"
     CDS             complement(8007..8429)
                     /gene="fucU"
                     /locus_tag="JNZ89_003166"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HAY8936951.1"
                     /translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR
                     ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
                     IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP"
     gene            complement(8431..9849)
                     /gene="fucK"
                     /locus_tag="JNZ89_003167"
     CDS             complement(8431..9849)
                     /gene="fucK"
                     /locus_tag="JNZ89_003167"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417283.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HAY8936952.1"
                     /translation="MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENN
                     TWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISW
                     KCPRTAAVMDNIEQLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERTHAWFFI
                     SSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIG
                     TLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGADQNEPVLSSGTWEILIVRSAQVDT
                     SLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAP
                     SADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKA
                     SELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEAR
                     AQIHYQYRYFYPQTEPEFIEEV"
     gene            complement(9846..11591)
                     /gene="fucI"
                     /locus_tag="JNZ89_003168"
     CDS             complement(9846..11591)
                     /gene="fucI"
                     /locus_tag="JNZ89_003168"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000724154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HAY8936953.1"
                     /translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK
                     LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT
                     RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
                     RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
                     QKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG
                     NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV
                     ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN
                     SGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRF
                     LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL
                     TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA
                     WAAHGMDIEVLQERL"
     gene            complement(11624..>12660)
                     /gene="fucP"
                     /locus_tag="JNZ89_003169"
     CDS             complement(11624..>12660)
                     /gene="fucP"
                     /locus_tag="JNZ89_003169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HAY8936954.1"
                     /translation="ITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAA
                     NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQ
                     LSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRL
                     ARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGR
                     FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFS
                     LGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF
                     ARFRSQTATN"
BASE COUNT         3030 a         3167 c         3353 g         3110 t
ORIGIN      
        1 tcatcaaatt ttaattggtt gcgggggccg gatttgaacc gacgaccttc gggttatgag
       61 cccgacgagc taccaggctg ctccaccccg cgtccgtgga tgcgcactat actccgctcg
      121 cgttttcatg caaccttttt tttaccccga tcacggattt agcatgattt tgaacaaaaa
      181 caaaccacta aagcctattt tttgtgcaaa atttgcgtca gggagaggct gctcatttca
      241 ttaaacgcgg cggtttgtta tcttcgttgc gccttatttt ttaacctgaa gaagagaaca
      301 atgaaaggac gttgggtaaa gtaccttctt atgggcacgg ttgtggcaat gcttgccgcc
      361 tgctcttcca aatcaaccga tcgcggacag caatataaag acgggaaatt tacccagcct
      421 ttctctctgg tgaaccagcc agatgccgtt ggcgcgccga ttaacgccgg tgattttgcc
      481 gagcaaatta accatatccg taattcgtca ccgcgtctgt atggcaacca gagtaatgtt
      541 tataacgcgg tgcaagagtg gctgcgcgca ggcggtgata cccgcaatat gcgccagttc
      601 ggcattgatg cctggcagat ggaaggtgcc gacaactatg gtaacgtgca gtttacaggc
      661 tattacacgc cggtaattca ggcgcgccat acccgccagg gcgagttcca gtatcctatt
      721 taccgtatgc cgccaaaacg tggtcgtctg ccgtctcgtg cggagatcta cgcgggggca
      781 ttgggcgata aatacatcct cgcttacagc aactctctga tggataactt cattatggat
      841 gtgcagggta gtgggtatat cgactttggt gatggcagtc cgcttaactt tttcagctat
      901 gcagggaaaa acggtcatgc ctatcgcagc attggtaagg tgctgatcga ccgtggcgaa
      961 gtgaaaaaag aagatatgtc gatgcaggcg attcgtcatt ggggcgaaac acacagtgaa
     1021 gccgaggttc gcgagctgct ggaacagaac ccgtctttcg tcttctttaa accgcaatct
     1081 tttgcaccgg tgaaaggggc aagtgcggtg ccgctggttg gccgtgcttc tgttgcctcc
     1141 gatcgttcaa ttattccgcc aggtactacc ttgctggcag aagtgccgct gctggataat
     1201 aacggcaaat ttaacggtca gtacgaattg cgtctgatgg tggcgctgga tgtcggtggc
     1261 gcaatcaaag gccaacactt cgatatctat caagggatcg ggccggaagc cggacatcgc
     1321 gcaggttggt acaaccacta tggacgtgtc tgggtgctga aaaccgcccc gggcgcaggt
     1381 aacgtcttta gcggctgatg tgttattctg tataccgttt ttacggatac gacagggtga
     1441 gggataacct cacccttttt aattctgagg tgctatgtct gtggtaatta gtgatgcatg
     1501 gcgtcagcgt tttggtggca cagcgcgtct gtatggtgaa aaagcgttgc aactgtttgc
     1561 tgacgcgcat atttgtgtgg ttggtatcgg tggtgtcggt tcctgggcgg cggaagcgct
     1621 ggcgcgcacg gggattggcg caatcacgct tatcgatatg gatgatgtgt gcgtcaccaa
     1681 taccaatcgg caaattcacg ctctgcgcga taacgtcggg ctggcaaaag cggaagtcat
     1741 ggcggagcgc attcgccaga ttaacccgga gtgccgtgta acggtggtgg atgatttcgt
     1801 gacgccggat aacgtagcgc aatatatgag tgccggttat tcgtacgtga ttgatgccat
     1861 tgatagtgta cgacccaaag cggcgctgat tgcttattgt cggcgcaata aaatcccgct
     1921 ggtcacgacc ggtggcgcgg gtgggcagat tgacccgacg cagattcagg ttaccgatct
     1981 ggcgaaaacg attcaggacc cgctggcggc gaagttgcgc gagcgcctga aaagcgattt
     2041 tggcgtagtg aaaaacagta taggtaagct cggcgtggat tgcgtgtttt ctactgaagc
     2101 gctggtgtac ccgcagtcag acggtacggt gtgtgcgatg aaagccacgg cagaagggcc
     2161 gaagcggatg gattgtgcat ctggatttgg cgcggcaacg atggtgaccg ccacctttgg
     2221 gtttgttgcg gtttctcatg cgctgaagaa gatgatggcg aaagcagcgc gtcagggtta
     2281 aacaatcagg tcggatgcga cgcgaacgtc ttatccgacc tggttctgtg cttaaacctg
     2341 cttcgccgca gcgataattg cctcgcttaa cgcattcaac ccctggctgc gtgaggcgct
     2401 aagctgccca cgcaatccca gctcatcaaa caatgccagc ggcgactgtg cctgtaattc
     2461 ggcggcggtt ttcccctcaa cggcagtcaa caacaccgcc aacaggccga gcacaatgcg
     2521 cccttcgctg tcgccaaaga agtgcatttt accgttttca gccacggtat atcccagcca
     2581 gacgcggttt tcgcatccgg caatctcttt agcctgcgct tttaactcgt ctggcaaagc
     2641 cggaagctgt ttccccagca tgatcaactg gcgatattta tcttcccatt gcgtcaacgg
     2701 tgcgaaggta ttgcgtaacg tttctgcggt tacggttgtg ccgaacggat gtccggcgaa
     2761 ttgcgggttt gtcattaatc caccaataat tccagcgcgc ggtcaacggc attcaccagc
     2821 gcatccacat cactctttgt attatatggc gcaaaagagg cgcgcagtgt gccggttacg
     2881 cctaattctg ccagtagcgg ctgagcacaa tgttgcccgg cccgcaaggc aataccgtac
     2941 tccgccagta gcgtcaccat atcgctgtga tgaacgccag caaaatcaaa ggccagcagg
     3001 ctggaatcct ggcagcggaa tgaacgaaag cctggacgtt tcgccagcgc atcttccgcc
     3061 agcgttgcta agctatggct ccagttttcg gcctggttga tatcgtaatc tgccagccat
     3121 tccagcgccg cgcttaatcc tatgacacca gccacatttg gcgttcctgc ttccagtttc
     3181 cacggcgcag attgagtcgt gaagccgtca aaactcactt cgtgaatcat tttgccgcca
     3241 cccagccagg gcgacatcgc ttccagcagt tctgatttgc catacagcac gccgataccc
     3301 gtcgggccat acagtttgtg accagagaaa gcatagaaat cgatatccag ttgctgaaca
     3361 tccgcgggga aatgcaccgc cccctgagca ccatcaacca tcaccaccat ccctgctgaa
     3421 tgagcaaagg taatcgctcg cgccagatcc gggcaaccgc cagtaacgtt cgacatctga
     3481 ctcaacgcca gaatccgact acggggagta atcagttctg gcaacaaatc gacatccggc
     3541 agtcgctgcg cattaagcgg caatttcacc actttggctc cagtttgttg ggcgaccatc
     3601 agccagggga cgaggttggc gtggtgttct gccacgctga caataatctc atcgcccggt
     3661 tgcagacgcg gacgcgcata gcattgtgcc accatgttga tggattcagt ggtgccgcgc
     3721 gtccagacga tagttttatc atccggtgca ttcagtaatt gcgccacttt ctctcgtgca
     3781 gcttcataac gcgcggtcag gcgttgggct tcggcaaact ggctgcgatg gacgtttccg
     3841 gcgctcaggc tgtaaaactg tcgagtggct tcaaccacgg cttcaggttt aagcgcggtc
     3901 gcggcgctgt cgagatagac gcccgcatcc tgtagtgcgg gaaactgggc gcgaaactgc
     3961 gcgggattaa aaacgttcat ggtactcctc ggcttgatgc accgatcgtg acgcaaaatt
     4021 cactttgata caaggagagt gctaaccatc agaattatct ggatatcctg gcgaagccgc
     4081 gtaagtaaca tatgctgaat agtgttaggc gttaatttta gcctgttaat caatactatt
     4141 aagatttatt aatcgcttta aggagaagat gatgaaaaag actgccgcaa ttatttctgc
     4201 ctgtatgctg acttttgccc tgagcgcctg ttccggttcg aactatgtga tgcacaccaa
     4261 tgacggacgt accatcgtct ctgacggcaa accacagact gataacgata ccggtatgat
     4321 ttcgtataaa gacgctaatg gcaacaaaca gcagatcaac cgtactgacg tgaaagagat
     4381 ggtcgaactg gatcagtaat tcgcgatcgc aaggtaaaaa aaagcaccgc aattaggcgg
     4441 tgctacatta atcactatgg acagacaggg taaatgtaca ggaagtgaaa aaaggtagct
     4501 ttgctaccat ggtctgaatc gcagaccaat tgcaaacaca acaacacaac atcacaaccg
     4561 taagccaaaa gttcaccaga acacgcattc cgataaaact tttcgttccg gctcaggaag
     4621 tgccgccact ataggtattt gctggtagaa gctcaacgga caatttataa tggctcagat
     4681 taaaaaaact aataggttac atagtgtgat ctaattgtta aattcattta acatcaaagt
     4741 ttaatagcca tgtctaaacg attaccaccg ctaaatgcct tacgagtttt tgatgccgca
     4801 gcacgccatt taagtttcac tcgcgcagca gaagagcttt ttgtgaccca ggccgcagta
     4861 agtcatcaaa tcaagtctct tgaggatttt ttggggctaa aactgttccg ccgccgtaat
     4921 cgttcactcc tgctgaccga ggaagggcaa agctatttcc tcgatatcaa agagatattt
     4981 tcgcaattaa ccgaagcgac gcgtaaactc caggcccgta gcgccaaggg ggcgttgacg
     5041 gtcagtttac tccccagttt cgccattcat tggttggttc cgcgactttc cagctttaat
     5101 tcagcttatc cgggaattga cgttcgaatc caggcggttg atcgtcagga agataagctg
     5161 gcggatgatg ttgatgtggc gatattttat ggtcggggca actggccggg gctacgggtg
     5221 gaaaaactgt acgccgaata tttattgccg gtgtgttcgc cgctactgct gactggcgaa
     5281 aaacccttga agacaccgga agatctggct aaacatacgt tattacatga tgcttcgcgc
     5341 cgtgactggc agacatatac ccgacagttg gggttaaatc atatcaacgt tcagcaaggg
     5401 ccaattttta gccatagcgc catggtgctg caagcggcta tccacgggca gggagtggcg
     5461 ctggcaaata acgtgatggc gcaatctgaa atcgaggccg gacgtcttgt ttgcccgttt
     5521 aatgatgttc tggtcagtaa aaacgctttt tatctggttt gtcatgacag ccaggcagaa
     5581 ctgggtaaaa tagccgcctt tcgccaatgg atcctggcga aagccgctgc tgaacaagaa
     5641 aaattccgct ttcgttatga acaataattt acgtagggta cgaccatgac cagccgtttt
     5701 atgctgattt tcgccgccat tagcggcttc atttttgtgg ctctgggcgc ttttggcgcg
     5761 catgtgttaa gtaaaaccat gggagccgtt gagatgggct ggatccagac cggcctcgaa
     5821 taccaggcgt ttcatacgct ggcgatctta ggtctggcgg tggcaatgca gcgtcgcatc
     5881 agtatctggt tttactggag tagcgttttc ctcgcgttag gcacggtgtt gttcagcggc
     5941 agcctttatt gcctggcgct gtcccatctg cgtttgtggg cgtttgtcac tccggttggc
     6001 ggcgtgagct tcctcgcggg ctgggcgtta atgttagttg gtgctatccg tttaaagcgc
     6061 aagggcgtaa gtcatgaata aggttgtatt gctgtgccgt ccgggctttg aaaaagagtg
     6121 cgccgcagaa attaccgata aagccggcca gcgggaaatt ttcggttttg cccgcgtgaa
     6181 agagaattcg ggttatgtca tttatgaatg ttatcaacct gatgatggcg ataagttaat
     6241 ccgtgagctg ccgttcagtt cattaatttt tgcccgccag tggtttgtgg tgggggaact
     6301 cctgcagcat ttgccgccag aagatcgtat tacccccatt gtcggcatgt tacagggcgt
     6361 agtagagaag ggcggtgaac tgcgtgttga agttgccgat accaacgaaa gcaaagagtt
     6421 gctgaaattc tgccgtaaat ttactgttcc gctacgcgct gccttgcgcg atgccggggt
     6481 gctggcgaac tatgaaacgc cgaagcgtcc ggttgtgcat gtattcttta ttgcaccagg
     6541 ctgctgctat accggttact catacagcaa caataattcg ccgttctata tgggcattcc
     6601 gcgcctgaaa tttccggcag aggcgccgag tcgttccacg ctcaaactgg aagaggcatt
     6661 tcatgtgttt attcctgcgg atgagtggga tgaacgcctg gcgaacggga tgtgggcggt
     6721 ggatttaggc gcttgccctg gcggctggac ctaccaactg gtgaagcgca acatgtgggt
     6781 ttattccgtc gacaacggcc cgatggcgca aagtctgatg gataccgggc aggtgacgtg
     6841 gctgcgggaa gacggtttca aattccgtcc gacacgcagc aatatctcct ggatggtatg
     6901 cgatatggtt gaaaaaccgg ctaaagttgc ggcattgatg gcgcagtggc tggttaatgg
     6961 ctggtgccgt gaaaccattt tcaatctcaa actgccgatg aaaaaacgct acgaagaagt
     7021 atcacacaat ctggcgtata ttcaggcaca gcttgatgaa catggcataa atgctcagat
     7081 tcaggcgcgg cagttgtatc acgatcgcga agaagtgacg gtgcacgtcc gccgcatctg
     7141 ggctgcggtg ggtggtcgtc gcgacgagcg ataacaggca aggccggggc gtcgtcttcg
     7201 gcctgctacc ctttccgtca ggctgttacc aaagaagttg caacctggcg ctcatcagaa
     7261 ataatgtgcg ttacctcatc cagatgcccg atgcgggctt cccctgaacg attaaattta
     7321 cttttatcaa tcaataacaa cgattgcgcg gcacgtttta atagcatcga tttgtaatca
     7381 gcgttgatcg cattggagtc ccacagtgcg ccgctgctat cgatcccttc acaagaaaaa
     7441 ataaacagat cgatttccag cgatttaagt tgggaaatca gcgagggatt gacgtaacag
     7501 ccatatttgc gctcaagtgt gccgccggaa ctgatcagtt gaatgcgttc gcgtttaccg
     7561 agttcatagc aaatcggatg gctattggtg aagacctgaa tgttgatgtc aggcaactgg
     7621 cgtgccagat accagcaagt tgaactggcg tctaaggcta tcaccatccc ttcttcaatc
     7681 cacgcgagcg cctcgcgcgc gatatctgct ttatgcgcat aatggctttt cagcctgatg
     7741 tgaaagggat cgccactgtc ttgattttga cggtggatat atttagcgcg tccatgattg
     7801 cgcagaattt taccctgcgt ctgtaattca ttgagatcgc gacgaatggt ttctttactg
     7861 acctttagct gttcagagag agcttccgtg gtcaggctgg tatggttcag cagcaggtcg
     7921 actatcgctt gctggcgtgc cgctttcata tttttcaccc catcattcga taaccgcccg
     7981 cgtcatgcgg gcgtaccggt atgagattac ggtgttaccc ctttttttaa aagaatattc
     8041 ccgtacttcg ctcgttcgcc tgtgataacg atcgcaaagg ctttttgcgc ccgttcataa
     8101 aacgcaaaac gattgatgcg gatgatgtca ggacacgggg cttgtagtga aagcgcatta
     8161 cggtaacgtc gttctacttc aggatcgaga gtgtcacctt ctaccgccgc catcatcacc
     8221 agcggcggtg cataactgtc cagttcaaat aacgggataa tcgcctggag caagtcgctc
     8281 accaacaggc catcagcgcg gatcacctgc ggtcccatcg aatgggcggg aaagtgagca
     8341 tcggaaaaaa taatttcatc tccatgtccc atctctgcca gcactttcaa tagttcggga
     8401 gaaattaacg gcgaaattgt tttcagcatt tcacacttcc tctataaatt caggttcagt
     8461 ttgcgggtag aaataacggt actgataatg aatctgtgcg cgggcttctt cagggctgtt
     8521 aaattcccct acgccatacc aaccgaacag cgcagctcct gcgacggtcg tttcggcgtc
     8581 gtcgagaact tttaccggaa tatcaagcat attggcttta atctgattcc acaatgtgtt
     8641 gcgacttcct ccaccgacta acaataattc agaggcctta aagtgcccga ttttttccag
     8701 catctgtaga ttgcgctgta attgcgcagt taacccttcc agcgccgcgc gatagaaatg
     8761 cccccgcgtg gtattaagcg tcactccttg ccagccagcg ttctgacacg acaataaatc
     8821 acactgcatt tttacgccat ccgcgctagg cgcgataaga cgagcttctt caatcaacat
     8881 ttgccagggt gtttcagccg tccagaacag ttttctcacc cattccagca cgccggatgc
     8941 cagccattgc atacctgggt tatacaaccc tgcctggcta tccagttcgc aggtggaacc
     9001 ggcgtactga cttaacagcg aagtatcaac ctgggcgcta cggactatta aaatttccca
     9061 tgtaccggaa gagagcacgg gttcattttg gtcggcacca gcgccaaaaa gggcgaactg
     9121 ggtatcgtga cctgcggaaa tcaccggtat gccaacgggt aagccgagca ttgctgcggc
     9181 gctgttctgt agcgtaccaa tctgttcacc cgcttccacc agacgaggga agagtcggcg
     9241 tggaatacca gtggcttgta aaatttgcgg actgaaatcg cgttgctgga tatccagcat
     9301 ctggctggtt ccggccatcg tgatatcagt agtgaattcg ccggttaaac ggtggttaat
     9361 cagcgacgaa ataaagaacc aggcgtgcgt gcgttccagc agttgtggat gattttcttt
     9421 caaccacacc aacttatata acgtattgaa actaaaggct ccgacgccag aaatagcctg
     9481 caaccgctgt gcggagatca actgttcaat attgtccata accgctgctg ttcgcggaca
     9541 tttccagcta atgatcggat agagcagatt gccttgctta tctaccagag cgccatccac
     9601 accaaaggtg gtgacggcga taccgcggat gtggcattca gtcagttcac tattgatttg
     9661 ccgacagcaa tcagcaaagc gttgcaaaat ggcgtctaaa gaccactggt gccaggtgtt
     9721 gttttccatc gcgatatcgc tggcattagg cgttgaggcg cgggcaacaa tttttccctg
     9781 ccgattaacc gcgatggccc tgacattggt cgcgccacag tcgagtacca ggataacttc
     9841 ttgtttcata atcgctcctg caatacttca atatccatgc cgtgcgcagc ccaggcagaa
     9901 ggacgataca ctttggtctc ttcaacgttg tgcatacata ccgggatacg cagcatggag
     9961 gcgagagtga taaagtcagc gccaacgtgg ccgatggtca gaaccccatg gttagcgccc
    10021 cagttcgcca ttaccgagta cacatccgta aacggccctt taccggtgag gcgcggtgca
    10081 aaccaggtgg ttggccaggt tgagttggtg cgtttgttga ggatgtcatg cacatccttc
    10141 ggcaattcca cgctccagcc ttccgcgatt tgcagtaccg gtcccaggcc tttgatgatg
    10201 ttgacacgag tcatggtgaa cgggacgccg ccttcggtaa ggaagcggga agagtaaccg
    10261 ccgccacgga agtattcgtg gatcgccggg caccattcgg tagcggcgag gcaagcgtca
    10321 gcctcttgct gagagatttc ccagtgcggc ttcatcgtcg ggttaccttc gctgtcgcgt
    10381 tgtttacagg aaccgtccag cgcagcagaa cctgagttga tcaaatggat gatgccgtgt
    10441 tctgccagtc catcgagttt atgccccgtt acacgctcaa ttgcttctgg tgaccagtag
    10501 gtacgcacat cggcaaatac ctgagcggtg ccggtgagct ggtgacccat tagcattgcc
    10561 acgccgttaa gactgtcgtt ttcggtcgcc acgacaaagg gttcgcgcac gccattccag
    10621 tcaaatgaac tgttgaggat cgcttcggcg gtgtcaccat tgggatattg atcggtccag
    10681 tgacgttgcc cctggaagcc cgcagcgatg gcgttgtagc caagtgattc ttccacgcga
    10741 ccaatatcgg ccagtttgct gttgccttgc atcatgtcgc ggatacacat cgccatcagt
    10801 aaactttcgc gcagaactgc gcggctttgc tcggcattgc gttgatactg tttgttattt
    10861 tcatcttcgc catagcggaa gtttttatca gcccaggcca gtgccatttc cagttcggct
    10921 tcgtcgtaaa tcttctgatc gatacggcga cgcagttcgg tcatatccac cgcctggact
    10981 ttcattccca gccaggattc aaagaagttg tgatcaacga tggaaccggc gatacccatc
    11041 gaaacgccgc ccagcgacag atagctttta cctttcatgc tggcgacggc caaaccggcg
    11101 cgggcaaagc gcagcagttt ttcttcaaca tcggcaggaa tcgatgtgtc atcggcatcc
    11161 tgaacgtcat gaccgtaaat ggagaatgcc gggatgcctt tctggctgtg agctgccaga
    11221 gccgctgcca ggtaaacagc gccgggacgt tcagtgccgt taaagcccca aatggctttc
    11281 gggcgggttg gatccatgtc gatggtttca ctgccatagc accagcaagg cgttaccgta
    11341 atggtgaggc ctacattctg gctgctgaat ttttcttcgc aagcagcggc ttcagccata
    11401 cccgcgatac aggtatcgga aatgacacac tcgacggcag ctccgcaggc atggcgcagt
    11461 ttctcggtca gcagtgcggc cgtagctttc gccatattca ttgtttgttc ttcaagcgac
    11521 tcacgaacac ccatgcgacg accgtcaata accgggcgga taccaatttt cggtaagctg
    11581 atttttttca ttacagattc ctcactttat tcggaaaata tgttcagtta gttgccgttt
    11641 gagagcggaa acgggcaaag ataaagatga ccgcgaagca gagtgcgggg atcagttcag
    11701 cagtggggat gttgcccgcc gcgtcactga caaaacccat gaccggagtg acaataccgc
    11761 cgccaataat ggtcataacg atgaaggacg aaccgtattt ggtgtcctgg ccgagattct
    11821 taatgcccag cgagaagatt gttgggtact gaatcgacat aaaggcgctg cataaagtca
    11881 gggctattaa gcccacatga ccgccagcga aggctgagat caggcacagt gccatagcga
    11941 ttaatgcgta ggcggccagg actttgtgtg gtgcgaagcg actgatgagc caggtaccgg
    12001 tgaaacgacc aataaagaag cacaccatgg ttccggttaa atagttagcg gcaaagcctg
    12061 cagtcatacc tggaatttct tctacagcgt agcgaatcaa atagctccag caggccgttt
    12121 gtgcgccaac gtagcagaat tgcgctaata ctgcccagcg ccagtggcga atacgcgcca
    12181 ggcgagaaag cgatgcggag aacgatcctt gtttggcgtc actgtgatta tcactctgca
    12241 atgccgggaa tttcgtcagc atgatcagca gggcgaccag taacacgata gccacgatga
    12301 tcatataagg tgtctgtacc gataatacca ggctgtgttt atacgcactc aattgctctg
    12361 gagacatttt atcgagaacg tcttgcgatt gatgtggcac gttagacaaa ataagacttt
    12421 gcccaaagac aaccgcgata attgcgccaa acgagttaaa tgtttgcgca agatttaagc
    12481 ggaagtgacc actgctttcc ggccctaata ccgtaacaaa agggtttgcg gcagtttcca
    12541 gacaacctaa tccggctgca ataataaata ggccaactaa aaataaggtg tagttcatta
    12601 tttctgcagc gggccagaat aatgcagcgc ccagggcata taaaaataac ccagtaataa
//
LOCUS       DADMIB010000124        12658 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.124, whole genome shotgun sequence.
ACCESSION   DADMIB010000124 DADMIB010000000
VERSION     DADMIB010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12658
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.124"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(4..324)
                     /gene="chbB"
                     /locus_tag="JNZ89_003170"
     CDS             complement(4..324)
                     /gene="chbB"
                     /locus_tag="JNZ89_003170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIB"
                     /protein_id="HAY8936955.1"
                     /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA
                     GEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK
                     AAAN"
     gene            complement(622..960)
                     /gene="osmE"
                     /locus_tag="JNZ89_003171"
     CDS             complement(622..960)
                     /gene="osmE"
                     /locus_tag="JNZ89_003171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmE"
                     /protein_id="HAY8936956.1"
                     /translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS
                     RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
                     EYDTDPQAAK"
     gene            1162..1989
                     /gene="nadE"
                     /locus_tag="JNZ89_003172"
     CDS             1162..1989
                     /gene="nadE"
                     /locus_tag="JNZ89_003172"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HAY8936957.1"
                     /translation="MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLV
                     LGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ
                     PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT
                     DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDR
                     PSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK"
     gene            2219..3106
                     /gene="cho"
                     /locus_tag="JNZ89_003173"
     CDS             2219..3106
                     /gene="cho"
                     /locus_tag="JNZ89_003173"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease Cho"
                     /protein_id="HAY8936958.1"
                     /translation="MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGES
                     DTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQ
                     QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIA
                     DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW
                     PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEDATTLIRTPAGFDHDGYKILCKPL
                     LSGNYEITELDPANDQRAS"
     gene            complement(3066..3641)
                     /gene="ves"
                     /locus_tag="JNZ89_003174"
     CDS             complement(3066..3641)
                     /gene="ves"
                     /locus_tag="JNZ89_003174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="environmental stress-induced protein Ves"
                     /protein_id="HAY8936959.1"
                     /translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA
                     ANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTEGQM
                     SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFD
                     GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ"
     gene            complement(3844..4314)
                     /gene="spy"
                     /locus_tag="JNZ89_003175"
     CDS             complement(3844..4314)
                     /gene="spy"
                     /locus_tag="JNZ89_003175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-independent periplasmic protein-refolding
                     chaperone"
                     /protein_id="HAY8936960.1"
                     /translation="MRKLTALFVASTLALGAANLAHAAAPADAKPMMHHKGKFGPHQD
                     MMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIVSDTFDKAKAEAQIAK
                     MEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE"
     gene            complement(4644..5612)
                     /gene="astE"
                     /locus_tag="JNZ89_003176"
     CDS             complement(4644..5612)
                     /gene="astE"
                     /locus_tag="JNZ89_003176"
                     /EC_number="3.5.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase"
                     /protein_id="HAY8936961.1"
                     /translation="MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQG
                     ALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDM
                     NRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGV
                     LPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFG
                     QNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFM
                     PFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS"
     gene            complement(5605..6948)
                     /gene="astB"
                     /locus_tag="JNZ89_003177"
     CDS             complement(5605..6948)
                     /gene="astB"
                     /locus_tag="JNZ89_003177"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HAY8936962.1"
                     /translation="MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAAKQ
                     GLLKMKTLADAGFPQAVIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSS
                     ASPMWVANAATIAPSADTLDGKVHLTVANLNNKFHRSLEAPVTESLLKAIFNDEEKFS
                     VHSALPQVALLGDEGAANHNRLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREAS
                     EAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLAN
                     LRARVNGFMAIEVPATQVSVSDAVSTYLFNSQLLSRDDGSMMLVLPQECREHAGVWGY
                     LNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFN
                     ALNDWVDRYYRDRLTAADLADPQLLREGREALDVLSQLLNLGSVYPFQREGGGNG"
     gene            complement(6945..8423)
                     /gene="astD"
                     /locus_tag="JNZ89_003178"
     CDS             complement(6945..8423)
                     /gene="astD"
                     /locus_tag="JNZ89_003178"
                     /EC_number="1.2.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
                     /protein_id="HAY8936963.1"
                     /translation="MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVEQACR
                     AARAAFPRWARLSLAERQVVVERFAGLLESNKAELTAIIARETGKLRWEAATEVTAMI
                     NKIAISIKAYHVRTGEQRSEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALL
                     AGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLF
                     TGRANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQR
                     CTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAW
                     QQLEAMGGRTLLAPRLLQLETSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDSFEEA
                     ILMANNTRFGLSCGLVSPEREKFDQLLLEARAGIVNWNKPLTGAASTAPFGGIGASGN
                     HRPSAWYAADYCAWPMASLESDSLTLPATLNPGLDFSDEVVR"
     gene            complement(8420..9454)
                     /gene="astA"
                     /locus_tag="JNZ89_003179"
     CDS             complement(8420..9454)
                     /gene="astA"
                     /locus_tag="JNZ89_003179"
                     /EC_number="2.3.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HAY8936964.1"
                     /translation="MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAI
                     KTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWHNYRVGTLVHASKELN
                     VYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV
                     AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS
                     QEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVE
                     VAEGQPAQGDFPACLVANENYHHFRVVLARTDPATERLILTAAQLDALKCHAGDRVRL
                     VRLCAVEKTA"
     gene            complement(9451..10671)
                     /gene="astC"
                     /locus_tag="JNZ89_003180"
     CDS             complement(9451..10671)
                     /gene="astC"
                     /locus_tag="JNZ89_003180"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylornithine/acetylornithine transaminase"
                     /protein_id="HAY8936965.1"
                     /translation="MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDF
                     AGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFC
                     NSGAEANEAALKLARKFAHDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAP
                     LPPDIRHAAYNDINSASALIDDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNA
                     LLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGDFPVGALLTTEECASVMTVG
                     THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRG
                     LGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDR
                     FAAACEHFVSRGSS"
     gene            11117..11923
                     /gene="xthA"
                     /locus_tag="JNZ89_003181"
     CDS             11117..11923
                     /gene="xthA"
                     /locus_tag="JNZ89_003181"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HAY8936966.1"
                     /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL
                     EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGN
                     VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLD
                     IGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSK
                     GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR"
     gene            12090..>12658
                     /locus_tag="JNZ89_003182"
     CDS             12090..>12658
                     /locus_tag="JNZ89_003182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY8936967.1"
                     /translation="MNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSG
                     LFGYSLYILLFIIATLFLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARW
                     LGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWP
                     YTLISALTTLPGIVIYTVMASDLANEGITL"
BASE COUNT         3076 a         3426 c         3098 g         3058 t
ORIGIN      
        1 aaattaattt gctgcggctt ttttaatcgc tgcaaccgca gccttaagca cgcctaaacc
       61 atcgactttg ccataaagca gcgagtcaat tacttcaacc ggtttgttgg gtaacaaacg
      121 ctggatttcg ggcaacatat aagcaatctg cggccctaat aacacgacat cggcattctg
      181 acctttttca ccagccagtg tttccggaaa tgcttcaata atgaccggaa cttcatattt
      241 ttctgcctgt gcgcgcattt ttgataccag taaagaggta gacatgcccg cagaacaaaa
      301 cagataaatg tgtttctttt ccataaaact gccctcatcg acgattatct gtcagccaga
      361 cactccgcaa gccttaacct gcttccatgc tctgggtaac ttgcgaaacc aacatgactt
      421 tttttgtggc tgaaaggagt atacggtata gacctgagca atagtatttc tttgacctta
      481 taaattgtct ctccttgacc tgcggttatg accctcttca catttcgggc aaataattcg
      541 cgaagataat taagaactca ggccaaaaaa accggcgcaa tggccggttt ccgttgttac
      601 tcaagctttc aaacgaagtg attacttcgc agcctgtgga tcagtgtcgt attcagcaca
      661 ggtctgataa ccggagttga tgacatgtcc ggtatcatct aacgcgacaa agtaggtttc
      721 tgctttacca tcacgttgac ccaggatgta ggtctggcaa gtaccacgag catggatcat
      781 gctcacttca gacgaaggtt tacccgcaat ttgtgcaacc tgcgcccggc tcatgccttt
      841 tttgacgtct ttcaccacag gctgtacaaa ctggtctttg gtacgatcat aagccgtaca
      901 acccgccagc atggttaata ccgccgctgc actcagaatt cctgccatat tcttgttcat
      961 attccgtcct cttgtttatc agcgtgttag ataagcctgg aatacattgg gcgctttttc
     1021 aagcccgtga acgaaacggc tccgctttca gaggattcct gtatgacgtt ttatccacca
     1081 ttcaacccgc tgtcgcttgt cgtttcagta gcgacgggtt agctttaagg aagttttgtc
     1141 ttttctgtct ggaggggttc aatgacattg caacaacaaa taataaaggc gctgggcgca
     1201 aaaccgcaga ttaatgctga agaggaaatt cgtcgtagtg tcgattttct gaaaagctac
     1261 ctgcaaactt atccgttcat taaatcactg gtgctcggga tcagcggcgg tcaggactcc
     1321 acgcttgccg gtaagctgtg ccagatggcg attaatgagc tgcgccagga gaccggcaac
     1381 gaatcactgc aatttattgc cgtacgcctg ccctatggtg ttcaggccga cgaacaagat
     1441 tgccaggatg ccattgcctt tattcaaccg gatcgcgtat taaccgttaa tatcaagggc
     1501 gcggtattgg ccagcgaaca ggcgctgcgc gaagcgggca ttgaactgag cgattttgtc
     1561 cgtggcaatg aaaaagcgcg tgagcggatg aaagcacaat atagcattgc gggtatgacc
     1621 agcggtgtcg tggtgggcac cgatcatgca gcagaagcta ttaccggatt cttcactaaa
     1681 tatggtgacg gcggtacgga cattaatccg ctgtatcgtc tcaacaaacg tcagggtaaa
     1741 cagttactgg cggcattagc ttgcccggaa cacctttata agaaagcgcc aacggccgat
     1801 ctggaagatg atcgcccttc tctgccagat gaagtggcac tcggcgtgac ctatgacaat
     1861 atcgacgact atctggaagg gaaaaacgta cctcaacagg tcgccagaac aatagagaac
     1921 tggtatctga aaaccgaaca taaacgccgt ccgccaatta ccgttttcga tgatttctgg
     1981 aaaaagtaat aatttgcaca tattggattg tgcgaaaaag agtaatttgt tcacgccgga
     2041 tgcggcgtga acgccttatt cgacctataa aactatgcaa attcaataca ttgcaggagt
     2101 cgaataggcc tgacaggcgt agcacgtcag acggtgtaac ctttgtcatc gacccgcctc
     2161 ttttttaatc gcttcccgcc tgttacactg gatagataac cagcattcgg agtcaacagt
     2221 ggtacggcgt ttaacttctc cgcggctcga atttgaagct gcggcaattt atgaatatcc
     2281 cgaacattta cgttcattcc ttaatgactt acccacccga ccaggggtgt atctgtttca
     2341 tggtgaaagt gacaccatgc cgctctatat cggcaaaagc gttaacatcc gcagccgcgt
     2401 cctttctcat ttacgtaccc cggatgaagc cgccatgcta cggcaatccc gacggatcag
     2461 ctggatatgt accgccggtg aaatcggcgc tctgctcctt gaagcgcgat taatcaaaga
     2521 acaacagccg ctgtttaata aacggttgcg ccgcaatcgt cagctctgtg ccctgcaatt
     2581 aaatgaaaag cgcgtcgatg tggtgtatgc caaagaggtg gatttttcac gagcccccaa
     2641 cctgtttggc ctgtttgcca ataggcgcgc agctttgcaa gcattgcaga ccatcgctga
     2701 tgaacaaaaa ctttgttatg gcctgctggg actggaaccg ttaagtcgcg gtcgtgcatg
     2761 ttttcgttca gcgctaaaac gttgcgccgg agcatgctgc ggtaaagaga gccatgagga
     2821 acatgcgcta cgcttgcgcc agtctctgga gcgtttgcgg gtggtgtgtt ggccttggca
     2881 aggggcggtg gcgctgaaag aacagcaccc ggaaatgact caatatcata ttattcaaaa
     2941 ctggctgtgg ctgggggcgg ttaattcgct ggaagacgcg acaacgttaa ttcggacacc
     3001 cgccgggttt gatcacgacg gttataaaat tctttgtaag ccgctgcttt ccggtaacta
     3061 tgaaattact gaacttgatc cggcgaatga ccagcgagcc agttgatttc actgaacaac
     3121 agtttacctt gcggttgtaa aagccgcagg gtgtgcctgc catcgaacca gcacgcgccc
     3181 tggtcggtag tgagcaattt atcgcccagt tgccacgccc cgttaatcac aaacaccacc
     3241 ccgccgcgtg agccaaaggt agtaaacgta cgttcggcaa ttctgacttt cgccttacag
     3301 acatccaggc gtgtcatgat gttgaaatcc atcgacatct gcccttccgt cagtttcgct
     3361 tttaccacct ggtccgctgc aaaggcaaaa ggctgtaacg gttttaaggt atggttaaag
     3421 cggtctgcgc tttcaaggag catctcgccg ccttccagca acgtcactat cctttccatg
     3481 ccgggaaaca aagaaaactc cccattcgcc gcgatggatg caatgctggc acgccagtaa
     3541 aaatcacgtt ttgccggtgg gaaagtgcaa atttcgcgcg tttcaccggc agcatttcgc
     3601 cacagattca ccgacatttt acgcatatca aagtattcca tactcgctcc cggcccgttc
     3661 ttttcattgt tatcgttcag gtaaccgtgg atggttatcg gcaactcggg tgatttacgt
     3721 tagtggtgat caggcttttt ttacaactgt ttgagaagag aaaagaaaac cgccgatcct
     3781 gtccaccgca ttactgcaag gtagtggaca agaccggcgg tcttaagttt tttggctgaa
     3841 agattattca gcagttgcag gcattttacc ttttgccgct ggacgttctg tcagacgctt
     3901 ctcaaaatta gcattaaatt gctttttctg ttccggcgtc aggatgttgt aaattttgtt
     3961 ctgggtttcc atgtgcgcca gcatgttagc tttgcgctgt tcttccattt ttgcgatctg
     4021 cgcttcagct tttgctttat cgaaggtatc gctgacaatg atgtcatgca ttgcgcggcg
     4081 ttcttccagc ggcggacgtt tcatctggtc acgctggcct ttcatgattt cgcggatctg
     4141 ctgtttctgc gcgtcggtca ggttcaggtc tttgaacatc atgtcctgat gcggaccgaa
     4201 cttgcctttg tggtgcatca tcggcttcgc gtcagccggt gctgcggcat gggccaggtt
     4261 agccgcgcca agagccaggg tagaggcaac aaacagtgca gttaatttac gcatattcta
     4321 tatccttcct ttcagttatt tattacggct ttcttaagta gcgtgccgtg ttgacaagat
     4381 taactttact gactttagcg tcaattaatc agagcaacgg taaaacaatg aaagtgtaaa
     4441 aaacactttt gcgccaatta tggagaaaaa aagaaaattt gatggagagt gatgagagaa
     4501 tattacaaca caatgatttt gcagagatta tgaagaacta tactggatga ctggtgataa
     4561 ataaagcaaa taaccaggat taatctgtat taatttataa gaaagcaact taatacccgc
     4621 agaatgattt ctgcgggtaa gtattagctt attttttcga gcattaatcc cgcgcgtaat
     4681 cccaacgcta ccaacggatt agggaataac acatactcta catcatgggt tacggtaaaa
     4741 cgttcctctc cgtcctgcgc cagcaatgtt cctttctcaa acggcataaa attcagcgtg
     4801 tcacttgcca tatgcatttc gaaggacggc gagtgacgag taatttgcga aaccacccga
     4861 taacggagcg gcggtgttct cacgataccg acactctcac cagatagcag cgcagcaatt
     4921 gcgctggcag ttactgcaaa ctggcgaaga tcgttttgcc caaagggcaa cgctttgcca
     4981 agttccagcg tacaggccag cgcgccaaaa tgtctggcgc tgaaatgggt aaacgtacca
     5041 ccaggttcct gatggaacac cagcgcctcc agccccgccg cacccagcca cgtcagaaat
     5101 ttctcgtccc agggaatgtc gcgttgcggt aatacaccga actgcggatg caaggagcca
     5161 cgaattgcgg tatgtagatc aaggtgccag cgcacagatt ctttgccctg gtcataaaaa
     5221 tcttccaggc actgttccag ttcgcgcgcc cgacaggttt ctccgctttc agcaaatagc
     5281 tgccaacgac cgccaaacat tcgattcata tcgctatggc aataacgttt cccttgcttc
     5341 agcgcaggag gattcccgag gatcaccagc aaccgccaac gtaacgggat ctcgccgtga
     5401 gatatcgcgc caagcaacgc gtccagcatt tccacaggtg ccgtctcatt accgtggatc
     5461 cccgcagaaa tcaccagcgc gccttgcggt ggcgttaatg gcgtcagttc cagcacacca
     5521 tcgcccagcc agcgccagcg aacgccgttg atttctcgct cggtgataac cggtttttta
     5581 cccgttaagg tcagagcaag aaaattatcc attgccccct ccctcgcgct ggaacggata
     5641 aaccgaaccg agattcagta attggctcaa tacatccagt gcttcccgcc cttcgcgcag
     5701 caattgcggg tcggccagat cggcagcagt aagacgatcg cggtagtaac gatccaccca
     5761 gtcattgagc gcattaaaca aggtatcgtt catcatcacc gccggattca ccgcccggcg
     5821 ttcttcttct gtcaatacca cccgcaaccg caggcacgcc gggccgccgc cattcgccat
     5881 gctttcacgt aagtcaaaga cttttagttc gctaatcggg ttgtcagcgg caaggagttc
     5941 attgagataa ccccatactc cggcgtgttc ccgacactcc tgaggcagca ccaacatcat
     6001 ggaaccatca tcgcggctca acagttggct gttaaacaga taggtagaca ccgcatccga
     6061 cacggaaacc tgagttgccg gaacttctat cgccataaaa ccgttcaccc gcgcccgcag
     6121 gtttgccagt aactgtgact ggcgagcgaa cgcctgttgg tggcaaaaca gcacctggcg
     6181 gttacttacg gcaatcacgt cattatgaaa aacaccctgg tcgataacgt ccgggttttg
     6241 ctgggcgaaa atcacctgtt ggggattcac ctgattaagc cttgccaccg cctcgctggc
     6301 ttcgcgagtc tgtcgcgccg gataacggga aggccgggta tcattgcctt cttctcgccc
     6361 gtagacaaaa agttgcatac ccggctcacc gtaatgaccg ccgagacgat tgtggtttgc
     6421 cgccccctca tcaccgagca acgctacctg cggcaacgcc gaatggacgc taaatttctc
     6481 ttcgtcgtta aaaatagctt ttaacagcga ttcagtgacg ggcgcttcca gcgaacggtg
     6541 aaatttattg ttcaggttgg caacggtgag atgcactttg ccatccagcg tatcggcaga
     6601 tggcgcgatc gttgccgcat tggctaccca cattggcgaa gcggagctga cgctggaaag
     6661 ccagtgcggt gcctggcgtg caactttttc cagtacctgc tcatcgctac cactgaatcc
     6721 caactgacgc agcaccggaa taaacggacg ctcgtgcggc gggatcacgg cctgggggaa
     6781 tcctgcatcg gcaagggttt tcattttcag taagccctgt ttcgccgcca gtcgcgggtt
     6841 agacacctga aaacggtgac gggtagaggc ttcattacca aacgacaggc cagcgtaatg
     6901 atgcgtcagc cctaccagcc cgtcgaaatt aacttcccag gcgttcatcg caccacctca
     6961 tcggaaaaat ccagcccggg gttaagcgtt gcgggcaaag ttaacgagtc cgactccagg
     7021 ctcgccatag gccatgcgca gtaatctgcg gcataccagg cgctggggcg atggttaccg
     7081 gatgcaccaa tgccgccgaa tggcgcggta ctggcagcac cagtaagcgg tttgttccag
     7141 ttaacaatcc ccgcccgcgc ctccagcaac agttgatcga atttttcccg ttcgggggaa
     7201 accagaccgc aagagagtcc gaagcgagtg ttattcgcca ttagaatcgc ttcctcgaaa
     7261 gaatcataac gccagacgcg caataacggt ccgaacacct cttcatctgg tacgccagca
     7321 acgcctgtca tttcaatgat ccccggcgtc agcaacgatg tctctaattg taataagcgc
     7381 ggcgcaagca gggttcgtcc gcccatcgct tccagttgct gccaggcagt aaccacctgc
     7441 tgtgcggcct gttcagaaat cagcccgcca ataaacggct gcggttcgtc atcccagttg
     7501 cccggcgtta atcgctggct gacggcaacc agacgagcaa gaaacgcatc gccctgcgct
     7561 ccgcttttga gcaataaacg gcgggcgcag gtgcagcgtt gcccggctgt gacaaacgcc
     7621 gactgaatgg tcagatggac agccgcgtcg atatccgcca cctcatcgat aattagcgga
     7681 ttattaccgc ccatctcaag ggcgagaatt ttctccggct gaccggagag ctggcgatgc
     7741 agctggtagc cggtattggc gcgaccggta aacagcaaac cgtcgagatc ctccagcgca
     7801 ctcagcgcct gacccgtttc acgcccgccc tgcaccaggt tcagcacgcc cggcggcaag
     7861 ccagcctgct gccataaacg cattaccgct tcgccactcc acggtgtcag ttcgctgggt
     7921 ttaaagataa tggtgttacc tgccagcaat gccggaacga tatgtccgtt cggcaaatga
     7981 ccagggaaat tatacggccc aaacaccgcc agcacgccgt gcgggcgatg tcgcaggctc
     8041 gccgcaccgt ccggcatttc actacgctgc tcgccggtac gaacgtgata cgccttaatt
     8101 gatatcgcga ttttattgat catcgccgtc acttcggttg ccgcttccca gcgcagctta
     8161 cccgtttctc tggcaataat cgcggttaat tcggctttat tgctttccag caatccggca
     8221 aagcgttcga caacgacctg acgttcagcc aatgagagcc gcgcccagcg cggaaacgcc
     8281 gcacgggctg cccgacaagc ctgttcgacc tgagcggcat cggcatcatt gccttgccat
     8341 aacacctcgc ccgataccgg attacgcttc acacgcgatg cgccctggcc cgttatccag
     8401 tcaccgttaa tccataaagt catgctgttt tctccactgc gcacaggcgc accagacgaa
     8461 cgcgatcccc tgcgtggcat ttgagggcat ccagttgtgc ggcggttaaa atcaaacgct
     8521 cggttgccgg atcggtacgc gccagcacca cgcggaaatg gtgataattt tcattggcga
     8581 ccaggcaggc cggaaaatcg ccctgcgcag gctgcccttc tgccacttcc accagccgac
     8641 ttttacggat ggcgcgcacg cggtcgatgt cacactcaag cgttggcccg ccgtcgaaga
     8701 tgtcgatata gttgcggtaa cgaaaacctt ctttctccag caccgcgcgg gcaggcgcgg
     8761 tttgcggatg tacctgaccg atgacgtcct gggcttcctg ggataaaaag tgggtataga
     8821 tcggatgttt cggcatcagt tctgcaataa atgccttttg cccggtgccg cagagaaaat
     8881 cggcgcggct aaaatccatc gaaaagaagc gtttaccgag gctttgccag aacggtgaat
     8941 agccgtgttc gtcaatcacc ccgcgcattt cagcaaccac tttgtcatta aacttgtcgc
     9001 gaaaagccgc cataaacata aagcgcgatt tcgacagcaa atagccgttg ccctctttgc
     9061 gccagtccgg gtcgagaaac agcgtgcaca gctcgctgct gccggtgtga tcgttactaa
     9121 gaaacagcgt cggcaatgcg ttatagacat tcagctcttt tgaggcgtga accaacgtgc
     9181 cgacccgata gttgtgccag ggatcgttca gcccaaccgc cacctcaatg gcgcaaatcc
     9241 ccgccacggt gcctgtctcg ctatcttcca gcacgaacac atagccctgc tcgcttttgg
     9301 gcagttcgcc ttgccaggtt ttgattgccc tttcgatacg cgcggaaagc gtggcttcat
     9361 tagcgggaag cgacgtcagg ccgccgcccg ttttgctggc aagctgcatc agcgccgaga
     9421 catctgagcg ctcaacggga cggatgacca tcatgatgaa cctcggctaa caaaatgttc
     9481 gcaagcagct gcaaagcgat ccagtccggt cgtcacctct tcttcgctga cattgagcgc
     9541 aggcgcaaaa cgcaccacgt tgccacccgc aatcagtacc ataacgcctg ctttcgccgc
     9601 ctcctgagag atctgtttcg cttgtccggc gtaatcggca ttcagtacac agccaatcaa
     9661 caaacctaag ccgcgaactt cactgaacaa accgtagcgg tgattaatgg tattaagacg
     9721 ctcaacaaac cagtcgtgac gctgtttaac gccattaagc atctctggtg tgttgatgag
     9781 ctccagcact ttgcccgcca ccgccgaggc cagcggattg ccgccatagg tggtgccatg
     9841 agtgccaacg gtcatcacgc tggcgcactc ttcggttgtt aacaacgcac cgaccgggaa
     9901 atcgccgccc agcgctttgg cggtagttaa cagatcaggt gtcacgccgt agtgcatata
     9961 ggcatacagt tccccggtgc gcccgacgcc ggtttgtact tcatcaaaaa tcaacagcgc
    10021 attgtggcgg tcacacaatt cacgcagacc ttgtaaaaac gcgttgctgg ctggcaccac
    10081 accgccttcc ccctggatgg gttcgacaat caccgcacag gtggcgtcgt caatcagcgc
    10141 gctggcagag ttaatatcgt tatatgcagc atgacggata tctggtggca gtggcgcaaa
    10201 atcctgtgaa taggctggct gcccacccgc actgacagta aacagcgtgc gaccatgaaa
    10261 cgcattttta aacgccatga taccgctctt atggctgccg tagcggtcgt gagcgaattt
    10321 acgcgccagt tttagcgccg cttcgttggc ttccgcaccg gagttacaaa agaagacgcg
    10381 atcggcaaac gtggcgtcga tcaatttttt cgccagtcgc agtaccggct cgttggtgta
    10441 accgttgccg gtatgccaga acttactcgc ctgttcgttc agcgcttcac gcagttccgg
    10501 atgcgcatgg cccagcgcgt tcaccgcaat gccacccgcg aagtcgatat actctttccc
    10561 ctgctgatcc cacaagcgcg aaccttcgcc acgtaccggt ataaagggtg ccggagcgta
    10621 aacaggtatc atccattcat caaagttttc acgcgtaatt ggctgagaca tagcgacctc
    10681 tacagtaaat aattcgttat ttatatgtta acaataagta atgtttgcgc tgtaaatgta
    10741 gattgcaggg ttcgtgccag ccagtgataa aagtgcataa acggcggagg ctaactggaa
    10801 atcaaggagt tataaccaaa ccatatgcat ttaaagtgca tataaagtga atacgtttgc
    10861 gatgtgggtg aataaaaaga ataaaaaacg caatgttatg cagaagtaaa atataattct
    10921 ggaattgtga tcattgacga aatttactgg aaattactgc gccattctga cgcagcgcgc
    10981 accaaaagcg ggcatttttt gcgccatcgt tgacatcatt aacaaccatc gatcaaatca
    11041 cttaacaaca ggcggtaagc aacgcgaaat tctgctacca tccacgcact ctttatctga
    11101 ataaatggca gcgactatga aatttgtctc ttttaatatc aacggcctgc gcgccagacc
    11161 tcaccagctt gaagccatcg tcgaaaagca ccaaccggat gtgattggcc tgcaggagac
    11221 aaaagttcat gacgatatgt ttccgctcga agaggtggcg aagctcggct acaacgtgtt
    11281 ttatcacggg cagaaaggcc attatggcgt ggcgctgctg accaaagaga cgccgattgc
    11341 cgtgcgtcgc ggctttcccg gtgacgacga agaggcgcag cggcggatta ttatggcgga
    11401 aatcccctca ctgctgggta atgtcaccgt gatcaacggt tacttcccgc agggtgaaag
    11461 ccgcgaccat ccgataaaat tcccggcaaa agcgcagttt tatcagaatc tgcaaaacta
    11521 cctggaaacc gaactcaaac gtgataatcc ggtactgatt atgggcgata tgaatatcag
    11581 ccctacagat ctggatatcg gcattggcga agaaaaccgt aagcgctggc tgcgtaccgg
    11641 taaatgctct ttcctgccgg aagagcgcga atggatggac aggctgatga gctgggggtt
    11701 ggtcgatacc ttccgccatg ctaatccgca aacagcagat cgtttctcat ggtttgatta
    11761 ccgctcaaaa ggttttgacg ataaccgtgg tctgcgcatc gacctgctgc tcgccagcca
    11821 accgctggca gaatgttgcg tagaaaccgg catcgactat gaaattcgca gcatggaaaa
    11881 accgtccgat cacgcccccg tctgggcgac cttccgccgc taatttagca gctctcctgg
    11941 ctcaaactgg gtcaggagaa ttaaccttga gaaaaatcaa caaactgtca gtaatgattt
    12001 gttgcctgcc gtcctttgtt ataccgtcac tgcgttttta gttgtctgac cacttctcta
    12061 ttatcaagtt tgatatagga aactccacga tgaatgctga gcgtaaattt cttttcgcct
    12121 gtcttatttt tgcgctggtc atttacgcta tccacgcttt cggtttattc gatctgctca
    12181 ccgatttacc ccacttacag acactcattc gccagagcgg attgttcggt tatagcctct
    12241 atattctgtt attcatcatt gccaccctct ttctgttacc aggaagcata ctggtgatcg
    12301 ctggaggaat agtttttggc ccgctcttag ggacactact ctcattaatt gccgccacgc
    12361 tggcctcctc gtgctcattc ctgctggcgc ggtggctggg acgtgattta ctgctgaaat
    12421 acgtgggcca tagccatacc ttccaggcca ttgaaaaagg cattgcgcgt aacggtattg
    12481 attttcttat tctgacccgc ttaatcccgt tgtttcctta caatattcaa aattacgctt
    12541 acggattaac caccatcgcc ttctggcctt atacccttat ttcggcactc acgaccctgc
    12601 ccggtattgt tatttatacc gtgatggcaa gcgatctcgc caatgaaggc attacgct
//
LOCUS       DADMIB010000125        12602 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.125, whole genome shotgun sequence.
ACCESSION   DADMIB010000125 DADMIB010000000
VERSION     DADMIB010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12602
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.125"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(14..520)
                     /gene="mug"
                     /locus_tag="JNZ89_003183"
     CDS             complement(14..520)
                     /gene="mug"
                     /locus_tag="JNZ89_003183"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HAY8936968.1"
                     /translation="MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQA
                     GFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQ
                     ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD
                     QALVVRGR"
     gene            645..720
                     /locus_tag="JNZ89_003184"
     tRNA            645..720
                     /locus_tag="JNZ89_003184"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:678..680,aa:Ile,seq:cat)
     gene            complement(774..1538)
                     /gene="nfeF"
                     /locus_tag="JNZ89_003185"
     CDS             complement(774..1538)
                     /gene="nfeF"
                     /locus_tag="JNZ89_003185"
                     /EC_number="1.16.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent ferric chelate reductase"
                     /protein_id="HAY8936969.1"
                     /translation="MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDG
                     FTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAID
                     FFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
                     LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYF
                     IWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK"
     gene            1826..2449
                     /locus_tag="JNZ89_003186"
     CDS             1826..2449
                     /locus_tag="JNZ89_003186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HAY8936970.1"
                     /translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCG
                     GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP
                     TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
                     NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD"
     gene            complement(2603..4123)
                     /locus_tag="JNZ89_003187"
     CDS             complement(2603..4123)
                     /locus_tag="JNZ89_003187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY8936971.1"
                     /translation="MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFT
                     LQELQGQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPM
                     VREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLP
                     LRWRARGVMTLMFILLAAMLWFVAAPVVTYFLCVLVVLLASACFEWQIVRPIENVARQ
                     ALKVATGERNSVEHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAK
                     GTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSIIASNAAVQGGEAM
                     TTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
                     VRHLASRSANAANDIRKLIDVSADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
                     HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH"
     gene            4429..5919
                     /gene="ygjG"
                     /locus_tag="JNZ89_003188"
     CDS             4429..5919
                     /gene="ygjG"
                     /locus_tag="JNZ89_003188"
                     /EC_number="2.6.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine aminotransferase"
                     /protein_id="HAY8936972.1"
                     /translation="MITTFVFIPIFAIAAGVAQSLQYLNRYHVIREPPEHILNRLPSS
                     ASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGA
                     VEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLD
                     PLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFH
                     GKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEP
                     IQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILC
                     LAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNL
                     LAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRV
                     LVAGTLNNAKTIRIEPPLTLTIEQSELVIKAARKALAAMRVSVEEA"
     gene            complement(5961..6293)
                     /locus_tag="JNZ89_003189"
     CDS             complement(5961..6293)
                     /locus_tag="JNZ89_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HAY8936973.1"
                     /translation="METVAYADFAHLEMRVGKIVEVKRHENADKLYIVQVDVGEKTLQ
                     TVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERM
                     MPAGVRVV"
     gene            6512..7495
                     /gene="ebgR"
                     /locus_tag="JNZ89_003190"
     CDS             6512..7495
                     /gene="ebgR"
                     /locus_tag="JNZ89_003190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator EbgR"
                     /protein_id="HAY8936974.1"
                     /translation="MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEK
                     LEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTN
                     CYEHSGLPDIKNVTGILIVGKPTPALRAAACALTDNICFIDFHEPGSGYDAVDIDLAR
                     ISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSS
                     SSGYELAKQMLAQEDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTAR
                     FTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR"
     gene            7679..10771
                     /gene="ebgA"
                     /locus_tag="JNZ89_003191"
     CDS             7679..10771
                     /gene="ebgA"
                     /locus_tag="JNZ89_003191"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit alpha"
                     /protein_id="HAY8936975.1"
                     /translation="MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPL
                     SGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVP
                     FVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF
                     DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRT
                     DFDEAYCDATLSCEVVLGNLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASF
                     AFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYV
                     MLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGL
                     FVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNES
                     GYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPR
                     IICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGD
                     YGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHARDLTRGELKVENKLWFTT
                     LDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSR
                     TRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKM
                     SGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQ
                     SDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFT
                     MGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRW
                     TALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLG
                     SNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ
                     "
     gene            10768..11217
                     /locus_tag="JNZ89_003192"
     CDS             10768..11217
                     /locus_tag="JNZ89_003192"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit beta"
                     /protein_id="HAY8936976.1"
                     /translation="MRIIDNLEQFRQIYASSKKWQRCVEAIENIDNIQPGVAHSIGDS
                     LTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLK
                     GCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK"
     gene            11280..>12602
                     /locus_tag="JNZ89_003193"
     CDS             11280..>12602
                     /locus_tag="JNZ89_003193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8936977.1"
                     /translation="MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFF
                     LATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTS
                     LLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLM
                     LLLTLSYILLAGTALVGGVQPADPITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVY
                     VNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAY
                     FGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPA
                     RAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLD
                     HLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVG"
BASE COUNT         3015 a         3406 c         3169 g         3012 t
ORIGIN      
        1 tcggtggcgt tttttatcgc ccacgcacta ccagcgcctg gtccagctcg cgatacgctt
       61 caaccagttt ctctagtgaa acgcgactta aaccgctggg atttggcagc acccaaatct
      121 gcgtcgaacc aatggtgagc gtttgtttcc cccactgtgc accgcgctgg ctgaatccct
      181 gttcatatgc ttgtttgccc agaatcgcca acgcctgcgg ctgataatct tcaatttttt
      241 caatcagctt acgcccacct gcgtgcagct cctgctttga aacttcattg gcttgcaccg
      301 ttggacggtc taccagtttg gtgacgccac aacgataatc cagcagatgc tgtgcctcct
      361 gcggcttcaa ctgacggtcg gtaaacccgg cctgatatat caccttccag aagcgatttg
      421 ctggatgagc aaagggaaaa ccagtcccgg cggatgaaag cccagggttg ataccgcaaa
      481 acacgacccg taaccctgga gccaaaatat cctcaaccat atttactcct ttctaacatc
      541 accaggaaaa gtataacgga ttgaaaatac attgtttata aaaacagcag gcgcacggta
      601 atggctggat tgcgacacgg agttacttta taatccgcta ccatggcccc ttagctcagt
      661 ggttagagca ggcgactcat aatcgcttgg tcgctggttc aagtccagca ggggccacca
      721 gatatagcaa aggctgacga gaaatcgtca gcctttttct ttttatatct cagttacttt
      781 gcgtgccagt aagccgctgc acgtacccgc tgtgggtcat actgttccgc ttcaaagcgg
      841 cggcttaaat tcttaacgac tttaccttcg ccggttatcc agatgaagta atcatcggca
      901 gggatttgca tctgcgccag acgcgcatct accgcctgct catcatgtgc cagccattcg
      961 atattaaaac catcaaggtg cgcgagataa tcctgacagg cgttatcccg cacgctaacc
     1021 agcgcactaa cttgcggttt aacggcaagt ttgctcaacg tttccaggcg gcggcgcagt
     1081 gcgggcattc cggattcatc gcagacatac agctgatacg cgtaatcttc cggcaccacc
     1141 agcgaaccgc gcggaccagc caccgtaagt ttatcgcccg gttgcgcctg catcgcccag
     1201 ccgctggcga ccccaccgtc gtgaataaag aaatcgatcg ccagttcatg gcgtagttcg
     1261 tcatacagcg gcgtatagtc acgcgacggt gggcgtggtc cttccggcca gacgatgccc
     1321 tcttccgtta ccgttggcgg cacaaagtga gcgtcaggtt gaggaaagaa gagtttgctg
     1381 tgatcgtcaa agccgcgcga tgtaaaaccg tccagcgcct cgccgccgag gacaatgcgc
     1441 tgaaaaccgg cgctgatgcg ctcaacgcgt aacacagtca gttcacggaa gcgcagatca
     1501 ttgcgaacgc gctgcgggta gcggggggag ttattcattg ttatcgcctt cgtgatggta
     1561 atcagatata tctaaataat tttcgtaaat gataatgatt gttaatcatg ataaatgcaa
     1621 gcgattagta gaactgatat gtctatagtc tgataagacg aaccgcctct tctcaggcat
     1681 cattactcaa cgccggatgc ggcgtgaacg ccttatccgg cctacgtgtg agatgagtcc
     1741 acatttaaaa atcattttta ttcttgcaag agtgctcata tcagatataa attagatata
     1801 tctaatcaag aaaaaggagg ctgatatgag ccatcatcac gaagggtgtt gtaaacatga
     1861 aggccagcca cgccatgagg gctgctgcaa aggtgagaag tcagaacacg agcactgcgg
     1921 acacggtcac cagcatgaac acggtcaatg ctgcggtggt cgccacggtc gcggcggcgg
     1981 tcgtcggcaa cgtttctttg gtcacggtga attgcgtctg gtgattctgg atattctctc
     2041 gcgcgatgac agccacggtt acgaattgat taaagcgatt gagaatctaa cccaggggaa
     2101 ttacacccca agcccgggcg tcatctaccc aacgctggat tttctgcagg agcagtcgct
     2161 gattaccatc cgcgaagagg aaggtggtaa gaagcagatt gcgctgaccg aacaaggcgc
     2221 gcagtggctg gaagaaaacc gcgaacaggt ggagatgatt gaagaacgca tcaaagcgcg
     2281 ttgcgttggc gcggcgctgc gccagaaccc gcaaatgaag cgggcgctgg ataattttaa
     2341 agcggtgctg gatttacgcg tcaaccagag cgatatcagt gatgcacaaa taaaaaagat
     2401 cattgcggtg atcgaccgcg ccgcttttga tattacgcaa ctggattaat cgccgcatcc
     2461 gccagtggcg cggtgcaatt gccggatgcg acgcttgacg cgccttatcc ggcctacacc
     2521 cactacacac cccgcaggcc tgataagatg cgccagcatc gcatcaggca ttgtgctcca
     2581 accgccggat ccggcatacc gattaatgca gcaccgtcac cgcgtcttcc agtcggctgg
     2641 cgcggtgttt caccatcgcc gacacctgcg cactctcttc caccagctca gcatttttct
     2701 gggtgatcag gttaagctca tccactgcac gggtcaggct ggaaagccca tcggcctgtt
     2761 ccagcgttga atggctaatc tgggcgatca actgggtgac gtttttcacc tgtgccacaa
     2821 tatcttccat cgtccgtccg gcggcgtgta cctgctgcga accggattgc accttatcag
     2881 cactgacatc aatcagcttg cgaatatcgt tggcagcatt agcgctgcgg ctggctaaat
     2941 gacgcacttc ccctgccacc actgcaaaac ctttgccctg ttcgccggca cgcgccgctt
     3001 ccaccgccgc attcagggcc agaatattgg tctgaaacgc aatatcgtta atcagcgaag
     3061 taatggtgcc aatgcgctgg gtactgtcgg cgatatcgtc cattgtcttg atcaccgtgg
     3121 tcatcgcctc cccaccctgc actgccgcat tactggcgat gatagaaagt ttatcggcag
     3181 ccgacgccgt ggcagagttc tgtttcaccg acgccgccat ttggttcatg gtcgccaccg
     3241 tttgctgaac gttatcaact gtctgctggg tatgttcgtt cagttcatcg gtgcctttcg
     3301 ccagcgtctc actgccattt ctgacactgg acacctggct tgagacatcg ttaattagcc
     3361 aacggcacat caggccaagc tgccctaccg cgcgtaatgt cagccccagc tcatcgctgc
     3421 gattcaggtg ctcaacacta ttacgctctc cggtcgccac cttcagtgcc tgacgggcga
     3481 cattttctat cgggcgcaca atctgccatt caaaacaagc gcttgccaac aataccacta
     3541 acacacagag gaaatacgtc accaccgggg cagcaacaaa ccaaagcatg gccgccagca
     3601 agataaacat cagggtcatc actccacgcg cccgccagcg aagcggtaat gaaggcagtt
     3661 tacccagcca gcctttacgc accaccaggc ctttatgaat acgcttactg gtacgtccgg
     3721 cgttcagcgc tttgtacagc ggctccaccg ccgcaatctc ttcatccgtc gcccgggtac
     3781 gaatcgacat atagccactg atttttccct cgcgcaccat cggtaccgca ttggcccgca
     3841 cccaataatg gtcgccattt ttgcggcgat ttttcacgat gccgctccag ggctcccctt
     3901 ttttcagggt gaaccacata tccgcaaacg ccgcttttgg catatccggg tgacgcacca
     3961 tgttgtgcgg ctgcccttgt aactcttgca aggtaaagcc gctcacctgc acaaaagtgt
     4021 cattagcatg agtgatatag ctttgcagat cggtagtgga catcagagtg gtatcgtccg
     4081 ccagcggggt attttgctgg gtgacatacg gatgagaaga catgttcgcg tcctatgcag
     4141 gttatatggt tgttaacttc ttgtcagagt ttatgtcggc cccgctgcgg ttatctttaa
     4201 ccgattaatt tgatttagat cgcaatttgc gattaaagca caaatctaat tccttgattt
     4261 aaaatacttt cactctgtta ctatacgaaa acgttaatta tcttgcccaa aatcaggcaa
     4321 ttatcgccct gaaaacgtgc atttgcacag caatcatcaa atccataccc gacaaaaacc
     4381 gtgcaaaata acaacgaatg ttaacaaata gcattaaata ctgcgcaaat gataaccaca
     4441 tttgtgttta tcccgatttt cgcgatcgca gccggagtgg cgcaatccct gcaatactta
     4501 aatcggtatc atgtgatacg cgagcctccg gagcatattt tgaacaggtt accttcgagc
     4561 gcatcggctt tagcgtgcag cgcccacgcc ctgaatctca ttgagaagcg aacgctggat
     4621 catgaggaga tgaaagcact taaccgagag gtgattgaat acttcaaaga gcatgtcaat
     4681 ccggggtttt tagagtatcg caaatctgtt accgccggcg gggattacgg agccgtagag
     4741 tggcaagcgg gaagtttaaa tacgcttgtc gacacccagg gacaggagtt tatcgactgc
     4801 ctgggaggtt ttggaatttt caacgtgggg caccgtaatc cagttgtggt ttccgccgta
     4861 cagaatcaac ttgcgaaaca accgctgcac agccaggagc tgctcgatcc gttacgggcg
     4921 atgttggcga aaacccttgc tgcgctaacg cccggtaaac tgaaatacag cttcttctgt
     4981 aatagcggca ccgagtccgt tgaagcagcg ctgaagctgg cgaaagctta ccagtcaccg
     5041 cgcggcaagt ttacttttat tgccaccagc ggcgcgttcc acggtaaatc acttggcgcg
     5101 ctgtcggcca cggcgaaatc gaccttccgc aaaccgttta tgccgttact gccgggcttc
     5161 cgtcatgtgc cgtttggcaa tatcgaagcc atgcgcacgg ctcttaacga gtgcaaaaaa
     5221 accggtgatg atgtggctgc ggtgatcctc gaaccgattc agggtgaagg tggcgtaatt
     5281 ctgccgccgc cgggctatct caccgccgta cgtaagctat gcgatgagtt cggcgcactg
     5341 atgatcctcg atgaagtaca aacgggcatg gggcgcacgg gcaagatgtt cgcctgcgag
     5401 catgagaacg tacagccgga tatcctctgc cttgccaaag cgctcggcgg cggcgtgatg
     5461 ccgattggcg cgaccatcgc cactgaagag gtgttttcag ttctgttcga caacccattc
     5521 ctgcatacca ccacctttgg cggcaacccg ctggcctgtg cggcggcgct ggcgaccatc
     5581 aatgtgttgc tggagcagaa cttactggct caggctgagc aaaaaggcga tatgttgctg
     5641 gacggtttcc gtcaactggc gcgggaatat cccgatctgg tacaggaagc gcgtggtaaa
     5701 gggatgttga tggcaattga gtttgttgat aacgaaatcg gctataactt tgccagcgag
     5761 atgttccgcc agcgcgtact ggtggccgga acgctcaata acgccaaaac gatccgcatt
     5821 gaaccgccac tgacactgac cattgaacag tctgaactgg tgatcaaagc ggcgcgtaag
     5881 gcgctggcgg ccatgcgagt aagtgtcgaa gaagcgtaat atcaaatcgg atggcgatac
     5941 gacgtcgcca tccgatcttt ttatacgacg cgtacgcccg caggcatcat ccgctccggc
     6001 gttaacaaca cgctttcact gccgtcatcg gtttccgcac acaacagcat gcattccgac
     6061 gtttcaccac gcattttcgc tttttgcaga ttgcataaga ccaccaccgt tttccccatc
     6121 agctcttctt cgctgtagta cggcaccagg ctggtcacgg tttgcagtgt tttttccccc
     6181 acatcaacct gtacgatgta cagcttgtcg gcgttttcat ggcgtttcac ttccacaatc
     6241 tttccgacgc gcatttccag atgtgcaaaa tcagcgtaag ccacggtttc cattgtttcc
     6301 ttccttcggg taaaatttta ctaaactata gcaaaagttt ttctcaatcc tgtaggctaa
     6361 aaatggagaa tgcaggcgtg atcacattcg tgagccgctg tgttaccgtt acagcgtcaa
     6421 agaaacgcgc tttatttact gaaaacaggt gacccgataa gtacttcctc tacaatgggg
     6481 gcgcacatca gggaaagtaa aaaaggtaaa catggcaaca ctaaaagaca tcgcaatcga
     6541 agctggcgta tccctggcga cagtatccag ggtcttaaat gacgatccga cattgaatgt
     6601 gaaagaagag acgaaacatc gcattctcga gatcgccgaa aagctggagt acaagaccag
     6661 tagtgcccgc aaactccaga caggtgcagt caaccaacac catattctgg ctatctacag
     6721 ctaccaacag gagctggaga tcaacgatcc ttactatctg gcgatccgcc acggcattga
     6781 aactcagtgc gaaaagctgg gcattgagct caccaactgt tatgaacaca gcggattacc
     6841 agacattaaa aacgtcaccg gtattttaat tgtcggcaaa cccacgcccg cccttcgcgc
     6901 cgccgcctgt gcgttgaccg acaatatctg ttttatcgac tttcacgaac ccggcagcgg
     6961 ttacgatgcg gtggatatcg atctggcacg catcagtaaa gaaatcatcg acttctatat
     7021 caatcagggc gttaatcgta ttggttttat tggcggtgaa gatgagccag gcaaagcgga
     7081 tattcgtgag gtcgcctttg cggaatatgg ccgactgaaa caagtggtac gcgaagagga
     7141 tatctggcgc ggaggctttt ccagttcgtc gggttatgaa ctggcaaaac agatgctggc
     7201 gcaggaagac tatccgaagg cactgtttgt tgcttccgat tccattgcta tcggcgtact
     7261 gcgggcaatt catgaacgag gcctgaacat cccacaggat atttcgctta tcagcgttaa
     7321 cgatatcccc accgcgcgat ttacctttcc gccgctctcc accgtgcgca tccattccga
     7381 gatgatggga agtcagggcg ttaacctggt gtatgaaaaa gcccgcgatg gtcgcgcgct
     7441 gccgctgtta gtcttcgttc ccagcaaatt aaaactgcgc ggcacgaccc gttaaatccc
     7501 cttacacact gtccggcaat cgtttttgcc ggacagtgct gccgtttatt ttcgtgatcc
     7561 agttaaagta aatgcattta tctgctactt tttagtaaaa attttactaa actccccagc
     7621 aattacacaa actaccatca ccatgaatgg ttccgatttc tctctaccgg gaggccctat
     7681 gaatcgctgg gaaaacattc agctcaccca cgaaaaccga cttgcgccgc gtgcgtactt
     7741 tttttcatat gattctgttg cgcaagcgcg tacctttgcc cgcgaaacca gcagcctgtt
     7801 tctgccctta agcggtcagt ggaatttcca cttttttgac catccgctgc aagtaccaga
     7861 agccttcacc tctgagttaa tggctgactg ggggcatatt accgtccccg ccatgtggca
     7921 aatggaaggt cacggcaaac tgcaatatac cgacgaaggt tttccgttcc ccatcgatgt
     7981 gccgtttgtc cccagcgata acccaaccgg tgcctatcaa cgtattttca ccctcagcga
     8041 cggctggcag ggtaaacaga cgctgattaa atttgacggc gtcgaaacct attttgaagt
     8101 ctatgttaac ggtcagtatg tgggtttcag caagggcagt cgcctgaccg cagagtttga
     8161 catcagcgcg atggttaaaa ccggcgacaa cctgttgtgt gtgcgcgtga tgcagtgggc
     8221 ggactctacc tacgtggaag accaggatat gtggtggtca gcggggatct tccgcgatgt
     8281 ttatctggtc ggaaaacacc taacgcatat taacgatttc actgtgcgta ccgactttga
     8341 cgaagcctat tgcgatgcca cgctttcctg cgaagtggtg ctgggaaatc tcgccgcctc
     8401 ccctgtcgtc acgacgctgg aatataccct gtttgatggc gaacgcgtgg tgcacagcag
     8461 cgccattgat catttggcaa ttgaaaaact gaccagcgcc agctttgctt ttactgtcga
     8521 acagccgcag caatggtcag cagaatcccc ttatctttac catctggtca tgacgctgaa
     8581 agacgccaac ggcaacgttc tggaagtggt gccacaacgc gttggcttcc gtgatatcaa
     8641 agtgcgcgac ggtctgttct ggatcaataa ccgttatgtg atgctgcacg gcgtcaaccg
     8701 tcacgacaac gatcatcgca aaggccgcgc cgttggaatg gatcgcgtcg agaaagatct
     8761 ccagttgatg aagcagcaca atatcaactc cgtgcgtacc gctcactacc cgaacgatcc
     8821 gcgtttttac gaactgtgtg atatctacgg cctgtttgtg atggcggaaa ccgacgtcga
     8881 atcgcacggc tttgctaatg tcggcgatat cagccgtatt accgacgatc cgcagtggga
     8941 aaaagtctac gtcgagcgca ttgttcgcca tatccacgcg cagaaaaacc atccgtcgat
     9001 catcatctgg tcgctgggca atgaatccgg ctatggctgt aacatccgcg cgatgtacca
     9061 tgcggcgaaa gcgctggatg acacgcgact ggtgcattac gaagaagatc gcgatgctga
     9121 agtggtcgat attatttcca ccatgtacac ccgcgtgccg ctgatgaatg agtttggtga
     9181 atacccgcat ccgaagccgc gcatcatctg tgaatatgct catgcgatgg ggaacggacc
     9241 gggcgggctg acggagtacc agaacgtctt ctataagcac gattgcattc agggtcatta
     9301 tgtctgggag tggtgcgacc acgggatcca ggcacaggac gaccacggca atgtctggta
     9361 taaattcggc ggcgactacg gcgactatcc caacaactat aacttctgtc ttgatggttt
     9421 gatctattcc gatcagacgc cgggaccggg cctgaaagag tacaaacagg ttatcgcgcc
     9481 ggtaaaaatc cacgcgcggg atctgactcg cggcgagttg aaagtcgaaa ataaactgtg
     9541 gtttaccacg cttgatgact acaccctgca cgcagaggtg cgcgccgaag gtgaaacgct
     9601 cgcgacgcag cagattaaac tgcgcgacgt tgcgccgaac agcgaagccc ccttgcagat
     9661 cacgctgccg cagctggacg cccgcgaagc gttcctcaac attacggtga ccaaagattc
     9721 ccgcacccgc tacagcgaag ccgggcattc tatcgccact tatcagttcc cgctgaagga
     9781 aaacaccgcg cagccagtgc ctttcgcacc aaataatgcg cgtccgctga cgctggaaga
     9841 cgatcgtttg agctgcaccg ttcgcggcta caacttcgcg atcaccttct caaaaatgag
     9901 tggcaaaccg acatcctggc aggtaaatgg cgagtcgctg ctgacccgcg agccaaagat
     9961 caacttcttc aagccgatga tcgacaacca caagcaggag tacgaagggt tgtggcagcc
    10021 gaatcatttg cagatcatgc aggaacatct gcgcgacttt gccgtagaac agagcgatgg
    10081 tgaagtgttg atcatcagcc gcacagttat tgcaccgccg gtgtttgact tcgggatgcg
    10141 ctgtacctac atctggcgca tcgctgccga tggccaggtt aacgtggcgc tttccggcga
    10201 gcgttacggc gactatccgc acatcattcc gtgcatcggt ttcaccatgg ggattaacgg
    10261 cgaatacgat caggtggcgt attacggtcg tggaccgggc gaaaactacg ccgacagcca
    10321 gcaggctaac atcatcgata tctggcgcag caccgtcgat gccatgttcg agaactatcc
    10381 cttcccgcag aacaacggca accgtcagca tgtccgctgg acggcactga ctaaccgcca
    10441 cggcaacggt ctgctggtgg ttccgcagcg cccaattaac ttcagcgcct ggcactatac
    10501 ccaggaaaac atccacgctg cccagcactg taacgagctg cagcgcagtg atgacatcac
    10561 cctgaacctc gaccaccagc tacttggcct cggctccaac tcctggggca gcgaggtgct
    10621 ggactcctgg cgcgtctggt tccgtgactt cagctacggc tttacgttgc tgccggtttc
    10681 tggcggagaa gctaccgcgc aaagtctggc gtcgtatgag ttcggcgcag ggttcttttc
    10741 cacgaatttg cacagcgaga ataagcaatg aggatcatcg ataacttaga acagttccgc
    10801 cagatttacg cctctagcaa gaagtggcaa cgctgcgttg aagcgattga aaatatcgac
    10861 aacattcagc ctggcgtcgc ccactccatc ggtgactcat tgacttaccg cgtggagaca
    10921 gactccgcga ccgatgcgct atttaccggg catcgacgct attttgaagt gcattactac
    10981 ctgcaagggc agcaaaaaat tgaatatgcg ccgaaagaga cattacaggt agtggaatat
    11041 tatcgtgatg aaactgaccg tgaatattta aaaggctgcg gagaaaccgt tgaggtccat
    11101 gaagggcaaa tcgttatttg cgatatccat gaagcgtatc ggtttatctg caataacgcg
    11161 gtcaaaaaag tggttctcaa agtcaccatc gaagatggtt atttccataa caaataacaa
    11221 ctacggcggc aaaaggagtt tgccgccacc gctaccctac acattttcgg agatgtgtta
    11281 tgtctgatac caaacgtaat acaatcggca aattcggctt gctctcgctg acttttgctg
    11341 ccgtttacag ctttaacaac gttatcaata ataatattga gcttggactg gcctcggcac
    11401 cgatgttttt cctcgcgacg attttttatt ttattccctt ctgtctgatc atcgcagaat
    11461 ttgtttcgtt aaataaaaac tcagaagccg gtgtctacgc gtgggtaaaa agttcgctgg
    11521 gcggacgttg ggcatttatt actgcctata cctactggtt cgtaaacctg ttctttttca
    11581 cctcactgtt gccgcgcgtt attgcttatg cttcgtatgc cttcctcgga tacgaatata
    11641 ttatgacgcc ggttgccacc accattatca gtatggtgct gttcgccttc tccacctggg
    11701 tttccaccaa cggggcgaaa atgttggggc caattacctc cgtcacttca acgctgatgc
    11761 tgctgttaac gctctcctac attttactgg caggtacggc gctggttggc ggcgtacagc
    11821 ctgctgaccc catcaccgtt gacgcgatga tcccgaactt caactgggcg ttcctcggcg
    11881 ttaccacctg gatctttatg gccgcaggtg gcgcggagtc cgtcgctgtg tacgttaacg
    11941 acgtcaaagg cggttcgaaa tcgttcgtta aagtgatcat cctcgccggg atttttatcg
    12001 gcgtactgta ttccgtctcc tcggtgctga ttaacgtctt cgtcagcagc aaagagttga
    12061 aatttaccgg cggatcggtg caggtattcc atggcatggc ggcgtatttt ggtctaccgg
    12121 aagcgttgat gaatcgcttt gtcggtctgg tgtcctttac cgcgatgttc ggttccctgc
    12181 tgatgtggac cgcaacgccg gtgaaaattt tcttctccga aatcccggaa ggcatctttg
    12241 gtaagaaaac cgtcgaactg aacgaaaacg gcgttccggc gcgcgcagcg tggatccagt
    12301 tcctgatcgt catcccgctg atgattatcc cgatgctcgg ttccaatacc gtgcaggatc
    12361 tgatgaatac aattattaat atgaccgccg cagcgtccat gcttccgccg ttattcatca
    12421 tgctggctta cctgaattta cgcgccaaat tagatcacct gccacgcgat ttccgtatgg
    12481 gctcccgccg caccggtatt atcgttgttt caatgctgat tgcgatattt gccgtagggt
    12541 ttgtcgcttc gacattcccg actggcgcga atattctgac catcattttt tataacgtcg
    12601 gc
//
LOCUS       DADMIB010000126        12583 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.126, whole genome shotgun sequence.
ACCESSION   DADMIB010000126 DADMIB010000000
VERSION     DADMIB010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12583
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.126"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(219..1283)
                     /gene="phoH"
                     /locus_tag="JNZ89_003194"
     CDS             complement(219..1283)
                     /gene="phoH"
                     /locus_tag="JNZ89_003194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HAY8936978.1"
                     /translation="MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDA
                     VNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKA
                     RREAKRVLRRDSRSHKQREEESVTSLVQMSGVEAIGMARDSRDTSPILARNEAQLHYL
                     KAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGD
                     IAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDE
                     AQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVR
                     FGKEDCVRSALCQRTLHAYS"
     gene            complement(1629..2900)
                     /gene="efeB"
                     /locus_tag="JNZ89_003195"
     CDS             complement(1629..2900)
                     /gene="efeB"
                     /locus_tag="JNZ89_003195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HAY8936979.1"
                     /translation="MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGT
                     LSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLT
                     QGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
                     TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHA
                     ARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQ
                     FRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLAN
                     PRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALE
                     EYVKPIGGGYFFSLPGVKDANDYLGSALLRV"
     gene            complement(2906..4033)
                     /locus_tag="JNZ89_003196"
     CDS             complement(2906..4033)
                     /locus_tag="JNZ89_003196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HAY8936980.1"
                     /translation="MTINFCRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPM
                     TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT
                     CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA
                     IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR
                     LEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI
                     SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY
                     RTKDGFETYDKLTDADRNALKGPITAQAEDLAQLRGVLGLD"
     gene            complement(4091..4919)
                     /locus_tag="JNZ89_003197"
                     /pseudo
     CDS             complement(4091..4919)
                     /locus_tag="JNZ89_003197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309290.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
     gene            4955..5257
                     /locus_tag="JNZ89_003198"
     CDS             4955..5257
                     /locus_tag="JNZ89_003198"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936981.1"
                     /translation="MQRKVNRSDSDYHYGKEKYKRNVYKMMLECKQREVMPGDINDYS
                     RVERWDCLQRTMCSCRMPRKRHIQPTKLSRLNASELPCKTDKRVYQAISSIRDYQI"
     gene            complement(5588..7096)
                     /gene="putP"
                     /locus_tag="JNZ89_003199"
     CDS             complement(5588..7096)
                     /gene="putP"
                     /locus_tag="JNZ89_003199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HAY8936982.1"
                     /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP
                     FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
                     YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
                     ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEV
                     IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT
                     WMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQILFNPWIAGILLSAI
                     LAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAN
                     PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWL
                     GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES"
     gene            complement(7255..7464)
                     /locus_tag="JNZ89_003200"
     CDS             complement(7255..7464)
                     /locus_tag="JNZ89_003200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8936983.1"
                     /translation="MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQ
                     LTFLKGATAKNVRECNLMKNSVAEH"
     gene            7519..11481
                     /gene="putA"
                     /locus_tag="JNZ89_003201"
     CDS             7519..11481
                     /gene="putA"
                     /locus_tag="JNZ89_003201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001462364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional transcriptional regulator/proline
                     dehydrogenase/L-glutamate gamma-semialdehyde
                     dehydrogenase"
                     /protein_id="HAY8936984.1"
                     /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL
                     ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP
                     ETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQ
                     EGVALMCLAEALLRIPDKATRDALIRDKISNCNWQSHIGRSPSLFVNAATWGLLFTGK
                     LVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE
                     EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
                     PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLENLCFEPE
                     LAGWNGIGFVIQAYQKRCPLVIDYLVDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL
                     EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQY
                     EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTYETLLAYLVRRLLENGANTSF
                     VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL
                     ANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPR
                     EVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI
                     AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
                     VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGS
                     TEVATLLQCNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG
                     QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI
                     QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELHKEVFGPVLHVVRYN
                     RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF
                     GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNAL
                     REWAANRPELQALCTQYGELAQAGIQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL
                     TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDS
                     DQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
                     "
     gene            complement(11521..12159)
                     /gene="rutR"
                     /locus_tag="JNZ89_003202"
     CDS             complement(11521..12159)
                     /gene="rutR"
                     /locus_tag="JNZ89_003202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator RutR"
                     /protein_id="HAY8936985.1"
                     /translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI
                     AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL
                     EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ
                     HLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR"
     gene            12447..>12583
                     /locus_tag="JNZ89_003203"
     CDS             12447..>12583
                     /locus_tag="JNZ89_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HAY8936986.1"
                     /translation="MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDF
                     AL"
BASE COUNT         3049 a         3482 c         3168 g         2884 t
ORIGIN      
        1 gctcattttt ttggcttctg gaagaaaaac tctccgcgct ggcagtatta cactggtctg
       61 atgctatgac gaaaaatgcc tggtaagagt atctaaacca gactccagtt cagcttatca
      121 acacgctcaa agtcgccccc ctgaacgcta acctgaagtg aaaatctgtt gaaataaaac
      181 aaagcccggt tcgcccgggc tctgcaccga taacacactt aactgtatgc atgcagcgta
      241 cgttggcaaa gtgccgaacg tacgcaatcc tcttttccga accggacgat cccaaccatt
      301 tcatcttctt cgaaacgttc cagcgcgtca cttaatccgg agcacacgcc gcgaggcaaa
      361 tcgcattgcg tgatatcacc gttgacgata accgtcacgt tctccccgag gcgggttaaa
      421 aacattttca tttgcgcggc agtcacattc tgcgcctcgt caagaatgac gactgcattt
      481 tcaaaggtac gtccacgcat ataggcgaac ggcgcgattt ccaccttccc tatttccggt
      541 cgcaggcagt actgcataaa ggaagcccct aagcgccgga ccagcacgtc gtagaccggg
      601 cgaaaatagg gagcaaactt ttctgcgata tcaccaggta agaagccaag atcttcatcg
      661 gcttgcagaa ctggacgggt gacgataatc ctgtcgacat ccttatgtat cagggcctct
      721 gccgcttttg ctgcgctgat ccaggttttt ccgcacccgg cttcgcccgt ggcgaatatc
      781 agctgcttac tctcaatagc cttcagatag tgcaattgcg cttcatttcg cgcgaggatg
      841 ggcgaggtat cgcgactgtc gcgggccata ccaatggctt ctacgccgct catctgcaca
      901 agcgaggtga ccgattcttc ttcacgctgc ttatggctgc gcgaatcccg tctcagcaca
      961 cgttttgcct cgcgacgagc tttgatcact gctttttgtc ttcccatgga gagcaccttg
     1021 agttgtttgt attcatcaca cgcgccgttg gcagcgcgat tatgcgcacg aacatcagag
     1081 ggttggcttc cttgtaagcc atagtttgct tttggataaa atgccgaaaa acggctacgc
     1141 gcaccgttta cggcgtcggt aacacatgaa aagaaaggat gaggttgaaa atgcaaagtg
     1201 acgagatgac taccggagga gaaaactccg cgagtggtgg cgcgttgatt atctaaaaca
     1261 tgtccagtac aggacgttac catccgcgat ctccatagtg actgactatc actgccggga
     1321 acttccgctg ctacttaata agtacaacag atctcgcatt ttattgcaac aatatattta
     1381 cttatattta actataaaac actatttcag tgacattagt ttctactgga aagatgacag
     1441 agtgatgaca gtgatgaaaa aagctgtgtg ctttcagcag gatttgcatc aggcatcagt
     1501 gcacgatcgc cggatgcggc gtgaacgcct tatccagcct accaaacccg cactgattgt
     1561 aggcatgata agacgcgcaa gcgtcgcatc aggcatctgc gcacaaatgc cttatccgcc
     1621 taaaaacatt aaacccgcaa taacgcgctt ccgagataat cgttcgcgtc cttcactccc
     1681 ggcagcgaaa aaaaataacc gccgccgata ggtttaacgt attcctccag cgcttcgcca
     1741 ttgagccttt tttgtactgt caggaagcct ttttccagat cgtgttggta gcagacaaac
     1801 agcaacccca tatccagttg tccggagttg gtgaccccca acgaataact gtagccgcga
     1861 cgcagcatca ggctggactc actctccgcc gtgcggggat tcgccagccg gatatggctg
     1921 tccagcgcga tcaccttccc ttccgggtcg ctggcgtaat caggcacatc atgctcatgc
     1981 tgcattccca gcggcgcacc ggtttgctta tcacggccaa aaatcgtctg ctgttctttc
     2041 agcggcgttc tgtcccaaaa ttccactcga aactgaatca agcgtactgc ctgatagctg
     2101 ccaccgattg tccacgcagg ctcctgctga tctgccgtta cccacaccac tttttgcatc
     2161 aacttatcat tctggctatc gggattggca gtgccgtctt taaagcccag caaattaatc
     2221 ggcgtctctt tgcctttact acgcgctgcg tgatcggaaa taaacccttc ccgcttccag
     2281 cgcacgctga gcaaatccgg cgtgtgtttg atgatatcgc gcagcgcatg gatcaccgtg
     2341 tcctgggtgt tggcgcaaat ttgtagcaac acatcaccat ggcataacgc cgcatccagc
     2401 gagtcgttgg ggaaacgcgt catcttctgc aactttttcg gcatctgtgg cgcaaggcca
     2461 aaccgctcat caaacaatga gtgacccacc gataacgtga tggtgagatt atcgggcgca
     2521 atgtagccgc caagaatgcc ggaatcgagt ggtggcaggc gcggatttgg cgtttctggt
     2581 gccgctccgc cctgagtcag aaaagcaaaa cgctgagtca acaagcgaaa caaccgttca
     2641 agatcggctt tatcgctggc aagcacatca aacgccacca gcatcattgc ggcctgttgt
     2701 ggcgtcagga tccctgcctg atgctcacca taaaacggct gtttctcatt gcgtgcatcc
     2761 ggtgaaagcg tacccggcgc actttgcgtt ttttgtgcat gagcgaccgg acaacttccc
     2821 gccagcgcca gcgcacctat cactttcagt aaacgtcggc gtgacggttc attcacgccg
     2881 ttttcatctt tatactgcat aacgcttaat ccagtcccag cacaccgcga agttgcgcca
     2941 gatcttccgc ctgcgcagta atcggtcctt tcagtgcatt ccggtcggca tcggtcaatt
     3001 tgtcgtaggt ttcaaaaccg tctttagtac ggtatttcgc cagaatggta tcgacctttt
     3061 taaagttggc atcgactttt gccagcagtt ccgggttggc tttttgcagt tgtggacgca
     3121 gcaaatcgac aattttctgc gagccttcaa cgttagcctg gaaatcccac agatcggtgt
     3181 ggctgtagcg atcttcttca ccgctaattt tgctggctgc cacttcctca atcagtccgg
     3241 ctgcgccgcc gaccactttt gaaggtggga aagccagttc actgatgcgt ttttgcaaat
     3301 cgaccacatc tgtataaagc tgctcagcgt actgatccat ccctttggtg gtgttgtcgc
     3361 caaacaatgc tttttccaga cggtggaaac cagtgaattt tgggtcggcg gctttttgct
     3421 cgtaatcatc ttcacgggcg tcaatgctgc catccagatc ggagaacagt tcagcaatcg
     3481 gttcaatgcg ctcatagtgc tggcgcgtcg gcgcatacag tgctttcgct ttttcgatat
     3541 cgccagcttt aatcgcgtcg gtaaaggctt tggtgtcggt caccagctgc gtggtttccg
     3601 ccatgacata cgctttatat gcagtaattg caccaccaag acttaacagc gcatcacttt
     3661 gcgccgcatc cgccgttgcc tcacctttga cgatcaactt ccctttcggg ttagtcagca
     3721 gaccgcaggt catatcgtat tcgccaggct gtaaattcgc cgtcattttc tggctaaaac
     3781 caggggcgat attttcccgc tcttccacca ccatcacgcc tttgaggatc tcccactcca
     3841 gcgccttctg gctatggttc tgaataatga actgtgtttt cccggcgtta accgtaatgg
     3901 tcatcggttc gcactgctta tccgtcacgg tcactttgac ctgcggcaca tcagcggcgt
     3961 tagccataaa agcagaagaa aacagcgcag ccacgctcaa ctgcaatgcg ttacggcaga
     4021 agttaatggt catgacgaga ctatcccttt aaagtatgtt gtaactaagc aagagtttgc
     4081 gtcgtatttg ttacgcggag cgagacgctg tcgcccctgc gcgtggtggc agagcaaatg
     4141 ccaccagcgc cgggatgaga taaataaacc agacggcgac ttcgctgacg ctcggcgctt
     4201 cctgatagcc aaaaatccct tccatcagcg tgccaaacag cgagtgagtt gagagcaccg
     4261 cactcatatc gaaggcgatt tcctgaaagt ggttccacaa tccggcttca tgaaatgcgc
     4321 gaatggcacc agctgccagc cctgcggcga cgaagagaat aaacaggctg gtccatttaa
     4381 aaaatgcacc aagattgagg cgaataccgc cccagtagag cagaaagccg agcaccacgg
     4441 ctgtagcaag accgagcatt gcacccagcg gcggccagat cccgacatct tgttgaaatg
     4501 ccgccagcag gaaaaagacc gactccagcc cttcccttgc aacggcaaaa aagaccatca
     4561 tcaccagcgc ccagccatga tgatttccac gctacaatgc gctatcgact gcctgttcca
     4621 gttgcactta cgttgcgcga cactttgcgc atccagaaaa ccatccaggt aaggatcacc
     4681 acggcgatca ccgccacgat accttcaaac agttcctgtt ctttttgcgg aaattcgccg
     4741 gtggtttcgt taatgaagat ccccaggccc aggcacaacg cagcggcaag caacacgcca
     4801 atccacatca caccaatcca tcggcctcgc tgggtacgct taagatagct ggcaatcaaa
     4861 ctgacaatca gcgcggcttc aagtccttcg cgcaacataa tgagaaacgg aacaaacatg
     4921 ccacccaccc ttaaacgttt ttctgagtca atctatgcaa agaaaagtaa atcgcagtga
     4981 tagcgattat cattacggta aagaaaaata caagcggaat gtttataaaa tgatgttgga
     5041 atgtaaacaa agagaggtaa tgccagggga tataaacgat tattccaggg tagaaagatg
     5101 ggattgtttg caaagaacca tgtgttcttg ccggatgccg cgtaaacgcc atatccagcc
     5161 gacaaaactg tccagactca atgcatcaga gcttccatgt aaaactgata agcgggtgta
     5221 tcaagcaatt tcgtccatcc gcgattatca aatctaactt tttgcccgga acataataac
     5281 agctcgggtg ttggtggcgt caaaatcgct gaagcgttcc ccgaaggccg ggacagccca
     5341 catggatgtg ggctgagggc gcgtcttaca ggacgttacc tcgcgcccga cccggtagcc
     5401 gaaggggata agctgaaggt accgcgcagc ggcgattttg ttcgccagag cccgggggtg
     5461 cacagggggc ggcggcgatt ggccgccccc tgcgcgctcc ctgcaccatt caatttatat
     5521 ggcgaggcac attaagggag cgcaacccgc tgctgaagcc aaacaaaacc gccgcaggct
     5581 aagtccctta gctttcctgc aaccgtgacg gcggagccga atgatagtgc gcatcggcct
     5641 cggcaaagcg tttttgcatc gccgctgacg gcgctttacc cagcaaacta aacactacaa
     5701 tcccgatact gccgaagatg aagcccggaa taatttcgta cagtcccagc cagccgaact
     5761 gcttccagac gataaccgtc agcgcaccga tgatcatccc cgccagtgca ccgttacgcg
     5821 tcatgcgtga ccacatcacc gagaacagca ccaccggacc aaacgccgcg ccaaagcctg
     5881 cccacgcgta gctcactaag cccagcacgc ggttttccgg gtttgccgcc agcgcaatcg
     5941 ccaccagcgc caccaccagc accatcacac gccctaccca caccagctct ttctggctgg
     6001 catgtttacg cagaaacgct ttgtataaat cttcggtaat cgcactggag cacaccagca
     6061 gttggcaact taaggttgac attaccgccg ccagaattgc cgacagcaga atcccggcaa
     6121 tccacgggtt aaacagaatt tgcgccagtt cgataaacac gcgctcggcg ttctggttta
     6181 ccgcgcctgc taccgccggg tgctcattaa agtaagcaat cccaaagaag ccgacagcca
     6241 ccgcccctgc caggcagagg atcatccagg tcatactgat acgacgcgca tggacaatgc
     6301 tgtggtgaga atccgccgcc ataaaacgcg ccagaatgtg cggctgcccg aagtaaccca
     6361 gcccccaacc catcagtgag ataatggcaa caaagttcag acctttgagc atatcaacgt
     6421 tttcgatgct cttttgtttg atcacttcca gcgagtcacc aaagccaccg acactgataa
     6481 tgacgataac cggtgtcagg atcagggcaa aaatcatcag gctggcctgt acagtgtcag
     6541 tccagctcac cgcgaggaaa ccgccaataa aggtgtaaag gatcgtcgcc gcagctcccg
     6601 cccacagagc cgtttcgtag ctcatgccaa aggtactttc aaacagacgc gcgcctgcca
     6661 caatgcccga agcgcaataa atggtgaaga acagcaaaat aaccagcgcg gagataatgc
     6721 gcaaaatgcg gcttttatct tcaaaacgcc cggtgaaata atccggcaat gttaaggcgt
     6781 tattattgta ttcggtatgc acacgcaacc gcccggccac cagcttccag ttgatccacg
     6841 cgcctaatgt caggccaatg gcgatccagc tttcggaaat cccggaaaga aaaaccgcgc
     6901 caggcaaccc cattaacagc cagccgctca tatccgacgc acccgccgat aatgccgtca
     6961 caaatggccc aagactacga ccgcccagaa tatagtcgtc aaagtttttc gttgatcgcc
     7021 aggcgataaa cccaatcaat atcatgccaa agatatagac acaaaatgtc accaacatcg
     7081 gtgtgctaat agccatctaa agtctccaaa aaattattat cggcaatgtc gaaacttgcc
     7141 gttatatctg caaccggaac ggggtaacag agtttatttt ttaccagggc gaccgtatcc
     7201 tgccggaagc gctggttatt cacaatcgat ttaacacacc atttacatta aattttagtg
     7261 ctcagcgaca ctatttttca tcaggttgca ctctctcaca ttttttgcgg ttgcaccttt
     7321 caaaaatgtt aactgccgca gagaaaaagt ctgagttatt tttttaatcc ctgtcatatc
     7381 aatttctttt attaacattt cattcatttt taagcttgct acgcaggtca catttaacat
     7441 ggttgcacaa agttgcaaca tcatggatat ttcacgataa cgttaagttg cacctttcag
     7501 aacaacagga gtaatggcat gggaaccacc accatggggg ttaagctgga cgacgcgacg
     7561 cgtgagcgta ttaagtctgc cgcgacacgt atcgatcgca cgccacactg gttaattaag
     7621 caggcgattt tttcttatct cgaacaactg gaaaacagcg atactctgcc agagctacct
     7681 gcgctgcttt ctggtgctgc caatgagagc gatgaagcac cgactccggc agaggaacca
     7741 caccagccat tcctcgactt tgccgagcaa attttgcccc agtcggtttc ccgcgccgcg
     7801 atcaccgcgg cctatcgtcg cccggaaacc gaagcggttt ctatgctgct ggaacaagcc
     7861 cgcctgccgc agccagttgc tgaacaggcg cataaactgg catatcaact ggccgataaa
     7921 ctgcgtaatc aaaaaaatgc cagtggtcgc gcaggtatgg tccaagggtt attgcaggag
     7981 ttttcgctgt catcgcagga aggcgtggcg ctgatgtgtc tggcggaagc gttgttgcgt
     8041 attcccgaca aagccacccg cgacgcgtta attcgcgaca aaatcagcaa ctgtaactgg
     8101 cagtcacaca ttggtcgtag cccgtcactg tttgttaatg ccgctacctg ggggctgttg
     8161 tttactggca aactggtttc cacccataac gaagccagcc tctcccgctc gctgaaccgc
     8221 attatcggta aaagcggtga accgctgatc cgcaaaggtg tggatatggc gatgcgcctg
     8281 atgggcgagc agttcgtcac gggtgaaacc atcgcggaag cgttagccaa tgcccgcaag
     8341 ctggaagaga aaggtttccg ttactcttac gatatgctgg gcgaagctgc actgactgcc
     8401 gcagacgcac aggcgtatat ggtttcctat cagcaggcga ttcacgccat tggtaaagcg
     8461 tctaacggtc gtggcatcta tgaaggtccg ggcatttcaa tcaagctgtc ggcgctgcat
     8521 ccgcgctaca gccgcgccca gtatgaccgg gtaatggaag agctttaccc gcgtctgaaa
     8581 tcactcaccc tgctggcgcg tcagtatgat attggtatta acatcgatgc cgaagaggcc
     8641 gatcgtctgg agatctccct cgatctgctg gaaaatctct gtttcgagcc ggaactggca
     8701 ggctggaacg gcatcggttt tgttattcag gcttatcaaa aacgctgccc gttggtgatc
     8761 gattacctgg ttgatctcgc cacccgcagc cgtcgccgtc tgatgattcg cctggtgaaa
     8821 ggcgcgtact gggatagtga aatcaagcgt gcgcagatgg acggccttga aggctatccg
     8881 gtttataccc gcaaggtgta taccgacgtt tcttatctcg cctgtgcgaa aaagctgctg
     8941 gcggtgccga atctaatcta cccgcagttc gcgacgcaca acgcccatac gctggcagcg
     9001 atttatcaac tggcaggtca gaactactat ccgggtcagt acgagttcca gtgcctgcat
     9061 ggtatgggcg agccactgta cgagcaggtc acagggaaag ttgccgacgg taaacttaac
     9121 cgaccgtgtc gtatttatgc cccggttggc acatatgaaa cgctgctggc gtatctggtg
     9181 cgtcgcctgc tggaaaacgg tgctaacacc tcgtttgtta accgtattgc cgacacctct
     9241 ttgccactgg atgaactggt cgccgatccg gtcactgctg tagaaaaact ggcgcaacag
     9301 gaagggcaaa ctggattacc gcatccgaaa attcccctgc cgcgcgatct ttacggtcac
     9361 gggcgcgaca actcggcagg gctggatctc gctaacgaac accgtctggc ctcgctctcc
     9421 tctgccctgc tcaatagtgc actgcaaaaa tggcaggcct tgccaatgct ggaacaaccg
     9481 gtagcggcag gtgagatgtc gcccgttatt aaccctgcgg aaccgaaaga tattgtgggc
     9541 tttgtgcgtg aagccacgcc gcgtgaagta gaacaggcgc tggaaagtgc ggttaataac
     9601 gcgccaatct ggtttgccac gcctccggct gaacgcgcgg cgattttgca tcgcgctgcc
     9661 gtgctaatgg aaagccagat gcagcaactg attggtattc tggtgcgtga agccggaaaa
     9721 accttcagta acgctattgc cgaagtgcgc gaagcggtcg attttctcca ctactacgcc
     9781 ggacaggtgc gggatgattt cgctaacgaa acccaccgtc cattagggcc tgtggtgtgt
     9841 atcagtccgt ggaacttccc gctggctatt ttcaccgggc agatcgctgc cgcactggcg
     9901 gcaggtaaca gcgtgctggc aaaaccggca gaacaaacgc cgctgattgc cgcgcaaggg
     9961 atcgccattt tgctggaagc gggtgtaccc cctggcgtgg tgcaattgct gccaggtcag
    10021 ggggaaaccg tgggcgcgca actgacgggt gatgatcgcg tgcgcggggt gatgtttacc
    10081 ggttcaaccg aagtcgctac gttactgcag tgcaatatcg ccagccgcct ggacgctcag
    10141 ggtcgcccta ttccgctcat cgctgaaacc ggcggcatga acgcgatgat tgtcgattct
    10201 tcagcactga ccgaacaagt cgtcgtggat gtgctggcct cggcgttcga cagtgcgggt
    10261 cagcgttgtt cggcactgcg cgtgctgtgc ctgcaagatg agattgccga ccacacgttg
    10321 aaaatgctgc gcggtgcaat ggccgaatgc cggatgggta atccgggtcg cctgaccacc
    10381 gatatcggtc cggtgattga tagcgaagcg aaagccaata ttgagcgcca tattcagacc
    10441 atgcgtagca aaggccgtcc ggtgttccag gcggtgcggg aaaacagcga agatgcccgt
    10501 gaatggcaaa gcggcacctt tgtcgccccg acgctgatcg aactggatga ctttgccgaa
    10561 ttgcacaaag aggtctttgg tccggtgctg catgtggtgc gttacaaccg taaccagcta
    10621 ccagagctga tcgagcagat taacgcttcc ggctatggtc tgacgcttgg tgtccatacg
    10681 cgtattgatg aaaccatcgc ccaggtcact ggctcggccc atgttggtaa cctgtatgtt
    10741 aaccgtaata tggtgggcgc agtggttggt gtgcagccgt tcggcggcga agggttgtcc
    10801 ggtaccgggc cgaaagcagg cggtccgctc tatctctacc gtctgctggc gaatcgcccg
    10861 gaaagtgcgc tggcagtgac gctcgcgcgt caggatgcag agtatccggt cgatgcacag
    10921 ttgaaagccg cattgactca gccgctaaat gcactgcggg aatgggcagc aaatcgtcca
    10981 gaattgcagg cgttatgtac gcaatatggc gagctggcgc aggcaggaat acaacgattg
    11041 ctgccggggc cgacgggtga acgcaacacc tggacgctgc tgccgcgtga gcgcgtgttg
    11101 tgtattgccg atgatgagca ggatgcgctg actcagctcg ccgccgtgct ggcggtgggc
    11161 agccaggtac tgtggccgga tgacgcgctg catcgtcagc tagtaaaggc attgccatcg
    11221 gcagtcagcg aacgtattca actggcgaaa gcggaaaata taaccgctca accctttgat
    11281 gcggtgatct tccacggtga ttcggatcag cttcgcgcat tgtgtgaagc cgttgctgcg
    11341 cgggatggag caattgtttc ggtgcagggt tttgcccgtg gcgaaagcaa tatccttctg
    11401 gaacggctgt atatcgaacg ttcgctgagt gtgaataccg ctgccgctgg cggtaacgcc
    11461 agtttaatga cgatcggtta aacaggtagc cggaggatgt tacaccctcc tccggcatct
    11521 ttaacgtggt cgaatcccct caataataat ccgctgcacg ttttcaaccg tttgattgaa
    11581 aaatacctca tcgcgcaacg ttgcgcctgt caccgcctcc acctgagggg cgaaatcggc
    11641 gtaatgttga gtggaagccc aaatcataaa aatcaaatgc tgcggatcaa tcggcgcgag
    11701 tttgccgctt ttgacccaac cggcaatcag cgccgatttc tcatcaatta atgccttcaa
    11761 atcgcccgtc agttcatcca ttaacagcgg cgcgcctgcc agcatctcca tacagaacag
    11821 gcgcgaagcc tgcggataat cgcgtgagac ttccagcttc agacggatgt actctttgat
    11881 cgccgccagc ggggcgaaat cttcacgaaa cgcttttaac ggtgccagcc agatatcgag
    11941 aatctgccgc agcacggcaa tatacagcgc ctcttttgac ggaaagtaat acagcagatt
    12001 ggtttttgaa acacccgcca actctgcgat ctgctccagc cttgtgccgt gaaaaccgaa
    12061 ttgtgaaaaa gtgtccagtg ctgcgctaag aatcgctttt ttcttcgcgc ttactgcgcg
    12121 cgaacgttta cccgttgttt tcactgcgcc ttgcgtcatg cgctctcccc tcttgtagat
    12181 tggcaacagg atagcaaaac ccccgcccgg cctcgacctt ctgcactctc atcgcgcacg
    12241 gatgcatgtt ttatgtgcaa ctgttttgac cgtttagtcc actttttacc agatatttta
    12301 gataacacaa tgctaacaca ttaataacat tcacttttta aaaactggca tccgctttgc
    12361 aaacaagcca atacgcggct gaaaaggata tgcaggatgc agcgccccgt ctgactttca
    12421 ctttacgaga cgaagagagg ttgatgatga aaattggcgt attcgtacct attggcaaca
    12481 acggctggct catttcgacc cacgcgccgc agtacatgcc gacctttgaa ctgaataaag
    12541 ccattgtgca aaaagcggag cattaccatt tcgatttcgc cct
//
LOCUS       DADMIB010000127        12464 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.127, whole genome shotgun sequence.
ACCESSION   DADMIB010000127 DADMIB010000000
VERSION     DADMIB010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12464)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12464)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12464
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.127"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(94..1185)
                     /gene="ychF"
                     /locus_tag="JNZ89_003204"
     CDS             complement(94..1185)
                     /gene="ychF"
                     /locus_tag="JNZ89_003204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HAY8936987.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
                     PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
                     VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
                     ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
                     LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL
                     LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ
                     GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
     gene            complement(1302..1886)
                     /gene="pth"
                     /locus_tag="JNZ89_003205"
     CDS             complement(1302..1886)
                     /gene="pth"
                     /locus_tag="JNZ89_003205"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HAY8936988.1"
                     /translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK
                     FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV
                     AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK
                     LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ"
     gene            2164..2442
                     /gene="ychH"
                     /locus_tag="JNZ89_003206"
     CDS             2164..2442
                     /gene="ychH"
                     /locus_tag="JNZ89_003206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein YchH"
                     /protein_id="HAY8936989.1"
                     /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH
                     GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS"
     gene            complement(2497..4176)
                     /gene="dauA"
                     /locus_tag="JNZ89_003207"
     CDS             complement(2497..4176)
                     /gene="dauA"
                     /locus_tag="JNZ89_003207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HAY8936990.1"
                     /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI
                     PLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVIIYPVSQQFGL
                     AGLLVAALLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
                     AHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA
                     VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIR
                     TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA
                     AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE
                     AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP
                     VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF
                     QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPISGRLAFFPNRRAAMADL"
     gene            complement(4301..5248)
                     /locus_tag="JNZ89_003208"
     CDS             complement(4301..5248)
                     /locus_tag="JNZ89_003208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HAY8936991.1"
                     /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI
                     NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
                     LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
                     VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
                     LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
     gene            complement(5399..6250)
                     /gene="ispE"
                     /locus_tag="JNZ89_003209"
     CDS             complement(5399..6250)
                     /gene="ispE"
                     /locus_tag="JNZ89_003209"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HAY8936992.1"
                     /translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE
                     LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG
                     GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
                     TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR
                     FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLS
                     PLHRAML"
     gene            complement(6250..6873)
                     /gene="lolB"
                     /locus_tag="JNZ89_003210"
     CDS             complement(6250..6873)
                     /gene="lolB"
                     /locus_tag="JNZ89_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HAY8936993.1"
                     /translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ
                     DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
                     VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI
                     TYSQNGKNWKVVYGGYDTKTHPAMPANMELTDGGQRIKLKMDNWIVK"
     gene            7087..8343
                     /gene="hemA"
                     /locus_tag="JNZ89_003211"
     CDS             7087..8343
                     /gene="hemA"
                     /locus_tag="JNZ89_003211"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HAY8936994.1"
                     /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG
                     VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR
                     VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA
                     SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
                     AQILADEVGAEVIALSEIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
                     VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA
                     WLRAQSASETIREYRSQAEHVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP
                     TKSLQQAARDGDNERLNILRDSLGLE"
     gene            8385..9467
                     /gene="prfA"
                     /locus_tag="JNZ89_003212"
     CDS             8385..9467
                     /gene="prfA"
                     /locus_tag="JNZ89_003212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HAY8936995.1"
                     /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ
                     LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLP
                     KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK
                     EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN
                     PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
                     RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME
                     GKLDMLIEPIIQEHQADQLAALSEQE"
     gene            9467..10300
                     /gene="prmC"
                     /locus_tag="JNZ89_003213"
     CDS             9467..10300
                     /gene="prmC"
                     /locus_tag="JNZ89_003213"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HAY8936996.1"
                     /translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE
                     TQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQA
                     LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN
                     IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV
                     HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY
                     Q"
     gene            10297..10689
                     /locus_tag="JNZ89_003214"
     CDS             10297..10689
                     /locus_tag="JNZ89_003214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB family protein"
                     /protein_id="HAY8936997.1"
                     /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV
                     PPVVDTVLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ
                     ARIIAFPLALVVLYIIIKLATTKVPLLG"
     gene            10693..11502
                     /locus_tag="JNZ89_003215"
     CDS             10693..11502
                     /locus_tag="JNZ89_003215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HAY8936998.1"
                     /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL
                     AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDQVLKNRQGSAVSLG
                     AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
                     SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI
                     RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH"
     gene            11538..12392
                     /gene="kdsA"
                     /locus_tag="JNZ89_003216"
     CDS             11538..12392
                     /gene="kdsA"
                     /locus_tag="JNZ89_003216"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HAY8936999.1"
                     /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
                     TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA
                     QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN
                     EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR
                     AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
                     FEELDTSK"
BASE COUNT         3111 a         3157 c         3239 g         2957 t
ORIGIN      
        1 cggtgaaatg aaaaatccac gcaattgcgt ggattttata tacttttgcg ctcttcatga
       61 gatttagcga aacctcatga gacaataaat taattagacg ttgaaaagga agttcatcac
      121 atcgccatct ttcacgatgt aatctttacc ttctgcacgc attttgcctg cttctttcgc
      181 gccttgttca cctttgtaag tgatgaaatc ttcaaacgag atggtttgtg cacggataaa
      241 gcctttttca aaatcagtat ggattttgcc cgctgcctgc ggcgcggttg ctccaaccgg
      301 aatggtccat gcacgcactt ctttcacccc agcggtgaag taagtttgca ggttcagcag
      361 cttataaccg gcacggatca cacggttcag gcccggctct tccagcccaa gctcctgcat
      421 aaactcgtca cgttcttcgt cgtccagttc ggcaatgtct gcttcaacag cagcacaaac
      481 cggaaccaca acagaacctt ctttcgccgc gatttcacgc acctggtcaa gatatgggtt
      541 gttttcaaaa ccgtcttcgt tgacgttggc gatgtacatt gttggtttca gcgtcaggaa
      601 gctcaggtaa cgaatagccg ctttctcttc agcgcttaaa tccagcgcgc gcagcatacc
      661 tgcattttcc aactggggca ggcatttttc caggaccgcc agctcagctt tcgcgtcttt
      721 atcgccacct ttggctttct tctgtacgcg atgaatcgca cgttcgcagg tgtcgaggtc
      781 tgccagcgcc agttcggtgt tgataacttc aatatcgtca gccgggttaa ctttgccgga
      841 aacgtgaatg atgttgtcat tttcaaagca gcgaacaacg tgaccgatcg cttcggtttc
      901 acggatgttg gtcaggaact ggttacccag accttcgcct ttcgatgcgc cttttaccag
      961 accggcgata tcgacaaatt ccatggtcgt gggaagcgta cgctgcggtt ttacgatttc
     1021 agccagttga tccaggcgag gatcaggcat tggtacgacg cctgtgttcg gctcaatggt
     1081 gcagaatgga aagttggccg cttcaatacc ggctttggtc agcgcgttga acagggtaga
     1141 tttcccgacg ttgggcaaac cgacgatacc gcatttgaat cccatgattt aaatcacctt
     1201 aatatcttaa taatcaacct gttattgcta acagattgca gaaatggaaa taactttgcc
     1261 tattatacac ggcactcggc aaaaatgccg cagacaacga cttattgcgc tttaaaggcg
     1321 tgcaatcggt tcgttgcttt ggtcaagcca tctgtaaacc acatttcagt acaacgcgcc
     1381 gcttcgtcaa tggcttcatc aattaacttc tgttcactaa caggcggttt gcctaacaca
     1441 aaaccgacaa ctttattttt atcgcccgga tgaccgattc cgatgcgtaa acggtgaaag
     1501 ttagggttat tacccaattt actgatgatg tctttcagtc cattgtgacc accatggcca
     1561 ccgcccaatt taaatttggc gacgccagga ggcagatcca gttcgtcgtg ggccaccaga
     1621 atttcgtccg gattaatgcg gaaaaaactg gccatcgccg caacggcttt gccgctgaga
     1681 ttcataaatg tagtcgggac taacaggcgg acatcttcgc ctccaagagt gactcgcgaa
     1741 gtataaccaa agaatttagc ctcttcgcgc agcggagcgc gcaaacgctc tgccagtaag
     1801 tcaacgaacc aggcaccagc attatgtcgc gttgcggcgt attcagcacc ggggttcgcc
     1861 aggccgacaa tcaatttaat cgtcacgttt ttttgtcctg agtgtgtaca taactggcgc
     1921 gtagtttact ggttgcgacc ccgcttgaca aaaaactgcg tatcaaatgc agataacgta
     1981 ataattgcct gagtgggcta ttagaaagtc aaggtgttca ggcgtttatt tgtaaagttt
     2041 tgttgaaata agggttgtaa ttgtgatcac gcccgcacat aacccacagg gtgttgtcta
     2101 tactttacac ataaggaaga ggggtattcc ctgttacaac ccagaaagtt ccggaggtga
     2161 catatgaaac gcaaaaacgc ttcgttactc ggtaacgtgc tcatggggtt gggtctggtg
     2221 gtaatggtgg tcggcgtggg gtattcaatc ctcaaccagt taccacagtt taatatgccc
     2281 cagtatttcg cacatggtgc agtgctaagt attttcgtcg gtgccattct ctggctggcg
     2341 ggtgcccgtg ttggcgggca tgaacaggtg tgcgaccgtt actggtgggt tcgccactat
     2401 gacaaacgtt gccgccgtag cgataatcgc cgtcatagct aacaaataat gcagtttgct
     2461 gaccagtcag tttgcgctga ctggtcaatc tcgtacttat aaatccgcca tcgccgcgcg
     2521 acgattcggg aagaacgcga ggcgtcccga gattggttga atgcctgcgc gagccatagt
     2581 gcgcagtggc tggaattcca cgttgcacac gcgcagttca catccttcgg gcagacgctt
     2641 cacaaaacgc tggaacgcat caagaccacc agcatcaagt accggaacgg catcccactt
     2701 cagaatcaca atccgtttgc cttcaagacg tgactccagg tccgtgaaca agccttcagc
     2761 agcagcaaaa aacagcgggc caataacgcg cagtaccaga acatcgtctg gaacatctac
     2821 gactaccggt gccaggcgag tcatacgtgc gatacgacgc ataaacagca gcgatgccag
     2881 cacgatcccc acgctgatgg caataaccat atcaaacagc acggtcagcg acatgcacag
     2941 cagcatgaca atgatgtcat ctttcggtgc atgacgcagc aagtcgacca ctttatgcgc
     3001 ttcactcatg ttccacgcca ccatcaacag cagggctgcc atagcggaaa gcggcagcca
     3061 ggagagcagc ggtgccagta ccagcagggc aagaataacc agaatagagt ggatcaccgc
     3121 tgagataggg gaagttgccc cggcacggac gttagcggca gaacgcgcga tggcagctgt
     3181 agcggtaata ccaccaaaga atggagcgat aatattcccc agtccctgtc caaccagttc
     3241 gctgttcgcc ttgtgtttcg tcccggtcat accatccagt accacggcgc agagcagaga
     3301 ttcgattgcg ccgagcattg ccattgagaa tgccgcaggc agcagtgtgc gaatagaatc
     3361 ccaggttagc gtgaattctg aattaggcag atcccacggc agcaccagtt gcggcagcag
     3421 ttgcggaata ccgttaccct gagaaccatc ggccaggacg tagtggaatt gcgaaccgat
     3481 ggtagcaaca tgtccgccga gcaggttaac aatccccatc accgcgcaac cagccagcaa
     3541 ggccggaagg tgaccgggta aacgaatgcc cagacgcggc caaaaaacaa gaatacctag
     3601 cgtcacaatg ccaatggcag catcacccac attaatggtc ggcagcgcca taaataatgc
     3661 gccgactttt tgtagataat gttccgggac atgggccatt tgcagaccga gaaaatcttt
     3721 aatctgcatg gtaccgatgg tgatcccgat acccgaggtg aaacctaagg tgacggaaac
     3781 cggaatatac tcaatcaggc gaccaaagcg tgccagaccc atcagaatca aaaagatccc
     3841 cgacagcaag gccgcaacca gcagtcctgc cagtccaaac tgttgcgaca cgggatagat
     3901 aattaccaca aatgccgcag tcggaccgga aacgctaaag cgtgacccac ccgtcagagc
     3961 aatgacaatc cccgcaacag ctgcggtata taaaccgtac tggggtgcca caccactacc
     4021 aatagccaac gccatcgcca gcgggatagc aataatcccg acggttatcc cggcaatcag
     4081 gtcacgggta aaccgtgcgg cagtatattt ttctttccag caagcgtcga tcagagcgcg
     4141 gaaaggcatc acatgtgagg aaaatatttt gttcacaata atgtttcatc cgtgagcgca
     4201 tcatctgtca actaaatggc aggtgaagga ggcataggtc atacaaatgg atattacaga
     4261 caaaaaaacc cgccgcagcg ggtctttgag ccgggttcga ttagtgttcg aacatggcag
     4321 agatcgattc ttcgttgctg atacgacgaa tcgcttcggc cagcatacct gacagggtca
     4381 gagtacgcac gttcggcagt gatttgattt catcgctcag cggaatggta tcgcagacaa
     4441 cgacttcatc aattacagag ttacgcaggt tgttcgccgc gttgccagag aagatcgggt
     4501 gagtcgcgta cgcaaataca cgtttagcac cacgttcttt cagagcttca gcagctttac
     4561 acagcgtacc gccagtgtcg atcatatcat cgaccagtac gcagtcacga cctgcaacgt
     4621 caccgatgat atgcatcacc tgggaaacgt tcgcacgcgg acgacgtttg tcgatgattg
     4681 ccatatcggt atcgttcagc agcttagcga tagcgcgggc acgcacaacg ccgccgatgt
     4741 ccggagaaac cacaattggg ttatccagat tcagctgcag catgtcttcc agcaggatcg
     4801 ggctaccaaa tacgttatca accggaacgt cgaagaaacc ctgaatctgt tcagcgtgca
     4861 gatccactgt cagcacacgg tcaacaccga cgctggagag gaagtctgca accactttcg
     4921 cagtgattgg tacacgagcg gaacggacgc gacggtcctg gcgcgcatag ccaaagtagg
     4981 ggataacagc ggtgatacga cctgcggaag cacgacgcag ggcatcaacc ataacgacta
     5041 attccatcag gttgtcgtta gtaggggcac aagtggactg gatgatgaaa atatcaccac
     5101 cgcgtacatt ttcattaatt tgtacgctga cttcgccatc gctaaagcga cctacagcgg
     5161 cgtcgccgag tgaagtgtac aggcggttgg caatacgttg tgctagttcc ggggtggcgt
     5221 taccagcaaa aagcttcata tcaggcacga gaagaacctc aggcatgcgt ccattggtgg
     5281 aaagaatctg ccgaaaactg tgcgggccag gcatgatcct ttccaggcag tgtattaaag
     5341 agcgcgatgc aacgtctgga acaaggtgac gttgtcaccg aaactcagct tgcccggctt
     5401 aaagcatggc tctgtgcaat ggggaaagat taacgccttt cgccacaaag ccattgagcc
     5461 attccggggc ttgctctagc acctggcggg cttcagactc tgtatcaaat tcagcaaaga
     5521 cacaggcccc tgtcccagtc aggcgcgacg gggcgtattc taacagccag gaaagcaccg
     5581 catcaacctc gcgaaaacgt tttcttgcga taacctcgca atcattgctg aattcacatt
     5641 ttagcaacgt ttctattgac ctttttggcg tattgcgcgg gagttcagga tctttaaaaa
     5701 tcaccggagt cggaatactt acaccagggt gcgccaccag ataccacttc tctggcggat
     5761 ccaccggcgt tagtatttca ccaacgcctt cggcaaacgc ggcatgcccc cgaacaaaga
     5821 caggaacatc tgcgcccagc gtcagcccca tttccgccag ctcatccatg cttagcccgc
     5881 attgccagag atgatttaat gccaccagga ccgtcgcggc attggatgaa ccaccgccga
     5941 gaccgccgcc catcggcaaa cgcttgtcaa tgctgatatt cgcaccgctt cccgtcggaa
     6001 gacgcccgct gtctgccgca gttttcatca acaatcgcgc tgcgcgaacg atcaggttat
     6061 cttcatgttc cacgccttca acgggcgtta acagacgaat atccccatcg tcacgaagct
     6121 caatgctgat ggtgtcgccg taatcaagaa actgaaacag cgtttgcagc gtgtggtaac
     6181 catccgcacg ctgaccggta atgtataaaa acagattaag ttttgccgga gagggccact
     6241 gtgtccgcat tatttcacta tccagttatc catttttaac ttgatgcgtt gaccaccgtc
     6301 ggtgagttcc atattggctg gcatcgcagg atgcgttttg gtgtcataac caccataaac
     6361 aaccttccag tttttgccat tctggctgta ggtaatttcg ctcaggcggt actggtcgtc
     6421 cagtttgtag tcggttgcat cacccggtaa acctaaaatc cactggcgca agctgttgag
     6481 cggaattggc attccggtca atttgccaat catctcttcg gcgtcatcgg cggtataacg
     6541 ctgaccttta ttgtcgacta actgcacgtt acccggttga gcattcagct ccagttccgt
     6601 gctgcccaat gggttagtga gcagcagacg gtagcgatcc tggccggttt gctgccagaa
     6661 aaagcgggcg tacacttttt gttggtcaga aatataagcg aacgcgccgc gagtctgata
     6721 ctgattaaga ttgcgcacgt cttgctgatg ctgacgccat tgtggcgaat ccgggctttt
     6781 gccaggacct ttgggcgtgg taacggaaca ggcagtgagc acaagagcag ccagcggtag
     6841 caggcggata agacgaaaat cgggcagggg catagtgatg acaagtcctt gagatacgtt
     6901 gcagttataa cccttaatgc tagcgttacc gtccgctatc gtctatgttc aagttgtctt
     6961 aattgccaga atctaacggc tttcggcaat tactccaaaa gggggcgctc tcttttattg
     7021 atcttacgca tcctgtatga tgcaagcaga ctaactctat caacgttggt attatttccc
     7081 gcagacatga cccttttagc actcggtatc aaccataaaa cggcacctgt atcgctgcga
     7141 gaacgtgtat cgttttcgcc ggataagctc gatcaggcgc ttgacagcct gcttgcgcag
     7201 ccgatggtgc agggcggcgt ggtgctgtcg acgtgcaacc gcacggaact ttatcttagc
     7261 gttgaagagc aggataacct gcaagaggcg ttaatccgct ggctttgcga ttatcacaat
     7321 cttaatgaag aagatctgcg taaaagcctc tactggcatc aggataacga cgcggttagc
     7381 catttaatgc gtgttgccag cggcctggat tcactggttc ttggggagcc gcagatcctc
     7441 ggtcaggtta aaaaagcgtt tgccgattcg caaaaaggtc atatgaaggc cagcgaactg
     7501 gaacgcatgt tccagaaatc tttctctgta gcgaaacgcg ttcgcactga aacagatatc
     7561 ggtgccagtg ctgtgtctgt cgcttttgcg gcttgtacgc tggcgcggca gatctttgaa
     7621 tcgctctcta cggtcacagt gttgctggta ggcgcgggcg aaaccatcga gctggtagcg
     7681 cgtcatctgc gcgaacataa agtacagaag atgattatcg ccaaccgcac tcgcgaacgt
     7741 gcccaaattc tggcagatga agttggcgcg gaagtgattg ccctgagtga gatcgacgaa
     7801 cgtctgcgcg aagccgatat catcatcagt tccaccgcca gcccgttacc gattatcggg
     7861 aaaggcatgg tggagcgcgc attaaaaagt cgtcgtaacc aaccaatgct gttggtggat
     7921 attgccgttc cgcgcgatgt tgagccggaa gttggcaaac tggcgaatgc ttatctttat
     7981 agtgtggacg atctgcaaag catcatttcg cacaacctgg cgcagcgtaa agccgcagcg
     8041 gttgaggcgg aaactattgt cgctcaggaa accagcgaat ttatggcgtg gctgcgagca
     8101 caaagcgcca gcgaaaccat tcgcgagtat cgcagccagg cagagcacgt tcgcgatgag
     8161 ttaaccgcca aagcgttagc ggcccttgag cagggcggcg acgcgcaagc cattatgcag
     8221 gatctggcat ggaaactgac taaccgcttg atccatgcgc caacgaaatc acttcaacag
     8281 gccgcccgtg acggggataa cgaacgcctg aatattctgc gcgacagcct cgggctggag
     8341 tagcagtaca tcattttctt tttttacagg gtgcatttac gcctatgaag ccttctatcg
     8401 ttgccaaact ggaagccctg catgaacgcc atgaagaagt tcaggcgttg ctgggtgacg
     8461 cgcaaactat cgccgaccag gaacgttttc gcgcattatc acgcgaatat gcgcagttaa
     8521 gtgatgtttc gcgctgtttt accgactggc aacaggttca ggaagatatc gaaaccgcac
     8581 agatgatgct cgatgatcct gaaatgcgtg agatggcgca ggatgaactg cgcaaagcta
     8641 aagaaaaaag cgagcaactg gaacagcaat tacaggttct gttactgcca aaagatcctg
     8701 atgacgaacg taacgccttc ctcgaagtcc gagccggaac cggcggcgac gaagcggcgc
     8761 tgttcgcagg cgatctgttc cgtatgtaca gccgttacgc cgaagcccgc cgctggcggg
     8821 tagaaatcat gagcgccagc gagggtgaac atggtggtta taaagagatc atcgccaaaa
     8881 ttagcggtga tggtgtgtat ggtcgtctga aatttgaatc tggcggtcat cgcgtgcagc
     8941 gtgttcctgc tacggaatcg cagggtcgta ttcatacttc tgcttgtacc gttgcggtaa
     9001 tgccagaact gcctgacgca gaactgccgg acatcaaccc agcagattta cgcattgata
     9061 ctttccgctc gtcaggggcg ggtggtcagc acgttaacac caccgattcg gcaattcgta
     9121 ttactcactt gccgaccggg attgttgttg aatgtcagga tgaacgttca caacataaaa
     9181 acaaagcgaa ggcgctttca gtgctcggtg ctcgcatcca cgctgctgaa atggcaaaac
     9241 gccaacaggc cgaagcgtct acccgtcgta acctgctggg gagtggcgat cgcagcgacc
     9301 gtaaccgtac ttacaatttc ccgcaggggc gcgttaccga tcaccgcatc aacctgacgc
     9361 tctaccgcct ggatgaagtg atggaaggta agctggatat gctgattgaa ccgattatcc
     9421 aggaacatca ggccgaccaa ctggcggcgt tgtccgagca ggaataatgg aatatcaaca
     9481 ctggttacgt gaagcaataa gccaacttca ggcgagcgaa agcccgcggc gtgatgctga
     9541 aatcctgctg gagcatgtta ccggcagagg gcgtactttt attctcgcct ttggtgaaac
     9601 gcagctgact gacgaacaat gtcagcaact tgatgcgcta ctgacacgtc gtcgcgatgg
     9661 tgaacccatt gctcatttaa ccggggtgcg agaattctgg tcgttgccgt tatttgtttc
     9721 gccagcgacc ttaattccgc gcccggatac ggagtgtctg gtggagcagg cactggcgcg
     9781 gttgcctgaa caaccttgcc gtattcttga tctcgggacg ggtaccgggg cgattgcgct
     9841 tgcgctggct agcgagcgcc cggactgcga aattatcgct gtagatcgta tgcctgatgc
     9901 tgtctccctg gcacaacgta atgcccagca tctggcgatc aaaaatatcc acattctgca
     9961 aagcgactgg tttagcgcgc tagccgggca gcagtttgcg atgattgtca gcaatccgcc
    10021 gtatattgac gagcaggacc cacatcttca acaaggcgat gtccgctttg agccgctcac
    10081 tgcgctggtt gcggcagaca gtggaatggc agacatcgtg catatcatcg aacagtcgcg
    10141 taacgcgctg gtatccggcg gctttctgct tctggaacat ggctggcagc agggcgaagc
    10201 ggtgcgacaa gcatttatcc tcgcggggta tcatgacgtc gaaacctgcc gtgactatgg
    10261 tgataacgag cgcgtaacgc tcggccgcta ttatcaatga caagtttttc tacactgctt
    10321 agtgttcatc ttattagtat cgcgctttct gttgggctat taaccttacg tttctggcta
    10381 cgttatcaga agcatccaca ggcatttgct cgctggacgc gcattgtgcc gccggttgtc
    10441 gatacggtgt tattgttaag cggcattgcg ttgatggcta aagcgcacat cctgccattt
    10501 tccgggcagg cacagtggct gactgaaaag ctgtttggag ttatcattta tatcgttttg
    10561 ggttttattg cactcgatta tcgtcgtatg cacagtcagc aggcgcgcat tattgccttc
    10621 ccgctggcgt tggtggtgct gtacatcatc attaaactcg ccaccacaaa agtaccgtta
    10681 ctggggtaag tcatgagatc gttagctgat ttcgaattta ataaagcgcc attgtgcgaa
    10741 ggcatgatcc tggcttgcga agcaatccgc cgcgattttc cctcgcaaga tgtttacgac
    10801 gaactggagc gtctcgttag tctggcgaag gaagaaatca gccagcttct gcctttagaa
    10861 gagcagctgg aaaaactgat cgcgctgttt tacggcgact ggggatttaa agcctcacgc
    10921 ggcgtttatc gtctttccga tgcattatgg ctggaccagg tgttaaagaa tcgacagggc
    10981 agtgcggtat cattaggtgc ggttttatta tgggtcgcga atcgtctcga tttgccgctg
    11041 ctgccggtga ttttccctac gcagctgata ttgcgcattg aatgtccgga tggcgaaatt
    11101 tggctgatta atccttttaa cggtgaatcg ttaagcgaac atatgctgga cgtatggtta
    11161 aagggaaata tcagcccgtc ggcggaactg ttttatgaag accttgatga agctgataac
    11221 attgaggtaa tccgcaaatt gctggataca ctcaaagcct cgttgatgga agaaaatcag
    11281 atggagctgg cgttacgcac cagcgaagct ttattacaat tcaaccctga agatccctat
    11341 gaaattcgcg atcgcgggtt gatttatgcg caactggatt gcgaacacgt tgcgttgaac
    11401 gatttaagtt atttcgttga acagtgtccg gaagacccga tcagcgaaat gatccgtgcg
    11461 caaataaata acatcgcgca taaacatatt gtgctgcatt aattaatcga cattttactc
    11521 aagattaagg cgatcctatg aaacaaaaag tggttagcat tggcgacatc aacgtagcaa
    11581 atgacctgcc gttcgtactg tttggcggta tgaacgtgct ggaatctcgc gatctggcga
    11641 tgcgcatttg cgagcactac gtaactgtga cccagaaact gggtatccct tacgtgttca
    11701 aagcctcttt tgacaaagcc aaccgctcct ccatccactc ttatcgtgga ccgggcctgg
    11761 aagaagggat gaaaatcttc caagagttga agcagacttt tggcgtgaaa attatcaccg
    11821 acgttcacga accaagtcag gcacagcccg ttgctgatgt cgtggatgtg attcagttgc
    11881 cggcgtttct tgctcgccag actgacctgg ttgaagccat ggcgaaaacc ggtgcggtaa
    11941 ttaacgtcaa gaaaccacag tttgtcagcc cgggacagat gggtaatatc gttgataaat
    12001 tcaaagaagg cggcaacgaa aaagtgattc tttgcgatcg tggtgctaac ttcggctatg
    12061 acaacctggt tgtcgatatg ctgggcttca gcattatgaa gaaagtgtct ggtaactcgc
    12121 cggtgatttt cgacgtgacc cacgcactgc aatgccgcga tccgtttggc gcagcttccg
    12181 gtggtcgtcg tgctcaggtg gctgagctgg cacgagccgg tatggcggta ggtctggcgg
    12241 ggctgtttat tgaagcgcat ccggatccgg aacatgcgaa atgtgatggt ccatccgcgc
    12301 tgccgctggc taaactggaa ccgttcctca agcagatgaa agcgattgat gatctggtga
    12361 aaggtttcga agaactggat accagcaagt aatctttttt gcttgaaaaa taaagtctta
    12421 gcgttctgcg ttaagacttt tttcatgggt gccagataca aaaa
//
LOCUS       DADMIB010000128        12051 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.128, whole genome shotgun sequence.
ACCESSION   DADMIB010000128 DADMIB010000000
VERSION     DADMIB010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12051
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.128"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            16..192
                     /locus_tag="JNZ89_003217"
     CDS             16..192
                     /locus_tag="JNZ89_003217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HAY8937000.1"
                     /translation="MSALFFFNAVCIVSDNLLIIESFGEMAYNISYLTRVPGTNTLLA
                     CCCLLRPEEVNSEY"
     gene            182..355
                     /locus_tag="JNZ89_003218"
     CDS             182..355
                     /locus_tag="JNZ89_003218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin, GnsA/GnsB family"
                     /protein_id="HAY8937001.1"
                     /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM
                     TGLESYDVKIKIM"
     gene            complement(404..1476)
                     /locus_tag="JNZ89_003219"
                     /pseudo
     CDS             complement(404..1476)
                     /locus_tag="JNZ89_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415512.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
     gene            complement(1548..4292)
                     /gene="torS"
                     /locus_tag="JNZ89_003220"
     CDS             complement(1548..4292)
                     /gene="torS"
                     /locus_tag="JNZ89_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415513.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system sensor histidine
                     kinase/response regulator TorS"
                     /protein_id="HAY8937002.1"
                     /translation="MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA
                     LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ
                     GFDTTAIEQQEQEISRSLRQQGELVGRRLQLRQQQQQLSQQIVAAADEIARLAQGQAN
                     NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM
                     NLGLEQIQKNAPMLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALY
                     QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL
                     LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG
                     RLMDAFRSTVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA
                     MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG
                     GKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDVPTALMGDPRRIRQVI
                     TNLLSNALRFTDEGQIVLRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG
                     GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGL
                     RLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFDLPDVD
                     GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL
                     QLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIK
                     RAAHQLKSSCSSLGMRIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI
                     "
     gene            4375..5364
                     /gene="torT"
                     /locus_tag="JNZ89_003221"
     CDS             4375..5364
                     /gene="torT"
                     /locus_tag="JNZ89_003221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
                     /protein_id="HAY8937003.1"
                     /translation="MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRA
                     WKLCALYPSLKDSYWLSLNYGMQEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSF
                     PDLQKQVANLPVIELVNALDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMP
                     GPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAG
                     TAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQA
                     IRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK"
     gene            complement(5337..6029)
                     /gene="torR"
                     /locus_tag="JNZ89_003222"
     CDS             complement(5337..6029)
                     /gene="torR"
                     /locus_tag="JNZ89_003222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TorR"
                     /protein_id="HAY8937004.1"
                     /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQT
                     QPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK
                     PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
                     AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ
                     HGECYFLAADVC"
     gene            6149..7321
                     /gene="torC"
                     /locus_tag="JNZ89_003223"
     CDS             6149..7321
                     /gene="torC"
                     /locus_tag="JNZ89_003223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HAY8937005.1"
                     /translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST
                     TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ
                     TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQM
                     KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK
                     GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD
                     VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHG
                     APEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDIAGKAHGDKKEEK"
     gene            7321..9893
                     /gene="torA"
                     /locus_tag="JNZ89_003224"
                     /pseudo
     CDS             7321..9893
                     /gene="torA"
                     /locus_tag="JNZ89_003224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415517.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
     gene            9890..10489
                     /gene="torD"
                     /locus_tag="JNZ89_003225"
     CDS             9890..10489
                     /gene="torD"
                     /locus_tag="JNZ89_003225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HAY8937006.1"
                     /translation="MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL
                     KSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ
                     EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
                     LWQWLPEFAARCHQYDSFGFYAALSQLLLVLVECDHQNK"
     gene            complement(10582..10887)
                     /gene="cbpM"
                     /locus_tag="JNZ89_003226"
     CDS             complement(10582..10887)
                     /gene="cbpM"
                     /locus_tag="JNZ89_003226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HAY8937007.1"
                     /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV
                     FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP"
     gene            complement(10887..11807)
                     /gene="cbpA"
                     /locus_tag="JNZ89_003227"
     CDS             complement(10887..11807)
                     /gene="cbpA"
                     /locus_tag="JNZ89_003227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curved DNA-binding protein"
                     /protein_id="HAY8937008.1"
                     /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
                     RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF
                     GQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL
                     NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS
                     PWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP
                     PKPDENTAALWQQLADAQSSFDPRKDWGKA"
BASE COUNT         2894 a         3094 c         3191 g         2872 t
ORIGIN      
        1 cgtggagcct tttttatatc tgccttattt ttcttcaacg ctgtatgtat agtaagcgat
       61 aacctgttga ttattgaatc tttcggggag atggcttata acatttctta cctgaccagg
      121 gtaccgggaa ccaacacctt actggcgtgt tgctgtcttt taagaccaga agaggttaac
      181 agtgaatatt gaagagttaa aaaaacaagc cgaaacggaa atcgccgact ttatcgcgca
      241 aaaaatcgcc gagctgaaca agaatacagg gaaagaagtc tctgaaattc gcttcaccgc
      301 acgagaaaaa atgaccgggc ttgaaagtta tgatgtcaaa atcaaaataa tgtgattttg
      361 tgaacatcac cccgtgcgag gtgatgttcc gcttgttgct aatttagtga tcaatcattg
      421 gcgcttgtgg aattaagcgt cggtacaatt cctccggcac cgggctttgc catactcccg
      481 catacattgc gtaaccaatc accgcgaaca taatccccag aaccagtagc gtcattaacc
      541 agccagacaa cgcaaaagct tttttatttg ccgcaggttt ttgcagtgaa aaggtcaatg
      601 ttgaggctac cggacatgac tctacgcaag tcatacagcc ggtacattcc actgttcgta
      661 cctgaattaa tttatctacc gggatccgtg atgggcaatt ttttgcgcat ttgccacagc
      721 cgatacaact ttcggcattg cgacgaatct taaacggcga taatagcgaa accacgccca
      781 tcagcgcgcc atatgggcaa agataacgac accaggcatg gcgaataaac aggctggcaa
      841 tcagcaaaac ggtcacgctg attaatgtcg cggtccccat atgacgaaag aaatcgagca
      901 tttttacgtc catcaccacg ctgtagggcg acaacataaa atagtgaatc gcctgagcgg
      961 gcatcaataa cgcgatatag agaaaaaaac tcaacagcaa atacttcacg ccgcgcagag
     1021 gaatatccag ccagcgggga aggacacatt gccgaccaaa cagtttgtta ccgagatcgc
     1081 cgattaattc agaaagcgta ccaaccgggc ataaccatga gcaaaaggcc tttttgagta
     1141 atagactgat gacgataaaa gcgaccaata acagcatcgc ggagcgtgga cggacggtaa
     1201 ctgacctgtt gtaaggctat atttcagatt catcagaccg gcaatcggta gccagccttc
     1261 gatacctccc ggtctggcga caaatgtcgt gctacttgcc gtttcgtaat agcgcaccca
     1321 ataccagaac gtgatggcaa tataaatatt cattgccaac agtaataatt gcgtcgcttt
     1381 acgccaggtc gtggcattgc gccagtcatt ccacggtaat ttgccgcccg tcgtgcctgg
     1441 ccgccgctgc cagcgggttc tttttttctc tgccatgatt ttgccagtcc gttaagttgc
     1501 ataccaaatg ccactatttt agttgttctt aactggctga tattgattca aatcgcgttc
     1561 aggtctttct tatgcaacca tgcttccaga gcggcaacac tgcgtgtaat ttcttcgtgt
     1621 ggaagggggg cagataatgg ctgctgctcc agttgtgcgc atagctggct ggcgatacgc
     1681 attcccaaac tcgagcaact gctttttagc tgatgcgcgg cacgctttat tttctcgcta
     1741 tcctgactgg cgcgggcaat gtcgatttca tcgagaagcg gcagggcatg ttgtgtaaat
     1801 aataccagcc attcgtggat cttctccgtc cccattaact gagcatcttc attgagttgc
     1861 gatacatcca gcgattgatc gttattgact tgcagttgga gatagtgcgc cagtaactga
     1921 ccgagcactt cacgcggcac cggtttaggg ataatcccgc ggaataatga actggtacgc
     1981 tggcgcagcg tttcgtcaat gacatgggcg ctaaagccaa tcaaaaccag cgacggatat
     2041 tgctgtgcca gttgtcgggc aagcgtaatg ccgtcgacat ccggcagatc aaaatccacc
     2101 agtgcggcag caaacggttc gctattttgc agtgtctcta aagcctgcgc ggcattgcca
     2161 acagcaacaa cctgcgcacc actggtgttc agcatctcaa cggtaattcg ctgggttagc
     2221 gggttatctt caattaacag caaacgtaaa ccgtcaagac gcaccgcctg attgactgtt
     2281 tttggcacgg gtgccgtggc aacacgtaac ggcaagcgta aacaaaaaca gcttccaacc
     2341 tccggcgtgc tggtggcgct cagttcgccg cccatcgcct gggccagacg gctactgata
     2401 gtcagtccca gcccggtgcc gccgcgtttg ccgcttacct gcacaaatgg ctggaagatt
     2461 tctgccagtt tcgcgggatc aataccgcag ccgctgtctt ccacttcgac cagccattgc
     2521 tcgccatcag tgcggctacg taaaacgatc tgcccttcgt cagtaaaacg cagggcgttg
     2581 ctcaacaggt tggttataac ctgacgaata cgtcgcggat cgcccattaa cgcggtcggt
     2641 acatcgtcgg caattgctgt tgccaggcga atcgggcgac ctttcacccg tccgctcatt
     2701 aattgcaggg tactttccag cagcgggcgc ggttcaaagg gctcatcgct gaccgaaaca
     2761 ttcttgccac ctgcttcgat agccgaataa tcgagaatat cgttgaggat ggtcagcaac
     2821 gattcgccag agtcggtaat cgcccgcaaa tcatcacgct gggcgttaag tgcggggtta
     2881 tctgccagca gttgagcagt gccgagaata ccgtacagcg gtgtgcggat ctcatggctc
     2941 atcgccgcca gaaaggccga ttttgcctgg ctggcttttt ctgcttccgc ccgtgcctgt
     3001 cggtgttcta tcaccagttc ctgcaattca gctgtacgcg ctttgacctg cgccgccagc
     3061 tgttcacggt ggcgattcag tgcatgaaca gtgctgcgaa acgcatccat cagccgcccg
     3121 atggtatcca gctcccgtac gccagcggtt tccgggaaag gggagtcaat atcaccgtcc
     3181 agcagccgtt gcagcgcctg cgtttgttcg gcaagtggac gcgtgactga gcgataaacc
     3241 acgcgccaaa ggatcagaat cagtgcgcaa agtgaaacca tccccagcaa taacaggctg
     3301 tattgcccgc gtgcactggc tttttccaga tgcgccagtc cgtgctgatt acgcagctca
     3361 atggtgtcga ccagctgact gacttcgcta ctaaactgcg cgaactgggc gatgttattt
     3421 tgtgcgagag tttgtaggtg attgctgatt tcactgtcct gctgatacag cgccagcaaa
     3481 tcgctatatt ggctaacggt agttaacgtt gttgcgacct gcgcacgaac acccggatct
     3541 tcaatgcgta tttgccgacg ttgcagaatt ttcaccgcat tattgagctg cttttccagc
     3601 attggtgcat ttttctggat ctgctccagc cccagattca tcaccatttg ctgcacccgc
     3661 agagcgctaa ggcgcagttc attcatctgg ttaacatact caagatcgat atcaatcagc
     3721 cgatcgagtg cactttcagc agcctgacgc tgatcttgtt cgatcaaatc gtaaatcccg
     3781 gcctgggtcg ctccagcgga agttgtcgca ttattcgcct gaccttgcgc caggcgtgcg
     3841 atctcatcgg cggcagcgac tatctgctga ctgagttgct gttgttgctg gcgtagttgc
     3901 agacgccgcc ccaccagttc cccttgctga cgtaacgaac gggagatctc ctgctcctgt
     3961 tgttcaatag cggtggtatc aaaaccttgt tcccgtaacg cttgcagcaa cgcattaatc
     4021 ttcaggcttt gtgcggtgag cattcgcccc tgcgcctgcc acatcttttc gttatcggca
     4081 ctggtcaggt tctgcgcggc gaaaagttcc caggcgctgg cttcgctcaa ctggcgcgcc
     4141 atattcatgg taggaatcaa tgcctgagtg ttgtcttttt ccacctggct gataaagcgc
     4201 aggttgtacc atcccaccag ggtactggtc agggttaaca gcgccatcag ggcaaagccc
     4261 atccagagtc ttcgggtcag ggttaaattc acggtcggtg cactttaggt gaaaaaggtt
     4321 gagtcgcaaa gcagaatgca tctagcataa agccttatta ttgattaggc tatcatgcgc
     4381 gtactgctat ttttacttct ttcccttttc atgttatcgg cattttcggc tgataacctg
     4441 ttgcgctggc atgatgcgca gcattacacg gtgcaagcct ctacgccgct taaagccaaa
     4501 cgcgcatgga aactgtgcgc gctttatccc agcctgaaag attcatactg gttatcgttg
     4561 aactatggta tgcaggaggc aggcggctac agccagttgg ctacccagca agcacaaatc
     4621 gaccagtgta aacagtgggg cgcagaggcc attttgctcg gtagtagcac tacgtcattt
     4681 cccgacctgc aaaagcaggt agcaaatctg ccggtgatcg aactggtaaa tgctcttgat
     4741 gatcccctgg tgaaaagccg cgttggtgta ccctggtttc agatgggcta tcaacctggg
     4801 cgatatttgg tgcaatgggc gcacggtaaa ccactgaacg tgctgttgat gcccggaccc
     4861 gataatgccg ggggcagtaa agagatggtc gagggttttc gcgcagccat tgccggaagc
     4921 ccggtgcgta ttgttgatat tgcgcttggt gataacgata ttgaaatcca gcgtaacctg
     4981 ttgcaggaga tgctggaacg ccacccagaa atcgacgtcg ttgccggaac agccattgcg
     5041 gcagaggcgg caatgggtga agggcgtaac ctgaaaacgc cgcttaccgt ggtgtcgttt
     5101 tatctttcac atcaggtgta tcgcgggctg aagcggggaa gagtgattat ggctgccagc
     5161 gatcaaatga tctggcaggg ggaactggcg gttgagcagg ccatcaggca attacagggg
     5221 caatcggtgt ctgataatgt cagcccaccg attttagttc tgacgccgaa aaatgccgac
     5281 cgtgaacata ttcgccgctc gctgtcacca gggggatttc gtccggtcta tttttatcag
     5341 cacacatcag cggctaagaa ataacattca ccatgttgcg tcaccagtaa atccgcgctg
     5401 agtttatgac gtaaacgacg aattaacaca tcgacggtgc gcaggtcagg gttttccacc
     5461 cgacgcgcag aaagcatacg tagcagacgt tcacggctga gaatttcgcc cggattcgtc
     5521 acaaatgcca ccaacatttc atactctgcg cgggtcagtt taatcggctc gccatcccgc
     5581 tccagcgtat ggcgcgacac attcaggcaa taaccggcaa agcgatagca gttgtcctga
     5641 gtgtgcggtt gagcttgtcg cgcgaggtcg attcgccaga gcagattttt cacccgtact
     5701 accagttcgc gcagttccag cggtttggtg acgtaatcgt ctgcgcccat ttccagccca
     5761 acaatacggt caatccgatc gctgcgtccg gtaaccagaa taatccccac cgttgagcgt
     5821 tctcgcaggg cgcgggttaa catcaggcca ttttcatcgg gtaagttgat atccagcaga
     5881 attaaatcta ccggctgagt ctgcataatt tcccgcagcc cggcaccgct cgctgtaacg
     5941 gaaacggtat acccctcctg agtgaagtaa gattgtaatc gcgcctgggt aaccggctca
     6001 tcttcaacaa taacaatgtg atgtggcatc agagggtttt actcattctg ttcatattct
     6061 gccgtaagcc gttcatcctg accagtgccg ctgttcatat ttgctcatta agatcgcttc
     6121 actaaaccat aattttacag gggctattat gcggaaactc tggaacgcgc tacgccgacc
     6181 cagtgctcgt tggtcggtac tggcgctggt cgcaattggg attgtgattg gcattgcgct
     6241 gattgtattg ccacacgttg ggatcaaagt caccagcaca accgaatttt gtgtcagttg
     6301 ccacagtatg caaccggtgt atgaagaata taaacagtcg gtgcatttcc agaacgcctc
     6361 cggcgtgcga gctgaatgcc atgactgtca tatcccgccg gatattccag gcatggtgaa
     6421 gcgcaaactg gaagcgagca atgatatcta ccagaccttt attgctcact ccattgatac
     6481 acctgaaaaa ttcgaagcca aacgcgcgga acttgccgag cgtgaatggg cgcgaatgaa
     6541 agaaaacaac tcggcaacct gccgctcctg ccataactac gatgcgatgg atcatgcgaa
     6601 gcagcatcct gaagcggcac gtcagatgaa ggtggcagcg aaagataatc aatcctgcat
     6661 cgactgtcat aaaggtattg cccaccagtt accggatatg agtagcggct tccgtaagca
     6721 gttcgatgag ctgcgcgcca gtgctaatga cagtggtgac acgctgtact ctattgatat
     6781 taagccaatt tatgcggcga aaggcgataa agaagcctct ggttctctgc tgcctgcttc
     6841 ggaagtgaaa gtccttaaac gtgacggcga ctggctgcaa attgaaatta ccggctggac
     6901 ggaaagcgcc ggacgtcagc gtgtactcac ccaattccca ggtaaacgca tctttgttgc
     6961 ctcgattcgt ggtgatgtgc agcagcaggt aaaaacgctg gagaaaacca ccgttgccga
     7021 caccaatacc gagtggagca agttgcaggc cactgcgtgg atgaagaaag gtgatatggt
     7081 gaacgatatc aaaccgatct gggcttatgc ggattcgttg tacaacggca cctgtaacca
     7141 gtgccacggc gcaccggaaa tctctcactt tgatgctaac ggctggattg gcacgctcaa
     7201 cggcatgatt ggctttacca gtctcgataa acgtgaagaa cgcaccttgt tgaaatatct
     7261 gcaaatgaat gcgtctgaca tcgcaggtaa ggctcacggc gataagaagg aagaaaaata
     7321 atgaacaata acgatctctt tcaggcatca cgtcggcgtt ttctggcaca actcggcggc
     7381 ttaacagtcg ccgggatgct ggggccgtca ttgttaacgc cgcgcagtgc gactgcggcg
     7441 caagcggcgg atgtcatctc gaaagagggc attcttaccg ggtcgcactg gggggctatc
     7501 cgcgcgacgg tgaaggatgg tcgctttgtg gcggcaaaac cgttcgaact ggataaatat
     7561 ccgtcgaaaa tgattgccgg attgccggat tgccggattg ccggattgcc ggattgccgg
     7621 atcacgtaca caacgcggcg cgtattcgtt atccgatggt acgcgtggac tggctgcgta
     7681 agcgccatct cagcgatacc tcccagcgcg gtgataaccg ttttgtgcgc gtgagctggg
     7741 atgaagccct cgacatgttc tatgaagaac tggaacgcgt gcagaaaact cacgggccga
     7801 gtgccttgct gaccgccagt ggttggcaat cgacggggat gttccataac gcttcgggga
     7861 tgctggcgaa agctattgcc ttgcatggta atagcgttgg tacgggcgga gattactcta
     7921 ccggtgctgc gcaggtgatc ctgccgcgcg tagtcggttc gatggaagtg tatgaacagc
     7981 aaacctcctg gctgctggta ttgcagaaca gcaaaaccat tatgctgtgg ggctccgatt
     8041 tgctgaaaaa ccagcaagcg aactggtggt gcccggatca cgatgtttat gaatattacg
     8101 agcaactaaa agcgaaagtc gccgccggtg aaattgaggt catcagcatc gatccggttg
     8161 tcacatccac ccatgagtat ctggggcgcg agcatgtgaa gcacattgcg gttaacccgc
     8221 aaactgacgt gccgctgcaa ctggcgctgg cgtatacgct gtacagtgaa aacctgtacg
     8281 acaaaaactt tctcgctaac tactgtgtag gttttgagca gttcctgccg tatctgctgg
     8341 gtgagaaaga cggtcagccg aaagatgccg catgggctga aaaactgacc ggcattgatg
     8401 ccgaaaccat tcgtgggctg gcgcggcaga tggcggcgaa cagaacgcaa attattgctg
     8461 gctggtgcgt gcagcgtatg cagcacggtg aacagtgggc gtggatgatt gtggttctgg
     8521 cggcgatgct ggggcaaatt ggcctgccag gtggtggttt tggttttggc tggcactaca
     8581 acggcgcagg cacgccgggg cgtaaaggcg ttattctgag tggtttctcc ggctctacgt
     8641 cgattccgcc tgttcacgac aacagtgact acaaaggcta cagcagcacc attccgattg
     8701 cccgttttat cgatgcgatc ctcgaaccgg ggaaagtgat caactggaac ggtaaatcgg
     8761 taaaactgcc gccactgaaa atgtgtattt ttgccggaac taacccattc catcgccatc
     8821 agcagatcaa ccgcattatt taaggctggc gcaagctgga aacggttatc gccatagata
     8881 accagtggac ctcaacctgc cgctttgccg atatcgtact gcctgcgacc acgcagtttg
     8941 agcgtaacga tctcgaccag tacggcaacc actccaaccg tggcattatc gccatgaaac
     9001 aggtggtgcc gccgcagttc gaggcgcgca acgactttga tattttccgc gagctgtgcc
     9061 gtcgctttaa tcgcgaagaa gcctttaccg aagggctgga cgaaatgggc tggctgaaac
     9121 gcatctggca ggaaggtgta caacaaggca aaggacgcgg cgttcatctg ccagcgtttg
     9181 atgacttctg gaataacaaa gagtacgtcg agtttgacca tccgcagatg tttgttcgcc
     9241 accaggcatt ccgcgaagat ccggatctcg aaccgctggg cacgccgagt ggcctgattg
     9301 agatctactc gaaaaccatc gccgatatga actacgacga ttgtcagggg catccgatgt
     9361 ggtttgagaa aatcgaacgc tcccacggtg ggcccggctc gcagaagtat ccgttgcatc
     9421 tgcaatctgt gcatccggat ttccgacttc actcgcagtt atgtgagtcg gaaactctgc
     9481 gtcagcaata tacggtagcg ggtaaagagc cagtattcat taacccgcag gatgccagcg
     9541 cgcgcggtat tcgtaacggt gatgtggtac gcgtctttaa cgctcgcggt caggtgttgg
     9601 caggggcagt agtttctgac cgctatgcac ccggcgtggc acgaattcac gaaggggcat
     9661 ggtacgatcc agataaaggc ggcgagcctg gtgcgctgtg caaatacggt aaccccaacg
     9721 tgctgaccat cgacatcggt acttcgcagc tggcgcaggc gaccagtgcg cacactacgc
     9781 tggtggaaat tgagaagtac aatggagcag tggagcaggt gacggcgttt aacggccctg
     9841 tggagatagt ggcgcagtgc gaatatgttc ccgcgtcgca ggtgaaatca tgaccacgct
     9901 gacagcacaa cagattgcct gtgtttacgc ctggctggcg cagttgttct cccgtgaact
     9961 ggacgatgaa caactgacgc aaatcgccag tgcgcagatg gcggaatggt tttcgttgct
    10021 gaaaagcgaa ccgccgctgg ctgcggcggt gaatgagctg gaaaactgta ttgccacgct
    10081 gacagtacgt gacgatgccc gtctggaact ggccgctgac ttttgcggcc tgtttttgat
    10141 gactgataag caggcggcgc tgccgtatgc atcggcctac aaacaggacg agcaagagat
    10201 taaacgcttg ttagttgagg ccgggatgga aaccagcggc aatttcaacg aaccggcaga
    10261 ccatctggcg atctatctcg agttgttgag tcatctgcat ttttcgctgg gagaggggac
    10321 cgttcctgcg cgaagaatcg acagtttgcg gcaaaaaaca ctgacggcgc tgtggcaatg
    10381 gttaccagag tttgctgcgc gttgccatca gtatgacagc tttggttttt acgcggcact
    10441 aagccagtta ttgctggtgt tagtggagtg cgaccaccaa aacaaataac gtcgtttatg
    10501 cgcctgaaaa gacgcgttta gcgtcgcatc aggcattatg gcgcagttgc cggatgcgtc
    10561 atcacatccg gcaaacacac atcacggatg agctacaaac cgggaaagcc gctggcgtag
    10621 caggcggttt tcctgcttca ggtgtgcaat atcatccatt aacgtcagcg ccaccgcgat
    10681 ccccggccag tccagagcca gttcatgacg caggcgtacc gcgcgttgca ccacaatggc
    10741 ggcatggtcg tcaaataccc aggttgtttc ctggatctca cgcggttcaa ccacccccaa
    10801 accgacaatt tcattcaact cctcttcaga gatgccggta tgcaggcaaa attcggtaat
    10861 agtaaaagtc accgtaacat tagccatcat gctttccccc aatctttacg tggatcaaaa
    10921 gacgactggg cgtctgccag ttgctgccac agcgcggcag tgttttcatc cggtttcggc
    10981 ggcatcacga ttttcagtac cgcatacaga tcgccggtct gttttttgct caccagacct
    11041 ttgcctttaa cgcgcaatcg ttgcccggcc tggctgcctg gcgggatagt cagcaaaatg
    11101 ctttctttca gtgttggaac ggtgacttta gcacccagcg ccgcttccca cgggctaacc
    11161 ggcaccacaa tttccagatc ctggccgaca atatcgaaca gcggatgtgg cgcaatatga
    11221 atcaccagcc acaaatcgcc atttggacca ccgttttcgc ccggcgtccc ctggcctttc
    11281 agacggatgc gttgaccatt gccgacgccc gccgggatct tcacattcag cgttttcggg
    11341 atttcctgtt cgatcatgcc aaaggcgtta taaaccggca ggttatagct gatggtacgc
    11401 ttatgctcag tcagcgtttc ttcgaggaat accgccactt cgatttcaat atcgtggccg
    11461 cgtgcggcgg ggcgttgacg gctctggcgg gcatgctgac cgaaaattga cgagaagata
    11521 tcgtcaaaat cttcggcatt aaaactctga ccgtcgccat gatggaactg acggttaaat
    11581 tgcggatcgt tgcgatgttg ccacatctga tcatactcag cgcgacgttg ttcatcactt
    11641 aacacttccc aggcttcagc gacctctttg aagcgggctt cggcatccgg ttctttgctg
    11701 acatcaggat ggtatttacg ggccagtcga cgataggcgg tcttgattgt cttgagatcg
    11761 tccgtcggtt tcacgcccat gatggcgtaa taatccttta attccatagc gttatctcgc
    11821 gtaaatcaac acaaattgaa ggaacccctg taaggtaact cctataagtg tagggtaatc
    11881 ctcaaaattt catatgccaa cacagaatat gttattgaaa tcatcgtgga gaggaggtcg
    11941 ccatcaatat gggttgctga acatatttta aacaggtgaa aaagggtgag cgatttttga
    12001 tagttgaacc aggcacttta agtttaacta gggcgtcatt atttattaaa t
//
LOCUS       DADMIB010000129        11963 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.129, whole genome shotgun sequence.
ACCESSION   DADMIB010000129 DADMIB010000000
VERSION     DADMIB010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11963
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.129"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..410)
                     /locus_tag="JNZ89_003228"
     CDS             complement(<1..410)
                     /locus_tag="JNZ89_003228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY8937009.1"
                     /translation="MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTA
                     LALFDLLKPNYVLTTQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVV
                     VVHENRGLNPYIEDVARRVTKAGYIALAPDGLSSV"
     gene            566..1606
                     /gene="gpr"
                     /locus_tag="JNZ89_003229"
     CDS             566..1606
                     /gene="gpr"
                     /locus_tag="JNZ89_003229"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HAY8937010.1"
                     /translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES
                     QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM
                     WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG
                     KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG
                     CIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ
                     RGQSMAQMALSWLLKDDRVTSVLIGVSRAEQLEENVQALNNLTFSTEELAQIDQHIAD
                     GELNLWQASSDK"
     gene            complement(1646..2140)
                     /locus_tag="JNZ89_003230"
     CDS             complement(1646..2140)
                     /locus_tag="JNZ89_003230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HAY8937011.1"
                     /translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPN
                     IFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDA
                     TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
                     RHNH"
     gene            2331..3215
                     /gene="yghA"
                     /locus_tag="JNZ89_003231"
     CDS             2331..3215
                     /gene="yghA"
                     /locus_tag="JNZ89_003231"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HAY8937012.1"
                     /translation="MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGS
                     GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA
                     VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN
                     VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA
                     EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE
                     SSYVTAEVHGVCGGEHLG"
     gene            complement(3487..3912)
                     /gene="exbD"
                     /locus_tag="JNZ89_003232"
     CDS             complement(3487..3912)
                     /gene="exbD"
                     /locus_tag="JNZ89_003232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HAY8937013.1"
                     /translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD
                     VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTI
                     FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK"
     gene            complement(3919..4653)
                     /gene="exbB"
                     /locus_tag="JNZ89_003233"
     CDS             complement(3919..4653)
                     /gene="exbB"
                     /locus_tag="JNZ89_003233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HAY8937014.1"
                     /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK
                     SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLFNEAQNELELSEGSD
                     DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
                     QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL
                     LQSRDLDLEASAAAHPVRVAQKLRAG"
     gene            4905..6092
                     /gene="metC"
                     /locus_tag="JNZ89_003234"
     CDS             4905..6092
                     /gene="metC"
                     /locus_tag="JNZ89_003234"
                     /EC_number="4.4.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HAY8937015.1"
                     /translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFESMEAKKH
                     ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCALFPCGAAAVANSILAFVEQGD
                     HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT
                     MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA
                     MIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEW
                     LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLSNEELANYLDNFSLF
                     SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA
                     RIV"
     gene            6232..6891
                     /locus_tag="JNZ89_003235"
     CDS             6232..6891
                     /locus_tag="JNZ89_003235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY8937016.1"
                     /translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP
                     ASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGW
                     LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS
                     GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGMLFVVIKKKYCN
                     A"
     gene            complement(6931..7830)
                     /locus_tag="JNZ89_003236"
     CDS             complement(6931..7830)
                     /locus_tag="JNZ89_003236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003024513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY8937017.1"
                     /translation="MKREEICRLLADKVNKLKNKENSLSELLPDVRLLYGETPFARTP
                     VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN
                     VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG
                     KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN
                     MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR
                     EFKRYFGVTPGEDAARMRAMQGN"
     gene            8024..9187
                     /gene="yqhD"
                     /locus_tag="JNZ89_003237"
     CDS             8024..9187
                     /gene="yqhD"
                     /locus_tag="JNZ89_003237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HAY8937018.1"
                     /translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKT
                     GVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTK
                     FIAAADNYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDK
                     QAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAE
                     GILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAM
                     HGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFF
                     EQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR"
     gene            9292..10119
                     /gene="dkgA"
                     /locus_tag="JNZ89_003238"
     CDS             9292..10119
                     /gene="dkgA"
                     /locus_tag="JNZ89_003238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgA"
                     /protein_id="HAY8937019.1"
                     /translation="MANPTVIKLQDGNVMPQLGLGVWQASNEEVITAIQKALEVGYRS
                     IDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYID
                     LYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQ
                     IELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVI
                     RWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG"
     gene            10319..11245
                     /locus_tag="JNZ89_003239"
     CDS             10319..11245
                     /locus_tag="JNZ89_003239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708829.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjP/YqhG family protein"
                     /protein_id="HAY8937020.1"
                     /translation="MKIILLFLAALASFTVHAQPPSQTVEQTVRQIYQNYKSDASTPY
                     FGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTD
                     ADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLA
                     ALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDM
                     QIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQR
                     REGKWEIADFIRPNSGSLLKQIEAKTAARLKQ"
     gene            11296..11553
                     /gene="yqhH"
                     /locus_tag="JNZ89_003240"
     CDS             11296..11553
                     /gene="yqhH"
                     /locus_tag="JNZ89_003240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YqhH"
                     /protein_id="HAY8937021.1"
                     /translation="MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLE
                     QDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE"
BASE COUNT         3093 a         3041 c         2983 g         2846 t
ORIGIN      
        1 acggaactta agccgtcagg tgccagggcg atataccccg ccttcgtcac tcgccgtgcc
       61 acatcttcga tatacggatt cagtccacga ttctcatgca ccaccaccac ggctggcgtt
      121 ttgccgctca tttttgcggg tttcaccaga taaccccgta cctcgccgtg accatttggc
      181 gaaggatacg tgatgtactc agcaacaatc tccgggtcgg taaactctac ctgagtcgtc
      241 agcacataat ttggcttgag caaatcaaac aacgctaatg ccgtcatccc gcccaccgca
      301 tacttcgccg caaggttgag gaactcacgt ttcgaaattt tcccgtgagc gtaatagtcg
      361 tagtaatcca acaactcttg tgggaaatct ttggcggtta aacgcggcat cgttgcattc
      421 ctcaactggt gttttttaag caaagcataa gcgcgtgttt ttgcccagtt tttcgtcact
      481 ctgtgagcca gactacggga tacgcgctgg cgaatcgcta aactagaaac attgtttcga
      541 aattgaacgg tggaaaggag aggtcatggt ctggttagcg aatcccgaac gttacgggca
      601 gatgcagtac cgctattgcg gaaaaagtgg tttacgcctg cccgcgttat cgctcggttt
      661 atggcacaat ttcggtcacg ttaacgcgct ggaatcacag cgtgcaatcc tgcgtaaagc
      721 gtttgattta ggcattacgc actttgattt agccaacaat tacgggccgc ctccaggaag
      781 cgcagaagag aactttggtc gcctgctgcg ggaggatttt gccgcttatc gcgatgaact
      841 gattatctct accaaggctg gctacgatat gtggcccggc ccttacggct ctggcggttc
      901 acgtaaatac ctgctcgcca gcctcgacca aagcctgaag cgtatggggc ttgagtatgt
      961 cgatatcttt tactctcatc gcgtcgatga aaatacgccg atggaagaaa ccgcctctgc
     1021 gctggctcat gcggtacaaa gcggtaaggc gctgtatgtc gggatctcct cttactcgcc
     1081 agagcggacg caaaaaatgg tcgagttgct gcacgagtgg aaaattccgc ttttaattca
     1141 tcaaccttcg tacaatttac tgaaccgctg ggtggataaa agcggcctgc tggataccct
     1201 gcaaaataac ggcgtgggct gtattgcctt tactcctctg gctcagggat tgctgaccgg
     1261 aaaatatctc aacggcattc cgcaagattc acggatgcat cgtgaaggga ataaagttcg
     1321 tggtctgacg ccgaaaatgc ttaccgaagc caacctcaac agcctgcgct tattgaatga
     1381 aatggcacag cagcgtggac aatcaatggc gcaaatggcg ttaagctggt tgctgaaaga
     1441 tgatcgcgtg acgtcggtat tgattggtgt cagccgcgcg gagcaactag aggagaacgt
     1501 gcaggcgctg aataatctga catttagcac cgaggagctg gcgcagattg atcagcatat
     1561 cgccgatggc gagctgaatc tgtggcaggc gtcttccgat aaatgacctg ttaataacgg
     1621 gcgcgcgaac cgcgcccgaa tcagatcagt gattatgacg agtcagtcgg tcaagatagc
     1681 ccatcacaaa tgcagagagc acaaacgtca gatggataat gacgtaccac atcagtttgt
     1741 tatccgggac atttttcgca tccataaaga cgcgcagtaa gtgaatggaa gaaattgcca
     1801 caatcgacgc tgctactttg tttttcagcg acgttgcgtc cattttcccc agccagttca
     1861 gcttctcttt gttctcggag atatccagct gcgagacgaa attctcataa ccggaaaaca
     1921 tcaccatcac cagcaaaccg ccaaccagcg tcatatccac cagcgacagc aacacgagga
     1981 tcaaatctga ttccgccatc gagaagatat tcggcagtac gtgaataatc tcctggaaga
     2041 acttcagcgc cagggcaact aacgccagcg aaaggccaaa gtacacgggg gcaagcagcc
     2101 agcgagaagc atacattgca ttttcaagaa aacgttccat acattcctgt cgtgtagtta
     2161 aaacgggcaa cagtatatcg caattgagta aacagcacgc aacagcaaat caacatatac
     2221 gttaaacctt tgtcgcataa ttctgaggtt tagggatctt cctggttccc ttatcaacgc
     2281 atcgagagcg tctaccctta aaagacgttg aacctgaagg gagaaaaaca atgtctcatt
     2341 taaaagaccc gactacgcag tattacactg gtgaatatcc caaacagaaa caaccgacgc
     2401 caggcatcca ggcgaagatg acaccggtac cggattgcgg cgagaaaacc tatgttggta
     2461 gcggtcgcct gaaagatcgt aaagcactgg tgacaggggg cgattccgga ataggtcgcg
     2521 ctgccgccat cgcttacgcg cgtgaagggg ctgacgtggc gatcagttat cttcccgtgg
     2581 aagaagaaga cgctcaggat gtgaaaaaga tcattgaaga atgcggacgc aaagccgttc
     2641 tgctgccagg cgatttaagc gatgagaaat tcgcccgttc gctggttcac gaagcgcaca
     2701 aggcgttagg cgggctggat attatggcgc tggtcgccgg gaaacaggtt gccattccgg
     2761 atattgcaga cctcaccagc gaacagtttc aaaagacctt tgccattaac gttttcgcgc
     2821 tgttctggct aacccaggaa gcgatccccc tgctaccgaa aggtgcaagt atcatcacca
     2881 cttcgtcaat ccaggcatac cagccaagtc cgcatttact ggactatgcg gctacgaagg
     2941 cggcgattct gaactacagc cgtggcctgg caaaacaggt cgcggagaaa ggtattcggg
     3001 tgaatattgt cgcgccaggc cctatctgga cggcactgca aatttccggc ggacaaacgc
     3061 aggataagat cccgcagttt ggtcagcaaa cgccgatgaa gcgtgcgggg caaccggcgg
     3121 aactggcccc tgtatatgtt tatctggcaa gtcaggagtc gagctacgtc accgcagaag
     3181 tgcacggtgt gtgcggcggc gagcatttag gttaaaaaaa tgcccggttg tgaaaagcaa
     3241 ccgggcatca ttgtgaattc actcttacct gatgtggcga aaacgcctta tccgcctaca
     3301 aacgcatgaa gattcaacat gttgcaatag attttgtagg cctgataagc gtagcgcatc
     3361 aggcattgag cacctaatgc cggatgcggc gtgaacgcct tatccggcct acaaacgcac
     3421 gaagattcaa catgttgcaa tagattttgt aggcctgatg agcgtagcgc atcaggcaat
     3481 tctactttac ttcgctttgg cggtttcttc gccgaccaga cctatcttca ggtaacccgc
     3541 ctgatgcagc gtatccatta ccttcatcaa cgtctcgtaa tcgacggttt tatccgctcg
     3601 gaagaagatg gtggtgtctt tcttgccttc ggttaacgca ttcaacgccg taatcattgt
     3661 ttcatcggtg accggatcgt taccgataaa catcgagttg tctgccttca ccgacagata
     3721 aaccggtttt tccgggcgcg gctgcggcgt gctggtagaa gcaggcaagt tcaccttcac
     3781 atctaccgtc gctaacggtg ccgccaccat aaagataatc agcagaacca acatcacgtc
     3841 gataaacggc gtcacgttga tatcatgcat ttcgccgtta tcgtcgaggt tttcgttaag
     3901 atgcattgcc atcggatatt atcctgcgcg taatttttgt gcgacacgaa ccggatgcgc
     3961 agcggcgctg gcttccagat ccaggtcacg gctttgcagc aacaatacct gcgctgcaac
     4021 atcacccagc atcgctttaa agccgccaat ctggcgtgca aatacgttat agataacgac
     4081 cgcaggaatc gctgccacga ggccgattgc cgttgctaac agagcttctg cgatacccgg
     4141 cgcaacgact gccaggttag tggtctgcgt ttgcgcgata ccaataaagc tgttcatgat
     4201 gccccagacc gtaccaaaca gaccaacgaa cggagaaatc gcgccgatgg ttgccagata
     4261 gccgttaccg cggcccattt gacgacccac tgcggcgacc cgacgctcca gacggaagct
     4321 ggtacgttct ttaatacctt cgttatcgtc gctgccttct gacagttcca gctcattctg
     4381 cgcttcattg aacaaatgca ggcttaagct tttgctacca aaatcagcgg cgatatcgtt
     4441 ggcctggttt aaggaacgcg cttcagccag cagttgctgc tcgcgcttta ggcgacgctt
     4501 ctgattgaag aactctacgc tcttactgaa gaagattgcc caggtgacta cggaggccaa
     4561 aataagccca atcatcacgc acttaacgac aatatcggcg tgctgataca taccccagac
     4621 ggaaaggtct gtctgcatta aattattacc cactgtgtat ctccaggacg caagtcacaa
     4681 aatctgcgca taataatatc aaaacgacgt cgaattgata gtcattctca ttactatttg
     4741 catactgccg tacctttgct ttcttttcct tgcgtttacg cagtaaaaaa gtcaccagca
     4801 cgccatttgc gaaaattttc tgctttatgc caattcttca ggatgcgccc gcgaatattc
     4861 atgctagttt agacatccag acgtataaaa acaggaatcc cgacatggcg gacaaaaagc
     4921 ttgatactca actggtgaat gcaggacgca gcaaaaaata cactcttggc gcggtaaata
     4981 gcgtgattca gcgcgcttct tcgctggtat ttgagagtat ggaagccaaa aagcacgcga
     5041 cgcgcaatcg cgccaatggc gagttgttct atggacggcg cggaacgtta acccattttt
     5101 ccttacaaca agcgatgtgt gaactggaag gtggcgcagg ctgcgcgcta tttccctgcg
     5161 gggcggcagc ggttgctaat tcgattcttg cttttgtcga acagggcgat catgtgttga
     5221 tgaccaacac tgcctatgaa ccgagtcagg atttctgtag caaaatcctc agcaaactgg
     5281 gcgtaacgac atcgtggttt gatccgctga ttggtgccga tatcgttaag catctgcagc
     5341 caaacactaa aatcgtgttt ctggaatcgc caggctccat caccatggaa gtccacgacg
     5401 ttccggcgat tgttgccgcc gtacgcagtg tggtgccgga tgccatcatt atgatcgaca
     5461 acacctgggc agccggtgtg ctgtttaagg cactggattt tggcatcgat gtttctattc
     5521 aagccgccac caaatatctg gttgggcatt cagatgcgat gattggcact gccgtgtgca
     5581 atgcccgttg ctgggagcag ctacgggaaa acgcctatct gatgggccag atggtcgatg
     5641 ccgataccgc ctatataacc agccgtggcc tgcgcacatt aggtgtgcgt ttgcgtcaac
     5701 atcatgaaag cagtctgaaa gtggctgaat ggctggcaga acatccgcaa gtagcgcgag
     5761 ttaaccaccc tgctctgcct ggcagtaaag gacacgaatt ctggaaacga gactttacag
     5821 gtagcagcgg gctgttttcc tttgtgctta agaaaaaact cagtaatgaa gagctggcga
     5881 actatctgga taacttcagt ttattcagca tggcctactc gtggggcggg tatgaatcgt
     5941 tgatcctggc gaatcaacca gaacatatcg ccgccattcg cccacaaggc gagatcgatt
     6001 ttagcgggac cttgattcgc ctgcatattg gtctggaaga tgtcgacgat ctgattgccg
     6061 atctggacgc cggttttgcg cgaattgtat aacattgcca cttttggaca attttgcaga
     6121 catttaattg tgaaaagtct taaattgttg cgtccgggat caaggcgtcc cggacgaatc
     6181 aggagtacaa taggcagata aaggcttaaa cgctgttcca caggaaagtc catggctgtt
     6241 attcaagata tcatcgctgc gctctggcaa cacgactttg ccgcgctggc ggatcctcat
     6301 attgttagcg ttgtttactt tgtcatgttt gccacgctgt ttttagaaaa cggcctgctg
     6361 cccgcctcat ttttgccagg cgacagcttg ttgatactgg caggcgcatt gattgcccag
     6421 ggggttatgg attttctgcc tacgattgcg attctgaccg ccgcagcaag tctgggctgc
     6481 tggctaagtt atattcaggg gcgctggtta gggaatacca aaacggtgaa aggctggctg
     6541 gcacagcttc ctgctaaata tcaccagcgc gccacctgca tgtttgaccg ccacggtctg
     6601 ctggcgctgc tggctggacg ttttcttgca tttgtccgta cgctgctgcc aaccatggcg
     6661 ggaatttccg gtctgccaaa ccgccgcttc cagtttttca actggttaag tggattgctg
     6721 tgggtcagcg tggtaaccag ttttggctat gccttaagta tgattccgtt cgttaaacgc
     6781 catgaagatc aggtaatgac gttcctgatg atcctgccaa ttgccttgtt aaccgctggc
     6841 ttgttaggca tgctgtttgt ggtgattaaa aaaaaatact gtaacgcctg acgattttcc
     6901 ccgttcccgg ctgctgtacc gggaacgtat ttaattcccc tgcatcgccc gcattcttgc
     6961 cgcatcttcc cccggcgtca caccgaagta acgtttaaac tcacggctaa attgcgatgc
     7021 gctttcatag ccgacgcgca tcgctgctgc gctggccttc atgccgtcat ggatgatcat
     7081 catccgcgcc ttatgcagac ggtaattctt caaatactgc aacggcgagg tgctggtgac
     7141 agacttaaaa ttatggtgga acgccgatac gctcatgttg gcttctgccg ccagttgctc
     7201 gacgctcagg ttttcggtgt atttattctc aatccgtttc agcacgcggc taatcagact
     7261 gaagtgagtc tggcgactga ccagcgccag taacgcgccg ccgcaaggtc cggtcagcac
     7321 gtagtacaga atttcgcgga tgatctgttt gccgagaata cgcgcatcca gtggtcgctc
     7381 catcacgtcg agtaaccgct ccgccgcgca taaaatctct tctgataacg tggcggagtt
     7441 aatcccgctg gctgccatcg acggctggaa atgctcatct tcgccaatgt ccatcaacag
     7501 ttcctgtaac tgcaaaatat cgacattgag acgcaaccct gccagcggca cctctgacgt
     7561 ggcataggtt tcgcactcaa acggcaacgg caccgtcagc agcaggtatt cattggcatc
     7621 ataacgaaac acgcgttcat tgatataacc gattttatgc ccggaaaaga gaattatgat
     7681 gccaggctcg tacatcaccg gtgtacgtgc gaaaggcgtc tcaccataca acaaacgcac
     7741 atcgggcaac agttctgaca aactattttc tttatttttc agtttattaa ctttatccgc
     7801 cagcaagcgg caaatctctt cacgtttcat atcgcgtaat ttcttaggaa taatgcggca
     7861 atttgattgt gcgcaatttt gtagcatttc tccagcactc tggagaaata ggcaagacat
     7921 tggcagaaat gagcattgag agccagggcg ctggcgatca caatgaaaaa catcaggcag
     7981 atcgttctct gccctcatat tggcccagca aagggagcaa gtaatgaaca actttaatct
     8041 gcacacccca acccgcattc tgtttggtaa aggcgcaatc gctggtttac gcgaacaaat
     8101 tcctcacgat gctcgcgtat tgattaccta cggtggcggc agcgtgaaaa aaaccggcgt
     8161 tctcgatcaa gttctggatg ccctgaaagg catggacgtg ctggaatttg gcggtattga
     8221 gccaaacccg gcttatgaaa cgctgatgaa cgccgtgaaa ctggttcgcg aacagaaagt
     8281 gactttcctg ctggcggttg gcggcggttc tgtactggac ggcaccaaat ttatcgccgc
     8341 agcggataac tatccggaaa atatcgatcc gtggcacatt ctgcaaacgg gcggtaaaga
     8401 gattaaaagc gccatcccga tgggctgtgt gctgacgctg ccagcaaccg gttcagaatc
     8461 caacgcaggc gcggtgatct cccgtaaaac cactggcgac aagcaggcgt tccattctgc
     8521 ccatgttcag ccggtatttg ccgtgctcga tccggtttat acctacaccc tgccgccgcg
     8581 tcaggtggct aacggcgtag tggacgcctt tgtacacacc gtggaacagt atgttaccaa
     8641 accggttgat gccaaaattc aggaccgttt cgcagaaggc attttgctga cgctgatcga
     8701 agatggtccg aaagccctga aagagccaga aaactacgat gtgcgcgcca acgtcatgtg
     8761 ggcggcgacg caggcgctga acggtttgat tggcgctggc gtaccgcagg actgggcaac
     8821 gcatatgctg ggccacgaac tgactgcgat gcacggtctg gatcacgcgc aaacactggc
     8881 tatcgtcctg cctgcactgt ggaatgaaaa acgcgatacc aagcgcgcta agctgctgca
     8941 atatgctgaa cgcgtctgga acatcactga aggttccgac gatgagcgta ttgacgccgc
     9001 gattgccgca acccgcaatt tctttgagca attaggcgtg ccgacccacc tctccgacta
     9061 cggtctggac ggcagctcca tcccggcttt gctgaaaaaa ctggaagagc acggcatgac
     9121 ccaactgggc gaaaatcatg acattacgtt ggatgtcagc cgccgtatat acgaagccgc
     9181 ccgctaagct ttttacgcct caaactttcg ttttcgggca tttcgtccag acttaagttc
     9241 acaacacctc accggagcct gctccggtga gttcatataa aggaggaacg tatggctaat
     9301 ccaaccgtta ttaagctaca ggatggcaat gtcatgcccc agctgggact gggcgtctgg
     9361 caagcaagta atgaggaagt aatcaccgcc attcaaaaag cgttagaagt gggttatcgc
     9421 tcgattgata ccgccgcggc ctacaagaac gaagaaggtg tcggcaaagc cctgaaaaat
     9481 gcctcagtca acagagaaga actgttcatc accactaagc tgtggaacga cgaccacaag
     9541 cgcccccgcg aagccctgct cgacagcctg aaaaaactcc agcttgatta tatcgacctc
     9601 tacttaatgc actggcccgt tcccgctatc gaccattatg tcgaagcatg gaaaggcatg
     9661 atcgaattgc aaaaagaggg attaatcaaa agcatcggcg tgtgcaactt ccagatccat
     9721 cacctgcaac gcctgattga tgaaactggc gtgacgcctg tgataaacca gatcgaactt
     9781 catccgctga tgcaacaacg ccagctacac gcctggaacg cgacacacaa aatccagacc
     9841 gaatcctgga gcccattagc gcaaggaggg aaaggcgttt tcgatcagaa agtcattcgc
     9901 gatctggcag ataaatacgg caaaaccccg gcgcagattg ttatccgctg gcatctggat
     9961 agcggcctgg tggtgatccc gaaatcggtc acaccttcac gtattgccga aaactttgat
    10021 gtctgggatt tccgtctcga caaagacgaa ctcggcgaaa ttgcaaaact cgatcagggc
    10081 aagcgtctcg gtcccgatcc tgaccagttc ggcggctaac atgcaaattc tcccggtggc
    10141 ggtaatgttc cgctaccgga cttttcagaa atcatttatt cccctcgcgt cccgcccgtt
    10201 gttactcttc cttgttcagg aatgccaaat ataaggacat catcatgcag agccggaagc
    10261 tcttaaaaga acaactcatc tatatccggg ataaacgcaa cggagaggtg aaaaacagat
    10321 gaaaataata cttctgtttt tagcagccct ggcaagtttt accgtacacg cgcagcctcc
    10381 ttcacagacc gtagaacaaa cagtccggca gatttatcag aactataaat cagatgccag
    10441 tacgccttat ttcggtgaaa ccggagagcg ggcgataact tcagcgcgta ttcaacaggc
    10501 gcttaccctg aacgacaatc ttacgctgcc gggcaatatt ggctggctgg attatgatcc
    10561 ggtttgtgat tgtcaggatt ttggcgatct ggtgctagaa agcgttgcga taacccaaac
    10621 tgacgccgat catgccgatg ccgttgtgcg ctttcgtatc tttaaagatg ataaagaaaa
    10681 gaccacgcag acactgaaaa tggtggcgga aaatggtcgt tgggtcattg acgatattgt
    10741 cagcaatcat ggcagtgtct tacaagcagt taatagcgag aatgaaaaaa cgctggccgc
    10801 tttagcttcg ttgcaaaaag aacagccgga agcctttgtt gccgaactct ttgaacatat
    10861 tgctgattat agctggccgt ggacgtgggt ggtttccgac tcttaccgcc aggcggttaa
    10921 tgccttctat aaaaccacct tcaagacggc caataatccc gatgaagata tgcaaataga
    10981 acggcaattt atttacgaca atccgatctg ttttggcgaa gagtcgctat tttcacgcgt
    11041 tgatgaaatt cgagtcctgg agaaaaccgc cgattccgcc cgcattcatg ttcgttttac
    11101 gctgaccaat ggcaacaacg aagagcaaga actggtttta cagcggcgcg aaggcaagtg
    11161 ggaaatcgct gattttatcc gcccgaacag cggcagccta cttaagcaga ttgaggcaaa
    11221 aactgccgcc agattaaagc aatgagctga attaaataac aattagccgg aacaataaat
    11281 aaaagggaac actatatgaa aacgattttc accgtgggag ctgttgttct ggcaacctgc
    11341 ttgctcagtg gctgcgtcaa tgagcaaaag gtcaatcagc tggcgagcaa tgtgcaaaca
    11401 ttaaatgcca aaatcgcccg gcttgagcag gatatgaaag cactacgccc acaaatctat
    11461 gctgccaaat ccgaagctaa cagagccaat acgcgtcttg atgcacagga ctattttgat
    11521 tgcctgcgct gcttgcgtat gtacgcagaa tgataaaaaa atccccggca gcatgtcagt
    11581 tgccgggtta taggctgttt gctaaaaaaa gccaaacata aggacatgat tatgcgacgc
    11641 tggcacacct gtttttttat tctgctgttc tgtggcttca gcggaaacgt gttgtgcaaa
    11701 gaatcgatta atgaagcgat agaacgtttg taccaaccat tgaccagtaa tgacgatata
    11761 ccaataaccg atgaattcag tctcgatttg cgaagtaata tgagcgctac tcctggcaaa
    11821 atgacaccct ggctgaataa taatcttttg tgtcgctgtg tcgatgacgc tttcgtttct
    11881 gcagaaataa tccaaagcac acacctaaat ggcggccgaa cgcatgtact gttgcagctg
    11941 gttatcaaac aaaatcgcac aga
//
LOCUS       DADMIB010000130        11926 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.130, whole genome shotgun sequence.
ACCESSION   DADMIB010000130 DADMIB010000000
VERSION     DADMIB010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11926
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.130"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            216..1325
                     /gene="livk"
                     /locus_tag="JNZ89_003241"
     CDS             216..1325
                     /gene="livk"
                     /locus_tag="JNZ89_003241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter substrate-binding protein LivK"
                     /protein_id="HAY8937022.1"
                     /translation="MKRNAKTIIAGMIALAISHTAMADDIKVAVVGAMSGPIAQWGDM
                     EFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVK
                     PQRIAIIHDKQQYGEGLARSVQDGLKAANANVVFFDGITAGEKDFSALIARLKKENID
                     FVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNASLSNIAGDAAEGMLVTMPKRYD
                     QDPANQGIVDALKADKKDPSGPYVWITYAAVQSLATALERTGSDEPLALVKDLKANGA
                     NTVIGPLNWDEKGDLKGFDFGVFQWHADGSSTAAK"
     gene            1373..2299
                     /gene="livH"
                     /locus_tag="JNZ89_003242"
     CDS             1373..2299
                     /gene="livH"
                     /locus_tag="JNZ89_003242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010436488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivH"
                     /protein_id="HAY8937023.1"
                     /translation="MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHG
                     EVYMIGSYVSFMIIAALMMMGIDTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNS
                     KRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWVVGHSENFSASITTMQAVI
                     WIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAV
                     AGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGIAEALSSAYLS
                     TEYKDVVSFALLILVLLVMPTGILGRPEVEKV"
     gene            2296..3573
                     /locus_tag="JNZ89_003243"
     CDS             2296..3573
                     /locus_tag="JNZ89_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HAY8937024.1"
                     /translation="MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDIR
                     WQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVA
                     WPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYY
                     GLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGG
                     PNGISQIPKPTFFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSL
                     FVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQ
                     GFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGG
                     LMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA"
     gene            3570..4337
                     /gene="livG"
                     /locus_tag="JNZ89_003244"
     CDS             3570..4337
                     /gene="livG"
                     /locus_tag="JNZ89_003244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000084170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivG"
                     /protein_id="HAY8937025.1"
                     /translation="MSQPLLSVNGLMMRFGGLLAVNNVNLELYPQEIVSLIGPNGAGK
                     TTVFNCLTGFYKPTGGTILLRDQHLEGLPGQQIARMGVVRTFQHVRLFREMTVIENLL
                     VAQHQQLKTGLFSGLLKTPSFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQR
                     RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVM
                     GISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYLGEA"
     gene            4339..5052
                     /gene="livF"
                     /locus_tag="JNZ89_003245"
     CDS             4339..5052
                     /gene="livF"
                     /locus_tag="JNZ89_003245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter ATP-binding protein LivF"
                     /protein_id="HAY8937026.1"
                     /translation="MEKVMLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGK
                     TTLLGTLCGDPRAASGRIVFDDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLA
                     MGGFFAERDQFQERIKWVYELFPRLHERRVQRAGTMSGGEQQMLAIGRALMSNPRLLL
                     LDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLS
                     DTGDALLANEAVRSAYLGG"
     gene            5449..6120
                     /locus_tag="JNZ89_003246"
     CDS             5449..6120
                     /locus_tag="JNZ89_003246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000803216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HAY8937027.1"
                     /translation="MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSL
                     AQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIK
                     PVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGL
                     DPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGWIQLENRHLPGDRRRHVRRAGSGH
                     HDADL"
     gene            6050..6253
                     /locus_tag="JNZ89_003247"
                     /pseudo
     CDS             6050..6253
                     /locus_tag="JNZ89_003247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000099274.1"
                     /note="with UgpEC is involved in the uptake of
                     glycerol-3-phosphate; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter permease"
     gene            6250..7095
                     /gene="ugpE"
                     /locus_tag="JNZ89_003248"
     CDS             6250..7095
                     /gene="ugpE"
                     /locus_tag="JNZ89_003248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000572177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter permease
                     UgpE"
                     /protein_id="HAY8937028.1"
                     /translation="MIENRPWLTIFSHTMLILGIAVILFPLYVAFVAATLDKQAVYAA
                     PMTLIPGTHLLENIHNIWVNGVGTNSAPFWRMLLNSFVMAFSITLGKITVSMLSAFAI
                     VWFRFPLRNLFFWMIFITLMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATTTF
                     LFRQFFMTLPDELVEAARIDGASPMRFFCDIVFPLSKTNLAALFVITFIYGWNQYLWP
                     LLIITDVDLGTTVAGIKGMIATGEGTTEWNSVMAAMLLTLIPPVVIVLVMQRAFVRGL
                     VDSEK"
     gene            7097..8167
                     /locus_tag="JNZ89_003249"
     CDS             7097..8167
                     /locus_tag="JNZ89_003249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate import ATP-binding
                     protein UgpC"
                     /protein_id="HAY8937029.1"
                     /translation="MAGLKLQAVTKSWDGKTQVIKPLTLDVADGEFIVMVGPSGCGKS
                     TLLRMVAGLERVTEGDIWINDQRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLK
                     IRGMGKQQIAERVKEAARILELDGLLKRRPRELSGGQRQRVAMGRAIVRDPAVFLFDE
                     PLSNLDAKLRVQMRLELQQLHRRLKTTSLYVTHDQVEAMTLAQRVMVMNGGVAEQIGT
                     PVEVYEKPASLFVASFIGSPAMNLLTGRVNNEGTHFELDGGIELPLNGGYRQYAGRKM
                     TLGIRPEHIVLSSQAEGGVPLVMDTLEILGADNLAHGRWGEQKLVVRLAHQERPTAGS
                     TLWLHLAENQLHLFDGETGQRV"
     gene            8164..8907
                     /gene="ugpQ"
                     /locus_tag="JNZ89_003250"
     CDS             8164..8907
                     /gene="ugpQ"
                     /locus_tag="JNZ89_003250"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HAY8937030.1"
                     /translation="MSNWPYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKL
                     SKDGEIFLLHDDNLERTSNGWGVVGELNWQDLLRVDAGSWYSKAFKGEPLPLLSQVAE
                     RCREHGMMANIEIKPTTGTGPLTGKMVALAARQLWAGMTPPLLSSFEIDALEAAQLAA
                     PELPRGLLLDEWRDDWRELTARLGCVSIHLNHKLLDKARVMQLKDAGLRILVYTVNKP
                     QRAAELLRWGVDCICTDAIDVIGPNFTAQ"
     gene            complement(8894..9334)
                     /locus_tag="JNZ89_003251"
     CDS             complement(8894..9334)
                     /locus_tag="JNZ89_003251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2756 family protein"
                     /protein_id="HAY8937031.1"
                     /translation="MKRLLILTALLPFVGFAQPINTLNNPNQPGYQIPSQQRMQTQMQ
                     TQQIQQKGMLNQQLKTQTQLQQQHLENQINNNSQRVLQSQPGERNPARQQMLPNTNGG
                     MLNSNRNPDSSLNQQHMLPERRNGDMLNQPSTPQPDIPLKTIGP"
     gene            9454..11187
                     /gene="ggt"
                     /locus_tag="JNZ89_003252"
     CDS             9454..11187
                     /gene="ggt"
                     /locus_tag="JNZ89_003252"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HAY8937032.1"
                     /translation="MIKPTFLRRVAIAALLSGSCFSAVAAPPVSYGVEEDIFHPVRAK
                     QGMVASVDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSKN
                     GNTTAIDFREMAPAKATRDMFLDDQGNPDSKKSLTSHLASGTPGTVAGFSLALDKYGT
                     MPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHENSKAIFWKEGEPLKKGDK
                     LVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS
                     GDYRGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADR
                     SEYLGDPDFVKVPWQALTNKAYAKSIADQIDINKAQPSSEIRPGKLAPYESNQTTHYS
                     VVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANA
                     VGPNKRPLSSMSPTIVVKDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGMNVAEATNA
                     PRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALKEAMGSTQSIMVGPDGELYGASD
                     PRSVDDLTAGY"
     gene            complement(11225..11509)
                     /locus_tag="JNZ89_003253"
                     /pseudo
     CDS             complement(11225..11509)
                     /locus_tag="JNZ89_003253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417903.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(11709..11864)
                     /locus_tag="JNZ89_003254"
     CDS             complement(11709..11864)
                     /locus_tag="JNZ89_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937033.1"
                     /translation="MEKLTTELHSLSEMDRRHVVSILAEIANGYDDFNDMLIYLEFYP
                     NHKILIS"
BASE COUNT         2707 a         2956 c         3386 g         2877 t
ORIGIN      
        1 aaaggcactt ttttctgttt atctatcaat aaattcagaa tattatctgt tcttaatcga
       61 ctgaaagata gggattttaa tcactattat cacaaaatac tgcgctaaac ccttaatcag
      121 acaggcaaaa acagtgcagt ataaaaaaag aacagtctga tttgttaaca cataaaaaca
      181 aagcaacaca acatcacgaa tggggatttt tgactatgaa acggaatgcg aaaactatca
      241 tcgcagggat gattgcactg gcaatttcac acaccgctat ggctgacgat attaaagtcg
      301 ccgttgtcgg cgcgatgtcc ggcccgattg cccagtgggg cgatatggaa tttaacggcg
      361 cgcgtcaggc gattaaagac attaatgcca aagggggaat taagggcgac aagctggttg
      421 gcgtggaata tgacgacgcc tgcgacccga aacaagccgt tgcggtcgcc aacaaaatcg
      481 ttaatgacgg cattaaatac gttattggtc atctgtgttc ttcttctacc caacctgcat
      541 cagatatcta cgaagacgaa ggtattctga tgatctcacc gggagcgacc aacccggagc
      601 tgacccaacg cggttatcaa cacattatgc gtactgccgg gctggactct tcccaggggc
      661 caacggcggc aaaatacatt cttgagacgg tgaagcccca gcgcatcgcc atcattcacg
      721 acaaacaaca gtatggcgaa gggctggcgc gttcggtgca ggacgggctg aaagcggcta
      781 acgccaacgt cgtcttcttc gacggtatta ccgccgggga gaaagatttc tccgcgctga
      841 tcgcccgcct gaaaaaagaa aacatcgact tcgtttacta cggcggttac tacccggaaa
      901 tggggcagat gctgcgccag gcccgttccg ttggcctgaa aactcagttt atggggccgg
      961 aaggtgtggg taacgcatca ttgtcgaata ttgccggtga tgctgccgaa ggcatgttgg
     1021 tcactatgcc aaaacgctat gaccaggatc cggcaaacca gggcatcgtt gatgcgctga
     1081 aagcagacaa gaaagatccg tccgggcctt atgtctggat cacctacgcg gcggtgcaat
     1141 ctctggcgac tgcccttgag cgtactggca gcgatgagcc gctggcgctg gtgaaagatt
     1201 taaaagctaa cggtgcaaac accgtgattg ggccgctgaa ctgggatgaa aaaggcgatc
     1261 ttaagggatt tgattttggt gtcttccagt ggcacgccga cggttcatcc acggcagcca
     1321 agtgatcatc ccaccgcccg taaaatgcgg gcgggtttag aaaggttacc ttatgtctga
     1381 gcagtttttg tatttcttgc agcagatgtt taacggcgtc acgctgggca gtacctacgc
     1441 gctgatagcc atcggctaca ccatggttta cggcattatc ggcatgatca acttcgccca
     1501 cggcgaggtt tatatgattg gcagctacgt ctcatttatg atcatcgccg cgctgatgat
     1561 gatgggcatt gataccggct ggctgctggt ggcggcggga ttcgtcggcg caatcgtcat
     1621 tgccagcgcc tacggctgga gtatcgaacg ggtagcctat cgcccggtgc gtaactctaa
     1681 gcgcctgatt gcgctcatct cggcaatcgg catgtccatc ttcctgcaaa actacgttag
     1741 cctgactgaa ggttcgcgtg acgtggcgct gcccagtctg tttaacggtc agtgggtggt
     1801 ggggcatagc gaaaacttct ctgcctctat taccaccatg caggcagtga tctggattgt
     1861 tactttcctc gccatgctgg cgctgacgat tttcattcgt tattcccgta tggggcgcgc
     1921 ctgccgtgcc tgcgcggaag atctgaaaat ggcgagcctg cttggcatca acaccgaccg
     1981 ggtgattgct ttgacctttg ttattggcgc ggcgatggcg gcagtggctg gcgtactgct
     2041 cggtcagttc tacggcgtca ttaaccccta tatcggcttt atggccggga tgaaagcctt
     2101 taccgctgcg gtgctcggtg ggattggcag cattccaggg gcgatgattg gtgggctgat
     2161 cctggggatt gcggaggcgc tctcttctgc ctatctgagt acggaatata aggatgtggt
     2221 ttcatttgcc ctgctgattc tggtgctgct ggtgatgccg accggtattc tgggtcgccc
     2281 ggaggtagag aaagtatgaa accgatgcat attgcaatgg cgctgctctc tgccgcgatg
     2341 ttttttgtcc tggcgggcgt ctttatgggc gtgcaactgg agctggatgg caccaaactg
     2401 gtggtcgaca cggcttcaga catccgttgg cagtgggtgt ttatcggcac ggcggtggtc
     2461 tttttcttcc agcttttgcg accggctttc cagaaagggc taaaaagcgt ttccggaccg
     2521 aagtttattc tgcccgcgat tgatggctcc acggtgaagc agaaactgtt cctcgtggcg
     2581 ctgttggtgc ttgcggtggc gtggccgttt atggtgtcac gtgggacggt ggatatcgcc
     2641 actctgacca tgatctacat tatcctcggt ctcgggctga atgtggttgt tggtctttct
     2701 ggtctgctgg tgctggggta cggcggtttt tacgccatcg gcgcttacac ctttgcgctg
     2761 ctcaatcact attacggctt gggcttctgg acttgtctgc cgattgccgg gttaatggca
     2821 gcggcggcgg gcttcctgct cggctttccg gtgctgcgtc tgcgcggtga ttatctggcg
     2881 atcgttaccc tcggcttcgg cgaaattgtg cgcatattgc tgctcaataa caccgaaatt
     2941 accggcggcc cgaacggaat cagtcagatc ccgaaaccga ctttcttcgg ccttgagttc
     3001 agccgtaccg cccgtgaagg cggttgggac acgttcagta atttctttgg cctgaaatac
     3061 gatccctccg atcgcgtcat cttcctgtat ctggtggcgt tgctgctggt ggtgctaagc
     3121 ctgtttgtca ttaaccgcct gctgcggatg ccgctggggc gtgcgtggga agcgttgcgt
     3181 gaagatgaga tcgcctgccg ttcgctgggc ttaagcccgc gtcgtatcaa gctgaccgct
     3241 tttaccatca gtgccgcgtt tgccggtttt gccggaacgc tgtttgctgc gcgccagggc
     3301 tttgtcagcc cggaatcctt cacctttgct gaatcggcgt ttgtactggc gatagtggtg
     3361 ctcggcggta tgggatcgca gtttgcggtg attctggcgg caattttgct ggtggtgtcg
     3421 cgcgagttga tgcgtgattt caacgaatac agcatgttaa tgctcggtgg tttgatggtg
     3481 ctgatgatga tctggcgtcc gcagggcttg ctgcccatga cgcgcccgca actgaagctg
     3541 aaaaacggcg cagcgaaagg agagcaggca tgagtcagcc attattatct gtgaacggcc
     3601 tgatgatgcg cttcggcggc ctgctggcgg tgaacaacgt caatcttgaa ctgtacccgc
     3661 aggagatcgt ctcgttaatc ggtcctaacg gtgccggaaa aaccacggtc tttaactgcc
     3721 tgaccggatt ctacaaaccc actggaggca ccattttact gcgcgatcag catctggaag
     3781 gtttaccggg gcagcaaatt gcccgcatgg gcgtggtgcg taccttccag catgtgcgtc
     3841 tgttccgtga aatgacggtg attgaaaacc tgctggtggc gcagcatcag caactgaaaa
     3901 ccgggctgtt ctctggcctg ttgaaaacgc catccttccg tcgcgcccag agcgaagcgc
     3961 tcgatcgcgc cgcgacctgg cttgagcgca ttggtttgct ggaacacgcc aaccgtcagg
     4021 cgagtaacct ggcctatggt gaccagcgcc gtcttgagat tgcccgctgc atggtgacgc
     4081 agccggagat tttaatgctc gacgaacctg cggcaggtct taacccgaaa gagacgaaag
     4141 agctggatga gctgattgcc gaactgcgca atcatcacaa caccactatc ttgttgattg
     4201 aacacgatat gaagctggtg atgggaattt cggaccgaat ttacgtggtc aatcagggga
     4261 cgccactggc aaacggtacg ccggagcaaa tccgtaataa cccggacgtg atccgtgcct
     4321 atttaggtga ggcataagat ggaaaaagtc atgttgtcct ttgacaaagt cagcgcccac
     4381 tacggcaaaa tccaggcact gcatgaggtg agcctgcata tcaatcaggg cgagattgtc
     4441 acgctgattg gcgcgaacgg ggcggggaaa accaccttgc tcggcacgtt atgcggcgat
     4501 ccgcgcgccg ccagcgggcg aattgtgttt gatgataaag acattaccga ctggcagacg
     4561 gcgaaaatca tgcgcgaagc ggtagcgatt gtcccggaag ggcgtcgcgt cttctcgcgg
     4621 atgacggtgg aagagaacct ggcgatgggc ggcttttttg ccgaacgcga ccagttccag
     4681 gagcgcataa agtgggtgta tgaactgttt ccacgtctgc atgagcgccg tgttcagcgg
     4741 gcaggcacca tgtccggcgg tgagcaacaa atgctggcga ttggtcgcgc gctgatgagc
     4801 aacccgcgtt tgctgctact tgatgagcca tcgctcggtc ttgcgccgat tatcatccag
     4861 caaattttcg acaccatcga gcagctgcgc gagcagggga tgactatctt cctcgtcgag
     4921 cagaacgcca accaggcgct aaagctggcg gatcgcggct acgtgctgga aaacggccat
     4981 gtggtgctct ccgataccgg cgatgcgctg ctggcgaacg aagcagtgag aagtgcgtat
     5041 ttaggcgggt aataacacgt tgattgataa ggagtcaaaa gactcctttg agacaggtga
     5101 caaatgtaaa attgcctgat gcgctgcgct tatcaggcct actgggtgag ttgcaatata
     5161 ttgaatttgc acgatcttgt aggccggata aggcgtttac gccgcatccg gcatgaaacg
     5221 atgagtaatc tgtagagttt gattcagacc ttctattttt ccgcttatcc gtgccccatc
     5281 tcccattttc cctcacccac gccgtcaccg ccttgtcatc tttctgacac cttactatct
     5341 tacaaatgta acaaaaaagt tatttttctg taattcgagc atgtcatgtt accccgcgag
     5401 cataaaacgc gtgaattcgc gcattcggta caacaagaga gataaacgat gaaaccgtta
     5461 cattatacag cttcagcact ggcgctcgga ctggcgttaa tggggaatgc acaggcagtg
     5521 acgaccattc cgttctggca ttctatggaa ggggaactgg gtaaagaggt ggattctctg
     5581 gcccaacgtt ttaacgccga aaatccggat tacaaaattg taccgaccta taaaggcaac
     5641 tacgaacaga atttaagcgc ggggattgcc gcatttcgta ccggcaacgc tccggctatt
     5701 ttgcaggttt atgaagttgg caccgccacc atgatggcat cgaaagccat taaaccggta
     5761 tatgacgtgt ttaaagaggc ggggattcaa ttcgatgagt cgcagtttgt gccgacggtt
     5821 tccggttact actccgacag caaaacgggc cacttactct cccagccatt caacagctcg
     5881 actcccgttc tctattacaa caaagacgcc ttcaagaaag cggggttaga cccggaacag
     5941 ccgccgaaaa cctggcagga tctggcggac tatgccgcga aactgaaagc ctccggcatg
     6001 aagtgcggct acgccagcgg ctggcagggc tggatccaac tggaaaatcg acaccttccc
     6061 ggtgatcgac gccgccacgt ccggcgggcc ggttcaggcc accacgacgc tgatttataa
     6121 gatctaccgc gaaggtttta ccggactgga tctggcttcg tctgccgcac agtcggtggt
     6181 gttgatgttc ctcgtcatcg tgctgacggt ggtgcagttc cgctatgttg aaagcaaggt
     6241 gcgttaccaa tgattgagaa ccgtccgtgg ctgacgatat tcagccatac catgctgatc
     6301 ctcgggatcg cggtgattct cttcccgctg tacgtggcgt ttgtcgcggc gacgctggat
     6361 aaacaggccg tctatgccgc gccgatgacg ctcatccccg gcacacatct gctggaaaat
     6421 atccacaaca tctgggttaa cggggtaggt acgaatagcg cgccgttctg gcggatgttg
     6481 cttaacagct ttgtgatggc gttcagcatt acgctcggca aaattaccgt ctcgatgctc
     6541 tcggcatttg ccattgtctg gtttcgtttt ccgctacgta acctcttctt ctggatgatt
     6601 tttatcaccc tgatgctgcc ggttgaagta cgtatcttcc cgacggtgga agtcatcgcc
     6661 aacctgaaga tgctcgacag ctacgccggt ttaacgctgc cgctgatggc ctcggcgacc
     6721 accacgtttc tgtttcgcca gttctttatg acgctgccgg atgaactggt ggaagcggcg
     6781 cggatcgacg gcgcatcgcc aatgcgcttc ttttgcgaca tcgtttttcc gctctccaaa
     6841 actaatctgg cggcgctgtt tgtgatcacc tttatttacg gctggaacca gtatttgtgg
     6901 ccgttgttga ttattaccga cgtggatctc ggcaccaccg tggcagggat caaagggatg
     6961 atcgccactg gcgaaggcac cacggaatgg aactcagtga tggcggcgat gttgttaacc
     7021 ctgatcccac cagtagtgat tgttttagtg atgcagcgtg ccttcgtgcg cggcctggtc
     7081 gatagtgaga aataagatgg caggactgaa attacaggca gtaaccaaaa gctgggatgg
     7141 caaaacccag gtcattaaac cgctgaccct tgatgtggct gatggcgaat ttatcgtgat
     7201 ggtcgggccg tctggctgcg ggaaatcgac gctgctgcgt atggttgccg ggctggagcg
     7261 ggtgaccgaa ggcgatatct ggatcaacga ccagcgcgtg actgaaatgg agccgaaaga
     7321 tcgcgggatt gcgatggtgt tccagaacta cgcgctttat ccgcatatga gcgtcgaaga
     7381 aaacatggcg tgggggctta aaattcgcgg catgggcaag cagcaaattg ccgagcgcgt
     7441 taaagaagcg gcgcgcattc tggagctgga cggtctgctc aaacgtcgcc cgcgtgagct
     7501 atccggcggt cagcgtcagc gtgtagcgat gggccgcgcg attgtgcgcg atccggcggt
     7561 gttcctgttt gatgagccgc tctctaacct cgatgccaag ctgcgcgtgc agatgcgtct
     7621 tgaactgcaa cagttgcacc gtcgcctgaa aacgacttca ctctacgtta ctcacgatca
     7681 ggttgaagcg atgacgctcg cccagcgagt aatggtgatg aacggcggcg ttgccgaaca
     7741 gattggcaca ccagttgaag tctacgaaaa gcccgccagc ctgtttgtag cgagttttat
     7801 cggcagtccg gcgatgaacc tgctgacagg ccgcgtgaat aacgaaggca cgcatttcga
     7861 actggacggc ggtattgagc tgccgctaaa cggtggctac cgtcagtatg ccgggcgtaa
     7921 aatgactctc ggcattcgcc cggaacatat tgtgctaagc tcgcaggcag aaggcggcgt
     7981 acctctggtg atggacacgc tggagatcct cggcgcagat aacctggcgc acggacgctg
     8041 gggcgagcag aagctggtgg tgcgactggc gcatcaggag cgcccgacgg caggcagcac
     8101 gctgtggctg catctggcgg aaaatcagct gcatcttttt gatggtgaaa caggacaacg
     8161 agtatgagta actggcctta tccccgcatc gtcgctcatc gtggcggcgg taagctggcc
     8221 ccggaaaaca ccctggcggc aatcgacgtc ggggcaaaat acggtcataa gatgatcgaa
     8281 tttgacgcga agttatcgaa agatggcgag atcttcctgc tccatgacga caatctcgaa
     8341 cgcaccagca acggctgggg cgtcgtgggt gaactgaact ggcaggattt actgcgcgtg
     8401 gatgcgggca gttggtacag caaagcgttt aaaggtgagc cgctgccgtt gctttcgcag
     8461 gtggcggaac gctgtcgcga acatgggatg atggcgaata tcgaaatcaa acccaccact
     8521 ggcactggac cattaacggg caaaatggtg gcgctggcgg cacgccaact gtgggccggt
     8581 atgacgccgc cgctgctgtc atcgtttgag attgatgctt tagaagctgc acagctggcg
     8641 gcaccggaac tgccgcgtgg tttattgctt gatgagtggc gcgacgactg gcgcgaactg
     8701 accgcgcggc tgggctgcgt ctctattcat ctcaatcata agttactcga taaagcgcga
     8761 gtgatgcagt tgaaagacgc cggattacgg attctggttt ataccgtcaa taaaccccag
     8821 cgcgcggcag agttgctgcg ctggggcgtg gattgcatct gtaccgatgc gattgacgtg
     8881 attggtccga actttacggc ccaatagttt tcaacggaat gtcaggctgc ggcgtgctgg
     8941 gctgattcag catgtcgccg tttctcctct ccggcagcat atgctgctga ttcaacgaac
     9001 tatccggatt acggttgctg tttaacatcc cgccgttggt gttgggcagc atttgctgcc
     9061 gggcgggatt tcgctccccc ggctgtgact gcaacacccg ctgagaatta ttgtttatct
     9121 ggttttctaa atgctgctgt tgcaactgag tttgcgtttt cagttgctga ttcagcatcc
     9181 ctttttgctg gatttgctga gtttgcatct gggtttgcat ccgctgctgg ctgggtatct
     9241 gataccccgg ctggttaggg ttgttcagag tattaatggg ctgtgcaaag ccgacaaacg
     9301 gcaggagtgc cgtaagaatc agaagtcgtt tcatcgcgta tcctcctctg aagatatcct
     9361 ttaagtttac tcgcttcccg acaaaacgat gattaattca gagttatata ccaggcttag
     9421 ctggggttgc cccttaatct ctggagaata acgatgataa aaccgacgtt tttacgccgg
     9481 gtagccattg ctgctctgct ctcaggaagt tgttttagcg ccgtcgccgc gcctcctgtt
     9541 tcttacggcg tggaggaaga tatcttccat ccggtacgcg cgaaacaggg gatggtggcg
     9601 tctgtcgatg ccactgccac ccaagtgggg gtagatattc taaaggaggg cgggaatgcc
     9661 gttgatgccg ccgtggcggt gggctacgcg ctggcggtaa cgcatccgca ggcagggaat
     9721 ctgggcggtg gtggttttat gctgatccgc tcgaaaaatg gcaataccac cgctatcgat
     9781 ttccgcgaga tggcacccgc taaagcgacc cgcgatatgt tccttgatga ccagggcaac
     9841 ccggacagca aaaaatcact cacttcgcat ctggcttccg gcacgcccgg tacggtcgct
     9901 ggtttctcgc tggcgttgga taagtacggc actatgccgt tgaacaaagt ggtgcagccc
     9961 gcgttcaaac tggcacgcga tggttttatc gttaacgatg ctttggcaga cgatctcaaa
    10021 acctacggta gcgaagtgtt gccgaatcac gaaaacagca aagctatctt ctggaaagag
    10081 ggcgaaccgc tgaaaaaggg cgacaagctg gtgcaggcga acctggcaaa gagcctggag
    10141 atgattgccg aaaacggccc ggacgaattc tataaaggca cgatagcgga acagattgcc
    10201 caggagatgc agaaaaacgg tggcttgatc actaaagaag atttagcggc gtataaagcg
    10261 gtcgaacgca caccgataag tggcgattat cgcgggtatc aggtttactc catgccaccg
    10321 ccatcctccg gcgggatcca tatcgtacaa atcctcaata ttctggaaaa cttcgatatg
    10381 aagaaatacg gctttggcag cgccgatgcg atgcaaatca tggcagaagc ggagaaatac
    10441 gcctacgccg accgctcgga atatcttggc gacccggatt ttgtcaaagt accgtggcag
    10501 gcgctgacca ataaagccta tgccaaatct attgccgatc aaattgatat caataaagcg
    10561 cagccatcca gcgaaattcg ccccggcaag cttgcgcctt atgagagtaa tcaaactacc
    10621 cattactcag tggtggataa agatggtaac gcggtggcgg tgacctatac gctgaacacc
    10681 accttcggta cgggcattgt cgcgggcgag agcggtattc tgcttaataa tcagatggat
    10741 gatttctccg ctaaaccggg cgtaccgaac gtttacgggc tggtgggcgg tgatgccaac
    10801 gccgtcgggc cgaataaacg tccgctgtcg tcaatgtcac caacgattgt ggtgaaagac
    10861 ggtaaaacct ggctggtcac cggtagccct ggcgggagcc ggatcatcac tacagtgctg
    10921 caaatggtgg tgaatagcat cgattatggc atgaacgtcg ccgaagcgac caatgcgccg
    10981 cgtttccacc atcagtggtt gccggacgag ctgcgtgtcg aaaaagggtt tagcccggat
    11041 acgctcaagc tgctggaagc aaaaggtcag aaagtggcgc tgaaagaggc gatgggcagt
    11101 acacaaagca ttatggttgg gccggacggt gagttgtacg gcgcatccga cccgcgctcg
    11161 gtggatgatt taacggcggg gtactaaggt tagcggccct cttcgtggga agagggctat
    11221 tttgtcaggg caagccgaag gtagcctttt ttatttcgta atcctgtaga tattcttcca
    11281 gcggctttgc cgttcccaga gaatgaattt caccactgtc tttatcaata ataaaaggtg
    11341 cgttaccagc taagcgcgcg gcctcatctc cagtttcgag aaattctcgt gcttcgaaac
    11401 agaaatacca gccctagcta aagcgtccat gtagagtaat gacgaccggg agatctgcat
    11461 catcaaggta atggttcgct ttcgcgaatg cgtcgtgata agtaatcata attataataa
    11521 atattattgt tgagtgttat attattattc ctgtgtgata cattgagcaa agacgcgttc
    11581 atcttcgtca aagatattat taaatgctgg ttttgaaaaa agttcatcgg ataagatata
    11641 gtcacgaaat aagtatctgc taatatttta tgatttcttt ttcagaacgt cgaacgggat
    11701 tttcttattt aagatatcag aatcttatga ttcgggtaaa attctaaata aatcaacatg
    11761 tcattaaaat catcatagcc attagctatt tcggctaaaa tagagactac atgtcttcgg
    11821 tccatctcac ttaaggagtg tagttccgtt gtaagttttt ccatagcttg cactgctaaa
    11881 tttcgaacaa ggaattttct gctggtaatc tctaaaaaga tggcat
//
LOCUS       DADMIB010000131        11892 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.131, whole genome shotgun sequence.
ACCESSION   DADMIB010000131 DADMIB010000000
VERSION     DADMIB010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11892
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.131"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(48..362)
                     /locus_tag="JNZ89_003255"
                     /pseudo
     CDS             complement(48..362)
                     /locus_tag="JNZ89_003255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418152.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
     gene            complement(477..884)
                     /locus_tag="JNZ89_003256"
     CDS             complement(477..884)
                     /locus_tag="JNZ89_003256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HAY8937034.1"
                     /translation="MIIMGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQS
                     GGLGAILSTWLSNQQSNQSVSGEQLESAPGTNAVSDLGQKLGVDTSTASSLLAEQLPK
                     IIDALSPQGEVSSQANNDLLSAGMELLKGKLFR"
     gene            complement(1115..3529)
                     /gene="gyrB"
                     /locus_tag="JNZ89_003257"
     CDS             complement(1115..3529)
                     /gene="gyrB"
                     /locus_tag="JNZ89_003257"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HAY8937035.1"
                     /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
                     DNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
                     KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET
                     EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
                     EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
                     QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
                     RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
                     LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
                     LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
                     HTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQ
                     TVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFI
                     TGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYK
                     GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADLLFTTLMGDAVEPRRAFIEENALK
                     AANIDI"
     gene            complement(3558..4631)
                     /gene="recF"
                     /locus_tag="JNZ89_003258"
     CDS             complement(3558..4631)
                     /gene="recF"
                     /locus_tag="JNZ89_003258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HAY8937036.1"
                     /translation="MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIY
                     TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDG
                     HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWACFHNEPGFFTAWSNLKRLLKQ
                     RNAALRQVTRYEQLRPWDKELIPLVEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF
                     SFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKL
                     LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISA
                     EHVIDMSDENSKMFTVEKGKITD"
     gene            complement(4631..5731)
                     /gene="dnaN"
                     /locus_tag="JNZ89_003259"
     CDS             complement(4631..5731)
                     /gene="dnaN"
                     /locus_tag="JNZ89_003259"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006177590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HAY8937037.1"
                     /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
                     TGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSG
                     RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
                     ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQI
                     GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
                     KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCE
                     NVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL"
     gene            complement(5736..7139)
                     /gene="dnaA"
                     /locus_tag="JNZ89_003260"
     CDS             complement(5736..7139)
                     /gene="dnaA"
                     /locus_tag="JNZ89_003260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HAY8937038.1"
                     /translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
                     RFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVA
                     QTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADN
                     PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA
                     IEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
                     GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVR
                     ELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVA
                     DLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
                     SHDIKEDFSNLIRTLSS"
     gene            7436..7516
                     /locus_tag="JNZ89_003261"
     CDS             7436..7516
                     /locus_tag="JNZ89_003261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937039.1"
                     /translation="MTIDKNWLNRSNKDPGRSLRFTHQPV"
     gene            7746..7886
                     /gene="rpmH"
                     /locus_tag="JNZ89_003262"
     CDS             7746..7886
                     /gene="rpmH"
                     /locus_tag="JNZ89_003262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001686914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HAY8937040.1"
                     /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
                     SK"
     gene            7903..8262
                     /gene="rnpA"
                     /locus_tag="JNZ89_003263"
     CDS             7903..8262
                     /gene="rnpA"
                     /locus_tag="JNZ89_003263"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HAY8937041.1"
                     /translation="MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGH
                     PRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALS
                     EALEKLWRRHCRLARGS"
     gene            8226..8483
                     /gene="yidD"
                     /locus_tag="JNZ89_003264"
     CDS             8226..8483
                     /gene="yidD"
                     /locus_tag="JNZ89_003264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HAY8937042.1"
                     /translation="MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEA
                     LRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH"
     gene            8486..10132
                     /gene="yidC"
                     /locus_tag="JNZ89_003265"
     CDS             8486..10132
                     /gene="yidC"
                     /locus_tag="JNZ89_003265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HAY8937043.1"
                     /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAA
                     GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLET
                     SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNT
                     FTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTF
                     RGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYT
                     ANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLW
                     FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQA
                     MRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAP
                     FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
                     FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS"
     gene            10238..11602
                     /gene="mnmE"
                     /locus_tag="JNZ89_003266"
     CDS             10238..11602
                     /gene="mnmE"
                     /locus_tag="JNZ89_003266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HAY8937044.1"
                     /translation="MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPR
                     YADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPG
                     LRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLV
                     EALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMK
                     VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE
                     ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVR
                     NKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRH
                     LQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSF
                     CIGK"
     gene            11845..>11892
                     /gene="tnaC"
                     /locus_tag="JNZ89_003267"
     CDS             11845..>11892
                     /gene="tnaC"
                     /locus_tag="JNZ89_003267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase leader peptide"
                     /protein_id="HAY8937045.1"
                     /translation="MNILHICVTSKWFNID"
BASE COUNT         2720 a         3255 c         3072 g         2845 t
ORIGIN      
        1 ataaggcgcg gacaggggta tcgcttagtt tttcaatttc ctatacgtga accgacttcg
       61 cgagagagtt tttccaggaa acgatagtcg tcataactga gagcagtttg cgccacggtg
      121 ctaccatcag cggccttctg taccagcgcg ccgttataag taatgcagta gtcgcccggc
      181 tgttccatat gcagctcttt caggtagttg tgaacgcctg cataagggcg acccgtcgtt
      241 agcacgacat tcacgccacg ggcgcgagct gcggcaatcg catttttaac ggcgggtgaa
      301 atggtgtgat cgggcagcag aagggtgcca tccatatcga tagcaatgag tttgatagcc
      361 atgagttccc caggtagatt agttcctgac ccatgctaac gcgattccgc tcaaaaatca
      421 gtacaacacc cgagggaaaa gggggatgca acgcgggttg catgctcccc atttgcttag
      481 cggaagagtt tccctttcag cagttccata cctgcggaaa gcagatcgtt attggcttgt
      541 gaagacactt caccttgcgg tgagagcgca tcaataatct tcggcaattg ttctgccagt
      601 aaactggaag ccgtactggt atccacgcca agtttttgcc cgagatcgga caccgcattt
      661 gtgccgggcg ccgattccag ttgctcgccg ctaactgatt gattgctctg ctgattactc
      721 aaccaggttg agagaatggc ccctaagccg ccactttgca gtttttccag cagcacctga
      781 atgccgccct gctcctcaac ccaacttaaa atagcctgat atttccccgc atcgcctttc
      841 agaaaggcac cgacaacttc atcaaaaagc cccatgataa tcacctgtaa agcgttacgt
      901 gttgacccaa aaagtataga tctgcgggat gataattgcg gattgcagaa ataaaaaggg
      961 cggagatgat ctccgccctt tttttatagc ttcttgccgg atgcggcgtt aacgtcttac
     1021 ctggcctaca aaatcattaa aattcaatac attgcaagat tttcgtaggc ctgataagcg
     1081 tagcgcatca ggcacgctcg catggttaac gccattaaat atcaatattc gccgctttca
     1141 gggcgttctc ttcaataaac gcacgacgcg gttctacggc gtcgcccatc agcgtggtga
     1201 acaacaggtc agcggcaatc gcatccttaa cggtaacgcg cagcatacga cgactttccg
     1261 ggtccatggt ggtttcccac agctgttccg ggttcatctc gcccagacct ttataacgct
     1321 ggatggagag accgcgacga gactctttca ccagccagtc cagcgcctgc tcgaagctgg
     1381 ctaccggctg acgacgctcg ccacgttcga taaatgcatc ttcttccagc aagccacgca
     1441 gtttctcacc cagcgtgcag atacgacgat attcgccacc agtgataaat tcgtgatcca
     1501 gcggatagtc agtatccaca ccgtgggtac gcacgcgaac aatcggctcg aacaggtttt
     1561 gttcggcatt ggtgtggaca tcaaacttcc actggctgcc gtgctgttct ttgtcgttca
     1621 gttcgctgac cagcgcgttc acccagcggg taacggtctg ctcatcagag aggtcggctt
     1681 ccgtcagcgt cggctgatag ataagctctt tcagcattgc tttcggataa cgacgctcca
     1741 tgcggttgat cattttctgc gtcgcgttgt actcagacac cagtttctct aacgcttcgc
     1801 cagccaatgc cggtgcgctg gcgttggtgt gcagcgttgc gccgtccagc gcgatagaga
     1861 tctggtactg atccatcgct tcgtcgtctt taatgtactg ttcctgcttg cctttcttca
     1921 ctttgtacag cggcggctga gcgatgtaga cgtgaccgcg ttcaacgatt tccggcatct
     1981 gacgatagaa gaaggtcaac agcagcgtac gaatgtgcga gccgtcgacg tccgcatcgg
     2041 tcatgatgat gatgctgtga taacgcagtt tgtccgggtt gtactcgtca cgaccgatac
     2101 cacagccaag cgcggtgata agcgtcgcca cttcctgaga agagagcatc ttatcgaagc
     2161 gcgctttctc aacgttgagg attttaccct tcagcggcag aatcgcctgg ttcttgcggt
     2221 tacgcccctg cttcgcagag ccgcccgcgg agtccccttc caccaggtac agttcggaaa
     2281 gcgccggatc gcgttcctgg cagtctgcca gtttgcccgg caggcccgct aagtcgagcg
     2341 cacctttacg gcgggtcatt tcacgcgcgc gacgcgccgc ttcacgggca cgggcagcat
     2401 cgataatttt gccaaccacg attttcgcgt cggttgggtt ttccagcagg tattctgcca
     2461 gcagttcgtt catctgctgt tcaaccgccg atttcacctc agaagaaacc agtttgtctt
     2521 tggtctggga ggagaatttc gggtccggca cttttacgga aacgaccgca atcaggcctt
     2581 cacgcgcatc gtcaccggtg gcgctgactt tggctttttt gctgtagcct tctttgtcca
     2641 tgtaggcgtt cagggtacgg gtcatcgccg cacggaagcc tgccaggtga gtaccgccgt
     2701 cacgctgcgg aatgttgttg gtaaagcagt agatgttttc ctggaagcca tcgttccact
     2761 gcaacgccac ttcgacgcca ataccgtctt tttcggtgga gaagtagaag atattcggat
     2821 ggatcggcgt tttgttcttg ttcagatatt caacgaacgc cttgatgccg ccttcatagt
     2881 ggaagtggtc ttctttgccg tcacgcttgt cgcgcagacg aatggaaacg ccggagttga
     2941 ggaacgacaa ctcacgcaga cgtttcgcca gaatttcata ttcgaactcg gtcacattgg
     3001 tgaaggtttc gaggctgggc cagaaacgca ccatggtgcc ggttttttca gtctcgccgg
     3061 taaccgccag cggagcctgc ggtacaccgt gttcgtagat ctgacggtga attttaccct
     3121 cgcgctggat aaccagctcc agtttttgcg acagggcgtt tactaccgaa acaccaacgc
     3181 cgtgcagacc gccggacact ttataggagt tatcgtcaaa tttaccgcct gcgtgcagaa
     3241 cggtcatgat cacttccgcc gccgatacgc cctcttccgg gtgaataccg gtcggaatgc
     3301 cgcgcccgtc atcctgtaca gagacagagt tatcggcgtg aatggtgacg ataatttctt
     3361 tacagtgacc cgcgagcgct tcgtcgatag cgttatctac cacctcgaat accatgtggt
     3421 gcagaccggt gccgtcatcc gtgtcgccga tatacatacc cgggcgctta cgcaccgcat
     3481 ccagcccttt caggactttg atactggagg agtcataaga attcgacatc aacgtttctc
     3541 gctcatttat acttgggtta atccgttatt ttaccctttt ccacggtaaa catcttcgaa
     3601 ttttcgtccg acatgtctat aacgtgttca gcactgatcg cgctgacaaa gacctgtgat
     3661 tgcgtcgctt ttaagcggct ggcaagcagc ccgcgacgct catcatcaag ctcagaggca
     3721 aaatcatcta tcaggtagag acaccgccgc ccgctttcac gggtgaggaa ctctccttgc
     3781 gccagacgta aggcgcacat caacagctta agctgcccac gcgataaggt atcttccacc
     3841 ggcgcaccgt cggcgcgaat gcgtaagtcc gctttatgcg ggccatgcgc ggtgtaggtt
     3901 agctggcgat cgcgttcaaa attacgttcc agcacctcag catattctgt ctctttctcc
     3961 cagccgcgct ggaaagagaa agtcagagaa aactcaggga gaaattgctt acaagtatcg
     4021 gccatatcag ccgcgatacc ggcgctatac tccgcgcgcc aggtgctgat ttgctccacc
     4081 agcgggatca gctctttatc ccacgggcgt agctgttcgt aacgtgtcac ctggcgcagc
     4141 gccgcattgc gctgcttgag caatcgcttg agattgctcc aggcggtgaa aaatccgggt
     4201 tcgttgtgaa agcatgccca gtcgagaaat gctcttctgt atttggggcc gccgttgagt
     4261 aaagtaaacc cttctggcgt tatcagctgc atcggcatca ggtgcgccag ctccgcgact
     4321 ttatgcccgt cagtaccgtc gatgcggact ttgctgtcgc cttgtttgtc tttggttaag
     4381 ccaatcgccg tctcgcgctc ttcgccctgt aatcgcccat ggagaacaaa tgcctcctgc
     4441 tcatggcgaa tgacgcgacc aatctgcaaa ctgcgaaacg cccgaccatg gccgagcgta
     4501 tagatggctt ccagcacact ggttttgcca ctgccgttgg cacctaccag aaagttaaag
     4561 ccgggagata aggcgagatc cgcggtttcg atattgcgga aatcgcggat caacaagcgg
     4621 gtgagggaca ttacagtctc attggcatga caacataagc cgcgctctgg ctggccgcat
     4681 cttcaatctg cacgctggaa accgaatcgg tcagcatcat gcggacgttt tcgcatttca
     4741 gcgcgttcag aacatccagc acatagctga cgttgaagcc gatttccatc tccgcaccgc
     4801 tataggtaac gtcgaggatc tcttccgctt cttcctgttc cgggttgttg gcagtgattt
     4861 tcagctggtt ttcgctgaca taaagacgta cgccgcggaa tttctcgtta gagagaattg
     4921 ccgcacgggc aaacgcctgc ttgagcagat cgcagccagc ttccagatgt ttgtccgggt
     4981 tcttcggtag aacgcggcgg taatccggga agcgaccatc caccagtttg gaggtgaaga
     5041 taaagtcgcc aacgtgggca cgaatgttat tgctgccaat ctgcacgcgc agcggattgt
     5101 cgccgccgtc gagcatacgc atcagttcaa tcacgccttt acgcggcacg atcaccgaat
     5161 ggcttggcaa agattgacca attggcattg aacagactgc cagacggtga ccatcggtcg
     5221 ctacggtgcg cagttcttcg ccttcggttt caaacagcat accgtttaag taatagcgaa
     5281 catcctgatg cgccatcgaa aactgggtcg cttcaatcag acgcttcatc gtcgcctgcg
     5341 gcagggtaaa ttcgacttcg ctctgccagt catcgaggtt cgggaaatcc gccgctggca
     5401 gggtagacag cgaaaaacgg ctacgcccgg agcgcaccag catccgttca ccttccagct
     5461 gcacggcaat ttccgcgcct tcaggcagac cacggcagat atcaaagaat ttgcgcgccg
     5521 gaacggtcgt tgctcctggc tcgtgtggct gaaccagcgc aacacgtgcc accatttcca
     5581 tctcgagatc agtaccggtc agcgacaacg taccgtcagc aacctgtaac agcagattac
     5641 cgagaatcgg tagcgtagga cgaccaccta acggaccgct cacctgttgt agcggtttta
     5701 ataaatgctc acgttctacg gtaaatttca taggtttacg atgacaatgt tctgattaaa
     5761 tttgaaaaat cttctttgat atcgtggctc tcttcacgca actgctcgat cttacggcag
     5821 gcatgaagca ccgtcgtgtg gtcacgacca ccaaacgcat cgccaatctc cggcagactg
     5881 tggttagtca gctctttcgc cagcgccatc gccatctggc gcggacgcgc caccgagcgg
     5941 gatcgacgct tggaaaggag atccgcgact ttgatcttgt agtactccgc caccgtcttc
     6001 tgaatattgt cgatggtgac cagtttttcc tgcaatgcca gcaagtcgcg cagcgcctca
     6061 cgcacgaagt cgatggtgat cgcccgtccg gtaaagttgg cattggcaat gacgcggttc
     6121 agcgcccctt ccagctcacg tacgttagat cgtagacgct tggcgataaa gaacgccact
     6181 tcgcccggca aacgaatgtc gttttcgtcg gcctttttca tcaggatcgc cacacgggtt
     6241 tccagctctg gcggttcgat cgccacagtc agtccccaac cgaagcggga tttcaaacga
     6301 tcctcaacgc cgttgatctc tttcggatag cgatccgagg tgagaatgat ctgttgatta
     6361 ccttccagca gggcgttgaa ggtatggaaa aactcttcct gagatcgttc tttattagca
     6421 aaaaactgaa tatcgtcgat cagcagtgca tctacggaac ggtagtagcg tttaaactct
     6481 tcgatcgcgt tgttttgcag ggctttaacc atgtcctgaa caaagcgctc ggagtgcata
     6541 taaaccactt tggcattcgg cttgcgcgcc ataatgccgt tacccaccgc atgcagtagg
     6601 tgagttttac ccagacccgt gccgccataa aggaacaacg ggttataggc accgccaggg
     6661 ttatccgcca cctggcgagc cgccgcgcgc gccagttggt tagatttacc ttcaacgaag
     6721 ttatcaaacg tgtgtttgac gtttacgtta gaacgatagg tcggttctgc cggggccggg
     6781 acgttatccc aacctgagcg cgtagaaggc gcagcacgtt gcggctgcgt ttgcgccacc
     6841 tgtgcagggg ccgcgacgtt gctcgtcact gccgcttgtg gcgtttgcgt caccggtttg
     6901 gtgccgactt caaaacgcag ctgtggggca tccgctccgc agaaactggt tagcagtcca
     6961 ttgatattat taaggtactt gtcccgtacc caatcgagga caaaacggtt tggcgcgtac
     7021 agggccagcg tgttatcgct cagttccgcc tgcaatgggc gtatccacat actgaattct
     7081 gtggctggta actcatcctg caatcgggca agacactgct gccaaagcga aagtgacacg
     7141 gcggactcca ctcgaacaaa agtcgataat gactaaggct gaaacattca tgattgttga
     7201 cgtacgtcga aaagaccctg cttgagggtg acgcacgaac cgctgtctgc ggttatatgc
     7261 ccgatcaaga tcctgcaaaa cgatcgggac cgcggatcat agcctaaact gcgcaagaga
     7321 tcttctgttt ctcacagatt ttcccgattt atccacagga ctttccagaa ctcgctaagt
     7381 gtaaacgatc ctgccgcgag gcgggcacga tttacgccac atattgaaaa atttaatgac
     7441 catagacaaa aattggctta atcgatctaa taaagatcca ggacgatcct tgcgctttac
     7501 ccatcagccc gtataatcct ccacccggcg cgccatgctg gtttccactg gtgtgaggtc
     7561 gtacattttc cctgcgaaaa ggtgcggaaa agcgcggtaa ataaggaaag agaattgact
     7621 ccggagtgta caattattac aatccggcct ctttaatcac ccatggcttc ggtgtccatc
     7681 gtttcatttt tcggcggata tccaataaag ccattgaatt tattcaagtt taggtagaaa
     7741 tcgccatgaa acgcactttt caaccgtctg tactgaagcg caaccgttct cacggcttcc
     7801 gtgctcgtat ggctactaaa aatggtcgtc aggttctggc acgtcgtcgt gctaaaggcc
     7861 gcgctcgtct gaccgtttct aagtaatcaa gctaacccct gagtggttaa gctcgcattt
     7921 cccagggagt tacgcttgtt aactcccagt caattcacat tcgtcttcca gcagccacaa
     7981 cgggctggca cgccgcaaat taccattctc ggccgcctga attcgctggg gcatccccgt
     8041 atcggtctta cagtcgccaa gaaaaacgtt cgacgcgccc atgaacgcaa tcggattaaa
     8101 cgtctgacgc gtgaaagctt ccgtctgcgc caacatgaac tcccggctat ggatttcgtg
     8161 gtggtggcga aaaaaggggt tgccgacctc gataaccgtg ctctctcgga agcgttggaa
     8221 aaattatggc gccgccactg tcgcctggct cgcgggtcct gatagccctc attcgggtct
     8281 atcaacgcct gattagtccg ctactcgggc cgcattgtcg tttcactcca acctgttcaa
     8341 gctacggaat tgaggcattg cgcaggtttg gagtgataaa aggcagttgg ttgacggtga
     8401 aacgcgtatt aaaatgccac cctttacacc ctggtggtga cgatcccgtc ccgcccggac
     8461 catttgatac cagagaacac taacgatgga ttcgcaacgc aatcttttag tcatcgcttt
     8521 gctgttcgtg tctttcatga tctggcaagc ctgggagcag gataaaaacc cgcaacctca
     8581 ggcccaacag accacgcaga caacgaccac cgcagcgggt agcgccgccg accagggcgt
     8641 accggccagt ggccagggga aactgatctc ggttaagacc gacgtgcttg atctgaccat
     8701 caacacccgt ggtggtgatg ttgagcaagc tctgctgcct gcttacccga aagagctgaa
     8761 ctctacccag ccgttccagc tgctggaaac ttcaccgcag tttatttatc aggcacagag
     8821 cggtctgacc ggtcgtgatg gcccggataa cccggctaac ggcccgcgtc cgctgtataa
     8881 cgttgaaaaa gacgcttatg tgctggctga aggtcaaaac gaactgcagg tgccgatgac
     8941 gtataccgac gcggcaggca acacgtttac caaaacgttt gtcctgaaac gtggtgatta
     9001 cgctgtcaac gtcaactaca acgtgcagaa cgctggcgag aaaccgctgg aaatctccac
     9061 ctttggtcag ttgaagcaat ccatcactct gccaccgcat ctcgataccg gaagcagcaa
     9121 cttcgcactg cacaccttcc gcggcgcggc gtactccacg cctgacgaga agtacgagaa
     9181 atacaagttc gataccattg ccgataacga aaacctgaac atctcttcga aaggtggttg
     9241 ggtggcaatg ctgcaacagt atttcgcgac ggcgtggatc ccgcataacg acggtaccaa
     9301 caacttctat accgctaatc tgggtaacgg catcgccgct atcggctata aatctcagcc
     9361 ggtactggtt cagcctggtc agactggcgc gatgaacagc accctgtggg ttggcccgga
     9421 aatccaggac aaaatggcag ctgttgctcc gcacctggat ctgaccgttg attacggttg
     9481 gttgtggttc atctctcagc cgctgttcaa actgctgaaa tggatccata gctttgtggg
     9541 taactggggc ttctccatta tcatcatcac ctttatcgtt cgtggcatca tgtacccgct
     9601 gaccaaaacg cagtacacct ccatggcgaa gatgcgtatg ctgcagccga agattcaggc
     9661 aatgcgtgag cgtctgggcg atgacaaaca gcgtatcagc caggaaatga tggcgctgta
     9721 caaagctgag aaggttaacc cgctgggcgg ctgcttcccg ctgctgatcc agatgccaat
     9781 cttcctggcg ttgtactaca tgctgatggg ttccgttgaa ctgcgtcagg caccgtttgc
     9841 actgtggatc cacgacctgt cggcacagga cccgtactac atcctgccga tcctgatggg
     9901 cgtaacgatg ttcttcattc agaagatgtc gccgaccaca gtgaccgacc cgatgcagca
     9961 gaagatcatg acctttatgc cggtcatctt caccgtgttc ttcctgtggt tcccgtcagg
    10021 tctggtgctg tactatatcg tcagcaacct ggtaaccatt attcagcagc agctgattta
    10081 ccgtggtctg gaaaaacgtg gcctgcatag ccgcgagaag aaaaaatcct gattcggtga
    10141 gttttcgcta aaataagggc ggtcagttga ccgccttttt tcttttcgta gggcggataa
    10201 gcaccgcgca tccgccacac aaagcaacag gaacatcatg agcgataatg acactatcgt
    10261 agcccaggcc acgcctccgg gacgtggcgg cgttggcatc ctgcgcatct ccggcttcaa
    10321 agcccgtgaa gttgccgaaa ccgtgctggg taaactgcct aagccgcgct acgccgatta
    10381 tcttccgttt aaagacgccg acggcagcgt gctcgatcag gggattgcgc tatggttccc
    10441 tggcccgaac tcgttcaccg gcgaagatgt gctggaactg caaggtcatg gcggtccggt
    10501 gatcctcgac ctgctgttaa aacgtattct gaccattccc ggcctgcgga ttgctcgccc
    10561 tggtgagttt tccgaacgcg cgtttcttaa cgataaactt gacttagccc aggccgaggc
    10621 gattgccgat cttatcgacg ccagttcgga acaggcggcc cgttcggcac ttaactcgct
    10681 gcaaggcgca ttctccgcac gggttaatca tctggtagaa gccctcaccc acttgcgcat
    10741 ttacgtcgaa gcggcaattg atttccccga tgaagagatc gatttcctct ccgacggaaa
    10801 aattgaagcc cagctcaatg acgttattgc cgatcttgat gcagtgcgtg ctgaagcacg
    10861 tcagggtagt ttgttgcgcg aagggatgaa agtggtgatt gccggacgtc ctaacgccgg
    10921 taaatcgagc ctgttaaacg cgctggcggg gcgtgaagcg gcaatcgtaa ccgatatcgc
    10981 cggaactacg cgtgacgtgc tgcgtgagca tatccacatt gacggaatgc cgctgcatat
    11041 catcgatacc gccgggctac gtgaagccag tgacgaagta gaacgtattg gtatcgagcg
    11101 cgcgtggcag gaaattgaac aggccgaccg cgtgctgttt atggtcgatg gcaccacaac
    11161 agacgccgtg gatccggcag agatctggcc ggaatttatt gcccgtctgc cagcgaaact
    11221 gccgatcacc gtggtgcgca ataaagccga tatcaccggc gaaacgctgg gaatgagtga
    11281 agtgaacggt cacgcgttaa ttcgtctctc ggcaaggact ggtgaaggcg tggacgtgct
    11341 gcgtaaccat ctcaaacaga gcatgggctt tgacaccaac atggaaggcg gcttcctggc
    11401 gcgtcgtcgc cacctacagg cgctggaaca ggcagcggaa catctacaac agggcaaagc
    11461 gcaactgttg ggagcctggg caggtgaact gctggcggaa gagttgcgtc tggcacagca
    11521 gaacttaagc gaaatcaccg gggaatttac ttcagacgac ctgctggggc ggattttctc
    11581 cagcttctgt attggtaagt aaccgcgctt acgaagccgt attctgactg tcagatgcgg
    11641 cttcgcttca ttgttagcac tcctgttatt cctcaaccct ttttttaaac attaaaattc
    11701 ttacgtaatt tataatctta aaaaaagcat ttaatattgc tccccgaacg attgtgattc
    11761 gattcacatt taaacaattt tagaatagac aaaattcttg agtattatac tgtagcctcg
    11821 tgtctttcga ggaataagtg cattatgaat atcttacata tatgtgtgac ctcaaaatgg
    11881 ttcaatatcg ac
//
LOCUS       DADMIB010000132        11794 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.132, whole genome shotgun sequence.
ACCESSION   DADMIB010000132 DADMIB010000000
VERSION     DADMIB010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11794
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.132"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            486..1142
                     /gene="pphA"
                     /locus_tag="JNZ89_003268"
     CDS             486..1142
                     /gene="pphA"
                     /locus_tag="JNZ89_003268"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HAY8937046.1"
                     /translation="MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPW
                     RDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGD
                     WFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQ
                     VLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ
                     "
     gene            complement(1143..1418)
                     /locus_tag="JNZ89_003269"
     CDS             complement(1143..1418)
                     /locus_tag="JNZ89_003269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebW family protein"
                     /protein_id="HAY8937047.1"
                     /translation="MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCE
                     DIVVDVYNTEQQCLYSMSDQRIRQGGCFPIEDFIDGFWRPAQEYGDF"
     gene            complement(1439..1675)
                     /locus_tag="JNZ89_003270"
     CDS             complement(1439..1675)
                     /locus_tag="JNZ89_003270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1480 family protein"
                     /protein_id="HAY8937048.1"
                     /translation="MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAW
                     DAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA"
     gene            complement(1793..3232)
                     /gene="rsmF"
                     /locus_tag="JNZ89_003271"
     CDS             complement(1793..3232)
                     /gene="rsmF"
                     /locus_tag="JNZ89_003271"
                     /EC_number="2.1.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /protein_id="HAY8937049.1"
                     /translation="MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVN
                     TLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEA
                     SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHA
                     NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN
                     QEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGD
                     LFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKD
                     REAGQIRQAAAGVGLNWDENLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHN
                     KGYRWQHEAVIALATPDNVNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPI
                     GLAKRIGSRLKNSYPRELVRDGKLFTGNA"
     gene            complement(3312..5945)
                     /gene="yebT"
                     /locus_tag="JNZ89_003272"
     CDS             complement(3312..5945)
                     /gene="yebT"
                     /locus_tag="JNZ89_003272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding membrane homeostasis protein YebT"
                     /protein_id="HAY8937050.1"
                     /translation="MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQD
                     RSNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDAL
                     REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNNGD
                     LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKG
                     SRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAH
                     SQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTL
                     LRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDV
                     LTLTLTAPESYGIDTGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSK
                     FVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENS
                     LSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNL
                     LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILY
                     ASETAARAVSGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLY
                     PEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPYINVEPGRGNPRRDFELQEATIT
                     DSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
                     QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGK
                     HFLLQESEPKEWREWGTALPK"
     gene            complement(5914..7197)
                     /gene="yebS"
                     /locus_tag="JNZ89_003273"
     CDS             complement(5914..7197)
                     /gene="yebS"
                     /locus_tag="JNZ89_003273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity lipid transport subunit YebS"
                     /protein_id="HAY8937051.1"
                     /translation="MALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEIN
                     SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV
                     MQGIWQMTKQGDTITGAMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLMLERLK
                     EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERYY
                     PQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL
                     LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT
                     LLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA
                     FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD"
     gene            7327..7824
                     /locus_tag="JNZ89_003274"
     CDS             7327..7824
                     /locus_tag="JNZ89_003274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HAY8937052.1"
                     /translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNW
                     AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDA
                     ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF
                     ASVAG"
     gene            7921..8619
                     /gene="proQ"
                     /locus_tag="JNZ89_003275"
     CDS             7921..8619
                     /gene="proQ"
                     /locus_tag="JNZ89_003275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707288.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HAY8937053.1"
                     /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD
                     RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ
                     LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK
                     PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN
                     SGMSLIVRAEHLVF"
     gene            8639..10687
                     /gene="prc"
                     /locus_tag="JNZ89_003276"
     CDS             8639..10687
                     /gene="prc"
                     /locus_tag="JNZ89_003276"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HAY8937054.1"
                     /translation="MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATV
                     SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGD
                     ELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEA
                     ELNALWDSKVKFDELSLKLAGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF
                     AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAI
                     SVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLT
                     RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL
                     RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFS
                     ASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
                     QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTA
                     FGPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL
                     ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK
                     "
     gene            10879..11760
                     /gene="htpX"
                     /locus_tag="JNZ89_003277"
     CDS             10879..11760
                     /gene="htpX"
                     /locus_tag="JNZ89_003277"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HAY8937055.1"
                     /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGF
                     GGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAP
                     DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVVN
                     TFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFS
                     RHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
                     PPLDKRIEALRTGEYLK"
BASE COUNT         3033 a         2906 c         3044 g         2811 t
ORIGIN      
        1 gcaaccccaa atcgtaaagg aaaccgtagc acgtcgtatg caagaacgtg ccacggctgg
       61 ctgatggatg ttcgatagcg cgagtttgaa tgaaaatcag ccggagatga ttttacataa
      121 ttgctacgga attattcaat acaggaattg cttgcgtctg catggattga cctgaaattt
      181 tcccgaaaat ttctctaaaa aactcgaaaa aaatggtaac tggttgaatg tattaatatg
      241 caatggtacg tgtcagggat taaaagatga acgtaaattt attcaacgca ttaattttaa
      301 agggttttat tgtttgttga cgaaaacagg aatcgtgttc ggtctctttt tatctgttaa
      361 aagccagaag catttccttc gctgacttta tagtcaacca taacacacac tctactgtct
      421 gagtccagcg ttttttaaca ttcttgttaa gattatgtga tctttagcac gggaggaaaa
      481 tattgatgaa acagcctgcg cccgtttatc agagaattgc gggtcatcaa tggcgacata
      541 tctggctttc tggcgatata cacggttgtc ttgagcagtt gcgccgcaaa ttatggcatt
      601 gtcgttttga tccgtggcga gatttactta tctcagtggg agacgttatc gatcgtgggc
      661 cgcaaagttt acgttgtctg cagttactgg aacaacattg ggtttgtgcg gtaagaggca
      721 atcatgaaca gatggcgatg gatgcgctgg catcccagca gatgtctttg tggttgatga
      781 atggcggcga ctggtttatt gcgctggcag ataatcaaca gaaacaagcg aaaacggcgc
      841 tggaaaaatg tcagcatttg ccctttattc ttgaagtaca cagtcgcacc ggcaagcatg
      901 ttattgctca tgcggattat ccagatgatg tttatgaatg gcaaaaggac gttgatttgc
      961 atcaggtctt gtggagccgc tcgcgattag gtgaacgcca aaaagggcag ggaattacag
     1021 gtgctgatca tttctggttt ggtcatacac cgttgcgaca tcgcgtggat attggcaacc
     1081 tgcattatat tgataccggt gctgtctttg ggggcgaact gactcttgtg caattgcaat
     1141 gattaaaaat caccgtactc ctgtgcaggt cgccagaaac catctataaa atcctcaatc
     1201 ggaaaacaac cgccctggcg gatccgttga tcgctcatag aataaagaca ctgctgttcc
     1261 gtgttgtaga catccacaac aatatcttca caaccgccat ccaggtagca aacaaaaagt
     1321 accagcgcga acatttcatc cccgaagtgt ggtgccgtac cgttaagttt aggagagatt
     1381 ttacaacggg ggaataacca ggacaaataa cccgccatgc cgacgggttc tttttggatc
     1441 aggcaagacg cataatccag gcatcagatt gttgatcgta acgggtacgg taaaggacag
     1501 agtgttcgcc atttagcagg gcagggatac tggtttcagc atcccaggca tcgagttgca
     1561 tacataaatc ggggtcagat ttacaaggaa tggttaacgt tcgatcaccc ggcgattcac
     1621 cgtgtaattc gccgtcgtcg atttcaaaag cgcctatgcg cacactggtt ttcatcttcg
     1681 tgctctccat ttagctgccg gttgtggtac gaccagtccg atcgcaccat ttttcagcct
     1741 agttgaggca gccgaatgtg ccagtcaaaa agtgcgcttt ttttgtgcgc tgtcaggcgt
     1801 taccggtaaa aagtttccca tcgcgcacca gttcacgcgg atagctgttt ttcaatcgcg
     1861 aaccaatccg tttggctaaa ccaatcggtt gatgctggaa agtaaccaac acgtcatccg
     1921 ccactggcgc ggcttgcggg taaacatcgc gcccgcgata ccactcctcc gcttcctgcg
     1981 gtgtcagttc aaaagcgttc acattgtcgg gggtggcaag ggcaataact gcttcatgct
     2041 gccagcgata acctttgttg tgcgtttcgg caagtttaat ccccaagcga gaaaatcgga
     2101 ctttaccgat cagggcttca atgcccaccg ggaacaacca cagttctttg tcacgctgcc
     2161 agaggcgcag gttttcatcc cagtttaagc caacacctgc agccgcctgg cgaatttgtc
     2221 cagcttcgcg atctttcacc gggctgaacg gaaaattacc gactttgtat ttgggggcgg
     2281 gtaaggcggg aatcgcctga gttttacgca gacgagcaac gaagaagcct tcgcagtcgt
     2341 aaatttgtgg gaaaacatgc aaaaagcctt cttcggtcag cgctttgttt gcaccaggga
     2401 agagatcgcc aagtggtaaa aactctactg cgtcggggta agtctctttc agccacaggc
     2461 aaacggcttc gttttcttcc tggtttaagg tacaggtcga gtaaaccagc gtaccaccag
     2521 gacgtaatgc atgaaaggcg ctgtcgataa gctcccgttg tgtagctgcg atttcctgat
     2581 tgctttctgg tgaccagttt tttagcgcat cgggatcttt acgcaccacg ccttcgccgg
     2641 agcagggagc gtccagcaaa atggcatcaa acatttctgg cactgccgca ccaaacacgc
     2701 ggccatcaaa atgtgtgagc gcaacattac tgatgccaca gcggctgata ttggcatgta
     2761 acacttttac ccgactggcg gaaaactcat tggcaaggat tgccccttcg ttattcatcc
     2821 gcgcggcaat ttgcgtcgtt tttgagcctg gcgcagcagc gacatccatc acccgctgtg
     2881 gtgcattacc gtcagcaaac aaggcggcga cgggcaacat tgaactggct tcctgaatat
     2941 aaaacaggcc acttaaatgc tcggcggtac tacccaatgg caatgcatct tcattgtcgc
     3001 gttcaatcca gaaaccttct tcacaccacg gaattggcgt aagcgtccag ccataaggag
     3061 cggttaattg caggaaatca gcaacggaga ttttcagcgt attaacgcga atgctgcggc
     3121 gcaacgggcg ctgacaggcg gcaagaaaat catcaaatga gagcgtcgaa ggcatagctt
     3181 cgcgcatttg tgtcagaaac gcgtccggga aataaacggt gtgttgggcc acgagcatgt
     3241 accactggca aaaaaacagg cgcgcagttt agcataaacg ctccggcgca ggcacgccgg
     3301 agcagtgggc attatttggg aagcgcagtt ccccattcac gccactcttt cggttcactt
     3361 tcctgcaaca ggaagtgttt gccttcctgg gctttcggtg ccagtggcgt acccggaggc
     3421 gtggcgaagg cgatgccgcc acggataaac tggttaaagg tgccggtttt cactacgccg
     3481 cccgtcagac caaagtccag actgtaaccc gatgccaacc agaagacgga attgttacgc
     3541 accaggtgtt gatagcgttt actgatgcgc atcgcaatca tcacgcgatc tgacaatgtc
     3601 cccagcgtca ttccggtaac cgtacctact tccagaccac ggaacagcac aggcgtacca
     3661 atacctaacg aaccggcttc cggtgcttcg acaataatgc ttaagccatc caggtaacgc
     3721 gaatcagtaa tagtagcttc ttgcaactca aagtcacggc gaggattacc ccgacctggt
     3781 tcgacattga tatacggctg gaggatagta tctagatgct caacgcccgt ggctgaaatt
     3841 tgcggtgtga ccaccgagaa gcgcgtaccg ccgcgggcga aggtctggac atactccgga
     3901 tagagcaccg cctttgcctg tacttcattg cgcgcggtaa tcagatccag cgtctggatt
     3961 tgcccgatat caataccgag atagcgaatt ggcatcccga ccgccagttt tccggcatcg
     4021 aaagcgtgaa gcgtaatctg cccactaacc gcacgggccg ctgtttcgga agcatacaga
     4081 attcgtttgt cgcctttacg ctgactggcg ctggcaccgc tgaggttatc gaagctaatg
     4141 gctcccttta atgctctgga gagcggggat gcctgtacgg tcaggccact accattcagc
     4201 tgaactttcg ccccgccttc tgcccagaac acgctattgc tggtcagaag gttgcgatac
     4261 tccggcttaa tatgcagatc gatatcaaac gcgttagctc gcggacgcac ggtaatcact
     4321 tcaccaactt caaatttacg gtacagcact accgatcctg cctgcacatc cggcagcgtc
     4381 tctgcactca aactcacggt tgtggtgggt aaatcgctaa ggctgttctc cagcgctttt
     4441 tccagattgg catacagtgg atagctggct ttcatctcac ctttatcgcc tggcagaata
     4501 cgtatcccgc cgttaatcca ttctgaggcg ctggcaccaa gaaactcaac gccatccagc
     4561 cccaccttca cgtcgacacg gctgttgacg acaaatttgc tatcgccttt taccagttcg
     4621 cgatgctgag gctcgatggc gacggtaaag gtaacgcctt tgctggtgag tttacgatca
     4681 ataacctggc ctacctgcac gccgtgaaga atgagcggct gacccgtatc aataccgtaa
     4741 ctttccggcg cggtcagggt cagcgtcaga acatcaggtt catgcagcag tgctttttcg
     4801 cctggcacaa caacgaactc tttgcgtggc tcgccatcgc cgggtaccaa ctcgaaggtt
     4861 ttgccagtca gcagggcgct gagattggca tcgctaaggg ataatttcgg attacgtaat
     4921 tcgatgcggg tattttcacg aagcagggta acgacgctgg gatcaactgt catttcccca
     4981 gtgactttac caccaggatt taaatccagt ttagttagct gtccgacttc cagtccctga
     5041 tacattaatg gcgtcgagtc ggcggttaat ccggccccac tcggcagttc cagtttgatt
     5101 attacgccac gctggctatg ggcgaggtct tcatacagac caaaggtatc ttccgcctcg
     5161 gcaggtttcg actcttctgg tgaatcgaag gcaatcgcac cgttaaccag tgccgccagg
     5221 ctttccagtt tcaccttcgc gccactgata ctgacattgg catcaacgcc ggaaacgttc
     5281 cagaaacggc tacctttttt caccagatcg gtaaaacgcc gctcgatcag gacatcaatc
     5341 accacgcctt gtttgttggg attgatggca tagtcgtaga cttttcccac cgggatcttg
     5401 cggaaataga ccaatgaacc gctgttcagc gaaccgagat cgggggcttg caggtggatc
     5461 atcagatcgc cattgttcag ccgatatttc ggttgggtat cgagtgcgac aaagtgatcc
     5521 tgctctttac ctgtacccgg catcatgccg atatagttcc caccgacgag ggcgtccagc
     5581 ccggagacac ctgccaacga tgcttttggc gtcaccagcc agaattgagt ctcttcgcgc
     5641 agcgcatctt tcatatcgga cttgatgctg accttgactt caatcttacg aagatcgtcg
     5701 ctgaggctga tatcctgcac tgttccgact tcaacgccct gataacgaac aggcgtacgg
     5761 cccgggacaa taccatccgc cgacataaag tcgatggtga cggtattact tcggtcctga
     5821 taactgtccc aaatcagcca accggcaatc attagcgcga tgaaaggcag cagccagaaa
     5881 ggtgagatac ggcgtttatt tttaatctgc gcttcagtcg tcgaagcggg cgtttcctga
     5941 ctcatgtgca tcccaaagta agcggctgtc cagccattcc acagcaagaa tagtcaaaat
     6001 tacggctgcg ccaaaataaa acgcagccgg tcccatagta aaagcgagga tctgatcgcg
     6061 attaatcagc gacatggtta aagatatgac aaacaggtcg agcatcgacc agcgtccaat
     6121 ccaggtcacc atccgcagta acagaatgcg tgtgcgtaaa ccttgctggc atttaaaatg
     6181 aatgctcaac agtaaagtga acatgacgat cactttagta aacggtacca gaatactggc
     6241 gataaacacg attccggcga ccgcaatgtt gctacttgcc agcgacataa tcccggaaag
     6301 aatcgtatct tcctgccggc caccattcag ataaatgata gaaataggca ataggttggc
     6361 tggtaacaac aaaacgattg acgctaacag cgccgcccag catttttgca aactatgacg
     6421 acgacgcagg cgtagcggga tatggcaacg cgggcagcga ccacgctgat caggatagcc
     6481 ggtaaaatgg cacccaagac agacacgaag tttctcgtcc ctacgcgtag cggggcgctg
     6541 cggataatat cgctcccaca gctcctcaac attaagatgt gacaacgtca ccgtcgttaa
     6601 aatcaccaac gccacaaaag agaacaagcc gacacccgcc tggatatggg cataatcctg
     6661 tacctttata gaagcaacgc caatgccgac caggtagata tccagcatta cccactcttt
     6721 aagacgctca agcatcagca gtaccggacg taaattcatt cccagtcggt taccaaacca
     6781 taaatatgct atggaggaca ccagaatgag gggggcacca ataacgcaga aaaagaccat
     6841 cgcccccgtt atcgtatcgc cctgtttggt catttgccag atgccttgca tgacgtttgc
     6901 gtcgatacga atacctaaca gccagatatg caacagcggt tcgccccagg caaacggcat
     6961 cagcaacagc atggtgaaag ccattgccgc caggcgcgtt agcgaccagt cgcgcccgtc
     7021 gcgaattttt gcctgacagc gcggacaata ggcactctga tgagaattta tctcgggcag
     7081 gctaaacagc atgtcacatt gcgggcaacg ttggtaatca ccacgcggca gttcctcgcc
     7141 gattgacctc actgttatct tttttgtcgg cgtaatttgt ggtgtgttaa gagccatgac
     7201 gtgccaaatg taataagaat taacattaat cttaacccat gatgggaatg atcttgagca
     7261 ttaacgcatt taatgcttat tttaataggc tggcagttcc aggtaagaca aacaagtgat
     7321 tatataatga acaaaacaga attttacgcg gatttaaatc gcgactttaa cgcgctgatg
     7381 gcgggagaaa ccagttttct ggcaacgctt gcgaacacca gtgcgttgtt atacgagcgt
     7441 ctcactgacg taaactgggc aggtttttat ttgcttgagg acgatacact ggtactcgga
     7501 ccatttcagg gcaaaattgc ctgtgtccgg atacccgtcg ggcgcggggt gtgcggcact
     7561 gcggttgccc gcaatcaagt gcagcgtatc gaggatgttc acgcgtttga cgggcatatt
     7621 gcctgtgatg cggcgagtaa ttctgaaatt gttctgccgc tggtggtgaa aaatcagatt
     7681 attggtgttc ttgacatcga tagtaccgtc ttcggtcgct ttacagacga ggacgagcaa
     7741 ggcttacgtc agcttgtggc acagcttgaa aaagtgcttg caacgacgga ttacaaaaaa
     7801 ttctttgcga gcgtcgcagg ataatcaacg gataacgtag catttactgg tagcgtcatt
     7861 ataatgacgc ctgttcatgc ctgcgcttgt tggctacgtc cgttgtaatc aggaaatttc
     7921 atggaaaatc aacctaagtt gaatagcagt aaagaagtaa tcgcgtttct ggccgaacgt
     7981 tttccccact gtttcagtgc ggaaggtgaa gcgcgtccgc tgaaaatcgg tatttttcag
     8041 gatttggtcg atcgtgttgc cggggaaatg aacctgagca aaacgcaatt acgatccgct
     8101 ttacgtctct acacttcgag ctggcgttat ctttacggtg ttaaacccgg cgcaacgcgt
     8161 gtcgatcttg acggcaaccc atgcggtgag ctggacgagc aacatgtaga gcatgctcgc
     8221 aagcagcttg aagaagcgaa agcgcgtgtt caggcacagc gtgctgaaca gcaagcgaaa
     8281 aaacgcgaag ctgccgcagc tgctggtgag aaagaagacg caccgcgccg cgaacgcaag
     8341 ccacgtccga ccacgccacg ccgcaaagaa ggcgctgaac gtaaacctcg tgcgcaaaag
     8401 ccggtagaga aagcgccaaa aacagtaaaa gcacctcgcg aagaacagca caccccggtt
     8461 tctgacattt cagctctgac tgtcggacaa gctctgaagg tgaaagcggg tcaaaacgcg
     8521 atggatgcca ccgtattaga aatcaccaaa gacggcgtcc gcgtccagct gaattcgggt
     8581 atgtctttga ttgtgcgcgc agaacacctg gtgttctgaa acggaggccg ggccaggcat
     8641 gaacatgttt tttaggctta ccgcgttagc tggcctgctt gcaatagcag gccagacctt
     8701 cgctgtagaa gatatcacgc gtgctgatca aattccggta ttaaaggaag agacgcagca
     8761 tgcgacggta agtgagcgcg taacgtcgcg cttcacccgt tctcattatc gccagttcga
     8821 cctcgatcag gcattttcgg ccaaaatctt tgaccgctac ctgaatctgc tcgattacag
     8881 ccacaacgtg ctgctggcaa gcgatgttga acagttcgcg aaaaagaaaa ccgagttagg
     8941 cgatgaactg cgttcaggca aactcgacgt tttctacgat ctctacaatc tggcgcaaaa
     9001 gcgccgtttt gagcgttacc agtacgcttt gtcggtactg gaaaagccga tggatttcac
     9061 cggcaacgac acttataacc ttgaccgcag caaagcgccc tggccgaaaa acgaggctga
     9121 gttgaacgcg ctgtgggaca gtaaagtcaa attcgacgag ttaagcctga agctggcagg
     9181 aaaaacggat aaagaaattc gtgaaaccct gacacgccgc tacaaatttg ccattcgtcg
     9241 tctggcgcaa accaacagcg aagatgtttt ctcgctggca atgacggcgt ttgcgcgtga
     9301 aatcgacccg cataccaact atctttcccc gcgtaatacc gaacagttca acactgaaat
     9361 gagtttgtcg ctggaaggta ttggcgcagt gctgcaaatg gatgatgact acaccgttat
     9421 caattcgatg gtggcaggtg gtccggcagc gaagagtaaa gctatcagcg ttggtgacaa
     9481 aattgtcggt gttggtcaaa caggcaagcc gatggttgac gtgattggct ggcgtcttga
     9541 tgatgtggtt gccttaatta aagggccgaa gggcagtaaa gttcgtctgg aaattttacc
     9601 tgctggtaaa gggaccaaga cccgcactgt aacattgacc cgtgaacgta ttcgtctcga
     9661 agaccgcgcg gttaaaatgt cggtgaagac cgtcggtaaa gagaaagtcg gcgtgctgga
     9721 tattccgggc ttctatgtgg gtttgacaga cgatgtcaaa gttcaactgc agaaactgga
     9781 aaaacagaat gtcagcagtg tgatcatcga cctgcgtagc aatggcggtg gggcgttgac
     9841 tgaagcggta tcgctctcag gtctgtttat tcctgcgggt cccattgttc aggtccgcga
     9901 taacaacggc aaggttcgtg aagacagcga taccgacggg caggtgttct ataaaggccc
     9961 gctggtggta ctggttgacc gtttcagtgc ttcggcttca gaaatctttg ccgcggcaat
    10021 gcaggattac ggtcgtgcgc tggttgtggg tgaaccgacg tttggtaaag gcaccgttca
    10081 gcaataccgt tcattgaacc gtatttacga tcagatgtta cgtcctgaat ggccagcgct
    10141 gggttctgtg cagtacacga tccagaaatt ctatcgcgtt aacggcggca gtacgcaacg
    10201 taaaggcgta acgccagaca tcatcatgcc gacgggtaat gaagaaacgg aaacgggtga
    10261 gaaattcgaa gataacgcgc tgccgtggga tagcattgat gccgcgactt atgtgaaatc
    10321 aggcgattta acggcctttg ggccggagct gctgaaggaa cataatgcgc gtatcgcgaa
    10381 agatcctgag ttccagaaca tcatgaagga tatcgcgcgc ttcaacgcta tgaaggacaa
    10441 gcgcaatatc gtttctctga actacgctgt gcgtgagaaa gagaataatg aagatgatgc
    10501 gacgcgtctg gcgcgtttga acgaacgctt taaacgcgaa ggtaaaccgg agttgaagaa
    10561 gctggatgat ctaccgaaag attaccaaga gccggatcct tatctggatg agacggtgaa
    10621 tatcgcactc gatctggcga agcttgaaaa agccagaccc gcggaacaac ccgctcccgt
    10681 caagtaatat caatcaggca caagaaattg tgcctgattt tttaacagcg gcaagatgcc
    10741 gtaaatcaga tgctacaaaa tgtaaagttg tgtctttctg gtgacttacg cactatccag
    10801 acttgaaaat agtcgcgtaa cccatacgat gtgggtatcg catattgcgt tttgttaaac
    10861 tgaggtaaaa agaaaattat gatgcgaatc gcgctcttcc tgctaacgaa cctggccgta
    10921 atggtcgttt tcgggctggt actgagcctg acagggatac agtcgagcag cgttcagggg
    10981 ctgatgatca tggccttgct gttcggtttt ggtggttcct tcgtttcgct tctgatgtcc
    11041 aaatggatgg cattacgatc tgttggcggg gaagtgatcg agcaaccgcg taacgaaagg
    11101 gaacgttggc tggtcaatac tgtagcaacc caggctcgtc aggcagggat cgctatgccg
    11161 caagtggcta tctaccatgc gccggacatc aacgcttttg caaccggtgc gcgccgtgat
    11221 gcctctctgg ttgctgtcag caccggtttg ctgcagaaca tgagcccgga tgaagccgag
    11281 gcggtaattg ctcacgaaat cagccacatc gccaatggtg atatggtcac catgacgctg
    11341 attcagggcg tggtgaacac cttcgttatc tttatttccc gtattctggc gcagcttgcc
    11401 gcgggtttta tgggcggaaa tcgtgatgaa ggtgaagaga gcaacggcaa cccgctgatc
    11461 tactttgcgg ttgcaacggt tctggaactg gtgtttggta ttctggcgag cattatcacc
    11521 atgtggttct cgcgtcatcg tgaattccat gctgatgccg gttcggcaaa actggttggt
    11581 cgcgagaaaa tgattgccgc gctgcagcgc ctgaaaacca gctatgaacc gcaagaagca
    11641 accagcatga tggctttctg cattaatggt aagtcgaaat cgctcagtga gttgttcatg
    11701 actcacccgc cgctggataa acgaattgaa gctctgcgta cgggtgaata cctgaagtaa
    11761 tatgaagtaa atactaaaaa gtgcgtcctg atcg
//
LOCUS       DADMIB010000133        11688 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.133, whole genome shotgun sequence.
ACCESSION   DADMIB010000133 DADMIB010000000
VERSION     DADMIB010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11688
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.133"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(67..714)
                     /gene="ychE"
                     /locus_tag="JNZ89_003278"
     CDS             complement(67..714)
                     /gene="ychE"
                     /locus_tag="JNZ89_003278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YchE"
                     /protein_id="HAY8937056.1"
                     /translation="MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN
                     KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
                     KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF
                     ALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
     gene            1192..3867
                     /gene="adhE"
                     /locus_tag="JNZ89_003279"
                     /gene_synonym="adhC"
     CDS             1192..3867
                     /gene="adhE"
                     /locus_tag="JNZ89_003279"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HAY8937057.1"
                     /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
                     ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGILSEDDTFGTITIAE
                     PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA
                     GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
                     VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG
                     KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH
                     EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA
                     RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
                     MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
                     ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
                     EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
                     YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL
                     KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
                     NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
                     LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
                     ILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA"
     gene            3991..4887
                     /locus_tag="JNZ89_003280"
                     /pseudo
     CDS             3991..4887
                     /locus_tag="JNZ89_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904641.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
     gene            complement(5169..5786)
                     /gene="tdk"
                     /locus_tag="JNZ89_003281"
     CDS             complement(5169..5786)
                     /gene="tdk"
                     /locus_tag="JNZ89_003281"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HAY8937058.1"
                     /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
                     GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSE
                     VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA
                     GRPYNEGEQVVIGGNERYVSVCRKHYKEALQVGSLTAIQERHRHD"
     gene            6391..6804
                     /gene="hns"
                     /locus_tag="JNZ89_003282"
     CDS             6391..6804
                     /gene="hns"
                     /locus_tag="JNZ89_003282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator H-NS"
                     /protein_id="HAY8937059.1"
                     /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
                     SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKAKRAQRPAKYSYVDE
                     NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ"
     gene            complement(6948..7856)
                     /gene="galU"
                     /locus_tag="JNZ89_003283"
     CDS             complement(6948..7856)
                     /gene="galU"
                     /locus_tag="JNZ89_003283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HAY8937060.1"
                     /translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
                     VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV
                     TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
                     ETGHSQIMVEQVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
                     VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
                     VEYGIRHNTLGTEFKAWLEEEMGIKK"
     gene            complement(8058..9071)
                     /gene="rssB"
                     /locus_tag="JNZ89_003284"
     CDS             complement(8058..9071)
                     /gene="rssB"
                     /locus_tag="JNZ89_003284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RssB"
                     /protein_id="HAY8937061.1"
                     /translation="MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDAL
                     ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV
                     EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDATVDNPAAAAKLLQEL
                     QPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL
                     LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI
                     LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML
                     SAE"
     gene            complement(9163..10068)
                     /gene="rssA"
                     /locus_tag="JNZ89_003285"
     CDS             complement(9163..10068)
                     /gene="rssA"
                     /locus_tag="JNZ89_003285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase RssA"
                     /protein_id="HAY8937062.1"
                     /translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS
                     LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQCREIMPETEI
                     ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
                     PIPISLTRVLGADIVIAVDLQHDAHLIQQDLLSFNVSEENSENGESLPWHARLKERLG
                     SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH
                     AAIAAGQLAVERKMDELLPLVRTNI"
     gene            10181..10639
                     /locus_tag="JNZ89_003286"
     CDS             10181..10639
                     /locus_tag="JNZ89_003286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HAY8937063.1"
                     /translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ
                     DADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE
                     GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ"
     gene            10689..11531
                     /gene="purU"
                     /locus_tag="JNZ89_003287"
     CDS             10689..11531
                     /gene="purU"
                     /locus_tag="JNZ89_003287"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HAY8937064.1"
                     /translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
                     TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL
                     MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVNHEGLSRNEHDQKMADAIDAYK
                     PDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
                     YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR
                     TIIL"
BASE COUNT         3161 a         2914 c         2648 g         2965 t
ORIGIN      
        1 cgggaacaaa gtaaaaataa tgacgaagta aacggagcat ggcagctccg tttcatttga
       61 aaggaattaa ttaagcaggc cggggaaaat ccccttaata ccagtaacga taaattcaat
      121 ccccaatgcc atcagcaata gccccataat acgcgtaatc acgttgatgc cggtctggcg
      181 taaaacccgt accagccaag gtgccatgcg gaacaatccc cagcaacata aagcgaacaa
      241 tgcaatagcc acaaagaaac caaacagata gctaatgctg tgataacgcg taccccagac
      301 gatggtagaa ctgatcgccc ctggccccgc catcaacggc aacgccaatg gcaccacacc
      361 aatgctttca cgtaccgcgg tttctgattt ttcttgcttg ttctgtttat cctcgccaag
      421 cttgccgctg atcatcgaca tcgctatcgt caccaccagg atgcccccgg cgatacggaa
      481 cgaatcaatt gatataccaa aaagttgcag aatcgtgtcg ccgagaaaaa gcgagatcca
      541 caagataatg gccacagaca ggttggctgt aaggttagtt ttgtttcgcg ctgccgctgt
      601 ctgataactg gtcatgctga taaagacggg aataatccct accgggttga ccagcgcaaa
      661 taacccgatg aaaaatttga agtaaacggg aaaatcaaaa aaggtctgaa tcacggttag
      721 ctccgaagca aaagccggat aatgttagcc ataaataagg ttgaaaagac gcgctgacaa
      781 tacgcctttt gacagcattt ttcacctcct aactacttaa aattgctatc attcgttatt
      841 gttatctagt tgtgcaaaac atgctaatgt agccaccaaa tcatactaca atttattaac
      901 tgttagctat aatggcgaaa agcgatgctg aaaggtgtca gctttgcaaa aaatttgatt
      961 tggatcacgt aatcagtacc cagaagtgag taatcttgct tacgccacct ggaagtgacg
     1021 cattagagat aataactcta atgtttaaac tcttttagta aatcacagtg agtgtgagcg
     1081 cgagtaagct tttgattttc ataggttaag caaatcatca ccgcactgac tatactctcg
     1141 tattcgagca gatgatttac taaaaaagtt taacattatc aggagagcat tatggctgtt
     1201 actaatgtcg ctgaacttaa cgcactcgta gagcgtgtaa agaaagccca gcgtgaatat
     1261 gccagtttca ctcaagagca agtagacaaa atcttccgcg ccgccgctct ggctgctgca
     1321 gatgctcgaa tcccactcgc gaaaatggcc gttgccgaat ccggcatggg tatcgtcgaa
     1381 gataaagtga tcaaaaacca ctttgcttct gaatatatct acaacgccta taaagatgaa
     1441 aaaacctgtg gtattctgtc tgaagacgac acttttggta ccatcactat cgctgaacca
     1501 atcggtatta tttgcggtat cgttccgacc actaacccga cttcaactgc tatcttcaaa
     1561 tcgctgatca gtctgaagac ccgtaacgcc attatcttct ccccgcaccc gcgtgcaaaa
     1621 gatgccacca acaaagcggc tgatatcgtt ctgcaggctg ctatcgctgc cggtgctccg
     1681 aaagatctga tcggctggat cgatcaacct tctgttgaac tgtctaacgc actgatgcac
     1741 cacccagaca tcaacctgat cctcgcgact ggtggtccgg gcatggttaa agccgcatac
     1801 agctccggta aaccagctat cggtgtaggc gcgggcaaca ctccagttgt tatcgatgaa
     1861 actgctgata tcaaacgtgc agttgcatct gtactgatgt ccaaaacctt cgacaacggc
     1921 gtaatctgtg cttctgaaca gtctgttgtt gttgttgact ctgtttatga cgctgtacgt
     1981 gaacgttttg caacccacgg cggctatctg ttgcagggta aagagctgaa agctgttcag
     2041 gatgttatcc tgaaaaacgg tgcgctgaac gcggctatcg ttggtcagcc agcctataaa
     2101 attgctgaac tggcaggctt ctctgtacca gaaaacacca agattctgat cggtgaagtg
     2161 accgttgttg atgaaagcga accgttcgca catgaaaaac tgtccccgac tctggcaatg
     2221 taccgcgcta aagatttcga agacgcggta gaaaaagcag agaaactggt tgctatgggc
     2281 ggtatcggtc atacctcttg cctgtacact gaccaggata accaaccggc tcgcgtttct
     2341 tacttcggtc agaaaatgaa aacggctcgt atcctgatta acaccccagc gtctcagggt
     2401 ggtatcggtg acctgtataa cttcaaactc gcaccttccc tgactctggg ttgtggttct
     2461 tggggtggta actccatctc tgaaaacgtt ggtccgaaac acctgatcaa caagaaaacc
     2521 gttgctaagc gagctgaaaa catgttgtgg cacaaacttc cgaaatctat ctacttccgc
     2581 cgtggctccc tgccaatcgc gctggatgaa gtgattactg atggccacaa acgtgcgctc
     2641 atcgtgactg accgcttcct gttcaacaat ggttatgctg atcagatcac ttccgtactg
     2701 aaagcagcag gcgttgaaac tgaagtcttc ttcgaagtag aagcggaccc gaccctgagc
     2761 atcgttcgta aaggtgcaga actggcaaac tccttcaaac cagacgtgat tatcgcgctg
     2821 ggtggtggtt ccccgatgga cgccgcgaag atcatgtggg ttatgtacga acatccggaa
     2881 actcacttcg aagagctggc gctgcgcttt atggatatcc gtaaacgtat ctacaagttc
     2941 ccgaaaatgg gcgtgaaagc gaaaatgatc gctgtcacca ccacttctgg tacaggttct
     3001 gaagtcactc cgtttgcggt tgtaactgac gacgctactg gtcagaaata tccgctggca
     3061 gactatgcgc tgactccgga tatggcgatt gtcgacgcca acctggttat ggacatgccg
     3121 aagtccctgt gtgctttcgg tggtctggac gcagtaactc acgccatgga agcttatgtt
     3181 tctgtactgg catctgagtt ctctgatggt caggctctgc aggcactgaa actgctgaaa
     3241 gaatatctgc cagcgtccta ccacgaaggg tctaaaaatc cggtagcgcg tgaacgtgtt
     3301 cacagtgcag cgactatcgc gggtatcgcg tttgcgaacg ccttcctggg tgtatgtcac
     3361 tcaatggcgc acaaactggg ttcccagttc catattccgc acggtctggc aaacgccctg
     3421 ctgatttgta acgttattcg ctacaacgcg aacgacaacc cgaccaagca gactgcattc
     3481 agccagtatg accgtccgca ggctcgccgt cgttatgctg aaattgctga ccacctgggt
     3541 ctgagcgcac cgggcgaccg tactgctgct aagatcgaga aactgctggc atggctggaa
     3601 acgctgaaag ctgaactggg tattccgaaa tctatccgtg aagctggcgt tcaggaagca
     3661 gacttcctgg cgaacgtgga taaactgtct gaagatgcat tcgatgacca gtgcaccggc
     3721 gctaacccgc gttacccgct gatctccgag ctgaaacaga ttctgctgga tacctactac
     3781 ggtcgtgatt atgtagaagg tgaaactgca gcgaagaaag aagctgctcc ggctaaagct
     3841 gagaaaaaag cgaaaaaatc cgcttaatca gtagcgctgt ctggcaacat aaacggcccc
     3901 ttctgggcaa tgccgatcag ttaaggatta gttgaccgat ccttaaactg aggcactata
     3961 acggcttcca caatagggag ccgttttctt atgccacttc tcaatgatct gctcgatttc
     4021 agtgaccatc cgcttatgcc tccgccctct gcacaactat ttgcagaaca ccttcccacc
     4081 gagtggatac aacactgcct gacgctttct gctcatgcga ccgttcgccg ccgtcgttta
     4141 ccgggggaca tggttatctg gatggtggtg caatgagcca attaccgatg ttgttcgccg
     4201 tctgaacctg agcgcggatg gcgaagcggg gatgaacctg ctggcccgca gcgctgtcac
     4261 ccaagcgcgt cagcgcgtgg gggccgcccc agtggaatgg ctcttccgcc agaccgcaca
     4321 gacaggggcg cggaacgtta cctgaaggat gactggcacg gcctgcaact ttttgccatt
     4381 gatggcgcac agttcaggac acctgataaa cccgagctgc gtgaatatta tgggtctgcc
     4441 aacacatcca ctaagcggca gaacgcctac ccggttatgc gtctggtggc cttaatgaac
     4501 ctgggaagtc acattctgct gaatgccgtg accgcacctt accggcagag cgaaactgtg
     4561 ctggcccact ccatgctcgc caccatcccg gataactcta ttacgttgtt tgataagctt
     4621 ttttacagcg aagacctgct gctaacgctg aaccagaagg gttgtaaccg ccactggcta
     4681 ctgcctgcgt ggaagaatat cgcatcagaa atgatagagc tgggaaacac ggcgtcacca
     4741 gggaccatcc cgaaacgact ggagcatctt cggggtgctc tggaagtggt gttcataaca
     4801 aaacgccccc gaccatcaag gccgaggtcg gttaagatat caaaaacccg ttatcctgtg
     4861 aaacatagtg ccgctcctct taagtgaacg gcattgccct tctggggccg tattttttgt
     4921 ttacccaaag caacttttcc ataaaccgac agcattagcc ttcatcatat ttgcgacgat
     4981 gtataacgcc taaacacagg gatattgtac tttacaggtc acaagtcaac gtcggtgctt
     5041 aagagccctg tgaggcgtat agcggcgtta aaaaactgcc gagaagggta tatagcccgg
     5101 aagaagtgcg taaaacgaac tgacaggata aaagtgccct gctcaccctg tcagtaaaga
     5161 aattcttatt aatcgtggcg atgcctttcc tgaatagccg ttaatgagcc gacttgtaac
     5221 gcctctttat agtgtttacg gcatacagaa acgtatcgtt cattaccacc aattaccacc
     5281 tgctcacctt cgttataagg tctgcctgct tgatcaagac gcagcaccat gcttgcttta
     5341 cggccacaaa aacagatggt ttttaattca accagtttgt cggaccatgc cagtaagtat
     5401 tggctgccaa taaataattc acctcgaaaa tcggtacgta aaccataaca aagtacgggt
     5461 atatcgagtt gatcgacaac ctccgataat tcatatactt gttgtctggt taaaaactgg
     5521 cattcatcaa ccagtacgca atgaattgcc tgctgttcat gttccgcacg aatctcatca
     5581 aataatgatg aattttggtt aaataatttt gcaggcgatg acaaacctat acgcgaactg
     5641 actttcccgg caccaaagcg atcatcaatt tctgccgtat atacgacagt gcgcatgccg
     5701 cgttcttggt aattgtatga agattgcaac aatgctgtag acttacccgc attcattgcg
     5761 gaatagtaga aatatagctg tgccatcagc cacaggccct caatgatatg aaataaagtt
     5821 ggctggagtt tatcataatt cgtcagtttt tcagctcaac agtatgcaca gaagtgggta
     5881 tatgcgttct cccttacgaa gccttgcata atccttctga gctatcatta caactgcctc
     5941 gcttgttata agcgggtaaa tgactgctgg taactattca caatctttaa cctgttgcgc
     6001 aagtaatagc cctctgttga cctccaggag atagtgcaat actaagtcca tgctcttatt
     6061 gcgactgttc tacttttcat cattcgctta atagggaatt ctcgtaaaca caactaatac
     6121 agaagactga aaggccgtca gcctacgata atctccccat aaaatgtgac atgaatcagg
     6181 aagttttaac ctcacgtgct gcgaaatcat cggtgtaaat agggctatat gccgcgtctt
     6241 ttctggctaa ttttatgaaa agatatttat tggcggcaca aaataaagaa caattttgaa
     6301 ttccttacat tcctggctat tgcacaactg aatttaaggc tctattatta cctcaacaaa
     6361 ccaccccaat ataagtttga gattactaca atgagcgaag cacttaaaat tctgaacaac
     6421 atccgtactc ttcgtgcgca ggcaagagaa tgtacacttg aaacgctgga agaaatgctg
     6481 gaaaaattag aagttgttgt taacgaacgt cgcgaagaag aaagcgcggc tgctgctgaa
     6541 gttgaagagc gcactcgtaa actgcagcaa tatcgcgaaa tgctgatcgc tgacggtatt
     6601 gacccgaacg aactgctgaa tagccttgct gccgttaaat ccggcaccaa agctaaacgt
     6661 gctcagcgtc cggcaaaata tagctatgtt gacgaaaacg gcgaaactaa aacctggact
     6721 ggccagggcc gtactccagc tgtaatcaaa aaagcaatgg atgagcaagg taaatccctc
     6781 gacgatttcc tgatcaagca ataatctttt gtagattgca attgctaaaa atcccgccat
     6841 cggcgggatt ttttattgtc cggtttaaga caatttaata agaataagct ataaaaaaac
     6901 ggcgtcgatt gttcaacgcc gtttcgtgga taacaccgat atggatgtta cttcttaatg
     6961 cccatctctt cttcaagcca ggctttaaat tccgtgccaa gggtgttatg acgaataccg
     7021 tattcaacga aggcctgcat gtaacctaat ttattaccgc agtcatggct cttccctttc
     7081 atatgatagg cttccaccgt ttctttttcg atcagcatat caattgcgtc ggtgagctga
     7141 atttcatcac cagctcccgg aggggttttt gccagcaacg gccaaatatc cgcgctaagt
     7201 acgtaacgac ccacaatagc gagattagac ggcgcaacat ccgctttcgg tttttctacc
     7261 acaccaacca tcggtacact ttcacccggc gctaattcaa cgcctttgca atccacaacg
     7321 ccatatgcgg tcacatcagc aacctgttca accatgatct ggctatgacc cgtttcatca
     7381 aagcggcgga tcatctctgc caggttatcc tgtgacaaat cggattcata ttcatccaga
     7441 ataacatcag gcaaaataac agctaccggt tcatcaccca ctaccgggtg agcacacaat
     7501 accgcgtgtc ccaggccttt cgccagcccc tgacgaactt gcataatagt cacgtgcggc
     7561 ggacaaatag actgcacttc atcaagcagt tgacgtttta cacgtttttc cagcattgct
     7621 tccagttcaa aactggtatc aaagtggttt tcaatcgagt ttttagatga gtgcgtaacc
     7681 agcacaattt cagtaatgcc agccgcaata cattcattca cgacgtattg aattaatggc
     7741 ttatcgacaa gtggcagcat ctctttcggg atggctttcg tcgccggcaa catcctggtt
     7801 cctaatcccg caacggggat aacggctttt ttgactttcg tattaatggc agccatttaa
     7861 attctcctgg actgttcgtg ttttgaacgt gttcatattt ctgtatcgca tcccagtata
     7921 tcagcacccc gaaggggcta agttctgaaa aggaggcgag ttagcataat taagacaatt
     7981 acttatacga atggcgacga tagtaccacc agccgacatt agcaggtaat gcaaatttag
     8041 tccgcgttat cgtttgctca ttctgcagac aacatcaagc gcagtcgacc accggttccc
     8101 catatttggc attgccaggc atcgcatcgc tggctcaatt gattcaaata agcgttacct
     8161 aaagtgccta acggaacacc attactgatt tgcacctggt gttcgccggt atttaacgtc
     8221 gcattcagac ccgcagaaac cagaatgaga tttttcagtt cgcgatgata atagccaact
     8281 aatagcggaa actgccccgg cagattggcc tgacggagta aatggtttac ctgcttcaat
     8341 aacgcgccca gctctggcaa ccgttgattt tggtgtgcaa gctgttcctg taataatccg
     8401 ttaaacaatg cgcgtaataa caaggcagca agtacgccat tatgtccagc tcgggtgaca
     8461 tcaaggcaat aaaatgccag atcgttttcc gaaagtgcgg caatatcaag caccaggccg
     8521 ggtttgtccg cggcaaccaa ttgacgataa ttaacccggc aatgggaaat cacctgctga
     8581 accggcggtt gtagttcctg taataatttc gccgctgcgg cagggttatc aaccgttgca
     8641 tcccaatcgc gaaaaagcct ttcctcttcc tcaacgcgcg aattaaacat gctgggatag
     8701 agacaggcaa aaaccatctc gcgcaagcga ttcagatctt taactggttt cagcaaaaca
     8761 tcttcaacgc ccagacgtaa cgctttggca atatctgcca tattttcagt ggcagatatc
     8821 accagaactg gggtctggtc gcctctgtta cgtatatgct ccagcagttt aagcccgttc
     8881 attcgtggca tcgcgatatc acatatcatc aggtctggag tgaaacctcc cagcaactca
     8941 agggcatcca ccccatcagc cgccagtacc gttgtcgctc ccaatgagga aaaccatgaa
     9001 tccagaagcg agcgaaatac ctgctcatct tcaacaatga gaatctgttt tccgaccaat
     9061 ggctgcgtca tgttctctcc cctgactggc tttactcaat agtggcatgc tattgccacc
     9121 tgcgcctgtc agaattaact taagtgtaga taaaaattct ggtcaaatgt tggtgcgtac
     9181 caacggcaaa agttcgtcca ttttcctttc cactgccagc tgtccggccg caatggcagc
     9241 gtgcgcgcga tggaaatcaa gcgtagatat ttgcgggcaa acaggttgaa tcagaatatc
     9301 gggcggatca cctgccatgc ggttcctttt aaggcggttc tccagcacct ggatagaagt
     9361 ggtcataatc tctgttgccg ttggcgctgt caccgcccga cgtgttgtta tactgcctaa
     9421 cctttctttc agacgcgcat gccacggcaa agattcacca ttctcgctat tttcttcact
     9481 gacattaaag gagagcaaat cttgttgtat caaatgagca tcgtgctgca ggtcgaccgc
     9541 tatcacaata tcagccccca atacacgcgt gagggaaata ggaattgggt taactactgc
     9601 tccatcaacc agccagtagc cgttatgtgc aacaggtgcc atgagtcctg gaatactgca
     9661 tgatgcgcga atagcaagat ggagatcgcc ttcagtaaac cataattcac gtcccgtact
     9721 taaattggtg gcaacagccg caaagcgacg ggaacaattt tcgatctctg tttccggcat
     9781 tatttcgcgg cattgattga agacacgctc gccgcgcagt aacccaccgc gctgccagga
     9841 gagatccatc aggcgtaaaa catcccaata actgaaagag gtcacccaat cttccagcgc
     9901 agataatcga tcgcatgcat aggcagcgcc caccagcgaa ccaattgaac atcctgcaac
     9961 gatatcaatt tcaataccca ctttttttag cgcattaata acgccaatat gcgaccaacc
    10021 tctcgccgcg ccagatccca gcgccagccc tatttttatc tttctcatta ttcccgcaag
    10081 attcccctgg aatgcaatcg tagccacatc gctactgctc ggttaacata gtgctactca
    10141 ggcggttaat acgccgttat tgtttccagg gagattattt gtgtctcagc tttgtccctg
    10201 tggtagtgct gtcgagtata gcctatgttg ccacccttat gtgtctggtg aaaaggttgc
    10261 acctgatcca gaacatctca tgcgttcgcg ttactgcgct tttgtgatgc aagacgcaga
    10321 ttatttaata aagacctggc atccctcttg tggagcagcg gcgttacgtg ccgaattgat
    10381 ggccggattt gcgcatactg aatggttggg attgaccgta tttgaacatt gttggcagga
    10441 cgccgacaat atcggatttg tcagttttgt tgctcgattt accgaaggtg gcaaaacagg
    10501 tgcaataatt gaacgttcgc gatttttgaa agaaaacggt caatggtact atattgacgg
    10561 tacacgtccg cagtttggtc gcaacgatcc ctgcccttgt ggttcaggta aaaaatttaa
    10621 aaagtgctgc ggccaataat ggttgacggt acggtttagc aaacactctc aacaaggttt
    10681 ttccagcaat gcattcactc caacgtaaag ttctgcgtac tatttgtccg gaccaaaaag
    10741 gtctgatcgc acgtattacc aatatttgct acaagcacga gttaaatatc gtacagaaca
    10801 atgaatttgt tgatcaccgt accgggcgct tttttatgcg cacggaactg gaagggattt
    10861 ttaatgattc caccctgctg gcggatctcg atagcgcatt gccagaaggc tccgtgcgtg
    10921 agctgaatcc tgccggtcgt cgccggatag tgattctggt cactaaagaa gcgcattgcc
    10981 ttggcgattt gttgatgaaa gccaattacg gcggcctgga tgtcgaaatc gcggcagtta
    11041 ttggtaacca cgatacttta cgttctctgg ttgagcgttt tgatattccg tttgagctgg
    11101 taaaccatga agggttaagc cgcaacgagc acgatcaaaa gatggcagac gccattgatg
    11161 cttataaacc tgactatgtg gtgctggcga agtatatgcg ggtattaacg ccggaatttg
    11221 tggcacgctt cccgaataaa atcatcaata ttcaccattc attcctgcct gcgtttatcg
    11281 gcgcacgtcc ttatcaccag gcctatgaac gtggtgtgaa gattattggc gcaaccgctc
    11341 actatgtgaa tgacaatctg gacgaaggcc caatcatcat gcaggacgtt attcatgtcg
    11401 atcataccta cacagctgaa gatatgatgc gcgcaggtcg tgacgtcgag aaaaacgtct
    11461 taagtcgtgc gctatacaaa gtactggcac agcgcgtctt tgtttacggt aatcggacga
    11521 ttattcttta atcgccagca aaaataactg gttaccttta atccgttacg gatgaaaatt
    11581 acgcaaccag ttcatttttc tcaacgtaac actttacagc ggcgcgtcat ttgatatgat
    11641 gcgccccgct tcccgataag ggagcaggcc agtaaaaagc attacccc
//
LOCUS       DADMIB010000134        11575 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.134, whole genome shotgun sequence.
ACCESSION   DADMIB010000134 DADMIB010000000
VERSION     DADMIB010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11575
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.134"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..985)
                     /locus_tag="JNZ89_003288"
     CDS             complement(<1..985)
                     /locus_tag="JNZ89_003288"
                     /EC_number="3.4.21.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310582.1"
                     /note="PtrB; oligopeptidase that cleaves peptide bonds
                     following arginine and lysine residues; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
                     /protein_id="HAY8937065.1"
                     /translation="MLPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLQQEN
                     SYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQS
                     AFSEEWDEWETLLDANKRAAHSEFYSMGGMAITPDNTIMALAEDFLSRRQYGIRFRNL
                     ETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHAIGTPASQDKLIYE
                     EKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLLDAEMADAEPFVFLPRRKDHEYSLD
                     HYQHRFYLRSNRHGKNFGLYRTRLRDEQQWEELIPPRENIMLEGFTLFTDWL"
     gene            complement(1194..1853)
                     /locus_tag="JNZ89_003289"
     CDS             complement(1194..1853)
                     /locus_tag="JNZ89_003289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HAY8937066.1"
                     /translation="MANWLNQLQSLLGQSSSSISSSADQGLGKLLVPGALGGLAGLLV
                     ANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERT
                     ERLILALVFAAKSDGHIDAKERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATG
                     VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLA
                     E"
     gene            complement(2180..2536)
                     /gene="yebF"
                     /locus_tag="JNZ89_003290"
     CDS             complement(2180..2536)
                     /gene="yebF"
                     /locus_tag="JNZ89_003290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310584.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YebF"
                     /protein_id="HAY8937067.1"
                     /translation="MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIA
                     ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY
                     QVSVDCKAGMAEYQRR"
     gene            complement(2603..2897)
                     /gene="yebG"
                     /locus_tag="JNZ89_003291"
                     /pseudo
     CDS             complement(2603..2897)
                     /gene="yebG"
                     /locus_tag="JNZ89_003291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310585.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein YebG"
     gene            3031..4209
                     /gene="purT"
                     /locus_tag="JNZ89_003292"
     CDS             3031..4209
                     /gene="purT"
                     /locus_tag="JNZ89_003292"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HAY8937068.1"
                     /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY
                     ADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEEGLNVV
                     PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSS
                     SGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
                     APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCSDEVI
                     FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQN
                     VTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG
                     "
     gene            complement(4265..4906)
                     /locus_tag="JNZ89_003293"
     CDS             complement(4265..4906)
                     /locus_tag="JNZ89_003293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HAY8937069.1"
                     /translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL
                     EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
                     AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP
                     TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL"
     gene            complement(4943..6754)
                     /gene="edd"
                     /locus_tag="JNZ89_003294"
     CDS             complement(4943..6754)
                     /gene="edd"
                     /locus_tag="JNZ89_003294"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020244583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HAY8937070.1"
                     /translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN
                     LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG
                     QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
                     LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
                     GTCTFYGTANTNQMVVEFMGMQSPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM
                     PIGKMIDEKVVVNGIVALLATSGSTNHTMHLVAMAREAGIQINWDDFSDLSDVVPLMA
                     RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGEL
                     DWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV
                     FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRRFKIALVT
                     DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE
                     PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF"
     gene            complement(6989..8464)
                     /gene="zwf"
                     /locus_tag="JNZ89_003295"
     CDS             complement(6989..8464)
                     /gene="zwf"
                     /locus_tag="JNZ89_003295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HAY8937071.1"
                     /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTR
                     IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFNRL
                     GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN
                     DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
                     IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
                     SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
                     LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
                     LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
                     SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
     gene            8801..9670
                     /locus_tag="JNZ89_003296"
     CDS             8801..9670
                     /locus_tag="JNZ89_003296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HAY8937072.1"
                     /translation="MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEA
                     NVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESA
                     MATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS
                     DDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLARE
                     ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES
                     RFDKQLLNLSDDR"
     gene            9798..11240
                     /locus_tag="JNZ89_003297"
     CDS             9798..11240
                     /locus_tag="JNZ89_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase II"
                     /protein_id="HAY8937073.1"
                     /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
                     EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
                     GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
                     GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
                     KIVAKVERAEAVCSQDAMDDIILASDVVMVARGDLGVEIGDPELVGIQKALIRRARQL
                     NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
                     ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
                     LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGY
                     LMSGDLVIVTQGDVMSTVGSTNTTRILTVE"
     gene            complement(11300..11518)
                     /locus_tag="JNZ89_003298"
     CDS             complement(11300..11518)
                     /locus_tag="JNZ89_003298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001499009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937074.1"
                     /translation="MEYQADYYITINDSIKTWVQTQYSKDSGLPMAVIGHSVAEEAGM
                     RRLASYLDLHSGYPCIHFTGGCDYDWIE"
BASE COUNT         2800 a         2980 c         2894 g         2901 t
ORIGIN      
        1 ccagccagtc ggtaaacagc gtaaaccctt ccagcatgat gttttcgcgt ggcggaatta
       61 actcttccca ctgttgctca tcacgcaggc gggtacggta taagccaaag tttttgccgt
      121 ggcggttgga acgcagataa aaccgatgct ggtagtgatc aaggctgtat tcgtgatctt
      181 tgcggcgcgg cagaaaaaca aacggctcgg catcggccat ttccgcgtcc agcaggcgaa
      241 cttcactggt ggtggcgctg gccaaatgaa tgactacata gtgcttcgag gtcgttttat
      301 gcaggctgac gtaataggta tcgtcttttt cttcgtagat cagtttatct tgcgatgctg
      361 gcgtaccgat ggcgtgacgc cagacctgat aaggcagcag cgtcaccgga tgcttgcgaa
      421 catagtagaa agtccaggag tcatttgccc agacaaagct gggttcaacg ttatccagca
      481 gttccgggta ccagttacca gtttccagat tacgaaaacg aatgccgtac tggcgtcggg
      541 aaagaaaatc ttctgccagc gccataatgg tgttatcggg cgtaatcgcc attccgccca
      601 tcgaataaaa ctcactatga gctgcgcgct tattggcatc gagcaatgtt tcccactcat
      661 cccactcttc actgaatgcc gattgacgct ggtagatagc atattcacag cctggttcat
      721 aaatatgccg atagcggtag ccatttttga tgtagggcgc agaaacttct cgttgcggaa
      781 tgcggtcgat gatttccttt aagatgcgat cctgcaaggc ttgttgtgag gccatcaccc
      841 gatgaccgta actattttct tgttgcaggt agtccaggac ttctggctga gaacgcgtat
      901 cgtcccgcag ccagtagtaa ttatcgatgc gcgtatcgcc atgaagcgtc atggcgtggg
      961 gaatgcgggc ggcttttggt agcatgttat tgttctttct ggttgaaaca tcttataagg
     1021 gtggcaaaac tcaccgggga tgcaagcgaa acaggggagt cattgcttag atgatgacag
     1081 gtaatggcgc ggatatcgaa tgttatgcag acagagaaaa tcagcctgtt caaatggctg
     1141 tgcgattctg gatagcccga aatagtcaac ttcaggctat ccagagagcg gaattattcc
     1201 gccaaagtgc gtttttgctg ttcgagatcg cgttcaatgc cgtcacgaac atcctggggg
     1261 attttcagcg cgtcacccag tgcattcagg taactgcgtt ccataaaatg gtcaatatca
     1321 atagccgcgc aactcaggaa atagatttcc agcgcctctt cttcattgcg gaccccggta
     1381 gccaagcgtt gtggatccag cggttgttcg attgcctgct caatgagtac acgcccctgc
     1441 tcttccacgc cggcttcacg caattgctgg tcgattgccg cacgttcttt ggcatcaata
     1501 tgaccatcac ttttagcggc aaagaccagc gcaaggatca aacgttctgt acgctcatcc
     1561 agcggcgtac tttgcgcgcc aaactgcggt tcgtcctgat gcgccgcgcg aattttatct
     1621 ttgtatttat tccacagcac cgtacccgct accgctccgc cgccaaccag taacgcgttg
     1681 gtgccatatt tcgtaagaag tttacgtgct gatttatttg cgaccagcag cccagccagt
     1741 ccgcctaatg cgcctggcac taacagtttg cccaatccct gatccgcaga cgaggagata
     1801 gaagaactgc tttgcccaag cagggattgc agttgattta accagttagc catatttgct
     1861 cctcaataac catttttagt gcctgtagca tagcggatga ggatgtcaga aaatgtatat
     1921 cgagacaaaa gatgcgcaaa taagcggggc ggtaggccgt tattcaaaga aattcgcgcc
     1981 aggtaaggta tttactgtat atcaggtgat aagggtattt taggtgaaag tagtttgtcg
     2041 ttttgagtgg cattgtttga tgctgattgc ccgatgcgac gctgttgcgt cttctcaggc
     2101 ctacgattgt ggtgcgttct ggggcggaca aggcactcgc gccgcatccg ccaacggtca
     2161 atcgaattat cagaagccat taacgccgct gatattccgc cattcccgct ttgcagtcca
     2221 cgctgacctg gtaatgaata tcggcacttt taccacgcac ggttagcggt actgaccatt
     2281 tatcatcttt accctgaatg tcctgcaaac tgacccaagc cacgggatcg gcctgaccga
     2341 caattttttg atcatctgcc caacgcgcca cgcgattttg ttgataatca cgttttacgc
     2401 tcgcggcaat tccggcagca tccagacctt cacactttgg gaaagtgacc gacttgctgg
     2461 tttcattatt ggcagcgaaa actgatgcgc aggcagaaac caacaacagc cctaaaaacg
     2521 cccctctttt tttcatgttt ttctccatag cacaatgatt caggagaaag catggtacaa
     2581 attgtcagga gcgcaagttg cttcaggccg cgtgtgaggc atcttcctct tcggattcag
     2641 caccgacgac ctgtgggtgg ggacggtaat ttgccggttt tcagaatggt gctcagcaca
     2701 tctttttgtt ctgccagcca tagcgaaagg gcttcacgtt gctcgtcttc catttgcact
     2761 ggagaattag tcagccaggt gtcaagcaga tccgccgtat caagcatttt gtcataagca
     2821 tcggcttcct ttttgctggt aaacgacatt ttctcttcgc cctcacgaat gactacgtat
     2881 ttaacttcaa ccgccatttg cagcctctca taataactgt gattttatac agtgtatttc
     2941 ttttcggttg agaaatcaaa atcaacaata aagacacacg caaacgtttt cgtttatact
     3001 gcgcgcggaa ttaatcaggg gatattcgtt atgacgttat taggcactgc gctgcgtccg
     3061 gcagcaactc gcgtgatgtt attaggctcc ggtgaactgg gtaaagaagt ggcaatcgag
     3121 tgtcagcgtc tcggcgtaga ggtgattgcc gtcgatcgct atgccgacgc accagccatg
     3181 catgtcgcgc atcgctccca tgtcattaat atgcttgatg gtgatgcatt acgccgtgtg
     3241 gttgaactgg aaaaaccaca ttatatcgtg ccggagatcg aagctattgc caccgatatg
     3301 ctgatccaac ttgaagagga aggactgaat gttgtcccct gcgctcgcgc aacgaaatta
     3361 acgatgaatc gcgagggtat ccgtcgcctg gcggcagaag agctgcagct gcccacttcc
     3421 acttatcgtt ttgccgatag cgaaagcctt ttccgcgagg cggttgctga cattggctat
     3481 ccctgcattg taaaaccggt gatgagctct tccggcaagg ggcagacgtt tattcgttct
     3541 gcagagcaac ttgctcaggc atggaagtac gctcagcaag gcggtcgcgc cggagcgggc
     3601 cgcgtaattg ttgaaggcgt cgttaagttt gacttcgaaa ttaccttgct aaccgtcagc
     3661 gcggtggatg gcgtccattt ctgtgcaccg gtaggtcatc gccaggaaga tggcgactac
     3721 cgtgaatcct ggcaaccaca gcaaatgagc ccgcttgccc ttgaacgtgc gcaggagatt
     3781 gcccgtaaag tggtgctggc actgggcggt tatggtctgt ttggtgtcga gctgtttgtc
     3841 tgtagtgatg aggtgatttt cagtgaggtc tcccctcgtc cacatgatac cgggatggtg
     3901 acgttaattt ctcaagatct ttcagagttt gccctgcatg tacgtgcctt cctcggactt
     3961 ccggttggcg ggatccgtca gtatggtcct gcagcttctg ccgttattct gccacaactg
     4021 accagtcaga atgtcacgtt tgataatgtg cagaatgccg taggcgcaga tttgcagatt
     4081 cgtttatttg gtaagccgga aattgatggc agccgtcgtc tgggtgttgc gctggcgacc
     4141 gctgagagtg ttgttgacgc cattgaacgc gcgaagcacg ccgccggaca ggtaaaagta
     4201 cagggttaaa cccggcaaaa aaacgctaca aaaatgcccg atcgtagatc gggcgttttg
     4261 acttttacag cttagcgcct tctacagctt cacgcgccag cttagtaatg cggtcgtaat
     4321 cgcccgcttc cagcgcatct gccggaacca gccaggaacc accgatgcac agcacgcttt
     4381 tcagcgccag gtagtcacgg tagttagccg gagaaatacc acccgtcggg cagaaacgga
     4441 cctgggagaa cggacccgcg atcgcctgca gggctttcac gccgccgtta gcttcagccg
     4501 ggaagaattt gaactctttc aaaccgtagt ccatacccag catcagttcg gaaacagtgc
     4561 tgatccccgg aattagagga atagtccctt cggtagcagc tttcagcagc ggctcggtca
     4621 gacccgggct aattgcgaac tgtgcacccg cttcagtgac ttctgccagc tgctgtggat
     4681 tcagcaccgt accggcaccc acaatcgctt caggcacttc tttggcgata gcacggatag
     4741 cgtcaactgc acactcggta cgcagagtca cttccagaac gcgcacccca ccagcaacca
     4801 acgcttttgc catcggcact gcgtgttcca gtttttttac cacgataacc ggtacaaccg
     4861 ggccggtggt caggattgat tctgcacttg ttttccagtt tttcatcaga gttttctctc
     4921 gcctgattac aaatttgtcg tcttaaaaag tgatacaggt tgcgccctgt tcggcaccgg
     4981 acagtttttc acgcaaggcg ctgaataatt cacgtcctgt ccccacgcgt gacgcgctca
     5041 ggtcaggaat gtgcggttcg cgagcagcca gttccgcttc gtctaccagc agcgtcagtt
     5101 cgcctgtctg tccattcaca cgaatgatgt ccccgtcgcg cacttttgcc agcagcccgc
     5161 catcgtaggc ttctggtgtt acgtggatag ctgacggcac tttacctgaa gcgccggaga
     5221 gtcgtccatc ggtaactaac gcaattttga aacgccggtc caataataca ccaagtggcg
     5281 gcatgagttt atgtaattct ggcattccgt tcgcttttgg cccctgatga cggacaacaa
     5341 cgacacaatc gcggtccagc aaacccgctt caaaggccgg cataacgtca tgctggcttt
     5401 caaaaacaac cgctggcgct tcaatcacct ggttctcaac cggcacggca gaggttttca
     5461 taaccgcacg gcccaggtta ccgcttaaca cttttgtccc accatgatga gagaaaggtt
     5521 gttcgaagga agcgatcaca ttgctgtcga gtgatttttc cgccccttcc cgccagtcca
     5581 gttcaccatt attcagccat ggttcaaggg tataacgaga cagaccaaag cctgccaccg
     5641 tattgacatc ttcatgcagc aggcctgctt tgagcagttc acgcaccaga accggtacgc
     5701 cacctgccgc ctggaagtgg ttaatatcgg ccggaccgtt cgggtagaga cgtgccatca
     5761 gcggtacaac atcagaaagg tcagagaagt catcccagtt aatctgaata ccggcctcgc
     5821 gcgccatcgc caccaggtgc atggtgtggt tagtggaacc actggtcgcc agcagtgcaa
     5881 cgataccgtt caccaccact ttctcatcga tcatcttacc gatcggcatc cattcattac
     5941 cattaccggt catgcgtgta acctgacgcg cagcggcagc ggtcaaagca tcgcgcagcg
     6001 gagaatccgg atgaacaaaa gaagagcctg gcgactgcat ccccataaat tccaccacca
     6061 tctggttggt gttggcagta ccgtagaaag tacatgttcc cggcgcatgg taagacgcgg
     6121 cttctgactc cagtaaggcc atgcggtcca ctttaccttc ggcataaagc tggcgaatac
     6181 gcactttttc tttatttggc aaaccgcttg ccatcggtcc agacggcaca aacaccgcag
     6241 gcaaatgacc aaacgacagg gctgccatcg tcagacccgg gacaatcttg tcgcacacac
     6301 cgaggaacag agcaccatca aacatgttat gggacagccc caccgccgca gacatcgcta
     6361 tcacttcgcg gcttagcagc gacaattcca ttccatcctg cccctgggtg acaccatcac
     6421 acatcgccgg aacaccgccc gcaacctgac caaccgcatt cgcttcatgc agggctttac
     6481 gaatgatttc tggatagtgt tcataaggct ggtgcgcgga gagcatgtcg ttataggagg
     6541 tgatgatggc gatattgtta cgcaacatgc ttttcaaaga ggctttgtct tctggctggc
     6601 aggcagcgaa accgtgtgcc aggttaccgc atgccaactg cgaacgatga acggtcgacg
     6661 ttttcgcttg ttctatccgg gcgagataag cagagcgagt ctcgcgcgaa cgttcaatga
     6721 ttcgatttgt tacgcgtaac aattgtggat tcataaaggc tcctgaaatt gagttgtcag
     6781 agcaggatga ttcacaacgc gtttcattca gaggatttat gagtgaaacg cctgtaaccg
     6841 gagctcatag ggcaaaaacg tttcagtcag tgtaataaaa aaagcctcgt gggtgaatcc
     6901 gcacgaggcc tgaaagtgta aaaattgttc tacaatctgt gcaagatcat gttaccggta
     6961 aaataaccat aaaggataag cgcagatatt actcaaactc attccaggaa cgaccatcac
     7021 gggtaatcat cgccaccgag gcaacgggtc cccaggttcc ggcctgatac ggtttcggcg
     7081 catcattgtc catcgcccac gcctcagtaa tggagtctac ccatttccag gcttcttcca
     7141 cttcatcacg acgtacaaac agtgcctgaa taccacgcat ggtttccagc agcagacgtt
     7201 cataggcatc cgccagatgc gtctgattaa aggtttctga atagctcaga tccagcttgg
     7261 tgatttgcag gttatgtttg tggtcaaggc caggaacttt attcagtacc tggatatcca
     7321 cgccttcatc aggttgcaga cggatagtca gtttattctg cggcagatcc tgccacgact
     7381 ctttaaacag attcagttca ggtgttttga aatagaccac gacttcagaa catttggtcg
     7441 gcagacgttt accagtacgc aggtagaatg gcacaccggc ccagcgccag ttatcaatgt
     7501 cgacgcggat cgccacgaag gtttctgtat tgctgctctt gttcgcaccc tcttcttcca
     7561 gatatcccgg cacttttttg ccctgggcga agcccgcagt atattgccca cgtacggttt
     7621 tttcgcgtac gttggagcgg tcgatgcggc gcagggactt cagtactttc actttttcat
     7681 cgcggatgct gtctgcgctc aggtcagatg gcggagacat cgcaatcatg cagagaattt
     7741 gtagcaggtg gttctgaatc atgtcacgca tctgaccggc tttatcaaaa tagccccagc
     7801 gcccttcgat ccccacttct tctgccacgg taatctcaac atgatcaatg gtgcgattgt
     7861 cccagttatt cacaaacagg gagttagcaa aacgcagcgc caacaggttc agcaccgttt
     7921 ctttaccaag atagtggtcg atacggtaaa cctggcactc ctcgaagtat tcgccaacct
     7981 gatcattgat ttcctgcgag gtcgccagcg acgtccccag cggtttctcc atgactacgc
     8041 gtgccggttt agcattcagt tttgcctcgc caagcccttt gcaaattgcg ccaaaagtgc
     8101 tgggcggcat ggcaaagtag ttaatggtga tacgattttt ttgatccagc atcgcgccga
     8161 gacggttgaa tgcagcagtg tcattgacat cgagattaca aaaatccaga cgtgcactca
     8221 gggtgtccca taaaccttca tcaatggttt ctttcatgaa agtttcgagc gcctcgcgga
     8281 caactttggt atatgccgct ttatcccagt cagcacgccc tacgccgata atccgggtgt
     8341 ccgggttgag ctgaccggct ttttccagtt gatacaggga aggcagcaat ttacgacgcg
     8401 caaggtcgcc tttcgcgccg aaaatgacca ggtcacaggc ctgggctgtt tgcgttaccg
     8461 ccatgtcatt ctccttaagt taactaaccc ggtacttaag ccagggtata cttgtaattt
     8521 tcttacggtg cactgtactg cttttacgag cttgcgaaaa ctgtaaacgc ttatccaccc
     8581 gtgcgattac gggaaaagcg cgcaaagcgc ggcaaaactg ataaaaaatc atcgttttcc
     8641 attcggtaaa aatctgacac tgatcatgtt atgaaaaaaa ataacaactt ttttatctgc
     8701 ttttgtcatt aacacggcac acaggcgtaa tatctgacaa aactgcattt cgatttcttt
     8761 cagtgcggaa atcgtcatta cccgtgagtc tctttacatc atgaatatgc tggaaaaaat
     8821 ccagtctcag ctggaacatt tgagcaaatc agagcgcaaa gttgccgagg tcattctggc
     8881 ttcgcccgat aacgcgatcc attcgagtat tgctgctatg gcactggaag ccaatgttag
     8941 cgaaccgacg gtgaatcgtt tctgtcgcag catggacacg cgcggttttc ctgattttaa
     9001 acttcatctg gcacagagtc tggcgaatgg cactccctat gttaatcgca atgtcaatga
     9061 agatgacagc gttgaatcat acacagggaa aatatttgag tccgcaatgg caacgcttga
     9121 tcatgtccgt cattcactgg ataaatctgc catcaaccgc gccgtcgact tgctcactca
     9181 ggcaaaaaaa atcgcctttt tcggattagg ctcttcagcc gccgttgccc acgatgcgat
     9241 gaataagttc tttcgtttta atgttccggt ggtgtactcc gatgatatcg tgctgcaacg
     9301 catgagttgt atgaattgta gcgacggaga cgtggtggtg ctgatttctc acactggaag
     9361 aacaaaaaat ctggtcgagc tggcgcagct ggctcgcgaa aacgacgcaa tggtgattgc
     9421 cctcacctct gcgggtaccc cgctcgcccg ggaagcaacg ctggcaatta ccctcgacgt
     9481 accggaagat actgacattt atatgcccat ggtttctcga cttgcacagc tgaccgtgat
     9541 agatgtgctg gcgacaggat ttactttgcg acgcggtgca aaattcagag ataacttgaa
     9601 gcgggtcaag gaagcgctga aggaatcgcg ttttgataag cagttactta atttaagtga
     9661 cgatcgctaa aaacgactgt cactgtccta atcttatacg acatccgaat gagattaatt
     9721 tatcgccatc gcggcgttat ttcattcgga tttcatgttc aagcaacacc tggttgtttc
     9781 agtcaacgga gtattacatg tccagaaggc ttcgcagaac aaaaatcgtt accacgttag
     9841 gcccagcaac agatcgcgat aataatcttg aaaaagttat cgcggcgggt gccaacgttg
     9901 tacgtatgaa cttttctcac ggctcgcctg aagatcacaa aatgcgcgcg gataaagttc
     9961 gtgagattgc cgcaaaactg gggcgtcatg tggctattct gggtgacctc caggggccca
    10021 aaatccgtgt atccaccttt aaagaaggca aagttttcct caatattggg gataaattcc
    10081 tgctcgacgc caacctgggt aaaggtgaag gcgacaaaga aaaagtcggt atcgactaca
    10141 aaggcctgcc tgctgacgtc gtgcctggtg acatcctgct gctggacgat ggtcgcgtcc
    10201 agttaaaagt actggaagtt cagggcatga aagtgttcac cgaagtcacc gtcggtggtc
    10261 ccctctccaa caataaaggt atcaacaaac ttggcggcgg tttgtcggct gaagcgctga
    10321 ccgaaaaaga caaagcagac attaagactg cggcgttgat tggcgtagat tacctggctg
    10381 tctccttccc acgctgtggc gaagatctga actatgcccg tcgcttggca cgcgatgcag
    10441 gatgtgatgc gaaaattgtt gccaaggttg aacgtgcgga agccgtttgc agccaggatg
    10501 caatggatga catcatcctc gcctctgacg tggtaatggt tgcacgtggc gacctcggtg
    10561 tggaaattgg cgacccggaa ctggtcggca ttcagaaagc gttgatccgt cgtgcgcgtc
    10621 agctaaaccg agcggtaatc acggcgaccc agatgatgga gtcaatgatt actaacccga
    10681 tgccgacgcg tgcagaagtc atggacgtag caaacgccgt tctggatggt actgacgctg
    10741 tgatgctgtc tgcagaaact gccgcagggc agtatccgtc agaaactgtt gcagccatgg
    10801 cgcgcgtttg cctgggtgcg gaaaaaatcc cgagcatcaa cgtttctaaa caccgtctgg
    10861 acgttcagtt cgacaatgtg gaagaagcta ttgccatgtc agcaatgtac gcagctaacc
    10921 acctgaaagg cgttacggcg attattacca tgaccgaatc gggtcgtacc gcgctgatga
    10981 cctcccgtat cagctctggt ctaccaattt tcgccatgtc gcgccatgaa cgtacgctga
    11041 acctgactgc tctctatcgt ggcgttacgc cggtgcactt tgatagcgct aatgacggcg
    11101 tagcagctgc cagcgaagcg gttaatctgc tgcgcgataa aggttacttg atgtctggtg
    11161 acctggtgat tgtcacccag ggcgacgtga tgagtaccgt gggttctact aataccacgc
    11221 gtattttaac ggtagagtaa tctcacctgc cccggccgct gatggccggg gtatttagca
    11281 acacataaat taggactact tattcaatcc aatcataatc acagccccct gtaaaatgaa
    11341 tacagggata gcctgaatgg agatctaaat agcttgcaag acgtcgcata cccgcttcct
    11401 ctgcaacact atgtccaata actgccatcg gtaagccact atctttggag tattgtgtct
    11461 gcacccatgt tttaattgaa tcgttaatcg taatataata atcagcctga tattccatat
    11521 attgtattgg atcacaaaaa cagcctgccc caatgccaac agttctgact actct
//
LOCUS       DADMIB010000135        11485 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.135, whole genome shotgun sequence.
ACCESSION   DADMIB010000135 DADMIB010000000
VERSION     DADMIB010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11485
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.135"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..154
                     /locus_tag="JNZ89_003299"
     CDS             <1..154
                     /locus_tag="JNZ89_003299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8937075.1"
                     /translation="LQLCRNDSLMIGRESFSVDRITPDDGGCSYIRLRREGAGNVRAG
                     GYYEGA"
     gene            141..728
                     /locus_tag="JNZ89_003300"
     CDS             141..728
                     /locus_tag="JNZ89_003300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001214489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8937076.1"
                     /translation="MRGLENAIRNLNSLDTRMVPQASAWAVNRVAAKVVSVATRQVAR
                     NTVAGDNQVKGGPLKLVRQRVRVFKASPAGKMYARIRVNRGNLPAIKLGTTCRRAGDG
                     LKVGKYFFRGAFIQQLANGRWHVLRRLPEACFETGKDSKGRPRKNRLPVEVVKIPLAG
                     PLTQAFEDARDRIIAAEMPKQLGYALKQQLRIHLG"
     gene            725..1126
                     /locus_tag="JNZ89_003301"
     CDS             725..1126
                     /locus_tag="JNZ89_003301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8937077.1"
                     /translation="MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVW
                     LSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELDTWMENTIFPAMKDIPVLSGLID
                     TMIPLGFNYQRDNEMATWAMAEITYQITYTN"
     gene            1137..1877
                     /locus_tag="JNZ89_003302"
     CDS             1137..1877
                     /locus_tag="JNZ89_003302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707740.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8937078.1"
                     /translation="MTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKD
                     LQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTLATLAWRPGDSGQKKLVQLFDS
                     GEVCAFRIKYPNGTVDVFRGWLSSLGKTITSKEVMTRTVKISGVGRPYLAEEGAETVG
                     VTGLTVAPASVSVKAGATTTLTFTVKPDGASDKAISVHSSDPQTASVTLSGLVATVKG
                     VKQGSVSIVGMTSDGEFVAVAAVTVSAP"
     gene            1936..2322
                     /locus_tag="JNZ89_003303"
                     /pseudo
     CDS             1936..2322
                     /locus_tag="JNZ89_003303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707739.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
     gene            2331..2659
                     /locus_tag="JNZ89_003304"
                     /pseudo
     CDS             2331..2659
                     /locus_tag="JNZ89_003304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308863.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
     gene            2631..5672
                     /locus_tag="JNZ89_003305"
     CDS             2631..5672
                     /locus_tag="JNZ89_003305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8937079.1"
                     /translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAAGDAERSSARMQ
                     RFMERQTQAARQTMHAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQK
                     MREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQ
                     DYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGV
                     SSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRA
                     GWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEEFNRQLALTGHYAGVTVG
                     QLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDT
                     INQFKRLKDDPVNAAKALDNALHFLTATQLEQIRVLGEQGRSSDAARIAMSALAEETG
                     KRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYP
                     WTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNET
                     EAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYS
                     QQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKN
                     ELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGD
                     KQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRAEEVLKGSLKRQLNENKR
                     YWQELEVAQGDWKNGAMRAFQNFTADADNAVGTAEQMFTVAFSSAGNALATFCTTGKL
                     NFKSFTSSLLSDMARIMAQMAMMQAVKGVGSLFGFTTNADGGVYQSADLSRYSGTVVN
                     RPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADTGGSGMVMFAPQYNIGINND
                     GTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR"
     gene            5672..6001
                     /locus_tag="JNZ89_003306"
     CDS             5672..6001
                     /locus_tag="JNZ89_003306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8937080.1"
                     /translation="METFRWKVRPDMNVVSEPKVVAVKLGDGYEQRRPAGLNNLLSTY
                     SVTIRVRKGEHPPLKAFLERHGGVRAFQWTPPYDWKPIRVACRKWSASVGALWVTVTA
                     DFEQVVN"
     gene            6001..6700
                     /locus_tag="JNZ89_003307"
                     /pseudo
     CDS             6001..6700
                     /locus_tag="JNZ89_003307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706643.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            6705..7448
                     /locus_tag="JNZ89_003308"
     CDS             6705..7448
                     /locus_tag="JNZ89_003308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8937081.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVRTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEAT
                     GLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHREWHASAFTGICNDLAAASTFV"
     gene            7385..7987
                     /locus_tag="JNZ89_003309"
     CDS             7385..7987
                     /locus_tag="JNZ89_003309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY8937082.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQAVLGAAVMAVA
                     IWMPGVGIMASNLLFSLGASMTLGGVAQMLAPKARTPRTQTTDNGKQNTCFSSLDNMV
                     AQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            8048..>11485
                     /locus_tag="JNZ89_003310"
     CDS             8048..>11485
                     /locus_tag="JNZ89_003310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY8937083.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVDGPVDGLKS
                     VLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGFESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRLTFSVQALVENTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMVWCR
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
                     KDRHNVVEVNWIDPDNGHETATELVEDAQAILRYGRNVTKMDAFGCTSRGQAHRAGLW
                     LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLD
                     REITLPSSCTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTL
                     RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGVTPPAVQHL
                     TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTTETTYRFRQ
                     LALGNYSLTVRAVNARGQQGDPASVSFRIAAPAAPVTIELIPGYFQITAVPKLAVYDP
                     TVQFEFWFSEKRIADIRQVETSARYLGTALYWIAASINIRPGHDYYFYVRSVNTVGKS
                     AFVEAVGRASDDAEGYLSFYKGLINNTHLGKELWTQIDNGQLAPDLTEIRTSITNVSN
                     EITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAGIEN
                     TPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNP
                     PAFSLTPGGRLTAKNADISGNVNANSGTLNNVTINKNCRVLGKLSANQIEGDLVKTVG
                     KPFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFRGAKHERKNNNIYSSCSLI
                     VKKNGAEIYNRTTLDNTLIYTGVIDMPAGHGHMTLEFSVSAWLVNGWYPTASISDLLV
                     "
BASE COUNT         2691 a         2719 c         3699 g         2376 t
ORIGIN      
        1 tttacagctg tgtcgcaatg attcgctgat gattggccgg gagtctttca gcgtggatcg
       61 tattactcct gatgacggcg gatgtagtta tatccggttg cggcgtgaag gagcaggaaa
      121 cgtaagggca gggggatatt atgagggggc ttgagaatgc catccgcaat ctgaacagtc
      181 ttgatacccg tatggtgccg caggccagcg catgggcagt aaaccgggtt gctgcaaaag
      241 ttgtctcggt tgccacccgg caggtcgcca ggaataccgt tgcgggagat aaccaggtga
      301 aggggggccc cctgaaactg gtgcgtcagc gcgtccgggt atttaaagcc agtccggcag
      361 gaaaaatgta tgcccgtatc cgtgttaacc ggggcaatct gcccgccatt aagcttggca
      421 caacatgccg gcgtgccggt gacggactga aggtggggaa atactttttt cgtggtgcgt
      481 ttatccagca gctggcgaac ggtcgctggc atgttctcag gcgtcttcct gaagcgtgtt
      541 ttgaaacagg aaaggacagt aaggggcggc ccagaaaaaa tcgtctgccc gtggaggttg
      601 tgaaaattcc gctggccgga ccgctgacac aggcatttga ggatgcccgc gaccgcatca
      661 ttgccgcgga aatgccgaaa cagctggggt atgccctgaa acagcaactg aggatacatt
      721 tgggatgaac aggcacacac aaatccgcca ggcagtactg gcaagcctga agggcgaatg
      781 cggggggaat gtcgtgcttt ttgacgggct tccggcattt attgatgcgc aggaactgcc
      841 cgccgtggcg gtgtggctga gtgatgcgca gtacaccgga aaaatgacgg atgaggacga
      901 ctggcaggct gttctgcata ttgccgtttt cgtccgtgca caggcgccgg attctgagct
      961 ggatacgtgg atggagaaca ccatatttcc ggccatgaag gatattccgg tgctttccgg
     1021 actcatcgac accatgatcc cactcggttt taactatcaa cgtgataatg agatggccac
     1081 ctgggcgatg gcggaaatca cgtaccagat cacgtacacg aattaaggag gtggcaatga
     1141 ccacaccaaa tccactggca aagacgaaag gtgcgggaac gacgttctgg atgtacaccg
     1201 gcaagggcga tgcgtttgcg aaccctttgt cggacactga ctggctgcgt cttgcgatgg
     1261 tgaaggatct gcaacctggc gaaatgaccg ctgatgcaga agatgacact tatctcgatg
     1321 atgaagatgc agactggaaa acgacaaccc aggggcagaa atccgtcggt gatactttgg
     1381 cgacgctggc ctggcgtccg ggtgacagcg ggcagaaaaa actggttcag ttgttcgatt
     1441 ccggtgaagt ctgcgcgttt cgtatcaaat accccaacgg tacggttgat gttttccgtg
     1501 gctggctgag ttcactgggt aaaaccatta cctcaaaaga ggtgatgacc cgtactgtaa
     1561 aaatcagcgg tgtggggcgt ccgtatctgg cagaggaggg cgctgaaacc gtgggtgtta
     1621 ccggactgac ggtggcaccg gcatctgtca gtgtcaaagc gggagcaacc accacactga
     1681 cctttacagt aaaacctgac ggggccagtg acaaagcgat cagtgtgcat tcgtcagatc
     1741 ctcagactgc ttcggtgacc ctgagcgggc ttgtggccac ggtgaaaggc gtgaagcagg
     1801 gcagtgtcag catcgtgggc atgacctctg acggagagtt tgtggcagtg gctgcggtga
     1861 ccgtcagcgc accataacag gacgatactc atcattgccc cggttatccg gggctttttg
     1921 catccggaga acatgatgtt tctgaaacag gatacgttta attatgaaaa acagtccgtg
     1981 gtgctcagtg agctgtccgg gctgcagaga attgaatatc tgacgtttgt tcagcagcga
     2041 acggcaaagt ttgatgcaca ggagggagaa ctgccggagg ctgaacgaca gattgctttt
     2101 ctgcgtatgg gaatggatat caatgcctgg ctggtttccc gctcactgtg gaatgctgag
     2161 cagtctcagg atgttgagac gctttgagca tccattatga caacatggtc gtatgatgcg
     2221 ctgggcgcgg gggcggagag ggttctgtcg ctgagcggta tggggaccat tgagaatgcc
     2281 ggggatgatg atcatgaggc gctgacgccg gaaaagtcct gacgcgggaa atgcagtttg
     2341 tcatgcggct tgcccgggag ttccggcggg cagactggcg gcggatgctg tcggaaatgt
     2401 cggccactga gcttggtgag ggggcgatta tttccggatg cagagcttca gtgatgtgtg
     2461 gatggatgcg cagtttgcct cgctgaaggc attgatcgtg agaatggtgt ccggcagcag
     2521 tgatgctgcg gtggctgatt tcagcctttt accggaagag aacgggatac cggagcgaac
     2581 ggacgaagaa ctgatgcatc ttggggaagg tatttccgga ggtgtgcgtt atggaccaga
     2641 tagccaacct ggtcattgat ttggggattg atgcggcaga gtttaaaaat gaaattcccc
     2701 gtatcaaaaa ccttctgaat ggtgcagccg gtgatgcaga acggtcttct gcccgtatgc
     2761 agcgttttat ggagcgtcag actcaggcgg cccggcagac aatgcatgcg gcttcttcgg
     2821 ctgcaacagc agcatcagcc catgcgcaga cggtggagaa gaatgcacgg gctcatgaac
     2881 gcatggcccg tgaggtggaa caaacccgtc tgcgcgtgga tgccctgaat cagaaaatgc
     2941 gcgaggaaca ggcgcaggcc agggcactgg cggaggcgca ggataaagcg gctgccgcct
     3001 tttatcgcca gattgacagt gtgaaacagg ccggtgcggg gcttcaggaa ttacagcgta
     3061 ttcagcagca gatccgacag gccagaaaca gtggcggggt tggtcagcag gattatctgg
     3121 cgctgatttc ggagatcacg gcgaaaaccc gtgccctgac gcaggcagag gaacaggcca
     3181 cccggcagaa agcggcgttt atccgccagc ttaaagagca ggcaacccgc cagaatctgt
     3241 cgtcttctga gttgcttcgc gccagggcgg ctcagctggg ggtaagcagt gctgcagaag
     3301 tgtatatccg caaaatggag cgggcaggaa aagccacaca ttcgctgggg ctgaaaagtg
     3361 cggcagcccg gcgggagctg ggggtgttaa tcagtcagat ggcgcgcggc aattttggtg
     3421 cgctgagggg atccgggata acgctggcta accgtgccgg atggacaggc gcactgatgt
     3481 cgccgaaagg catgatgact ggcggcgtta ttggcggact tgtcgcggcg gtcctgggtc
     3541 tgggtaaagc ctggcatgac ggccggaagg agggcgagga atttaaccgt cagctggcgc
     3601 tgacgggaca ttatgccggt gtcactgtcg ggcagttgtg gaaactcagc cgggccatat
     3661 ccgggaatgg tatcacgcaa catgcggcag ccggtgcgct ggcacaggtg gtgggcagtg
     3721 gggcatttca tggaaacgat attggtatgg tggcgaaagc tgccgcacag atggagcgat
     3781 cggttggcca gtcggtcagc gataccataa atcagtttaa gcggctgaag gatgatcctg
     3841 taaatgccgc gaaggcgctg gacaatgcgc tgcatttttt gactgccact cagcttgagc
     3901 agatacgcgt ccttggggag caggggcggt ccagtgatgc ggcccggatc gccatgtctg
     3961 cgctggcaga ggaaaccggt aaacgcacat ctgatattga taataatctc aatgcgctgg
     4021 gtagtacgct gcaaaccttg tctgactggt ggaagcagtt ctgggatgcg gccatgaata
     4081 ttggtcgtga agactcgctg gatgcgcaga ttgatgcgtt acaggaaaaa attcagcgcg
     4141 cgaaaaaata tccgtggaca aacgcctcca cacaggtgga gtacgatcag cagcgtctta
     4201 acgatcttca ggagaaaaaa cgccggaagg atttgcagga tgcaaaagcg caggcagaac
     4261 ggaattacca ggagcaacag aaacgccgga atgctgaaaa tgccgcgctg aaccggatga
     4321 atgaaacgga agctgcacga catcagcggg aaattgcgcg tattaatgcc atgcagtacg
     4381 ccgaccaggc tgtcagggat gcggcgatac agcgtgaaaa tgaacgttac gaaaaagcca
     4441 ttaagaaaaa tacacgggca acccgtaatg atgaggccac ccggttattg ctgcagtaca
     4501 gtcagcagca ggcacaggtg gaagggcaga ttgctgctgc cagacagtca gcaggcattg
     4561 ccactgaaag gatgactgaa gcgcataaac agcttctggc cctgcagcag cgcatcagcg
     4621 acctggacgg gaaaaagctg acggcagatg aaaagagtgt gctggcccgt aagaatgagc
     4681 tgattcaggc gctgacgctg ctggatgtga aacagcagga gctgcagaaa cagacagcgc
     4741 ttaacgacct gagaaaaaaa acggttcagc tgaccagcca gctggcagac aaagaacgtg
     4801 cactgcgtga gcagcacaat ctggatattg ccactgcagg tatgggggat aagcagcggc
     4861 agcgctacca ggcacagttg cgcatccggc aggaataccg gcaacagttg caacagcttg
     4921 agaatgacag tcgccagaaa ggcacttacg ggacggagga ctaccggagg gctgaggagg
     4981 tgctgaaggg gagcctgaag cgacaactga atgaaaacaa acgctactgg caggaactgg
     5041 aagtggcgca gggcgactgg aaaaacggtg ccatgcgggc gtttcagaat tttacggcgg
     5101 atgcggataa tgcggtggga acggcagaac agatgtttac agtggcattc agcagtgccg
     5161 gtaatgcact ggcgacattc tgtaccaccg gtaagctgaa ttttaaatcc ttcacctctt
     5221 ccctgttgtc agatatggcc agaattatgg cacagatggc catgatgcag gcggtaaagg
     5281 gcgtcggctc tttattcggc ttcacgacta atgctgatgg cggtgtttac cagtctgctg
     5341 atttgagtcg ctacagtggc acggtggtta accgtccgac gttttttgct tttgcaaaag
     5401 gcgcgggtgt gatgggggaa gcgggacctg aagccattct gccactgcgt cgcggtgctg
     5461 atggtaagct gggggttgtg gcggatactg gtggttcagg catggtgatg tttgccccgc
     5521 agtacaacat cgggatcaat aacgacggca cgaacgggca gataggtccg gcagcactga
     5581 aggtggttta tgacctcggg aaaaaagcgg ccgcggactt tatgcaacag caggcccgtg
     5641 atggtggccg gttaagtgga gcataccggt aatggagacg tttcgctgga aggtgcgccc
     5701 ggatatgaat gtggtatcag agccaaaagt ggtggcagtg aagctgggtg atggttatga
     5761 acagcgtcgc ccggcgggac tgaataatct gctgtcgact tacagcgtga cgatacgtgt
     5821 tcgtaaaggt gaacacccac ctttaaaagc ctttctggaa cggcacggtg gcgtccgcgc
     5881 atttcagtgg acgccacctt atgactggaa accgatcagg gtggcttgtc gtaaatggtc
     5941 ggcaagcgtg ggggcgttat gggtgactgt aacggccgat tttgaacagg tggtgaactg
     6001 atgcaggata tccggcagga aacactgaat gaatgcaccc gtgcggagca gtcggccagc
     6061 gtggtgctct gggaaatcga cctgacagag gtcggtggag aacgttattt tttctgtaat
     6121 gagcagaacg aaaaaggtga gccggtcacc tggcaggggc gacagtatca gccgtatccc
     6181 attcaggggg agtggttttg aactgaatgg caaaggcacc agtacgcgcc ccacgctgac
     6241 ggtttctaac ctgtacggta tggtcgccgg gatggcggaa gatctgcaga gtctggtcgg
     6301 cggaacggtg gtccggcgta aggtttacgc ccgttttctg gatgcggtga acttcgtcaa
     6361 cggaaacagt gacgccgatc cggagcagga ggtgatcagc cgctggcgca tcgagcagtg
     6421 cagcgaactg agcgcggtca gtgcctcttt tgtgctggcc acaccaacgg agacggatgg
     6481 cgcggttttc ccggggcgta tcatgctggc gaatacctgt atgtggacct accgttctga
     6541 tgagtgtggt tacacgggca gggcagtggc tgacgagttc gacaaaccaa cgacggatat
     6601 ccggaaggac aaatgcagca agtgtatgcg cgggtgtgag ttgcgcaaca ataccggtaa
     6661 tttcggcggt ttcctttcca tcaataaact ttctcagtaa atccatgaca cagacagaat
     6721 cagcgattct ggcgcacgcc cggcgatgtg cgccagcgga gtcgtgtggc ttcgtggtga
     6781 gaacgccgga gggggagcgg tatatccctt gtgtgaatat ttctgcagag ccggaggcgt
     6841 attttcgtat cgcaccggaa gactggctgc gggcagagat gcagggggag attgtggcac
     6901 tggtccacag tcatcccggt ggtctgccct ggctgagtga ggctgaccgg cggctgcagg
     6961 tgcagagtga tttgccgtgg tggctggtct gccggggggc gattcacaag ttccgctgtg
     7021 tgccgcatct caccgggcgg cgctttgagc acggggtgac ggactgttac acgctgttcc
     7081 gggatgctta tcatctggcg gggattgaga tgccggattt tcatcgcggg gatgactggt
     7141 ggcgtcacgg tcagaatctc tatctggata atctggaggc cacagggctg tatcaggtgc
     7201 cgttgtcatc agcacaaccg ggcgatgtgc tgctgtgctg ttttggttca tcggtgccga
     7261 atcatgccgc catttactgc ggcgacggtg agctgctgca ccatattcct gaacaactga
     7321 gtaaacgaga gaggtatacc gacaaatggc agcgacgcac acactccctc tggcgtcacc
     7381 gggaatggca cgcatctgcc tttacgggga tttgcaacga tttggccgcc gcatcgacct
     7441 tcgtgtgaaa acgggggctg aagccatccg cgcactggcc acacagctcc cggcgtttcg
     7501 tcagaaactg agtgacggct ggtatcaggt gcgcattgcc gggcgtgatg caggtgaaac
     7561 cgaattgtct gcccgtctta atgagccgct ggcaaatggt gcagtgatcc acatagtacc
     7621 gcgtctggtg ggagctaaaa gtggcggtgt gtttcaggcg gtgctggggg cagctgttat
     7681 ggcggttgct atatggatgc cgggggtagg aattatggcg agtaatctgc tgttttctct
     7741 cggtgccagt atgacgcttg gcggtgttgc acagatgctg gcaccgaaag ccagaactcc
     7801 ccgtacacag acaacggata acggcaaaca gaacacctgt ttctcctcac tggataacat
     7861 ggttgcccag ggcaatgttc tgcctgttct gtacggtgaa atgcgcgtgg ggtcgcgggt
     7921 ggtatctcag gagatcagca cggcagacga aggggatggt ggtcaggttg tggtgattgg
     7981 tcgctgatgc aaaatgtttc atgtgaaacc gcctgcgggc ggttttgtcg tttatggagc
     8041 gtgaggaatg ggtaaaggca gcagtaaggg gcataccccg cgcgaagcga aggacaacct
     8101 gaaatccacg cagttgctga gtgtgattga tgccatcagc gaagggccgg ttgacggtcc
     8161 ggtggatgga ttaaaaagcg tgctgctgaa cggtacgcca gtcctggaca gcgaggggaa
     8221 gacaaacttt tccggtgtta cggtggtgtt ccgcgccggc gagcaggagc agacaccgcc
     8281 ggaggggttt gaatcttccg gctcagagac tgtgctgggt acggaagtga aatacgacac
     8341 gccgatcacc cggaccatca cgtcggcaaa cattgatcgt ctgcgcctga ccttcagtgt
     8401 gcaggcactg gtggaaaaca cctcaaaggg ggaccggaat ccgtcggaag tccgcctgct
     8461 ggttcagata cagcgtaacg gtggctgggt gacggaaaaa gacatcacca ttaagggcaa
     8521 aaccacttcg cagtatctgg cctcggtggt ggtgggtaac ctgccgccgc gcccgtttaa
     8581 tatccggatg cgcaggatga caccggacag caccacagac cagctgcaga acaaaacgct
     8641 ctggtcgtcg tacaccgaaa tcatcgatgt gaaacagtgc tacccgaaca cggcgctggt
     8701 cggcgtgcag gtggattcag agcagttcgg taaccagcag gtgagtcgca attatcatct
     8761 tcgcgggcgc attctgcagg tgccgtcgaa ctataacccg cagacgcggc aatacagcgg
     8821 tatctgggac ggaacgctta agccagcata cagcaacaac atggtctggt gtcggtggga
     8881 catgctcact catccgcgct acggcatggg gaaacgtctt ggtgcggcag atgtggacaa
     8941 atgggcgctg tatgtcatcg gccagtactg cgaccagtca gtgccggacg gatttggcgg
     9001 cacggagccg cgcatcacct gtaacgctta cctgaccaca cagcgtaagg cgtgggatgt
     9061 tctcagtgat ttctgctcgg cgatgcgctg tatgccggta tggaacgggc agacgctgac
     9121 gttcgtgcag gaccgaccgt cggataaagt gtggacctat aaccgcagta atgtggtgat
     9181 gccggatgat ggcgcgccgt tccgctacag cttcagcgcc ctgaaggacc gccataatgt
     9241 cgttgaggtg aactggattg atccggacaa cggtcatgag acggcgacag agcttgtgga
     9301 ggacgcgcag gccattctcc gttacggtcg taacgtcacg aagatggatg cctttggctg
     9361 taccagccgg ggacaggcgc accgcgccgg gctgtggctg attaaaacgg aactgctgga
     9421 aacgcagacc gtggacttca gcgtcggcgc agaagggctt cgccatgtac cgggtgatgt
     9481 cattgaaatc tgcgatgatg attatgccgg tatcagcacc ggtggtcgcg tactggcggt
     9541 gaacagccag acccggacgc tgacgctcga ccgtgaaatc acgctgccgt cctcctgtac
     9601 cacgctgata agcctggttg acggaaatgg caatccggtc agcgtggagg ttcagtccgt
     9661 caccgacggc gtgaaggtga aagtgagccg ggttcctgac ggcgttgcag aatacagcgt
     9721 gtgggggctg aagctgccga cgctgcgcca gcgcctgttc cgctgcgtga gtatccgtga
     9781 gaacgacgac ggcacgtatg ccatcaccgc cgtgcagcat gtgccggaaa aagaggccat
     9841 cgtggataac ggggcacact ttgacggtga ccggcgcggc acggtgaatg gtgtcacgcc
     9901 gccagcggtg cagcatctga ccgccgaagt caccgcagac agcggggaat atcaggtgct
     9961 ggcgcgatgg gacacgccga aggtggtgaa gggtgtgagc ttcctgcttc gcctgaccgt
    10021 ggcagcggac gacggcagtg agcggctggt cagcacagcc aggacgacgg aaaccacata
    10081 ccgcttcagg cagctggcgc tggggaatta cagtctgaca gtccgggcgg taaatgcccg
    10141 ggggcagcag ggcgatccgg cgtcggtatc gttccggatt gcggcaccgg cagcgcctgt
    10201 cactattgaa ctgataccgg ggtattttca gataacggcg gtcccgaaac tggctgtata
    10261 cgacccgacg gtgcagtttg agttctggtt ttcggaaaag cggattgcgg atatcaggca
    10321 ggttgaaacc agcgcccgct atcttggcac ggcgctgtac tggatagccg ccagtatcaa
    10381 tatcaggccg ggccatgatt attattttta cgttcgcagt gtgaacaccg ttggcaaatc
    10441 ggcatttgtg gaggccgtcg gtcgggcgag cgatgatgcg gaaggttatc tgagttttta
    10501 taaagggttg atcaataaca cgcatctcgg caaggagttg tggacgcaga ttgataacgg
    10561 tcagcttgcg ccggacctga ctgaaatcag gacgtccatt acgaatgtca gcaatgaaat
    10621 cacgcaaacc gtcaataaaa aactggaaaa tcagagtgct gcaatccagc agatacagaa
    10681 agttcaggtt gatacaaata ataacctgaa cagcatgtgg gctgtgaagc tgcaacagat
    10741 gaaggacgga cgcctttata ttgcgggtat cggtgccggt attgagaata cgccagcagg
    10801 aatgcagagt caggtgctgc tggcggcaga caggattgcg atgattaatc ctgcgaatgg
    10861 caacacaaag ccgatgtttg ttggtcaggg cgatcagata ttcatgaacg acgtgttcct
    10921 gaaacgcctg acggctccga ccattaccag cggcggtaat cctccggcat tttccctgac
    10981 acctggcgga cggctgacgg cgaaaaatgc cgatatcagc ggtaacgtga acgcgaactc
    11041 cgggacgctc aacaacgtca cgattaataa gaactgtcgg gttctgggaa aattgtccgc
    11101 gaaccagatt gaaggcgatc tcgttaaaac agtgggcaaa cctttcccac gggactcccg
    11161 ggcaccggag aggtggccat cagggaccat taccgtcagg gtttatgacg atcagccgtt
    11221 tgatcggcaa attgttattc ccgcggtggc gtttcgcggt gctaaacatg agcggaagaa
    11281 taacaatatt tattcgtcat gcagcctgat agtgaagaaa aacggtgctg aaatttataa
    11341 ccgaacgacc ctggataata cgctgatata tacgggtgtt attgatatgc ctgccggtca
    11401 cggtcacatg acgctggagt tttctgtatc ggcatggctg gtaaatggct ggtatcccac
    11461 agcaagtatc agcgatttgc tggtt
//
LOCUS       DADMIB010000136        11405 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.136, whole genome shotgun sequence.
ACCESSION   DADMIB010000136 DADMIB010000000
VERSION     DADMIB010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11405
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.136"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..921
                     /gene="gap"
                     /locus_tag="JNZ89_003311"
     CDS             <1..921
                     /gene="gap"
                     /locus_tag="JNZ89_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HAY8937084.1"
                     /translation="DVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKS
                     IAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTI
                     VYNVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYTGTQSLVD
                     GPRGKDLRASRAAAENIIPHTTGAAKAIGLEIPELSGKLKGHAQRVPVKTGSVTELVS
                     ILGKKATAEEVNNALKQATTNNESFGYTDEEIVSSDIIGSHFGSVFDATQTEITAVGD
                     LQLVKTVAWYDNEYGFVTQLIRTLEKFAKL"
     gene            complement(963..2403)
                     /gene="aldA"
                     /locus_tag="JNZ89_003312"
                     /pseudo
     CDS             complement(963..2403)
                     /gene="aldA"
                     /locus_tag="JNZ89_003312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310048.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
     gene            complement(2558..3400)
                     /locus_tag="JNZ89_003313"
     CDS             complement(2558..3400)
                     /locus_tag="JNZ89_003313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001027928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HAY8937085.1"
                     /translation="MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAG
                     NAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATIL
                     ADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRRTM
                     ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPR
                     LRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLV
                     CKRA"
     gene            complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="JNZ89_003314"
     CDS             complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="JNZ89_003314"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HAY8937086.1"
                     /translation="MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ
                     AIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET
                     GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF
                     SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP
                     RRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ
                     AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR
                     VFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS
                     ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
                     FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE
                     AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG
                     EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI
                     ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR
                     IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI
                     DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF
                     YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN
                     LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV
                     RRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT
                     FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE
                     QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK
                     LPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELN
                     DTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK
                     RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK
                     EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG"
     gene            7775..8380
                     /gene="azoR"
                     /locus_tag="JNZ89_003315"
     CDS             7775..8380
                     /gene="azoR"
                     /locus_tag="JNZ89_003315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HAY8937087.1"
                     /translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLA
                     ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS
                     TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF
                     LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVAA"
     gene            complement(8431..9747)
                     /locus_tag="JNZ89_003316"
     CDS             complement(8431..9747)
                     /locus_tag="JNZ89_003316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310040.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2/dual specificity phosphatase
                     family protein"
                     /protein_id="HAY8937088.1"
                     /translation="MITERRNVLLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDI
                     PSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCG
                     FLLYPLKFSFIRPEVSGVTGWPFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAER
                     WRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIK
                     IALPYVVGAGSCIVLMELMVMIQLWWPVWLCWPVLSLLIIGRGYGGLGAITTGKDSQG
                     KLPPAVYWLTLPWRIGMWLSMRWFCRRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTF
                     EFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSA
                     LVVAAWLLCYGHCKTVDEAISYIRARRSHIVLKEDHKAMLKLWENR"
     gene            complement(9737..11405)
                     /locus_tag="JNZ89_003317"
                     /pseudo
     CDS             complement(9737..11405)
                     /locus_tag="JNZ89_003317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415928.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/class I
                     SAM-dependent methyltransferase"
BASE COUNT         2841 a         3096 c         2715 g         2753 t
ORIGIN      
        1 gacgttgtcg ctattaatga tctcacttcc ccaaaaattc tcgcctacct gctgaaacat
       61 gattcaaact acggaccatt cccctggagc gttgatttta cggaagattc acttatcgtt
      121 gatgggaaaa gtatcgcggt ttacgccgaa aaagaggcta aaaatattcc gtggaaagcg
      181 aaaggtgcag aaatcattgt cgaatgtact ggcttttata cctccgccga gaaatcgcag
      241 gcgcatcttg atgctggtgc gaagaaggtg ttgatttccg cccctgccgg tgaaatgaaa
      301 actatcgttt ataacgtcaa tgacgacact ctggatggca acgacaccat tgtttccgtg
      361 gcgtcatgca ccactaactg tcttgcgccg atggccaaag ccttgcatga cagtttcggg
      421 atagaagtcg gcacgatgac gaccattcat gcctatactg gcacccagtc actggtggat
      481 ggcccacgtg gtaaagattt acgtgcttca cgcgcagcgg cagaaaatat cattccccac
      541 actacggggg cggcaaaagc cattggtctg gagatcccgg aactgagcgg caaactgaaa
      601 ggtcatgcgc aacgcgtgcc ggtgaaaaca ggttcggtca ctgaactggt atcgattctc
      661 ggaaaaaaag cgactgccga agaggtgaat aacgcactta aacaagcaac caccaataac
      721 gagtcatttg gttataccga tgaagaaata gtctcttccg atatcattgg cagccatttc
      781 ggttcggtgt ttgatgccac gcaaacggaa attaccgccg tgggcgattt acaactggtg
      841 aaaacggtcg cctggtacga taacgaatat ggcttcgtca cgcagcttat tcgcaccctc
      901 gaaaaattcg ctaaactctg acgcgcacag gcggaggaaa aaacctccgc ctcttttact
      961 cattacgact gtaaataaac cacctgggtc tgcagatatt catgcaggcc atgtttacca
     1021 tctgcgccgc caataccgga tttacgccat ccggcgtgga agccttgcat agcttcgaag
     1081 ttttcacggt tgatgtaagt ttcaccaaac ttcagccctt taatggcttt catcgcgacg
     1141 ttcagatttt gggtatagat ttgatgaggt caggccgtaa tcactgtcat tagccattga
     1201 gatagcctct tccagcgtgt caaatgcgac caccggcaga accgggccaa aggtttcctc
     1261 atgcataatc gacatttcct ggcgaacatc cagcagcaat gtcggcggat aataatatcc
     1321 tttcccctct accgctttgc cacccaacgc cactctcgcc ccttcttcta ctgcgcgcgc
     1381 cactttttgc tcaacccttt ccaacgccgc ggcgttaatc aacggcccca tcgcaatgtc
     1441 gttgcgttca gcggggttac caaattgaac cgcctgcatc gcttcaccca gccgattgac
     1501 gaactgatca taaatgcctt tctgtacata aacacgttct gcacagttac acacttgccc
     1561 actattaatg acgcgtgaat caacgatggc tttgactgcc agttcaagat cggcatcgtc
     1621 cattacgata gctggtgctt taccccccaa ttccagacac actttggtga tgtttttcgc
     1681 cgcagtcgcc atgatcttct cacctgcaga gacgctgcct gtcatactga ccattgcgac
     1741 ctttgggtta cccgccagtt cttgcccaac ggtttcacca cgccccagta caaggttaaa
     1801 cacgccgcgc ggaaggccta tttcatcgac gattttggcg aatgcaatcg cattgtttgg
     1861 cgtaaattca ctaggtttaa tgacgatggt attaccggtc aaaagagcgg gagccatttt
     1921 gcgggcaatg aggaagaacg ggaagttcca cggcagaatg ccggtagtca caccaagcgc
     1981 acgtttaaac aaaagaatat tttctcctgg acgatcgctt tgaataatct cgccctcgta
     2041 acgccgtgcc cactccgcca tgtaatcgat atagtcggca gtaaaagcca cttcgacttc
     2101 agccagctgc tggatcttgc ccccttcttc aacaatcagc gcactgattt cactggcgcg
     2161 ttcgcggatc ccggcggaga ttttgcgcaa ccaactggcg cgttcaatag caggcaacgc
     2221 ttcccattct ggttgtgcac gttctgctgc atcgattgcc ttacgggcat cctcggcctg
     2281 accatcgggt atgcgggaaa tgacagcctc tgtagcaggg tttaccacat caatccatgc
     2341 gtctccacgc caggtaacaa actgtccatc gatatacata ggatgttgaa cgggtactga
     2401 catgggcgac tcctgtgatt tatatgtttg ttcttggtaa attcattgtt aattaacatc
     2461 aatcatcata gagacggcat cgtgaaagga caattctgtg aagggcttca taaaaacaag
     2521 tgtaaaagga ataaaaggca gaaataaaag tcaggagtca tgcccgtttg caaacaagtg
     2581 gttcacaaac gggcaatttt tgacgtaacg agcgactttc catcgcctcg atgagcaccg
     2641 catcgtgttt aagcgtttgc catgcatgga tgacttctgc cggaaaatca acgtgaacga
     2701 taaaatctcg cccgcgggga ccgtagccat cgctatcatc gcgtaaacgc ggcagctcgc
     2761 cagtgagtag tgagagataa cgctcaaccg gccataatcc ttgtaactga ttaataaaga
     2821 ttacactgtc tgcgttattt cctaactgag gaacgaatcc gggataactt aaccagcgtg
     2881 gtgcatcggg attgtcccca gtcatacggc ggaacgtcgc catcgtgcgc cgctgcatgg
     2941 tggggtcctg aacaacgata gccgtatgaa ctcgttctac ggcctgatta aatagcgcga
     3001 tgctaaagcg tgcgttttca ccgcagtttg ttgactggtc ttcaatccag attttttcat
     3061 gcggaatgtg ccagaactga tgagcgatat ccgccaggat ggtcgcttct gctctgccag
     3121 tggtgcggat agtgttgtag tgcggatgct gtgcgatggc gctatacaaa aaagttgtcg
     3181 agtgaccgat accaccacta atcagtaaag gaatttgctg atcgcgagca atcttacatg
     3241 ccgcgtcgat agtcggcata accgcattgc ctgcaaggat cacgcaatcg gcctgatacg
     3301 gcacctcacc ggagaaatca tcctgcgcca gccactgtcc gataacattt atggcatcta
     3361 tagttgccgg cgaaagcgtc ggaaacgggg taatgttcat ggttcctcct tatcgttccc
     3421 ttaagaatac tgcgtgagat aatagtgaga agctgagcac tctgaaagga ggaagtcgta
     3481 tgtccttaac cgccactccg caagcctgac atatctttta aggaaatgct gtagataaac
     3541 attattcatc ttgcagcaga gaattgtatt tttctgaatt cctgaatttt tacccttacc
     3601 gttttagaat taataaaaaa cccggcgcta aatgcttacc gggttttaga tttattaggc
     3661 aaatagcagg gttaaccgct aatctgctcc atcgcctgca aaatacgctt atctgaaatc
     3721 ggataaggcg taccaagttg ttgagcgaag taactaacgc gcagctcttc tatcatccaa
     3781 cggatctctt tcacgtcttc atcctcacga cgtgcaggcg gcagtttgtt gatccattgc
     3841 tgccacgcct gctggacgtt ttcgactttc agcatctgtg cacgatcgcg atgtggatca
     3901 accgccagtt tttccagtcg tttttcaatc gcctgcaaat atcgcagcgt gtcgcccagc
     3961 cgtttgaagc cgttaccagt gacaaaaccg cgatatacca acccgcccat ctgcgcttta
     4021 atgtcagaaa gccccagtgc catggtcata tccacccgcc ctttcagacg tttgttgata
     4081 ttgaacactg ccgtaagaat ttgctcgacc tgcttcgcaa tatctaccac cgtgtcgttc
     4141 agttcggcac gcactttctc atgcagcgca gcaaagcctt cttccgtcca gaccgggcca
     4201 ccattggcgt cgatcagttg atccacaccg caggagatac agtcgtcgat cagctccagc
     4261 actttgccat acgggttgaa gtacagtccc agcttggctt tgttcggtaa cttttcatgt
     4321 aaatacttga tcggcgaggg aatatttagc agcagtagac ggcgaagacc attccacatt
     4381 gcctgttttt gctccagcgg gttatcaaac agtttgatcg ccacgctgtc gcgttcatcc
     4441 accagcgccg gccacgcctt cactttatag ttgccacgct tctgttcgta actttccggc
     4501 agctgaccaa aactccagat atgtaagccg ctctgctcga taccgtcatc cgccaccgcg
     4561 gacagcgttt cctgcacttt gcctttcagc gcatctttca gatcttgtag cgagcgccct
     4621 tcttttagct tcttgttttt gtcatccacc acgcggaagg tgattttcag gtgatcgggc
     4681 acctgatccc agtgccagtc ttcgcggtca acggtaacgc cggtcatccg ccgtaactcg
     4741 cgctcaaggc tgtcgagcaa cggtaactcc agcggtgtga cgcggcctaa aaacgcttcg
     4801 gcgtagtttg gtgcaggcac aaaattacgg cgtaccggtt tcggcaacga tttaatcaga
     4861 gcaatcacca attcgcggcg cagaccgggg atctgccatt caaacccgct ttcctcaacc
     4921 tggttaagta acggcagcgg aatatgtacg gtcacaccgt ccgcgtctgc gcctggctca
     4981 aactgatagc tcaaacgcag cttgagattg ccctgatgcc agaagttcgg gtaatccagc
     5041 ttgctgattt tttccgcccc ttctttgatc aacatgctct tttcaaagtt gagcaaatca
     5101 ggcgtttcgc ggctgacttt tttccaccag ctatcgaagt gacgagcgga gattacatcg
     5161 tggctgatgc gctggtcgta gaactcaaac agcgtttcgt catcaaccag aatatcgcgg
     5221 cgacgtgatt tgtgttccag ctcttccact tcggcccgca gtttcaggtt ttcacggaag
     5281 aatgcgtgac gcgtctgcca gtcaccttcc accagcgcat ggcgaataaa gagttcacga
     5341 cataacgccg gatcgatctg gctgtagttg accttgcgcg cggcaacaat cggcaaacca
     5401 taaacagtga ctttttccgt tgccatcacc gcgccctgcg cccgttccca gtgcggttcg
     5461 ctgtaggtac gtttaatcaa atgctgagcg acaggctcca cccattccgg gtcgatacgc
     5521 gcagcaatgc gcccccacag gcggctggtt tctaccagtt ccgccaccat tacccatttc
     5581 ggcggttttt tgaataaacc agaaccgggg aagatggaga aacgcgcgtt acgtgcgccg
     5641 gtatattctt gtttatcggc atctttcatg ccgatatggg aaagtaaacc cgtcagcaac
     5701 gcaatgtgaa tttcgcgata ctccgccggt tcgctgttaa ccggaatgcc aagttctttc
     5761 accacctgac gcaactgggt gtagatatcc tgccattcgc gcacgcgcag atagttgaga
     5821 taatcggtac gacacaggcg acggaaggcg tttgaagaaa gcgccttttg ctgctcgcca
     5881 agataattcc acagatttac aaacgcgagg aagtcggatt ctttgtcgtg gaagcgacga
     5941 tgtttttcgt ccgatgcctg ctgtttgtcc atcggccgct cacgcgggtc ctgaatggag
     6001 agcgcggacg tgataatcat cgcctcacgc acgcagccat gtttctgcgc ttccagcacc
     6061 atacgcgcca gacgaggatc gaccggcagt tgcgagagct ggcgaccgag cggcgtcagt
     6121 ttataggcgc tggcctgttc atccgtggtg atcgcgccca gttcttcgag cagacgcacg
     6181 ccatcctgga tattgcgttt atccggtgct tcgacaaacg ggaacgcagc gatatcgccc
     6241 agccccagcg cggtcatctg caaaataacc gaggccaggt tggtacgcag aatctccgga
     6301 tcggtaaact ccgggcgcga gaggaaatcg tcttcggaat agagacgaat acagatccct
     6361 tcggacacac gaccacaacg gcctttacgc tgattggcag acgcctgtga aatgggttca
     6421 atcggcaaac gctgcacttt ggtgcgatag ctgtagcggc tgatacgcgc cgtaccgggg
     6481 tcgataacgt atttaatccc cggtacagtc agcgaggttt ccgcgacgtt ggtcgccagc
     6541 acaatgcgtc gcccgctgtg cgactggaac acgcggttct gttcgctatt cgaaagccgc
     6601 gcataaagcg gcaagatttc ggtatggcgt aagttcagct tgttcagcgc atcggcggta
     6661 tcgcgaattt cccgctcgcc gctcataaag atcagaatgt cgccagggct ttcctggctc
     6721 agttcgtcta cggcgtcaaa aatcgcctgc aactgatcgc gctcggtgtc atcggcttct
     6781 tcaacaatcg ggcgatagcg cacttccacc ggataggtcc gaccggagac ttcgataatc
     6841 ggcgcattat taaagtggcg agaaaagcgt tccgggtcga tagtcgcgga agtgataatg
     6901 atttttaggt caggacgccg cggcagcaac tctttcaaat agccgagcag aaaatcgata
     6961 ttcaggctgc gttcgtgtgc ttcgtcaata atgatggtgt cgtactgcat cagcaggcgg
     7021 tcttgctgga tctccgccag caggataccg tcggtcatca gcttgaccat cgtgttatca
     7081 cttacgtgat cgctgaaacg cactttgtaa ccgatgcaac cgcctggctc cgttttcagc
     7141 tcttccgcaa tacggttcgc caccgttctt gccgccagac gacgcggctg ggtatggccg
     7201 atcagtcctt taatcccgcg ccccagctcc atacagattt tcggtagctg ggtcgtttta
     7261 ccggaaccgg tttccccggc gacgatcacc acctggtgat cacgaatcgc ttcgagaata
     7321 tcctgttttt tctgactaac tggcaaattg tccggataag tgatttccgg tcgtgccgct
     7381 tcacgcagca ggactttccc tgccgcctgg tcaatctctt tcgccatctc ctggaaaatg
     7441 gcctgttgtg catcaggatt tttaaccttc ttaacaccat gcagacggcg agaaaaacgc
     7501 agtctgtcgc gcagcatcaa cgaatccagc cgctgctgca aagcagtaaa ggtcaatttt
     7561 tgttgttctg tcataacgtt agtgggcagt agtctgcctg attaattttc ttttaaatga
     7621 tagatataga gtaccacatc gcggctttct atgcgttgtt caataaattc gaacataggc
     7681 ttcgatttat tgcgctatct ctgtggcagg attgtgaata aagtgtcagc aagcaacggg
     7741 gcatcgccaa ttcaaacatc tataaggaaa caccatgagc aaggtattag ttcttaaatc
     7801 cagcatcctg gcagggtact ctcagtctaa tcagttgtcc gattattttg ttgaacaatg
     7861 gcgcgaaaag cactccgctg atgaaatcac cgttcgcgac ctggctgcaa atccgattcc
     7921 ggtactggat ggcgaactgg ttggcgctct gcgtccgagc gatgcgccgc tgactccgcg
     7981 tcagcaggaa gctctggcgc tttccgatga gctgattgcc gagctgaaag cccacgacgt
     8041 tatcgttatt gcggcaccga tgtataactt caacatctca actcagttga aaaactattt
     8101 tgacctggtt gcacgcgcag gcgttacttt ccgctatacc gagaacggtc cggaaggtct
     8161 ggtaacgggt aaaaaagcca tcgttattac cagccgcggt gggatccaca aagatggacc
     8221 aacggacctg gtgacgccgt atctgtccac gttcctcggc tttatcggca ttaccgatgt
     8281 gaaatttgtc ttcgccgaag ggatcgcata cggtccggaa atggcagcga aagcgcagtc
     8341 tgacgcgaaa gcggccatcg acagcattgt tgctgcataa ccggacacga tcttgatgtg
     8401 gactgtagtt cagtccacat ctcaatccac ttacctgttt tcccataatt tcagcatcgc
     8461 tttgtgatct tccttaagca caatatgcga acgtctggct cgaatataac taatcgcttc
     8521 atcaacggtt ttacagtgtc cgtaacataa caaccatgcc gccactacca gcgcactgcg
     8581 cgataatccc aacgcgcaat ggaccagaac gctgccttgc tcttcgcgta atgtttccag
     8641 catcgccacg gcctgtcgga gctccccctc ttccggaacc accagatcca gcatcggtac
     8701 acagaaatag agtcgatctt ttgtcgctcg tccccgaggg aattcaaagg tgacgtccag
     8761 aaccgcattc tgtgccggaa tatgtcgtgg aaacgcccct aaataaacac cagcagtaat
     8821 tttgctcacc ggctccaggc gacgacaaaa ccaacgcata gacagccaca tcccgatgcg
     8881 ccagggcaat gtcagccagt aaacggcggg cgggagtttc ccctgactat ctttccctgt
     8941 tgttatcgcg ccaagcccac cgtacccacg gccaataatg agtagcgata atactggcca
     9001 acataaccag actggccacc ataactgaat catcaccatt agctccatca acacaatgca
     9061 cgagcccgcg cctacgacat atggcagtgc tattttgatt cgacgttgat caggtttctg
     9121 ataattccaa cgacgatcga cgggcaccat ccagtcaatc aacataccta ccgccagccc
     9181 tgtgatgaca tcaataaaat gatgctgcca ggtcgtcaga gtagaaatag cgatgagtaa
     9241 aaaccatccg ccacagactt tacgccacct ctcagccaga tgctgacgaa agtgacgcca
     9301 aagtagccag cagagaataa tatgcagcga aggagactgg ttataaggca gatcaaacag
     9361 ttcaagttgc gaaaatggcc atcccgtcac cccactcact tcaggacgga taaaactaaa
     9421 cttcagcgga tagagcaaaa aaccgcagca ggccattacc gttgccagaa taagccggtg
     9481 gacaagtcgg cgctgttcga atgtcgtgct acaaacgaac agcgaaaatc catataaaag
     9541 atccagactc cagtaaggaa caatagtcca gggaagaaaa gggatcgccg tttcccaacc
     9601 gaatacctga ctggggatat catggctgtt aaggtcctga accgcggtga actgattaag
     9661 agatccatag gtgaagaaaa aaaacggggc cagcaacaat aaccagccag cgccttgtag
     9721 caatacgttc cgacgttcag ttatcacgac gcaccgccat cgaaaccgta aaaatacccc
     9781 actcatcaat ccgttgtgtg catttatcaa atccggcatc acgcacgagt gaatccatct
     9841 ccccttgcga acgcacgcgc attacccacg gtttaccatc tttatgactg gttaacaccc
     9901 cggcaatcat ctccagttga gggtgccacg gctgcccggt gtagatgaga atgccgaccg
     9961 gttcgatggc attggcaaga cctgcgagtg agttttttac ctgctcattt tcgggaaaaa
    10021 gctcatacag tccagagaca attgccagcg taggccgcgg agttaacgcg ctgagttcct
    10081 ccgggttaaa cgcatcgccc tgttcaaaac gcacccgccc agacattccc cgttgggcaa
    10141 tcatctcttg cccctgtgca acatttaact cgctgtaatc acgtaacaaa atatcgctta
    10201 cggcaggctc gtttgccagc gcatccagta catagcgccc atgccctgcg gcaatgtcaa
    10261 ccacgcggac ggctaaacct ttggcgtgga gatcggcaac ggcttgttta atcagtattt
    10321 gtaaatgggt tttgcgctgg cgaataccgc gccagccaac actgttcagg tagattttgt
    10381 cgattaagcg cccgaatgcg ttactacctt gcggttgatt ttgatagaca taatccagcg
    10441 aactgcctga atcaaagccg gtgctcattc cgagatgcag gcccgcagag tgcgtcccga
    10501 acaatttcat cgcctttcgc ataaagcgat acgctaaatc aaccggcgat aatagcacgg
    10561 gtccaccaga aagtagccgc cattgatccg ctgatggtcc tgtgcagtct tcatgctgat
    10621 aatcaaattt ttgcgatttg ttagcatata aacgactaat aaagctttgc attttttcaa
    10681 atgccagcgc cctgttctct tcacccaacg tgtcgtgata aaagcctggc agcagatgca
    10741 gctctttcag agggctacgt aatctctgat aaaaatcaat ctgcggttgg cgatgcacca
    10801 catagtcatc gcctgatatc agaagttgcg tggggagcgt aatcgccgcc gcatctctaa
    10861 taatacgttc agacgtttta tagagatcga gcaagatatt gacggcaatc gcccgtgtga
    10921 tcagcggatc attattgaaa ctcgccaccc gttgccgatc gtgggtcaaa tagcgtcctt
    10981 tcacatagga attaataaaa aacagaccac gcagacgatg ccataacgcc agcgcaggac
    11041 gtgccagcgg cacatacaat ttaaccttaa aggccggaga agccagcacc agcccgcgaa
    11101 ttgcaggcgc ataatcatga acctatgtgg caaccagcac tgcgccgacg ctttgcgcga
    11161 tcacaaccac ctcttccagt ccaacctagc tgtcgctggc agcaaaacgg acaaattcat
    11221 cgacatcctg cactgaacgc gcaagagatg ggctataacc acgcggcccc gaagtttttc
    11281 catgcccccg agcatcccat gcataaaaag cagtatctgg catcgccagt tcatcaacga
    11341 tatgttgtag acgaccagaa tgttcatggc cacgatgaaa taagacaatg acctttttcg
    11401 cccct
//
LOCUS       DADMIB010000137        11296 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.137, whole genome shotgun sequence.
ACCESSION   DADMIB010000137 DADMIB010000000
VERSION     DADMIB010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11296
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.137"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            289..1266
                     /gene="csiD"
                     /locus_tag="JNZ89_003318"
     CDS             289..1266
                     /gene="csiD"
                     /locus_tag="JNZ89_003318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation induced protein CsiD"
                     /protein_id="HAY8937089.1"
                     /translation="MNALIAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQ
                     FLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKPLLNRAEGALLINAVGI
                     DDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
                     NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPP
                     SKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP
                     VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ"
     gene            1286..2554
                     /gene="lhgO"
                     /locus_tag="JNZ89_003319"
     CDS             1286..2554
                     /gene="lhgO"
                     /locus_tag="JNZ89_003319"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417146.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HAY8937090.1"
                     /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTG
                     HNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNDIRYDNCGKMLIATSDLEMERM
                     RALWERTAANGIEREWLNAEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQA
                     RGGEIIYNAEVSALSEHKNGVVVRTRQGGEYEASTLISCSGLMANRLVKMLGLEPGFI
                     ICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKR
                     EGYRKRDFSFNDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLS
                     LSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSK
                     VQTLLASQSNPGRTLRATRSVDALHAAFNQ"
     gene            2577..4012
                     /gene="gabD"
                     /locus_tag="JNZ89_003320"
                     /pseudo
     CDS             2577..4012
                     /gene="gabD"
                     /locus_tag="JNZ89_003320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311549.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent succinate-semialdehyde
                     dehydrogenase"
     gene            4026..5292
                     /gene="gabT"
                     /locus_tag="JNZ89_003321"
                     /pseudo
     CDS             4026..5292
                     /gene="gabT"
                     /locus_tag="JNZ89_003321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417148.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
     gene            5530..6891
                     /gene="gabP"
                     /locus_tag="JNZ89_003322"
     CDS             5530..6891
                     /gene="gabP"
                     /locus_tag="JNZ89_003322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005114089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GABA permease"
                     /protein_id="HAY8937091.1"
                     /translation="MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
                     PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFW
                     VLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
                     IAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAE
                     IVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSV
                     LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP
                     YVAVLLSTGAAFLTVVVNYYVPVKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE
                     GSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTDLLAIGIICTVPIMAA
                     GIS"
     gene            6950..7612
                     /gene="csiR"
                     /locus_tag="JNZ89_003323"
     CDS             6950..7612
                     /gene="csiR"
                     /locus_tag="JNZ89_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CsiR"
                     /protein_id="HAY8937092.1"
                     /translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR
                     EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGSDEWEA
                     DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
                     YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMA
                     GN"
     gene            complement(7613..8062)
                     /gene="kbp"
                     /locus_tag="JNZ89_003324"
     CDS             complement(7613..8062)
                     /gene="kbp"
                     /locus_tag="JNZ89_003324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium binding protein Kbp"
                     /protein_id="HAY8937093.1"
                     /translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDAD
                     KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
                     SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
     gene            complement(8146..8304)
                     /locus_tag="JNZ89_003325"
     CDS             complement(8146..8304)
                     /locus_tag="JNZ89_003325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HAY8937094.1"
                     /translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH
                     AFWVQTRD"
     gene            8487..8786
                     /locus_tag="JNZ89_003326"
     CDS             8487..8786
                     /locus_tag="JNZ89_003326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8937095.1"
                     /translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
                     TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
     gene            8796..9320
                     /gene="ygaP"
                     /locus_tag="JNZ89_003327"
     CDS             8796..9320
                     /gene="ygaP"
                     /locus_tag="JNZ89_003327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YgaP"
                     /protein_id="HAY8937096.1"
                     /translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
                     VLEQSGLPPKLRREQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDRIDGWKRAGLP
                     VAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
                     MARLLDKMPWNQRA"
     gene            complement(9367..9771)
                     /gene="stpA"
                     /locus_tag="JNZ89_003328"
     CDS             complement(9367..9771)
                     /gene="stpA"
                     /locus_tag="JNZ89_003328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein StpA"
                     /protein_id="HAY8937097.1"
                     /translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
                     EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
                     NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
     gene            10439..10888
                     /gene="alaE"
                     /locus_tag="JNZ89_003329"
     CDS             10439..10888
                     /gene="alaE"
                     /locus_tag="JNZ89_003329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HAY8937098.1"
                     /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
                     RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
                     VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
     gene            complement(10925..11269)
                     /locus_tag="JNZ89_003330"
     CDS             complement(10925..11269)
                     /locus_tag="JNZ89_003330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaC family protein"
                     /protein_id="HAY8937099.1"
                     /translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
                     GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL
                     ERYLNGLFGEAS"
BASE COUNT         2664 a         2858 c         2981 g         2793 t
ORIGIN      
        1 gtttactaac ggtcattttg cagtgaagcc atttactgtt ttttatcgac cagataatct
       61 gttctctaat gttaactccc cctaacctgt tgctttagtt attcatttcc tgtctcactt
      121 tgccttaata ccctacgtta aatgttacta atttgttgtt tttgatcaca ataagaaaac
      181 aatatgtcgc ttttgtgcgc atttttcaga aatgtagata tttttagatt atggctacga
      241 aatgagcatc gccatgtcac cctacatctc ataagaggat cgcttctgat gaatgcactg
      301 atcgccgtac aaaataacgc tgtcgattca ggccaggact atagcggatt cactctcatc
      361 ccgtcggcgc aatccccgcg tctgctggaa ctcaccttca ccgaacagac gaccaaacag
      421 tttctcgaac aggttgccga atggcccgtg caggcgctgg agtacaaatc gtttctgcgt
      481 tttcgggtag gcaaaattct tgacgatctg tgtgcgaatc agctgcaacc attgctgttg
      541 aagcccctgc taaaccgtgc tgaaggtgcg ctgttgatca atgcggtggg tatcgatgat
      601 gtggcgcagg cagatgagat ggtgaagctg gcaacggcgg tagcgcatct gattggtcgc
      661 tcaaatttcg atgcgatgag cggtcagtat tacgcgcgtt tcgtggtgaa aaatgtcgat
      721 aactcagaca gctatctgcg tcagccgcac cgcgtgatgg aactgcacaa cgacggcacg
      781 tatgtcgaag agatcaccga ttacgtgctg atgatgaaaa tcgatgagca aaacatgcag
      841 ggtggaaatt cgttgctgct gcatctcgat gactgggaac atctggacca ctatttccgc
      901 catccactgg cgcgtcgccc gatgcgcttt gccgcgccgc cgagcaaaaa cgtcagcaaa
      961 gatgttttcc atccagtgtt cgacgttgat caacagggtc gcccggtgat gcgctatatc
     1021 gaccagttcg tccagccaaa agattttgaa gaaggcgtgt ggttgagcga gctttccgat
     1081 gccattgaaa ccagcaaagg cattctttct gtacccgttc ccgttggcaa attcctgttg
     1141 ataaacaacc tgttctggct gcacggtcgc gaccgcttta ctccgcaccc ggatctgcgc
     1201 cgtgaactga tgcgtcagcg tggctatttc gcttacgcca ctcaccacta ccagacgcat
     1261 cagtaagcgc aaaggaattg agcggatgta tgattttgtg attattggcg gcggcatcat
     1321 cggcatgtcg accgccatgc aactgattga tgtttatccg gatgcccgca ttgcgttgct
     1381 ggaaaaagag tccggcccgg cctgtcacca gacgggccac aacagcggcg tgatccatgc
     1441 cggggtctat tacacgcccg gcagcctgaa ggcgcagttt tgcctggcgg gaaaccgcgc
     1501 caccaaagcc ttttgcgatc aaaacgacat tcgctatgac aactgcggca agatgctgat
     1561 cgccacgtcc gatctcgaaa tggaacggat gcgcgcgttg tgggaacgca cggcggcgaa
     1621 cggtatcgag cgcgagtggt taaacgccga ggaactgcgc gagcgcgaac cgaatatcac
     1681 cgggctcggc ggcatttttg tgccgtccag cggcattgtc agctatcgcg aagtcacagc
     1741 ggcaatggca aaaatcttcc aggccagagg cggtgagatt atttataacg ccgaagtcag
     1801 cgccctcagt gagcataaaa acggcgtggt cgtccgaacc cgtcagggcg gcgaatatga
     1861 agcatcgacg ctgattagct gttccgggct gatggctaac cggctggtga aaatgctcgg
     1921 cctcgaaccg ggttttatta tctgcccgtt ccgtggcgag tatttccgcc ttgcgccgga
     1981 gcataaccag attgttaacc atctgattta ccccatccct gacccggcaa tgccgttttt
     2041 gggcgtgcat ctcacccgca tgatcgacgg cagcgtgacc gtcgggccaa acgcggtgct
     2101 ggcttttaaa cgcgaaggct atcgcaagcg cgacttctca tttaacgaca cgctggaaat
     2161 tttaggctcg tcggggattc gccgggtgct gcaaaaccat ctacgctcag gactgggcga
     2221 gatgaaaaac tcgctgtgca aaagcggcta tctgcggctg gtgcaaaagt attgtccccg
     2281 gctttcgtta agcgatctcc agccctggcc cgccggtgtg cgggcgcagg cggtatcgcc
     2341 ggacggcaag ctgattgacg attttctgtt tgtcaccacc ccgcgcacga tccacacctg
     2401 caatgcgccc tccccggcag cgacatcagc aattcctatt ggtgcgcata ttgtcagcaa
     2461 ggtacaaacg ctgttggcaa gccagagtaa ccccggacgc acgctgcgag cgacacgtag
     2521 tgtggatgcc ttacacgccg catttaatca ataacctttg aaaacaggac gtaacaatga
     2581 aacttaacga cagtaactta ttccgccagc aggcgttgat taacggggaa tggctggacg
     2641 ccaacaatgg cgggatcatc gacgtcacca atccggcgaa cggcgacaag ctgggtagcg
     2701 tgccgaaaat gggcgctgat gaaacccgcg ccgctatcga cgccgccaac cgcgccctgc
     2761 ccgccaggcg tgcgctcacc gccaaagaac gcgccaacat tctgcgcaac tggttcaatt
     2821 tgatgatgga gcatcaggac gatttagcgc gcctgatgac cctcgaacag ggcaaaccac
     2881 tggccgaagc gaaaggcgaa atcagctacg ctgcctcttt tattgagtgg tttgccgaag
     2941 aaggcaaacg tatttatggc gataccattc ccggtcatca ggccgataag cgcctgattg
     3001 ttatcaagca gccgattggc gttaccgcag ctatcacgcc gtggaacttc ccggcggcga
     3061 tgattacccg taaagccggt ccggcgctgg cggcaggctg caccatggtg ctgaagcccg
     3121 ccagtcagac accgttctct gcgctggcgc tggcggagct ggcgattcgc gcgggcattg
     3181 cggctggcgt gtttaacgtg gtcaccggtt cggcaggcgc ggtcggtaat gaactgacca
     3241 gcaacccgct ggtacgcaaa ctgtcgttta ccggttcgac cgaaattggc cgacagttaa
     3301 tggaacagtg cgcgaaagac atcaaaaaag tgtcgctgga gctgggcggc aacgcgccgt
     3361 ttatcgtctt tgacgatgcc gatctcgata aagccgtgga aggcgcgctg gcctcgaaat
     3421 tccgcaacgc cgggcaaacc tgcgtctgcg ccaaccgttt ggcgtgtatg accgctttgc
     3481 cgaaaaattg cagcaggcgg tgagcaaact gcacatcggc gacgggctgg ataaaggcgt
     3541 caccatcggg ccgctgatcg atgaaaaagc ggtagcaaaa gtggaagagc atattgccga
     3601 tgcgctggag aaaggtgcgc gtgtggtttg cggcgctaaa gcggatgaac gcggcggcaa
     3661 cttcttccag ccgaccattc tggtggacgt gccggccaac gccaaagtgt cgaaagaaga
     3721 gacgttcggc cccctcgccc cgctgttccg ctttaaagat gaagccgatg tgattgcgca
     3781 agccaatgac accgagtttg gccttgccgc ctatttctac gcccgtgatt taagccgcgt
     3841 cttccgcgtg ggcgaagcgc tggagtacgg catcgtcggc atcaataccg gcattatttc
     3901 caatgaagtg gccccgttcg gcggcatcaa agcctcgggt ctgggtcgtg aaggttcgaa
     3961 gtatggcatc gaagattact tagaaatcaa atatatgtgc atcggtcttt aactggagaa
     4021 tgcgaatgaa cagcaataaa gagttaatgc agcgccgcag tcaggcgatt ccccgtggcg
     4081 ttgggcaaat tcacccgatt ttcgctgacc gcgcggaaaa ctgccgggtg tgggacgttg
     4141 aaggccgtga gtatcttgat ttcgcgggcg ggattgcggt gctcaatacc gggcacctgc
     4201 atccgaaggt ggtggccgcg gtggaagcgc agttgaaaaa actgtcgcac acctgcttcc
     4261 aagtgctggc ttacgagccg tatctggagc tgtgcgagat tatgaatcag aaggtgccgg
     4321 gcgatttcgc caagaaaacg ctgctggtta cgaccggttc cgaagcggtg gaaaacgcgg
     4381 taaaaatcgc ccgcgccgcc accaaacgta gcggcaccat cgcttttagc ggcgcgtatc
     4441 acgggcgcac gcattacacg ctggcgctga ccggcaaggt gaatccgtac tctgcgggca
     4501 tggggctgat gccgggtcat gtttatcgcg cgctttatcc ttgcccgctg cacggcataa
     4561 gcgaggatga cgctatcgcc agcatccacc ggatcttcaa aaatgatgcc gcgccggaag
     4621 atatcgccgc catcgtgatt gagccggttc agggcgaagg cggtttctac gccgcgtcgc
     4681 cagcctttat gcagcgttta cgcgctctgt gtgacgagca cgggatcatg ctgattgccg
     4741 atgaagtgca gagcggcgcg gggcgtaccg gcacgctgtt tgcggtggag cagatgggcg
     4801 tggcgccgga tcttaccacc tttgcgaaat cgatcgctgg cgggcgtcac cgggcgcgcg
     4861 gaagtgatgg acgctgttgc accgggcggt ctgggcggca cctatgccgg taacccgatt
     4921 gcctgcgtgg ctgcgctgga agtgttgaag gtgttcgagc aggaaaatct gctgcaaaaa
     4981 gccaacgatc tggggcagaa gctaaaagac ggattgttgg cgatagccga aaaacacccg
     5041 gagatcggcg acgtacgcgg gctgggagcg atgattgcca tcgagctgtt tgaagatggc
     5101 gatcacagca aaccggacgc aaaactcacc gccgggatcg tggcacgcgc ccgcgataag
     5161 ggcctgattc ttctctcctg cggcccgtat tacaacgtgc tgcgcatcct tgtactgctc
     5221 accattgaag acgctcagat ccgtcagggt ctggagatta tcggtcagtg ttttgatgag
     5281 gcgaagcagt agcaccgtcc ccatgcagga ggcgacgctg cgcgtcttgt ccggcctacg
     5341 agaatccagg tcggataagg cgtttacgcc gcatccgaca atctgtacgt gaacaggaat
     5401 aaatctatgt cggccggata atgcggagcc gctctccggc aaaaagaatc aataacaatt
     5461 aaacgcgtga cccggcgcgg gaaatgtcgg ggcgctctcc caagtgacac actttcgaga
     5521 ggattcagga tggggcaatc atcgcaacca catgagttag gcggcgggct gaaatcacgc
     5581 cacgtcacca tgttgtctat tgccggtgtt atcggcgcaa gtctgtttgt cggttccagc
     5641 gtcgccatcg ccgaagcggg cccggcagta ttactggcct atctgttcgc cgggctactg
     5701 gtggttatga ttatgcggat gttggcggaa atggcggttg ccacgcccga taccggttcg
     5761 ttttccacct atgccgataa agccattggt cgctgggcgg gctataccat cggctggttg
     5821 tactggtggt tttgggtact ggttatcccg ctggaagcca acatcgccgc catgatcctg
     5881 cactcgtggg ttccaggcat tcccatctgg ttattttccc tcgtcattac ccttgcctta
     5941 actggcagta atttattaag cgttaaaaac tacggcgaat ttgagttctg gctggcgctg
     6001 tgcaaagtca tcgctatcct ggcctttatt ttccttggtg cagtcgcaat tagcggtttt
     6061 tacccttatg ccgaagtgag cgggatctca agattgtggg atagcggcgg ctttatgccc
     6121 aacggcttcg gtgcggtatt aagcgcgatg ttgatcacca tgttctcgtt tatgggcgca
     6181 gaaattgtca ccattgccgc cgcggaatcc gacacgccgg aaaaacatat tgtccgcgcc
     6241 actaactcgg ttatctggcg tatttctatc ttctatttgt gctctatttt tgtcgtcgtg
     6301 gcattaattc cgtggaatat gcccggacta aaagccgtcg gttcttatcg ctcggtactg
     6361 gaattgctca atattcccca tgcgaaatta atcatggact gtgtgatatt actttccgta
     6421 accagctgcc tgaactcggc gctgtatacc gcttccagga tgctctactc cttaagccgt
     6481 cgcggagatg cgcctgcggt aatgggtaaa atcaaccgca gtaaaacccc gtacgtggcg
     6541 gtgttactct ccaccggcgc ggcattctta acggtggtgg tgaactatta cgtgcctgtg
     6601 aaggtattta aatttctgat cgacagctcc ggcgctatcg ccctgctggt ttatttagtc
     6661 atcgccgttt cacagttgcg gatgcgcaaa attctgcgag cagaaggaag cgaaattcgc
     6721 ttgcgcatgt ggctttatcc ctggctcacc tggctggtca tcggctttat tacctttgtg
     6781 ttggtagtga tgctattccg cccggcgcaa cagttagaag tgatctccac cgacttatta
     6841 gcaataggga ttatctgtac cgtgccaatt atggcggctg gaataagctg ataatgtggc
     6901 aaaaaacacc cgttcataat acgcgctgat aataatcagg agtcacacca tgaccattac
     6961 gtctctggat ggctatcgct ggctgaagaa cgatattatt cgcggtaatt ttcaaccgga
     7021 tgaaaaatta cggatgagtt tgctgacatc gcgttatgca cttggcgttg ggccgttgcg
     7081 ggaagcactt tctcaactgg tggcggaacg gctggtcacg gtggtgaatc aaaaagggta
     7141 tcgggtggcg tctatgtcag agcaggagct gctcgatatt ttcgatgccc gcgccaatat
     7201 ggaagcgatg ttagtgagtc tggcgattgc ccgcggtagc gatgagtggg aggcagacgt
     7261 tctcgcaaaa gcgcatctgc tcagtaagct ggaagcctgt gacgccagcg agaaaatgct
     7321 tgatgagtgg gatctgcgtc atcaggcgtt tcatacagca attgtggcgg gctgtggttc
     7381 tcactatttg ctgcaaatgc gtgaacggtt gtttgatctg gcggcgcgct atcgatttat
     7441 ctggctgcgg cgaacggtgc tttcggtaga aatgctggag gataaacacg atcagcacca
     7501 gaccctgact gcggcggtac tggcgcgaga taccgcgcgc gccagtgagt taatgcgcca
     7561 gcatttactg acgccaattc ccattatcca gcaggcgatg gctggcaatt aactactctt
     7621 ccggaatacg caacacttgc cccggataaa ttttatccgg gctttttagc atcggtttat
     7681 tcgcttcgaa gattttattg tacagattag cgttaccgta gacctgtttg gaaatggcac
     7741 tcagagtgtc gccagactta acggtataaa actggctggc agtggctggt gtcgccgttt
     7801 tcacctgatc atcaacactg gcaataccgg aaatattccc caccgcaaca aggattttct
     7861 ccttcgcctc ctgactcagg ccgtcaccag tgaccgtcgc tttgccgtcg gcaatttgaa
     7921 tgttcacttt atcggcatca ggtataccgg ttttgctcag atgctcctgc accttcttcg
     7981 cctgatcgtc tttatcgtgc tgacctgtaa ccgcgtccca gagtttttct ccggcatctt
     8041 tcacaaaatt gaacagaccc atagctacct cattcgttaa cggaaacact cagaaagtgt
     8101 agcagaggaa cgcggcgcgt taacgccgcg ggggggagca caggtttaat cgcgggtttg
     8161 cacccagaac gcgtgaatca aaccggggat atacccaagc agtgtcagca gaatattaat
     8221 aatgaacgcc caaccgaacc ctttaccgag cagcacgccg agcggcggca gaatgatggt
     8281 gatgacgatt ctccagaaac ccatatgtac tccctataag aaaattactc attgtttaaa
     8341 aagagatttt atctcttaag cgtagtaatt ttagcggagc ctgccagttt cagcttacgc
     8401 ttttactctc atttacgctg ctgaggctgg tatatgttgc atttttagtt tagagtttac
     8461 ttaatttaga aaatacttaa ataaatatga ctgaactcgc gcaattacag gccagtgccg
     8521 aacaggcagc ggccttattg aaagcaatga gccatcctaa acgattgctg attctgtgca
     8581 tgcttagcgg ttcccccggc accagcgcgg gagagctgac gcgcattacc ggactgagtg
     8641 cctctgcgac atcacagcat ctcgctcgta tgcgggacga agggcttatc gacagccaac
     8701 gggatgccca acgcattcta tattccatta aaaatgaggc ggtaaatgcc attatcgcca
     8761 ccctgaaaaa tgtctattgt ccgtaaggag tcactatggc tttgacaacc atttcgccgc
     8821 atgatgcaca agaattaatc gcacgcggcg caaagttaat cgatattcgt gacgctgatg
     8881 aatatcttcg tgaacatatt cctgaagcag atctggctcc attatccgtg ctggaacagt
     8941 caggtcttcc acctaaatta cgtcgcgagc aaattatatt ccactgccag gcaggtaaac
     9001 gcaccagtaa taacgccgat aaattagcag cgattgccgc ccccgcagaa atatttttac
     9061 tcgaagatag gattgatggc tggaaaagag ctggattgcc agtagcggta aataaatctc
     9121 aacccttgcc gttaatgcgc caggtgcaga tcgctgcggg tggtttaata ttaatcggcg
     9181 ttgtactggg ttataccgta aatagcggtt tcttcttatt aagtggcttt gttggtgccg
     9241 ggttactgtt tgcaggaatc agcggttttt gtggaatggc aaggttgtta gataagatgc
     9301 cgtggaacca acgagcttga gaagcgacgc cggacgcgcc ctagcagcga catccggcct
     9361 cagtaattag atcaggaaat cgtcgagaga tttaccttct gccagcgcct gagcaattgg
     9421 cttcggtgta cggccctgac cggtccaggt cttagtttca ccgttaacat cagtgaattt
     9481 atatttcgcc ggacgcggct ggcgtttttt accagcacgt ggtgcagcag cagagctatt
     9541 acccaataac tcttccgggt taattccgtc agctttcatc agctccagcc aggtgctaat
     9601 tttttcctga cgctcagcca gttcacgctg ctgctgttct tcttcttcac gtctttcttt
     9661 agtgacaacc ctgaattttt cgagcatttc ttcaagaacg tcaatggaga attcgcgagc
     9721 catcgcacgg agggttcgaa tgttatttaa actttgtaac attacggaca taataaagaa
     9781 aaccttttaa cgccaaaaca aaaaagtatt tcgtcgcgta gtgtaagcga tcacttatta
     9841 tatttccaca aaatttaatc tatttacagt cctgcgcgag attatttcag ctgttatttt
     9901 ctgaaactct cagaataatt tcaagattat atattagcca ttttgatgag taatttaggt
     9961 tattggtgaa cagagtggcg ctctctgctc gctaactccg caagcctgat aaaaccgaag
    10021 tgaataaaaa tgcaatataa cagaataaaa gaaaacaccc ctcactggtg ctttctgctg
    10081 ttaatgtaca ttttctggca tcaaaaatgc tgtaaatgac ccggtcacga caaacaccga
    10141 attctctacg cttatagcgt tacctcaccc ccaaactttc attagtgaaa ttaaaggcaa
    10201 ggtcatatcc aattgattta attgaaaata aatcatatcg gcatgtaaaa atccacaatg
    10261 tacaaaaaac gagctgttac ggaatatttt atctacaaaa aactgactaa ataaaagttt
    10321 ttcactaatt gattagtcat agccagcgat atacgctatg cgaaaatgca gatggcaatg
    10381 agatccactg ctttcatctc cattaacatc ccattacgct ttattaagga gcattagcat
    10441 gttctcaccg cagtcacgct tgcgtcatgc agttgcagat acgttcgcga tggttgttta
    10501 ctgttctgtc gtgaacatgt gtattgaagt tttcctctcc ggaatgagct tcgaacagtc
    10561 tttttattcc agattggtag cgattccggt gaacatctta attgcatggc catacggtat
    10621 gtaccgcgat ctgtttatgc gcgcggcacg caaagttagc ccgtcgggct ggataaaaaa
    10681 tctggctgat atcctggctt atgtgacgtt ccagtcaccg gtgtatgtgg cgatcttgtt
    10741 agtggtgggc gcagactggc atcagattat ggcggcggtc agttcaaaca tcgttgtttc
    10801 gatgttgatg ggggcggttt atggctactt cctcgattat tgccgccgac tgtttaaagt
    10861 cagccgttac cagcaggtaa aagcctgact cttcttttcg cgactggcat cgccagtcgc
    10921 gtctttaact ggcttcgcca aataaaccat tcaaataacg ttcaagcgca acacgcgaac
    10981 tgaagccatg cgggataccg taatgctcgt gtcgctcgcc tgctaaatag agcggaaatt
    11041 gctggtaatg atcgcaagtt ttaatatcgg aagcgggttc agccagtgtt gaactgcgtt
    11101 cttttaatgt tggatgaatt accagagcgg tacgtcccat tcgcgcttcg cgattaacat
    11161 agacataatt ttccccacgg cggtaaccat acgctttctg ggttaccaca tcgacagtaa
    11221 aaccgacttt ttcaagtacg cgcgccacct cgtctggtcg taaatacata tttgatcctc
    11281 gttattttca accgcg
//
LOCUS       DADMIB010000138        11260 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.138, whole genome shotgun sequence.
ACCESSION   DADMIB010000138 DADMIB010000000
VERSION     DADMIB010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11260
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.138"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..700
                     /gene="hdhA"
                     /locus_tag="JNZ89_003331"
                     /pseudo
     CDS             1..700
                     /gene="hdhA"
                     /locus_tag="JNZ89_003331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310354.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="7-alpha-hydroxysteroid dehydrogenase"
     gene            929..1519
                     /locus_tag="JNZ89_003332"
     CDS             929..1519
                     /locus_tag="JNZ89_003332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8937100.1"
                     /translation="MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAIS
                     PGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQR
                     ALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLL
                     DLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS"
     gene            1907..3718
                     /gene="uidA"
                     /locus_tag="JNZ89_003333"
     CDS             1907..3718
                     /gene="uidA"
                     /locus_tag="JNZ89_003333"
                     /EC_number="3.2.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucuronidase"
                     /protein_id="HAY8937101.1"
                     /translation="MLRPVETPTREIKKLDGLWAFSLDRENCGIDQRWWESALQESRA
                     IAVPGSFNDQFADADIRNYVGNVWYQREVFIPKGWAGQRIVLRFDAVTHYGKVWVNNQ
                     EVMEHQGGYTPFEADVTPYVIAGKSVRITVCVNNELNWQTIPPGMVITDENGKKKQSY
                     FHDFFNYAGIHRSVMVYTTPNTWVDDITVVTHVAQDCNHASVDWQVVANGDVSVELRD
                     ADQQVVATGQGTSGTLQVVNPHLWQPGEGYLYELCVTAKSQTECDIYPLRVGIRSVAV
                     KDEQFLINHKPFYFTGFGRHEDADLRGKGFDNVLMVHDHALMDWIGANSYRTSHYPYA
                     EEMLEWADEHGIVVIDETAAVGFNLSLGIGFEAGNKPKELYSEEAVNGETQQAHLQAI
                     KELIARDKNHPSVVMWSIANEPDTRPQGAREYFAPLAEATRKLDPTRPITCVNVMFCD
                     AHTDTISDLFDVLCLNRYYGWYVQSGDLETAEKVLEKELLAWQEKLHQPIIITEYGVD
                     TLAGLHSMYTDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATSQGILRVGGN
                     KKGIFTRDRKPKSAAFLLQKRWTGMNFGEKPQQGGKQ"
     gene            3715..5088
                     /gene="uidB"
                     /locus_tag="JNZ89_003334"
     CDS             3715..5088
                     /gene="uidB"
                     /locus_tag="JNZ89_003334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide transporter"
                     /protein_id="HAY8937102.1"
                     /translation="MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAA
                     AAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTD
                     WSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV
                     CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLK
                     ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYERYVLNDTGLFTVLVLVQNLVG
                     TVASAPLVPGMVARSGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG
                     VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI
                     ANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQ
                     LISDITN"
     gene            5127..6392
                     /gene="uidC"
                     /locus_tag="JNZ89_003335"
     CDS             5127..6392
                     /gene="uidC"
                     /locus_tag="JNZ89_003335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide uptake porin UidC"
                     /protein_id="HAY8937103.1"
                     /translation="MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRA
                     DKPSAGAGRDIYAWVQRGLFDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGD
                     KSFGFALGAVKIKPCENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
                     YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDT
                     SRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETA
                     LVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVN
                     YRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKG
                     REKRDGSTLGDRLNYWDVKMSIQYDFMLK"
     gene            complement(6618..8126)
                     /locus_tag="JNZ89_003336"
     CDS             complement(6618..8126)
                     /locus_tag="JNZ89_003336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HAY8937104.1"
                     /translation="MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQL
                     KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP
                     LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
                     PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK
                     TDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL
                     DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELY
                     QEKVTEAFFSALPLMLKGDPVITVAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLA
                     QEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR
                     LTTLQDNTITTSLQYTNGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ"
     gene            complement(8227..9402)
                     /gene="manA"
                     /locus_tag="JNZ89_003337"
     CDS             complement(8227..9402)
                     /gene="manA"
                     /locus_tag="JNZ89_003337"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HAY8937105.1"
                     /translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS
                     SSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK
                     RNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP
                     VAGAHPAIAHFLQQPNAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIR
                     LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
                     LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT
                     ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL"
     gene            9601..11247
                     /locus_tag="JNZ89_003338"
     CDS             9601..11247
                     /locus_tag="JNZ89_003338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HAY8937106.1"
                     /translation="MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAP
                     EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGCDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKEL
                     LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW
                     IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG
                     RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
                     LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK"
BASE COUNT         2810 a         2634 c         2905 g         2911 t
ORIGIN      
        1 ttggtaaaga aatcgccatt acattcgcga cagctggcgc atctgtggtg gtcagtgata
       61 ttaacgccga cgcagctaac catgttgtag acgaaattca acaactgggg gggcaggcat
      121 ttgcctgccg ttgtgatatt acttccgaac aggaactctc tgcactggca gatttgctat
      181 cagtaagctg ggtaaagttg atattctggt taacaacgcc ggtggcggtg gacctaaacc
      241 gtttgatatg ccaatggcgg attttcgccg tgcttatgaa ctgaatgtgt tttctttttt
      301 ccatctgtca caacttgttg cgccagaaat ggaaaaaaat ggcggtggcg ttattctgac
      361 catcacttct atggcggcag aaaataaaaa tataaacatg acttcctatg catcatctaa
      421 agctgcggcc agtcatctgg tcagaaatat ggcatttgac ctgggtgaaa aaaatattcg
      481 ggtgaatggc attgcgccgg gggcaatatt aaccgatgcc ctgaaatccg ttattacacc
      541 agaaattgaa caaaaaatgt tacagcacac gccgatcaga cgtctgggtc aaccgcaaga
      601 tattgctaac gcggcgctgt tcctttgctc gcctgcagcc agctgggtaa gcggacaaat
      661 tctcaccgtc tccggtggtg gggtacagga gctcaattaa tacactaacg aaccggtaaa
      721 cagccgtatg tgttgtttac cgggatagcg tgtgcaattc atcaacgtct ctgctaaaca
      781 actggcagcc aaatcacggc tattggttaa ccaatagctg gatgaaaagc atacgaatag
      841 agtgtgcctt cgcactattc aacagcaatg ataggcgctc acctgacaac gcggtaaact
      901 agttattcac gctaactata atggtttaat gatggataac atgcagactg aagcacaacc
      961 gacacggacc cggatcctca atgctgccag agagattttt tcagaaaatg gatttcacag
     1021 tgcctcgatg aaagccatct gtaaatcctg cgccattagt cccgggacgc tttatcacca
     1081 tttcatctcc aaagaagcct tgattcaggc gattatctta caggaccagg agagggcgct
     1141 ggcccgtttc cgggaaccga ttgaagggat tcattttgtt gactatatgg tcgagtctat
     1201 tgtctctctc acccatgaag cctttgggca acgggcgctg gtggtcgaaa ttatggcgga
     1261 agggatgcgt aacccacagg tcgccgccat gcttaaaaat aagcatatga cgatcactga
     1321 atttgttgcc cagcggatgc gtgatgccca gcaaaaaggc gagataagcc cagacatcaa
     1381 cacgtcaatg acttcacgtt tactgctgga tctgacctac ggtgtactgg ccgatatcga
     1441 agcggaagat ctggcgcgtg aagcgtcgtt tgctcaggga ttacgcgcga tgattggcgg
     1501 tatcttaacc gcatcctgat cctctcattt cgcgggctgg tgataactgt gcccgcgttt
     1561 catactttaa tttccctgta caaaatacaa tctagccggg atcggagaat tcccccccaa
     1621 aatattcacc gtagccatat gtcatgagag tttatcgttc tcaagatgcc cgaacgaacg
     1681 ttcgattgct tattttatgg cttctgtcaa cgctgtttta aagattaatg cgatctatat
     1741 cacgctgtgc gtattgcaga ttttggtttt ttgatcgcgg tgtcagttct ttttatttcc
     1801 atttctcttc catgggtttc tcacagataa ctgtgtgcaa cacagaattg gttaactaat
     1861 cagattaaag gttgaccagt atttttattt gaatgaggag tcccttatgt tacgtcctgt
     1921 agaaacccca acccgtgaaa tcaaaaaact cgacggcctg tgggcattca gtctggatcg
     1981 cgaaaactgt ggaattgatc agcgttggtg ggaaagcgcg ttacaagaaa gccgggcaat
     2041 tgctgtgcca ggcagtttta acgatcagtt cgccgatgca gatattcgta attatgtggg
     2101 caacgtctgg tatcagcgcg aagtctttat accgaaaggt tgggcaggcc agcgtatcgt
     2161 gctgcgtttc gatgcggtca ctcattacgg caaagtgtgg gtcaataatc aggaagtgat
     2221 ggagcatcag ggcggctata cgccatttga agccgatgtc acgccgtatg ttattgccgg
     2281 gaaaagtgta cgtatcaccg tttgtgtgaa caacgaactg aactggcaga ctatcccgcc
     2341 gggaatggtg attaccgatg aaaacggcaa gaaaaagcag tcttacttcc atgatttctt
     2401 taactatgcc gggatccatc gcagcgtaat ggtctacacc acgccgaaca cctgggtgga
     2461 cgatatcacc gtggtgacgc atgttgcgca agactgtaac cacgcgtctg ttgactggca
     2521 ggtggtagca aatggtgatg tcagcgttga actgcgtgat gcggatcagc aggtggttgc
     2581 aactggacaa ggtaccagcg ggactttgca agtggtgaat ccccacctct ggcaaccggg
     2641 tgaaggttat ctctatgaac tgtgcgtcac agccaaaagc cagacagagt gtgatatcta
     2701 cccgctgcgc gtcggcatcc ggtcagtggc agtgaaggac gaacagttcc tgattaacca
     2761 caaaccgttc tactttactg gctttggtcg tcatgaagat gcggatttgc gaggcaaagg
     2821 attcgataac gtgctgatgg tgcacgatca cgcattaatg gactggattg gggccaactc
     2881 ctaccgaacc tcgcattacc cttacgctga agagatgctc gagtgggcag atgaacatgg
     2941 catcgtggtg attgatgaaa ctgcagctgt cggctttaac ctctctttag gcattggttt
     3001 cgaagcgggc aacaagccga aagaactgta cagcgaagag gctgtcaacg gggaaactca
     3061 gcaggcgcac ttacaggcga ttaaagagct gatagcgcgt gacaaaaacc acccaagcgt
     3121 ggtgatgtgg agtattgcca acgaaccgga tacccgtccg caaggtgcac gagaatattt
     3181 cgcgccactg gcggaagcaa cgcgtaaact cgacccgacg cgtccgatca cctgcgtcaa
     3241 tgtaatgttc tgcgacgctc acaccgatac catcagcgat ctctttgatg tgctgtgcct
     3301 gaaccgttat tacggatggt atgtccaaag cggcgatttg gaaacggcag agaaggtact
     3361 ggaaaaagaa cttctagcct ggcaggagaa actgcatcag ccgattatca tcaccgaata
     3421 cggcgtggat acgttagccg ggctgcactc aatgtacacc gacatgtgga gtgaagagta
     3481 tcagtgtgca tggctggata tgtatcaccg cgtctttgat cgcgtcagcg ccgtcgtcgg
     3541 tgaacaggta tggaatttcg ccgattttgc gacctcgcaa ggcatattgc gcgttggcgg
     3601 taacaagaag gggatcttca cccgcgaccg caaaccgaag tcggcggctt ttctgctgca
     3661 aaaacgctgg actggcatga acttcggtga aaaaccgcag cagggaggca aacaatgaat
     3721 caacaactct cctggcgcac catcgtcggc tacagcctcg gtgacgtcgc caataacttc
     3781 gccttcgcaa tgggggcgct cttcctgttg agttactaca ccgacgtcgc tggcgtcggt
     3841 gccgctgcgg cgggcaccat gctgttattg gtgcgggtat tcgatgcctt cgccgacgtc
     3901 tttgccggac gagtggtgga cagtgtgaat acccgctggg gaaaattccg cccgttttta
     3961 ctcttcggta ctgcgccgtt aatgatcttc agcgtgctgg tattctgggt accgaccgac
     4021 tggagccata gcagcaaagt agtgtatgca tatttgacct acatgggcct cgggctttgc
     4081 tatagcctgg tgaatattcc ttatggttca cttgctaccg cgatgaccca acaaccacaa
     4141 tcccgcgccc gtctgggcgc ggctcgtggg attgccgctt cattgacctt tgtctgcctg
     4201 gcatttctga tagggccgag cattaagaac tccagcccgg aagagatggt gtcggtatac
     4261 catttctgga cgattgtgct ggcgattgcc ggaatggtgc tttacttcat ctgcttcaaa
     4321 tcgacgcgtg agaatgtggt acgtatcgtt gcgcagccgt cattgaagat cagtctgcaa
     4381 accctgaaac ggaatcgccc gctgtttatg ttgtgcatcg gtgcgctgtg tgtgctgatt
     4441 tcgacctttg cggtcagcgc ctcgtcgttg ttctacgagc gctatgtgtt aaatgatacc
     4501 gggctgttca ctgtgctggt actggtgcaa aacttggttg gtactgtggc atcggcaccg
     4561 ctggtgccgg ggatggtcgc gaggagcggt aaaaagaata ccttcctgat tggcgctttg
     4621 ctgggaacct gcggttatct gctattcttc tgggtttccg tctggtcact gccggtggcg
     4681 ttggttgcgt tggccatcgc ttcaattggt cagggcgtta ctatgactgt gatgtgggca
     4741 ctggaagctg ataccgtaga atacggtgaa tacctgaccg gcgtgcgaat tgaagggctc
     4801 acctattcac tattctcatt tacccgtaaa tgcggtcagg caatcggagg ttcaattcct
     4861 gcctttattt tgggattaag cggatatatc gccaatcagg tgcaaacgcc ggaagttatt
     4921 atgggcatcc gcacatcaat tgccttagta ccttgcggat ttatgctact ggcattcgtt
     4981 attatctggt tttatccgct cacggataaa aaattcaaag aaatcgtggt tgaaattgat
     5041 aatcgtaaaa aagtgcagca gcaattaatc agcgatatca ctaattaata ttcaataaaa
     5101 ataatcagaa catcaaaggt gcaactatga gaaaaatagt ggccatggcc gttatttgcc
     5161 tgacggctgc ctctggcctt acctctgctt atgcggcgca actggctgac gatgaagcgg
     5221 gactacgcat cagactgaaa aacgaattgc gcagggcgga taagcccagt gctggcgcgg
     5281 gaagagatat ttacgcatgg gtacagagag gattgttcga tttcaatagt ggttattatt
     5341 ccaatattat tggcgttgaa ggcggggcat attatgttta taaattaggt gctcgtgctg
     5401 atatgagtac ccggtggtat cttgatggtg ataaaagttt tggctttgcc ctgggggcag
     5461 taaaaataaa accctgtgaa aatagcctgc ttaaattagg tcgcttcggg acggattata
     5521 gttatggtag cttaccttat cgtattccgt taatggctgg cagttcgcaa cgtacattac
     5581 cgacagtttc tgaaggagca ttaggttatt gggctttaac accaaatatt gatctgtggg
     5641 gaatgtggcg ttcacgagta tttttatgga ctgattcaac aaccggtatt cgtgatgaag
     5701 gggtgtataa cagccagacg ggaaaatacg ataaacatcg cgcacgttct tttttagccg
     5761 ccagttggca tgatgatacc agtcgctatt ctctgggggc atcggtacag aaagatgttt
     5821 ccaatcagat acaaagtatt ctcgagaaaa gcataccgct cgacccgaat tatacgttga
     5881 aaggggaatt gctcggcttt tacgcgcagc tcgaaggttt aagtcgtaat accagccagc
     5941 ccaatgaaac ggcgttggtt agtggacaat tgacctggaa tgcgccgtgg ggaagcgtat
     6001 ttggcagtgg tggttatttg cggcatgcaa tgaatggtgc cgtggtggat accgacattg
     6061 gctatccctt ttcattaagt cttgatcgta accgtgaagg aatgcagtcc tggcaattgg
     6121 gcgtcaacta tcgtttaacg ccgcaattta cactgacatt tgcaccgatt gtgactcgcg
     6181 gctatgaatc cagtaaacga gatgtgcgga ttgaaggcac gggtatctta ggtggtatga
     6241 actatcgggt cagcgaaggg ccgttacaag ggatgaattt ctttcttgct gccgataaag
     6301 ggcgggaaaa gcgcgatggc agtacgctgg gcgatcgcct gaattactgg gatgtgaaaa
     6361 tgagtattca gtatgacttt atgctgaagt aagaaataac gccggagaga aaaacctccg
     6421 gcgtttcaga ttgttgacaa agtgcgcgtt ttttatgccg gatgcggcgt aaacgcctta
     6481 tccagcctac aaaaactcat aaattcaaag tattgcagga aaaggtaggc ctgataagcg
     6541 tagcgcatca ggcaatctct ggtttgtttt cagatgaaaa cgccgaagtg aaaattctcc
     6601 ggcgttttgg ccgtgaatta ctgctgcgga attgccggta cagccggaac gttaagagct
     6661 ggcatcgcaa acatgccaac aaaatcttct aacgacattt tctgcccatt taacgttatc
     6721 tgaccgttag tatattgcag gctggtggtg atggtattgt cctgcaaggt ggtcagacgg
     6781 aacatctgcc ccattgctga tgcaccttca acttgctgtt tcgccagttt tttcgcttga
     6841 tcttcctgat aaccttccag cttcgctacc tgagtcataa actcagttgc catatccacc
     6901 ggaatggtca gtttcgcatc cagagattta accgaacgat ctacttcctg cgccagcgtt
     6961 tgcggcgctt ctttagtcgt tgccggatct ttcaggaaca gcgacagatt cagcgcactt
     7021 tcaccctgac tgtttttcca gcttagcggc gcgacagtaa tcaccggatc gcctttcaac
     7081 atcagcggca gggcgctaaa gaaggcttcc gtcactttct cctgataaag ttcgggattg
     7141 ttggcaattt ctggctgtgc cagcagcgcc tgagtttgcg cgttatattg ctggctgaac
     7201 tgatgccagg cttcaccatc aatctggccg acttttaaag tcagcttgcc gctgcccaga
     7261 tcctgattct gtaccttcag gctgtttagc gagtaatcca gttggctatt gatcgtttta
     7321 ccgtcattga ccagatccga tttaccgctg atctccatgc cttccagcag tgccagttct
     7381 ttgccttcca ctgaaatggt cattttttcc agtgacagtt tttggtttcc tacgcgctca
     7441 ccaaaacttg ccagcgtgct ggaaccgtcg gttttcagat tattaaaggt caactgcact
     7501 ttctggttgt attcgttaac tgcgtctatc cgaccacttt gcgcctcccc ggaaagggag
     7561 atggctttgc cgtctctgtc agcatttaac tggaactcgc cgccgctaaa ggcgactttt
     7621 tcatcctttt gctcgtaatt cagtggcttg agcgaaatat cggaactgga atcaccgctg
     7681 taaccaatgc gcgagttaat ctcaaaaggc gtttcacctt ttgccatatc aaacagtggt
     7741 ttgcttactt cgttattaac cagcgtggtt tgaattgatg ccatcgacgg gatcaggttc
     7801 agttttttaa gctgggcaag cgggaaggga ccatgatcaa ccgattcgtt gaagatgacg
     7861 ctctgaccgc ttttaatcca cggattttct ttcccggcaa tgggtttcac caacagttgc
     7921 aactggctgc tgaatacgcc gcgatgatag ttttgataac tcacttccag gttggattca
     7981 ggagctgtca gttttagttg cgcgttcgcc tgcgcgacca tgtcttcgag atgggtttca
     8041 atcttcttgc ctgtatacca tgcgccgcct gtccagacta cgcctagcgc aacaatgacg
     8101 cctaccgcta ccagcgattt attcataatg attatccata aaatgaaatc aggcggactg
     8161 gccgcctgaa ggtgttataa gcctttaata agcttagcaa gagatgttaa ttttttcagt
     8221 aagctcttac agcttgttgt aaacacgcgc taaacggccg tggcctttga cagtcaccgg
     8281 tgattcgttg gcggcaataa acgctgattc acccggttta agctgtaact gctgagaacc
     8341 tttccacaac gttgcatcgc cttcgacgca gaacaaaatg gcggcactct gctggctaat
     8401 ggtggtttct ttatcactaa ggtcatgcag cgagaaggca aaatcatcca ctggaatcgg
     8461 gaagtccagt tctgcacctt gtttcaccgg ctgggtcaac aactggttag ccggtttggc
     8521 ttcgaatttc acattggcaa ccagttccgg aatatcaatg tacttaggcg tcagacccgc
     8581 acgcagcacg ttatcggagt tcgccatcac ttccagcgcc acgccttgca ggtaagcgtg
     8641 cggtgtttca gcgaacagga acatcgcttc gccaggattc aatttcacca cattcagtaa
     8701 cagcggggag aacaggccgc tgtcttccgg gtaaaattca gaaattaaac gaatcgtttg
     8761 ccacggttca ccctgctgac tgtcgagcgc cgattttaaa atcgccagcg cgcgggattt
     8821 ttcttcaccc tgcatattca acaggctggc gaacagttcg cttaaacgtt cggcattagg
     8881 ctgttgtaaa aagtgagcaa ttgccggatg tgcacctgcg actggctgga gtagggagac
     8941 aatctcggaa aactcacgaa acgcgttcat cgcaaggaaa ggcgtcagcg caaaaaccag
     9001 ctccggcttg tggttaggat ctttatagtt acgctcggcg gcatccatcg ggatacctgc
     9061 ggcattttct ttggcaaaac cgatttcaga attgcgtttg tttggatgaa cctgaatgga
     9121 gagcggctgt gctgcgcata atactttgaa caggaaaggc agttcgccaa agcgtttggc
     9181 aacggcctct ccgagcagag tcgatttatc actctcaatc acatcacgca gtgaaacgat
     9241 atctccggcg gcattctgca ctcgtgaact gcttttcgga tgtgcgccca tccacagctc
     9301 ggccatcggc tggctggacg gattttccat accataaagt tcagtcaacg ccgttttgct
     9361 gccccaggca tagttttgca ctgagttaat gagtttttgc atgatcaatc cctgttttaa
     9421 tgtggaaatt aatcccacta ttaaagcaag aatcctacgg gaagtaacct ggagccgcaa
     9481 aaagtcgtac tagtctcagt ttttgttaaa aaagtgtgta ggatattgtt actcgctttt
     9541 aacagggcaa cggaacaccc gcccagagca taaccaaacc aggcagtaag tgagagaaca
     9601 atgtcaaaca aaccctttca ttatcaggct ccttttccac tcaaaaaaga tgatactgag
     9661 tattacctgc taaccagcga acacgttagc gtatctgaat ttgaagggca ggagattttg
     9721 aaagtcgcac ccgaagcgtt aactctgttg gcgcgtcagg cgtttcatga tgcgtcattt
     9781 atgctgcgtc cggctcacca acaacaggtg gccgacattc tgcgtgaccc ggaagccagc
     9841 gaaaatgata aatatgtggc gctgcaattc ctgcgcaact ccgacatcgc ggcgaaaggt
     9901 gttctgccaa cctgtcagga taccggcact gcgattattg ttggtaaaaa agggcagcgt
     9961 gtatggaccg gtggctgtga tgaagcggcg ctggcgcgcg gtgtctataa cacttatatc
    10021 gaagataatt tgcgctactc gcaaaacgcg ccgctggata tgtataaaga ggtgaatacc
    10081 ggcaccaatc tgccagcgca gatcgatctt tatgccgttg atggcgacga gtacaaattc
    10141 ctctgtatcg ccaaaggtgg tggttcggca aacaagacgt atctctatca ggaaaccaaa
    10201 gcgttactaa cgccggggaa actgaaaaat tacctggttg agaagatgcg cacgctgggt
    10261 acggcggcct gtcctccgta tcatattgcg ttcgtaattg gtggaacttc tgcagaaact
    10321 aaccttaaaa cagtgaaact ggcttccgct aaatactatg acgaactgcc aacggaaggg
    10381 aatgagcacg gtcaggcatt ccgcgatgtg gaactggaaa aagaattgct gatcgaagcg
    10441 caaaatctcg gtctgggtgc gcagtttggt ggtaaatact tcgctcacga catacgcgtg
    10501 attcgcctgc cacgtcacgg cgcatcctgt ccggttggta tgggtgtttc ctgctctgct
    10561 gaccgtaata tcaaagcgaa gatcaaccgt caggggatct ggatcgaaaa actggaacat
    10621 aatccaggta aatatatccc tgaagagctg cgtaaagcgg gagaaggcga agcggtgcgc
    10681 gttgacctta accgtccgat gaaagagatc ctcgcacagt tgtcgcagta tcccgtttct
    10741 acacgcttat cgcttaacgg cacgattatc gtcggtcgtg atattgctca cgccaaactg
    10801 aaagagcgga tggataacgg tgaagggctg ccgcagtaca ttaaagatca tccgatttac
    10861 tacgcgggtc cggccaaaac gccggaaggt tatgcctccg gttctcttgg cccaacgacc
    10921 gccggacgga tggattctta tgtcgatcaa ctgcaagcgc agggcggaag tatgatcatg
    10981 ctggcgaaag gcaaccgcag ccagcaggtg acggatgcct gtaaaaaaca cggcggcttc
    11041 taccttggca gtatcggtgg tccggccgct gtattggcgc agggaagtat taagagcctg
    11101 gaatgtgttg aatatccgga actgggaatg gaagccatct ggaaaattga agtggaagat
    11161 ttcccggcgt ttatccttgt ggatgataaa ggaaatgact tcttccagca gatacaactc
    11221 acacagtgca ctcgctgtgt gaaataaaca gagccgccct
//
LOCUS       DADMIB010000139        11242 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.139, whole genome shotgun sequence.
ACCESSION   DADMIB010000139 DADMIB010000000
VERSION     DADMIB010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11242
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.139"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1071
                     /locus_tag="JNZ89_003339"
     CDS             <1..1071
                     /locus_tag="JNZ89_003339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY8937107.1"
                     /translation="IEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEAWQSRAVI
                     RYDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPT
                     PFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAV
                     FSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLS
                     CRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMP
                     PVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEEN
                     QGSNLSGPFLPGQSRTFSYRLA"
     gene            1919..3487
                     /gene="cydA"
                     /locus_tag="JNZ89_003340"
     CDS             1919..3487
                     /gene="cydA"
                     /locus_tag="JNZ89_003340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HAY8937108.1"
                     /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG
                     KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN
                     FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR
                     SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD
                     QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG
                     STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI
                     MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP
                     WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR
                     YHFEQSSTTTQPAR"
     gene            3503..4642
                     /gene="cydB"
                     /locus_tag="JNZ89_003341"
     CDS             3503..4642
                     /gene="cydB"
                     /locus_tag="JNZ89_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HAY8937109.1"
                     /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT
                     ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
                     GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN
                     FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA
                     GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP
                     LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
                     LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY"
     gene            4657..4770
                     /gene="cydX"
                     /locus_tag="JNZ89_003342"
     CDS             4657..4770
                     /gene="cydX"
                     /locus_tag="JNZ89_003342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HAY8937110.1"
                     /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI"
     gene            4770..5063
                     /gene="ybgE"
                     /locus_tag="JNZ89_003343"
     CDS             4770..5063
                     /gene="ybgE"
                     /locus_tag="JNZ89_003343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HAY8937111.1"
                     /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS
                     ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIIGLIFFFF"
     gene            5213..5617
                     /gene="ybgC"
                     /locus_tag="JNZ89_003344"
     CDS             5213..5617
                     /gene="ybgC"
                     /locus_tag="JNZ89_003344"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HAY8937112.1"
                     /translation="MNTTLFRWPARVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
                     FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT
                     LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ"
     gene            5614..6306
                     /gene="tolQ"
                     /locus_tag="JNZ89_003345"
     CDS             5614..6306
                     /gene="tolQ"
                     /locus_tag="JNZ89_003345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolQ"
                     /protein_id="HAY8937113.1"
                     /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
                     AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE
                     AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
                     QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
                     RQAFTVSESNKG"
     gene            6310..6738
                     /gene="tolR"
                     /locus_tag="JNZ89_003346"
     CDS             6310..6738
                     /gene="tolR"
                     /locus_tag="JNZ89_003346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HAY8937114.1"
                     /translation="MARARGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
                     VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN
                     PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI"
     gene            6803..7984
                     /gene="tolA"
                     /locus_tag="JNZ89_003347"
     CDS             6803..7984
                     /gene="tolA"
                     /locus_tag="JNZ89_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HAY8937115.1"
                     /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG
                     GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER
                     LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAA
                     KKAAADAKKKAEAEAAKAAAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEKAK
                     AEAEKKAAAEKAAADKKAAADKKAAEKAAAEKAAADKKAAAEKAAAEADDIFGELSSG
                     KNAPKTGGGAKGNNASPAGSGNTKNNGASGADINNYAGQIKSAIESKFYDASSYAGKT
                     CTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLDFK
                     P"
     gene            8117..9409
                     /gene="tolB"
                     /locus_tag="JNZ89_003348"
     CDS             8117..9409
                     /gene="tolB"
                     /locus_tag="JNZ89_003348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HAY8937116.1"
                     /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW
                     AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPSAWSALGIDAVVVG
                     QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
                     GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT
                     FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA
                     SGQIRQVTDGRSNNTEPTWFPDSQNLVFTSDQAGRPQVYKVNINGGAPQRITWEGSQN
                     QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS
                     SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL"
     gene            9444..9965
                     /gene="pal"
                     /locus_tag="JNZ89_003349"
     CDS             9444..9965
                     /gene="pal"
                     /locus_tag="JNZ89_003349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HAY8937117.1"
                     /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD
                     ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK
                     VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE
                     AAYSKNRRAVLVY"
     gene            9975..10766
                     /gene="cpoB"
                     /locus_tag="JNZ89_003350"
     CDS             9975..10766
                     /gene="cpoB"
                     /locus_tag="JNZ89_003350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein CpoB"
                     /protein_id="HAY8937118.1"
                     /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ
                     LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS
                     SGGAAAQSTSSDQSGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQD
                     DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD
                     AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM"
     gene            10931..11006
                     /locus_tag="JNZ89_003351"
     tRNA            10931..11006
                     /locus_tag="JNZ89_003351"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10964..10966,aa:Lys,seq:ttt)
     gene            11042..11117
                     /locus_tag="JNZ89_003352"
     tRNA            11042..11117
                     /locus_tag="JNZ89_003352"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11075..11077,aa:Val,seq:tac)
     gene            11120..11195
                     /locus_tag="JNZ89_003353"
     tRNA            11120..11195
                     /locus_tag="JNZ89_003353"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11153..11155,aa:Lys,seq:ttt)
BASE COUNT         2783 a         2631 c         3003 g         2825 t
ORIGIN      
        1 attgaagaaa gctctgatga tggtgatgaa tatgactatt cacccgcaaa agaagagtgg
       61 gtaattaccg cagcgaacgc gaaaccgcaa tgcgatatta ttcatgaagc ctggcagagc
      121 agggctgtta tccgctatga catggcagtg ccgctcaatt tgtcagaacg cagcgcccgg
      181 caatccactg gcagagtagg ggtggtgttg gttgtcactc ttagtcataa cagcaggcgt
      241 attgatgtgg atatcaacct tgataaccag gctgacgatc atcgccttcg tgtcctggtc
      301 cctacacctt ttaacaccga cagtgttctg gcagatacgc agtttggttc gctaacgcgc
      361 cccgtgaacg acagtgcaat gaacaactgg cagcaagaag gctggaaaga agcgccggtt
      421 ccggtatgga atatgctcaa ctatgttgcc ttacaggaag ggcgtaacgg catggctgtc
      481 tttagcgaag ggttacgtga atttgaagtc atcggtgaag agaagaaaac ctttgccatt
      541 acgttgctgc gtggcgtggg cttactgggc aaagaagatc tgcttttaag gcctgggcgg
      601 ccttcgggaa ttaaaatgcc agtcccggac tcacaactac gtggtctgct ttcttgtcgc
      661 ctaagtttat tgagttatac cggtacgcca accgccgctg gtgtagctca gcaggcgcga
      721 gcatggctga ctccagtaca gtgttacaac aaaatcccat gggatgcgat gaagctcaac
      781 aaagccggat tcaacgtgcc ggaaagttat agtttgttga aaatgccccc agtgggatgc
      841 ctgataagcg cacttaagaa agctgaagac cgacaagaag tgattttacg gctgtttaat
      901 ccggctgaat cagcaacctg tgatgcgact gttgctttca gtcgcgaggt gatttcttgc
      961 tcagaaacga tgatggatga acacattacc accgaggaaa atcaaggttc aaatctatcg
     1021 gggccttttt tacccggcca gtcacggacg ttcagttacc ggcttgcctg aatagcaatc
     1081 aaaccgaagc cacatatgcg cggccagatt gttgacaaag ggcgctttgt tcatgccgga
     1141 tacggcatga acgctttatt cggtctacaa aagcaggcaa attcaatata ttgcagagat
     1201 gatgtagaca ctggcaagcg tagcgcatca ggtaattttg cgtttatctt cactctcaag
     1261 ccacgtatat gtggctttat ttttaacaaa ataataaccc tgggtgagtt aattataata
     1321 taattataag ttaattaaat gttaatatcg gcgggggtgg atttatgcct ttattagtaa
     1381 tcctgaaact ctgcgtcgta ttagccagtg accaaaaaaa gaattaaggt caaccgtgct
     1441 gtttttgctt cgtctctttt tatctttaat tgccaaccga aactaatttc agccttataa
     1501 ctcacacatt ttaaacataa atgtcactaa agttacctta ttgaaacatg attaacataa
     1561 tttgtaggaa ttgatattta tcaatgtata agtcttggaa atgggcatca aaaagagata
     1621 aattgttctc gatcaaattg gctgaaaggc ggtaatttag ctataaattg atcaccgtcg
     1681 aaaaatgcaa atttgcttca acaaaaacct gtttattgta aggattttgc ggcgtaatat
     1741 atacgtggga tcaatttgag tttttattaa catgtttgca acctttcttt acgccgtttt
     1801 tgtgtgcatt cacatggtat gatgaaagtg ttcaaacaaa tttctattgg ggcatgcgtg
     1861 tgaccctttc taacggggtt cactctcgga gtcttcatgc gatgagcaag gagtcatgat
     1921 gttagatata gtcgaactgt cgcgcttaca gtttgccttg accgcgatgt accacttcct
     1981 ttttgtgcca ctgacgctcg gtatggcgtt cctgctggcc attatggaaa cggtctacgt
     2041 cctctccggc aaacagattt ataaagatat gaccaagttc tggggcaagt tgtttggtat
     2101 caacttcgct ctgggtgtgg ctaccggtct gaccatggag ttccagttcg ggactaactg
     2161 gtcttactat tcccactatg taggggatat cttcggtgcg ccgctggcaa tcgaaggtct
     2221 gatggccttc ttcctcgaat ccacctttgt aggtctgttc ttcttcggtt gggatcgtct
     2281 gggtaaagtt cagcatatgt gtgtcacctg gctggtggcg ctcggttcaa acctgtccgc
     2341 actgtggatt ctggttgcga acggctggat gcaaaaccca atcgcgtccg atttcaactt
     2401 tgaaactatg cgtatggaga tggtgagctt ctccgagctg gtgcttaacc cggttgctca
     2461 ggtgaaattc gttcacactg tagcgtctgg ttatgtgact ggcgcgatgt tcatcctcgg
     2521 tatcagcgca tggtatatgc tgaaaggtcg tgacttcgcc ttcgctaaac gctcctttgc
     2581 tatcgctgcc agcttcggta tggctgctgt tctgtctgtt attgttctgg gtgatgaatc
     2641 cggctacgaa atgggcgacg tgcagaaaac caaactggct gctattgaag ccgagtggga
     2701 aacgcaacct gcgcctgctg cctttactct gttcggcatt cctgatcagg aagaggagac
     2761 gaacaaattt gcgattcaga tcccttacgc actgggcatc attgcaacgc gttccgtgga
     2821 taccccggtt atcggcctga aagagctgat ggtgcagcat gaagaacgca ttcgtaacgg
     2881 gatgaaggcg tactctctgc tcgaacaact gcgttctggt tctaccgacc aggcggttcg
     2941 tgaccagttc aatagcatga agaaagacct cggttacggt ctgctgctga aacgctatac
     3001 gccaaacgtg gctgatgcga ctgaagcgca gattcaacag gcaactaaag actccattcc
     3061 gcgtgtagcg ccgctgtact tcgcgttccg tattatggtg gcgtgtggct tcctgctgct
     3121 ggcaatcatc gcgctctctt tctggagtgt catccgcaac cgcattggcg agaaaaaatg
     3181 gctgctgcgc gccgcgctgt acggtattcc gctgccgtgg attgctgtag aagcgggctg
     3241 gttcgtggct gaatatggcc gccaaccgtg ggctatcggt gaagtgctgc cgacagctgt
     3301 ggcgaattcg tcactgaccg caggcgatct catcttctca atggtgctga tttgcggcct
     3361 gtataccctg ttcctggtgg cagaattgtt cttaatgttc aaatttgcac gcctcggccc
     3421 aagcagcctg aaaaccggtc gctatcactt tgagcagtct tccacgacta ctcagccggc
     3481 acgctaagac aggagtcgtc aaatgatcga ttatgaagta ttgcgtttta tctggtggct
     3541 gctggttggc gttctgctga ttggttttgc agtcactgac ggtttcgaca tgggggtggg
     3601 catgctcacc cgtttcctcg gtcgtaacga caccgagcgt cgaattatga ttaactccat
     3661 tgcaccacac tgggacggta accaggtttg gctgatcacc gcgggcggcg cactctttgc
     3721 tgcctggccg atggtctatg ccgctgcgtt ctccggcttc tatgtggcga tgatcctcgt
     3781 gctggcgtct ttgttcttcc gtccggtcgg ttttgactac cgctccaaga ttgaagaaac
     3841 ccgctggcgt aacatgtggg actggggcat cttcattggt agcttcgttc cgccgctggt
     3901 aattggtgtt gcgttcggta acctgttgca gggcgtaccg ttcaacgttg atgaatatct
     3961 gcgtctgtac tacaccggta acttcttcca gttgcttaac ccgttcggcc tgctggcagg
     4021 cgtggtgagc gtagggatga tcattactca gggcgcaacc tatctgcaaa tgcgtaccgt
     4081 gggcgaactg cacctgcgta cccgtgcaac ggctcaggtg gctgcgctgg tgacactggt
     4141 ctgtttcgca ctggctggcg tatgggtgat gtacggtatc gatggttatg tcgtgaaatc
     4201 gacaatggac cattacgcag cctctaaccc actgaataaa gaagtggttc gtgaagctgg
     4261 cgcatggctg gttaacttca acaacacgcc aattctgtgg gctattccgg cactgggtgt
     4321 ggttctgccg ctgctgacca tcctgactgc acgtatggat aaagccgcgt gggcgtttgt
     4381 gttctcctcc ctgacgctgg cctgcatcat cctgacagcc ggtatcgcaa tgttcccgtt
     4441 tgtgatgccg tccagcacca tgatgaacgc aagtctgaca atgtgggatg caacttccag
     4501 ccagctgacg cttaacgtca tgacctgggt tgcggtggtt ctggtaccga tcattctgct
     4561 ctacaccgcc tggtgttact ggaaaatgtt cggtcgtatc accaaagaag atattgaacg
     4621 taacacccac tctctgtact aagtaaggag ctaaaaatgt ggtatttcgc atggattctg
     4681 ggaacgcttc ttgcctgttc gtttggggta atcaccgcgc tggcgcttga acacgtcgaa
     4741 tcaggcaaag ccggtcaaga agacatctga tgagtaagat tatcgcgacc ttgtatgcgg
     4801 taatggacaa gcgccccctg cgggcgcttt ccttcgtgat ggcgcttctg ttagcaggat
     4861 gtatgttttg ggacccatct cgttttgccg cgaagaccag tgaactggaa atctggcatg
     4921 gtttattgct gatgtgggcc gtctgtgctg gtgtgattca cggcgtgggc tttcgtccgc
     4981 agaaggttct ttggcaaggg attttttgcc cattgcttgc cgatattgtt ctcattatcg
     5041 ggctgatttt cttcttcttt taaatcagaa ttctctttaa aaaattatgg gccgctccag
     5101 gcccataaat ttttacgctc ccttaacttg ccctcattcc caaacctcaa tcgcgcgcgt
     5161 atagtagcag cgtttaaaag ctctaacttt tgttgcatta ccgggatgta aagtgaatac
     5221 aacgctgttt cgatggccgg ctcgcgtcta ctatgaagat accgatgccg gtggtgtggt
     5281 gtaccacgcc agttacgtcg ctttttatga aagagcacgc acagagatgc tgcgtcatca
     5341 tcacttcagt cagcaggcgc tgatggctga acgcgttgcc tttgtggtac gtaaaatgac
     5401 ggtggaatat tacgcacctg cgcggctcga cgatatgctc gaaatacaga ctgaaataac
     5461 atcaatgcgt ggcacctctt tggttttcac gcaacgtatt gtcaacgccg agaatacttt
     5521 gctgaatgaa gcagaggttc tggttgtttg cgttgaccca ctcaaaatga agcctcgtgc
     5581 gcttcccaag tctattgtcg cggagtttaa gcagtgactg acatgaatat ccttgatttg
     5641 ttcctgaagg ctagccttct ggttaaactt atcatgttga ttttgattgg tttttcaatc
     5701 gcatcctggg ccattattat ccagcggacc cgtattctta acgcagcggc gcgcgaagcc
     5761 gaagcgtttg aagataaatt ctggtctgga atcgaactct ctcgcctcta tcaagagagt
     5821 caggggaaac gggataatct gactggttcg gaacaaatat tttacagcgg gttcaaagag
     5881 tttgtgcgcc tgcatcgtgc caatagccat gcgccggaag ccgtagtgga aggggcgtcg
     5941 cgtgctatgc gtatctccat gaaccgtgaa cttgaaaatc tggaaacgca cattccgttc
     6001 ctcggtacgg ttggctccat cagcccgtat attggtctgt ttggtacggt ctgggggatc
     6061 atgcatgcct ttatcgccct cggggcggta aaacaagcaa cactgcaaat ggttgcgccc
     6121 ggtatcgcag aagcgttgat tgcgactgca attggtctgt ttgccgctat cccggcagtt
     6181 atggcctaca accgcctcaa ccagcgcgta aacaaactgg aactgaatta cgacaacttt
     6241 atggaagagt ttaccgcgat tctgcaccgc caggcgttta ccgttagcga gagcaataag
     6301 gggtaagtca tggccagagc gcgtggacga ggtcgtcgcg aacttaagtc cgaaatcaac
     6361 attgtaccgt tgctggacgt actgctggtg ctgttgctga tcttcatggc gacagcgccc
     6421 atcatcaccc agagcgtgga ggtcgatctg ccagacgcta ctgaatcaca ggcggtgagc
     6481 agtaacgata atccgccagt gattgttgaa gtgtctggta ttggtcagta caccgtggtg
     6541 gttgagaaag atcgcctgga gcgtttacca ccagagcagg tggtggcgga agtgtccagc
     6601 cgcttcaagg ccaacccgaa aacggtcttt ctgatcggtg gcgcaaaaga tgtgccttac
     6661 gatgaaataa ttaaagcact gaacttgtta catagtgcgg gtgtgaaatc ggttggttta
     6721 atgacgcagc ctatctaaac atctgcgttt cccttgcttg aaagagagcg ggtaacaggc
     6781 gaacagtttt tggaaaccga gagtgtcaaa ggcaaccgaa caaaacgaca agctcaagcg
     6841 ggcgataatt atttcagcag tgctgcatgt catcttattt gcggcgctga tctggagttc
     6901 gttcgatgag aatatagaag cttcagccgg aggcggcggt ggttcgtcca tcgacgctgt
     6961 catggttgat tcaggtgcgg tagttgagca gtacaaacgc atgcaaagcc aggaatcaag
     7021 cgcgaagcgt tctgatgaac agcgcaagat gaaggaacag caggctgctg aagaactgcg
     7081 tgagaaacaa gcggctgaac aggaacgcct gaagcaactt gagaaagagc ggttagcggc
     7141 tcaggagcag aaaaagcagg ctgaagaagc cgcaaaacag gccgagttaa agcagaagca
     7201 agctgaagag gcggcagcga aagcggcggc agatgctaaa gcgaaggccg aagcagatgc
     7261 taaagctgcg gaagaagcag cgaagaaagc ggctgcagac gcaaagaaaa aagcagaagc
     7321 agaagccgcc aaagccgcag cgcagaaaaa agccgaggca gccgctgcgg cactgaagaa
     7381 gaaagcggaa gcggcagaag cagctgcagc tgaagcaaga aagaaagcgg caactgaagc
     7441 tgctgaaaaa gccaaagcag aagctgagaa gaaagcggct gctgaaaagg ctgcagctga
     7501 taagaaagct gcagccgaca aaaaagcagc agaaaaagcg gctgctgaaa aggcagcagc
     7561 tgataagaaa gcagcggcag aaaaagccgc cgcagaggca gatgatattt tcggtgagct
     7621 aagctctggt aagaatgcac cgaaaacggg gggaggggcg aaagggaaca atgcttcgcc
     7681 tgccgggagt ggtaatacta aaaacaatgg cgcatcaggg gccgatatca ataactatgc
     7741 cgggcagatt aaatctgcta tcgaaagtaa gttctatgac gcatcgtcct atgcaggcaa
     7801 aacctgtacg ctgcgcataa aactggcacc cgatggtatg ttactggata tcaaacctga
     7861 aggtggcgat cccgcacttt gtcaggctgc gttggcagca gctaaacttg cgaagatccc
     7921 gaaaccacca agccaggcag tatatgaagt gttcaaaaac gcgccattgg acttcaaacc
     7981 gtaatcgcga tgttgactgt tcggacggtc aacatcaggc accggttgcc acggggttct
     8041 ggtagttttg tgtattttag tttgttaaca ttctgctaaa ttatcgtggg ccatcggtcc
     8101 agataaggga gatatgatga agcaggcatt acgagtagca tttggttttc tcatactgtg
     8161 ggcatcagtt ctgcatgctg aagtccgcat tgtgatcgac agcggtgtag attccggtcg
     8221 tcctattggt gttgttcctt tccagtgggc ggggcctggt gcggcacctg aagatattgg
     8281 cggcatcgtt gctgctgact tgcgtaacag cggtaaattt aatccgttag atcgcgctcg
     8341 tctgccacag cagccgggta gtgcgcagga agtacaacca tctgcatggt ccgcactggg
     8401 cattgacgct gtagttgtcg gtcaggtcac tccgaatccg gatggttctt acaatgttgc
     8461 ttatcaactt gttgacactg gcggcgcacc gggtactgta cttgctcaga actcgtacaa
     8521 agtgaacaag cagtggctgc gttatgctgg tcataccgcc agtgatgaag tgtttgaaaa
     8581 actgaccggc attaaaggtg cgttccgtac ccgtattgcc tacgttgttc agaccaacgg
     8641 cggtcagttc ccgtatgaac tgcgcgtatc tgactatgac ggttacaacc agtttgtcgt
     8701 tcaccgttca ccgcagccgc tgatgtctcc ggcgtggtca ccagacggtt ctaaactggc
     8761 ttatgtgacc ttcgaaagcg gtcgttccgc gctggttatt cagacgctgg caaatggcgc
     8821 tgtacgtcag gtggcttcat tcccgcgtca caacggtgca cctgcattct cgccagacgg
     8881 cagcaaactg gcattcgcct tgtcgaaaac cggtagtctg aacctgtacg taatggattt
     8941 ggcttctggt cagatccgcc aggtgactga tggtcgcagt aacaataccg aaccgacctg
     9001 gttcccggat agccagaacc tggtatttac ttctgaccag gccggtcgtc cgcaggttta
     9061 taaagtgaat atcaacggcg gtgcgccaca acgtattacc tgggaaggtt cgcagaacca
     9121 ggatgcggat gtcagcagcg acggtaaatt tatggtaatg gtcagctcca atggtgggca
     9181 gcagcacatt gccaaacaag atctggcaac gggaggcgta caagttctgt cgtccacgtt
     9241 cctggatgaa acgccaagtc tggcacctaa tggcactatg gtaatctaca gctcttctca
     9301 ggggatggga tccgtgctga atttggtttc tacagatggg cgtttcaaag cgcgtcttcc
     9361 ggcaactgat ggacaggtca aattccctgc ctggtcgccg tatctgtgat aataattaat
     9421 tgaatagtaa aggaatcatt gaaatgcaac tgaacaaagt gctgaaaggg ctgatgattg
     9481 ctctgcctgt tatggcaatt gcggcatgtt cttccaacaa gaacgccagc aatgacggca
     9541 gcgaaggcat gctgggtgcc ggcactggta tggatgcgaa cggcggcaac ggcaacatgt
     9601 cttccgaaga gcaggctcgt ctgcaaatgc aacagctgca gcagaacaac atcgtttact
     9661 tcgatctgga caagtacgat atccgttctg acttcgctca aatgctggat gcacatgcaa
     9721 acttcctgcg tagcaacccg tcttacaaag tcaccgtaga aggtcacgcg gacgaacgtg
     9781 gtactccgga atacaacatc tccctgggtg aacgtcgtgc gaacgccgtt aagatgtacc
     9841 tgcagggtaa aggcgtttct gcagaccaga tctccatcgt ttcttacggt aaagaaaaac
     9901 ctgcagtact gggtcatgac gaagcggcat actccaaaaa ccgtcgtgcg gtactggttt
     9961 actaagagaa ttgcatgagc agtaacttca gacatcaact attgagtctg tcgttactgg
    10021 ttggtatagc ggccccctgg gccgcttttg ctcaggcacc aatcagtagt gtcggctcag
    10081 gctcggtcga agaccgcgtc actcaacttg agcgtatttc taatgctcac agccagcttt
    10141 taacccaact ccagcaacaa ctttctgata atcaatccga tattgattcc ctgcgtggtc
    10201 agattcagga aaatcagtat caactgaatc aggtcgtgga gcggcaaaag cagatcctgt
    10261 tgcagatcga cagcctcagc agcggtggtg cagcggcgca atcaaccagc agcgatcaaa
    10321 gcggtgcggc ggcatcaacg acgccgacag ctgatgctgg tactgcgaat gctggcgcgc
    10381 cggtgaaaag cggcgatgca aacacggatt acaatgcagc tattgcgctg gtgcaggata
    10441 aatcccgcca ggatgacgca atggtggcat ttcagaattt catcaaaaat taccctgatt
    10501 caacttacct gccaaacgcc aattattggc tgggtcagtt aaactacaac aagggtaaaa
    10561 aagatgatgc ggcgtactat tttgcttcgg tagtgaaaaa ctatccgaag tcaccaaagg
    10621 ctgctgatgc gatgtttaaa gtcggcgtca tcatgcagga caaaggtgac accgcaaaag
    10681 cgaaagccgt ataccagcag gttatcagta aataccctgg tactgatggc gctaaacagg
    10741 cacaaaaacg tctgaacgcg atgtaatgca taacacacga ccagaagttg cattatttct
    10801 ggtcgtgtcg tgcgaatcat aagcagttga gtgatctgca tcgaaatttt tgttgcgctc
    10861 aagtctgaaa tcagtaatat atgccgccgt tgccacggga tatcaaacaa accgaaagca
    10921 acgaaaaagt gggtcgttag ctcagttggt agagcagttg acttttaatc aattggtcgc
    10981 aggttcgaat cctgcacgac ccaccactaa catagttagt tgtagtatcc agcgtagtat
    11041 tgggtgattg gctcagctgg gagagcacct cccttacaag gagggggtcg gcggttcgat
    11101 cccgtcatca cccaccaccg ggtcgttagc tcagtcggta gagcagttga cttttaatca
    11161 attggtcgca ggttcgaatc ctgcacgacc caccactaat tacgatgggt tcggtggaag
    11221 tagtttgtag tatccagcgc ag
//
LOCUS       DADMIB010000140        11187 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.140, whole genome shotgun sequence.
ACCESSION   DADMIB010000140 DADMIB010000000
VERSION     DADMIB010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11187)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11187)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11187
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.140"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(169..375)
                     /locus_tag="JNZ89_003354"
     CDS             complement(169..375)
                     /locus_tag="JNZ89_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfA family protein"
                     /protein_id="HAY8937119.1"
                     /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH
                     RVWSKTSDKPVWMEQAEKATGDFY"
     gene            687..776
                     /gene="kdpF"
                     /locus_tag="JNZ89_003355"
     CDS             687..776
                     /gene="kdpF"
                     /locus_tag="JNZ89_003355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HAY8937120.1"
                     /translation="MSAGVIAGVLLVFLLLGYLVYALINAEAF"
     gene            776..2449
                     /gene="kdpA"
                     /locus_tag="JNZ89_003356"
     CDS             776..2449
                     /gene="kdpA"
                     /locus_tag="JNZ89_003356"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706533.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HAY8937121.1"
                     /translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTAGVER
                     ILFRLPGVSDHEMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA
                     LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFAFIRAFTRQSM
                     STLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGP
                     VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVTGD
                     RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALSADSSINMEGKESRFGVLVSSL
                     FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF
                     IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGP
                     HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
                     SKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS"
     gene            2472..4520
                     /gene="kdpB"
                     /locus_tag="JNZ89_003357"
     CDS             2472..4520
                     /gene="kdpB"
                     /locus_tag="JNZ89_003357"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HAY8937122.1"
                     /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL
                     LTTCISIAMASGAMPGNALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKK
                     TAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG
                     ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE
                     IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV
                     AGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA
                     DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM
                     IRKGSVDAIRRHVEANGGHFPADVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK
                     GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
                     EGRLVAMTGDGTNDAPALAQADIAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK
                     QMLMTRGSLTTFSITNDVAKYFAIIPAAFAATYPQLNALNIMRLHSPDSAILSAVIFN
                     ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV
                     "
     gene            4529..5072
                     /gene="kdpC"
                     /locus_tag="JNZ89_003358"
                     /pseudo
     CDS             4529..5072
                     /gene="kdpC"
                     /locus_tag="JNZ89_003358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
     gene            5065..7749
                     /gene="kdbD"
                     /locus_tag="JNZ89_003359"
     CDS             5065..7749
                     /gene="kdbD"
                     /locus_tag="JNZ89_003359"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     KdbD"
                     /protein_id="HAY8937123.1"
                     /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAE
                     AQRLRAQGLDIVVGVVETHGRKDTDAMLEGLAVLPPKRLAYRGRHICEFDLDAALARR
                     PALILMDELAHSNALGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI
                     QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIAL
                     RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR
                     LGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE
                     HNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDSRSFK
                     DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV
                     ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR
                     EQRTRHLYEMSKALAVGRSPQDIAATIEQFIASTFHARSQVLLPDDNGKLQPLTHPQG
                     MTPWDDTIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI
                     PEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL
                     FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT
                     LEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE
                     IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV
                     DVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM"
     gene            7746..8423
                     /gene="kdpE"
                     /locus_tag="JNZ89_003360"
     CDS             7746..8423
                     /gene="kdpE"
                     /locus_tag="JNZ89_003360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator KdpE"
                     /protein_id="HAY8937124.1"
                     /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVYEAETLQRGLLEAATR
                     KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKP
                     FGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFHLL
                     AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETG
                     IGYRFML"
     gene            complement(8639..8896)
                     /locus_tag="JNZ89_003361"
     CDS             complement(8639..8896)
                     /locus_tag="JNZ89_003361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937125.1"
                     /translation="MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVG
                     RLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS"
     gene            9019..>11187
                     /gene="speF"
                     /locus_tag="JNZ89_003362"
     CDS             9019..>11187
                     /gene="speF"
                     /locus_tag="JNZ89_003362"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase SpeF"
                     /protein_id="HAY8937126.1"
                     /translation="MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVT
                     CGKLDEIDATGYGIPVFIATENQERVPAEYLPCISGVFENCESRREFYGRQLETAASH
                     YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRSDLC
                     NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVL
                     FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQR
                     TKEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCS
                     PLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMH
                     ASTSPFYPLFAALDINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELV
                     DGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGIDARNG
                     EYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL
                     ESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQPQKEMFRKEHFPRV
                     SMNPQEANYAYSRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFS
                     ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQ"
BASE COUNT         2502 a         2843 c         3065 g         2777 t
ORIGIN      
        1 aagtgagata tccatcagat agaaacaatt aggaaaatat ttatatattt ttcctgaata
       61 tatttcagct gggtaatacc atatctaaat atttacctga acatcttcct aataaaaaaa
      121 ccgccagcat ctccactagc ggttttcaat gtattcaaaa ctcggcaatc agtaaaaatc
      181 accggttgcc ttttcggcct gttccatcca aaccggttta tcgctggttt tcgaccagac
      241 gcggtgcagg tagctgtaaa agcgggcgcg gtctttccag aaaagcatga aaggcagcgc
      301 cagaacgccc gctgcaaccg catatgtacg gcgtaaaaag ataagccatg caggatattc
      361 tctgtagagt tccatacttt tctccccctt ttgtatctac ccggtgaata gcaccggaaa
      421 aatgaatttg tttatctgat gaaaatagta ccgccttttg tgtaatttta ctactcatcc
      481 gaccacttat ttttgcttat tgatggttta tttacattca ctttgtaatt aagttgcaca
      541 aaagttaaat taatgctaaa cattagttaa accatggctt ttgccatttt tatacttttt
      601 tacaccccgc ccgcagattt ttgcgaaatc tttgcagcca gaattctact cttccggtat
      661 cacttttagg ccactggagg tgcactgtga gtgcaggcgt gatagccggc gtgttgctgg
      721 tgtttttatt actgggttat ttggtttatg ccctgatcaa tgcggaggcg ttctgatggc
      781 tgcgcaaggg ttcttactga ttgccacgtt tttactggta ttaatggtgc tggcgcgtcc
      841 tttaggcagc gggctggcgc ggctgattaa tgacattcct cttccaggta cagcgggcgt
      901 tgaacgtata ctctttcgtt tacctggcgt ctctgaccat gagatgaact ggaagcaata
      961 tctttgtgcc attctcggcc tgaacatgct ggggctggcg gtgctgtttt ttatgttgct
     1021 cggtcagcac tatctgccgc ttaatccaca gcagttgccg gggctgtcgt gggatctggc
     1081 gctgaatacc gccgtcagct ttgtcacgaa taccaactgg caatcttata gcggtgaaac
     1141 cacgttgagc tatttcagcc agatggcagg cttaacggta caaaactttc tttctgccgc
     1201 cagcgggatt gcggtgattt ttgccttcat ccgtgcgttt actcgccaga gcatgagcac
     1261 actcgggaat gcctgggtcg atctgctacg catcacgtta tgggtgctag tccctgtggc
     1321 gttgttgatc gcactgtttt ttattcaaca aggtgcgctg caaaactttc tgccctatca
     1381 ggcagtgaat accgttgaag gagcgcaaca gctgttaccc atgggaccag tagcttctca
     1441 ggaagcgatc aagatgctcg gtactaacgg cggtggcttc tttaatgcca actcgtcgca
     1501 tccgtttgaa aacccaaccg cactgaccaa cttcgtgcag atgctggcga tcttcttgat
     1561 cccaacagct ctgtgctttg cctttggtga agtgacgggc gatcgccgcc aggggcgcat
     1621 gttgctgtgg gcgatgtcag tgatttttgt catctgcgta ggcgtggtta tgtgggcaga
     1681 agttcagggt aatcctcatc tgctggcgct cagcgcagac agcagcatca atatggaagg
     1741 taaagagagc cgtttcggcg tgctggtcag tagcctgttt gcggtcgtga ctacggcggc
     1801 gtcctgtggc gcggtgattg cgatgcatga ttcgtttacc gctctcggcg gcatggtgcc
     1861 gatgtggcta atgcaaattg gtgaagtggt gttcggcggt gtcggttctg gtctttacgg
     1921 catgatgctg tttgtcctgc tggcggtgtt tattgccggg ctgatgattg gtcgtacacc
     1981 ggaatatctg ggtaaaaaaa tcgacgtacg cgagatgaaa ctgactgcac tggcgattct
     2041 ggttactcca acactggtac tgatgggcgc ggcgttggcg atgatgaccg acgccggacg
     2101 tagcgccatg cttaaccctg gcccgcatgg ttttagcgaa gtgctgtacg ccgtgtcgtc
     2161 cgccgctaac aacaacggca gcgcctttgc cggattaagc gccaactctc cgttctggaa
     2221 ctgtttactg gcgttctgca tgtttgtcgg tcgcttcggg gtgattatcc cggtgatggc
     2281 aattgccggt tcgctggtga gtaaaaagag ccaacccgcc agctccggca cgctgccaac
     2341 gcacggcccg ctgtttgttg gcctgttaat cggcaccgtg ttgctggttg gcgcactgac
     2401 ctttatccct gccctggcgc ttggtccggt ggcggaatat ctctcctgat gatattgagt
     2461 gagcactgaa tatgagtcgt aaacaactgg cgctattcga accaacactt gtcgttcagg
     2521 cgctgaaaga agcggtgaaa aaattaaacc cgcaggcgca atggcgcaat ccggtgatgt
     2581 ttatcgtctg gatcggcagt ctgctgacca cctgtattag catcgcgatg gcaagcggtg
     2641 cgatgcctgg caatgcgctg tttagcgcgg caattagcgg ctggctgtgg gtcaccgtac
     2701 tgttcgctaa tttcgccgag gcgctggcag aaggccgcag taaagcgcag gccaacagtc
     2761 ttaaaggggt gaaaaaaact gcctttgccc gcaagctgcg tgagccgaaa tatggcgctg
     2821 cggcggacaa agttcctgcc gatcaactgc gtaaaggtga catcgtgctg gtagaagctg
     2881 gcgatattat cccctgcgat ggtgaagtca ttgaaggcgg cgcatcggtc gatgaaagcg
     2941 ccatcaccgg ggaatcggca ccggtgatcc gtgaatccgg cggcgatttt gcctccgtca
     3001 ccggcggcac gcgtattctt tctgactggc tggtgattga gtgtagcgtt aaccccggtg
     3061 agacatttct ggatcggatg atcgcgatgg tggaaggcgc acagcgacgc aaaacaccga
     3121 acgagattgc cctgactatc ctgctgattg ctctgaccat cgtcttttta ctggcaaccg
     3181 ccacgctgtg gccgttttcc gcgtggggcg gtaatgccgt gagtgtaacg gtactggtgg
     3241 cgctgctggt ctgtctgatc ccaaccacta ttggcggcct gttgtcagcg atcggcgtcg
     3301 ccgggatgag tcggatgctg ggcgcgaatg tgattgccac cagcggacgt gcagttgaag
     3361 cggcaggtga cgttgacgtt ctgctactgg ataaaaccgg caccatcaca ctcggtaacc
     3421 gtcaggcgtc ggagtttatc cctgcgcagg gcgtggatga aaaaacgctg gctgacgccg
     3481 cacaactggc ttcgctggct gatgaaacgc cggaaggccg cagtattgtg atcctcgcca
     3541 agcaacgttt taacctgcgc gagcgcgatg tgcagtcgct ccatgccacc tttgtaccgt
     3601 ttactgcgca aagccggatg agcgggatca acatcgacaa ccgcatgatc cgtaaaggtt
     3661 ctgtcgatgc cattcgccgc catgttgagg ctaacggcgg tcacttccct gccgatgttg
     3721 atcaaaaagt cgatcaggtt gcgcgtcagg gggccacgcc gctggtggtg gtggaaggtt
     3781 cccgtgtgct gggcgttatt gcgctgaaag atatcgtcaa aggcggtatt aaagagcgct
     3841 tcgcccagct gcgcaaaatg ggcattaaaa cggtgatgat taccggcgat aaccgtctga
     3901 ctgccgccgc cattgctgcg gaagcgggcg tcgatgattt tctcgccgaa gcgacaccgg
     3961 aggccaagct ggcattgatt cgtcagtatc aggcggaagg ccgtttggtg gcgatgaccg
     4021 gcgacggcac caacgatgct ccggcgctgg cgcaagcaga tatcgcggtg gcgatgaact
     4081 ccggcaccca ggcggcgaaa gaggcgggca atatggtcga tctcgactct aacccgacca
     4141 agttgatcga ggtggtgcat attggcaaac agatgctgat gacccgtggc tcgctgacca
     4201 ccttcagcat taccaacgat gtggcgaaat acttcgccat tattccggcg gcgttcgcgg
     4261 caacgtatcc gcagttaaat gcgctgaaca tcatgcgcct gcattcgccc gactccgcca
     4321 ttctcagtgc agtcattttc aacgccttga ttatcgtctt tttgattcct ctggcgttaa
     4381 aaggcgtgag ttataaaccg cttaccgctt ctgccatgtt gcgccgtaac ttatggattt
     4441 acggtctggg tgggctgctg gtgccgttta ttggtatcaa agtcattgat ttactgctga
     4501 ccgtttgcgg tctggtgtga ggtttaccat gcgtggctta cgtccggcat tatcgacatt
     4561 tatctttctg ttattgatta ctggcggcgt ttacccgctg ctgaccaccg tgctggggca
     4621 atggtggttt ccctggcagg ccaacggttc gttgattcgt gaaggtgata cggtgcgggg
     4681 ttcggcatta atcgggcaga attttaccgg caacggcaga aatgccctat aatccacagg
     4741 cttctggcgg gagcaatctg gcggtcagta accctgagct ggataaacaa atagccgcac
     4801 gcgttgctgc attacgggcc gctaacccgg atgccagtac gaacgttccg gttgaactgg
     4861 tgacggcatc ggcaagcggg ctggacaata atatcacccc gcaagcggcg gcctggcaga
     4921 tcccacgcat cgcgaaagcg cgtaatctca gcgttgaaca gctcacgcag ctgatcgcaa
     4981 aatacaacca acaaccgctg gtgaaatata tcggccagcc ggtcgtcaac attgtcgaac
     5041 tcaatctggc gctggataag cttgatgaat aacgaaccct tacgtcccga ccccgatcgt
     5101 ctgctggaac aaactgccgc gccgcatcgg gggaagctga aagttttctt cggtgcctgt
     5161 gcaggcgtcg ggaagacctg ggcgatgctg gcagaagccc agcgactgcg ggcgcaaggg
     5221 ctggatattg tggttggcgt ggtagaaacc cacgggcgaa aagataccga cgcaatgctg
     5281 gaagggctgg ctgttctgcc gccaaaacgc ctggcgtacc gtgggcggca catctgcgag
     5341 tttgacctcg atgccgccct cgcccgccgt ccggcgctga tcttaatgga cgaactggcg
     5401 cacagtaatg cgctaggttc tcgtcaccct aaacgctggc aggacatcga agagctgctg
     5461 gaagcaggca ttgatgtttt cactaccgtc aacgttcagc atctggaaag tctgaatgat
     5521 gtggtcagcg gcgtcaccgg aattcaggta cgggaaaccg tgcccgatcc ttttttcgat
     5581 gccgccgacg acgtggttct ggtggacttg cccccggacg atctgcgcca gcggctgaaa
     5641 gaaggcaaag tctatattgc cgggcaggcg gagcgcgcca ttgaacattt tttccgcaaa
     5701 ggcaatctga tcgccctgcg cgaactggca ctgcgccgta ctgccgatcg cgttgatgag
     5761 caaatgcgcg cctggcgggg gcatcctggc gaagagaaag tctggcacac gcgcgacgcg
     5821 atccttttat gcatcggcca taacaccggt agtgagaagc tggtccgcgc ggcggcgcgg
     5881 ctggcgtcac ggctgggtag cgtctggcac gcggtgtatg ttgaaacccc tgccctgcac
     5941 cgcttaccgg aaaaaaaacg tcgggcaatt ctcagcgcct tacgtctggc gcaggagctg
     6001 ggcgcggaga cggcaacact ttctgatcca gcggaagaaa aagcagtagt gcgttatgcc
     6061 cgtgaacata atctcggcaa gattattctc ggtcgcccgg cctcgcgccg ctggtggcgt
     6121 cgggaaacgt ttgctgaccg actggcgcgc atcgcccccg atctcgatca ggtgctggtc
     6181 gcgcttgatg aaccacccgc ccgcacgatt aacaacgcgc cggatagccg ctcttttaaa
     6241 gacaagtggc gggtacagat tcagggatgc gtggttgccg ccgcgttatg cgccgttatc
     6301 actttaattg ccatgcagtg gctgatggcg tttgatgccg ccaacctggt gatgctgtat
     6361 ctgcttggcg tggtggtggt ggcgctattt tatggacgct ggccttcggt ggttgctacc
     6421 gtcattaatg tggtgagttt cgatctcttt tttatcgccc cacgcggcac gctcgccgtc
     6481 tctgatgtgc aatatctgct gaccttcgca gtgatgttaa ccgtcgggct ggtgatcggg
     6541 aaccttactg ctggcgtgcg ttatcaggcg cgggtagccc gttaccgcga gcaacgcaca
     6601 cggcacttat atgaaatgtc gaaagctctg gcggtgggcc gcagtccgca ggacatcgcc
     6661 gccaccatcg aacaatttat tgcctccacg tttcatgccc gcagtcaggt gttgttgccc
     6721 gatgacaacg gtaaattgca gccgttaaca catccgcaag gaatgacgcc atgggacgat
     6781 accatcgcgc agtggagttt tgataaaggc ctgcctgcgg gcgcgggcac cgacacgtta
     6841 cccggtgtac cgtaccagat tttgccgcta aaaagcggcg agaaaaccta cgggctggtg
     6901 gtggtggagc cggggaatct gcgccagttg atgatcccgg aacagcagcg cctgctggag
     6961 acgtttacgc tgttagtcgc caatgccctt gagcggctga cgctaaccgc cagcgaagaa
     7021 caggcgcgga tggcaagcga acgtgaacag atccgcaacg ccctactggc agcgctttcg
     7081 catgatttac gcacgccgct cacggtgctg ttcggtcagg cagaaatctt aacgctcgat
     7141 ctggcaagcg aaggatcgcc ccacgcccgc caggccagcg agattcgtca gcatgtgctg
     7201 aacactaccc gactggtgaa taatctactg gatatggcgc gaattcagtc cggcggcttt
     7261 aatttgaaga aagagtggtt aacgctggaa gaagtggtcg gtagcgcgct gcaaatgctg
     7321 gaaccgggtt tatcgtcgcc catcaatctt tctctgccag aaccgctgac cttaatccac
     7381 gttgacgggc cactctttga acgggtgctg attaatctgc tggagaacgc ggtgaaatat
     7441 gcgggtgcgc aggccgaaat tggtatcgat gcccacgttg agggcgaaaa tctacaactg
     7501 gatgtctggg ataacggccc cggtcttccg ccaggccagg agcagacgat atttgataag
     7561 tttgctcgcg ggaataaaga gtcggcagta ccgggggtag ggcttggact ggcaatttgt
     7621 cgggcgatag tggatgtaca cgggggcact attaccgcgt tcaaccgacc ggaaggtggt
     7681 gcctgttttc gtgttacact tccccagcaa actgcccctg aacttgaaga atttcatgag
     7741 gatatgtgac aaacgttctg attgttgaag atgaacaggc tattcgtcgc tttctgcgca
     7801 cggcgctgga gggcgacggg atgcgcgtct atgaggccga aacgctgcaa cgcggcttgc
     7861 tggaagcggc tacccgtaag ccagatttga ttattctcga tctcggcctg cccgatggtg
     7921 atgggattga gtttatccgc gacctgcgcc agtggagcgc ggtgccggtg attgtgcttt
     7981 ccgcacgcag cgaagagagc gacaaaatcg ccgcgctgga tgccggagcg gatgattatc
     8041 tgagtaagcc gtttggcatt ggcgaattgc aggcccgtct gcgcgtcgct ttacgccgcc
     8101 actccgctac cgccgcgccc gatccgctgg tgaaattttc cgatgttacc gtcgatttag
     8161 ccgcccgcgt gattcaccgg ggtgaggaag aggtgcatct cacaccaatt gagttccacc
     8221 tgctggcggt gctgctcaac aatgccggaa aagtactcac ccagcgccag ctccttaacc
     8281 aggtgtgggg gccaaacgcg gtcgaacaca gtcactattt gcgtatttat atgggacatc
     8341 tgcgacaaaa actggaacag gatcccgccc gcccacgcca tttcattact gaaaccggta
     8401 ttggctatcg gtttatgctt tgaatattaa ttttaataca gcctgccttt tattaattaa
     8461 agccgtaata ataaatacgg ctttttatct taaacaacac acaaaaataa caattcaata
     8521 ttttatatta ctgagtaaaa agctcatcat taaataaatt aagattgatc attttttatt
     8581 gatcaccttc acagttcaac cgtatttcct ggatagaata tcttcacctt cattcacatc
     8641 aggaaaggta aattaaatgg aaaataacag ccgcactatg ccccatataa ggcggacaac
     8701 tcatattatg aagtttgctc atcgcaatag cttcgacttt cacttcttca atgcccgtta
     8761 gtctaccgac taagggcact tcagcgtaca ggtcttcctg actctctgta ttacaggcat
     8821 atgcctgtat tccgcagtgc tcattctctg ttaacccttg tattatcagc caccggactg
     8881 gtaagggttt ctgcattctg aaaaaagcaa tctacctgat ttatttatca gcggggtaac
     8941 tttgcttttt tccggcacga tcgatttctc attcgagaaa ttgaggacct gctattacct
     9001 aaaataaaga gatgaaaaat gtcaaaatta aaaattgcgg ttagtgattc ttgcccggac
     9061 tgttttacca cgcagcgaga atgtatctac attaatgaaa gtcgtaatat cgatgtggcg
     9121 gcaatcgttt tatcgctcaa cgatgttaca tgcggaaaac tcgatgaaat cgatgccacg
     9181 ggttatggca tcccggtatt tattgctact gaaaatcaag aacgtgtacc cgcagagtat
     9241 ttgccctgta tttcgggtgt ctttgagaat tgcgaatcgc gacgagaatt ttatggtcgt
     9301 cagttagaaa ccgctgccag ccattatgaa actcaactgc gcccaccttt cttccgcgca
     9361 ctggtcgatt atgtcaatca aggtaacagc gcgtttgatt gccctggtca tcagggcggc
     9421 gaatttttcc gtcgccatcc ggcggggaat cagtttgtgg aatactttgg tgaggcgctg
     9481 ttccgttccg acttgtgcaa cgcagacgta gcaatgggtg atctgctgat tcacgaaggc
     9541 gcgccatgca ttgcacagca acatgcggca aaagtgttca atgccgataa aacatacttc
     9601 gttctaaatg gcacttcatc ttctaacaaa gtggttttaa acgccctgct gacaccgggt
     9661 gatctggtgc tgtttgaccg caataaccac aaatctaacc accacggagc gttgctacag
     9721 gctggtgcaa caccggttta tctggaaacc gcacgtaacc cgtatggctt tatcggtggc
     9781 attgatgcgc actgttttga agaaagttac ctgcgtgagc tgatcgcgga agtcgcaccg
     9841 cagcggacaa aagaggctcg tcctttccgc ctcgccgtta ttcagctagg cacctacgac
     9901 ggtacgattt ataacgcccg ccaggtggtg gataaaattg gtcatctgtg tgactacatt
     9961 ctgtttgact ccgcatgggt cggctatgag caatttatcc cgatgatggc tgactgttca
    10021 ccgctgttgc tggatcttaa tgagaacgat ccgggcattc tggttacgca atctgtgcat
    10081 aaacagcagg ctggtttttc tcaaacttca caaatccata aaaaagacag ccacatcaaa
    10141 gggcaacagc gttatgtacc gcacaaacgc atgaacaacg cctttatgat gcatgcctcc
    10201 accagcccgt tctatccgct gtttgccgca ctggatatca acgccaaaat gcatgaaggt
    10261 gtcagcggtc gtaatatgtg gatggattgt gtggtaaatg gcattaatgc ccgcaagctg
    10321 atcctcgata actgtcagca tattcgtccg ttcgtacctg aactagtgga tggtaaaccc
    10381 tggcagtcgt atgaaacagc gcaaattgcg gttgatctgc gcttcttcca gtttgtacca
    10441 ggggaacact ggcactcttt tgaaggctat gcagagaatc aatactttgt cgatccatgc
    10501 aaactgttgc tgacaacccc aggtattgat gcacgtaacg gcgaatatga agcgttcggt
    10561 gtacccgcga cgattcttgc taacttcctg cgcgaaaatg gcgtagtgcc ggaaaaatgc
    10621 gatcttaact ccatcctctt cctgctgact ccggcagaag atatggccaa acttcagcaa
    10681 cttgttgccc tgctggtacg cttcgaaaaa ctgcttgagt ccgacgcgcc attagcagaa
    10741 gtgctgcctt ccatctacaa acagcatgaa gagcgctacg ccggttatac ccttcgtcag
    10801 ttatgccagg aaatgcatga tttgtatgcc cgtcacaacg tgaaacaacc gcaaaaagag
    10861 atgttccgta aggaacactt cccacgcgta agcatgaatc cacaagaagc caactacgcc
    10921 tattcacgcg gtgaagtgga gctggttcgt ctgccggatg ccgaaggccg tatcgctgcc
    10981 gaaggtgcgc ttccttatcc tccgggtgtg ctgtgtgttg ttccgggtga aatctggggt
    11041 ggtgctgttt tgcgttactt cagcgctctg gaagaaggga tcaacctgct gccaggtttt
    11101 gcaccggagc tgcagggtgt ctatatcgaa gaacatgatg gtcgtaagca agtttggtgc
    11161 tatgtcatca agcctcgtga tgcgcaa
//
LOCUS       DADMIB010000141        11034 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.142, whole genome shotgun sequence.
ACCESSION   DADMIB010000141 DADMIB010000000
VERSION     DADMIB010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11034
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.142"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..159
                     /locus_tag="JNZ89_003363"
     CDS             <1..159
                     /locus_tag="JNZ89_003363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8937127.1"
                     /translation="FRCQVCGYTANADVNGARNILAAGHAVLACGEMVQSGRPLKQEP
                     TEMIQATA"
     gene            330..677
                     /locus_tag="JNZ89_003364"
     CDS             330..677
                     /locus_tag="JNZ89_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidH family protein"
                     /protein_id="HAY8937128.1"
                     /translation="MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAP
                     DFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMV
                     VAVIVMGLVLYAG"
     gene            667..1029
                     /locus_tag="JNZ89_003365"
     CDS             667..1029
                     /locus_tag="JNZ89_003365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HAY8937129.1"
                     /translation="MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWH
                     QAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAI
                     LFAVTHIHQLIVFIERVA"
     gene            1026..1523
                     /locus_tag="JNZ89_003366"
     CDS             1026..1523
                     /locus_tag="JNZ89_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HAY8937130.1"
                     /translation="MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLI
                     PYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGGENP
                     QPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
                     MTMLR"
     gene            complement(1531..2715)
                     /gene="emrD"
                     /locus_tag="JNZ89_003367"
     CDS             complement(1531..2715)
                     /gene="emrD"
                     /locus_tag="JNZ89_003367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418129.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HAY8937131.1"
                     /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGA
                     VQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA
                     SAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN
                     WRACYLFLLVLCVGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIG
                     GLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
                     SVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPFLAGT
                     AGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQ
                     PV"
     gene            complement(3134..3223)
                     /gene="tisB"
                     /locus_tag="JNZ89_003368"
     CDS             complement(3134..3223)
                     /gene="tisB"
                     /locus_tag="JNZ89_003368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin TisB"
                     /protein_id="HAY8937132.1"
                     /translation="MSLVDIAILILKLIVAALQLLDAVLKYLK"
     gene            3788..3886
                     /gene="ivbL"
                     /locus_tag="JNZ89_003369"
     CDS             3788..3886
                     /gene="ivbL"
                     /locus_tag="JNZ89_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilvB operon leader peptide IvbL"
                     /protein_id="HAY8937133.1"
                     /translation="MTTSMFNAKLLPTALSAAVVVVRVVVVVGNAP"
     gene            3992..5680
                     /gene="ilvB"
                     /locus_tag="JNZ89_003370"
     CDS             3992..5680
                     /gene="ilvB"
                     /locus_tag="JNZ89_003370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HAY8937134.1"
                     /translation="MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYD
                     ALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDS
                     IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQS
                     GRPGPVWIDIPKDVQTAVFEIETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYL
                     GGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEA
                     DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
                     IPQVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVG
                     QHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMN
                     IQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFG
                     LETCDLNNEADPQAALQDIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE"
     gene            5684..5974
                     /locus_tag="JNZ89_003371"
     CDS             5684..5974
                     /locus_tag="JNZ89_003371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase isozyme 1 small subunit"
                     /protein_id="HAY8937135.1"
                     /translation="MQNTTHNNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
                     QDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ"
     gene            6048..6638
                     /gene="uhpA"
                     /locus_tag="JNZ89_003372"
     CDS             6048..6638
                     /gene="uhpA"
                     /locus_tag="JNZ89_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator UhpA"
                     /protein_id="HAY8937136.1"
                     /translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
                     GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
                     CSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
                     ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW"
     gene            6638..8140
                     /gene="uhpB"
                     /locus_tag="JNZ89_003373"
     CDS             6638..8140
                     /gene="uhpB"
                     /locus_tag="JNZ89_003373"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine-protein
                     kinase/phosphatase UhpB"
                     /protein_id="HAY8937137.1"
                     /translation="MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFP
                     FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR
                     YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH
                     YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP
                     IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL
                     RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
                     ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG
                     IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE
                     DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV"
     gene            8150..9469
                     /gene="uhpC"
                     /locus_tag="JNZ89_003374"
     CDS             8150..9469
                     /gene="uhpC"
                     /locus_tag="JNZ89_003374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418123.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter family glucose-6-phosphate
                     receptor UhpC"
                     /protein_id="HAY8937138.1"
                     /translation="MLPFLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYF
                     TRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
                     IATGIINILFGFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWN
                     TAHNVGGALIPIVMAAAALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVG
                     EWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLY
                     MSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
                     SLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
                     ASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPREA"
     gene            9607..10998
                     /gene="uhpT"
                     /locus_tag="JNZ89_003375"
     CDS             9607..10998
                     /gene="uhpT"
                     /locus_tag="JNZ89_003375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HAY8937139.1"
                     /translation="MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYL
                     IRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
                     ILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
                     LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPE
                     SYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRI
                     GIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIAL
                     ALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
                     TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERK
                     IRREKKIQQLTVA"
BASE COUNT         2424 a         2873 c         3117 g         2620 t
ORIGIN      
        1 ttcagatgcc aggtatgtgg atatacagcg aacgccgatg taaatggcgc tcgtaacatt
       61 ttagcggcgg ggcacgccgt tcttgcctgt ggagagatgg tgcagtcagg ccgcccgttg
      121 aagcaggaac ccaccgaaat gattcaggcg acagcctgaa cgtagcaggg atcctcgtcc
      181 ttcagggcgt ggaggatgtc aatttgcgct atgataccca tctgacctcc ttgtagcgga
      241 tggcaaaagc atatcaggaa acgggcggac gaaattctta aaaaaaaccg ctaaagatag
      301 agcgttagtg aaattgcaaa ggagcaacaa tgaaaatttc ccgccttgga gaagcgcccg
      361 attaccgctt ctcgctggct aatgagcgta cttttctggc gtggatccgt accgcactag
      421 gatttctggc ggcgggggtt gggcttgatc aacttgcgcc agatttcgcc acgcccgtca
      481 ttcgtgaact gctggcgttg ttgttgtgtc tgttttccgg cgggttagca atgtatggct
      541 acctgcgctg gttacgcaat gaaaaagcga tgcgtctgaa agaggacctg ccctacacca
      601 acagcttatt aatcattagc ttaatattga tggtcgtggc ggtgatcgtt atgggactgg
      661 tgttgtatgc cggatagccg caaagccaga cgcattgccg acccaggact gcagccggag
      721 cgcacatcac tggcgtggtt tcgtaccatg ctgggctacg gcgcgttgat ggcgttggct
      781 atcaaacaca actggcacca ggcgggcatg ttattctgga tttcgattgg cattctcgcc
      841 atcgtggcgc tgatcctctg gcactacacc cgtaatcgca atttaatgga tgtcacgaat
      901 agcgattttt cccaatttca cgtagtccgt gacaaatttt tgatctccct cgcggtgtta
      961 tctctcgcaa tactgtttgc tgtaacgcat atacatcaac ttatcgtatt tattgagaga
     1021 gtcgcatgac aggaagtcag gtcattgatg ctgaagagga caggcataaa ctggttgtag
     1081 agtacaagga tgctctgcaa cctgccgatt tttatcacaa tttcaaacag cggggcatcc
     1141 gctccgtaca gctcattccc tatcttgaat ttgatgaccg gggcgatctg acggccgctt
     1201 cggtgacagc agagctgtgg gggaaatttt taattgccct gttcgagtgt tgggtgcggg
     1261 cagatatcag tcgtatctcg attgagcttt ttgacgccac cttacaaaaa tggtgtggcg
     1321 gcgaaaaccc gcaaccgcgc cgtgactgcc aggcgtgcga ctggcatcgc ctgtgcccgc
     1381 acgctcggca ggagacgcca gacagcgtgc tttgtgcggg ctatcaggcg ttttattctt
     1441 actccgcacc gcatatgcgg gtgatgcgtg atctgataaa gcagcatcgt tctcccatgg
     1501 agctgatgac gatgctgcgg tgacgtgcgc ttaaacgggc tgcccctgat gcgacatccg
     1561 cgtcgccagc ggcagccagc acagcacgat caacaatccc attaaggtca tcaataaccc
     1621 caggctaccc tgaccggttt gcggcaacat cgcagagagc gacgccagca cgccggaacc
     1681 aatgttttgc agaccgccga ccagcgcgcc agccgtgccc gccaggaagg ggaacggctc
     1741 catcgcgccg ctggtcgcca gcggaaacag catcccggca ccgaaaaaga acagcgcggc
     1801 gggaacgagc agcgtccaga cattcatcac gccaaaccag tcggggatcc acatcagcaa
     1861 gccagccagc aggcagcaga taaccgactg ccacattaac gtggagaagc gtttattggg
     1921 acgtccggca aaccatgcgc caaaaaacgc tgccggaatc ggcagaataa acaaaatact
     1981 gaccgtcata ctgctcagcc ctaacaccgc gcccatcagc acgccggagc aggcttcaaa
     2041 ggcggcaatc ccggccagac cgccaatcag catcagcaaa taacagttaa aaccgctgtt
     2101 accgaaaagc gttttataac tggtaagcag gcgcgtgcgc ggtgcatcga ccggacgcgt
     2161 ttccggcatc cagcgggcca tactgaaggt cacaccaaca caaagaacca acaaaaagag
     2221 ataacaggcg cgccagttcc acatcgtatc cagcagaccg ccgattagcg gtgcgagcaa
     2281 cggactgacg agaatcccca tgtttaacag gctgttagca tggcgcaact gtgtccgttc
     2341 atataaatct cgcggcaaag tacgcgccat tacgccgcca acgccggtgc ccatcccctg
     2401 catcgcgctg gcggcaatca ataccgtcaa actggaggtc gtgaccgcga ccagcgttgc
     2461 cagcataaaa atggacattc cgacgaggat caccggtcgg cgacccacac ggtcggaaat
     2521 cgggccataa aacagctgtg agacaccgta agtcagcaga taagcgccca ttacgctctg
     2581 caccgcccct tcacggacgt tgagatcgcg cgccatatcg gcaatagctg gaatataaat
     2641 ggtttgcgcc atctgaccga cggccacgag taataccaac atcaataaca aattgacgtt
     2701 tctttgcctt ttcattatca cggatgcttt tataaaaata attagaataa gtcactacgc
     2761 attcccataa atgcgggaga ggaatctatc acattgatga atgttagcca gatatacgcc
     2821 aggaatgggg aattgtttag cggcagaata tgtaaacaaa agcggcaata aatgttgtcg
     2881 ggagggatta cgtgcgaact gtaaccctct ccccaaaggg gcgaggggga aaccaccgtt
     2941 ccctttcaga aaatgagcta aacattgcac gggacggtcc cctcgcccct ttggggagag
     3001 ggctagggtg aggggcacag gcagcgcagg tgcaaacatt ctgctggtag aagaagcccc
     3061 caactccaac ccgcacgcta aatataaaag gggagcggtt acccgctccc ctttggtgcg
     3121 acttgaatct gaattacttc aggtatttca gaacagcatc aagcagttgc agtgctgcaa
     3181 caatgagttt gaggataaga atggcgatat ccaccaggct catacgcgtc tcctgtggtt
     3241 caggagcact gccagctgac gtacctttcc gctgcctgtt gccagctgtt gtgcacgcgg
     3301 tatctcaagg agaaacgttg tgcttgttga cataacacag tgtgctcacg cggggttaag
     3361 gcgctgacgg caccacccgt ttcagccagg acttagtgcg ccgggtaacg atgcggcccc
     3421 cgcataatac attgcgtaca gtgatattat agaagtttac tgtataaata aacagtgata
     3481 tttggacaaa acgcaaactg tgatcgatac tcaactatgc cctaaatacg tcaaaattcg
     3541 tgccgaaatt gcgcgttctg cgcggaacac gtatactttc agtgttgaca taatacagtg
     3601 tgctttgcgg ttaccagctg caggcggctg atgaaacctc gctccggcgg ggttttttgt
     3661 tacctgcaat tcagtacaaa acgtgatcag cccctcaatt ttcccttgct gaaaaatttt
     3721 ccattgtctc ccctgtaaag ctgtgcttgt ataaatattg ttaaacacaa aaccaacaag
     3781 gtccccaatg actacttcca tgttcaacgc aaaactacta ccaactgcgc tatccgccgc
     3841 agtggtcgtc gtgcgtgtgg tggtggtcgt cggcaatgcg ccgtagggac tggaacaaca
     3901 cacgattcca aaaccccgcc ggcgcaaacc gggcggggtt tttcgtttaa gcacctcccg
     3961 gaaagtcggc ccagaagaaa aggactggag catggcaagt tcgggcacaa catcgacgcg
     4021 taagcgcttt accggcgcag aatttatcgt tcatttcctg gaacagcagg gcattaagat
     4081 tgtgacgggc attccgggcg gttctatcct gcctgtttac gatgccttaa gccaaagcac
     4141 gcaaatccgc catattctgg cccgtcatga acagggcgcg ggatttatcg ctcaggggat
     4201 ggcgcgcacc gacggtaaac cggcggtctg tatggcctgt agcggaccgg gtgcgactaa
     4261 cctggtgacc gccattgccg atgcgcggct ggactccatc ccgctgattt gcatcaccgg
     4321 tcaggttccc gcctcgatga tcggcaccga cgccttccag gaagtggaca cctacggcat
     4381 ctctatcccc atcaccaaac acaactatct ggtcagacat atcgaagaac tcccgcaggt
     4441 catgagcgat gccttccgca ttgcgcaatc aggccgccca ggcccggtgt ggatagacat
     4501 tcctaaggat gtgcaaacgg cagtttttga gattgaaaca cagcccgcta tggcagaaaa
     4561 agccgccgcc cccgccttta gtgaagaaag cattcgtgac gcagcggcga tgattaacgc
     4621 tgccaaacgc ccggtgcttt atctgggcgg cggtgtgatc aatgcgcccg cacgggtgcg
     4681 tgaactggcg gagaaagcgc aactgcctac caccatgact ttaatggcgc tgggcatgtt
     4741 gccaaaagcg catccgttgt cgctgggtat gctggggatg cacggcgtgc gcagcaccaa
     4801 ctatattttg caggaggcgg atttgttgat agtgctcggt gcgcgttttg atgaccgggc
     4861 aattggcaaa accgagcagt tctgtccgaa tgccaaaatt attcatgtcg atatcgatcg
     4921 cgcagagctg ggtaaaatca agcagccgca tgtggcgatt caggcggatg ttgatgacgt
     4981 gctggcgcaa ttgatcccgc aggtggaagc gcaaccgcgt gcagagtggc accagttggt
     5041 agcggatttg cagcgcgaat tcccgtgtcc aatcccgaaa gcgtgcgatc cattaagcca
     5101 ttacggcctg atcaacgccg ttgccgcctg tgtcgatgac aatgcgatta tcaccaccga
     5161 tgtgggtcag catcagatgt ggaccgcgca agcttatccg ctcaatcgcc cacgccagtg
     5221 gctgacctcc ggtgggctgg gcacgatggg ttttggcctg cctgcggcga ttggcgcggc
     5281 gctggcgaac ccggatcgca aagtgttgtg tttctccggc gacggcagcc tgatgatgaa
     5341 tattcaggag atggcgaccg ccagtgaaaa tcagctggat gtcaaaatca ttctgatgaa
     5401 caacgaagcg ctggggctgg tgcatcagca acagagtctg ttctacgagc aaggcgtttt
     5461 tgccgccacc tatccgggca aaatcaactt tatgcagatt gccgccggat tcggcctcga
     5521 aacctgtgat ttgaataacg aagccgatcc gcaggctgca ttgcaggata tcatcaatcg
     5581 ccctggcccg gcgctgatcc atgtgcgcat tgatgccgaa gaaaaagttt acccgatggt
     5641 gccgccaggt gcggcgaata ctgaaatggt gggggaataa gccatgcaaa acacaactca
     5701 taacaacgta attctggagc tcaccgttcg caaccatccg ggcgtaatga cccacgtttg
     5761 tggccttttt gcccgccgcg cttttaacgt tgaaggcatt ctttgtctgc cgattcagga
     5821 cagcgacaaa agccatatct ggctactggt caatgacgac cagcgtctgg agcagatgat
     5881 aagccaaatc gataagctgg aagatgttgt gaaagtgcag cgtaatcagt ccgatccgac
     5941 gatgtttaac aagatcgcgg tgttttttca gtaaccgctc aaggcttgaa caacatcgcg
     6001 cttatcgtta aggtaagcgc gtttttttta cccgccagga caagaccatg atcaccgttg
     6061 cccttataga cgatcacctc atcgtccgct ccggctttgc gcagctgctg gggctggaac
     6121 ctgatttgca ggtagttgcc gagtttggtt cggggcgcga ggcgctggcg gggctgccgg
     6181 ggcgcggtgt gcaggtgtgt atttgcgata tctccatgcc cgatatctcc ggtctggagc
     6241 tgctaagcca gctgccgaaa ggtatggcga cgattatgct ctccgttcac gacagtcctg
     6301 cgctggttga gcaggcgctt aacgcggggg cacgcggctt tctttccaaa cgctgtagcc
     6361 cggatgaact cattgctgcg gtgcatacgg ttgccacggg cggctgttat ctgacgccgg
     6421 atattgccat taaactggca tccggtcgtc aggacccgct aaccaaacgt gaacgccagg
     6481 tggcggaaaa actggcgcaa ggaatggcgg tgaaagagat tgccgccgaa ctgggcttgt
     6541 caccgaaaac ggtacacgtc catcgcgcca atctgatgga aaaactgggc gtcagtaacg
     6601 acgtagagct ggcgcgccgc atgtttgatg gctggtgatg aagacgttgt tctcccgctt
     6661 aattaccgtt attgcctgct tttttatctt ctctgccgca tggttttgcc tgtggagtat
     6721 cagcctgcat ctggttgagc gccctgatat ggcggtgctg ttatttccgt ttggtctgcg
     6781 tctggggcta atgctgcaat gcccgcgcgg atactggccg gtgctgctgg gcgcggagtg
     6841 gctgctgatt tactggctaa cgcaggcggt cggtttaacc cattttccgt tattgatgat
     6901 cggtagttta ctgacgttac tgcccgtagc gctgatctcg cgctatcgcc atcagcgtga
     6961 ctggcgcacc ttgctgttac agggggcggc gttaacggcg gcggcgttgt tgcaatcgct
     7021 gccctggctt tggcacggca aagagtcgtg gaatgcgctg ttgctgactt taactggcgg
     7081 cctgacgctg gccccgatat gtctggtgtt ctggcactat ctcgccaata acacctggct
     7141 gccgctcggc ccgtcactgg tttctcagcc aatcaactgg cgcgggcgac atctggtctg
     7201 gtacttgctg ctgtttgtta tcagtctctg gctccagttg ggattgccgg acgaactgtc
     7261 gcgctttacg ccattctgtc tggcgctgcc gattatcgcg ctggcctggc actatggttg
     7321 gcaaggggcg ctgattgcga cgttgatgaa cgccatcgcg ctgatcgcca gtcaaacctg
     7381 gcgcgatcat ccggtggatt tattgctctc gctgctggtg caaagtctga cagggttgtt
     7441 gcttggcgct ggcatccagc ggttgcgtga acttaaccag tcgctgcaaa aggaactggc
     7501 gcgcaatcag catctggctg aacggttgct ggaaaccgaa gagagcgtgc gccgtgatgt
     7561 ggcgcgtgag ctgcatgatg atatcggtca gaccatcact gctattcgta ctcaggcggg
     7621 cattgttcag cggctggcgg cagataacgc cagcgtgaag cagagcgggc agctcatcga
     7681 acaactatcg ctgggcgttt acgacgcggt gcgccgtttg ttgggtcggt tacgtccgcg
     7741 ccagttggat gatctcaccc tggagcaggc catccgctca ctgatgcggg aaatggagct
     7801 ggaagggcgc ggtattgtca gccatctcga atggcgaatc gatgaatcag cgttaagcga
     7861 aaaccagcgc gtgacgctgt ttcgtgtctg ccaggaaggg ctgaacaaca ttgtgaaaca
     7921 tgctgatgcc agcgcggtca ccctgcaagg ctggcagcag gatgaacggt tgatgctggt
     7981 tattgaagac gatggcagcg gtttgccgcc gggttccggg caacaaggtt ttggcctcac
     8041 cggaatgcgc gagcgcgtaa cggcgctggg tggcacatta cacatttcct gtctgcacgg
     8101 cacgcgtgtc agcgtttctc tacctcaacg ctatgtctaa ggtttgatga tgttgccgtt
     8161 tctgaaagcg cctgccgatg cgccattaat gactgataaa tatgaaattg atgcccgcta
     8221 tcgctactgg cgtcggcata ttctgctgac catctggctg ggttacgcgc tgttttactt
     8281 cacgcggaaa agttttaacg ccgccgtacc agaaatcctt gctaacggcg tgctcagccg
     8341 tagcgatatc ggcctgttag cgaccctgtt ttacattacc tatggcgtgt cgaagtttgt
     8401 ctccggcatt gtcagcgatc gctcaaatgc ccgttatttt atggggatag ggcttatcgc
     8461 cacgggcatt atcaacattc tgtttggctt ctcgacgtcg ctatgggcgt ttgccgtact
     8521 ctgggtgctg aacgcctttt tccagggctg gggttcaccg gtgtgtgcgc gtctgttaac
     8581 ggcctggtat tcacgtaccg agcgcggtgg ttggtgggca ttatggaaca cggcgcataa
     8641 cgtcggcggc gcactcattc ccattgtgat ggcagcggct gcactacatt acggctggcg
     8701 tgccgggatg atgattgctg gttgtatggc gatcgtcgtg ggaatttttc tctgctggcg
     8761 gctgcgcgat cgcccgcagg cgttaggttt accggcggtc ggtgaatggc gacacgacgc
     8821 gctggagata gctcaacaac aagaaggggc agggctgacg cgtaaagaga tcctcaccaa
     8881 atatgtgttg ctgaatccgt atatctggct gctttcgttt tgctatgtgc tggtctatgt
     8941 ggtccgggcg gcgatcaacg actggggcaa tttgtatatg tccgagacgc tgggcgtcga
     9001 tctggtcacg gcgaatacgg cagtgacgat gtttgaactg ggtggattta tcggtgcgct
     9061 ggtagcgggt tggggctcgg acaaattgtt taacggcaac cgagggccga tgaatttgat
     9121 tttcgccgcc ggaattttgc tttcagtcgg ctccctgtgg ctgatgccat ttgccagcta
     9181 cgtgatgcag gcaacctgct tcttcaccat tggttttttt gtctttggcc cacagatgtt
     9241 aatcggtatg gcggcggcag agtgttccca caaagaggcg gcaggggcgg cgacggggtt
     9301 tgtcggcttg tttgcttatc tgggggcgtc gcttgctggt tggccgctgg cgaaagtact
     9361 cgatacctgg cactggagcg gattttttgt ggttatctct atcgccgccg ggatttccgc
     9421 actgctgtta ctgccctttt tgaacgccca gacaccgcgc gaagcgtgat gcatctcacc
     9481 ttttcacttc atatccggca aaactaagaa attttccagg ttttgcctgg acgctatctc
     9541 aggcctgatt tgctgctgat ttttacaatg catgcctcac gcaggtattc atttcaggag
     9601 taacccatgc tggctttcct aaaccaggtt cgcaagccga ccctggacct tccgctcgaa
     9661 gtgcggcgca aaatgtggtt caaaccgttc atgcaatcct acctggtggt ctttatcggc
     9721 tacctgacga tgtacctgat tcgcaagaac tttaacatcg cgcagaacga tatgatttcg
     9781 acctacgggt tgagcatgac gcagctgggg atgatcggcc tgggtttctc catcacttat
     9841 ggcgtgggta aaacgttggt ttcatactac gccgacggca aaaacaccaa acaattcctg
     9901 ccgttcatgc tgatcctgtc tgccatttgt atgctgggct tcagtgccag tatgggcagc
     9961 ggctcggtta gcctgttcct gatgattgcc ttctacgcct taagcggctt tttccagagt
    10021 accggcggtt cgtgcagtta ctccaccatc accaaatgga cgccgcgtcg taaacgcggg
    10081 acattcctcg gtttctggaa tatttctcac aaccttggcg gtgcaggcgc agcaggtgtg
    10141 gcgctgttcg gggcaaatta cctgttcgat ggccatgtca tcggcatgtt tatcttcccg
    10201 tcgattatcg cgctgattgt cggttttatc ggcctgcgtt acggcagcga ctccccagaa
    10261 tcttatggcc tcggcaaagc tgaagaactg ttcggcgagg agatcagcga agaggacaaa
    10321 gagacagaat ctaccgatat gaccaagtgg cagatctttg ttgagtatgt gctgaaaaac
    10381 aaagtgatct ggctgctgtg cttcgccaac attttcctct atgtggtacg tattggtatc
    10441 gaccagtggt caaccgtata cgcgttccag gaactgaaac tctctaaagc ggtggcgatt
    10501 cagggcttta cgctgtttga agctggtgcg ctggtcggta cgctgctgtg gggctggctc
    10561 tctgacctgg cgaacggtcg ccgtggcctg gtggcctgca tcgcgctggc gctgattatc
    10621 gccacgctcg gtgtgtatca acatgccagc aacgaatata tctatctggc ttctctcttt
    10681 gcgttgggtt tcctggtctt tggcccgcaa ttgttgattg gtgtggctgc tgttggcttt
    10741 gtacctaaaa aagcgattgg cgctgccgat ggtattaaag gcacctttgc ttacctgatt
    10801 ggtgacagct ttgccaagtt aggtctggga atgattgccg atgggacgcc ggtattcggc
    10861 cttaccggct gggcaggcac cttcgccgca cttgatatcg ccgcgattgg ttgtatctgc
    10921 ctgatggcga tagtggcggt gatggaagaa cgcaaaatcc gccgcgagaa aaaaattcag
    10981 cagttgacag tggcataaac gtaactggtg acttttgccc ggcatgacgc cggg
//
LOCUS       DADMIB010000142        10989 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.143, whole genome shotgun sequence.
ACCESSION   DADMIB010000142 DADMIB010000000
VERSION     DADMIB010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10989
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.143"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            28..1347
                     /gene="potE"
                     /locus_tag="JNZ89_003376"
     CDS             28..1347
                     /gene="potE"
                     /locus_tag="JNZ89_003376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine-ornithine antiporter"
                     /protein_id="HAY8937140.1"
                     /translation="MSQAKSNKMGVVQLTILTMVNMMGSGIIMLPTKLAEVGTISIIS
                     WLVTAVGSMALAWAFAKCGMFSRKSGGMGGYAEYAFGKSGNFMANYTYGVSLLIANVA
                     IAISAVGYGTELLGASLSPVQIGLATIGVLWICTVANFGGARITGQISSITVWGVIIP
                     VVGLCIIGWFWFSPTLYANSWNPHHVPFFSAVGSSIAMTLWAFLGLESACANAEVVEN
                     PERNVPIAVLGGTLGAAVIYIVSTNVIAGIVPNMELANSTAPFGLAFAQMFTPEVGKV
                     IMALMVMSCCGSLLGWQFTIAQVFKSSSDEGYFPKIFSRVTKVDAPVQGMLTIVIIQS
                     GLALMTISPSLNSQFNVLVNLAVVTNIIPYILSMAALVIIQKVANVPPSKAKVANFVA
                     FVGAMYSFYALYSSGEEAMLYGSIVTFLGWTLYGLVSPCFELKNKHG"
     gene            1375..1572
                     /locus_tag="JNZ89_003377"
                     /pseudo
     CDS             1375..1572
                     /locus_tag="JNZ89_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001405579.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1696..2346
                     /locus_tag="JNZ89_003378"
     CDS             1696..2346
                     /locus_tag="JNZ89_003378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 domain-containing protein"
                     /protein_id="HAY8937141.1"
                     /translation="MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKNLAETALY
                     QLQVTTKSPMGALVYGSGGLLIDNGWLRIAGSGHPRLPRDPVSWTQRPEFAGVRALPI
                     ADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYEN
                     VRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ"
     gene            complement(2387..2881)
                     /locus_tag="JNZ89_003379"
     CDS             complement(2387..2881)
                     /locus_tag="JNZ89_003379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937142.1"
                     /translation="MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTR
                     RLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPG
                     WQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
                     INTH"
     gene            complement(3096..4736)
                     /gene="pgm"
                     /locus_tag="JNZ89_003380"
     CDS             complement(3096..4736)
                     /gene="pgm"
                     /locus_tag="JNZ89_003380"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HAY8937143.1"
                     /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
                     SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
                     AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
                     NGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI
                     VDMEAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA
                     IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
                     HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
                     AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA
                     AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
                     SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
     gene            complement(4762..5307)
                     /gene="seqA"
                     /locus_tag="JNZ89_003381"
     CDS             complement(4762..5307)
                     /gene="seqA"
                     /locus_tag="JNZ89_003381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HAY8937144.1"
                     /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP
                     VTKEVRVASPAIVEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD
                     AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI
                     EHIMQSMQFPAELIEKVCGTI"
     gene            5492..6256
                     /gene="ybfF"
                     /locus_tag="JNZ89_003382"
     CDS             5492..6256
                     /gene="ybfF"
                     /locus_tag="JNZ89_003382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY8937145.1"
                     /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN
                     IIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA
                     RDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ
                     FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPSGNSPYVSEQYRDDLL
                     AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND"
     gene            6327..6689
                     /gene="ybfE"
                     /locus_tag="JNZ89_003383"
     CDS             6327..6689
                     /gene="ybfE"
                     /locus_tag="JNZ89_003383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HAY8937146.1"
                     /translation="MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPG
                     RPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSEL
                     IEEMLMQQLAALRSQGIV"
     gene            6829..7359
                     /gene="fldA"
                     /locus_tag="JNZ89_003384"
     CDS             6829..7359
                     /gene="fldA"
                     /locus_tag="JNZ89_003384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HAY8937147.1"
                     /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
                     EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
                     GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
                     VKQISEELHLDEILNA"
     gene            7569..7655
                     /gene="uof"
                     /locus_tag="JNZ89_003385"
     CDS             7569..7655
                     /gene="uof"
                     /locus_tag="JNZ89_003385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001491546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fur leader peptide"
                     /protein_id="HAY8937148.1"
                     /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD"
     gene            7648..8094
                     /gene="fur"
                     /locus_tag="JNZ89_003386"
     CDS             7648..8094
                     /gene="fur"
                     /locus_tag="JNZ89_003386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HAY8937149.1"
                     /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
                     DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
                     SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK"
     gene            complement(8179..8505)
                     /locus_tag="JNZ89_003387"
     CDS             complement(8179..8505)
                     /locus_tag="JNZ89_003387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937150.1"
                     /translation="MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP
                     EKIEACQSVLNVLKKEKQHQHFPDQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE
                     IRSNNK"
     gene            complement(8555..9961)
                     /gene="chiP"
                     /locus_tag="JNZ89_003388"
     CDS             complement(8555..9961)
                     /gene="chiP"
                     /locus_tag="JNZ89_003388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitoporin"
                     /protein_id="HAY8937151.1"
                     /translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG
                     IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAVFTAIEMAEN
                     GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
                     APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV
                     DYLHSLGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD
                     KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPAYAS
                     SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATWQS
                     NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI
                     FQDERDVKFMVIAPFTIF"
     gene            complement(10408..>10989)
                     /locus_tag="JNZ89_003389"
     CDS             complement(10408..>10989)
                     /locus_tag="JNZ89_003389"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="catalyzes a two-step reaction, first charging a
                     glutamine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HAY8937152.1"
                     /translation="EMVTMPNHPNKPEMGSRQVPFSSEIWIDRADFREEANKQYKRLV
                     LGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAA
                     HALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFER
                     EGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE"
BASE COUNT         2696 a         2693 c         2724 g         2876 t
ORIGIN      
        1 aagcaccctg ttgaaagggg aaaaattatg agtcaggcta aatcgaacaa aatgggcgtc
       61 gttcagttaa ccatactgac gatggtcaac atgatgggct ccggtatcat catgctgccg
      121 acaaagcttg ccgaagttgg gacaatctca attatctcct ggctggtgac agccgtaggc
      181 tcaatggcac tggcatgggc attcgcaaaa tgcggtatgt tcagccgtaa atcaggcggt
      241 atgggcggtt atgcggagta tgctttcggt aagtccggca attttatggc gaactacacc
      301 tacggtgtct cgctgctgat tgctaacgtc gcgattgcta tttcggcggt tggttacggc
      361 accgaactgc tcggcgcgag tttgtcgcca gtgcagattg gtcttgcgac catcggagtg
      421 ctgtggattt gtaccgtggc taactttggt ggtgcgcgca ttaccgggca aatcagtagc
      481 attactgtgt ggggagtcat tattccggtc gtcggtctgt gcattattgg ctggttctgg
      541 tttagtccga cgctgtacgc taactcatgg aacccgcacc atgtgccgtt ctttagcgct
      601 gtaggttctt ccatcgccat gacgttgtgg gctttcctcg gtctggagtc agcctgtgcc
      661 aacgccgaag tagtggaaaa cccggaacgt aacgtgccga ttgcagttct tggcggtact
      721 ttaggtgcgg cggtgattta tatcgtctcc accaacgtga ttgccgggat tgtgcctaat
      781 atggagctgg caaattcaac ggcaccattt ggcctggctt tcgcacagat gttcacacca
      841 gaagtgggta aagtcattat ggcgctgatg gtgatgtcct gctgcggttc actgcttggc
      901 tggcagttca ccattgccca ggtgtttaaa tcttcatctg atgaaggcta cttccctaaa
      961 attttctccc gtgtaaccaa agtggatgca ccggtgcagg gaatgttgac cattgtgatt
     1021 attcagagtg gattggcact gatgaccatt agcccgtcac tgaacagcca gttcaacgtg
     1081 ctggttaacc tggccgtggt gaccaatatc attccgtata ttctgtcaat ggcggcatta
     1141 gtcattattc agaaggtcgc taatgtgccc ccctcaaaag cgaaagtagc aaactttgtt
     1201 gcctttgttg gtgcgatgta cagtttctat gcgctgtact catccgggga agaagccatg
     1261 ctgtacggtt ctatcgtgac cttccttggt tggacactgt atggtctggt atcaccatgc
     1321 tttgaactga aaaataaaca cggttaataa aacaaagtaa aaaagggcga ttgaatgatc
     1381 gccctttctg tttgttggca aatagttcgt tatttatgcc gcatccggca gatgtagggt
     1441 ctaaacgcga tcgaacacag caactatttg cgtaattata tggggcatct gcgacaaaaa
     1501 ctggaacagg atccggcccg gcctcgccat tttattactg aaaccggtat tgggtatcgg
     1561 tttatgcttt gaaaaaagtg gcaatgtatg gataaagtca ttttttattc aaatataagg
     1621 aacttaatat ttaaaaaatg ttccatacaa ttcctcatca taaatgacac cgtagcacac
     1681 aaggagcaag tagcgatgcg tgaaatgaat cagttagtaa atactgaaga ttcagcctgg
     1741 ccaataatcc agaactggtt aaaagacgcc acaaaccata ccgaactctt accggttaat
     1801 aaaaatttag ccgaaaccgc actttatcaa ttacaggtga caacaaaatc accgatgggt
     1861 gcgcttgtct atggctccgg aggtctgctg attgataatg gttggttacg catagcagga
     1921 tctggtcacc cccggttgcc acgagatcca gtaagttgga cacaacgccc tgaattcgca
     1981 ggcgtgcggg ctttacccat cgctgacgat gtcgcagggg gaatttttgc tcttaatggt
     2041 ggcgatcttg gggaagatac tggctgcgtt tattattttg cgccagatac gctgaattgg
     2101 gaaagtctgg aagttggata ttctgagttt cttcagtggg cattatccgg tgatttagat
     2161 accttctatg aaaatgtacg atggcagcaa tggcgagaag acgtaataaa attatcggca
     2221 acggaagcct tcacgttcta ccctttctta tgggtacaaa gtgaagaagc aagaacaaga
     2281 aaagttattt cgcttactga actctgggaa atgcagtatc aaatgaaaga aacattcacg
     2341 caataagaca tgttcaggtc cgggtttcat tcccggactc actattttaa tgtgtattta
     2401 tcgctttcaa ttcttgctgg caattttctg actggcagcg tcgtaactca ataatcccga
     2461 catgcatcat cgagccaaaa aatccgcttt cgctgacata atcctcattg actatcggtc
     2521 gagtgccggg cttgccctgg caaacccgca taaaaaatga ggtgtagcat tgccaaccgg
     2581 gatttaaacc gaccttttct tgtgctgaca tattatgaag ataagtaagt tctttttcgt
     2641 tcccgcctga caactgccag cggcgggtat tatcaggtaa gttatcacca cggcaatttg
     2701 tcttacaccg ggaaggtgca atatttaccg caatgctacc cgttaatctt ctggttttat
     2761 ctttaggggt cagtaaccag tcgccagcta atgatgattg ttcaggttgg gcgcatgcag
     2821 tcagcagtaa tgtggcggta attagtgaca ctatgacgac cagactcctg ttggtcttca
     2881 ttgggatttc cttgagctac tcagtttgtt gacaaagtgt tcgttgtttt tgccggatgc
     2941 ggcgtgaacg ccttatccgg cctacaaaat ctcgtaaatt caatatattg caccatcctc
     3001 gtaggcctga taagcgtagc gcatcaggca attctgtgtt tgtcatacgt aaaaaagggc
     3061 gatcttccga ccgccctttt tcttatttaa tgtgtttacg cgtttttcag aacttcgcta
     3121 acaatctcaa ccgcttcttt ctcaatctgc ttgcgatgtt cttcaccgag gaagctttcg
     3181 cagtagatct tatatgcgtc ttccgtgcct gacggacgcg cggcgaacca gccgttgtca
     3241 gtcatcactt tcagaccgcc gatagaagca ccattgcccg gtgccgccgt caggcgcgcg
     3301 gtgatcgggt cgcctgccag ggtgctggcg ctcaccattt ccggagacag cttagacagc
     3361 gccgcttttt gtgcggaagt cgcagctgcc tgcaaacggt tgtagctcgg cgcaccaaag
     3421 cgttttgcca gttcgttgta gtgttcctgc gggttcttac cggtgacagc ggtgatttcc
     3481 gccgccagca gacacatgat gatgccgtct ttgtcggtgg accacggcgt gccgtcgaaa
     3541 cgcaggaagg aagcccctgc gctctcttcg ccgccaaagc cgaagctgcc gtcgaacaga
     3601 ccatcaacaa accatttgaa acctaccggg acttctacca gcttgcggcc caagtcattg
     3661 accacacggt cgatcatcgc agaagaaacc agcgttttac cgacagcaac atctttgccc
     3721 cactgcggac gatgctggaa caggtagttg atcgccaccg ccaggtagtg gttcggattc
     3781 atcaaacctg ccggagtgac gataccgtga cggtcataat ccgggtcgtt agcaaacgcc
     3841 agatcgaact tatcacgcag tgccagcagg cccgccatcg cacactcgga ggagcagtcc
     3901 atacggatcg cgccgtcttt atcaaggtgc ataaagcgga aggtttgatc gacctgatcg
     3961 ttaacgatgg tcaggttgag gttgtaatac tcgccaatac gcttccagta ttcgataccg
     4021 gaaccgccca gcggatcaac gcccagcgtc aggcccgctt tctgaatcgc ctccatatca
     4081 acgatatcgg ccagaccttc cacaaacggc tgcaccagat cctgctcttt cacatgaccg
     4141 gatgccatcg cttcgtcgag ggagatacgc ttcacgcctt tcaggccatc ggccagcagt
     4201 gcgttggccc tgtcttccac cactttggtg acgttggtat cagccgggcc accatttggc
     4261 ggattgtact tgataccacc atcttccggc gggttatggg acggtgtaat cacgataccg
     4321 tctgccagcg gaccaccttt tttattgtga accaggatgg cattggaaac ggcaggcgtt
     4381 ggagtgaagc cattgttttc ctgcacaatg acatcaacgc cgttcgctgc cagcacttcc
     4441 agtacggaaa tgaacgcagg ctcggacagg gcgtgagtat ctttacccac atagcaaggg
     4501 ccagtgatgc cgtttttcgc acgttcttca gcaattgcct gagcgatcgc cagaatgtgc
     4561 ggctcgttaa agctgtggcg cgctgcactg ccacggtgac cggaagtacc gaatttcacc
     4621 gcgtgctccg cattccctgc ttctggtttc agtacataat attgcgccgt cagttgggcg
     4681 acgttaatca aatcactctg ttgtgcaggt tggcctgcac gattgtggat tgccattgct
     4741 ttgtcctttg tctgcaacgt tttagatagt tccgcaaacc ttctcaatca attccgccgg
     4801 gaattgcatc gactgcatga tgtgttcgat catgctgcat ttacggccgg tgttggtgtt
     4861 ggtgatcacc caatacggcg tgcctggcac atgtttcggc ttggtctgat taccattttt
     4921 cagcagcgtt tgttcatctg ccgcaaagta aacgcgtgta cgaccgtgca acgattccgt
     4981 tgcttcggca aacgcctggg cgtcaagaga atatagtgta gacaacagca gcataaagcg
     5041 attgaccgct cgcttttgct ctgcgtattc gtcagaaagc agaagttcac gcattgcgcg
     5101 aaccttgtct ttaatcgttt tgaccggctt cgcttcgacg atagcaggtg acgcaacgcg
     5161 aacctctttc gtcaccggag cagcaggctg tgatgcggcg gaaaatttca acatacgccg
     5221 taaaatgtcg gatgcgctct cgccgatatg cttagtgtgg ctggcaatat agctgtagag
     5281 ttcatcatca acttcaatcg ttttcatctt aatccagtgc agtgtcttag ctgaatacaa
     5341 gtcgccaaga gtatatgaat aaatcccggc agcggatagc gtcaagcctg gcttgcagaa
     5401 aaactcggaa taaaccttat ttgttgcagc cctgtggcac aatggtcaac ataataccct
     5461 aacccgacaa cgcgaaaaaa agaactttgc catgaaattg aatatccgcg cgcaaactgc
     5521 acaaaaccag cacaataatt ctcccatcgt tcttgtccat ggtctgtttg gtagcctcga
     5581 caaccttggc gtactggctc gcgatctggt aaacgatcac aatatcatcc aggttgatat
     5641 gcgtaaccac ggtctttcac cgagagatcc ggtaatgaat tacccggcga tggcgcagga
     5701 tcttgttgat actctggatg cacagcagat cgacaaagca acatttatcg gtcactccat
     5761 gggcggtaaa gcggtaatgg cacttacggc actggcccgc gatcgcatcg ataaactggt
     5821 ggcgatcgat atcgcaccgg tcgactatca cgtacgccgt catgatgaga ttttcgcggc
     5881 tatcaacgcg gtcagtgaat cggacgcaca aactcgccag caagcagcag caataatgcg
     5941 ccagcatctt aatgaagaag gggtgattca gtttctgttg aaatcttttg ttgacgggga
     6001 gtggcgcttt aacgtgccgg tattgtggga tcagtatccg catattgtgg gttgggagaa
     6061 aatcccggca tgggatcacc ctgccctgtt tatccctagc ggcaattctc cgtatgttag
     6121 cgagcagtac cgtgatgatt tactggcaca atttccacag gcacgggcgc atgtgattgc
     6181 aggcgcgggt cactgggtcc atgctgaaaa accggatgcg gtattacgcg ctatccgtcg
     6241 ctatctcaat gattaacgca actgattaaa aacccagcgt ccgcgtcgct ttccgcgcgt
     6301 gggcgttggc gtgactcatc gcgctgatgt attatggcgc gctatccatc cgggcagagg
     6361 cctggctgat tgtttccccc gaagtcacca agatcatggc caaagaacaa acggaccgta
     6421 cgacattaga tctgttcgcg cacgagcgtc gaccgggacg accgaaaact aatccgcttt
     6481 cgcgcgatga acagctgcgt attaataaac gcaaccagct aaaacgcgac aaagtacgtg
     6541 gccttaagcg tgtcgaactg aagctgaacg cggaagctgt cgaggcgctg aacgagctgg
     6601 cggagtcgcg caatatgagc cgtagcgaac tgatcgaaga gatgttaatg cagcaactgg
     6661 cggcgctgcg tagtcagggc atcgtttaaa tttccacttt catgtagcac agtgtgcagt
     6721 cctgctcgtt tgctgattcc gaaagactgc ctgttctgct atgattgcct ttatccgtgg
     6781 gcaattttcc acccccattt caataagttt caagaggtta tttcactcat ggctatcact
     6841 ggcatctttt tcggcagcga caccggtaat accgaaaata tcgcaaaaat gattcaaaaa
     6901 cagcttggta aagacgttgc cgatgtccat gacattgcaa aaagcagcaa agaagatctg
     6961 gaagcttatg acattctgct gctgggcatc ccaacctggt attatggcga agcgcagtgt
     7021 gactgggatg acttcttccc gactctcgaa gagattgatt tcaacggcaa actggttgcg
     7081 ctgtttggtt gtggtgacca ggaagattac gccgaatatt tctgcgacgc attgggcacc
     7141 atccgcgaca tcattgaacc gcgcggtgca acgatcgttg gtcactggcc aactgcgggc
     7201 tatcatttcg aagcatcaaa aggtctggct gatgacgacc actttgtcgg tctggctatc
     7261 gacgaagacc gtcagccgga actgaccgct gaacgtgtag aaaaatgggt taaacagatt
     7321 tctgaagagt tgcatctcga cgaaattctc aatgcctgat gtgatgcggc gtagactcat
     7381 gtctacgccg tattaataga taatgccaat caaaataatt gctacaaatt tgtaactttt
     7441 gctgttgtac ctgtacaatg tcccggtgtt caagtggcct tgccgttgta aatgtaagct
     7501 gtgccacgtt tttattaaca atatttgcca gggacttgtg gttttcattt aggcgtggca
     7561 attctataat gatacgcatt atctcaagag caaattctgt cacttcttct aatgaagtga
     7621 accgcttagt aacaggacag attccgcatg actgataaca ataccgccct aaagaaagct
     7681 ggcctgaaag taacgcttcc tcgtttaaaa atcctggaag ttcttcagga gccggacaac
     7741 catcacgtca gtgcggaaga tttatacaaa cgtctgatcg atatgggtga agaaattggt
     7801 ctggctacgg tatatcgcgt actgaaccag tttgacgacg ctggtatcgt cacccgccac
     7861 aattttgaag gcggtaaatc cgtatttgaa ctgacacagc aacatcacca cgatcacctg
     7921 atctgcctcg actgcggcaa ggttatcgaa tttagtgatg attccatcga agcgcgtcag
     7981 cgtgaaattg ccgcaaaaca tggcattcgc ctgactaacc acagtctcta tctttacggt
     8041 cactgtgccg aaggcgattg ccgcgaagat gaacatgcgc acgaaggcaa ataagccagc
     8101 ctgaatgaga aaaagccaac ctgcgggttg gcttttttat gcaagggaaa taagaaaagc
     8161 gagagttaca gctctcactt atttgttatt actgcgaatt tcctgccaaa ctttatcaca
     8221 atcggctttc accgcctgat catttccggt ttgcgttgca cgcagacact gctgataatc
     8281 cagtacgcgg acactttcct ggtcgggaaa atgctgatgt tgtttctctt tcttcagcac
     8341 gtttaacacg ctctggcagg cttcaatttt ttctggcgaa ccttgtgcgg tgttgataca
     8401 ggcgctgtat gcctctttca gacgactgtc ttcctgtggc gcggttgatt gcgcacaagc
     8461 taccagcccc gatgccatta tggcgatgag aatcagtttt ttcatagcaa attcctcaaa
     8521 cgtgcggcag gcacaaaacc tgccgcgtcg ggcatcagaa gatggtgaat ggtgcgatta
     8581 ccataaattt cacgtcacgc tcatcctgga agatgttgcc gtaaccaccg ccccagcttg
     8641 ggatgtcgga gtggttgtcg tattcggtga agtgcagttt gaacatcgtg cctttggcgc
     8701 gaccgtcctg aatggtgtag accgcatcca ggctgtatgc agactcttca atagtccggt
     8761 ttttgtcgta gtacgcatcc ggattgctct gccaggtcgc aggtttagca tcccatgcgt
     8821 aaacgtagga agcgccgatg gcgaagcctg gaagattcca gtttttcagg tcatacatcg
     8881 caccgaagaa gaccgctttt tcgccgttag cgttgaagtc ggaacggtta tcccaccaga
     8941 tatccaggcg gccgttggag gaagcgtagg ctggagtcat acgttgcagg aagtatccct
     9001 gctgaccgtc agccttaacc caggtgcctt cgaggcgcaa atccactacg tcagccgccc
     9061 ggtaaccaaa ggtcaacgct tgcagccagg cggtgccgtc ataaaggtcg ttgacgctgc
     9121 gatcgtcaac tttatcgcgc gtaccataga actggtagct ggtggttaac gggctaccgg
     9181 cgatatcaaa tttgtagctg gctttggcaa aatattgatc gatataccct tccgcctgac
     9241 caaatgccgc ttccagtacg aagttatttt tgaagtcgta tttcgcccca agggagtgca
     9301 gataatcaac tttggtggtt ttatcgttct gataaaactc atccatttcc agatgccacg
     9361 gcgctttgta ttcgttggtc cacatgtagg agaaactcaa cgcaccagca tcgccgtaat
     9421 caaaattcgc cccggcttcc gccccctgat aagtacctgg cataaagctc cagtgcggcg
     9481 ctaacagcgt ttgaccagtt ggctgaatgt aacctgccct cgcccaaacc ggaccgtatt
     9541 taaatttggc cgcagcttta tacaggctta taccgctttt gtcgccagac cagtcttcgt
     9601 cataggcttt attacttttt gaaaacgcga tttcgttcgg gtgggagctg tcgccgtttt
     9661 ccgccatttc aatcgccgta aacacagcaa tatcaaggcc gaacatatca gcagcataac
     9721 cggactgaaa atcgaggttg gcattccagg tggagtgaga aaggttggtt ttgtatttgt
     9781 cgccgtcggt aacatcttta cggtcgcgtt cacgctgcca gtaatatata ccgccggtta
     9841 aggttgaatc gtcgatgaat ccttcggcgc gagcctccgg cattgccata aagcccgaca
     9901 ttgctgtaac accggcgata gccagcgcca gcgtactacg tttgccacta aacgtacgca
     9961 tgggttaatc ctctttgacg tataaattgc tgcaccaaag gtgaacagcg aaaaaaataa
    10021 aaattaaaaa agtagcattg agaaaagtct cgctgactac aggaatagac tatttttcgc
    10081 gacgcgaatt atcaatctct ttctgtaacc agaatgtaag aacatgagca accgcacata
    10141 ttttgatgat ttttgttaca aggcttaagt ttgcggttga aaggcttgca gaagaataaa
    10201 agcgtaaatt tccagcaaga tgaaagcggt tacattttat ttaattatgg tttgtgattt
    10261 taaatttatt ttatggataa attgcgaagc ggaattaatt cgcgaagaaa agcagaaaaa
    10321 acgccgcaga gtgcggcgtt tgggattgtt tgctatttct tgccggatgc gacgtaaatg
    10381 cctcacccgg cctggtagaa cttaaaatta ctcgcctact ttcgcccagg tatcacgcag
    10441 cccaacggtg cggttaaata ccggtttttc cgctgtggaa tggcggctgt cgaggcagaa
    10501 gtaaccttca cgctcaaact ggaatgcttt acccgcaacc gcatctttca gcgacggttc
    10561 agcaaagccc tgtttgatca ccagcgattc cgggttaatc accgacagga aatcatccgc
    10621 agcacctggg ttaggcacgc tgaacagacg gtcgtacaga cggatttcaa ccggcagcgc
    10681 atgtgccgcg ctcacccagt gaataacacc tttgacttta cgaccatctg ccggatcttt
    10741 gcttaaggtg tcggcgtcat aagtacagaa gatggtggtg atattgcctt cggcatcttt
    10801 ctccacgcgt tctgccttaa tgacgtaagc attacgcaga cgcacttctt tacccagcac
    10861 cagacgtttg tactgcttgt tagcttcttc gcggaaatcg gcgcgatcga tccaaatctc
    10921 actgctaaac ggcacctggc ggctacccat ttccggtttg ttcggatggt tcggcatggt
    10981 aaccatttc
//
LOCUS       DADMIB010000143        10902 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.144, whole genome shotgun sequence.
ACCESSION   DADMIB010000143 DADMIB010000000
VERSION     DADMIB010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10902)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10902)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10902
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.144"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            14..184
                     /locus_tag="JNZ89_003390"
     CDS             14..184
                     /locus_tag="JNZ89_003390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001429095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lycopene biosynthesis protein"
                     /protein_id="HAY8937153.1"
                     /translation="MLQEKEYPITIYNIAPFNKNLWSLLKSSQECPPGESKITNKCLH
                     NSCIIKICSICY"
     gene            complement(252..1502)
                     /gene="icd"
                     /locus_tag="JNZ89_003391"
     CDS             complement(252..1502)
                     /gene="icd"
                     /locus_tag="JNZ89_003391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000444467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HAY8937154.1"
                     /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA
                     MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP
                     LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
                     AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
                     ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV
                     IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
                     FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD
                     FERLMEGAKLLKCSEFGEAIIENM"
     gene            1674..2327
                     /gene="rluE"
                     /locus_tag="JNZ89_003392"
     CDS             1674..2327
                     /gene="rluE"
                     /locus_tag="JNZ89_003392"
                     /EC_number="5.4.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309634.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2457) synthase RluE"
                     /protein_id="HAY8937155.1"
                     /translation="MRQFIISENTMQKTSFRNHLVKRFSSQRSTRRKPENQPTRVILF
                     NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG
                     KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER
                     KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYTLDNLANGEWREATE"
     gene            2337..2798
                     /gene="nudJ"
                     /locus_tag="JNZ89_003393"
     CDS             2337..2798
                     /gene="nudJ"
                     /locus_tag="JNZ89_003393"
                     /EC_number="3.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase NudJ"
                     /protein_id="HAY8937156.1"
                     /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL
                     VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID
                     CCRWVSAEEILKASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI"
     gene            2852..3958
                     /gene="mnmA"
                     /locus_tag="JNZ89_003394"
     CDS             2852..3958
                     /gene="mnmA"
                     /locus_tag="JNZ89_003394"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HAY8937157.1"
                     /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD
                     GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC
                     NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH
                     EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP
                     GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG
                     HEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFD
                     EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV"
     gene            3994..4635
                     /gene="hflD"
                     /locus_tag="JNZ89_003395"
     CDS             3994..4635
                     /gene="hflD"
                     /locus_tag="JNZ89_003395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HAY8937158.1"
                     /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII
                     DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA
                     KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS
                     PQVPAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL"
     gene            4639..6009
                     /gene="purB"
                     /locus_tag="JNZ89_003396"
     CDS             4639..6009
                     /gene="purB"
                     /locus_tag="JNZ89_003396"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HAY8937159.1"
                     /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
                     QKLAAHAAIKEVPAFAADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKE
                     KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ
                     YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI
                     AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW
                     GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ
                     RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT
                     MVDELK"
     gene            6177..6848
                     /gene="phoP"
                     /locus_tag="JNZ89_003397"
     CDS             6177..6848
                     /gene="phoP"
                     /locus_tag="JNZ89_003397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PhoP"
                     /protein_id="HAY8937160.1"
                     /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHL
                     PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP
                     FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET
                     LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY
                     LFELR"
     gene            6848..8308
                     /gene="phoQ"
                     /locus_tag="JNZ89_003398"
     CDS             6848..8308
                     /gene="phoQ"
                     /locus_tag="JNZ89_003398"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PhoQ"
                     /protein_id="HAY8937161.1"
                     /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF
                     DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV
                     PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA
                     VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL
                     RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT
                     HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS
                     RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK
                     YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
                     EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE"
     gene            8384..9505
                     /locus_tag="JNZ89_003399"
     CDS             8384..9505
                     /locus_tag="JNZ89_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309600.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HAY8937162.1"
                     /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA
                     MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE
                     LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL
                     QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV
                     LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR
                     HELDIAPPEPPYQPDEIYDALKQGDVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD
                     ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
     gene            complement(9554..10780)
                     /gene="pepT"
                     /locus_tag="JNZ89_003400"
     CDS             complement(9554..10780)
                     /gene="pepT"
                     /locus_tag="JNZ89_003400"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HAY8937163.1"
                     /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE
                     MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD
                     IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNI
                     PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV
                     GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLAGMKGTVERADMH
                     YIIRDFDRKQFEARKCKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
                     IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
                     AVQVIVRIAELTAQRK"
BASE COUNT         2695 a         2787 c         2727 g         2693 t
ORIGIN      
        1 taagcttggt attatccttc aggaaaaaga atatcctatt actatttata acattgcacc
       61 attcaacaag aatttatgga gtttactcaa aagcagtcaa gagtgtcctc caggagaaag
      121 caaaataaca aataaatgtt tacataatag ttgcattata aaaatatgct cgatatgcta
      181 ttaataatat ccacataaat aaaacaacgg gcgtgttata cgcccgtttc aatatttaac
      241 tcatggagag attacatgtt ttcgatgatc gcttcaccaa actctgaaca tttcagcagc
      301 ttagcgcctt ccatcagacg ttcaaagtca taagttacgg ttttcgcgtt gatagcacct
      361 tccatacctt taacaattaa atcagccgct tcagtccacc ccatatggcg cagcatcatc
      421 tcagcggaga ggatgataga gcctggattt actttgtcct gaccggcgta tttcggcgca
      481 gtaccgtggg tggcttcaaa cagggcgcat tcgtcaccga tgtttgctcc aggagcgata
      541 ccgataccgc caacctgcgc tgccagggcg tcagaaatgt agtcaccgtt caggttcata
      601 caggcgataa catcatattc agccggacgc agcaggatct gttgcaggaa tgcatcagca
      661 atcacgtctt taatgacgat ctctttgccg gtgttcgggt ttttaacttt cagccacggg
      721 ccgccgtcga tcagttcacc gccaaactct tcacgcgcca gctggtagcc ccagtcttta
      781 aacgcgcctt cggtgaactt catgatgttg cctttgtgca ccagagtcac agagtcacga
      841 tcgttagcaa ttgcgtattc gatcgctgca cgaaccagac gtttggtgcc ttcttccgaa
      901 cacggcttaa taccgatacc acaatgttcc gggaagcgaa ttttcttcac ccccatctct
      961 tcacgcagga atttaatcac tttctcggcg tcggcagagt ctgctttcca ttcgataccc
     1021 gcataaatgt cttccgagtt ttcacggaag ataaccatat cggtcagttc agggtgttta
     1081 accgggcttg gagtgccctg atagtaacgt accggacgca ggcagatgta gagatccagt
     1141 tcctggcgca gggcaacgtt cagagagcga ataccgccac caacaggagt ggtcagcgga
     1201 cctttaatgg caacgcgata ttcacgaatc agatcaaggg tttcagcagg cagccagaca
     1261 tcctgaccat aaacctgtgt ggatttttca ccggtgtaaa tttccatcca ggagatttta
     1321 cgctcgcctt tataggcttt ctcgactgca gcgtcgacca ctttcagcat ggctggggtt
     1381 acatctacac cgattccatc accttcaatg taagggataa tcggattttc aggaacgttg
     1441 agtttgccgt tttgcagggt gatcttcttg ccttgtgccg gaacaactac tttactttcc
     1501 attcacctct ccttcgagcg ctactggttt gctcgtctgc caccacgttg catatgcgtt
     1561 tgcgtcctgc gatacggatg ctttagagca attttttgtt aatgatttgt aattggcttg
     1621 tcaatactac cctattgttt gccgtcatga aagatgcgcg ttattaggct ataatgcggc
     1681 aattcataat ctctgaaaat accatgcaaa aaacttcttt tagaaatcac ctggttaagc
     1741 gattcagctc gcaacgttct accaggcgta aacctgaaaa ccagcccacg cgtgtgatcc
     1801 tgttcaataa accctacgat gttcttccgc agttcaccga tgaagccgga cgcaaaacat
     1861 taaaagaatt catcccggtt cagggcgttt atgcagcagg tcgtcttgac cgcgatagcg
     1921 aagggttact ggtgctgacc aataacggcg cgttgcaggc gcgtttaacc cagccgggca
     1981 aacgcaccgg gaaaatctat tatgtgcagg tggaaggtat tcccacacaa gacgcacttg
     2041 aagccttgcg caatggcgta accttaaatg atggccctac cctgcccgcc ggcgcggagc
     2101 tggttgacga accagcgtgg ttatggccgc ggaatccacc aattcgtgaa cgcaaaagta
     2161 ttcccaccag ctggctgaag atcaccttat atgaaggacg taatcgccag gtgcgccgca
     2221 tgaccgccca tgttggtttc cccacgctgc gactgattcg ttatgcgatg ggtgattaca
     2281 ctttggataa ccttgccaat ggcgaatggc gagaagcaac agaataagga tgcacaatgt
     2341 ttaaaccaca cgttaccgtt gcttgcgtag tgcacgcaga gggtaaattt ttagtcgttg
     2401 aagagacgat taatggtaaa gcgttatgga accaacctgc cgggcatctg gaagccgatg
     2461 aaaccttagt ggaagctgcc gcccgtgagc tatgggaaga aaccggcatc agcgcgcaac
     2521 cgcaacactt tattcgtatg catcagtgga ttgcgccaga taaaacgccg tttttgcgtt
     2581 tcctctttgc cattgagctt gagcaaatat gcccgaccca gcctcatgac agcgatatcg
     2641 actgctgtcg ttgggtcagc gccgaagaaa ttttaaaggc gtcaaatctt cgttcgccgc
     2701 tggtggcgga aagtatccgt tgttatcaaa gcgggcaacg ctatccgctg gagatgattg
     2761 gcgattttaa ctggcctttt acaaagggtg tcatctaaaa ggctgcgtga tagaatacgc
     2821 cgccttgaag ttcaatgtcg tgagtgatcc aatgtctgaa accgcaaaaa aagtaatcgt
     2881 cggcatgtcc ggcggtgtcg attcctccgt ttctgcctgg ctgttgcaac aacagggata
     2941 tcaggttgaa ggcctgttta tgaagaactg ggaagaagac gacggtgagg aatattgcac
     3001 agcggcagcg gatctggctg atgcccaagc tgtctgcgac aagctcggca ttgaactgca
     3061 caccgttaac tttgctgccg agtactggga caacgtcttc gaactgttcc ttgccgaata
     3121 taaagccggt cgcacgccga atccggatat tctgtgcaac aaagagatca aatttaaagc
     3181 tttcctcgaa tttgccgccg aagatttagg tgccgattat atcgctaccg gtcattacgt
     3241 acgtcgggcc gatgtcgatg gcaagagccg cctgctgcgt ggtctggaca gcaataaaga
     3301 ccagagctac ttcctttata cgctcagcca tgagcagatt gcgcaaagcc tgttcccggt
     3361 cggcgaactg gaaaaaccgc aggtgcgtaa gattgctgaa gatcttggtc tggtcaccgc
     3421 gaagaaaaaa gactctaccg gcatttgctt cattggcgaa cgtaaattcc gcgagttcct
     3481 gggccgttat ctcccggcgc aaccgggcaa aatcattacc gtcgatggcg atgaaattgg
     3541 tgagcaccag gggctgatgt atcacactct cggtcagcgt aaaggtctgg gtatcggtgg
     3601 caccaaagaa ggcaccgaag aaccgtggta tgtggtggac aaagacgtcg aaaacaacat
     3661 tctggttgtt gcgcagggcc atgaacaccc gcggctgatg tctgtcgggt tgattgccca
     3721 gcagttgcac tgggtcgatc gcgaaccatt caccggtact atgcgttgca cggtaaaaac
     3781 ccgctatcgc cagaccgata tcccttgcac cgtcaaggcg ctggacgatg atcgcattga
     3841 agtgattttc gatgaaccgg ttgccgccgt gacgccgggc cagtctgccg tcttctataa
     3901 cggtgaagtg tgcctcggtg gcggtattat tgagcagcgt ctgccgctgc cggtctgatt
     3961 attatcttta cttaaaacaa ggaagcagtg aacgtggcaa agaattacta tgacatcacc
     4021 ctcgccctgg ccggtatttg tcagtcggca cgcctggtgc aacaactcgc tcaccagggg
     4081 cattgtgatg ccgatgcgct acacgtctca ctcaacagta ttattgatat gaaccccagc
     4141 tcgacgctgg cggtttttgg cggtagcgaa gccaacctgc gcgtcgggct ggaaaccctg
     4201 ctcggcgtgc tcaatgccag cagtcgccag ggcttaaacg ccgaattaac ccgctacaca
     4261 ctcagcttga tggtgcttga gcgcaaactc tcctcagcga aaggcgcgct cgacactctg
     4321 ggcaaccgga tcaacggcct gcaacgccag ctcgaacact tcgatttaca gtccgaaacg
     4381 ctgatgagcg cgatggctgc tatctatgtt gatgtgatca gcccgcttgg cccgcgcatt
     4441 caggtcaccg gttcccctgc tgtactgcaa agcccacaag tgccggcgaa agttcgcgca
     4501 accctgctgg caggcattcg cgccgccgtg ctctggcacc aggtcggcgg cggacgtctg
     4561 caactgatgt tttctcgtaa tcgcctgacc actcaggcaa aacaaattct tgctcattta
     4621 accccggagt tgtgatctat ggaattatcc tcactgaccg ccgtttcccc tgtcgatgga
     4681 cgctacggcg ataaagtcag cgcgctgcgc gggattttca gcgaatatgg tttgctgaaa
     4741 ttccgtgtac aagttgaagt acgttggctg caaaaactgg ccgcgcacgc agcgatcaag
     4801 gaagttcctg cttttgctgc cgacgcaatc ggttaccttg atgcaattgt cgccaatttc
     4861 agcgaagaag atgccgcacg catcaaaacc atcgagcgta ccactaacca cgacgttaaa
     4921 gcggttgagt atttcctgaa agaaaaagtg gcggagatcc cggaactgca cgcggtttct
     4981 gaattcatcc actttgcctg tacttcggaa gatatcaata acctctccca cgcattaatg
     5041 ctgaaaaccg cgcgtgatga agtgatcctg ccgtactggc gtcaactgat tgatggcatt
     5101 aaagatctcg ccgttcagta ccgcgatatc ccgctgctgt ctcgtaccca cggtcagcca
     5161 gccacgccgt caaccatcgg taaagagatg gcaaacgtcg cctaccgtat ggagcgccag
     5221 taccgccagc ttaaccaggt ggagatcctc ggcaaaatca acggcgcggt cggtaactat
     5281 aacgcccaca tcgccgctta cccggaagtt gactggcatc agttcagcga agagttcgtc
     5341 acctcgctgg gtattcagtg gaacccgtac actacccaga ttgaaccgca cgactacatt
     5401 gccgaactgt ttgattgcgt tgcgcgcttc aacaccattc tgatcgactt tgaccgtgac
     5461 gtctggggtt atatcgccct taaccacttc aaacagaaaa ccattgctgg tgagattggt
     5521 tcttccacca tgccgcataa agttaacccg atcgacttcg agaactccga agggaatctg
     5581 ggcctttcca acgcggtatt acagcatctg gcaagcaaac tgccggtttc ccgctggcag
     5641 cgtgacctga ccgactccac cgtgctgcgt aacctcggcg tgggtatcgg ttatgcgctg
     5701 attgcgtatc aatccaccct gaaaggcgtg agcaaactgg aagtgaaccg tgaccatctg
     5761 ctggatgagc tggatcacaa ctgggaagtg ctggctgagc caatccagac agttatgcgt
     5821 cgctatggca tcgaaaaacc gtacgagaag ctgaaagagc tgactcgtgg taagcgcgtt
     5881 gacgccgaag gcatgaagca gtttatcgac ggtctggcgt tgccagaaga agagaaagcc
     5941 cgcctgaaag cgatgacgcc ggcaaactac attggtcgcg ccatcaccat ggttgatgag
     6001 ctgaaataaa ctcgtatcag tgccggatgg cgatgctgtc cggcctgctt attaagatta
     6061 tccgcttttt attttttcac tttacctccc ctccccgctg gtttatttaa tgtttacccc
     6121 cataaccaca taatcgcgtt acactatttt aataattaag acagggagaa ataaaaatgc
     6181 gcgtactggt tgttgaagac aatgcgttgt tacgtcacca ccttaaagtt cagattcagg
     6241 atgctggtca tcaggtcgat gatgcagaag atgccaaaga agccgattat tatctcaatg
     6301 aacatttacc ggatattgcg attgtcgatc tcggattgcc agacgaggac ggtctgtcac
     6361 tgattcgccg ctggcgtagc aatgatgttt cactgccgat tctggtatta accgcccgtg
     6421 aaagctggca ggacaaagtc gaagtattaa gtgctggtgc tgatgattac gtgactaaac
     6481 catttcatat tgaagaggtg atggcgcgaa tgcaggcatt aatgcggcgt aatagcggtc
     6541 tggcttcaca ggtcatttcg ctacctccgt ttcaggttga tctctctcgc cgtgaattat
     6601 ctattaatga cgaagtgatc aaactgaccg cgttcgaata caccattatg gaaacgttga
     6661 tacgcaataa tggcaaagtg gtgagcaaag attcgttaat gctccaactc tatccggatg
     6721 cggagctgcg ggaaagccat accattgatg tactgatggg acgtctgcgc aaaaaaattc
     6781 aggcacaata tccgcaagaa gtgattacta ccgttcgcgg ccagggctat ttgttcgaat
     6841 tgcgctgatg aaaaaattac tgcgtctttt tttcccgctc tcgctgcggg tacgttttct
     6901 gttggcaacg gctgcggtag tactggtgct ttcgcttgcc tacggaatgg tcgcgctgat
     6961 cggttatagc gtcagtttcg ataaaactac gtttcggctg ttacgtggcg agagcaatct
     7021 gttctatacc cttgcgaagt gggaaaacaa taagttgcat gtcgagttac ccgaaaatat
     7081 cgacaagcaa agccccacca tgacgctaat ttatgatgag aacgggcagc ttttatgggc
     7141 gcaacgtgac gtgccctggc tgatgaagat gatccagcct gactggctga aatcgaatgg
     7201 ttttcatgaa attgaagcgg atgttaacga taccagcctc ttgctgagtg gagatcattc
     7261 gatacagcaa cagttgcagg aagtgcggga agatgatgac gacgcggaga tgacccactc
     7321 ggtggcagta aacgtctacc cggcaacatc gcggatgcca aaattaacca ttgtggtggt
     7381 ggataccatt ccggtggagc taaaaagttc ctatatggtc tggagctggt ttatctatgt
     7441 gctctcagcc aatctgctgt tagtgatccc gctgctgtgg gtcgccgcct ggtggagttt
     7501 acgccccatc gaagccctgg caaaagaagt ccgcgaactg gaagaacata accgcgaatt
     7561 gctcaatcca gccacaacgc gagaactgac cagtctggta cgaaacctga accgattgtt
     7621 aaaaagtgaa cgcgaacgtt acgacaaata ccgtacgacg ctcaccgacc tgacccatag
     7681 tctgaaaacg ccactggcgg tgctgcaaag tacgctgcgt tctctgcgta gtgaaaagat
     7741 gagcgtcagt gatgctgagc cggtaatgct ggagcaaatc agccgcattt cacagcaaat
     7801 tggctactac ctgcatcgtg ccagtatgcg cggcgggaca ttgctcagcc gcgagctgca
     7861 tccggtcgcc ccactgctgg acaatctcac ctcagcgctg aacaaagtgt atcaacgcaa
     7921 aggggtcaat atctctctcg atatttcgcc agagatcagc tttgtcggtg agcagaacga
     7981 ttttgtcgag gtgatgggca acgtgctgga taatgcctgt aaatattgcc tcgagtttgt
     8041 cgaaatttct gcaaggcaaa ccgacgagca tctctatatt gtggtcgagg atgatggccc
     8101 cggtattcca ttaagcaagc gagaggtcat tttcgaccgt ggtcaacggg ttgatacttt
     8161 acgccctggg caaggtgtag ggctggcggt agcccgcgaa atcaccgagc aatatgaggg
     8221 taaaatcgtc gccggagaga gcatgctggg cggtgcgcgg atggaggtga tttttggtcg
     8281 ccagcattct gcgccgaaag atgaataaat atgtccatac ttcacgcatt acgttaagca
     8341 tccgttataa tcggttgcag ataccagcct gtggatgctt aacatggaat accaactcac
     8401 tcttaactgg cccgattttc ttgaacgtca ctggcagaaa cgcccggtgg tgttaaaacg
     8461 cggctttaat aattttattg acccgatctc tccagacgag ttggcgggtc tggcgatgga
     8521 aagcgaagtt gacagtcgac tggtcagtca ccaggatggc aaatggcagg tcagccacgg
     8581 cccgttcgaa agctacgatc atctcggtga aaccaactgg tcattactgg tacaggcagt
     8641 gaaccactgg catgagccga ccgccgcgct gatgcgaccg ttccgtgaac taccggactg
     8701 gcgtattgat gatctgatga tttctttttc tgtacctggc ggcggcgtcg gcccgcatct
     8761 cgatcagtac gacgtgttta tcattcaggg taccggacgt cgtcgctggc gagtgggcga
     8821 aaagctgcaa atgaaacagc actgcccaca tccggatctg ttacaggtcg atccgttcga
     8881 agccatcatc gatgaagagc tggagcctgg tgatattctt tatattccgc caggattccc
     8941 gcatgaaggc tacgcgctgg aaaatgcgat gaactattcc gtgggctttc gcgcgccaaa
     9001 tacgcgggaa ctgattagtg gatttgccga ttatgtgctg caacgtgaac tgggcggcaa
     9061 ctactacagc gatcctgatg ttccacctcg cgctcatcct gcggatgttc tgcctcaaga
     9121 gatggataaa ctgcgtgaga tgatgctcga attgatcaac cagccggaac actttaagca
     9181 atggtttggc gagtttatat cccagtcacg tcatgaactg gatatcgcgc cgccggaacc
     9241 gccttatcag ccagatgaaa tctacgatgc gctgaaacaa ggtgatgtgc tggtgcgcct
     9301 gggtggtctg cgcgtattgc gcattggcga cgacgtgtat gccaatggtg agaagatcga
     9361 ttccccgcac cgtccggcac tggatgcact cgccagcaac attgcgctga ctgcggagaa
     9421 ttttggcgat gcgctggaag atccgtcatt cctcgcgatg ctcgcggcgc tggtcaatag
     9481 cgggtattgg ttcttcgaag ggtaagtttg gatttaagcc ggatgcggca tcacatgccg
     9541 catccctttt cgcttacttc cgttgcgccg ttaactcggc aatacggacg atcacctgca
     9601 ccgctttttc cataccttcc agagtcacaa actcatgctt accatgatag ttgtaaccgc
     9661 cagtgaacaa gttcgggcac ggtaatccca taaacgacaa ctgcgcgccg tcggtaccgc
     9721 cgcggatcgg tttcagttcc ggttcaatat cgcagtcacg cattgcctgc tgggcgatat
     9781 cgagaatatg cggatgctca accactttct cgcgcatatt gtagtaactg tcttcaatca
     9841 ccagttcaat gtagcaatca ggatgtaacc ctttgcccac ttttttggcg atctccatca
     9901 ttttacattt acgcgcttca aactgtttac ggtcgaaatc acggatgatg tagtgcatat
     9961 cggcccgttc aacggtgcct ttcatgcccg ccaggtgata gaaaccttca tagccttctg
    10021 tcatttccgg gctttcatcc gccggaactt ccgcatgaat acgtgccgcc agcgacagcg
    10081 catttaccat cactcctttc gccgtgcccg gatgaacatt gttaccgaca attttgatat
    10141 tgaccgatgc ggcgttgaag ttttcaaact ccagttcgcc tacgccacca ccgtcaacag
    10201 tgtaagccca gcgggcatcg aaggcatcaa catcaaaatg tttcgcccct ttgcccactt
    10261 cttcatccgg ggtaaaggcg acgcgaatat caccatgcgg aatgtttttc tgttgcaata
    10321 ccgccagcgc ggtcatgatt tctgcaatac ctgctttgtc atcggcacct aacaaggttt
    10381 taccatcggt ggtaatcaat gtctgaccca gtagctgatg cagcaccggg aacataaccg
    10441 gtgataaaac ttcatcgccg atacccagcg caatatcgcc accgcgatag ttttcaacaa
    10501 tttgcggatt aacatttttg ccgctgcaat ccggtgaggt atccacatga gaaataaagc
    10561 caatcgccgg gatatcgcca gggacgttag ccggtaacgt cgccatcaaa gtgcccttct
    10621 cacttaaggt cacattgata agccccattt cttcgagctg ctctttcagc agatgcaata
    10681 acttccattg gccttccgtg ctgggaacct gtctcacccc tgcttttgat tgggtatcca
    10741 gagacacgta gttcaaaaat cgctcaagta gtttatccat gtagtcaccc tcactttttg
    10801 tgacaacatt attaagaagc aagaaaagac aaatattgcg tcaggtcact tttacccctg
    10861 caagcgggaa tatttatcag cattacctta atgaatataa ag
//
LOCUS       DADMIB010000144        10897 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.145, whole genome shotgun sequence.
ACCESSION   DADMIB010000144 DADMIB010000000
VERSION     DADMIB010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10897
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.145"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(228..2087)
                     /gene="gss"
                     /locus_tag="JNZ89_003401"
     CDS             complement(228..2087)
                     /gene="gss"
                     /locus_tag="JNZ89_003401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutathionylspermidine
                     amidase/synthase"
                     /protein_id="HAY8937164.1"
                     /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF
                     RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ
                     AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ
                     WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLEN
                     KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH
                     ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD
                     SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE
                     NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ
                     IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF
                     PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI
                     YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK"
     gene            2292..3158
                     /gene="yghU"
                     /locus_tag="JNZ89_003402"
     CDS             2292..3158
                     /gene="yghU"
                     /locus_tag="JNZ89_003402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HAY8937165.1"
                     /translation="MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHP
                     LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIP
                     ALRDHTHNPPICVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGG
                     FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGN
                     VVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDAS
                     DFETNTEDKRQG"
     gene            complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="JNZ89_003403"
     CDS             complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="JNZ89_003403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation factor HybG"
                     /protein_id="HAY8937166.1"
                     /translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL
                     LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA"
     gene            complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="JNZ89_003404"
     CDS             complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="JNZ89_003404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HAY8937167.1"
                     /translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV
                     RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTG
                     DSLIVKSIEVE"
     gene            complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="JNZ89_003405"
     CDS             complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="JNZ89_003405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-2 assembly chaperone"
                     /protein_id="HAY8937168.1"
                     /translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD
                     FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV
                     SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGE
                     NA"
     gene            complement(4357..4851)
                     /locus_tag="JNZ89_003406"
     CDS             complement(4357..4851)
                     /locus_tag="JNZ89_003406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HAY8937169.1"
                     /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA
                     GMELLGDMANRDHLIIADAIVSKKNTPGTMMILRDEEVPALFTNKISPHQLGLADVLS
                     ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE
                     AIHD"
     gene            complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="JNZ89_003407"
     CDS             complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="JNZ89_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 large subunit"
                     /protein_id="HAY8937170.1"
                     /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
                     VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH
                     DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA
                     SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL
                     AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRG
                     KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS
                     WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE
                     STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI
                     GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
                     RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
                     L"
     gene            complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="JNZ89_003408"
     CDS             complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="JNZ89_003408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HAY8937171.1"
                     /translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD
                     LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
                     GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
                     VSLKRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF
                     IMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLS
                     LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL
                     VAFNPGGGYAYFPTREELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
                     "
     gene            complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="JNZ89_003409"
     CDS             complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="JNZ89_003409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HAY8937172.1"
                     /translation="MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDS
                     TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE
                     NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
                     KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
                     ALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK
                     LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES"
     gene            complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="JNZ89_003410"
     CDS             complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="JNZ89_003410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 small subunit"
                     /protein_id="HAY8937173.1"
                     /translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT
                     NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
                     HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAW
                     GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN
                     RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ
                     FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA
                     GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
     gene            complement(10015..10302)
                     /locus_tag="JNZ89_003411"
     CDS             complement(10015..10302)
                     /locus_tag="JNZ89_003411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2623 domain-containing protein"
                     /protein_id="HAY8937174.1"
                     /translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY
                     EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN"
     gene            complement(10421..10897)
                     /locus_tag="JNZ89_003412"
                     /pseudo
     CDS             complement(10421..10897)
                     /locus_tag="JNZ89_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
BASE COUNT         2659 a         2990 c         2692 g         2556 t
ORIGIN      
        1 caaagtgaaa tatcattttt taacgataaa aagagtgtta tttcttgtgt atcagacaat
       61 aagcattcat tcaaaacctt tagaaataat caaaacacag gtattccact ggttaatata
      121 ttcacatatg aaatgaataa atattagaac atataaatat tgaatatttt gattaatccc
      181 cgtactgatt attcttcata atcagtacgg ggttgctaca acatgtatta ctttttcacc
      241 acaattaacg gttcaatatc actctctttt ttgatgacca gtgattcatc accgcgcaaa
      301 cacgtcccac cgtagttgcc gcccacggtg aaggtacata cctgaatgta tttaccgtcc
      361 actttcggca aacaccacag ttgctgatag atgtttttct gctcggcaaa tttaccgctg
      421 gttttgtcca gcacctcttc atgatggctg accaggtcga tattgctacc acagcgaccg
      481 gcaatcggtt tcactgcgta acctgttttc accaattcat cattaacagt gaaatcggta
      541 tccagcaggt aacgatggtg cgggaacagc gaccagagga tcggcagaat cgctttgttg
      601 ccggggatca ccgtccacag cggctcaaag actagcactt ccgggcgcag caatacgtcg
      661 ataagacgca cttcgttttg cggatgaccg gtacggattg gcaccgcagc aaactcacgg
      721 tcgctaactt cacgaatctg atcaaacgcg gtttcccacg cccaggtttt ccacacgcag
      781 ttaaccagtc gcccttcccc atcaatcagt tgcccggcag catcccagcc cagttcatcc
      841 aatccacgca agatacgcgt ttcaaagccc gcctggtgca gcgcctgctc cataaactgc
      901 gcgtgatagt tttcctcgat atctttgtcc tgcatgatat ggacaaacgg acgtgcacga
      961 ctgtgtttcc aggcaccagc caattcgtta atcagccctt ccgccggatt gaagccgttg
     1021 cctttatagc cctgctccgc ccaacgttcg aggatcaagc ccgcttcggt atgacaggag
     1081 gcggagtcgg cgttgtactc gtaaaccttc aggccacgct catccatgca gaaatccata
     1141 cgaccagtga tcatatggtg acggcgacgc tgccaggaga gacgcaaacg tggccagagg
     1201 attttcggaa tgtcgaacag cgccagcagg ttgtcatctt tcagtacctt gtcggttgcg
     1261 tgaagataca tcaggtgcag ctcgttggtg gctttaatta gctcctgctc ggcactctcg
     1321 gtaatggtgt agtaatgata aggatcctga ttgatcacct gaccgttggc ctgcacatag
     1381 gcgttttgca gcggatcttt ttcatccagc catttaccgt caaactggcc tttgttttcc
     1441 aggcgcgctc cgctgatttt cagcagctcg cctgcaattt ccggctgcgg taagctgtat
     1501 tcagtatctt ccgtctggat catccagccc agaatggtgg tgtcatcaaa agtgtctttc
     1561 agggtatagc agccgttttc gaccaccatc tccagctcac gcgtccactg ttgcccttgc
     1621 ggcaacgggg aatgaatcac gttctgttcc gcaatacgga ctttgttgcc atgcaattgg
     1681 gtaatgatgg cgacatggcc agtgtcttta aattcaccgc ctttatccca gataagaagc
     1741 gcacccgcga ccggcgcacg cggcgagccg ttaggaaatg cctgcaatgg caggatgttg
     1801 tcattaacca cttctcgcag gaagcgcagc gagaaaatct cccacgccat acccacgtca
     1861 gtaaagacca caccgtaatt cagaaagaga aaacggcgag caaattcaac gcattgccac
     1921 ttgtggccca tatattcgtc gtcgatatag ctacggaata cggcgtcatc ttcgtattcc
     1981 tgcggatcga gagaactgta atctgaagag tagattgcta ccccacctgg ggcgtagccc
     2041 aataatgtcc cgaacggggc atcctggctg gtcgttcctt tgctcatcac tttaccttta
     2101 acaatacaac ctaagcagtt ggcgtaattg ttgtgctctg attacctgct cagcgacatt
     2161 aaccggacag aggtcagact aatcatacac ctcatcgcag cggctggcgc aaagggttaa
     2221 aaaattcaca ttctgtacag caagtgacct gccacactgc ttcaacacta ccactcagaa
     2281 ggcaactcac tatgacagac aatacttatc agcccgcgaa agtctggacg tgggataaat
     2341 ccgctggcgg cgcgttcgcc aatatcaatc gcccggtttc tggtccgacg catgaaaaaa
     2401 cgctgcccgt tggcaaacac ccattgcaac tttattcgct gggaacgccg aacggtcaga
     2461 aagtaacgat tatgcttgag gagctgctgg cgctgggcgt tactggtgca gagtacgacg
     2521 cctggctgat tcgtattggc gatggcgatc aattctccag cggctttgtc gaagtgaacc
     2581 caaactcgaa gatcccggcg ctgcgcgatc atacgcataa tccgccgatc tgtgtgtttg
     2641 aatctggttc gatcctgctt tatctggcgg agaaatttgg ctacttcctg ccgcaggatt
     2701 tggcaaagcg tactgaaacg atgaactggc tgttctggtt acagggcgcg gcaccgttcc
     2761 tcggcggtgg ttttggtcac ttttaccatt acgcaccggt aaagattgag tacgccatca
     2821 accgctttac catggaagcc aaacgtctgc tcgacgtgct ggataagcaa ctggcgcagc
     2881 ataagtttgt tgcgggcgat gagtacacca ttgcggatat ggcgatttgg ccgtggtttg
     2941 gcaacgtggt gttaggtggt gtgtatgatg ccgctgagtt tcttgatgcg ggcagttata
     3001 agcatgtaca acgctgggcg aaagaagtag gcgaacgtcc ggcggtgaaa cgtgggcgta
     3061 ttgttaaccg caccaacgga ccgctgaatg agcagttgca tgagcgccat gacgccagtg
     3121 atttcgagac gaatacggaa gataagcgtc aggggtaagg gttggtgttc gtcgcagcaa
     3181 gccatccagg ccggataagg cgttcacgcc gcatccggca atcgtgcaca atgcctgatg
     3241 cgacgctgcc gcgtcttatc aggcctacga aagctaatca tcacgcgctg gtaatgtcgt
     3301 aatccatttg gcgcagtgcg tctaatgtgg ctttggcttc atcttcgtcg atgatgctca
     3361 tggcaaatcc gacgtgtacc agcacccact ggcccagtag atcggcaggg ttaccttcac
     3421 aaatcagggc gatattcacg tcgcgcttga taccacatac ttcaacctgc gcaagctggt
     3481 gaatatcttc accgacagcc agcacctggc ctggaacgcc aatacacatt attaactccg
     3541 gttattcaac ttcaatactt ttgacgatca gcgaatcgcc ggtatcgaca cgcaaccgct
     3601 cgccgtgaca gagcggacac tgcgcatcgt gctgatgaat ctccaccacc tggctgcaat
     3661 cccagcacca ggcctgggcg ggtttataga cgatatgtaa atcgcaccct tgcgccaccg
     3721 ttccgtggca gacaatttca aaactaaaac ggacggcgct ctcctcaacg caggagagcg
     3781 cgccaatttc cagccacacg gcggtgacgc gcttaacatc gtgctgctcc gcctgccgtt
     3841 ggataatttc aacggcgctc tggcaaagcg acaactcatg cattttcgcc actcctgcga
     3901 ccaaacagca gggcgcgacg ccctgcgtgt ggtacatccg gattcgtgac tggcagcgaa
     3961 aggatcattc gtgcgcagtc atccgtcagg cgttggccct cttcaatcga catactgtgc
     4021 gaaagcggtg acatcagcga acaggagagg tattgcgaaa caccgtccag ttcgccaacg
     4081 gtaaaggtca tggtgccata cggcagttgc agaccaattt tttcactcac tttgcgcagc
     4141 ggccagagtt gatccgggcc ggggaagata actgcactca gcatccacgg ggtgatcaca
     4201 caccccgtcc actgaccttc gaacagcgta aaatcagaaa catacaccgg cattgaagga
     4261 tgcagaaaag agagatcgtg catcgaacgc cgggcaattt cttcaaacgc tgcctgtact
     4321 tgcgccttcg gggaggtctg gaaacctgct atctcttcag tcatgaatcg cctcccgtgg
     4381 gatggcttcc acgcctgatt cgcgcagcgc agccagaacc tgctcaagcg caggttcaat
     4441 cattgcttca accgtcggcg ttaagccgat gtgtggctcc agcgattccg ggatcacgcc
     4501 gaccagggtc agctttttcg gaaactcacc ggtgaagcgc agggccgaca atacgtcggc
     4561 caggccaagc tgatgcggag agattttgtt ggtaaacaac gccggaactt cttcatcccg
     4621 caggatcatc atcgttcccg gcgtgttctt tttcgacaca atggcatccg caataatcag
     4681 atgatcgcga tttgccatgt cgccaagcag ctccattccc gccgtgccgc catcgaggat
     4741 ctcaacataa tccggcagaa tgtatcgttg ctctaacgct tcgacaatcc gcacaccgat
     4801 ggcttcatcg gtcagcaaaa tattgccgac ccctaagact aaaatacgca ttacagaacc
     4861 ttcactgaaa ccacttcgtt gccgtcggca tccactacgt gtaccgcaca ggccatgcac
     4921 gggtcgaagg agtgaatggt acgcaccact tccagcggtt tattcggatc agcaaccggt
     4981 gtacccacca gcgactgctc gtaaggaccg acgtcatcat tgaagttacg cggaccagag
     5041 ttccaggttg atggaacaac tgcctggtag ttactgataa taccgtcttt aataaccatc
     5101 cagtgagaga gcataccgcg cggcgcttcg aggaagccaa cacctttgaa ctcacccgtt
     5161 gccggaatgt tcggtttcac aaaggtggtg tgatcgcctt tgccgatatt ggtgatcagt
     5221 gcactgtatt gattttgcag gatatcctgc aattcgcagc agtgaacggt acgaccaata
     5281 atacggccca gcgtggagtg cagctgcgcc acttccagcg tgttgccagt cagtttctga
     5341 taaatcgcaa cgatttcatt cagtttgttc tgggtagatt cgcgacctgc cgccagtttc
     5401 accagcatat tagccagcgg acccacttct accgttttgc cgtagaaagt cggtgatttc
     5461 acccaggaat atttcccgtc gtcagaccaa ccatcataag ccggaatggt ggtaccttcc
     5521 cacggtgcct gcggcgcttc gtctttatac caggagtgct tcgcgctttc ctgaatgcct
     5581 ttgatcaggt attcatcgga atgagaagtg atcggacgat acgaggacag atccgcattc
     5641 tcaatgtagc cgcccgggaa caggaagctg ccgtttttac tgtcggtcgg gaattccggc
     5701 acgctcaggt agttcaccgc acctttaccg cgcgtcagcc attccgggta gaacgcggca
     5761 ataactgcgg tatcaacctt ataaacctgt tcaacaaagt cgctcagctt gtcgatgaaa
     5821 gacttgatgt acatcaggcg ctcaaggttc agcacgccca aaccgtcgag gttgatcggg
     5881 ttcgcgacac cacctaccgc caggttctga atgtgcggcg ttttaccgcc cagcagcgcc
     5941 acgacgcggt tagcgtcacg ctggcactcc agcgcctgca ggtagtgcgc taccgcaatc
     6001 aggttcactt ccggcggcag tttcatcgcc gggtgacccc agtagccatt ggcgaaaata
     6061 cccaactgac cgctggcaac cagatctttg atcttgttct gaactttagt gaactcttcc
     6121 ggactgttca gatgccaggt cgaaacgcct ttcagcattt cggaggcttt ggttgggtca
     6181 gcttgcagtg cagaagtgat gtccacccag tccagcgccg aaagctgata gaaatgaacg
     6241 atatggtcat gcgtggtgtg cgcagccaga atgatgttac ggatgtattg cgcgttaacc
     6301 ggaacgtcga tattcagcgc actttctgcc gcacgaacgg aagacagcgc gtgagtggta
     6361 gtacatacgc cacagatacg ttgcacaatc atccatgcat cgcgcggatc gcggtttttc
     6421 acgatctctt ccatgccgcg ccacatggta ccggaagccc atgctttcga aacgacgcca
     6481 ttttcgattt cgcaatcgat gcgtaaatgc ccctcaatac gggttaccgg atcaatagta
     6541 attctctggc tcatgctttg ctcgcctcat gacgattatg atcgttttgt tttaaaggag
     6601 gaagtatcgg cagtagacga atgagtacga tgtaagcgca aatctcaata gccacaaaac
     6661 caatagaaat caacagttct tccctggtcg ggaagtaggc gtaaccgccg cccgggttga
     6721 atgccaccag cgaataggtc agacgccagg ttgcacaacc taacagtgcg ctcagtgctg
     6781 acaggaacag catgcgggaa tcattacgca gcttcgccac acgcagaacg accagcggga
     6841 agagcatcag caggacttca atccagaaca tcacggagta gaagtcaccg gcaaacgcta
     6901 acgacagctt gtcgcgatag ataagctcgc caaagcgcag cacgataaaa atcgccagca
     6961 acacactgat ggtgttggtc agcttgacga acagactctt ttcatccgga ccgttgccac
     7021 gcagacccgc ctgcaccagc gaaccttcaa agatgacaat cgagaagccc atgatgaacg
     7081 ccgtcagcag cgagaacagc ggcaacattt catagctctg ccacaacgga tgcaccttgt
     7141 agcccgccga gatcatcagt gaccccattg aagactggtg catggtcggc aacagcgcgc
     7201 caagtgcaat gatgaagaac atcaccttgt tcagacgctt gagagaaacc ttccagccca
     7261 gacgttcaaa cagtgccgga gcaaactcca gtgccatcac gccgatatag atggtcatac
     7321 agaccgccgt ctcgaacagt accgagttca cgttgaagtg acccggaatg tagaagtacg
     7381 gcaggttcca gtagcgaccc acgtcgatag tgatcgacaa gccacccagt gagtaaccaa
     7441 acagactcgc caacagcgcc ggacgcacca gcggatggta ttgcccacgg ttaaagacgt
     7501 ataccgccca cgccagcgcc cagccgccac aggcaaagcc ggtaccaatc agcaggtcaa
     7561 acgcgatcca cacgccccac gggaagccgc cgttcaggtc agagacagag cccagaccga
     7621 acaccagacg cttcacaatc aggagcatac agatgacgat taacggtcca aaaatcatga
     7681 ccggtttact gatgattttg ccgcccagcg gttgtggatc atgactcatg atcgtctcct
     7741 ccgtcgtgat ggtcgttttt ggtgttgcga cgaaccagca cggttaagcc cgccagcaca
     7801 gccagtggta gcatcatgcc tttatacagg gtgtgttgaa tattttcgga acgcgcaccg
     7861 gtagaaagat cgtccagttt cggcaggtcg agattttcat aaggcacacc cgtcagtacc
     7921 agaacctgag taccgccgcc ctctttctcg ccgtacagat gcggataata tttcggcacc
     7981 gtatgcaggt aagtgtcgcc agatttcagc gtctgacgcg gatagtggta ttcgctgcca
     8041 ggcttcagcg ccagacgttt tttcgcctcc gccatcagct cttcacgcgt accgaaaatc
     8101 accgcgcccg ccgggcacac ttctacgcag ccaggcagac cgcctttatc gagacgttcc
     8161 acacctttct ggttgcacag ctcgcactta tgcagcgcac caaacgggtt gttgtagtcg
     8221 tacttcggca cgttgtacgg acaggcgacc atgcagtaac ggcaaccggt gcacacgtct
     8281 ttgtcgtaat ggacaatgcc ggttttcgga tcttttttca gtgcagagac cgggcacaca
     8341 gagacacagt tcggatcgac gcagtgcata cactgtttct taatgtacgc gtagccgttc
     8401 tcctcctggt ctttgttgac ccctgtgccg ctggtccaca cctgaatgat gttattggta
     8461 tacggcgaca gtttgtcgtt gttcgaccag gtctgttccc cttgcgggtt acgttcaggg
     8521 aagttgatat cctgacactt ggtgacgcaa gcctggcagc ctacgcacaa ggtcgagtcg
     8581 tacaacatcc ccagcgatcc cggaattggc gggcggtttt cagcagccgc atgactgaca
     8641 gacggcagcg cgcccgtcag caatgccccg caggaggctg ctttaataaa attacgtctg
     8701 ttcacggtta ttctccccgt gagtcagcgt tatctttctt ttgctgacga cccagttcac
     8761 gcaccgccat cacgctgaca ccggcaacca gcccaaccac accgccgagc aaaccaatag
     8821 cgcctgcaga gacgttaccg ccctctttag cgttaacatc cggtttctgt gaacgcggag
     8881 tctgattttc gacgttggca agctgatgga tgcctttatg gaagccgata ccttcttcgt
     8941 tacagccata gcatgggtga ccaatcgcta ccggccacac gccgccaaca tcgcagaatt
     9001 gcagcgttga gcagttgccg taagtttctg gccctttaca gccgaggtgg tacaggcacc
     9061 agccttcacg gtggccttca tcaccgaact ctttggcaaa acgaccagca tcgaagtgcg
     9121 ggcgacgttc gcagtgttcg tgaatcagac ggccataggc gaaggtcgga cgatttttgt
     9181 catccagttt cggcggtttg ccgtaagtga tgatgtgcgc aacggtcgcg aggaagttgt
     9241 gcgggttcgg cgggcagccc ggaatattga taacggtttt gcctggcaga acttcttgca
     9301 ggctgactgc gccagttggg ttaactccag ctgcggcaac accgccccac gcagagcagg
     9361 aaccgatagc gataatcgct gctgcgcctt ctgccgcttt gcggatgtga tccacaatcg
     9421 gctcaccagc aaccatgcaa taaataccgt tatcttttaa tgggatggaa ccatccacaa
     9481 ccaacacata ctgccctttg tacttctcaa gtgcgttatg tttgttctct tcgacctgat
     9541 gaccgaaggc ggcggaaagc acttcgtgat actccagaga gatagtctcc agcacgaggt
     9601 tttctaccgt tggatgcgtt gcacgaagca gagattccgt acaaccggtg cactcctgcg
     9661 cgccaatcca gataactggc ggacgctgcg ggttagtaac cgattcggcc atctctgcag
     9721 cggctttgct acttaacccc atggtggcgg ctaatgctgc acaaagcttc atgaaatcac
     9781 gacggttaat gccgtgagaa tggatgaggg tgttatctcc agtcatttat agttattccg
     9841 ttgcgaagac ctggcatata ttttgcctca atcgcaaaat caataatgcg atcgatgcgc
     9901 catttaccac acatttatta tggttatcga tatcatgata ctgcggcggg gcgctaaaac
     9961 gaagggaaga agcattagtg taattaatta aagcaagata atacgtatgt ttgatcaatt
    10021 ttcgaggcga taaccggcca taaaaaagcg caacgtagaa caggaattat tctcacgaaa
    10081 gaaatccatt accatctctt tatccagtcc atagcggcgc gtcagaatac ccgcttccca
    10141 ggcgctaagc tggcgatctc cggtcttttc gtacatccgg tgtgagtagc ctaatacaaa
    10201 accgcgttta taatcggcac agaattttgt cacattaacc gcactgtcgg catgcgttgc
    10261 ttttaatccc gccattaagc ctttaccaaa atggttattc atcgttcacc tcattcgcta
    10321 tatattatca tatatagcaa tattttaggc aaagaacgac ttttgcgcac gctatttttt
    10381 catgcttgtt taagacgtaa tcccgtaaga gataaaccca tcaggagaga tatttatcga
    10441 accatttcag cgtcctttgc caggcaagat cggcggcaga tttgtcataa cgaggcgtgg
    10501 aatcattatg gaatccgtga ttaacccccg gatagatata cgcctcatag accttattat
    10561 tggctttcaa cgccgcctca taagcgggcc agccctcgtt gattcgggtg tccagttccg
    10621 cgaagtggag tagtaaaggc gcttcaatct tcgccacatc ggcagtgggt gcctgacgac
    10681 cataaaacgg caccgcgcag gccagttccg gatacgcgac agccgccgcg ttcgatacac
    10741 caccgccata gcaaaatccg gtaataccca cttatgcctg tcgcttgcgg atagcgttgc
    10801 ataaactcaa ttgcggcaaa gaaatcattc atcagtttgg ttggatcaac ctgctgttgc
    10861 agctcacgac ctttatcatc atttcccgga taacctc
//
LOCUS       DADMIB010000145        10896 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.146, whole genome shotgun sequence.
ACCESSION   DADMIB010000145 DADMIB010000000
VERSION     DADMIB010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10896
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.146"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            296..1171
                     /locus_tag="JNZ89_003413"
     CDS             296..1171
                     /locus_tag="JNZ89_003413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001224622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated protein"
                     /protein_id="HAY8937175.1"
                     /translation="MRKFILISMITLASVSLGACRQNVTIKQDAPGQKAFLIDGQIYD
                     LHSGKIISSSELLADLATARHLIIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEML
                     TSDQQPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDIVMQLLRGPYPLLNA
                     NIGREQMLALYKKNEFPKGKKSTAPVVQEALRETIIAMHEGNLESQQLTSMLSVQQQR
                     DRYMARQLLSAPVPSLLIAGGYHASKNMGVPLHMEDLATGTHPVVLMLAEKGMNITVD
                     HADYVWFVAPDTTKR"
     gene            1179..1955
                     /locus_tag="JNZ89_003414"
     CDS             1179..1955
                     /locus_tag="JNZ89_003414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004095468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HAY8937176.1"
                     /translation="MMNILHFPQSVKWSSWFICSLLLHGLIFLTFIWRFSEVQPAMSP
                     APAIMLQWAEIIEAPSSPLSLPVGIAQQESAVTEEKQQTEDRQQRPVTEDSDATIEIT
                     RKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVSSNAAPQALVESSRIAAPFNSDSTKRD
                     NSEASWESRVKGHLNRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGTLS
                     LDREAIAVLERAQPLPKPPPEILEGGLFKVKMPITFKLKE"
     gene            2124..4385
                     /locus_tag="JNZ89_003415"
     CDS             2124..4385
                     /locus_tag="JNZ89_003415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016536327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY8937177.1"
                     /translation="MNVIKLAIGSGILLLSCGAYSQSISEKTNSDKKGAAEFSPLSVS
                     VGKTTSEQEALEKTGATSSRTTDKNLQSLDATVRSMPGTYTQIDPGQGAISVNIRGMS
                     GFGRVNTMVDGITQSFYGTSTSGTTAHGSTNNMAGVLIDPNLLVAVDVTRGDSSGSEG
                     INALAGSANMRTIGVDDVIFNGNTYGLRSRFSVGSNGLGRSGMIALGGKSDAFTDTGS
                     IGVMAAVSGSSVYSNFSNGSGINSKEFGYDKYMKQNPKSQLYKMDIRPDEFNSFELSA
                     RTYENKFTRRDITSDDYYIKYHYTPFSELIDFNVTASTSRGNQKYRDGSLYTFYKTSA
                     QNRSDALDINNTSRFTVADNELEFMLGSKLMRTRYDRTIHSAAGDPKANQESIENNPF
                     APSGQQDISALYTGLKVTRGIWEADFNLNYTRNRITGYKPACDSRVICVPQGSYDIDD
                     KEGGFNPSVQLSAQVTPWLQPFIGYSKSMRAPNIQEMFFSNSGGASMNPFLKPERAET
                     WQAGFNIDTRDLLVEQDALRFKALAYRSRIQNYIYSESYLVCSGGRKCSMAEVIGNDW
                     EGISDEYSDNMYIYVNSASDVIAKGFELEMDYDAGFAFGRLSFSQQQTDQPTSIASTY
                     FGAGDMTELPRKYMTLDTGVRFFDNALTLGTIIKYTGKARRLSPDFEQDEHTGAIIKQ
                     DLPQIPTIIDLYGTYEYNRNLTLKLSVQNLMNRDYSEALNKLNMMPGLGDESHPANSA
                     RGRTWIFGGDIRF"
     gene            4454..5629
                     /gene="senB"
                     /locus_tag="JNZ89_003416"
     CDS             4454..5629
                     /gene="senB"
                     /locus_tag="JNZ89_003416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterotoxin production-related protein TieB"
                     /protein_id="HAY8937178.1"
                     /translation="MNIFTLSKAPLYLLISLFLPTMAMAIDPPERELSRFALKTNYLQ
                     SPDEGVYELAFDNASKKVFAAVTDRVNREANKGYLYSFNSDSLKVENKYTMPYRAFSL
                     AINQDKHQLYIGHTQSASLRISMFDTPTGKLVRTSDRLSFKAANAADSRFEHLRHMVY
                     SQDSDTLFVSYSNMLKTAEGMKPLHKLLMLDGTTLALKGEVKDAYKGTAYGLTMDEKT
                     QKIYVGGRDYINEIDAKNQTLLRTIPLKDPRPQITSVQNLAVDSASDRAFVVVFDHDD
                     RSGTKDGLYIFDLRDGKQLGYVHTGAGANAVKYNPKYNELYVTNFTSGTISVVDATKY
                     SITREFNMPVYPNQMVLSDDMDTLYIGIKEGFNRDWDPDVFVEGAKERILSIDLKKS"
     gene            complement(6002..6190)
                     /locus_tag="JNZ89_003417"
                     /pseudo
     CDS             complement(6002..6190)
                     /locus_tag="JNZ89_003417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000198547.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6154..6438
                     /locus_tag="JNZ89_003418"
     CDS             6154..6438
                     /locus_tag="JNZ89_003418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY8937179.1"
                     /translation="MHSTLSPLVPVYPVFITVIADHDKPQPSGCLLESQGSLCPICRQ
                     RITHETGWNVHHKVKKVMGGGEELSNLVLLHPNCHRQLHSCEAGSLKKGL"
     gene            6581..6802
                     /locus_tag="JNZ89_003419"
                     /pseudo
     CDS             6581..6802
                     /locus_tag="JNZ89_003419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(6823..6885)
                     /locus_tag="JNZ89_003420"
                     /pseudo
     CDS             complement(6823..6885)
                     /locus_tag="JNZ89_003420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            7336..8748
                     /gene="ospC1"
                     /locus_tag="JNZ89_003421"
     CDS             7336..8748
                     /gene="ospC1"
                     /locus_tag="JNZ89_003421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC1"
                     /protein_id="HAY8937180.1"
                     /translation="MNISETLNSANTQCNIDSMDNRLHTLFPKVTSVRNAAQQTMPDE
                     KNLKDSANIIKDFFRKTIAAQSYSRMFSQGSNFKSLNIAIDAPSDAKASFKAIEHLDR
                     LSKHYISEIREKLHPLSAEELNLLSLIINSDLIFRHQSNSDLSDKILNIKSFNKIQSE
                     GICTKRNTYADDIKKIANHDFVFFGVEISSHQKKHPLNTKHHTVDFGANAYIIDHDSP
                     YGYMTLTDHFDNAIPPVFYHEHQSFLDKFSEVNKEVSRYVHGSKGIIDVPIFNTKDMK
                     LGLGLYLIDFIRKSEDQSFKEFCYGKNLAPVDLDRIINFVFQPEYHIPRMVSTENFKK
                     VKIREISLEEAVTASNYEEINKQVTNKKIALQTLFLSITNQKEDVALYILSNFEITRQ
                     DVISIKHELYDIEYLLSAHNSSCKVLEYFINKGLVDVNTKFKKTNSGDCMLDNAIKYE
                     NAEMIKLLLKYGATSDNKYI"
     gene            complement(8852..9000)
                     /locus_tag="JNZ89_003422"
                     /pseudo
     CDS             complement(8852..9000)
                     /locus_tag="JNZ89_003422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            9076..10773
                     /gene="ospD3"
                     /locus_tag="JNZ89_003423"
     CDS             9076..10773
                     /gene="ospD3"
                     /locus_tag="JNZ89_003423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector OspD3"
                     /protein_id="HAY8937181.1"
                     /translation="MPSVNLIPSRKICLQNMINKDNVSVETIQSLLHSKQLPYFSDKR
                     SFLLNLNCQVTDHSGKLIVCRHLASYWIAQFNKSSGHVDYHHFAFPDEIKNYVSVSEE
                     EKAINVPAIIYFVENGSWGDIIFYIFNEMIFHSEKSRALEISTSNHNMALGLKIKETK
                     NGGDFVIQLYDPNHTATHLRAEFNKFNLAKIKKLTVDNFLDEKHQKCYGLISDGMSIF
                     VDRHTPTSMSSIIRWPNNLLHPKVIYHAMRMGLTELIQKVTRVVQLSDLSDNTLELLL
                     AAKNDDGLSGLLLALQNGHSDTILAYGELLETSGLNLDKTVELLTAEGMGGRISGLSQ
                     ALQNGHAETIKTYGRLLKKRAINIEYNKLKNLLTAYYYDEVHRQIPGLMFALQNGHAD
                     AIRAYGELILSPPLLNSEDIVNLLASRRYDNVPGLLLALNNGQADAILAYGDILNEAK
                     LNLDKKAELLEAKDSNGLSGLFVALHNGCVETIIAYGKILHTADLTPHQASKLLAAEG
                     PNGVSGLIIAFQNRNFEAIKTYMGIIKNENITPEEIAEHLDKKNGSDFLEIMKNIKI"
BASE COUNT         3388 a         2295 c         2299 g         2914 t
ORIGIN      
        1 ttttcttcga catgtacatc aggcgcggaa ctcatcgggg cgcgggaatg aaatcccatt
       61 cagactccgg atagattcaa gcaagcccac ttatcgtcaa aatcggtgtt gcaaaaacgg
      121 gagtgaccat agatccgttt tccaagcgga ccccataata tcggctggta aacatcactc
      181 gctagtgcat tctttttgtt ggtaatgata attatttaca tttattcttt gatgttttat
      241 cataattaat gttttatcaa taaatatatg gaaatatatt gtttcagatg ggaatatgag
      301 aaagttcatc cttatttcta tgataacgtt agctagtgtt agtctgggag cctgcagaca
      361 gaatgtcacc ataaagcagg atgcgccagg gcagaaagct ttcctgattg acgggcagat
      421 ttacgatttg cacagtggca aaattatttc tagcagcgag cttttggcgg atcttgctac
      481 cgctcgacat cttattattg gtgaaaaaca cgataatgcc gagcatcatc agattgagct
      541 ttggcttatt caaaatctgc tcatccagcg accacagggg agtgtgttgc ttgagatgtt
      601 gacgtcagac caacagcccc gagttaacca agttaaatgt tggctgaaag ataatcctgt
      661 ggttcgagat agccgtgttc aggaactact taactggcaa aaagggtggt cctgggagat
      721 gtatggcgac atcgtcatgc agctattacg tgggccttac ccgctgctca atgccaacat
      781 tggccgggag cagatgttgg cactgtacaa aaaaaacgaa tttcctaaag gaaaaaaatc
      841 cactgcacct gtggtacaag aagctctgcg tgaaaccatc atagctatgc atgaaggcaa
      901 ccttgaaagc cagcaactga cgtcaatgct ctctgttcag cagcagcggg atcgctacat
      961 ggcccgccag cttctgagtg ccccggtacc gtcgttgttg attgcaggtg gttatcacgc
     1021 gtcaaaaaac atgggcgtac cgttacacat ggaagatctt gccaccggca cccatccagt
     1081 ggtgttgatg cttgcagaaa aaggaatgaa catcacagta gatcatgctg actacgtgtg
     1141 gtttgtagcg ccagatacaa caaaaaggta aaccatggat gatgaatatt ctccacttcc
     1201 cacagtcggt aaaatggagc agctggttta tctgttctct actgcttcat ggactgattt
     1261 tccttacgtt tatctggcgt ttttccgaag ttcagcccgc tatgtctcct gcaccggcga
     1321 tcatgctgca atgggcagaa attatagagg ctccttcttc tccactttcg cttccggtgg
     1381 gaatcgctca acaggagtcc gcagtgacag aagaaaagca acaaactgag gacagacaac
     1441 aacgtcctgt cactgaagac agtgatgcaa ccattgaaat aactaggaag aaaaagtcat
     1501 ccgatggaga aaagaaaaag acacgtccac ctcgtaagat aaaggctcaa accagcgaca
     1561 gcaaccccac agccgtttcc agtaatgctg cacctcaggc tctggtcgaa tcgtcccgta
     1621 ttgctgcgcc ttttaacagt gactcaacaa agcgagataa ttctgaggca tcttgggaaa
     1681 gcagagtaaa aggccacctt aaccgttata aacgttaccc tggcgatgcc agaaaacgtg
     1741 cacgaaccgg cacagccgtt gtgactttta ccgtaaacac ggaaggcact attgtcagta
     1801 gtttcttgga aatctcgtca ggaacccttt ctcttgaccg cgaagctatt gctgttttag
     1861 aacgcgctca accacttccc aaaccaccgc ctgaaatatt ggagggagga ttatttaaag
     1921 taaaaatgcc gattaccttt aagttgaagg agtaaaggga taattggccg ttcaagttca
     1981 tttaactgaa atttaatttt catttttatg ctgaacattt tatcaaactt ttccactgtc
     2041 gaaaaaatca aaaagacagt agatcataat taataaacaa atagttatac ttatctttat
     2101 taatattata tccaaggaaa tttatgaacg ttataaaact ggctatcggc tcaggcatat
     2161 tattgctcag ctgcggtgct tactcacaat ccatcagtga aaaaactaat tccgacaaaa
     2221 aaggagcggc agaattcagt ccgctcagcg tttctgtcgg gaagacgacc agtgagcagg
     2281 aagctctcga gaaaacaggc gcgaccagtt cccggacaac ggacaaaaac ctgcaatcac
     2341 ttgacgcaac agtgcgtagt atgcctggta cttatactca aatagatcct ggtcagggag
     2401 caatcagtgt gaatattcga ggcatgagcg gatttggtcg tgtaaacact atggtcgatg
     2461 gtattaccca gagtttttac ggaacctcta cctccggaac aacggcgcat ggttcaacta
     2521 acaatatggc tggcgtactt atagatccta acttactggt agcagttgat gttacacgcg
     2581 gtgacagcag tggctctgaa gggatcaacg cccttgccgg tagtgcaaat atgcgtacta
     2641 ttggcgttga cgatgtaata tttaacggta atacatatgg ccttcgttca cgtttctctg
     2701 tcggtagtaa tgggctggga cgcagcggaa tgatcgccct tggtggaaaa agcgacgctt
     2761 ttacggatac gggaagcatt ggcgttatgg ctgctgtgag tggcagttct gtgtactcta
     2821 atttctcaaa tggttctgga attaacagca aagagtttgg ttatgataaa tatatgaagc
     2881 agaaccccaa atcccaactg tataaaatgg atatcagacc agacgaattt aacagcttcg
     2941 aactttccgc tcgaacctat gaaaataaat ttacacgtcg tgatataacc agtgacgact
     3001 attacattaa atatcattac accccttttt ctgaattaat tgactttaac gtaacggcca
     3061 gtaccagtcg cggtaatcaa aagtatcgtg atggctcgct gtatactttc tacaaaacct
     3121 cagcgcaaaa tcgttctgac gcgctggata tcaacaatac cagccggttc actgtcgcgg
     3181 acaatgaact ggagtttatg ctgggcagca aactgatgcg tacccgctat gaccggacca
     3241 ttcactcagc ggcgggcgac ccgaaagcga atcaggaatc gatcgagaac aatccgttcg
     3301 caccctccgg ccagcaggat atttcagcgc tgtataccgg gctgaaggtt acgcgcggca
     3361 tctgggaggc agatttcaat ctcaactaca cacgtaacag gatcacaggg tacaagcccg
     3421 cctgcgattc acgcgttatc tgcgtgccac agggtagcta cgatattgac gataaagagg
     3481 gtggcttcaa cccttcagtt cagctttctg ctcaggtaac accatggctt cagccgttca
     3541 ttggctacag caaatccatg cgcgccccga acatccagga gatgttcttc tctaattcag
     3601 gaggcgcatc catgaaccca ttcctgaagc ctgaacgtgc agaaacctgg caggcgggtt
     3661 ttaacattga taccagagat ttactggtcg aacaggatgc cctgcgcttt aaggctctgg
     3721 cgtaccgcag caggatccag aactacatct acagcgagtc ttatctggtt tgttctggag
     3781 gtcgtaaatg cagtatggct gaggtgattg gcaatgactg ggagggcatt agcgatgaat
     3841 acagcgacaa tatgtacatc tacgttaact cggcaagcga cgttattgca aagggcttcg
     3901 aactggagat ggattatgat gcaggttttg cttttggccg actctctttc agccagcagc
     3961 aaacagacca gccaacctcc atcgccagca cctactttgg cgcaggggat atgaccgaac
     4021 tgcccagaaa atacatgacg ctggatactg gtgttcgctt cttcgataac gcgttgaccc
     4081 tgggcactat cataaaatac acaggcaagg ctcgtcgcct gtcgcctgat tttgagcagg
     4141 acgaacatac cggcgcaata atcaaacagg atttgccgca gatcccaacg attatcgatc
     4201 tctatggtac ttacgagtac aaccgcaacc tgacactgaa actttcggta caaaacctga
     4261 tgaacagaga ttattcggag gcgctgaata agctcaacat gatgccaggt cttggtgacg
     4321 agagccaccc agccaattcc gcgcgtggca gaacatggat atttggcggg gacattcgtt
     4381 tctgatgaca atttccgcca ggttcagaca atacgttttc tctcttatgt caattttatt
     4441 gcaggaacga aaaatgaata ttttcacttt atccaaagca ccgctatact tgttaatttc
     4501 actattttta cccacgatgg ccatggctat cgatccacct gaacgcgaac tttcgcgatt
     4561 tgccctgaaa acgaattacc ttcagtcccc tgatgaaggc gtctatgaac tggcgtttga
     4621 taatgccagt aaaaaggtgt ttgcagcagt caccgatcgt gtaaatcgtg aagccaataa
     4681 aggctatctg tattcgttta attcagattc gctgaaagtc gaaaataaat acacgatgcc
     4741 ataccgggca ttttcgctgg cgataaatca ggataaacat cagctctata tcggacacac
     4801 ccagtcagcg tccctgcgta tcagtatgtt tgacacccca accggtaaac tggtaagaac
     4861 cagcgacagg ttaagtttta aagcggcaaa cgctgcagat tcgcgttttg agcatttgcg
     4921 ccatatggtt tacagccagg attccgatac cctgtttgtg agttatagca atatgctgaa
     4981 aacggccgag ggcatgaagc ctctgcataa gctgttaatg ctcgacggga cgacgcttgc
     5041 cttaaaaggc gaggttaagg atgcttacaa aggtacagcg tatggtctga cgatggatga
     5101 aaaaacacag aaaatctacg ttggcggaag agattacatc aacgaaattg atgcgaaaaa
     5161 tcagacgctg ctgcgtacca tcccgttgaa agatccgaga ccacaaatca caagtgtgca
     5221 gaatctggcg gtggactccg cttctgaccg tgcctttgtg gtggtattcg accatgacga
     5281 tcgttccggt acaaaagatg gcctctatat ttttgactta cgcgacggta aacagcttgg
     5341 ctatgtgcac acaggagccg gagctaacgc ggtgaaatac aatccgaaat ataacgaact
     5401 gtatgtcacc aacttcacta gcggcaccat cagcgtagtg gatgccacca aatacagcat
     5461 cacccgtgaa tttaacatgc cggtctaccc aaaccagatg gtgttgtcgg acgatatgga
     5521 taccctttac attggcatca aagaaggctt taaccgcgat tgggatcctg atgtgtttgt
     5581 ggaaggagct aaagaacgta ttctgagcat tgatttgaaa aagtcgtgat cgggggaaaa
     5641 aacatgggat aaaaactccg ttattccact aaactggccg gactaggaaa agcaaacatc
     5701 tctgtcctgc cggtacgcct gttacgccgc tccatgaggc tgaggaatct ccagaaaacg
     5761 agacaggcac agcattgtac gatcaactga tttgtgccaa taattcaatg aaatcacagc
     5821 tatgcctgtt cacgtatagg aaattgaaaa actaagcgat accactgtcc gcgtcttatg
     5881 cctcgtgcgg taagctgttt ttcacatcac gccggtgttt ttttctttct gtggacggtt
     5941 ttaatactgt aatcggccgt tttttatact taccccgatt cccgggcgca cttatcctgc
     6001 atcaccccgg gatatacctc agcagactga tatcccgcgc gtttttcttc agcccctcca
     6061 cattcagtcc cgcgatggcc cggcggtata ccatccggcc gccacacagc acgcattcga
     6121 acgggtcacg actcaggaac tgtttcacca tttgtgcata gcacactttc gccactggtt
     6181 ccggtttatc ctgtttttat aacggtaatt gcagaccatg acaaaccgca gccgtcaggc
     6241 tgcctactcg agtcacaagg ctctctgtgt ccgatatgcc ggcagcgcat tacccatgaa
     6301 actggctgga acgtacacca taaggtgaag aaagttatgg ggggcggtga agaattatct
     6361 aaccttgtct tgttacatcc aaattgccat cgacagttac acagttgtga agccggctct
     6421 ctcaaaaagg gcttataaag gcttgagcgg tgtaccggga aaccggtatg caccgttctt
     6481 aggggagggc agtccagcaa tgaactgtcc ttacccgaca aacatccaaa acgaacggaa
     6541 cgtgctggaa tccgcatata acccgttgta aagtgaggaa atggacacct cacttgctca
     6601 tgagaacgcc cgcctgcggg cactgttgca gacgcaacag gacactatcc accagatggc
     6661 tgaatacaac cgcctgctct cacagcggat ggcggcttat gcttccgaaa tcaaccgact
     6721 gaaggcgctg gttgcgaaac tgcagcgtat gcagttcggt aaaagcccag aaaaacttcg
     6781 cgcaaaaacc gaacggcaga ttccattttc acgggcgatc tacgccacac aggctctggg
     6841 ttgcagtgac tgctccatta aggcgatttt gaactcataa gggaagtaac aaaaaaactg
     6901 caaaagtaca ataattatat atggccaaac taacctctat taaaaaaaca tcagtttttc
     6961 acacttagtt gagcttcatg aaaaaatcat cgaggatttc attgcagaat acacattcca
     7021 ctaactggaa gcactccata agaggaatca gagaaagtat cgttttttta tagtaaaatt
     7081 cattgctgtt caataaaatt gatataatta ttaaattatg gaaataattt cacaaaaaag
     7141 attaacttga gttcttaagc atcggatttt agatattttg aaatatctgg catcacataa
     7201 catcaaaagt atataatacc cttatctaat tacatgcagt atattgtata tatactcaaa
     7261 aattgtaatt cataccctac tatatcttgt ggggaaagat attaattaaa actgttttca
     7321 tataaggttc attttatgaa tatatcagaa acactgaact cagcaaatac ccaatgcaat
     7381 atagattcta tggataacag attacataca ttgtttccaa aagtgacatc agtgcgaaac
     7441 gctgcacaac aaactatgcc agatgaaaaa aatttaaaag atagtgcaaa tattattaaa
     7501 gatttcttta ggaaaactat agcagcacaa agttatagta gaatgttctc tcaaggctct
     7561 aactttaaat ctttaaatat agcaattgat gcaccatcag acgctaaagc ctcatttaag
     7621 gctattgagc accttgacag attatcgaag cattatatat ctgaaataag ggaaaaactt
     7681 catcctcttt ctgcagagga actcaatttg ctttcgctaa ttattaattc tgatttaatc
     7741 ttcagacatc aaagtaattc tgatttgtct gataaaattt taaacattaa gtcattcaat
     7801 aaaattcagt ctgaaggaat atgcacaaaa cgaaacacat acgctgatga tataaaaaaa
     7861 atagctaatc atgactttgt gttttttggc gttgaaatct ctagccatca gaaaaaacac
     7921 cccctgaata caaaacatca cactgttgat tttggtgcaa atgcgtatat cattgatcat
     7981 gactctccat atggatatat gacattaacc gatcactttg ataatgctat tccacctgtt
     8041 ttttaccatg agcaccaatc atttttagat aaattttcag aggttaataa agaagttagt
     8101 cgatacgtac atggaagtaa aggaattata gatgtaccaa tattcaatac taaagatatg
     8161 aagttagggc tcggattata cctgattgac tttattagaa aaagtgaaga ccaaagcttc
     8221 aaggagtttt gctatggaaa aaatcttgcc cctgtggatc tggatagaat cataaacttt
     8281 gtttttcagc cagagtacca tatacctagg atggtaagta cagaaaactt caaaaaagtt
     8341 aagattagag aaatatcctt agaggaggct gttacagcat ctaattacga agaaattaac
     8401 aagcaggtca ctaacaaaaa aattgctctc cagactcttt ttctttcgat tactaatcaa
     8461 aaagaggatg tcgccttata tatattatct aattttgaga taactagaca agatgttatt
     8521 tccataaagc atgagttgta tgatattgag tatctactta gcgctcataa ttcaagctgt
     8581 aaagtacttg agtattttat caataaggga ttggttgatg taaacacaaa gttcaaaaaa
     8641 actaatagtg gggattgtat gttggataac gcaataaaat atgagaatgc agaaatgata
     8701 aaactattat tgaaatatgg tgcaacatct gacaataaat atatttaatc aaaattgaat
     8761 atcgtttagc aaaaggcagt atttgcacaa aatatcgata tattgtttat tgtcagtatg
     8821 gctcaatgtg ataatagttg gaaagtttga tgggtttcgc cccgttgtag cggtagtcga
     8881 gctggaaggt cttcaggcac tgcttacagc gatagagcag cccccctgaa ctggaatggc
     8941 cgttccggat accccctgag tttcagagta acggggacaa accacatcaa tctttgccat
     9001 caatcatcca aagggcaaag agtacaacaa cactaagtct gcgtcacaac ccatcaatga
     9061 aaggaatata tacatatgcc atcagtaaat ttaatcccat caaggaaaat atgtttgcaa
     9121 aatatgataa ataaagacaa cgtctctgtt gagacaatcc agtctctatt gcactcaaaa
     9181 caattgccat atttttctga caagaggagt tttttattaa atctaaattg ccaagttacc
     9241 gatcactctg gaaaacttat tgtctgtcga cacttagctt cctactggat agcacagttt
     9301 aacaaaagta gtggtcacgt ggattatcat cactttgctt ttccggatga aattaaaaat
     9361 tatgtttcag tgagtgaaga agaaaaggct attaatgtgc ctgctattat ttattttgtt
     9421 gaaaacggtt catggggaga tattattttt tatattttca atgaaatgat ttttcattcc
     9481 gaaaaaagca gagcactaga aataagtaca tcaaatcaca atatggcatt aggcttgaag
     9541 attaaagaaa ctaaaaatgg gggggatttt gtcattcagc tttatgatcc caaccataca
     9601 gcaactcatt tacgagcaga gtttaacaaa tttaacttag ctaaaataaa aaaactgact
     9661 gtagataatt ttcttgatga aaaacatcag aaatgttatg gtcttatatc cgacggtatg
     9721 tctatatttg tggacagaca tactccaaca agcatgtcct ccataatcag atggcctaat
     9781 aatttacttc accccaaagt tatttatcac gcgatgcgta tgggattgac tgagctaatc
     9841 caaaaagtaa caagagtcgt acaactatct gacctttcag acaatacgtt agaattactt
     9901 ttggcagcca aaaatgacga tggtttgtca ggattgcttt tagctttaca aaatgggcat
     9961 tcagatacaa tcttagcata cggagaactc ctggaaactt ctggacttaa ccttgataaa
    10021 acggtagaac tactaactgc ggaaggaatg ggaggacgaa tatcgggttt atcccaagca
    10081 cttcaaaatg ggcatgcaga aactatcaaa acatacggaa ggcttctcaa gaagagagca
    10141 ataaatatcg aatacaataa gctgaaaaat ttgctgaccg cttattatta tgatgaagta
    10201 cacagacaga tacccggact aatgtttgct cttcaaaatg gacatgcaga tgctatacgc
    10261 gcatacggtg agctcattct tagcccccct ctcctcaact cagaggatat tgtaaatttg
    10321 ctggcctcaa ggagatatga caatgttccc ggacttctgt tagcattgaa taatggacag
    10381 gctgatgcaa tcttagctta tggtgatatc ttgaatgagg caaaacttaa cttggataaa
    10441 aaagcagagc tgttagaagc gaaagattct aatggtttat ctggattgtt tgtagccttg
    10501 cataatggat gtgtagaaac aattattgct tatgggaaaa tacttcacac tgcagacctt
    10561 actccacatc aggcatcaaa attactggca gcagaaggcc caaatggggt atctggatta
    10621 attatagctt ttcaaaatag gaattttgag gcaataaaaa cttatatggg aataataaaa
    10681 aatgaaaata ttacacctga agaaatagca gaacacttgg acaaaaaaaa tggaagtgat
    10741 tttctagaaa ttatgaagaa tataaaaatc tgaatattat ctcgtggtga tacactgaat
    10801 ttgaggtaac cggctcattt aaaccgtctg gtctgttacc tccggttcca caaaaataat
    10861 gtccatcatt ttgaagtgga cactatcgta tggaat
//
LOCUS       DADMIB010000146        10859 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.147, whole genome shotgun sequence.
ACCESSION   DADMIB010000146 DADMIB010000000
VERSION     DADMIB010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10859
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.147"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            83..424
                     /locus_tag="JNZ89_003424"
     CDS             83..424
                     /locus_tag="JNZ89_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flxA-like family protein"
                     /protein_id="HAY8937182.1"
                     /translation="MATISSTSIPSIQTQSSNRASQGSDVASQIARISQQIIKLTQQI
                     KEIVDTSGSAEDKQKQAELIQQQITLLETQLAQLQKQQAEKAQEKEQRLSLDVSLLNP
                     VEKTTHIDIYI"
     gene            complement(415..1341)
                     /locus_tag="JNZ89_003425"
     CDS             complement(415..1341)
                     /locus_tag="JNZ89_003425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8937183.1"
                     /translation="MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH
                     TGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT
                     ISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCE
                     AILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN
                     IVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNR
                     SLSTAAEALWDVVRDQGNALMAGREGDPLYQI"
     gene            1431..2429
                     /locus_tag="JNZ89_003426"
     CDS             1431..2429
                     /locus_tag="JNZ89_003426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HAY8937184.1"
                     /translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL
                     LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGF
                     LYLCTLPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGS
                     LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN
                     GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANG
                     IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA"
     gene            complement(2426..2644)
                     /locus_tag="JNZ89_003427"
     CDS             complement(2426..2644)
                     /locus_tag="JNZ89_003427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937185.1"
                     /translation="MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAG
                     KLGELMQITLLIKTEGLTQLVQPLKRPL"
     gene            complement(2646..4661)
                     /gene="ligA"
                     /locus_tag="JNZ89_003428"
     CDS             complement(2646..4661)
                     /gene="ligA"
                     /locus_tag="JNZ89_003428"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HAY8937186.1"
                     /translation="MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE
                     LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
                     KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
                     GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR
                     PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED
                     RPTLGFDIDGVVIKVNSLEQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
                     GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
                     SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD
                     VDGMGDKIIDQLLEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF
                     ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE
                     ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
                     GAKVAGSVSKKTDLVIVGEAAGSKLAKAQELGIEVIDEAEMLRLLGS"
     gene            complement(4732..5718)
                     /gene="zipA"
                     /locus_tag="JNZ89_003429"
     CDS             complement(4732..5718)
                     /gene="zipA"
                     /locus_tag="JNZ89_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HAY8937187.1"
                     /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
                     KSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPR
                     QPVQQPPEAQVPPQHAPRPAQPVQQPVYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPA
                     QQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQ
                     AGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYG
                     DELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA"
     gene            5948..6709
                     /gene="cysZ"
                     /locus_tag="JNZ89_003430"
     CDS             5948..6709
                     /gene="cysZ"
                     /locus_tag="JNZ89_003430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HAY8937188.1"
                     /translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG
                     GAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP
                     FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIP
                     GIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSL
                     FTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR"
     gene            6894..7865
                     /gene="cysK"
                     /locus_tag="JNZ89_003431"
     CDS             6894..7865
                     /gene="cysK"
                     /locus_tag="JNZ89_003431"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HAY8937189.1"
                     /translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
                     IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
                     LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE
                     IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGE
                     EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA
                     AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
     gene            8249..8506
                     /gene="ptsH"
                     /locus_tag="JNZ89_003432"
     CDS             8249..8506
                     /gene="ptsH"
                     /locus_tag="JNZ89_003432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HAY8937190.1"
                     /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
                     KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
     gene            8551..10278
                     /gene="ptsI"
                     /locus_tag="JNZ89_003433"
     CDS             8551..10278
                     /gene="ptsI"
                     /locus_tag="JNZ89_003433"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HAY8937191.1"
                     /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFL
                     SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
                     AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA
                     ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL
                     ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
                     TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
                     DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRKEILRDQLRAILRASAFGKLRIMFPM
                     IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
                     IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
                     KFIEEKTIC"
     gene            10319..10828
                     /gene="crr"
                     /locus_tag="JNZ89_003434"
     CDS             10319..10828
                     /gene="crr"
                     /locus_tag="JNZ89_003434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HAY8937192.1"
                     /translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE
                     KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE
                     GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLPGSVTVG
                     ETPVIRIKK"
BASE COUNT         2649 a         2803 c         2688 g         2719 t
ORIGIN      
        1 tgcgatttgt aagattgatt tttcttctca agttccttgt tcttctaccg atattacctc
       61 gtacagtgac gaggactgaa caatggccac tatctcttca acttcaattc cttccataca
      121 aacacagagt agtaacaggg catcacaagg tagcgatgtt gcttcacaaa tcgcgcggat
      181 aagtcagcaa atcatcaaac tcactcaaca aattaaagag attgtagaca ctagcggcag
      241 tgctgaagac aagcaaaaac aggccgaatt gattcaacag caaatcaccc tactggaaac
      301 acaactggcg cagttgcaga aacagcaggc agaaaaggcg caggagaaag agcagcgttt
      361 gtctctggat gtatcccttc taaatcctgt tgaaaaaacg actcatatcg atatctatat
      421 ctgatacaac ggatcccctt cccgaccagc cattagcgca ttgccctggt ctcgtaccac
      481 gtcccataac gcttcagcgg cggtggaaag tgaacggttc ttcctgcgca ccagcatcaa
      541 ctggcgttca acaaccggcg taatgcgctt taccaccagt gggctacctt caggcaatgg
      601 tagcgccagt gcgggaagaa tactgatgcc gatgcctgcg gctaccatcg ggaacagcgt
      661 cgccggatgt ccaatctcct gcacaatatt cgcctgaata ccattgcgcg ccagcgctgc
      721 gtcaatcagc ggtcggctgc ctgacgcgta atcctgcaac accaatttcg ctccctgtaa
      781 tgcctgccag ggtacataat cttccacggc caaagcgcta tcgcgatggc aaagcagaaa
      841 gaaaggctcg gaaagaatcg cttcacattg cagatcgccc actgggcctg gatcgatgac
      901 gatgccaaag tcgacatctc cctggcgaat actttccatc acccactgct gcggacgatc
      961 gtgcaggaca aactgaatat ctggatagcg gcgatggctt tcagcaatgc attgcggaat
     1021 aagatgcgcg gaaatggtct ggctggcagc gacccgaact tttccgctca gttgttgccc
     1081 catacgcccg gtatcgcgca acgtgctgtt aagttcatcc agcagtcgct caagacgcaa
     1141 agccaactgc tgccctgcat ctgtaagcac cacttcacgc gtggttctgt ccagcaggcg
     1201 aacaccagta tgattttcca gctccttcac actgtgactt actgccgact ggctcaagcc
     1261 gatacgctct cctgcacgac taaaactttt ctcctgcgct actgtgacga aaacctttaa
     1321 ttgttttaaa gaataattca tctgttttct tcatgaatgg atgcaataaa tcaattttat
     1381 ttctcaaact ggaagaagca caatagaacc atcgatcatc tggagtcttt atgaaacttt
     1441 ttcgtatcct cgatcctttc accttaaccc tgatcacggt ggtgttgctg gcctctttct
     1501 ttccggccag aggcgatttc gtccccttct ttgaaaatct gaccaccgca gctattgccc
     1561 tgctgttctt tatgcacggc gcgaagttgt cgcgtgaggc gattattgct ggcggtggtc
     1621 actggcgact gcatttgtgg gtaatgtgca gcaccttcgt gctgtttccg attctgggtg
     1681 tactgtttgc ctggtggaaa ccggtaaatg tcgacccgat gctctactcc ggttttctct
     1741 acttgtgcac tctcccggct accgtgcagt ctgcaatcgc cttcacgtca atggcgggcg
     1801 gtaacgtcgc ggcggcggtt tgttctgcgt cagcatccag cctgctggga attttccttt
     1861 caccattgct ggttggtctg gtgatgaatg ttcacggtgc agggggcagc cttgagcagg
     1921 tcggtaaaat tatgctgcaa ctgctgctgc cgtttgtgtt ggggcatctt tcccggccgt
     1981 ggattggtga ctgggtgtcg cgcaataaaa aatggattgc gaaaactgac cagacgtcca
     2041 ttctgttggt ggtttataca gcgttcagcg aagccgtcgt taatggtatc tggcataaag
     2101 ttggctgggg atcattgctg tttatcgtgg tggtcagctg cgttcttctg gctatcgtga
     2161 ttgtagttaa cgtctttatg gcacgccgac tgggcttcaa taaggcagat gaaattacta
     2221 tcgtcttttg tggttcgaaa aagagtctgg caaatggcat cccgatggca aacattctgt
     2281 tccccacatc ggtgatcggt atgatggtgc tgcccctgat gattttccat cagatccaat
     2341 tgatggtctg tgcggtgctg gcgcgtcgat acaaacgcca gaccgaacag ttacaggcgc
     2401 agcaggaaag cagcgccgat aaagcttaaa gcggacgctt caggggctgg accagttgcg
     2461 tcagcccctc ggttttaatc agcagcgtga tttgcattag ctcaccgagc ttccctgccg
     2521 ggaactcatc tttgcgggca aaccacagca gatactcctc cggcaggtcg attaagcgac
     2581 gccctttgta tttgccaaac ggcattatcg tattggctat ttcaatcagc tgctcttttt
     2641 ccatctcagc tacccagcaa acgcagcatt tccgcttcgt cgatgacttc aatgcccagt
     2701 tcctgcgcct tcgccagttt agatcctgca gcttcaccca caatcaccag atcggttttc
     2761 ttcgacacgc tgcccgcgac tttcgcgccc agttcgacca gtcgagcttt agcgtcatca
     2821 cgcgacatct ggcttaagct gcccgtaagc accacggttt taccagcaaa cgggctgtca
     2881 atctcttccg cgttgataac gatcggcgca ggccagtgaa caccttccgc caacagctcg
     2941 ctgatgacat tgcggttgct ttcttcggca aagaagttgt gaacgtggga tgcaacgaca
     3001 atgccaacat caggcacctt ttgcagctct tcaatcgaag cggcttccag cgcttccagc
     3061 gtgccgaaat atgccgccag acctgctgcg gtggcctcgc cgacttcacg gatgccaagt
     3121 gcatagagga agcgagcaaa ggtggtttct ttcgcttttt ccagcgcgtt aaccacgttt
     3181 tgtgccgatt ttggccccat acgctccagt ccggtcagtt tgcctgcggt gagtttgaac
     3241 agatctgccg gagtgtggac atattctttt tcaagcagct gatcgatgat tttgtcgccc
     3301 attccgtcaa catccatcgc acggcgggaa acaaagtgtt tcagcgactc tttacgctgc
     3361 gcaccgcaaa tcaggccacc ggtacagcgg gcaaccgctt caccttccac acgctcaacg
     3421 tcagaaccac ataccggaca atgcgtcggg aatacaacct cacgggtatc ttccgggcgt
     3481 tcagaaagca cgacgttaac cacctgcggg atcacgtcgc cagcgcggcg aatcaccact
     3541 ttatcgccaa tgcgtaaacc aagacgttcg atttcatccg cattgtgtaa ggttgcgtta
     3601 ctcaccagca cgccagcaac atggacaggt tccagacgcg caacaggcgt aatcgcgcca
     3661 gtacgcccaa cctgaaactc gacgtcacgc acaaaggtca tctgctcctg cgccgggaat
     3721 ttaaacgcta ccgcccagcg cggggcacgc gcgacaaagc caagctgctc ctgctgttcc
     3781 agtgagttga ccttaatcac cacgccgtcg atatcaaagc ccagcgtcgg gcggtcttct
     3841 tccactttgt gatagaacgc cagcacttct tccgccgatt cacaaagcgt tacccgatcg
     3901 ctgaccggca acccccactt tttaaattgc agtaaacggc caagatgagt atccggcagc
     3961 tcgccacctt ccagaacacc aacgccatag cagaaaaaag tgagcggtcg cttcgctgta
     4021 atacgcggat caagctgacg cagtgaacca gctgccgcat tacgtgggtt agcaaaaact
     4081 ttcccgcccg tgcgtcgcgc atcttcgtta atcttttcga accccgcctg cggcaggaac
     4141 acttcaccac gcacttccag acgcgccggg atattctctc catgcagctt cagcggaatg
     4201 gcgcgaatag tacgcacatt agacgtgata tcttccccgg tggtgccatc gccacgggtc
     4261 gcggcactga ctaaaacgcc attttcatac agaatactga cggcaaggcc atccagcttc
     4321 agctcacagc accaggtgac tttctcgttg tttttcagac ggtcctgcac acgtttgttg
     4381 aaagcaagaa agctttcttc atcaaaaacg ttatccagtg acagcattgg tacttcatgg
     4441 cgtatctggc tgaaagccgc cagcggcgca gcacctacac gttgggtagg cgaatcaggc
     4501 gtaatcagtt ctggatgttt agtttccagc tcgcgcagtt cgcgcatcag cctgtcgtat
     4561 tcagcgtcgg gaatttccgg cgcatccatc acatgataaa gatattcatg atggcgaagc
     4621 gtcgttcgca gttctgtcag ttgttgttcg attgattcca tatcgcacca tcaatgctaa
     4681 aaacccccga caagcggggg ttcgaagaag agttaatttg ccttaagtgt atcaggcgtt
     4741 ggcgtctttg acttcgcgga tgatgtcctg gtactcgcgc aatttctgcg gagtcatcat
     4801 acggcgctga tcgtcaagca cgacaccgcc cacttcatcg gcaatatgct gcgcagattg
     4861 cagcatcagc ttgaagttct gcagctcgtc accgtaagac ggtacctgca taaagatagt
     4921 gacacccgga gtagtgaaat ccttcatttc aggatcaaag gttcccggtt tcaccatatt
     4981 cgccaggctg aataacgccg ggccgctgcc atccgggcta agatgacgat ggtaaatatt
     5041 catatcgcca aaaatgaagc ccgcttgttg aatgctgtta agaagcagtt caccgtttag
     5101 ctcgctaccg tgatgcgccg cgacgttcat gataatcacc gcttctttgc gcttcggttt
     5161 atccataact ggagccggtt ccgctacagg ctcaggctgt ggtgccgcta cgggttctgc
     5221 aggctggaaa gcctgttgtg ccggttgcgg tgctgaatgc acaggctgcg gcgctggcgc
     5281 gacctgtggc gaaactggct gctgcaacgg ctgttcaggc tgcggctgat agacaggctg
     5341 ctgcaccggc tgcgctggac gcggagcatg ttgcggcggt acctgcgctt caggcggctg
     5401 ctggaccggt tgacgcggct gcgcagacgc ataaggcggt tggtactggt gttgcggcga
     5461 cggacgagca gcctcatgct cctgagcgtt agccggggca tgattcacgc ggtgaacacg
     5521 aacctcacca acgccctcat catcttcgac atcctcgtca taagaatcgt cgtcacgttt
     5581 tgacttcatt cgttttaatg gccgatcgcg gaacatagaa gatcgttctt tacggctggt
     5641 ccagaaacca tgtaccagta aagcgattat ggcgatcgcg ccaacaatga ttaatatcag
     5701 acgcaaatcc tgcatcatta tattctctgt tgttctaaca ccttgccacc acggcaaaca
     5761 tttactcact aagagtattt gccgattacc tcaagtgcaa gtgcactatt aactttcaca
     5821 gcacaaagat agatgaaatc gtgctttttg ctgttttttc gaacatatcc taactgtcca
     5881 ttgcgcaatt acccggtaaa atacgcagaa ttttcctagg attggtcaaa aggagctcat
     5941 cctgattatg gtttcatcat tcacatctgc cccacgcagc ggtttttact attttgcgca
     6001 aggctggaag ctcgtctcgc aacctgggat tcggcgtttc gttattttac cgctgctggt
     6061 caatattttg ttgatggggg gcgcattctg gtggctcttt acacagctcg atgtctggat
     6121 cccgactctc atgagttacg ttccggactg gctacaatgg ctgagttatc tgttgtggcc
     6181 tctggctgtc atctctgtgc tgttagtgtt tggctatttc ttctccacga ttgctaactg
     6241 gattgccgct ccgtttaacg gtttattggc tgaacaactg gaagcacgat tgactggcgc
     6301 tacaccgcca gataccggga ttttcggtat catgaaagat gtgccgcgaa tcatgaaacg
     6361 cgaatggcaa aaatttgcct ggtatctgcc gcgcgcaatt gtattactaa ttctttactt
     6421 catccctggt attgggcaaa ccgtcgcgcc ggtactgtgg ttcctgttta gcgcctggat
     6481 gttagccatc cagtattgcg attacccctt cgataaccac aaagtgccgt ttaaagagat
     6541 gcgcaccgcc ctgcgcacac gcaaaatcac caatatgcag tttggtgctt taaccagcct
     6601 gtttacgatg atcccgctgc ttaatctgtt catcatgccc gttgccgttt gtggcgcgac
     6661 ggcgatgtgg gtcgattgct atcgcgataa acacgcgatg tggcggtaac aatctaccgg
     6721 ttattttgta aaccgtttgt gtgaaacagg ggtggcttat gccgcccctt attccatctt
     6781 gcatgtcatt atttcccttc tgtatataga tatgctaaat ccttacttcc gcatattctc
     6841 tgagcgggta tgctacctgt tgtatcccaa tttcatacag ttaaggacag gccatgagta
     6901 agatttttga agataactcg ctgactatcg gtcacacgcc gctggttcgc ctgaatcgca
     6961 tcggtaacgg acgcattctg gcgaaggtgg aatctcgtaa ccccagcttc agcgttaagt
     7021 gccgtatcgg tgccaacatg atttgggatg ccgaaaagcg cggcgtgctg aaaccaggcg
     7081 ttgaactggt tgaaccgacc agcggtaata ccgggattgc actggcctat gtagctgccg
     7141 ctcgcggtta caaactcacc ctgaccatgc cagaaaccat gagtattgaa cgccgcaagc
     7201 tgctgaaagc gttaggtgca aacctggtgc tgacggaagg tgctaaaggc atgaaaggcg
     7261 caatccaaaa agcagaagaa attgtcgcca gcaatccaga gaaatacctg ctgctgcaac
     7321 aattcagcaa tccggcaaac cctgaaattc acgaaaaaac caccggtccg gagatctggg
     7381 aagataccga cggtcaggtt gatgtattta ttgctggcgt tgggactggc ggtacgctga
     7441 ctggcgtcag ccgctacatt aaaggcacca aaggcaagac cgatcttatc tctgtcgccg
     7501 ttgagccaac cgattctcca gttatcgccc aggcgctggc aggtgaagag attaaacctg
     7561 gcccgcataa aattcagggt attggcgctg gttttatccc ggctaacctc gatctcaagc
     7621 tggtcgataa agtcattggc atcaccaatg aagaagccat ttctaccgcc cgtcgtctaa
     7681 tggaagaaga aggtattctt gcaggtatct cttctggagc agctgttgcc gcggcgttga
     7741 aactacaaga agatgaaagc tttaccaaca agaatattgt ggttattcta ccatcatcgg
     7801 gtgagcgtta tttaagcacc gcattgtttg ccgatctctt cactgagaaa gaattgcaac
     7861 agtaatgcca gcttgttaaa aatgcgtaaa aaagcacctt tttaggtgct tttttgtggc
     7921 ctgcttcaaa ctttcgcccc tcctggcatt gattcagcct gtcggaactg gtatttaacc
     7981 agactaatta ttttgatgcg cgaaattaat cgttacagga aaagccaaag ctgaatcgat
     8041 tttatgattt ggttcaattc ttcctttagc ggcataatgt ttaatgacgt acgaaacgtc
     8101 agcggtcaac acccgccagc aatggactgt attgcgctct tcgtgcgtcg cgtctattaa
     8161 aaactggcgc taacaataca ggctaaagtc gaaccgccag gctagacttt agttccacaa
     8221 cactaaacct ataagttggg gaaatacaat gttccagcaa gaagttacca ttacagctcc
     8281 gaacggtctg cacacccgcc ctgctgccca gtttgtaaaa gaagctaagg gcttcacttc
     8341 tgaaattact gtgacttcca acggcaaaag cgccagcgcg aaaagcctgt ttaaactgca
     8401 gactctgggc ctgactcaag gtaccgttgt gactatctcc gcagaaggcg aagacgagca
     8461 aaaagcggtt gaacatctgg ttaaactgat ggcggaactc gagtaatttc ccgggttctt
     8521 ttaaaaatca gtcacaagta aggtagggtt atgatttcag gcattttagc atccccgggt
     8581 atcgctttcg gtaaagctct gcttctgaaa gaagacgaaa ttgtcattga ccggaaaaaa
     8641 atttctgccg accaggttga tcaggaagtt gaacgttttc tgagcggtcg tgccaaggca
     8701 tcagcccagc tggaaacgat caaaacgaaa gctggtgaaa cgttcggtga agaaaaagaa
     8761 gccatctttg aagggcatat tatgctgctc gaagatgagg agctggagca ggaaatcata
     8821 gccctgatta aagataaaca catgacagct gacgcagctg ctcatgaagt tatcgaaggt
     8881 caggcttctg ccctggaaga gctggatgat gaatacctga aagaacgtgc ggctgacgta
     8941 cgtgatatcg gtaagcgcct gctgcgcaac atcctgggcc tgaagattat cgacctgagc
     9001 gccattcagg atgaagtcat tctggttgcc gctgacctga cgccgtccga aaccgcacag
     9061 ctgaacctga agaaggtgct gggtttcatc accgacgcgg gtggccgtac ttcccacacc
     9121 tctatcatgg cgcgttctct ggaactgcct gctatcgtgg gtaccggtag cgtcacctct
     9181 caggtgaaaa atgacgacta tctgattctg gatgccgtaa ataatcaggt ttacgtcaat
     9241 ccaaccaacg aagttattga taaaatgcgt gctgttcagg agcaagtggc ttctgaaaaa
     9301 gcagagcttg ctaaactgaa agatctgcca gctattacgc tggacggtca ccaggtagaa
     9361 gtatgcgcta acattggtac ggttcgtgac gttgaaggtg cagagcgtaa cggcgctgaa
     9421 ggcgttggtc tgtatcgtac tgagttccta ttcatggacc gcgacgcgct gcccactgaa
     9481 gaagaacagt ttgctgctta caaagcagtg gctgaagcgt gtggctcgca ggcggttatc
     9541 gttcgtacca tggacatcgg cggcgacaaa gagctgccat acatgaactt cccgaaagaa
     9601 gagaacccgt tcctcggctg gcgcgctatc cgtatcgcga tggatcgtaa agagatcctg
     9661 cgcgatcaac tccgcgctat cctgcgtgcc tcggctttcg gtaaattgcg cattatgttc
     9721 ccgatgatca tctctgttga agaagtgcgt gcactgcgca aagagatcga aatctacaaa
     9781 caggaactgc gcgacgaagg taaagcgttt gacgagtcaa ttgaaatcgg cgtaatggtg
     9841 gaaacaccgg ctgccgcaac aattgcacgt catttagcca aagaagttga tttctttagt
     9901 atcggcacca atgatttaac gcagtacact ctggcagttg accgtggtaa tgatatgatt
     9961 tcacaccttt accagccaat gtcaccgtcc gtgctgaact tgatcaagca agttattgat
    10021 gcttctcatg ctgaaggcaa atggactggc atgtgtggtg agcttgctgg cgatgaacgt
    10081 gctacacttc tgttgctggg gatgggtctg gacgaattct ctatgagcgc catttctatc
    10141 ccgcgcatta agaagattat ccgtaacacg aacttcgaag atgcgaaggt gttagcagag
    10201 caggctcttg ctcaaccgac aacggacgag ttaatgacgc tggttaacaa gttcattgaa
    10261 gaaaaaacaa tctgctaatc cacgagatgc ggcccaattt actgcttagg agaagatcat
    10321 gggtttgttc gataaactga aatctctggt ttccgacgac aagaaggata ccggaactat
    10381 tgagatcatt gctccgctct ctggcgagat cgtcaatatc gaagacgtgc cggatgtcgt
    10441 ttttgcggaa aaaatcgttg gtgatggtat tgctatcaaa ccaacgggta acaaaatggt
    10501 cgcgcctgta gacggtacca ttggtaaaat ctttgaaacc aatcacgcgt tctctatcga
    10561 atctgatagc ggcgttgaac tgttcgtcca cttcggtatc gacaccgttg aactgaaagg
    10621 cgaaggcttc aagcgtattg cagaagaagg tcagcgcgtg aaagttggcg atactgtcat
    10681 tgaatttgat ctgccgctgc tggaagagaa agccaagtct accctgactc cggttgttat
    10741 ctccaacatg gacgaaatca aagaactgat caaactgccc ggtagcgtaa ccgtgggtga
    10801 aaccccggtt atccgcatca agaagtaatt cttgccgcag tgaaaaatgg cgcccatcg
//
LOCUS       DADMIB010000147        10762 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.148, whole genome shotgun sequence.
ACCESSION   DADMIB010000147 DADMIB010000000
VERSION     DADMIB010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10762
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.148"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..2192
                     /locus_tag="JNZ89_003435"
     CDS             <1..2192
                     /locus_tag="JNZ89_003435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exonuclease"
                     /protein_id="HAY8937193.1"
                     /translation="RYEKGGKDGITMTFIGPSPSVQDKSASTDNTNINGEDMTEIEES
                     MLLPVSGQELPIRWLAQHGSEKPVTHVSRDELQALHIARAEELPAVTALAISHKTSLL
                     DSLEIRDLHKLVRDTDKVFPNPGNSDLGLITAFFEAYLDADYTDRGLLTKEWMKGNRV
                     SRITRTASGANAGGGNKTDRNPNLVHTLDTLDVEIAAATLPMDFNIYEIPGSVYRRAK
                     EVVLKKESPFKEWSAALRAPPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINAYLT
                     ETDHENPSKETLTATRHTPEKDILEEINREVVTERETEEEKPQPSDAMAGEQATTETM
                     EPDTTEHCQNAQSLDAQSQVSSANQVKVTADEVNKIMQAANISQPDADKLLAVSRGEF
                     VEGISDPNDPKWVKGIQTRDSVNQNQHESERNDQKAEQNSPNALQNEPETKQSEPVAQ
                     QEPEKVCTACGQSGGGNYPDCGAVMDDATYQKTFDEENQVEVQENDPEEMEGAEHPHK
                     ENAGSAQDHASDSKTGETADPLITVNGHHEITSTSRTCDHLMIDLETMGKNPDAPIIS
                     IGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDD
                     ALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVE
                     LGKAIDFDARTAIPFEGERHNALDDARYQAKYVSAIWQKLIPSQADF"
     gene            2251..2454
                     /locus_tag="JNZ89_003436"
     CDS             2251..2454
                     /locus_tag="JNZ89_003436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HAY8937194.1"
                     /translation="MSSLFLTEDELLILTGCKYASHQRKWLMENELPFYTNRSGKPIV
                     SRDLFTCNKTLPPREVEPNFGAI"
     gene            2634..3479
                     /locus_tag="JNZ89_003437"
                     /pseudo
     CDS             2634..3479
                     /locus_tag="JNZ89_003437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142672.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
     gene            complement(3507..3596)
                     /locus_tag="JNZ89_003438"
     tRNA            complement(3507..3596)
                     /locus_tag="JNZ89_003438"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3560..3562),aa:Ser,seq:cga)
     gene            3690..4487
                     /gene="mtfA"
                     /locus_tag="JNZ89_003439"
     CDS             3690..4487
                     /gene="mtfA"
                     /locus_tag="JNZ89_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DgsA anti-repressor MtfA"
                     /protein_id="HAY8937195.1"
                     /translation="MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAE
                     RFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDE
                     WEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGD
                     RASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSE
                     YFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH"
     gene            4588..4663
                     /locus_tag="JNZ89_003440"
     tRNA            4588..4663
                     /locus_tag="JNZ89_003440"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4621..4623,aa:Asn,seq:gtt)
     gene            4977..>10762
                     /locus_tag="JNZ89_003441"
     CDS             4977..>10762
                     /locus_tag="JNZ89_003441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010723107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter adhesin-like protein
                     YeeJ"
                     /protein_id="HAY8937196.1"
                     /translation="MATKKRSGEEINDRQILCGMGIKLRRLTAGICLITQLAFPMAAA
                     AQGVVNAATQQPVPAQIAIANANTVPYILGALESAQSVAERFGISVAELRKLNQFRTF
                     ARGFNNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSLLAEDMNSEQ
                     AANMARGWASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHPWYETPDNLF
                     FSQHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGIGAEYWRDYL
                     KLSSNGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPSWPHLGGKLVYEQYYGDE
                     VALFDKDDRQSNPHAITAGLNYTPFPLMTFSAEQRQGKQGENDTRFAVDFTWQPGSAM
                     QKQLDPNEVAARRSLAGSRYDLVDRNNNIVLEYRKKELVRLTLTDPVTGKSGEVKSLV
                     SSLQTKYALKGYNVEATALEAAGGKVVTTGKDILVTLPAYRFTSTPETDNTWPIEVTA
                     EDVKGNLSNREQSMVVVQAPTLSQKDSSVSLSTQTLNADSHSTATLTFIAHDAAGNPV
                     VGLVLSTRHEGVQDITLSDWKDNGDGSYTQILTTGAMSGTLTLMPQLNGVDAAKAPAV
                     VNIISVSSSRTHSSIKIDKDRYLSGNPIEVTVELRDENDKPVKEQKQQLNNAVSIDNV
                     KPGVTTDWKETADGVYKATYTAYTKGSGLTAKLLMQNWNEDLHTAGFIIDANPQSAKI
                     ATLSASNNGVLANENAANTVSVNVADEGSNPINDHTVTFAVLSGSATSFNNQNTAKTD
                     VNGLATFDLKSSKQEDNTVEVTLENGVKQTLIVSFVGDSSTAQVDLQKSKNEVVADGN
                     DSATMTATVRDAKGNLLNDVMVTFNVNSAEAKLSQTEVNSHDGIATATLTSLKNGDYR
                     VTASVSSGSQANQQVNFIGDQSTAALTLSVPSGDITVTNTAPQHMTATLQDKNGNPLK
                     DKEITFSVPNDVASRFSISNSGKGMTDSNGVAIASLTGTLAGTHMITARLANSNVSDT
                     QPMTFVADKDRAVVVLQTSKAEIIGNGVDETTLTATVKDPFDNVVKNLSVVFRTSPAD
                     TQLSLKALNTNENGIAEVTLKGTVLGVYTAEAILLNGKSDTKIVNIVPDTSNAQVTLN
                     IPAQQVVTNNSDSVQLTATVKDPSNHPVAGITVNFTMPQDVAANFTLENNGIAITQAN
                     GEAHVTLKGKKAGMHTVTATLGNNNASDAQPVTFVADKDSAVVVLQTSKAEIIGNGVD
                     ETTLTATVKDPFDNAVKDLQVTFSTKPADTQLSQSTSNTNDSGVAEVTLKGTVLGVHT
                     VEATLPNGNGYTTTVNIAPDTSNAQVTLNIPAQQVVTNNSDSVQLTAMVKDPSNHPVA
                     GITVNFTMPQDVAANFTLENNGIAITQANGEAHVTLKGKKAGTHTVTATLGNNNTSDS
                     QPVTFVADKTSAQVVLQMSKDEITGNGVDNATLTATVKDQFDNGVNNLPVTFSSASSG
                     LTLTPGVSNTNESGIAQATLAGVAFGEKTVTASLANNGASDNKTVHFIGDTAAAKIIE
                     LTPVPDSIIAGTPQNSSGSVITATVVDNNGFPVKGVTVNFTSNAATAEMTNGGQAVTN
                     EQGKATVTYTNTRSSIESGARPDTVEASLENGSSTLSTSINVNADASTAHLTLLQALF
                     DTVSAGETTSLYIEVKDNYGNGVPQQEVTLSVSPSEGVTPSNNAIYTTNHDGNFYASF
                     TATKAGVYQLTATLENGDSMQQTVTYVPNVANAEITLAASKDPVIADNNDLTTLTATV
                     ADTEGNAIANTEVTFTLPEDVKANFTLSDGGKAITDAEGKAKVTLKGTKAGAHTVTAS
                     MTGGKSEQLVVNFIADTLTAQVNLNVTEDNFIANNVGMTRLQATVTDGNGNPLANEAV
                     TFTLPADVSASFTLGQGGSAITDINGKA"
BASE COUNT         3107 a         2604 c         2629 g         2422 t
ORIGIN      
        1 accgctatga aaaaggcggg aaagatggca tcacaatgac atttatcggc ccttccccct
       61 ctgttcagga caaatcagcc agcactgata ataccaacat caacggcgaa gacatgactg
      121 agattgagga gagcatgctt ctacctgtct ccggtcagga actgcccatt cgttggcttg
      181 ctcaacacgg cagcgaaaaa ccagtaacgc acgtttcacg cgacgaactc caggcattac
      241 acattgcacg ggctgaagaa ctaccggctg ttactgccct ggctatttcg cataaaacca
      301 gtctgctcga ctcgctggag attcgcgacc tccacaaact ggttcgtgac actgacaaag
      361 ttttccctaa tcctggtaat tcagacctgg gactaataac tgcttttttc gaagcatact
      421 tggacgctga ctacactgat cggggcctgc tgacaaaaga gtggatgaaa ggaaatcgtg
      481 tttcacgcat cacccgcacg gcttccggtg ctaatgctgg tggtgggaac aaaaccgatc
      541 gcaatccgaa tttagtacac accctcgaca cactggatgt ggagattgca gcagccacac
      601 ttccgatgga ttttaatatt tatgaaattc cgggcagcgt ttatcgtcgc gcaaaagaag
      661 tagtcctgaa aaaagaaagt ccgttcaaag aatggtccgc agcacttcgt gcacccccgg
      721 gtattctgga ctattcccgc gccgctattt ttgcacttat ccgaagcgca caccctgaat
      781 tttatcacta cccgggacgc cttcaggggt atatcaacgc ctatttgacg gaaactgatc
      841 acgagaaccc cagcaaggaa actctcacag ctacccggca tacgccggaa aaagatatcc
      901 tggaagaaat taaccgcgag gtggttactg agcgtgaaac agaagaagaa aaaccacaac
      961 catctgacgc aatggcaggt gaacaggcaa caactgaaac aatggaaccg gatacaactg
     1021 aacattgcca gaacgcgcag tcgctggatg ctcagtcgca ggtgagttcc gctaaccaag
     1081 taaaagtcac cgctgacgaa gtaaacaaaa ttatgcaggc agccaatatc agccagcctg
     1141 acgccgataa gttacttgct gtatcgcgtg gtgaatttgt tgaggggatt agcgacccta
     1201 atgatccgaa atgggtcaag gggatccaga ctcgcgattc tgtgaaccag aaccagcatg
     1261 aatcggaacg gaacgaccaa aaagcggaac aaaacagccc aaatgcgtta caaaacgagc
     1321 cagaaacgaa acaatccgaa ccagtagcgc aacaggaacc ggaaaaagtc tgcaccgcct
     1381 gcggtcagag cggtggcggc aactaccctg attgtggcgc ggtgatggac gacgcaacat
     1441 accagaaaac attcgatgaa gagaatcagg ttgaagttca ggaaaatgat ccggaggaaa
     1501 tggaaggcgc tgaacatcca cacaaggaga atgctggcag cgctcaggac cacgccagcg
     1561 atagtaaaac tggcgagacg gcagatccct taattacggt gaatggtcat cacgaaatca
     1621 catccaccag caggacgtgt gaccatctaa tgatcgacct tgaaaccatg ggaaaaaatc
     1681 ctgatgcccc gatcatctca ataggtgcaa tatttttcga tccgcaaacc ggagatatgg
     1741 gacccgaatt tagtaagact atcgatctgg aaactgctgg cggagtcatt gatcgggaca
     1801 ccattaaatg gtggcttaag caatcacgcg aagcgcaatc tgccattatg accgatgaaa
     1861 tcccgttaga tgatgcactg ttacaattgc gggaatttat cgacgaaaac tccggtgaat
     1921 tttttgttca ggtctgggga aatggagcca acttcgacaa cacgattttg cgccgttcat
     1981 acgaacggca ggggatcccc tgcccgtggc gttactacaa cgatcgcgat gtacgcacaa
     2041 tcgttgagct ggggaaagcc atagacttcg atgccagaac ggctattcca ttcgaaggtg
     2101 agcgccataa tgcacttgat gacgctcgtt accaggcaaa atacgtttca gctatctggc
     2161 aaaaactgat cccgagtcag gctgattttt aatgttcaac cctaattgcc gctaaccgta
     2221 tatagttagc ggcggttatg agatatagct atgagcagct tatttttaac cgaagatgaa
     2281 ttgctaatat taacgggctg caaatatgca agccaccagc gaaaatggtt aatggaaaac
     2341 gagcttccgt tctataccaa tcgtagtggc aaaccgattg tcagccggga tctatttacc
     2401 tgcaataaaa ctttaccacc acgcgaggta gagccgaatt ttggtgcgat ctgatgggaa
     2461 gacgaaggaa aaatcctgag cacgaaaaat tacctccaaa tgtataccca aataaatata
     2521 gttatgtatg gaaaccaaca tccagcgaat ctgtaacact aaccgccatc aaggatggtt
     2581 tagctgcttt atggaaaaag tatgaggaaa ctgtaaataa tcgcgatcgt gcaatgacat
     2641 tcggtcgctt gtgggaaaaa ttcctcgcca gcgcctatta cagtgacctc agtccaagaa
     2701 cacaaaaaga ttatctgcaa catcaaaaaa gttgcttgcc gtattcggta aggtgccggc
     2761 agattccata aaaccagaac acatccgtcg atacatggac aagagagggg aacagagtaa
     2821 aacgcaagcc aaccatgaag tcccgcgttt acagttgggg gtatgagcga gggtacgtga
     2881 aggctaaccc atgtgcaggt gtaagtaaat tcaaggccaa aaaccgcgaa cgatatgtaa
     2941 ccgacaaaga ataccaggca gtattaagcg ttgcacctct tcctgttttt atcgcaatgg
     3001 aaattgccta tctgtgtgca gcgagggttt ccgatgtgtt atcgctgaaa tgggagcaga
     3061 ttggaaacga cgggatcttt atccagcaag ggaaaacagg aaaaaaacag ataaaagcat
     3121 ggagtccacg attacaggcg gcgatcgaaa aagcaaaaca gttaccaaca tccgcctatg
     3181 taatcagcaa tcaatacggc aaccgatata tgtacaaagg ctttaacgaa atgtgggtag
     3241 aagcaagaaa tcgcgcaggc aaaatttcag gtattttaac cgacttcacc tttcatgatc
     3301 tgaaggcgaa aggaatttca gactatgaag gaagcagtcg ggataagcaa cttttctctg
     3361 gtcacaaaac cgaggggcaa gtgctaatct atgacaggaa ggttaaagtt tcaccgacac
     3421 ttgatgtccc gttacctgaa aatattccaa gtaattccac gtgtgatttt tgtcactgac
     3481 ttaatgatgt ataagtgatt gaattttggc ggagagaggg ggatttgaac ccccggtgga
     3541 gttgccccca ctccggtttt cgagaccggt ccgttcagcc gctccggcat ctctccgttc
     3601 agatggttgc catgatgcca ggaaatttgg cattttaaca gtccctgtcc gtgcaatttt
     3661 gttcaagtga cgagtttgcg agcaaaacga tgattaagtg gccctggaaa gtacaagaat
     3721 cagcacatca aactgccctt ccctggcagg aagcactatc gatccccctt ttaacgtgtc
     3781 tgacggaaca ggaacaaagc aaattagtca ctcttgccga acgtttttta cagcaaaagc
     3841 ggcttgttcc tttacagggc tttgaactgg attcattaag aagctgccgg atagcacttc
     3901 tattttgcct acccgttctg gagttaggac tggaatggct ggatggtttt catgaagtct
     3961 taatttatcc tgcgccattt gtggtcgatg atgaatggga agacgatatc ggtctggtgc
     4021 ataaccaacg tattgttcag tcaggtcaga gctggcagca agggcctatc gttttgaact
     4081 ggttggatat acaagattct tttgatgctt ctggttttaa cctgattatt catgaagttg
     4141 ctcataagct ggacacccgt aacggcgatc gcgccagcgg agttcccttt attccgttgc
     4201 gtgaggttgc tggctgggaa cacgatcttc atgctgcaat gaacaacatt caggaagaaa
     4261 tcgaattggt tggcgagaat gcggcgagca ttgatgctta tgcagccagc gatcctgctg
     4321 aatgttttgc cgtactttct gaatatttct ttagcgcccc agaacttttt gctcctcgtt
     4381 tcccttcatt gtggcaacgt ttctgccaat tttatcaaca agatcctttg cagagactgc
     4441 atcacgctaa tgatacagac tcgttttcgg cgacgaatgt tcattaatta acaactttgc
     4501 atattaatta atcaattgaa atgacttatg aaatttagtg ttgacagaca aggtaccgct
     4561 aagtaatatg cgccccgttc acacgattcc tctgtagttc agtcggtaga acggcggact
     4621 gttaatccgt atgtcactgg ttcgagtcca gtcagaggag ccaaattcta aaaattcgct
     4681 tttttagcgc aatgtcactg accttagttg aacattgttt tttaacggat agcgggtttt
     4741 taacatctta agcgccctcg acctttatgg ttgagggcgt tttgctatga acgccatcac
     4801 cattttcccc tcgattataa aacttgagtt attcagtagt ctcccctctt gcaactcaca
     4861 cccaaaactg cctaacgaaa agttattaat tttcaatcat attgctatca gtatttacat
     4921 tttttcgctg tgctagaaag ggcgcattta tgttagctcg ttcagggaag gtaagcatgg
     4981 ctacgaagaa gagaagtgga gaagaaataa atgaccgaca aatattatgc gggatgggaa
     5041 ttaaactacg ccgcttaact gcgggtatct gtctgataac tcaacttgcg ttccctatgg
     5101 ctgcggcagc acaaggtgtg gtaaacgccg caacccaaca accagttcct gcacaaattg
     5161 ccattgcaaa tgccaatacg gtgccctaca tccttggagc gctggaatcg gcccaaagcg
     5221 ttgccgaacg tttcggtatt tcggtggctg agttacgcaa actcaaccag tttcgtacgt
     5281 ttgctcgagg ttttaataat gtccgccagg gtgatgaact ggatgtcccg gcacaagtta
     5341 gtgaaaaaaa attaaccccg ccgccgggta atagcagtga caacctcgag caacagatag
     5401 ccagtacttc acagcaaatc gggtctctgc tcgccgaaga tatgaacagc gagcaagcgg
     5461 caaatatggc gcgtggatgg gcctcttctc aggcttcagg cgcaatgaca gactggttaa
     5521 gccgcttcgg taccgcaaga atcacgctgg gcgtggatga agattttagc ctgaagaact
     5581 cccagttcga ttttctccat ccgtggtatg aaacgcctga taatctcttt ttcagtcagc
     5641 atactctcca tcgtactgac gagcgtacgc agattaacaa cggcttaggt tggcgtcatt
     5701 tcactcccac atggatgtca ggcatcaact tctttttcga ccacgatctt agccgttacc
     5761 actcccgcgc cggcattggc gcggagtact ggcgcgacta tctaaaatta agcagtaacg
     5821 gctatttgcg actgaccaac tggcgcagcg cacctgaact ggacaacgat tatgaagcac
     5881 gcccggccaa tggctgggat gtacgcgcag aaagctggct accctcctgg ccgcaccttg
     5941 gcggtaaact ggtctatgaa cagtattatg gcgatgaagt ggccctgttc gataaagacg
     6001 atcggcaaag taatcctcat gccataaccg ctggacttaa ctataccccc ttcccgctga
     6061 tgaccttcag cgcggagcaa cgccagggta aacagggcga aaatgacacc cgttttgccg
     6121 tcgattttac ctggcaacct ggcagcgcaa tgcagaaaca gcttgacccg aatgaagtcg
     6181 ctgcacggcg tagccttgca ggcagccgtt atgatctggt ggatcgcaac aacaatatcg
     6241 ttctggaata tcgcaaaaaa gaactggttc gcctgaccct gacagacccc gtgacaggga
     6301 agtcaggaga agtgaaatca ctggtttcgt cgctacaaac caaatatgcc ctgaaaggct
     6361 ataacgtcga agccaccgca ctggaagctg ccggtggcaa agtggtcaca acgggtaaag
     6421 atattctggt taccctgccg gcttaccggt tcaccagtac gccagaaacc gataacacct
     6481 ggccgattga agtcaccgcc gaagatgtca aaggcaattt gtcgaatcgt gaacagagca
     6541 tggtggtcgt tcaggcacct acgctaagcc agaaagattc ctcggtatcg ttaagtaccc
     6601 aaacattgaa cgcggattcc cattcaaccg ccacactgac ttttattgcg catgatgcag
     6661 caggtaatcc tgttgtcggg ctggtgctct cgacgcgtca cgaaggtgtt caggacatca
     6721 ccctttctga ctggaaagat aatggtgacg gaagctatac ccagatcctg accacaggag
     6781 cgatgtctgg cacgctgacg ctgatgccac agctgaatgg tgtggatgcg gctaaagccc
     6841 ccgccgtggt gaatatcatt tctgtttcgt catcccgaac tcactcgtca attaagattg
     6901 ataaggaccg ttatctctcc ggcaatccta tcgaggtgac ggtagaactg agagatgaaa
     6961 atgacaaacc tgttaaggaa caaaaacagc aactgaataa cgcagtcagc atcgacaacg
     7021 tgaaaccagg agtcactaca gactggaaag aaaccgcaga tggcgtctat aaggcgacct
     7081 ataccgccta taccaaaggc agtggactta ctgcgaagct attaatgcaa aactggaatg
     7141 aagatttgca taccgctgga tttatcatcg acgccaaccc gcagtcagcg aaaattgcga
     7201 cattatctgc cagcaataat ggtgtgctcg ccaatgagaa tgcagcaaac accgtctcgg
     7261 tcaatgtcgc tgatgaagga agcaacccaa tcaatgatca taccgtcacg tttgcggtat
     7321 taagcggatc ggcaacttcc ttcaacaatc aaaacaccgc aaaaacggat gttaatggtc
     7381 tggcgacttt tgatctgaaa agtagtaagc aggaagacaa cacggttgaa gtcacccttg
     7441 aaaatggcgt gaaacaaacg ttaatcgtca gttttgtcgg cgactcgagt accgcgcagg
     7501 ttgatctgca gaagtcgaaa aatgaagtgg ttgctgacgg caatgacagc gccacaatga
     7561 ccgcgaccgt ccgggatgca aaaggcaacc tgctcaatga cgtcatggtc actttcaatg
     7621 ttaattcagc agaggcgaaa ctgagccaaa ccgaagtgaa tagccacgac gggatcgcca
     7681 cagctacgct gaccagtttg aaaaatggtg attatagggt tacggcctct gtgagctctg
     7741 gttcccaggc taatcaacag gtgaatttta tcggtgatca aagtactgct gccctgaccc
     7801 tcagtgtgcc ttcaggtgat atcaccgtca ccaacacagc tccgcaacat atgactgcaa
     7861 ccttgcagga taaaaatggc aacccactaa aagataaaga aatcaccttc tctgtaccaa
     7921 acgacgtcgc aagtcggttc tcgattagca acagcggaaa aggcatgacg gatagcaacg
     7981 gggttgcaat cgcctccctg accggcacgt tagcgggcac gcatatgatc acggctcgtc
     8041 tggctaacag caatgtcagc gatacacagc caatgacgtt tgtggcggat aaagacagag
     8101 cggttgtcgt tctgcaaaca tcgaaagcgg aaatcattgg gaatggcgtg gatgagacaa
     8161 ctctgacagc aacagtgaaa gatccttttg ataacgtggt taaaaatctg tcagtagtct
     8221 tccgcacctc ccccgcagac acgcaactga gtctgaaggc gcttaatact aatgagaacg
     8281 gtattgctga agttaccctt aagggcacgg ttttgggtgt ttatacagcc gaagccatac
     8341 tgcttaacgg taaaagcgat acgaaaatcg tcaatattgt gcccgatacc agcaacgcgc
     8401 aggtcaccct gaacatccca gctcaacagg tggtgacgaa taacagcgac agcgtgcagc
     8461 tgacggcgac ggtgaaagat ccgtcgaatc atccggtggc gggaataacg gtgaacttca
     8521 ccatgcctca ggacgtggcg gcaaacttta cccttgaaaa taacggtatt gccatcactc
     8581 aggccaatgg cgaagcgcat gtcaccctca aaggtaaaaa agcgggcatg catacggtta
     8641 ccgcaacgtt gggtaacaat aatgccagcg atgcgcaacc tgtcacattc gtggcggata
     8701 aggacagcgc agttgtcgtt ctgcaaacat cgaaagcgga aatcattggg aatggcgtgg
     8761 atgagacgac tctaacagca acagtgaaag atccttttga taacgcagta aaagatctac
     8821 aggttacctt cagtaccaag ccggcagata ctcaacttag tcagagcaca agcaatacta
     8881 acgacagtgg tgttgctgaa gttaccctta agggcacggt tttgggcgtt catacagtcg
     8941 aagccacact tcctaacggc aacggctata caacgacagt caatattgcg cccgatacca
     9001 gcaacgcgca ggttacgctg aacatccctg ctcaacaggt ggtgacgaat aacagtgaca
     9061 gcgtgcagct tacggcgatg gtgaaagatc cgtcgaatca tccggtggcg gggataacgg
     9121 tcaacttcac catgccacag gacgttgcgg caaactttac cctcgaaaat aacggcattg
     9181 ccatcaccca agccaatggg gaagcgcatg tcacgctgaa aggtaaaaaa gcgggtacgc
     9241 atacggttac cgcaacgctg ggtaataaca ataccagtga ttcgcagccg gtaacgtttg
     9301 tggcggacaa aacctcggct caggttgtcc tgcagatgtc aaaagatgag atcacaggta
     9361 atggcgtcga taacgcaacg ctaactgcaa cggttaaaga tcagttcgac aatggggtga
     9421 ataatcttcc ggtaacattc agctcagcct cttcaggact caccctgacc ccgggagtaa
     9481 gtaataccaa tgagtctggc atcgcgcagg ccactctcgc aggcgttgcc tttggtgaga
     9541 agacggttac tgcatcactg gctaataatg gtgccagcga caacaaaact gtgcatttta
     9601 ttggcgacac agcggcggca aaaattatcg agttgacgcc tgtcccagac agcataatcg
     9661 ccggtacccc gcagaacagc tccggcagcg tcatcaccgc cacagtcgtt gataataatg
     9721 gctttccggt gaaaggtgtg actgtgaact tcaccagcaa cgcagcgaca gccgaaatga
     9781 cgaacggcgg tcaagccgtg acgaacgaac agggtaaggc taccgtcact tataccaata
     9841 cccgctcctc gatagaatca ggagcgagac cggataccgt tgaggccagt ctggaaaatg
     9901 gtagctccac gcttagcaca tcaattaatg tcaacgctga tgcgtctacg gcacatctca
     9961 ccttgctaca ggcacttttt gatacagtct ccgcaggcga gacaaccagt ctgtatattg
    10021 aggtgaagga taattacggc aacggtgtcc cccagcagga ggtaaccctc agcgtttcac
    10081 caagtgaagg cgtgaccccc agtaataacg ctatatatac taccaaccac gacggcaatt
    10141 tttacgcaag ctttaccgct acaaaagccg gggtttatca attgacggca accctcgaaa
    10201 atggcgattc gatgcaacaa acagtgacct atgtgccgaa cgtcgcgaat gctgaaatca
    10261 cgctggcagc ctcgaaggat ccggtgattg ccgacaataa cgatctcacg acactaacag
    10321 caacagtcgc tgatacagag ggcaatgcga tagccaacac tgaggtaaca tttactctgc
    10381 cggaagatgt gaaggcgaac ttcacgctga gcgatggcgg taaagcgatt actgatgctg
    10441 aaggcaaagc gaaagtcacg ctgaaaggta caaaagcagg cgctcatact gttacagcat
    10501 cgatgactgg cggtaagagt gagcagttgg tggtgaactt tattgcggat acgctcactg
    10561 cgcaggttaa tcttaacgtt accgaggaca attttatcgc taataacgtc gggatgacca
    10621 ggctgcaggc aacagtgact gatggaaacg gcaacccgtt agccaatgag gcggtgacat
    10681 tcacgctacc ggcagatgtg agcgcaagct ttactctcgg acaaggcggt tccgccatta
    10741 ctgatatcaa cggcaaggct ga
//
LOCUS       DADMIB010000148        10700 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.149, whole genome shotgun sequence.
ACCESSION   DADMIB010000148 DADMIB010000000
VERSION     DADMIB010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10700
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.149"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(89..238)
                     /gene="hokB"
                     /locus_tag="JNZ89_003442"
     CDS             complement(89..238)
                     /gene="hokB"
                     /locus_tag="JNZ89_003442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokB"
                     /protein_id="HAY8937197.1"
                     /translation="MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALM
                     ACTSR"
     gene            637..2250
                     /gene="trg"
                     /locus_tag="JNZ89_003443"
                     /pseudo
     CDS             637..2250
                     /gene="trg"
                     /locus_tag="JNZ89_003443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415938.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein Trg"
     gene            complement(2288..3210)
                     /locus_tag="JNZ89_003444"
                     /pseudo
     CDS             complement(2288..3210)
                     /locus_tag="JNZ89_003444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310054.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            3427..4770
                     /locus_tag="JNZ89_003445"
     CDS             3427..4770
                     /locus_tag="JNZ89_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY8937198.1"
                     /translation="MANSITADEIREQFSQAMSAMYQQEVPQYGPLLELVADVNLAVL
                     ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA
                     GGPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR
                     QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEYRLIADVVCFP
                     GCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF
                     AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFP
                     DSEFLMRQQGLAWFRYRLTPSGEAHRQAIHLGDDPQPLIERGWVVAQPITYEDFLPVS
                     AAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL"
     gene            4995..6650
                     /locus_tag="JNZ89_003446"
     CDS             4995..6650
                     /locus_tag="JNZ89_003446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HAY8937199.1"
                     /translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR
                     FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD
                     AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
                     FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW
                     FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAP
                     MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP
                     KGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVC
                     FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEK
                     WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD
                     STDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS"
     gene            6790..7014
                     /locus_tag="JNZ89_003447"
     CDS             6790..7014
                     /locus_tag="JNZ89_003447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415943.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HAY8937200.1"
                     /translation="MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGFDGRGY
                     NAEVVRMKKQKLQLKDEMLKILQQESVKGV"
     gene            7077..7613
                     /gene="rimL"
                     /locus_tag="JNZ89_003448"
     CDS             7077..7613
                     /gene="rimL"
                     /locus_tag="JNZ89_003448"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HAY8937201.1"
                     /translation="MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQF
                     VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE
                     SHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE
                     FLNDAYDDVNLYARIIDS"
     gene            complement(7608..8588)
                     /locus_tag="JNZ89_003449"
                     /pseudo
     CDS             complement(7608..8588)
                     /locus_tag="JNZ89_003449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707644.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LbetaH domain-containing protein"
     gene            8712..9704
                     /gene="tehA"
                     /locus_tag="JNZ89_003450"
     CDS             8712..9704
                     /gene="tehA"
                     /locus_tag="JNZ89_003450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HAY8937202.1"
                     /translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL
                     VILAMIIWGLLTSAFITRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFR
                     PLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATMPGLYLPTVANNFISAMACGALG
                     YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSV
                     NGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGS
                     GSENGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE"
     gene            9701..10294
                     /gene="tehB"
                     /locus_tag="JNZ89_003451"
     CDS             9701..10294
                     /gene="tehB"
                     /locus_tag="JNZ89_003451"
                     /EC_number="2.1.1.265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
                     /protein_id="HAY8937203.1"
                     /translation="MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN
                     SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST
                     VVLMFLEAKTIPGLIANMQRCTKLGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY
                     EGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK"
     gene            10597..>10700
                     /locus_tag="JNZ89_003452"
     CDS             10597..>10700
                     /locus_tag="JNZ89_003452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HAY8937204.1"
                     /translation="MRTTSFAKVAALCGLLALSGCASKITQPDKYSGF"
BASE COUNT         2737 a         2497 c         2711 g         2755 t
ORIGIN      
        1 aaacatgcac taactgaagt gtaaaagggg tgccatgaga aaatgaatct gctagtcaga
       61 tgcgcgggga aaatccccgc gcttgccctt acctggacgt gcaggccatg agcgcagcaa
      121 cctccttatc accgtcccgg aaccgcagtt cgtagagcgt ttgtcgggtc aggagtgtga
      181 atgtcagaat cgtaatgcag ataatgagca gacacaccac cagagggttg tgcttcatag
      241 cctttctcct tgccggatgg cgggtaagag gctaagatct gaattgctag gttcattcgt
      301 tggcctcggt tgatagaaat atcggtcggg gccttcgtct ttctgattcc cggttagcct
      361 gaaaacagaa agtctcaggc acccgcaggc atcctatgag gtttccttag ggacgaaaat
      421 aatcacttca cgaaattgcg tgctgttttc cagaattttt cgtcattcgg attagccagt
      481 ttagccattc gttactctct tcattccaat agcattaatt ttctctgcaa taattgttgt
      541 aaaaatgtga cgcaaagagg tttttggtca taagtaatta ccgtcaagtg ccgatgactt
      601 tctatcagga gtaaacctgg acgagagaca acggtaatga atacaactcc ctcacagcga
      661 ttaggttttt tgcatcacat caggctggtt ccgttatttg cctgcattct tggcggtatc
      721 ttagttctat tcgcattaag ttctgctctg gcaggccgat cgcgatcagc gtgatgttac
      781 tgcggagatt gagattcgga ccgggttagc gaacagttca gattttttgc gttcagcccg
      841 gatcaatatg attcaggccg gggctgcgag tcgtattgcg gaaatggaag caatgaagcg
      901 aaatattgcg caagccgaat cggagattaa acagtcgcag caaggttatc gtgcttatca
      961 gaatcgaccg gtgaaaacac ctgctgatga agccctcgac actgaattaa atcaacgctt
     1021 tcaggcttat atcacgggta tgcaacctat gttgaaatat gccaaaaatg gcatgtttga
     1081 agcgattatc aatcatgaaa gtgagcagat ccgaccgctg gataatgctt ataccgatat
     1141 tttgaacaaa gccgttaaga tacgtagcac cagagccaac caactggcgg aactggccca
     1201 tcagcgcacc cgcctgggtg ggatgttcat gattggcgcg tttgtgcgtg ccctggtcat
     1261 gacgctgata acatttatgg tgctacgtcg gatcgtcatt cgtccactgc aacatgccgc
     1321 acaacggatt gaaaaaatcg ccagtggcga tctgacgatg aatgatgaat cggcgggtcg
     1381 taatgaaatc ggtcgcttaa gtcgtcattt acagcaaatg cagcattcac tggggatgac
     1441 agtagggact gttcgacagg gcgcggaaga gatttatcgt ggcaccagcg aaatttcagc
     1501 tggcaatgcg gacctgtcat ctcgcaccga agaacaagcg gcggctatcg aacaaactgc
     1561 cgccagcatg gagcaactca ctgcgacggt gaaacagaat gcggataacg cgcatcatgc
     1621 cagcaaactg gcgcaagagg cttctattaa agccagcgat ggcgggcaga cggagtaaaa
     1681 acgatgggcg ctatctccac gagttcgaag aaaatttctg agatcaccgc cgtcatcaac
     1741 agtattgctt tccagacgaa tattctggca ctgaatgctg ccgttgaagc cgcgcgagcg
     1801 ggtgagcaag ggcgtggatt tgccgttgtc gccagcgaag tacggacact cgcaagtcgc
     1861 agcgctcagg cggcgaaaga gattgaaggc ttgatcagtg aatcagtcag gttaattgac
     1921 ctggggtcgg atgaggtggc aacggccggg aaaaccatga gcactattgt tgatgccgtc
     1981 gcgagtgtca cacatatcat gcaggaaatc gccgccgcct cggatgaaca aagtagaggc
     2041 ataacgcagg ttagccaggc gatttctgaa atggataagg tgacgcaaca gaatgcttct
     2101 ctggtagaag aggcctcagc ggcggcggtg tcccttgaag aacaggcggc acgattaact
     2161 gaggcggtgg atgtattccg tctgaacaaa cattctgtgt cggcagaacc tcgcggagcg
     2221 ggtgaaccag ttagtttcgc tacggtgtga aaatgttcaa ggagggatcg acagatccct
     2281 tcacctttca gaacggcatt gattttcgaa tagcgttaat catcaactgg caaccagaag
     2341 agaacatcgc atctacgcgg gtcagtattc caatcggttc gcctgcacca tgtcccggaa
     2401 caggctgggc caccagcgtg gcatgacgca ggtcgtcttt taccgcgcca gaagggacaa
     2461 accacacgta gtcgtattca accgtaagtt gacgagatag cgaagcagac agcgtttcga
     2521 tacaacccga aggaatttta catccctggc tctgtactaa tgcatctgaa tgctggcgtg
     2581 gcgcagtgcc ttctggtgat acaacgaccg gccatttcag cactcggctt agcgttacgt
     2641 tctcctgaag tagcgggtga ttagggcgga caaccagctt cagcgattca agaaacagca
     2701 gttcgtaatt aagcccggtc atcagttcag gatctgacat ccgaccaatg ccgatatcga
     2761 tttccccggt tttcaaaccc gccagaatca tagggttact cattgtcgca acttgcaagg
     2821 tcgtctcttt ttgttgctga tgaaactgac ctataaccga aggtaatatc cccagtgccg
     2881 cagtaggtag tgcaccaatc ctgacgacat cattattaag accttcttta cgatgaagcg
     2941 actgtccggc agtgttgatg gcgtcaagaa ctctgactgc atgcgttaaa aattgttcgc
     3001 cgggtaaggt aagttgcgcc ccctgacgac cacgctcaaa caagcgagcg cccgtcagct
     3061 gctacagttc attcaatgtc ttagagagcg caggttgact caaattaagg gtttcagccg
     3121 cgcccccaaa gttccttgtt gtgcgacagc tacgaatgta tgaaggtggc gcaaacggat
     3181 gcgctgacta aacagactat ttttttccat aagcgatgtt aaaaacgaag cggtgtcgct
     3241 gacaagtgaa gttgtttgat tatgataact tgattgcaaa atataattaa caattaaagc
     3301 aattgtgtta cagcaaaatg gataatattg atgttttcgc ggcgagatca cagtttgtaa
     3361 attcttcccg ccagagtgaa tgcggttacc tacactccag attactgacc actggaggca
     3421 gacactatgg cgaacagcat cacggcggat gagattcggg aacagttttc gcaggcaatg
     3481 tcagccatgt accagcaaga agttccgcag tacggcccgc tgctggaact ggtagctgat
     3541 gtgaatctgg ctgtgctgga aaacaatcct caactgcacg aaaaaatggt aaatgcagat
     3601 gagctggcgc gactgaatgt tgaacgtcat ggggcgattc gcgttgggac tgcacaagag
     3661 cttgctactc ttcggcggat gtttgccatt atggggatgt acccggtgag ctattacgat
     3721 ctctcgcagg caggggggcc ggtacattcg acagcatttc ggcccattga tgatgcttct
     3781 ctggcgcgta atcccttccg cgtttttacc tccttactcc gccttgagct tatcgagaac
     3841 gaaattttgc gccagaaagc ggcggagatt ctgcgtcagc gcgatatctt caccccacgt
     3901 tgtcgacaac tgttagagga atatgagcag cagggcggtt ttaacgaaac acaggcacag
     3961 gaatttgtgc aagaggccct ggaaacgttt cgctggcacc agtcagcaac ggtagatgaa
     4021 gaaacctatc gcgccttgca caacgaatat cggttgattg ctgatgtggt ctgttttcct
     4081 ggatgccata tcaaccacct gacgccacgt acgctggata ttgaccgggt gcagtcgatg
     4141 atgcctgaat gcggaattga acccaaaatt ctcatcgagg ggccgccgcg ccgcgaggta
     4201 ccgattttac tacgccagac cagctttaaa gcactggaag agacggtgtt gtttgcgggg
     4261 cagaaacagg gcacgcatac cgcgcgcttt ggtgaaattg agcagcgtgg cgtggcatta
     4321 acgccgaaag ggcgacaact gtatgatgat cttctgcgta acgctggaac cgggcaggat
     4381 aatctcactc accaaatgca tttacaggaa accttccgca cttttcctga cagtgagttt
     4441 ttaatgcgtc agcaagggtt ggcatggttc cggtaccgtc tgacgccttc gggtgaggcg
     4501 catcgtcagg cgattcatct tggagacgat ccacagcctt taattgaacg tggttgggta
     4561 gtggcgcaac ccatcaccta tgaagatttc ttgcccgtta gcgcggcggg gatcttccag
     4621 tcaaatctgg gtaatgaaac gcagacacgc agtcacggta atgccagtcg cgaagcattt
     4681 gagcaggcgt tgggttgtcc ggttttggat gagttccagc tttaccagga agcggaagaa
     4741 cgcagtaaac gtcgctgtgg tttgctttaa attctgacca tccgcctttg caaaaatttg
     4801 cctgatttta caaacgaatc aggctcatcc catcgacata aaaaaaatgc cgatttatgc
     4861 atattctctc agttcaacaa ttggattatt aataaatatt gtctagagtg agcggtcata
     4921 aataagcact ttcttgccgc tgaaaacgac cagcgcggga ccattcacaa caccagaagg
     4981 actcactttc aggtatggat cgtagacgat ttattaaagg ttcaatggct atggccgccg
     5041 tgtgcggtac cagcggcatt gcttctcttt tttctcaggc ggcattcgcg gcagattctg
     5101 atattgccga cgggcaaacc cagcgttttg acttctccat tctacagtca atggcgcacg
     5161 acttagcgca aacagcgtgg cgtggtgcgc ctcgtccgtt acctgacacg ctggcgacaa
     5221 tgacgccgca ggcttataac agtattcaat acgacgccga aaaatcgctc tggcataacg
     5281 ttgagaaccg tcaactggac gctcagttct tccatatggg aatgggattc cgtcgccgcg
     5341 ttcgtatgtt ttctgtagat ccagcaacac atctggcgcg tgaaattcac tttcgcccgg
     5401 agttgttcaa atacaacgat gcgggtgttg atacaaaaca attagaaggg caaagcgatc
     5461 tcggctttgc cggttttcgc gtgtttaaag cccccgaact ggcgcgccgt gatgtagtat
     5521 catttctcgg cgcgagttat ttccgcgccg ttgatgatac atatcaatac ggtttgtcgg
     5581 cccgcggcct ggcgatcgac acttacaccg acagtaaaga agagttcccc gactttaccg
     5641 ccttctggtt tgatacggta aaaccggggg caactacctt taccgtttat gcgttgctcg
     5701 atagcgccag cattactggt gcctataagt tcactatcca ttgtgagaaa agtcaggtga
     5761 ttatggatgt ggaaaatcac ctgtatgcgc gcaaagacat taaacagctg ggcattgcgc
     5821 cgatgaccag tatgttcagc tgcggtacta atgaacgtcg gatgtgcgat acaattcatc
     5881 cgcaaattca tgactctgat cgtctgtcca tgtggcgggg caacggcgag tggatttgcc
     5941 gtccgctgaa taatccgcaa aaattgcagt tcaatgctta caccgacaac aacccgaaag
     6001 ggtttggttt attgcaactg gatcgtgact tctcccatta tcaggacatt atgggctggt
     6061 ataacaaacg cccaagtctg tgggtggaac cgcgtaacaa gtggggtaag ggcaccatcg
     6121 gcctgatgga aatcccaaca acgggcgaaa cgctggataa cattgtctgt ttctggcagc
     6181 cagaaaaagc tgtaaaagca ggtgatgagt ttgcattcca gtatcgtctg tactggagtg
     6241 cgcaaccgcc tgttcattgc ccattagcgc gcgttatggc gacgcgtacc ggcatgggcg
     6301 gtttcccgga aggttgggcg ccaggtgaac actatcccga aaaatgggcg cgtcgttttg
     6361 ccgtcgattt cgttggtggt gatctgaaag ctgccgcgcc aaaaggcatt gagccggtga
     6421 ttacgctttc cagtggggaa gcgaagcaaa tcgaaattct ctatattgaa cccatcgatg
     6481 gttatcgtat tcagtttgac tggtatccga cttcggactc cactgatccg gtcgatatgc
     6541 ggatgtatct acgttgtcag ggggacgcta tcagtgaaac atggctgtat cagtatttcc
     6601 cgccagcgcc ggataaacgt cagtatgttg acgaccgcgt gatgagttaa ttgttttttc
     6661 ttcggcacct tcttcgggag gtgccgtctg gttaaacacg atcccgctcg catttttccc
     6721 taagttaaat gagtaatctg atggtgtgta tttcagatac accttgtcag ccactaacag
     6781 ggagtgcgta tgtttccaga ataccgagat ttaatatccc gtctgaaaaa cgaaaatcct
     6841 cgctttatgt ccttgttcga taaacacaat aaacttgatc atgaaattgc cagaaaggaa
     6901 ggtttcgacg gtcgagggta caatgcggaa gtggtccgca tgaaaaaaca aaagctacag
     6961 ttaaaagatg agatgctcaa aatcctgcag caggagagcg tcaaaggggt gtaaactttc
     7021 ctaagccgcc agccaggcgg cttttttaac aacagcatgg attgactgga gataagatga
     7081 ctgaaacgat aaaagtaagc gaatcacttg aattacatgc tgttgcggaa agtcacgtca
     7141 cacctcttta tcagttaatc tgtaaaaata aaacctggtt acagcagtcg ctaaactggc
     7201 cgcagttcgt tcagagtgaa gaggacacgc gaaaaacggt gcagggtaat gtgatgttgc
     7261 atcaacgcgg ctatgccaaa atgttcatga ttttcaaaga agatgaactt atcggcgtta
     7321 tctcgtttaa tcgtattgaa ccactgaata aaactgctga aatcggctac tggctggacg
     7381 aatctcatca ggggcagggg atcatttctc aggcgctgca ggcattgatt catcattacg
     7441 ctcagtctgg tgaacttaga cgcttcgtga tcaaatgtcg ggtggacaat ccgcaaagca
     7501 accaggtcgc tttgcgcaat ggttttatcc ttgaaggttg cctgaaacag gctgagttcc
     7561 tgaatgatgc ctatgatgat gtgaacttat acgcgcgtat tatcgattca taataaccct
     7621 gccagcggcg ttcgcgtaat gcgctcctcg ccgttaatga cttttggacc acggacatga
     7681 accgtgtcgc catcaaaggc ttcaacgacg gcgtggtcgg ttaactccac atggttttca
     7741 attatcaccg cacctgaaat acggctctca ccttgtatta caacgtgctc gtcgagcaga
     7801 atcggttcac cacgtaccac ggcatttccg ccaatcaaga catgatgttt taacacacaa
     7861 ttaccttcca caatggcata ttccgccacc tgcgaactgt aatgaatcgt cggaatggca
     7921 tcttcttcta tgccagcttt cacctgcgcg tgaccgtaga ctttagcgca atcgcatagc
     7981 cagacgttgt tctcttcatt accttcaaca ctggcaaaat caaaaacttc ggcgcgatgt
     8041 tcaataaaag cataccggac gacggcatcg ccataaattt gtgcctggtg gacaatacgc
     8101 gaggcgctaa cccttgcgcg atcataaatt tggagcagga gttgatggtc gggcgttaag
     8161 ccttgtgcgg cgacgatcat agaatgttga tcaattaagg cgtgaccaaa tattctacat
     8221 tgcccgtaaa ctaatgagtc atgaatggtg acactgtcac ttatatatgc accctgactg
     8281 atttcactat tatcgatcca gacgttatcc gttgcgtaaa cctctcccca cagcacgctg
     8341 gtgccggtga tacgcgtatt accagaaatc accgttccgc cgaacgcaat agcattctgg
     8401 tcgtaaatcc agcaatttcc ttcctatgct aacaccgttt cgcgatcgat ccagccgcca
     8461 gcggttcctg ctatcacatc gttaaaatcg ctaatggcga taatctgccg taataacaca
     8521 ctttttttag tgccatcttc ctgataacta aaggctcgct gttcttcact tagacgatat
     8581 ttgcgcatag cgttttctca caggtgactt actataaccg tagcaaattc tgcggctctg
     8641 gctatgctcg agaaaattcc ataaaatgca tttcaaatat actttataaa ttaaacaaaa
     8701 tgagtaagaa gatgcagagc gataaagtgc tcaatttgcc ggcaggctac tttggtattg
     8761 tgttggggac gatagggatg ggatttgcct ggcgctatgc cagccaggtt tggcaggtca
     8821 gccactggtt aggggatggg ctggtgattc tggcgatgat catctgggga ttattaacta
     8881 gcgcatttat tacccgactc atacgctttc cgcatagcgt gctggcggaa gttcgccatc
     8941 cagtgctgag cagttttgtg agtttgtttc cggcaacgac gatgctggtg gcgattggtt
     9001 ttgttccgtg gtttcgccca ctggcggtgt gcctgttcag ttttggtgtc gtggttcagt
     9061 tggcttatgc cgcctggcaa actgcgggat tatggcgcgg atctcaccct gaagaagcta
     9121 ccatgcctgg actgtatctg ccgacagttg ccaacaactt tatcagcgca atggcctgtg
     9181 gtgcgttggg ctacaccgac gccggtctgg tgtttttagg cgcaggcgtt ttctcatggc
     9241 taagccttga accggtgatc ttgcagcgtc tgcgcagttc gggagaatta cccacggcac
     9301 tgcggacatc actcggcatt cagctcgctc ctgcgctggt ggcctgtagt gcctggttga
     9361 gcgtcaacgg cggcgagggt gatacgctgg cgaaaatgct ttttggttat ggactgctgc
     9421 aactgctgtt tatgctacgt ctgatgccat ggtatctctc ccagccattt aatgcttcat
     9481 tctggagttt ctcgttcggc gtatctgcac tggcaaccac cggtttgcat ctggggagtg
     9541 gcagcgaaaa tggatttttc catacgctgg cggtaccgct gtttatcttt accaatttta
     9601 ttattgcaat actgctcatc cgtacttttg cgcttctgat gcagggaaaa ttgttagtca
     9661 gaaccgagcg cgctgtttta atgaaagcag aggacaaaga atgatcattc gtgacgaaaa
     9721 ctattttact gataaatatg aattaacccg cacacactct gaagtactgg aagcggtgaa
     9781 agtggttaaa ccgggtaaaa cgctggatct gggctgtggc aatggtcgta acagtcttta
     9841 cctggcagcc aatggttatg atgttgacgc atgggataaa aatgccatga gtatcgccaa
     9901 tgtagagcgc attaaatcca ttgaaaatct ggataattta cacacccgag tcgttgatct
     9961 gaataacctc acatttgata gacagtacga ttttattctt tcgactgtgg tactgatgtt
    10021 ccttgaggct aaaaccatcc cagggctgat tgccaatatg caacgttgca ctaaacttgg
    10081 tggttacaac ctgattgtgg cggcgatgga taccgctgat tatccatgta ccgtcggctt
    10141 cccgtttgcc ttcaaagagg gagaattacg tcgatattac gaaggctggg agagggtgaa
    10201 atacaatgaa gacgtcggcg agctgcaccg caccgacgcc aacggtaatc gtattaaact
    10261 gcgtttcgcc acgatgctgg cacgtaaaaa atgacccgct aagaataagg cgcgtgaaaa
    10321 ttccccacgc tgagatgatt tactgttctt cttttcggta agcatatttt ttatcgaagg
    10381 gatgtgaaat taatcacagt agtcgaagtt ttttagcagc ttaacttact gaaatttaac
    10441 tactgatgat tgacttagcc cctttttcgg cattgactat gtcgtctgaa aaggggctga
    10501 aaaatttatt ttcaccaaca ctttttttgc cacaacacga agcggcgctt tttgctataa
    10561 cttaaaaagt aatataatca tctcaggaaa ctattcatgc gtaccacatc atttgcgaaa
    10621 gttgcagctt tatgcggctt gttggctctg tctggttgtg cctctaaaat cacccagcca
    10681 gataaatatt ctggtttttt
//
LOCUS       DADMIB010000149        10661 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.150, whole genome shotgun sequence.
ACCESSION   DADMIB010000149 DADMIB010000000
VERSION     DADMIB010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10661
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.150"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            311..1609
                     /gene="kgtP"
                     /locus_tag="JNZ89_003453"
     CDS             311..1609
                     /gene="kgtP"
                     /locus_tag="JNZ89_003453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate permease"
                     /protein_id="HAY8937205.1"
                     /translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC
                     SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM
                     MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF
                     YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL
                     DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM
                     HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVS
                     SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYV
                     ALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL"
     gene            complement(1606..1950)
                     /locus_tag="JNZ89_003454"
     CDS             complement(1606..1950)
                     /locus_tag="JNZ89_003454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiM family lipoprotein"
                     /protein_id="HAY8937206.1"
                     /translation="MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAM
                     LSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGA
                     STGYTVWQLTRH"
     gene            complement(1975..3330)
                     /gene="pssA"
                     /locus_tag="JNZ89_003455"
     CDS             complement(1975..3330)
                     /gene="pssA"
                     /locus_tag="JNZ89_003455"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HAY8937207.1"
                     /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI
                     ASAKQRICIVALYLEQDDGGKGILNALYKAKRQRPELDVRVLVDWHRAQRGRIGAAAS
                     NTNADWYCRMAQENSGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
                     HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF
                     RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL
                     PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRLFLSR
                     LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD
                     PQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
                     L"
     gene            complement(3444..6104)
                     /gene="pat"
                     /locus_tag="JNZ89_003456"
     CDS             complement(3444..6104)
                     /gene="pat"
                     /locus_tag="JNZ89_003456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysine acetyltransferase"
                     /protein_id="HAY8937208.1"
                     /translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPV
                     LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA
                     PASQHEDLRACALRHNMRLLGPNSLGLLAPWQGLNASFSPVPIKRGKLAFISQSAAVS
                     NTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
                     SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA
                     VETLSHMRPLHGDRLMIISNGAAPAALALDALWSRNGKLATLSEETCQKLRDALPEHV
                     AISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKH
                     HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
                     ETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE
                     AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
                     RIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMN
                     LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG
                     SEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ
                     QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTR
                     AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVA
                     LARKLGFNVDIQLEEGIVGLTLNLAQREES"
     gene            complement(6136..6834)
                     /locus_tag="JNZ89_003457"
     CDS             complement(6136..6834)
                     /locus_tag="JNZ89_003457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311476.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DTW domain-containing protein"
                     /protein_id="HAY8937209.1"
                     /translation="MTENTVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCS
                     TITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNP
                     DYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS
                     VDLSRLSAYRLREALAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKT
                     QHLGSITAEQLESV"
     gene            complement(6903..7322)
                     /gene="trxC"
                     /locus_tag="JNZ89_003458"
     CDS             complement(6903..7322)
                     /gene="trxC"
                     /locus_tag="JNZ89_003458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HAY8937210.1"
                     /translation="MNTVCTHCQSINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET
                     LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF
                     GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL"
     gene            7529..8566
                     /locus_tag="JNZ89_003459"
     CDS             7529..8566
                     /locus_tag="JNZ89_003459"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HAY8937211.1"
                     /translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRA
                     DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR
                     QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
                     ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC
                     AHFGVKGVVVQDAALLESGAAIRTAEGGAELVQSITGDNIVNVLDDFRQAGYTVVTTS
                     SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV
                     LLGEWWRQNKA"
     gene            complement(8614..9303)
                     /gene="ung"
                     /locus_tag="JNZ89_003460"
     CDS             complement(8614..9303)
                     /gene="ung"
                     /locus_tag="JNZ89_003460"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HAY8937212.1"
                     /translation="MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDV
                     FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPG
                     FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV
                     FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPI
                     DWMPVLPAESE"
     gene            9608..9991
                     /gene="grcA"
                     /locus_tag="JNZ89_003461"
     CDS             9608..9991
                     /gene="grcA"
                     /locus_tag="JNZ89_003461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HAY8937213.1"
                     /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVV
                     AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVIARTFTESL"
     gene            complement(10047..10634)
                     /gene="eamB"
                     /locus_tag="JNZ89_003462"
     CDS             complement(10047..10634)
                     /gene="eamB"
                     /locus_tag="JNZ89_003462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/O-acetylserine transporter"
                     /protein_id="HAY8937214.1"
                     /translation="MTPTLLSAFWTYTLITAMTPRPNNILALSSATSHGFRQSTRVLA
                     GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA
                     KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW
                     ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY"
BASE COUNT         2653 a         2704 c         2739 g         2565 t
ORIGIN      
        1 aaaggccatc cgtcaggatg gcctttttgc attggcgcag aaaaaatgcc tgatgcgacg
       61 ctgcgcgtct tatactccca catatgccag attcagcaac ggatgcggtt tccccaactt
      121 gcctacttcc atacgtgtcc tccttaccag aatttatcct taagctcctc aataaccatt
      181 ttcctgctaa ctaaattcat ggttaatgtt gcataataat acgtaacaaa tgtataacat
      241 tttctttacc aaaagaaata aacaaaagtg accaacaaaa gcatcggatt acggcaggag
      301 acataatggc atggctgaaa gtactgtaac ggcagacagc aaactgacaa gtagtgatac
      361 tcgtcgccgc atttgggcga ttgtgggggc ctcttcaggt aatctggtcg agtggttcga
      421 tttctatgtc tactcgttct gttcactcta cttcgcccac attttcttcc cttccgggaa
      481 cacgacgact caactactac aaacagcagg tgtttttgct gcgggattcc tgatgcgccc
      541 aataggcggt tggctatttg gccgcatagc cgataaacat ggtcgcaaaa aatcgatgct
      601 gttatcggtg tgtatgatgt gtttcggatc gctggttatc gcctgcctcc caggttatga
      661 aactataggt acgtgggctc cggcattatt gcttctcgcg cgtttatttc agggattatc
      721 cgttggcgga gaatatggca ccagcgccac ctatatgagt gaagttgccg ttgaagggcg
      781 caaaggtttt tacgcatcat ttcagtatgt gacgttgatc ggcggacaac tgctagccct
      841 actggttgtc gtggttttac aacacaccat ggaagacgct gcactcagag agtggggatg
      901 gcgtattcct ttcgcgttag gagctgtgtt agctgttgtg gcgttgtggt tacgtcgtca
      961 attagatgaa acttcgcaac aagaaacgcg cgctttaaaa gaagctggat ctctgaaagg
     1021 attatggcgc aatcgccgtg cattcatcat ggttctcggt tttaccgctg cgggctccct
     1081 ttgtttctat accttcacca cttatatgca gaagtatctg gtaaatactg cgggaatgca
     1141 tgccaacgtg gcgagtggca ttatgactgc cgcattgttt gtattcatgc ttattcaacc
     1201 actcattggc gcgctgtcgg ataagattgg tcgccgtacc tcaatgttat gtttcggttc
     1261 gctggcagcc atttttaccg ttcctattct ctcagcattg caaaacgttt cctcgcctta
     1321 tgccgctttt ggtctggtga tgtgtgccct gctgatagtg agtttttata catcaatcag
     1381 tggaatactg aaggctgaga tgttcccggc acaggttcgc gcattaggcg ttggtctgtc
     1441 atatgcggtc gctaatgcta tatttggtgg ttcggcggag tacgtagcgt tgtcgctgaa
     1501 atcaatagga atggaaacag ccttcttctg gtatgtgacc ttgatggccg tggtggcgtt
     1561 tctggtttct ttgatgctac atcgcaaagg gaaggggatg cgtctttagt gacgggtcag
     1621 ttgccagacg gtatagccgg tgcttgcacc ggcgacatcc caggccaaat ccttccagct
     1681 ccagccgctc ccttcggggc ggctatccca aagctctttt gacgccccca aactgacaga
     1741 gaacatcaat ccaaacatgg cactgcgatc ccggctcatc ccctgatgct gtgaatattc
     1801 atttccggcg gcggaaagca tcgccgaggc gataaagtgt tgagctttat cctgcccgct
     1861 ccagctatcg ttagccatat ggctgcatcc agaaagtaac aatagcgaac agacaaaaag
     1921 aatacgcaaa acgtggcctc caaaaaacaa accccgtaca ggacggggtt gtgattacag
     1981 gatgcggcta attaatcggt cgatgcggat acggcgcaaa cggcggatga gtttacgaac
     2041 cttcaccgga taatcggcaa tactttgcag atcgcgatag tgcttaacga tggtggtatg
     2101 ctcgcggatc agctccagtt ctttctctcg ctgcggcgca agctccagtt gtggatcgtg
     2161 gatcaaaatg gcgttttcca gatccagacg ccaggcgcgc gggttcaggt tattaccggt
     2221 gatcaacatc cacttatcat caacccacat ccctttcagg tgataggtgt tgtcgtcatc
     2281 tttccataac cgaaccacta gctggtcagt attgacgtaa tactgcaaac ggctcaggaa
     2341 aagacgcaga ttgatctcat agagataagg caatgcgcca attatcttga aaggttcatc
     2401 ttccggaatg tagaagtcgt tcgcggtttt atcaccaaca ataatttcga cctttttccc
     2461 ttcgcgcagc aactggataa tattgcgcac aaggattgct ggcaggttga agtatggcgt
     2521 acagatggtt agtttctgct cggcacaagg cataagatgg aaaatggtct tgttcaacag
     2581 actcgatttc cccagcccca ctagcggcgt tacggaaagc tgatcgttgt cggcatcgcc
     2641 ctggaaatga taagcggcat cacgcagctc ctggcggaac agacgaatat cgttcttgat
     2701 ttccgggctt tttggccgat taacatcatc cagacgatta acgccgcggc cattcataat
     2761 attctgtgta acccattcaa acataatgtc tgacatctta cggttacgga taagatgata
     2821 acggtcgtag cgatatttat cgtgctgatg caggtaaaca tcgttcaggc tggcaccgct
     2881 ataaagtacg ctatcgtcga tgataaagcc tttaaagtgc agaacaccaa gggcttcacg
     2941 ggtattgatt ggaacgccat aaaccggaac atctacgccc gaattttcct gcgccatgcg
     3001 gcagtaccag tcagcgttag tgttagatgc cgcagcgcca atgcgtccac gttgtgcacg
     3061 atgccagtcg accagcaccc gcacatccag ttccggacgc tgccttttag ctttatacaa
     3121 cgcgttcaga atgcctttgc caccgtcatc ctgttcgaga tacagggcga caatgcaaat
     3181 gcgctgcttc gcgctggcta ttttttccag cagcgtctcc cggaagtcgg cgggagcgta
     3241 aaagaaatcg acatcatcaa ctgattgaga aatcttgggt agttgggcaa ggtgttgttg
     3301 atgtttatta cgcttaaatt ttgacaacat cacagtgcat ttcttctctg ttcattgaag
     3361 gatcctctgt gcaatgcaga cgacataagc gggcaataat aacaccagtc ccgattaagt
     3421 agtcaacatt tccagtacct tactcatgat tcctcgcgtt gggcaagatt tagcgtaagc
     3481 ccaacgatcc cctcttcgag ctggatatca acgttaaacc cgagcttgcg ggctagcgcc
     3541 accatgccac gattgtttgg catcgtaata ccattcagac gttgtagtcc gtgatctcgc
     3601 gtataggtaa tcaacttttc cattaagcgt cgacctaagc ctaacccttt gagatccgag
     3661 cgaaccagca cagcaaattc ggcatcgatg ttatcaggat cggaaatcgc acgcgtgacg
     3721 ccgaggatct cttccgtttg atcaatacgt cgtaccgcta caaacgccat ttcccgatcg
     3781 tagtcgatct gtgtcatgtt ggctaaatct tcatgggtaa attcgttgat ctcgctaaag
     3841 tagcggtaat aaagatcttc tttggtgact cgcgaaatga attgctgaag ttgtggctca
     3901 tcttctggca aaatcgggcg gaacaagcag cgttcaccgt ttttcaattc tacccattct
     3961 tccagctgat gcggataagg gcgcactgcc agccgactct cgttatcgcc ttcaaacggc
     4021 gagatatcca gcgtgacatc cagcgcggta aattcactgc cagaagccag caaaggatga
     4081 atatccagac gctgaatttc cgggcaatcg acaatcaagt tggaaacctg caccagaagc
     4141 tggctcaagc ctgcaacatc caatgggcgt agcgcactgc gcgcacgaat ctttttactt
     4201 ttgatcccct gaataaccag atagcgggcc aggttcatgt tcagcggcgg cagtgcgacg
     4261 acggcttgat cttcaggacg ccactccaca ccgccttcac ccagcatgat caacggcccg
     4321 aaaaccggat cgtgcccaac cacaacccgc aactcctgag cgccagcacg gttagccata
     4381 ctttgcacca acaggccgtg gatccgcgcc tgcggccagg ccatttttac gcgatcgaaa
     4441 atggcgtttg ccgcttgctg gacttcattg gctgtacgca agtacagcat gacgccctga
     4501 acttccgatt tatgtggaat atccggcgaa cgcaatttca gcgccaccgg ataaccaatc
     4561 tgttcggcaa tatgcaccgc ttcggtgcta tcgctggcaa tccaggtagg gagcgtgttc
     4621 atgccatacg cttgcaggat gggctgaact tcatgggtat cgagcgacgt agccccttcg
     4681 gcaatcgcct gttgcaacag aagatgcgct tctgcggtat tggaagtcag attgctgggc
     4741 aacgccggcg tttcgcgtag ttgcttctga ttacgccggt actccaccat atgcataaaa
     4801 gcagtgatgg ttccttccgg ggtacggtag gtcggcagcc cggcttcgct gaataaacgt
     4861 cgtgcctctt gcgaggagtg ctcgccgcac cagttcgtca gcaaagagac atatttgctg
     4921 cggggatgat gctttaccgc ttcaattaat acttgcgcgc tttctgttgc gggagcagcg
     4981 gcgctgggcg aatgaataac catcagcgcg tcaaaatcct ggctgtggag cagaatatcc
     5041 agcgttttaa tatagtgctc actgctggcg tcatcgcgta gatcgagcgg gttagatatt
     5101 gccacatgtt ctggcagtgc atcgcgcagt ttctggcagg tttcttcgct tagcgttgcc
     5161 agcttgccat tgcgtgacca taaggcatcc agcgccagcg cggcaggcgc agcaccgttg
     5221 ctgataatca tcagccggtc gccatgtagc gggcgcatat ggctaagggt ttccaccgcc
     5281 gaaaacagct cgtgggtgtc ctgtacccgc aacaaaccgg cacgctgaat agccgcatcc
     5341 catgccgggt ccattcctgc cgtggtgttg agcagtcgct gtgccgccgg gctacgtccg
     5401 cttttaatca ccagaatcgg tttattacgc gaggcactac gggccgccga aacaaagcgt
     5461 cgcgcgtcgc ttaactgttc gagatagagc aggatggcgc tggttttact gtcgcgtgcc
     5521 agatagtcaa gcaattcatc aacgtcgata tccaggctgt cgccgagcgc aataaagtag
     5581 gaaaagccca tcttacgctg ttgcgcccag tcgaggatgg tgttggagac ggcagccgat
     5641 tgcgaaataa acgccagctt gccgcgttta atcggcacag gcgaaaagct ggcattcaga
     5701 ccttgccagg gagccagtaa acccagactg tttggtccaa gcaggcgcat gttatggcgc
     5761 agggcgcagg cgcggagatc ttcgtgttgc gatgccgggg cggaaagaat aatgcaggtt
     5821 ttacagcctt tctcgccgag ctcttccaga agagcaagat tacggctggc attggtacat
     5881 aaaaccgcaa ggtcgggtgt aaagggcaag ctggcaatat ccggccaggc caacacaccc
     5941 aacaccgctt tccaggctgg cgtcaccggg agtaccggtc cgttaaagcc tcccgccagc
     6001 aggttacgca tcatcaggta acctgcgcga ttgggtttca tcgacgcgcc aattaccgct
     6061 atcgattttg gtcgcagtag tgcttccagt cctcgctgac tcataccggt ctcccgcaga
     6121 agtgaccgaa tgattttaaa cgctttctaa ctgttctgct gtgatgctac ccagatgttg
     6181 cgttttccct gccagatagc gtgttttaaa gcgggtaaaa tgctcgccta accctgctgc
     6241 cgccccggta tcgccggcca tatctaacag tgcgatggct acctcggcag tacaatattg
     6301 gccttcagcc agggcttcac gcaggcgata ggcagaaagc cgggaaagat cgacggaaat
     6361 gacgggaaga ttatccagat acggactttt acgaaacatc ttgcgagctt ccggccaggt
     6421 accatcgagc atgataaaca gcggtggctt accggcaggt ggtgtgaaga tcacttcccg
     6481 ttgctcatca gcatacgagg cgggaaagac caccattggc tgataatccg ggttttgtac
     6541 cagatccagc aaatcctgcg agggttcggt acgcgaccat tgaaacgcaa cggtatcagg
     6601 caaaatatca gcaatcagac gcccggtatt actgggcttc attggctcgg tgtcgaacat
     6661 cagcaaacag aagcgacttt ttgcttgtgc tggggtaatt gtcgaacaga gacataattt
     6721 ctctggcaaa agacagcgtt ggcagcgacg aacgcgatta ccgcgggcaa gaaaaggacg
     6781 tgttgcgcgc gcaatacgct cggcgcgtaa ctggagaaca gtgttttcgg tcataagaga
     6841 gcgtcgaaaa aacgccattg tcgcagagga gaaaacgggg cacaagatgc gccccggtaa
     6901 gattaaagag attcgttcag ccagctatcg aacggagctt tcggtactgc gccattaagc
     6961 atgtcgacaa cctgaccgtt tttgaaaatc atgatcgtcg gtatactacg aattccaaag
     7021 cgactgctca attcacgttc agcttcggta ttcactttca caaagcgcac tttaccgcta
     7081 cgctcttgcg cgacatcttc aaaaattggt gcgaaattac ggcaggggcc gcaccacggt
     7141 gcccagaagt cgatcaccac aggtagatca tccttcagca atttgtcgag tgtttcaccg
     7201 gtcgcattaa tcacctctcc gtcaaacaag tcgtgaccgc agcgtccgca ttttgccgca
     7261 tcttcgatcc gatcgtcggg aatgcgattg atggactgac aatgggtaca aacggtattc
     7321 ataactaacc tcgggatgag taaggagact tatcggcaac gacgccggta tgtttctaat
     7381 atgttacata ttatcgggga cattgttcca gacaacaatc tgttttattc aataggtatg
     7441 atagtcgcag gctttggtac gaaatcatgg agaaccgcgc ggacttcggg taatctgcgc
     7501 gcttcgcgca gcgctggtgg agaaaagcat gaacgatgaa atgaaaggta aaagcggcaa
     7561 ggtcaaagtg atgtatgtcc gcagtgatga tgattctgat aaacgtaccc acaacccgcg
     7621 taccgggaaa gggggcgggc gtccaggaaa atctcgtgct gacggtggcc gtcgccccgc
     7681 ccgcgatgac aaacagagtc agccccgtga ccgcaagtgg gaagattcgc cgtggcgcac
     7741 ggtttcccgc gcgccgggtg atgagacgcc ggaaaaggcc gatcacggtg gcatcagtgg
     7801 taaaagtttt attgatccgg aagtgttgcg tcgtcagcgt gcggaagaaa cccgcgtcta
     7861 cggcgaaaac gcctgtcagg cactgttcca gagccgtccg gaagcaattg ttcgcgcctg
     7921 gtttatccag agcgtaacgc cacgttttaa agaagccttg cgctggatgg cggcaaaccg
     7981 caaagcgtac catgtggtgg atgaagctga attgacaaaa gcgtcaggca cggaacatca
     8041 cggcggcgtt tgcttcctga tcaaaaagcg taacggtaca accgtgcagc agtgggtaag
     8101 ccaggcaggc gcgcaggatt gcgttctggc actggaaaac gaatctaacc cgcataacct
     8161 gggtggcatg atgcgcagct gcgcgcactt cggcgtgaaa ggtgtcgtgg tgcaggatgc
     8221 ggcactgctg gagtcggggg cggctatccg taccgcagaa ggcggcgcag agctcgttca
     8281 gtcgattact ggcgacaaca ttgttaacgt gctggatgat ttccgtcagg caggttacac
     8341 cgtagtgacc acttccagcg agcagggtaa accgctgttc aaaactagtc tgccagcgaa
     8401 aatggtactg gtgctgggtc aggaatatga agggttaccg gatgccgcac gcgatccgaa
     8461 cgatctgcgc gtgaagattg acggtacggg caacgttgcc gggctgaata tctctgtcgc
     8521 aaccggcgtt ttgcttggtg aatggtggcg tcagaataaa gcctgataaa tcagccgggt
     8581 ggcaactctg ccatccggca tttccccgca aatttactca ctctctgccg gtaatactgg
     8641 catccagtca atcggcgtct cgccacgttg ttccagccac tgatttgcca gcacaaaatg
     8701 gttgcagcca aagaatccac gatgcgccga aagcggcgac ggatgcggtg ctttcagtac
     8761 atgatggcgt tgcttatcta taatcgcccc tttcttttgc gcatgtgatc cccacaacaa
     8821 aaacaccacg ccttcgcggt gctggttaat caggctgatg actttatcag taaacgtctc
     8881 ccaaccgagg ctggcgtggg aatgcgcctg acctgcgcga accgtcaaca cagtattgag
     8941 cagcagaacg ccctgacgcg cccagctttc gagatagcca tgattagggc gggtgaagcc
     9001 cggaatagta ttttccagct ctttatacat attcaataat gacggaggaa tggcaatgcc
     9061 gggacgaacg gaaaatgcca gaccatgcgc ctgtcccggt ccgtgataag gatcctggcc
     9121 gagaatcacc actttaacgt cacccaactc ggtaaagcgg aacgcgttaa agacatcttt
     9181 ttgtggtgga tagatagtga cgccggactg ccgctcgctg gcgacggtct gaagggtatt
     9241 aagaaaataa ggttgttgct tctcttcagc cagcacgtca tgccaggtta attcgttagc
     9301 catctcgctc tcctgcgaat cttcaatccg cctagcttaa ctgcttcttt ctacagaaca
     9361 aaatcatgct cattttttag acttaaacga gtgcaaaaaa atgtaaattg gtaaaatttc
     9421 acacccgcat aagttgatgt aaaacaataa aatccattta cgaccacaat cgatgtgtgg
     9481 tttttattga tttaaatcaa agaatcaagg gtggttgagg agtatatata cactcaagca
     9541 acaatggttt taccaattag ccgcgacagg ctgaacaaat caaataattt tgccggggag
     9601 gcatcacatg attacaggta tccagattac taaagccgct aacgacgatc tgctgaactc
     9661 tttctggctg ctggacagcg aaaaaggcga agcacgttgc atcgttgcaa aagcaggtta
     9721 tgcagaagat gaagtggttg cagtaagcaa actgggtgac attgaatacc gtgaagttcc
     9781 agtagaagtg aaaccagaag ttcgcgttga aggtggtcaa cacctgaacg ttaacgttct
     9841 gcgtcgtgaa actctggaag atgcagttaa gcatccggaa aaatatccgc agctgaccat
     9901 ccgtgtatcc ggttatgcag ttcgctttaa ctctctgact ccggaacagc agcgcgacgt
     9961 tatcgctcgt acctttactg aaagcctgta aggcttaagt agcaagttac taagcggaag
    10021 agggcgacct cttccgcttt ttttcgttaa tagaaaatgc gtaccgcgca atagaccagc
    10081 aacagggcaa gcacgatatt taactggcga ccatactggc gaaacaatcg ctgaaacaga
    10141 tgccccgcca gcgcccagca cacattgcca aacgtcccaa tcatcgccag caaaacgctg
    10201 acgccaacta cccagcttag cgcctgtgtt tgcggcagaa caaacgtcga cagtgccgta
    10261 acaccgtaca aaatgatttt gacgttcaca aactgcaaag caaagctggc ccaaaagctg
    10321 attggttttg cctgaagtcc gtcttccttt gttgggctgg tggcgatttt ccacgccagc
    10381 cagacaatat atgccgcccc cgcccaactc aaaaggtgta ccgctgccgg gtcaatcact
    10441 gccagtgaaa atgaaatgcc cgcacacagt aacatcacaa tcaaaaatcc cagactcatc
    10501 cctgccagca cgcgggtact ttgacgaaat ccatgcgacg tagcagagct aagggcgaga
    10561 atattgttcg gtcttggcgt catagcggta atcagggtgt aagtccaaaa agcacttaaa
    10621 agggtcggtg tcacttgtta tctcctctgt tttggtagac a
//
LOCUS       DADMIB010000150        10445 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.151, whole genome shotgun sequence.
ACCESSION   DADMIB010000150 DADMIB010000000
VERSION     DADMIB010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10445
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.151"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(9..1907)
                     /locus_tag="JNZ89_003463"
     CDS             complement(9..1907)
                     /locus_tag="JNZ89_003463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HAY8937215.1"
                     /translation="MSQNDIIIRTHYKSPHRLHIDSDIPTPSSELINQFARQLITLLD
                     TSDLSSMLSYCITQEFTANCRKISQNCYSTALFIINFATSPIHAENILITLHYKKEII
                     PLFLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKKIHREKTIQPTVNLNGSAC
                     FLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALL
                     RHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQLVYGQ
                     LNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWADRYVRNCAIAILPL
                     LPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEIIEII
                     TAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKLLQTKSANETPG
                     LYISMLYGFDETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGLFAAMENNHP
                     LCVTRFLSKINGIAFKYKLSKANIMDLLKGATAHGTPVLYIAMSKGNEDVVLSYISTL
                     NIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFS
                     ADELKTYL"
     gene            2429..4357
                     /gene="thrS"
                     /locus_tag="JNZ89_003464"
     CDS             2429..4357
                     /gene="thrS"
                     /locus_tag="JNZ89_003464"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010245687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HAY8937216.1"
                     /translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL
                     VDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF
                     YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHAARETFANRGESYKVSIL
                     DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
                     YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
                     LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
                     PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI
                     PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
                     MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG
                     IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV
                     IEKLQQEIRSRSLKQLEE"
     gene            4361..4903
                     /gene="infC"
                     /locus_tag="JNZ89_003465"
     CDS             4361..4903
                     /gene="infC"
                     /locus_tag="JNZ89_003465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HAY8937217.1"
                     /translation="MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALE
                     KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQRVIQVKEIKFRPGT
                     DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES
                     FPTKIEGRQMIMVLAPKKKQ"
     gene            5000..5197
                     /gene="rpmI"
                     /locus_tag="JNZ89_003466"
     CDS             5000..5197
                     /gene="rpmI"
                     /locus_tag="JNZ89_003466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HAY8937218.1"
                     /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
                     RPKAMVSKGDLGLVIACLPYA"
     gene            5250..5606
                     /gene="rplT"
                     /locus_tag="JNZ89_003467"
     CDS             5250..5606
                     /gene="rplT"
                     /locus_tag="JNZ89_003467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016169860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HAY8937219.1"
                     /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFTALVEKAKAALA"
     gene            5729..5773
                     /locus_tag="JNZ89_003468"
     CDS             5729..5773
                     /locus_tag="JNZ89_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanyl--tRNA ligase operon leader peptide"
                     /protein_id="HAY8937220.1"
                     /translation="MNAAIFRFFFYFST"
     gene            6056..7039
                     /gene="pheS"
                     /locus_tag="JNZ89_003469"
     CDS             6056..7039
                     /gene="pheS"
                     /locus_tag="JNZ89_003469"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HAY8937221.1"
                     /translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT
                     LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE
                     NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
                     DTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
                     SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
                     PNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
     gene            7054..9441
                     /gene="pheT"
                     /locus_tag="JNZ89_003470"
     CDS             7054..9441
                     /gene="pheT"
                     /locus_tag="JNZ89_003470"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012905611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HAY8937222.1"
                     /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHG
                     VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD
                     FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
                     SVTPNRADCLGIIGVARDVAVLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLG
                     RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI
                     VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE
                     CAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVI
                     DITNEATLPKRATITLRRSKLDCLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS
                     WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ
                     EVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNR
                     VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESV
                     LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF
                     ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
                     FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD"
     gene            9446..9745
                     /gene="ihfA"
                     /locus_tag="JNZ89_003471"
     CDS             9446..9745
                     /gene="ihfA"
                     /locus_tag="JNZ89_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HAY8937223.1"
                     /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
                     KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE"
     gene            complement(10049..10189)
                     /locus_tag="JNZ89_003472"
     CDS             complement(10049..10189)
                     /locus_tag="JNZ89_003472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HAY8937224.1"
                     /translation="MSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQC
                     KQ"
BASE COUNT         2743 a         2364 c         2664 g         2674 t
ORIGIN      
        1 atagttggtt ataaatacgt ctttagttca tcagcactaa aactcaggct ttggctgatt
       61 acatttatag cagcataata tgtttctaca gttttataat gattatgatg aatggctata
      121 tgaacagctg acatgttgtc atgattttta gcggccaaca gtgtgaataa ctgacgttga
      181 ctaaaagaat atttttttgc aaaaatattc agcgtcgata tataagataa cacgacgtct
      241 tcattaccct tgctcatggc gatgtataat acaggggttc catgtgctgt agcgcctttt
      301 aataaatcca tgatgttagc tttgctcaac ttgtatttaa aggcgatgcc attaatttta
      361 gagaggaacc gtgtgacaca caaagggtga ttattttcca ttgcagcaaa caaccctagt
      421 tcaccatcac gtgttttcat tgctaaaata tccatcacta tttttttgtt taaaagctct
      481 tgtgctattg gagtggttaa tgcattcaga aagatatcga ttgtttcatc gaacccatac
      541 aacatggaga tatagagccc aggtgtttcg ttagcacttt tagtttgcag taatttaacc
      601 agattatctt catgaatgat atgattgtat atcagtgact gaatttcttg cataaatatt
      661 tttacgttgt cagtatgtcc gttcatcata gccagaaata aagcaggtgt accaacgcta
      721 ttctgcgcag ttattatttc aatgatttct ttttcaggga gtatgggcaa ctgtttgaat
      781 aatgtaataa gctgttgagt ctggcctgtg gccattatta acaacattgc cgatggatgt
      841 ataggggcaa atggcattcg tgatgcaata cccgcgaaaa tagcccctgg aactcccaca
      901 ggtaataggg gcagaatagc aattgcacag ttgcgaacat acctatcagc ccaggtctga
      961 gcatcgggac ctgaactgat gaacttatca agcgaaagaa agccccgtgc tgtcctgtgg
     1021 gtgcctctga cggcaacgtt ggtatcgttc gggtcgtaga cggacactac atagtttaat
     1081 tgtccataca ctaactgctt tattcgtagc cttactgaca aagtatgatt gtctatatat
     1141 aaaatcgcgg acatatgact gacattgttt gccatcattc gacaaaagaa aatatctaaa
     1201 gcgaagccaa aatccttact cgcgataacg cgactccctg caggaggatg gcgaagtaat
     1261 gctctgaact ccgcatcccg gactaagggg acatgctgct gtatggattc aacggaggag
     1321 taatgtttaa tcaggttgac tttgcctttt ccatttctca atgaatcaag ggcgtattgc
     1381 aatgacagat ggcgacaaaa aatagcgtca gaaggagatt gcaaaaaaca tgcactacca
     1441 ttgagattta ctgttggttg tatagttttt tctctatgga tttttttaga cagtttcata
     1501 caatggttac gatcttcggc agttaactgt tcctgctcaa tataatccag tatgcttcgc
     1561 aaatggttag ccttaatagg cgtggtttcc agaaataagg gaatgatttc ttttttatag
     1621 tgtaatgtaa taagtatatt ttctgcatgg atgggtgaag tggcaaagtt aatgataaaa
     1681 agggcagtgg agtaacaatt ttgtgatatt tttcgacagt ttgcggtaaa ttcctgagta
     1741 atacagtatg acagcatcga acttaagtca gaggtatcaa gtagggtgat gagttggcgc
     1801 gcaaattgat taataagctc tgatgaaggc gttggtatgt cgctatcgat gtgcaatcta
     1861 tgaggagact tataatgagt tctgataatg atatcgtttt gactcataat ctattcacct
     1921 tatatatact ggaggttttg aggatgatga ttaattatta tcgccagaac gaaatgtgca
     1981 cgaaaaattg ctataagaat tgtgtcactt ttatcattgt gatatgacca cttcgtcatt
     2041 aatctcatga tcgtttaaat actaccgcca aatcacgcaa cgaactttgc tggattcagt
     2101 ttatgctgct gtaaatccgc tcgcagtaaa cctttcagac gcaccgtgat gttatcagtg
     2161 gttctttaag cgttttgctg gtgtactcac tacaaacgaa ttgcgaatcg aatcaatgtg
     2221 aaacggaaag gtacaatctc ccttttttta gtgttaacat cgttcaaccg ggtggaaggt
     2281 gagaggttaa tgtctttcat ttgtgtacct gattgcgaac caatttagca tttgttggct
     2341 agatggtttc gcaatgaact gttaataaac aaatttttct ttgtatgtga tctttcgtgt
     2401 gggtcaccac tgcaaataag gatataaaat gcctgttata actcttcctg atggcagcca
     2461 acgccattac gaccacgctg taagccccat ggatgttgcg ctggacattg gtccaggtct
     2521 ggcgaaagcc tgtatcgcag ggcgcgttaa tggcgaactg gttgatgctt gcgatctgat
     2581 tgaaaacgac gcacaactgt cgatcattac cgccaaagac gaagaaggtc tggagatcat
     2641 tcgtcactcc tgtgcgcacc tgttagggca tgcgattaaa caactttggc cgcataccaa
     2701 aatggcaatc ggcccggtta ttgacaacgg tttttattac gacgttgatc ttgaccgcac
     2761 gttaacccag gaagatgtcg aagcactcga gaagcggatg catgagcttg ctgagaaaaa
     2821 ctacgacgtc attaagaaga aagtcagctg gcacgcagcg cgtgaaactt tcgccaaccg
     2881 tggggagagc tacaaagtct ccattcttga cgaaaacatc gcccatgatg acaagccagg
     2941 tctgtacttc catgaagaat atgtcgatat gtgccgcggt ccgcacgtac cgaacatgcg
     3001 tttctgccat catttcaaac taatgaaaac ggcaggggct tactggcgtg gcgacagcaa
     3061 caacaaaatg ttgcaacgta tttacggtac ggcgtgggca gacaaaaaag cacttaacgc
     3121 ttacctgcag cgcctggaag aagccgcgaa acgcgaccac cgtaaaatcg gtaaacagct
     3181 cgacctgtac catatgcagg aagaagcgcc gggtatggta ttctggcaca acgacggctg
     3241 gaccatcttc cgtgaactgg aagtgtttgt tcgttctaaa ctgaaagagt accagtatca
     3301 ggaagttaaa ggtccgttca tgatggaccg tgtcctgtgg gaaaaaaccg gtcactggga
     3361 caactacaaa gatgcaatgt tcaccacatc ttctgagaac cgtgaatact gcattaagcc
     3421 gatgaactgc ccgggtcacg tacaaatttt caaccagggg ctgaagtctt atcgcgatct
     3481 gccgctgcgt atggccgagt ttggtagctg ccaccgtaac gagccgtcag gttcgctgca
     3541 tggcctgatg cgcgtgcgtg gatttaccca agatgacgcg catatcttct gtactgaaga
     3601 acaaattcgc gatgaagtta acggatgtat ccgtttagtc tatgatatgt acagcacttt
     3661 tggcttcgag aagatcgtcg tcaaactctc cactcgtcct gaaaaacgta ttggcagcga
     3721 cgaaatgtgg gatcgtgctg aggcggacct ggcggttgcg ctggaagaaa acaacatccc
     3781 gtttgaatat caactgggtg aaggcgcttt ctacggtccg aaaattgaat ttaccctgta
     3841 tgactgcctc gatcgtgcat ggcagtgcgg tacagtacag ctggacttct ccttgccgtc
     3901 tcgtctgagc gcctcctatg tgggcgaaga caacgagcgt aaggtaccgg taatgattca
     3961 ccgcgcaatt ctggggtcga tggaacgttt catcggtatc ctgaccgaag aattcgctgg
     4021 tttcttcccg acctggcttg cgccagttca ggttgttatc atgaatatta ccgattcaca
     4081 gtctgaatac gttaacgaat tgacgcaaaa actatcaaat gcgggcattc gtgttaaagc
     4141 agacttgaga aatgagaaga ttggctttaa aatccgcgag cacactttgc gtcgcgtccc
     4201 atatatgctg gtctgtggtg ataaagaggt ggaatcaggc aaagttgccg ttcgcacccg
     4261 ccgtggtaaa gacctgggaa gcatggacgt aaatgaagtg atcgagaagt tgcaacaaga
     4321 gattcgcagc cgcagtctta aacaattgga ggaataaggt attaaaggcg gaaaacgagt
     4381 tcaaacggcg cgccctaacc gtatcaatgg cgaaattcgc gcccaggaag ttcgcttaac
     4441 aggtctggaa ggcgagcagc ttggtattgt gagtctgaga gaagctctgg agaaagcaga
     4501 agaagccgga gtagacttag tcgagatcag ccctaacgcc gagccgccgg tttgtcgtat
     4561 aatggattac ggcaaattcc tctatgaaaa gagcaagtct tctaaggaac agaagaaaaa
     4621 gcaaagagtt atccaggtta aggaaattaa attccgtcct ggtacagatg aaggcgacta
     4681 tcaggtaaaa ctccgcagcc tgattcgctt tctcgaagag ggtgataaag ccaaaatcac
     4741 gctgcgtttc cgcggtcgtg agatggcgca ccagcaaatc ggtatggaag tgcttaatcg
     4801 cgtgaaagac gatttgcaag aactggcagt ggtcgaatcc ttcccaacga agatcgaagg
     4861 ccgccagatg atcatggtgc tcgctcctaa gaagaaacag taaggccttc aagtagcact
     4921 gtctgtggag ccttcgggct tcacaggctt tgttcgcctt tgtttcgttt attaacaatg
     4981 cgaagtggaa gttattaaaa tgccaaaaat taagaccgta cgcggtgctg ctaagcgctt
     5041 caaaaaaacc ggtaaaggtg gttttaagca caagcacgct aacctgcgtc acattctgac
     5101 caaaaaagcg accaaacgta aacgtcacct gcgtccgaaa gccatggttt ccaaaggcga
     5161 tctgggcctg gtaatcgcgt gcctgccgta cgcataagcc gttaacgttt ttaacttttt
     5221 aattagaata tagatacagg agagcacata tggctcgcgt aaaacgtggt gttattgcac
     5281 gcgcacgtca caagaaaatt ttgaaacaag ctaaaggcta ctacggtgcg cgttctcgcg
     5341 tataccgcgt tgccttccag gctgttatca aagctggtca gtatgcttac cgtgaccgtc
     5401 gtcaacgtaa gcgtcagttc cgtcaactgt ggattgcacg tatcaacgca gcagcacgtc
     5461 agaacggtat ttcttacagc aaattcatca atggcctgaa aaaagcctct gttgaaatcg
     5521 accgtaagat cctggctgat atcgcagtat tcgacaaagt agcgttcacc gctctggttg
     5581 aaaaagcgaa agcagctctg gcataagcca gttgaaagag ggagcttgtc tccctctttt
     5641 cgtttcaacg ccatcaaaac attgactttt atcgccgtag ccttttcaat aaaggtcttt
     5701 tgaagagtac caaaaggtaa cgcaagcaat gaatgctgct attttccgct tcttttttta
     5761 ctttagcacc tgaatccagg aggctagcgc gtgagaagag aaacggaaaa cagcgcctga
     5821 aagcctccca gtggaggctt tttttgtatg cgcgttttga aaaataaaaa gccagtctat
     5881 caggcgtaat tgtcgcagcc agtctggata cggccagcgc ggagaaaccg gagcgtattt
     5941 aagtacgtga gaatttcgag cactgcccgg gaccaaaatg gcaagtaaaa tagcctgatg
     6001 ggataggctc taagtccaac gaaccagtgt caccactgac acaatgagga aaaccatgtc
     6061 acatctcgca gaactggttg ccagtgcgaa ggcggccatt agccaggcgt cagatgttgc
     6121 cgcgttagat aatgtgcgcg tcgaatattt gggtaaaaaa gggcacttaa cccttcagat
     6181 gacgaccctg cgtgagctgc cgccagaaga gcgtccggca gctggtgcgg ttatcaacga
     6241 agcgaaagag caggttcagc aggcgctgaa tgcgcgtaaa gcggaactgg aaagcgcagc
     6301 gctgaatgcg cgtctggcgg cggaaacgat tgatgtctcc ctgccaggtc gtcgcattga
     6361 aaacggcggt ctgcatccgg ttacccgtac catcgaccgt atcgaaagtt tcttcggtga
     6421 gcttggcttt accgtggcaa ccgggccgga aatcgaagac gattatcata acttcgatgc
     6481 tctgaacatt cctggtcacc acccggcgcg cgctgaccac gacactttct ggtttgacac
     6541 tacccgcctg ctgcgtaccc agacctctgg cgtacagatc cgcaccatga aagcccagca
     6601 gccaccgatt cgtatcatcg cgcctggccg cgtttatcgt aacgactacg accagactca
     6661 cacgccgatg ttccatcaga tggaaggtct gattgttgat accaacatca gctttaccaa
     6721 cctgaaaggc actctgcacg atttcctgcg taacttcttt gaggaagatt tgcagattcg
     6781 cttccgtcct tcctacttcc cgttcaccga gccttctgca gaagttgacg tcatgggtaa
     6841 aaacggtaaa tggctggaag tgctgggttg cgggatggtg catccgaacg tgctgcgtaa
     6901 cgttggcatc gacccggaag tttactctgg tttcgccttc gggatgggga tggagcgtct
     6961 gactatgttg cgttacggcg tcaccgacct gcgttcattc ttcgaaaacg atctgcgttt
     7021 cctcaaacag tttaaataag gcaggaatag attatgaaat tcagtgaact gtggttacgc
     7081 gaatgggtga acccggcgat tgatagcgat gcgctggcga atcaaatcac tatggcgggc
     7141 ctggaagttg acggtgtaga accggttgcc ggtagcttcc acggcgtggt cgttggtgaa
     7201 gtggttgagt gtgcgcagca tccgaacgct gacaaactgc gtgtgacaaa agtgaatgtc
     7261 ggcggcgatc gcctgctgga catcgtctgt ggtgcgccaa actgccgtca gggcctgcgt
     7321 gtggcggtag ctaccattgg tgctgttctg ccgggtgatt tcaaaattaa agcggcgaaa
     7381 ctgcgtggcg aaccgtctga agggatgctg tgctccttct ctgaactggg aatttctgac
     7441 gatcacagcg gcattatcga actgcctgca gatgcgccga ttggcactga catccgcgaa
     7501 tacctgaaac tcgatgacaa caccatcgaa atcagcgtaa cgccaaaccg tgccgactgc
     7561 ttaggtatca ttggtgttgc gcgtgacgtt gccgtgctga atcagctgcc gctggttgaa
     7621 ccggaaatcg ttccggttgg tgcgaccatc gacgacacgt tgccgattac agtcgaagcg
     7681 cctgaagcct gcccgcgcta tcttggccgt gtggtaaaag gcattaacgt taaagcgcca
     7741 actccgctgt ggatgaaaga aaaactgcgt cgttgcggga tccgttctat cgatgcagtt
     7801 gttgacgtca ccaactatgt actgctcgaa ctgggccagc cgatgcacgc tttcgataaa
     7861 gatcgcattg aaggcggcat tgtggtgcgg atggcaaaag agggcgaaac gctggtgctg
     7921 cttgatggca ctgaagcgaa gctgaatgct gacactctgg tcatcgccga ccacaacaag
     7981 gcgctggcga tgggcggcat ctttggtggc gaacactctg gcgtgaatga cgaaacgcaa
     8041 aacgtcttgc tggaatgcgc tttcttcagc ccgctgtcta tcaccggtcg tgctcgtcgt
     8101 catggcctgc atactgatgc gtctcaccgt tatgagcgtg gcgttgatcc ggcactgcag
     8161 cacaaagcga tggaacgtgc gacccgtctg ctgatcgaca tctgcggtgg tgaggctggt
     8221 ccggtaattg atatcaccaa cgaagcaacg ctgccgaagc gtgcaaccat cactttacgt
     8281 cgtagcaaac tggattgcct gatcggccat catattgctg atgaacaggt aactgacatt
     8341 ctgcgtcgtc tcggctgcga agtgaccgaa ggcaaagacg agtggcaggc agttgcgccg
     8401 agctggcgtt tcgatatgga gattgaagaa gatctggtcg aagaagtcgc gcgtgtttac
     8461 ggctacaaca acatcccgga tgagccggta caggcaagcc tgattatggg tactcaccgt
     8521 gaagctgacc tgtcgctcaa gcgcgtgaaa acgctgctca acgacaaagg ctatcaggaa
     8581 gtgatcacct acagcttcgt tgatccgaaa gtgcagcaga tgatccatcc aggcgttgaa
     8641 gccttactgc tgccaagccc gatctctgtt gaaatgtcag caatgcgtct ttctctgtgg
     8701 accggcctgc tggcaaccgt ggtgtacaac cagaaccgtc agcagaaccg tgtgcgcatt
     8761 ttcgaaagcg gtctgcgttt cgtaccagat actcaggcac cgttgggcat tcgtcaggat
     8821 ctgatgttag ccggtgtgat ttgcggtaac cgttacgaag agcactggaa cctggcaaaa
     8881 gagaccgttg atttctatga tttgaaaggc gatcttgaat ccgttctcga cctgaccggt
     8941 aaactgaatg aggttgagtt ccgtgcagaa gcgaatccgg cactgcatcc ggggcaatcc
     9001 gcagcgattt atctgaaagg ggaacgtatt ggttttgttg gagttgttca tcctgaactg
     9061 gaacgtaaac tggatcttaa cggtcgcact ctggtgttcg aactggagtg gaacaagctc
     9121 gcagaccgcg tggtgcctca ggcgcgcgag atttctcgct tcccggcgaa ccgtcgtgac
     9181 atcgcggtgg tggtcgcaga aaacgttccc gcagcggata ttttatccga atgtaagaaa
     9241 gttggcgtaa atcaggtagt tggcgtaaac ttatttgacg tgtaccgcgg taagggtgtt
     9301 gcggaggggt ataagagcct cgccataagc ctgatcctgc aagataccag ccgtacactc
     9361 gaagaagagg agattgccgc taccgtcgcc aaatgtgtag aggcattaaa agagcgattc
     9421 caggcatcat tgagggattg aacctatggc gcttacaaaa gctgaaatgt cagaatatct
     9481 gtttgataag cttgggctta gcaagcggga tgccaaagaa ctggttgaac tgtttttcga
     9541 agagatccgt cgcgctctgg aaaacggcga acaggtgaaa ctctctggtt ttggtaactt
     9601 cgatctgcgt gataagaatc aacgcccggg acgtaacccg aaaacgggcg aggatattcc
     9661 cattacagca cggcgcgtgg tgaccttcag acccgggcag aagttaaaaa gccgggtcga
     9721 aaacgcttcg cccaaagacg agtaatctga tctaactaaa aaggccgctc tgcggccttt
     9781 tttctttcaa taactaattg atttataatg ttttatatct cttcgttcca cgatgcgtcc
     9841 acatttagtg gggggagggg agtaagcccg ctacattgtg ggctttgtct tatagtctga
     9901 tcactgtttc aagtcggtga ggacaccaaa aagaaccccc gcagttttta cgctgcgggt
     9961 ttgttgttca tgtctgtgag atagggtgcc ttatcgacct taccctggca accgattgac
    10021 gggggattgc tcccccgtcg cggtttcctt actgcttaca ctgtaagaac gccgcaaact
    10081 ccgctcccca gaagctcatc cgtatttcgc acagcgaacc gtgcagcatc cagatgatga
    10141 ggattgccgt cacgcagaac gtgatggccg taagcgattt ttgcgacata gcgcttgctc
    10201 ctttttcggg gaggcgctaa cctatcactt gcttagggta gacggttagg gcctcggtta
    10261 aacaaaaatg ttttccgggg cctttccaca tctggccttc aggtattccc tccgaccatc
    10321 agccgaaagg cacccgcgcg taatctatcg cttttttgtt actccggcaa ttctgctcgt
    10381 taattctgag gtaagggcaa actcatctga ttgtttcctc tgtgtgaagt tggcagttca
    10441 tgcca
//
LOCUS       DADMIB010000151        10370 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.152, whole genome shotgun sequence.
ACCESSION   DADMIB010000151 DADMIB010000000
VERSION     DADMIB010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10370
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.152"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(37..1032)
                     /gene="gapA"
                     /locus_tag="JNZ89_003473"
     CDS             complement(37..1032)
                     /gene="gapA"
                     /locus_tag="JNZ89_003473"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HAY8937225.1"
                     /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM
                     LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT
                     DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK
                     VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
                     DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
     gene            1374..1787
                     /gene="msrB"
                     /locus_tag="JNZ89_003474"
     CDS             1374..1787
                     /gene="msrB"
                     /locus_tag="JNZ89_003474"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HAY8937226.1"
                     /translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY
                     HCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL
                     GHVFPDGPQPTGERYCVNSASLRFTDGENGGEING"
     gene            1829..2101
                     /locus_tag="JNZ89_003475"
     CDS             1829..2101
                     /locus_tag="JNZ89_003475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707337.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaC family protein"
                     /protein_id="HAY8937227.1"
                     /translation="MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL
                     VMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK"
     gene            complement(2262..2903)
                     /gene="pncA"
                     /locus_tag="JNZ89_003476"
     CDS             complement(2262..2903)
                     /gene="pncA"
                     /locus_tag="JNZ89_003476"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310502.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HAY8937228.1"
                     /translation="MPHRALLLVDLQNDFCAGGALAVPEGDSTVEVANRLIDWCQSRG
                     EAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQ
                     KAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFT
                     VLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG"
     gene            complement(2914..3930)
                     /gene="ansA"
                     /locus_tag="JNZ89_003477"
     CDS             complement(2914..3930)
                     /gene="ansA"
                     /locus_tag="JNZ89_003477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HAY8937229.1"
                     /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
                     EMPDFTIHEYTPLMDSSDMTPDDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS
                     FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR
                     TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIY
                     PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG
                     KVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL
                     TPDD"
     gene            complement(4097..5953)
                     /gene="sppA"
                     /locus_tag="JNZ89_003478"
     CDS             complement(4097..5953)
                     /gene="sppA"
                     /locus_tag="JNZ89_003478"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707347.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HAY8937230.1"
                     /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
                     VSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN
                     TIRQAKDDHNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY
                     YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD
                     DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPSAQGLLEGLTKTGGDTAKYA
                     LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN
                     GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
                     RAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
                     HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ
                     GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG
                     SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANVR"
     gene            6114..6665
                     /locus_tag="JNZ89_003479"
     CDS             6114..6665
                     /locus_tag="JNZ89_003479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H nitroreductase"
                     /protein_id="HAY8937231.1"
                     /translation="MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQP
                     WHFFVIEGEGRERFSAILEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKV
                     PRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
                     GTPQLKASTSINVPDPTPFVTYF"
     gene            6782..7825
                     /gene="selD"
                     /locus_tag="JNZ89_003480"
     CDS             6782..7825
                     /gene="selD"
                     /locus_tag="JNZ89_003480"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HAY8937232.1"
                     /translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
                     GNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
                     IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
                     RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN
                     IEGVKAMTDVTGFGLLGHLSEMCQGAGVQACVDYDAIPKLPGVEEYIKLGAVPGGTER
                     NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGEL
                     VPARGGRAMVEIR"
     gene            7830..9791
                     /locus_tag="JNZ89_003481"
     CDS             7830..9791
                     /locus_tag="JNZ89_003481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HAY8937233.1"
                     /translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
                     LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG
                     DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV
                     SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
                     KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV
                     TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
                     YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSA
                     INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL
                     GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
                     DKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT
                     RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG
                     SADKKKAAPRKRSAKKSPPADEVGSGAIA"
     gene            9918..>10370
                     /locus_tag="JNZ89_003482"
     CDS             9918..>10370
                     /locus_tag="JNZ89_003482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937234.1"
                     /translation="MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGF
                     YLTCVVAVMFVFAAITSNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQ
                     AKGIEPLSIEKLQALQLITPYRFYHKQWSETLEFWPRKPEPGKDTFQYH"
BASE COUNT         2611 a         2533 c         2736 g         2490 t
ORIGIN      
        1 gaagtcgctc tttttagatc acagtttcat ctcaacttat ttggagatgt gagcgatcag
       61 gtccagaact ttgttggagt aaccggtttc gttgtcgtac caggatacca gtttcacgaa
      121 gttgtcgttc agagcgatac cagctttagc atcgaacacg gaagtgcaaa cttcgccgtt
      181 gaaatcggta gatactacgt catcttcggt gtagcccaga acgcctttca tttcgccttc
      241 agcagcggct ttaacggcag ctttgatctg ctcgtaagtt gcagcttttt ccagacgaac
      301 ggtcaggtca actacggata cgttcggggt cggaacgcgg aacgccatac cagtcagttt
      361 gccattcagt tctggcagta ctttacctac agctttagca gcaccggtag aggacgggat
      421 gatgttctgg gaagcgccgc ggccgccgcg ccagtctttg tgagacgggc catcaacggt
      481 tttctgagta gcggtagtag cgtgaacggt ggtcatcaga ccttcgatga tgccgaagtt
      541 atcgttgata actttagcca gcggagccag gcagttggtg gtgcaggaag cgttggaaac
      601 gatgtcctgg ccagcatatt tgtcgaagtt agcgccttta acgaacatcg gagtgttgtc
      661 tttagacgga ccagtcataa ccactttctt cgcaccagcg gtgatgtgtt tacgagcagt
      721 ttcgtcagtc aggaacagac cagttgcttc agcgacaacg tcaacaccaa cttcgtccca
      781 tttcaggtta gccggatcac gttcagcggt aacacggatt tttttaccgt taacgatcag
      841 atgaccgtct ttcacttcaa cggtaccgtc gaaacggccg tgagtggagt catatttcag
      901 catgtatgcc atgtaatcag cgtctaacag gtcgttgatt gcaacgatct cgatgtcaga
      961 acgtttctga gcagcacgga aaacaatgcg accgatacgg ccaaaaccgt tgatacctac
     1021 tttgatagtc atatattcca ccagctattt gttagtgaat aaaaggttgc ctgtaaaatt
     1081 acaaaaacct tacgcagcgt caagcggaat cgtgtcaatc attgcgacaa atcaatcctg
     1141 tgcctaagca ttacgcgact gactcgcctc actcttcctt tgggcttgaa accacatggg
     1201 gtcggcgccc cgaattttaa agggcaatta cgataaaaat gtgattttca tcacgattta
     1261 ggtgcagcca tttcgtcgag atcaagttta ggacaaaatt ttgccagttg gtgttaatgt
     1321 tttgttagaa tcagtcacgt aatgtgagca cgattaaagt gagatgtgag caaatggcta
     1381 ataaaccttc ggcagaagaa ctgaaaaaaa atttgtccga gatgcagttt tacgtgacgc
     1441 agaatcatgg gacagagccg ccatttacgg ggcgtttact gcataacaag cgtgacggcg
     1501 tatatcactg tttgatctgc gatgccccgc tgtttcattc cgaaaccaag tatgattccg
     1561 gctgtggctg gcccagtttc tacgaaccgg tgagtgaaga atccattcgt tatatcaaag
     1621 acttgtcaca tggaatgcag cgcatagaaa ttcgttgcgg taactgtgat gcccatctgg
     1681 ggcatgtctt tcccgacggg ccgcaaccaa caggcgaacg ttattgtgtt aactctgctt
     1741 ctttacgctt cactgatggc gaaaacggcg gagaaatcaa cggttgaaaa aacgattcag
     1801 caacttattc cacaggagcg gaaaaattat gaatcttgat gacattatca acagcatgac
     1861 gcctgaggta taccagcgtt tgtcgaccgc cgttgaactg gggaaatggc ctgatggcgt
     1921 tgcgttgacc gaggaacaaa aagagaattg cctgcaactg gtgatgctgt ggcaagcccg
     1981 ccataatacc gaagcacagc atatgacaat tgacacaaat ggtcagatgg tcatgaagag
     2041 caaacagcag ttaaaagaag attttggtat ctcagcaaag cctattgcta tgtttaagtg
     2101 aatgagttat ctagtattta agcctgttat taagggaggg caaatatact tgttcggacg
     2161 tcgtgtttta gctgcaagta ggttaaatgc aacactgaca agtattatct ggcctacaat
     2221 gtcattgagg aaatgtaggc cagagatgaa ttcaactaat attacccctg tgtctcttcc
     2281 cagtctgcca gcgtatatag cgttgcccca gctgctgaca tctccataaa cgcgtgtgca
     2341 ctgtcctggg gctggatatt cacgccacga caaccatcgg taatcacgtt caccttataa
     2401 cctaactgta acgcgtccag cacggtaaac ttcacgcaat agtcagtagc caggcccata
     2461 acgatcaatt catcgatttc atgatcgcgt aaccagtcat cgagagaggt tttctgccga
     2521 cggccgttat caaaaaaggc actgtaactg tcaactaaag gattttcgcc tttatggaac
     2581 accgctgcga tcgctttttg gttcagtaac ggatgtaatt gtgcgccttc actgttctgc
     2641 acacagtgat ctggccagaa ggtttgtggc aaaccgtcga gttggcctgg cgtataaggc
     2701 tctacaccgt gctgactggc aaaactgccg tgattcgccg gatgccagtc ctggctggcg
     2761 ataaccgctt ctccgcgcga ctggcaccag tcaataaggc ggttagcaac ctccaccgta
     2821 ctgtcacctt ccggtacggc gagcgcgcca ccagcacaga aatcattttg taaatcgacc
     2881 agtaacaggg cgcgatgggg cattgcagtc tccttaatca tccggcgtca gttcgccgcg
     2941 caggttttgg ctcatggcct tgcgaatggt ttcagtatcc agttcctggc tcagcaggta
     3001 atgcagtttg gttagcgtgg cttctacagt catatctgca ccgccaataa cgccggcatg
     3061 ggcgagggcg ttaccggtgg cataaccacc catattcact ttaccggaca tacattgtgt
     3121 caggttgacc accacaatac cgcgatcgct ggcttcttgt aattcctgca ggaaggcttt
     3181 gttttgtggc gcattaccca cgccatagga gcgcagaatc aatgctttca ctggttggcg
     3241 cagaaaattg cgcacgacat cagcagaaat ccccggataa atcgtcacta cgccaattgg
     3301 ttgtggcgtg attggatgaa cgattaattc cccttcaccg tgcggggcgg gtggcgtatt
     3361 caaacgacga atatggatac cagcttccag taacggagga aggtttggag aggcaaacgc
     3421 atcaaaacca tcggcatggg ctttggtagt gcggttgccg cgatacaatc ggttattgaa
     3481 aaagagcgtt acttcgttga tcggataatt cgccgcaacg tacaacgcat tcagcagatt
     3541 aatttgtccg tcagagcgta actcagccag cgggatttgt gaccctgtca caatgaccgg
     3601 tttaccgaga ttctcgagca tgaacgacag cgcagaggcg gtatacgcca tcgtgtcggt
     3661 accgtgtaga atgacaaaac catcatagtc gtcatagtgc gctttaatat cttcagcaat
     3721 atgctgccag tcatccggcg tcatatcaga agaatccatc aacggcgtat attcatgaat
     3781 ggtgaaatct ggcatctccg ggcgatggaa ttccggcatc agcgccagtt ggcgttgtag
     3841 atgacctgac accggaatat aaccctgctc ggaacgctgc atcccgatgg tcccgcccgt
     3901 gtaggcgacg taaattgatt tcttttgcat gatattgata tgaatgatat cgaaagagca
     3961 aaagtatata cgtgaggcag gaggagcgca cctgatacta tgcggataag gaaatatggg
     4021 gcgagacagc gggaagagga ttcgtcgagg taaaaaataa tgtggccgac gatctgtcgg
     4081 ccactcagta caagacttaa cgcacgttgg cgcaggtcag gcaaaacgca taacggtttt
     4141 gtgggtcgtt aaacgcggcc agcttgtcgc tttcactttt aacggtagag gctaccgagg
     4201 caagcggtgc aggtaacatg gcctggaacg catctggcaa cattgcccgg acagaaccag
     4261 acatgttgtc catcactttg tcgaagaagg tcggttcatc aacgtagtat tccagatgcc
     4321 actgtttcac ttttgcgagc tctgctgctt tggcaaccgc atcatcgaaa tccccgagac
     4381 tatcgaccag cccgttagct tttgcatcct gaccggtcca gacgtggccc tgggcgattt
     4441 tatcaatttg ctccggcgtc gaatgacgcg catcagcaac cagcgtgata aagcgtttat
     4501 agccattctc aatgcttaat tgcatcatct gctgcgcttc cggcggcagt gccctggtga
     4561 tagaaacatc cgccagcggt gaagttgaga caccatcagt atgaacacca atcgaatcca
     4621 gactattttc tacggtggtg atcacgccga agataccgat agaaccggtc agggtgctgg
     4681 ggttagccac aatgtaatta gctggcgtgg aaatccagta accaccagat gccgccatgc
     4741 cgcccatcga tacaaccaca ggcttacccg ctgcccgggc tgctgccagt tcagcgcgaa
     4801 tcacttcaga cgcggtaacg ctgccgcctg ggctattaac acgcaggaca atcgctttca
     4861 ctttcgggtc aaggcgagcg tcgcggattt gtgccgcagt ggtatcaccg ccaacattcc
     4921 cctgagtttc ctcgccatcc ataattgcgc cattagcgaa gacgacaccg atgctgtcac
     4981 cggtatctgc cggcgttttc aatgcgtaat cgtaataact gatggcgcga taatttttat
     5041 cagtcttact ccagccgaac tctttggtca gagctttttc gatttcggca ctcgatgcca
     5101 gtgcatcgac cagcttgttt tccagtgcat atttcgcggt atcgccaccg gttttggtta
     5161 aaccctcaag caacccttgc gcgctaggga atacctgctg agcagggatc tgtcggttag
     5221 cggcaacagt attcagatag ttttgccaca gctcaccaat ccagcggctg tcagcttcgc
     5281 gggctgccgg tgacatatca tcacgaataa acggttcaac ggcagattta tacgtaccca
     5341 cgcggaacac atgggtggaa actttcagct tatccagcaa cgatttgtag tacagaccgt
     5401 tggtagcaaa accgtgcaga tcaaccacgc cttgcggtga cagccaaatt ttattggcga
     5461 aactggcgag ataatattgc ccctggctgt agttctcgcc aacggcataa accggtttcc
     5521 cgctgtcacg aaactctttc agggctttgc cgatgtactg catagacggc tggtcgccgc
     5581 ctgcgaagtt tttcagatcc atcacgatac cggtgatatt gtggtcgtcc ttcgcctggc
     5641 gaatggtgtt gacgatatca aacagtgagt tttcctgcag acgatcggaa ctggcaccaa
     5701 gcagctggcg gcttaattta ctaaaccgct gagaactgtc gggtttatcg acgatcacac
     5761 cggaaatgtc cagcagcagt gcgccacgac tggccgtttc tttcgaatca ccaccactga
     5821 cctgcatcca gatccccaca ccaaccagta cgaggaaaat aaagaacagg ttaagtacca
     5881 tttcacggac gaaattcagc agacgccacg tccatttaaa aaatccggca ataaatcgcc
     5941 aaagggttcg catgtattct cccaacttaa ggtcacacct gtcacaggcg caatagatgt
     6001 ggttatcgta atgacccaac cgacacttgt cagcaggaat tgcggactgt gctgtaacaa
     6061 aatccactct cgtgttaatt ttgtgaataa atatcacgac aggagttaat caaatggatg
     6121 cactcgaact attgatcaat cgccgtagcg cctcccgcct ggctgaaccc gcgccaacgg
     6181 gtgaacaact gcaaaacatc ctgcgtgcgg gtatgcgtgc gccggaccat aagtccatgc
     6241 aaccgtggca tttttttgtg attgaagggg aagggcgcga gcgtttcagc gccatactgg
     6301 aacagggggc gattgctgcc ggtagtgatg acaaagctat cgacaaagcc cgtaatgcgc
     6361 cgttccgcgc accgctcatc atcacggtgg tggcgaaatg cgaagaaaat cataaagtcc
     6421 cgcgatggga acaggaaatg tctgccggat gcgcggtcat ggcgatgcaa atggcagccg
     6481 ttgcccaggg atttggcggc atctggcgca gtggcgcatt aactgaaagt ccggtagtgc
     6541 gtgaagcatt cggttgccgt gagcaggata aaattgtcgg ttttctctac ctcggcacgc
     6601 cgcagttgaa agcatctacg tcgattaacg tcccggaccc gacgccgttt gtaacttatt
     6661 tctgataatt gtcgcgaaac tgtctggatt gtgagcaaag gcgcaggaat tcagacactc
     6721 tcacttatca cttcacggaa tgagggttac catacccgga ttgcattgac aggagatgtc
     6781 catgagcgag aactcgattc gtttgaccca atacagccac ggagctggtt gcggctgtaa
     6841 aatttcccca aaagtgttgg aaaccatcct gcacagtgag caggcgaagt ttgttgatcc
     6901 gaatttgctt gtgggtaatg agacccgcga cgatgcggcg gtgtacgatc tgggcaatgg
     6961 caccagcgtt atcagtacca ccgacttctt tatgccgatc gttgataatc ctttcgattt
     7021 tggccgcatt gcggcgacta acgccatcag cgatatcttc gcgatggggg gcaaaccgat
     7081 tatggcgatt gcgatcctcg gctggccgat taacaaactt tccccggaaa ttgcccgcga
     7141 agtaaccgaa ggtggacgct atgcatgccg tcaggcgggt attgcgctgg ctggcggtca
     7201 ctccatcgat gcgccggagc cgatttttgg tctggcggta acggggatcg taccgaccga
     7261 gcgggtgaag aaaaacagca ccgcacaagc cggatgcaaa ctgttcctga cgaaaccgct
     7321 ggggatcggc gttcttacca cggctgagaa aaaatcactg ctgaaaccag aacatcaggg
     7381 actagcgacg gaagtgatgt gccggatgaa catcgcaggc gcgtcctttg ccaacatcga
     7441 aggcgtaaaa gcgatgaccg acgttacggg ctttggtctg ctgggccatt tgagcgaaat
     7501 gtgtcagggc gcaggtgtgc aggcgtgcgt tgactatgac gcgatcccaa aattgccggg
     7561 ggttgaagag tacattaagt tgggcgcagt gcctggcggc accgaacgta actttgccag
     7621 ctacggtcat ctgatgggtg aaatgccgcg tgaagtgcgc gatttgctgt gcgatccgca
     7681 aacttctggc ggtttgctgc tggcggtcat gccggaagca gaaaatgagg tcaaagctac
     7741 agccgccgag tttggcattg aactgacggc aattggcgaa ctggtgccag cgcgcggcgg
     7801 tcgtgccatg gttgagattc gttaattcaa tgcggttgtt tattgccgaa aaaccgagtc
     7861 tggcgcgcgc cattgctgat gtcctgccca aaccgcaccg gaaaggcgat ggctttatcg
     7921 agtgcggtaa tggtcaggtg gtgacctggt gtatcggtca cctgcttgag caggcgcagc
     7981 cagacgccta cgacagccgc tatgcgcgct ggaatcttgc ggatttgccg attgtcccgg
     8041 aaaagtggca attacagccc cgaccctccg tgaccaaaca acttaacgtc atcaaacgct
     8101 tcctgcatga agccagcgaa atcgttcacg ccggggaccc ggatcgtgaa gggcaactgc
     8161 tggtggatga agtgctggac tatctgcaac tggcaccgga aaagcgccag caggtgcagc
     8221 gttgcttgat aaacgacctg aacccgcagg cggttgagcg ggcgatcgac cgtcttcggt
     8281 ccaacagtga gtttgtgcca ttgtgcgttt ctgcgctggc gcgagcgcgt gccgactggc
     8341 tgtacggcat caatatgacc cgtgcgtata ccattctcgg tcgcaatgcc ggttatcagg
     8401 gcgtactttc cgtgggacgc gtgcagacac ccgtgctcgg gctggtggtg cgccgcgatg
     8461 aagagattga aaacttcgtg gcgaaagact tctttgaagt caaagcacat atcgtgacac
     8521 ctgccgatga gcggtttacc gctatctggc aaccgagcga agcgtgtgaa ccgtaccagg
     8581 atgaagaagg gcgcttgtta catcgtccac tggcggagca tgtggttaac cgcattagtg
     8641 gtcaaccagc aattgtcacc agctataacg ataaacggga atcagaatcc gcgccgctgc
     8701 ctttttcgct ttcggcgttg cagattgaag cggcaaaacg ctttggtctg agcgcgcaga
     8761 acgtgcttga tatctgccag aagctgtacg aaacgcacaa gctaatcact tatccgcgtt
     8821 ccgattgtcg ctatttgcca gaagaacatt ttgccggacg ccacgcggtg atgaatgcca
     8881 tcagcgttca tgcaccagat ctgttgccgc aaccagtggt agatccagat atacgcaacc
     8941 gctgttggga tgacaaaaag gtcgatgcac accacgccat catcccgacc gcacggagtt
     9001 ctgcgatcaa cctgacggag aacgaagcga aggtctataa cctgattgcc cgtcagtact
     9061 tgatgcagtt ctgcccggat gcggtgttcc gcaagtgtgt tatcgaactg gacattgcca
     9121 aaggcaaatt tgtcgctaaa gcgcgttttc ttgctgaagc aggctggcgc acgctgttag
     9181 gcagcaaaga gcgcgatgaa gaaaacgacg gtacgccatt gcctgtggtg gcgaaaggcg
     9241 atgagttgct gtgtgaaaaa ggtgaagtgg tagagcggca aacccagccg ccgcgccatt
     9301 ttaccgatgc aacactgctt tcggcgatga ccgggatcgc gcgctttgtg caggacaaag
     9361 atctgaaaaa gatccttcgt gcgaccgatg gtctggggac agaagcaacc cgtgccggga
     9421 ttattgaact gctgttcaag cgtggttttc tgaccaaaaa agggcgctat atccactcta
     9481 ccgacgccgg aaaagcgtta ttccattcgc tgccagaaat ggcgacgcga ccggacatga
     9541 ccgcgcactg ggaatcggtg ctgacgcaaa tcagcgaaaa gcagtgtcgc tatcaggact
     9601 ttatgcagcc gctggtgggg acgctatatc agcttattga tcaagccaaa cgtacgccgg
     9661 tgcggcagtt tcgcggcatt gtggctccgg gcagtggtgg cagtgctgat aagaaaaagg
     9721 ctgcaccgcg taaacgtagt gcgaaaaaaa gtccgccagc agatgaagtc ggaagcgggg
     9781 cgatagcgta agcgagtgaa tctttcgtgc tattcgagtc atattctgaa atatccagcg
     9841 aatcaagaaa attcgttgga tatttttttg catggataaa attatcgcct ctaaagtatg
     9901 taataacagg gaatgtgatg aaaaaagttt tattacaaaa ccatcctggg agcgagaagt
     9961 attcttttaa tggctgggaa atatttaata gtaattttga acggatgatt aaagaaaata
    10021 aggccatgct gctttgtaag tgggggtttt atttaacatg tgttgtcgct gtaatgtttg
    10081 tgttcgcagc gataacatcc aacggtttga atgaaagagg cctgattacc gcgggatgct
    10141 cttttcttta tctattaatt atgatggggc ttattgttcg ggccggtttt aaagcaaaaa
    10201 aagaacaact gcattattat caggctaaag gtattgagcc gctcagtatc gagaagttac
    10261 aggcgctaca attgatcaca ccttatcgat tctatcataa gcaatggtct gaaacgctgg
    10321 agttctggcc gcgaaagcct gaacctggca aagatacctt ccaatatcat
//
LOCUS       DADMIB010000152        10330 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.153, whole genome shotgun sequence.
ACCESSION   DADMIB010000152 DADMIB010000000
VERSION     DADMIB010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10330
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.153"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            121..987
                     /gene="folD"
                     /locus_tag="JNZ89_003483"
     CDS             121..987
                     /gene="folD"
                     /locus_tag="JNZ89_003483"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HAY8937235.1"
                     /translation="MAAKIIDGKTIAQQVRSEVAQKVQACIAAGLRAPGLAVVLVGSN
                     PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLP
                     AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL
                     NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG
                     DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL
                     QACVEYHDPQGE"
     gene            989..1201
                     /gene="ybcJ"
                     /locus_tag="JNZ89_003484"
     CDS             989..1201
                     /gene="ybcJ"
                     /locus_tag="JNZ89_003484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308617.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein YbcJ"
                     /protein_id="HAY8937236.1"
                     /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA
                     VETRKRCKIVAGQTVSFAGHSVQVVA"
     gene            1309..1830
                     /locus_tag="JNZ89_003485"
     CDS             1309..1830
                     /locus_tag="JNZ89_003485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY8937237.1"
                     /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS
                     FKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSL
                     LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP
                     GMVLMEMLWWRRR"
     gene            complement(1866..3251)
                     /gene="cysS"
                     /locus_tag="JNZ89_003486"
     CDS             complement(1866..3251)
                     /gene="cysS"
                     /locus_tag="JNZ89_003486"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HAY8937238.1"
                     /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
                     VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDA
                     LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL
                     DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG
                     NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT
                     VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAG
                     GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG
                     LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE
                     DGPQGTTWRRK"
     gene            3425..3919
                     /gene="ppiB"
                     /locus_tag="JNZ89_003487"
     CDS             3425..3919
                     /gene="ppiB"
                     /locus_tag="JNZ89_003487"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase B"
                     /protein_id="HAY8937239.1"
                     /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
                     INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
                     VDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESV
                     TVSE"
     gene            3922..4644
                     /gene="lpxH"
                     /locus_tag="JNZ89_003488"
     CDS             3922..4644
                     /gene="lpxH"
                     /locus_tag="JNZ89_003488"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HAY8937240.1"
                     /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE
                     AWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV
                     LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANS
                     KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA
                     WHTEGSMVKVTADDVELIHFPF"
     gene            4762..5271
                     /gene="purE"
                     /locus_tag="JNZ89_003489"
     CDS             4762..5271
                     /gene="purE"
                     /locus_tag="JNZ89_003489"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HAY8937241.1"
                     /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA
                     HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
                     SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL
                     ENPDPRGAA"
     gene            5268..6335
                     /gene="purK"
                     /locus_tag="JNZ89_003490"
     CDS             5268..6335
                     /gene="purK"
                     /locus_tag="JNZ89_003490"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HAY8937242.1"
                     /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS
                     VITAEIERWPETVLTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAD
                     RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSG
                     EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG
                     YMGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV
                     NNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA
                     LIPLLPPEYASGVIWAQSKFS"
     gene            complement(6472..7363)
                     /locus_tag="JNZ89_003491"
                     /pseudo
     CDS             complement(6472..7363)
                     /locus_tag="JNZ89_003491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706399.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
     gene            complement(7360..8175)
                     /locus_tag="JNZ89_003492"
     CDS             complement(7360..8175)
                     /locus_tag="JNZ89_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HAY8937243.1"
                     /translation="MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR
                     QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP
                     SHPQPLAAAWMQRAEETGLFGPLAMAASDPLTAELRQFRHCFQAALNGVKTDWRHWLG
                     KGPGLTPSHDDTLSGMLLAAWYYGALDARAGRPFFACSDNLQLVTTAVSVSYLRYAAQ
                     GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP"
     gene            complement(8186..9445)
                     /locus_tag="JNZ89_003493"
     CDS             complement(8186..9445)
                     /locus_tag="JNZ89_003493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009029994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HAY8937244.1"
                     /translation="MFTSVAQANAAVIEQIRRARPHWLDVQPAFSLISELNEGKTLLH
                     AGPPMRWQEMTGPMKGACVGGCLFEGWAKDEAQALAMLEQGEVNFIPCHHVNAVGPMG
                     GITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLS
                     AALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRTLAPQIARLDHDKQHIAEV
                     IDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFT
                     APVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAR
                     AVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ
                     IGAGTVRAPLACFEQALEALAESMGIG"
     gene            complement(9455..10279)
                     /gene="fdrA"
                     /locus_tag="JNZ89_003494"
                     /pseudo
     CDS             complement(9455..10279)
                     /gene="fdrA"
                     /locus_tag="JNZ89_003494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314544.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
BASE COUNT         2274 a         2934 c         2772 g         2350 t
ORIGIN      
        1 aaccttcgca agaggtcgct tcacgcgata aatctgaaac gaaacctgac agcgcgcccc
       61 gcttctgaca aaataggcgc atccccttcg acctacgtaa cagatggaat cctctctctg
      121 atggcagcaa agattattga cggtaaaacg attgcgcagc aggtgcgctc tgaagttgct
      181 caaaaagttc aggcgtgtat tgcagccgga ctgcgggcac caggactggc cgttgtgctg
      241 gtgggtagta accctgcatc gcaaatttat gtcgcaagca aacgcaaggc ttgtgaagaa
      301 gtcgggttcg tctcccgctc ttatgacctc ccggaaacca ccagcgaagc ggagctgttg
      361 gagcttatcg atgcgctgaa tgccgacaac accatcgatg gcattctggt tcaactgccg
      421 ttaccggcgg gtattgataa cgtcaaagtg ctggaacgta ttcatccgga caaagacgtg
      481 gacggtttcc atccttataa cgtcggtcgt ctgtgccagc gcgcgccgcg tctgcgtccc
      541 tgcaccccgc gcggtatcgt cacgctgctt gagcgttaca acattgatac cttcggcctt
      601 aacgccgtgg tgattggcgc atcgaatatc gtcggtcgtc caatgagcat ggaactgttg
      661 ctcgcaggtt gcaccactac cgtgactcac cgtttcacta aaaatctgcg tcaccacgta
      721 gaaaatgccg atctgttgat cgttgccgtc ggcaagccgg gctttattcc tggtgactgg
      781 atcaaagaag gcgcaattgt gattgatgtc ggcatcaacc gtctggaaaa tggcaaagtt
      841 gtgggcgacg tcgtgtttga agacgcggct aaacgcgcct catacattac gcctgttccg
      901 ggcggcgttg gcccgatgac ggttgccacg ctgattgaaa acacgcttca ggcgtgcgtt
      961 gaatatcatg atccacaggg tgagtaacat ggcgacattt tctttaggta aacatccgca
     1021 cgttgagctg tgcgatttgc tgaaactgga aggctggagc gaaagcggcg cgcaggcgaa
     1081 aatcgcgatt gccgaaggcc aggtgaaagt cgacggtgcg gttgaaacgc gcaaacgctg
     1141 caaaatcgtc gccggtcaga cagtgagttt tgcaggtcac agcgtacagg ttgttgcctg
     1201 atccctttcc cggcctgtat caacaggccg gttctctttt cagacttttg ccctctacgc
     1261 cccgttcatc catgctgata gcatcgacat tttgccgaag cgaccatcat gccaaccgtt
     1321 attacgcacg ccgccgttcc cctatgcatt ggtttagggt tgggttcgaa agtcatccct
     1381 ccgcgtctgt tatttgccgg aatcatcctg gcgatgctgc ccgacgccga cgtattgtcg
     1441 tttaaatttg gcgttgctta cggcaatgtt tttggtcatc gcgggtttac ccattcgctg
     1501 gtgtttgcgt ttgttgtccc gctgttatgt gtgctgattg gacgccgatg gttcagggct
     1561 gggcttattc gctgctggct gtttttaacc gtctcgttgc tatcgcacag cttgctggat
     1621 tcggtaacca ctggcggtaa gggcgttggc tggctgtggc cgtggtcaga tgaacgcttt
     1681 ttcgctccct ggcaggtgat taaagtcgcg ccgtttgcat tgtctcgtta caccacgccg
     1741 tacgggcatc aggtgataat ttctgaattg atgtgggtgt ggttgccggg gatggtgctt
     1801 atggaaatgt tgtggtggcg caggcgataa ccggatgcga aaactcgcat ccggcaacag
     1861 cgcaattact tacgacgcca ggtggtccct tgcgggccat cttccagcac gatccccatc
     1921 tcgttaagac ggtcacgcgc cgcatctgcc gccgcccagt ctttcgcttt acgggcatcc
     1981 agacgctgtt gaattaacgc ttcaatctca gccacttcgc tgtcgtctgc ctgcgcgccg
     2041 ctttgcagga acgcttccgg ttcttgctcc agcaggccca atacagcgga aagtttacgc
     2101 aggtgagatg ccattgcatt cgccgctgcc atatcttctg ctttcagacg gtttacttca
     2161 cgcgccatat caaacagtac ggaataggct tccggggtgt tgaaatcgtc gtccatcgct
     2221 tcaataaagc gcgcttcaaa cgcttcgcca ccggcaggcg caacggtttt atctgtgccg
     2281 cgcagcgcag tgtagagacg ctccagcgcc gcacgcgtct gcttcaggtt ctcttcgctg
     2341 tagttcaact ggctgcgata gtggcccgac atcaggaagt aacgcacggt ttccgcgtcg
     2401 tagtatttca gcacatcgcg cacggtaaag aagttaccca gcgatttgga catcttctcg
     2461 cggtcaacca tcaccattcc ggagtgcatc cagtagttca catactgacc atcatgggca
     2521 caggtggact gcgcgatttc gttctcgtgg tgcgggaaca tcaggtctga accgccgccg
     2581 tggatatcaa agtggttacc cagctgcttg cagttcatgg ccgaacattc aatgtgccag
     2641 ccaggacgac ccgcgcccca cggagacggc cagctcggtt cgccctcttt cgacatcttc
     2701 cacagaacga agtccatcgg gttgcgtttg tcatcaacca cgtcaacgcg cgcgccagcc
     2761 tgcagctggt cgagatcctg acgcgacagc acgccataag tcggatcggt cgggacgtcg
     2821 aacatcacgt cgccgttgtc agccacataa gcgtgacctt tggcgatcag ttgttcagtg
     2881 agttcaataa tttctgcgat atggtgcgtc gcgcgcggct ccatatccgg gcgcagaatg
     2941 ttcaaagcat caaaatcttt gtgcatttcg gcgatcatgc gatccaccag cgccacaaag
     3001 ctttcgccat tttcattggc gcgtttgatg attttgtcgt cgatatcggt aatgttgcgc
     3061 acatacttca gcttatagcc gaggaaacgc agatagcgcg caaccacgtc aaaagcaaca
     3121 aaggtacgcc cgtgaccgat atgacagaga tcgtaaacgg tgattccaca cacgtacatg
     3181 ccgacttccc cggcgtgaat aggcttaaat tcctcttttt ggcgtgtcag agtattgaag
     3241 atttttagca tcgaagattc cgtttagaca tgtgtgggta attgagttgc gtataatacc
     3301 catatttccc gcgcgaatca gcatacattg cgtgatgatc cgatcgtgcg gttatgctat
     3361 aacaccaccc tatatatgac ccgaaccggg ttgaagcacc aatcaaacgg aacaggatgc
     3421 aaaaatggtt actttccaca ccaatcacgg cgatattgtc atcaaaactt ttgatgataa
     3481 agcacctgaa acagttaaaa acttcctgga ctactgccgc gaaggttttt acaacaacac
     3541 cattttccac cgtgttatca acggctttat gattcagggc ggcggttttg aaccgggcat
     3601 gaaacaaaaa gccaccaaag aaccgatcaa aaacgaagcc aacaacggtc tgaaaaatac
     3661 ccgtggtacg ctggcaatgg cccgtactca ggctccgcac tctgcaactg cacagttctt
     3721 catcaacgtg gttgataacg acttcctgaa cttctctggc gaaagcctgc aaggttgggg
     3781 ctactgcgtg tttgctgaag tggttgaagg catggacgtg gtagacaaaa tcaaaggtgt
     3841 tgcaaccggt cgtagcggta tgcaccagga cgtgccaaaa gaagacgtta tcattgaaag
     3901 cgtgaccgtt agcgagtaat cgtggcgaca ctctttattg cagatcttca tctctgcgtg
     3961 gaagaaccgg cgatcaccgc cggttttctg cgttttttag cgggggaagc tcgcaaggcc
     4021 gacgcgctgt atattcttgg cgatctgttt gaagcgtgga ttggcgacga cgatcccaat
     4081 ccactccatc gccagatggc ggcagcgatc aaagcggtgt ccgattccgg cgttccctgt
     4141 tatttcattc atggcaaccg tgattttctg ctcggcaaac gctttgcccg tgaaagtggc
     4201 atgacgttat tgccggaaga aaaggtgctc gaactttatg gccgccgggt gttgattatg
     4261 catggcgaca cgctgtgcac cgatgacgcg ggttatcagg cttttcgcgc caaagtccac
     4321 aaaccctggc tgcaaatgct attcctcgcc ctgccgttgt ttgtgcgcaa acgcattgcc
     4381 gcgcgaatgc gcgcgaacag caaagaagcc aacagcagta aatcgctggc gatcatggac
     4441 gttaaccaaa acgcagtggt cagtgcgatg gaaaaacatc aggtgcaatg gctgatccac
     4501 gggcataccc atcgcccggc ggtgcatgaa cttatcgcca accagcaacc tgcttttcgc
     4561 gtggtactgg gtgcctggca tacggaaggt tcgatggtga aagtcacggc ggatgacgtt
     4621 gagctgattc attttccgtt ttaaaaaaac cacaactttg ctgattttac agccacgcaa
     4681 ccgttttcct tgctctcttt ccgtgctatt ctctgtgccc tctaaagccg agagttgtgc
     4741 accacaggag ttttaagacg catgtcttcc cgcaataatc cggcgcgtgt cgccatcgtg
     4801 atggggtcca aaagcgactg ggctaccatg cagttcgccg ccgaaatctt cgaaatcctg
     4861 aatgtcccgc accacgttga agtggtttct gctcaccgca cccccgataa actgttcagc
     4921 ttcgccgaaa gcgccgaaga gaacggttat caggtgatta ttgcgggcgc aggtggcgca
     4981 gcgcacctgc caggcatgat tgccgccaaa acgctggtgc cggtgctggg cgtgccagta
     5041 cagagcgccg cactgagcgg tgtcgatagc ctctactcca tcgtacaaat gccgcgcggc
     5101 attccggtgg gtacgctggc gattggtaaa gctggcgcgg caaacgcggc attactggca
     5161 gcacaaattc tcgcgactca cgataaagag ctacaccagc gtctgaatga ctggcgcaaa
     5221 gcccagaccg acgaagtgct ggaaaatccg gacccgcgag gtgcggcatg aaacaggttt
     5281 gcgtcctcgg taacgggcag ttaggccgta tgctgcgtca ggcaggcgaa ccgttaggca
     5341 ttgctgtctg gccggtcggg ctggacgctg aaccggcggc ggtgcctttt caacaaagcg
     5401 tgattaccgc tgagatcgaa cgctggccgg aaaccgtatt aacccgcgag ctggcgcgtc
     5461 atccggcctt tgtgaaccgc gatgtgttcc cgattattgc tgaccgtctg actcagaagc
     5521 agcttttcga taagctccac ctgccgaccg cgccgtggca gttacttgcc gatcgcagcg
     5581 agtggcctgc ggtgtttgat cgtttaggtg aactggcgat tgttaagcgt cgcactggtg
     5641 gctatgacgg tcgcggtcaa tggcgtttac gcgccaatga aaccgaacag ttaccggcag
     5701 agtgttacgg cgaatgtatt gtcgagcagg gcattaactt ctctggtgaa gtgtcgctgg
     5761 ttggcgcgcg cggctttgat ggcagcaccg tgttttatcc gctgacgcat aacctgcatc
     5821 aggacggtat tttgcgcacc agcgtcgctt ttccgcaggc caacgcacag cagcaggcgc
     5881 aagccgaaga gatgctgtcg gcgattatgc aggagctggg ctatatgggc gtgatggcga
     5941 tggagtgttt tgtcaccccg caaggtctgc tgatcaacga actggctccg cgtgtgcata
     6001 acagcggtca ctggacacaa aacggtgcca gcatcagcca gtttgagctg catctgcggg
     6061 cgattaccga tctgccgtta ccgcaaccag tagtgaataa tccgtcggtg atgatcaatc
     6121 tgattggtag cgatgcgaat tatgactggc tgaaattgcc gctggtgcat ctgcactggt
     6181 acgacaaaga agtccgtccg gggcgtaaag tggggcatct gaatttgacc gacagcgaca
     6241 catcgcgtct gactgcgacg ctggaagcct taatcccgct gctgccgcca gagtatgcca
     6301 gcggcgtgat ttgggcgcag agtaagttca gttaagcagg tgctcatttg attgccggat
     6361 gcggcgtaaa cgccttatcc ggcttaccgc tccggtaccc attgtaggcc tgataagacg
     6421 cgtcaagcgt cgaatcaggc atggtgcacc gattgccgga tgctctcatc actacagcga
     6481 aatacaggtc cccgcttcgc ccgccagcgt ctcttcaatt cgcgataacg ccccaatcca
     6541 cgcgggttta ctacggcttc tgacataacc actcaccgcc gttaccttcg gccccatcga
     6601 accatcggct ttggcaaatg gcgctaactc atccggtgtg gcatggcgaa tggcacgttg
     6661 ctgcggcgtt ccccagtttt catataccgc atcagcatcg gtgaggatca ccagtccatc
     6721 ggcattaatc tgctcggcga gcaacgcagt ggcgagatct ttatcaatca ccgcttcact
     6781 ccctgcccca tcttccgtca caggcacacc gccgccgcca ctgcaaatca ccacatgccc
     6841 ctctttgagc aacaactcga tggcttcgct gtcgagaatt ttacgcggtt gcggagacgc
     6901 caccacccgg cgcaaatatt taccatcacg tttcatctgc cagccgtaag ccgcttccag
     6961 tgcctcttgt tcttctggct gataaaccgg accaataaat ttctctggct gcaaaaacgc
     7021 cggatcatca ggcgaaacct caatgcgcgt cagcaccgtc gtaacaggcg gtatctgcgg
     7081 ctgtgcgctc aagctctgcg ccagcatata gcctcatccc ctggctttcc gccaccagca
     7141 catccagcgg atacggttct acctctttcc acgccagatt ctgtaacgcc agcagcccca
     7201 cctgcggccc gttgccgtga acaatcgcca gccgataaga acgggccagg cgtgccagcg
     7261 cgggtacagc actggcgata ttgcgatatt gattttccgc cgtcagcgcc tcaccgcgct
     7321 ggagtaaggc gttgccccca agagctacaa ccagtgtttt catggttttc cttgtaataa
     7381 ttgttggcca agccagaacc ccagcagcgt atctgcccct gacgtatgcc ccagcgccag
     7441 cagcgaatca atcgcaacag cggtacgttt cgggcaactc agagcatgga caaagtgcag
     7501 gagtggcgag gcgaaatatc cttgcgcggc ataacgtaaa taactgacgc tcaccgctgt
     7561 ggtaacgagt tgaagattgt cggaacaggc aaaaaacggg cgaccggcgc gcgcatctaa
     7621 agcgccataa taccaagccg ccagcagcat tccgctcaac gtgtcatcat gacttggcgt
     7681 taatccgggg cctttaccca gccagtgccg ccagtcggtc ttaacgccat tgagcgcggc
     7741 ctgaaaacag tgacgaaact ggcgtaattc agcggtcagc ggatcgcttg ccgccatcgc
     7801 cagtggtccg aaaagtccgg tttcctccgc gcgttgcatc catgcagctg caagcggttg
     7861 aggatgcgaa ggcggcgtaa tacgcagcaa acaataacgc tgtggctgtt taaccgtgaa
     7921 acgcccgagg cgaatccctt gagccacaac ctgtggtcgt tcattgccgc ataatccacc
     7981 gcataacgca tcgaattgcg cgcggcgaag cacccatcct ccggggccga aaccactacc
     8041 ctgacgatgc agcgttaaca gttcgccgct ttccgtcatc aggttaatcg cccgccgcca
     8101 cactcccgct aaccgccagg actggcgata attcggtgcg ctactgctgg caagcagagg
     8161 atggatgatc gtcattgcgc gttcctcaac caatccccat gctttcagcc agtgcttcca
     8221 gcgcctgttc aaagcacgcc agcggtgccc gcacggtgcc tgcgccaatc tgcccgatcc
     8281 ccgcctcttt atgggcgata ccggtattga tgagtggcgt aatgccggtt tctaccacgc
     8341 gacgaatatc cagccccagg cacgcgccct gaaaatccca gcctgggatc tgcaactgca
     8401 tattgcgttc aaggtaaatt tccgccatct cttcagatac cgccctggcc gcttccatgc
     8461 cacccgcacc gacaaagcgc gttacgccag gcgctgcgat cattgccgca cctccgatac
     8521 caaaggtttc ggtaatcgcg ctatcgccca tatccgggtt cgcctgctcc tgcgagaagc
     8581 cggtgaaaaa cagaccttgc ggagtgttta caggcgcagt aaaccagcgt tcacccagcc
     8641 cgcttacccg aatcccgaac atattgccgt tgcgggtcat agccgtaacg atgctgcctg
     8701 cgcggatcat cgcgccagca tccatcgccg ccttgcagta ggccatcgcg aggttgagga
     8761 agaactgatc ggtcacgctg aggaaatcga tcacttccgc aatgtgctgt ttatcatgat
     8821 cgaggcgagc aatttgtggg gccagcgtac gcattaacag tgctgaggaa gcaatattgc
     8881 gttgatggaa ctcatcgccc atcgtaatgc cctgcgccat catcgccgtg agatcgatac
     8941 cgcgctccat gcgccccagc gccgcgctta atactggcat taacacatcg cgcatccagc
     9001 gatggcgagt caggacatct tcgccgtaag cgccaaaacg catcactttg ccgatacctt
     9061 cgttgaggtt gcagtacgcc cggttgccgt cggtcacgtt ctcgaccacc agcatcggca
     9121 tactggcaga agtaatgccg cccattggcc cgacggcatt cacatggtga caaggaatga
     9181 agttcacttc cccctgctcc agcatcgcca gtgcctgcgc ttcatctttc gcccagcctt
     9241 cgaacagaca tccgcccacg cacgcccctt tcatgggtcc ggtcatctcc tgccagcgca
     9301 ttggcggccc ggcgtgaagc agtgttttgc cctcgtttag ttcgctgata agtgaaaaag
     9361 ccggttgcac atccagccag tgtggacgag cacgacgaat ttgttcgata accgcagcat
     9421 tggcttgcgc cactgatgta aacatgggaa ccccttattg caaacgttct aataaacgag
     9481 ccagtttttt attgccgccg gcgactggcg accattggta atgcacaacc ggtttgctgg
     9541 cgctttgtag ctccagcgca aagctgcgta atccgatgtt aatcacggcg acgttttcca
     9601 gtaatgacgg tgtatgttgc tgtgtggcag gcgagagcgg ataaattaac gctgccgcca
     9661 gcaaggtggc ttccggcagc gaactcacta ccgcgatccc cgcatcttcc agcgtggcga
     9721 tttgctgcga gcggcattgc gggtcacgtt cagtgcctgt caccgtggca atggcataca
     9781 gtggttgatt atctgaacgc gcggcacagg ctttttgcta ggcgcttacc agcgaggcgg
     9841 caggatcggc agtcgcaccg aagccaatca cgacatcaag tagcaatacg cgcacttgtg
     9901 gtttagcgcc gagatcggca attaactggt tgcgtaaggc tgggtcgatc atcggatggg
     9961 gacgcccgac ggtgtagaaa tcatcgccga ggtcaataat ctggtgacca tcggcgtcga
    10021 gcatcatgcc gtgatgatgg gtatcgtcgg cttccacgcc aaggtgtcca gcaagtaatc
    10081 ccgccgcttc ggcagccagc gtaccgccgg tatacaaacc gcaaataaat ccgctgctga
    10141 caggcgctat tgcgttacat cgcgccgtga cgcgtgaaag caggcaagcc aggcgtgcgg
    10201 cctcatccag cgaggaggca aaccagacat tctcgtcgcg ggccaccgcc ggggtataac
    10261 ctaaaaacag cgccaccatc ggtttgccgg ttgctttcat ggcattaaca attttcagac
    10321 gcacagcttc
//
LOCUS       DADMIB010000153        10293 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.154, whole genome shotgun sequence.
ACCESSION   DADMIB010000153 DADMIB010000000
VERSION     DADMIB010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10293
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.154"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..401
                     /locus_tag="JNZ89_003495"
                     /pseudo
     CDS             1..401
                     /locus_tag="JNZ89_003495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611482.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
     gene            484..741
                     /locus_tag="JNZ89_003496"
     CDS             484..741
                     /locus_tag="JNZ89_003496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000177060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937245.1"
                     /translation="MTLVNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFP
                     LAKKGEGRARLPSLYASFGKLGETPTHEDIIDNNRSINWPV"
     gene            complement(1299..2066)
                     /gene="fecE"
                     /locus_tag="JNZ89_003497"
     CDS             complement(1299..2066)
                     /gene="fecE"
                     /locus_tag="JNZ89_003497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter ATP-binding
                     protein FecE"
                     /protein_id="HAY8937246.1"
                     /translation="MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTL
                     LNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSLLPQHHLTPEGITVQELVSYGRN
                     PWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVV
                     LLDEPTTYLDINHQVDLMRLMGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMA
                     QGTPEEVMTPGLLRTVFSVEAEIHPEPVSGRPMCLMR"
     gene            complement(2067..3023)
                     /gene="fecD"
                     /locus_tag="JNZ89_003498"
     CDS             complement(2067..3023)
                     /gene="fecD"
                     /locus_tag="JNZ89_003498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter permease
                     subunit FecD"
                     /protein_id="HAY8937247.1"
                     /translation="MKIALVIFITLALAGCALLSLHMGVIPVPWRALLTDWQAGREHY
                     YVLMEYRLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLL
                     MPSLPVMVLPLLAFAGGMAGLILLKMLAKTHQPMKLALTGVALSACWASLTDYLMLSR
                     PQDVNNALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRDLDLLALGDARATTLG
                     VSVPHTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTG
                     ALLLVVADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR"
     gene            complement(3020..4018)
                     /gene="fecC"
                     /locus_tag="JNZ89_003499"
     CDS             complement(3020..4018)
                     /gene="fecC"
                     /locus_tag="JNZ89_003499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-dicitrate ABC transporter permease FecC"
                     /protein_id="HAY8937248.1"
                     /translation="MTAIKHPMLLWGLPVAALIIIFWLSLFCYSAIPVSGADATRALL
                     PGHTPTLPEALVQNLRLPRSLVAVLIGASLALAGTLLQTLTHNPMASPSLLGINSGAA
                     LAMALTSALSPTPIAGYSLSFIAACGGGVSWLLVMTAGGGFRHTHDRNKLILAGIALS
                     AFCMGLTRITLLLAEDHAYGIFYWLAGGVSHARWQDVWQLLPVVVTAVPVVLLLANQL
                     NLLNLSDSTAHTLGVNLTRLRLVINMLVLLLVGACVSVAGPVAFIGLLVPHLARFWAG
                     FDQRNVLPVSMLLGATLMLLADVLARALAFPGDLPAGAVLALIGSPCFVWLVRRRG"
     gene            complement(4015..4917)
                     /gene="fecB"
                     /locus_tag="JNZ89_003500"
     CDS             complement(4015..4917)
                     /gene="fecB"
                     /locus_tag="JNZ89_003500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter
                     substrate-binding protein FecB"
                     /protein_id="HAY8937249.1"
                     /translation="MLAFIRFLFAGLLLVISHAFAAMVQDEHGTFTLEKTPQRIVVLE
                     LSFADALAAVDVSPIGIADDNDAKRILPEVRAHLKPWQSVGTRAQPSLEAIAALKPDL
                     IIADSSRHAGVYIALQQIAPVLLLKSRNETYAENLQSAAIIGEMVGKKREMQARLEQH
                     KERMAQWASQLPKGTRVAFGTSREQQFNLHTQETWTGSVLASLGLNVPAAMAGSSMPS
                     IGLEQLLAVNPAWLLVAHYREESIVKRWQQDPLWQMLTAAQKQQVASVDSNTWARMRG
                     IFAAERIAADTVKIFHHQPLTVVK"
     gene            complement(4962..7286)
                     /gene="fecA"
                     /locus_tag="JNZ89_003501"
     CDS             complement(4962..7286)
                     /gene="fecA"
                     /locus_tag="JNZ89_003501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate transport protein FecA"
                     /protein_id="HAY8937250.1"
                     /translation="MTPLRVFRKTTPLVNAIRLSLLPLAGLSFSAFAAQVNIAPGSLD
                     KALNQYAAHSGFTLSVDASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSW
                     TLEPAPAPKEDALTVVGDWLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRI
                     PGVSAPENNGTGSHDLAMNFGIRGLNPRLASRSTVLMDGIPVPFAPYGQPQLSLAPIS
                     LGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPK
                     ETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLL
                     QYYDGEADMPGGLSRADYDADRWQSTRPYDRFWGRRKLASLGYQFQPDSQHKFNIQGF
                     YTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYVNESTHE
                     MRYYTATSSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIGNWTITPGMRFEHIESYQ
                     NNAITGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVE
                     PEKARTWELGTRYDDGALTAEMGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQAR
                     YDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPGNWTF
                     NLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQMADLNLAFGVKN
                     IFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF"
     gene            complement(7373..8326)
                     /gene="fecR"
                     /locus_tag="JNZ89_003502"
     CDS             complement(7373..8326)
                     /gene="fecR"
                     /locus_tag="JNZ89_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fec operon regulator FecR"
                     /protein_id="HAY8937251.1"
                     /translation="MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQ
                     DNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSE
                     TGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTA
                     KDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNA
                     GESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVA
                     GLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISPL"
     gene            complement(8323..8844)
                     /locus_tag="JNZ89_003503"
     CDS             complement(8323..8844)
                     /locus_tag="JNZ89_003503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HAY8937252.1"
                     /translation="MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQD
                     TFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPE
                     ERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKA
                     VEHCLLFRLEYGL"
     gene            9120..9324
                     /locus_tag="JNZ89_003504"
                     /pseudo
     CDS             9120..9324
                     /locus_tag="JNZ89_003504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9318..9422
                     /locus_tag="JNZ89_003505"
                     /pseudo
     CDS             9318..9422
                     /locus_tag="JNZ89_003505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612091.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            9762..10019
                     /locus_tag="JNZ89_003506"
     CDS             9762..10019
                     /locus_tag="JNZ89_003506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm development YmgB/AriR family protein"
                     /protein_id="HAY8937253.1"
                     /translation="MHSDYYNMVFGEKLANILYEANSQFFYERNVIEEAVNALFCERE
                     IINNKNIIKKLMFFLSDVNHTKKDVVQSALNIIIDITSGDI"
BASE COUNT         2400 a         2734 c         2822 g         2337 t
ORIGIN      
        1 tcgttctcgc cggacagcag gcttaccatg aaagcactgg aaatggcatg ggaaacccgt
       61 ggtaagcccg tcggggtgat gttccaagcg atcaaggcag tcattatacg agcaggcagt
      121 tccggcagtt actgtggcga taccagatca gacagagtat gagccggcgt ggaaactgct
      181 gggataacag cccaatggag cgcttcttca ggagtctgaa gaactaatgg gtgccagcga
      241 cgggctatgt aagcttcagc gatgcagctc acgcaataac ggactatatc gttggatatt
      301 acagcgcact aagaccgcac gaatataatg gtgggttacc accaaacgaa tcagaaaacc
      361 gatactggaa aaactctaac gcggaggcca gttttagttg accacaacag actacctgaa
      421 gggagccgcg gtcgcctagc agttgcagta gcaggagatc atccagccgc agtacaggtc
      481 acgatgactc tggttaatga taccggcttt gaccccgtat tttccggctc tatcgctgaa
      541 tcatggcgtc agcagccgtg cacaccatcc tattgttgtg actgggaggc tgccaccatg
      601 cttcgcgctt tccctctggc gaaaaaggga gaaggacggg cccgtctgcc ttcactttat
      661 gccagcttcg gtaagctggg tgagacaccg actcatgaag atatcattga taacaatcga
      721 tccatcaact ggcctgtata acgtggctgc cggtgattaa gaaagctgca cctacctaag
      781 tagtagcaaa cgcacacttt ttagaaaaat cgatggtcag aaactggatt agcaattccg
      841 ttccagggtt gcttttgatt tacgttggcg tctgatcatt gatttatcct caaaagccca
      901 acctcattgg taatgaacca gctccgtgaa tgtccgctct ggcacagagc gaaatttttt
      961 gatctccccc cctgaaatct aaacttagtc atgtcacgtt tttgggtttc taaaatttta
     1021 acttcgcgtt tttcgttgcc gtaagggtta tacagaaatg tccgttaagc agagttcaaa
     1081 attgattgcc gtgatcacga ctggtttgaa agccgcgccc aagcctgtac agctctggtt
     1141 tgcgttgatt atgaacctgt cagcctaaag caagcggatg gacgatgagt attggtaatc
     1201 tttcagagtc cggaaaagtt cagccccagt ctgaacaggc ttgctggcgc cagtccagtt
     1261 tcattcagtc gtggtttggt tcttacggcc tgtgcaatct acctcattag gcacatcggc
     1321 ctgccagata ccggctcggg gtgtatttcc gcttccacgc tgaatactgt tctcagcaat
     1381 cctggggtca tcacctcttc tggtgtgcct tgcgccataa catgtccgtt tgccattacc
     1441 accagttgat cgcagtaccg gctagcctga ttaaggtcgt gcagcacagc gaccaccgtt
     1501 ttcccctgag tccggagttc gcccatcaac cgcatcaggt ccacctggtg attgatatca
     1561 agataggtgg ttggctcatc aagtaataca acgggcgtat tctgggccag gaccatcgcc
     1621 agaaatgcgc gctggcgctg accgccggaa agctcggtta accgacgaac ggcaagatga
     1681 ttgatccggg tctggttcat ggcgacatta actcgtgcat tgtcttcagc ggagagacgc
     1741 ccccagagtg acagccaggg attacgacca tacgaaacca gctcctggac tgtgatcccc
     1801 tctggcgtta aatggtgctg aggcagcagc gaaagcctgc gggccaactg gcgtgatgag
     1861 agcatattta tgggattatc gccgagaaat acggtgccag actgcggcat taaaagccgc
     1921 gaaaaacagt ttaacagcgt cgatttcccg caaccgttag ggccgatcag ggcggtgatc
     1981 ttccccgttg gcagtgagag tgaaacgtcg ttaagtacct tgtctgtccc gtaactgacc
     2041 gtcagatttt cagttcgtaa agtcatttat cgcattctca caagcaacca gacaaaccac
     2101 ggcgcaccga taatggcggt cagcacgcca accgggagct ccagtggggg atgaataatt
     2161 ctcgccagca gatcggcaac caccaacagc aacgcacctg tcagggctga aacaggcagc
     2221 agtctgcggt gacgtccacc ggtgatgcta cgcatcatat gcggcaccac gagaccaata
     2281 aagctaatcg ggccgcaggc ggccacgccg gtagatgtca tggcgacagc tagtaacaaa
     2341 gcccagaatc gggtatgggg caccgacaca ccgagcgtgg tggcgcgcgc atcgccgagt
     2401 gcaaggaggt cgagatcgcg gcaaaaactc aggctcagcg gcagaaataa aatcatcagc
     2461 gggatggcaa tcttcacaaa gctccagtca cggccccata agctgccggt cagccacagc
     2521 agggcgttgt tcacatcctg cgggcgcgag agcatcagat aatccgtcag gctggcccag
     2581 catgcagaaa gcgccacgcc ggtgagcgcc agcttcatcg gctggtgggt ctttgccagc
     2641 atcttcagta atatcaaccc cgccatgccg cccgcaaagg ccagcagcgg cagcaccatc
     2701 acgggcagtg acggcataag aagtagagcc cccacagagg ccaggctggc ggcatggtta
     2761 acgccgagaa tatccggtga tgccagaggg ttgcgcacaa tcccctgtat cagcacgccc
     2821 gccacggcga gggctgcacc gacaaacagt gccagcagca agcgcggcag tcggtactcc
     2881 atcaatacat aataatgctc gcgtccggcc tgccagtcgg tcagcagcgc gcgccacggc
     2941 acggggatca ctcccatatg gagtgataac agcgcacagc ccgccagggc aagggtgatg
     3001 aaaataacca gcgcaatttt catcctcgcc tcctcacaag ccagacaaag caagggctgc
     3061 caatcagcgc cagcactgcg cctgcgggca gatctccggg gaaggccagc gcgcgtgcga
     3121 gtacatctgc cagcagcatc agcgtggccc ccagcagcat gctcactggc agtacgttgc
     3181 gctgatcgaa gcctgcccag aagcgcgcca gatgtggcac cagcagaccg ataaacgcca
     3241 ccggacctgc cacgctgacg cacgcaccaa ccagaagcag cactaacata ttgatgacca
     3301 aacgtagcct cgtcaggttc actcccagcg tatgggcggt gctgtcgctg aggttgagca
     3361 ggttcagttg attcgccagc agtaacacga cagggactgc agtgaccacc accggcaaga
     3421 gctgccagac atcctgccag cgggcgtggg acactccgcc tgccagccag taaaagatgc
     3481 cgtaagcatg atcttcggcc agcagcaggg tgatgcgggt aaggcccata caaaaggccg
     3541 acagcgcgat acccgcgagg atcagtttgt ttctgtcatg ggtatgacga aatccgcctc
     3601 ctgcggtcat gaccagcagc cagctcacgc cgcccccgca tgccgcgatg aacgacagag
     3661 aatagcctgc aatcggcgtc ggactcagcg cgctggtaag cgccatagcc agcgccgcgc
     3721 cgctgttaat gccgagcagt gaaggagagg ccattgggtt gtgggtcagg gtttgcagca
     3781 gcgtgcccgc gagcgccagg cttgcgccga tcagaacggc gaccaggctt cgtggcaaac
     3841 gaaggttttg caccagcgct tctggtagcg ttggcgtgtg tccaggcagc agggcgcggg
     3901 ttgcatctgc tccggaaaca ggaatggccg agtagcaaaa cagactcagc cagaaaataa
     3961 taataagtgc tgcaacggga agcccccaca gcagcatcgg gtgttttatc gcggtcattt
     4021 cacaacggta agcggctgat ggtggaagat ttttaccgtg tcagcggcaa tacgctctgc
     4081 agcaaaaata ccgcgcatcc gcgcccaggt gttactgtcg accgaagcaa cctgctgctt
     4141 ctgcgcggcg gttaacatct gccagagcgg atcttgttgc cagcgtttaa caatgctctc
     4201 ttcgcgatag tgggcaacca gcagccaggc aggattgacc gccagcagtt gctccaggcc
     4261 gatggacggc atggacgaac ccgccatcgc agcgggaacg ttcagcccca gagaggccag
     4321 cacgctgccg gtccaggtct cctgagtatg caggttgaat tgctgttcgc gtgatgtgcc
     4381 aaaggccacg cgtgtccctt tgggaagctg gctggcccac tgcgccatcc tctctttatg
     4441 ttgttccaga cgtgcctgca tctctcgctt tttacccacc atttcgccga tgatagccgc
     4501 agattgcaaa ttttcagcgt aggtttcgtt gcgggactta agcagcagta ccggcgcgat
     4561 ttgctgcaag gcgatgtaaa cccccgcatg gcgactgctg tcggcaatga tcaggtctgg
     4621 tttcagagcg gcaatggctt ccaggctcgg ctgcgcgcgc gttccgacgg actgccacgg
     4681 tttcaggtgc gcacgcactt cgggcaggat gcgttttgca tcgttatcgt cggcaatacc
     4741 gatcgggctg acgtccacgg cggccagcgc atcggcgaac gagagttcca gcaccacaat
     4801 ccgttgtggc gttttttcga gtgtaaacgt gccgtgttcg tcctgaacca tggcggcaaa
     4861 ggcgtggctg atcaccagca gcaggcctgc aaaaagaaaa cggataaatg ccaacataat
     4921 cacattccag ctaaaagccc ggcaagccgg gcgttaacac atcagaactt caacgacccc
     4981 tgcatataca gcgtgcgcgg ctggcctgca tagatgcctt tgttgttgtc gtcataagag
     5041 cggatgaagt agtcctggtc gaagatgttt ttcacaccga atgccaggtt cagatctgcc
     5101 atctgcgggc caaagtcata cgccacgcgt gcaccccaga gcatgaagcc gggaatgcgg
     5161 ccggtactgc cgtcggcgct ctctttcacc gtattggcgt tatccgcaaa ctggctggac
     5221 tggaaatcgc tgttcagatt gaacgtccag tttcctggct tgtagtccac gcccagcgtg
     5281 cctttatgtt tcggggagaa tggtaccaga ttgccgtagg tgtcgccttt ctcgcggatt
     5341 tccgcgttca catacgcata gctggcgtag atggaaacgt tatcaagcgt tggcgttagc
     5401 gtacccagat cgtaacgtgc ctgcgtttcc agcccggtat ggcgcgtttt gccacgtgca
     5461 gtgacggtgt cgttggtctg gttggagtcg tactgattgt taaagttaat caggaacagc
     5521 cccatttccg ccgtcagcgc gccgtcgtcg tagcgggtac cgagttccca ggttcgcgct
     5581 ttttccggtt ccacattgcc gctttgcaca gccttgccaa tctggctgta ctgtacggtg
     5641 ccgaacgagc cttcagtgtt tgcataaaga ttccagctgt cagtcaggtg atagagcacg
     5701 ttcaacgccg gaagcggtgc gttatagctc acttcttcgt gcgtgcctgt gatggcgttg
     5761 ttctggtatg actcgatatg ttcgaaacgc atacccggcg tgatggtcca gttgccgatg
     5821 tcgattttgt catccagata ccaggcgtgc gcctcggtgc cggaacgcgt atcgcggtcg
     5881 taagggcttg agccggacgg caactgcccg ctgctggtgg cggtgtagta acgcatttca
     5941 tgcgttgatt cattcacata gcgatagccc acgcccactt cgtgcgcgga agggccgatc
     6001 ataaagatct ggctgtagcg tggctcaata ccgcgcaccc agtagttacg cggcgagagg
     6061 gtgatgcgtt tgccttgctc caggtagccg ctgcgcaggg tttgggtgta gaacccctga
     6121 atgttgaatt tatgctggct gtctggctgg aactggtagc ccaggctcgc cagcttgcga
     6181 cgaccccaga agcggtcata cgggcgggtg gattgccagc gatcggcgtc gtaatccgcg
     6241 cgagacaggc caccgggcat gtcggcttca ccgtcgtaat attgcagcag gctgttgaag
     6301 gtgtgcacct catccggcgc atatttgctt ttcagcatca ggtcgtcgat gcgggtggcg
     6361 ctgtgctcgc gccagtcact gccgcgcgtg ccggagtaga gcagcgcggt gccaaaaccg
     6421 ttgtccgctg tgccgcccac catcaggttg tgcgtctctt tcgggttgtt ttgtgaagag
     6481 gttgggctga gctgaccttc cacgcccgcc tcgataccaa agtcctgcgg aatggcacgg
     6541 gtaacaaagt tcaccacgcc gcccacgctc tgcggtccgt aacgcaccgc accaccaccg
     6601 cgtaccacgt caatggcatc catgttgccg agcgaaatgg gagccagtga aagctgcggc
     6661 tgaccgtaag gggcgaaggg gacggggatg ccgtccatca ggacggtcga gcggctggcg
     6721 aggcgcgggt tcaggccccg gatgccaaag ttcatcgcca ggtcgtggct gccggtgccg
     6781 ttgttttccg gcgcgctgac gccagggatg cggttaagta cctcacgcat ggtggttgcg
     6841 ccggttttgg cgaaatcctc acggcggatc acgtcacgcg cgccagcatg ttcaaatacg
     6901 tcgttttcac gcgcatcacc cagccagtcg ccgaccacgg tcagggcatc ttcttttggt
     6961 gcgggcgcgg gctccagcgt ccagctgtta tttcccagcg gttttacctg cagtccgctg
     7021 ccgtccagca gttgttgcag gccgctctcg acgtcgtaat cgccgtgcag gccgttgctc
     7081 tgcttgccgc gcgtcaggct ggcgtcaacc gagagggtaa atccgctgtg tgcggcatac
     7141 tgattgagcg ctttatcgag cgatcccggt gcgatattaa cctgtgcagc aaaagcggaa
     7201 aacgagagac cggccagcgg cagcaggctc aggcgaatgg cgttaaccaa aggtgttgtt
     7261 ttacgaaaaa cgcgtaacgg cgtcatacct tccccatcat catttttgtt gtgttcagct
     7321 atgagtcgaa cgagaagggt aaaaaggaca atcgaaataa gaattatttt ccttacagtg
     7381 gtgaaatgtt tatccagtac cgcgtaatag actgaatttt aacgggaagc gtttgcgcga
     7441 taacgttcag gatcgcatcg gtatttttca gcgggaacgt cccgctcagg cgcagcccgg
     7501 caacggcggg atcgcagcgc agcacgccgt tgcggtaacg ggttagcgtg gctatcacct
     7561 cacccagcgg tttatcgctg aagctcagga tgtccttcgt ccagcttgta ctctcgtcat
     7621 ccagcggttt cactgcgcca aactcagagg cgctgaactg caggctttca ccagcgttca
     7681 cgatgcgttt ttgcgcgggg gcactggcga gaagcacttc cacagcgtgc tgctgaacgt
     7741 caagctgcgt gaaattatcc tgctggcgga cggtaaattc tgtccctaaa gcagtgagct
     7801 ggccctgacg ggtcaggaca cggaaggggc gttgcagggc atctttcgcg gtagtaatgg
     7861 cgatttcacc gtaccagagc cggacggtgc gctgatgcgc atcaaaacgc acatccgccg
     7921 cgctttgggt attcagcgtg agcagggagc catcttccag ttgctgacgg ctgactgtgc
     7981 ctttggcggt gcggtaatct gcccgcagac cttcgccggt ttccgactgc cagagctgcc
     8041 agcctccgcc agcgccgagc aacagcagta atcctttcat cacgtgacgg cgggtgaggc
     8101 gggtatcgtg caacgcccgg ctggcaacgt cgccaggcac accgccaagc tggttgcgca
     8161 ggttttcaac ctgctgccag gcccactggt tatcctgatc ctgttcatac cactgttgcc
     8221 agcgcgcttc ctgttgtggg ctgacgcgct cgccgcttag cacggcatac cagtgggaag
     8281 ctgaacgcag cgcctgacgg cgggaatcgg ttaacaaagg attcataacc catactccag
     8341 acggaacagc aggcagtgct cgacggcttt cgccacgtat tttttcacgg agctgatgga
     8401 aacaccgagt ttgtgcgcaa tctcgctgta tgtcagacca tccagttgcg aaagcagaaa
     8461 cgcttcacgt gttttgccgt ttagcccgtc cagcatgctg tcgaggagtt gtagggtctc
     8521 gagttggctt tcgcgttcct caggtgaagg cgctcccccc tccggcataa gcgccagcat
     8581 ctccagatac gctttttcca gcgcgtttcg gcgaaacagg tccaccatca cgcgtttggc
     8641 gatagtgcag aggaaggagc gaggatcgcg gatcgtcgag agcgtttcgc tgaccattac
     8701 ccgcaaaaaa gtgtcctggg caatgtcatc tgcatcaaaa gcagactgga gtttgcgcgt
     8761 cagccagctt ttcaaccagc cgtgatgtgt gccataaagc gactcgaacg ttaaggaagc
     8821 tgtggtagtg gcgcggtcag acatgcggag tgcatcaaaa gttaattatc acgtagtcat
     8881 attaatatga gaatggttat cattacaatt ggaaataaaa ttgtttccaa tagacatttt
     8941 taacatgttg tttttctaag tgttataagg taggtataaa atgggatgga gcctctgctt
     9001 ctgacatgtg tcggtcagaa tgactcatga tgtggtctgc tattattgac atcctcactg
     9061 ccctaaagga tggggatttc ggtaatgatc ttacccagca atagtggaca cgcggctaag
     9121 tgagtaaact ctcagtcaga ggtgactcac aagacaaaac agtttcaacc agtaaaaaaa
     9181 cgtaaacacc attcgcatga atttcgtagt taagatctga agcttgcaga atgcatcggt
     9241 gttactgccg gagtccgtga acttagtctg catgaatcac cacagcttta catctgtcgc
     9301 agtaaacagc aaaatcagca aacttactta attatatcga gtgcgattac aatcgctggc
     9361 gatggtacag ttggtgtggc ggtctcagtc cggaacaatt tgaaaatcat aatctcactt
     9421 aaaacggcat ccattttaca aaagatggcc gtctgtgtat ttgtaatgaa taccttctac
     9481 atgtttagag tgcataatcc acgacaaggc gatatcctaa aaattagcta gcaggcaact
     9541 ttgatggcat agataatgtt tttagtaaaa aagagttgac tgaatataat acagcctctt
     9601 cctacataag aaggaatgtg ctcacaaaaa aaaaccatta gtctgcttcc tgttcttaca
     9661 ataatcagta ttatgtattt tatttatata gcaaaatatg cttgttacac ctgtcataat
     9721 taggcatggt aaaattattg actgaaccct gggggagaaa gatgcacagt gattattata
     9781 atatggtttt tggtgaaaaa ttggccaata ttttatatga agctaactct caattttttt
     9841 acgagagaaa tgtcatagaa gaggcagtca acgctttatt ctgtgagcgt gaaataataa
     9901 acaacaagaa cataataaag aagctgatgt tctttttgtc agatgttaat cacaccaaga
     9961 aagatgttgt tcagagcgca cttaatatta tcattgacat tacatcaggt gatatttgag
    10021 attttacata aaagataatc tctcaaggag tcttatctga aaacgaaata tatagtccct
    10081 ctcgttttgt aatatcgatt ggctttgttg aatcggttac gtaccccgga gccggtcata
    10141 ttttcaggta atacacacgc tttcagacat ttcggctttc gtcatttttg tatcatgggc
    10201 atagcttctg ctacctgacc atcataatca cgcagcttca gtgaagcagt gaccacctgt
    10261 ttaacccggt gtatcgttat gatcttatcc agc
//
LOCUS       DADMIB010000154        10213 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.156, whole genome shotgun sequence.
ACCESSION   DADMIB010000154 DADMIB010000000
VERSION     DADMIB010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10213
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.156"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            141..1997
                     /gene="kup"
                     /locus_tag="JNZ89_003507"
     CDS             141..1997
                     /gene="kup"
                     /locus_tag="JNZ89_003507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity potassium transporter Kup"
                     /protein_id="HAY8937254.1"
                     /translation="MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGV
                     ERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSML
                     VIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKH
                     GTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIAL
                     GAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNP
                     FFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMES
                     GQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHW
                     NKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRR
                     MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILL
                     TLRTEDAPYVHNVRRVQIEQLSLTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMME
                     TSFFMSHESKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI"
     gene            2164..2583
                     /gene="rbsD"
                     /locus_tag="JNZ89_003508"
     CDS             2164..2583
                     /gene="rbsD"
                     /locus_tag="JNZ89_003508"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709562.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HAY8937255.1"
                     /translation="MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMAL
                     TQGVPSFMQVLGVVTNEMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIR
                     YTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF"
     gene            2591..4060
                     /gene="rbsA"
                     /locus_tag="JNZ89_003509"
                     /pseudo
     CDS             2591..4060
                     /gene="rbsA"
                     /locus_tag="JNZ89_003509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418205.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
     gene            4065..5030
                     /gene="rbsC"
                     /locus_tag="JNZ89_003510"
     CDS             4065..5030
                     /gene="rbsC"
                     /locus_tag="JNZ89_003510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HAY8937256.1"
                     /translation="MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTIN
                     NLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVA
                     AALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADL
                     FGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNK
                     IKIIVYSLCGLLASLAGTIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIV
                     GTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ"
     gene            5055..5941
                     /gene="rbsB"
                     /locus_tag="JNZ89_003511"
                     /pseudo
     CDS             5055..5941
                     /gene="rbsB"
                     /locus_tag="JNZ89_003511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312720.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
     gene            6067..6996
                     /gene="rbsK"
                     /locus_tag="JNZ89_003512"
     CDS             6067..6996
                     /gene="rbsK"
                     /locus_tag="JNZ89_003512"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HAY8937257.1"
                     /translation="MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKG
                     ANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFV
                     NGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNK
                     TIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR
                     TVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIR
                     FAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR"
     gene            7000..7992
                     /gene="rbsR"
                     /locus_tag="JNZ89_003513"
     CDS             7000..7992
                     /gene="rbsR"
                     /locus_tag="JNZ89_003513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose operon transcriptional repressor RbsR"
                     /protein_id="HAY8937258.1"
                     /translation="MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELN
                     YAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQ
                     RMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDN
                     SLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTG
                     DFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDI
                     ELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA"
     gene            complement(7958..9385)
                     /locus_tag="JNZ89_003514"
     CDS             complement(7958..9385)
                     /locus_tag="JNZ89_003514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HAY8937259.1"
                     /translation="MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRS
                     PLAMQSAIISYTLTVAMFIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQL
                     VVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVT
                     RATWHWIFLINIPIGIAGLLYARKHMPNFTTAQRRFDITGFLLFGLSLVLFSSGIELF
                     GEKIVASWIALTVIVTSIGLLLLYILHARHTPNPLISLDLFKTRTFSIGIVGNIATRL
                     GTGSVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGI
                     TVIIGLMIAQFSLQSPAMAIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGN
                     SVLAVTQQLSISLGVAVSAAVLRVYEGMEGTTTVEQFHYTFITMGIITVASAAMFMLL
                     KTTDGNNLIKRQRKSKPNRVPSESE"
     gene            complement(9408..10100)
                     /locus_tag="JNZ89_003515"
     CDS             complement(9408..10100)
                     /locus_tag="JNZ89_003515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HAY8937260.1"
                     /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELG
                     EQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQ
                     VIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKKNFRRERWIEVDMAW
                     HEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAF
                     KTCQALLRSPDK"
BASE COUNT         2486 a         2458 c         2702 g         2567 t
ORIGIN      
        1 aaggggggta tttttctttg agccaggtta atgtggccgc atttaggagt acgattttgc
       61 cgttaatcgt gcatactgtg cgcttttttg tgggccaagg gactaagcac acatttcata
      121 tttcaacgaa agactagtct atgagcactg ataataagca atcattgccc gcgattaccc
      181 tcgcggcgat tggagttgtc tacggcgata ttggtaccag cccgttatat acacttcgtg
      241 aatgtttgtc cggccagttt ggttttggcg ttgaacgcga tgccgtgttt ggctttttat
      301 cgctgatctt ctggctgcta atctttgtgg tttccattaa atatctcacc ttcgtgatgc
      361 gggcagataa cgccggtgag ggggggatcc tgacgttgat gtcgcttgcc gggcgtaata
      421 cgtcggcgcg aaccacatca atgctggtga ttatggggct aatcggcggc agctttttct
      481 atggtgaagt cgtcataaca cccgctattt cggtgatgtc agccattgaa ggtctggaaa
      541 tcgtcgcccc gcagctggat acctggatag ttcccctctc aattatcgtt ctcactttat
      601 tatttatgat tcaaaaacat ggcacggcta tggtcggtaa gctgtttgcg ccgatcatgc
      661 tgacctggtt tttgattctg gcaggactgg ggttacgtag cattattgct aacccggaag
      721 tgctgcatgc gctgaatcca atgtgggcgg tgcatttctt ccttgaatac aaaacggttt
      781 cttttattgc attaggggca gtggtgttgt cgattacggg ggtcgaggcg ctgtatgctg
      841 atatggggca ctttggtaag ttccctattc gcctggcgtg gttcaccgtc gtattacctt
      901 ccttgaccct taattacttc ggtcagggag cgctgttgtt aaagaacccg gaagcgatta
      961 agaacccgtt cttcctgttg gcaccggact gggcgctgat cccgctgctg atcatcgccg
     1021 cactggcgac ggtaattgcc tcgcaggcgg ttatctctgg cgtcttctca ttgacgcgtc
     1081 aggcggtacg tctgggatat ttgtcgccga tgcgcattat tcacacctcc gaaatggagt
     1141 cagggcaaat ctatattccg tttgtgaact ggatgctcta tgtcgcggtc gtgattgtga
     1201 ttgtcagctt tgagcactcc agcaacctgg cggcggcgta cgggattgcg gtgaccggaa
     1261 ccatggtgct gacgtctatt ctctcgacta ccgtggcacg tcagaactgg cactggaata
     1321 agtattttgt tgcgctgatc ctgattgctt tcctttgtgt cgatattcca ttgttcaccg
     1381 ctaacctcga taaactgctc tccggcggtt ggttgccatt gagcctcggt acggtgatgt
     1441 ttatcgtgat gaccacctgg aagagcgagc gtttccgctt gctgcggcgg atgcatgaac
     1501 atggtaactc tctggaagcg atgattgctt cgctggagaa atcaccgcct gttcgcgtgc
     1561 ccgggaccgc ggtgtatatg tcgcgtgcaa tcaacgtcat tccctttgcg ctgatgcata
     1621 accttaaaca taacaaggta ttgcatgagc gggtgattct gttaactctg cgtaccgaag
     1681 acgcgccata tgtccataat gtccgtcggg tacagattga acaactgtcg ctcactttct
     1741 ggcgcgtggt ggcaagttat ggttggcgag aaacgccaaa cgtggaagaa gttttccacc
     1801 gctgcggtct ggaaggatta agttgccgga tgatggaaac ctccttcttt atgtcgcatg
     1861 agtcgaaacg cccgtggtat ttgcgtctgc gcggcaagct gtacttgctg ctgcaacgta
     1921 atgcgctgcg tgcaccagat caatttgaaa tcccgccaaa cagggttatc gaactgggta
     1981 ctcaggtcga aatctaacgc cagacgcctc ctttctccat aagggggcgt ttttgttttc
     2041 atggttaatc accatgtaaa acgtttcgag gttgatcaca tttccgtaac gtcacgatgg
     2101 ttttcccaac tcagtcagga ttaaactgcg ggtcagcgaa acgtttcgct gatggagaaa
     2161 aaaatgaaaa aaggcaccgt tcttaattct gatatttcat cggtgatctc ccgtctggga
     2221 cataccgata cgctggtggt gtgtgatgct ggtttaccca tccccaaaag tacaacgcgt
     2281 atcgatatgg cattaaccca gggtgtacct tcttttatgc aggtgctggg cgtcgttaca
     2341 aatgaaatgc aggtcgaggc tgccattatc gcggaagaga tcaaacaaca taatccgcaa
     2401 ctccacgaaa cgttgctcac tcaccttgag cagctgcaaa aacaccaggg aaataccatt
     2461 gaaattcgtt acaccacgca tgaacaattc aaacaacaaa ccgcagaaag tcaggcggta
     2521 attcgcagcg gagaatgttc tccgtatgcg aatatcattc tctgtgctgg cgtgacgttc
     2581 tgaggccgtc atggaagcat tacttcagct taaaggcatc gataaagcct tcccgggcgt
     2641 aaaagccctc tcgggcgctg cgttaaatgt ctatccgggc cgcgtgatgg cgctggtggg
     2701 cgaaaacggc gcgggtaaat ccaccatgat gaaagtgctt actggtatct atgctcgcga
     2761 tgccggcacg cttttatggc tggggaaaga aacgacattt accgggccga aatcttccca
     2821 ggaagccggg attgggatta tccatcagga actgaacctg atcccgcagt tgaccattgc
     2881 cgaaaacatt ttcctcggtc gtgagtttgt taatcgcttt ggcaaaattg actggaaaac
     2941 catgtatgcc gaagcggata aattgctggc taaacttaac ctgcgcttta aaagcgacaa
     3001 gctggtgggc gatctttcca tcggtgacca gcaaatggtt gaaatcgcca aagtgctgag
     3061 ctttgagtcg aaagtcatca ttatggatga accgaccgat gcgctgaccg ataccgaaac
     3121 cgaatccctg ttccgcgtca tccgcgaact aaaatcgcaa ggccgcggta ttgtctatat
     3181 ctcccaccgc atgaaagaaa tcttcgagat ttgcgatgcc gttaccgttt ttcgtgacgg
     3241 gcaatttatt gctgagcgcg aagtggcatc actgaccgaa gattcgctga ttgagatgat
     3301 ggtgggtcgc aagctggaag atcaatatcc acacctggac aaagcgccgg gagatatccg
     3361 cctgaaagtc gataatctct gcggacctgg cgttaacgat gtctctttta ctttacgcaa
     3421 aggcgaaatt cttggcgtct ctggtttgat gggcgcaggt cgtaccgaac tgatgaaagt
     3481 gctctacggc gcactaccgc gcaccagcgg ttacgtcacc ctggatgggc atgaagtcgt
     3541 tacccgttca ccgcaggatg gcctggcaaa cggcattgtg tatatctccg aagaccgtaa
     3601 acgtgacggt ttagtgttgg gcatgtcagt aaaagagaac atgtcgctga cagcgctgcg
     3661 ctacttcagc cgcgctggcg gcagtttgaa gcatgccgat gaacagtagg ctgtgagtga
     3721 tttcattcgt ctgtttaatg tgaaaacacc gtcgatggaa caggcaattg gtctgctttc
     3781 cggtggcaat cagcaaaaag tgttgatcct tgatgaacct acccgtggcg tagatgtcgg
     3841 cgcgaaaaaa gagatctatc aactgattaa ccagttcaaa gccgatggct tgagcatcat
     3901 tctggtgtca tcggagatgc cagaagtatt aggcatgagc gatcgcatca tcgtcatgca
     3961 tgaagggcat ctcagcgggg aatttactcg tgagcaggcc acccaggaag tgttaatggc
     4021 tgccgctgtg ggcaagctta atcgcgtgaa tcaggagtaa aaaaatgaca acccagactg
     4081 tctctggtcg ccgttatttc acgaaagcgt ggctgatgga gcagaaatcg cttatcgctc
     4141 tgctggtgct gatcgcgatt gtctcgacgt taagcccgaa ctttttcacc atcaataact
     4201 tattcaatat tctccagcaa acctcggtga acgccattat ggcggtcggg atgacgctgg
     4261 tgatcctgac ttcgggcatc gacttgtctg taggttctct gttggcgcta accggcgcag
     4321 ttgctgcatc tatcgtcggc attgaagtca atgcgctggt ggctgtcgct gctgctctcg
     4381 cgttaggtgc cgcaattggt gcggtaaccg gggtgattgt agcgaaaggt cgcgttcagg
     4441 cgtttatcgc tacgctggtt atgatgcttt tactgcgcgg cgtgaccatg gtttatacca
     4501 acggtagccc agtgaatacc ggctttactg agaacgccga tctgtttggc tggtttggta
     4561 ttggtcgtcc gctgggcgta ccgacgccag tctggatcat ggggattgtc ttcctcgcgg
     4621 cctggtacat gctgcatcac acgcgtctgg ggcgttacat ctacgcgctg ggcggcaacg
     4681 aagcggcaac gcgtctttct ggtatcaacg tcaataaaat caaaatcatc gtctattctc
     4741 tttgtggtct gctggcatcg ctggccggga ccattgaagt ggcgcgtctc tcctccgcac
     4801 aacccacggc ggggactggc tatgagctgg atgctattgc tgcggtggtt ctgggcggta
     4861 cgagtctggc gggcggaaaa ggtcgcattg ttgggacgtt gatcggcgca ttaattcttg
     4921 gcttccttaa taatggattg aatttgttag gtgtttcctc ctattaccag atgatcgtca
     4981 aagcggtggt gattttgctg gcggtgctgg tagacaacaa aaagcagtaa taacgactac
     5041 aggacatctt gaatatgaac atgaaaaaac tggctaccct ggtttccgct gttgcgctaa
     5101 gcgccaccgt cagtgcgaat gcgatggcaa aagacaccat cgcgctggtg gtctccacgc
     5161 ttaacaaccc gttctttgta tcgctgaaag atggcgcgca gaaagaggcg gataagcttg
     5221 gctataacct ggtggtgctg gactcccaga acaacccggc gaaagagctg gcgaacgtgc
     5281 aggacttaac cgttcgcggc accaaaattc tgctgattaa cccgaccgac tccgacgcag
     5341 taggtaatgc tgtgaagatg gctaaccagg cgaacatccc ggttatcact cttgaccgcc
     5401 aggcaacgaa aggtgaagtg gtgagccaca ttgcttctga taacgtactg ggtggcaaaa
     5461 tcgccggtga ttacatcgcg aagaaagcgg gtgaaggtgc caaagttatc gagctgcaag
     5521 gcattgctgg tacatccgca gcccgtgaac gtggcgaagg cttccagcag gccgttgctg
     5581 ctcacaagtt taatgttctt gccagccagc agattttgat cgcactaaag gtttgaacgt
     5641 aatgcagaac ctgttgaccg ctcatccgga tgttcaggct gtattcgcgc agaatgatga
     5701 aatggcgctg ggcgcgctgc gcgcactgca aactgccggt aaatcggatg tgatggtcgt
     5761 cggatttgac ggtacaccgg atggcgaaaa agcggtgaat gatggcaaac tagcagcgac
     5821 tatcgctcag ctacccgatc agattggcgc gaaaggcgtc gaaaccgcag ataaagtgct
     5881 gaaaggcgag aaagttcagg ctaagtatcc ggttgatctg aaactggttg ttaagcagta
     5941 gttttaatca ggttgtatga cctgatggtg acataaatac gtcatcgaca gatgaacgtg
     6001 taatataaag aaaagcaggg cacgcgccac cctaacacgg tggcgcattt tatggacatc
     6061 ccgaatatgc aaaacgcagg cagcctcgtt gttcttggca gcattaatgc tgaccacatt
     6121 cttaatcttc aatcttttcc tactccaggc gaaaccgtaa ccggtaacca ctatcaggtt
     6181 gcatttggcg gcaaaggcgc gaatcaggct gtggctgctg ggcgtagcgg tgcgaatatc
     6241 gcgtttattg cctgtacggg tgatgacagc attggtgaga gcgttcgcca gcagctcgcc
     6301 actgataaca ttgatattac tccggtcagc gtgatcaaag gcgaatcaac aggtgtggcg
     6361 ctgatttttg ttaatggcga aggtgagaat gtcatcggta ttcatgccgg cgctaatgct
     6421 gccctttccc cggcgctggt ggaagcgcaa cgtgagcgta ttgccaacgc gtcagcatta
     6481 ttaatgcagc tggaatcacc actcgaaagt gtgatggcag cggcgaaaat cgcccatcaa
     6541 aataagacta tcgttgcgct taacccggct ccggctcgcg aacttcctga cgaactgctg
     6601 gcgctggtgg acattattac gccaaacgaa acggaagcag aaaagctcac cggtattcgt
     6661 gttgaaaatg atgaagatgc agcgaaggcg gcgcaggtac tgcatgaaaa aggtatccgt
     6721 actgtactga ttactttagg aagtcgtggt gtatgggcta gcgtgaatgg tgaaggtcag
     6781 cgcgttcctg gattccgggt gcaggctgtc gataccattg ctgccggaga tacctttaac
     6841 ggcgcgttaa tcacggcgtt gctggaagaa aaaccattgc cagaggcgat tcggtttgcc
     6901 catgctgcag ctgcgattgc cgtaacacgt aaaggcgcac aaccttccgt accgtggcgt
     6961 gaagagatcg acgcattttt agacaggcag aggtgacgct tggctacaat gaaagatgtt
     7021 gcccgcctgg cgggcgtttc tacctcaaca gtttctcacg ttatcaataa agatcgcttc
     7081 gtcagtgaag cgattaccgc caaagttgaa gcggcgatta aagaactcaa ttacgcgcca
     7141 tcagccctgg cgcgtagcct caaactcaat caaacacata ccattggcat gttgatcact
     7201 gccagtacca atcctttcta ttcagaactg gtgcgtggcg ttgaacgcag ctgcttcgaa
     7261 cgcggttata gtctcgtcct ttgcaatacc gaaggcgatg aacagcggat gaatcgcaat
     7321 ctggaaacgc tgatgcaaaa acgcgttgat ggcttgctgt tactgtgcac cgaaacgcat
     7381 caaccttcgc gtgaaatcat gcaacgttat ccgacagtgc ctactgtgat gatggactgg
     7441 gctccgttcg atggcgacag cgatcttatt caggataact cgttgctggg cggagactta
     7501 gcaacgcaat atctgatcga taaaggtcat acccgtatcg cctgtattac cggtccgctg
     7561 gataaaactc cggcgcgcct gcggttggaa ggttatcggg cggcgatgaa acgtgcgggt
     7621 ctcaacattc ctgatggcta tgaagtcact ggtgattttg aatttaacgg cgggtttgac
     7681 gccatgcgcc aactgttatc acatccgctg cgtcctcagg ccgtctttac cggaaatgac
     7741 gctatggctg ttggcgttta ccaggcgtta tatcaggcag agttacaggt tccgcaggat
     7801 atcgcggtga ttggctatga cgatatcgaa ctggcaagct ttatgacgcc accattaacc
     7861 actatccacc aaccgaaaga tgaactgggg gagctggcga ttgatgtact catccatcgg
     7921 ataacccagc cgacccttca gcaacaacga ttacaactta ctccgattct gatggaacgc
     7981 ggttcggctt agatttacgc tgtcttttga tcaaattatt accatcggtt gttttcagaa
     8041 gcatgaacat tgctgctgaa gcaacagtaa taatgcccat cgtgataaac gtatagtgga
     8101 attgttcgac agtcgttgtg ccttccatcc cttcataaac gcgaaggacg gccgcactta
     8161 cagcaacgcc taaactaatc gacagttgct gcgtgaccgc cagaacactg ttaccgctgc
     8221 tggcgttgtc atcggtcaga tcggcaagtg tgatggtatt catcgcggta aattgcgtcg
     8281 acatagccat ccctaatata aacaacggca agatcagcat ccatatcgcc attgccggtg
     8341 attgcaaaga gaactgagcg atcattagcc caataatcac cgtgatcccc actaacgtat
     8401 ggcgatagcc cagacgacgt aagacttggg taaccatcga ttttgcaata atggaaccta
     8461 acgctgtcgg tgccatcata cagccggcaa taaacgcctg ataaccaaat cctacctgta
     8521 acatcaatgg cataaggaac ggtacactac cggtccccag acgggttgca atattgccta
     8581 cgataccgat cgagaaagtg cgggttttaa ataaatctaa tgaaattaat gggtttggcg
     8641 tgtgtcgcgc atggagaata tagagaagca gtaacccgat gctggtgaca attaccgtca
     8701 aggcaatcca gctggcgaca atcttttccc cgaatagctc tattccgctt gagaagagaa
     8761 caaggctgag gccaaacagc aaaaagccag tgatatcgaa tctgcgttgt gcggtggtga
     8821 aattgggcat atgtttgcgc gcgtaaagaa ggcccgcaat acctatgggg atattgatta
     8881 aaaatatcca gtgccaggtt gccctggtga ccagcacgcc gccaagaacg gggcctaaaa
     8941 ttggccccac cagacccggc atggcgacaa aattcaatac aggaagaagt tcattacgag
     9001 gataagcacg cagtaaggcc agccgagcaa caggcatcat cattgcgccg cctatcccct
     9061 gaataacccg gaagacaacc agctgtggta gcgaattaga aagtgcgcag gccagagaac
     9121 ccaacgtgaa cagactcacg gcaagggtaa aaatgcgacg cgtaccgaag cgatcggcta
     9181 gccatccgct taccggaata aacatcgcca ccgtcagcgt ataactgatg atggctgatt
     9241 gcatcgcgag aggagaacga ttaaggctat gagcgattgc gggtaaggcg gtattcagaa
     9301 tagtggcatc aagtgcctgc atgaagaagg ccatcgccgc gatccacggc aaacccgcca
     9361 tactacgctt ctttttatcg ctcattcaat gtcctgttat cgggttatca cttatcaggt
     9421 gagcgtagca gcgcctgaca agttttaaat gccgcgtcgc catcgctttg gataatcgca
     9481 tcgacaatcg cctggtgcag atccagcttt atcactgtgt cgctggtaat tgacgtgaag
     9541 taagtgtgat aaaccgaatg gaatagcgag gcgaatgagg tcaaaaacgg attggcgctc
     9601 atttcataga tatgctcatg ccaggccata tcgacttcga tccagcgttc acggcgaaag
     9661 ttctttttta atgccgccat ttcggccatt aacgtattga gatgcgcctt ctgttccgcg
     9721 gtgccaaccg ttgctgccag taggcaggct tgcggctcca gacagatacg cataaccaga
     9781 aagtgatcga tgacctgatg aaagttctct tctgtcatcc accaggtaag caattcctga
     9841 tcaagaaaat tccagtttga ttgtggcatg acccgggtac caattcgcgg tcgcggtaaa
     9901 accatccctt ttgccgttaa cgttttgacc gcttcgcgta ccgctgtacg actcactcca
     9961 aattgctcgc ccagctcaat ctcaccaggc aaaatggtgc cgggttcata ttcacctttt
    10021 aagatgcgtt gcgccagctt ctcagccaga acatacgaaa ggtttttctg tgcagctaac
    10081 tgttgtgcgc ttaaaggcat tactaatctt cctttttctt tttattcctc cttagtatgc
    10141 caccaggaag tgtgattacg gttgcaaaaa cggcaaattg cttgttttat ggcacattaa
    10201 cggggctttt gct
//
LOCUS       DADMIB010000155        10160 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.157, whole genome shotgun sequence.
ACCESSION   DADMIB010000155 DADMIB010000000
VERSION     DADMIB010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10160)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10160)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10160
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.157"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..619
                     /locus_tag="JNZ89_003516"
     CDS             <1..619
                     /locus_tag="JNZ89_003516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HAY8937261.1"
                     /translation="GQSILQRHIASFSHHGLPQGSDDALRYIAEHDDALAFACINRQM
                     IALRIMQQVKATGSPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNGLVIIPGSRGDY
                     SWIVQPVANEKTLHSLAHGAGRKWGRTECKWRLAAKYTVTQLSRTELGSRIICRDKQL
                     IFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG"
     gene            616..1230
                     /locus_tag="JNZ89_003517"
     CDS             616..1230
                     /locus_tag="JNZ89_003517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY8937262.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1287..2744)
                     /gene="pepD"
                     /locus_tag="JNZ89_003518"
     CDS             complement(1287..2744)
                     /gene="pepD"
                     /locus_tag="JNZ89_003518"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY8937263.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3005..3463
                     /gene="gpt"
                     /locus_tag="JNZ89_003519"
     CDS             3005..3463
                     /gene="gpt"
                     /locus_tag="JNZ89_003519"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY8937264.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3555..4799
                     /gene="frsA"
                     /locus_tag="JNZ89_003520"
     CDS             3555..4799
                     /gene="frsA"
                     /locus_tag="JNZ89_003520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HAY8937265.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIVMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            4857..5258
                     /locus_tag="JNZ89_003521"
     CDS             4857..5258
                     /locus_tag="JNZ89_003521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HAY8937266.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5297..6352)
                     /gene="phoE"
                     /locus_tag="JNZ89_003522"
     CDS             complement(5297..6352)
                     /gene="phoE"
                     /locus_tag="JNZ89_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HAY8937267.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGGEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAIGMTYQF"
     gene            6640..7743
                     /gene="proB"
                     /locus_tag="JNZ89_003523"
     CDS             6640..7743
                     /gene="proB"
                     /locus_tag="JNZ89_003523"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HAY8937268.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7755..9008
                     /gene="proA"
                     /locus_tag="JNZ89_003524"
     CDS             7755..9008
                     /gene="proA"
                     /locus_tag="JNZ89_003524"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HAY8937269.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9123..9198
                     /locus_tag="JNZ89_003525"
     tRNA            9123..9198
                     /locus_tag="JNZ89_003525"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9156..9158,aa:Thr,seq:cgt)
     gene            complement(9213..>10160)
                     /locus_tag="JNZ89_003526"
     CDS             complement(9213..>10160)
                     /locus_tag="JNZ89_003526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY8937270.1"
                     /translation="KKSLDDDKSRIGFWLQHFAGMQLRDITESKIYSAMQKMTNRRHE
                     ENWKLRAEACRKKGKPVPEYTPKPASVATKATHLSFIKALLRAAEREWKMLDKAPIIK
                     VPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSNIINLEWQQIDMQRR
                     VAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESCTKPDGTKAPTVRK
                     MRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQEMGGWESIEMVRR
                     YAHLAPNHLTEHARQIDSILNPSVPNLSQSRNKERTNDV"
BASE COUNT         2431 a         2501 c         2649 g         2579 t
ORIGIN      
        1 ggggcagtct attttacagc ggcatattgc ctcgttctcg catcatggtt tgcctcaagg
       61 cagtgacgac gcgctacggt atattgcgga acatgacgat gcgctggcgt ttgcgtgtat
      121 taatcgccag atgatcgctt tgcgcataat gcaacaagtt aaggccacgg gaagtccggt
      181 tctggatgtg gcgcataact ttgttagcgc gtgtcaaatc ggcgatcaac agggctggtt
      241 gcatcgtaaa ggtgccacgc cggatgacaa cggtctggtg attattcccg gttcacgtgg
      301 tgattactcc tggattgtac agcctgttgc gaacgaaaaa acgctccact cgctggcgca
      361 tggggcaggg cgtaaatggg ggcgcaccga gtgtaaatgg cgtctggcag cgaaatacac
      421 ggtgacgcaa ctctcgcgga ctgaacttgg cagtcggata atttgtcgcg ataaacaact
      481 catctttgaa gaagcgccac aagcctataa atcggctgaa agcgtggtgc aatgtctggt
      541 gcaggccggt ttaattattc ctgtcgcgcg gctgcgtccg gtgctaacgc tcaaaaacag
      601 tggagggaaa aaaggatgat cttgctacaa ctctcctcag cgcaggggcc ggaagaatgt
      661 tgtctcgcag tgaaaaaggc gctggacagg ctaattaaag aagctgcccg acaagacgtc
      721 gcggtaacgg tgttggaaac agaaacgggc cgctactctg acacgctgcg ttcagctctg
      781 gtttctctgg atggcgataa cgcatgggca ttaagcgaaa gctggtgtgg cactattcag
      841 tggatttgtc cgagtccgta tcggcctcat catgggcgca aaaactggtt tctgggcatt
      901 gggcgtttta ccgctgatga gcaggagcaa tccgatgcga tccggtatga gacgctgcgt
      961 tcgtcggggc cgggcggtca acatgtcaat aaaaccgact cggcggtacg cgccacgcat
     1021 ttggcatccg gtattagcgt gaaggttcag tcagagcgta gtcagcatgc taacaagcgg
     1081 ctggcacgat tgctgattgc ctggaagctg gagcagcagc aacaggaaaa tagcgcggtg
     1141 ctgaaatcgc agcggcgaat gttccatcac cagattgaac gtggcaaccc gagacggaca
     1201 tttacaggga tggcttttat cgaaggataa tgaaggatga aactgccgga aggcgattaa
     1261 acgccatccg gcagcaaatc aaataattac ttcgccggaa tttctttcag cagttcagtc
     1321 agcagtgtcc agtaatgacc tacgctttcg atgtgaactt gctcatccgg agagtgtgga
     1381 ccggtgatag ttggcccgat agaaaccatg tccatttccg gatacggttt tttgaacaga
     1441 ccacattcca ggcccgcgtg gataatctgg atgttcggcg tcttgttgaa caggcgctga
     1501 taggtttcac gtaccagatg catcaccgga gaattagcgt ccggctgcca gccaggatat
     1561 gcgcctttcg cttcggtttt cgcgccagcc agtttaccca gcgaatccag catgctcacc
     1621 acgtagtctt taccgctgtc gatcagtgaa cggatcaggc agtgaatttc tacgttattg
     1681 tcagtcatgg tcaccacacc gacgttcagg gaggtttcaa ccacaccttt ggctacatcg
     1741 gagttgcgga tcacaccgtt cggggtggcg ttcagcagac gaataaaggt atcgcgagat
     1801 ttcgcaatca gggcagcttt atcgttcgct acagagtcca gcaacaaggc cagatttttc
     1861 tctttctctg ccagctcgtt tttcaggatc tcctgatagg tattcaccag agatttcagt
     1921 gcgtcgactt tatcagctgc gacagcaatg gtcgcaaagg cttcacgcgg gatggcgtta
     1981 cgcagtgtgc cgccgttgaa atcgataagg cgcaggtcca gttcttctgc atgacccgcc
     2041 aggaagcgca ccagcagttt gttggcatta cccaggccaa cgtggatttc accgccggag
     2101 tgaccgcctt tcagaccttt taaggttaac ttgaaggttt caaaaccagc tggaaccgct
     2161 tcacgatcta aatgcaggtt ggaggtgaag tcgatacccc ccgcacaacc catgtagatt
     2221 tcaccttctt cttcggagtc ggtgttaatc agaatatcag cctgcaacca gttgctctgt
     2281 aagccaaaag caccgtccat accggcttct tcggtcatgg tcagcagcac ttccagcgga
     2341 ccgtgaacca cgttttcgtc agccagaacc gccagtgcag aggccatacc aatgccgtta
     2401 tccgcaccca gcgtggtgcc gcgcgcttta acccattcgc catcaatata aggctggata
     2461 ggatctttcg tgaagtcatg cacggtgtcg ttatttttct gcggcaccat atcgaggtgg
     2521 gcctgtaaga cgaccggttt acgattttcc atacctgcgg tagcaggttt acgaatcagg
     2581 atattaccta cctgatcgcg ttcgacatgg aaacctttct cttttgccca accaacaatg
     2641 tattcagcga gttgctcttc atgataggac gggtgcggaa tagaacagat tttggcaaaa
     2701 atatcccaca gcggctgtgg agataattga gacagttcag acacgttaag tctccttgtc
     2761 gatcacccgc aaaacagtat tgcaggtcac agggttagca gaaaatgttg tcaacacaag
     2821 acaggcttgc gagatatgtt tgagaatacc actttatccc gcgtcaggga gaggcagtgc
     2881 gtaaaaagac gcggactcat gtgaaatact ggtttttagt gcgccagatc tctataatct
     2941 cgcgcaacct attttcccct cgaacacttt ttaagccgta gataaacagg ctgggacact
     3001 tcacatgagc gaaaaataca tcgtcacctg ggacatgttg cagatccatg cacgtaaact
     3061 cgcaagccga ctgatgcctt ctgaacaatg gaaaggcatt attgccgtaa gccgtggcgg
     3121 tctggtaccg ggtgcgttac tggcgcgtga actgggtatt cgtcatgtcg ataccgtttg
     3181 tatttccagc tacgatcacg acaaccagcg agagcttaaa gtgctgaaac gcgcagaagg
     3241 cgatggcgaa ggcttcatag ttattgatga cctggtggat accggtggta ctgctgttgc
     3301 gattcgtgaa atgtatccaa aagcgcactt tgtcaccatc ttcgcaaaac cggctggtcg
     3361 tccgctggtt gatgactatg ttgttgatat tccgcaagat acctggatcg aacagccgtg
     3421 ggatatgggc gtcgtattcg tcccgccaat ctccggtcgc taatcttttc aacgcctggc
     3481 actgccgggc gttgttcttt ttaacttcag gcaggttaca atagtttcca gtaagtattc
     3541 tggaggctgc atccatgaca caggcaaacc tgagcgaaac cctgttcaaa ccccgcttta
     3601 aacatcctga aacctcgacg ctagtccgcc gctttaatca cggcgcacaa ccgcctgtgc
     3661 agtcggctct tgatggtaaa accatccctc actggtatcg catgattaac cgtctgatgt
     3721 ggatctggcg cggtattgac ccacgtgaaa tcctcgacgt ccaggcacgt attgtgatga
     3781 gcgatgctga acgtaccgac gatgatttat acgatactgt gattggctac cgtggtggca
     3841 actggattta tgagtgggcc acccaggcga tggtgtggca acaaaaagcc tgtgcggaag
     3901 aagatccgca actcagtggt cgacactggc tgcatgcggc tacgttgtac aacattgccg
     3961 cctatcctca tctgaaagga gatgacctgg ccgagcaagc gcaggcttta tcaaaccgcg
     4021 cctatgaaga ggccgcccag cgtctgccgg gcacgatgcg gcagatggag tttaccgtac
     4081 ccggcggtgc gcccatcacc ggctttttgc atatgccgaa aggcgatggc ccgttcccga
     4141 cagtattaat gtgtggtggt ctggatgcga tgcagacgga ctattacagc ctgtatgaac
     4201 gttattttgc gccgcgcggc attgtgatgc tgactattga tatgccgtcg gtgggctttt
     4261 cttcaaaatg gaagctcacc caggactcca gcctgttgca tcagcacgtc ttaaaggcgc
     4321 tgcctaacgt accgtgggtg gatcacactc gcgtcgcggc ctttggtttc cgtttcggcg
     4381 ctaacgttgc cgtgcgtctg gcatatcttg aatcgccgcg tctgaaagcg gttgcctgtc
     4441 ttggtccggt agttcatacc ctgttgagtg attttaagtg ccagcaacag gtgccggaaa
     4501 tgtatcttga cgttctggcg agtcgtttgg ggatgcatga tgcttccgac gaagcgttac
     4561 gcgtggagct gaatcgctat tcattaaaag tgcaaggatt gctgggacgt cgctgcccaa
     4621 cgccaatgtt atcaggctac tggaagaacg atccgttcag cccggaagag gactcacgct
     4681 taatcacctc atcatctgct gacggtaaat tattagagat cccatttaac ccggtgtatc
     4741 ggaattttga caaaggtctt caggaaatca ccggctggat cgaaaaacgc ttgtgttaaa
     4801 aatttgctaa attttgccaa tttggtaaaa cagttgcatc acaacaggag atagcaatga
     4861 cgttaccgag tggacacccg aagagcagat tgatcaaaaa atttaccgca ctaggcccgt
     4921 atattcgtga aggtaagtgc gaagataatc gattcttttt cgattgtctg gctgtatgcg
     4981 tcaacgtgaa accggcaccg gaagtgcgtg aattctgggg ctggtggatg gagctggaag
     5041 cgcaggaatc ccgttttacc tacagctacc agtttggtct gttcgataaa gcaggcgact
     5101 ggaagagtgt tccggtaaaa gatactgaag tggttgaacg actggagcac accctgcgtg
     5161 agtttcacga gaagctgcgt gaactgctga cgacgctgaa tctgaagctg gaaccggcgg
     5221 atgattttcg tgacgagccg gtgaagttaa cggcgtgagt gaaatgtgcc ggatgcatca
     5281 catccggcaa tatctattaa aactgatacg tcatcccaat cgcgacaata tcatcattat
     5341 taatattcaa tttgttatcg ctatccagtt ggttgatttt ataatcaaca aatgctgaca
     5401 tatttttgtt gaaataatac gtagcaccga cgtcgatata attaaccaga tcttcaccac
     5461 cgatgccctc aatatctttc cctttcgata agacataacc cagcgatgga cgcagaccaa
     5521 agtcaaactg gtattgagcg accgcttcaa agttctgtgt cttattggca aagccgccag
     5581 ttattggcgt cattttgcga gtttcagaat agaaagttgc cagataaata ttattggcat
     5641 cgtatttcag acctgttgcc catgcttctg cacgcttgcc tgtgccacgg ctttgcaggt
     5701 tctgctcgtt ggtgcgatct gagttggtat aggccccact aatggcgaaa tcgctgccgc
     5761 caaagtcata tgtcaatgac gtgccgaagc catcgccgtt ttgcttttta acgtcgcggt
     5821 tttcgttttt cccttgatat tgcagggtta agttcaggcc atcgataacg ccgaagaagt
     5881 cggtgttccg atacgtcgcc agaccgctgg cgcgtttggt cataaagttg tcggtctgcg
     5941 ccgaggagtc gccaccaaat tccggaaaca tatcggtcca ggcttccacg tcatacaacg
     6001 cgcccaggtt acgaccataa tcgaaagaac ccaaatcttt atatttcaac ccggcaaaag
     6061 cgagacgcgt tttttgctgt gcagtatcac tctctgcttt attaccggca aactctgctt
     6121 cccaacgacc ataaccagtc agttgatcgt taatttgtgt ttcgccttta aaaccaaaac
     6181 ggatataact ctggtcgcca tctttactgt cgttatcact catataatgc atggctttaa
     6241 ctttgccata gacatccagt ttattaccgt ctttgttata tatttctgcg gcctgtacgg
     6301 atgcagatgc cacaatgccc atcaccacta atgccagagt gctctttttc attttcattc
     6361 ctgattttaa ttaacgcgcg aatattcagc gggagagccc cgttgaaaac aggaaagttt
     6421 ttaacctgag attgttaaag atatattaca gattaataat attcttaaaa tgtggtaatt
     6481 tattaaatct gtaataaaag cgtaaacaac tgccgctagg cttgctgatc ccgcgcaaca
     6541 aaacgccatg ctttgctcgc agatggttgg caaccgacga cagtcctgct aaaacgttcg
     6601 tttgatatca tttttcctaa aattgaatgg cagagaatca tgagtgacag ccagacgctg
     6661 gtggtaaaac tcggcaccag tgtgctaaca ggcggatcgc gccgtctgaa ccgtgcccat
     6721 atcgttgaac ttgttcgcca gtgcgcgcag ttacatgccg ccgggcatcg gattgttatt
     6781 gtgacgtcgg gcgcgatcgc cgccggacgt gagcacttgg gttacccgga actgccagcg
     6841 actatcgcct cgaaacaact gctggcagcg gtagggcaga gtcgactgat tcaactgtgg
     6901 gaacagctgt tttcgattta tggcattcac gtcgggcaaa tgctgctgac ccgtgctgat
     6961 atggaagacc gtgaacgctt cctgaacgcc cgcgacaccc tgcgtgcgtt gctcgataac
     7021 aatatcgttc cggtaatcaa tgagaacgat gctgtcgcta cggcagagat taaagtcggc
     7081 gataacgata acctttctgc gctggcggcg attctggcgg gtgccgataa actgttgctg
     7141 ctgaccgatc aaaaaggttt gtataccgct gacccgcgca gcaatccgca ggcagaactg
     7201 attaaagatg tttacggcat tgatgacgca ctgcgcgcga ttgccggtga cagcgtttca
     7261 ggcctcggaa ctggcggcat gagtaccaaa ttgcaggccg ctgacgtggc ttgccgtgcg
     7321 ggtatcgaca ccattattgc cgcgggcagc aagccgggcg ttattggtga tgtgatggaa
     7381 ggcatttccg tcggtacgct gttccatgcc caggcgactc cgcttgaaaa ccgtaaacgc
     7441 tggattttcg gtgcgccgcc ggcgggtgaa atcacggtag atgaaggggc aactgccgcc
     7501 attctggaac gcggcagctc cctgttgccg aaaggcatta aaagcgtgac tggcaatttc
     7561 tcgcgtggtg aagtcatccg catttgcaac ctcgaaggtc gcgatatcgc ccacggtgtc
     7621 agtcgttaca acagcgatgc attacgccgt attgccggac accactcgca agaaattgat
     7681 gcaatactgg gatatgaata cggcccggtt gccgttcacc gtgatgacat gattacccgt
     7741 taaggagctg gccgatgctg gaacaaatgg gcattgccgc gaagcaagcc tcgtataaat
     7801 tagcgcaact ctccagccgc gaaaaaaatc gcgtgctgga aaaaatcgcc gatgaactgg
     7861 aagcacaaag cgaaatcatt ctcaacgcta acgcccagga tgttgctgac gcgcgagcca
     7921 atggccttag cgaagcgatg cttgaccgtc tggcactgac gcccgcacgg ctgaaaggca
     7981 ttgccgacga tgtacgtcag gtgtgcaacc tcgccgatcc ggtggggcag gtaatcgatg
     8041 gcggcgtact ggacagcggc ctgcgtcttg agcgtcgtcg cgtaccgctg ggagttattg
     8101 gcgtgattta tgaagcgcgc ccgaacgtga cggttgatgt cgcttcgctg tgcctgaaaa
     8161 ccggtaatgc ggtgatcctg cgcggtggca aagaaacgtg tcgcactaac gctgcaacag
     8221 tggcggtgat tcaggacgcc ctgaaatcct gcggcttacc ggcgggtgcc gtgcaggcga
     8281 ttgataatcc tgaccgtgcg ctggtcagtg aaatgctgcg tatggataaa tacatcgaca
     8341 tgctgatccc gcgtggtggc gctggtttgc ataaactgtg ccgtgaacag tcgacaatcc
     8401 cggtgatcac aggtggtata ggcgtatgcc atatttacgt tgatgaaagt gtagagatcg
     8461 ctgaagcatt aaaagtgatc gtcaacgcga aaactcagcg tccgagcaca tgtaatacgg
     8521 ttgaaacgtt gctggtgaat aaaaacatcg ccgatagctt cctgcccgca ttaagcaaac
     8581 aaatggcgga aagcggcgtg acattacacg cagatgcagc tgcactggcg cagttgcagg
     8641 caggccctgc gaaggtggtt gctgttaaag ccgaagagta tgacgatgag tttctgtcat
     8701 tagatttgaa cgtcaaaatc gtcagcgatc ttgacgatgc catcgcccat attcgtgaac
     8761 acggcacaca acactccgat gcgatcctga cctgcgatat gcgcaacgcc cagcgttttg
     8821 ttaacgaagt ggattcgtcc gctgtttacg ttaacgcctc tacgcgtttt accgacggcg
     8881 gccagtttgg tctgggtgcg gaagtggcgg taagcacaca aaaactccac gcgcgtggcc
     8941 caatggggct ggaagcactg accacttaca agtggatcgg cattggtgat tacaccattc
     9001 gtgcgtaaat aaaaccgggt gatgcaaaag tagccatttg attcacaagg ccattgacgc
     9061 atcgcccggt tagttttaac cttgtccacc gtgattcacg ttcgtgaaca tgtcctttca
     9121 gggccgatat agctcagttg gtagagcagc gcattcgtaa tgcgaaggtc gtaggttcga
     9181 ctcctattat cggcaccatt taaatcaata agttacacat cattagtacg ttccttattt
     9241 cttgactggg acaaatttgg gaccgatggg ttcagaatcg agtctatttg ccgtgcgtgt
     9301 tcggtaaggt gattaggtgc gaggtgagca tatcgacgaa ccatttcgat agactcccag
     9361 cctcccattt cctgtaacac tgataacggg actccggctt gaaccagcca acttgcccag
     9421 gtgtgtctca agtcgtgaaa tctgaaatca tcaatacctg ctcgtctcag cgccgctttc
     9481 caggctgtgt ttgcgtcata ccgcatcttc ctgactgttg gcgctttcgt tccgtctggt
     9541 ttggtacagc tttccttata cacaaatacc caacggtgat gattcccgat ttgttttttc
     9601 aatacgcgac atgcagtatc attcagcgca acgccaattg cgcggtttga tttactctct
     9661 tccgggttta tccatgccac ccggcgctgc atgtctattt gttgccattc aaggttgatg
     9721 atgttcgagc gtcttaagcc tgttgcaagt gcaaattcaa caacagactt taatggctcc
     9781 ggacattcat caatcagcct ttgtgcttca tgaggctcca gccagcggat ccgtttattc
     9841 tttggttgag gcactttaat aattggtgcc ttatccagca ttttccattc acgctctgcg
     9901 gctcttagca gggcctttat aaatgaaaga tgcgtagcct tcgttgcaac ggacgctggt
     9961 tttggcgtgt attctggaac aggtttccct ttttttctgc atgcttctgc cctgagtttc
    10021 cagttttcct catgacgccg gttcgtcatt ttctgcattg ctgaataaat ttttgattca
    10081 gtaatgtctc ttagttgcat tcctgcgaaa tgttgaagcc agaatccgat ccggcttttg
    10141 tcatcgtcca gtgatttttt
//
LOCUS       DADMIB010000156        10146 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.158, whole genome shotgun sequence.
ACCESSION   DADMIB010000156 DADMIB010000000
VERSION     DADMIB010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10146
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.158"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..236
                     /locus_tag="JNZ89_003527"
     CDS             <1..236
                     /locus_tag="JNZ89_003527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8937271.1"
                     /translation="TLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLV
                     YEKTYTAELSSIAGTPIEAGPFDTVVLFKINYN"
     gene            343..1434
                     /locus_tag="JNZ89_003528"
     CDS             343..1434
                     /locus_tag="JNZ89_003528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HAY8937272.1"
                     /translation="MLYRYTKEKIMRERRMPVLQWGMLCVLSLLLSIGFLAVHLPAAL
                     LLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAANWPIVLAI
                     LLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYL
                     RVLFVAGAAVLVTCMMLGDNAEAVNQQIVWFPPVSINLLLTILLAVVAGTAGCMLRLP
                     SGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQ
                     ILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPDGLDTVAVIAAGSNADMALIMA
                     MQTLRLFSILLTGPAIARFISTYAPKRSA"
     gene            complement(1431..2222)
                     /gene="nei"
                     /locus_tag="JNZ89_003529"
     CDS             complement(1431..2222)
                     /gene="nei"
                     /locus_tag="JNZ89_003529"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease VIII"
                     /protein_id="HAY8937273.1"
                     /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQH
                     VTHVGTRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL
                     LYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD
                     QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE
                     NKHHGALFRFKVFHRDGELCERCGGIIEKTTLSSRPFYWCPGCQH"
     gene            complement(2258..2992)
                     /gene="pxpA"
                     /locus_tag="JNZ89_003530"
     CDS             complement(2258..2992)
                     /gene="pxpA"
                     /locus_tag="JNZ89_003530"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HAY8937274.1"
                     /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACV
                     REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH
                     VKPHGMLYNQAAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVF
                     ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLH
                     GDGEHALAFARRLRSTFAEKEIVVAA"
     gene            complement(2982..3914)
                     /gene="pxpC"
                     /locus_tag="JNZ89_003531"
     CDS             complement(2982..3914)
                     /gene="pxpC"
                     /locus_tag="JNZ89_003531"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpC"
                     /protein_id="HAY8937275.1"
                     /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV
                     GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL
                     KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLNVGIGGLEGRLLKDGDRLPIGKSKRDFM
                     EAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSPQSNRMGYRLQGQILKR
                     TTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQ
                     PIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN"
     gene            complement(3908..4564)
                     /gene="pxpB"
                     /locus_tag="JNZ89_003532"
     CDS             complement(3908..4564)
                     /gene="pxpB"
                     /locus_tag="JNZ89_003532"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HAY8937276.1"
                     /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV
                     EAIPGMNNITVILRNPESLALDAIELLQRWWEESEALEPESRFIEIPVVYGGAGGPDL
                     AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA
                     GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
                     "
     gene            complement(4587..5330)
                     /gene="ybgI"
                     /locus_tag="JNZ89_003533"
     CDS             complement(4587..5330)
                     /gene="ybgI"
                     /locus_tag="JNZ89_003533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radiation resistance protein YbgI"
                     /protein_id="HAY8937277.1"
                     /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
                     SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA
                     HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDT
                     GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
                     ERGGIRALSEWLNENTDLDVTFIDIPNPA"
     gene            5601..7082
                     /gene="dtpD"
                     /locus_tag="JNZ89_003534"
     CDS             5601..7082
                     /gene="dtpD"
                     /locus_tag="JNZ89_003534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide permease DtpD"
                     /protein_id="HAY8937278.1"
                     /translation="MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYND
                     THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF
                     LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY
                     AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV
                     LLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF
                     SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE
                     SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL
                     FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINY
                     SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES"
     gene            complement(7124..8542)
                     /gene="phrB"
                     /locus_tag="JNZ89_003535"
     CDS             complement(7124..8542)
                     /gene="phrB"
                     /locus_tag="JNZ89_003535"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HAY8937279.1"
                     /translation="MTTHLVWFRQDLRLHDNLALAAACSNSSARVLALYIATPRQWAT
                     HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY
                     NYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
                     RLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQN
                     GAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSEL
                     IWREFYRHLMTYYPSLCKHCPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL
                     NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD
                     AAPYFRIFNPTTQGEKFDREGEFIRRWLPELRDVPGKAVHEPWKWAQKAGVMLDYPQP
                     IVDHKEARLRTLAAYEEARKGA"
     gene            complement(8539..9048)
                     /locus_tag="JNZ89_003536"
     CDS             complement(8539..9048)
                     /locus_tag="JNZ89_003536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HAY8937280.1"
                     /translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF
                     LAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGY
                     FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV
                     INLRHSGVL"
     gene            complement(9333..9719)
                     /locus_tag="JNZ89_003537"
     CDS             complement(9333..9719)
                     /locus_tag="JNZ89_003537"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937281.1"
                     /translation="MWNDIFTKLSIAILLAFSAYVHAETSAPIFFEDVGSIDSWFSIK
                     YQKYENVKDEQYPEILIYYGVKGSGINRVDGWFFSCAKAGRTCSLIFMADFGESRYFK
                     PAKIAMNKNNLIIRTSDVEIAFKITK"
     gene            complement(9692..>10146)
                     /locus_tag="JNZ89_003538"
     CDS             complement(9692..>10146)
                     /locus_tag="JNZ89_003538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8937282.1"
                     /translation="LGLIDKPAPVFNRDLNSDPYYLAVNNCYSYALNRYGNPGSRIFG
                     GGGLQPGELSGKEFSKLTCGSIFEASKNDGAKDLDNGSCPSGYHKAQLFIRPHNFIGM
                     GGDYHWYRQDANGEWSDKQGVGAIRFRGKDPFPPIDYPEKCGTIFLPN"
BASE COUNT         2364 a         2754 c         2440 g         2588 t
ORIGIN      
        1 aaacgttggt tgaagaagat aaagcattgt tgattggtaa tggtctgaag ctacgtttgc
       61 tggatgaaaa cgcctcgcct tataccttca ataaatatgc tgaatacgcc gatttcacca
      121 gcgacatgtt ggtctacgaa aaaacctata cagctgaact ttcgtccatt gcaggtaccc
      181 ccatcgaggc tgggcccttc gatacagtgg tgctttttaa aattaactat aactgatttg
      241 ccatgatgcc ctttgcagcc ggaaagggca tctctttcag aaaattgctg attttcctct
      301 tttccttgat tactgttatt ttttcctggc ccggctttct ttatgctgta tcgatacacc
      361 aaagagaaaa taatgaggga gcgaaggatg ccagttttgc agtggggaat gttatgtgtg
      421 ctatcacttc tcctttctat tggtttcctc gcggtacatc tcccggcggc gctattactt
      481 gggccgatga tcgccgggat catcttcagt atgcgcggaa ttactctgca acttccccgc
      541 tccgcttttc tcgccgcgca ggccattctt ggctgcatga ttgcgcaaaa cctcactggt
      601 tcgattctca ccacgctggc cgccaactgg ccgatcgtgc ttgctatttt actggtgacg
      661 ctgctttcca gcgccatcgt gggttggtta ttggtgcgct atagctcact gcctggaaat
      721 accggtgcct ggggttcttc tccaggcggc gcagcggcaa tggtcgctat ggcgcaagat
      781 tacggcgcag atattcgcct ggtggcgttt atgcaatatc tgcgagtgct gttcgtcgcg
      841 ggggccgctg ttctggtcac ctgcatgatg ctgggtgata acgctgaagc ggttaaccag
      901 caaatcgtct ggttcccgcc agtgagcatt aatctcctgc ttacgatttt gctcgcagtc
      961 gttgccggta cggcgggatg catgctgcgt cttccttccg gcacgatgct catcccgatg
     1021 ctggcgggcg cagtgctcca gtctggtcag ctcatcacca tcgaactacc ggaatggctg
     1081 ctggcgatgg cgtatatggc aattggctgg cggattggtc ttggtttcga taaacaaatc
     1141 ttactgcggg cactacgccc actaccgcaa atcctgctgt cgatttttgc tctgctggct
     1201 atttgtgcag gtatggcgtg gggactgacc cggtttatgc atattgattt tatgactgcc
     1261 tacctcgcca ccagtcccga cgggcttgat accgtggcgg tcatcgccgc agggagcaat
     1321 gccgatatgg cgcttattat ggcgatgcaa accctgcgcc tgttcagtat tttgctgacg
     1381 gggccagcca ttgcgcggtt tatttcaacc tatgcgccga agcggtcggc ctagtgctgg
     1441 cagcctggac accagtaaaa cgggcgcgag gacaacgtgg ttttctcaat gatgccgcca
     1501 cagcgttcgc acagttcgcc atcacgatga aaaaccttaa agcgaaacag cgccccatga
     1561 tgcttattct catccacctg cccccgcgta gcgtaagaaa accgaggaat ctccagtaac
     1621 gcgtgtgcga gtgcatccag ttgcgccgca ttgagatctt tcgctttatg atttccagtc
     1681 aacccaacct gccagaggat ctccacccgc aaataattgc caagcccagc cagaaacgcc
     1741 tgatcgagca gtaatcctgc aaactgacgg ttacgaaagc gcggtgacaa taaccgttcc
     1801 tttaccacct ccggcgtcag attcggatcc agcacatcgg gaccaacgcg ttgtaaaaac
     1861 ggatgcgtgg tcagttgttc cggcctcaac atctcaatat ccgaggcgct ataaagcaga
     1921 atggttttgt cagccgtttg cagttttacc cgcaatactc gcgtggtctg cggctcttcg
     1981 ccggtatcaa ccacgcgcca gacgccgtaa agctgattat ggctgtagag cgttaagtcg
     2041 ttggaaaaat gagttaacaa cgccttacca cgcgttccca catgggtaac gtgttgaccg
     2101 ataagttgtg attgataagt ttttaactgc gggaaggcaa accagacatc agttagtggt
     2161 ttgcctttga tcgccgcctc caggttatcc gctgcacggc ggatctccgg gccttcaggc
     2221 atggtgatat ccttttttca ttctttatta atcggggtta tgctgcgaca acaatctcct
     2281 tttcggcaaa tgtagagcgt agtcggcggg cgaacgccag tgcgtgctcg ccgtcgccat
     2341 gcaggcagac tgtttgcgcc gtgaccgttg cccattcgcc ggtgatactt ttgactctgc
     2401 cgtgttgcac catctctagc gtttgcgcca gcgcctgttc ttcgttttca atcaacgcgc
     2461 ctggctgact tcgcggcacc agcgagccgt cagcctgata accgcgatcg gcaaacactt
     2521 cctcgcgcgt tgtcaggcca tattgcttgc ctgcacgaat cagctcgctt cctgccagcc
     2581 caacgagaac caatgctgga tcgcaagcgt ataccgctct ggcgatggcg tctgccagtt
     2641 gtgcttcttt cgccgcctgg ttgtacaaca tgccgtgcgg tttgacatga cgcattacgc
     2701 cgccttgcgc acgggcaatc gttgccagcg cgccaatttg atacagcgtc tgggcgtaaa
     2761 cggtttctgg cggcagctgc atggcgctgc gaccaaaatt ttccctgtcg ggaaaactcg
     2821 ggtgagcgcc aatcgcgaca ccatttttta ttgcttcacg cacgcaagcc tgcatggttt
     2881 gggcatcgcc tgcatgaaat ccacaagcaa tattggcaga ggaaaccagc gttaatagct
     2941 ctgcgtcgct ggcgcagcct tcgcccagat cggcgttcag gtcaattttc attgtgtagc
     3001 cgccacgcta attgttcgaa ataacgttgt tgatcttgcc gcgctttcag tgcctcttcc
     3061 agtgaacact ggacaaaatg aatcggctga ccgagcggaa tttgcgccag atggtacata
     3121 tcagcctcaa tgatacaggc aatacgcggg taaccaccgg tggtctgtgc gtcgttcatc
     3181 aacacaatcg gctgcccgtt atgcggcacc tgcaccacac ccggtaacaa accgtgagat
     3241 aacagttcgc gatcggtggt gcgttttaaa atttgcccct gtaagcgata gcccatgcgg
     3301 ttactttgcg ggctaagctg ccagggcgaa cgccagaatg catcctgcga ggcgcgatcg
     3361 aactcatgat attccggccc cggcaaggcg cgaatgcggt tgccccacag cagctgttta
     3421 acgccctgcg cttccataaa atcacgcttc gatttgccaa tcgggagtcg gtcaccatcc
     3481 ttcagtaaac ggccttccag cccgccaatc cccacgttga gatcggtgct gcatgacccc
     3541 attaccggcg gaacatcaat accacccgcg accgccagat aactgcgcat gccgtgctgc
     3601 gggcgtttaa gcgttaaacg ctggcctgct ttcatcggca agcgccagcc ggtccagacg
     3661 gcgttatcat ccagccgcgc ttcgcaaccg gcacccgtca gagcaaacca cccatcagtt
     3721 tcgaactcaa ccgttaactg accgagcgtg atctccagcg cgggggcatt ggcgtcatta
     3781 cccaccagca ggttagcaat gcgtaacgca ggcatatcca gtgcgccgca gtggctgata
     3841 cccgactggc gaaaaccgtg acgaccgcca tcctgcacag tggtatacat gcccgcacga
     3901 ataatcttca gcatactccc tccttctgcg gtacaaagcg cacgctgtct cccggacgta
     3961 ataagatggg ttcgtcacgc gccggatcaa acaggctgag tgaggtatga ccaatcaact
     4021 gccagccacc cggcgttgcc agcggataaa caccagtctg cggcccgccg atcccgacag
     4081 aacctgccgg aacgagcaag cgcggttcag cgcgccgtgg cgtgtgtagt tgttccggca
     4141 aactcccgag atacgggaag cccggttgaa aacctaaaaa ccagaccacg tattccacgg
     4201 aggagtgcaa ttcaacaacc tgtttttcgc tcaacccgca atgcgccgcg accaccgcca
     4261 aatccggtcc gcctgcacca ccgtaaacca ccggaatttc aataaagcga gactcaggtt
     4321 ccagggcctc gctctcctcc caccagcgtt gcaaaagctc tatggcatcc agcgccagcg
     4381 actcaggatt acgcaaaatc accgtgatat tgttcatgcc gggaatggct tcaaccacat
     4441 tcggcatatc caccagacgc tgcgccagtc gccagatccg tttctggcta gccagcgtca
     4501 ccggcggttc cagttccagc actaccgccg tttcacctat cagataacaa cgcgctcgtt
     4561 gcactttcga tccctctgat tattcgttat gcaggattag gaatatcaat aaaggtcaca
     4621 tcaagatcgg tattttcatt cagccactcg ctcaatgcgc gaataccacc acgttcagtg
     4681 gcatggtgac ctgcagcata aaaatgcaat ccctgctcgc gggctgaatg aatggtctgt
     4741 tcagaaactt cgccagtaat aaaagcatcc acgccaaaac gcgcggcgct atcgataaaa
     4801 ctttgcccgc cgcccgtgca ccaggcgacg cgctggacca cctcaggtcc ggtatcgcca
     4861 caccataacg gcttacgtcc cagacgcgct tcaatccagg aggctagttc cagtcccggc
     4921 acaggcatgg tcagctctcc ccacggcacc aacggctcaa tttcgcccat gaccgtgatc
     4981 cccagtaacg ccgccagctg tgcgttattg cccagctcag gatgtgcgtc aagcggcaaa
     5041 tgccagccat acaggttgat atcattcgcc agcaacgttt ttaaacggtt acgcttcatt
     5101 ccgcgaatga ccggagactc tcctttccag aagtagccat gatgcacaat gaccgcatcc
     5161 gcgcccagac gcactgcctc atcgagcaaa gcctggctgg cggtgacacc ggtaacaatt
     5221 ttttgcaccg tctctttgcc ttccacctgc aaaccattcg gcgcgtaatc actaatcgcc
     5281 gcgctgttca gtttttcgtt aatcagttgt tccagttcgg tgtttttcat cttcgcgcct
     5341 tccgtattct gatagctaca ccgttaacat agcgttacct cgcctgttcg tcgatagcca
     5401 atcttttgac atattaagaa acaaacccga cgccaaaaga cgcaaattgt ttatatcatc
     5461 acgcttcagc taatgtatat ttatgcaatc agacagcata ttgcataaat aatcagatct
     5521 gtatcaaagt tttaacttta aggaaacaca agcacgccgc gcaactatta cgtgacgttg
     5581 ccgtcaattg tggaattatt atgaataaac acgcatcaca gccgcgcgct atttactatg
     5641 tcgttgcgct gcaaatctgg gaatatttta gcttttacgg catgcgtgcc ctgctgattc
     5701 tctatctcac caatcaacta aaatacaacg atactcacgc ctacgagtta tttagcgcct
     5761 actgttcgct ggtgtatgtc acgccaatcc tcggtggctt tttggcggat aaagttctcg
     5821 gcaatcgcat ggcggtgatg ctgggggcgt tattgatggc gatcggtcat gtggtgttgg
     5881 gtgccagtga gatccatccg tcattcctct atctgtccct ggcgataatt gtttgtggct
     5941 atggtctgtt taaatccaat gtcagttgcc tgctcggcga gctgtatgag ccaaccgatc
     6001 cgcgtcgtga tggcggtttc tcgctgatgt atgcagcggg taacgtgggg tctattatcg
     6061 cacctattgc ctgtggctac gcccaggaag agtacagctg ggcgatgggc tttggcctgg
     6121 cggcggtggg tatgatcgcg ggtctggtca ttttcttatg tggcaatcgt catttcacac
     6181 atacccgcgg cgttaataaa aaagtactgc gtgcgacaaa ctttctcctg cctaactggg
     6241 gatggctgct ggttctgctg gtggcaacgc ctgcgctgat taccgtattg ttctggaaag
     6301 agtggtcggt atacgcctta attgtcgcga ctattattgg cctgggtgta ctggcaaaaa
     6361 tttatcgcaa agcagaaaac cagaaacagc gtaaggagct ggggctgatt gtgacgctca
     6421 ccttcttcag tatgttgttc tgggccttcg cacaacaggg cggcagctcg attagccttt
     6481 atatcgaccg cttcgttaac cgcgatatgt ttggttatac cgttccgact gctatgttcc
     6541 agtcgattaa tgccttcgca gttatgctgt gcggtgtgtt cctggcgtgg gtggttaaag
     6601 aaagcgtcgc aggtaatcgt accgtgcgca tctggggaaa atttgctctt ggtctcggcc
     6661 tgatgagcgc cgggttctgc attctgacct taagcgcccg ctggtccgca atgtatggtc
     6721 actcttctct gccactgatg gtattaggcc tggcggtgat gggctttgcg gaactgttta
     6781 tcgacccggt tgccatgtcg caaattacgc gcattgaaat ccccggtgtg accggcgtat
     6841 taaccggcat ttatatgctg ctttccggcg cgattgcgaa ctatctcgcg ggcgtgattg
     6901 ccgatcagac atcgcaggct tcgtttgatg cttccggggc gatcaactac tccatcaatg
     6961 catatattga agtatttgat caaattacct ggggcgcact ggcgtgtgta ggactggtac
     7021 tgatgatttg gctgtatcag gcgctgaaat tcagaaaccg cgcgctggcg ctggagtcat
     7081 aataggccag caccatacct gataaaacgc tcgctgcgtt ttatcaggct cctttcctcg
     7141 cttcttcgta cgctgccagc gttcgcagcc ttgcctcttt gtgatcaact atcggttgcg
     7201 gataatccag catcacacct gctttctgcg cccacttcca cggctcatgc accgctttcc
     7261 ctggtacatc gcgcagctcc ggtaaccatc gacgaataaa ctcgccctca cggtcaaatt
     7321 tctcgccctg ggttgtcggg ttgaaaatac gaaaatacgg cgctgcatcg gttccggttg
     7381 aagcggccca ctgccagcca ccgttattgg ctgccaaatc accatcaatc agctgcgaca
     7441 tgaaatatcg ctcgccttcg cgccagtcga tcaacaaatc tttcaccaga aaactggctg
     7501 taatcatccg tagccggtta tgcatccagc cagtgctgtt aagctgacgc atggcagcat
     7561 cgacaatcgg gtatcccgtt ttgccttcct gccaggcctg taaatgtgcg ggattgctct
     7621 gccactgcac acgatccgtc caggcaataa acggacaatg tttacacaac gaggggtaat
     7681 acgtcatcag atgacggtag aactcgcgcc agatcagctc actaagccag acactaccgg
     7741 ccccaccgtc cagcgcctgc ggctgttccg ccaacaagcg atgcaaacac tggcgaggcg
     7801 ataacccgcc cgttgccagg ctggcggaca aacgactggt gccttccact gccggaaaat
     7861 ctcgttgttg ctcatattct ccggcaccgt tctggcaaaa ctggcgtaat tgcgcaatcg
     7921 ccgctttttc ttccaccggg aaatgcgcag tatcgaaaga ctgacgagga taattcagcg
     7981 taatggatgg cgagggctct atcgatccgc tactacgaac ttttggcgca gcgacgcact
     8041 ccggcatccc ttcccgcagc cgtttcagcc aggcattctt aaaaggcgta aagactttgt
     8101 acatctcgtg attaccggtc atcaccgcgc caggcggcag gatcacgctg tcatcaaatc
     8161 cttcacacac cacgttacgc agcgctcttt caacttccac atcccgcgcc cgctcattca
     8221 cttcatactg atagttataa aacaggtggg taacgctgtt ttccgcgcac acctgtttaa
     8281 ctatttcgac actggcgaca aagtcatcca cttcacggaa caataaagga ataccttttt
     8341 ccgcaagcgc tatttgtagc ccattcagtt gagcattgat aagttcagcc tgacgcggcg
     8401 acatgttatg cgtcgcccac tggcgtggtg tagcgatata caacgccagc acgcgtgcag
     8461 acgaattgct gcaggcggca gccagtgcga gattatcgtg caaacgtaaa tcctggcgaa
     8521 accagaccag atgggtagtc ataaaactcc tgaatggcgc aagttaatca cacgcggcca
     8581 aagttcgaaa taacgctgcc ctgaaagcca ggcgtcagga taaagcgcca tatagtgttt
     8641 gatacgcatc agcggcgcaa gaagtggttg ctcgccacgg cgataactgt cgataagcgc
     8701 agccagctgc tggcgttctg tggaatcaat atgcgggcga aaataaccct gaacgtgcat
     8761 caaaacattg gtgtgatcgc gcgggttggc ggggtgagaa agcaaaacaa ctacgcgttg
     8821 gcggtactgg ttgtaatagt catccagatt ttgccactgg tgaatatcag ccacgaacgg
     8881 gccaagtttg cggtactccg gctgagaatg cgccagaaag acgagtttat agcggctgtg
     8941 ataatcgaga agcgccccgc gcgttaagcc atgttctttc agtcggtgta actcatgaag
     9001 ggcaaagata cggattaggg tgctgtcatc aaatcgttgt agattcatta ctgctcctga
     9061 acggtataaa ggagtaagtg tagacgatgg taaatgaatt ttatggggca gagtttttgc
     9121 ggggaagtat tttgttggta aaaatattat caacttcatc tgagcgagaa ttattctact
     9181 atttcccgag ctgcattcat tttttgtatt ttttattttt agaaaataac agttctcaaa
     9241 gcttaattac ctcactatta attgtatttc aaactaacaa tcgcactcca ttttctctct
     9301 ttaaaaaaca taaacactgt taaaacaaat atttatttcg ttatcttaaa tgctatttct
     9361 acatcactcg tccttataat caaattattc ttattcatag ctatttttgc aggtttaaaa
     9421 tagcggcttt caccaaagtc agccatgaaa attagactac aagttctccc agcctttgca
     9481 catgagaaaa accacccatc aactctattt attcctgaac ctttaacacc ataataaatc
     9541 agaatttctg ggtattgttc atccttcacg ttttcatatt tttggtattt aattgaaaac
     9601 caagagtcta tactgccaac atcttcaaaa aatattggag ctgatgtttc cgcatgaaca
     9661 tatgcagaaa atgctaacaa aatggcaata cttagtttgg taaaaatatc gttccacact
     9721 tttcaggata atctattggg gggaagggat cttttcctct aaatctaatt gctcccactc
     9781 cttgtttgtc agaccattcg ccatttgcat cctgacgata ccagtgataa tcccctccca
     9841 tgcctataaa attgtgagga cgaataaaca attgagcttt atggtaacca gatggacaac
     9901 tcccattatc taaatccttg gcaccatcat tttttgacgc ttcaaaaata ctaccgcaag
     9961 tgagtttaga aaactctttt ccagataatt ctccaggttg taatcctccg ccgccaaaaa
    10021 tcctactccc agggtttcca tacctattta gagcatatga ataacaatta tttacggcaa
    10081 gataatacgg atctgaattt aggtctcgat tgaatactgg agcaggttta tcaattaagc
    10141 ccagcg
//
LOCUS       DADMIB010000157        10115 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.159, whole genome shotgun sequence.
ACCESSION   DADMIB010000157 DADMIB010000000
VERSION     DADMIB010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10115
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.159"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            203..355
                     /gene="hokA"
                     /locus_tag="JNZ89_003539"
     CDS             203..355
                     /gene="hokA"
                     /locus_tag="JNZ89_003539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokA"
                     /protein_id="HAY8937283.1"
                     /translation="MPQKYGLLSLIVICFTLLFFTWMVRDSLCELHIKQGRYELAAFL
                     ACNLKE"
     gene            complement(543..755)
                     /gene="cspA"
                     /locus_tag="JNZ89_003540"
     CDS             complement(543..755)
                     /gene="cspA"
                     /locus_tag="JNZ89_003540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone/antiterminator CspA"
                     /protein_id="HAY8937284.1"
                     /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
                     LDEGQKVSFTIESGAKGPAAGNVTSL"
     gene            complement(1036..1326)
                     /locus_tag="JNZ89_003541"
     CDS             complement(1036..1326)
                     /locus_tag="JNZ89_003541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator"
                     /protein_id="HAY8937285.1"
                     /translation="MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKG
                     TGLKIDDFARVLGISVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME"
     gene            1759..2469
                     /locus_tag="JNZ89_003542"
     CDS             1759..2469
                     /locus_tag="JNZ89_003542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3053 domain-containing protein"
                     /protein_id="HAY8937286.1"
                     /translation="MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNT
                     VMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
                     DYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTP
                     ADALQPLIPVAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLP
                     AQHQAFNQAWTTAVTATQ"
     gene            complement(2519..3493)
                     /gene="ghrB"
                     /locus_tag="JNZ89_003543"
     CDS             complement(2519..3493)
                     /gene="ghrB"
                     /locus_tag="JNZ89_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312465.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrB"
                     /protein_id="HAY8937287.1"
                     /translation="MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFA
                     EAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTET
                     VADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMAL
                     AQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLF
                     GAEQFAKMKPSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLS
                     MANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD"
     gene            complement(3597..4256)
                     /locus_tag="JNZ89_003544"
     CDS             complement(3597..4256)
                     /locus_tag="JNZ89_003544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HAY8937288.1"
                     /translation="MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLDSL
                     VGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
                     GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL
                     NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP
                     L"
     gene            4409..6742
                     /locus_tag="JNZ89_003545"
     CDS             4409..6742
                     /locus_tag="JNZ89_003545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HAY8937289.1"
                     /translation="MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQ
                     SAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVHVSWDEALDLIHQQHKRIR
                     EAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV
                     GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKL
                     ICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYA
                     VFASYLLGESDGIAKTAEWAAGICGVHAAKIRELAALFHQNTTMLMAGWGMQRQQLGE
                     QKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRCSAVLSSMQGSLPGGSDAVDK
                     IPVARIVEALENPGCAYQHNGMNRLFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPEL
                     VVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDF
                     DVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQL
                     IEMPENPDSERFIRFADFCRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLEP
                     DEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDALARGIQD
                     GDTVRLWNARGQILAGVVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDL
                     PSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS"
     gene            complement(6711..7151)
                     /locus_tag="JNZ89_003546"
     CDS             complement(6711..7151)
                     /locus_tag="JNZ89_003546"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY8937290.1"
                     /translation="MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAY
                     LANAQNWVWEEDSKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLML
                     EVYQKNQPAINFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL"
     gene            complement(7148..7711)
                     /gene="tag"
                     /locus_tag="JNZ89_003547"
     CDS             complement(7148..7711)
                     /gene="tag"
                     /locus_tag="JNZ89_003547"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HAY8937291.1"
                     /translation="MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGL
                     SWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAY
                     LQMEQNGEPFADFVWSFVNHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTT
                     ICYSFMQACGLVNDHVVGCCCYPGNKP"
     gene            7869..8567
                     /locus_tag="JNZ89_003548"
     CDS             7869..8567
                     /locus_tag="JNZ89_003548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY8937292.1"
                     /translation="MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHS
                     TERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQ
                     VTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSSLGWRVDSRLGDLRPWAQI
                     SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTN
                     NSDYLYTMGVSARF"
     gene            8795..9997
                     /locus_tag="JNZ89_003549"
     CDS             8795..9997
                     /locus_tag="JNZ89_003549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8937293.1"
                     /translation="MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAP
                     VSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMML
                     WLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE
                     TVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWM
                     LAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK
                     IARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFG
                     LNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQ
                     KMLREAHI"
BASE COUNT         2427 a         2435 c         2591 g         2662 t
ORIGIN      
        1 ttttaggatt atatcaagga gaagaaacaa acttattaag ctagaatagc tacgggtgct
       61 tgagactgtt tgtctcaggt attcaccgaa aggcagacag agaaaagccc cacctgacta
      121 taaatcaaag tgaggctacc ctatgcctga acaccataag gttagcctct tactcgttgg
      181 aaatcaacac agggggctgg gaatgccgca aaaatacgga ttactttcat taatagtgat
      241 ttgtttcacg cttttatttt tcacctggat ggtaagagat tcactgtgtg aattgcatat
      301 taaacagggg cgttatgagc tggcggcatt tttagcctgc aatttaaaag agtaagagtc
      361 ttcggcggga aattattccc gcctttctta cggcgttgcg cattctcatt gcacccacat
      421 ttattcttca caaaaataat aatagatttt actacgcgat cgattattta tttcctgaaa
      481 aaaaataaaa aaaatccccg ccaaatggca gggatcttag attctgtgct tttaagcaga
      541 gattacaggc tggttacgtt accagctgcc gggcctttag cgccgctttc gatggtgaag
      601 gacactttct gaccttcgtc cagagatttg taaccatcgt tctggatagc agagaagtgt
      661 acgaacacat ctttagagcc atcgtcagga gtgatgaagc cgaagccttt gtcagcgttg
      721 aaccatttta cgataccagt cattttaccg gacatagtgt attaccttta ataattaagt
      781 gtgcctttcg gcgatatggc gtgctttaca gattttgaag cgttaaagga atgtgcacta
      841 cgaggggtat caacgataac tcttgaaggg acttgcctta ctacactgct ttaatggtct
      901 gtacgtcaaa ccgttgatgt gcattaagcc acgcattggc gggtgatgca acaattattt
      961 ttcatattta tgattaatcg gttggaaaac ggtcctgtca tcaggaccgt aaacagcaat
     1021 aaagtggata aaagtctatt ccatcaactg cttacttaat gccgggttgg cttgaatcaa
     1081 acgcatcaat tttagttcgg cacttgaagg cttcacgcgt ctggattccc attcctttac
     1141 catggcgact gatatgccca aaacccgggc gaaatcatcg atttttaacc ctgtcccttt
     1201 tcgtaactgc tcaatttcgg tacaggacgt tgttctgtgc gtcagggtaa ttttctgcgt
     1261 ttcatcttta aaaacaatct gttccaggct gctcaacagc tcatgcattg gatctttata
     1321 ttccattgaa aactcctcaa atcacactgc gggatcgtga attgcatcga agctcattaa
     1381 gaatagtcgg gaaaagcaga cacagcgggg tgaagtcagg gcatgctctg gctatgattc
     1441 gattcagcca gtcatttagc gtgacttata gccacctaac gatctgataa atgccgatat
     1501 atctcttacc actcctgttt tgtaaagatt tcgaaaatct aaagttctgc gaaggcgtaa
     1561 atctcgggct acaaaaaagc aacggcaata tcatttttta acaatgaaac aacaaattaa
     1621 ccttgtttca ttttctccat gattttacca ggaagattac gtagaaaggg tatcctgcaa
     1681 gcctgtcctg gactatcctt gtcacgtcag acacgcgtgt gtcgttgtgc gctttttttg
     1741 ggtgaaagga gtaagaaaat ggcgacagga aagtcctgct ctcgctggtt tgcgcctctt
     1801 gcggcgttat taatggtagt tagcctgagt gggtgttttg ataaagaagg cgatcagcgt
     1861 aaagcgttta tcgacttcct gcagaataca gtgatgcgta gcggtgaacg tctaccaacc
     1921 ctgactgccg atcagaaaaa acagtttggt ccttttgtct ctgattacgc gattctgtat
     1981 ggttattctc agcaggtgaa tcaggcgatg gattccggtc tgcgcccggt cgtagacagc
     2041 gttaacgcaa ttcgcgtacc gcaggattac gttacgcaaa gcggtccgct gcgtgaaatg
     2101 aacggttcgc tgggtgtgct ggcgcaacaa ctgcaaaatg cgaagttgca ggccgatgct
     2161 gcgcactctg cgctaaaaca gaccgatgat ttgaaaccgg tctttgatca ggcattcacc
     2221 aaagtggtaa cgacgccagc tgatgcattg caaccgttga ttccggttgc acaaactttc
     2281 acgcaacaac tggtgatggt tggagactac attgctcaac aaggtactca ggtgagcttt
     2341 gtagcaaatg gtatccagtt cccgacttcg cagcaggcaa gtgaatataa caaactgatt
     2401 gcgccgttac cggcacaaca tcaggcgttt aatcaggcct ggactacagc agttactgca
     2461 acccaataaa gagtaaaagc ccgagcgatt atcgggcttt acttcacgca gtcgcggctt
     2521 agtccgcgac gtgcggattc acacagttct tctcaacctt tccttgtaac gcatcaatca
     2581 aattatccac ggcacaggcg gccatgccat aacgcgtctc atgggtggca gatccaatat
     2641 gcggtactgc gacgacgttg gccattgaga gcaacggcga atctacggac agtggctctt
     2701 gttcgaagac atccagcccg gcggcgtgaa tttcgccttt ctgcaatgct gcgatcagtg
     2761 cattttcgtc aaccaccggg ccacgtccgg cattaatgaa aatggcggag ggtttcattt
     2821 tggcgaattg ttctgcgcca aacagatgat gcgtctcatc agttaacggc aggatcaggc
     2881 aaacgaaatc tgactcttgt aacagagtat ccaaatcgca gtagcgggcg ttgaagcgtt
     2941 cttctgcttc tttatggtgg cggcgcgcgt tatagaggat gggcatgttg aagccaaagt
     3001 gcgcacgttg tgccagcgcc atgccgatcc gtcccatccc gacaatgccc agtgttttat
     3061 ggtgaacgtc agtgccgtac cagtccgggc ctatgctcgc ggtccattcg cctgctttta
     3121 cccgttctgc tacctccaca acccgacgag cggtagacaa caccagcgcc atcagcgtat
     3181 cggcgacggt ttctgttaat acggttggcg tgtgcatcag cagaattttt cgggcggtaa
     3241 gcgcatcgac atcaaaattg tcatagccga cggagatcgt tgatgtggca cgcagtttcg
     3301 gcattttttc cagcaatgcg gcatctacat tctcgtttga acccagtaaa ccttcagctt
     3361 cggcaaaaat tgctgcattt tgttcgacgg tttgtgggct gaggtttgcc acctggtgaa
     3421 cggtgaaatg ctcttgcagg cgttgcagta aatcatcagg taaggctttg tagaggataa
     3481 cggacggctt catgcttctc tccattcact gataaggcgc tcaccttagc ctgaaatatg
     3541 atgaaggaaa actgaagaat gccaggtgat ttctgcatca cctggcatga aagggattac
     3601 agcgggctta aggtaatttc tacacggcgg ttttgcgcct taccttctgc ggtgctgttg
     3661 ctggcgattg ggttagccgg gccaaggccc tgagtacgga tgcggctggc gtccacgccc
     3721 tgggtgatca acgcgctggc aacggaatcc gcacgctgct gggagagacg catgttcagg
     3781 tcgtgacccc ccgtgctgtc ggtataacca atcacgttaa ccgccgtttt cggatactct
     3841 ttcagcacca ttgccacgcc ggtcagggtg ttagcgcctg ccggtttcag ggtcgcgctg
     3901 ctgctgtcga aggtcacatt gttcggcata ttgaggataa tgttatcccc gctgcgggtt
     3961 acgctaacac cagtgccgcg cattttgtca cgcagcttcg cttcctgcac atccatgtaa
     4021 taacccacgc cgccgcccag agctgcgcct gctgctgcgc caatcagcgc gcctttaccg
     4081 cgatctttct tcgaagaaga gagcgcacca atacccgcgc ccacgagaga gtccagacct
     4141 gcgccgatag cagatttgcc tgcttcgcgt tcgccggtgt aagggttagt tgtgcagcca
     4201 gataccgcca gagcgccact cactacggcg gcaataagat aaacacgttt cttcattgtt
     4261 aatccttaat aaccttttta ttctttgcca cgggttccgt ggcgggagat tatgccgcgt
     4321 gaacatgaag attattcctg ggaatactcg gaaatttgta agtaatattt aactgctcaa
     4381 tacatctaac ctttcaggag tcttcggttt ggccaactca tcctcacgat attccgttct
     4441 gactgccgcc cactgggggc ccatgctggt tgaaaccgac ggcgaaaccg tgtttagctc
     4501 gcgtggcgcg ttagccacag gaatggaaaa ctccttgcag agcgcggttc gcgaccaggt
     4561 tcacagcaat acgcgggtac gatttccaat ggtgcgcaaa ggctttctcg cgtcaccgga
     4621 aaacccgcaa ggcattcgtg ggcaggatga atttgttcac gtgagttggg atgaggcgct
     4681 ggatcttatt caccaacaac ataaacgcat tcgtgaggct tatggtccgg catcgatttt
     4741 tgctggttcc tacggctggc gttcaaacgg cgtgctgcat aaggcctcga cattattaca
     4801 acgctatatg gcgctggcag gcggttatac cgggcatctg ggggattatt cgaccggtgc
     4861 ggcacaggcg atcatgccgt atgtcgtggg tggcagcgaa gtttatcaac agcaaaccag
     4921 ttggccgctg gtgctggaac atagcgatgt cgtggtgttg tggagtgcta acccactcaa
     4981 tacgctgaaa attgcgtgga atgcatctga tgagcagggg ctttcttact tttccgcact
     5041 gcgtgacagc gggaaaaagc tgatctgtat tgatccaatg cgatcggaaa ccgtcgattt
     5101 ctttggcgat aaaatggagt gggtggcacc gcacatgggc accgatgttg cgctgatgct
     5161 ggggatcgcc catacgctgg tggaaaatgg ttggcacgac gaagcgtttc tggcgcgttg
     5221 caccacaggt tatgccgtct tcgcctctta tttgctgggc gagagtgacg gaatagccaa
     5281 aaccgccgaa tgggcggcag ggatttgtgg ggttcacgca gcgaaaattc gcgagttggc
     5341 ggctcttttc caccaaaaca cgaccatgct gatggctggc tggggaatgc agcgccaaca
     5401 gcttggtgag caaaaacact ggatgatcgt cacgctggcg gcaatgttgg ggcaaatcgg
     5461 cacacccggc ggcggttttg gtctttctta tcattttgcc aatggtggta atcccacgcg
     5521 gtgttctgcg gtgctctctt ccatgcaggg tagcttgccg ggtggcagcg atgcggtaga
     5581 taaaatccct gttgcccgta ttgttgaagc actggaaaac cctggctgcg cataccaaca
     5641 caatggcatg aatcgcctct tcccggatat tcgctttatc tggtgggcgg gtggcgccaa
     5701 cttcacccat catcaggaca ctaatcgcct gatacgagct tggcaaaaac cggagctggt
     5761 agttatctcc gaatgcttct ggacggcggc ggcaaaacac gcggatatcg ttctgcctgc
     5821 gactacctct tttgagcgta atgatctcac catgaccggc gattacagta atcagcatct
     5881 ggtgccgatg aagcaagtgg tgccgccacg ctatgaagcg cgtaatgatt ttgatgtttt
     5941 tgccgagtta agtgaacgct gggagaaggg cggttatgca cgttttacgg aaggaaaaag
     6001 tgagttgcaa tggctggaaa cgttttataa cgttgcccga cagcgcgggg caagccagca
     6061 ggttgaattg ccgccatttg ctgagttctg gcaagccaat cagttaattg agatgccgga
     6121 aaacccggac agcgagcggt ttattcgctt cgctgatttt tgccgcgatc cgcaggcgca
     6181 tccattaaaa accgccagcg gtaagattga aatcttctcg cagcgtattg ccgattacgc
     6241 ttatccggat tgcccggggc atccaatgtg gctggagccg gacgaatggc agggcaatgc
     6301 cgaaccggaa cagttacagg tactttctgc tcatccggcg catcgtctgc acagccagct
     6361 gaattacagt tctctgcgcg aattgtatgc ggtggcaaat cgtgagcctg tcaccattca
     6421 tcctgacgat gccctggcgc gcggcattca agatggcgat actgttcggc tgtggaacgc
     6481 acgcgggcaa attcttgccg gagtggtcat tagcgaggga attaaacctg gcgtgatttg
     6541 tattcacgaa ggggcatggc cggatttgga tttaaccgct gacggtattt gtaaaaacgg
     6601 cgcagtcaac gtgctgacca aagatctccc cagctcgcgg ctggggaatg gctgtgcggg
     6661 taatacggcg ctggcatggc tggaaaaata caacggtccg gaactgacac ttacagcgtt
     6721 tgaaccaccg gccagctcat aatccaggtg ggtagttggg tttcatcctg ccatgcgcaa
     6781 tcgacaatgt gaaaaccctg cgcctggtaa aaatttatcg ccggttgatt tttttgataa
     6841 acctccagca tcaggtgggg atggcgctgc tgcacatatt gcatcagcgc cttaccaata
     6901 ccgcgcctga cggccttcgg tgcgacaaac atcgctgcca gaaatcggcc ttccataatg
     6961 ctgacaaaac cgagaagctt actgtcttct tcccagaccc agttttgcgc attggcaaga
     7021 tacgcatccc gcaccagcgg aatgcaatca cgccagtaat tcgcttttat aaagggatgt
     7081 ccccaggttg tactttccag ccacagttcg aggatcgcgg ggagttctga acgttgcgct
     7141 tcccgaatca tggtttattt cccggatagc aacagcagcc aaccacatga tcattcacca
     7201 gcccacatgc ctgcataaag gagtaacaga ttgtggtacc gacaaactta aaaccacgtt
     7261 ttttcagtgc tttagatagg gcgtcggagg cgggcgtaga tgtggggatt tcgctcaacg
     7321 ttgtggcttg tgtcacctgt ggctgatgat ttacaaacga ccagacaaag tcggcaaacg
     7381 gttcgccgtt ctgttccatt tgcaggtacg cccgcgcatt accaataatt gcctgaattt
     7441 tcccgcgatg gcggataatc ccggcgtcct gtaccagtct ttcgacatcc tcttcctgca
     7501 ttgctgcgac cttcaccgga tcgaactgat gaaagcaggc gcgatagttt tcgcgttttt
     7561 tgaggacggt gatccacgat aacccagcct gctgcccttc aaggcagatc atttcgaaca
     7621 gttttttact gtcagtttca ggcacgcccc actcattatc atggtaggca atataaagcg
     7681 ggtcctgact cacccagccg caacgttcca tactttccct cgctatgtac ccgatcgtaa
     7741 aaatttcagc cgcttttctt gacgcatcgg tgaaaaagtc aatatttaat acagggctac
     7801 tatgcccgat atccttcata caatgacaat aatattgccg aattcggctc ttccctggag
     7861 tcgtgttaat gatcataaaa aaaagcggtg gtcgctggca gctaagcctg ctggcgagcg
     7921 tggtaatcag cgcctttttt ctcaacacag cttacgcctg gcaacaagaa tatatcgttg
     7981 atacgcaacc cggacattcc acagagcgtt acacctggga tagtgatcat caacctgatt
     8041 acaacgatat tttgtcgcaa cgtattcaaa gtagccaaag ggcgctggga ctggaagtca
     8101 atctggcgga agaaactcct gtggatgtga ccagcagtat gagtatgggc tggaattttc
     8161 ctttatatga acaggttaca accggcccgg tcgcggcatt acattacgat ggcacaacca
     8221 cctcgatgta taacgagttt ggcgacagta ctaccacgct gaccgatccg ttatggcatg
     8281 ccagcgtgag tagcttaggc tggcgtgttg actcccggct tggcgatctc cgaccctggg
     8341 cgcaaatcag ctataaccag caatttggcg agaatatctg gaaggcgcaa tcaggcctga
     8401 gccggatgac ggcgacaaac cagaacggca actggctgga tgtcaccgta ggcgctgata
     8461 tgttgctcaa tcaaaatatt gccgcctatg ccgcgctaac tcaggcagaa aataccacta
     8521 ataatagcga ctatctgtat acgatggggg ttagcgccag attttaacgt aacagtcaca
     8581 attgaaacca ttgaataaca atagttgtgg tgatagtggg tgctaactta caaataataa
     8641 atttggtgaa taattgtcgc gtcattcatt cctgaactaa ggcatttcat tccgttctga
     8701 tggcatttca tgccgttttt ccccaggcat aaaatgcact tcgttatggt tgtcggcaga
     8761 gatttttcct ttttattact gcaggaatac tgccatgaca ccttcaaatt atcagcgtac
     8821 ccgctggctg acactcatcg gtactatcat tacccagttt gcgctggggt cggtttatac
     8881 ctggagcctg tttaatggcg cgctttctgc caagctggat gcgccggtaa gccaggtcgc
     8941 tttctctttc ggcttgttaa gtctggggct ggcaatttca tcttctgttg cggggaaatt
     9001 acaggaacgt tttggcgtta aacgcgtcac tatggcttcc ggcattttgc taggattagg
     9061 cttcttcctg acagcgcatt ctgacaacct gatgatgctg tggttaagcg ccggtgtgct
     9121 ggtcggtctg gcggatggcg cgggttacct gctgacgctc tctaactgcg tgaagtggtt
     9181 cccggagcgt aaaggtctga tctccgcgtt cgctatcggt tcttatggtc ttggtagcct
     9241 gggtttcaaa tttatcgaca cgcagctgct ggaaacggtg ggtctggaaa aaacatttgt
     9301 gatttgggga gcgattgcgc tggtgatgat tgttttcggc gcaacgttaa tgaaagacgc
     9361 accaaaacag gaagtgaaaa ccagcaatgg tgtggtggag aaagattaca cgctggcaga
     9421 gtcgatgcgt aaaccgcagt actggatgtt agcggtaatg ttcctgactg cctgcatgag
     9481 cggcctgtac gtgattgggg tagcgaaaga tatcgcccaa agtctggcac accttgatgt
     9541 ggtttccgca gccaatgcag taacggttat ttccatcgct aacctttcag gtcgtctggt
     9601 gctgggcatt ctgtctgaca aaattgcccg tatccgtgtt atcaccattg gtcaggtgat
     9661 ttcgctggtg ggtatggcgg ccctgctgtt tgcaccatta aatgcagtga cgttctttgc
     9721 agcgattgcc tgcgtggcat ttaactttgg cggcactatt accgtctttc catcactggt
     9781 cagtgagttc ttcggcctca ataacctggc gaaaaactac ggtgtgattt acctcggttt
     9841 cggtatcggt agcatttttg gttcgattat cgcctcactg tttggcggtt tctatgtgac
     9901 cttctacgtg attttcgccc tgctgattct gtcattggcg ctttctacga cgattcgtca
     9961 gccagagcag aaaatgttgc gtgaggcgca tatttagaaa tatgttgcta ctgaaataaa
    10021 tacgaggagg gagacttcaa agtctccctt ttttatggac gcatattaaa agaacaataa
    10081 tattcatacc acaaatatat tttatttata tatta
//
LOCUS       DADMIB010000158        10058 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.160, whole genome shotgun sequence.
ACCESSION   DADMIB010000158 DADMIB010000000
VERSION     DADMIB010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10058
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.160"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..206
                     /locus_tag="JNZ89_003550"
     CDS             <1..206
                     /locus_tag="JNZ89_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937294.1"
                     /translation="STLKSPSYTKSVSWQHYRHICCYRRKLTDAELEACYRYDKQFWE
                     HYSKKCRWPIRNVPWGASSVKYS"
     gene            complement(323..1666)
                     /gene="gdhA"
                     /locus_tag="JNZ89_003551"
     CDS             complement(323..1666)
                     /gene="gdhA"
                     /locus_tag="JNZ89_003551"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013366584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HAY8937295.1"
                     /translation="MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPK
                     YRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVN
                     LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSESEVMRFCQALMTELYRHLGA
                     DTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYF
                     TEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTK
                     EKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVGAAHQ
                     LIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLG
                     WKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI"
     gene            1902..2174
                     /locus_tag="JNZ89_003552"
     CDS             1902..2174
                     /locus_tag="JNZ89_003552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnjH family protein"
                     /protein_id="HAY8937296.1"
                     /translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP
                     CTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLLWRRVKP"
     gene            complement(2140..2547)
                     /gene="nudG"
                     /locus_tag="JNZ89_003553"
     CDS             complement(2140..2547)
                     /gene="nudG"
                     /locus_tag="JNZ89_003553"
                     /EC_number="3.6.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP pyrophosphohydrolase"
                     /protein_id="HAY8937297.1"
                     /translation="MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVELDES
                     QQQALVRELNEELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALV
                     WCSPEEALQYPLAPTDIPLLEAFMALRAARAAD"
     gene            2634..3245
                     /locus_tag="JNZ89_003554"
     CDS             2634..3245
                     /locus_tag="JNZ89_003554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416272.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HAY8937298.1"
                     /translation="MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALP
                     FLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFIL
                     AAPEQNALAGGWLLFAFISTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
                     ILLFVLGCLFPAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ"
     gene            complement(3254..4561)
                     /locus_tag="JNZ89_003555"
     CDS             complement(3254..4561)
                     /locus_tag="JNZ89_003555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HAY8937299.1"
                     /translation="MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAID
                     TRPSAFYNGWPQTLNGPSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADAPVALY
                     GNDKDVDAVKTRLQKAGFTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEV
                     TAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH
                     GIRHDTTVILYGRDVYAGARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV
                     KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGE
                     IAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRAS
                     ETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSSK"
     gene            complement(4628..5281)
                     /locus_tag="JNZ89_003556"
     CDS             complement(4628..5281)
                     /locus_tag="JNZ89_003556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY8937300.1"
                     /translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF
                     SWMIGALAGQFSCTGELWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALP
                     STLKGTARRNAVKDALDRAGLAETYHQDPATLSGGQRARVALLRALLAQPKALLLDEP
                     FSRLDVALRDNFRQWVFSEVRELAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR"
     gene            complement(5281..6816)
                     /locus_tag="JNZ89_003557"
     CDS             complement(5281..6816)
                     /locus_tag="JNZ89_003557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8937301.1"
                     /translation="MVTPLRYALIFLLWAMVAVIYAPLIPAALTLISPALSLTHWQAL
                     FADPQLPHALLATLVSTTIAAVGALLIALLVIVALWPGPKWQRMCARLPWLLAIPHVA
                     FATSALLLFADGGLLYDYFPYFTPPMDRFGIGLGLTLAVKESAFLLWILAAVLSEKRL
                     LQQVIVLDSLGYSRWQCLNWLLLPSVAPSLAMAMLAIVAWSLSVVDVAIILGPGNPPT
                     LAVISWQWLTQGDADQQTKGALASLLLMLLLAAYVLLSYLLWRSWRRTIPRVDGIRKP
                     ATPLLPGTTLASFLPLTGVLCVVLLAILADQSTINSEALINSLTMGLVATFIALLLLL
                     LWLEWGPQRRQLWLWLPILLPALPLVAGQYTLALWLNLDGSWTAVVWGHLLWVMPWML
                     FILQPAWQRIDSRLILIAQTLGWSRAKIFFYVKCTLMLRPVLIAFAVGFSVSIAQYMP
                     TLWLGAGRFPTLTTEAVALSSGGSNGILAAQALWQLLLPLIIFALTALAAKWVGYVRQ
                     GLR"
     gene            complement(6789..7955)
                     /locus_tag="JNZ89_003558"
     CDS             complement(6789..7955)
                     /locus_tag="JNZ89_003558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY8937302.1"
                     /translation="MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDT
                     AINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGE
                     NFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
                     VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDA
                     TFARVTAPLWQYLDALHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKI
                     ASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPVV
                     WDDPSVLDPQKLPDGQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH"
     gene            complement(7965..8513)
                     /locus_tag="JNZ89_003559"
     CDS             complement(7965..8513)
                     /locus_tag="JNZ89_003559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HAY8937303.1"
                     /translation="MGLPPLSKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLV
                     SMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVAD
                     WRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLS
                     ARFNSAMDIPAQGLCRIPEKRS"
     gene            complement(8513..9220)
                     /locus_tag="JNZ89_003560"
     CDS             complement(8513..9220)
                     /locus_tag="JNZ89_003560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY8937304.1"
                     /translation="MMKMQSRKIWYYCITLIILLFAMLLAWALLPGVHEFINRSVAAF
                     AAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLS
                     WTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
                     DPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTV
                     VIFMAKKIWLERQKRND"
     gene            complement(9235..9912)
                     /gene="ydjY"
                     /locus_tag="JNZ89_003561"
                     /pseudo
     CDS             complement(9235..9912)
                     /gene="ydjY"
                     /locus_tag="JNZ89_003561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416265.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein YdjY"
     gene            complement(9917..>10058)
                     /locus_tag="JNZ89_003562"
     CDS             complement(9917..>10058)
                     /locus_tag="JNZ89_003562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY8937305.1"
                     /translation="RFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKN
                     EG"
BASE COUNT         2404 a         2742 c         2594 g         2318 t
ORIGIN      
        1 caagcacctt aaaatcacca tcatacacta aatcagtaag ttggcagcat taccggcata
       61 tctgctgcta tcgcagaaag ttaacggatg ctgaacttga agcgtgttat cgttacgaca
      121 agcagttttg ggagcactac agtaagaaat gccgttggcc cataagaaat gttccctggg
      181 gagcatcatc cgttaaatac tcataaacgc ctgaaatttt gccgggggcg ctgcgcttgc
      241 ccggcctaca ttagagcgta actgcaatga attgtgccca tttgtaggcc tgataagcgt
      301 agcgccatca ggcatttaca acttaaatca caccctgcgc cagcatcgca tcggcaacct
      361 tcacaaaacc ggcaatgttc gcgccctgca cgtagttggt ttgctcacct tcaccaccat
      421 gctcaacaca ggcatggtgg atatccagca tgatgtgatg caaacgtgcg tcaactttct
      481 cggctttcca gcccaggcgc gcagcgtttt gcgccatttc aaggcctgac gttgctacac
      541 cgccagcatt agccgcttta cccggtgcaa acagtacgcc tgcctgctgg aacagttcag
      601 tcgcttcgat ggtggtcggc atatttgccc cttcggcgac ggctttaacg ccattggcga
      661 taagctgatg cgcggcgcca acatccagtt cgttctgggt ggcgcaaggc agggcgatat
      721 caaccggtac agaccacggc tgttggcctt cgagatagac cagaccaaat tctttggcgt
      781 aatctgccac tcgaccatcg cggctggctt tgatttcgat aagacgtgcc agtttctctt
      841 tcgtgaatcc gctttcatca actacagtgc cgctggagtc tgacgcagtg atcacacgag
      901 caccaaattc catcgctttt tcgatagcgt actgggcgac gttgccggag ccagaaacgg
      961 aaacgcgcat cccttcaaaa cccataccgt ggcgttttaa cattgcttct gtgaaataaa
     1021 ccagaccgta gccggtagct tccgggcgaa taagactacc gccaaatgaa aggcccttac
     1081 cggtgaagac gcaggcggta ttgttggaga gctttttcat catccccgcc ataaagccga
     1141 cttcacgacc accaacgccg atatcacctg ccggaacgtc agtatccgcg cccagatgac
     1201 gataaagctc ggtcatcagc gcctggcaga aacgcatcac ttcgctttcg cttttacctt
     1261 tcgggtcaaa atcgctaccg cctttaccac cgcccatcgg cagggtagtc agggcatttt
     1321 tgaaggtttg ttcgaagccg aggaatttga gaatggagag gttaactgac ggatggaagc
     1381 gcataccgcc tttgtacggg ccgatggctg agctgaactg cacacgccat gcacggttga
     1441 cctgtacctg gttgcgatca tcaacccata ccacgcgaaa ctggatcacg cgctccggtt
     1501 caaccagacg ctccagtaat gacatctggc gatattttgg attttgttca agaaaaggcc
     1561 agagtgtggt cattacttca cgaacggctt gcgcgaactc ggtttgattc gggtcgcgct
     1621 tttggacatg gttgaggaat gactccagag aatatgtctg atccatagat ataaaaccct
     1681 tatatattaa tacgattgtg cttatgttgt ttatgtcatg tgcttttgca gttttcgact
     1741 ataccatcaa gaatgtgacg gtaagcaaga aaaaaatgac ccaggaaagc aaattaataa
     1801 cgagagtaat ctcataacca aatgcgataa ctcagacgct aaagttttgc cacccggcta
     1861 ccgttatcag ttgcagagac aataacgtta aggagttccc tgtgagtcga gcattgttcg
     1921 ccgtagtatt agcatttcca ttaattgcac tggctaaccc gcattatcgt ccggacgtgg
     1981 aggtaaacgt accgccagaa gtgttcagtt caggcgggca gtcagcgcag ccctgtactc
     2041 agtgctgcgt ttatcaggat caaaattatt ctgaaggggc ggtaattaaa gccgaaggaa
     2101 tactgctgca atgccagcgg gatgacaaaa cccttagcac taatccgctg ctctggcggc
     2161 gcgtaaagcc ataaacgcct ctaatagtgg aatgtcagta ggggccagcg gatattgcag
     2221 cgcctcttca ggtgagcacc agaccagcgc ctgatgttca tgtgcctgta acgtcccgtg
     2281 gaagtcgggt acgtgccagg catgaagatg gataatccgg cccgaaactt ctcgctgatg
     2341 gctggcaaca tactcaccca cagttgcttc gatgcccaat tcttcgttta actcacgcac
     2401 cagtgcctgc tgctggcttt catccagctc gactttacca ccggcaaact cccataatcc
     2461 cgcctgatcg ctctgggcgg ggcgttgcgc gagtaaaatt ttgccatcac gttcaatgat
     2521 ggcggcaaca acttcaatca ttttcataaa ttacacacgg gcagataagc gaaaaatgcc
     2581 ataatatccg cactgttgct caatcagaaa ggctttatat ttaaggagtg cctgtgctag
     2641 accgccatct tcatccccgg attaaaccgt tgttgcatca gtgcgtgcgg gttcttgata
     2701 aaccgggcat tacgccagat ggtttaacat tagtgggatt tgccatcggc gtgctggctc
     2761 tgccgtttct ggcgctgggc tggtatctgg cggcgctagt cgtcattttg ttgaacaggc
     2821 tgcttgatgg tctggacggt gcgctggcgc ggcgcagaga gcttaccgac gcgggcggct
     2881 ttcttgatat ttctctcgat tttctctttt acgcgctggt gccgtttggc tttattcttg
     2941 ctgcaccgga gcaaaatgcg ctggcaggcg gctggttgtt gtttgcgttt atcagcacgg
     3001 gcagcagttt tctcgccttt gctgcactgg cagcaaaaca tcagattgat aaccccggtt
     3061 atgcacataa gtcgttttac tatctggggg gattaaccga aggcacagaa acgatcttac
     3121 tgtttgtgct gggatgttta ttccctgcat ggtttgcgtg gatcttcggt gcgttgtgct
     3181 ggatgacgac ctttacgcgg gtgtggagtg ggtatctgac gctgaagtcg ctccagcgtc
     3241 agtaattgca atgttatttg ctactgtccg ggccgcgttc accggttgct accggatttt
     3301 ttggatcgct gctccattcg taccagccgc cgtcatacac ggaaacattc ttccaaccca
     3361 tggcgcgtgc gtacataaag gtttcggacg cgcgccagcc ggtgccgcag tagaatgaaa
     3421 cttgctgctc tggtttgata ttccacgctt tccacatagc ggtaatatca tcggcgctgc
     3481 gcatggtgcc atccgggtta tgaaaatctt ccatatgcgt cgagtcgcta ccagcgtgtc
     3541 cccaacgtgc tccggctatt tcaccttttg gtttaatata gctgtaaccg ctggtcgtac
     3601 cgataaattc tggccacgaa cgaatgctca ccagcgatgc atcctggcga tgcagcagtc
     3661 cacgggcctg ttccatatcg agcatcaact gcggttgtgc cgggatcttc acgccgaaat
     3721 ccggttccgc tttcactttc ggtggcgttc ctcgctcaac aggcagtccc gcgtcggacc
     3781 aggtttgcca gccgccatcc agcagacgca catctttcac gcctgcgtag agcataattt
     3841 gcgccacacg cgctccagcg tatacgtcac gcccgtacag aatgaccgtg gtgtcatggc
     3901 gaatgccgtg ttttgccagc atcgctttta gttgttcatc agaaactttg ttccacagcg
     3961 gttcgctttc cacttcgttg gtatcgatgt agtcagcacc gggaatatgg ctgataaggt
     4021 aaagcttagg agcgccccag gccgcttcaa tgactttcca gtcaccggca ggtttcgccg
     4081 taacctcttt accttgttgc aggtcgtgca gccattgcgg ataaaccagc tgctcaaagt
     4141 gcggcagttt ttgtagacgg gaaggttcgc ttagcgcgtc actcagaatg gagatatgcg
     4201 taaaacctgc tttttgcagt cgcgttttga cggcgtcgac atctttgtca ttaccgtaca
     4261 gcgccaccgg ggcatcggct ttcaggttat gttgcttgat ccacgcgttg agctgttcgg
     4321 tgctcatttt gtcgagccag ctggcagaga ggtttaaggc ggcaggttca tgaccagaag
     4381 ggccatttaa ggtttgtggc cagccgttat aaaacgcgct ggggcgagta tctatcgctt
     4441 tgccattttg ttgttgaagc tggtcaagtg taagaggctt cgccagttca gcggcccacg
     4501 aagaagcgca agccagccct aaagccattg ccagcgcggt catttgagaa acacgtttca
     4561 tcgaaaatcc cgacattgta gttttgagtg cgccattctg aactgacgca ttgagaaaaa
     4621 ctttgcgtta tcgcagtttg ttgtaatttt ctgaccactg cgccatatcc agaacagaac
     4681 tatcagcagg aacatcctgg agatcgtgcg ttacctgaac gacggggatc gccagttcgc
     4741 gaacttcgct gaacacccac tggcgaaaat tatcgcgcag agccacatca agacggctga
     4801 atggctcatc caggagtaac gcttttggct gagcgagaag ggcgcgcagc agggccaccc
     4861 gcgctcgctg accgcctgat aatgtcgcag ggtcctggtg ataagtttca gccagtcccg
     4921 ctcgatcaag cgcgtctttc acggcattgc gcctggcagt ccccttgagc gtcgacggta
     4981 gcgccagcag taaattttgc ccgacgctga actggtcaaa taacagtgca tcctggaaaa
     5041 gaatgccaat ctgacgctgt gcggtgggta gcatgtcaat ccgttgctca ttgagccata
     5101 gctcacctgt acaagaaaac tgtccagcca gtgcaccaat catccatgaa aacagagtgg
     5161 attttccaca gccagacggc cccattaacg tgacgatgtc acctttatca accgtaaagt
     5221 taacgtttgt cagcaagcgg ctttctggta aacgtagcga aacatttttc acgcagagca
     5281 ttagcggagt ccttgtctga cataacctac ccattttgcg gctaacgcgg tcagggcaaa
     5341 aataataagc ggtaacaaca gttgccataa agcctgggcg gcgagaatac cgttgctgcc
     5401 gccgctgctt aatgccaccg cctcagtggt gagcgtcgga aaacgccccg cgcccagcca
     5461 cagcgtcggc atatactgcg caatactgac tgaaaatccc accgcgaagg caatcagcac
     5521 agggcgcaac atgagtgtgc atttcacgta aaagaagatt ttggcccgcg accagcccag
     5581 tgtttgcgca atcaaaatta accgtgaatc aatgcgctgc caggcgggtt gcaggataaa
     5641 cagcatccac ggcattaccc acagcagatg cccccagacc accgccgtcc agcttccatc
     5701 caggttcagc catagcgcca gcgtgtactg gcccgccacc agtggcagag cgggcaatag
     5761 aatgggcaac catagccaca actggcgacg ctgtggcccc cattccagcc acagcagtaa
     5821 caggagcaaa gcgatgaatg ttgctaccag ccccattgtc agactgttga tgagtgcttc
     5881 actattgatc gtcgactgat ccgcgaggat cgccagcaga accacacaca gcacaccggt
     5941 taagggtaaa aaactcgcca gcgtagtgcc tggtaataaa ggtgtggcag gcttgcgaat
     6001 gccatctacg cggggaatag tgcgccgcca gctgcgccat agcagatagc tcagcaaaac
     6061 gtaggcggcg agtaacagca tcagcagcag actggcgagt gcgcctttcg tttgttgatc
     6121 cgcgtcgccc tgagttaacc actgccagct aattactgcc agcgtcggtg gattacctgg
     6181 cccaagaata atcgccacat ccacgaccga aagcgaccag gcaacaatcg ccagcatcgc
     6241 cattgccagc gaaggcgcga cggagggcaa cagcagccag ttcaggcatt gccagcggct
     6301 gtagcccagc gaatccagca caatgacctg ctgcaacagc cgtttttcgc tcaatactgc
     6361 cgctaagatc cacagcagaa atgcgctttc tttcactgca agggtgaggc ccagaccgat
     6421 gccaaatcgg tccattggcg gagtgaaata cgggaaatag tcatatagca gccctccgtc
     6481 agcaaagagc agcagggcgc tggtggcaaa agccacatgg ggaatggcga gcagccacgg
     6541 cagacgggcg cacatacgct gccatttcgg cccaggccat agcgccacaa tcaccagcag
     6601 ggcaatcaac aatgccccga ccgccgcgat ggttgtcgac accagcgttg ccagtaatgc
     6661 atgcggtaac tgtggatcgg caaataacgc ctgccagtgt gtcaacgaca acgcaggcga
     6721 tatcagcgtg agagctgccg ggatcagcgg tgcataaatc accgccacca tcgcccacag
     6781 caaaaagatt aatgcgtacc gtaacggcgt aaccattctt gttccagtgc attcacccat
     6841 cctgcgtgcg gttcagccag taccggcggc agatcctgcg gcattcttga ttgcaatatt
     6901 tcgcgctgcc cgtcaggcag tttttgcgga tcgagaacag aaggatcgtc ccagacaacg
     6961 ggatctgctt tacgcagttg cgcatcgggt gagagcagaa aattggcaac taccttcgcc
     7021 gcagcactgg cattcgcgtt ggctggaatg gtgacgaaat gcacgttgcc aatcatcccc
     7081 tcgcgaaagc caaaactgta actgcttgcc ggcaaatcgc cgctggcgat tttttgctgc
     7141 gcatgcgcgg ggttaaaggt cagcgacagg cgcaatgtgc cggctttcag cagagcatcc
     7201 atccgcgcgg gcgaaggcgg gaaatccttt ccttcgcgcc acaaatacgg atgcagtgca
     7261 tcaagatatt gccacaaggg cgcagtgaca cgggcgaaag tcgcatcgtc cggcgcttct
     7321 tttaatgcgg cgggatctgg cgtcagcata atcagcaact gttcaagaaa cgccgtgccg
     7381 gtaaagtccg gtgggcgcgg ataagtaacc gtgccgggat tggctttagc aaactccagt
     7441 aaggcttgcg gcgtttgtgg tggctgtggc gtaacatcgc ggcgggcgat aaacgtcagt
     7501 tgtgcgccgc cccagggcga ttccgcacct tgtgtcggca ctgaaaaatc ttcccgcacc
     7561 ggcagctgtg tgtcgacata gcgccagttg ggcagagtct ccgcccagcc cgtttgtaat
     7621 aaattggcct cttttaaggt gcggaagttt tcgccgttca cccagagcag atccaccgag
     7681 ccgcccgttt tacgaccggc agcagcttcg gtctgaatgc gcttcaccgc gtctgcggca
     7741 tccgcgagac gaacaatctt caggtttata gcgtaatggg ttttcatctc gccgctaacc
     7801 cagtcgagat agcggttaat tgcggtatcg ccgccccagg cgttaaacca gacggtttgc
     7861 cctttggcct catttttaat ttcctgccag tcactggcat gtgttgccaa agaaaacagc
     7921 gataacaatc ccagcaacca cccacaatgg cgcatcttct ctccttaaga acgtttttcc
     7981 ggaatacggc acagcccctg agcgggaatg tccatggcag aattaaaacg agccgacagg
     8041 ttttgcaggc cgatcaatgc cgtcagttcg gtgagcgcct gagcgtcaaa atgcgcagcc
     8101 agtcgggtac gcagggcatc atcgactgtt ggcggtgtga cgcttgcggc ttcggcgtac
     8161 tccagcgcca gccgttcttc atcgctaaag agcgggcttt gccgccagtc agccactgcc
     8221 agcagtttat cggtgctgcc ggtacgctcg gcgactttca tactggtgat atccacacaa
     8281 aactcacaca ggcacatttg cgcaatgcgc gcgctgacaa gcgatcgcac taccggatcg
     8341 agcggtgagc gtttgcgctc cagccaccca acaaacattg acaccaaata aaagataaac
     8401 gggatccgcc cccaccagcg aatcgggctt agcacctcgc cgtaatggcg acgatgcagc
     8461 cacgcctgcg gacgtaaaat gaaaggaatt ttgctaagcg gcggtaaacc catcagtcat
     8521 tcctcttctg gcgctcaagc catattttct tcgccataaa aatcaccacg gtcagggcaa
     8581 acagaataaa cagtccggtg acaaaccaga aagtaccgcc tgttaacatg ctgcccgccc
     8641 aggaataaac aatagtcgcc ggtaattgac caagcccggt ggcgataaaa aacgagcgaa
     8701 aacgtattga agtcagaccg gcagcatagc tgattggatc gaaagggaca aaaggcaata
     8761 accgacagac caggatggtg tgtttgccgt agcgagtgaa aaagccgtcc atactgtcaa
     8821 gcacggtttt gccggttaat ttttccacca cttcgcggcc catcactctg gcgataaaaa
     8881 agcacagcgc cgcgccggcc atcgaactgg tccacgacag caagccgccc cagaacgcgc
     8941 caaacagcga cgcattggca aaggtgatca aaaacgcagg tagcggtgca gcaatggcct
     9001 gtaaaatcat caacaagaac gagacaactg ccgccagtgc gccgtaagac tgaataaagc
     9061 gttctatacc ctgttggtcc acggcggcaa acgccgcaac gctgcgattg ataaactcat
     9121 ggacgccggg aagcagcgcc catgcgagca gcatagcgaa caacaggatg atgagggtta
     9181 tacagtagta ccagatttta cgcgattgca tcttcatcat cctttatcct ggctttattc
     9241 ggtgatttta aaggtaaccg ttgccagcgt gttatccgcc gggagaactg aggcattgcc
     9301 tttgaatttc acttcgccgc gtttttccac cgcaccataa gtgtatgttg cattgctgac
     9361 gatgccgacc gggcagctat ccagacacac cagtcaaccc gttttcttct cttctgctgc
     9421 cgttaaatta ccgccaaagc gcatgtccag tttcttgcca ttactgtcaa caatcacttc
     9481 atcgaaggaa tacgcttttg ccgccccttg ccagttgacc gaaatatcca gtttgctgcc
     9541 tgtgacatga gtcgtttctt tattatccat cgtcatgttt tcgcccggcg taccacctgc
     9601 ctctttcagg gcttcataaa atgctttcgg ggtcgcataa gccataaaca gcgatttatg
     9661 tccgttggag ccatctttaa acacaatacc gtgacgagtg tcgtcggtga ggaaacgacc
     9721 attaatttgc accagcatgg ttaccgtatg gttattggca tcgacgcgca gcggttggct
     9781 gttcgaaagt ccgtcgtatt ccacttttgc cgccgaattc tctttttgat cgcagccgct
     9841 aagcccggca acagccagta agcagagtgc agccagtcct tttttccatg acactgaata
     9901 atgttgcgac atcgttctat ccttcatttt ttgggtgagt aagcgggctg cggcgcgaag
     9961 cagacagatc cacatgtttg tgtcgggcgt agagttttgc gagctggacg agaataaaca
    10021 gcgccaggcc cgccagacag agttgtaaaa taaagcgc
//
LOCUS       DADMIB010000159        10001 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.161, whole genome shotgun sequence.
ACCESSION   DADMIB010000159 DADMIB010000000
VERSION     DADMIB010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10001
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.161"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(269..1633)
                     /gene="tdcG"
                     /locus_tag="JNZ89_003563"
     CDS             complement(269..1633)
                     /gene="tdcG"
                     /locus_tag="JNZ89_003563"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HAY8937306.1"
                     /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSH
                     IVVDLYGALSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGA
                     HIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLS
                     HDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHD
                     GIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISG
                     AEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPC
                     IERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK
                     VVCG"
     gene            complement(1705..2094)
                     /locus_tag="JNZ89_003564"
     CDS             complement(1705..2094)
                     /locus_tag="JNZ89_003564"
                     /EC_number="3.5.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enamine/imine deaminase"
                     /protein_id="HAY8937307.1"
                     /translation="MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPA
                     DVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATY
                     PTRSCVQVARLPKDVKLEIEAIAVRSA"
     gene            complement(2108..4402)
                     /gene="tdcE"
                     /locus_tag="JNZ89_003565"
     CDS             complement(2108..4402)
                     /gene="tdcE"
                     /locus_tag="JNZ89_003565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-ketobutyrate formate-lyase/pyruvate
                     formate-lyase"
                     /protein_id="HAY8937308.1"
                     /translation="MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGD
                     ESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIV
                     GLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPD
                     MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDL
                     EATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNG
                     GAMSLGRTASFLDIYIERDFEAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
                     DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYA
                     AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
                     INGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDK
                     YSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDG
                     EYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNT
                     PDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE
                     DPVRKTNLVGLLDGYFHHEADVEGGQHLNVNIMNREMLLDAIEHPEKYPNLTIRVSGY
                     AVRFNALTREQQQDVISRTFTQAL"
     gene            complement(4436..5644)
                     /gene="tdcD"
                     /locus_tag="JNZ89_003566"
     CDS             complement(4436..5644)
                     /gene="tdcD"
                     /locus_tag="JNZ89_003566"
                     /EC_number="2.7.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate kinase"
                     /protein_id="HAY8937309.1"
                     /translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF
                     LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITD
                     EVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP
                     WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS
                     VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLS
                     SDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLI
                     RRLVMEHLAVLGVEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHL
                     GKVNAPAEFA"
     gene            complement(5670..7001)
                     /gene="tdcC"
                     /locus_tag="JNZ89_003567"
     CDS             complement(5670..7001)
                     /gene="tdcC"
                     /locus_tag="JNZ89_003567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine transporter TdcC"
                     /protein_id="HAY8937310.1"
                     /translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
                     GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
                     LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM
                     VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM
                     VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
                     TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH
                     YLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAM
                     GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF"
     gene            complement(7023..8012)
                     /gene="tdcB"
                     /locus_tag="JNZ89_003568"
     CDS             complement(7023..8012)
                     /gene="tdcB"
                     /locus_tag="JNZ89_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HAY8937311.1"
                     /translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI
                     FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
                     VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA
                     GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA
                     SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
                     NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA"
     gene            complement(8111..9049)
                     /gene="tdcA"
                     /locus_tag="JNZ89_003569"
     CDS             complement(8111..9049)
                     /gene="tdcA"
                     /locus_tag="JNZ89_003569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TdcA"
                     /protein_id="HAY8937312.1"
                     /translation="MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND
                     IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG
                     FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKL
                     QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG
                     ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV
                     WSKNYRIKKAASVLVELAKEYSSYNGCRRRLLIEVG"
     gene            9238..9582
                     /gene="tdcR"
                     /locus_tag="JNZ89_003570"
     CDS             9238..9582
                     /gene="tdcR"
                     /locus_tag="JNZ89_003570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TdcR"
                     /protein_id="HAY8937313.1"
                     /translation="MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMS
                     KFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
                     DRTSFCECNRFP"
BASE COUNT         2695 a         2516 c         2274 g         2516 t
ORIGIN      
        1 ctcgctcaat attttgtagg gcttattatt tttttccgag ccgcatcaag gcgatatgcg
       61 gtctacgttt ttgcaggcga gttattagaa taaagaaatg atacgcgcga ggtcagagaa
      121 aatgttcaca atcaagactt tgaaataacg gagatggata agaattttct actaaattaa
      181 tcgcaagaga atattcattc tctatttgcg gcagatcaca aaaaaaggtg cacatttgtg
      241 cacccaagga tgaaagctga cagcaatgtc agccgcagac cactttaatg gccagtcctc
      301 cgcgtgatgt ttcgcggtat ttatcgttca tatctttgcc ggtttcatac atcgtctcga
      361 tcactttatc gagtgaaaca cgcggtgccg aggtgcggcg catcgccatc cgcgcggcgt
      421 ttactgcttt cacggcatta atggcattac gttcaatgca cgggatttgt acctgtccgg
      481 caaccggatc gcaggtcagc ccaaggttat gctccatcgc gatttccgcc gcattgcata
      541 cctgcgccgg actgccgccc agtagttcag ttaaccctgc cgccgccatt gaacaggcca
      601 cgccaatctc cccctgacag ccgacctccg cgccagagat ggaggcgttc attttataca
      661 gcgcgccaat agcccccgct gccagaaaat agcgggcaat tgaccgctcg tttaccggac
      721 gacggaactt atcgtaataa gccagcactg ccggaataat gccgcacgca ccgttagtcg
      781 gtgccgttac cacgcgcccg ccagctgcgt tttcttcact aaccgccagc gcgtacatgt
      841 tgatccagtc gatgacattc atcggatcgt tagagatgtt atcgctagaa accagctgac
      901 gacgcagcgc tacggcacga cgcggcacat tgagcggacc aggcagcacg ccttcagtgt
      961 tcatcccgcg ttcaataccg tcatgcatca cttgccagat acgggcaaac cctgcgtcaa
     1021 tttccgcttt gctgcgcagc gccagctcgt tgtgcatcat caggccagat atagacaggc
     1081 cgttgtaatc acacattttc agcagttcac ctgctgagtg gaaatcgtaa ggtacggacg
     1141 tttcgacatc gtgcgacagg ccgaagtgtt cttcttcgac aataaacccg ccgccgacag
     1201 agtaataggt tttacttaat agcgcttcct gtcccttcca ggcagtgatc cgcattccgt
     1261 tctcatggcg aggcaacatt tcgggatgga agataatgtt ctttgctaca ggaaaatcaa
     1321 caatatgcgc accagatgcc actggcagcc gcccgctgcg cgttactaac tctataaatg
     1381 cagggatctc atcaatgaca acatcctgcg gactgtttcc tgccagtccc atgataatgg
     1441 cgacatccgt ggcatggcct ttgcccgtca gtgacaacgc cccatacaga tcgaccacaa
     1501 tatggctcgt cgcggttaat aagccgctac tttccagccg atcaataaaa ctttttccgg
     1561 cattcattgg ccccacggta tgcgaactgg agggaccaat cccaattttg aaaatatcga
     1621 atgcactaat catatccaca ccctcggatt gccgttcagt gaagtggagc ggaacgacct
     1681 tgcgaccgtc ccgctcacga ggctttacgc actacgtact gcgatagctt caatttccag
     1741 cttcacatct ttcggcaaac gcgcaacctg cacacagctc cgggtcgggt aggtcgcctg
     1801 atgctcatcg aagaactgct tatagacttc attgatggtg gcaaaatcat tcagatcggt
     1861 gatgaacacg gtcatcttga tgatatcgcc cacgctcagc ccggcagcaa ccacgatcgc
     1921 tttgacgttt tcgaggctta aacgcgcctg atcttgcaca tcagccggga tctcaccggt
     1981 ctgcgggcaa accggaattt gcccggaggt gaagaccatg ctgcctaaat caacgccctg
     2041 aacataaggg ccgattgcgc ctggggcacg ttgcgtttcg ataatctttt tcatacatcc
     2101 tccggcgtca gagcgcctgg gtaaaagtac gtgaaataac atcctgttgc tgttcacggg
     2161 tcagtgcgtt gaagcgcacg gcgtagccag agacacggat tgtcaggtta ggatattttt
     2221 ccgggtgctc gatggcatcc agcagcattt cccgattcat tatgttgacg ttgaggtgtt
     2281 gaccgccttc gacatccgct tcgtggtgga aatacccatc cagcaggccg acaaggttag
     2341 ttttacgtac tggatcttct ttgcccagcg ccgcaggaac gattgagaag gtgtacgaga
     2401 tcccatcttt ggcgtaggtg aacggcagtt tcgccaccga cgtcaatgag gccacggcac
     2461 ctttgcggtc acgaccatgc atcgggttag cgcccggcgc gaacggtgtt ccggcgcgac
     2521 gaccgtccgg cgtattaccg gttttctggc cgtacaccac gttagaagtg atagtcagaa
     2581 tcgactgggt agggacggcg ttgcgatagg ttggcagcgc tttaattttc ttcataaagc
     2641 gttcaaccag gtcgcaggca atgctgtcta cgcgctcgtc gttgttgccg tactgcggat
     2701 attcaccgtc gatttcaaag tccaccgcca ggccgttttc gtcacggatt ggtttcacgc
     2761 gggcatattt gatggcagac agggagtccg tcgccaccga caggcccgcg atgccgcatg
     2821 ccatagtgcg atagacatca cgatcgtgca gcgccatcag cgaagcttcg tagctgtact
     2881 tgtcgtgcat gtagtgaatg atattcagcg cgctgatgta ctgcaccgcc agccagtcca
     2941 tgaagtgatc gaggctgtcc atcactttgt cgtaatccag cacgtcgtcc atcagcggtg
     3001 ctgttttcgg cccgacctga atcttcagct tctcgtccac cccgccgtta attgcgtaga
     3061 gcagcgtttt cgccaggtta gcgcgtgcac caaagaactg catttgctta ccaatcacca
     3121 ttgggctgac gcagcaggca atcgcgtaat cgtcgctgtt gaagtcagta cgcatcagat
     3181 cgtcattttc atactgcaag gaagaggtga cgatcgacac ctgcgcggca tattttttga
     3241 aggcaatcgg taattcttcc gaccaaagaa tggtcaggtt aggttccggt gccggcccca
     3301 tagtgtgcag ggtgtgcaaa tagcggaagg agtttttggt caccagcgta cgaccgtcca
     3361 gccccatccc gccgatcact tccgtcgccc agattgggtc gccggagaac agcgaatcaa
     3421 attccggtgt acgcaggaag cgtaccatac ggatcttcat gatgaagtga tcgatcagtt
     3481 cctgtgcctg ctgctcattg agtacgccag cttcaaagtc gcgctcaatg tagatatcga
     3541 ggaacgatgc cgtgcggccc agcgacatcg cgccgccatt ttgcgatttc actgccgcca
     3601 gataagcgaa gtagagccac tgcaccgctt cttgcgcatt ctgcgccggg cgagagatat
     3661 caaagccata tttcgccgcc atttcctgaa tctgcaacag cgcatgacga tgctctgcca
     3721 gctcctcacg cagacggatg gtggcttcca gatcctcgcc tttttccaga cgagactgga
     3781 gatcggcaaa ttgcagttcg cgttcacgta ccagataact gatgccatac agcgctacgc
     3841 ggcgatagtc accgataatg cgcccacggc catagccatc tggtaaaccg gtcagcacgc
     3901 cagatttacg gcagcgcagc atatccggtg agtaaacatc aaatacgccc tggttatggg
     3961 ttttacgcag atcggtaaac agatattcaa attcactgtc catttcacgg ccataggcgt
     4021 ggaatgaact tttaatcata ttaatgccac cgaacgggtg tagcgcacgt ttcaacggcg
     4081 catccgtttg caggccaaca attttttcca gcggctggtt aatatatccc gcatcatgag
     4141 cggtaattgt ggtggcaata ttggtatcga aatcaaccgg cgcgtgggtt gcgttttcga
     4201 tacggatacc ttccattact ttttcccaca attccgtggt ggcaggcgtc gcttcggcga
     4261 ggaaagattc atcgccttca tacggtgtat agttatgttg aataaaatcg cggacattaa
     4321 tttcgttttt ccagtccgta cctttaaagc caagccatgc gtcggcgtac agcttatcgc
     4381 tggtatcaat atctaccttc atgaaaaata atctctctac aatacttcaa ctaaattatg
     4441 caaattctgc gggcgcgtta actttgccta aatgaatggc atccaaagca atcatttttt
     4501 cttcgttagt cggaataaca gcgcaaatga cacgcgcatt ttcactggaa acaattcgct
     4561 caccacagga gttagagcga ttattcattt ctgtatcaat ctctacgcct aatacagcca
     4621 aatgttccat gaccagacga cgaattaagc ttgaattctc tcctattccg ccggtgaata
     4681 taattccatc caggcgacgt aatgaagctg cgtgtccggc aatatgacgg gcaattcggt
     4741 gaacaaaggt tttaattgcc agttgcgcgc gttcgtgacc ttcatgccag gctttttcca
     4801 gaacacgtaa atccgaagaa agaccggaaa tacctaataa tcccgactct ttattcacta
     4861 cgcgttccaa gtcacccaag ctctggttgg tttggctggc gacccaggac atcgcaccaa
     4921 aatcgacatc gccactgcgg gtacccatca tcaagccttc cagcggcgtc attcccattg
     4981 aggtgtcaac actctgaccg ttgcgaactg cgcagattga cgcgccattg ccaagatgcg
     5041 ccacaaccag gccggagtca tcttccgcta gattcagcaa agaatgtgcg cgctgggaaa
     5101 catagcggtg cgacgtgccg tggaaaccat aacggcgtac acctaactct tcataatatt
     5161 tccacggcag gccgtataaa taagcttccg gagccatcgt ctggtggaaa ctggtatcaa
     5221 ataccgccac ctgagttacg cccggaaata attgctgcgc cgattcaata ccacttaaat
     5281 tggcgtaatt atgcaggggt gccagtggag aaacgcgacg gatattatca atgacctcat
     5341 cggtaataat ggcggactcg gtaaaaatac tgccgccgtg agcgatgcgg tggccaatta
     5401 aggccacact gtcatttaaa ttccgttttt ccagttcaaa tgcaattgcc ttcaatgcac
     5461 cttcgtagct gtggtgagcc agcggtgctg gctctccccc atttacggat aagaatgcat
     5521 tttctgagtt aataccgtcg gcaatacctg acattaatac ttcacagtcg ctggcatcga
     5581 gtacggaaaa cttaatcgaa gacgaaccac agttaataac caaaacaacc ggaaattcat
     5641 tcatctcttt tctcatcctg agttacggat taaaacagtt tgtatacgat gttcaggatg
     5701 gtcagcagac caatcacggt aacaaacacg ttatccagac gaccacggta tttcgccaga
     5761 gacggtgctt tacggatggc atacatcggc aacaggcaca gcagggatgc gataatcggt
     5821 gcgcccatgg cttcaataag gtcgaggatg ttcgggttgg cgtaggcaac aacccaggtg
     5881 gagcccatga tgaagatcat gctgatagtg ttcagtttac ccagcgacac tttagttttg
     5941 tcgcctttat aaccgaactt cagaatcaga ccattcaagc cttccagcgt ccccagatag
     6001 tgaccgaaga aagatttgaa gatagccacg agtgcgatga tggaagccgc atattccagt
     6061 gtaatcgcga acgttgtttt ggtaccggtc atggacgcaa agtggttagc cagataagaa
     6121 agcactggaa tattctgcgc tttggcttcc gccatgttgg ccggagacag cgtaaacagg
     6181 cagctaaagg caaagaacat caccactgca accatcagca tgctggcacg agaaatgatt
     6241 tgggaacatt tacgttcggt gaagtcgcga ccgaagtctt tctcatactc ttcacgttta
     6301 gaaaccacga aggaagagac gattggcgag aagttaaagg agaaaaccat gatggaaatc
     6361 cccagccaga cagtgatcag gataccgtca tgaccggtta acgacagcga accgaggtca
     6421 acctggtcga taactgcaga gttccagtaa gggatcagcg acagagaaat cagcaccagg
     6481 ctggcgataa acggccatac caggtagctc atcactttaa ccatcagatc cttaccaaac
     6541 cagatgacga aagccatcag cagcaacagg aacagcgcca caaagccgcg attcagcggt
     6601 gcaaatccga gctggttttc ccagaacgtc ataaaggtat tggtaatagt aacgccataa
     6661 atccacagca gtgggcaaat cgcgaagaag tacaggaacg tgataaccac gccgccagtt
     6721 ttaccaaaat gctcttccac cgtttccgta atgttgccgg aagggttaga gccagaaaga
     6781 cacagacgcg ccagcgcccg gtggcaataa aatgcgatgg ggtatgccaa taccaacatc
     6841 agaagaatcg ggatcagtcc gccaaaacct gcgcggatag ggaagaacag caccccggcg
     6901 ccgattgccg taccaaacaa gcctaacgtc catgtggtat ctgatttacg ccaggacgat
     6961 tgttttgtct ggctggatac aatgctatct gaagtactca tatcctatcc tcaacgaatt
     7021 aattaagcgt caacgaaacc ggtgatttga gagacgcgag aaagatcgat attgccgccg
     7081 gaaataatac tgacggtttt tctgttttga atatattggt ctaatttacc gcttaataat
     7141 gcagcacatg ccagagcacc tgcgccttcg gtgacgactt tattgcgctg aattaaggca
     7201 atcatactgt ttctgatttc gtcttcgctg accagcacga tgtcatcgac taattcacga
     7261 acgatttcgt aagttaaatt acccgggcgg gagacatcac aaccatccgc cagggtgccg
     7321 gtagttcggt gcgtggttat ttctccggag tggaaagaag ccgccatgcc gtgaacgttt
     7381 tctgactgta cgccaataac acgaatggtc gggttaatag atttaattgc caccgcaata
     7441 ccagcaatta aaccaccacc accaattggc acaatcacgt tatcgacatc atagagatct
     7501 tccataattt ccagaccaat cgttccctgg ccagcaatca ctttcggatc atcgtaaggt
     7561 gggataaaaa tacgaccttc catttcgaca atttcgctca ctttagcgat agtgtcgttg
     7621 aagttatcac catgcagaac gacttctgcg gagtagtcgc acgttgccgc tactttggat
     7681 tttggcgcac cttttggcat caccacttta ccgtcgatac ccagcatcgc gcaggagagc
     7741 gaaacccctt gcgcatggtt gcccgcagaa caggccacca cgcctttgcg tttttccgca
     7801 tcggtcagtg aacttaattt attaaatgcg ccacgaattt taaatgaacc cgtacgctgc
     7861 atattttcaa acttcaggaa tatttcacct ttgcaacgtt cactaaaata gttggagcga
     7921 ggcatgcctg ttttataaat tcgcccagcc agtcgttgtt tcgcttcaat aatatcatca
     7981 atagcaaccg gcagatcgta tgtaatatgc attataaaac ctcttcgcct gaattaaata
     8041 tgtagataac cgtaaccgac acctgcaaaa cagacaggtg gattatttat gtttaaataa
     8101 aaacaaataa ctaaccaact tctattaata gccttcgtct acacccatta taagatgaat
     8161 actctttggc taattccacc aaaaccgatg ctgctttttt aatacgataa tttttcgacc
     8221 ataccgcggc atattgtgcc acaggtaatg tttcttcaac tggaatagta ataaattgat
     8281 ttgaaccaaa aggtgacgtc atatcacaag gaattacagt taagaaatca gcattgagaa
     8341 caagattata aattgtcacg actgagtcgg ttttaacgat gttttcaata ctgatgccat
     8401 ttctttgtaa cgtagtaaga agctcgctgt agtaccccat attggtttgt ggcaacaccc
     8461 actgttcgtt cttcaacgac tccagcgtgg tggtgccggt gcatgttcgg gacttactgg
     8521 ctaccagcac aaactcggac tcgaacagcg gctcaacatg taaatcctga agcttcattt
     8581 ctgcacttaa cgtaccaatc gcaaaatcca gtcgaccgtc gcggattgcc ggtaagaacg
     8641 aagacagttg cgcttcatac atagaaacct gcgctttcgg gaacacctct ttgaacttgt
     8701 tgatcatccc tgacataaaa gtaaaaccaa tcaatgaagg aaaaccaaat gagacttcca
     8761 ccaccgcctc agaagacata ccgcttatct cattaaccat atttttcatt tcacgggtaa
     8821 tggattcgga acgggagagt aacaattgac cggcaggtgt taatgttaca ccggtatttt
     8881 tccgcaccac taattccaca ccaaaataat cttcaatatc gttaatgatt ttactgacgg
     8941 ccggttgagt taaccctaat tcttttgcag ccgagccgat agagccactt ctaatgactt
     9001 cctgaaagac taccaggtgc tgcgttttcg gaagaagaat agtgctcata acgacctacg
     9061 ttaattacct cattgacggc atgaagtgta tcaaaatgaa atgaacagga tatgtgcgac
     9121 cactcacaaa ttaactttca ttactttcca gggtatcgtt attacaatta aatatcttta
     9181 aatatcaaca agttaaaaca taaaaatcag cataaaccct gatttttatc aaaaaaaatg
     9241 acggggataa ccatatttta tggcgataac atcattcgtt atgtggttaa tacaaaaaag
     9301 gggctgagac catatttcaa gcaattaccg gataattacc aggcaaaatt tgagttaaat
     9361 ttaatgagca agttctcaaa ttttattata aataaaccat tttcagcgat aaatactgcg
     9421 gcacgtcaca ttttttcacg ctatttgttg gagaacaaac atttatttta tcaatatttt
     9481 aaaatttcga atacaggtat tgatcatctc gaacaattga ttaacgtcaa ctttttctct
     9541 tctgacagga cgtcattttg tgaatgcaat cgttttccat aaattcttct cccctcatag
     9601 gcgacgaata gcattttgtg ttgaggatca caaaacaaat aattgctggt cgccgcgata
     9661 aggtcagacg aagtcaacaa ggggaatttt cactgtgctt tacatcagcg taggacacag
     9721 aatgttgctt cgtttactgt aacgccgggt aaatgagcgt tttttgatag tgcgtaagtg
     9781 tcgtgcgagg aaaataagca tctattattg tttgtcatga cgacaaggca ggcatcaatg
     9841 aaaggcttcc caattgcaca tatttttcac ccttcaatcc cgccaatgca cgcagtggtt
     9901 aacaatcaca atagaaatat tgattattgg acggtaaaaa gaaagtttgc agaaattgtc
     9961 tccaccaatg acgttaaaaa aatttacagt ataagtaatg a
//
LOCUS       DADMIB010000160         9955 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.162, whole genome shotgun sequence.
ACCESSION   DADMIB010000160 DADMIB010000000
VERSION     DADMIB010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9955
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.162"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            259..456
                     /locus_tag="JNZ89_003571"
     CDS             259..456
                     /locus_tag="JNZ89_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937314.1"
                     /translation="MEITPQQLVEFTIPDGRGQQARTLPDMLSSDAGPLSYPLIYSSK
                     VMIISLFDSTVMPDKYRHNGK"
     gene            complement(406..1599)
                     /locus_tag="JNZ89_003572"
     CDS             complement(406..1599)
                     /locus_tag="JNZ89_003572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8937315.1"
                     /translation="MSPGIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTN
                     LSLSVWAALLMLGSMLFLPSSPWWGKQISRTGSKPVVLWALGGYGISFTLLGLGSVLM
                     ATSAITTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSC
                     GRLFGPLCAAAMLAIHPLAPLGLLMAAPVLALLMLLRLPGTPPQPTPECKSVSLKRDC
                     LPYLLCAILLAAAVSMMQLGLSPALTRQFVTDTTAISQQVAWLLGLSAVAALIAQFGV
                     VRPQRLTPVALLLSAGVLMSGGLAIMLSEQLWLFYPGCAVLSFGAALATPAYQLLLND
                     KLADGAGAGWLATSHTLGYGLCALLVPLVSKTGVAIALIMAALFATILFTIVSVFIWH
                     YRTIK"
     gene            1735..3459
                     /gene="iucA"
                     /locus_tag="JNZ89_003573"
     CDS             1735..3459
                     /gene="iucA"
                     /locus_tag="JNZ89_003573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucA"
                     /protein_id="HAY8937316.1"
                     /translation="MTLPSEKPATDVAAQCFLNALIRETTDWKLTEYPPDELLIPLDE
                     QKSLHFRVAYFSPTQHHRFAFPARLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLC
                     ETFHQRVLESHVHTQQAIDARHDWAALREKALNFGEAEQALLTGHAFHPAPKSHEPFN
                     RREAERYLPDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDN
                     QWLFPLHPWQGEYLLQQGWCQALVAKGLIKDLGEAGTSWLPTTSSRSLYCATSRDMIK
                     FSLSVRLTNSIRTLSVKEVKRGMRLARLAQTDGWQMLQVRFPTFRVMQEDGWAGLLDL
                     NGNIMQESLFALRENLLVDQPKSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITV
                     QQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSA
                     FMPHATDWLDSIGEAQAENIFTHEQLLRYFPYYLLVNSTFAVTAALGAAGLDSESNLM
                     ARVRASLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFA
                     NPLQAQEV"
     gene            3460..4407
                     /gene="iucB"
                     /locus_tag="JNZ89_003574"
     CDS             3460..4407
                     /gene="iucB"
                     /locus_tag="JNZ89_003574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(6)-hydroxylysine O-acetyltransferase"
                     /protein_id="HAY8937317.1"
                     /translation="MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGW
                     LCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFGQVKSDIIHRTAFWQLPLWLSSP
                     ANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW
                     MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIG
                     RHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQR
                     LFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL"
     gene            4407..6149
                     /gene="iucC"
                     /locus_tag="JNZ89_003575"
     CDS             4407..6149
                     /gene="iucC"
                     /locus_tag="JNZ89_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucC"
                     /protein_id="HAY8937318.1"
                     /translation="MNHKDWDFVNRRLVAKMLSEMEYEQVFHAESQGDDHYCINLPGA
                     QWRFIAERGIWGWLWIDAQTLRCTDEPVLAQTLLMQLKPVLSMSDATVAEHMQDLYAT
                     LLGDLQLLKARRGLSASDLINLDADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEY
                     TNTFRLHWLAVKREHMIWRCDNDLDIQQLLTAAMDPQEFTRFSQVWQENGLDHNWLPL
                     PVHPWQWQQKIATDFIADFVEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPL
                     TIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYA
                     ALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLD
                     AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLV
                     KEAFPEMDSLPQEVRDATSRLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQ
                     LLAAVLSDYMNKHPQMAERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEN
                     LQNPLWLVTQEYES"
     gene            6146..7483
                     /gene="iucD"
                     /locus_tag="JNZ89_003576"
     CDS             6146..7483
                     /gene="iucD"
                     /locus_tag="JNZ89_003576"
                     /EC_number="1.14.13.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent L-lysine N(6)-monooxygenase"
                     /protein_id="HAY8937319.1"
                     /translation="MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHP
                     GMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKHKKFYRFLTSRLRTVSREEFSDY
                     LRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFARNICLGTGKQPYLPPCVK
                     HVTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRN
                     NFNALDEAAFADEYFTPEYISGFSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELY
                     HRFEVLRKPRNIRLLPSRSVITLESSGPGWRLLMEHHLDQGRESLESDVVIFATGYRS
                     ALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSL
                     MAWRSARILNRVLGRDLFDLSMPPALIQWRSGSRKKPQPEAASLTHYTANIQE"
     gene            7489..9684
                     /gene="iutA"
                     /locus_tag="JNZ89_003577"
     CDS             7489..9684
                     /gene="iutA"
                     /locus_tag="JNZ89_003577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric aerobactin receptor IutA"
                     /protein_id="HAY8937320.1"
                     /translation="MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAE
                     MAQTTWIIENAELEQQIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLID
                     GVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME
                     FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQ
                     TGLQHSNRLDIMGTGTLNIDESRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPY
                     VSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLRYYPFPTVNANKQAT
                     AFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLN
                     NHKIYTTGRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQK
                     IAAGKAISADAIPGGSVDYDNFLFNAGLLMHITERQQAWFNFSQGVALPDPGKYYGRG
                     IYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYSLSNKSVE
                     RNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKE
                     SSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSF
                     SVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF"
BASE COUNT         2396 a         2564 c         2644 g         2351 t
ORIGIN      
        1 cataaaaaac atgtcagtga aaaagaaacc tggcgttggg ttgaaggata taataaagca
       61 acagaactgg ctcgccaatg ccctgatacc catgtattgt caatttctga tcgtgaaggc
      121 gatttttatg acctgtttga acgcgcagag cagactcccg gaataaaagc tgactggctt
      181 gtcagaatga aatttaataa cagagcaacg ctgaatatta atggtaaacg ggatcatagg
      241 ttgttgcacg aaagaatcat ggagattaca ccgcagcaac tggttgaatt cactatacct
      301 gatgggcggg ggcagcaagc cagaacactg cctgacatgc tttcatcaga cgcaggtcct
      361 ctctcatatc ctctgattta ctccagtaag gtgatgatca tatctttatt tgatagtacg
      421 gtaatgccag ataaatacag acacaatggt aaataatata gttgcaaata atgctgccat
      481 aatcagcgcg attgcgacac ctgttttcga taccagcggc accagcaaag cgcacagtcc
      541 atagccaagt gtgtgactgg tagcgagcca gcccgcgcct gcgccatcag ccagcttatc
      601 attcagtaga agttgataag cgggtgttgc cagagctgct ccaaatgaca gcactgcaca
      661 gcccgggtaa aacaaccata gctgttcgga gagcatgata gccagaccac cactcatcaa
      721 cactccggca ctcaggagca gggccaccgg agtcaggcgc tgcggacgga ctaccccgaa
      781 ctgcgcgata agcgcagcta ctgcggacag acccaacagc caggccacct gttggctaat
      841 ggcggtggta tccgtgacga actggcgagt aagggcaggc gaaagtccaa gctgcatcat
      901 gctcaccgcc gcagccagta atattgcgca aagcagataa ggcagacaat cccgcttcag
      961 actgacgctc ttgcactccg gtgtgggctg tggtggtgtg ccgggcaacc gcagcagcat
     1021 cagcagcgcc agcactggtg ctgccatcag tagccccagt ggcgccagag gatgaatggc
     1081 cagcattgct gccgcgcaca gcggcccgaa tagcctgccg caactcaggc cggagctgat
     1141 ggttgccaga gcggccatgc gattcccttc tccagctctc tgcaatgccc agacctgaca
     1201 ggctggcacc attgccgaca cggtcagccc gtaggcgatc cgggcgatga ttaatattcc
     1261 cagtcccacc gctgttgtta tggcgctggt agccatcagc acgcttccca gccctagcag
     1321 ggtaaagctt atgccatatc ctcccagagc ccacaacacc acaggtttac tgccagtacg
     1381 ggaaatttgc tttccccacc acggggacga tggcagaaac agcattgagc caagcatcag
     1441 cagggcagcc catacagaca gactcagatt tgtctgtatg accagaacag ggagcacaac
     1501 cagcagaccg ttctgtccga taccgagaag cccggcactg aacgcaagtg gccagcagga
     1561 cagtgttttt tggggcgtat cttcgatccc tggtgacatt ataatgcttc aactccatgt
     1621 attaattgtg tttatttgta aaattaattt atctgacaat aacatttatt gttgataatg
     1681 agaatcatta tcgacataat tgttattatt ttactgtgtg ggagctgttt gactatgacc
     1741 ctgccctctg aaaaaccagc cacagatgtg gctgcgcagt gcttcctgaa tgcactgatt
     1801 cgtgaaacca cagactggaa actgacagaa tacccgccag acgaattgct catcccgctg
     1861 gatgagcaga aatcgctcca tttcagagtg gcttatttct ccccaaccca gcatcaccgc
     1921 tttgcatttc ctgcacgtct ggtcacggca tcaggcagtt atcctgtcga ctttaccact
     1981 ctctcccggc ttattattga taagctacgc catcaactgt ttctgcccgt tcccctctgc
     2041 gaaactttcc accagcgcgt gctggaaagc catgtccata cgcaacaggc aattgatgcc
     2101 cgtcatgact gggccgctct gcgtgaaaaa gcgttgaatt ttggcgaggc tgagcaggcg
     2161 ctgctgacag gacacgcttt ccaccctgcg cctaagtctc atgaaccgtt taaccggcgg
     2221 gaggctgaac gctacctgcc tgatatggca ccccacttcc cactgcggtg gttttcggtg
     2281 gataaaacgc aaatcgccgg tgaaagtttg catctcaacc ttcaacagcg gctgacgcga
     2341 tttgccgcag agaatgcgcc tcagttactc aacgaattaa gtgacaacca atggctgttc
     2401 ccgttgcacc cgtggcaggg ggaatatctt ttgcagcagg ggtggtgcca ggcacttgtt
     2461 gctaaagggc tgattaaaga cttaggtgag gccggcacgt cgtggctgcc gaccacctct
     2521 tcccgttccc tctactgtgc caccagccgc gatatgatca agttctccct gagcgtacgg
     2581 ctgaccaact ccatccgtac tctgtccgtg aaagaagtga agcgtgggat gcgcctggca
     2641 cgcctggctc aaaccgacgg ctggcagatg ctacaggtcc gcttcccgac tttccgggta
     2701 atgcaggagg atggctgggc cgggctgctc gatcttaacg gcaacatcat gcaggaaagt
     2761 ctgtttgccc tgcgtgaaaa tctgctggtg gatcagccga aaagccagac taacgtactg
     2821 gtctccctga ctcaggccgc acctgatggc ggtgattcgc tgctggtttc ggcggtaaaa
     2881 cgcctgagcg atcgcctcgg tatcactgtg caacaggccg cccatgcatg ggtcgatgca
     2941 tactgtcagc aagtgctaaa gccgctgttt acggctgaag cggattacgg cctggtgctg
     3001 ctggcgcatc agcaaaatat tcttgtccag atgcttgggg atctgccggt cggatttatt
     3061 taccgtgact gtcagggcag cgcttttatg cctcacgcga cagactggct cgattctatt
     3121 ggcgaggcgc aggcggaaaa tattttcacc catgagcagt tgctgcgcta ttttccttat
     3181 tacctgctgg ttaactccac ttttgctgtg accgctgcgc tgggggctgc cgggctggac
     3241 agcgaatcga atctgatggc tcgtgtacga gcatcgctgg ctgaagtgcg tgatcaggtg
     3301 actcataaaa cctgtctcaa ctacgtgctg gaaagtccgt actggaacgt aaaaggtaac
     3361 tttttctgtt atctgaacga tcataacgag aacaccattg ttgacccttc ggtgatctat
     3421 ttcgatttcg ctaacccgct gcaggctcag gaggtctgaa tgtctgaggc aaacattatt
     3481 cacagcagat atggactgcg ctgtgaaaaa ctcgacaagc ccctgaatct tggctgggga
     3541 ctggacaata gcgcggtgtt gcactgtccc ggggagctgc cgacagggtg gctgtgcgat
     3601 gcgctggatc agatatttat cgccgcacca caactgtcag cagtggctct cccctgggcc
     3661 gaatggcgtg aggagccaca ggcgctgacg ctttttgggc aggtaaaaag cgacattatc
     3721 catcgtactg ccttctggca gttaccgtta tggttgagtt caccggcaaa ccgggcctcc
     3781 ggtgaaatgg tttttgatgc agagcgtgag atttatttcc cgcagcgccc accccgtcca
     3841 cagggtgagg tttaccgccg ttacgatcca cgtattcgca ggatgctgag tttccgcatt
     3901 gccgatcccg tttctgatgc agaacgtttc acccgctgga tgaatgatcc gcgcgttgag
     3961 tatttctggg agcaaagtgg ctcactggag gtacagaccg cctatctgga gcgccagctc
     4021 accggtaaac atgcattccc gctgattggg tgcttcgacg atcggccatt cagctatttc
     4081 gaaatctact gggcggcgga agaccgcatt ggtcgtcact attcgtggca gccctttgac
     4141 cgtggcctgc atctgctggt tggtgaacag caatggcgcg gggcccacta tgtgcaaagc
     4201 tggctgcgcg ggctgacaca ttacctgctg ctggatgagc cccgtacgca gcgcacagta
     4261 ctggagccac gcaccgataa ccagcgcctg ttccgccatc ttgagcctgc gggataccgg
     4321 acaattaaag agttcgactt cccacataag cgctcgcgca tggtgatggc ggatcgtcat
     4381 cacttcttca cggaggtcgg tctgtaatga atcacaagga ctgggatttt gttaaccgtc
     4441 ggctggtggc aaaaatgttg tctgagatgg agtatgagca ggttttccac gcggaatctc
     4501 agggcgatga ccactactgc attaacctgc cgggagcaca atggcgcttc atcgctgaac
     4561 gtggtatctg gggctggctg tggattgatg cccaaacgtt gcgctgcacg gacgaaccag
     4621 tactggcgca gacgctgctg atgcagctaa agccggtgct gtcaatgagt gatgccactg
     4681 ttgcagagca tatgcaggat ttgtatgcca cgctactggg cgacctgcaa ctgctgaagg
     4741 cccgtcgcgg actgagtgcc agtgacctga ttaatcttga tgccgatcgt ctgcaatgcc
     4801 tgctgagcgg tcatcctaaa ttcgttttta ataaaggtcg ccgtggctgg ggcaaagagg
     4861 cgctggaacg atatgcgcca gagtatacca acaccttcag actgcactgg ctggcggtaa
     4921 aacgtgaaca tatgatctgg cgctgcgata acgatctgga tattcagcag ttgttgactg
     4981 ccgcaatgga tccgcaggag tttacacgct tcagtcaggt ctggcaggaa aacgggctgg
     5041 atcacaactg gctaccgctg ccggtacatc cgtggcagtg gcagcaaaaa atcgccacag
     5101 acttcatcgc tgattttgtc gaaggcagga tggtgtctct cggcgagttt ggcgaccagt
     5161 ggctcgccca gcagtcgctg cgtaccctga ccaacgccag ccgccgggga gggctggata
     5221 tcaagctgcc gctgaccatc tacaacacct catgctaccg ggggatccct ggcagatata
     5281 tcgctgccgg accactggct tcacgctggc tgcaacaggt ttttgcgacc gacgccaccc
     5341 tggtgcaaag cggcgcagtg atccttggtg aaccggcggc aggctatgtg tcccatgaag
     5401 gctatgccgc gcttgcccgg gctccctatc gctaccagga aatgcttggt gttatctggc
     5461 gggagaatcc gtgccgctgg ctgaaaccgg atgaaagtcc tgttctgatg gcaacactga
     5521 tggagtgcga cgaaaacaat cagccgctgg caggcgcata tatcgaccgc tccggactgg
     5581 acgctgaaac ctggcttacg caattgttcc gggtggttgt ggttccgctg tatcacctgc
     5641 tttgccgcta cggtgtcgcg cttattgcac acggacaaaa tataacgctc gccatgaaag
     5701 agggggtacc acagcgtgtt ctgctgaaag acttccaggg cgatatgcgg ctggtgaaag
     5761 aagcgtttcc cgaaatggac tctttgcctc aggaggtgcg tgatgccaca tcccgtctga
     5821 gtgcggacta cttaatccat gatttgcaga cgggtcactt cgtgacagta ctgcgtttta
     5881 tttcgccact gatggttcgt cttggcgtac ctgaaaggcg attttatcaa ctgctggcag
     5941 cagtgttgag tgattacatg aacaaacatc cacaaatggc agagcgtttt gcgcttttct
     6001 cactcttcag gccacaaatc attcgcgtgg tgctgaaccc ggtaaaactg acctggccgg
     6061 acctggatgg cggcagtcgc atgctgccga attaccttga gaatctgcaa aatccgctgt
     6121 ggctggtaac tcaggaatat gaatcatgaa aaaaagtgtc gattttattg gtgtcgggac
     6181 agggccattt aatctcagca ttgctgcatt gtcacatcag atcgaagaac tgaactgtct
     6241 cttctttgac gaacatcctc atttttcctg gcatccgggt atgctggtac cggattgtca
     6301 tatgcagacc gtctttctga aagatctggt cagtgcagtt gcacctacaa atccctacag
     6361 ctttgttaac tatctggtga agcacaaaaa gttctatcgc ttccttacaa gcaggctacg
     6421 tacagtatcc cgtgaagagt tttctgacta tctccgctgg gctgctgaag atatgaataa
     6481 cctgtatttc agtcataccg ttgaaaatat tgatttcgac aaaaaaagtc gattgtttct
     6541 ggttcagacc agtcggggag aatattttgc ccgcaatatc tgccttggta caggaaaaca
     6601 accttattta ccaccctgtg tgaagcatgt gacacaatcc tgtttccatg ccagtgaaat
     6661 gaatcttcgt cggccggacc tgagtggaaa acggataacc gtggttggtg gaggacagag
     6721 tggtgcagac ctgttcctta atgcattacg cggggaatgg ggagaagcgg cggaaataaa
     6781 ctgggtctca cggcgtaata attttaacgc actggatgag gctgcttttg ctgatgagta
     6841 ttttacacct gaatatattt caggcttctc cggactgaag gaagatattc gccatcagtt
     6901 actggatgag cagaaaatga catcggatgg catcactgcc gattctttac tgaccattta
     6961 tcgtgagttg taccaccgtt ttgaagttct gagaaaacca agaaatatcc gtctgctacc
     7021 cagtcgctcg gtaataactc tggaaagtag tggtccgggc tggaggttat tgatggaaca
     7081 tcatctggat cagggcagag agagcctgga aagtgatgtg gtgattttcg ccacaggtta
     7141 ccgttctgca ttgccacaaa tacttccctc actgatgccc ttgatcacca tgcacgataa
     7201 gaacaccttt aaagtgcgtg atgacttcac tctggaatgg agtggcccga aagaaaataa
     7261 catctttgcg gtcaacgcca gcatgcaaac tcatggcatc gccgaacccc agctcagcct
     7321 gatggcctgg cgatctgcac gtattcttaa tcgcgtactg gggcgtgatt tattcgatct
     7381 cagtatgccg cccgcactga ttcagtggcg cagcggcagc cggaaaaaac cgcagccgga
     7441 ggctgcttct ttaactcact atacagcaaa tattcaggaa taacgatgat gcgcaaaaag
     7501 tatatgcccc gggctcttgg tccgctgctt cttgtcgtgc tgtcaccagc tgtcgcccag
     7561 caaaacgatg ataatgagat catagtgtct gccagccgca gcaatcgaac tgtagcggag
     7621 atggcgcaaa ccacttggat tatcgaaaat gccgaactgg agcagcagat tcagggcggt
     7681 aaagagctga aagacgcact ggctcagtta atccccggcc ttgatgtcag cagccagagt
     7741 cgaaccaact acggtatgaa catgcgtggc cgcccgctgg ttgtcctgat tgacggtgtg
     7801 cgcctcaact cttcacgttc cgacagccga caactggact ctgtcgatcc ttttaatatc
     7861 gaccatattg aagtgatctc cggcgcgacg gccctgtacg gtggcgggag taccggaggg
     7921 ttgatcaaca tcgtgaccaa aaaaggtcag ccggaaacca tgatggagtt tgaggctggc
     7981 acaaaaagtg gctttaacag cagtaaagat cacgatgagc gcattgccgg tgctgtctcc
     8041 ggcggaaatg accatatctc cggacgtctt tccgtggcat atcagaaatt tggcggctgg
     8101 tttgacggta acggcgatgc caccctgctt gataacaccc agaccggcct gcagcactcc
     8161 aatcggctgg acatcatggg aaccggtacg ctgaacatcg atgaatcccg gcagcttcaa
     8221 ctgataacgc agtactataa aagtcaggga gacgacaatt acgggcttaa tctcgggaaa
     8281 ggcttttccg ccatcagcgg gagcagcaca ccatacgtca gtaaggggct gaattctgac
     8341 cgcattcccg gcactgagcg gcatttgatc agcctgcagt actctgacag tgatttcctg
     8401 ggacaggaac tggtcggtca ggtttactac cgcgatgagt cgttgcggta ctacccgttc
     8461 ccgacggtaa atgcgaataa acaggcgacg gctttctcct cgtcacagca ggataccgac
     8521 cagtacggca tgaaactgac tctgaacagc caactgatgg acggctggca aatcacctgg
     8581 gggctggatg ctgagcatga gcgctttacc tccaaccaga tgttcttcga tctggctcag
     8641 gcaagtgctt ccggagggct gaacaaccat aagatttaca ccaccgggcg ctatccgtca
     8701 tatgacatca ccaatctggc ggccttcctg caatccagct atgacattaa tgatattttt
     8761 accgttagcg gtggcgtacg ctatcagtat actgagaaca gggtagatga tttcatcgac
     8821 tacacgcagc aacagaagat tgctgccggg aaggcgatat ctgccgacgc cattcctggt
     8881 ggttcggtag attacgataa ctttctgttc aatgctggtc tgctgatgca catcaccgaa
     8941 cgtcagcagg catggttcaa tttttcccag ggggtggcat tgccggatcc ggggaaatat
     9001 tatggtcgcg gcatctatgg tgcagcagtg aacggccatc tttccctgac aaagagcgtg
     9061 aacgtcagcg acagtaagct ggaaggcgtg aaagtcgatt cttatgaact gggctggcgc
     9121 tttaccggtg acaacctgcg gactcaaatc gcggcatatt actcgctttc caataagagc
     9181 gtggaaagga ataaagatct gaccatcagt gtgaaggacg acaggcgccg tatttacggc
     9241 gtggaaggtg cggtggacta cctgatcccg gatactgact ggagtaccgg tgtgaacttc
     9301 aatgtgctga aaaccgagtc gaaagtgaac ggtcaatggc aaaaatatga cgtgaaggaa
     9361 tcaagtccat cgaaagcgac agcttacatt aactgggcgc cggaaccgtg gagtctgcgt
     9421 gtacagagca ccacttcttt cgacgtaagc gatgcagagg gtaacgatat taatggttac
     9481 actaccgtcg attttatcag tagttggcag cttccggtgg gaacactcag cttcagcgtt
     9541 gagaacctct tcgaccgtga ctataccact gtctggggac agcgtgcacc tctgtactac
     9601 agcccgggtt acggccctgc ttcactgtac gactacaaag gccggggccg aacctttggt
     9661 ctgaactact cagtgctgtt ctgacgggga tgcttttgca acaagggtat gctgtaaaca
     9721 acatggtcct tggtggccat gttgtttaca gccagtataa tatacagcct taacaagata
     9781 ttccgtctcc ggaatggact gttcaccact gaataacatt atttctgttt tatggatctt
     9841 tgactgaaat ttatcgcata tcctcatttc attgtccgtc tgaaaactaa ccttacaagt
     9901 aagcgtcgtc tcagcaccgt ctggcagatc ctgaaattcc tgagaggatg atctg
//
LOCUS       DADMIB010000161         9938 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.163, whole genome shotgun sequence.
ACCESSION   DADMIB010000161 DADMIB010000000
VERSION     DADMIB010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9938)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9938)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9938
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.163"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..2108)
                     /gene="fdeC"
                     /locus_tag="JNZ89_003578"
                     /pseudo
     CDS             complement(1..2108)
                     /gene="fdeC"
                     /locus_tag="JNZ89_003578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308363.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="intimin-like adhesin FdeC"
     gene            2661..2750
                     /locus_tag="JNZ89_003579"
                     /pseudo
     CDS             2661..2750
                     /locus_tag="JNZ89_003579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308358.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
     gene            3224..3325
                     /locus_tag="JNZ89_003580"
     CDS             3224..3325
                     /locus_tag="JNZ89_003580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937321.1"
                     /translation="MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY"
     gene            3686..3952
                     /locus_tag="JNZ89_003581"
     CDS             3686..3952
                     /locus_tag="JNZ89_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308354.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HAY8937322.1"
                     /translation="MMKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYP
                     YVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGS"
     gene            3952..4092
                     /gene="rpmJ"
                     /locus_tag="JNZ89_003582"
     CDS             3952..4092
                     /gene="rpmJ"
                     /locus_tag="JNZ89_003582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HAY8937323.1"
                     /translation="MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKK
                     KR"
     gene            complement(4127..4354)
                     /locus_tag="JNZ89_003583"
                     /pseudo
     CDS             complement(4127..4354)
                     /locus_tag="JNZ89_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414829.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5176..5718
                     /gene="ecpR"
                     /locus_tag="JNZ89_003584"
                     /gene_synonym="matA"
     CDS             5176..5718
                     /gene="ecpR"
                     /locus_tag="JNZ89_003584"
                     /gene_synonym="matA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECP biosynthesis operon DNA-binding
                     transcriptional regulator EcpR"
                     /protein_id="HAY8937324.1"
                     /translation="MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKD
                     FVFINLNTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAG
                     LSRDIRKELAYVINCRFLRKDIKKDKITDQEMEIIRMTAQGMQPKSIARIENCSVKTV
                     YTHRRNAEAKLYSKIYKLVQ"
     gene            5744..6379
                     /gene="ecpA"
                     /locus_tag="JNZ89_003585"
                     /gene_synonym="matB"
     CDS             5744..6379
                     /gene="ecpA"
                     /locus_tag="JNZ89_003585"
                     /gene_synonym="matB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000150122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="common pilus major fimbrillin subunit EcpA"
                     /protein_id="HAY8937325.1"
                     /translation="MTHWDITSSIQLGKKCNEKKVLAIALVTVFTGMGVAQAADVTAQ
                     AVATWSATAKKDTTSNLVVTSLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKL
                     TSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYN
                     ASNRTTAQDGFTFTIISGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS"
     gene            6437..7105
                     /locus_tag="JNZ89_003586"
     CDS             6437..7105
                     /locus_tag="JNZ89_003586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone EcpB"
                     /protein_id="HAY8937326.1"
                     /translation="MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNS
                     TDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPAD
                     EKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT
                     NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKF
                     IPVK"
     gene            7131..9654
                     /locus_tag="JNZ89_003587"
                     /pseudo
     CDS             7131..9654
                     /locus_tag="JNZ89_003587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414825.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9644..>9938
                     /locus_tag="JNZ89_003588"
     CDS             9644..>9938
                     /locus_tag="JNZ89_003588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="receptor"
                     /protein_id="HAY8937327.1"
                     /translation="MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENN
                     SDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNW"
BASE COUNT         2679 a         2456 c         2309 g         2494 t
ORIGIN      
        1 cccaaccacc ggtttatcag gattcagggt gatggacgaa tgtgctgcat caagcggccc
       61 ggcaacaaac ttcagcgttt gttgtaatgt gcccagctga tactgctcgc tgaaagcacg
      121 cacacacgca caacaacgtt tccggcacgg gtcgaagaaa ccgtagcgct gtaaacgcct
      181 ggttttatct ccgaaattgt accaatggtg acaccattag tgtcttgcgg aacaaatcgc
      241 aagcggctgg cctctcccgt caccgggtta ccatcagtat ccaccgcagt aagcgtcagc
      301 gtgtgggatt gctgaccatc agcaaccaca tctcctgaga gttcattcac gctcagagta
      361 gacttcgaca catccatcat cgtggcgcgc aattctgcag tgacggtttt gctcatgcca
      421 tcaacgctaa cagtaatcgt tgcctcacct gattgcgttc cggtagtgaa gacagactga
      481 tacaccccag cttcagtttc agtgaactca cccagtgttg gctttgcctg tgatttagtg
      541 gccttcaggg aacgagtcac aatatttcca gccggtttga aagttagttc agtcttgatc
      601 tgatctttca tgcccgtgac tggctggccc tcggcgtcgc gcagagacag caccagcggt
      661 ttttgctcat taccgttagc aagcatttga atacggctct gaccgtcaag cgttaacgcc
      721 gtgcgatcgg cgctcatacc agctccggta atgaccacct ctgtctgcac gcgttttgag
      781 gtattgcctt tgttatcgta ggcaaccgca gaaatcgcat aataattgtc tttgcctgga
      841 cgataagccg ggagcgttac ttgccactga ctaccctgac cggtaatttt gccaccttca
      901 gccagtaatg acggcgcttc ccactgcaca tttttcagtc cgtgagttgc tttgctgacc
      961 acaagcccga gggaaagtgt ctgacagccc ttgccttcaa tacgctcagg cagagcaata
     1021 cggatcactt cagatttgcg gtactcaaga acgatgttgt tattacgctc aaccaggtca
     1081 tagcggctgc ctgctagcat tcgacgctcg cgaatgctgt ctgtatcgag ttgtttctcc
     1141 agaggttcgc caatccgata attaacttcc aggccaaagc gagtgtcatt ctcaccactc
     1201 ttgccctgct tatgcccggc actcagggtc agaagaggca caggcgtgta attcacttca
     1261 gcggaaatcg catgtggatc tttctggcgt ttatctttgc caaacagccc aacttcatcg
     1321 ccataatact gctcatacat caggcttgcg ccaagctgcg gtcaggcggg taaatagccc
     1381 tcagcacgaa tatcccagcc attcgccggg cgttcctgat aatcctcaat atccggcgat
     1441 tttttccagc cagaagcccg aatataacca ttggcgctca gtttcagata atcgcgccag
     1501 tattccgcac caacaccaat gcgggtatga ctacgggata aatcatggtc gataaaggtg
     1561 ttcacccccc ccattcagtc atttcctgaa aaatgacgcc agccaaaacc aatatttgac
     1621 tgagtacgat cgtctgtacg atgtattgcc ccctgagtga acaacatatt tgtcggcgta
     1681 tcataaatcg gataaagcat ttccagcgaa gaatccttca gcgagaaatc tttatcgaca
     1741 ttcagtttga cgcgcgctgt accatatttc ccgagccact cctgtatttc ctggttagct
     1801 ttagcggtgg ccattccggt aataaaatta cgtgtcgcat cgctatctgg ctgactgctt
     1861 aaaaatgtcc cggcatttgc ggcaaacgac gcgacatttt tctccacgtt attatcagca
     1921 gttaccgtag tatttcccat gctcaaccgt ggctgaaccg catgctgcgc acgtgccgcc
     1981 attactgggg taaaggtgac agcgagtgga aaaagaacct gaacagagat atttgcccac
     2041 gccacgcagc gggccagaac tgaataacga aatcgtggtt gtttatgacc tgttttataa
     2101 cgtgacattg agataatttc ctgatgaacg aattaacgaa cataggcaga cacaaataat
     2161 ggcgtctgct tgtcagaaaa accggggatt tcccggtttc cttttccgca gaaaaggaaa
     2221 tacctttatg taagaaagtg caccgccacc tgatatatcc agtgtctgta gccactcatc
     2281 aggtggttgg gcgcgggatt atatttttat ttatgggtaa aaatttagct ttttgtgcaa
     2341 gtcattaaat agatacctaa gttatatttc ttactctgcg gacagtgaat aattcattat
     2401 tcagactgaa taataatgac ctgcctttaa ttagcaacta ttggaaatac gtcgaagtag
     2461 gtatatacgc caggataaac cgatatattt attatggata ttcattttcc ttcatcggac
     2521 tgtaaattgc ggggatatcg aacttacact actcatcgca acactcaaac agatttatga
     2581 atttcgttca taacccctga caaatcctgc cgtctaatcg agcttttccc tttacgttat
     2641 gcttctcatg aacgagaaca caacttattc atgaattaac cattccggat aaactatgga
     2701 atcaaattca ggcatcgaaa ggaactggct ggtttccgtt aatagattaa atatctatta
     2761 ctctcccgag agtaaaacta tcaaatcaat gagtaaccga tacagcctca caaattcttt
     2821 cagataatta acccgtcact gcggcacgtt ctctcgtaag gcgtgcctgc agtgtaatcc
     2881 agtatgtatc cggcatagtt gacggtttaa tagaactcaa ttcctctccc tggtcaccaa
     2941 caacgatatc ttgtataaca ccccaggaga tacgacatta tgatgagatg cgatatgctc
     3001 ctcagcacca atcaacgcca ggactgggcc agtcttgaga tcagactcat tcccgggact
     3061 gacttcagtc gacatatatc aatgacgttg gtgcaataaa agatagccga tgtaatacat
     3121 ctattcaaat ttgtgataca tgtcaaaaaa ctggttgacc aaactcgtta tttatataag
     3181 ggcacttacg aagtgcgctc ttttttaaag cgaggaagta ccaatgaaag agaataaagt
     3241 acaacaaatc agtcataaac taattaatat cgttgttttt gtcgcaattg tagaatacgc
     3301 ctatttattt ctccatttct attaataacg gcaataaact gttcacttca gtgatattta
     3361 aaatatgcat tctctccctt tttgtaagta attattatat ccgtgggaga ggaatacacg
     3421 ctgtcaggta atcaatcata ctgcgataaa tcatcggcca gtaaagtgga gataacctcc
     3481 attgtcgaaa aatccatact ctcagcgaaa ccatcatcaa tcactcatcc aggcgtttat
     3541 gggagcgtcg ccaacggctg ttaacaatgc cagacttccc cgttgcggaa attccacata
     3601 ccactaatgg tcacagggat tgggtgttga aatgatccgg atgagcatgt atctttatgg
     3661 ttatgctata acataacagg taaaaatgat gaagcccaat atccatcctg agtatcgtac
     3721 tgtggtgttc cacgacacca gtgttgatga gtactttaaa atcggctcga ctatcaaaac
     3781 agaccgtgag attgagctgg atggcgtaac gtatccgtac gtgacaattg atgtctcttc
     3841 taaatcgcac ccgttctata cagggaagct gagaacagtg gcatcagaag gaaatgttgc
     3901 acgattcacc caacgttttg gtcgttttgt tagcacgaaa aaggggtcgt gatgaaagtt
     3961 cttaactctc tgcgtaccgc aaaagaacgc catccagact gtcagattgt gaagcgaaaa
     4021 ggacggctat atgtgatttg taaatctaat ccacgtttta aggccgttca gggtcgtaag
     4081 aaaaaacgtt gattcaaaat tcgacggatt aacgatattt gtctgattaa taatcagatc
     4141 ggattaatgt tggtgtgttt ataacaccaa cattaatttt cctggggata tattcttcct
     4201 gttcatttga ggccaactgc ctgacgtttc tctacgaata ttccattatc ttaatgttga
     4261 cttgttgacc agcttcgccc ctgtatgctg gcatcaactc tcttttagac tgaacacgcc
     4321 actcagtctc ctccctttgc ggcgcagcct gcattttcac tcaaactgtt aagatgataa
     4381 atgtggtaaa tctgttggta ctaacataaa aacgtttacg ccacaggaac agtctgatcc
     4441 accggtaacc ccgtcgccga cgttcgagtg ccagttagag taacgcgcac agataactgc
     4501 actcagtgcc ctgacaaaga ggccatcgtt cctgtgacag ctggcagcct tcgtttaact
     4561 tcacttaatc tggctcttga gggcttaccg aacagatgac gtacatacgc ccgttcaatt
     4621 ttccatcact tattgtaata aacacctata accattttgt gcggcatgtt aatccattaa
     4681 aatttcttac tgattggcaa atcatcttca atgacagctc attatagttt tatattctat
     4741 cccttaccct taaaacttgt ttttttacta gtccatcaca cagcgcatta agactattcc
     4801 taacacttca gggcaaagtt cctgaccaat ataaaatgca agtaagaatt gaacgttata
     4861 ttgccaataa ccttatgaaa ccaaatgtct ttttcttctt atcaaaaaaa caatattttc
     4921 agtttttcta aatattgact taaccattga attccttttc cgttcacata ttgacactca
     4981 tcaaaaaaaa acataaattt aagcccaatc gaaaataatt aaacttaatc tcgtttaacc
     5041 tttattgata tgtactacgt atcttattta cttccggttt actaaggaaa ctgaatgcac
     5101 ctgtaaaaat tacaggtttg gaaagtagtg acatggcaaa gtgattacag tagggactat
     5161 gaggttaaaa accatatgga atgtcaaaac cgttctgata aatacatctg gtctccccat
     5221 gacgcctact tctataaagg actatctgaa ctgattgtgg atatcgacag attaatttat
     5281 ctatcgttgg agaaaattag aaaagatttc gtgtttatca atctcaatac ggattcttta
     5341 tctgaattta taaaccgtga taatgaatgg ttatccgcgg taaaggggaa acaggtcgta
     5401 ttgattgcgg ccagaaagtc agaagcctta gcaaattatt ggtactacaa cagcaatatt
     5461 aggggcgtgg tatacgctgg actgagtcgt gatattagaa aagaactggc ctatgtgatt
     5521 aattgcaggt tcctgagaaa agatattaag aaagataaaa tcacggacca ggaaatggaa
     5581 attatccgca tgacggccca gggaatgcaa cctaaatcga ttgccagaat tgaaaattgt
     5641 agtgtgaaga cagtgtatac ccatcggcgt aatgctgagg ccaagctgta ctcaaaaata
     5701 tataagttgg ttcagtaaac tccaggcaag ttagttttaa aaaatgactc actgggacat
     5761 cacgtcctca attcaactcg ggaagaaatg caatgaaaaa aaggttctgg caatagctct
     5821 ggtaacggtg tttaccggca tgggtgtggc gcaggctgct gacgtaacag ctcaggctgt
     5881 agcgacctgg tcggcaacag ccaaaaaaga caccaccagt aatctggttg tgacgtcact
     5941 cggtagcttg gcgttccagt atgccgaagg cattaaaggt tttaactcac agaaaggtct
     6001 atttgacgtg gctatcgagg gtgactcaac ggctaccgcc tttaaactga cctcacgtct
     6061 tatcaccaac acattaactc agttggatac ctcaggttcc acactgaatg tgggcgtgga
     6121 ttataacggc gcggcagtcg aaaaaactgg cgataccgtg atgatcgata ccgccaacgg
     6181 cgtactgggc ggcaacctta gcccgctggc taacggttac aatgccagca atcgtaccac
     6241 cgcacaggat ggtttcacct tcaccatcat cagcggcacc accaatggta ccaccgcagt
     6301 aaccgattac agcactctac cggaaggcat ctggagcggc gacgttagcg tacagttcga
     6361 cgcgacctgg accagttaat ctctctgatg taccagcagg ggtagccccc ctgctttatt
     6421 cctggacgga attgttatga aaaagcacct tctgcctctc gctctgctgt tttccggaat
     6481 atctccggcc caggcgctgg atgtcggcga tatatcatcg tttatgaaca gtgacagcag
     6541 cacgctgagc aaaacgatca aaaacagtac cgacagtggt cgccttatca atatccgtct
     6601 cgaacggctc tcttcaccgc ttgacgacgg gcaggttatc tcaatggaca agccggatga
     6661 gttgctactc actcccgcca gcttgctgct acccgcccaa gccagcgaag tgatccgctt
     6721 cttctataag ggacccgcag atgaaaaaga gcgctactac cgcattgtct ggtttgatca
     6781 ggccctcagt gatgcgcagc gcgataatgc caaccgcagc gctgtggcca ctgcttccgc
     6841 ccgcatcggc accattctgg tcgtcgcccc tcgtcaggcg aactaccact ttcagtacgc
     6901 caacggctcc ctgacaaata caggaaatgc gacgctgcgg atcctcgcct acggcccctg
     6961 cctgaaagcc gccaacggta aggagtgtaa agagaattac tacctgatgc cgggcaagtc
     7021 gcgtcgtttt acccgcgtgg acactgcgga taacaaagga cgggttgcac tttggcaggg
     7081 tgataagttc attcccgtga aatagatagc tgtgcagatg gataacgaca atgcctttac
     7141 gacggttctc cccaggactg aaagcccagt ttgccttcgg catggtcttt ttgttcgttc
     7201 agcccgatgc cagcgctgct gacataagtg cgcagcaaat aggtggggtg attattccgc
     7261 aggccttcag tcaggcgctt caggacggca tgagcgtccc gctctatatt catctcgccg
     7321 gtagtcaggg tcgccaggac gatcagcgaa tcggcagcgc ttttatctgg ctggatgatg
     7381 gacagctacg catccggaaa atacagctgg aagagagtga agataacgcc agtgtcagcg
     7441 aacaaactcg acagcagctg atggctctgg cgaacgcccc gttcaatgag gcccttacca
     7501 tcccctgact gacaacgcgc agttggatct cagcttgcgc caactgctgc tgcagctggt
     7561 ggtcaagcgc gaagcgctgg gcaccgtact acgctcacgt agcgaagaca tcgggcagtc
     7621 cagtgttaac accctcagca gtaatctgag ctataacttg ggcgtctata acaaccagtt
     7681 gcgtaacggc gggagcaaca catccagcta tctgtcgctg aataacgtta ctgcgctgcg
     7741 cgaacatcat gtggtgctcg acggctcgct gtacgggatc ggtagcggtc aacaggacag
     7801 tgaattatat aaagcgatgt atgaacgcga ttttgccggt caccgatttg ccggtggaat
     7861 gctcgacacc tggaacttgc agtcattagg gccgatgacc gccatttcag cagggaagat
     7921 ttacggcctt tcctggggaa accaggccag ctccaccatc ttcgacagca gccagtcagc
     7981 cacgccagtg atcgcctttt taccggcggc gggcgaagta catctcaccc gtgatgggcg
     8041 gctactaagc gttcagaact tcactatggg caatcatgaa gtggataccc ggggtctacc
     8101 gtacggtatt tacgatgtgg aagttgaggt gatcgttaac ggtcgcgtga tcagcaaacg
     8161 cactcaacgg gtcaataagc tgtttagccg gggcgcggcg tcggtgcacc actggcgtgg
     8221 caggtatggg gcggtagctt tcatatggat cgctggtcgg aaaacgggaa aaagacgcga
     8281 ccagctaaag agagttggct agcaggtgcc tcgacctccg gctcattgag tacgcttagc
     8341 tgggcggcaa cgggatatgg atacgataat caggcggtgg gtgaaacccg tctgacgctg
     8401 ccgcttgggg gggcgatcaa cgttaacctg caaaatatgc tggccagtga cagctcatgg
     8461 agcagcatcg gcagcatcag cgctactcta ccgggaggct ttagttcgct gtgggttaac
     8521 caggaaaaaa cccgtattgg caatcaattg cgacgtagcg atgccgacaa ccgtgcaatc
     8581 ggcggcacac tcaacctgaa ctcactgtgg tcgaagctgg gcacattcag catcagctac
     8641 aatgatgacc gccgttacaa cagccattat tacacggcag attactatca aaatgtctac
     8701 agcggtacct ttggttcgct tggcctgcgg gccggtattc agcgctataa caacggcgac
     8761 agcaacgcca atacagggaa atatatcgct ctcgatctct cgctaccact gggcaactgg
     8821 tttagcgcag ggatgaccca tcaaaacggc tacaccatgg caaacctgtc agcacgcaaa
     8881 cagtttgatg aagggaccat tcgcactgtt ggtgccaatc tgtcacgtgc catctccggc
     8941 gataccggtg atgacaaaac cctcagcggt ggggcgtatg cacagttcga cgctcgttac
     9001 gccagcggaa cgctgaacgt caatagcgcg gcggacggct acgtcaatac caacttgacc
     9061 gccaatggca gcgtcggctg gcagggtaaa aacattgctg ccagcgggcg gactaatggc
     9121 aacgctgggg tgatattcaa caccgggctg gaggacgacg gtcagatcag cgccaaaatc
     9181 aacgggcgga ttttcccgct taacggcaag cgtaactatc tcccgctctc tccctatgga
     9241 agatatgagg tggagttaca gaacagcaaa aactcactcg acagttacga tatcgtcagc
     9301 ggccgcaaaa gtcgtctgac tctctatcca ggcaatgtcg ctgtcattga gccagaggtg
     9361 aagcagatgg ttaccgtctc cggtcgtatc cgtgcggaag acggcacact gctggctaac
     9421 gcacggatta acaaccatat cggccgaacc cgaaccgatg aaaacggcga gtttgtcatg
     9481 gacgtggata agaaataccc cactatcgat tttcgctaca gtggcaataa aacctgcgaa
     9541 gtggctctgg aactcaacca ggcgcgcggt gccgtctggg tcggtgatgt ggtctgcagc
     9601 ggcctctcat cgtgggcggc ggtgacgcag acaggagaag agaatgagag ttaacctact
     9661 aataacgatg ataattttcg cgctaatctg gccagtaact gcgctcagag cggcagtgag
     9721 caaaacaacc tgggcggatg caccggcacg cgagtttgtg tttgtcgaaa acaactcaga
     9781 cgacaacttt ttcgtcactc ctggcggggc gctggatccg cgcctgaccg gtgccaaccg
     9841 ctggaccggt ttaaaataca ctggttcagg aaccatctat cagcaaagcc tcggctacat
     9901 tgataacggt tacaacaccg gcctttatac caactgga
//
LOCUS       DADMIB010000162         9894 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.164, whole genome shotgun sequence.
ACCESSION   DADMIB010000162 DADMIB010000000
VERSION     DADMIB010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9894)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9894)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9894
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.164"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(55..1338)
                     /gene="aroA"
                     /locus_tag="JNZ89_003589"
     CDS             complement(55..1338)
                     /gene="aroA"
                     /locus_tag="JNZ89_003589"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HAY8937328.1"
                     /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL
                     LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL
                     AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG
                     NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ
                     HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF
                     ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI
                     YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS
                     LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA"
     gene            complement(1409..2497)
                     /gene="serC"
                     /locus_tag="JNZ89_003590"
     CDS             complement(1409..2497)
                     /gene="serC"
                     /locus_tag="JNZ89_003590"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000057138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HAY8937329.1"
                     /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK
                     EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW
                     AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID
                     ETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA
                     NIACPSILDYSIFNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL
                     YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM
                     RASIYNAMPLEGVKALTDFMVEFERRHG"
     gene            complement(2701..3387)
                     /locus_tag="JNZ89_003591"
     CDS             complement(2701..3387)
                     /locus_tag="JNZ89_003591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004991006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HAY8937330.1"
                     /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG
                     VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE
                     DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
                     VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGENNYVRAVQIQ
                     NGRRQVGQNG"
     gene            3517..5277
                     /locus_tag="JNZ89_003592"
     CDS             3517..5277
                     /locus_tag="JNZ89_003592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HAY8937331.1"
                     /translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW
                     SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
                     YPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
                     QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
                     IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA
                     HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
                     FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD
                     IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG
                     LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ
                     TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAH
                     QSLLKAYEKLQRAKAAFWAK"
     gene            5683..6540
                     /gene="focA"
                     /locus_tag="JNZ89_003593"
     CDS             5683..6540
                     /gene="focA"
                     /locus_tag="JNZ89_003593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HAY8937332.1"
                     /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
                     ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS
                     GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT
                     FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
                     MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV
                     IYLRENDHH"
     gene            6595..8877
                     /gene="pflB"
                     /locus_tag="JNZ89_003594"
     CDS             6595..8877
                     /gene="pflB"
                     /locus_tag="JNZ89_003594"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HAY8937333.1"
                     /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
                     AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQT
                     EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTI
                     RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
                     FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW
                     ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS
                     IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
                     VDEKLKMQVGPKSEPIKGDLLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE
                     ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
                     FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR
                     RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
                     KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF
                     NSLTKEQQQDVITRTFTQSM"
     gene            9069..9809
                     /gene="pflA"
                     /locus_tag="JNZ89_003595"
     CDS             9069..9809
                     /gene="pflA"
                     /locus_tag="JNZ89_003595"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HAY8937334.1"
                     /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD
                     THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT
                     CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK
                     NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK
                     LDGVKPPKKETMERVKGILEQYGHKVMF"
BASE COUNT         2534 a         2487 c         2355 g         2518 t
ORIGIN      
        1 atgtgccgac gttttgataa agaaagattt ggctatttat tgcccgttgt tcattcaggc
       61 tgcctggcta atccgcgcca actgctcgaa ataatccgga aatgttttgg ccgtacattt
      121 gggatcaaga atcgtcactg gtgtatctga caacgccacc agcgagaaac acatcgccat
      181 ccggtgatca ttgtatgtcg cgatctcggc aaagttcagt ttttccggtg gagtgatacg
      241 aatgtaatcg tgcccctctt ctacttccgc accgacttta cgcagttctg ttgccatcgc
      301 aaacaggcga tcggtttctt taacacgcca gttatagata ttgcgcagcg tggtggtgcc
      361 ttttgcaaat aacgccgccg tggcaatggt catcgccgca tcgggaatat ggttcatatc
      421 catatcaata gcgttcagtt caccacgcgt gcaggaaata taatcatcgc cccagcaaat
      481 ggtcgcgccc attttttcca gcacatcagc aaagcgaata tcaccctgca tactgttacg
      541 tccaataccg gtcactttta cagtgccgcc tttgattgct gctgctgcca gaaagtaaga
      601 agccgaagat gcatcgcctt cgaccaaata agtacccgga gactgataag actgtccgcc
      661 ttttacgaca aattgttgat agtgctgatt ttcaatttca acaccaaacg tcttcatcag
      721 attgagtgtg atgtcgatat aaggtttaga aaccagatcg cctttaatac gaatcaccgt
      781 atcttccggc gcaagaggcg cagtcattaa cagtgcggtg aggaattggc tggaaacgga
      841 gccatcaacg tcaacgttgc cgccagtaaa gccgccctgt aaacgcaacg gcggataatt
      901 ttcttgttcc aggtaagtga tcttcgcccc gcccaggcgc agcgcatcca ccagatgacc
      961 aatcgggcgt tctttcatac gcggctcacc ggtcagcaca atatcattgc tacccagaca
     1021 aagagctgcc gccagcggac gcattgccgt tccggcgtta ccgaggaaca actccagggc
     1081 accttctgcg tgtaatggac cgccgttacc gataatttcg caacgcgtac gatcggctga
     1141 aagcgtatag cttaccccta acgctgttaa tgcattcagc atatggcgca cgtcatcgct
     1201 atccagcaga ttggttaata ctgttttgcc gtgtgctaat gccgccagca ataaagcgcg
     1261 gttagaaacg ctcttggaac cgggcagatt aatagtgcca tcgacacgag cgatgggttg
     1321 taacgtcagg gattccatga actcaactct ctacaacaga aataaaaacc ccacaggctg
     1381 gctgtgggga ttaagcaaaa tttcggcatt aaccgtgacg gcgttcgaac tcaaccatga
     1441 agtctgtcag cgctttaacg ccttccagcg gcatggcgtt ataaatagaa gcgcgcattc
     1501 cgccgaccac acggtgacct ttcagtgcat gaaggccagc agcaaaagac tcttcaagga
     1561 acaatttgtc aagcgcactg tccgccaact ggaacggcac gttcatccgc gaacggttag
     1621 ctttcgccac gtcattgcgg tagaaatcgc tgttatcaat caccccatat agcagttctg
     1681 ctttttgctg attgatttta tccatttcag ctacaccgcc gttcgctttc agccatttaa
     1741 agaccagacc agatagatac caggcaaatg tcggcggcgt gttaaacatg gagccgttat
     1801 cgttgaagat ggaataatcc agtatcgacg gacacgcgat attcgctttg cccagcaaat
     1861 cttcacgaac gatgacgatt gtcaggccag ccgggccgat atttttctgc gcgccagcgt
     1921 aaatcacgcc ataacggctg acgtcaatcg gacgggaaag aatggttgaa gagaagtcgg
     1981 cggcgaccac cacatctttg ccgaagtctg gcgtttcgtc gatggcgata ccgtcgatgg
     2041 tttcattcgg gcagtaatgc atataagcag cattatcaga gagttgccat tcacgcattg
     2101 gcttaaccgc gcgcagacca tcaacagtca ctttggcgtc aaagacatta ggcgtgcagt
     2161 attttttcgc ttctttaatg gcacttgccg cccagtaacc ggcatcaaca taatctgcgg
     2221 tggttttatc accgagaata ttcagcggta ccgcagcaaa ctgaccgcga ccaccgccat
     2281 ggcagaataa taccttgtag ttggagggga cattaagaag atcgcgaaaa tccttctcgg
     2341 cttcctctgc aacctgaatg aactctttgc cacggtgact cacttccatc accgacgtac
     2401 caagaccgtt ccagtcgcgc agttcctgtt gagcctgttt aagcacctct gccggtagca
     2461 ttgccggacc agaactaaaa ttgaagattt gagccatttc ccctcaccac gttgcgttgc
     2521 tattaacccg cggtcaatcg attgcgacca caggtaatac attattcctg tggctatcgg
     2581 ttttatcatt cagtgacaca catcgcaatg agtaaaaccg ttgagggcaa aaatgaggct
     2641 tgcatcacac aaaagaatct ctcggattat tagcaaaaag ccgatgtttt tactgtcagg
     2701 tcacccgttt tgcccgactt gccttcgtcc attctggatt tgcacagcgc ggacataatt
     2761 gttttccccc gctttcatat gaatgatttc actacaacga atacaggcat agtccgccga
     2821 ctccggcacc actttgtaac gctgcgtaca atcactgggt aaaataagta aacccggttt
     2881 caccttgtca tcttcaaaga aatagacact gatttgcccg ttggtttcga gaatcgccag
     2941 acgtacctgc cccagctgct ccacgccacg caatcgtagc tccataaaga actcaaattc
     3001 cgtcatgttg gagttattga gtttcgacca ggccagctcg ccatcttcaa taataacaac
     3061 cggcttacct tccagtagat cttccagttt ttcactgtgc gccatcaacc acattaccag
     3121 gcggtataac aacgccagag tgataaagac gataagtacc ggcaccatcg gcacatcatc
     3181 ataaaacgcc acatctcccg ccgctgaacc cagcgtgaga atgattaaca cttcaaacag
     3241 cgacatctgt cgcacaccgc gtcttccggt cattttgagg aacaaaaaaa ccagtacaaa
     3301 ggtataaaga ctacgtagtg caacttcgcc aaggaaatca aaaggcactt tatcaaatgc
     3361 catacggtgg agatcgaacg ccttcatttt tatgctctta tcgtggttta ttcgctaaaa
     3421 gcatagtcaa cagttcatcg gcatggcggc ggtgatagcg cctttgagat aaaacccgta
     3481 ttattgcgcg ctttccgtac gactaaagtg attttcatga cgcaaacatt tatccccggc
     3541 aaagatgccg ctctggaaga ttccatcgct cgcttccagc aaaaactttc agacctcggc
     3601 tttcagattg aagaggcctc ctggctgaat cctgtgccta acgtctggtc tgtacatatt
     3661 cgcgacaaag agtgcgcact gtgttttacc aacggtaaag gcgcaaccaa aaaagcggcg
     3721 ctggcttctg cacttggtga atatttcgag cgtctctcaa ccaactactt ttttgctgat
     3781 ttctggctgg gcgaaaccat cgccaacggt ccgttcgtgc attatcccaa cgaaaaatgg
     3841 ttcccactga ccgaaaatga cgatgtgcca gaaggactac tcgatgaccg tctgcgcgcg
     3901 ttttatgatc cggagaatga actgaccggc agcatgctga ttgacctaca atccggtaac
     3961 gaagatcgtg gtatttgcgg cctgccgttt acgcgtcagt ccgacaatca gaccgtttat
     4021 attccgatga atatcattgg taacctgtac gtctccaacg gtatgtccgc aggtaatacc
     4081 cgcaacgaag cacgcgttca gggattgtct gaagttttcg aacgctacgt gaaaaaccgc
     4141 attattgctg aaagcatcag cctgccagag atcccggcag acgtgctggc gcgttaccca
     4201 gcggtggttg aagcgatcga aacactggaa gcagaaggtt tcccgatctt cgcatatgat
     4261 ggttcccttg gcggccagta tccggtgatt tgcgtggtac tgttcaatcc tgctaacggt
     4321 acctgctttg cctctttcgg tgcgcatcct gattttggcg tagcactgga acgtaccgtg
     4381 accgagctgc tgcaaggtcg tggcctgaaa gatttggatg tgtttactcc gccaaccttc
     4441 gatgatgaag aagtcgctga acataccaac ctcgaaacgc actttatcga ttccagcggt
     4501 ttaatctcct gggacctgtt caagcaggat gccgattatc cgtttgtgga ctggaatttc
     4561 tccggcacca cggaagaaga gtttgctacg ctgatggcta tcttcaacaa agaagataaa
     4621 gaagtttata ttgccgatta cgagcatctg ggcgtttatg cttgccgtat tatcgtgcct
     4681 ggcatgtccg atatttatcc ggctgaagat ctgtggctcg cgaataacag tatgggcagc
     4741 catttacgtg aaacgattct ttcgctacca ggcagcgagt gggaaaaaga agattacctg
     4801 aacctcatcg agcaactgga tgaagaaggt tttgatgact ttacccgcgt gcgtgagctg
     4861 ttgggtctgg cgaccgggtc ggataacggt tggtacaccc tgcgtatcgg tgaattaaaa
     4921 gccatgctgg cgctggctgg tggcgatctg gaacaggctc tggtctggac cgaatggacg
     4981 atggagttta actcatcagt atttagtccg gaacgcgcca actattatcg ctgcctgcaa
     5041 acgttgttat tactggcaca ggaagaagat cgccagccgc tgcaatatct gaatgcgttt
     5101 gttcgcatgt acggcgcaga tgccgtggaa gccgccagtg cggcaatgag cggcgaagcg
     5161 gcgttttacg gcctgcaacc ggtagatagc gatctgcacg cgtttgctgc acatcagtcg
     5221 ttgttgaagg cctacgaaaa gctgcagcgc gccaaagcag cattctgggc aaaataaaat
     5281 caaatagcct acgcaatgta ggcttaatga ttagtctgag ttatattacg gggcgttttt
     5341 ttaatgcccc gctttacata tatttgcatt aataaaataa ttgtaattat aaggttaaat
     5401 atcggtaatt tgtatttaat aaatacgatc gatattgtta ctttattcgc ctaatgctcc
     5461 cttttaatta actattttag cggaggatgc ggaaaaaatt caactcattt gttaattttt
     5521 aaaatttatt tttatttgga taatcaaata tttactccgt atttgcataa aaaccatgcg
     5581 agttacggac ctataagcca ggcgagatat gatctatatc aatttctcat ctataatgct
     5641 ttgttagtat ctcgtcgccg acttaataaa gagagagtta gtgtgaaagc tgacaaccct
     5701 tttgatcttt tacttcctgc tgcaatggcc aaagtggccg aagaggcggg tgtctataaa
     5761 gcaacgaaac atccgcttaa gactttctat ctggcgatta ccgccggtgt tttcatctca
     5821 atcgcattcg tcttctatat cacagcaacc actggcacag gcacaatgcc cttcggcatg
     5881 gcaaaactgg ttggcggcat ttgcttctct ctggggctga ttctttgtgt tgtctgcgga
     5941 gctgatctct ttacttccac cgtgttgatt gttgttgcta aggcgagtgg gcgcatcacc
     6001 tggggtcagt tggcgaaaaa ctggctaaat gtctattttg gcaacctggt cggcgcactg
     6061 ctgtttgtac ttttaatgtg gctttccggc gagtatatga ccgcaaatgg tcaatgggga
     6121 ctaaacgtcc tacaaaccgc cgaccacaaa gtgcaccata cttttattga ggccgtctgt
     6181 cttggtatcc tggcaaacct gatggtatgt ctggcagtat ggatgagtta ttctggccgc
     6241 agcctgatgg acaaagcgtt cattatggtg ctgccggtcg cgatgtttgt tgccagcggt
     6301 tttgagcaca gtatcgcaaa catgtttatg atcccgatgg gtattgtaat ccgcgacttc
     6361 gcatctccgg aattctggac cgctgtcggt tctgcaccgg aaaatttttc tcacctgacc
     6421 gtgatgaact tcatcactga taacctgatc ccggttacga tcggtaatat tatcggcggt
     6481 ggtttgttgg ttgggttgac atactgggtc atttacctgc gtgaaaacga tcaccattaa
     6541 tggttgtcga agtacgcagt aaataaaaaa tccacttaag aaggtaggtg ttacatgtcc
     6601 gagcttaatg aaaagttagc cacagcctgg gaaggtttta ccaaaggtga ctggcagaat
     6661 gaagtaaacg tccgtgactt cattcagaaa aactacactc cgtacgaggg tgacgagtcc
     6721 ttcctagctg gcgctactga agcgaccacc accctgtggg acaaagtaat ggaaggcgtt
     6781 aaactggaaa accgcactca cgcgccagtt gactttgaca ccgctgttgc ttccaccatc
     6841 acctctcacg acgctggcta catcaacaag cagcttgaga aaatcgttgg tctgcagact
     6901 gaagctccgc tgaaacgtgc tcttatcccg ttcggtggta tcaaaatgat cgaaggttcc
     6961 tgcaaagcgt acaaccgcga actggatccg atgatcaaaa aaatcttcac tgaataccgt
     7021 aaaactcaca accagggcgt gttcgacgtt tacactccgg acatcctgcg ttgccgtaaa
     7081 tctggtgttc tgaccggtct gccagatgca tatggccgtg gccgtatcat cggtgactac
     7141 cgtcgcgttg cgctgtacgg tatcgactac ctgatgaaag acaaactggc acagttcact
     7201 tctctgcagg ctgatctgga aaacggcgta aacctggaac agactatccg tctgcgcgaa
     7261 gaaatcgctg aacagcaccg cgctctgggt cagatgaaag aaatggctgc gaaatacggc
     7321 tacgacatct ctggtccggc taccaacgct caggaagcta tccagtggac ttacttcggc
     7381 tacctggctg ctgttaagtc tcagaacggt gctgcaatgt ccttcggtcg tacctccacc
     7441 ttcctggatg tgtacatcga acgtgacctg aaagctggca agatcaccga acaagaagcg
     7501 caggaaatgg ttgaccacct ggtcatgaaa ctgcgtatgg ttcgcttcct gcgtactccg
     7561 gaatacgatg aactgttctc tggcgacccg atctgggcaa ccgaatctat cggtggtatg
     7621 ggcctcgacg gtcgtaccct ggttaccaaa aacagcttcc gtttcctgaa caccctgtac
     7681 accatgggtc cgtctccgga accgaacatg accattctgt ggtctgaaaa actgccgctg
     7741 aacttcaaga aattcgccgc taaagtgtcc atcgacacct cttctctgca gtatgagaac
     7801 gatgacctga tgcgtccgga cttcaacaac gatgactatg ctatcgcttg ctgcgtaagc
     7861 ccgatgatcg ttggtaaaca aatgcagttc ttcggtgcgc gtgcaaacct ggcgaaaacc
     7921 atgctgtacg caatcaacgg cggcgttgac gaaaaactga aaatgcaggt tggtccgaag
     7981 tctgaaccga tcaaaggcga tctcctgaac tacgatgaag tgatggagcg catggatcac
     8041 ttcatggact ggctggctaa acagtacatc actgcactga acatcatcca ctacatgcac
     8101 gacaagtaca gctacgaagc ctctctgatg gcgctgcacg accgtgacgt tatccgcacc
     8161 atggcgtgtg gtatcgctgg tctgtccgtt gctgctgact ccctgtctgc aatcaaatat
     8221 gcgaaagtta aaccgattcg tgacgaagac ggtctggcta tcgacttcga aatcgaaggc
     8281 gaatacccgc agtttggtaa caatgatccg cgtgtagatg acctggctgt tgacctggta
     8341 gaacgtttca tgaagaaaat tcagaaactg cacacctacc gtgacgctat cccgactcag
     8401 tctgttctga ccatcacttc taacgttgtg tatggtaaga aaactggtaa caccccagac
     8461 ggtcgtcgtg ctggcgcgcc gttcggaccg ggtgctaacc cgatgcacgg tcgtgaccag
     8521 aaaggtgctg tagcgtctct gacttccgtt gctaaactgc cgtttgctta cgctaaagat
     8581 ggtatctcct acaccttctc tatcgttccg aacgcactgg gtaaagacga cgaagttcgt
     8641 aagaccaacc tggctggtct gatggatggt tacttccacc acgaagcatc catcgaaggt
     8701 ggtcagcacc tgaacgttaa cgtgatgaac cgtgaaatgc tgctcgacgc gatggaaaac
     8761 ccggaaaaat atccgcagct gaccatccgt gtatctggct acgcagtacg tttcaactcg
     8821 ctgactaaag aacagcagca ggacgttatt actcgtacct tcactcaatc tatgtaatta
     8881 gatttgactg aaatcgtaca gtaaaaagcg tacaataaag gctccacgaa agtggggcct
     8941 tttttagcac gagagccttt tttgtcagct atctatactt taaggtgact gccaaaacag
     9001 actcgacgta gccttcgagc tgcgcaccaa cacggcctca gatgggccac atctggagaa
     9061 ataccgcaat gtcagttatt ggtcgcattc actcctttga atcctgtgga accgtagacg
     9121 gcccgggtat tcgctttatc acctttttcc agggctgcct gatgcgctgc ctgtattgtc
     9181 ataaccgcga cacctgggac acgcatggcg gtaaagaagt taccgttgaa gatttgatga
     9241 aggaagtggt gacctatcgc cactttatga acgcttccgg cggcggcgtt accgcatccg
     9301 gcggtgaagc aatcctgcaa gctgagtttg ttcgtgactg gttccgcgcc tgcaaaaaag
     9361 aaggcattca tacctgtctg gacaccaacg gttttgttcg tcgttacgat ccggtgattg
     9421 atgaactgct ggaagtaacc gacctggtaa tgctcgatct caaacagatg aacgacgaga
     9481 tccaccaaaa tctggttgga gtttccaacc accgcacgct ggagttcgcc aaatatctgg
     9541 cgaacaaaaa tgtgaaggtg tggatccgct acgttgttgt cccaggctgg tctgacgatg
     9601 acgattcagc gcatcgcctc ggtgaattta cccgtgatat gggcaacgtt gagaaaatcg
     9661 aactcctccc ctaccacgag ctgggcaaac acaaatgggt ggcaatgggt gaagagtaca
     9721 aactcgacgg tgttaaacca cctaagaaag agaccatgga acgcgtgaaa ggcattcttg
     9781 agcagtacgg tcataaggta atgttctaat ttccccgtaa agcggcaact ttattgagtt
     9841 gccgcttttt tattccgcgc ttcattctgc tacagtgttt ttaacacatt ttat
//
LOCUS       DADMIB010000163         9794 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.165, whole genome shotgun sequence.
ACCESSION   DADMIB010000163 DADMIB010000000
VERSION     DADMIB010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9794
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.165"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            123..743
                     /locus_tag="JNZ89_003596"
     CDS             123..743
                     /locus_tag="JNZ89_003596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY8937335.1"
                     /translation="MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIAD
                     ALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTES
                     GLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIE
                     ALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL"
     gene            1052..2464
                     /gene="cycA"
                     /locus_tag="JNZ89_003597"
                     /gene_synonym="dagA"
     CDS             1052..2464
                     /gene="cycA"
                     /locus_tag="JNZ89_003597"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HAY8937336.1"
                     /translation="MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFLG
                     SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYF
                     TGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEM
                     EFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGF
                     QIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
                     VPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
                     FAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILC
                     SYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWF
                     IALGLGWLFIGKKRAAELRK"
     gene            complement(2509..3171)
                     /gene="ytfE"
                     /locus_tag="JNZ89_003598"
     CDS             complement(2509..3171)
                     /gene="ytfE"
                     /locus_tag="JNZ89_003598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein YtfE"
                     /protein_id="HAY8937337.1"
                     /translation="MAYRDQPLGELALSIPRASALFRKYNMDYCCGGKQTLARAAARK
                     ELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVE
                     RVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEH
                     DEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALA
                     GE"
     gene            complement(3279..4244)
                     /locus_tag="JNZ89_003599"
     CDS             complement(3279..4244)
                     /locus_tag="JNZ89_003599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY8937338.1"
                     /translation="MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLI
                     ALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLP
                     VVIPVFANLLYSQRDGKLAWGKLAPALVCIGIGLACVNIAELNHGLPDFDWARYTSGI
                     VLALVSVVCWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNTQ
                     TPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNVASQRLPTVILGPLIVFETLAGL
                     LYTFLIRQQMPPLMTLSGIALLVVGVVIVVRAKPEKPLTESVSES"
     gene            complement(4352..5212)
                     /gene="qorB"
                     /locus_tag="JNZ89_003600"
     CDS             complement(4352..5212)
                     /gene="qorB"
                     /locus_tag="JNZ89_003600"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HAY8937339.1"
                     /translation="MIAITGATGQLGHYIIESLMKTVPASQIVAIVRNPAKAQALAAQ
                     GITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYT
                     SLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA
                     AGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVT
                     YQNLSEADFAAALKSVGLPDGLADMLTDSDVGASKGGLFDNSKTLSKLIGRPTTTLAE
                     SVSHLFNVNN"
     gene            5301..5681
                     /locus_tag="JNZ89_003601"
     CDS             5301..5681
                     /locus_tag="JNZ89_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HAY8937340.1"
                     /translation="MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREG
                     THRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEK
                     VAALADWIELNLPEVLAVRDERAA"
     gene            complement(5810..7753)
                     /gene="cpdB"
                     /locus_tag="JNZ89_003602"
     CDS             complement(5810..7753)
                     /gene="cpdB"
                     /locus_tag="JNZ89_003602"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HAY8937341.1"
                     /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
                     TATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDVHPVYK
                     ALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDT
                     EVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGAD
                     VVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEEADIT
                     KGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAED
                     SKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQ
                     GDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKAS
                     GKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYD
                     GECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDRHIAFASPDE
                     NRSVLTAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKG
                     QYPMNKVATDDIGFAIYQVDLSK"
     gene            7943..8683
                     /gene="cysQ"
                     /locus_tag="JNZ89_003603"
     CDS             7943..8683
                     /gene="cysQ"
                     /locus_tag="JNZ89_003603"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HAY8937342.1"
                     /translation="MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAA
                     HTVIMDGLRTLTPDIPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
                     ALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHAD
                     AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGA
                     HVHDWQGKPLDYTPRESFLNPGFRVSIY"
     gene            8895..>9794
                     /locus_tag="JNZ89_003604"
     CDS             8895..>9794
                     /locus_tag="JNZ89_003604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937343.1"
                     /translation="MLPRIRHNNFIGAVELFVKSSHTKTHSNNFFNNIQHAFKKKDWV
                     SNYDSLLTLWEFFRCATQIDKDSYQVLSSKNETVKAMDKFLISFSLKDNGAEYTMTLR
                     GSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQ
                     AIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLG
                     FALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAVDS
                     DITEEEICEKYKSTIEAFKKEQLA"
BASE COUNT         2391 a         2361 c         2505 g         2537 t
ORIGIN      
        1 cgggatattg ctattgtttc tttttccccg ggatttgtca tcattcctgt gacaaagttt
       61 tacccaaaga agtgtggctg atatgctgcc cgctactttt ataccctaag aaaggaaata
      121 cgatgaccac cccaactttt gacactatcg aagcgcaagc aagctacggc attggtttgc
      181 aggtagggca acaactgagt gaatctggcc tggaagggct gctgccagaa gcactggttg
      241 caggtattgc cgatgcgctg gaaggcaaac atccggctgt tccggttgat gtggtgcatc
      301 gcgcgctgcg tgaaatccac gaacgcgccg atgccgttcg tcgtcagcgt ttccaggcga
      361 tggctgctga aggtgtgaaa tacctggaag aaaacgccaa aaaagaaggt gtgaatagca
      421 ccgaatctgg cctgcaattc cgcgtgatca accagggtga aggcgcaatt ccggcacgta
      481 ccgaccgcgt tcgtgttcat tacaccggta aactgatcga cggcaccgtg tttgacagct
      541 ccgttgctcg tggtgaaccc gctgaattcc cggttaacgg cgtgatccct ggctggattg
      601 aagcactgac tctgatgccg gtaggttcta aatgggaact gactatcccg caggaactgg
      661 catatggcga gcgcggcgca ggtgcatcca tccctccgtt cagcaccctg gtgtttgaag
      721 tcgaactgct ggaaatcctc taagcagcgc attctgttcc cctcgaacca gaggggagca
      781 ggcattcagc aataaaccct tcagtttgcc aaacggcgct attttgtgtt gcaaagaccc
      841 cgtaagcgtg tatttttgtg agatgtttcg cgttatcacc gtgatatgac actcacttta
      901 aacataaaat taacattaga tctaaatctt agtattcatc ccgcgtattg ttacctaata
      961 tcgatgagtc ccgatacaga ttcgtcgtat catagactga ctaaaggccg tagagcctga
     1021 acaacacaga caggtacagg aagaaaaaaa catggtagat caggtaaaag tcgttgccga
     1081 tgatcaggct ccggctgaac agtcgctacg gcgcaatctc acaaaccgac atattcagct
     1141 tattgccatt ggcggtgcca ttggtacggg gttgtttctg gggtctggca aaacgattag
     1201 ccttgccggg ccgtcgatca ttttcgttta tatgatcatt ggttttatgc tctttttcgt
     1261 gatgcgggca atgggggaat tgctgctttc gaatctggaa tacaaatctt ttagtgactt
     1321 cgcttccgat ttactcgggc cgtgggcagg atatttcact ggctggactt actggttctg
     1381 ctgggttgta accggtatgg cagacgtggt ggcgatcacg gcttatgctc agttctggtt
     1441 ccccgatctc tccgactggg tcgcctcgct ggcggtgata gtgctgctgc tgacgctcaa
     1501 ccttgccacc gtgaaaatgt tcggtgagat ggagttctgg tttgcgatga tcaaaatcgt
     1561 cgccatcgtg tcgctgattg tcgtcggcct ggtcatggtg gcgatgcact ttcagtcacc
     1621 gactggtgtg gaagcgtcat tcgcgcattt gtggaatgac ggcggctggt tcccgaaagg
     1681 tttaagtggc ttctttgccg gattccagat agcggttttc gctttcgtgg ggattgagct
     1741 ggtaggtaca acagctgcgg aaaccaaaga tccggagaaa tcactgccac gcgcgattaa
     1801 ctccattccg atccgtatca ttatgttcta cgtcttcgcg ctgattgtga ttatgtccgt
     1861 gacaccgtgg agttcggtag tcccggagaa aagcccgttc gttgagctgt ttgtgttggt
     1921 aggtttgcct gcggctgcca gcgtgatcaa ctttgtggtg ctgacctctg cggcgtcttc
     1981 cgctaacagc ggcgtcttct ctaccagccg tatgctgttt ggtctggcgc aggaaggtgt
     2041 ggcaccgaaa gcgttcgcta aactttctaa gcgcgcagta ccagcgaaag ggctgacctt
     2101 ctcctgcatc tgcctgctcg gtggcgtggt gatgctgtat gtgaatccta gcgtgattgg
     2161 tgcgttcacg atgattacaa ccgtttccgc gattctgttt atgttcgtct ggacgattat
     2221 cctttgctcg tacctggtgt accgcaaaca gcgtcctcat ctgcatgaga agtcgatcta
     2281 caagatgccg ctcggcaagc tgatgtgctg ggtatgtatg gcgttctttg tgttcgtggt
     2341 cgtgttgctg acactggaag atgacactcg ccaggcgctg ctggttaccc cgctgtggtt
     2401 tatcgcactg gggctgggct ggttgtttat tggtaagaag cgggctgctg aactgcggaa
     2461 ataaccgcat tatcatgctg gatggcgcaa tgccatccag cttttagatc actcacccgc
     2521 cagcgcgcgt gggaacagta cattgttttc cagactgatg tgatccatca ggtcatcaat
     2581 cagttcatta atgccgttat acatcgcttt ccaggtggtg caggcttctg gcggcggtgt
     2641 gacgttattg gtagtgtgtt tgatcacttc cagcagttcg cccgcttcat cgtgctcgct
     2701 ttccattacg ctgattggcc ccattgcctg gctgcccatg ccttgtttga tcatcgggaa
     2761 gaggatctgc tcttctttca tcatgtggct ggaaagctct tcatgcagca tggtcaggta
     2821 ttttgtcagc ccttttggca cgctcggttt gtcggcgtga acgcgctcga ctttagtcgc
     2881 ttgcaggatc agctccggca gttgctcgcg gtgacgatcg tggtagcgca cgatgatatg
     2941 gtcaatgatt tctgccagcg gggcgctacg ccagtctttc tcaatcggtt gttcagcaag
     3001 ctttgccagt tcagcttcaa tgacctcaac atccagttct ttacgtgccg ccgcgcgcgc
     3061 cagcgtctgc ttaccgccac agcagtaatc catattatat ttacgaaaca gagctgaagc
     3121 gcgaggaata gagagcgcca gttcacctaa aggttggtcg cgataagcca tagctgatac
     3181 ctcattctta ataagataag atgtatttta aatacatctt taaggcaaaa gctataaccc
     3241 ttacgtagca gaggcttatt taactcacag ccagtatgtc aactttctga gacagattca
     3301 gttaaaggct tttccggttt tgctctgact acaatgacca cgccaaccac taacagcgcg
     3361 ataccgctca gcgtcatcag cggcggcatt tgctggcgta tcaaaaaggt gtacagcaaa
     3421 cctgccagtg tttcgaaaac gatcagcggc ccgagaatca ctgtcggtaa tcgctggctg
     3481 gcgacgttcc agcagagtgc gccaacccat gagcaaagca cggctatcgc aaccatcaga
     3541 ctaataaaca ccagcggacg ggggccaaaa ggtagggaga agtccggcgt ttgcgtattc
     3601 agccagtaac aggcgacgag atagccgatg agagaaaccg gcagtgtgac cagcgcctgc
     3661 gccgtcgccc acatcatcgg atgtttgtcg ggattctccc gcagccagcg ggcgttgcgc
     3721 agggcatacc atgcccagca gaccacggaa actaacgcta gcacgatgcc tgaggtataa
     3781 cgtgcccagt caaaatcggg gagtccgtgg tttaactcag caatattcac acacgccagg
     3841 ccgatgccaa tacaaaccag tgccggggcg agttttcccc acgcgagttt gccgtcgcgc
     3901 tggctataaa gcagattggc aaaaacggga atcaccaccg gcagggtgcc gataatcatc
     3961 gtggaaacag gcgcaccagt acgttgaatg gcactggcaa ggcagaagta atagatgagg
     4021 ttgcccatca tagtgagcat caaggcggta agccagtcgc gacgcgccaa ctgacgcaga
     4081 cgcacgcgtc ccagccaggc aatgggcagc gcaattaacc ctaacgccag ataacgcccc
     4141 atcgactgca acatcgccgg gtattccggt acgatcaacg gcccgacaaa aataagcccc
     4201 cacatcaacc ctgctaacag ggcgtacagc acgccgctaa tcattactgg catccattgg
     4261 tctgtcagaa gaaagttcag gaagcagaca tgattgctcc cggcatcccg tcattattag
     4321 agaggatgcg ggaggatgcc actttaatta actagttatt aacattaaaa agatggctta
     4381 cgctttcggc taacgttgtc gttgggcggc caatcaattt gctaagcgtt ttgctgttat
     4441 caaacagacc acctttcgat gcgccaacgt cagaatccgt cagcatatcc gccagtccgt
     4501 cgggcagtcc gacgcttttc agtgccgcgg cgaaatcggc ttcgctcaga ttttgatagg
     4561 taacctgttt gccgctctgt ttggtcagct ctgccgctaa ctgtgtcaac gtccaggcac
     4621 tatcgcccgc cagttcgtaa accttgcctt cgtgaccggc ttcgctaatc acgcgtgccg
     4681 cagctgccgc ataatctgcc cgcgttgctg aggcgatttt gccatcgccc gccgcaccga
     4741 taaatacgcc gtgttccagt gctgccgggg cgctggcgag gtagttttcg ctgtaccagc
     4801 cgttgcgcag cagggtgtaa acgatgccag aatcagccaa cattttctcc gtctcaatgt
     4861 gctcatcggc gaggccgagc ggggaggtat ctgcatgtag caggctggta taagcgataa
     4921 atttcacgcc agccgccttt gcggcattaa taacattacg atgctgcggg gcacgttgac
     4981 ccacttcgct ggaagagatc agcagtagtt tttccactcc ctgaagtgca gatgtcagtg
     5041 cggcttcatc gccgtagtca gcctgacgca cggtaatgcc ttgtgctgcc agagcctggg
     5101 cttttgccgg attacgaacg atagccacta tttggctggc aggaaccgtt ttcatcaagg
     5161 attcaataat atagtgacca agttggccag tggcaccagt aatagcgatc atgggaagtc
     5221 tccatcgttt tgtcttgtgt ttaaatacgc taacacctaa acttactttt agtaagtacg
     5281 tacaaaaagg taagtatgaa atgagtcagg ttagcctgtc gcaacaactg aaagagggta
     5341 atctctttgc ggaacagtgc ccgtcgcgcg aggtgttgaa acacgtcacc agccgttggg
     5401 gggtgttgat tctggtggcg ctacgcgaag gtactcatcg ctttagcgac ctgcggcgca
     5461 aaatcggcgg ggtgagcgaa aagatgcttg cgcagtcgtt acaggcgtta gaacaggatg
     5521 gttttcttaa ccgtatcgcg tatccggtgg tgccaccgca tgtggaatat agcctcacgc
     5581 cgttgggcga gcaggtgagc gaaaaggttg ctgcactggc ggactggatt gagttgaatt
     5641 tgcccgaggt gttggcggtg cgggatgaac gtgcggcata actgccggat gcgctgagct
     5701 tatctggtct acggtgcatg gctggtaggg cggataagat gcgccagcat cgcatccgcc
     5761 aataaatgcc ggatgcggtt gataatttat agaccgaaaa agaagtgttt tacttactca
     5821 aatccacctg ataaatcgca aacccgatat catcggtcgc gactttattc atcggatatt
     5881 gccctttctc tttaataaac gctgcggctt tatctgacgg ggaagtttcg aaacggatat
     5941 ccagtttctt atcgccagct atcggtgcta aacgccagtt gttatctgcc gccgggtgaa
     6001 tttctcccgc acgtttcgac tcatcagcaa tccacgctgt cagcaccgag cggttctcat
     6061 ccggtgaagc aaaagcgata tgtctgtcgc ccgtaccggc aaatttgccg ccgtaagcgc
     6121 gatagttatt ggtggcaacg aggaacatag cgttcggatc aatcggcttg ccattaaagg
     6181 tcaggttctt aatccgctct gcattggcat taatcatctg gcactcgccg tcatagcggg
     6241 cgggttgggt aacatcaatc tgataattca caccatcaat aacatcaaag ttataagtgc
     6301 ggaaaccatc ccagttgatg agtgactgtg gtttcgtgct gttaggatca atctggttaa
     6361 actgtccggc ggagcactcc agccactctt tcacctcttt accgctggct ttcactacaa
     6421 tcagcgtatt ggggtagaga taaagatcgg cggcattacg gaaggtcaac tggccttttt
     6481 ccacctccac atagcttgcc gggtcatttt tgcgaccacc aactttaaac ggtgcggcag
     6541 ctgaaagcac cggcagtttt gccagatccg gatcgccctg aatgtaatgt tcgacatacg
     6601 ctttttgcgc gttgttcacg acttgcacgg tcggatcgtc ctgcaccagc gccagatagc
     6661 tatacatatt gtcggcagat ttaccgattg gcttgctgac gaactggcgt gtggcatcgt
     6721 gatcggcttt gagtgtttct accagcttgc tgtcttccgc cgcgagggat tttttattgg
     6781 cgatgtcgta aatcggccgt gcttccgctt tcgcctgcgt cacctgccat ttaccgctgt
     6841 cattactgag ttgtaagtcg accaccccaa gatgatcgcc ccacatgccc ggcattaccg
     6901 ccggaacacc attcagcgtg cctttggtga tatcagcctc ttcgatatca gcaaaatctt
     6961 tacccgggaa aacggcgtga gcatggccaa acataatggc gttaacgccc ggaatttcac
     7021 tgaggtaata aactgagttt tccgccatta ctttatacgg atcggcagac agcccggaat
     7081 gcgccagaac gacaacgaca tcggcacctt tctcgcgcat ttcaggcacg tatttgcgca
     7141 cggtttcggt aatatcattc accgtcactt ttccggataa attagcttta tcccagccca
     7201 tgatttgcgg cggcacgacg ccaatatagc caatcttcag cgtctgtttt tttccgtctt
     7261 tatcgaccac ttcggtatct ttaattaaat acggtgtaaa cattggctgt ttggttctgg
     7321 cgtcaatgac gttggcattt acataaggga atttcgctcc cgccagcgca tttttcaggt
     7381 aatccagacc gtagttaaat tcatgattgc cgagtgtacc gaccgtataa tccagcgtat
     7441 tcagcgcctt ataaaccgga tgaacatcac ctgcttttaa tcctttcgcc gacatgtaat
     7501 cggccagcgg actcccctga atcaaatcgc cgttatcgac cagtacgctg tttttcactt
     7561 cattgcgggc atcgttaatc aggcttgccg tacgtaccag tccgaatttt tccgtggcgg
     7621 tgtctttgta ataatcgaaa tccatcatgt tgctatgcag atcagtggtt tccatgatac
     7681 gcagatcgac cgtcgctgca ttcacactgg cggcaatcag cgtggccagg agcgttgcgc
     7741 taaacttaat catcagggac atccttttat catcgggaat acgaaagaaa agggagaata
     7801 aacgtcttac ttatagaaca gtgaagaatg ccacaatttt acgctttgaa aatgatgaca
     7861 ctatcacagt tggcgcattc attaacgata gggtataagt aaaacaataa gttaacaccg
     7921 ctcacagaga cgaggtggag aaatgttaga tcaagtatgc cagcttgcac ggaatgcagg
     7981 cgatgccatt atgcaggtct acgacgggac gaaaccgatg gacgtcgtca gcaaagcgga
     8041 caattctccg gtaacggcag cggatattgc cgcacacacc gttatcatgg acggtttacg
     8101 tacgctgaca ccggatattc cggtcctttc tgaagaagat cctcccggtt gggaagtccg
     8161 tcagcactgg cagcgttact ggctggtaga cccgctggat ggtactaaag agtttattaa
     8221 acgcaatggc gaattcaccg ttaacattgc gctcattgac catggcaaac cgattttagg
     8281 tgtggtgtat gcgccggtaa tgaacgtaat gtacagcgcg gcagaaggca aggcctggaa
     8341 agaagagtgc ggtgtgcgca agcagattca ggtccgcgat gcgcgcccgc cgctggtggt
     8401 tatcagccgt tcccatgcag atgcggagct gaaagagtat ctgcaacagc ttggcgaaca
     8461 tcagaccacg tccatcggct cttcgctgaa attctgcctg gtggcggaag gacaggcgca
     8521 gctgtacccg cgcttcggac caacgaatat ttgggacacc gccgctggac atgctgtggc
     8581 cgcagctgcc ggagcgcacg ttcacgactg gcagggtaaa ccgctggatt acactccgcg
     8641 cgagtcgttc ctgaatcctg ggttcagagt gtctatttac taaattcaga tggcagaaac
     8701 agtgtatttc ctgattctgc catcctgatt tctcccaacc taaaaagtta taaataaaaa
     8761 gagattgtat ttaaagtgca aaaattcaat tgctaataag ttacatttta ataatgagcg
     8821 ttttttgata gtttacttct ataatgagat atttaatggc gacataaaat aaccaaataa
     8881 aataaggtag ccatatgtta cccaggatca gacacaataa ttttattggt gcggtggagt
     8941 tattcgtaaa atcatcgcat acaaaaacac attcaaacaa tttttttaat aatattcagc
     9001 atgcatttaa gaaaaaagat tgggtttcga attatgatag cctgttaact ttgtgggagt
     9061 tttttcgttg cgcaactcag attgataaag atagttatca agtgctttca tcaaaaaatg
     9121 aaactgttaa agccatggat aagtttctta tcagtttcag ccttaaagat aacggtgccg
     9181 aatatacaat gacattgcga ggcagtggat ttgaatacga agaaatcccc ataacaataa
     9241 atgagtataa ctcattcatg gatttcaaaa accgtgaatt tccgttagaa caaaacagaa
     9301 gattgtatgc ttgggatatt ctgcagaaaa aacagtctga cataccgaaa aggattaaag
     9361 gttatattca ccaggcgatt ggtgacgtgt ctttaggtta tgccttattg gaggatatag
     9421 taagcaaatt aaaacggggt aaatttgaac tccaaatacc aggaggtgga attaaagaat
     9481 gcgatggatg gtatatttac gaaaaaataa ttgatgataa ttttgccata gtcatagaat
     9541 ctttgggctt tgcgcttaaa atctatggag gggatgaacg ttttcgtaat ggttcctctg
     9601 ttgttttgga ggatgaagat tactctctta tttataattt tctggttaat gcaggttgcc
     9661 aacaagtcga attagccgaa caagtggatg cgatagtaag tgcgaatctg gccgtagata
     9721 gtgatattac cgaagaggag atttgcgaga aatataaatc aaccattgag gcgtttaaaa
     9781 aagagcaact agcg
//
LOCUS       DADMIB010000164         9765 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.166, whole genome shotgun sequence.
ACCESSION   DADMIB010000164 DADMIB010000000
VERSION     DADMIB010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9765)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9765)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9765
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.166"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(188..529)
                     /locus_tag="JNZ89_003605"
     CDS             complement(188..529)
                     /locus_tag="JNZ89_003605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HAY8937344.1"
                     /translation="MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGA
                     VPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVEGLKL
                     IESGDWLDRDK"
     gene            complement(532..4302)
                     /gene="tamB"
                     /locus_tag="JNZ89_003606"
     CDS             complement(532..4302)
                     /gene="tamB"
                     /locus_tag="JNZ89_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamB"
                     /protein_id="HAY8937345.1"
                     /translation="MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVP
                     GLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQ
                     VNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSG
                     LNWQEKTLTLKPTSLKGLLIALPKVAQEEVVEPKIENPQPDEKPLGETLKDLFSRPVL
                     PEMTDLHLPLNLNIEEFKGEQLRVTGDTDITVRTMLLKVSSIDGNTKLDALDIDSNQG
                     IVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKVGGALREQLEIGVNLSGPVDM
                     DLRAQTRLAEAGLPLNVEVNSKQLYWPFTGEKQYQADDLKLKLTGKMTDYTLSMRTAV
                     KGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTLNGI
                     NTAKEFPEWPSKLNGLIKTSGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGNSYM
                     QWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKVRGT
                     VEAPQLLADITARGLRWQELSVTQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNINLV
                     TLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTLVGPWSLT
                     RDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDFAMLKPFM
                     PETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTLNLT
                     AELRNNRAELGWTIRLTNNGQFDGQVLVTDPQGRRNLGGNVNIRNFNLAMINPIFTRG
                     EKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMRSTL
                     AGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFEATP
                     NLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNLIVH
                     VGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGELLF
                     SGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSYLLR
                     GQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQVVVS
                     GYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
     gene            complement(4299..6032)
                     /gene="tamA"
                     /locus_tag="JNZ89_003607"
     CDS             complement(4299..6032)
                     /gene="tamA"
                     /locus_tag="JNZ89_003607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamA"
                     /protein_id="HAY8937346.1"
                     /translation="MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLS
                     TIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGV
                     PVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFD
                     SEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEY
                     ESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYST
                     DVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGF
                     KRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMI
                     SRTRSCGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGT
                     LGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQY
                     NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHG
                     LQFYIGLGPEL"
     gene            6238..6876
                     /gene="msrA"
                     /locus_tag="JNZ89_003608"
     CDS             6238..6876
                     /gene="msrA"
                     /locus_tag="JNZ89_003608"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HAY8937347.1"
                     /translation="MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNEPDGME
                     IAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD
                     PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAA
                     MLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA"
     gene            7199..8542
                     /locus_tag="JNZ89_003609"
     CDS             7199..8542
                     /locus_tag="JNZ89_003609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HAY8937348.1"
                     /translation="MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINA
                     QRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSF
                     ILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANM
                     IFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTP
                     RENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA
                     LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
                     DLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
                     IPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA"
     gene            complement(8604..8810)
                     /locus_tag="JNZ89_003610"
     CDS             complement(8604..8810)
                     /locus_tag="JNZ89_003610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1107 domain-containing protein"
                     /protein_id="HAY8937349.1"
                     /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKV
                     KDKLHLSVMSEVNRQVMRLQTEMA"
     gene            9135..9689
                     /locus_tag="JNZ89_003611"
     CDS             9135..9689
                     /locus_tag="JNZ89_003611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HAY8937350.1"
                     /translation="MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDK
                     DQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNT
                     DDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQ
                     WAKDGALTQEEVQQVMDLLQKLLK"
BASE COUNT         2256 a         2673 c         2404 g         2432 t
ORIGIN      
        1 tactcaccgt tcaaagcgtg cccccgtttt acccctgcac atttgtgaac gccagcagag
       61 ttttttatgc gattgcagat atggaaagcg gctcggagag aaaagcaaaa gatggaaaag
      121 ttacaaaaaa aaatcgcgag atacatcgca taaaacaacg ccacccgaag gtggcgtgct
      181 tttattatta cttatccctg tctaaccagt cgccgctttc aattagcttt aatccctcga
      241 cgggtcgttg ataaacgtac atccatgcac tcccatacgg cgtctgaatc aactggcgcg
      301 cgtattcacc gcccctggtg cgcaaggcat caagttcggc cagcgtggcg ttgtcaatac
      361 gataaacttc accgtgtacc gttccgttcc ccggaactgc gcctggatag tggcccaggc
      421 tatacaactg gtagttatcg atactgaaat cgcccagtaa ctgggcattg gtcatccagt
      481 gactgttgcc ttgtttgtgg cgtaaactgc cgtagacaaa tattcgcatt gctaaaactc
      541 gaactgatag agcaaatcca gtgcctggtc tacaccagac acggcttcca gatatagctt
      601 aggcatcagg cgataacgta acgtgagtgt tgctatagag tcaaatatac ccacgccgta
      661 tttcacttgc aggcctggca atacatagcc gctgaccact acctgggagg agtcgcctac
      721 tccctgggtg tcgagcgcta aattgcttac gccaaacgtc tcgccgattt tacccacaat
      781 ctggccactt tgcgcaaccc ccagaccaat cagcatcgag gtcattgccg cactgtcgct
      841 ctgatcgctc tccagccctt gtccacgtag caaataagac aatgcagctt gttgcgacat
      901 cgccgggtca gagaagatct ccgctttcgg ttcgtccgcc agaccagtga cgcgaactcc
      961 ggcgattacg tcgtcttctg tagcatccgg gttacgaata gcttcaatat taagatacgg
     1021 ttgatctggc ggaccagaga acagtagctc acccttacgc acaatcagat cctgaccata
     1081 ggcatggaag cgcccttcag ggatgttgat ctgcccgttc aggcccagcc cttgtttgtc
     1141 ctgaacgacg ttaagatcgc ccgtcagccg cgctttcagg ccaaaggcgt caatgcgcac
     1201 attgttgcca acgtggacaa tcaggttact gttaatcgga atcgacgccg ttttcggctc
     1261 ttccggttgc aggttatcgt taagcatcac cacatcgctg gagacgccta ctgcgctttc
     1321 cggcagatcg tgcaccacga tgcgcgccca cgggacatcc acgcgaccat cgagggtaaa
     1381 caggtttggt gtagcctcga atacaacatc tggcgataca tccattcgta ccatcggcgg
     1441 cacggtgatc cgcactttac tgcctttcgc cgttactcgt gcccgccagt tttcaatttg
     1501 gctccagtcg gcatcaccgt tcaggtagat ttcaccctgc tgggtccgta ctgtaccggc
     1561 aagcgtcgag cgcataccgt taaagttgac cgcaagctgg ctcggctgca tatcaaacgg
     1621 cataaagttg ccgtcgatat ccacacccgt aacctgaagc tgaccaaaca actgcgggct
     1681 ttgcacatca ccacccagac gcaagttggc actcaccatc cccgctgctt tttccccacg
     1741 agtaaagatg gggtttatca tcgcaaggtt gaagttacgg atattgacgt tgccaccaag
     1801 attacggcgg ccttgcggat cggtcaccag cacctgtcca tcaaactggc cgttattggt
     1861 caggcggatg gtccagccca attcggcacg gttgttacgc aattccgccg tcagattcag
     1921 tgtctgaaac gccaccggca gcgccgcatc gttgacggtt tgcgttacct gcacgttacg
     1981 ccccgaaagg gtgatactgc cctgcggcag cccctctttc gtggtgtccc aggcaacatc
     2041 cgctttaccc gtgaagatac cgctggcctg agtggtttct ggcataaacg gtttcagcat
     2101 ggcgaagtcg aagcggttga gattcaccac cgcacgccct tcggcccccg catcgatagt
     2161 ttgcggcacg cacagttccg cattcgggtt aagccagcag tgtggcccga tgctgatttt
     2221 ttgctcctta ttgcggtaat ccagcgcaat atcgcgggtc agcgaccacg ggccgaccag
     2281 cgtctggaag cgggtattgc taagagttcc cttccagcgt tcttctttgc gatcaaaact
     2341 tcctgccaga ttaagctgcc cggagacagg ctcgccctga atccgcaact gtagctcgtg
     2401 ctgcttttcg ctgcctttgg cattcagggt gacgaggttg atatttacat ccggctgcga
     2461 aatttgctca acgcgtacgt cgagtttccc ggcgatctga tcggtggatt taatgtcgcc
     2521 ttccacgcga acctgcgtca cggaaagttc ctgccagcgc aggccgcgcg cggtgatatc
     2581 tgccagtagt tgtggcgctt ccaccgtgcc gcgtactttc accagccctt tcgctgtacc
     2641 gccaagcccc ggcagcgcgt tatccagccc cggcgcgttg atggtggcat caagattgag
     2701 atcttttacc cccagctcgc ctttcacttc ggcactgttt ggccccagtt ccagatgaag
     2761 cccagggatc atccactgca tataactgtt gcctttcagc gtgccgtcaa cgttcacttt
     2821 gttctgtttg acgttaccgg tcagcttcag ttctggcacc tccatctgcc aggtgccgcc
     2881 gtacaggcta ccgctggttt taatcaagcc attgagtttc gacggccact ccgggaactc
     2941 tttggcggtg ttaatgccat taagcgttag ctcaccgcgc caactaatgg cctgctgcca
     3001 gtcgagcaac gccttgagtt cagttttccc ttccagcgcc gcgacggtga gtttgtcgag
     3061 attgacctgc tgttcattac ctttggcatc aagggtaatg gtggctggcg ggatctcctg
     3121 tcccttcact gccgtacgca tagagagcgt gtaatcggtc attttgccgg taagtttcag
     3181 tttcagatca tccgcctgat actgcttctc accagtgaac ggccagtaaa gctgtttgct
     3241 gttcacttcc acgttgagcg gcaatccggc ttccgccagt cgcgtctggg cgcgtaaatc
     3301 catatccacc ggaccggaaa gattaacgcc aatctccagc tgttcgcgca gcgcgccgcc
     3361 cacttttagc ttcacttttt cacctttcaa cggctccacg ttcagtgtgc tgttgagggt
     3421 gatatccacc ggccagttgt ctgacagctg cgccgtgccg ctggcgttga cgatcccctg
     3481 gttggaatcg atatccaggg cgtccagttt agtattgccg tcaatgctgc tcactttcag
     3541 cagcatggtg cgcacggtga tgtccgtgtc gcccgtcacg cgtaactgct cgcctttaaa
     3601 ctcttcaatg ttcaggttaa gcggcaaatg caagtcggtc atttccggca ataccgggcg
     3661 agaaaagaga tctttcagcg tttcgccgag cggcttttca tccggctgcg gattttcaat
     3721 tttcggttcg accacttctt cctgcgccac tttcggcaga gcaatcagca ggcctttcag
     3781 cgacgtcggt ttcagggtca gggttttctc ctgccagttc aggccggagg tgaagtccat
     3841 caccgacacc gtggtgtcat caatcttgat gttgacgttg tccagcgcca cccgtgtcag
     3901 ggtgatggga tacggcgtgg agagatccag cggaccgcta tcttcctctt cttcaacctg
     3961 ttcagaagga ggcatttttt tactgtcgat gttgacctga atgtctttca gcgccaggtc
     4021 attaatacaa acgctactgt tccacaggca ctcaagaccg accgccagat gcagattacc
     4081 cgcttttacc gccacgcctg gctgctcata acgaacgtca gacaaggtga gatcgcgcca
     4141 gccgccggtg accttgccaa tatccagtcc tggcacccag cgatccgccg ctttaaatac
     4201 aagatgcagg ccgctggtgg tgcccaccag aaacgccacc gatcccagca acagtaagat
     4261 aacgataacc acgccgaggc tgattttttt ccataaactc ataattctgg ccccagaccg
     4321 atgtaaaact gtaacccgtg ttcgtcttta tccgcgaccg gtacggcaaa atcgagtttg
     4381 attggcccga ccggcgattc ccagcgcacg ccgaccccgg taccggtttt aaagtcgctg
     4441 cggcgaatat cgcttaccgc ttcgccacta tcgacaaaca ccgcgcccca ccattttccg
     4501 gtcacgttgt actggtattc cagcgatccg gttatcaact tcgaggcccc tttcaggtca
     4561 ccgttggcgt atttcggggc gatagatttg tatttgtagc cgcgaatact gcgatcgccc
     4621 ccggcgaaaa aacgcagatc cggcggtact ttgtcgaaat caccggtttc aatccagccc
     4681 agcgtgccgc gtgtaacgaa acgatggcga tcgtacagtg tgcggatcca gacgttctgc
     4741 gcctggaaaa cggagaaatc gacatctgag ccccaggccg tgttggagta gtcgatagag
     4801 tagcgttgcg agtcgcccca ggttggcatc aggccaccac aagaacgcgt gcggctaatc
     4861 atcaccccag gataaaacag catcgtggtg ttggtaattt caccctgagt aaagtggtcg
     4921 agactccagc gcaggttaat ggcacgctgc caaccgctgg agagatccca gtagcgagaa
     4981 gccaccagcg tagtggagtc agattcggta tcgttcaggt cagtgcgctt aaaaccgccc
     5041 tgcaccaaat aatattgttc cagtggattc ttcagcagcg gcattttata gctgaagtcg
     5101 agggtctgtt ccggcgcgga aatactggta ctggtggtca aactgtgacc gtatgagttc
     5161 atccacggct ttttccacgt cgctttcacg cgcggtccca cgtccgtaga gtaaccgacc
     5221 ccggtttcga tggtgttttc tgttcgcggc gaaaccacgc ccgtcaatgg taatactttc
     5281 gtttcgcgcg ctttatcaaa ttgtggagcc accaccaccg agttaaacca gccggtagca
     5341 gaaagtcggc ggttcagttc cgccagatct ttcgattcat actcatcgcc ctctttaaac
     5401 ggcaccagat tttgcaggta ttcatcgcgg atttgtgatc cttcaaaggt cacatgccca
     5461 aagcggtaac gttcgccact gttataatca atatcccaga aggctttatg caggccgagc
     5521 gcaatgccca gctgcgcttt ggtaaattcg ctatcgaaat aacctttacg caacgcaata
     5581 ctggttaagg actttttgaa attttcataa tcgccctggt tcagtaccgt accaatagcc
     5641 gggcgagtat cgagcaattt caaatagtct ttatcggtcc gcgcgccgcc gcgcaatacc
     5701 acatcggtgc cgccaattaa caccggcaca cctggcgtga ctttggcgat caatacctgc
     5761 cgccctttct ttggcggtgg acggagatca aattcaatgg tcggctggta ataacccagc
     5821 gctttcagac cttcacggat ggcatcatcg acgcgtgcgc gaaagcggcg gtctggcgtc
     5881 acttcatcac tttcaatcgt agaaagctgc gcacgaacgt tcttttccag ctgtcccgat
     5941 aacccctcga cctgtagacg gacgttcgcg gcgacggcag atccgcttaa gcagagtaag
     6001 cttacacagc ataactgtcg gatatagcgc acattttctc ctgaatatcc ttttttcctg
     6061 cccctggaac gccgttaaac ggcttaacaa aaatccagta atatggatta aaaagcagac
     6121 taaaccccaa atatttctta tgttttactt tagacctatt cacggtggtt attgtgtgca
     6181 aatacgcctc ttgttacaac cttaacccca atgaccgatt ttcgggagag cgacaccatg
     6241 agtttatttg ataaaaagca tctggtttcc cccgccgatg ccctgcctgg acgtaacacc
     6301 ccgatgcccg tagccacgct gcatgcggtc aacggtcact caatgaccaa tgaacctgac
     6361 ggaatggaga ttgccatttt tgcgatgggt tgtttctggg gtgtggagcg tctgttctgg
     6421 cagttacccg gcgtttacag caccgccgca ggctataccg gcggctatac gccaaatccg
     6481 acttatcggg aagtgtgctc cggtgatacg ggtcatgccg aagcggtacg cattgtttac
     6541 gatccttccg tcatcagcta tgagcagttg ctacaggtat tttgggagaa tcacgatccc
     6601 gcccagggaa tgcgtcaggg caatgaccac ggcacgcagt atcgttcagc gatttatccg
     6661 ctgaccccag aacaggatgc cgcagctcgc gccagtctgg aacgttttca ggcggcgatg
     6721 cttgccgccg atgacgatcg tcacatcacc acggaaatcg ctaacgccac accgttttat
     6781 tatgccgaag atgaccacca gcaatatctg cataaaaacc catatggtta ctgtggaatt
     6841 ggcggaattg gcgtctgtct gccgccggaa gcatagcgtt acgggtacaa atgtagtttg
     6901 ttgataaagt gctctttgtc tatgcctgat gcggcttaaa cgacttacca ggcctacaaa
     6961 atcgtccaaa ttcaatatat tgcaaggact gcgtaggcct gatcggcata gcgcatcagg
     7021 cagtattgca tttatcagca gtctgaattt taaccctctg gcgactttac agtaccttac
     7081 gctatactag ccactgaaaa ttccggttca ctttcttcga atcggctttc aatgtgtatt
     7141 tcacacaaat taatcaactt tcccttccga ggatctggcc tgaaaggtcg gataagatat
     7201 gttaaacagt attttagtca tactctgctt gatcgctgta agtgcgttct tctcgatgtc
     7261 cgagatctcg cttgccgcct cacgcaaaat caaacttaaa ctgctggctg atgaaggcaa
     7321 tataaatgcc caacgcgttc tgaatatgca ggaaaatccc ggcatgttct ttaccgtggt
     7381 ccaaatcggt ctgaacgcag tggcgattct cggcggtatc gtcggtgatg cggcattttc
     7441 tccagctttt cacagcctgt tctcccgcta tatgtcggca gagctctctg agcaactgag
     7501 ctttattctc tctttctcgt tagtgactgg catgtttatc ctgtttgcgg atttaacccc
     7561 gaaacgcatc ggtatgattg cgccagaagc ggtggctttg cgtatcatca acccgatgcg
     7621 cttctgcctg tacgtttgca ccccgctggt gtggttcttc aacggcctgg cgaacatgat
     7681 cttccgtatt ttcaaactgc caatggtacg taaagatgac atcacttctg atgacatcta
     7741 cgcggtagtg gaagccggtg cgctggcggg cgtgttacgt aaacaggaac acgagctgat
     7801 tgaaaacgtc tttgagctgg aatcccgtac cgttccgtct tcaatgacac cgcgtgaaaa
     7861 cgtgatttgg tttgatctcc acgaagatga gcaaagcctg aagaataagg tggcggaaca
     7921 tccgcactct aagttcctcg tctgtaatga agatattgac cacatcatcg gttatgtcga
     7981 ttctaaagac ctgctgaacc gcgtgctggc taaccaaagc ctggcactga acagcggcgt
     8041 acaaattcgc aacacgctga ttgtgccgga tacgttaacc ctttcagagg cgttggaaag
     8101 ttttaaaacc gcaggtgaag acttcgcggt gatcatgaac gagtacgcgc tggtggtggg
     8161 gatcatcacc ctcaacgacg tgatgaccac gctgatgggc gatctggtcg gtcaggggct
     8221 ggaagagcag attgtcgccc gtgatgagaa ctcatggctg attgacggcg gcaccccaat
     8281 tgacgacgtc atgcgcgtgc tggatattga cgagttcccg cagtcgggca actacgaaac
     8341 catcggcggc tttatgatgt ttatgctgcg taagatcccg aaacgcaccg attcggtgaa
     8401 attcgccggc tacaaatttg aagtggtgga tatcgataac taccgcatcg accagctgct
     8461 ggtgacccgg atcgacagca aggccaccgc cctttcgcca aaactgcctg acgctaaaga
     8521 taaagaagaa agcgtcgcgt aacccccaga aacatcaacg gctcctgaat caggagccgt
     8581 cttattactg catagcactt tggttaagcc atctctgttt gcagacgcat aacctgacgg
     8641 ttaacttcgg acatcactga caaatgcagc ttatccttca cttttgggat aagaatctta
     8701 cccttatcaa attcaaaagc gccaacgtcc ttgatgtata accgtccacg gaacaggatc
     8761 tttacgtact tcgccacctg aagtgggttg taccgttgga aaattttcat tgttatctcc
     8821 tgctgagtat tacgcctgtg cggtgccaca atcggcccaa ctattatgag acgcaaattt
     8881 taatgcttag tgactataga ctatccgggc aatgtttcca ccgcgtataa ctttttttac
     8941 ctaaaggtta caattattca gaattatctt tttaccgaag cgcggtcttc agtataagca
     9001 ttcatttttc atatgatttg tgcgcttgac cgcaaactgg catcacactt gcgggaaatt
     9061 cgataaatag cacatatgat taaaactcag atccaagtgg tcggatcacc tgcatatcat
     9121 aagaaggaaa caccatgacc ctacgcaaga ttctggcact cacctgcctg ctgttgccga
     9181 tgatggcttc cgcacatcag ttcgaaaccg gtcagcgagt gccgccgatt ggcattaccg
     9241 atcggggcga gttggtgctt gataaagatc agtttagcta caaaacctgg aacagcgcgc
     9301 agttagtggg aaaagtgcga gtactgcaac atattgctgg tcgcacctct gcaaaagaga
     9361 aaaacgcgac gctgattgaa gcgattaaat cagcaaagtt accgcacgat cgttaccaga
     9421 ccaccaccat tgttaacacc gacgacgcaa ttccgggttc cggcatgttt gtgcgcagca
     9481 gtctggagag taataaaaag ctttatccct ggtcgcagtt tattgtcgat agcaatggcg
     9541 tcgcgcgcgg tgcctggcag ctggatgaag aaagttccgc tgtagtggtg ctggataagg
     9601 atggtcgcgt gcaatgggcc aaagacgggg cgctcacaca ggaagaggtg cagcaagtga
     9661 tggacctgct gcaaaagttg ctcaaataat ggcaataaca taaattctgc aaaaataatt
     9721 ttcccctatc gttatctatg ggatagggga attaggtctc tgagc
//
LOCUS       DADMIB010000165         9620 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.167, whole genome shotgun sequence.
ACCESSION   DADMIB010000165 DADMIB010000000
VERSION     DADMIB010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9620
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.167"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            150..731
                     /locus_tag="JNZ89_003612"
     CDS             150..731
                     /locus_tag="JNZ89_003612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HAY8937351.1"
                     /translation="MKQQEEHNNKIDLLEKQQAQLKSQLETIQKQQTGIISSTKTLTH
                     VIKSVKDQQNTFIFTEFNPAKTKYFILNNGSVALAGRVLSIDATENGSVIHISLVNLL
                     STPISNIGFNATWGGEKPVDAKEFARWQQLLFNTSMKSTLKLLPGQWQDINLTLKGVS
                     PNNLGYLKLAINMENIQFDNLPSAENRQKRSKK"
     gene            775..5625
                     /locus_tag="JNZ89_003613"
     CDS             775..5625
                     /locus_tag="JNZ89_003613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY8937352.1"
                     /translation="MNKIFKVIWNPATGNYTVTSETAKSRGKKSGRSKLLISALVAGG
                     MLSSFGALANAGNDNGQGVDYGSGSAGDGWVAIGKGAKANTFMNTSGSSTAVGYDAIA
                     EGQYSSAIGSKTHAIGGASMAFGVSAISEGDRSIALGASSYSLGQYSMALGRYSKALG
                     KLSIAMGDSSKAEGANAIALGNATKATEIMSIALGDTANASKAYSMALGASSVASEEN
                     AIALGRSSVASGTDSLAFGRQSLASAANAIAIGAETEAAENATAIGNNAKAKGTNSMA
                     MGFGSLADKVNTIALGNGSQALADNAIAIGQGNKADGVDAIALGNGSQSRGLNTIALG
                     TASNATGDKSLALGSNSSANGINSVALGADSIADLDNTVSVGNSSLKRKIVNVKNGAI
                     KSDSYDAINGSQLYAISDSVAKRLGGGAAVDVDDGTVTAPTYNLKNGSKNNVGAALAV
                     LDENTLQWDQTKGKYSAAHGTSSPTASVITDVADGTISASSKDAVNGSQLKATNDDVE
                     ANTANIATNTSNIATNTANIATNTTNITNLTDSVGDLQADALLWNETKKAFSAAHGQD
                     TTSKITNVKDADLTADSTDAVNGSQLKTTNDAVATNTTNIANNTSNIATNTTNISNLT
                     ETVTNLGEDALKWDKDNGVFTAAHGTETTSKITNVKDGDLTTGSTDAVNGSQLKTTND
                     AVATNTTNIATNTTNISNLTETVTNLGEDALKWDKDNGVFTAAHGNNTASKITNILDG
                     TVTATSSDAINGSQLYDLSSNIATYFGGNASVNTDGVFTGPTYKIGETNYYNVGDALA
                     AINSSFSTSLGDALLWDATAGKFSAKHGTNGDASVITDVADGEISDSSSDAVNGSQLH
                     GVSSYVVDALGGGAEVNADGTITAPTYTIANADYDNVGDALNAIDTTLDDALLWDADA
                     GENGAFSAAHGKDKTASVITNVANGAISAASSDAINGSQLYTTNKYIADALDGDAEVN
                     ADGTITAPTYTIANAEYNNVGDALDALDDNALLWDETANGGAGAYNASHDGKASIITN
                     VANGSISEDSTDAVNGSQLNATNMMIEQNTQIINQLAGNTDATYIQENGAGINYVRTN
                     DDGLAFNDASAQGVGATAIGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSSQVIA
                     KGSRDTSITENGVVIGYDTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVRQLQ
                     NAIGAVATTPTKYFHANSTEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVDANAL
                     NGIAIGSNAQVIHVNSIAIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGSADGQRQ
                     ITNVAAGSADTDAVNVGQLKVTDERVAQNTQSITNLNNQVTNLDTRVTNIENGIGDIV
                     TTGSTKYFKTNTDGVDANAQGKDSVAIGSGSIAAADNSVALGTGSVAEEENTISVGSS
                     TNQRRITNVAAGVNATDAVNVSQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGSTTR
                     ISNVSAGVNNNDAVNYAQLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAM
                     TGLPQAYTPGASMASIGGGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAAL
                     GAGIQW"
     gene            5993..7648
                     /gene="lldP"
                     /locus_tag="JNZ89_003614"
     CDS             5993..7648
                     /gene="lldP"
                     /locus_tag="JNZ89_003614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HAY8937353.1"
                     /translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
                     WTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
                     IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
                     LIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWR
                     GIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFR
                     FGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEW
                     VINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPS
                     DAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLG
                     WLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIAC
                     AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
     gene            7648..8424
                     /gene="lldR"
                     /locus_tag="JNZ89_003615"
     CDS             7648..8424
                     /gene="lldR"
                     /locus_tag="JNZ89_003615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
                     /protein_id="HAY8937354.1"
                     /translation="MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVS
                     RNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDIL
                     EARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHN
                     IVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAM
                     MAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA"
     gene            8421..9611
                     /gene="lldD"
                     /locus_tag="JNZ89_003616"
     CDS             8421..9611
                     /gene="lldD"
                     /locus_tag="JNZ89_003616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent L-lactate dehydrogenase"
                     /protein_id="HAY8937355.1"
                     /translation="MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSE
                     VALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADTHGIP
                     FTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
                     PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
                     DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
                     GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLY
                     ALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAK
                     GNAA"
BASE COUNT         2457 a         2409 c         2490 g         2264 t
ORIGIN      
        1 aactctaccg gcattgatcg ctggtcggag gaaataagga tttttacatg aacttgaaga
       61 agattttttt cagtgctgtc actgtttcag ttctctgcgc attaacggga tgtgactaca
      121 ttgaagaagg caagccagaa agtagtttat tgaaacaaca agaagaacat aacaataaaa
      181 ttgatctact tgaaaaacaa caagcacagc taaagagtca actggaaact attcaaaaac
      241 aacaaactgg cataataagc agtacaaaga ctttaactca cgtaattaaa tccgttaaag
      301 atcaacaaaa cacttttatt tttaccgagt ttaacccagc aaaaacgaag tatttcatcc
      361 tgaacaatgg ttcggtggct ttagcgggtc gagtgttatc cattgacgcc acagagaatg
      421 gcagtgttat tcatatttca ctggtcaact tattaagtac acctatctca aatattggtt
      481 ttaatgcgac atggggtggt gaaaaacctg tcgatgccaa agagtttgcc cggtggcaac
      541 aattactttt caacacatca atgaaatcca cattgaaatt attaccaggt caatggcaag
      601 acattaattt gaccctgaag ggtgtctcgc ccaataacct gggatatctg aagttagcca
      661 tcaacatgga aaatattcag ttcgacaatc ttccctctgc tgaaaatcgg cagaaaagaa
      721 gcaaaaaata aatgcagtta gtacacttat aacaaggaat agcgagcatc attaatgaac
      781 aaaatattta aagttatctg gaaccctgcg acagggaatt atactgttac cagcgaaacg
      841 gcaaaaagcc gtggcaagaa atctgggcgc agtaagctgt taatttctgc gctggttgcg
      901 ggtggaatgt tgtcgtcgtt tggggcattg gcgaatgccg ggaatgacaa cggtcagggt
      961 gttgattacg gtagtggatc agctggcgac ggctgggttg ctataggcaa aggggcgaaa
     1021 gcaaatactt ttatgaacac cagtggttcc agtactgctg tgggttatga cgctatagct
     1081 gaaggccaat atagctctgc catcgggtca aaaacccatg cgattggtgg tgcatcaatg
     1141 gcctttgggg ttagtgcaat atcagaaggc gatagaagta tagcactggg tgcctcttcg
     1201 tattcattgg gccaatactc aatggccctc ggccgttatt caaaagcatt gggtaaattg
     1261 tctattgcta tgggggactc ttccaaagcg gaaggagcaa acgccattgc cctgggaaat
     1321 gccactaaag ctactgagat tatgagtatt gctcttggcg acaccgccaa tgcgtcaaaa
     1381 gcgtattcaa tggcgctggg agcaagtagc gtcgcatctg aagaaaacgc aattgccctg
     1441 gggcgtagca gtgtagctag cggtactgac agcctcgcat ttggcagaca atcacttgcc
     1501 agcgcagcga acgctattgc gataggtgct gagaccgaag ccgctgaaaa tgcaactgct
     1561 attggcaata atgcgaaggc aaaagggact aatagcatgg caatggggtt cggaagcctt
     1621 gccgataaag tcaatactat cgcattagga aatggcagcc aggctctggc agataatgca
     1681 atcgccatag gccagggcaa caaagctgat ggcgtggatg ccatcgctct gggtaatggt
     1741 agccagtcga gaggcttaaa caccattgcc ttaggcacag ccagtaatgc aactggtgat
     1801 aagagtcttg cgcttggtag taatagcagt gccaacggta ttaactctgt cgcgctgggc
     1861 gcagattcca ttgcggattt agacaatacc gtctctgtcg gcaatagttc attaaaacgc
     1921 aagatcgtta atgtgaaaaa tggcgcgatc aagtctgaca gttacgatgc cattaatggt
     1981 tcacaacttt atgccattag cgactcggta gcaaaaaggc ttggaggagg ggctgcagta
     2041 gatgttgatg acggtactgt tacagcacca acctacaatt taaaaaatgg tagcaaaaat
     2101 aacgtagggg ctgcgctcgc tgtacttgat gaaaacaccc tgcaatggga ccaaaccaaa
     2161 ggcaaataca gcgctgctca tggtactagt agcccaactg ccagcgtaat caccgatgtt
     2221 gcggatggca cgatttcagc ctccagtaag gatgcggtta acggttccca actgaaagct
     2281 accaatgacg atgtcgaagc caacaccgcc aatatcgcta ctaataccag caacattgcc
     2341 acgaatacgg caaatattgc caccaatacc accaatatca ccaacctgac ggattccgtt
     2401 ggtgaccttc aggctgatgc cctgctctgg aacgaaacta aaaaggcatt cagtgcagct
     2461 cacggccagg ataccaccag caaaatcacc aacgttaaag atgccgacct gacggctgac
     2521 agcactgatg ctgttaacgg ctctcagctg aaaaccacca acgatgctgt ggcgacgaat
     2581 accaccaata tcgccaataa cacttccaat attgccacta acaccaccaa catctctaat
     2641 ctgactgaga cggtgactaa tcttggtgag gatgcgctga aatgggataa ggacaatggt
     2701 gtattcacgg cagctcatgg caccgagacc accagcaaaa tcaccaacgt taaagatggc
     2761 gacctgacga ctggcagcac cgatgccgtt aacggctctc agctgaaaac caccaacgat
     2821 gccgtggcga cgaataccac caatatcgcc actaacacca ccaacatctc taatctgact
     2881 gagacggtga ctaatcttgg tgaggatgcg ctgaaatggg ataaggacaa tggtgtcttc
     2941 actgcagctc atggcaacaa taccgccagc aaaatcacca atatcctgga cggcacagtc
     3001 actgcaacca gttccgatgc cattaacggt agccagcttt atgacttaag cagcaatatc
     3061 gccacctact tcggcggcaa tgcttctgtg aatactgacg gtgtgtttac cggtccaacc
     3121 tacaaaatcg gtgaaacaaa ttattataac gtcggcgatg cactggctgc gattaactcc
     3181 tcatttagca cgtctctcgg cgatgctctg ctttgggatg ccaccgcagg taaattcagt
     3241 gccaaacacg gtactaatgg tgacgcaagc gtgatcactg atgtcgcaga tggtgaaatt
     3301 tcagactcca gttctgacgc agtaaacggc tcacaactcc acggcgtgag cagttatgtt
     3361 gttgatgcgc tggggggtgg tgccgaagtc aatgcagacg gcaccatcac tgcgccgacg
     3421 tacaccattg ctaatgctga ttacgataat gtcggtgatg ccctgaatgc tatcgatacc
     3481 actcttgacg acgctctgct ctgggatgcg gacgccggtg aaaatggtgc atttagcgcc
     3541 gctcacggaa aagataaaac tgccagtgta atcactaacg tcgctaacgg tgcaatctct
     3601 gctgccagca gcgacgcgat taacggctca caactctata ccaccaataa gtacatcgct
     3661 gatgcgctgg atggtgacgc agaagtcaac gctgacggca ccatcaccgc accgacttac
     3721 accattgcga acgccgagta caacaacgtc ggtgacgctc tggatgcgct tgatgataac
     3781 gccctgctgt gggatgagac tgccaatggc ggtgctggag cctacaatgc cagccatgac
     3841 ggtaaagcca gcatcatcac taatgtcgct aatggcagta ttagtgagga cagtaccgat
     3901 gcagtgaacg gttctcagtt gaatgcgacg aatatgatga ttgagcagaa cacccaaatt
     3961 atcaatcagc tcgctggtaa caccgacgca acctatatcc aagaaaacgg tgcgggtatt
     4021 aactatgtgc gtactaacga cgacggctta gcgttcaacg acgccagcgc acagggtgtt
     4081 ggcgctacag ctataggtta taactctgtc gccaaaggcg atagcagcgt agctattggt
     4141 cagggcagct acagcgacgt tgatacgggt atcgccctag gtagcagctc tgtttccagc
     4201 caagtgattg ccaaaggctc ccgtgacacc agcataacgg aaaatggcgt tgttattggt
     4261 tacgacacca cggatggcga actgctcggt gcattgtcta tcggtgatga cggtaaatat
     4321 cgtcaaatca tcaacgtagc cgatggttcc gaagcccatg acgccgttac ggttcgtcaa
     4381 ttgcagaatg cgattggtgc ggtcgcaacc acgccgacta aatacttcca cgctaattca
     4441 acggaagaag attcactggc agtgggaact gactcgctgg caatgggtgc gaaaaccatc
     4501 gtgaatggcg ataaaggtat tggtatcggt tatggtgcct acgtggacgc gaatgcactt
     4561 aacggcattg ccattggtag caatgcgcaa gtcattcatg tcaacagtat tgcgataggt
     4621 aatggttcta cgaccactcg tggcgctcaa accaattata ccgcctacaa catggacgca
     4681 ccgcagaact ctgtcggtga attctcagtc ggtagtgcgg atggtcaacg tcagatcaca
     4741 aacgtcgcag ctggttcagc ggataccgat gcggttaacg tgggtcagtt gaaagtcact
     4801 gatgagcgcg tagcgcaaaa tacccagagc attactaacc tgaacaatca ggtcactaat
     4861 ctggatactc gcgttactaa tatcgaaaac ggtattggcg acattgtcac caccggtagc
     4921 accaagtact tcaagaccaa caccgatggc gtagatgcca acgcccaggg taaagatagc
     4981 gttgctattg gttctggttc cattgctgcc gctgacaaca gcgtcgcact gggtaccggt
     5041 tccgttgcag aggaagaaaa tacaatctct gtaggttctt ctactaacca acgccgtatc
     5101 accaacgtag ctgccggtgt taatgccacc gatgcggtta acgtgtcgca gctgaaatct
     5161 tctgaagcag gcggcgtgcg ctacgacacc aaagctgatg gttctatcga ctatagcaat
     5221 atcaccctcg gtggtggcaa cggcagtacg actcgtatca gcaacgtctc cgctggcgtc
     5281 aacaacaacg acgcggtgaa ctacgcgcag ttgaagcaaa gcgtgcagga aacgaagcaa
     5341 tacaccgatc agcggatggt tgagatggat aacaaactgt ctaaaactga aagcaagttg
     5401 agcggtggta tcgcttctgc aatggcaatg accggtctgc cgcaggctta tacaccgggt
     5461 gccagcatgg cttctattgg tggcggtact tacaacggtg aatcggcagt tgctttaggt
     5521 gtatcgatgg tgagcgccaa tggtcgttgg gtctacaaat tacaaggtag taccaatagc
     5581 cagggtgaat actccgccgc actcggtgcc ggtattcagt ggtaatgatc cattaagtta
     5641 gtgtgactaa gggcaaacgc caaattgcct gatgcgttac gcgcatcagg caagataagg
     5701 cgctccgggt caacaatcta agggcaattc tctgatgagg attgcccttt tctttaccag
     5761 acatctcccc ccacaagaat tggccctacc aattcttcgc ttatctgacc tctggttcac
     5821 aattccccaa ttaaaactca catcaatatt gccaatacac aacatttagt taaccattca
     5881 ttgtcattat ccctacacaa cacaattggc agtgccactt ttacacaacg tgtgacaagg
     5941 agatgagcaa cagactcatt acacgatgtg cgtggactcc aggagacctg caatgaatct
     6001 ctggcaacaa aactacgatc ccgccgggaa tatctggctt tccagtctga tagcatcgct
     6061 tcccatcctg tttttcttct ttgcgctgat taagctcaaa ctgaaaggat acgtcgccgc
     6121 ctcatggacg gtagcaatcg cccttgccgt ggctttgctg ttctataaaa tgccggtcgc
     6181 taacgcgctg gcctcggtgg tttatggctt cttctatggt ttgtggccca tcgcgtggat
     6241 cattattgca gcagtgttcg tctataagat ctcggtgaaa accgggcagt ttgacatcat
     6301 tcgctcgtct attctttcga taacccctga ccagcgtctg caaatgctga tcgtcggttt
     6361 ctgtttcggc gctttccttg aaggagccgc aggctttggc gcaccggtag caattaccgc
     6421 cgcattgctg gtcggcctgg gttttaaacc gctgtacgcc gccggactgt gcctgattgt
     6481 taacaccgcg ccagtggcat ttggcgcgat gggcattcca atcctggttg ccggacaagt
     6541 aacaggcatc gacagttttg agattggcca gatggtgggg cgtcagctac cgtttatgac
     6601 cattatcgtg ctgttctgga tcatggcgat tatggacggc tggcgcggta tcaaagagac
     6661 gtggcctgcg gtcgtggttg cgggcggctc gtttgccatc gctcagtacc ttagctccaa
     6721 cttcattggg ccggagctgc cggacattat ctcttcgctg gtatcactgc tctgcctgac
     6781 gctgttcctc aaacgctggc aaccagttcg cgtattccgc ttcggtgact tgggggcgtc
     6841 acaggttgat atgacgctgg cccacaccgg ttacaccgcg ggtcaggtgt tacgtgcctg
     6901 gacaccgttc ctgttcctga ccgctaccgt aacactgtgg agcatcccgc cgtttaaagc
     6961 cctgttcgca tcgggtggtg cgctgtatga gtgggtgatc aacattccgg tgccgtacct
     7021 cgataaactg gttgcccgta tgccaccagt ggtcagcgag gctacagcct atgccgccgt
     7081 gtttaagttt gactggttct ctgccaccgg caccgccatt ctgtttgctg cactgctctc
     7141 gattgtctgg ctgaagatga aaccgtctga cgctatcagc accttcggca gcacgctgaa
     7201 agaactggct ctacccatct actccatcgg catggtgctg gcgttcgcct ttatctcgaa
     7261 ctattccgga ctgtcatcaa cactggcact ggcactggcg cacaccggtc atgcattcac
     7321 cttcttctcg ccgttcctcg gctggctggg ggtattcctg accgggtcgg atacctcatc
     7381 taacgccctg ttcgccgcgc tgcaagccac cgcagcacaa caaattggcg tctctgatct
     7441 gttgctggtt gccgccaata ccaccggtgg cgtcaccggt aagatgatct ccccgcaatc
     7501 tatcgctatc gcctgtgcgg cggtaggcct ggtgggcaaa gagtctgatt tgttccgctt
     7561 tactgtcaaa cacagcctga tcttcacctg tatggtgggc gtgatcacca cgcttcaggc
     7621 ttatgtctta acgtggatga ttccttaatg attgttttac ccagacgcct gtcagacgag
     7681 gttgccgatc gtgtgcgggc gctgattgat gaaaaaaacc tggaagcggg catgaagttg
     7741 cccgctgagc gccaactggc gatgcaactc ggcgtatcac gtaattcact acgcgaggcg
     7801 ctggcaaaac tagtgagcga aggcgtgctg ctcagtcgac gcggcggcgg gacgtttatt
     7861 cgctggcgtc atgacacatg gtcggagcaa aacatcgtcc agccgctaaa aacgctgatg
     7921 gccgatgatc cggattacag tttcgatatt ctggaagccc gctacgccat tgaagccagc
     7981 accgcatggc atgcggcaat gcgcgccaca cctggcgaca aagaaaagat tcagctttgc
     8041 tttgaagcaa cgctaagtga agacccggat atcgcctcac aagcggacgt tcgttttcat
     8101 ctggcgattg ccgaagcctc acataacatc gtgctgctgc aaaccatgcg cggtttcttc
     8161 gatgtcctgc aatcctcagt gaagcatagc cgtcagcgga tgtatctggt gccaccggtt
     8221 ttttcacaac tgaccgaaca acatcaggct gtcattgacg ccatttttgc tggtgatgcc
     8281 gacggggcgc gtaaagcaat gatggcgcac cttagttttg ttcacaccac catgaaacga
     8341 ttcgatgaag atcaggctcg ccacgcacgg attacccgcc tgcccggtga gcataatgag
     8401 cattcgaggg agaaaaacgc atgattattt ccgcagccag cgattatcgc gccgcagcgc
     8461 aacgcattct gccgccgttc ctgttccact atatggatgg tggtgcatat tctgaataca
     8521 cgctgcgccg caacgtggaa gatttgtcag aagtggcact gcgccagcgt attctgaaaa
     8581 acatgtccga cttaagcctg gaaacgacgc tgtttaatga gaaattgtcg atgccggtag
     8641 cactggcacc ggtgggtttg tgtggcatgt atgcgcgtcg tggcgaagtt caggcagcca
     8701 aagcggcgga cacgcatggc attccgttta ctctctcgac ggtttccgtt tgcccgattg
     8761 aagaagtcgc gccagccatc aagcgcccaa tgtggttcca gctttatgta ctgcgcgatc
     8821 gcggctttat gcgtaacgcg ctggagcgag caaaagcagc gggttgttcg acgctggttt
     8881 tcaccgtgga tatgccgaca ccgggcgcac gctaccgtga tgcgcattca ggtatgagcg
     8941 gcccaaatgc ggcaatgcgc cgctacttgc aggcggtgac gcatccgcaa tgggcgtggg
     9001 atgtgggcct gaacggtcgt ccacatgatt taggtaatat ctcagcttat ctcggcaaac
     9061 caaccggact ggaagattac atcggctggc tggggaataa cttcgatccg tccatctcat
     9121 ggaaagacct tgagtggatc cgcgatttct gggatggccc gatggtgatc aaagggatcc
     9181 tcgatccgga agatgcgcgc gatgcagtac gttttggtgc tgatggaatt gtggtttcta
     9241 accacggtgg ccgccagctg gacggtgtac tctcttccgc tcgtgcgttg cccgctattg
     9301 cagatgcggt gaaaggtgat atcgccattc tggcggatag cggaattcgt aacgggcttg
     9361 atgtcgtgcg tatgattgcg ctcggtgccg acaccgtact gctgggtcgt gctttcctgt
     9421 atgcgctggc aacagcgggc caggcgggtg tagctaacct gctaaatctg atcgaaaaag
     9481 agatgaaagt ggcgatgacg ctgactggcg cgaaatcgat cagtgaaatt acgcaagatt
     9541 cgctggtgca agggctgggt aaagagttgc ctgcggcact ggctcccatg gcgaaaggga
     9601 atgcggcata gtcgtttgcg
//
LOCUS       DADMIB010000166         9393 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.168, whole genome shotgun sequence.
ACCESSION   DADMIB010000166 DADMIB010000000
VERSION     DADMIB010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9393
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.168"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(312..890)
                     /gene="mocA"
                     /locus_tag="JNZ89_003617"
     CDS             complement(312..890)
                     /gene="mocA"
                     /locus_tag="JNZ89_003617"
                     /EC_number="2.7.7.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor cytidylyltransferase"
                     /protein_id="HAY8937356.1"
                     /translation="MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCS
                     RIILVTGYRGNELHERYVNQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDM
                     PTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMG
                     AHYSVEVENAEIILDIDTPDDFITVQKRYTKI"
     gene            993..1763
                     /gene="yqeC"
                     /locus_tag="JNZ89_003618"
     CDS             993..1763
                     /gene="yqeC"
                     /locus_tag="JNZ89_003618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311776.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium-dependent hydroxylase
                     accessory protein YqeC"
                     /protein_id="HAY8937357.1"
                     /translation="MKSIVDPSALFIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQA
                     SGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFT
                     PEAIDALVQRPECDVILIEADGSRAMPLKAPDEHEPCIPKSSCCVIAVMGGHILGAKV
                     STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQC
                     ENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN"
     gene            1811..3436
                     /locus_tag="JNZ89_003619"
     CDS             1811..3436
                     /locus_tag="JNZ89_003619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF2563 family selenium-dependent molybdenum
                     hydroxylase system protein"
                     /protein_id="HAY8937358.1"
                     /translation="MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSI
                     VGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGM
                     RPRLVLIGAGHINRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAV
                     EALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEE
                     HIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGA
                     GDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSA
                     EAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFT
                     AGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPSNIMGHTTRRVIRAPAAGIMRSNVK
                     LGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSV
                     SDKARAIGGGVLEALMMLMHQGVKATKEVLEVA"
     gene            complement(3477..4409)
                     /gene="arcC"
                     /locus_tag="JNZ89_003620"
     CDS             complement(3477..4409)
                     /gene="arcC"
                     /locus_tag="JNZ89_003620"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HAY8937359.1"
                     /translation="MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIV
                     THGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNVLREELLSRGI
                     NKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVV
                     ASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLA
                     EMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAA
                     ASFARSRAGREALITVLSKAKEGIEGKTGTVICQ"
     gene            complement(4457..5842)
                     /locus_tag="JNZ89_003621"
     CDS             complement(4457..5842)
                     /locus_tag="JNZ89_003621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311773.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-phenylhydantoinase"
                     /protein_id="HAY8937360.1"
                     /translation="MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEI
                     DATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCR
                     LRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKL
                     NDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAE
                     AIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYD
                     TEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCP
                     NGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVV
                     IIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRF
                     LRRKPFVPPVL"
     gene            complement(5895..7106)
                     /locus_tag="JNZ89_003622"
     CDS             complement(5895..7106)
                     /locus_tag="JNZ89_003622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgeY family selenium metabolism-linked
                     hydrolase"
                     /protein_id="HAY8937361.1"
                     /translation="MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHR
                     IKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGME
                     TDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYII
                     EQSGIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPIL
                     GELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGAL
                     DEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEG
                     LFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMY
                     AAIPLSWLATE"
     gene            complement(7164..8360)
                     /gene="dpaL"
                     /locus_tag="JNZ89_003623"
     CDS             complement(7164..8360)
                     /gene="dpaL"
                     /locus_tag="JNZ89_003623"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HAY8937362.1"
                     /translation="MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRP
                     TPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSF
                     EHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAE
                     CIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMR
                     EMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIV
                     NVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRI
                     ISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEG
                     KHAVAP"
     gene            complement(8418..>9393)
                     /gene="ygeW"
                     /locus_tag="JNZ89_003624"
     CDS             complement(8418..>9393)
                     /gene="ygeW"
                     /locus_tag="JNZ89_003624"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="knotted carbamoyltransferase YgeW"
                     /protein_id="HAY8937363.1"
                     /translation="RTRFSYASALNLLGLAQQDLDEGKSQIAHGETVRETANMISFCA
                     DAIGIRDDMYLGAGNAYMREVGAALDDGYKQGVLPQRPALVNLQCDIDHPTQSMADLA
                     WLREHFGSLENLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDL
                     IPDVVEVAKNNAKASGGSFRQVTSMEEAFKDADIVYPKSWAPYKVMEERTELLRANDH
                     EGLKALEKQCLAQNAQHKDWHCTEEMMELTRDGEALYMHCLPADISGVSCKEGEVTEG
                     VFEKYRIATYKEASWKPYIIAAMILSRKYAKPGALLEQLLKEAQERVK"
BASE COUNT         2195 a         2292 c         2461 g         2445 t
ORIGIN      
        1 ttagcttata cagatatcat tgagtgaccg gtgttgagaa atccggtggt ttagggggat
       61 agagcaacaa tcgcaccact cttgccaggt ttggcgggaa atataaaaaa atgtgaggcg
      121 gctcgaaact taagggcttt ttgtgaatga actcacaggt gctaaatgag aattaaaatc
      181 actcctgaaa attattattg ccagcccata tatcactttt tctcttttct caaaatcagt
      241 gattccttat cattatgata aagagtgctg gagggattaa atatttgaac gcaatcgttt
      301 aactacgttt tttaaatttt agtatacctt ttttgcactg taataaagtc gtccggagta
      361 tcaatatcta aaattatttc tgcattttct acttcgacgg aataatgagc tcccataagg
      421 agtgcctgac gcatattggt gatattgggg cgcttgattg cctgcatcag gcatggtttt
      481 gacactaaaa tcggatggcc ggggatgcca ttatggagtg gcagtattgc gccatcattt
      541 cgtaacgacc agatttttct gaaaatatcg atggtgaggg ttggcatgtc accgtgggtg
      601 agaaaacaat gttctgtttg cactgcgggt actgcggcct ttactgatgt tagtaaaccc
      661 tgcgcataat ctgggttgtg gataatagtg atattgctct ggttcacata acgttcgtgc
      721 agttcattac cacgatagcc ggtgactaaa ataattcggc tacaaaactg caacgcattt
      781 ttgatacttg tatcaagaat tgtcccctgt tgccagggta acatcatttt ccattgcccc
      841 attcttgatg ataatccggc agcggtaatt atacagtcga tggctgacat agtggttcca
      901 ttatttatag gggctaataa cgcctgataa ttgcgttact tcctgatgga ttaagttggg
      961 gataatttat cccagagagg tcataaagac tcgtgaaaag tatagttgac ccatcggcat
     1021 tattcattga tttaggtgcg cagaaacgtc ccactgtgat ttctgttgtt ggtgctgggg
     1081 ggaaaaccag cttgcttttt tggctggcag aactgctcca ggctagcggc aggcgtgtgt
     1141 taatcacgac gacaacacat atgtttatgc caacgtctca ctggcccgtg gttttctgtc
     1201 gtgatcccgc catgcttcct catgcgtctc ttacatcccc catttcattt tgttttcaca
     1261 gctggaaagc gaaccaggga aaagtgcagg gatttacgcc agaagcgatt gatgcactgg
     1321 tgcaacgacc agagtgtgac gtaattctca ttgaagcaga tggctcgcgt gcaatgccgt
     1381 taaaagcgcc tgatgagcac gaaccttgca tacccaaaag cagttgctgc gtgattgctg
     1441 tgatgggagg acatattttg ggcgcgaaag tgagcacaga aaatgtccat cgctggtcgc
     1501 agtttgctga tattactggg ttaacacctg atgcaacctt gcaactgagc gatctcgttg
     1561 cgctggttcg ccaccctcag ggggcgttta aaaacgtacc gcaaggttgt cggcgagtct
     1621 ggttcattaa ccgtttttct caatgtgaga atgcgattgc acaaagcgag ctccttcaac
     1681 cgctgcaaca acacgacgta gaggcaatct ggctaggcga tatacaagaa catcctgcaa
     1741 tcgcgcgcag atttgtgaat tagcggcccg ggtattccgg gttactgaaa ggatatccat
     1801 tgaggttggt atgaatattt tcacagaggc tgcaaaactc gaagagcaaa attgtccgtt
     1861 tgcgatggcg caaattgttg atagccgagg ctcgactccc cgccattctg cacaaatgtt
     1921 agtgcgcgcc gatggttcta tcgtcggtac aattggtggc ggaatggttg agcggaaggt
     1981 gattgaagag tcacttcagg cattgcagga acgtaagccg cgattattcc atggacgtat
     2041 ggctcgtaac ggtgcggatg ctgtcgggtc agattgtgga ggtgcaatgt cagtatttat
     2101 cagcgtccat ggtatgcgtc cacgtctggt gttgattggc gcggggcata tcaaccgggc
     2161 gatagcccag agtgccgcgc tattaggatt tgatattgcc gttgccgata tttatcgcga
     2221 aagcctcaat cctgaactat tcccaccatc aaccacgctt ctccatgctg agtcgtttgg
     2281 tgcggcagtg gaagcactgg atattcgccc tgataatttt gtcctgattg ccacgaataa
     2341 tcaggatcgt gaagccctcg acaaactcat tgaacagccc attgcatggt tggggttgct
     2401 ggcaagtcgc cgcaaggttc agcttttcct gcgtcaattg cgtgagaaag gcgtggctga
     2461 agaacatatt gcccgtttac atgcgcccgt tggttacaac ataggtgcgg aaacgccgca
     2521 ggagatcgcc atcagcgtgc tggcagaaat attacaggtg aaaaataacg cgccgggtgg
     2581 gctgatgatg aaaccttctc atccttccgg acaccagctg gtggtgattc gcggtgcggg
     2641 agatatcgcc agtggtgtgg cgctacgtct gtatcatgcg ggttttaaag tgatcatgct
     2701 ggaagtggaa aaaccgacag tgattcgttg taccgtggcg tttgcccagg ccgtgttcga
     2761 tggcgaaatg acggtcgaag gcgtcactgc tcgcctggca accagctctg cggaagcgat
     2821 gaaacttacc gaacgcggat tcatccctgt gatggtagat cccgcctgtt cattgcttga
     2881 tgaactgaaa ccgctttgcg tggtggacgc tattctggcg aaacagaatt tgggaacgcg
     2941 ggcagatatg gcaccagtaa caatcgcgct tgggccgggc tttactgcag ggaaggattg
     3001 tcatgcggta attgaaacaa atcgcgggca ctggctcggt caggtgattt actctggttg
     3061 tgcgcaggag aataccggtg ttcctagcaa tattatgggg cataccaccc gacgggtgat
     3121 ccgtgctcct gctgcaggca ttatgcgatc caacgtgaaa ttaggcgatc tggtgaaaga
     3181 gggcgatgtg attgcctgga ttggtgagca tgaaattaaa gcaccgttga cggggatggt
     3241 gcgtggcttg ttgaacgacg gcctggcagt ggttggtggt tttaaaattg gtgatatcga
     3301 tcctcgtggt gaaaccgctg atttcaccag cgtttctgat aaagcccggg cgattggcgg
     3361 cggcgtactt gaggcgttaa tgatgttgat gcatcagggc gtgaaagcga caaaagaagt
     3421 gctggaagtg gcttaaatga aaatggccgg atggtattac ccacccggcc ttaaaattac
     3481 tgacaaatca ccgttccggt tttgccttca atcccttctt tcgctttgct caatacggta
     3541 atcagtgctt cacgacctgc gcgagagcga gcaaacgagg cggcagcttc cactttaggc
     3601 agcatagaac ctttcgcaaa atgaccttct tcgataaagc gttcagcatc acttaatgac
     3661 aggcgatcga gccactgttc attctcttta ccgaagttaa tggccacttt ttctaccgca
     3721 gtcagaatga tcagcatatc ggcatcaatc atttctgcta aacgggcgct ggcccagtct
     3781 ttatcgataa ccgcgctggc accacgcaga tggttacctt cacgaataac agggatacca
     3841 ccaccgccaa cggtgatcac cacctggcct gcatctacca gagctttaac agtttctttt
     3901 tcaatgatat caaccggttt tggcgaggca acaacacggc gatagccgcg accagcatct
     3961 tctttcagag tgtaaccctg ttttgtcagt tgctctgctt cttgctcggt aaagaacgaa
     4021 ccgatcggct tggtcgggtt gaggaatgcc ggatcgttag cgtcgacttc gacctgagta
     4081 accagcgttg ctacaggttt attaatgccc cgagaaagca gttcttctct taacacgttt
     4141 tgtagatcgt aaccaatata accctggctt aaggcaacac agacagacat cggcagcatt
     4201 ggcgagtgtg cttcagtttt tgcggcagct tcaaaggcct ggttaatcat gcccacctgc
     4261 ggcccgttac catgagtgac gataacttca tgtccttggg caattaaatc aacaattgcc
     4321 tgagaagtaa tttttaccgc tttcatttgt ccggccaggt catcgcccag cgcattcccg
     4381 cccagggcga gaacaatttt cttactcatt tttcctcact catcattctt gattgtgtat
     4441 agatccctga cagtggttag agcacgggag ggacaaacgg tttgcgtcgc aggaaacgac
     4501 ctcgcccggc tttgcctgta aaggtgccgt cacagaaaat cgtttcacca cgggataagg
     4561 ttctgacaat cgcgccctga caggtaaaac cctcccatgg cgagtagtcg gcgttgtcgt
     4621 ggagatggcg atgctgaatt tgttggctct gacgtgggtc gataatcacc acgtcgccat
     4681 cggaaccggg cgctaataat cctttttgcg gccacaggcc aaacagcctg gcgggcattg
     4741 cgctggttaa ttcaacaaag cgttccggtg ttatacgtcc cgtcatcacg ccactggaaa
     4801 acagtaactg catgcggttt tccacaccgg gtaagccatt tgggcagcga ctgaaatcgc
     4861 ctttagaaat ttgcaggcgt tgagccatcg agaaggtgca gtgatcggtc gccaccacgt
     4921 caatcgcacc atcgctgatg ccacaccaca gtttgtcctg ctcgcgtacg ttacgcagcg
     4981 gtgggctaag aatgaacttc atgccatctt ctgtatcgta actgcgttcg tccaacagga
     5041 gatattgtgg gcaggtttca acccagactg gctggtgatt cgcacgggca agacgcagat
     5101 aatccagacc taagccgtta gacaggtgca cgatatagag cggggcgtta ccggcaattt
     5161 gtgccaggtt aatcatgcgg gcgatggctt ccgcttcgca ttccagaggg cgactcaagg
     5221 catgatagcg cggcgcggtt aaccctgcgg cgataaattc cgcccgcttg ctggcgatag
     5281 ccgcatcatt ttccgggtgc acggtggtca gcgcgccgga ttcatgcaag cggcgtaatg
     5341 cctgcaaaac ctcgtcatcg ttgagtttgt attgataggt taaatagagt ttaaaactgc
     5401 tcagtccttc ctcgaccatc atcgggattt cgtcgaggat tgcgtgatta atgtgctgga
     5461 tcacaccgtg aaagctgtaa tcgatgaccg ctttatgggc ggcataacca cgataaacct
     5521 ccagttgatg gcgtaaccga cagccgtttg ggccaaatcc catatggtca ataatggttg
     5581 ttgtaccgcc acacgcagct gcgcgggtac cggtaaaaaa atcatcacaa ctgcgcgcga
     5641 tgccgacatc aatattgaaa tgcgtatgga catccacgcc gcctgggaaa acgtaacagc
     5701 cagtggcatc aatttcttca tacgggagct gcggcgaaat attgttgccc aactggcgaa
     5761 caatcccgct ttcaatcagc aaatcctgtt tggcttgtcc atctgcgtta acgacagtgc
     5821 cgtttttgat caatacgcgc atagcaaact ccaaaaaccc tccggcgaac cggaggggaa
     5881 taagtgaaga gtaattactc tgttgccagc cagcttaacg ggattgcagc gtacatcgcg
     5941 gcacaggtca ccaggtgaga tttccaggtt ttttcgttag gtgcatgcgc ttcaggttct
     6001 ttacccgggc caaagccgat caccggaatg ccgtgacggc ccatgataga tacgccgtta
     6061 gttgagaagg tccacttatc aacaaccggc gctttgccaa acagcccttc gtaggcattc
     6121 accagtgctt taacggtgaa gtgatcttct tccactttcc aggtcgggaa gtagcattcg
     6181 gttgggtaaa ccaggccagt ccaggacgga cggtcgtagt tgtacataga aacaaccgcg
     6241 ttagctttct gtactgcagg cagggcgcgg atttcgtcca gcgcgccttc ccaggtttcg
     6301 ccccaggtca gacggcggtc aatagagacg gcgcagctat ctgctacagc gcaacggctt
     6361 ggggatgtga agaagatttc agaaacggtg agggtgcctt tgccgaggaa ttcgtcataa
     6421 cccagacgtt gggagagttc ttgtaattcg ccaagaatcg gacccatttt gaaaatggcg
     6481 ttgtcaccgc gttctggcgc agaaccgtgg cagctaacac cctgaacatc aatacgaatt
     6541 tccatacgac cgcgctgacc acggtatatc tggcagtcgg ttggttcggt actgaccaca
     6601 aattccgggc gaatgccgga ttgttcaata atgtactgcc agcacagacc gtcgcagtct
     6661 tcttcctgca cagtaccggt aaccagcagg gtatattcat cttccagacc gaggtcttta
     6721 atgattttac cggcataaac catagatgcc atgccgcctt cctggtcgga agtaccgcga
     6781 ccaccgatta gctcatcagt ttccatgcct tcgtacggat cgaagtccca gtttttgatg
     6841 ttgccaatgc cgacggtatc gatatgagcg tccattgcca ccagacgcgg gccgtggccg
     6901 atataaccga gaacgttgcc catcgggtcg atttcaactt tatcgaagcc gactttttcc
     6961 atctcttctt taatacgatg tactacgcgt ttttcgtcgc agctttcact gggaatagca
     7021 accatgtcgc gcaggaagcg agtcatgtcc gcctggtaat cttttgcttt ttcaagaatc
     7081 agtttgaatg gaatattctt agccattatt tttctccaga ttttttactc cccgttttgc
     7141 agggagtagt tccaataggg tgattaaggt gctacagcgt gtttgccttc ccagacaact
     7201 tcgcggtagt gcttcacgtc ggtgtcgcct tcagtactga taaccagcac tacggcatct
     7261 ttgttcagcg ccagtttttc catcaggctt tgacgttgcg ggtgataatg aaccgctgcg
     7321 agaacgccca aaccgacagc gccggattca ccggagatga tgcgcgggtc gttgccgtac
     7381 ggattaccca gcacgcgcat acctaatgcg gcaacgctgt cctggcagga gatgaattgg
     7441 gtggcgcagt tacgtaggat ttcccagccc agcgggttag gttcgccaca ggccaggccc
     7501 gccatgatgg tggccatatc accgccaacg ttgacgatgt cgcctttgac gccggagcga
     7561 taaatacagt cagctttgtc aggttcaaca ataatgctgt gcagattttg cgggctgtag
     7621 acgtcgacca gataacccag cacaccaccg gccattgctc cgacaccggc ttgcagcaga
     7681 acgtgcgtcg gggttacgcc catttcacgc atttgctcga cggcttcatc tgccagggtt
     7741 gcgtagcctt gcatgatcca ggttgggatt ttggtgtaac cttcccatgc cgtgtcctgt
     7801 accacttccc agccgtgctg ctgcgcgtgt tgcatggtca ggcgaacggt atcgtcatag
     7861 ttcatatccg tgacgatgca ctcggcaccg aggttcagaa tggcgtcaac gcgttcctga
     7921 gcagaacctt tcggcatgta aatcaccgca ttctgtccga gttgctgtgc tgcccacgcc
     7981 acaccgcgcc cgtggttgcc gtcggtggtg gtcgcgaaag tcattttttc gccgatggca
     8041 tttttcaggt gctcaaatga cagcgtttcg atatcaagat gatatttttc acacaataat
     8101 tgagcgatgg cgtacgcacc gccaagcatt ttgaaggcgt tcagaccgaa tcgttttgat
     8161 tcgtctttga cgagaatttt cttcacacca aaaaggtttg cgagatcgtc cagcgcacaa
     8221 agcggtgttg ggcgataacc agctattttc tggtggaact ggcgcgccag tttggcctgg
     8281 ctttgcgaaa agagcggtga tgtttcgccg ttgaaaaatt tgttatcggc gatatcaatc
     8341 ttcaatgaga aaacggacat atcctatccc tttggcctct ggaaatagag ggccgaccag
     8401 ctgatcggcc cgaggggtta tttcacgcgt tcttgcgctt ctttcagcag ttgctcgagc
     8461 agtgcaccag gtttggcgta tttacgggac aggatcatcg cggcgatgat ataaggcttc
     8521 cagctggctt ctttgtaggt agcgatacgg tatttttcga atacgccttc agtcacttca
     8581 ccttctttgc aggatacgcc gctgatatca gctggcaggc agtgcatgta cagggcttcg
     8641 ccatcacggg tcagttccat catctcttca gtacaatgcc agtctttgtg ttgcgcgttc
     8701 tgtgccagac actgtttttc cagtgctttt aagccttcgt ggtcgttcgc acgcagcaat
     8761 tcagtacgct cttccatcac tttgtaaggt gcccatgact tcggataaac gatgtctgcg
     8821 tctttgaagg cttcttccat gctggtgacc tgacggaagc taccaccgga ggctttagca
     8881 ttgtttttcg ccacttcaac cacatccggg atcaggtcgt agccttccgg atgggccagg
     8941 gtgacatcca taccgaagcg agtcatcaga ccgatgatgc cttgtggtac agagagcggt
     9001 ttgccatagc ttggagagta ggcccaggtc atggcgattt ttttaccttt caggttttcc
     9061 agtgaaccaa agtgttcacg taaccacgcg aggtcagcca ttgactgagt cgggtggtca
     9121 atatcgcatt gcaggttcac taaagccgga cgctgtggca gtacaccctg cttgtaaccg
     9181 tcatcaagtg cagcgccaac ttcacgcata taggcgttgc ctgcgcccag atacatatcg
     9241 tcgcgaatac caatagcgtc ggcgcagaag gagatcatat tggcggtttc acgcacggtt
     9301 tcgccgtgag cgatttgtga tttgccttcg tcgagatctt gttgtgcaag gccgagcagg
     9361 ttaagcgcgg aagcataaga gaagcgggta cgg
//
LOCUS       DADMIB010000167         9366 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.169, whole genome shotgun sequence.
ACCESSION   DADMIB010000167 DADMIB010000000
VERSION     DADMIB010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9366
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.169"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..631
                     /locus_tag="JNZ89_003625"
     CDS             <1..631
                     /locus_tag="JNZ89_003625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HAY8937364.1"
                     /translation="PQATQKMLDDAFFNVEAWINSELATEFAEQEEIAFTTGDGTKKP
                     KGFLANESTDETDKVRAFGKLQHIVSGDATAVTADAIIKLIYTLRKAHRTGAKFMMNN
                     NSLFAIRLLKDSEGNYLWRPGLELGQPSSLAGYGIAENEQMPDIAADAKAIAFGNFKR
                     GYTIVDRIGTRILRDPYTNKPFVGFYTTKRTGGMLVDSQAIKLLKIAVA"
     gene            680..880
                     /locus_tag="JNZ89_003626"
     CDS             680..880
                     /locus_tag="JNZ89_003626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001735262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937365.1"
                     /translation="MILKQDLKWSPDGMRVEVIRAGEYDDGALPARVQEIALQAGLAE
                     RGTSAKSSKATKEKKATTSKEG"
     gene            883..1206
                     /locus_tag="JNZ89_003627"
     CDS             883..1206
                     /locus_tag="JNZ89_003627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001492759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HAY8937366.1"
                     /translation="MLLTMEEIKAQLRLDEDFDADDRHLQLLACAAQKRTETYLNRKL
                     YAPDETIPDSDPDGLHLPDDIRLGMLMLISHFYENRSSVTEVEKLDMPQSFGWLVGPY
                     RYFPQ"
     gene            1203..1613
                     /locus_tag="JNZ89_003628"
     CDS             1203..1613
                     /locus_tag="JNZ89_003628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000702387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HAY8937367.1"
                     /translation="MKIRQAQTSATYILPDPGELNKRVLIRQRVDMPADNFGVEPQYP
                     VTFRTWAKVIQTSATTWQETAQTGDAITHYITIRYRRGITADYEVVCDDSVYRVKRQR
                     DLNGARRFLLLECTELGECRQSHGGSNGDSLFSR"
     gene            1588..2094
                     /locus_tag="JNZ89_003629"
     CDS             1588..2094
                     /locus_tag="JNZ89_003629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001501060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937368.1"
                     /translation="MATPFFHVDVQQPAEMRFNRARVRRAFVTIGQRHMRDARRLVMR
                     RARSAPGENPGYQTGRLARSIGYMVPRASKKRAGFMTRIAPNQRNGKGNRMISGDFYP
                     AFLFFGVRGGAKRRRSHHRGASGGSGWRLAPRNNFMVETLEKNRSWTRYFLARELRKS
                     LKPERRHR"
     gene            2091..2633
                     /locus_tag="JNZ89_003630"
     CDS             2091..2633
                     /locus_tag="JNZ89_003630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937369.1"
                     /translation="MKLTPVIAALRARCPYFENRVAGAAQFKNLPEVGKLKLPAAYVV
                     PGDDSPGENKSQTDYWQELKEGFSVVVILSNGRDERGQFASYDVVDDVRQMLFKALLG
                     WNPEACGNPITYDGGTLLDLNRHELIYQFDFSVISELTEDDTRQQDDLNSLDELQTLA
                     IDVDYLEPGNGPDGDIEHHT"
     gene            2660..2830
                     /locus_tag="JNZ89_003631"
     CDS             2660..2830
                     /locus_tag="JNZ89_003631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000497758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HAY8937370.1"
                     /translation="MFVKPVKGRSVPDPARGDLLPAEGRNVDENNYWLRREAAGDIRR
                     VNKKVNTDDDKL"
     gene            2814..4310
                     /locus_tag="JNZ89_003632"
                     /pseudo
     CDS             2814..4310
                     /locus_tag="JNZ89_003632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707867.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            4310..4666
                     /locus_tag="JNZ89_003633"
     CDS             4310..4666
                     /locus_tag="JNZ89_003633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8937371.1"
                     /translation="MARIGGTCYFKIDGQQLSLTGGIEVPMNKTVNDDIIGLDGSVDR
                     KETHRAPYVKGTFKVPKNFPVSKITSSDEMTITAELANGQVYVLSSAWLHGEANHNAE
                     EGTVDLEFHGEEGDYQ"
     gene            4666..4935
                     /locus_tag="JNZ89_003634"
     CDS             4666..4935
                     /locus_tag="JNZ89_003634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001526907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HAY8937372.1"
                     /translation="MKELELKKPITAHGETLSVLEFDEPTGKDVRELGYPYQMNQDES
                     VRLLAHVVSKYIVRLAKVPQSSVDQMSPADLNAAAWLVAGFFLQA"
     gene            5077..6912
                     /locus_tag="JNZ89_003635"
     CDS             5077..6912
                     /locus_tag="JNZ89_003635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000807176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY8937373.1"
                     /translation="MAEFELKALITGVDRLSPALSKMQKKIRGFKRQAEEASQGGLAL
                     GGGLAAGLTLSLKSYADQENAATGLKVAMMDANGEVGKSFQDINKLAIGLGNQLPGTT
                     ADFQNMMQMLVRQGIPAENILGGVGKATAYLAVQLKKTPEAAAEFAAKMQDATGTASE
                     DMMGLFDTIQKAFYLGVDDTNMLSFFTKTSSVLKMVNKDGLQAAQSLAPISVMMDQMG
                     MNGESAGNALRKVIQSGLSVKKIRDVNKIMARQKLGVQLDFTDGKGSFGGLDNMFRQL
                     AKLRKLTDVKRTGVLKAIFGDDAETLQVVNALIDKGKDGYDQIQQKMNKQASLNKRVQ
                     AQLGTLSNLWEAMTGTATNGLAAIGGAFSGDAKNITQWLGELGEKFTKFADENPRVIR
                     GVVGLAAGLAILKLGLMGVGGAISIVSRIMSMTPIGMIATAIALAAGLIITNWDVVGP
                     YFKKLWETIGPYFEAGWELLKKVFAWSPLGMVINNWGPVVKWFQDMWDKLKPIIEWFT
                     DSSGDTVDAINSAQWGAGAYDAYGTGIPARGYTPYQAVDPAQSNNASGATGPNPFMIN
                     KASAPKVDGEIKVSFVNSPPGMRVMETRSSGFDVSHDVGYTRFGR"
     gene            6973..8301
                     /locus_tag="JNZ89_003636"
     CDS             6973..8301
                     /locus_tag="JNZ89_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HAY8937374.1"
                     /translation="MTWKDRLQDASFRGVPFKVEEESAGTGRRVETHEYPNRDKPYTE
                     DLGKITFRPSITAYVVGDDCFDQRDRLIDALNKPGPGTLVHPTYGELKVCVDGEVRVS
                     TSKSEGRIVRFDLKFVEAGELSYPTSGAATAQTLMSSCSALDDCISDSFSGFSIDGVA
                     DFVQNDVVGNASTMLGYVSDAMKVVDSAVSDAARLLQGDISVLLPPPSSGKNFVEQVQ
                     KMWRTGKRLYGNASDLVTMIKTLSGVSLGSDLQPRGVWKTDSKTTATATQQRNVVAST
                     LRTTAISEAAYAVTRLPAPTTSAVMQNATVGQSTTPAQSTGWPSVTHPALNNAPAVKN
                     TVDLPTWEELTDIRDTLNTAIDKELSRTTSDALFLALRRVKADLNADINTRLEQSARI
                     IQRTPDEVLPALVLAATWFDNAARDADIIRRNAITHPGFVPVIPLKVPVQ"
     gene            8298..>9366
                     /locus_tag="JNZ89_003637"
     CDS             8298..>9366
                     /locus_tag="JNZ89_003637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate protein"
                     /protein_id="HAY8937375.1"
                     /translation="MNDNVTLRVNGREWNGWTSVRIGAGIERLARDFSVEITRQWPGD
                     EGITTLQPRIKNGSKVEVLIGDELVITGWVEATPVRYDARSVSTGIAGRSLTADLIDC
                     AAEPTQFNGRSLVQIAQALAAPFGIEVVNSGAPSGVIPDVQPDHGETVIEVINKILGQ
                     QQALAYDDPHGRLVIGGIGSTRAHTALVLGENILSCDTEKSIRERFSVYQVAGQRAGN
                     DDDFGEATTTALRARTEDAFIARYRPMYIRQTGQATGAGCIARADFEARKRAARTDET
                     TYVVQGWRQGNGTLWQPNQRVIVFDPVCGFDNTELLVSEVTFTQDQNGTLTEIRVGPP
                     DAYLPEPEAPGARKKKKARVQE"
BASE COUNT         2179 a         2349 c         2818 g         2020 t
ORIGIN      
        1 cccgcaggcc acccagaaaa tgctggatga tgcctttttc aacgtggaag catggatcaa
       61 cagcgagctg gcaaccgaat ttgccgaaca ggaagaaatt gcctttacca ccggcgatgg
      121 taccaagaag ccgaaagggt tcctggcgaa tgaatccacg gatgaaaccg ataaggtccg
      181 ggcgttcggc aaacttcagc atattgtatc cggcgacgcg acggcggtga ccgcagacgc
      241 cattatcaaa ctgatttaca cgctgcgtaa ggcacaccgc accggcgcga agttcatgat
      301 gaacaacaat agcctgtttg ccatccgtct gctgaaagac agcgagggta actatctgtg
      361 gcgtccgggg ctggagctgg ggcagccgtc ctctctggcg ggttacggta tcgctgaaaa
      421 cgaacagatg ccggatatcg ccgctgatgc gaaagccatt gcatttggta acttcaaacg
      481 gggttacacc atcgttgacc gtatcggcac ccgcattctg cgtgacccgt acaccaataa
      541 accgtttgtc ggtttttata ccaccaaacg caccggcggc atgctggtcg attcgcaggc
      601 catcaaactg ctgaagattg cagtggcgta atcactcagg ggcgcggaac cgcgcccctg
      661 ttctgacggg tgaagaatca tgatcctgaa acaagatctg aaatggtcac cggacggtat
      721 gcgtgttgag gtcattcggg ccggtgagta tgacgacggg gcgcttcctg cccgggtgca
      781 ggagattgca cttcaggccg ggttagcaga gcgcggaacc agtgcaaaaa gcagtaaagc
      841 gacaaaagag aaaaaagcca cgaccagtaa agagggctga gtatgcttct gacaatggaa
      901 gagattaaag cccaactccg gctggatgag gatttcgatg ctgatgaccg ccatctgcaa
      961 ctgctggcct gtgcggcaca aaagcggacg gaaacgtatc tgaaccggaa gctctatgca
     1021 ccggatgaaa ccattccgga cagcgatccg gacgggctgc acctgccgga tgatattcgt
     1081 ctggggatgc tgatgcttat cagccatttt tacgaaaacc gctcgtcggt tacggaagtg
     1141 gagaaactcg acatgccgca gagttttggc tggcttgtcg gcccgtacag gtactttccg
     1201 caatgaaaat tcgtcaggcg cagaccagcg caacctacat tctgccggac cccggtgaac
     1261 tgaataaacg cgtcctgatc cgccagcggg tggatatgcc cgcggataac tttggcgtgg
     1321 agcctcaata cccggttacg ttccggacat gggcgaaggt tatccagacc agtgccacca
     1381 cctggcagga aaccgcgcag accggggacg ccatcaccca ttacatcacc attcgttacc
     1441 gccgggggat cactgctgat tatgaggtgg tctgtgatga cagtgtgtac cgggtgaaac
     1501 gtcagcgtga tctgaacggg gcgcggcgct ttctgctgct ggagtgtacg gagctgggcg
     1561 aatgtaggca gagtcacgga ggcagcaatg gcgactccct tttttcacgt tgatgttcag
     1621 cagcccgccg agatgcgctt taaccgcgct cgtgtccggc gggcgtttgt cacgattggg
     1681 cagcgtcata tgcgtgatgc ccgtcggctg gtgatgcgcc gtgcgcggtc ggcaccgggt
     1741 gaaaaccccg gttatcagac cggacgcctg gctcgttcga ttggttatat ggtgccgaga
     1801 gccagtaaaa agcgagccgg ttttatgaca cgcattgccc ctaaccagcg caacgggaag
     1861 gggaaccgga tgatctctgg tgacttctat ccggcgtttc tgttttttgg tgtccgggga
     1921 ggagcaaaac gtcgtcgtag tcatcatcgt ggtgcatccg gtggcagcgg ctggcgactg
     1981 gctccacgta ataacttcat ggtggaaacg cttgaaaaga accgcagctg gacacgctat
     2041 tttctggcgc gggaattgcg taaatcactg aagccggagc gacgacacag atgaaactga
     2101 ctcctgttat tgctgcactg cgtgcccgtt gtccgtattt tgaaaaccgg gttgcaggcg
     2161 cggcccagtt caaaaatctg ccggaggtcg gaaagctgaa actcccggcg gcatatgttg
     2221 taccgggtga tgattctccg ggagaaaaca aaagccagac cgactactgg caggagctga
     2281 aagagggttt ctccgtggtt gtcatactga gtaatgggcg tgatgagcgt ggtcagtttg
     2341 cctcgtatga tgtggtggac gatgtccggc agatgctctt taaggctctg ctgggctgga
     2401 acccggaggc gtgcggtaac ccgattacct atgacggcgg cacgctgctg gatctgaatc
     2461 gtcatgagct gatttatcag ttcgattttt cggtcatcag cgagctgact gaagacgata
     2521 cccgccagca ggatgatctg aacagtctgg atgaactgca aacgctggcg attgatgttg
     2581 attatctcga gcccggtaac gggcctgacg gcgatatcga acatcacacc taaataaccc
     2641 ttccttcctg aggatcctca tgtttgtcaa acctgttaaa gggcggtcag tgcctgaccc
     2701 tgcccgcggc gaccttttgc ccgccgaagg gcgaaatgtt gacgagaaca actactggct
     2761 gcgccgtgaa gcagcgggtg atatccggcg cgtgaataaa aaggtgaaca ccgatgacga
     2821 taagctttaa caccattccg tcgaatacgc tggttccgtt gttttatgcg gaaatggata
     2881 accaggcggc gaatactgca caggacagcg gagcatcgct gctgattggt catgccaata
     2941 acggtgcaga gattgttgcc aacagtctgg tactgatgtc gtcggcagac tatgcacgcc
     3001 agatttgtgg tgcgggaagt cagctggcgc gtatggtcga ggcttatcgc cagactgacc
     3061 cgtttggcga gctgtatgtg attgccgttc ctgaatccac aggtgcggcg gcaacagtta
     3121 cgctgacggt gaccggggcg gcaaccgaaa ccggcacggt gaatgtgtat gtaggacgta
     3181 cccgcgtgca ggcaccggtg actaacggcg ataacgtcac gatgattgcc agcagtatct
     3241 aggatgccat caatgccgtt ccgaccctgc cgtttacggc ttcatcttcg gcaggcgtgg
     3301 tcacactgac cgcgcgtcat aaggggcttt gtgggaatga aattcctgtc agcctcaatt
     3361 actacggctt tggtgggggc gaagtgctgc cagcgggcgt acagattgcc gtggcgacgg
     3421 gtaccgccgg aacgggtgct ccggttctca ccggcgcggt ggctgcaatg gcggatgagc
     3481 cgtttgatta tatcggcctg ccgttcaacg acacggcctc cgttaacacg ctggtgaccg
     3541 agatgaacga taccagcggt cgctggagct atgcgcgtca gctgtatggt catgtgtata
     3601 cggcaaagat cggcacgctg tcagaactgg tgaccgcagg tgaccagttt aaccagcagc
     3661 acattaccct ggcggggtac gaaaaagaga cccagacgcc tgccgacgag ctggcggcaa
     3721 gccgtaccgc ccgcgcagcg gtgtttatcc gcaacgatcc ggcacgtccc acgcagaccg
     3781 gtgagctggt gggtatgctg cctgcgccga aggggaaacg gttcacgatg accgaacaac
     3841 agaccctgct gtctcatggc gtggcaacgg cgtatgtcga aagcggggta ctacgcattc
     3901 agcgtgatgt caccacgtac aggaaaaacg cttacggggt tgcggataac agttacctcg
     3961 acagtgagac gctgcatacc agcgcgtatg tactgcgcaa actgaaatcc gtcattacca
     4021 gtaagtacgg gcgtcacaag cttgccagtg acggtacccg ctttggtccc ggtcaggcga
     4081 ttgtcacccc ggcggtgatc aaaggggaac tgctggcaac ctaccgtcag cttgagcgtg
     4141 cggggatcgt ggaaaactac gaactgttta agcagtacct ggttgtggag cgtgatgcca
     4201 gcgatccgaa ccgcctgaac acgctgttcc cgcctgacta tgttaaccag ctgcgtgtct
     4261 ttgccgtggt taatcagttc cgtcttcagt attcagagga gtctgcataa tggcccgtat
     4321 cgggggaacc tgttatttca aaattgacgg tcagcagcta tcgctgaccg gcggcattga
     4381 ggtgcccatg aacaaaacgg ttaacgatga catcatcggc ctggacggtt cagtggaccg
     4441 caaggaaact caccgtgcgc cttatgtcaa agggaccttc aaggtgccga agaattttcc
     4501 ggtaagcaaa atcacctcgt ctgatgagat gaccatcact gccgagctgg cgaacggtca
     4561 ggtctatgta ctgtcgtctg cctggctgca cggcgaagcg aaccataatg ccgaagaagg
     4621 cacggttgat cttgagttcc acggtgaaga aggggattac cagtaatgaa agagcttgag
     4681 ttaaagaaac cgattactgc tcatggcgag acactctccg tactggagtt tgatgaaccc
     4741 accgggaagg atgtccgcga gctggggtat ccctaccaga tgaatcagga tgagtcagtc
     4801 agacttctgg cgcatgtggt gtcgaaatac attgtgcggc tggcgaaagt gccgcaaagc
     4861 tctgtcgacc agatgtctcc ggcagacctg aatgcagcgg cgtggcttgt ggctggtttt
     4921 ttcctccagg cctgacggct gaatacctca ctgatcgctt ctttgactgc gccagttact
     4981 ggcgcattaa tcctttcgaa ttgctgaata tgccgatcag tgaaattacc ttgctggtca
     5041 gtcaggcaaa caggatagag caggagaaac gcacacatgg cggaatttga gcttaaggcg
     5101 ttgatcaccg gtgtcgacag gctttctccc gcgctgtcga aaatgcaaaa gaaaatccgg
     5161 ggatttaaac gccaggcgga agaagcgtca cagggtgggc tggcgcttgg tggcggactg
     5221 gcagcgggtc tgacgctttc cctgaaatct tatgccgatc aggaaaacgc cgccaccggg
     5281 ctgaaagtcg ccatgatgga tgcgaacggc gaggtcggaa agagctttca ggacatcaat
     5341 aaactggcta ttggcctggg taaccagcta cccggtacaa cggctgattt ccagaacatg
     5401 atgcagatgc tggtgcgtca ggggatcccg gcagaaaaca ttcttggcgg tgtgggtaaa
     5461 gcgacagctt atcttgcggt acaactgaaa aaaacaccgg aagcggctgc tgagtttgct
     5521 gcaaagatgc aggatgctac cggaacggcg tcagaagaca tgatggggct gttcgacact
     5581 atccagaagg cgttttatct gggtgttgac gataccaaca tgttgtcctt cttcactaaa
     5641 accagctctg ttctgaagat ggtgaacaag gacggtcttc aggctgcaca gagccttgcc
     5701 cccatcagcg tcatgatgga tcagatgggg atgaacgggg agtcggcagg taacgccctg
     5761 cgaaaagtta tccagtccgg attaagcgtt aagaaaatca gggacgtcaa taaaatcatg
     5821 gcccgccaga aactcggggt acagctcgat tttactgacg gcaaaggaag ttttggcggt
     5881 cttgataaca tgttcaggca actggcaaag ctgcgaaaac tgaccgacgt taagcgaaca
     5941 ggtgtactta aggcaatatt tggtgatgat gccgaaaccc ttcaggtggt caatgcacta
     6001 atcgataaag gaaaggatgg ctacgatcag atccagcaga agatgaataa acaggccagc
     6061 ctgaataaac gtgttcaggc ccagcttggt acgctgtcca acctgtggga ggcaatgacg
     6121 gggaccgcaa ctaacggcct tgcggctatt ggcggcgcat tttctggtga cgccaaaaat
     6181 atcacgcaat ggctggggga gttaggggaa aaattcacga agtttgcgga tgaaaatccc
     6241 cgggttattc gcggcgtcgt cgggcttgct gccggtcttg cgattctgaa actgggattg
     6301 atgggcgttg gcggtgccat cagtattgtc agcaggatca tgtcgatgac gccgattgga
     6361 atgattgcga cggcgatagc cctggctgcg ggattaatta tcactaactg ggatgttgtc
     6421 ggaccttatt tcaagaagct ctgggaaacc attggtcctt attttgaggc tggctgggaa
     6481 cttctgaaga aggtttttgc ctggtcgccg ctggggatgg taatcaataa ctggggaccg
     6541 gttgttaagt ggtttcagga tatgtgggac aaactgaagc caattattga gtggtttacc
     6601 gacagttccg gtgacacggt cgatgccatt aactctgcgc agtggggcgc gggtgcttat
     6661 gatgcttatg ggacgggaat accggcacgg ggatacacac cttatcaggc ggtagatccg
     6721 gctcagtcaa acaacgcctc cggtgccaca ggcccgaatc ccttcatgat taacaaagct
     6781 tctgcgccaa aagttgatgg tgagatcaag gtctcttttg tgaattcgcc tccgggtatg
     6841 cgggttatgg aaacgcgatc cagcggtttt gatgtcagcc atgatgttgg ctatacgcgc
     6901 tttggcaggt aatgaaaaat taatctgtta atgagtccca ctccggtggg attttttatg
     6961 tacggagttt atatgacgtg gaaagacaga cttcaggacg cgtcatttcg cggtgtgccg
     7021 tttaaggttg aagaagaaag tgcgggaacc ggtcgtcgtg tggaaacgca cgaatacccg
     7081 aaccgcgaca aaccctatac cgaagacctg gggaaaatca ctttccgccc gtccatcaca
     7141 gcttatgtgg tgggagatga ctgctttgac cagcgcgatc gcctgattga cgcgctgaat
     7201 aaacccggtc ccggcacgct tgtccatccg acttacggtg agctgaaagt ctgtgttgac
     7261 ggggaagttc gggtcagcac atcgaagagt gaagggcgta ttgtccgctt tgacctgaag
     7321 tttgtcgaag cgggagaact ctcttacccc acttcaggtg cggcgacggc gcagacgctg
     7381 atgtcatcct gttctgcact ggatgactgc atcagtgaca gcttcagtgg tttcagtatc
     7441 gatggcgtgg cagattttgt gcagaacgac gtcgtcggta atgccagcac aatgcttggg
     7501 tatgtttctg atgcgatgaa agtggtggat tctgccgtat cggatgccgc caggctgttg
     7561 cagggggata tctcggtact tctgccgcca ccatcgtcag gcaaaaattt cgttgagcag
     7621 gtgcagaaaa tgtggcgtac cgggaaacgc ctttatggta acgccagcga cctggtcacc
     7681 atgatcaaaa cgctttccgg tgtcagcctc ggcagcgatc tgcaaccgcg cggcgtctgg
     7741 aaaacggaca gtaaaactac cgccacggcg acgcagcagc gtaacgtggt tgccagcacc
     7801 cttcgtacga ccgcaatcag cgaagcggcg tatgccgtca cacgattgcc tgcgcccaca
     7861 acttccgcgg tgatgcagaa tgccacagta gggcagtcaa caacacccgc gcagagcacc
     7921 ggctggcctt ctgtcacgca tccggcactg aacaatgcac cggcggtgaa aaacacggtt
     7981 gacctgccaa cgtgggaaga actgaccgac attcgcgaca cactgaatac ggcaattgat
     8041 aaggagttgt cccgtacaac cagtgatgcg ctgtttctgg cgctgcgccg ggtgaaagca
     8101 gatctgaatg cggatatcaa cacgcgcctt gaacagtctg cacggatcat tcagcgcacg
     8161 ccggatgagg ttttacccgc gctggtgctg gcggcgacct ggtttgataa cgcggcgcgt
     8221 gacgcggaca ttattcggcg taatgccatt acgcatcccg gctttgtgcc ggtgatccct
     8281 ctgaaggtgc cagtgcaatg aacgacaatg tcacgctacg ggtaaatggc cgggagtgga
     8341 atggctggac atcggtgcgc atcggtgccg gtattgaacg gctggcgcgg gatttcagtg
     8401 tggagatcac tcgccaatgg ccgggagatg agggtatcac cacgcttcag ccgcgcatta
     8461 aaaacggttc aaaagtggaa gtgctgattg gtgatgagct ggtgatcacc ggctgggtgg
     8521 aggcgactcc cgttcgttac gatgcccgtt cggtcagcac cggtattgcc ggacgtagtc
     8581 tgacggctga cctgattgac tgtgcagccg aaccgacaca gtttaacgga cgctcgctgg
     8641 tgcagattgc gcaggcgctt gctgcgcctt tcggcattga ggtggtgaac agcggtgcgc
     8701 cgtcgggtgt tattcctgat gttcagcctg atcacggtga aacggtgatt gaggtaatca
     8761 acaaaatact cggtcagcag caggcgctgg cttacgacga cccgcacggc aggctggtga
     8821 ttggcggtat tggctcaacg cgggcacata ccgcgctggt acttggggaa aacatccttt
     8881 cctgtgatac ggagaagagt atccgggagc ggttttctgt ttaccaggtg gcggggcagc
     8941 gtgccggaaa cgacgatgat ttcggtgagg ccaccaccac cgcgctgcgg gcccgcacag
     9001 aggacgcatt tattgcccgt taccgtccga tgtatatcag gcagacaggg caggccacgg
     9061 gggcaggctg tattgcgcgt gctgactttg aagcccgaaa acgggcggcg cggacggatg
     9121 aaaccaccta tgtggtgcag ggctggcgac agggtaacgg tacgctgtgg cagcccaacc
     9181 agcgggtgat tgtcttcgat ccggtctgtg gtttcgacaa taccgaactg cttgtctcgg
     9241 aagtcacgtt tactcaggac cagaacggca ccctgacgga aatccgtgtc ggcccgcctg
     9301 acgcttatct gcctgaaccc gaagcccccg gcgcgcggaa aaagaaaaaa gccagagtac
     9361 aggagg
//
LOCUS       DADMIB010000168         9170 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.170, whole genome shotgun sequence.
ACCESSION   DADMIB010000168 DADMIB010000000
VERSION     DADMIB010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9170
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.170"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..198)
                     /locus_tag="JNZ89_003638"
     CDS             complement(<1..198)
                     /locus_tag="JNZ89_003638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8937376.1"
                     /translation="MKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALARQNENHE
                     AGNKYIPYGKMASWLVEWKNAT"
     gene            206..637
                     /gene="tnpA"
                     /locus_tag="JNZ89_003639"
                     /pseudo
     CDS             206..637
                     /gene="tnpA"
                     /locus_tag="JNZ89_003639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313209.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            697..771
                     /locus_tag="JNZ89_003640"
                     /pseudo
     CDS             697..771
                     /locus_tag="JNZ89_003640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709516.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(768..2091)
                     /locus_tag="JNZ89_003641"
                     /pseudo
     CDS             complement(768..2091)
                     /locus_tag="JNZ89_003641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312649.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-alpha-glucosidase"
     gene            complement(2091..3707)
                     /locus_tag="JNZ89_003642"
     CDS             complement(2091..3707)
                     /locus_tag="JNZ89_003642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312650.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HAY8937377.1"
                     /translation="MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTD
                     PNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFI
                     NAMGMIWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDK
                     KLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGGWV
                     YTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGG
                     FALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFI
                     SPLLFAVHAVLAASMSTVMYLFGVVGNMGGGLIDQVLPQNWIPMFSNHADMMLTQIAI
                     GLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQA
                     AGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVII
                     GLHVSQLREQLDSLINSHQSAENVAITEAV"
     gene            4003..4719
                     /locus_tag="JNZ89_003643"
     CDS             4003..4719
                     /locus_tag="JNZ89_003643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY8937378.1"
                     /translation="MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRK
                     AIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMP
                     APPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEY
                     IEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMF
                     RNASEYQVEYHLRRLHPEKS"
     gene            complement(4716..6377)
                     /locus_tag="JNZ89_003644"
     CDS             complement(4716..6377)
                     /locus_tag="JNZ89_003644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HAY8937379.1"
                     /translation="MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVG
                     HFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
                     IGGLVTAILHKLFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSY
                     AMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHD
                     LAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQ
                     EVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGD
                     ISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVP
                     GFPAALKLGLAGGPLIMALILGRIGSIGKLFWFMPPSANLALRELGIVLFLSVVGLKS
                     GGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPP
                     ALAFANNLHPTSGAPALSYATVYPLVMFLRIITPQLLAVLFWSIG"
     gene            complement(6573..7001)
                     /gene="ibpB"
                     /locus_tag="JNZ89_003645"
     CDS             complement(6573..7001)
                     /gene="ibpB"
                     /locus_tag="JNZ89_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709512.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpB"
                     /protein_id="HAY8937380.1"
                     /translation="MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNH
                     YRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAEN
                     MEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS"
     gene            complement(7113..7526)
                     /gene="ibpA"
                     /locus_tag="JNZ89_003646"
     CDS             complement(7113..7526)
                     /gene="ibpA"
                     /locus_tag="JNZ89_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpA"
                     /protein_id="HAY8937381.1"
                     /translation="MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDE
                     NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
                     ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN"
     gene            7832..8164
                     /locus_tag="JNZ89_003647"
     CDS             7832..8164
                     /locus_tag="JNZ89_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418143.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HAY8937382.1"
                     /translation="MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATM
                     IGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSHVEKSEANAQATNAVI
                     PPARMPDN"
     gene            complement(8166..>9170)
                     /locus_tag="JNZ89_003648"
     CDS             complement(8166..>9170)
                     /locus_tag="JNZ89_003648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418144.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3748 domain-containing protein"
                     /protein_id="HAY8937383.1"
                     /translation="PKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDI
                     TAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQ
                     KQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKV
                     PELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPR
                     HWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWL
                     GFVLDNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMEGGQLWITETDR
                     "
BASE COUNT         2337 a         2413 c         2286 g         2134 t
ORIGIN      
        1 agtggcattt ttccactcaa ccagccagga agccattttc ccgtaaggga tgtatttatt
       61 accggcctca tgattctcat tctgacgtgc cagagcacga ttgaaaacga aacgacatgc
      121 gcctgcgaag cgcctcattt cacgctcctg ttgaccaccg ggtcttaact ggaatttaaa
      181 tgcttgtagt cgtttcacag gccaaatgat actttggtct gtgaaaaaag aaaccgatat
      241 ccggcgtgga aggcattgtg ttttcctgat gcatgttcac ctggtctttg tcaccaaata
      301 ccgacgtcag atttttgact atgacgcgac agaaaaacta cgcacttact tttcaaatgt
      361 atgtgctgat tttgaagctg aactggttta aatggatggc gaaccagatc acgtccattt
      421 gttaattaac tatcctccca aactggcgat atccagtctg gtaaacagcc tcaaaggcgt
      481 atcgggtagg ttactgcgac gagatcgacc agatattgca gtcaggtatt actacaaagg
      541 cgttttgtgg agtcctggct attttgccaa tagctgcgga ggtgcgccaa tatccgtcat
      601 ccgccaatac attgaacaac agcaaacacc tggttaggtg gaaaaccgcg ccttatatcc
      661 ccgccctgaa ggacggggtt ttacggcgca ccggataaat ttggttatgc gccgtcagcc
      721 gtgctaaaga atacggacca gcacccaacg gatgccagtc cacacaatta acgtaactct
      781 ggccagtacg ctttgttggc ctccagcaac tcatccagaa tagctttggc gaccgaggcg
      841 ctcggtaccg ttttcgataa cgtaatcgcc tgccacaggt gctgatatga acgctgttcc
      901 caggcgtcca cgaccagttt ttccaccgcc acttgctgac tcattaaccc tttctgaaac
      961 tgcgggatat cgccgaccac cagtggttct ggtccgttgt gcccgaccag acacgggatc
     1021 tcgaccatcg cttcatcatc aaagttatgg attgccccgt tgttaggcac aatcagcaac
     1081 atccgctcct gagtgttgaa ggcaattgcc gccgccagat cgacgatgta tgacgcatgt
     1141 tcgtcaatct ccagcttggc cgccgctgaa tttcctgccg ctgtaatggc gcggcaagca
     1201 tcgaaaacct gtttctcgcg atgttccatt cacctcattc gcgcgggtat gttcagggtt
     1261 ggaatgctga acaacataat ccgggaagag ataatatttc agataggtgt tcggcaatgt
     1321 atccgggtcc agtgcctgga catcccgcgc ttttgcatag gtgtcgttcc agctcgcttc
     1381 agtatgtgta tcttgctgcg gtggaacata accgtgctta gagacatatt gccgcagctg
     1441 gggcatcagg tcgttgccct gcaaatcttc aattgatgtc caccagccaa agtggttcag
     1501 gccgtagtag cgcacgcgca tctgtttgcg atcttgcagc ccaacaattt gcgccatccg
     1561 gctttcaata ccgattggca tgtcacagat gttgaggatt ttcgcattcg ggcgcagacg
     1621 acgcgtggct tctgcgacaa ttgctgccgg gttggagtag ttgagcatcc aggcatttgg
     1681 tgaatatttt tccatataat ccaccagttc caggacgccg ccaatggaac gcatgccgta
     1741 cgctattccg ccgggtccgc aagtttcctg accaacaacg ccgtggcgca gcgggatttt
     1801 ttcatccagt tcgcgcatcg ggtatttgcc gacgcggatg tgcgccatga caaaatcaac
     1861 gtcgctgaat gccacttcag gatcggtggt gtaactaaac gcaatgtccg gcgctttctc
     1921 tttaaggatg actttacagg cttcggcaat cacttcctgc cgcgcaccat cgttatcata
     1981 aaatttcagt gcacgaagcg ggaaacggtc ctgattcgcc aggagcatca acacgatgcc
     2041 tggcgtaaag gtgcttccac cgcctgcgac aaccactgag aatttggtca ttatactgcc
     2101 tccgtaatgg caacattttc tgctgattga tgagaattaa ttaagctatc gagctgttca
     2161 cgcagctggg atacatgcag accaatgatc acctgaatgg catcgccact acggaagacg
     2221 ccgtgcgctc ccagcttttt aaagacttcg tcatccagcg tttgtgacat gtcatgcagt
     2281 gcaatacgta aacgcgtcgc gcaattgtta atgctggaga tattgccgac cccgcccagg
     2341 gcttgcagga taccggcagc ctgatccagc tctttttttg gctctgcagc ggtggtttgg
     2401 cctcgcgagg ctttgtattc ggcttttgag tagagtttca cttccgcatc ttcacgtccc
     2461 ggcgtgcaca tgttgaattg cagaatcagt gtgcggaaaa ccacgaagta cagcagggta
     2521 aagcacaacc caatggcgat ttgggtcagc atcatatccg cgtggttgct gaacatcggg
     2581 atccagtttt gcggtaaaac ctggtcaatc agacctccgc ccatgttgcc caccacacca
     2641 aagagataca tcacggtcga cattgaggcc gccagcacgg cgtgtaccgc aaacagcaac
     2701 ggtgaaatga acaggaaggt aaattccagc ggttcggtaa ttcccaccag catggcggtt
     2761 aaggttgcgg gaatcagcaa gcccgccact tttacccgat tttccggtgc ggcagtgaag
     2821 tacatcgcta aagaaatgcc cacggcacca aagatttttg agttaccgtg cagggcaaaa
     2881 ccgccttccg ggaacaacga tttcagcggc tcggcgctca gactgaactc ttgcagatgc
     2941 tgcgcccagt acatctgaat gccgccttca acagctgccg gaccaaagat aaactgtccg
     3001 tagatgaagt ggtgtaaacc ggttgggatc agaatacgtt cgaggaaggt gtaaacccac
     3061 cccccaagcg cacccgccga acgcaggaac gcttgcagag attcaatccc catttgtact
     3121 tttggccaac cgagcaacgt cagccaggca caggggatca tcaccaggaa ggcgataatc
     3181 accacataag acgtcccctg gaaaatgccg agaaaaaccg gcagtttttt atcgaacaga
     3241 cggttatgca gcgccgtcac aatgccggaa atgataattg cgccgataat gctggtatcg
     3301 agggttttaa tcccggccat cattgtcaga ccgctacctg ccaccgcgtc ctgagtgaaa
     3361 tcgacgccga agtagcttcc ccagatcatt cccatcgcgt tgatgaaata gttccaggtc
     3421 aggaaactca ccatcaccgc cagacaagca cgcccctgcg cttgcttagc aaggccaatg
     3481 ggtaaaccga cagcaaaaat cagcggcata ttacggaata ccgtccaacc gccctcttca
     3541 ataatgtgta cgatttgcgc gaataaactg ttcggatcgg tcagtgattc cccgacaaac
     3601 atcgggtttt gcagcaagat ggcaagaccc accacaatcc cggcgaaggg aaacagcagc
     3661 actggcgtga acatcgcgcc gccaaagcgt tgaatttgac tgagcatttc cacattctct
     3721 tttctcaatt ctgtaagtag gaagcctgat tggttatgcg gcaggcctgg agcgaggata
     3781 ggaagatgcg atcggcagaa catgacgacc caatgggatt cgtgatcgct ttcatgcttt
     3841 tcgttgggcg gtagagatct acgttttcgc gaaaaagtag acatctgtga gcactggtac
     3901 acagcatcga acacatcttt aaaaaaaaga tgttttttca atcgattaag cagaacttgt
     3961 gggcgcatta cccgggcttg caggcaaaaa agagatctag agatgatcta caaaagcatt
     4021 gcggagcggt taagaattcg acttaattcc gcggatttca cgctaaacag ccttcttccc
     4081 ggtgaaaaaa agttggcgga agaatttgca gtatcccgga tgaccatccg taaagcgatt
     4141 gacctgctgg tagcgtgggg gctggtggtc cgccgccacg gcagcggcac ttacctggtg
     4201 cgcaaagatg tgctgcatca aaccgccagc ctgaccggac tggtggaggt gttaaaacgg
     4261 cagggaaaaa cggtcaccag ccaggtgctg atttttgaaa tcatgcctgc gcctccggcc
     4321 attgccagcc agttacggat tcaaatcaac gagcagatct acttctcccg tcgcgttcgt
     4381 tttgtggaag ggaaaccgct gatgctggaa gacagctata tgccggttaa actgttccgt
     4441 aatctttcgc tgcaacatct ggaagggtcg aagtttgaat atattgaaca agagtgtggg
     4501 attttgattg gcggtaatta tgaaagcctg acgccggtgc tcgccgatag actgctggcg
     4561 cggcaaatga aggtagcgga acacacgcca ctgctgcgga tcacctcgtt gtcatatagc
     4621 gagagcgggg agtttttgaa ttattcagtg atgttcagaa atgccagcga ataccaggtg
     4681 gagtaccatt tacggcgact ccacccggaa aagagttaac cgatactcca gaagagcacc
     4741 gccagtaatt ggggggtgat aattcgcaga aacatcacta acggatagac agtggcgtaa
     4801 gagagcgccg gcgcaccact ggttggatga agattattag caaacgccag cgccggagga
     4861 tcggtcatgg aacctgccag catcccgcac atggtcaggt aattcatttt ggctaacatc
     4921 cgcgccagaa tgccaacagt aatcagcgga acggcggtga tcagggcacc ataaccaatc
     4981 cagcttagcc cttcgccatt gaccagggta ttcacaaaat ccccaccaga tttcagacca
     5041 acgaccgaga ggaacagcac gatccccagc tcccgcagcg cgaggttggc acttggcggc
     5101 ataaaccaga acagcttgcc gatactgccg atacgcccga ggatcaacgc cataatcagc
     5161 ggaccgcccg ccagccccag tttcaacgcg gccgggaacc caggcacaaa gacgggaata
     5221 gaacctaaca atacgccaag cccgatgcca ataaacactg gcagcatctg aacctgttgc
     5281 agtttttgct gcgcattccc cagcacattg gcaacggcat caattgcgga cggacgcccc
     5341 accagattga ggatatcgcc gaactgcagg ctgatatcgc cactggcgac cagttcgacc
     5401 ccggcacggt tcaggcgcga gataacaacg tcatagcgtt ctttaaagtg caggtcgcga
     5461 atacgttttc cgagcacgtt ttcattggtg accaccacac gctcgacgcg caaatcagtg
     5521 cctttcgtgg acagcgaagt atcgacctcc tgaccaatca ccagttgcgc attatgtaaa
     5581 tccgctggct gccccaccag atgcagcaaa tcgcccagtt ggataatggt atctggcgaa
     5641 ggaactttta gggtttcttc gcgtttcaga cgcgagcaga taattttgtc gccgttgaga
     5701 atcggtacat ctttaatagc taaatcatgc aggttagggt tctcaacgcg aatattgata
     5761 gtcttgatca gcgcgccgcc attggtgcgt gaagactcgt gctgctgagc ttctgtctcg
     5821 acattgacgc ggaaaataac ccgcaacatc cacatggtga acaaaatccc gcaaatgccg
     5881 aatggatacg ccatcgcgta actcatcccc atctgatcga ccatttccat tggtgtaccc
     5941 aggtcgcgca agatctgctg ccctgccccc agcgctggcg tattggtaac cgcaccggag
     6001 aaaatcccca gcactaccgg cagtggaata tcaaacagtt tatgcaggat ggcggtaacc
     6061 agaccaccga tgatgacgat cagaacagca aacaggttga ggcgtaatcc ggagacgcgc
     6121 aatgaggcaa agaagcccgg ccctacttga atcccgatgg tataaacgaa caggatcagg
     6181 ccaaattcct gaataacatg cagcatatcg ctacttaatg tcatccccgc ctgagaaaca
     6241 aaatggccga cgatgatccc accaaacagc acgccgccaa tacctaatcc tatgccgcga
     6301 aatttgacgt tgccgataaa caaaccgacg actgccacca aagccagaat actgaccgtt
     6361 aatgctatat cactcatcgt ccatttctct tgagataaca ttttaattgc tacggattat
     6421 ggctgaatcg gtgaagcaga tttgccttat agcgcacatt atcacgggaa agaacgtgcc
     6481 gaaatatctt aaacagtcga aatttaacgc attgttgaag aagaaagaca aaaaaagccc
     6541 caccagaatg gcggggcaaa gagaatagct agttagctat ttaacgcggg acgttcgctg
     6601 atagcgatac gctgcgctgc gatgggttca ggctcattac gaattaaatc aatatgcagt
     6661 aaaccgttta cgaaggttgc gccagagact tccatatttt cagccagcgt aaagctcagg
     6721 ctaaatggct gattcataag cccttgatgc agccattttt tctcttcttt tggctgctcc
     6781 ggcgtgcctt ttacgctcag gcgcgtacct tccagttgaa tctctaaatc ttcctgacgg
     6841 aaacctgcca gcgcaagggt aatgcggtag tggttatcgt cgcttttctc aatgttgtac
     6901 ggcgggaagc tctggctttc accggcgttt tgcagtgcgt tggccagttt gtcaaaaccg
     6961 atccattgac gcatcagtgg ggataaatcg aagttacgca tagtcatttc tccttctaag
     7021 aagcgagtaa gtacctgcaa atccgaagat tcgcatatgc tccctgacgg cgagcatgga
     7081 gatgtcaggc cgcgtcaggc ggccttaggg aattagttga tttcgatacg gcgcggtttt
     7141 ttcgcttccg gaatcacgcg ttcgagatcg atatacagca aaccatttac caggttagcc
     7201 ccacgaacat gaatgttctc agctaactgg aatttgcgtt caaagttgcg ttcagcgatg
     7261 ccctggtaca gataggtgcg ctctttttgt tcgtcggcgt gagcaccttt caccaccagc
     7321 agattatcct gggcggtaat ttccagttcg ctctcagcaa aaccagccac agcgatagca
     7381 atgcggtaat ggttttcgtc taccagttca acgttatacg gagggtagcc gccattactc
     7441 tggctctggt tgttttctaa gtggttaaac aaacggtcaa atccaatagc agaacggtaa
     7501 agcggggata aatcaaagtt acgcataatc aatagctcct gaaatcagcg agaatgtaat
     7561 accttccaca atggacaggt caggtagcca gaacacccat caggcgcgtc ctcatcggct
     7621 acgatgtaaa aatgggtctg gaaatgaact tttcaagcct tatcagcgga cttttttttg
     7681 cagtttatgg tctattgcat agactgaggg ggcagcacga aacgttaaag tgcgatagcc
     7741 gccacagtgc gacgtaatga tgatgttatt ttcagcaagg gatcgctata actcatcagg
     7801 ccaacaccca cgatcaacag atgaatttat tatgataaga aatgtgttgt tagcgttcat
     7861 gatatgcagc ggaatgacat tactcggagg atgctccagc gtgatgtccc ataccggagg
     7921 gaaagaagga acgtatcccg gcacccgcgc cagcgcaacc atgattggcg acgatgaaac
     7981 caactggggc actaagtcgc tggcgattct cgatatgccg tttaccgctg tgatggacac
     8041 gcttttactg ccgtgggatg tgttccgcaa agacagctcg gtgcgctcac acgttgaaaa
     8101 aagcgaagcc aacgcgcaag ccaccaatgc ggttattcca ccggccagaa tgcctgataa
     8161 ctgatttagc gatcagtttc ggtgatccac agctggccgc cttccatcca cgccagccat
     8221 tgaccatccg gcgagaagac cacggcgtcc gcagaaggtg gattggcgtg gttttcggtt
     8281 aaatactcaa cctcgccact ttgcgcatgg gcacaagcaa ttcgattatc cagcacaaag
     8341 cccaaccatt ctcctgacgg atgccagtta aatgcagact gaatatccgt tttgttatgg
     8401 gttaactggc gcggctcgcc gccctgtggc gagataagcc acagttgcac aatgccgtta
     8461 tcatcacgca ttaaaaacgc gatttgcgta ccctgcggat tacagcgcac ccagtggcgc
     8521 gggacgttga ctaaccccgg ataagcccga tggtgggtaa aggttaaacg tcgctgcacg
     8581 acgccgcgcg gtggcgcggg cagggtggtt tccgttccac ttaacggcgc atcacctgcc
     8641 gctttccagc cagcttcatc ttgcggtaac tcaacgataa acagctccgg cactttctcg
     8701 ccctttggcg aaagtgtgtc gccaataaac gccagcgcgt gatttcctac ccatccttct
     8761 tcataagcac gattgatttc atcgctgcca ggctgcggcg tgggcgtggt tttactcacc
     8821 agcacgcacc agtggctacc gctgtattca cgcggatgct gcttttgtac gttgaccggg
     8881 ccaaacggcg cagcaacacc gacgtttcgc aaatccagcg ccggatcgag ttcatgcatt
     8941 acatggtcgt tataggtaaa gctcaccctt tcaccgttcg ggctaaagac atgcacatgg
     9001 ctgccgccgc gcagcgctcc tggcgtatac ggcgcggtaa tatccattgc atcgagattg
     9061 ctcaccttgc cgccttcagc aatgactccg cgtcgatgat ggaaatcgta ataccatgtt
     9121 tcatcaggat tttccgggcc atggatgaaa acatatttct ctgacttcgg
//
LOCUS       DADMIB010000169         9147 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.171, whole genome shotgun sequence.
ACCESSION   DADMIB010000169 DADMIB010000000
VERSION     DADMIB010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9147
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.171"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..866
                     /gene="maeB"
                     /locus_tag="JNZ89_003649"
     CDS             <1..866
                     /gene="maeB"
                     /locus_tag="JNZ89_003649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HAY8937384.1"
                     /translation="IGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFKEYWTEYFQ
                     IMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSVVKNVFGYR
                     DGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFGIEPRVALL
                     SHSNFGSSDCPSSSKMRQALELVRDRAPDLMIDGEMHGDAALVEAIRNDRMPDSPLKG
                     SANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASVRRIVNMVA
                     LAVVEAQTQPL"
     gene            1158..1493
                     /gene="eutS"
                     /locus_tag="JNZ89_003650"
     CDS             1158..1493
                     /gene="eutS"
                     /locus_tag="JNZ89_003650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HAY8937385.1"
                     /translation="MDKERIIQEFVPGKQVTLAHLIAHPGEELAKKIGVPDAGAIGIM
                     TLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLN
                     YTLCEMTKS"
     gene            1506..1985
                     /gene="eutP"
                     /locus_tag="JNZ89_003651"
     CDS             1506..1985
                     /gene="eutP"
                     /locus_tag="JNZ89_003651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutP"
                     /protein_id="HAY8937386.1"
                     /translation="MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDT
                     PGEYFSHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTD
                     MPDADVAATRKLLLETGFEEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE"
     gene            1960..2661
                     /gene="eutQ"
                     /locus_tag="JNZ89_003652"
     CDS             1960..2661
                     /gene="eutQ"
                     /locus_tag="JNZ89_003652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutQ"
                     /protein_id="HAY8937387.1"
                     /translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT
                     ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ
                     SLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAG
                     FMQWENAFFPWTLNYDEIDMVLEGVLHVRHEGQTMIAKAGDVMFIPKGSSIEFGMTSS
                     VKFLYVAWPANWQSL"
     gene            2658..3467
                     /gene="eutT"
                     /locus_tag="JNZ89_003653"
     CDS             2658..3467
                     /gene="eutT"
                     /locus_tag="JNZ89_003653"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001425897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization cob(I)yrinic acid
                     a,c-diamide adenosyltransferase EutT"
                     /protein_id="HAY8937388.1"
                     /translation="MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLR
                     IKFIDEQGRLFVDDEQQKPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKM
                     VAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGC
                     QAIVGLSDEDLHRLSHQPLRYLDHDHLVLEASHGRDAALLNLLRTKVRETETVAAQVF
                     ITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGERNDY"
     gene            3457..4473
                     /gene="pta"
                     /locus_tag="JNZ89_003654"
     CDS             3457..4473
                     /gene="pta"
                     /locus_tag="JNZ89_003654"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HAY8937389.1"
                     /translation="MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPIL
                     VANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTD
                     PLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSFIFLMLPQYSGP
                     ALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANV
                     QQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIG
                     YNIAQRLGGYRAVGPLIQGLAVPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQ
                     TLVE"
     gene            4512..4805
                     /gene="eutM"
                     /locus_tag="JNZ89_003655"
     CDS             4512..4805
                     /gene="eutM"
                     /locus_tag="JNZ89_003655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutM"
                     /protein_id="HAY8937390.1"
                     /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAM
                     VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL"
     gene            4912..5199
                     /gene="eutN"
                     /locus_tag="JNZ89_003656"
     CDS             4912..5199
                     /gene="eutN"
                     /locus_tag="JNZ89_003656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutN"
                     /protein_id="HAY8937391.1"
                     /translation="MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAI
                     DNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK"
     gene            5211..6614
                     /locus_tag="JNZ89_003657"
     CDS             5211..6614
                     /locus_tag="JNZ89_003657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HAY8937392.1"
                     /translation="MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAK
                     VAQQGLKSVAMRQLAIAAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTP
                     GVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAP
                     HPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGE
                     AVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLI
                     VVDSVADELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIA
                     AAIGLNVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHH
                     TAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR
                     TFVRLRRCVLVDAFRIV"
     gene            6625..7461
                     /gene="eutJ"
                     /locus_tag="JNZ89_003658"
     CDS             6625..7461
                     /gene="eutJ"
                     /locus_tag="JNZ89_003658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HAY8937393.1"
                     /translation="MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSM
                     VVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPP
                     GTDPRISINVLESAGLEVSHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVT
                     YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIE
                     GQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLY
                     AK"
     gene            7535..9073
                     /locus_tag="JNZ89_003659"
     CDS             7535..9073
                     /locus_tag="JNZ89_003659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005147267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HAY8937394.1"
                     /translation="MTLCGPGSVSSCGQQAQTRGLKHLFVMADSFLHQAGMTAGLTRS
                     LAVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLDAAKAVALLVT
                     NPDSTLAEMSETSVLQPRLPLIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVL
                     SDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSA
                     RLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFN
                     IPTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEF
                     NRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPE
                     YLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYI
                     MGMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDP
                     SLFF"
BASE COUNT         2098 a         2381 c         2717 g         1951 t
ORIGIN      
        1 ttatcggtcg tccgaacgtg atcgaaatgc gcattcagaa actgggcttg cagatcaaag
       61 cgggcgttga ttttgagatc gtcaataacg aatccgatcc gcgctttaaa gagtactgga
      121 ccgaatactt ccagatcatg aagcgtcgcg gtgtcactca ggaacaggcg cagcgggcgc
      181 tgatcagtaa cccgacagtg atcggcgcga tcatggttca gcgtggggaa gccgatgcaa
      241 tgatctgcgg tacggtgggc gattatcatg aacattttag cgtggtgaaa aatgtctttg
      301 gttatcgcga tggcgttcac accgcaggtg caatgaacgc gctgctgctg ccgagtggta
      361 acacctttat tgccgatacc tacgtcaatg acgaaccaga cgcagaagag ctggcggaga
      421 tcaccttgat ggcggcagaa actgtccgtc gttttggtat tgagccgcgc gttgctctgt
      481 tgtcgcactc caactttggt tcttctgact gcccgtcgtc gagcaaaatg cgtcaggcgc
      541 tggaactggt cagggatcgt gcgccagatc tgatgattga tggtgaaatg cacggcgatg
      601 cagcgctggt ggaagcgatt cgcaacgacc gtatgccgga cagccctttg aaaggttctg
      661 ccaatattct ggtgatgccg aacatggaag ctgcccgcat tagttacaac ttactgcgcg
      721 tttccagctc ggaaggtgtg actgtcggtc cggtgctgat gggcgtggcg aaaccggttc
      781 acgtgttaac gccgatcgca tcggtgcgtc gtatcgtcaa catggtggcg ctggccgtgg
      841 ttgaagcgca aacccaaccg ctgtaattct tttttaactc tcacgcttac cctgaatatt
      901 cagggtaagc ggtttggctg caatatatta gtaaagctta ttactgagtt tgcgaataat
      961 aaaaaagcag tctatataat atctcgatat tattttattt atattcatgc gttgcatatg
     1021 aaagtttatg caccacagcg aatatctctc cattcttagt gatctacctc accttttaaa
     1081 cgcgcttgcc gaattttgtt atttactctg acgaaaaatt gtcacgatac acgaaagttt
     1141 ttcacaggcg gcgactcatg gataaagaac gcatcattca ggaatttgtg cccggcaaac
     1201 aggtcacact ggcgcatctc atcgcgcatc ccggtgagga actggcgaag aaaatcggcg
     1261 ttccggatgc gggcgcaatt ggcattatga cgctaactcc cggcgaaacg gcgatgatcg
     1321 ccggtgattt agcgctgaaa gccgctgatg tgcatatcgg ttttctcgac cgcttcagcg
     1381 gtgcattggt gatttatggc tcggtgggcg cagtagaaga agcgttatca caaaccgtca
     1441 gcggtttagg tcgcttatta aattatacgc tttgtgaaat gaccaaaagt taatacgagg
     1501 cattcatgaa acgaattgcg tttgtgggta gtgtcggggc aggaaaaaca acgttattta
     1561 atgcgttgca ggggaattat accctcgcca gaaaaacaca ggccgtggaa tttaatgata
     1621 agggcgatat tgatacgccg ggtgaatatt ttagccatcc ccgctggtat cacgccttaa
     1681 ttaccacgct acaggatgta gacatgctga tctatgtcca tggcgcaaat gacccggaaa
     1741 gtcggttgcc tgccgggttg ctggatattg gcgtcagcaa acggcaaatc gccgtcatca
     1801 gtaaaacgga catgccagat gctgacgtcg ccgcaacgcg aaagttattg cttgagacgg
     1861 gtttcgaaga gccgattttc gagctaaaca gccacgaccc gcaaagcgtg cagcaactgg
     1921 tggattatct ggcatctctc accaaacagg aggaagcagg tgaaaaaact catcacagcg
     1981 aatgatattc gtgaagcaca cgcgcgcggc gaacaggcaa tgtccgtggt tctgcgcgcc
     2041 agcattatta ccccggaagc ccgtgaagtg gcggatctac tgggttttac catcaccgaa
     2101 tgtgatgaat cgatcccggt aacggcgtcc gtgcccgcca gcgtgccagc cgacaaaacc
     2161 gaaagccagc gcatccgcga aaccatcatt gcccagctgc cggaaggcca gtttaccgaa
     2221 agcctggtcg cacagctgat ggaaaaagtg atgaaggaaa aacagtcgct ggagcagggc
     2281 gcaatgcagc cgagcttcaa atcggtgacc ggcaaaggcg gcatcaaagt gattgatggc
     2341 agcagcgtca agtttggtcg tttcgacggc gcagagccgc attgcgtggg cttgactgat
     2401 cttgtgaccg gagacgacgg cagcagcatg gccgccggtt ttatgcagtg ggagaacgca
     2461 ttcttcccgt ggaccctgaa ctacgacgaa atcgacatgg tgctggaagg ggtgctgcat
     2521 gttcgccacg aaggccaaac catgatcgcc aaagcaggcg acgtgatgtt tatcccgaaa
     2581 ggctccagca tcgaatttgg tatgacatcc agcgtgaaat tcctgtatgt cgcctggccg
     2641 gctaactggc aatccctatg aaagatttca tcaccgaagc atggctaaga gcgaaccata
     2701 cgctcagcga aggcgcagag atccatctcc ctgcggacag tcgcctgacg ccctctgccc
     2761 gggagttgct ggaaagccgc catctgcgca tcaagtttat tgacgagcag ggccgcctgt
     2821 ttgttgacga tgaacagcag aagccgcagc ccgttcatgg gctgaccagt agcgatgaac
     2881 atccgcaggc gtgctgcgaa ctgtgccgcc agccggtggc aaaaaagccg gatacgctga
     2941 ctcacctgtc ggcggaaaaa atggtcgcca aaagcgatcc gcgtctgggt tttcgcgcgg
     3001 ttctcgacag caccattgcg ctggcagtgt ggctgcaaat tgaactggcg gaaccgtggc
     3061 agccgtggct ggcggatatc cgttcgcgtc ttggcaacat tatgcgcgcc gatgcgctgg
     3121 gggaaccgct gggctgccag gcgattgtcg ggctttctga cgaagatctg catcggcttt
     3181 ctcatcagcc gctgcgctat ctcgaccacg atcatctggt gctggaagcc agccacgggc
     3241 gcgatgctgc gttgctcaat ctgctacgca ccaaagtgcg ggaaaccgaa accgtagcgg
     3301 cgcaggtctt tatcacccgc agctttgaag tattacgccc ggacattttg caggcgctga
     3361 accgcctttc cagcacggtc tacgtgatga tgatcctgag cgtaacgaag cagccgctaa
     3421 cggtgaagca gatccaacaa cgactggggg aacgcaatga ttattgaacg ttgtcgtgaa
     3481 ctggcgttgc gagcgcccgc cagagtggtt tttccggatg cgttagatca acgtgtgctg
     3541 aaagccgcgc aatatttaca tcaacaaggt ctggcaacgc ccattctggt cgccaatccg
     3601 tttgaacttc gtcagtttgc gctcagtcac ggcgtggcga tggacgggct acaggtgatt
     3661 gatccgcatg gcaacctcgc aatgcgggaa gaatttgctc atcgctggct ggcccgcgcg
     3721 ggcgaaaaaa cgccgccgga tgcgctggaa aaacttaccg accctctgat gttcgccgca
     3781 gcaatggtca gcgccggtaa agcggatgtc tgtatcgcag gcaacctctc ttccacggca
     3841 aatgtgctgc gtgccggatt acgcattatc ggcttgcagc caggctgtaa aacgctctct
     3901 ttcattttcc tgatgttgcc acagtacagc ggcccggcgt tgggctttgc cgattgcagc
     3961 gtggtgccac agccgacggc ggcgcagctg gcggatatcg cgcttgccag tgccgaaacc
     4021 tggcgcgcca tcaccggaga agagccgcgc gtggcgatgc tgtcgttttc cagcaatggt
     4081 agcgcccgtc acccctgtgt tgctaacgtc cagcaggcga cagaaatcgt ccgtgagcgc
     4141 gcaccaaagc tggtggtgga tggcgagtta cagtttgacg ccgccttcgt gccggaagtg
     4201 gcggcgcaaa aagcgcctgc cagcccgcta cagggcaagg ccaatgtgat ggtttttccg
     4261 tcgctggaag ccggaaatat tggttacaac atcgcacaac gactcggcgg atatcgtgcc
     4321 gtcgggccac tgatacaagg acttgccgtg ccgatgcacg atctctctcg tggttgtagc
     4381 gtgcaggaaa ttatcgagct ggcgctggtg gcagctgtgc cgcgtcagac agaagtgaac
     4441 cgcgaaagca gtttacaaac actggttgaa tgaacggtcc cgttctggac cctgataaag
     4501 aggaaagcac aatggaagca ttaggaatga tcgaaacccg gggcctggtt gcactgattg
     4561 aggcttctga cgcgatggtg aaagctgcgc gcgtcaagct ggttggtgtt aagcagattg
     4621 gcggcggcct gtgtactgcc atggttcgtg gtgatgttgc agcctgtaaa gccgcgaccg
     4681 atgcaggtgc cgcagcggca cagcgtatcg gcgagctggt atctgtacac gttatcccgc
     4741 gtccgcacgg cgacctggaa gaagtcttcc cgatcggcct gaaaggcgat agcagcaacc
     4801 tgtaatcacc ctgtgtgacg tcgattcggg cgttacgctc tctccttttt cattttacct
     4861 tctgcggagg gtagggggag cttttacctg aaatacgcca cggaggcggg tatgaaactg
     4921 gcagtcgtca ctggacaaat tgtttgtacc gtacgccatc acggactggc gcatgacaaa
     4981 ttgctgatgg tggaaatgat tgatccacaa ggtaatcctg acgggcaatg cgccgtcgcc
     5041 atcgacaata ttggcgcggg aaccggggag tgggtgttac tggtgagtgg cagttccgcc
     5101 cgccaggcgc ataaaagcga aacgtcaccg gtcgatctgt gcgtgattgg cattgtcgat
     5161 gaggtggtgt ctggcggtca ggtaattttc cacaaataag gcagaacatc atgaatcaac
     5221 aggatattga acaggtggtg aaagcggtac tgctgaaaat gcaaagcagt gacacgccgc
     5281 ccgccgccgt tcatgagatg ggcgttttcg cgtccctgga tgacgccgtt gcggcagcca
     5341 aagtcgccca gcaagggtta aaaagcgtgg caatgcgcca gttagccatt gctgccattc
     5401 gtgaggcagg cgaaaaacac gccagagatt tagcggaact tgccgtcagt gaaaccggca
     5461 tgggccgcgt tgaagataaa tttgccaaaa acgtcgctca ggcgcgcggc acgccaggcg
     5521 ttgagtgtct ctctccgcag gtgctgaccg gcgacaacgg cctgacttta attgaaaacg
     5581 cgccctgggg cgtggtggct tcggtaactc cgtccactaa cccggcggca accgtaatta
     5641 ataacgccat cagcctgatt gccgcgggca acagcgtcat ttttgccccg catccggcgg
     5701 cgaaaaaagt ctcccagcgg gcgatcacgc tgctcaacca ggcgattgtt gccgcaggcg
     5761 ggccggaaaa cttactggtt actgtggcaa atccggatat cgaaaccgcg cagcgtttgt
     5821 tcaagtttcc gggcatcggc cttctggtgg tgaccggcgg cgaagcggta gtagaagcgg
     5881 cgcgtaaaca caccaataaa cgtctgattg ccgcaggcgc tggcaacccg ccggtagtgg
     5941 tggatgaaac cgccgacctc gcccgtgccg ctcagtccat cgtcaaaggc gcttctttcg
     6001 ataacaacat catttgtgcc gacgaaaagg tactgattgt tgttgatagc gtagccgatg
     6061 aactgatgcg tctgatggaa ggccagcacg cggtgaaact gaccgcagaa caggcgcagc
     6121 agctgcaacc ggtgttgctg aaaaatatcg acgagcgcgg aaaaggcacc gtcagccgtg
     6181 actgggttgg tcgcgatgcg gcgaaaatcg cggcggcaat cggcctgaac gtgccgcaag
     6241 aaacgcgttt gctgtttgtg gaaaccactg cagaacatcc gtttgccgtg accgaactga
     6301 tgatgccggt gctgcccgtc gtgcgcgtcg ccaacgtggc ggatgccatt gcgctggcgg
     6361 tgaaactgga aggcggttgc caccacacgg cggcaatgca ctcgcgcaac atcgaaaaca
     6421 tgaaccagat ggcgaatgct attgatacca gcattttcgt taagaacgga ccgtgcattg
     6481 ccgggctggg gctgggcggg gaaggctgga ccaccatgac catcaccacg ccaaccggtg
     6541 aaggggtaac cagcgcgcgt acgtttgtcc gtctgcgtcg ctgtgtatta gtcgatgcgt
     6601 ttcgcattgt ttaaggagta acagatggcg cacgacgaac aatggctcac cccacgtctg
     6661 caaacggcgg caacgctgtg taaccagacg cccgccgcga cggaatctcc gctgtggctg
     6721 ggggtggatc tgggcacctg cgatgtggtg tcgatggttg tcgaccgcga cggtcagccg
     6781 gtggcggtat gcctcgactg ggccgatgtg gtccgcgacg gcatcgtctg ggatttcttc
     6841 ggcgctgtca ccattgttcg tcgccatctc gacacgctcg agcagcaatt cggtcgccgt
     6901 tttagccatg cggcgacttc atttcctcca ggtacggacc cgcgtatttc catcaacgtg
     6961 ctggagtctg ctggactgga agtgagccat gtgctggatg agccaaccgc agttgcggag
     7021 ctgctgcaac tggacaacgc cggtgtagtg gatatcggcg gcggcactac cggcattgcc
     7081 atcgtgaaaa agggcaaggt gacgtactcg gcggatgaag caaccggcgg acatcacatc
     7141 tctctgactc tcgccggaaa tcgccgtatt tcgctggaag aggcggagca gtacaagcgc
     7201 ggtcacggtg aagagatttg gcctacggtg aaaccggtgt acgaaaaaat ggcggacatt
     7261 gtcgcccggc atattgaagg gcagggcatt actgatttat ggctggcggg cggctcttgt
     7321 atgcaaccgg gcgtggcgga actgtttcgc aaacaattcc cggcgttaca ggtgcattta
     7381 ccgcagcaca gtttgtttat gaccccgctg gcgatcgcca gtagtgggcg agagaaagcg
     7441 gaggggctat atgcaaaatg aattgcagac cgcgctcttt caggcgttcg ataccctgaa
     7501 tctgcaacgg gtaaaaacat ttagcgttcc accggtgacg ctttgcggtc cgggctcggt
     7561 gagcagttgc ggacagcaag cgcaaacgcg tgggctgaaa catctgttcg tgatggcaga
     7621 cagctttttg catcaggcag ggatgaccgc cgggctgacg cgcagcctgg ctgttaaagg
     7681 catcgccatg acgctctggc catgtccggt gggcgaaccg tgcatcaccg acgtgtgtgc
     7741 agccgtggcg cagttgcgtg agtcaggctg tgatggggtg atcgcatttg gcggcggctc
     7801 ggtgctggat gcggcgaaag ccgtggcgtt gctggtgacg aacccggata gcacgctggc
     7861 agagatgtca gaaaccagcg ttctgcaacc gcgcttgccg ctgattgcct atgaagatga
     7921 ctgcgtgacg cggctgattc aggacgatgt taacgaaacg gcctacaacc agattaaaaa
     7981 ctggagcatc agcgaactgc gtgagtatgt gctgagcgat gaaactagcg tggacgacat
     8041 tgcctttacc cgcaaagggc tgacctcgga agtggtcgcg gcggtagcga agatttgctc
     8101 caacgcggac ctgatctatg gcgcgaagaa aatgccggta atcaaaaagg ccaataccac
     8161 catcggtatt ccgggcacct tcagcgcccg tttgcagcca aatgacactc gtgacgacgt
     8221 gcaaagtatc gccgcgcaaa tctacgaagg gctttccttc ggggtgggcg atgcggtgat
     8281 cggcgtcaac ccggtaactg acgacgtgga aaacttaagc cgcgtgctgg ataccattta
     8341 tggcgtgatc gacaaattca acatcccaac tcagggctgc gtactggcgc acgtcaccac
     8401 ccagatcgaa gcgattcgtc gcggcgcgcc tggcggactg attttccaga gtatctgtgg
     8461 cagcgaaaaa gggctgaaag agtttggcgt ggaactggcg atgctcgacg aagcgcgcgc
     8521 agtgggtgca gagttcaacc gtatcgccgg ggaaaactgc ctctacttcg aaaccggaca
     8581 aggctctgcg ctatccgctg gcgctaactt cggcgctgac caggtgacga tggaagcacg
     8641 taactatggg ctggcgcgtc attacgatcc gtttatcgtc aacaccgtgg ttggctttat
     8701 tgggccggag tatctctaca acgaccgcca gattatccgt gctggcttag aagatcactt
     8761 tatgggcaag ctgagcggca tctctatggg ctgtgactgc tgctacacca accacgctga
     8821 cgctgaccag aacctcaacg aaaacctgat gatcctgctc gccaccgcag gctgcaacta
     8881 catcatgggg atgccgctgg gtgatgacat catgctcaac taccagacca ccgcattcca
     8941 cgataccgcc actgtgcgtc agttactcaa cctgcgcccg tcaccagagt ttgaacgctg
     9001 gctggaaagc atgggcatta tggcaaacgg tcgcctgacc aaacgggcgg gcgatccgtc
     9061 actgttcttc tgatgacgcg gagataacac atcatggatc aaaaacagat tgaagaaatt
     9121 gtacgcagcg tgatggcgtc aatggga
//
LOCUS       DADMIB010000170         9089 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.172, whole genome shotgun sequence.
ACCESSION   DADMIB010000170 DADMIB010000000
VERSION     DADMIB010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9089
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.172"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            52..936
                     /locus_tag="JNZ89_003660"
     CDS             52..936
                     /locus_tag="JNZ89_003660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707334.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HAY8937395.1"
                     /translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG
                     AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP
                     WTLKSHHEDADGVALTFELTQSEETKKFCPHDFTLLAHFRVGKTCEIDLESHGEFETT
                     SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCS
                     VINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQK
                     VTKEKPAHLAQSIRVAKR"
     gene            complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="JNZ89_003661"
     CDS             complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="JNZ89_003661"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal reductase YeaE"
                     /protein_id="HAY8937396.1"
                     /translation="MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIEL
                     GLTLIDTAEMYADGGAEKVVGEALTGLRDNVFLVSKVYPWNAGRQKAINACEASLRRL
                     NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQ
                     CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHA
                     HNISSAQVLLARVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELTMLDKAYPAPK
                     GKTALDMV"
     gene            complement(1931..2677)
                     /locus_tag="JNZ89_003662"
     CDS             complement(1931..2677)
                     /locus_tag="JNZ89_003662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltA-interacting protein"
                     /protein_id="HAY8937397.1"
                     /translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT
                     DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL
                     DDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI
                     GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR
                     YTRLSDEVTDSPMVDKSWTGLISTGITYKF"
     gene            3113..5047
                     /gene="yeaG"
                     /locus_tag="JNZ89_003663"
     CDS             3113..5047
                     /gene="yeaG"
                     /locus_tag="JNZ89_003663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YeaG"
                     /protein_id="HAY8937398.1"
                     /translation="MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLM
                     AIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEK
                     KQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQI
                     LEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDEN
                     NQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLL
                     TATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLR
                     ISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGES
                     LKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVL
                     EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVT
                     YADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARAN
                     NSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKG
                     YTRKQVRLLCEWYLRVRKSS"
     gene            5160..6443
                     /locus_tag="JNZ89_003664"
     CDS             5160..6443
                     /locus_tag="JNZ89_003664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaH/YhbH family protein"
                     /protein_id="HAY8937399.1"
                     /translation="MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAMNKRSVT
                     DVDSGESISIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQ
                     GQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGV
                     PANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAE
                     LRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILL
                     YLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNP
                     AQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHL
                     QSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKD"
     gene            6590..8065
                     /locus_tag="JNZ89_003665"
     CDS             6590..8065
                     /locus_tag="JNZ89_003665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HAY8937400.1"
                     /translation="MIQSTRISMGLFFKYFLSLTKIDPSQNYISLPSIKSSTHIALLF
                     MVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNA
                     VIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVS
                     IFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYN
                     ADYSLYVVDYCPDNHTATRGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLA
                     SLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLT
                     NIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQ
                     QSIRPDDILARLEGEVFGLLFTELNSAQAKIIADRIRKNVELLTGFSNRYDVPEQMTI
                     SIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI"
     gene            8159..8245
                     /locus_tag="JNZ89_003666"
                     /pseudo
     CDS             8159..8245
                     /locus_tag="JNZ89_003666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001459804.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            8246..>9089
                     /locus_tag="JNZ89_003667"
     CDS             8246..>9089
                     /locus_tag="JNZ89_003667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY8937401.1"
                     /translation="MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQ
                     KADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHK
                     YPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDL
                     NDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQN
                     VMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGREVAK
                     FSVPL"
BASE COUNT         2393 a         2181 c         2107 g         2408 t
ORIGIN      
        1 cttcggtcgc tctttttttt acctgataaa atgaagttaa aggactgcgt catgattaag
       61 aaaatttttg cccttccggt catcgaacaa atctcccctg tcctctcccg tcgtaaactg
      121 gatgaactgg acctcattgt ggtcgatcat ccccaggtaa aagcctcttt tgcattacag
      181 ggcgcacacc ttctctcgtg gaaacctgcg ggtgaagaag aagttctgtg gttgagcaac
      241 aacacaccgt tcaaaaatgg cgtcgctatt cgcggtggcg taccggtttg ctggccgtgg
      301 tttggtccgg cggcacaaca aggtctgcct gcgcacggtt ttgcccgcaa cctgccgtgg
      361 acgctgaaat cacatcatga agatgctgat ggcgtagcgc tgacttttga attgacgcaa
      421 agcgaagaga cgaaaaaatt ctgtccgcac gactttacgc tgttagcgca tttccgcgtg
      481 ggtaaaacct gtgaaatcga tcttgaatca catggcgaat ttgaaaccac ctctgccctg
      541 catacctact ttaacgtggg tgatatcgct aaggtaagcg tcagtgggct gggcgatcgc
      601 ttcattgata aagtgaatga cgcgaaagaa gatgtactga ccgacggtat tcagaccttc
      661 cctgaccgta ccgatcgcgt gtatctgaat ccgcaagatt gcagcgtgat taatgatgaa
      721 gcgctgaatc gtattatcgc cgtaggccac cagcatcatc tgaacgttgt aggctggaac
      781 ccgggaccgg cgctttcaat tagcatgggc gatatgccgg atgatggcta caaaacattt
      841 gtttgtgtag aaacggctta cgcttcagaa acgcaaaaag tcaccaaaga gaaacctgca
      901 catctggcgc aatccattcg cgttgcgaaa cgttaatttg cgttaatgtt gtgtgccggg
      961 tgcgatgcat ccggcacgta tcaacatcac accatatcca gcgcagtttt tccttttggt
     1021 gccggatacg ctttatccag catggttaat tccgctgacg aaagttcgac ctcaagcaca
     1081 gccgcattct gttgaacatg ggcaatcgtg gccgcttttg gaatcgccat cacaccctga
     1141 tggctgatta ccctcgccaa caatacttgt gccgagctga tattgtgagc atgtgcaatt
     1201 tcgttgacta ccgcgttttt taacagtcca ttgcgcaacc gcccggcctg ggctaatgga
     1261 ctgtaagcca tcaccggcat ctgctgttgc tggcaccagg ggagtagatc gtactcaatc
     1321 cctcgtgaac cgagatggta aagcacctga ttagtggcac actgatttcc ccccggcagc
     1381 tgccagagtt cctgcatatc agcataatca aggttagaaa cgccccagcg gcggattttt
     1441 ccctgggcga tcaatttttc catcgctgca acagtctctt caaaagcgaa actgccagac
     1501 cagtgtaata agtagagatc gagataatca gtattgagac ggcgtaaact ggcttcgcat
     1561 gcatttatcg ctttttgcct gccagcattc cacggataga ctttagagac gagaaagacg
     1621 ttatcacgca gaccggttaa tgcttcccca accacctttt cggcaccgcc atcggcatac
     1681 atttcggcgg tatcaatgag ggttaaaccg agctcaatgc ccgcgcgtag tgcagcaact
     1741 tctgttttgc gctgactggc atcttcgccc atataccatg ttccctgccc tatggctggc
     1801 agtgagacat cgccactaaa ttgaatcatt ttttgttgca ttgtttcctc ccaggtattg
     1861 caccaccgta atgcaaaaca gggcgtgacg ccctgttttt atgcacaaaa tgccctggaa
     1921 agatgcatta tcagaatttg taggtgatcc cggtagaaat caggccagtc caggatttat
     1981 ccaccatcgg gctgtcagta acttcatcag acagacgggt atagcgcgcg gtaccgtaaa
     2041 cactccagtc gccgaggaag ttgtagctgg cgctcagctc caggtaaggg ctccagctgt
     2101 cgttcgggtt atagccacgc agaccgctgc gagcggactc tttgcgcgat acgccataat
     2161 agtattcgtt ctggttttcg ctgttccact gcacaccaat acccggagtc acggtcaggc
     2221 caccgttggt gtaacgatac aaccaggcca tatcccagac aatgccgttg ctgttatcca
     2281 gggtatcgcc agccagggtg gtacgcaggt aaccgtactg ggtaaagtga gcataagaca
     2341 gaccagccat catggtgctc ttacggtcat ccaggtgacg catttggtga tcgccactgt
     2401 ctttcgcttt gaagtaaagc ggcgaccagt aagcggtaat tgaaagttta tccgttgcgt
     2461 cattccacag gtagtaacca ccacctaagc cacggaacca gaagttatcg ccttcatagt
     2521 tgattaccgg tactgggtaa acatcggtat cgtaatcttt atatgggtgc tcaacgacac
     2581 ctacgcctgc gcccaaggaa aatttacctt cagcgtgcgc tacgcctgca gacgttgcga
     2641 taagcactcc aagtgccaga agtttgagtt tggtcacaat taatcattcc ttaaacaaat
     2701 gtttagcggg cgacaaagtt tacccgtcaa tacatcgaaa cccaaccttt ttacgttttc
     2761 attttttaaa gtaactgttt aattttcctg ccgcggatga caccgcgctt acagccaaat
     2821 gaatttagcg ttactggcga gcctggtctt tacattaatt atgcaaaatt tatggatgag
     2881 ttgttgatat gccattgaaa ttaagaaagc cgtgcaggca agttttccat ttgccatcta
     2941 cgcttaattt tgaaggtgta tcaccgggca cgttgttctc atcgtcgata aaatggcatg
     3001 agagttgctg tgttttagca agagacgtcg ttcagtttac ctcttccggg aggctctact
     3061 attcatatga acggctctta acctgtgcta aaaaacgaaa ggacggcata ccatgaatat
     3121 attcgatcac tatcgccagc gatatgaagc tgccaaggac gaagagttca cactgcagga
     3181 gtttcttacc acttgtcggc aagatcgcag tgcttatgcc aacgcggctg agcggctatt
     3241 gatggctatc ggtgagcctg tcatggtcga tacagcccag gaacccagac tttctcgact
     3301 cttttctaac cgggtcattg cacgttatcc ggcgtttgaa gagttttacg gcatggaaga
     3361 cgcgattgaa cagattgtct cttatctgaa acacgcggct caggggctgg aagagaagaa
     3421 acaaatcctg tatctgctgg ggcctgtggg tgggggtaaa tcatcgcttg ctgagcgact
     3481 gaaatcatta atgcagctcg taccgattta tgtattgagc gccaacggtg agcgtagccc
     3541 ggtcaacgat catccgttct gtcttttcaa tccgcaggaa gatgcgcaga ttctggaaaa
     3601 agagtatggc attcctcgcc gttatctcgg caccatcatg tcgccgtggg cggcaaaacg
     3661 cctgcatgaa tttggtggcg atatcactaa gttccgggta gtgaaggtct ggccgtcaat
     3721 tctgcaacaa attgctatcg ccaaaacgga acccggcgat gagaacaacc aggacatctc
     3781 cgcgctggtt gggaaagtcg atattcgtaa actcgaacac tacgcgcaga atgacccgga
     3841 cgcctacggc tattccggtg cgctgtgccg cgccaatcag gggatcatgg aattcgttga
     3901 gatgtttaaa gcaccgataa aagtgctgca tcccttgtta accgccactc aggaaggtaa
     3961 ctacaacggg acggaaggta tctccgccct gccgttcaac gggattattc tcgcccactc
     4021 gaacgagtcc gaatgggtca ctttccgtaa taacaaaaac aacgaagcct tcctcgaccg
     4081 tgtttacatc gtgaaggtgc cgtattgctt gcgcatttcc gaagagatca aaatctacga
     4141 gaaattgctt aatcacagtg aattgactca cgccccatgc gcccctggca cgctggaaac
     4201 actgtcacgt ttttccattc tttcgcgcct gaaagagcca gaaaactcca gcatttattc
     4261 aaagatgcgg gtttatgatg gcgaaagtct gaaagacacc gatcccaaag ccaagtcgta
     4321 tcaggaatat cgtgactacg ccggtgtcga tgaagggatg aacggtctgt cgacgcgttt
     4381 tgcgtttaag atcctctccc gcgtgttcaa cttcgatcat gtagaagtgg cggcaaaccc
     4441 ggtccatctg ttctacgtcc tggaacagca gatcgagcgc gagcagttcc cgcaagagca
     4501 ggcagaacgc tatctggagt tcctgaaagg ttatctgatc ccgaaatatg ccgagtttat
     4561 cggcaaagag atccagacgg cctaccttga atcctattcc gaatatgggc aaaacatttt
     4621 cgaccgttat gttacctacg cggatttctg gattcaggat caggagtatc gcgatccgga
     4681 taccgggcag ctgtttgacc gcgagtctct taacgccgag ctggagaaaa tcgagaaacc
     4741 ggcggggatc agtaatccaa aagatttccg caacgagatt gttaacttcg tactgcgcgc
     4801 cagagcgaat aacagcggac gcaatccgaa ctggaccagc tatgaaaaac tgcgcacggt
     4861 tatcgagaag aaaatgttct ccaataccga ggagctgttg ccggttatct cgtttaacgc
     4921 caaaacgtca accgacgagc agaagaaaca cgacgacttt gtcgaccgta tgatggaaaa
     4981 aggctacacc cgtaaacagg tgcgtttact gtgcgaatgg tatttgcgcg tacgtaaatc
     5041 gtcttaacaa ccctggcccg gtacacatgc taccgggcct acaacgacag cgaaccgtgg
     5101 gccagagaaa tggcaacaca ggcgtagcat acagttggca aatgtagtac ggggggcata
     5161 tgacctggtt tattgaccgg cgtctgaacg gcaaaaacaa aagcatggtg aatcgccagc
     5221 gttttttacg ccgttataaa gcgcaaatta aacagtcgat ctccgaggcc atgaataagc
     5281 gttcggtgac tgacgtcgac agcggcgaat ccatatccat tcccacggaa gatattagcg
     5341 aaccgatgtt tcatcagggg cgtggcggcc tgcgccaccg cgtacatccg ggcaatgacc
     5401 atttcgtcca gaacgaccga attgaacgtc cccagggtgg cggcggaggt tccggcagtg
     5461 gtcagggcca ggccagccag gatggtgaag gtcaggatga atttgtcttt cagatttcga
     5521 aagatgagta tcttgatctg ctctttgaag atttggcctt accgaatctg aaacaaaacc
     5581 aacaacgcca gctgaccgaa tataaaacgc atcgggcggg ttataccgct aacggcgttc
     5641 cagccaatat cagcgttgtg cgttccttgc agaactcact ggcgcgacgc acagccatga
     5701 cggcgggcaa gcgacgggaa cttcatgcgc tggaagagaa tttggccatc atcagcaaca
     5761 gtgaacctgc gcaactgctg gaagaggaac gtctgcgcaa agaaattgca gaattacgtg
     5821 ccaaaattga acgcgtccct tttattgaca ccttcgattt acgttacaag aactacgaga
     5881 agcggcccga tccctccagc caagcagtga tgttttgcct gatggacgtt tccggttcaa
     5941 tggatcaatc cactaaagat atggctaagc gtttttatat tctgctgtat ctgttcctca
     6001 gcagaacgta taagaacgtg gaagtcgtat acatccgcca tcatacccaa gcgaaagaag
     6061 tcgatgaaca tgagtttttc tactcgcagg aaacaggcgg caccattgtt tccagcgccc
     6121 tgaaactgat ggatgaggta gtgaaagagc gttataaccc ggcacagtgg aatatttacg
     6181 ctgcacaagc atcggacggc gataactggg ccgatgactc tccgctttgc catgaaatcc
     6241 tggcgaaaaa attattacct gttgttcgtt attacagcta tatcgaaatt acccgtcgtg
     6301 cacatcagac attgtggcga gaatatgagc atctgcaatc tactttcgac aactttgcga
     6361 tgcagcacat ccgcgaccag gatgatattt atccggtgtt ccgtgaactg tttcataaac
     6421 aaaatgcaac agctaaagac taaaactatc agccaggtca ttatcgcctg gctgattttt
     6481 agcttactgt aaattatctc atttattaca tacattagct tacaatcgct ttaaatatga
     6541 cagcataacc tttacataat ttagttccag aaaacaatca ttcggaaaaa tgattcagtc
     6601 aacacgtatt tccatggggt tattctttaa atatttttta tcgttaacga aaattgatcc
     6661 tagtcaaaac tatatatctc tgccatcaat aaaatccagc actcacattg ctctcctttt
     6721 tatggtttct atgggtacac aaaaattaaa agctcaaagc ttttttattt tcagtttatt
     6781 gctgacatta attttatttt gcattactac cttatataac gaaaacacaa atgtaaaact
     6841 catcccacag atgaattacc tgatggttgt tgtggctttg tttttcctta acgccgtcat
     6901 ttttcttttc atgttaatga aatatttcac taacaaacaa attttaccaa cactcatttt
     6961 aagccttgca ttcttaagtg gccttatcta tttagttgaa accattgtaa ttatccataa
     7021 accaattaac ggcagtacac tgatccagac aaagtcgaat gatgtttcta ttttctatat
     7081 tttccgccaa ctcagtttta tttgtttaac ctcgctggca ctcttttgtt atggaaaaga
     7141 caacatcctt gacaacaata agaaaaaaac gggaatcctg ttgctggcgt tgattccttt
     7201 tttagttttt ccccttctgg cacacaatct gagcagttat aacgctgact attctttgta
     7261 tgtcgtcgac tactgtccgg acaaccatac tgcgaccagg ggaatcaact atacaaaaat
     7321 attggtttgt ctgtgggcat ttttactgtt ctttattatc atgcgtacac gattagccag
     7381 cgaactatgg ccgttaatag cattattatg tctggcatcg ctatgctgca acttacttct
     7441 actgactctg gatgagtata attacaccat ctggtatatc agtcgcggga ttgaagtttc
     7501 cagtaaactg tttgttgtgt cttttctgat ttataacatt tttcaggagc tgcaactctc
     7561 cagcaaactg gcagttcatg atgtgctgac caatatttat aatcggcgct actttttcaa
     7621 cagcgtagag tcattattgt cgcgacctgt tgttaaggac ttctgtgtca tgctggttga
     7681 tattaatcag ttcaaacgca tcaatgccca atggggacat cgtgtgggtg ataaagtgct
     7741 ggtttcaatt gtcgatatta tccagcaaag catccgccct gatgatattt tagcgcgact
     7801 ggagggtgag gtgtttggct tgctatttac cgaactcaat agtgcccagg caaaaatcat
     7861 tgcggatcgt atacgtaaaa atgtcgaact cctgaccggc tttagtaaca gatatgatgt
     7921 tcctgaacaa atgaccatca gtattggcac ggttttttca acgggtgaca cgcgtaatat
     7981 ctcgcttgtc atgacggaag cagataaagc cttacgcgaa gcgaaaagcg aggggggcaa
     8041 caaagtgatt attcatcata tttaagtgca aaaatattca gagccatgct ttttgcgtgg
     8101 cttttgcata caatttatta ctattacccc taaatttccc ctccccagcg gcgcagagat
     8161 gagtataatt agcgcccctg tgccaggccg caatcgaact ttatctggtt ttctcgtttc
     8221 actaactgaa ggagtgccat ttatcatgaa attgcaccat agaatgctcc ggcattttat
     8281 cgccgcaagt gtcattgtgc tgacatcttc cttccttatt tttgaacttg tcgccagcga
     8341 cagagcaatg agtgcctatc tgcgctatat cgtgcagaaa gcagactcct cctttcttta
     8401 tgataagtat cagaatcaga gtattgccgc gcatgtgatg cgcgctctcg ctgctgagca
     8461 gtcggaagtg tcgccagaac agcggcgcgc catctgcgag gcttttgagt ctgccaataa
     8521 tacccatggc ttaaacctga ctgctcataa atacccgggc ttacgcggca cactacaaac
     8581 cgcatccact gactgcgaca caattgtgga agctgcagca ctattacccg cttttgatca
     8641 ggcagtggaa ggcaaccgcc accaggatga ttacggttca ggtcttggga tggccgaaga
     8701 gaaatttcac tattatctcg atctcaatga ccgctatgtc tatttttatg agccggttaa
     8761 tgttgaatac tttgcgatga ataactggtc cttcctgcag tcaggaagta ttggtatcga
     8821 tcgcaaagat attgaaaagg tatttaccgg gcgtaccgta ttgtcgagca tttaccagga
     8881 tcagcgtact aaacagaacg tgatgagttt gctgacgccg gtgtatgttg cagggcagct
     8941 aaaagggatt gtgctgctgg atattaacaa aaacaatttg cggaatatct tttacactca
     9001 tgaccgccct ctcctctggc gttttctcaa tgtcacgcta accgataccg attcggggcg
     9061 tgaagtggcc aaattcagtg tgccacttc
//
LOCUS       DADMIB010000171         9047 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.173, whole genome shotgun sequence.
ACCESSION   DADMIB010000171 DADMIB010000000
VERSION     DADMIB010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9047
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.173"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            195..1028
                     /gene="ppsR"
                     /locus_tag="JNZ89_003668"
     CDS             195..1028
                     /gene="ppsR"
                     /locus_tag="JNZ89_003668"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="posphoenolpyruvate synthetase regulatory
                     kinase/phosphorylase PpsR"
                     /protein_id="HAY8937402.1"
                     /translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE
                     NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
                     EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
                     CGKTPTSLYLAMQFGIRTANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR
                     EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM
                     Y"
     gene            1184..2230
                     /gene="aroH"
                     /locus_tag="JNZ89_003669"
     CDS             1184..2230
                     /gene="aroH"
                     /locus_tag="JNZ89_003669"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroH"
                     /protein_id="HAY8937403.1"
                     /translation="MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEK
                     ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG
                     WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
                     IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARTSHMFLSPDKNGQMT
                     IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
                     QLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGGQPLTYGQSITDPCLGWEDTE
                     RLVEKLASAVDTRF"
     gene            2362..2553
                     /gene="hemP"
                     /locus_tag="JNZ89_003670"
     CDS             2362..2553
                     /gene="hemP"
                     /locus_tag="JNZ89_003670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HAY8937404.1"
                     /translation="MRYTDSRKLTPETDANHKTASPQPIRRITSQTLLGPDGKLIIDH
                     DGQEYLLRKTQAGKLLLTK"
     gene            complement(2557..3993)
                     /locus_tag="JNZ89_003671"
     CDS             complement(2557..3993)
                     /locus_tag="JNZ89_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HAY8937405.1"
                     /translation="MTLSFVTRWRDELPETYTALSPTPLNNARLIWHNIELANTLSIP
                     SSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTM
                     DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
                     TAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLW
                     FSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD
                     HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLG
                     FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDW
                     FARYRGRLQQDEVSDSERQQLIQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEAL
                     RNPFSDRDDDYVSRPPDWGKRLEVSCSS"
     gene            complement(4056..4769)
                     /gene="ydiV"
                     /locus_tag="JNZ89_003672"
                     /pseudo
     CDS             complement(4056..4769)
                     /gene="ydiV"
                     /locus_tag="JNZ89_003672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416222.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anti-FlhDC factor"
     gene            complement(5015..5479)
                     /locus_tag="JNZ89_003673"
     CDS             complement(5015..5479)
                     /locus_tag="JNZ89_003673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
                     /protein_id="HAY8937406.1"
                     /translation="MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS
                     WHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDKLLPGDL
                     VFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI"
     gene            complement(5557..6306)
                     /gene="btuD"
                     /locus_tag="JNZ89_003674"
     CDS             complement(5557..6306)
                     /gene="btuD"
                     /locus_tag="JNZ89_003674"
                     /EC_number="7.6.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter ATP-binding protein
                     BtuD"
                     /protein_id="HAY8937407.1"
                     /translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA
                     RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKT
                     RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEP
                     MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE
                     EVLTPPNLAQAYGMNFRRLDIEGHRMLILTI"
     gene            complement(6306..6857)
                     /gene="btuE"
                     /locus_tag="JNZ89_003675"
     CDS             complement(6306..6857)
                     /gene="btuE"
                     /locus_tag="JNZ89_003675"
                     /EC_number="1.11.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional thioredoxin/glutathione peroxidase"
                     /protein_id="HAY8937408.1"
                     /translation="MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYE
                     QLENIQKAWADRGFVVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGE
                     GRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQ
                     RFSPDMTPEDPIVMESIKLALAK"
     gene            complement(6920..7900)
                     /gene="btuC"
                     /locus_tag="JNZ89_003676"
     CDS             complement(6920..7900)
                     /gene="btuC"
                     /locus_tag="JNZ89_003676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter permease BtuC"
                     /protein_id="HAY8937409.1"
                     /translation="MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISLGDWF
                     TPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLI
                     AAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM
                     TWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGE
                     ISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLL
                     PGCALAGASALLLADIVARLALAAAELLIGVVTATLGAPVFIWLLLKARR"
     gene            complement(8109..8438)
                     /locus_tag="JNZ89_003677"
     CDS             complement(8109..8438)
                     /locus_tag="JNZ89_003677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000997174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937410.1"
                     /translation="MNDDLERRVSCLESDVTEIKNNLITLTTRSESFATKSDVLEIRE
                     GLRLEMAESRQSLKSEMADLRQSLKVEMAEHRTELQKSFANQTWLLTGIVLSAMAVLV
                     AVVTVIK"
     gene            complement(8546..8908)
                     /locus_tag="JNZ89_003678"
     CDS             complement(8546..8908)
                     /locus_tag="JNZ89_003678"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937411.1"
                     /translation="MKFHLDELKRMATLDNFARFLNESSTNEKCLSCGDTDMYMYLTN
                     IVEVGPEPKTAEECDLGTFVMLDYIGPFTGYPGYEGHDRENIHNYEFRLTCNRCGFVH
                     RYSARAFMNWVGKQGDEK"
BASE COUNT         2394 a         2396 c         2049 g         2208 t
ORIGIN      
        1 gttgcgcaaa cctgctctat tcgacaattt ccacataaac catcggtata aacgaaacca
       61 taaaaatgaa atgctgtttt cataaaaaat aaaattgaag gttcatttta taaaccagac
      121 attacctcct acgcttctgt gcgtttttaa tttatgcttt catagaatta tgtctgcatc
      181 acgggaagaa caaaatggat aatgctgttg atcgccacgt tttttatatt tctgatggta
      241 cggcaataac tgcggaggta ttaggacacg cagtaatgtc acaatttccc gtcactatca
      301 gcagcattac gctgccgttt gtcgaaaatg agagccgtgc acgggcagtg aaggatcaga
      361 ttgacgcaat ttatcaccag acaggtgtgc gcccgctggt cttctactcc atcgtgttgc
      421 cggagattcg cgccatcatc ttgcaaagtg aaggcttttg ccaggatatc gttcaggcgc
      481 tggttgcccc gctacaacaa gagatgaaac tggatccaac gccgattgct catcgtaccc
      541 atggccttaa ccctaataat ctcaataaat atgatgcgcg cattgcggcg attgattaca
      601 cccttgccca cgatgacggc atttcgttgc gcaatctgga tcaggctcag gtgatcctgc
      661 tcggtgtttc tcgctgtggt aaaaccccca ccagtctgta tctggcaatg caatttggta
      721 tccgcacggc aaactacccc tttattgccg acgatatgga taatctggtg ctacccgcgt
      781 cgctcaaacc gcttcagcat aaattgttcg gcctgactat cgacccggaa cgtctggcgg
      841 cgattcgcga ggaacgtcgg gagaacagtc gctatgcctc gcttcgtcag tgcagaatgg
      901 aagtcgcgga agtggaagcc ttgtaccgta aaaatcagat cccgtggatt aacagtacca
      961 attattcggt agaagagatt gccaccaaga tcctcgatat catgggcctt agtcgccgaa
     1021 tgtactagag aactagtgcg ctggtttgtt ttttgttatc atgctaacca cccggcgagg
     1081 tgtgacacac ctcgcacttg aaatcagctg cgattggttt atcgtgatgc gcatcacttc
     1141 ccggtagtcc tgccgtagaa gcaacaaatt tctgagactt gtaatgaaca gaactgacga
     1201 actccgtact gcgcgtattg agagcctggt aacgcccgcc gaactcgcgc tacggtatcc
     1261 cgtaacgcct ggcgtcgcca cccatgtcac cgactcccgc cgcagaattg aaaaaatact
     1321 gaatggtgaa gataagcgac tgttggtcat tattggcccc tgctcgatcc acgatctcac
     1381 cgctgcaatg gagtacgcca cccgtctgca gtcgctgcgc aaccagtacc agtcacggct
     1441 ggaaatcgta atgcgcacct attttgaaaa accacgaact gttgtcggct ggaaagggct
     1501 aatctccgat ccggatttaa acggcagcta tcgggtaaat cacggtctgg agctggcgcg
     1561 caaattactt ttacaggtaa atgagctggg tgtccctacc gcgactgagt ttctcgatat
     1621 ggtgaccggt cagtttattg ctgatttaat cagttggggc gcgattggcg ctcgtactac
     1681 cgaaagtcag atccaccgcg aaatggcttc agcactctcc tgtccggtag gttttaaaaa
     1741 tggtaccgat ggcaacacgc ggattgccgt ggatgctatc cgcgcagccc gcaccagcca
     1801 tatgttcctc tcgccagaca aaaatggtca gatgaccatc tatcagacca gcggcaaccc
     1861 gtatggccac attattatgc gtggcggcaa aaaaccgaat tatcatgccg atgatatcgc
     1921 cgcagcctgc gatacgctgc acgagtttga tttacctgaa catctggtgg tggatttcag
     1981 ccacggtaac tgccagaagc agcaccgtcg ccagttagaa gtttgtgagg atatttgtca
     2041 gcaaatccgc aatggctcta cggcgattgc tggaattatg gcggaaagtt tcctgcgcga
     2101 aggaacgcaa aaaatcgtcg gcggtcagcc gctcacttac ggtcaatcca ttaccgaccc
     2161 gtgtctgggc tgggaagata ccgaacgcct ggtcgaaaaa ctcgcctctg cggtagatac
     2221 ccgcttctga atgcgtgccc atgcctgatg ggatgggcat ttctgcgcaa cttgttgtct
     2281 tctcaacaca ttactgcttg ctctggcctg ccataatatt gataataaga atcattgtta
     2341 tatcaattat tattaatttt tatgcgttat acggatagca gaaaactcac gcctgaaacg
     2401 gatgccaatc acaagaccgc ttccccgcag cccatccggc gaattaccag ccagacactg
     2461 ttaggtccgg atggcaaact gattatcgat catgacgggc aagaatatct gctccgtaaa
     2521 actcaggctg gcaagctgct gttaactaag tagcctttaa ctcgagcagc tgacttccag
     2581 ccgtttaccc cagtcaggtg gacgactgac atagtcatca tctctgtcgc tgaaaggatt
     2641 tcgcaacgcc tcatgcaggc ggtgcaattc catcatatca cccttttctg ccgcttcaat
     2701 cgcccgttgc gccaaccagt tgcgcaatac cagagctggg ttaacgcttt gtatcagttg
     2761 ctgacgctca ctatcgctaa cctcgtcttg ttgcaaacgc ccccgataac gggcaaacca
     2821 gtcatcaaat gccgcacgat caataaactc atcacgtagc ggtgacgccg cgctgtgctg
     2881 ctcggtcaga ctcagcatgc ggaatgtgcg ggtataatcg ctgcgctctc gcgccatcag
     2941 actgaataat tcattcagta gcgcgttatc ctctttttgc tccgtcatga agcccagttt
     3001 ctgccgcatc cgttgtccat aatgcgtcaa caaaacctgc tgatagctgt ccagggcctc
     3061 attcagggca tctacggcaa caaatggtga caatgtctgc gccagacgct gtaaattcca
     3121 caacgcgaca gcaggttgat tatcaaagct ataacgccct tgatgatccg agtgattaca
     3181 aataaaaccg ggttcgtaat catcaagaaa accaaacggc ccgtaatcaa gcgtcagtcc
     3241 cagcagcgac atgttgtcgg tattcatcac cccatgtgca aagccgaccg tctgccattg
     3301 ggcaattaac gacgcggtac gtgcgacaac atcgctaaac cagagacggt atttgtcctc
     3361 atcatcttca agatgtgacc agtaatgacg aatagcaaag tcagctaact gacgaacctt
     3421 ttccgactcg cggcggtagt aaaaatgttc gaaatgacca aagcgcagat gacttggtgc
     3481 cacacgcatc agcatcgcgc ctggctccgc cgtttcccga tacactggcg aatcgctggt
     3541 gacgatactt aacgcgcggg tcgtcggaat gcccagataa tgcatcgcct cactggcgag
     3601 actttctcgt atcgtcgaac gtaaaaccgc ccgtccatca cccattcgcg aataaggcgt
     3661 caggccagca cctttcagat gccagtccat tgtagtgcca tcagcaagca gttgttcgcc
     3721 gagtaaaatg ccgcgcccat cacccagttg gcccgcccag acgccgaact gatgaccact
     3781 gtaaacctgc gccagtggtg acataccagg cagtagggct tcgccgcccc agacacctgc
     3841 gccattttta aacagcgacg atggaatact cagcgtgtta gccagttcga tattatgcca
     3901 aatcagccgg gcattattta aaggcgtagg ggaaagtgct gtataggttt ctggcaattc
     3961 atcgcgccag cgggtaacaa aagacagggt catagatcct cctgtttgat agtgtagacg
     4021 gttactctcg tcttaaacac cagcaaacag aagggttatc gctgaaccaa cgtcgttatc
     4081 tgatttatgg gaacggcagg ccacaggcat ccctggagag catggaaatc gaagggggta
     4141 atctgtgcca atatttctgc cgtatcaatg cctcccgcaa tgatgcaatt gcaacaaggg
     4201 gaaatttgcg cctagatcgc acgaataaac ggttcgaagg agcggtgcgt gatttgttgc
     4261 tgaataaaac ttttatccag catgacgcgg gtgaaaagac catcaaaaac cgctttcatt
     4321 gtgctattgc ctgctcccaa attacctaac acaaggggat acacttgcga taaggataaa
     4381 agaccgcgat tatcttttcc ttcattgaga tgcgggtaat tctcattaat caacagttca
     4441 ataaacggat attttaatag ttcgcctgcg taattatccc tctctaataa taatgtagcc
     4501 acttgtggcg ttaaattaag ccaggcaaag agtttatgtt gaataaaaaa atgttggcat
     4561 gattttagta attccaactg ctctgaaaat aattgccaat gttgctcctc ggtaagttgc
     4621 gctataaccc gactcgtcgg gatacgcacc gtgccatctt cactggagaa atgggtaatt
     4681 aactcaacgc cgacaaggac ttgctggtta tctcttatcg gcaggaaata gcaatcagaa
     4741 tgataaagat tctccaaaaa aatcttcatg gtaaccgtcc ctctcgaagg atgtttttca
     4801 gtatccggct aaaagggata aggccataag acataacaat tacagaagga gtaactttca
     4861 tttgttccat gttaaccact ttttcagggg tcttttttta gattatcctg attataaacg
     4921 aataatccat ttacggaatt tttgtctgca aaatactact gtattcagga gtaaatggac
     4981 ggcgatgtat catcgccgtc catttttcga catactagat tcgtctcgcc tgccagaaat
     5041 ttttctgcca atagacatta tcaagtgagg aacgcatcac tcccttgctg gtagaggcgt
     5101 ggataaattg gttgttggta tcgtaaatac ctacatgcaa accattttgt ccggaccccg
     5161 ttttgaaaaa gaccaggtca cctggcagca acttgtcttt atcaatttgc gtgccaatag
     5221 aggcttgttg tttggtttca cggggcagct gcaaatcgaa acgatcgcgc atcgtcacaa
     5281 ccacaaatcc cgaacagtcc acaccgcgcc gcgtcatgcc accataacga tacggcgtgc
     5341 catgccagct ttgtagctgg tcgttcaaac cggcaataac ggtaatcgaa tcagaaagtc
     5401 tggcatttgg cggcggtgct ttatggtggc tacacccggc cagaaacagt gctgtgatca
     5461 aaataaggca gaaacgcatt ccgtacggtt cctctgtttt ttattcttgc attaatttag
     5521 cgtcgtaatt acccgatttt caagatacta atgaaatcag atggtcaaaa tcagcattct
     5581 gtgaccttcg atatccagac ggcgaaaatt catcccatag gcctgcgcca gatttggcgg
     5641 cgtgagcacc tcttctctgc gtccactggc cagcattttt ccacctttta gcaaccacgc
     5701 ccgatgcgca tgacgcaacg tgtggttgag atcgtgactg ctcatcacaa tcgccagtcc
     5761 ttgctgacac agcgcgctca gaattttgtc taacgcactt tgttgcgcaa catcaagact
     5821 gttcatcggc tcatcaagaa gcagcaattg gcctgcggga ttggcttgtg gtgtgatttg
     5881 caacaccacc gcagcaagac gtacgcgttg ccattcaccg ccggaaagtt gattggtgct
     5941 acgaccgagt ttgtcatcaa gagccagcgc ccctgcgaca tcattcagta gttcggtacg
     6001 cgttttatcg tgctgatgca gtgtcaggta gtgccagacc ggcattgcaa acggcggcgt
     6061 ctgctgttgt gaaagatagg cgcgatgcag cgcgagtttt gttgcggacc atgcttccag
     6121 gggttgcccc gcgaactgaa tgcttccctt accgctggtc attccggcca ttcgtgcaag
     6181 caaggtactc ttacccgcgc cattcggccc caccaggtgc aggatctccc cagcccgaac
     6241 ctcgccagaa agtggcccca ggcgggtaga ttccgcaaca tcctgtaact gcatcacaat
     6301 agacattatt ttgccaacgc cagtttaatg ctttccatca caatggggtc ttccggcgtc
     6361 atatccgggg aaaaacgctg gatgaccaat ccgtccctgc caactaaaaa tttctcaaaa
     6421 ttccataaaa tatcatcagg gtacagcggt gcacgacctt tgctgaccat acgggcatag
     6481 aatccgctct cttccggcgc gactgcggtc ggcgctgcgg caatcaattt ttgatacagc
     6541 ggatggcgtc cttcgccgtt aacttcaatc ttactgaaca tcgggaacgt caccccccat
     6601 gtggtggtac agtaagtttt aatctcttca tcgctgcccg gttcttgttc cagaaactgg
     6661 ttgcacggga atcccagcac cacaaaacct cgatcggccc aggctttctg aatattctcc
     6721 aactgctcat attgcggcgt taagccacac tttgaggcga cattgacaat caacagcaca
     6781 ttaccggcgt acttctccag cgtggtcact tcaccgtcga tatctttcac tacggtcgtc
     6841 agaatggaat cttgcatcgt ttctcctggg tgtggtcagt aaaaatctta gcttttaatc
     6901 atagaccgtc tttttgcggc taacgtcttg cttttaacaa taaccagata aacaccggcg
     6961 cacccaacgt tgcggtgacc acgccaataa gcagctctgc ggcagctaat gccaagcgcg
     7021 ctacaatatc ggccagcagc aatgcgctcg cccctgccag cgcgcagccg ggaagtaata
     7081 cgcgatgatc ggttaaacca cacaaccgaa gaatatgtgg gatcaccaga ccaataaagc
     7141 cgatagcacc cgccagcgcc acactgacgc caaccatcca gccggtcgcg gccaccagca
     7201 cattgcgcca gaaccacagg ggtaaaccca gttgccgcgc cgagatctcg ccaagtgcta
     7261 acatattcat cggcctggac tgacaacaga tccacaacaa cacggggatc aatgccagca
     7321 tcagccagct ttgccgccag tctacgccgc caaaaccgcc catcatccag tacatcagct
     7381 gacgtaaatc aacagaggtg gaaaagtaga tagcccacgt cattagtgcg ctacagataa
     7441 tccctaatgc aacgccagcc agcaataacc gactggtcga aagatgacga cgggcgaaac
     7501 gtaagagtat taaagtaatg ataagcgcgc cagcaatcgc acacagccct agcgcccagt
     7561 tggggagttg cccttgccca agcaataccg cggcgataag ccccacgcct gcgccgttag
     7621 agacgccaag tagtccaggt tctgccagag gattttcaaa caacgcctgc attacagcgc
     7681 cggatatagc cagcgccgca ccaaccaaca atacagccag cgtacgtggc aggcgaattt
     7741 gccagacgaa cagttcgcca cgaggagtaa accagtcacc tagcgagatc cattgttcac
     7801 cggcgcaaag gcttaaaaga agcgccagca gcatcaaaac tgacaggcat aataaccagc
     7861 gaatattttg tcgctgttgt tggcgggcaa gtgtcagcat ggtatccgtt ctgctgaagt
     7921 gtcatggcgt tgattttacg gtgactcttc gacagtgaaa agaaaaaagg ccgcagagcg
     7981 gccataaaca caagtaaaaa tcaacaagtt agataattat caaagactta cagacacaca
     8041 aaaacacagc caaccacaac aaataacagg gatgtggtca ctttgtggat catatcgccg
     8101 ccataaattt acttaataac agtaaccaca gccacaagca cggccatcgc agacaggaca
     8161 atacctgtga gtaaccaagt ctgatttgca aatgatttct gaagttcagt acgatgctca
     8221 gccatctcaa ctttcagaga ctggcgtaaa tcagccatct cagacttcag ggattggcgc
     8281 gattctgcca tctcaagcct caacccttcg cgaatctcca gtacatcaga tttggtagca
     8341 aaggattcgc ttcttgtggt gagagtaatc aggttgtttt tgatttcagt cacatcactt
     8401 tccaggcaac tgacccgccg ttcaaggtcg tcattcatgc catcacctcc atcattacca
     8461 cttcctgtta cttggttgtt ggatacatta taggcattct ctttcttttt tctgaaccgc
     8521 gaaatatgtg caacattctc tgccatcact tctcatcacc ctgcttgcct acccagttca
     8581 taaaggcccg ggccgagtaa cgatgaacaa acccacatct gttacaggta agtcggaatt
     8641 catagttatg gatattttcc cgatcatgtc cctcatatcc cggataccca gtaaatggac
     8701 cgatgtaatc aagcataaca aaagtgccta aatcacactc ctcagcagtt ttcggctcag
     8761 gccccacctc aacaatattc gtcaaataca tgtacatatc cgtatcgcca cacgacaaac
     8821 atttttcatt cgtagacgac tcattgagaa aacgcgcaaa attatcgagc gttgccattc
     8881 ttttaagttc atctaaatga aacttcactc ttaagcacct cctagtggat taaacctcac
     8941 cgcatcctgc aggtaatccg gcgcaagatg ggcataaatc atcgttgtct gaatctttgc
     9001 gtgccccaga attttctgga gcgtcagaat attgccgccg ttcatca
//
LOCUS       DADMIB010000172         8960 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.174, whole genome shotgun sequence.
ACCESSION   DADMIB010000172 DADMIB010000000
VERSION     DADMIB010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8960
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.174"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..191
                     /locus_tag="JNZ89_003679"
     CDS             <1..191
                     /locus_tag="JNZ89_003679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937412.1"
                     /translation="AHFMMSGGNILALQKILGHHDIKMTMRYAHLAPDHLETALRFNP
                     LATLPSGDKVAAAVGITP"
     gene            complement(296..832)
                     /locus_tag="JNZ89_003680"
     CDS             complement(296..832)
                     /locus_tag="JNZ89_003680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8937413.1"
                     /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS
                     MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDN
                     MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD
                     RKPLSREEILRMVERVAG"
     gene            916..2124
                     /locus_tag="JNZ89_003681"
     CDS             916..2124
                     /locus_tag="JNZ89_003681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8937414.1"
                     /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
                     SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS
                     PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA
                     LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLL
                     LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
                     RYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP
                     DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD
                     TKTQTAMENS"
     gene            2124..2939
                     /gene="ybjI"
                     /locus_tag="JNZ89_003682"
     CDS             2124..2939
                     /gene="ybjI"
                     /locus_tag="JNZ89_003682"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase"
                     /protein_id="HAY8937415.1"
                     /translation="MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVAS
                     GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEV
                     EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
                     VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGDGGN
                     DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ"
     gene            3025..3309
                     /locus_tag="JNZ89_003683"
     CDS             3025..3309
                     /locus_tag="JNZ89_003683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937416.1"
                     /translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV
                     PQAVSVATVPQTVYVAPAPAPAYRPHPYARHLASVGEGMVIEHQIDDHHH"
     gene            complement(3350..4580)
                     /gene="mdfA"
                     /locus_tag="JNZ89_003684"
                     /pseudo
     CDS             complement(3350..4580)
                     /gene="mdfA"
                     /locus_tag="JNZ89_003684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308949.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdfA"
     gene            4865..5461
                     /gene="ybjG"
                     /locus_tag="JNZ89_003685"
     CDS             4865..5461
                     /gene="ybjG"
                     /locus_tag="JNZ89_003685"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HAY8937417.1"
                     /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAV
                     LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP
                     SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG
                     CLSAQIIWQAMGHKLYQRLQSWYRFCFALPIRKGWVRD"
     gene            5519..6277
                     /gene="deoR"
                     /locus_tag="JNZ89_003686"
     CDS             5519..6277
                     /gene="deoR"
                     /locus_tag="JNZ89_003686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor DeoR"
                     /protein_id="HAY8937418.1"
                     /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN
                     HSAPVVLLGGYIVLEPHSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT
                     TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT
                     LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA
                     RMGDLKRFDIVVSDCCPEDEYVKYAQTHRIKLMY"
     gene            complement(6324..7526)
                     /gene="dacC"
                     /locus_tag="JNZ89_003687"
     CDS             complement(6324..7526)
                     /gene="dacC"
                     /locus_tag="JNZ89_003687"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HAY8937419.1"
                     /translation="MTQYSSLLRGLAAGSAFLFLFAPTAFAAEQTVEAPSVDARAWIL
                     MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGN
                     PALRGSSVMFLKPGDQVSVADLNKDVIIQSGNDACIALADYVAGSQESFIGLMNGYAK
                     KLGLTNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPEEYAIHKEKEFTFNKIRQP
                     NRNRLLWSSNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEK
                     LLTWGFRFFETVTPIKPDATFVTQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASY
                     TLTEPQLTAPLKKGQVVGTIDFQLNGKSIEQRPLIVMENVEEGGFFGRMWDFVMMKFH
                     QWFGSWFS"
     gene            7820..8398
                     /locus_tag="JNZ89_003688"
     CDS             7820..8398
                     /locus_tag="JNZ89_003688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HAY8937420.1"
                     /translation="MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDE
                     SDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLV
                     RTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNV
                     GLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS"
     gene            complement(8395..>8960)
                     /locus_tag="JNZ89_003689"
     CDS             complement(8395..>8960)
                     /locus_tag="JNZ89_003689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HAY8937421.1"
                     /translation="RLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQGMAMNPWSNAL
                     WLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKD
                     SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRD
                     VRTGPDGYLYVLTDESSGELLKVSPRN"
BASE COUNT         2158 a         2307 c         2202 g         2293 t
ORIGIN      
        1 cggcgcactt catgatgtcg ggtggaaaca ttctggcctt acaaaaaatt ctcggacacc
       61 acgatataaa aatgactatg cgttacgcac atctggcacc ggatcatctg gaaacggcgc
      121 tccgtttcaa tcctctggca acgctgccaa gtggcgacaa agtggcggca gcggttggca
      181 ttaccccgta ataaccacca ctgaccacca acctaactta ttgtttttaa tctaacttat
      241 tgttttcatt aacccgttta cataaatggg ttttttgtta tctaaaattt atctactacc
      301 ctgcaaccct ctcaaccatc ctcaaaatct cctcgcgcga tagcggctta cggtcggtga
      361 caaaatgcag cgtcatcccc tcaataaacg catcaagcgc gcgggcggtt ccgggttcaa
      421 accattgttc gagcgtttgc tgactgcgct gcatccagtt ttgcattacc gtttttaata
      481 gcggttttcg gctagccagc gcgtagagct ggtacatcag ctccatatta tccggcgttg
      541 caacctgtga gctgtagatc atatcggtga tagcctggca tgcgccttga gcatcactaa
      601 catcgctaaa aaatgcctga tattgccggg acataatctc agtaaaactg ctgaacgcct
      661 ccagcaacaa ctcatcaatt cctgaaaaat agtaggtcat cgatcccaac ggtaccccgg
      721 caagggtagc aattttgcgg tgcgtaacag catgtattcc gtaaagtttc accgcctcca
      781 gcgtggcctg gataattttt tctcgccgtt gcggatcgtt agcgcgacgc atgtcatttc
      841 ctctgtctgc aattgtgtac aaatgtacac aaccttgcta atgttgtctt ccctcttctt
      901 attttgacgt gatctatgac cgtaaattct tcacgtaatg cattgaaacg ccgaacctgg
      961 gcgctgttta tgttcttctt tttgccaggc ctgttaatgg cgtcctgggc aacccgtacg
     1021 cctgctatcc gcgatattct ctctgtctcg atcgctgaaa tgggcggtgt tctctttggt
     1081 ctgtcgatcg gttcgatgag cggtattctc tgctcggcgt ggttagtgaa acgctttggg
     1141 acacgtaatg tcatcctggt cacgatgtcc tgcgcattga tcgggatgat gatattaagt
     1201 ctggcactct ggctgacatc gcccctgctc tttgccgttg gtctcggcgt ctttggggca
     1261 agttttggtt ctgcggaagt ggcgataaac gttgaaggtg ccgccgttga gcgagaaatg
     1321 aataaaacgg ttttgccgat gatgcacggt ttttatagcc tgggcacgct ggcaggcgct
     1381 ggtgtcggga tggcactgac ggcctttggc gttccggcaa cggtgcacat tttattggcg
     1441 gcgctggtag gtatcgcgcc tatttatatc gccattcagg caatccctga cggtacgggc
     1501 aaaaatgctg ccgatggcac ccagcatggc gaaaaaggca ttccttttta tcgcgatatc
     1561 cagttgctgt tgattggtgt tgtagtgctg gcgatggcct ttgccgaagg ttctgccaac
     1621 gactggttac ccttattaat ggttgacggt cacggtttta gccctacttc cggctcgctg
     1681 atttatgccg gttttaccct ggggatgacc gttggacgct tcactggcgg ttggttcatc
     1741 gaccgttaca gtcgcgttgc cgtggttcgg gccagtgcac taatgggggc gttgggtatt
     1801 gggctgatta tttttgtcga tagcgcctgg gtcgctgggg tgtctgttgt actctgggga
     1861 ctgggtgcct cgctgggctt cccgctgacc atttctgccg ccagcgatac cggccccgat
     1921 gcaccaaccc gcgtcagtgt ggtagcaacg accggttatc tggctttcct cgtcgggccg
     1981 ccgctgctgg gctatctcgg cgaacattat ggattacgta gtgcaatgct ggttgtactg
     2041 gcgctggtta ttctcgcggc tattgtcgcg aaagccgtcg ccaaacccga taccaaaacg
     2101 cagacggcga tggagaatag ttgatgagca ttaaattaat tgcggtagac atggatggta
     2161 ctttcttaag cgatcaaaaa acctataacc gtgagcggtt tatggctcag tatcagcaaa
     2221 tgaaagcaca aggcattcgc tttgtggtcg ccagcgggaa tcaatattat cagttgatct
     2281 ctttcttccc tgaaattgct aatgaaattg cctttgtggc tgaaaacggc ggctgggtag
     2341 tgagtgaagg caaagatgtt tttaatggcg agctgtcgaa ggatgccttt actactgtcg
     2401 tggaacattt gctgacgcgc ccggaagtgg aaattattgc ctgcggaaaa aatagcgcct
     2461 atacgctcaa aaaatatgac gatgccatga aaacggtggc ggaaatgtat tatcaccgtc
     2521 tggaatacgt tgataacttt gacaacttag aagatatttt ctttaagttt ggcctgaatc
     2581 tttccgatga actgattcca caagtacaaa aagcattaca tgaggccatc ggcgatatta
     2641 tggtgccagt ccacaccggc aacggcagca tcgatctgat tatccccggc gtacataaag
     2701 ccaatggcct tcgccaactg cagaaattat ggggaataga cgacagcgaa gtggtggtct
     2761 ttggcgatgg cggtaacgat attgagatgc tgcgtcaggc aggctttagt tttgcaatgg
     2821 aaaatgccgg cagcgcggtc gtcgcagcgg caaaataccg ggcaggctcc aataaccgtg
     2881 aaggcgtact ggatgtgatc gataaagtgc ttaaacacga agcgccattt gaccaataaa
     2941 aacggcagca cgcccggcaa cacaatacct gaatgaaggc tgcataattc gcggaaatta
     3001 acccgctgca ttatttcagg cgaaatgatt atgaaaaatt gtctactgtt gggcgcgctt
     3061 ttaatgggct ttactggtgt ggcgatggcg caaagtgtca ccgtcgatgt gccgagtgga
     3121 tacaaagtgg ttgtagttcc tgattcagtc agcgttccac aagcggtcag cgtcgcgact
     3181 gtgccgcaaa ccgtctatgt ggctcctgcg ccagctccgg cttaccgccc gcatccttat
     3241 gctcgccatc ttgccagcgt aggtgaaggg atggttatcg aacaccagat tgacgaccat
     3301 caccattaat tcgagaatgc ctgatcgcac aaagcagtca ggcatttttt tacccttcgt
     3361 gagaatttcc catctgttta tcttttaaaa agataaccat cagcgacagc cacaaaattc
     3421 cgttgacaag gttgaagaga ttaaactgtc cgttgccccc gttcagccag gcatgtttgc
     3481 tgatttcaat accaacggta aagatcagca tttgcagcat tcccatcgcc gcagaaaccg
     3541 tacctttact catatcgctg gcaaacaggg ttaatcgcac cagtcccgca ttcgccagac
     3601 caataccgaa agcataaata cttaacccgg cagtcatcca taaatacgcg tgcgatgaga
     3661 taaccgttgc cgcagcagcg accaacagac caatcataat cggccagccg cccataatta
     3721 tcagcgaacg tacggtgcgg cacgaggtca gacgcgctaa cagcaagtta cccgcaatta
     3781 acgccccgaa aataggcact tgcagcaagc catattcata gctgctcaac tgctcgccgg
     3841 taatgatgat aatcggcgac tgggcgatcc acgccagcaa tggcaggcta acgaatccca
     3901 gcgccagcgc ccccgccaca aagcggccgt tcttcagcac cagcttatag tcacgaccga
     3961 gttctttcag tgacagtttc tcgcctatac gcgtggcggt ttcaggcata gctcgttgca
     4021 gaccgaaaaa ggagatcgct gccaatgcgg caaacaaaac aaacatcccc tcccagggca
     4081 gcacatggat ccacgccgcg cccaccagcg gaccaagtag cggagcaatc agcgccacgt
     4141 tcgccatcag cgcggtgatc ttgatacaaa ccgcctcttc gaaagattcc tgaattgcgg
     4201 cgtatcccac agcgccaatg aaacagaggc ttatgccctg caagaagcgc aacagagtga
     4261 attgttcaat gttttgcgcc agtaatattg ccagacaggt gatgataaac cacaccaccc
     4321 ccgccagcat caccggacgg cgaccaatac gatccgacag cggccccagg agccattgta
     4381 aaaacatccc gcccgccaga tatgcggtca ttgaagtagg aacccaatca atgcccgcct
     4441 gatattgttc caccacggcc aacataccgg gttgaatcat atctgccgat ataggttgaa
     4501 aattcgtaaa gcaccagaca gagagggaaa agtaacgcct gacgtccaag cctggcaccg
     4561 gaagctaatt tattttgcat gcaatttctt cgccaataat aatcgcgcag agtttaataa
     4621 aagcgcagct aacgagaaag cgaattttgt agctgaaacc acggttaagc acattcttac
     4681 attattgcga gtatagctac gctttcttta agttttattt aacctatgcc cgttacaatc
     4741 acccaccgta aacaggccgc ttgagggaaa taagacgatg ccgctttacc cagtttaacc
     4801 tgcactttat tctcaacgac ttgcctgtat tggctccctt ttaatcactt tgcgtcggga
     4861 agttatgctg gaaaatttga atctctctct attctctctt attaacgcga cgccagactc
     4921 ggctccgtgg atgatctcgt tggcgatttt tattgctaaa gatttgatta ccgtggtgcc
     4981 gctgctggcc gcggtgcttt ggttgtgggg gcttacagca caacggcaac tggtgataaa
     5041 aatcgctatc gcgctggcgg tcagcctgtt tgtgtcctgg acgatgggac atctttttcc
     5101 gcacgaccga ccctttgtcg aaaatatcgg ctataacttc ctgcatcatg cggcggatga
     5161 ctcattccca agcgaccacg gtacggtgat tttcaccttt gcactggcat ttttatgctg
     5221 gcatcgcctg tggtccggct cacttttaat ggtgctggcc gtcgtcattg cctggtcgcg
     5281 cgtttatctt ggcgtccact ggccgctgga tatgctcggt ggattgctgg caggtatgat
     5341 tggctgcctt agtgcccaga ttatctggca agcgatgggg cataaactct atcaacgtct
     5401 gcaatcgtgg tatcgcttct gttttgcatt accgatccgc aaaggctggg tgcgtgactg
     5461 atctctgcta aaaagtgtag tattgagcgg ctcgcttcaa taactattca gagggattat
     5521 ggaaacacgt cgcgaagagc gtatcgggca gctgctgcaa gaattaaaac gcagcgataa
     5581 gttacatctt aaagacgccg ccgccctgct tggggtttcg gagatgacga ttcgtcgcga
     5641 tctgaacaac cacagtgcgc ccgtcgtttt gctcggcggc tatattgttc tggaaccgca
     5701 tagtgccagc cattacctgt taagcgatca aaaatcccgc ctggtggaag aaaaacgccg
     5761 ggcggcaaaa ctggctgcga cactggtaga acccgatcag accctctttt ttgactgtgg
     5821 caccaccacg ccgtggatta ttgaagcgat tgataatgaa atccctttta ccgccgtttg
     5881 ttattcgcta aatacctttc tggcgctgaa agagaaaccc cattgccgcg catttctgtg
     5941 cggtggtgaa tttcacgcca gcaacgccat tttcaaaccc atcgattttc agcaaacgtt
     6001 gaataatttt tgcccggata tcgcttttta ttccgcggcg ggcgtgcatg tcagtaaagg
     6061 cgctacctgt tttaatcttg aagagttgcc ggtaaaacac tgggccatgt cgatggcgca
     6121 aaagcatgtg ctggttgtcg accacagtaa atttggcaag gtccgtccgg cgcgcatggg
     6181 tgacctgaaa cgctttgata ttgtggtgag tgattgttgc ccggaagatg agtatgtgaa
     6241 gtacgcgcag acgcaccgta ttaagttgat gtattaatga cgtataaccg gatgacgttt
     6301 cgcgccatcc ggttatcaga agattaagag aaccagctgc cgaaccactg atggaatttc
     6361 atcatcacga aatcccacat ccgaccaaag aatccgccct cttccacatt ttccatcacg
     6421 atcagcggac gctgctcaat ggatttaccg ttaagctgga aatcaatggt cccgacaacc
     6481 tgaccttttt tcagcggtgc ggtaagctgc ggttccgtta acgtgtagct cgccttcagg
     6541 tttttcagct gcccacgcgg tatggtcact gagcccgctt cgcctgcccc gagattcact
     6601 tcgctcttat caccaaacca gacgcgctga gtcacaaagg tggcatcagg tttaattggc
     6661 gtcacggttt caaagaagcg gaaaccccag gtcaataatt tctcagactc attaaaacgg
     6721 atacggtcag ttttcgcccc caacactacg gagattaaac gcatatcgcc ctgggtagcc
     6781 gaagcaacca gattatatcc cgcgcctgcc gtggttcctg tcttcatgcc atcaacattc
     6841 agattgctgc tccacagcag acggttacgg ttaggctgac gaattttgtt gaaggtgaac
     6901 tctttctctt tatgaatggc gtactcttcc ggcacatcgt ggatcaatgc tttacccagc
     6961 aatgccatat cgcgcgcggt actgaactgc cccggcgcat ccaggccgtg caccgtctgg
     7021 aaggtagtgt tggtcagacc cagttttttg gcataaccat tcatcagacc aataaatgac
     7081 tcctggctcc cggcaacgta atcggccagc gcaatacagg cgtcattacc ggactggata
     7141 atcacatctt tgttcaagtc tgccaccgaa acctgatcgc ccggtttgag gaacattacc
     7201 gatgaaccac gcagtgccgg atttcccgtc gcccaggcat ctttaccgac cgtcaccata
     7261 tcggtgagtt taatcttatc ggccttaagc gcctgcccaa ccacatagct ggtcatgatt
     7321 ttagtcaggc tcgcgggatc cagtttctca tccgcattgc cttctgccag cactttaccg
     7381 ctggcgtaat ccattaaaat ccatgcacgc gcatccacgc tcggcgcttc aacggtttgt
     7441 tcggccgcga atgccgttgg ggcaaaaagg aataaaaatg cagaacccgc tgcaagacca
     7501 cgaaggagag aggagtattg cgtcataaat gccacccgag tatccattca aaaaaaatac
     7561 gttatatcgc cgtatgataa gttcggtgat taataacgca cacacaaact taaagaaacc
     7621 gtaagttggt aaagttttta aagtttatgc aatatcctgc cgcttcgctg cttctggtgt
     7681 catttttttg ccagctgttg cttaaaagtt aactttactt caccatcgga gtcctgttca
     7741 gcctgtggct gcctgtcgga aaaggggtga gtatgattac gctgtggggt cggaataatt
     7801 caaccaacgt aaaaaagtat tgctgacgct cgaagaactg gaactacctt atgagcaaat
     7861 tctcgcgggc cgtgagtttg ggataaatca cgatgctgat tttctggcga tgaaccctaa
     7921 cgggctggtg ccgttgttgc gtgacgacga aagtgatctc attctttggg aatcaaacgc
     7981 cattgtccgc tatctggcgg cacagtacgg gcaaaaacgc ctgtggatcg actcaccggc
     8041 acgtcgtgcg gaagcggaaa aatggatgga ctgggcaaac cagacgctca gtaatgccca
     8101 tcgagggatc ctgatgggat tagtcagaac accaccggaa gagcgcgatc aggccgccat
     8161 tgatgccagt tgcaaagagt gcgacgccct gtttgccctg ctcgatgcgg aactggcaaa
     8221 agtaaaatgg ttctctggcg acgagtttgg tgtgggcgat atcgctatcg caccgttcat
     8281 ctacaatttg tttaacgttg gcctgacctg gacaccgcgt ccaaatctgc aacgctggta
     8341 tcagcaactc actgaacgcc ccgcagtgcg caaagtggtg atgattcccg ttagctaatt
     8401 gcgtgggcta actttaagta attccccact ggactcgtcg gtgagaacgt ataaataacc
     8461 gtcgggtcca gtgcgaacat cacgaattcg ctgccctctg tccgttaaaa tacggccatc
     8521 ttctgtcact ttgtcgccgt tgacgctcat cacaatgaca tctttatctt tcagcgcgcc
     8581 aataaataat ttttgctgcc actgggggaa tttatcgctg ttatagaagg ccatgccgct
     8641 cacagcgggc gaatctttcc agtaaaaaac aggttgctcg gtcccggcga cgatctcccc
     8701 tttcgcttcc ggtatcttaa agcctgaata gttgattccc caggttgcca gcggccagcc
     8761 gtagtttttg cctttttgcg ggatattaat ttcatcacca ccgcgcgggc catgttcatt
     8821 cagccacagt gcattactcc acggattcat cgccattcct tgcggattac gaatgccata
     8881 agaccagatc tcggcgcgcg caccggattc ctttataaaa ggattatcat ccgggatttc
     8941 gccctgatcg gtcagacgca
//
LOCUS       DADMIB010000173         8733 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.175, whole genome shotgun sequence.
ACCESSION   DADMIB010000173 DADMIB010000000
VERSION     DADMIB010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8733
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.175"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            243..1154
                     /gene="ttdA"
                     /locus_tag="JNZ89_003690"
     CDS             243..1154
                     /gene="ttdA"
                     /locus_tag="JNZ89_003690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit alpha"
                     /protein_id="HAY8937422.1"
                     /translation="MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAE
                     TSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVE
                     EATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPG
                     RSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPI
                     GSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTG
                     CWAHRRGTLLVHADLTFENLSHTRSAL"
     gene            1151..1756
                     /gene="ttdB"
                     /locus_tag="JNZ89_003691"
     CDS             1151..1756
                     /gene="ttdB"
                     /locus_tag="JNZ89_003691"
                     /EC_number="4.2.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit beta"
                     /protein_id="HAY8937423.1"
                     /translation="MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELK
                     RPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGK
                     GGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRGKEF
                     GPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK"
     gene            1805..3268
                     /locus_tag="JNZ89_003692"
     CDS             1805..3268
                     /locus_tag="JNZ89_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-tartrate/succinate antiporter"
                     /protein_id="HAY8937424.1"
                     /translation="MKPSTEWWRYLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVI
                     VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVFGFSNSV
                     IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA
                     RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL
                     IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETEL
                     QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSN
                     KAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRY
                     FFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG
                     SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL"
     gene            complement(3311..4324)
                     /gene="tsaD"
                     /locus_tag="JNZ89_003693"
     CDS             complement(3311..4324)
                     /gene="tsaD"
                     /locus_tag="JNZ89_003693"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HAY8937425.1"
                     /translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP
                     ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
                     NVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
                     AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
                     ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR
                     AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL
                     PAA"
     gene            4561..4776
                     /gene="rpsU"
                     /locus_tag="JNZ89_003694"
     CDS             4561..4776
                     /gene="rpsU"
                     /locus_tag="JNZ89_003694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HAY8937426.1"
                     /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
                     RKRAKASAVKRHAKKLARENARRTRLY"
     gene            4887..6632
                     /gene="dnaG"
                     /locus_tag="JNZ89_003695"
     CDS             4887..6632
                     /gene="dnaG"
                     /locus_tag="JNZ89_003695"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY8937427.1"
                     /translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHN
                     EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG
                     SGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGF
                     APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF
                     GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY
                     GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ
                     LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS
                     TLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT
                     MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR
                     GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE
                     ERLELWTLNQELAKK"
     gene            6827..8668
                     /gene="rpoD"
                     /locus_tag="JNZ89_003696"
     CDS             6827..8668
                     /gene="rpoD"
                     /locus_tag="JNZ89_003696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HAY8937428.1"
                     /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
                     IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM
                     REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD
                     LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAR
                     EKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM
                     MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS
                     EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK
                     KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
                     RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME
                     TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID
                     MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
BASE COUNT         2109 a         2329 c         2334 g         1961 t
ORIGIN      
        1 ctgcaagtct ttggctaaag gccagctatt cagcatcgtt aattatccgc agttgtgata
       61 agcgcagtgt atttcgcaaa acattgccat tccctgctct ggcgcaatat tcattcttat
      121 tttcgcgttg attcacgaac tgttaattac atattcacgg tggcaaaaaa tataaaacca
      181 catttttagt ggtagtttat ggcggtgaat ttttccagac aaatacaaaa actggagttg
      241 ccatgatgag cgaaagtaat aagcaacagg cagtgaataa gttgacagag attgtcgcta
      301 actttaccgc catgatttct acccgaatgc ctgatgacgt ggtggataaa ctaaaacagc
      361 taaaggatgc cgaaacgtcg tcgatgggga aaattatcta ccatacgatg ttcgacaaca
      421 tgcaaaaagc gattgacctg aatcgtcctg cctgtcagga caccggggag attatgttct
      481 tcgttaaagt cggttcccgc ttcccactgc ttggcgagct gcaaagcata ctcaaacaag
      541 ccgtggaaga ggcaaccgtc aaagcgccac tacgtcacaa tgcggtagaa atttttgacg
      601 aagtaaacac cggcaaaaat accggtagcg gcgtaccgtg ggtcacctgg gacatcatcc
      661 ccgacaatga cgatgcggaa atcgaagttt acatggcagg tggcggctgc acgctacctg
      721 gccgctcgaa agtgttaatg ccgtcagaag gctacgaagg cgtggtgaaa ttcgtcttcg
      781 aaaatatctc caccctcgcc gtaaacgcct gtccaccggt actggtgggc gtgggcatcg
      841 ccacctcggt ggaaaccgcc gccgtactct cgcgtaaagc cattttgcgc ccgattggca
      901 gccgccatcc caatccaaaa gcggcagaac tggagctacg cctggaagaa ggactcaacc
      961 gtctggggat tggtccacaa gggctgactg gcaacagttc agtgatgggc gtacatatcg
     1021 aatctgccgc ccgccatccg tcaaccatcg gcgttgctgt ctctaccggc tgctgggcgc
     1081 atcgtcgcgg cacactgctg gttcatgccg atctcacctt tgaaaatctg tctcacaccc
     1141 ggagcgcgtt atgaaaaaga tcctgacaac cccgatcaaa gctgaagatc tgcaagatat
     1201 tcgcgtcggc gatgtgatct acctgaccgg tacgctggtg acctgccgtg acgtttgtca
     1261 ccgccgcttg atcgaactga aacgtccgat cccttacgat ctcaacggca aagcgatttt
     1321 ccacgctggc cccatcgtgc gcaaaaacgg cgataaatgg gagatggttt ccgttggccc
     1381 gacaaccagt atgcgtatgg aaagttttga acgtgaattt atcgagcaga ccggcgtgaa
     1441 actggtggtt ggcaaaggcg gaatggggcc gctgaccgaa gaaggctgcc agaaattcaa
     1501 ggcgctacat gtgattttcc cggcaggctg cgcggtgctg gcggcaaccc aggtggaaga
     1561 gattgaagaa gtgcactgga cagagctcgg aatgccggag tcgctgtggg tctgccgggg
     1621 caaagagttc ggcccgctga ttgtctctat tgatacccac ggcaacaatc tgatagccga
     1681 aaacaaaaag ctgttcgccg aacgccgcga tcccatcgtg gaagagatct gcgagcacgt
     1741 ccattacatc aaataaccct cccggagagg ctcgccccct ctcctttttc gcaggcataa
     1801 cacgatgaaa ccttccactg aatggtggcg ataccttgcg ccgctggcgg tcatcgccat
     1861 tattgctcta attccggttc ccgcagggct ggagagtcat acctggctct actttgccgt
     1921 ttttactggc gtgatcgttg gactgatcct cgaacccgtg ccgggtgccg tggtggcgat
     1981 ggtgggtatc tccatcatcg ccatactctc tccctggctg ctgttcagcc ccgaacagct
     2041 cgcccagcca ggctttaagt tcaccgccaa atccctctcc tgggcagttt ttggtttttc
     2101 taattcggtt atctggctca ttttcgccgc ctttatgttt ggcacaggct atgaaaaaac
     2161 cgggcttgga cgccgcattg cgctgattct ggtgaaaaag atgggacatc gcacgctgtt
     2221 tctcggctat gcggtgatgt tctccgagct gatcctcgca cctgtaacac cgtccaactc
     2281 ggcgcgtggt gcggggatta tctatcccat catccgtaac ctgccaccgc tctatcaatc
     2341 acaaccaaac gacagcagtt cgcgcagcat tggctcgtac atcatgtgga tggggattgt
     2401 tgccgactgc gtgaccagcg ccattttctt gacggcgatg gcaccaaact tgctgttaat
     2461 tggactgatg aaaagcgcat ctcacgccac gctgagttgg ggcgactggt tcctcgggat
     2521 gttgccgctc agtattttgc tggtgctgct ggttccctgg ctggcttatg tgctgtaccc
     2581 gccggtactg aagtctggcg atcaggtgcc gcgctgggca gagacggaac tgcaggcaat
     2641 gggcccgctc tgttcgcgtg aaaaacggat gctggggctg atggtaggcg cgctggtgct
     2701 gtggattttc ggcggtgatt atatcgatgc cgcgatggtc ggttacagcg tggtggcact
     2761 gatgctgctt ctgcgcatta tcagttggga cgacattgtc agtaataaag cggcgtggaa
     2821 cgttttcttc tggctggcct cgcttatcac cctcgctacc ggactcaaca acactggttt
     2881 tattagctgg tttggcaaac tgttagcagg cagcttaagc ggttattcgc caacgatggt
     2941 gatggtggcg ttgattgtgg tgttttatct gctgcgctac tttttcgcca gcgccacggc
     3001 gtatacctcc gccctcgcac cgatgatgat tgccgctgcg ctggcgatgc cggaaatccc
     3061 gctgccggtg ttctgcctaa tggttggcgc ggcaattggt ctggggagca ttcttacacc
     3121 atacgccacc ggacccagtc cgatttacta cggtagtggt tatctgccaa cggcggatta
     3181 ctggcgactg ggggcgattt ttgggctgat attcctcgtg ttgctggtga ttaccggctt
     3241 actgtggatg cccgtggtgt tgctttaagt gaggacggtg ccggaaattg ctctccggca
     3301 cccaatagtt ttacgcagcc ggtaactccg ccagcggcca gcgcggacgc acgctaacgc
     3361 cgagatccgc cgtcgcgcct gctttaaacc gcaccattcc ggcataggcg atcatcgcgc
     3421 cgttatcagt acaaaactcc ggacgcgcgt agaacacttc gccgcggcgt tttttcatca
     3481 tttccgccag cttcgcccgt aacgtgcggt tagcactcac gccgcccgcc atgaccagtc
     3541 gcttaaagcc cgtctgatcc aacgctcgct tacacttaat catcaacgta tcgaccaccg
     3601 catcttcaaa ggcgcgggcg atatcagcac gcgtctggtc gtcggtgccg ttgtcacgaa
     3661 tcgtgttcgc cgcaaaggtt ttcagaccag aaaagctgaa atccagcccc ggacggtcgg
     3721 tcatcggacg cgggaaaaca aagcgcccgg cagtaccctg agccgccatt ttcgacagta
     3781 acggtccgcc aggataatcc agccccagca gcttcgcggt tttatcaaac gcttcaccgg
     3841 cggcatcatc gatagactcg ccgagcagct cgtactgacc aatgccagtc acgctgatta
     3901 actgcgtatg accgccggac accagcagcg cgacaaacgg aaattccggc gggttatctt
     3961 ccagcatcgg cgctaacaga tgcccttcca tatggtgtac cgggattgcc ggaacgttcc
     4021 aggcaaacgc cagagaacgc cccacggttg cgccaaccag cagtgcgccg actaatccag
     4081 ggcctgcggt ataggccaca gcatcaatgt cttttgccgt taagccagac tcctttagcg
     4141 ccgcctggat caacggtacg gttttgcgca cgtgatcgcg ggaggccagt tcaggcacga
     4201 cgccgccgta gtcagcgtgc aatttcacct gactatacaa ttggttggct aacaaacctt
     4261 tttcatcgtc gtaaatggcg atgccggttt catcgcagga agtttcaata cccagtacac
     4321 gcatgacttg ttttacctcg ctttattacc gcgcagtgta ggaccaatgc gggttgatgt
     4381 aaaactttgt tcgcccctgg agaaagcctc gtgtatactc ctcaccctta taaaagtccc
     4441 tttcaaaaag gccgcggtgc tttacaaagc agcagcaatt gcagtaaaat tccgcaccat
     4501 tttgaaataa gctggcgttg atgccagcgg caaaccgaat taatcaaagg tgagaggcac
     4561 atgccggtaa ttaaagtacg tgaaaacgag ccgttcgacg tagctctgcg tcgcttcaag
     4621 cgttcctgcg aaaaagcagg tgttctggcg gaagttcgtc gtcgtgagtt ctatgaaaaa
     4681 ccgactaccg aacgtaagcg cgctaaagct tctgcagtga aacgtcacgc gaagaaactg
     4741 gctcgcgaaa acgcacgccg cactcgtctg tactaattcc ccgagagcgt tgctctccga
     4801 tcagaccgag ttgtagttgt aaggccgtgc ttccgaaagg aatgcgcggc ttattttcgt
     4861 ttatgaattg ctaaaaatcg gggcctatgg ctggacgaat cccacgcgta ttcattaatg
     4921 atctactggc acgcactgac atcgtcgatc tgatcgatgc ccgtgtgaag ctgaaaaagc
     4981 agggcaagaa tttccacgcg tgttgtccat tccacaacga gaaaaccccg tcattcaccg
     5041 ttaacggtga gaaacagttt taccactgct ttggatgtgg cgcgcacggc aacgcgatcg
     5101 acttcctgat gaactacgac aagcttgagt tcgtcgaaac ggtcgaagag ctggcagcaa
     5161 tgcacaatct tgaagtgcca tttgaagcag gcagcggccc cagccagatc gagcgccatc
     5221 agaggcaaac gctttatcag ttgatggacg gtctgaatac gttttaccaa caatctttac
     5281 aacaacctgt tgccacgtct gcgcgccagt atctggaaaa acgcggatta agccacgagg
     5341 ttatcgctcg ctttgcgatt ggttttgcgc cccccggctg ggacaacgtc ctgaagcggt
     5401 ttggcggcaa tccagaaaat cgccagtcat tgattgatgc ggggatgttg gtcactaacg
     5461 atcagggacg cagttacgat cgtttccgcg agcgggtgat gttccccatt cgcgataaac
     5521 gcggtcgggt gattggtttt ggcgggcgcg tgctgggcaa cgataccccc aaatacctga
     5581 actcgccgga aacagacatt ttccataaag gccgccagct ttacggtctt tatgaagcgc
     5641 agcaggataa cgctgaaccc aatcgtctgc ttgtggtcga aggctatatg gacgtggtgg
     5701 cgctggcgca atacggcatt aattacgccg ttgcgtcgtt aggtacgtca accaccgccg
     5761 atcacataca actgttgttc cgcgcgacca acaatgtcat ttgctgttat gacggcgacc
     5821 gtgcaggccg tgatgccgca tggcgagcgc tggaaacggc gctgccttac atgacagacg
     5881 gccgtcagct acgctttatg tttttgccgg atggcgaaga ccctgacacg ctggtacgaa
     5941 aagaaggtaa agaagcgttt gaagcgcgga tggagcaggc gatgccactc tccgcatttc
     6001 tgtttaacag cctgatgccg caagttgatc tgagtacccc tgacgggcgc gcacgtttga
     6061 gtacgctggc actgccattg atatcgcaag tgccgggcga aacgctgcga atatatcttc
     6121 gtcaggaatt aggcaacaaa ttaggcatac ttgatgacag ccagcttgaa cgattaatgc
     6181 caaaagcggc agagagcggc gtttctcgcc ctgttccgca gctaaaacgc acgaccatgc
     6241 gtatacttat agggttgctg gtgcaaaatc cagaattagc gacgttggtc ccgccgcttg
     6301 agaatctgga tgaaaataag ctccctggac ttggcttatt cagagaactg gtcaacactt
     6361 gtctctccca gccaggtctg accaccgggc aacttttaga gcactatcgt ggtacaaata
     6421 atgctgccac ccttgaaaaa ctgtcgatgt gggacgatat agcagataag aatattgctg
     6481 agcaaacctt caccgactca ctcaaccata tgtttgattc gctgcttgaa ctgcgccagg
     6541 aagagttaat cgctcgtgag cgcacgcatg gtttaagcaa cgaagaacgc ctggagctct
     6601 ggacattaaa ccaggagctg gcgaaaaagt gatttaacgg cttaagtgcc gaagagcgat
     6661 cgggaagccc ccgacagccg cactgagagg cagcggcaaa tatataagta cgccctcgta
     6721 attatcgttg gcggtaaaca accgttggat ttcagcgtta acggctgaag gacatcgggt
     6781 caatcgccca acaccaacct catgaaataa gtgtggatac cgtcttatgg agcaaaaccc
     6841 gcagtcacag ctgaaacttc ttgtcacccg tggtaaggag caaggctatc tgacctatgc
     6901 cgaggtcaat gaccatctgc cggaagatat cgtcgattca gatcagatcg aagacatcat
     6961 ccaaatgatc aacgacatgg gcattcaggt gatggaagaa gcaccggatg ccgatgatct
     7021 gatgctggct gaaaacaccg cggacgaaga tgctgccgaa gccgccgcgc aggtgctttc
     7081 cagcgtggaa tctgaaatcg ggcgcacgac tgacccggta cgcatgtaca tgcgtgaaat
     7141 gggcaccgtt gaactgttga cccgcgaagg cgaaattgac atcgctaagc gtattgaaga
     7201 cgggatcaac caggttcaat gctccgttgc tgaatatccg gaagcgatca cctatctgct
     7261 ggaacagtac gatcgtgttg aagcagaaga agcgcgtctg tccgatctga tcaccggctt
     7321 tgttgacccg aacgcagaag aagatctggc acctaccgcc actcacgtcg gttctgagct
     7381 ttcccaggaa gatctggacg atgacgaaga tgaagacgaa gaagatggcg atgacgacag
     7441 cgccgatgat gacaacagca tcgacccgga actggctcgc gaaaaatttg cggaactacg
     7501 cgctcagtac gttgtaacgc gtgacaccat caaagcgaaa ggtcgcagtc acgctgccgc
     7561 tcaggaagag atcctgaaac tgtctgaagt attcaaacag ttccgcctgg tgccgaagca
     7621 gtttgactac ctggtcaaca gcatgcgcgt catgatggac cgcgttcgta cgcaagaacg
     7681 tctgatcatg aagctctgcg ttgagcagtg caaaatgccg aagaaaaact tcattaccct
     7741 gtttaccggc aacgaaacca gcgatacctg gttcaacgcg gcaattgcga tgaacaagcc
     7801 gtggtcggaa aaactgcacg atgtctctga agaagtgcat cgcgccctgc agaaactgca
     7861 gcagattgaa gaagaaaccg gcctgaccat cgagcaggtt aaagatatca accgtcgtat
     7921 gtccatcggt gaagcgaaag cccgccgtgc gaagaaagag atggttgaag cgaacttacg
     7981 tctggttatt tctatcgcca agaaatacac caaccgtggc ttgcagttcc ttgacctgat
     8041 tcaggaaggc aacatcggtc tgatgaaagc ggttgataaa ttcgaatacc gccgtggtta
     8101 caagttctcc acctacgcaa cctggtggat ccgtcaggcg atcacccgtt ctatcgcgga
     8161 tcaggcgcgc accatccgta ttccggtgca tatgattgag actatcaaca aactcaaccg
     8221 tatttctcgc cagatgctgc aagagatggg ccgtgaaccg acgccggaag aactggctga
     8281 acgtatgctg atgccggaag acaagatccg caaagtgctg aagatcgcca aagagccaat
     8341 ctccatggaa acgccgatcg gtgatgatga agattcgcat ctgggggatt tcatcgagga
     8401 taccaccctc gagctgccgc tggattctgc gaccaccgaa agcctgcgtg cggcaacgca
     8461 cgacgtgctg gctggcctga ccgcgcgtga agcgaaagtt ctgcgtatgc gtttcggtat
     8521 cgatatgaac accgaccaca cgctggaaga agtgggtaaa cagttcgacg ttacccgcga
     8581 acgtatccgt cagatcgaag cgaaggcgct gcgcaaactg cgtcacccga gccgttctga
     8641 agtgttgcgt agcttcctgg acgattaatc ggtaggccgg atcaggcgtt acgccgcacc
     8701 cggcactagt ccctctgcac aaacgccacc ttt
//
LOCUS       DADMIB010000174         8724 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.176, whole genome shotgun sequence.
ACCESSION   DADMIB010000174 DADMIB010000000
VERSION     DADMIB010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8724
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.176"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            134..199
                     /locus_tag="JNZ89_003697"
     CDS             134..199
                     /locus_tag="JNZ89_003697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937429.1"
                     /translation="MYIFITHFFTEYVIFKYLLPI"
     gene            338..949
                     /gene="ruvA"
                     /locus_tag="JNZ89_003698"
     CDS             338..949
                     /gene="ruvA"
                     /locus_tag="JNZ89_003698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HAY8937430.1"
                     /translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE
                     AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
                     EREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE
                     QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL"
     gene            958..1968
                     /gene="ruvB"
                     /locus_tag="JNZ89_003699"
     CDS             958..1968
                     /gene="ruvB"
                     /locus_tag="JNZ89_003699"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HAY8937431.1"
                     /translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF
                     IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
                     NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
                     TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG
                     TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
                     FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE
                     MP"
     gene            complement(2018..2803)
                     /gene="znuB"
                     /locus_tag="JNZ89_003700"
     CDS             complement(2018..2803)
                     /gene="znuB"
                     /locus_tag="JNZ89_003700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HAY8937432.1"
                     /translation="MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
                     GVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLALDTLLGIMAHSALSLGLVVVS
                     LMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFV
                     DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
                     LVGMVAVTGGLTFSAFYDTPAGPSVVLCAALLFIISMMKKQAS"
     gene            complement(2800..3555)
                     /gene="znuC"
                     /locus_tag="JNZ89_003701"
     CDS             complement(2800..3555)
                     /gene="znuC"
                     /locus_tag="JNZ89_003701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HAY8937433.1"
                     /translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS
                     TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL
                     PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY
                     DLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG
                     PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS"
     gene            3634..4566
                     /gene="znuA"
                     /locus_tag="JNZ89_003702"
     CDS             3634..4566
                     /gene="znuA"
                     /locus_tag="JNZ89_003702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HAY8937434.1"
                     /translation="MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIAD
                     GVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLLGAKQV
                     TIAQLEDVKLLLMKSIHGDDDDHDHAEKSEEDHHHGDFNMHLWLSPEIARATAVAIHG
                     KLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFG
                     LTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG
                     TLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD"
     gene            4582..5904
                     /gene="mepM"
                     /locus_tag="JNZ89_003703"
     CDS             4582..5904
                     /gene="mepM"
                     /locus_tag="JNZ89_003703"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HAY8937435.1"
                     /translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD
                     ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST
                     GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE
                     TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ
                     WQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN
                     GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE
                     VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP
                     HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD"
     gene            6024..6995
                     /gene="lpxM"
                     /locus_tag="JNZ89_003704"
                     /gene_synonym="msbB"
     CDS             6024..6995
                     /gene="lpxM"
                     /locus_tag="JNZ89_003704"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416369.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY8937436.1"
                     /translation="METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMVGIALTPPKFR
                     DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE
                     LAIRGPEKIQPRVDWQGLQIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
                     FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
                     FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT
                     IARRMNEEVEIFVGPRPEQYTWILKLLKTRRPGEIQPYKRKDLYPIK"
     gene            complement(7084..>8724)
                     /locus_tag="JNZ89_003705"
     CDS             complement(7084..>8724)
                     /locus_tag="JNZ89_003705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY8937437.1"
                     /translation="IDGLPHVDFSRVDKFFTYADAFRESLPIISGELYFEAHQGCFTS
                     ESATKAHNRNMENKLHDAEFFTTITNNMTSILRSEFDEIWKEMLTLQFHDILPGSCIS
                     RVYLETEKEYIKLEAKTEKIISDTQSTLLSKIDTSSYKDPHILFNTTCFARNEWININ
                     NNWLKARVNSYGYAVIDPKNKIVNGLKAESRSIENNYIKLLFSENGDLISLYDKRYGK
                     EYITENMHSEIRAYHEDAGFFAAWDFASNYRDGESYVLLAEKMTTVISGPKTTMTLIY
                     HYNSSYLRFAFTLTQDSPLVDVQTFIDWHEPNVSLKVKFPVSVQTSLAQCQIQFGVID
                     RPTHSDDSFAFAKDEIPAHHWVDLSDRETGIALIAKNKYGYRVKDQTLKLTLLRSQHK
                     PGEVVKTDNYDNFLINNFADIGKQKFIFSLFPHHGDYRVGGVINQAYIMNHPLQVVPV
                     KPHPGELPPSLSFFAIDTNSVIIETIKLAEDGDGIIVRLYESHGLEISAMLSWVCNYH
                     YVQYVDLQENKLDDSFYCNQYCNLEFKPFEIITLRLTQ"
BASE COUNT         2378 a         2012 c         2127 g         2207 t
ORIGIN      
        1 agcacctata catgtaaaga cgatatctcc aatttcatat tcagcagggt aattaatatt
       61 cacgttgtca ttccattgaa atagatacga atatacgtaa tagcataaaa aaattatttt
      121 ttcaggaggt gcaatgtata tttttattac gcatttcttc actgaatacg taatatttaa
      181 atatttgctt ccaatataac ctgtagaata aatcatactg cgccattttt cagttcatcg
      241 agacacctcg caagttttct tcatccttcg ctggatatct atccagcatt tttttatcat
      301 acagcattat ctttgattca ttacgcagga gcgtcatgtg ataggcagac tcagaggcat
      361 catcattgaa aaacaacccc cgctggtgtt aattgaagtg ggcggcgtag gctatgaagt
      421 gcatatgccg atgacctgtt tttatgaact ccctgaagcg ggtcaggaag cgatcgtttt
      481 cacccacttt gtggtgcgtg aagacgcgca actgctgtac ggttttaaca ataaacaaga
      541 gcgcacattg ttcaaagagt tgatcaaaac caacggcgtc ggcccgaagt tggcgctggc
      601 gatcctctcc ggaatgtcag cgcagcagtt cgttaatgcc gttgaacgtg aagaagtggg
      661 ggcactggtg aaactgccgg gtattggcaa aaaaaccgcc gaacgcttga ttgttgaaat
      721 gaaagaccga tttaaaggtt tgcatggcga tctgtttacc cctgccgccg acctggtact
      781 cacatcacct gccagcccgg cgaccgacga tgctgaacag gaagcggttg ccgcgctggt
      841 ggcgctgggc tataaaccac aagaagcaag ccgcatggtg agcaaaatcg ctcgccctga
      901 cgccagcagt gaaacattaa ttcgcgaagc cctacgcgcc gcgttatgag gtaaaggatg
      961 attgaagcag accgtctgat ttctgccggt accactttgc cggaagatgt agcagatcgc
     1021 gccattcgcc ctaaattact ggaagagtat gttggtcagc cgcaggttcg ttcacagatg
     1081 gagattttca tcaaagcagc gaaactgcgc ggcgatgccc tcgatcattt gttgattttt
     1141 ggtcctccgg ggttgggtaa aactacgctt gccaacattg tcgccaatga aatgggcgtt
     1201 aatttacgca cgacttctgg tccggtgctg gaaaaggcgg gcgatctggc agcgatgctc
     1261 actaaccttg aaccgcatga cgtgctgttt attgatgaga tccaccgttt atcgccagtt
     1321 gttgaagaag tgctgtaccc ggcaatggaa gactaccaac tggatatcat gattggtgaa
     1381 ggtccggcgg cacgctccat taaaattgat ttgccgccgt ttaccctgat tggcgcaacc
     1441 acgcgcgcag gttcgctgac atcaccgttg cgcgaccgtt ttggtattgt gcaacgtctg
     1501 gagttttatc aggtgccgga tctgcaatat atcgttagtc gcagtgcacg ctttatgggg
     1561 cttgagatga gtgatgacgg cgcgctggaa gttgctcgtc gcgctcgcgg tacgccacgt
     1621 attgccaacc gtctgctgcg tcgagtgcgt gatttcgccg aagtgaagca cgatggcacc
     1681 atctcggcag atatcgctgc tcaggcgctg gacatgttga atgtcgatgc tgaaggtttc
     1741 gattatatgg accgcaaatt gttgctggcg gtaatcgata agttctttgg tgggccggta
     1801 ggtctggata acctggcggc ggctattggc gaagaacgtg aaaccattga ggatgtgctg
     1861 gaaccttatt tgattcagca aggctttttg cagcgtacac cgcgtgggcg tatggcgacg
     1921 acgcgggcgt ggaatcactt tggcataacg ccgccagaaa tgccgtaagt cggattggtc
     1981 gctcgcgccg catccgacaa atgtgttcag cgatagatta gctggcctgc tttttcatca
     2041 tactgataat aaataacagt gctgcacata gcaccaccga cggacccgcc ggcgtatcgt
     2101 aaaatgcgga aaaggttaaa ccgcccgtta cggcaaccat ccccaccaac acagcgacac
     2161 ctgccatctg ttccggcgtg cgggcaaagc gacgtgcagt agcagcagga ataatcagca
     2221 gtgaagtaat aatcaacgcg ccaacaaatt tcatcgctac accaatcgtc aatgccgtca
     2281 ccagcatcaa caacaatttc acgcgctgta atttcacacc atcaacaaac gccagatccg
     2341 ggctaatcgt catcgacagc aaattgcgcc attgccagaa caaaatagcc accacgatga
     2401 ccacgccaat cgcaatagcg atgagatctt ctggcgtcac tgccagcaaa tcaccgaaca
     2461 ggtaagccat caaatcaaca cgaatgttag acatcagact aacgaccacc aggcccagcg
     2521 acagggcact gtgcgccata atccctaata acgtgtcaag cgccagctgt ggacgtttct
     2581 ccagccatac cagaccgccc gccaggagca gcgtaacggc aattaccgca tagaatggat
     2641 tcacgtccag caacaaacca aacgcgacgc caagtaatga ggcatgagcc agcgtatcac
     2701 cgaaataaga catacgacgc cagactacaa acgaacccag cggacccgcg gcacaggcga
     2761 gcatgatccc ggctaaccaa ccgggaaata ataattcaat catgagcgat catttccccg
     2821 acgcaaaaca attcgtccct gtaaatcgtg acgatgatta tgatgatggc gatagatacc
     2881 cagttgttca gcaccacgag gaccaaacat agaaataaac tccggatgta gggaaacaac
     2941 ttccggtgtg ccggaacaac aaatgtggtg attcagacac agcacttcat cggtttttgc
     3001 cattaccaga tgcagatcgt gagagaccat taaaacgcca caatccagtt cgcgacgcaa
     3061 ctggtcaata aggtcatata acgccacctg gccatttaca tccacgcctt gagtgggttc
     3121 atccagcact aataattgcg gtcgatttaa caatgctcgc gctaacagta cacgctgtgt
     3181 ttcgccacca gagagctttt gcatcggtgc gttaatcaga tgcccggcct ggacacgttt
     3241 cagtgcaggc aaaatatctt ctttatgtgt gccagggcgt aagcgtaaaa aacggtttac
     3301 ggtcagtggc aacgtggtgt cgagatacag cttctgcggt acatagccga tgcgtagttt
     3361 tccgttgcgc ttgataaccc cttcatcggg tgttaccagc ccgagcacta cccgtaccag
     3421 tgtcgactta cctgcgccat ttggcccaag taaagtcaaa atttttccag gtttaagttc
     3481 cagcgacaca tcagagagga cgcggcgttg gccaaaagaa accgagacat tttccaggga
     3541 aaccagactt gtcatgttaa ttttagtctt gcagtagtca tgagatgtta taatatcaca
     3601 cttctcatat tcattacgat gattggtcgc attatgttac ataaaaaaac gcttcttttc
     3661 gcagcattat ccgccgctct ctggggaggt gcaacacagg ccgcagatgc cgccgttgtc
     3721 gcttcgctta aacccgttgg gttcatcgct tctgccattg ctgatggtgt aacagaaacg
     3781 gaggttttac tgcctgacgg cgcttcagaa catgattatt cactgcgtcc atcggatgta
     3841 aaacgcttac agaacgcgga cttagtcgtt tgggttggcc cggagatgga agcgtttatg
     3901 caaaaaccgg taagcaaatt actaggagcg aagcaggtaa cgattgcgca gcttgaagat
     3961 gtgaaactgc tactgatgaa aagtattcac ggcgatgatg atgatcacga ccacgcggaa
     4021 aaaagtgaag aagatcacca tcacggcgat ttcaacatgc atctttggct ttccccagag
     4081 atagcgcggg ctacagcggt tgcaatccat ggaaaattag tggaacttat gccgcaaagt
     4141 cgagccaaac ttgacgccaa cctgaaggat tttgaggcac aattagcctc aaccgaaacg
     4201 caggttggta acgagctcgc gccgctcaag gggaaaggtt atttcgtttt tcacgatgct
     4261 tacggctatt tcgaaaaaca gttcggactg acaccgcttg gtcattttac cgttaaccct
     4321 gagattcaac ctggcgcgca gcgtttacat gaaataagaa cacagttggt tgagcaaaaa
     4381 gcaacctgcg tttttgctga gccacagttc aggccagcgg tcgttgagag cgtcgcacga
     4441 gggacatccg ttcgtatggg aacgttggat cccttgggga cgaatatcaa actgggtaaa
     4501 acaagctatt cagaattcct gagtcaatta gccaaccagt atgcgagctg cctgaaagga
     4561 gattaatgag gaagtgatta cgtgcaacag atagcccgct ctgtcgccct ggcgtttaat
     4621 aatttaccgc gaccacaccg cgttatgttg gggtcgctca ccgttcttac tctggccgtc
     4681 gctgtctggc ggccctatgt ttatcaccgc gatgccacgc caattgtcaa aaccattgag
     4741 ctggaacaga acgaaattcg ttcgctctta cctgaagcca gtgagccgat tgatcaagct
     4801 gcacaagaag atgaagccat tccccaggac gaactggatg acaaaatcgc cggtgaagcg
     4861 ggcgtgcatg aatatgttgt ttccactggc gatacgctaa gcagcattct caatcagtat
     4921 ggtattgata tgggtgatat cacccaactg gctgcggccg acaaagaatt gcgtaacctg
     4981 aaaatcggtc aacaactctc ctggacatta accgcggacg gcgaactgca gcgcctcacc
     5041 tgggaagtgt ctcgtcgtga aacccgaacc tatgaccgta ctgccgctaa cggttttaaa
     5101 atgaccagcg aaatgcagca aggagagtgg gttaacaatc tgctgaaagg taccgtcgga
     5161 gggagctttg ttgccagcgc cagaaacgcc ggtttaacca gcgccgaagt gagcgcagtg
     5221 attaaagcca tgcagtggca aatggatttc cgcaaactga aaaaaggcga tgaatttgcg
     5281 gtgttaatgt ctcgagagat gcttgatggt aaacgtgagc aaagccagct gctgggcgta
     5341 cgtttgcgtt cagaaggtaa agattattac gcaatccgcg ctgaggatgg caaattctac
     5401 gaccgtaacg gtactggtct ggcgaaagga ttcttgcgat tcccaacggc gaaacagttc
     5461 cgtatctcgt ctaactttaa cccgcgtcgt actaatccgg tgaccggtcg cgttgcacca
     5521 cacagaggtg ttgatttcgc catgccgcag ggtacgccag tgctttcagt gggtgacggt
     5581 gaagtggtgg ttgccaaacg cagtggcgca gcaggttatt atgtggctat tcgtcatggt
     5641 cgcagctaca ccacgcgtta tatgcacttg cgcaagattc tggtgaaacc gggacagaag
     5701 gtgaaacgtg gcgaccgtat cgcgctttcc ggtaataccg gacgttcaac cgggccgcat
     5761 ctgcactatg aagtatggat aaaccagcag gccgtaaacc cgctgacggc aaaactgccg
     5821 cgtaccgaag ggctgaccgg ctccgatcgt cgcgaattcc tggcgcaggc caaagagatt
     5881 gtgccgcagc tacggtttga ttaattaaca tccattcgca gccggtacgc agtcagtacc
     5941 ggcttttttt atttggtgcg gggcaagttg cgccgctaca ctatcaccag attgattttt
     6001 gccttatccg aaactggaaa agcatggaaa cgaaaaaaaa taatagcgaa tacattcctg
     6061 agtttgataa atcctttcgc cacccgcgct actggggagc atggctgggc gtagcagcga
     6121 tggtgggtat cgctttaacg ccgccaaagt tccgtgatcc cattctggca cggctgggac
     6181 gttttgccgg acgactggga aaaagctcac gccgtcgtgc gttaatcaat ctgtcgctct
     6241 gctttccaga acgtagtgaa gctgaacgcg aagcgattgt tgatgagatg tttgccaccg
     6301 cgccgcaagc gatggcaatg atggctgagt tggcaatacg cggaccggag aaaattcagc
     6361 cgcgcgttga ctggcaaggg ctgcagatca tcgaagagat gaggcgtaat aacgagaaag
     6421 ttatctttct ggtgccgcac ggttgggccg tcgatattcc tgccatgctg atggcctcgc
     6481 aagggcagaa aatggcagcg atgttccata atcagggcaa cccggttttt gattatgtct
     6541 ggaacacggt gcgtcgtcgc tttggcggtc gtctgcatgc gagaaatgac ggtattaaac
     6601 cattcatcca gtcggtacgt caggggtact ggggatatta tttacccgat caggatcatg
     6661 gcccagagca cagcgaattt gtggatttct ttgccaccta taaagcgacg ttgcccgcga
     6721 ttggtcgttt gatgaaagtg tgccgtgcgc gcgttgtacc gctgtttccg atttatgatg
     6781 gcaagacgca tcgtctgacg attcaggtgc gcccaccgat ggatgatctg ttagaggcgg
     6841 atgatcatac gattgcgcgg cggatgaatg aagaagtcga gatttttgtt ggtccgcgac
     6901 cagaacaata cacctggata ctaaaattgc tgaaaactcg cagaccgggc gaaatccaac
     6961 cgtataagcg taaagatctt tatcctatca aataaaaaaa agcctctcaa attattgaga
     7021 ggctgtactc gataaaaaat ctcaatgagt gttcccacta ttttgagttt ttaggttagt
     7081 acgctattga gttaatcgta gcgtgataat ttcaaaaggt ttgaactcaa gattgcaata
     7141 ttgattgcaa taaaaactgt catctaactt attttcttga agatcgacat attgaacgta
     7201 gtgataatta catacccacg aaagcatggc tgaaatttct aatccatgac tctcatataa
     7261 tcttacgatt ataccgtcgc cgtcttcagc taattttatt gtttcgatga taacgctgtt
     7321 agtatcgata gcaaaaaatg atagtgaagg gggtaattca cccgggtgcg gtttgacagg
     7381 gacgacctgt aagggatgat tcattatata ggcttgatta ataacaccac ccacacggta
     7441 atctccatga tgaggaaata aggagaatat gaatttttgt ttaccaatat ctgcaaaatt
     7501 attaatcagg aaattatcat aattgtctgt cttaacaact tccccaggtt tatgctgcga
     7561 acgcagcaaa gttaatttaa gcgtctggtc tttgacacga tagccatatt tgttttttgc
     7621 tattaaagct atgccagttt ctcgatcaga aaggtcgacc cagtgatgtg ctggtatttc
     7681 atctttggca aaagcgaacg aatcatcgct atgcgttggt ctgtcaatta caccgaactg
     7741 aatttgacat tgtgcaagag atgtttgtac tgacaccggg aatttgactt tgagagaaac
     7801 attaggttcg tgccaatcaa taaaagtttg gacatcaacg agtggactgt cctgtgtcag
     7861 ggtaaatgcg aagcgaagat aagaggaatt gtagtgataa atcagcgtca tcgtagtttt
     7921 aggcccgctg attacagttg tcattttttc agcgagtaaa acatatgatt ccccatcacg
     7981 ataatttgaa gcaaaatccc aggccgcgaa aaaacctgca tcttcgtggt atgcacggat
     8041 ctcactgtgc atattttcag taatgtattc tttaccatat cttttatcat atagcgaaat
     8101 taaatcaccg ttttctgaaa aaagaagttt aatgtaatta ttttcaatac ttcgagattc
     8161 tgccttcaga ccatttacga tcttattctt tggatcaatc acagcataac cataagagtt
     8221 tactcgtgct ttgagccagt tgttgtttat attgatccat tcgttacgag caaaacaggt
     8281 ggtattaaat aaaatgtgcg gatctttata agaagaagta tcaattttac ttaataaagt
     8341 agactgcgta tcagaaataa ttttctcggt ttttgcttct agtttaatat attccttttc
     8401 agtttcaaga taaactcttg aaatacatga tccgggaagg atgtcatgga attgcaaggt
     8461 cagcatctct ttccatattt catcaaactc actgcgaaga attgatgtca tattattagt
     8521 aatagttgta aaaaattcag catcatgtaa tttattttcc atatttcgat tatgagcttt
     8581 agttgctgac tctgatgtaa agcacccttg atgagcctcg aaataaagtt cacctgaaat
     8641 aatgggcaag ctttcgcgaa aagcgtcggc gtaagtgaag aacttatcaa cacggctgaa
     8701 atcaacatga ggtaagccat caat
//
LOCUS       DADMIB010000175         8623 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.177, whole genome shotgun sequence.
ACCESSION   DADMIB010000175 DADMIB010000000
VERSION     DADMIB010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8623
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.177"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..190
                     /locus_tag="JNZ89_003706"
     CDS             <1..190
                     /locus_tag="JNZ89_003706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937438.1"
                     /translation="DMLNPTKDTNWNSTCIYKSRHKMLPVNLTQETLFNSKSQDKHAL
                     FPIFTASWRAYRIMNKGA"
     gene            413..910
                     /gene="ubiC"
                     /locus_tag="JNZ89_003707"
     CDS             413..910
                     /gene="ubiC"
                     /locus_tag="JNZ89_003707"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709881.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HAY8937439.1"
                     /translation="MSHPALTQLRALRYFKEIPALDPQLLDWLLLEDSMTKRFEQQGK
                     TVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSG
                     PELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLP
                     ASPLY"
     gene            923..1795
                     /gene="ubiA"
                     /locus_tag="JNZ89_003708"
     CDS             923..1795
                     /gene="ubiA"
                     /locus_tag="JNZ89_003708"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HAY8937440.1"
                     /translation="MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVP
                     QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVV
                     LVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
                     VSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIL
                     QIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVG
                     LVLFLGLAMSYWHF"
     gene            complement(1950..4373)
                     /gene="plsB"
                     /locus_tag="JNZ89_003709"
     CDS             complement(1950..4373)
                     /gene="plsB"
                     /locus_tag="JNZ89_003709"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HAY8937441.1"
                     /translation="MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYV
                     LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESI
                     KLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG
                     RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
                     KLLASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
                     RLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
                     LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
                     RLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLP
                     QMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNI
                     AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDST
                     VPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMA
                     AIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQ
                     DDELHINPSHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLS
                     VLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLT
                     IESATQGEG"
     gene            4544..4912
                     /locus_tag="JNZ89_003710"
     CDS             4544..4912
                     /locus_tag="JNZ89_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HAY8937442.1"
                     /translation="MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVV
                     IACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
                     LIAIIVAVITWCILLWSHFG"
     gene            5022..5630
                     /gene="lexA"
                     /locus_tag="JNZ89_003711"
     CDS             5022..5630
                     /gene="lexA"
                     /locus_tag="JNZ89_003711"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HAY8937443.1"
                     /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
                     EHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDP
                     SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKK
                     QGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL"
     gene            5649..7028
                     /gene="dinF"
                     /locus_tag="JNZ89_003712"
     CDS             5649..7028
                     /gene="dinF"
                     /locus_tag="JNZ89_003712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709876.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter DinF"
                     /protein_id="HAY8937444.1"
                     /translation="MPPGVAVCFSSLFIRLVCMAFLTSSDKALWHLALPMIFSNITVP
                     LLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQA
                     LARALVQPLLLALGAGALIALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPAS
                     LANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYA
                     TLLIGLLMVRKILKLRGISGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVL
                     GARLGSDIIAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACR
                     QSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLADRYLIWQVILPLVGVWCYLLDGMF
                     IGATRAAEMRNSMAVAAAGFALTLLTLPWLGNHALWLALTVFLALRGLSLAAIWRRHW
                     RNGTWFAAT"
     gene            7144..7353
                     /locus_tag="JNZ89_003713"
     CDS             7144..7353
                     /locus_tag="JNZ89_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HAY8937445.1"
                     /translation="MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQ
                     ERYGYQKDQAEKEVVDWETRNEYRW"
     gene            complement(7395..7910)
                     /gene="zur"
                     /locus_tag="JNZ89_003714"
     CDS             complement(7395..7910)
                     /gene="zur"
                     /locus_tag="JNZ89_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc uptake transcriptional repressor Zur"
                     /protein_id="HAY8937446.1"
                     /translation="MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISA
                     YDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQSTHTSAMFI
                     CDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQH
                     DHSVQVKKKPR"
     gene            8228..8482
                     /locus_tag="JNZ89_003715"
     CDS             8228..8482
                     /locus_tag="JNZ89_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937447.1"
                     /translation="MLKIIPGATGYFNKTLNSNQFDNEDAIKDKLDNRGSIKGKLNNI
                     YGKSIDYAALRHRDIIIAKIDLFIQRITHNLWHARKKMCF"
     gene            8506..>8623
                     /locus_tag="JNZ89_003716"
     CDS             8506..>8623
                     /locus_tag="JNZ89_003716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HAY8937448.1"
                     /translation="MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICN"
BASE COUNT         2033 a         2047 c         2310 g         2233 t
ORIGIN      
        1 tgatatgttg aatcctacaa aagataccaa ttggaattct acgtgtatct ataaatccag
       61 acataagatg ttgcctgtta atcttactca ggaaacactt ttcaactcca aatctcagga
      121 taaacatgcg cttttcccca tttttactgc gagttggcga gcttatcgta taatgaataa
      181 gggtgcttaa gtaaaggaaa acatcaccgt tcctggcatc ctgggcggtg atgcccctat
      241 ggttgccctc gccagcgcgg gcatcggcaa agcgtaaggt tcaaaagcga tttaccactt
      301 catgcgattg ttgcgttttt gttgcgcatt agatcactta atttgcttta catctcccgt
      361 aaacactttt ctgcgataca atgcctttac gttatgtaac ggagagttcg gcatgtcaca
      421 ccccgcgtta acgcaactgc gtgcgctgcg ctattttaaa gagatccctg ccctggatcc
      481 gcaactgctc gactggctgt tgctggagga ttccatgaca aaacgttttg aacagcaggg
      541 aaaaacggta agcgtgacga tgatccgcga agggtttgtc gagcagaatg aaatccccga
      601 agaactgccg ctgctgccga aagagtctcg ttactggtta cgtgaaattt tgttatgtgc
      661 cgatggtgaa ccgtggcttg ccggtcgtac cgtcgttcct gtgtcaacgt taagcgggcc
      721 ggagctggcg ttacaaaaat tgggtaaaac gccgttagga cgctatctgt tcacatcatc
      781 gacattaacc cgggacttta ttgagatagg ccgtgatgcc gggctgtggg ggcgacgttc
      841 ccgcctgcga ttaagcggta aaccgctgtt gttaacagaa ctgtttttac cggcgtcacc
      901 gttgtactaa gaggaaaaaa atatggagtg gagtctgacg cagaataagc tgctggcgtt
      961 tcatcgctta atgcgtacgg ataagccaat tggcgcgtta ctgctgctct ggccaacatt
     1021 atgggcgttg tgggtggcga caccgggcgt tcctcagctc tggatcctgg cggtatttgt
     1081 cgcgggtgtc tggctgatgc gcgctgccgg atgtgtggtg aatgattatg ctgaccgaaa
     1141 gtttgatggt catgttaagc gcacggcgaa ccgaccactt cccagcggcg cggtaacaga
     1201 gaaagaggcg cgcgcgctgt ttgtagtgct ggtactgatt tcgtttttac tggtactgac
     1261 gctgaatacg atgaccattc tgttgtcgat tgccgctctg gcgttggcgt gggtgtaccc
     1321 gtttatgaag cggtataccc atctcccgca agtggtgctg ggcgcggcgt ttggctggtc
     1381 gattccaatg gcttttgccg ctgtgagtga gtcggtgcca ttgagttgct ggttaatgtt
     1441 cctcgccaat attctctggg cggtggctta cgacacgcag tatgcgatgg ttgaccgcga
     1501 tgatgatgtg aagattggca ttaaatccac ggcaatcctg ttcggccaat acgataaatt
     1561 gattattggt attttgcaga ttggcgtact ggcactgatg gcgatcatcg gtgagttaaa
     1621 tggcttaggc tggggatatt actggtcaat tctggtggct ggcgcgctgt ttgtttatca
     1681 acaaaaactg attgccaacc gcgagcgtga agcctgcttt aaagcattta tgaataataa
     1741 ctatgttggt ctggtactat ttttagggct ggcaatgagt tactggcatt tctgatgatg
     1801 taaaaaagcc ggatgatcat ccggctttct tctgggttgc ctgatgcgcg gcgcttctca
     1861 ggcctacaca acacatcgca atttattgaa tttgcagatt atggaatgcc ggataaggcg
     1921 ttttcgccgc atccggcaat tctctctggt tacccttcgc cctgcgtcgc actctcaatc
     1981 gtcaaacgca cgtctgatgt aatcaactcc gccagcaact gataaacctt catcgtttct
     2041 gccggttcgg catcgccgct atcgctgata tacccttcat cacgcagcgt cagcaccaga
     2101 gaactgaaca ccgccttgtc gaagaactcc ggcgcgttga taccgtgcag cacggagaga
     2161 cgttgcgcga cggtgcggct ctctttctcc agcgtaccgc ggttgatcga cgggttagcg
     2221 ctcaacagcc agaaggtgat ggcataacgt tgcagcgttt cgcgcgcgcc tgcggccagc
     2281 agctgtagcg tgcgagaatg cgacgggttg atatgcaact catcatcttg cagggtaatc
     2341 agcccctgac gttgcatctc atttgccaac gcatcaataa cgtccggcaa ctcgtcgcga
     2401 tcccagcgca ggaacagctc cgctttcagc attgggtaaa gcacattgac gtgctccatc
     2461 aatacgtcgc gggagatgtg gcgatgctgg gtgacaattg ccgccatcag cgaaggcagc
     2521 accaacatat gcgcaatgtt gttgcgatag taggtcatca gcaccgcttg ctcgcgcggc
     2581 agaatgatga tgtcgccgat agtgtctttc tcaacttcaa acttgttcat ttgcagcgcg
     2641 tgatcgataa gctcgctggc gctggctgaa ggaacggtag agtccgtgga gtaaggtacg
     2701 ttgcgcatca gatccaggta gcagttgagt tgctcggtta actgctcgcg ggtaagtgag
     2761 cgctgacgtg atgccagtag cgcggtacag cagaggttca tggcgtttgc cgcgcctgcg
     2821 ttgttaatgc gtaccatcag atcggcagca atattattga ccgtcggcgt taaccatgcc
     2881 ggacgcaccg cttcgatggg atcgatagat tcacgccagt caggtacatg ctggttaagg
     2941 taggtcatca acggcattgg ttcaccgaag ttgacgtaac cctgaccgag attacgcagc
     3001 ttgcttaaac cgcgcagcat ctgcggcagg ctctctttct ctttcgtcgc accgcgcagt
     3061 tctttggcgt aagtacccac ttccatgacg tgctcataac cgatatagat cggaatcagc
     3121 gtaatcggac gcgtgccgcc acgcagcatc gcctgaatgg tcatcgacag cgtaccggtt
     3181 ttcggatcca gcaaacgccc cgtacgggaa cgaccgcctt ccacgaaata ctcgacggaa
     3241 taaccacggc tgaacagttc gccgagatac tcacggaaaa cggtggaata aagtttattg
     3301 cctttaaacg tacggcgaat aaagaacgcc cccagacggc ggaaaatcgg cccggccggc
     3361 cagaaattca ggttgatccc ggcggcgata tgcggcggca ccagcccctg gtggtacagc
     3421 acgtaagaaa gtagcaggta gtccatgtga ctgcggtggc aaggcacata caccagctca
     3481 tgaccgtcgt gggccagctg gcgaacgcgc tcggcgttat ggacgttgat gccctgataa
     3541 agtcggttcc aggtgaagcc cagaatgcgg tcagtcaggc ggatcatctc gtaagagaaa
     3601 ttcgccgcaa tctcttccat cagcgcaatc gcgttctgct gcgctttttc atgggagatt
     3661 tttttgctgc gcgcttcatc ttctaccgct ttggcaatgg cgcgggaggc gagcagctta
     3721 ttaaacagat cctgacgagc aggcagacgt gggcccacag cagccagacg ttgacgggca
     3781 aagtgcatac gcgccacgcg cgccagtttc tgtgcgatag ttttatccgt gccgtgttca
     3841 tccgccatac ggcgcagcga aactgacggc gagaaacgca caaaactgtc gcgaccgagc
     3901 cacagtacgg cgaaaaattt ctgtacgccg ttaagcatac gcagcggcgg gtttacttcg
     3961 cctttttcac gccccggcgc gcgaccaaac atcaccgata ctggcaccat ctgcacatcc
     4021 agatttgggt tgctacggtg caaatcgaga tagtcgtgga acagcttaat agactcttct
     4081 ttcggcgtgt aataggtgaa tacacgcggc ccgccgtgaa tgaacacata gcgcggcagt
     4141 agcgtgccgt cgatttccag cggctctaac gggtcaggca agtcatgagc cagacactgg
     4201 gcgcgtaacg tcagcaaatc tgctttcgag ttgtacggta aaacgtacat aattggacga
     4261 gaggtatcca gccccagttc cggggcagga tctgccggaa tagacttgct ttttaccagg
     4321 atgcttaatg gtaaattcag taatttgtag taaattcgtg gccagccgga cataaacgat
     4381 gtaaagcctc tggttaataa tgcaaatgcg cggcaaggat agcagaaagt catgggaaat
     4441 tctgtggtat ccgctcatgt ttcgcgcggc gttacgcaaa cccgaatcat cggatttaac
     4501 ggtacactga tattgacgct cataatgtaa aaaggttctt tcaatggcca ataataccac
     4561 tggattcacc cgaattatca aagctgctgg ctattcctgg aaaggtttac gcgctgcatg
     4621 gatcaacgaa gcggcattcc gtcaggaagg cgtagcggta ttgttggcgg tggtcatcgc
     4681 ctgctggctg gatgtggacg caattacccg cgtgctgctt atcagctccg tgatgctggt
     4741 gatgattgtg gaaatcctca atagcgccat cgaagcagtg gttgaccgaa ttggctctga
     4801 ataccatgag ctttccggac gcgcaaaaga tatgggatcc gccgcggtgc tgattgcgat
     4861 tatcgtcgcc gtgataacct ggtgcatcct gttatggtcg cattttggat aacccttcca
     4921 gaattcgata aatctctggt ttattgtgca gtttatggtt ccaaaatcgc cttttgctgt
     4981 atatactcac agtataactg tatatacacc cagggggcgg aatgaaagcg ttaacggcca
     5041 ggcaacaaga ggtgtttgat ctcatccgtg atcacatcag ccagacaggt atgccgccga
     5101 cgcgtgcgga aatcgcgcag cgtttggggt tccgttcccc aaacgcggct gaagaacatc
     5161 tgaaggcgct ggcacgcaaa ggagttattg aaattgtttc cggcgcatca cgcgggattc
     5221 gtctgttgca ggaagaggaa gaagggttgc cgctggtagg tcgtgtggct gccggtgaac
     5281 cgcttctggc gcagcagcat attgaaggtc attatcaggt cgatccttcc ttattcaagc
     5341 cgaatgctga tttcctgctg cgcgtcagcg ggatgtcgat gaaagatatt ggcattatgg
     5401 atggcgactt gctggcagtg cataaaactc aggatgtacg taacggtcag gtcgttgtcg
     5461 cacgtattga tgacgaagtt accgttaagc gcctgaaaaa acagggcaat aaagtcgaac
     5521 tgttgccaga aaatagcgag tttaaaccaa ttgtcgttga ccttcgtcag cagagcttca
     5581 ccattgaagg gctggcggtt ggagttattc gcaacggcga ctggctgtaa catatctctg
     5641 agaccgcgat gccgccaggc gtcgcggttt gtttttcatc tctcttcatc aggcttgtct
     5701 gcatggcatt cctcacttca tctgataaag cactctggca tctcgcctta cccatgattt
     5761 tctccaatat caccgttccg ttgctgggac tggtcgatac ggcggtaatt ggtcatcttg
     5821 atagtccagt ttatttgggc ggcgtggcgg ttggtgcaac ggcgaccagc tttctcttta
     5881 tgctgttgct gtttttacgc atgagcacca ccgggctgac tgcgcaggct tatggtgcca
     5941 aaaatcctca ggcattagcc cgtgcgctgg tgcaaccgtt gctgttggcg ttgggggcag
     6001 gggcgttaat tgcgctgctg cgtacaccga ttatcgatct ggcactgcat attgttggcg
     6061 gtagtgaagc agtcctggaa caggcgcggc gctttcttga aatccgctgg ttaagcgcac
     6121 cggcgtcact ggcgaatctg gtattacttg gttggttact cggcgtgcaa tatgcccgtg
     6181 cgccagtaat tttgttagtg gtcggcaata tcctcaacat tgtgctggat gtctggctgg
     6241 tgatggggct gcatatgaac gtgcagggcg cggcgctggc gacggttatt gcggaatatg
     6301 caacattgct gattggtctg ctaatggtgc gtaaaatcct caaactacgc ggaatttccg
     6361 gcgaaatgct gaaaactgcc tggcgaggaa acttccgtcg cttgctggcg cttaaccgcg
     6421 atatcatgct gcgttcgctg ttgttgcaac tctgtttcgg cgcgatcacc gtacttggtg
     6481 cgcgactggg gagtgacatt atcgctgtta acgcggttct gatgacgcta ctcaccttta
     6541 ccgcctatgc gctggatggt tttgcctacg cggttgaagc gcattccggt caggcgtacg
     6601 gtgcgcgcga cggtagccag ttgctggatg tctggcgggc agcgtgccgc cagtcgggga
     6661 tcgtagcgtt actgttttcg gtagtttatt tgctggcagg ggaacacatc attgcgttgc
     6721 tgacgtcgtt aacccagatt cagcagctgg ccgaccgcta tcttatctgg caggtgattt
     6781 tgccgttggt tggcgtctgg tgttatctgc tggacggcat gtttataggc gcaacgcgcg
     6841 cagccgaaat gcgtaacagt atggcggtgg ccgccgcagg ttttgcgctg acgctcctta
     6901 cgctgccgtg gctgggtaat catgctttgt ggctggcgtt aaccgtcttt ctggcgttgc
     6961 gcgggctttc tctggcggct atctggcggc gtcactggcg caacggtacc tggtttgccg
     7021 caacgtgacg gttaaaaatt ctgaataaat aatcctaagc caaattgctg actacactta
     7081 atctcacgtt cagaagaaaa gtgaacgtac tctcattcac aacctaacga tgaggtcttg
     7141 attatgaata aagatgaagc cggcggtaac tggaaacagt ttaaaggtaa agtgaaagag
     7201 caatggggca aactgaccga tgatgatatg acgatcattg aaggtaaacg tgatcaactg
     7261 gtcggtaaaa tccaggaacg ttatggttat cagaaagatc aggcagaaaa agaggtcgtg
     7321 gattgggaaa cccgcaatga atatcgctgg taattaatcc ctcctgcccg acgtgtacaa
     7381 ggatgtacgc cctcttaacg cggtttcttt ttcacctgca cagagtgatc atgctggcac
     7441 tgttcaggat gacgacacgc ttccacttcc acgcatgccg cacagagccc atgtgcttca
     7501 atcacattat gccgcagggc aaaccccatt tttgccgcca gcgtatgcat gatgtcttcc
     7561 acgccttctg cacactcttc tttcactgcg ccgcagcgat cgcaaataaa catggctgaa
     7621 gtatgggtgg actggtcgaa cagatgacag agcacataac tgttggtgga ttccacctta
     7681 tgcacaaaac cttgctcaag cagaaaatcc agcgcgcgat aaaccgttgg cggcttggct
     7741 tgcggttcag cttcgcgcag taaatcaagc agatcataag cgctgatagc gccatcctgc
     7801 agactcatca ggcgcaacac ttccaggcgc tgtggggtca ggcgcacatt acgctgcgcg
     7861 cagatttttt cagcctgcgc taataactcc tgcgttgtgg tcttttccat cgggcacctc
     7921 aaagtggggg ttaagaatgt ccttacttta ccatgttcca ggaaaaacac cgagaaccct
     7981 tattgttgcc gtaatgttga ttttctgttt tgtaggtaag gtgttatgtt gccttgtcgt
     8041 accattatca acacgataat aattaataat tcatttttaa ataaattgct tcaagttaac
     8101 tcgctattta tttaactggg tttaaacgca tacctgtagt tcagaaatta tgagcgattt
     8161 ttgatagtga ccagatggca aaagaattat aaggaggaca cggtacgaca aaaaaggtag
     8221 atgaatcatg ttgaagataa tacccggtgc aactggatac tttaataaaa cactcaattc
     8281 aaatcaattc gataatgaag atgcaatcaa agataaatta gataatagag gttcaatcaa
     8341 aggtaaatta aataatatat atggtaaatc tattgattat gcagcgctgc gtcatcggga
     8401 tataattatt gcaaaaatag atttgtttat tcaacgaatc acgcataatt tatggcatgc
     8461 acgtaaaaaa atgtgttttt aattgagcaa ataaatgatc tcaaaatgtg ggtcaataag
     8521 tatattgacg attgcactga tgaggattta aacgatcgtg actttattgc atcagttgtt
     8581 gaccgggcta tttttcattt cgcgattaat agtatatgta atc
//
LOCUS       DADMIB010000176         8598 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.178, whole genome shotgun sequence.
ACCESSION   DADMIB010000176 DADMIB010000000
VERSION     DADMIB010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8598
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.178"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..183
                     /locus_tag="JNZ89_003717"
     CDS             <1..183
                     /locus_tag="JNZ89_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HAY8937449.1"
                     /translation="EAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQ
                     KGEVVGVDDQCKEHKE"
     gene            402..644
                     /locus_tag="JNZ89_003718"
     CDS             402..644
                     /locus_tag="JNZ89_003718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709694.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937450.1"
                     /translation="MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVD
                     QYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW"
     gene            complement(974..1903)
                     /gene="fdhE"
                     /locus_tag="JNZ89_003719"
     CDS             complement(974..1903)
                     /gene="fdhE"
                     /locus_tag="JNZ89_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HAY8937451.1"
                     /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLREL
                     AENNPLDDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKH
                     WQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFI
                     WAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLC
                     ETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAV
                     ADDLASLVLDARMEQEGYARSSINPFLFPGEGE"
     gene            complement(1900..2535)
                     /gene="fdoI"
                     /locus_tag="JNZ89_003720"
     CDS             complement(1900..2535)
                     /gene="fdoI"
                     /locus_tag="JNZ89_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HAY8937452.1"
                     /translation="MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLM
                     QIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVG
                     DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
                     IVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE"
     gene            complement(2532..3434)
                     /gene="fdxH"
                     /locus_tag="JNZ89_003721"
     CDS             complement(2532..3434)
                     /gene="fdxH"
                     /locus_tag="JNZ89_003721"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HAY8937453.1"
                     /translation="MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKA
                     CQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
                     CSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKC
                     TLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAG
                     VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHY
                     VGVGPNRADEEENNLHEEKDEERK"
     gene            complement(3447..6497)
                     /gene="fdnG"
                     /locus_tag="JNZ89_003722"
     CDS             complement(3447..6497)
                     /gene="fdnG"
                     /locus_tag="JNZ89_003722"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(5910..5912),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HAY8937454.1"
                     /translation="MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTR
                     ETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFI
                     HSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLS
                     TGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVANYYAPIR
                     SGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYD
                     KSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE
                     YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSM
                     MKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNK
                     NKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENG
                     SIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNY
                     AIPHEPKSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIF
                     AGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQL
                     LKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFET
                     PLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAI
                     LQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIG
                     IPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV"
     gene            6691..7524
                     /gene="fdhD"
                     /locus_tag="JNZ89_003723"
     CDS             6691..7524
                     /gene="fdhD"
                     /locus_tag="JNZ89_003723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HAY8937455.1"
                     /translation="MKKTQRKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVA
                     LVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSS
                     RRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDF
                     QPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSS
                     RASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLS
                     N"
     gene            7678..>8598
                     /locus_tag="JNZ89_003724"
     CDS             7678..>8598
                     /locus_tag="JNZ89_003724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HAY8937456.1"
                     /translation="MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAP
                     EAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYVDWLKDFK
                     QGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNT
                     INEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAEL
                     KNIEEREGKIFHYYSLAVMISAKQINNLISQEKFDVDAAMKKVSELETLVAQAKEADK
                     GGMNFSFINSAGQYQLEAKKYVRRIRDKVPY"
BASE COUNT         2049 a         2175 c         2273 g         2101 t
ORIGIN      
        1 gaggcaatta aacggctgaa caagcttcgg ggctggcgta aggtttcacg atctgcaatt
       61 ttacgcgaag cggttgagca atatctggag cggcagcaat ttccggtgcg taaagcaaag
      121 ggaggcaggc aaaaggggga ggtagttggt gttgatgatc agtgtaagga gcataaggaa
      181 tgaaaaaaat ttttcattct tgaatataaa aaaacagatg cccttattct ggtattaata
      241 caaggctgtt ttacttgaac ttataataac tgcaactgtt acatcgtatc tggaaaacgc
      301 ctcgcaaaaa taaaaaatga tgcgtaaatg agctttcttt aaagattcgg caagggtact
      361 tttctctcca tagattcaaa aatgatattg gcgagatatt tatgaactct ctggcaggta
      421 tagatatggg cagaatttta ctcgatttat cgaatgaggt gattaagcaa cttgatgatc
      481 tcgaggtgca gcgtaatctt cctcgtgcgg acctattaag ggaagcggta gatcaatacc
      541 tgataaatca atcgcaaaca gcaagaacca gtgttcctgg catctggcaa gggtgtgagg
      601 aagatggtgt cgaatatcag cgtaagctgc gcgaggaatg gtaatgggaa aaaatgatgt
      661 caatcagatt gctgacaacg tgcgcgttgt tcatgccgga tgcggcgtga acgccttatc
      721 cggcctacaa agtcatgcaa attcaatata ttgaagttta ttggtaggcc tgataagcgc
      781 agcgcatcag gcaatcatac gcttgtcatc agtgacatac ccataacctt atcgatgtgt
      841 tggagggaag aacgaggcaa acagacaatt gcggcatgat cttgaatggg taacgcggaa
      901 tacgagagat ggtgtcgtca caccctatga gctgtaatcc gggcgaccag cgccacccgg
      961 aaaacgtcag agattactcc ccttcacccg gaaacaggaa cgggttgatg gaactgcggg
     1021 catagccttc ttgctccatt cgcgcgtcca gtaccagaga agcgaggtca tctgccacgg
     1081 cttcaacttt cggttctttt tcctgataaa gaatcttcag gtaagtgccg cagtcatcgc
     1141 agctttcggc tttaatcgcg gcctgttcgt catccagcga ccagtaatgc agtttgccgc
     1201 tctgttcaca gttgctgcat tttacgcgca ctacgtgcca ttcggtttca cacaggttgc
     1261 agtgcaggta acgcagaccc tgagtggtgc caatttgcac catgctggac accggcatag
     1321 aaccacaaac cgggcaatat tgacgttgct cgccgtattc agcgcgggct ttgccgggga
     1381 tcagattggc catctgcgcc cagtagagcg acagtgcagc ccagataaac ggcgctttat
     1441 cgctgctgac ggatgagaaa tcagaggcaa acagtgcgct ggccatatct tccagctcct
     1501 gagtcgatgc cttctccaga ttctcaatca ctgccagcgc cgggccgctc atttcaggtt
     1561 tcagctcagc aatcagcgcc atcagcagct tttgccagtg cttatcacgc ggcagaacgt
     1621 gaatatccag cgggggcttg ccctgtgcgc tggcttcttt aatgcgcgcg gtcagatcca
     1681 tctccagcgg atggtcgtac agcaccactt cctgggcgtg ggcgataagc gcagcaaagc
     1741 gcaggtaatc atccagcgga ttattttctg ccagctcgcg cagacgctcg gcgcggcggt
     1801 tgtataaatt cttgagccga gggaacaata acggcggaat catatccgcc gtacgtttct
     1861 cgctcgaacc cagctcatct tgcgggatta tgcgaatact cattcagctt tcttttccgt
     1921 tgtcttgcgg acctcacggt accagcgcgg gtgatgtttc ttcgcccagg cgctggtaac
     1981 ccatccttcc accatggcgg taatcgtgcc tttcacccaa agggcggcgt agatatgcac
     2041 catgataacc acaattaacg ccactgcggc aaatgaatgc agcattaacg cgaatcggat
     2101 caccgggatt gagaaagcag gcgcaaaata aggacgccag ataatcacgc cgctcaccag
     2161 cagcagaacc aggaaaataa tcgccgccca gaaaacgcat ttctgaccga agttataacg
     2221 cccggtgtca cctacttcct cgttgacgac gatcttacga atattcttcg cccaaaagat
     2281 atcatcccga ttgattaggt tgtgatgcca gtaacggaaa aacatgatga tgaacgaggc
     2341 aaacataacc acgccgacaa acgggtgcag aattcgcgcc agctgcggtg tgcccatgat
     2401 ttgcatcaac cagttgaagg acgggaacaa aaagcccagc ccgctcaccg ccgctaggat
     2461 gaagcagaag gcggtgatcc agtggttgat acgttccggc gcggtgtagc gcacgatggt
     2521 gtcacgtcgt ttcatttgcg ctcctcgtct ttctcttcgt gcagattatt ctcttcctca
     2581 tccgcacggt tcggaccgac acccacgtag tggaagatac tggctgcgaa ggtagccgca
     2641 aagccaacag ctgcgagcgg tttccagatg cctttccaga atttcacggt ttcgctgatt
     2701 tccgggttct ccggcaagcc atgatacaga tttggcttgt cagcatggtg cagcacgtac
     2761 ataacgtgtg taccaccgac gcctgccgga tcgtacaggc ccgcattgtc gtaaccgcgg
     2821 gttttcagct ccgccacgcg ctcgctcgcc agcgttttca tcgactcttt cgtaccgaag
     2881 tgaatcgcgc ccgttgggca ggtcttcacg caggctggtt cttgcccaac caccacgcgg
     2941 tcaacgcaca gcgtacattt gtagacgcgg ttgtcttccg ggttgaggcg cggaatgtcg
     3001 aacggacagc ccgcaatgca ataaccgcag ccaatgcact gctcggactg gaagtcgacg
     3061 ataccgttgg catactgaat aattgcacct tccgccgggc acgctttcag acagcctgga
     3121 tcggaacagt gcatacagcc gtctttgcgg atcagccatt ccagtttgtc gttctgctcc
     3181 acttccgaga agcgcatcac cgtccacgat ttggcactta aatcattggg gttgtcgtac
     3241 accccaatgt tattgccgac ggtatcgcga atgtcgttcc actctgaaca cgccacctga
     3301 caggctttac agccgataca ggtggtgacg tcgatgagtt tcgccacttc ttcctggaag
     3361 tcccgcgcct gaggcgcggg ggtcagaccg ttagtcgcgg aacgacgaat gatatcttga
     3421 gattgataag ccatatgtcg tctccgttac accttttcca cattcacaag gaaggactta
     3481 aactccggcg tctgcgtgtt cgcatcacca acgaatggcg ttaaagtatt ggcaataaag
     3541 ccttttttag ctacgccttc atagccccag tgaatcggaa taccgatggt atcgatatct
     3601 ttgccgttcg ctttcagcgt gcgaatacgt ttggtcacca ccgctttggc tttgatatag
     3661 ccacggttgg aggagacttt cacggtatcg ccctgggcaa tgccaagttt attcgccagc
     3721 gactccccga tttccacaaa ctgctctggc tgcaaaattg cgttcaacag cgcgtgtttg
     3781 gtccagtagt ggaagtgctc ggtcagacga taggtggttc cgacatacgg gaacttatcg
     3841 gctttaccca atgcttcggc gtcgtcttta aagatacgtg cagccgggtt cgagataacg
     3901 tttggatgca gcgggttagt tcccagcggc gtttcaaacg gctcgtagtg ttccgggaac
     3961 ggaccttccg ccatcttatc gagggcaaac agacgcccca tgccttcctg ctgcatgata
     4021 aacggcccga cgccgctacc cggaggcgct gcgctgtagt ccggaatatc ccagccggtc
     4081 cacttagtgc cgtcccattt cagcaactga cgcttcggat cccacgggtt accctgcgga
     4141 tctgcggagg cgcggttata cagaatgcgg cggttaagcg gccatgccca tgcccagccc
     4201 agcgtgttac cgaggccaga cggatcggcg ttatcacgac gcgccatctg gttgccttcc
     4261 ggcgtccagc taccggcgaa aatccagcag ccacaggagg ttgtaccgtc atcgcgcaat
     4321 tgggcgaacg agctaagttg ttggcctttc ttgacgataa ccgcaccggt tgccggatcg
     4381 gtaatatcgg ccagcgcctt accgttgctc tccatcgcta cttcttccga cttcggctca
     4441 tgcggaatgg cgtagttcca ggtcatgttc agcacctgat ccgggttcgc gccaccctgt
     4501 tcggcataca tcttgcgcaa gcgcaggaag ataccggaga ggatctcacc gtcagtcagc
     4561 gcaatccccg gggcgtccgc acctttccag tgccactgca accagcgacc tgagttaacg
     4621 attgaaccgt tctcttctgc gaagcaggtc gatggcagac ggaacacttc ggtctggatc
     4681 ttcgacgagt caacttcgtt cagctcaccg tggttctgcc agaagttaga ggtttcagtg
     4741 ttcagcgggt cgatggtgac gaggaacttc agtttcgaca gacaaccgat cactttgttt
     4801 ttgttcggga atgaggcaac agggttaaaa ccctggcaga tatagccatt gaccttgccc
     4861 tctttcatca tctcgaagta ttgcaggacg tcgtagcctt tatcccactt cggcaaccag
     4921 tcaaagcccc agctattttc cgccgtcgct ttatcaccaa agaaggcctt catcatagag
     4981 acgaagaatt tcgggtagtt gccccagtag tttacctggc cttccagcag cggttttggc
     5041 gtgttggcgg taaggtaggt ttgcagatcg gtctgcttct cgcttggcag cgtcatgtaa
     5101 cctggcaggc tctgcgacag cagccccagg tccgtcagcc cctgaatatt ggagtgaccg
     5161 cgcagggcgt taacgccgcc gcctgccatc cccatattgc cgagcagcag ctggatcatc
     5221 gccatcgtac gaatgttttg cgcaccaacg gagtgttgcg tccagccgag ggcatacagg
     5281 aacgaggcag ttttatcgtg agcactggtt tctgcgatgt attcgcagac tttcaggaac
     5341 gcgtcttttg gcgtaccaca gatgttttca accacatctg gcgtgtagcg ggaaacgtgc
     5401 tgtttcagca agttccacac gcagcgcgga tgttgcagcg tggtatcgcg tttggcgaag
     5461 ccgttttcgt ccagttcgta agtccaggag gatttatcgt acttgcgttt ttccgcgtca
     5521 tagccggtga aaaggccatc ttcaaagccg taatcctcac gcacgatcag gctggcgttg
     5581 gtataggctt cggtgtattc gcggttgaat ttttcattgt tcagcaggta cagcaatacg
     5641 cctgacagga aagcaatgtc agtaccggaa cgaatagggg catagtagtt agctaccgcc
     5701 gccgtacgcg taaagcgagg atcgatcaca atcagcttcg cgccgttgtg aattttggct
     5761 tccatcgccc agcggaaccc gaccgggtga gcttcagcgg cgttaccgcc catcaccacg
     5821 acgaggttgg cgttcttgat gtcgacccag tggttggtca tcgcaccgcg accaaatgtt
     5881 ggagcaagac ttgctaccgt tggtccgtgt cagacacgcg cctggttgtc gaccgcgagc
     5941 atacccagcg cgcgggagaa tttttgcgtt aaatagccgg tttcgttact cgacgcggaa
     6001 gcacacagca tcccggtgga gagccagcgg ttaacagtca cgccttcggc gttttgcgca
     6061 atgtagttag catcgcggtc ttctttcatc agtttggcga tgcgatcaaa cgcctcttcc
     6121 caactgattt gctgccattt atcagaacct ggcgcacggt attccggaaa cttcagacgg
     6181 ctttcggagt ggatgaaatc caccaggcca gcgcctttcg gacaaagtgc accgcggttg
     6241 accgggtgat ccggatcgcc ttcgatatgg aagatagatg ctttggcgtt ttttgctccg
     6301 tcaccgaggc tgtacatcaa cagcccacag cctacggaac aataggtgca ggtattacgg
     6361 gtttcgcggg tgcgcagcag tttatactgc cgggtttccg cgagtgctac gctgggtgca
     6421 aaacctagtg ccgctgccgt ggtgcctgcc ataccgccag cgcagatctt aaagaactgc
     6481 cttctgctga cctgcatgga ttgctccttg tttcgacatt gtcacgtccc atttacattc
     6541 gcttgctgcg tgtgcaggga gtgggagtta tttttctttg cggaaggggc cgcaaaggtc
     6601 cagaattggc tcgatttccc tccatccagg aagggtttgt aacagaatac cataatgttg
     6661 gtgtgtgtgt tcttatctgg ttaagagaaa gtgaaaaaaa cacagcgaaa agaaatcgaa
     6721 aatgtgacaa atatcacagg tgttcgtcaa attgagttat ggcggcgtga tgatttacaa
     6781 cacccacggt tagatgaggt cgcggaagaa gttcccgttg cgctggtcta caacggcatt
     6841 tcgcatgtgg tgatgatggc gtcgcccaaa gaccttgagt actttgcgct cggtttttcg
     6901 ctttccgagg ggattatcga aagtccgcgc gatatcttcg gcatggatgt cgttccttcc
     6961 tgtaatggtc ttgaagtaca aattgagctt tccagccgcc gctttatggg gttgaaggag
     7021 cgccgccggg cgctggcggg acgtacgggc tgtggcgtat gcggcgtgga gcaacttaat
     7081 gacatcggaa aaccggtgca gccgctaccg ttcacccaga cgtttgatct caacaaactg
     7141 gatgatgcat tacgtcatct caacgatttt cagccagtgg ggcaactgac tggttgtact
     7201 cacgccgctg cctggatgtt gccatctggc gaactggtcg gcgggcatga agacgtgggt
     7261 cgccatgtgg cgctggacaa actgttaggc cgccggtcac aagaagggga aagctggcag
     7321 caaggtgcgg tactggtttc cagtcgtgcc agttatgaaa tggtgcaaaa gtcggcgatg
     7381 tgcggcgtag agattttgtt tgcggtgtct gccgcgacca cgcttgctgt agaagtggct
     7441 gagcgctgta atctgacact ggtaggtttt tgtaaaccgg gtcgggcaac ggtttatacc
     7501 catccgcagc gtttgagcaa ttaattaaaa taagtcctgc gatatatatt aaattgcagg
     7561 acttattcat ttcgtgaatt ttattatttt tatttataaa taaaacgcgt gtagtggcgt
     7621 tttctttttt catttattat gttcactctc ttatctatat atttataagg caattaaatg
     7681 aaaaggaatt tattatcttc cgctattata gtcgccatca tggccctcgg tctgacgggt
     7741 tgtgatgata aaaaagccga aacagaaacg cccccgcctg ccaatagtca acctgccgca
     7801 ccagctcctg aagctcccgt tgcaaaagca gaagctaaac ctgaaacacc tgcgcaaccg
     7861 gtggtcgatg aacaagcggt tttcgacgaa aaaatggatg tctatatcaa gtgctataac
     7921 aagttacaga tccctgtaca gcgcagtctg gcgcgttatg ttgactggct gaaagatttt
     7981 aaacaggggc ctaccggtga agagcgtact gtttatggca tctacggcat tagtgaatcc
     8041 aacctcgctg agtgtgaaaa aggcgtaaaa agtgctgtgg cgttaacgcc tgcgctgcaa
     8101 ccaattgatg gcgtggcggt gagttatatc gatgctgccg tggcgttggg taataccatt
     8161 aacgaaatgg ataaatatta cacccaagaa aattataaag acgatgcgtt tgcgaaaggg
     8221 aaaacgctgc accagacatt cttaaaaaat ctggaagcct ttgaacctgt agcagaatct
     8281 tatcatgcgg cgattcagga aattaacgat aagcgccagc ttgcggaact gaaaaatatt
     8341 gaagaaagag aagggaaaat attccactac tattctctgg cagtcatgat ttcagcgaaa
     8401 caaattaata acctgatatc gcaagagaag tttgatgttg atgcggcaat gaagaaagtg
     8461 tctgaactgg aaacgctggt ggcgcaggcc aaagaagcgg ataaaggcgg catgaatttc
     8521 tcgtttatta attcggcagg ccagtatcaa ctcgaggcta aaaaatacgt tcgccgcatc
     8581 agagataaag tcccgtac
//
LOCUS       DADMIB010000177         8452 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.179, whole genome shotgun sequence.
ACCESSION   DADMIB010000177 DADMIB010000000
VERSION     DADMIB010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8452
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.179"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(141..2684)
                     /gene="mdoH"
                     /locus_tag="JNZ89_003725"
     CDS             complement(141..2684)
                     /gene="mdoH"
                     /locus_tag="JNZ89_003725"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HAY8937457.1"
                     /translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED
                     DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF
                     WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
                     PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
                     LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK
                     HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR
                     WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
                     TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
                     VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
                     VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
                     AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
                     HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF
                     WLAPIVFSLILSPFVSVISSRATVGLRTKHWKLFLIPEEYSPPQVLVDTDRFLEMNRQ
                     RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
                     LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ"
     gene            complement(2677..4212)
                     /gene="mdoG"
                     /locus_tag="JNZ89_003726"
     CDS             complement(2677..4212)
                     /gene="mdoG"
                     /locus_tag="JNZ89_003726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoG"
                     /protein_id="HAY8937458.1"
                     /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPK
                     SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
                     VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
                     GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY
                     KFVVMPGRDTVVDVQSKIYLRDKVGKLGGAPLTSMFLFGPNQPSPANNYRPELHDSNG
                     LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS
                     AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED
                     KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS
                     IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP
                     ANE"
     gene            4606..5763
                     /gene="mdoC"
                     /locus_tag="JNZ89_003727"
     CDS             4606..5763
                     /gene="mdoC"
                     /locus_tag="JNZ89_003727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706958.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoC"
                     /protein_id="HAY8937459.1"
                     /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEP
                     SLWLTLFNDFIHSFRMLVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL
                     TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI
                     RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL
                     FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES
                     VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
                     TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR"
     gene            complement(5771..7252)
                     /locus_tag="JNZ89_003728"
     CDS             complement(5771..7252)
                     /locus_tag="JNZ89_003728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706957.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HAY8937460.1"
                     /translation="MMKKTPTSTKDSLPNKEMNDLPRLASAVLPLCSQHPGQCGLFPL
                     EKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLVAAKRGVRVRLLLDDN
                     NTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVV
                     TLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDV
                     PEGEMADRIELPASWHNDAMTHRYLRQMESSPFINHLVDGTLPLIWAKTRLLSDDPAK
                     GEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTN
                     SLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKT
                     FSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDR
                     WGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL"
     gene            complement(7194..7727)
                     /gene="ymdB"
                     /locus_tag="JNZ89_003729"
     CDS             complement(7194..7727)
                     /gene="ymdB"
                     /locus_tag="JNZ89_003729"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HAY8937461.1"
                     /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP
                     ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL
                     NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD
                     EENAHLYERLLTQQGDE"
     gene            complement(7823..8137)
                     /locus_tag="JNZ89_003730"
     CDS             complement(7823..8137)
                     /locus_tag="JNZ89_003730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000901553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY8937462.1"
                     /translation="MNVQTFFKLSYARQFFFPFIAIAGSTAQGGVIHFYGQIVEPACD
                     VSTQSSPVEMNCPQNGSVPGKTYSSKALMSGNVKNAQVASVKVQYIDKQKKLAVMNIE
                     YN"
     gene            complement(8254..>8452)
                     /gene="csgC"
                     /locus_tag="JNZ89_003731"
     CDS             complement(8254..>8452)
                     /gene="csgC"
                     /locus_tag="JNZ89_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706954.2"
                     /note="involved in autoagglutination of curliated cells;
                     not involved in production of curli fibers; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HAY8937463.1"
                     /translation="LREGGSGQSQTKQEKTLSLPANQPIALTKLSLNISPEDRVKIVV
                     TVSDGQALHLSQQWPPSSEKS"
BASE COUNT         2105 a         2210 c         2003 g         2134 t
ORIGIN      
        1 aacgccggta tttttattgg ctcgttgttt ttgccggatg cggcgtgaac gccttaccca
       61 acctacaaaa tcttgcaaaa tcaataaatt gcaggaacga tgtaggcctg ataagcgtag
      121 cgcatcaggc aactacgttt ttattgcgaa gccgcatccg gtttacgcaa tgccagtgga
      181 ttgagcttta tcccttcgta ataactcacc catgaagaat atctctccgg ggaattccag
      241 acacggaaat gcagacgggc catcgtcacc ggatcgctta gcagcaccag gcgacgatcg
      301 cgattcagct tctctggcgt ctcgttaagc gcctgttcaa cgtggcggtc acgggcgatt
      361 tccagcacct tactggcgcg gtgacgcgcg gtcgccattg cggttgccag agcgttaaat
      421 gacgggttaa acaccgcgtg cataaaacca tcatcaaggg agcgttgacg attcatctca
      481 aggaagcgat cggtatcaac cagcacctgc ggcggtgaat actcttccgg gatcaggaac
      541 agtttccagt gtttggttcg cagaccaacg gtggcacggc tggaaatcac cgaaacaaac
      601 ggtgacagga tcaacgagaa gacaatcggt gccagccaga acaggaaacg cagatccagc
      661 cacgccatcc caacagccca cactaaccct aacagcagct gtgagccgtg gcgtttgaac
      721 gcttcacccc aggaagtgga gtcatcatca cgctgcggtg aattccacac cacttcccag
      781 ccaaggaacg cgctgacaac gaagaccgta tggaacagca tgcgtaccgg agccagcagc
      841 acggaaaaaa gcacttccag tagcaacgat aatgtaacgc gccagaagcc gccgtattct
      901 ttcgttcctt tgcaccagat aagcaaaatg ctcaataact tcggcaggaa caacagcacc
      961 atagtcgaag caaaaagtgc aatcgccagc tcaggacgcc actgcggcca caccgggaac
     1021 aactgccgtg gttgcaggaa gtattgcggt tcggtcaacg catgtactac ctgcaatgca
     1081 gtagagagcg cgaggaacat aaaccacagc ggagcggaga gataagacat cacgcccgtc
     1141 aggaacaccg cacggtgaac cgggtgcata cccttcacca ggaacagacg gaagttcatc
     1201 aggttaccgt ggcaccagcg gcggtcacgt tttagctcat caagcaagtt aggcggtaat
     1261 tcttcataag aacccgggag atcgtaagca atccagaccc cccaacctgc acggcgcatc
     1321 aacgccgctt ctacaaagtc atgtgacagg attgaaccgg caaaggaacc ttcgcccggc
     1381 agcggagcca gtgcgcagtg ctcgataaac ggtttcacgc ggataatcgc gttatgtccc
     1441 cagtagtgcg actcgccaag ttgccagaag tgcaaaccgg ctgtaaacag tggcccatac
     1501 acgcgggtcg cgaactgctg acagcgcgca tacagcgtat ccataccgga cgctttcggc
     1561 gacgactgaa tgatcccggc gttcgggttg gcttccatca ggcgcaccag cccgcacaaa
     1621 caatcaccgg tcattaccga gtcagcatcc agcaccacca tgtagctgta ctggctgccc
     1681 cagcgacggc agaagtcatc gatattaccg cttttacgct tcacgcggcg acggcggcgg
     1741 cgatagaaaa tctgaccttc gccaccgact tcagcgataa gctccatcca ggctttttgc
     1801 tctgcgacgc agatatccgg gttataactg tcactaagaa tgtagacatc aaagtgtttg
     1861 gcattcccgg tggcttttac tgattcccac gttgcacgca ggccagcaaa aacacggttc
     1921 acgtcttcgt tacagatagg catgatcaac gccgtgcgat gctccgggtt taatggttca
     1981 tcgccaactg ttgacgcaga tatactgtat ttatcgcgac caataagcag ttgcaggaag
     2041 cccattaacg ccgtccagaa tccggcggac acccaacaga acagtaccgc aaagaggatc
     2101 aggataccgg tttgcagcat ataaggcaga agctgcataa aggaaaccca caaatcctga
     2161 ccaaccatat ccataggatt aatcagcgcc caaccctgat aaggaagaat ggtcttcata
     2221 taccaggtcg cgacgacagt ttgcgcgagc gtcaggatca acagaatgta acggcggatg
     2281 gtaccgacgg tacgccactt ttgctcgctc tcctgctctt ctttggtcaa acgagccaga
     2341 tagcgcggcg tgacatcgcg tccacgcagg cgatcccaga aacggcctac cgggttggta
     2401 cgccacgggt cgggaaacat cgaggagcgt tttgcttctg gcatcgcctt cagctgatcg
     2461 cgcccttcgt cgtctttaat taactgtcca tcagcaagtg aatctggcca ggcttgttcc
     2521 agacgcgcct ttaccgagcc ttgcggggaa tcatcctccc gcgcccaggt gcggtgttcg
     2581 gcatccagcg cctgatgtac ggcgcggata tcagtcttcg gcaatgccgc tttctcgctt
     2641 gcggcgatgg gcattgcgtc aatgtactca gttgtcttat tcattggcag gtaactggta
     2701 gctccaggtt tcactcaacg tctgatcggc attcaccagc gcagcacgca tttcagtggt
     2761 tttcttggca tctttcactt tcacacgcat caccagacgc cagcctttgg taaccgggtt
     2821 atagcgcacc gtgctttcaa ctatctcacc attatcacca atgctggttt gcgctgtgac
     2881 cggggtatcc tctggcagtt ttttcatctc tgcgccggta aaatcgacca caaaggcgat
     2941 agtaccgtca ggctggcgaa tcaggttcga ctgcttcaca tcccccgttg aacgacgcgt
     3001 ttgttgcacc catgcgttat ctggcgcatg cagtttgtct tcatcacggc tgaaggtgat
     3061 ggtgtattta aagttcatct ctttacccgg ctccggcagc tgatccggcg tccagtaagc
     3121 gacgatgtta tcgttggttt catcgttggt tggaatttcc accagctcaa cgctgccttt
     3181 accccactcc cctttcggag tcacccatgc gcttggacga agatcgtaac gatcatcgag
     3241 atcttcaaag cgggagaaat cacgaccgcg ctgcaacaga ccgaagcctt gcgggttctc
     3301 catcgagaag ctgctaaccg ctaaatgttt cgggttattc aacggacgcc agatccattc
     3361 gccattaccg gcatggatag agagaccgtt agagtcgtgc aactccggac gatagttatt
     3421 tgcaggcgac ggttggttcg gcccaaacag gaacatactg gttaacggtg caccccccag
     3481 tttgccgact ttatcgcgca gatagatttt cgactgcaca tccacaaccg tgtcacgccc
     3541 tggcataacc acgaatttgt aagcacctgt cgcgcgcggc gagtcaagca atgcataaat
     3601 ggttaaacgt ttatcagtcg gttttggacg ctcgatccag aactctttga agcgtggaaa
     3661 ttcttcaccc gatggcaagg cggtatcaat tgccaggccg cgggcagaaa ggccataaac
     3721 ctgacctgca ccaatcacgc ggaaatagct ggccccgagc atgctgacga tttcatcgtt
     3781 tttatctttg ctgttgatcg ggtaaagcac tttaaaaccg gcaaaaccaa ggtcttttac
     3841 cgtgtctttg tcatgctgaa catcgccgaa agtgaaataa tccgggctgt atttgattcg
     3901 tttgactgcg gtggcagtca cttcatttat tttgaccggg gtatcgaagt acataccctg
     3961 atggtagaac tcgagtttga atggggtctt cagattgttc cagtacgctt tgtcatgatt
     4021 aaactggatc tgctgatagt ccgcgtattt catatcgcgg aaaacggagg gcaagttgct
     4081 tttgggcgcc tcatagcctt tcccggctaa ggattgagct tgctttgcga catcatcaat
     4141 actgaaagcc cagcttgaag atgtatacag ggttaacatt actgcagcac tcaaccaacg
     4201 cattttcatc atttgtagtt tatgtttcat aattagtaag cacttccccc tttgtgtgct
     4261 tatatcgatc cgatctattt taatggataa ccagccattc cgacaacaga atcccggtat
     4321 cgttcagcac gctggctcat ggattaagca cctgattgca accgttttca ctttccgtgc
     4381 ttctcctaaa gacagaagca tcgacttcgt gtagggtttg ccagcaattt tatttatcaa
     4441 ccgtcttaca gacgcttcca ttctggttag tggtagcgat tatgctatgc ataaaaacct
     4501 tgaagcctgc gcctggcgcg gtcaggtcgg tgtcgctatg gcaacaagcc taaaggcata
     4561 acccgacagg gataagacga aaaatccgag attagttaac catatatgaa tccagtaccc
     4621 gcgcaacgtg aatatttcct cgactccatc cgcgcctggc tgatgttgtt agggatccct
     4681 tttcatattt ctttaatcta ttcgagccat acatggcatg tgaatagcgc cgaaccgtca
     4741 ttgtggctga ccctttttaa tgacttcatc cactcgttcc gcatgctggt atttttcgtt
     4801 atatccggct acttttccta catgcttttt ttacgctatc ccttgaaaaa atggtggaaa
     4861 gtacgtgtcg aacgtgtagg tatcccgatg ttaacagcca tccccttact gacattgccg
     4921 caatttatta tgctgcaata cgtcaaaggg aaagcggaaa gttggcctgg gctgtcattg
     4981 tatgacaaat ataatacgtt ggcctgggaa ttaatatcac acctgtggtt tttactggtg
     5041 ttagtagtca tgacgacgct gtgcgtatgg atatttaaac gcatcagaaa taatttagaa
     5101 aattctgata aaacgaataa aaaattctcg atggtaaaac tatcggtgat ttttttatgc
     5161 ctcggcatcg gctatgcggt aataagaaga acgattttta ttgtgtatcc gcccattctg
     5221 agtaatggca tgttcaattt tattgtcatg caaacgctat tttatttgcc gttctttatc
     5281 ctcggtgcac tggctttcat tttccctcat cttaaagcct tgtttaccac gccgtctcgt
     5341 ggctgtaccc ttgcagcagc attggcattt gtcgcttatt tactcaacca acgctatggc
     5401 agtggcgatg cctggatgta cgaaaccgag tcggtgatca ccatggtcct cggtctgtgg
     5461 atggtgaatg tggtcttctc ctttggccac cgtttgctta acttccagtc agcgcgggtg
     5521 acttactttg ttaacgcatc gctatttatc tatctggttc accacccgtt aacgctgttt
     5581 ttcggcgcat acattacacc gcacatcacc tccaactggc ttggttttct ctgtggcctg
     5641 atattcgtag tagggattgc gataattctg tatgaaattc atttacgcat cccgttactg
     5701 aagtttttgt tttctggtaa accggttgtt aagcgtgaga acgataaagc accagcccgt
     5761 taagccacat ttacaataac cattccacgg gcaatatcga cgccagtctg accataaccc
     5821 gcttccagaa actggtggcg ggttcttttt tgagaataat ctctttcttt gcatgacgat
     5881 caacccagtt gatccgtccc cacctgtcca gacggagctg ccaggccgca tcatactggc
     5941 tctgtataaa gcgtttatca attaactgtg ccagcgtttc gctctctatc acgaagccca
     6001 tttcagtatt gagcaatgtc gaacgtggat cgaaattgaa agagccgata aacaccgttt
     6061 taccatcgat gctaaaggtt ttagcatgca ggctggcacc ggaattaccg gttatgccgc
     6121 gatcgtgtaa cgtactactt tgttcacgcg tcggcttgag ttcatataat tccacgccat
     6181 agcggagcaa ttttttgcgc cagcgcgcgt atccggcatg gacgacagca acatcgttag
     6241 cggcaagaga attggttagg atcgcaatct ttaccccttt tctcaccatc cgtaagagtt
     6301 gcgccacacc tgcgcgtgtc ggtacaaaat aggaagagat aatatcgatg cgttcactgg
     6361 gtgagcccat gatatcgaac aggcgctgcg gtaacagtga atgccgtttt gccttgccct
     6421 cccctttcgc cggatcatca cttaataaac gtgttttcgc ccagataagc ggcaacgttc
     6481 catcaaccag atgatttata aacggactgg attccatttg gcgtaagtaa cgatgcgtca
     6541 tggcatcgtt atgccaggag gcgggtaact cgatgcgatc cgccatttca ccttccggga
     6601 catccagcac ctgctgtaag ggtgaaaccg atttgcaata ccagtagcgg gcgaaatcat
     6661 cggcaacgtc ctctaccacg ggtcctattg ccataacatc taaatccgaa aaaagtggct
     6721 cttcccctgc cccaaaatag gcatcaccaa tatttcgtcc tcccaccaag gtaaccacgc
     6781 catcgacagt gaaactttta ttgtgcatac ggcgattgag acgggaaaag tcggtgatat
     6841 aaccaagcgg acgcagcaag cgaaacgaga aaggattaaa aagccggact tcaatgcggg
     6901 gatggctgtc aagcaagcgt aaaatatcgt caagtccggg cgtattgttg tcgtccagca
     6961 acaaacggac gcgaacgcca cgctttgctg cgactaacag ggcggaaaac agtaaccgac
     7021 ccgacatatc gtcctgccag atgtaatact gaacatccag cgtatgctct gccatttcgg
     7081 ccagacgata ccgggcggca aacgcatcca gacttttctc cagagggaaa agaccacact
     7141 gaccgggatg ttgcgaacac agtggcagca ccgcgctcgc cagccggggc aaatcattca
     7201 tctccttgtt gggtaaggag tctttcgtag aggtgggcgt tttcttcatc ataacagaca
     7261 aagtatacct gttcgggtaa agcgtgacgg gtaataaatt ctgaaacggt ttttactgcg
     7321 atttcagccg ctgccgcacg agggtaacca taaaccccag tactgattgc aggaaatgcc
     7381 actgacgtat agctgtttgc cgccaccagt cgcagactat tgagataggc atcctgcaaa
     7441 agctggtctt cgttttgttc accaccacgc cagactggcc cgacggtgtg tactacggct
     7501 ttagcgggaa gatcgcctgc aagcgtaata acggcatgcc ccgtagggca atcgccctgc
     7561 tgttgcctga cttttaaaca ggcatccagc agggccggac ccgctgcgcg atgaatggcc
     7621 ccatcgacgc cgccgcctcc cattaatgac ggattagccg cattcacaat cacatcaacg
     7681 gccagtttgg taatatcacc ctgcacaaca tgaatacgcg ttttcataac gcctccttaa
     7741 caccttcttg tttcttaagt gtacagcagg ctttttggtt aaatcgcatt tttctactca
     7801 gcaacgtgcg ttgttcagaa acttagttat attcgatgtt cattacagcc agctttttct
     7861 gtttatcaat atactgcact tttactgagg ctacttgcgc gtttttgaca ttgccgctca
     7921 ttaacgcttt gctggaatag gtttttcccg gaacagaacc attctgtggg cagttcattt
     7981 ctacgggtga tgactgggtg ctgacgtcac atgccggttc cacaatttgg ccataaaaat
     8041 ggatcacgcc cccttgcgcg gtgcttcctg cgatggcaat aaaaggaaaa aaaaactgcc
     8101 gagcataaga gagtttaaaa aaggtctgaa catttattct atttcctcaa tgattagtca
     8161 tccttgaggg ttgtgttatc catactttca ggttggctga ttcgcagcag accattctct
     8221 ccagattcat cttatgctcg acatttcaac aaattaagac ttttctgaag agggcggcca
     8281 ttgttgtgat aaatgaagtg cctgtccatc agaaacagta acaactattt tcacccgatc
     8341 ttccggggaa atatttaaac tcaacttcgt caaagcaata ggttgattag caggcaatga
     8401 gagggtcttt tcttgcttcg tctgactttg ccctgaaccg ccttcgcgca gg
//
LOCUS       DADMIB010000178         8312 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.180, whole genome shotgun sequence.
ACCESSION   DADMIB010000178 DADMIB010000000
VERSION     DADMIB010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8312
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.180"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(95..1765)
                     /locus_tag="JNZ89_003732"
     CDS             complement(95..1765)
                     /locus_tag="JNZ89_003732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HscC"
                     /protein_id="HAY8937464.1"
                     /translation="MDNAELTIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS
                     MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL
                     KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL
                     HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEIHASAGDSFLGGEDFTHMLVDEVLKRA
                     EVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLL
                     NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV
                     ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV
                     ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL
                     LEVDVLLEDGSVKSRVINHSPVTLSAQQIEESRTRLSALKIYPRDMLINRTFKAKQEE
                     LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP"
     gene            complement(1849..2784)
                     /gene="rihA"
                     /locus_tag="JNZ89_003733"
     CDS             complement(1849..2784)
                     /gene="rihA"
                     /locus_tag="JNZ89_003733"
                     /EC_number="3.2.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-specific ribonucleoside hydrolase
                     RihA"
                     /protein_id="HAY8937465.1"
                     /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK
                     TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC
                     TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT
                     PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHIEDTERFRAIGNPVSTIVAE
                     LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVV
                     DYYYLTDNKPNATVMVDVDRQGFVDLLADRLKFYA"
     gene            complement(2902..3627)
                     /gene="gltL"
                     /locus_tag="JNZ89_003734"
     CDS             complement(2902..3627)
                     /gene="gltL"
                     /locus_tag="JNZ89_003734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020457015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter ATP binding
                     protein GltL"
                     /protein_id="HAY8937466.1"
                     /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
                     KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
                     VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF
                     DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
                     PKDAFFDDPKSDRAKDFLAKILH"
     gene            complement(3627..4301)
                     /gene="gltK"
                     /locus_tag="JNZ89_003735"
     CDS             complement(3627..4301)
                     /gene="gltK"
                     /locus_tag="JNZ89_003735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltK"
                     /protein_id="HAY8937467.1"
                     /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM
                     RLSSFAPVAWFAKAYVNIFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV
                     AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
                     QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY
                     LKRRTA"
     gene            complement(4301..5041)
                     /gene="gltJ"
                     /locus_tag="JNZ89_003736"
     CDS             complement(4301..5041)
                     /gene="gltJ"
                     /locus_tag="JNZ89_003736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltJ"
                     /protein_id="HAY8937468.1"
                     /translation="MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAF
                     LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA
                     ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL
                     LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
                     YVLINAIIMLVMTLVERKVRLPGNMGGK"
     gene            complement(5211..6119)
                     /gene="gltI"
                     /locus_tag="JNZ89_003737"
     CDS             complement(5211..6119)
                     /gene="gltI"
                     /locus_tag="JNZ89_003737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter
                     substrate-binding protein GltI"
                     /protein_id="HAY8937469.1"
                     /translation="MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVV
                     GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLL
                     QNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKDKAVVVTS
                     GTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK
                     PDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPP
                     KNLNMNFELSDEMKALFKEPNDKALN"
     gene            6574..>8312
                     /locus_tag="JNZ89_003738"
     CDS             6574..>8312
                     /locus_tag="JNZ89_003738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HAY8937470.1"
                     /translation="MSASSVKPLNVQLPAITLILFALCIGIFCYLAQWMSYEEVDQSA
                     LIHLGANVAPLTLSGEPWRLLSSIFLHSSVSHLLMNMFAFLVVGGVAEQILGKWRLLI
                     TWLFSGVFGGLISACYALRDSDQIVISVGASGAIMGIAGAAIATQLASGAGTYHKNQR
                     RVFSLLGMVALTLLYGARQTGIDNACHIGGLIAGGALGWLSARLSGQNRLVTEGGIIV
                     AGSLLLTGAIWLAQQQMDESVLQVRQSLREAFYPQEIEQERRQKKQQLAEERNALRET
                     LSAPVSREQASGDLLAEIADIHDMAISRDGNMLYAAIENTNSIVVFDLGQKKILHTFT
                     APIAKEKSVKHCGGCKDQGVRSLALSPDEKLIYATSFEANALSVINVATGEIIQSITT
                     GAHPDSLILSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDGAGTSGKPGAWV
                     MALSPDERTLLVPGAGRGNIVRINTITHQKEDFPAGDARGTISAMRFRPENGEVIFAD
                     SQGISRISVGDQQASIMTQWCSRSVYSVEGISPDGQYLALVSYGLQGYVILLNINAGQ
                     IIGVYPASYVNHLR"
BASE COUNT         2073 a         2054 c         2077 g         2108 t
ORIGIN      
        1 atgctctcgg caaaatcgcg atgttgttta gttgacgatg tgttttttgc gccgatgccg
       61 gatgcagcgt ttacgccgca tccggcagcc gtgtttatgg gatctcaatg gctaaataat
      121 cgctcgcccg ccgccgaact tcatccacgc gggccatgtc gtttgactgt agcgccgcat
      181 caaaatcggt gatcacccgg ccaatctctt ctcgctcgtc acccagcgct cgcgcccaca
      241 actcttcctg tttggcttta aaggtgcgat tgatgagcat atcgcgcgga taaattttca
      301 atgcggataa ccgcgtccga ctctcttcaa tctgctgcgc gctcaatgtt accgggctgt
      361 ggttaatcac tctggactta acgctgccgt cttccagaag cacgtcaact tcaagcaacc
      421 cgttgatatc ataactaaag cgaatatcaa tcgactgata agccccggtt ttcttcaacg
      481 gcacatcgaa ggattcaacc agaatgttat ttttaacttt gtggttttct ccctgataga
      541 cgttaaccgt aattgaatcc tgctccgggt gcatggtcga gtaagtttct acacgcgaca
      601 ccggtactgt ggtgtttcgt tcaataatcg gcgagaaaat gccggaaacg ccctggcggt
      661 taacttcaac gcccaacgag taagggcaaa tatcagtgag gattacctct tcaatatctt
      721 cactgcgtaa gcggcaggcg gcctggattg ctgcgcccag cgcgacaatg gtgctcggat
      781 cgtaactttg atacggtaat ttgccaaaca gacgcacggc gattcgctgc accagcggca
      841 tttgtgacgc gccgccaacc agcaccagac tgtcgatttg actcggcttc agacgcgcat
      901 cgcgcaacgc ctgttcaatc ggcactcgca agcgattgag cagcggcaac cacaaatctt
      961 ccagttcgtt ctcgtaaaat tcgcattccc gcgtttcttc ctgatactgc cagcgaatgt
     1021 gcaatggcga ttgattgcta cattttgccg cttccacaca ggcgtacaag gctgccagtt
     1081 cactctcgtt aagcgtggtc ctggcaactt ccgcgcgttt taaaacctca tcgaccagca
     1141 tatgggtaaa atcttcgcca ccgaggaagc tatcgccagc ggaggcgtga atttcaatca
     1201 ccggcgtggc gtactcaagc accgtaacgt caaacgtgcc gccaccgaga tcaaaaacca
     1261 gcgagcgggt attttgttgc gtatgcaggc catatgccat cgcagctgct gtgggttcat
     1321 taattaagcg taccgcattt aacccggcta actccgcagc taaacgggta tgcttgcgtt
     1381 gttcatcgct gaaataagcc ggaacggaga tcaccacatc tttaatcgga cgttgcagaa
     1441 attcttcggc atcttctttt aatgagcgta ataccaaaga ggacagttct ggcgcgttaa
     1501 atgtgtcgct gcctaaccgc cagttggtat tactgcccat tgcgcgttta aataacgctg
     1561 ccgttttatc cggatgcgaa gtacgccgtg atacagccgg ttttccgact aaaatatgat
     1621 tattttcatc catgctaatt atggatggtg ttaaatattc accgaactta tttggaatta
     1681 attgcgcggc accgtctttc cagacggcaa ttaaactatt ggtagtgccg agatcgatac
     1741 caatggtgag ttctgcatta tccattgcat ttatatcttg aaagaaaaag agataaacag
     1801 attaagacca cccaggtaac gcgtggtgat cttaatcaat gacgtgtgtt aagcgtaaaa
     1861 tttcagacga tcagccagta aatcaacaaa gccctgacga tcaacatcga ccattacagt
     1921 ggcattcggt ttattgtcag tcagataata ataatcaaca accgtcatac cctgggtata
     1981 tttcccctgt gtttccacgc caacccagcg ctcaacagtg gtaaacaact cgggtttcaa
     2041 cagccaggcg atggtgcatg ggtcatgcag cggtgcaccg acaaagcccc atttttcgtc
     2101 tttatgatat tcgaggaaga aatccagcag ttcggcaaca atggttgaaa cagggttgcc
     2161 aatcgcgcgg aaacgctcgg tgtcttcaat gtggatttgc gctttatgag taacatccag
     2221 accggccatc accactggga tccctgactg gaagacaatt tctgccgctt ccgggtcaac
     2281 gtaaatatta aattcagccg caggcgtcca gttaccaagc cccattgcgc cgcccataat
     2341 cacgatacgg gcaattttgc tatgcagttc cggatggcta ttgagcagca aggcaacgtt
     2401 agtttgcggt ccggtagaca caatcgtgac aggttccgca ctttcgcgca gcgttttcgc
     2461 catcagctct accgccgtac agttttgcgg tgcgaacgtc ggttccggta atgccgggcc
     2521 atccagaccg ctttcgccgt gcacattgtc cgcgataatc aactcacgca ttaacggttt
     2581 taccgcgccg cctgctaccg gaatatcggt gcgattaagc aaggtcagca tacgcagaac
     2641 attgcgtaag gttttttctg gtgtctggtt tccggcggaa gacgtaattg ctttgacatc
     2701 aagctctggt gaggcgaggg cgagaactat tgcgatagcg tcgtcatgac ctgggtcgca
     2761 atctaacaga attggcagtg ccattgttgc tccttgttgt gtgcttcttt gcgacaaggg
     2821 taacgccagg atgtaacaga tacgaggggc gaaacgataa agcgtgagat ggcgcgcact
     2881 tgggtatgcg cgccagagtg attaatgcag gattttcgcg aggaagtctt tcgcgcggtc
     2941 cgatttcgga tcatcgaaga aagcgtcttt cggcgagtct tcgacaattt taccctcgtc
     3001 cataaagatc acccgattcg ccactttgcg ggcaaagccc atttcgtggg tcaccaccat
     3061 catggtcatt ccttcgttcg ccagttccac catcacgtcc agcacttcgt tgatcatctc
     3121 cggatccagc gccgatgtcg gttcgtcgaa cagcatcgca ataggatcca tacacaacgc
     3181 gcgagcgatt gccacacgct gctgctgacc gccggaaagc tgcgccggaa atttattggc
     3241 atgtgcggaa agtcccacgc gctccagcaa tttcaatgct ttttcacgag cgggcgcttt
     3301 atcgcgttta agcactttca cctgcgccag agtcaggttt tcaataatcg acaaatgggg
     3361 gaacaactca aaatgctgga acaccatccc gacgcgggaa cgcagctttg ccagatcggt
     3421 tttcttgtca ttaaccacga taccatcgac ggtgatttca ccttgctgca ctggttcgag
     3481 gccgttgacg gttttaatca gcgttgattt gccggaacca gacgggccgc aaaccaccac
     3541 cacttcgcct tttttcactt cggttgagca gtcggtcagc acctgaaagt gaccatacca
     3601 ttttgaaaca tttttcaggg taatcattat gctgtccttc ttttcaagta gctgaccaac
     3661 aacgacgcgc taagactaat aacgaaataa acaaatccgg caaacaggat catctcaacc
     3721 tgcgtaccat cacgctcacc aatggttgag gcggtacgga agaaatcggc cagagataac
     3781 acatacacca gtgaggtatc ctggaacagt acgatgccct gagtgagcag aagcggcacc
     3841 atcgcgcgga acgcctgcgg cagaataatc agtttcatcg actgccagtg agtcattccc
     3901 aacgccagcg cggcgctcga ctgaccacga gaaatacttt gaataccagc acggataatc
     3961 tctgaatagt aggccgcttc aaacatcgaa aacgccacca tcgccgaaat taaacggata
     4021 tcattttttg gtgataatcc cagcacgttt tgcagaaaac ctggcacgat caggtaaaac
     4081 cacagcaaaa ccataactaa aggaatcgag cggaatatgt taacgtaggc tttggcaaac
     4141 cacgctacgg gcgcaaagct ggacaagcgc atcaccgcca gcatggtgcc ccacaaaata
     4201 ccaatcacga ctgccgtgac ggtgattttc agcgtgatca ccagcccgtc gagcagatat
     4261 ggcagggaag ggacaatgga actccagtca aactcgtaca ttatttgccc cccatgttgc
     4321 caggcaggcg aactttacgt tcaaccagcg tcattaccag catgataatc gcgttaatca
     4381 acacatacgc cagcgtaata gcggtaaacg actcccaggc gtgggctgag taatcaagca
     4441 atttacccgc ctgcgccgcc atatccacca gaccaatagt cgaggcgatg gcggagtttt
     4501 tcaccaggtt catcatctcg gaagtcatcg gcgggacgat aacgcgataa gcattaggca
     4561 gcagtacgta tcgataagcc tgcggtagcg tcaggcccat cgccagcgcg gcattttttt
     4621 gcccacgcgg caacgactga atggcggcgc gtacctgttc gcaaacacgg gcggcggtaa
     4681 acagccccag gcagagcatg gatgaaagga aaaactgaat attgggatcc agctcggcct
     4741 taaaccacat gccgattttc tccggcaaca gctccgggat caccagatac caggtaaaga
     4801 attgcacaat caacggcacg ttgcggaaca gttcgacata caacgtaccc agaccggaga
     4861 gaaaacggtt tggaacggta cgtaaaatgc cgaaaaatga accgacgagg aaagcgataa
     4921 tccaggcgca gatcgacaaa gcgatcgtca cctgaaaacc actccagatc caaccaagat
     4981 aggtggtgtt gccgaacggg gcttgttgta aaaaaatacc ccagttccag tctatagaca
     5041 taaatctact ccagaaaaaa gagggtagca gcgttaactg ctaccctcga agattgttac
     5101 ccagcgtatt gcggttttca ggcccgatgg ggaacgacca tcaggcgtat agtctgtccg
     5161 tgctacgtaa caatcgagag ggctggaatt tccgcccctg gttcttgtaa ttagttcagt
     5221 gctttgtcat tcggttcttt gaacagtgct ttcatttcgt ctgacagttc gaaattcatg
     5281 ttcaggtttt tcggcggaat tggatttttg aaccatttat caaaccattt ttccgcttca
     5341 ccggaagtct gcacctgagc gatagtgtca tccatcagct ttttgaactg cggatcatct
     5401 ttacgcaaca tgcaaccgta ggcttcctga gactgcggct tgccgacgat atcccagttg
     5461 tctggtttct tcgctttcgc acgttcaccg gccagcaggg catcatccat cataaaggca
     5521 acggcacgac cgctttccag ggtgcggaaa gagtcaccgt gatctttggc gctgatgatg
     5581 cgcatattca ttttttgctc ttcattcagt ttgttgagca aaacttcaga ggtagtgccg
     5641 gaagtgacga ctacggcttt gtctttcagg tcggcaaaat ctttgatatc gccgcccttt
     5701 ttggtcagca ggcgcgtacc gaccacgaaa atagtatcag agaaagccgc ctgtttttgg
     5761 cgttcgacgt tgttggtggt agaaccacat tcaaaatcga aagtgccgtt ttgcagcagt
     5821 ggaatacggt tttgtgaggt aatcggaatc agttttacct gcaagtccgg tttgttgagt
     5881 ttctttttca ctgcttcaac aatggcgttg gagtaatcct gcgagtaacc caccactttt
     5941 tgctgattgt cgtaataaga gaaaggtact gaagattcac ggtgaccgac gacaatcaca
     6001 ccgtttttgg cgattttgtc cagcgtactg cctgctgccg gggcggcgtc atctgcctgt
     6061 gccagtcctg cggaaagcgc cagggcgagg attgctgtgg caggtttacg taattgcata
     6121 tccaactcct ttatcttctg cgttaagaac gcatggatac ccgttgtgag tgtttgtgtt
     6181 gttatcgtct gcaactttat tgtgcagtgt tgtgcctgtt aggtaacatt tagtttggct
     6241 aaatgtaaag atattgctgt tttattgttt gtttttgcga gatgcgccgc accattccga
     6301 agcaaaattc ttaaaccgca cctttttggt gctaccgctg atttgtggtg gtgcaacctg
     6361 gttgcgtcgc ggctgatttc atcgcttaca cagtaaataa agcaacttac atgccaaaaa
     6421 atacttaggg gcaaattaat tacgattgta attttaggct gaaaaagtca tatttcggac
     6481 agaattatct tttcggcatg ggacgtttgc cgggatgata actgcacacg ggaaaaatgc
     6541 tttttacctg tcttttcaag gaagaaacac cttatgtctg catcttcggt taagccgtta
     6601 aatgttcaat tacccgcaat aacccttatc ctttttgcac tctgtattgg gatattttgt
     6661 tatctcgcac aatggatgag ttatgaagag gtcgatcaat ccgcacttat ccatctcggc
     6721 gcaaacgttg cgcctcttac tttgtcgggt gaaccctggc gcttattgag cagtatcttt
     6781 ctgcacagta gtgtttctca tctgctgatg aatatgtttg cattcctggt cgtgggaggc
     6841 gtggcggaac agattctggg gaaatggcga ctcctgatta cctggttatt ctccggcgtc
     6901 tttggtgggc tcatcagcgc ctgttatgcg ttacgcgata gtgatcagat agtcatcagc
     6961 gttggggcat ccggggcaat tatgggaata gctggcgctg cgatagcaac acagcttgct
     7021 tcaggtgcgg gcacatacca taaaaaccag cggcgagtat tttctctgtt gggtatggtg
     7081 gcgctgacac tgttgtatgg tgcccggcaa acaggaatag ataatgcttg tcacattggc
     7141 ggcctgattg cgggtggcgc gttgggttgg ctgagcgcgc gtttatctgg gcaaaaccga
     7201 ctcgttacgg aaggcgggat tattgttgcg ggcagtcttc ttctgaccgg ggctatctgg
     7261 cttgcgcagc agcagatgga tgagtcagtt ttacaagtca ggcaaagcct gcgtgaagcg
     7321 ttttatccac aggagattga acaagagcga cggcaaaaaa agcagcagtt agcggaggaa
     7381 cgcaacgccc tcagggaaac attatccgct ccggtaagtc gtgaacaggc cagtggtgat
     7441 ttgctcgctg agattgccga tatccatgat atggcgatca gtcgggatgg taatatgttg
     7501 tatgccgcaa ttgaaaacac gaacagcatt gttgttttcg acctcggaca aaagaaaatc
     7561 ctgcatacct ttacagcgcc catagcgaaa gaaaagtcag tcaaacattg tggtggctgt
     7621 aaagatcagg gcgtcagatc gctggcatta agcccggatg aaaagttgat ttatgcgact
     7681 tcatttgaag cgaatgcgtt atcggtcatt aacgtggcga caggggagat tattcagtcg
     7741 attaccaccg gtgcacatcc tgacagcctt atcctctcgc gtgatggcac aaaagcctgg
     7801 gtgatgaatc gcaccagtaa tagtgtgtca gcgattgatc tggtgactta tcagcatgtg
     7861 gcggatatcc cgctggagaa atacgacggg gcggggacga gcggtaaacc aggcgcctgg
     7921 gttatggcac tttccccgga tgaaagaaca ttactggttc cgggagcagg cagaggtaac
     7981 atcgtgcgga tcaataccat cacgcatcag aaagaagact ttcccgcagg tgatgcgcgt
     8041 ggaacgatat cggcgatgcg ttttcgacct gaaaacggcg aggttatttt tgcagatagt
     8101 caggggattt cacgtataag cgtaggggat caacaagcca gcattatgac gcaatggtgt
     8161 agcaggagcg tttattccgt tgagggtatt agcccggacg gtcaatattt agcgttggtg
     8221 tcatatggcc tgcaaggtta tgtcatcctg ctcaatatta atgccgggca gattattggc
     8281 gtttatcctg ccagctacgt taatcacctt cg
//
LOCUS       DADMIB010000179         8250 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.181, whole genome shotgun sequence.
ACCESSION   DADMIB010000179 DADMIB010000000
VERSION     DADMIB010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8250
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.181"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..415
                     /locus_tag="JNZ89_003739"
     CDS             <1..415
                     /locus_tag="JNZ89_003739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HAY8937471.1"
                     /translation="LHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQIELAKSGR
                     SFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTVVASLF
                     ALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
     gene            complement(477..1097)
                     /gene="rhtB"
                     /locus_tag="JNZ89_003740"
     CDS             complement(477..1097)
                     /gene="rhtB"
                     /locus_tag="JNZ89_003740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine/homoserine lactone efflux protein"
                     /protein_id="HAY8937472.1"
                     /translation="MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIA
                     GLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSL
                     ASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDII
                     VMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA"
     gene            1208..2230
                     /gene="pldB"
                     /locus_tag="JNZ89_003741"
     CDS             1208..2230
                     /gene="pldB"
                     /locus_tag="JNZ89_003741"
                     /EC_number="3.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase L2"
                     /protein_id="HAY8937473.1"
                     /translation="MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVR
                     FVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADP
                     HLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIA
                     LTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRY
                     RRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNR
                     MHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSG
                     NRSTEV"
     gene            2238..3038
                     /gene="yigL"
                     /locus_tag="JNZ89_003742"
     CDS             2238..3038
                     /gene="yigL"
                     /locus_tag="JNZ89_003742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar/pyridoxal phosphate phosphatase YigL"
                     /protein_id="HAY8937474.1"
                     /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGR
                     HHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDII
                     TNVYRDDEWFMNRHRPEEMRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEQLLPL
                     EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMND
                     AEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS"
     gene            3114..4013
                     /gene="bioP"
                     /locus_tag="JNZ89_003743"
     CDS             3114..4013
                     /gene="bioP"
                     /locus_tag="JNZ89_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter"
                     /protein_id="HAY8937475.1"
                     /translation="MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFL
                     PFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIY
                     DIMNKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKR
                     LMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIG
                     YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTLITGALVILASLWVH
                     RKWVAPRSSQTADDRRRDCALSE"
     gene            complement(3901..4854)
                     /gene="metR"
                     /locus_tag="JNZ89_003744"
     CDS             complement(3901..4854)
                     /gene="metR"
                     /locus_tag="JNZ89_003744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MetR"
                     /protein_id="HAY8937476.1"
                     /translation="MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRL
                     GFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQ
                     WLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFD
                     YEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSV
                     DNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQP
                     VTEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL"
     gene            5090..7351
                     /gene="metE"
                     /locus_tag="JNZ89_003745"
     CDS             5090..7351
                     /gene="metE"
                     /locus_tag="JNZ89_003745"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HAY8937477.1"
                     /translation="MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELR
                     ARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRG
                     RAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPV
                     LLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELP
                     QAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDGVAEL
                     HKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSV
                     ETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAV
                     EKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKG
                     NLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
                     VQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
                     DVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEA
                     FRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDY
                     PNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAAL
                     ANMVQAAQNLRRG"
     gene            complement(7636..7881)
                     /locus_tag="JNZ89_003746"
     CDS             complement(7636..7881)
                     /locus_tag="JNZ89_003746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HAY8937478.1"
                     /translation="MITETEINVLKVMAEKDINWNWMNLDRTLSIRQIPGFGNVVNIV
                     NKLANEGLVIIEDSGHKSMPHYHVTEKGYNFVKSENK"
     gene            complement(7871..>8250)
                     /locus_tag="JNZ89_003747"
     CDS             complement(7871..>8250)
                     /locus_tag="JNZ89_003747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937479.1"
                     /translation="FNPDLAGGPIENLTTDGVTINREGIAIVEKHIARFGHDPVNEVM
                     INRLKDIEKGKIPPEQVDLNFYTHECREYQRYCNLGWETGQPDGDAGYALWNHTHTAT
                     LEDYKLKGELNDLYHQDALDYDN"
BASE COUNT         1895 a         2067 c         2217 g         2071 t
ORIGIN      
        1 gctgcatacg ctgattatgg ttggcggtgg cctgtatctc tgctggatgg gttaccagat
       61 gctacgcggt gcactgaaaa aagaggctgt atctgcgcct gcaccacaga ttgagctggc
      121 gaaaagcggg cgcagtttcc tgaaaggttt actgaccaat ctcgctaatc cgaaagcgat
      181 tatctacttt ggctcggtgt tctcattgtt tgtcggtgat aacgttggca ctaccgcgcg
      241 ctggggcatt tttgcgctga tcattgtcga aacactggcg tggtttaccg tcgttgccag
      301 cctgtttgcc ctgccgcaaa tgcgccgtgg ttatcaacgt ctggcgaagt ggattgatgg
      361 ttttgccggg gcgttatttg ccggatttgg cattcatttg attatttcgc ggtgatgcca
      421 gacgcgtctt cagagtaagt cggataaggc gtttacgccg catccgacat tatttttcac
      481 gcatgcctcg ccgatgctaa cagcgctccc accagcataa acaacgagcc gaaaatctta
      541 ttcagcgcct tcatctgctt tggtccttta atccatagag caatccgttg agcaagggtg
      601 gcgtaaccga tcatcacaat aatatcgact acaatagtgg tgacgccgag cacgatatac
      661 tgcatcagtt gcggctgctg tggcatgatg aattgcggaa atagcgccgc cagaaacaca
      721 atacttttgg gattggtgag attcacaaaa actgcgcgct ggaacaaatg tcgacgcgat
      781 tgagtagagg caagcgattt aaggtcaatt gcaccagcgg cgcgccactg ctggattccc
      841 agccaaatca agtaagccgc gcctgcccac ttcaacactt caaacgcaat cactgagcgg
      901 gaaaatagcg tccccaaacc cacgccaacc agcacaatat gaatcgccag tccggtctga
      961 agcccagcaa tagacgccac cgcgccgcga taaccgtggt tgagcgaggt ggtcatagtg
     1021 ttgattgcac cagagcctgg cgacaggctt aaaatgatcg atgtcagcag gtaggcaaac
     1081 caccattcta aggtcatgat gaactcccgg tgtgtctatt tttgtgccac aatacgctac
     1141 tgtcgcagcg ttgtgtcagg cacgctaaaa aaaacgattt tacgtggttt aagaggcaga
     1201 ttacccgatg tttcagcagc aaaaagactg ggaaacaaga gaaaacgcgt ttgctgcttt
     1261 taccatggga ccgctgactg atttctggcg tcagcgtgat gaagcagagt ttactggtgt
     1321 ggatgacatt ccggtgcgct ttgtccgttt tcgcgcacag caccatgacc gggtggtagt
     1381 catctgcccg gggcgtattg agagctacgt aaaatatgcg gaactggcct atgacctgtt
     1441 ccatttgggg tttgatgtct taatcatcga ccatcgcggg cagggacgtt ccggtcgcct
     1501 gttagccgat ccgcatctcg ggcatgttaa tcgctttaat gattatgttg atgatctggc
     1561 ggcattctgg cagcaggagg tccagcccgg tccgtggcgt aaacgctata tactggcaca
     1621 ttcgatgggc ggtgcgatct ccacattatt tctgcaacgc catccaggtg tatgtgacgc
     1681 cattgcgcta actgcgccaa tgtttgggat cgtgattcgt atgccgtcat ttatggcacg
     1741 gcagatcctc aactgggccg aagcgcatcc acgtttccgt gatggctatg caataggcac
     1801 cgggcgctgg cgcgcgttgc cgtttgctat caacgtactg acccacagca gacagcgata
     1861 tcgacgtaac ttacgcttct atgctgatga cccaacgatt cgcgtcggtg ggccgaccta
     1921 ccattgggta cgcgaaagta ttctggctgg cgaacaggtg ttagccggtg cgggtgatga
     1981 cgccacgcca acgcttctct tgcaggctga agaggaacgc gtggtggata accgcatgca
     2041 tgaccgtttt tgtgaactcc gcaccgccgc gggccatcct gtcgaaggag gacggccgtt
     2101 ggtaattaaa ggtgcttacc atgagatcct ttttgaaaag gacgcaatgc gctcagtcgc
     2161 gctccacgcc atcgttgatt ttttcaacag gcataactca cccagcggaa accgctctac
     2221 agaggtttaa atttcttatg taccaggttg ttgcgtctga tttagatggc acgttacttt
     2281 ctcccgacca tacgttatcc ccttacgcca aagaaactct gaagctgctc accgcgcgcg
     2341 gcatcaactt tgtgtttgcg accggtcgtc accacgttga tgtggggcaa attcgcgata
     2401 atctggagat taagtcttac atgattacct ccaatggtgc gcgcgttcac gatctggatg
     2461 gtaatctgat ttttgctcat aacctggatc gcgacattgc cagcgatctg tttggcgtag
     2521 tcaacgacaa tccggacatc attactaacg tttatcgcga cgacgaatgg tttatgaatc
     2581 gccatcgccc ggaagagatg cgctttttta aagaagcggt gttcaaatat gcgctgtatg
     2641 agcctggatt actggagccg gaaggcgtca gcaaagtgtt cttcacctgc gattcccatg
     2701 aacaactgct gccgctggag caggcgatta acgctcgttg gggcgatcgc gtcaacgtca
     2761 gtttctctac cttaacctgt ctggaagtga tggcgggcgg cgtttcaaaa ggccatgcgc
     2821 tggaagcggt ggcgaagaaa ctgggctaca gcctgaagga ttgtattgcg tttggtgacg
     2881 ggatgaacga cgccgaaatg ctgtcgatgg cggggaaagg ctgcattatg ggcagtgcgc
     2941 accagcgtct gaaagacctt catcccgagc tggaagtgat tggtactaat gccgacgacg
     3001 cggtgccgca ttatctgcgt aaactctatt tatcgtaatc gttctttatt tggtcagttg
     3061 tcaacctgat acttcgctac aatggatact cgttaatcaa agagttttcc attgtggcgc
     3121 tacttatcat caccacgatt ctgtgggcct tctcctttag cttttatggc gagtaccttg
     3181 cggggcacgt cgatagctat tttgcggtgc tggtgcgcgt tggcctggcg gcactcgttt
     3241 ttctgccgtt tctgcgtacc cgtggcaata gcctgaaaac agtcggcctg tatatgctgg
     3301 tgggcgcgat gcagctcggc gtgatgtata tgctgagttt ccgcgcttat ctctatctga
     3361 cggtttccga actgctgctg ttcaccgtac tgacgccgct ctacatcacg ctgatttatg
     3421 acatcatgaa taagcgccgt ctgcgctggg gatatgcttt tagtgccttg ttggcggtga
     3481 ttggtgccgg gattattcgc tatgatcagg tcaccgacca tttctggact ggcttgttgc
     3541 tggtgcaact ctccaatatc acttttgcca tcggcatggt gggttacaaa cgcctgatgg
     3601 aaactcgccc gatgccgcag cataacgcct ttgcgtggtt ctatcttggc gcgttcctgg
     3661 tggcggtaat tgcatggttc ttgctgggaa atgcgcagaa aatgccgcaa accacgttgc
     3721 aatggggcat tctggtgttt cttggcgtgg tggcttccgg gattggctac tttatgtgga
     3781 actacggcgc gacgcaggtg gacgccggaa cgctgggaat tatgaataat atgcacgttc
     3841 cggcagggct gctggtaaac ctggctatct ggcaccaaca gccgcactgg ccaacgttga
     3901 ttacaggcgc gctggtgatc ctggcctcac tgtgggtgca tcgtaagtgg gtcgctccgc
     3961 gctcttcaca aacggcagat gatcgcaggc gtgattgcgc gctgagcgaa taaacgcttc
     4021 cgtaactggc tgacgctgct cgccatcgcg cacggcggcg tacagtcggc tccacaagcc
     4081 ttcgcccagg gttttggtca ccaccagacc ctggcgctca aaactctcta ctacccaatg
     4141 cggtagcgcg gcaataccca tccgcgcggc aaccatctga atcaacaata aggtgttatc
     4201 gacgcttttc agtgacggac tgacgcctgc cggctgaaga aaatgccgcc agacatccag
     4261 tcgactacgc tgcaccggat aaattaatag cgtctcgctg gcgagatctt ccggtgtaat
     4321 acgcgttttt gccgccagtg gatggtcagg tgctaacacc agacgcactt catagtcgaa
     4381 catcggcgaa taatgcagac cactgcgcgg cagaatatcg gacgtcatta ccagatccag
     4441 ctctccctgt tgcaaggcgg gctgcgggtc aaatgtcacg cccgatttaa agtccatctc
     4501 gacctgcggc cagttcttat ggaaattttc taacgcgggc gtcagccact gtatacagct
     4561 atggcactca atggcaatgc gcagacgcgt ctgctgcggt tcattgcagg cttgcagtgc
     4621 ctggctaatt tgtggcagca cctggtttgc cagttgcaac aggatttctc cctgcggtgt
     4681 aaagcgaagc ggctggcttt tacgcacaaa tagccggaag ccaaggcgtt gttccagatc
     4741 gctaaactgg tgagacaggg cggattgcgt ttgatgcaac gtcgccgcag cggctgcgag
     4801 tgagccgcag ttccgcaacg cttgtagcgt tttcagatgt tttacttcga tcatgaaagt
     4861 ccttcacttc ggcatgaata atttgcgctt gaggaatata cagtaaccgc caattatgga
     4921 tgtgtaaaca tctggacggc taaaatcctt cgtcttttaa atttatggtg cgttggctgc
     4981 gtttctccac cccggtcact tacttcagta agctcccggg gatgaataaa cttgccgcct
     5041 tccctaaatt caaaatccat aggatttaca tataattaga ggaagaaaaa tgacaatatt
     5101 gaatcacacc ctcggtttcc ctcgcgttgg cctgcgtcgc gagctgaaaa aagcgcaaga
     5161 gagttattgg gcagggaact ccacgcgtga agaactgctg gcggtagggc gtgaattgcg
     5221 tgctcgtcac tgggatcaac aaaagcaagc gggtatcgac ctgctgccgg tgggcgattt
     5281 tgcctggtac gatcatgtac tgaccaccag tctgctgctg ggtaacgttc cggcgcgtca
     5341 tcagaacaaa gatggttcgg tagatattga caccctgttc cgtattggtc gtggacgtgc
     5401 gccgactggc gaacctgcgg cggcagcgga aatgaccaaa tggtttaaca ccaactatca
     5461 ctacatggtg ccggaattcg ttaaaggcca acagttcaaa ctgacctgga cgcagctgct
     5521 ggaggaagtg gacgaggcgc tggcgctggg ccacaacgtt aagcctgtgc tgctggggcc
     5581 ggttacctgg ctgtggctgg ggaaagtgaa aggtgaacag tttgaccgcc tgagcctgct
     5641 gaacgacatt ctgccggttt atcagcaagt gctggcagaa ctggagaaac gcggcatcga
     5701 gtgggtacag attgatgaac ccgcgctggt actggaacta ccacaggcgt ggctggacgc
     5761 atacaaaccc gcttacgacg cgctccaggg acaggtgaaa ctgctgctga ctacctattt
     5821 tgaaggcgtt acgccaaatc tcgacacgat tactgcgctg cctgttcagg gactgcatgt
     5881 ggaccttgta catggtaaag atggcgttgc tgaactgcac aagcgcctgc cttctgactg
     5941 gctgctgtct gcgggactga tcaatggtcg taacgtctgg cgcgccgatc ttactgagaa
     6001 atatgcgcaa attaaggaca ttgtcggcaa acgtgatttg tgggtggcat cttcctgctc
     6061 gttgctgcac agccccatcg acctgagcgt ggaaacgcgt cttgatgcag aagtgaaaag
     6121 ctggtttgcc ttcgccttac aaaaatgcca tgaactggca ctgctgcgcg atgcgctgaa
     6181 cagtggtgac acggcagctc tggcagagtg gagcgcccca attcaggcgc gtcgtcactc
     6241 tactcgtgta cataatccgg cggtagaaaa gcgtctggcg gcgatcaccg cccaggacag
     6301 ccagcgtgcg aatgtctatg aagtgcgtgc tgaagcccag cgtgcgcgtt ttaaactgcc
     6361 agcgtggccg accaccacga ttggttcctt cccgcaaacc acggaaattc gtaccctgcg
     6421 tctggatttc aaaaagggca atctcgacgc caacaactac cgcacgggca ttgcggaaca
     6481 tatcaagcag gccattgttg agcaggaacg tttgggactg gatgtgctgg tacatggcga
     6541 ggccgagcgt aatgacatgg tggaatactt tggcgagcac ctcgacggat ttgtctttac
     6601 gcaaaacggt tgggtacaga gctacggttc ccgctgcgtg aagccaccga ttgttattgg
     6661 tgacgttagt cgcccggcac cgattaccgt ggagtgggcg aagtatgcgc aatctctgac
     6721 tgataaaccg gtgaaaggga tgctgactgg cccggtgacc attctctgct ggtcgttccc
     6781 gcgtgaagat gtcagccgtg aaaccatcgc caaacaaatt gcgctggcgc tgcgtgatga
     6841 agtggcggac ctggaagccg caggaattgg catcatccag attgatgaac cggcgctgcg
     6901 cgaaggttta ccgctgcgtc gtagcgactg ggatgcatat ctccagtggg gcgtggaggc
     6961 cttccgtatc aacgccgccg tggcgaaaga tgacacacaa atccacactc acatgtgtta
     7021 ttgcgagttc aacgacatca tggattccat tgcggcactg gatgcagacg tcatcaccat
     7081 cgaaacctcg cgttccgaca tggagttgct ggagtcgttt gaagagtttg attatccgaa
     7141 tgaaatcggt ccaggcgtct atgacattca ctcgccaaac gtaccgagcg tagaatggat
     7201 tgaagccttg ctgaagaaag cggcaaaacg cattccggca gagcgcctgt gggtcaaccc
     7261 ggactgtggc ctgaaaacgc gcggctggcc agaaacccgc gcggcactgg cgaacatggt
     7321 gcaggcggcg cagaatttgc gtcggggatg atgaatatta acgagtcact gtaaattgca
     7381 gtacgatgaa agaggcaaaa ctgcctgata ccaggcctac ataatttatg caatttattg
     7441 aatttttgag ttttgttggc cggacaaggc gttcacgccg catccggcat gaacaacgcg
     7501 cactttgcca ataatctgat ggcttccatc accggaagcc attttgctat ctgcgcccgt
     7561 tcagatacag aaataaccga atcattttta cgcaaaatat aatcctgagc gatttgttca
     7621 gtaatcaacg ctacgttatt tattctcact tttcacgaaa ttgtatccct tttcagtaac
     7681 gtggtagtga ggcatagact tatgtccgct atcctcaata ataaccaaac cctcgttagc
     7741 taatttgtta acaatgttaa caacattacc gaatcctgga atttgcctta tggatagtgt
     7801 gcgatcgaga ttcatccagt tccagtttat atctttctca gccataactt tcagtacgtt
     7861 aatttcagtt tcagttatca tagtcaagtg catcctggtg gtataagtca ttaagttctc
     7921 ccttaagttt ataatcttct agagtagcag tatgcgtatg attccagagt gcatagcctg
     7981 cgtcaccatc aggttgtcct gtttcccaac caagattaca gtaacgctga tattcccgac
     8041 actcatgagt atagaagtta agatctactt gttctggggg gatttttcct ttctcaatgt
     8101 ctttcagtct attgatcatc acttcattta cagggtcatg accaaatctg gctatgtgtt
     8161 tttcaacaat agcgatacct tccctgttga ttgttacgcc atctgtcgtc agattttcta
     8221 ttggaccacc ggcaaggtcg ggattaaatg
//
LOCUS       DADMIB010000180         8193 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.182, whole genome shotgun sequence.
ACCESSION   DADMIB010000180 DADMIB010000000
VERSION     DADMIB010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8193
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.182"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..815)
                     /locus_tag="JNZ89_003748"
     CDS             complement(<1..815)
                     /locus_tag="JNZ89_003748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY8937480.1"
                     /translation="MKPAHNPSFFRSFCGLGCISRLSVEEQNITDYHRIWDNWAKEGA
                     ATEDRTQAVRLLKICLAFQEPALNLSLLRLRSLPYLPPHIQELNISSNELRSLPELPP
                     SLTVLKASDNRLSRLPALPPHLVALDVSLNRVLTCLPSLPSSLQSLSALLNSLETLPD
                     LPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRL
                     PELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTRTLQALQRLTSS"
     gene            907..993
                     /locus_tag="JNZ89_003749"
                     /pseudo
     CDS             907..993
                     /locus_tag="JNZ89_003749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869530.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1003..1083)
                     /locus_tag="JNZ89_003750"
                     /pseudo
     CDS             complement(1003..1083)
                     /locus_tag="JNZ89_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416850.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            1294..1383
                     /locus_tag="JNZ89_003751"
                     /pseudo
     CDS             1294..1383
                     /locus_tag="JNZ89_003751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311139.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 family protein"
     gene            1407..5921
                     /locus_tag="JNZ89_003752"
                     /pseudo
     CDS             1407..5921
                     /locus_tag="JNZ89_003752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000536590.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
     gene            5922..7571
                     /locus_tag="JNZ89_003753"
     CDS             5922..7571
                     /locus_tag="JNZ89_003753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2300 domain-containing protein"
                     /protein_id="HAY8937481.1"
                     /translation="MNWRRIVWLLALVTQPTLAEETPLQLALRGAQHDQLYQLSSSGV
                     TTVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRD
                     TALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLA
                     TLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTD
                     GTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKST
                     TAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDRE
                     AKSTPPEAAKAMTVAIHTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWT
                     QDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRS
                     TCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRN
                     FFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD"
     gene            7576..>8193
                     /locus_tag="JNZ89_003754"
     CDS             7576..>8193
                     /locus_tag="JNZ89_003754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937482.1"
                     /translation="MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASF
                     SQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKIQQGRLVVNGASMPQRVESDGSF
                     ARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHV
                     VTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQV"
BASE COUNT         2003 a         1968 c         2299 g         1923 t
ORIGIN      
        1 gaagaggtta atctttgcag ggcttgcaga gtgcgagtcg acaatggatt gttataaata
       61 ttaacatctg cataaatgtg cagattcatg atactgtctg gcaatgtgtt cagctgattg
      121 ttagggatat atagtgattg cagacgttgt ggaagttcgg gcagtctgtg tagttggttt
      181 tccccaacgt ttaaaagcct cagattttga ggaaggggcg gtagctcttg taatctgtta
      241 tcaaaagcac ttagttcctg tagttcacat ggtaattctg gtaaggcagt aagctggttg
      301 ttgccaacag aaagtttttg tagagccggg ggaagatcag gtagcgtctc caggctattg
      361 agaagggctg agagtgactg caaggaagat ggaagagaag gtaaacatgt taaaactctg
      421 ttaagtgaaa catcaagagc gaccaggtga ggcggaagag ccgggagcct gctcagtctg
      481 ttatcgctgg ctttaagtac agttaaggac ggagggagtt ctggcagaga gcgtagctca
      541 ttgctagaga tgttaagttc ttgtatgtgc gggggcaggt atgggagaga gcgtaatctg
      601 agtaaactta aattgagggc tggctcttga aaagccagac atattttcag taatcgaact
      661 gcctgtgttc ggtcttctgt tgcagcacct tccttggccc agttatccca gatgcggtga
      721 taatccgtga tattttgctc ttctacggat aaacgggata tacatcctaa accacaaaag
      781 gagcggaaaa aagaaggatt gtgggcaggt ttcatttatt attgatcctc attgtttata
      841 tattaatatg ttcgtgcaaa tggagtgagg attctttaaa aaaacgctcc tgtaaatagt
      901 taagaacagg aagaactgtt ggggatgtgg ctggccgaaa atgaaggggt gaagttctgg
      961 ctcaatgtgc tgactgaact gaaaaaacgc ggttggtcgc cctacctttt catcaagcca
     1021 gtagtctgcc caccactgca tcatttctct gcgcttatcg agatactgag catggttgta
     1081 aattcaacta acccagtgcg ttgacaaaaa attagcgcaa gaagacaaaa aatcaccttg
     1141 cgctaatgct ctgtatcagg tcactaatac cagctaagta gttgattcat agtgactgca
     1201 tatgttgtgc tttgtcgcat tttgtagtct attatttaat ctgtaacaac gataatacaa
     1261 tgaattttaa ttggtttttg tgattttgtc cttcttctga catggaagga cacccgatgg
     1321 atacccaacg attccaatcc caatttcatt ggcatttatc gtttaaattt tctggcgcga
     1381 tagcagcgtg cttgtctctg tctcttgtgg gaacagggct tgctaatgct gatgattcgc
     1441 ttccttccag taactatgcg ccgcccgccg ggggaacatt ctttttgctt gctgacagca
     1501 gttttagcag cagtgaagag gcgaaagtgc gactggaagc gccggggcgt gattatcggc
     1561 gctatcagat ggaagagtac ggcggcgtgg acgttcgcct gtatcgtatt cctgacccga
     1621 tggcattttt gcgccagcag aaaaacctgc atcgcattgt ggtgcaaccg caatatctgg
     1681 gcgacgggct gaacaatacg ctgacctggc tgtgggataa ctggtacggc aaatctcgcc
     1741 gcgtaatgca gcgtactttc tcttctcagt cacggcagaa tgtgactcag gcattacccg
     1801 aattacatct cggcaatgcc attattaaac cttcccgtta tgtacagaac aaccagtttt
     1861 ccccgctgaa aaaatatccc ttggtggaac agttccgtta tccactatgg caggctaaac
     1921 cggtcgagcc gcagcaaggg gtaaaactgg aaggcgcatc cagcaatttc atctcgccgc
     1981 agccgggtaa catttatatt cctctcggcc aacaagagcc gggactgtac ctcgtcgagg
     2041 cgatggttgg tgggtatcgg gcgacgacgg tggtgtttgt ttccgatacc gtggctctta
     2101 gcaaagtgtc aggcaacgag cttctggtgt ggaccgcggg taaaaaacag ggtgaagcga
     2161 agcccggctc agagatcttg tggactgacg gtcttggcgt gatgacccgc ggtgtgaccg
     2221 atgacagcgg taccttgcag ttacaacata tatcgccaga acgttcatac attctgggta
     2281 aggatgctga aggcggcgtt tttgtctccg agaacttctt ctacgaaagc gaaatctaca
     2341 acacccgctt gtatattttt accgatcgcc cgctatatcg cgcaggcgat cgtgtcgatg
     2401 ttaaagtgat gggccgcgag ttccacgatc cgttgcattc atcccccatc gtcagcgccc
     2461 cggcgaagct ttcggtgctg gacgctaacg gcagtctgtt gcaaaccgtc gatgtcacgc
     2521 tggatgcgcg caatggcggg cagggaagtt tccgcctgcc agaaaatgcc gttgccggag
     2581 gttatgagtt acgtcttgct taccgcaatc aggtctatag cagcagtttt cgcgtggcaa
     2641 actacatcaa gccacatttc gagattggtt tagctctcga caaaaaagaa ttcaaaactg
     2701 gcgaagcggt cagcggcaaa ctgcaactgc tctacccgga tggcgagccg gtaaaaaatg
     2761 cccgcgtgca gttaagtttg cgcgctcagc aattatcaat ggtcggtaac gatttgcgtt
     2821 atgccggacg tttccccgtg tcgctggaag gcagcgaaac ggtgtccgac gccagcggtc
     2881 atgtggcgtt aaatctcccc gccgccgata aaccgagccg ttatttgtta accgtctccg
     2941 ccagtgacgg cgcggcgtat cgtgtcacca ccaccaaaga gatcctcatt gaacgcggtc
     3001 tggcgcatta ctcattaagt actgccgcac aatacagtaa tagcggcgag tcggttgtgt
     3061 tccgttatgc cgcgctggaa tcttcaaaac aggttcctgt tacgtatgaa tggttgcgtc
     3121 tcgaagaccg cacgagccat agcggagagc taccgtcagg cggcaaatcc tttaccgtca
     3181 atttcgctaa acctggcaac tacaatctga cattacgcga taaagacggc ttaattctcg
     3241 ctgggttaag ttatgccgtc agcggtaagg gcagcacggc gcatacgggt acggtagata
     3301 tcgtggcgga taaaacgctg taccagccag gcgaaaccgc gaagatgctg attacctttc
     3361 cggagccaat tgatgaagca ttattgacgc tggaacgcga tcgcgtggaa cagcagtcgc
     3421 tgcttttgca tccggcaaac tggctaacgc tacaacgttt aaacgatacc cagtatgaag
     3481 cccgggttcc agtgagcaat tcctttgcgc ctaacatcac tttttcggtg ctgtataccc
     3541 gtaatggtca gtacagtttt cagaacgccg ggatcaaagt tgccgttcct cagcttgata
     3601 tccgggtgaa aacggacaaa acccattacc agccaggtga actggtcaat gtcgaattaa
     3661 cctcgtcgct gaaaggtaaa cctgtttctg cgcagctaac ggtaggcgtg gtcgatgaaa
     3721 tgatctacgc gctgcaacca gaaatcgcgc cgaatatcgg caaatttttc tatccgctgg
     3781 ggcgtaacaa tgtgcgtacc agctccagtc tgtcgtttat cagctacgac caggcgctct
     3841 ccagcgagcc ggttgcgcct ggcgcaacta accgcagcga gcggcgagta aaaatgcttg
     3901 aacgtccacg gcgtgaagag gtggataccg cggcatggat gccgtcactc acaaccgata
     3961 aacaaggcaa agcgtatttc acgttcctga tgcctgattc gttaacccgc tggcgtatca
     4021 ccgcgcgtgg gatgaacggc gacgggctgg tcgggcaggg gcgtgcttat ctgcgttcgg
     4081 aaaaaaatct ctacatgaag tggagtatgc caacggtgta tcgcgtgggc gacaaaccgg
     4141 cggcaggact gtttatcttc agtcagcagg ataacgaacc ggtggcgctg gtgactaaat
     4201 ttgcaggcgc tgagatgcgc cagacgctga cgctgcacaa aggggcgaat tatatttcgc
     4261 tggcgcagaa tattcagcaa tctggcttgt taagtgcaga actgcaacaa aatgggcaag
     4321 tgcaggacag cattagcaca aaactgtctt ttgtggacaa cagcaggccc gttgaacagc
     4381 agaaaaatgt catgctcggc ggtggcgaga acgcgctgat gttgcccgag caggcgagta
     4441 atatccggct acaaagtagt gaaacgccgc aggagatttt ccgcaacaat cttgatgcgt
     4501 tagtcgatga accgtggggt ggggtgatca acaccggtag ccgtctgatc ccgctcagtc
     4561 tcgcctggcg ttcgcttgcc gatcatcaaa gtgccgccgc taacgacatt cgtcagatga
     4621 ttcaggataa ccgtctgcgg ctgatgcaac tggcggggcc cggagcgcgc tttacctggt
     4681 ggggtgaaga tggcaatggt gacgccttcc ttacggcatg ggcatggtac gccgactggc
     4741 aggccagcta ggcgctcggc gtaacgcaac aaccggaata ctggcagcat atgctcgaca
     4801 gttatgccga gcaggcggat aacatgccgt tattgcatcg ggcgctggtg ctggcgtggg
     4861 cacaggagat gaatctgccg tgcaaaacgt tgttgaaagg gttggatgaa gctatcgccc
     4921 ggcgcggaac taaagatgaa gatttctctg aggaagacat ccgcgatatc aatgacagcc
     4981 tgatcctcga tacaccggaa tctccactgg cagatgcggt ggcaaacgtc ttaaccatga
     5041 cgttgctgaa aaaagcgcag ttgaagtcca cggtgatgcc acaggttcag caatatgcgt
     5101 gggataaagc ggcaaacagc aatcagccgc tggcgcacac ggttgtgctg ctcaatagcg
     5161 gtggtgacgc tacccagacg gccgctattt taagtggttt gaccgctgag caatccacta
     5221 ttgagcgcgc gctggccatg aactggctgg cgaaatatat ggcgacaatg cctccagttg
     5281 ttttgcctgc gcctgcgggc gcatgggcta aacataagtt aactggaggg ggcgaatact
     5341 ggcgttgggt tggtcagggc gtgccggaca ttctctcttt tggtgacgaa ttatcgccgc
     5401 aaaatgtgca ggtccgctgg cgtgagccgg caaaaatggc tcaacaaagt aacattccgg
     5461 tgaccgttga acgccagttg tatcggctta tccctggtga agaagagatg agctttattc
     5521 tgcaaccggt gaccagcaat gagattgaca gcgatgcgct gtatctcgat gacatcacgc
     5581 ttaccagcga gcaggatgca gttctgcgct acggtcaggt ggaagtaccg ctgccaccgg
     5641 gagccgacgt tgagcgcaca acatggggca tttcggtcaa taaacccaac gccgcgaaac
     5701 agcaggggca attgctggaa aaagcgcgaa atgaaatggg cgaactggcc tatatggtgc
     5761 cggtgaaaga actgacggga acggtcactt tccgccattt gctgcgcttc tcgcaaaaag
     5821 ggcaattcgt tctgcctcct gctcgttatg tgcgttccta tgcacctgca cagcaaagtg
     5881 ttgcggcagg gagtgaatgg accgggatgc aggtgaaata agtgaactgg cgcagaatcg
     5941 tctggctatt ggcgttggtt actcagccaa cgcttgcgga ggagacgccg ttacaactgg
     6001 cactgcgtgg tgcgcagcac gatcaactgt atcagctgtc gtcatcaggc gtgaccacag
     6061 tctcagcatt acctgactcg ctcaccacgc cgttagggag tttgtggaaa ctgtatgttt
     6121 acgcctggct ggaggatacc catcaaccgg agcagcccta ccagtgtcgc ggaaactccc
     6181 cggaagaggt ttattgttgt caggctgggg agagcataac gcgcgatacc gcgctggtac
     6241 gttcctgtgg gctctatttt gcgccgcagc ggttgcatat tggcgcagat gtgtgggggc
     6301 aatactggca acagcgtcag gcgcctgcgt ggttagcgtc tcttactacg ctgaagccag
     6361 aaacctcggt aacggttaaa tcgctgcttg attcattagc gacgttacct gcgcaaaaca
     6421 aagctcagga agtcttactg gatgtggtgc tggacgaggc gaaaatcggt gtcgcatcca
     6481 tgctcggtag tcgggtacgg gtgaaaacct ggagctggtt tgccgatgat aaacaggaaa
     6541 tccgtcaggg tggttttgcc ggctggttaa ccgatggtac accgctgtgg gttactggca
     6601 gtggcaccag caaaacggta ctaacccgtt atgcgacagt gcttaatcgg gttttgccag
     6661 tgccgacgca ggttgccagt gggcaatgtg tagaggtgga gctgtttgcc cgctatccgc
     6721 tgaagaaaat cacagcggaa aagagtacga cggcagtaaa acccggcgta cttaatgggc
     6781 gctatcgtgt gacgtttact aatggtaacc acattacgtt tgtcagccac ggtgagacga
     6841 ccttactgag cgaaaagggc aaactgaaat tgcagtcgca tctcgatcgt gaagagtacg
     6901 ttgccagagt tctggatcgc gaggcgaaaa gtacgccccc tgaggcagcg aaagccatga
     6961 ccgtggcgat tcacactttt ttacagcaaa acgccaatcg ggaaggcgat tgcctgacca
     7021 tccccgacag cagcgccacg cagcgtgttt ctgcttcgcc agcgaccacg ggggcgcgaa
     7081 cgatgaccgc ctggacgcag gatctcatct atgcaggcga tccggttcat tatcatggca
     7141 gtcgagctac cgaagggaca ctttcctggc ggcaagccac ggcccaggcg gggcagggag
     7201 agcgttacga ccagatactc gcgtttgctt atcccgacaa cagccttagc cgctggggag
     7261 cgccacgctc aacctgccag ttattaccca aagcgaaagc ctggctggcg aaaaaaatgc
     7321 cgcagtggcg gcgtatatta caaggcgaga cggggtacaa cgaaccagac gtgtttgcgg
     7381 tctgtcgttt agtctcaggt ttcccctata ccgatcggca gcagaaacgg ctgtttattc
     7441 gtaacttctt tacgcttcag gatcggctgg atttaaccca tgagtatctg cacctggcct
     7501 ttgatggtta tcccaccggg cttgatgaga actatatcga aacgctgacc cgacaattat
     7561 taatggacta atgctatgcg aaagattttt cttccgttgt tactggtggc actttcgcct
     7621 gtcgctcaca gtgaaggtgt gcaggaagtc gagattgacg caccgctctc tggctggcat
     7681 ccggcagagg gcgaagatgc cagtttttca caatcgatca attacccggc gtcgtccgtc
     7741 aacatggcag atgatcaaaa tatctcagcg cagatccgcg gcaaaataaa gaattatgct
     7801 gcggcgggta aaattcagca gggccggctg gtggtcaacg gtgccagtat gccgcagaga
     7861 gttgaatccg atggttcatt tgcacgccct tatattttca ctgaaggcag caacagcgtg
     7921 caggtcatca gcccggatgg gcaaagccga caaaaaatgc agttttactc aacgccgggt
     7981 acaggaacga ttcgtgcacg tttacggctg gttctctcgt gggatacgga caataccgat
     8041 ctcgatctcc atgttgtcac gcccgatggc gaacacgcct ggtacggtaa caccgtgctg
     8101 aaaaacagtg gtgcactgga tatggatgtc acgacggggt acggacccga gattttcgcc
     8161 atgccagcgc cagttcacgg acgctatcag gtg
//
LOCUS       DADMIB010000181         8146 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.183, whole genome shotgun sequence.
ACCESSION   DADMIB010000181 DADMIB010000000
VERSION     DADMIB010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8146
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.183"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            66..260
                     /locus_tag="JNZ89_003755"
     CDS             66..260
                     /locus_tag="JNZ89_003755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose carrier protein"
                     /protein_id="HAY8937483.1"
                     /translation="MQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRK
                     VPPEPVHADIPVGAVSDVKA"
     gene            complement(399..1028)
                     /locus_tag="JNZ89_003756"
     CDS             complement(399..1028)
                     /locus_tag="JNZ89_003756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HAY8937484.1"
                     /translation="MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIV
                     VPLLLATARRYPLTPLLYTLIFLHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDK
                     LGHFFQGLVPALVAREILVRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQ
                     GADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCRQLRRFGLITG"
     gene            complement(1151..2797)
                     /locus_tag="JNZ89_003757"
     CDS             complement(1151..2797)
                     /locus_tag="JNZ89_003757"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HAY8937485.1"
                     /translation="MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEP
                     EALTLLAQQAFHDASFMLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVL
                     PTCQDTGIAIIVGKKGQRVWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQEL
                     LEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
                     IEKLEHNPGQYIPQELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVG
                     RDIAHAKLKELIDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDL
                     LQSHGGSMIMLAKGNRSQQVTDTCHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIVNKQCANCTK"
     gene            complement(2875..4215)
                     /locus_tag="JNZ89_003758"
     CDS             complement(2875..4215)
                     /locus_tag="JNZ89_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HAY8937486.1"
                     /translation="MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQP
                     GKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTI
                     LCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLG
                     NVTFDGRHLEFLDLLAITIPSTLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREY
                     VYGDTATLLDKKLPKSNWLAMWIFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMF
                     MLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLG
                     EMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYIL
                     PTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL"
     gene            complement(4786..5505)
                     /gene="dcuR"
                     /locus_tag="JNZ89_003759"
     CDS             complement(4786..5505)
                     /gene="dcuR"
                     /locus_tag="JNZ89_003759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DcuR"
                     /protein_id="HAY8937487.1"
                     /translation="MSNVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIF
                     NSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVD
                     YLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLT
                     PQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTG
                     RPVYRYRIQAEHYSLLKQYCQ"
     gene            complement(5502..7133)
                     /gene="dcuS"
                     /locus_tag="JNZ89_003760"
     CDS             complement(5502..7133)
                     /gene="dcuS"
                     /locus_tag="JNZ89_003760"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DcuS"
                     /protein_id="HAY8937488.1"
                     /translation="MRHSLPYRMLLKRPMKLSTTVILMVSAVQFSVLLVVHLIYFSQI
                     SDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTD
                     MQSLRYSHPEAQRIGQPFKGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQI
                     GVVVSGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEIS
                     TLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQV
                     VDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRL
                     DGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYSLKTANNYKEEIGSLLGKI
                     KSPVIAGFLISKINRATDLGHTLILNSESLLPDSGSEDQVATLITTLGNLIENALEAL
                     GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVK
                     QQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR"
     gene            7314..7544
                     /gene="yjdI"
                     /locus_tag="JNZ89_003761"
     CDS             7314..7544
                     /gene="yjdI"
                     /locus_tag="JNZ89_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S mono-cluster protein YjdI"
                     /protein_id="HAY8937489.1"
                     /translation="MDQALLDEGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLK
                     RKPWIMPDEVDVVTVVKVIDTCPSGALKYRHK"
     gene            7556..7828
                     /locus_tag="JNZ89_003762"
     CDS             7556..7828
                     /locus_tag="JNZ89_003762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY8937490.1"
                     /translation="MEIREGHNKFYINDEQGKQIAEIVFVPTGENLAIIEHTDVDESL
                     KGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS"
     gene            8055..>8146
                     /gene="ghoS"
                     /locus_tag="JNZ89_003763"
     CDS             8055..>8146
                     /gene="ghoS"
                     /locus_tag="JNZ89_003763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HAY8937491.1"
                     /translation="MEGKNKFNTYVVSFDYPSSYSSVFLRLRSL"
BASE COUNT         2023 a         1969 c         2083 g         2071 t
ORIGIN      
        1 cggttgtgtt agggatgatt ggctatgtac cgaatgttga acagtctacg caagccctat
       61 taggtatgca gtttattatg attgctctac caactctgtt tttcatggta acgctgattc
      121 tctacttccg tttctatcgc ctcaatggtg acacgctgcg caggatccag atccatctgc
      181 tggataaata tcgcaaagta ccgcccgagc ctgttcatgc tgatattccg gtcggtgcag
      241 tgagtgatgt gaaagcctga cgtggacaat agctaacgaa aatggcctga tgcgatatgt
      301 ttatcaggcc acgtcttaat gtaatgcttt ggatttgcaa attttgtaga ccggataagg
      361 aattcacgct gcatccggca tcaacaaagc gcacgttgtt atccggttat caagccaaag
      421 cgccgtagct ggcggcaatg aaagcgagcg aggaatatca ccgtcgttaa tgcgccaagc
      481 agcgcgcaga acatatcgga ttgcgtgtcc cactggtcgc cctgggtgcc gagaaaatca
      541 tccgctccct gacccattgc cagcgccgcc caccactcga ttaattcata cattgcgctt
      601 atcgccagcg ccacgcagca gactaggaac gccaccattt tacgtccgcg cacgtacatc
      661 ccgcgaacga gaatttctcg tgccaccagt gcaggcacca gcccctggaa aaagtgcccc
      721 agcttgtcat acggattacg gctcaacccc agccattcct gcacctcaaa accaacgggg
      781 actttcgcgt aggtgtattg tccgccgacc atcaggatga tggcgtgaag gaaaatgagc
      841 gtatagagca gcggcgttaa cggataacgt ctggcggtgg caagcagtag cggcacgaca
      901 ataatcaccg gtgtcacttc catcagccag gtgagtttgt catgggccga aatgccggta
      961 taaatcagga ttaatgttag cgccagtgcg ccggtgttaa gaattaacgg cttgagtgtg
     1021 cgggtcatgg tgagttcgca aatcagggaa aatactgact attcaccagc aagcgtgaaa
     1081 ttacaatcgc aaaagaggtg gcccaggggg atcacctggc agcatgctgc caggcgctgg
     1141 gccgaagagg ttacttagtg cagttcgcgc actgtttgtt gacgatttgc tggaagaagt
     1201 cgttaccttt gtcatcgacc aagataaacg ccgggaaatc ttctacttcg attttccaga
     1261 tagcttccat acccagctcc ggataagcga cgcattccag atgcttgatg ctctgctgcg
     1321 ccagtaccgc cgccggaccg ccgatgctac cgaggtagaa gccgccgtgt ttatgacacg
     1381 tgtcggtaac ctgctgactg cggttacctt tcgccagcat gatcatgctg ccgccgtggg
     1441 attgcagcag atccacgtag gagtccatac ggcctgcggt ggttgggcca agtgaacctg
     1501 atggataacc ggcaggggtt ttcgccggac ccgcgtagta gatcgggtga tctttgatgt
     1561 actgcggaag ttctttaccg gcgtcaatca gctctttcag cttggcgtgt gcaatatctc
     1621 ggcccacgat aatggtgccg gtgagcgaca aacgagtgga taccgggtat tgcgaaagct
     1681 gggcgaggat ctctttcatc gggcggttaa ggtcaacttt caccgcttcg ccttcaccgg
     1741 cctggcgcag ttcttgtgga atgtactggc ctgggttgtg ttccagtttt tcgatccaga
     1801 taccttcgcg gttgattttc gctttaatgt tacggtcagc ggagcaggag acgcccatgc
     1861 cgaccgggca ggatgcgccg tgacgtggca gacggataac gcgaatgtcg tgcgcgaagt
     1921 atttaccgcc aaactgcgcg ccaagaccga gtttctgggc ctcttccagc agttcctgtt
     1981 ccagctggac atcgcggaac gcctgaccat gttcgttccc ttccgtcggc agttcatcgt
     2041 aatagtgagc gcttgctaac ttgacggttt tcaggttggt ttccgcagac gtaccgccaa
     2101 tcacaaacgc gatatggtac ggcgggcagg ctgcagtacc gagggtacgc attttctcga
     2161 cgaggaagtt tttcagtttg ccgggagtca gcagggcttt ggtttcctgg tagagatacg
     2221 ttttgttggc agagccgccg cctttcgcaa cgcaaaggaa tttgtactca tcgccatcta
     2281 ccgcgtacag gtcgatttgc gcaggcaggt tagtgccggt gttgacctct ttgtacatgt
     2341 ccagcgccgc attctgtgaa tagcgcaggt tatcttcgat ataggtgtta tagacgcctt
     2401 tcgacagcgc ttcttcatca ccgccgccgg tccacacgcg ctggcctttt ttaccgacga
     2461 tgatcgcgat gccggtatcc tggcaggtcg gcagcacgcc tttggcggcg atttcggaat
     2521 ttcttaagaa ttgcagcgcc acgtacttgt cgttttcgct ggcttctgga tcgtgaagaa
     2581 tagccgcaac ctgtttctgg tgtgccgggc ggagcataaa agaagcgtcg tgaaaggctt
     2641 gctgcgccag cagggtcagg gcttctggtt ccactttcag gatggtttcg ccgtcgaagt
     2701 cggcaacgct aacgtaatcg gaagtgagta gatagtattc ggtattgtct ttccccatcg
     2761 ggaaaggtgc ctggtagata aagggtttgt ttgacatagc ttccagcctg taactctgta
     2821 tttgttattc gaaaatggcg tgccgcgtag tcacgggcgg cacgcaaagt gcatttataa
     2881 gaacccgtac atcgcggcga agatccagcc gaagacgcac gatacgctca caccaatcaa
     2941 ccccggcaga ataaagctgt ggttgatgac gaagcgaccg atgtgggtgg tgccggaacg
     3001 gtcaaactga atcgctgcca gatcgctcgg ataagtcggc aggatgtaat aaccgtagca
     3061 agccggtgct gaagccacga tgtatgccgg atcaacgccg atcgccaacg cgaccggaac
     3121 aatcgccgcc agcgccgcag cctgagagtt tacaaacttg gaaaccagca gcagaacaat
     3181 ggcataggcc cacggatact ctttcaccat ttcacccagt acgccctgaa tttcagacat
     3241 atgcgcaccg aacatggttt ctgccatcca tgcgataccg tacaccgcca cgatggcgat
     3301 cataccggaa cggaagactt cgttttttga gatagacgcg ggattggttt tggtcaggat
     3361 aataatcagc gccccggtca gcagcataaa catctgaata accagtacca tcgacagcgg
     3421 tttgccgccg aaggatggac gcaggtccga atcagcacca agaagggcga ctacagcgat
     3481 tgccccgagg aaaatccaca ttgccagcca gttgcttttc ggcagttttt tatccagcag
     3541 cgtcgcggta tcaccgtaaa catactcacg gttttccggt acggagatga atttctggaa
     3601 ctcttcgtct ttatccagat ctttaccacg gaaccagctg aagataccga tcgccaggat
     3661 accgattaac gtcgatggaa tggtgattgc cagcaggtcg aggaactcaa gatggcgacc
     3721 atcaaaggtg acattaccca gcatcgcaac cagagacacg accgcaaccg acaccggact
     3781 ggcgataatc cccatctgtg caccgataga acttgccgcc atcggacgtt ccggacggat
     3841 gttgttctta atggcgacgt cgtagatgat cggcagaatg gtgtaaacca catgacccgt
     3901 accgcaaaga atggtcagcg tacaggtcac aaacggcgcg acaattgaga catatttcgg
     3961 gttgcggcgc agcaacttct cggcaatttg cagcatgaca tcaagaccgc ccgaagcttg
     4021 caaggtcgcc gatgccgcca ccaccgcaat gataaccagc atgacatcaa ccggtggttt
     4081 acctggctga aggtggaaga caaagaccag aatgaccaga ccgataccgc ctaataaacc
     4141 cagcgcgata cccccctttc tggcaccata aaacagacat atcagtatta tgataagttg
     4201 gatagtaaat aacatgtgtg aaccctcgcg ataatcctat ttaaattttt gctgaataga
     4261 tcacagtcac gttctgtttt gtatgaactg ttttcagagc ctgactaaat atccgtttgg
     4321 tcgttaccgg ctttagcaaa tacctcacag taaatattgg ctgattaaag cagcggcaaa
     4381 tttatgcact gtgataagcg gctttttcag agagaaaaac tctctggcga tgggtttata
     4441 gtttgtactg cgcagatgtt aatgttttgt ttgctgttat cttattgata tttatcggtc
     4501 tattttttgt tctcagggca gatatcatta ggtttaaaga ttaatcttat ctacccattt
     4561 gtgggtgaaa atacacataa tgcgggtgac ataatagtta attaactttt gttagcgttt
     4621 tgaaattaaa aacaccgttc acctgaagag atattaattt ttagcgatga tggagggata
     4681 attatatttg atctggcaca agttttactg atgaaggatg taacttgtgc caggggtatt
     4741 ttgcattacg gtaataatta ttacttacag ataaccagcg atccgttatt ggcaatattg
     4801 tttcagtagt gagtagtgtt ctgcctgaat acggtaacgg taaaccggac gccccgtgac
     4861 gccataatgg atactggtga acaagatgtg gcagttgacc agccagatga ggtatttacg
     4921 gcaggaaaca cgcgagatgt taacctcgtt agccagctcg tcggttgaaa actcatagtc
     4981 ctgatgcgcg tcaatccact ggcacagcgt gcgtaacgtc tgcggcgtta agccttttgg
     5041 caagcgacga ggatcctgtt cgttggagct gctgccgtgg attagctgat caagctcggc
     5101 ctggtcataa tactgatgtt tttccagcgc cattttcttt tgccgccagc cggtgagcgc
     5161 ctcttcaaag cgggaagcct ggaagggttt gatcaggtaa tccacgacac cgtaatgcag
     5221 cgaatcttta atggttgccg catcggctgc ggaggagatg acaatcacat cacttttgca
     5281 acgcgcgtta tgcaggacag gcagtaaatc gagcccgttc tctttttgca tatagatatc
     5341 gagcaatatc aggtcgatag gcgtatcgct attgaagata atctctttgg ctttctccag
     5401 cgtcgaggct gttccacagc attgaaagcc tgggatttgt gctacgtatc ggcgattcag
     5461 ctccgcgacc attgcgtcgt catcgataat taatacattg ctcatctgtt tgacctctcc
     5521 ccgtcccagg gtatctggac aaaaaattgt gtgaaaatcc cgggttccga ttccacggcg
     5581 atgctgccgc cgagattttc tacctgttgt ttgacaagtg ctaaaccgac gcctcgctcg
     5641 cttccttttg tcgagacacc tttgtcaaaa atgtgatcga ttttgtcggg tgcgatcccc
     5701 ggtccatcat cgttaacttc gcagtgcagc cagccgtgac ggtagtgcaa tgttacgcta
     5761 atttcgccac cgggttccgg ccctaatgct tccagcgcgt tttctatcag atttcccaat
     5821 gtggtaatca gcgtcgcgac ctggtcctca ctgccgctgt ctggcagcag gctttcactg
     5881 tttaaaatca gcgtatggcc taaatcggtc gcgcggttaa tcttgctgat taaaaaacca
     5941 gcgataaccg gagatttgat cttacccagc agagagccaa tctcttcctt atagttattg
     6001 gctgttttga gactgtaatc ttccaactgc ttataactct tcagatgcaa taatccgaga
     6061 atcacatgca atttattcat aaattcgtgg gatcgttcac gaagtgcatc agcatagttg
     6121 accagaccgt cgagtcgctg catcagttta cgaacttcag ttttgtccct gaaggttgaa
     6181 atggcaccga tgataacgcc attactgcgc accggaacgg tgttgatcag taatagccgg
     6241 tctttaatcg taatctcttc gtcgcggcgc ggcgtaccgt cgcgtaacac ttccgagaca
     6301 tctaccacct gtgaccatga gtggcttagc gtcgacagtt tctcatcgtc ctgcgactta
     6361 cggtaattca gcaattcttg tgcggcatcg ttgatcagcg tgacctcgcc gcgatcgtcc
     6421 acggcaacga cgccttcttt gatagactgc aacatggcct ggcgctgctc aaacagcgtg
     6481 gagatttcgt agggttccag gccgaaaagg atttttttca gtaccttaac cagaatgcag
     6541 gtgccaatca gtccgaccag catgccaaat aataccgacc agataatgct ccagcgactg
     6601 tcattgattt gttgggtcac gcggcttaac tcaaggccgc tcaccaccac gccaatttgt
     6661 ttatgatttt catcgtagat gggggtaaat acgcgtaaag cctgcgccag aaaaccgcga
     6721 ttgatagcga cattttcttt gccattcagc gctttaagga tgtcatcacc tttaaatggc
     6781 tgaccaatac gctgggcttc aggatgcgag tagcgaagac tttgcatatc cgtaacgaca
     6841 ataaacagca gatcgttgcg tttgcgcacg gcttccgcga tggcctggat tccgctctcc
     6901 tgcggttttt tctgcaagcc ctgacggatt tccggcgagt cggcgagggt acgcgccact
     6961 gccagtgcct tgttggccag cccgtctcgt gtcatatcac tgatttgcga gaagtaaatc
     7021 agatgcacca ccaatagcac cgagaactgt accgcgctga ccattaagat cactgtggta
     7081 ctcaatttca tcggacgttt gagtaacatg cggtagggca atgaatgtct catcagcttc
     7141 cttgtgtgac aaatttctta agcattatct ctgatgaggc gggtaattca aagggagtaa
     7201 gaatgattgg ctatataggg gaagagactc tggcaacgga aactgccagt gctgtatgaa
     7261 gattccaggg ctatgcttat agcgataatc atactgatga gagagggaaa gtcatggatc
     7321 aggcgctact ggacgagggt tatcgctgtt ataccggcga aaagatcgat gtctatttca
     7381 acactgcgat atgtcagcat tctggcaatt gcgtacgtgg caacggcaag ttatttaatc
     7441 tcaaacgaaa gccgtggatc atgccggatg aagtcgacgt cgtcactgtg gttaaagtga
     7501 ttgatacgtg cccgagcggc gcgctgaaat accgtcataa ataagcgagg gtaaaatgga
     7561 aatacgcgaa ggccacaata aattttacat taatgacgaa cagggcaagc aaatcgctga
     7621 aattgtcttt gtgccgaccg gagagaattt agcgattatc gaacataccg atgtcgatga
     7681 aagcctgaaa gggcagggga ttggtaaaca gctggttgcg aaagtcgtgg aaaaaatgcg
     7741 tcgggaaaaa cgaaaaatta tcccactatg cccatttgcg aaacacgaat ttgataaaac
     7801 gcgggagtat gatgatattc gcagttgatg ggagagtaca gagtcacgat atttttcatg
     7861 ctctccgcgg agtgatgcag gagagcatct gaagggtagg gggatgcaca aagaatgggc
     7921 agagagcgcg tttttttgtc ccaagtcatc ccctttactg agcaaaaaaa agaatatctc
     7981 ctatatgaga atcatcaatc ggggttaata agttttgcgt ccccagagca ttcaatattg
     8041 ataggagtca tattatggaa ggtaaaaaca agttcaatac ttatgttgtt tcttttgatt
     8101 atccatcatc ttattcctca gtgttcttaa ggttaagatc attgat
//
LOCUS       DADMIB010000182         8125 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.184, whole genome shotgun sequence.
ACCESSION   DADMIB010000182 DADMIB010000000
VERSION     DADMIB010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8125
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.184"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(135..211)
                     /locus_tag="JNZ89_003764"
     tRNA            complement(135..211)
                     /locus_tag="JNZ89_003764"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(175..177),aa:Asp,seq:gtc)
     gene            complement(344..1075)
                     /gene="dnaQ"
                     /locus_tag="JNZ89_003765"
     CDS             complement(344..1075)
                     /gene="dnaQ"
                     /locus_tag="JNZ89_003765"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HAY8937492.1"
                     /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT
                     GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF
                     DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
                     LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT
                     DEELAAHEARLDLVEKKGGSCLWRA"
     gene            1140..1607
                     /gene="rnhA"
                     /locus_tag="JNZ89_003766"
     CDS             1140..1607
                     /gene="rnhA"
                     /locus_tag="JNZ89_003766"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HAY8937493.1"
                     /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN
                     NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD
                     LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV"
     gene            complement(1604..2326)
                     /locus_tag="JNZ89_003767"
     CDS             complement(1604..2326)
                     /locus_tag="JNZ89_003767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308236.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HAY8937494.1"
                     /translation="MKPARVPQTVVAPDRWGDLPWGELYRKALERQLNPWFTKMYGFH
                     LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW
                     CTDPHRLLRETDRVLIDDGWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQL
                     DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ
                     SKNKPRIRQAVGATRQCRKPQA"
     gene            2360..3115
                     /gene="gloB"
                     /locus_tag="JNZ89_003768"
     CDS             2360..3115
                     /gene="gloB"
                     /locus_tag="JNZ89_003768"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HAY8937495.1"
                     /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW
                     QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF
                     SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTL
                     VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR
                     TEDIDLINVINEETLLQQPEERFAWLRSKKDRF"
     gene            3187..4545
                     /gene="mltD"
                     /locus_tag="JNZ89_003769"
     CDS             3187..4545
                     /gene="mltD"
                     /locus_tag="JNZ89_003769"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase D"
                     /protein_id="HAY8937496.1"
                     /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA
                     RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM
                     YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
                     DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF
                     WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD
                     MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRDSLASGEIAAVQSTLVAD
                     NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR
                     LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP
                     DS"
     gene            complement(4594..5217)
                     /locus_tag="JNZ89_003770"
     CDS             complement(4594..5217)
                     /locus_tag="JNZ89_003770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HAY8937497.1"
                     /translation="MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKN
                     ITTRQGYAASLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP
                     GHPVRDIWLQAVEALRDTSHVRNYASGAWLTLINEANLIVDNLITDKLPLEFSSWVVR
                     MRTPEALVDAIRIYQQSASTEVRTYFSLQTDGSFTSDIIMVEAHKAA"
     gene            complement(5221..6021)
                     /locus_tag="JNZ89_003771"
     CDS             complement(5221..6021)
                     /locus_tag="JNZ89_003771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HAY8937498.1"
                     /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPPGEPLSTEERI
                     RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
                     LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF
                     SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD
                     DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK"
     gene            6262..7176
                     /locus_tag="JNZ89_003772"
     CDS             6262..7176
                     /locus_tag="JNZ89_003772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8937499.1"
                     /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
                     LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP
                     VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRARPLF
                     NSYRKIIASPDYISRYGKPETIDDLKQHVCLGFTEPASLNTWPIACSDGQLHEVKYGL
                     SSNSGETLKQLCLSGNGIACLSDYMIDREIARGELVELMADKVLPVEMPFSAVYYSDR
                     AVSTRIRAFIDFLSEHVKTAPGGAVREA"
     gene            complement(7173..7940)
                     /gene="dkgB"
                     /locus_tag="JNZ89_003773"
     CDS             complement(7173..7940)
                     /gene="dkgB"
                     /locus_tag="JNZ89_003773"
                     /EC_number="1.1.1.346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
                     /protein_id="HAY8937500.1"
                     /translation="MKDYVVISSVKTALELGYRAIDTAQIYDNEAAVGQAIAESGVPR
                     HELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEGVMQAL
                     LEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHG
                     IHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLES
                     NLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD"
BASE COUNT         2176 a         1950 c         1966 g         2033 t
ORIGIN      
        1 tggtctacca tatgtgatta acacatttac agcataacaa aaccatagac cgaagaaata
       61 gcgggattta aatgcaaaaa aaccgcaaaa ttaaaaatct tgcggttctc tgaactcatt
      121 ttcatgagtg aatttggcgg aacggacggg actcgaaccc gcgaccccct gcgtgacagg
      181 caggtattct aaccgactga actaccgctc cgcgttgtgt tccgttggga acgaggcgaa
      241 tattacggat tgcctcaccc ttcgtcaacg gtttttctca tcttttgaat cgtttgctgc
      301 aaaaatcgcc caagccgcta tttttagcgc cttttacagg tatttatgcc cgccagaggc
      361 agcttccgcc cttcttctcc accagatcaa gacgggcttc atgagctgca agctcttcat
      421 ctgtcgcaaa aacaacgcgt aacttacttg cctgacgtac aatgcgctga attgttgctt
      481 caccttgttg ctgctgtgtc tctccttcca tcgcaaaagc catcgacgtt tgaccaccgg
      541 tcatcgccag ataaacttcc gcaaggatct gtgcatcgag taatgccccg tgtagcgttc
      601 gtttactgtt atctatttcg tagcgggcac ataacgcatc gaggctgttg cgcttaccag
      661 gaaacatttt cctcgccacc gcaaggctat cggtgacctt acagaaggta ttggtcttcg
      721 gaatatcgcg cttaagcaac gaaaactcgt agtccataaa gccgatatcg aacgctgcgt
      781 tatggatcac caactccgcg ccgcggatat agtccatgaa ctcatcggct acttcggcaa
      841 acgtgggctt atcgagcaaa aattcatcgg caataccatg tacgccaaag gcttccggat
      901 ccaccagccg atcgggtttg agataaacat ggaagttatt gcccgtcagg cgacggttca
      961 ccacttcaac ggcaccaatc tcaatgatct tgtggccttc atagtgcgca ccaatctggt
     1021 tcataccggt ggtttcggta tcgagaacga tctggcgtgt aattgcagtg ctcatagcgg
     1081 tcatttatgt cagacttatc gttttacagt tcgattcaat tacaggaagt ctaccagaga
     1141 tgcttaaaca ggtagaaatt ttcaccgatg gttcgtgtct gggcaatcca ggacctgggg
     1201 gttacggcgc tattttacgc tatcgcggac gcgagaaaac ctttagcgca ggctataccc
     1261 gcaccaccaa caaccgtatg gagttgatgg ccgctattgt cgcgctggag gcgttaaaag
     1321 aacattgcga agtcattttg agtaccgaca gccagtatgt ccgccagggt atcacccagt
     1381 ggatccataa ctggaaaaaa cgtggctgga aaaccgcaga caaaaaacca gtaaaaaatg
     1441 tcgatctctg gcaacgtctt gatgctgccc tagggcaaca tcaaatcaaa tgggaatggg
     1501 ttaaaggcca tgccggacac ccggaaaacg aacgctgtga tgaactggct cgtgctgcgg
     1561 caatgaatcc cacactggaa gatacgggct accaagtcga agtttaagct tgtggtttac
     1621 gacattgccg ggtggctcca accgcttggc gaattcgtgg cttgttttta ctctgtttca
     1681 tcgggtttag cgttaaagga atagtccgtt tccgggcaac aataagttgt aagcaaccaa
     1741 gcgcaggaat atgcgcattc aatagttttc ctccgtgttt gttccacggg agaacgtgga
     1801 aacggctggc gtgcagcact tcaaaattca acaaagagag ccagtccagt tgccgcatca
     1861 gagtaaacat ccggctgtta tagggcgagg tttttcgcaa taccggcaca agtttgcgta
     1921 atcccattaa actaatggga ttgaagccac taatcaccag ccagccatca tcaatcaata
     1981 cccgatcggt ttcacgcaat aaacgatgcg gatcggtgca ccacggcaat gtatgtgcca
     2041 gtagacaaac atcaacggat ttatcggcaa aaggaagatg aagtggatcc gcctgcacct
     2101 ggacgggcat tccttgcgca gaaacattca cttgatgaga aaccgcgcac gcttcgcaat
     2161 tgatttctgc gcttaaattg ccaatcttaa gcagatgaaa accatacatt ttagtgaacc
     2221 atgggttgag ctggcgctcc agcgccttgc gataaagctc tccccagggc aaatcgcccc
     2281 agcgatcagg agccacgaca gtttgaggga ctcttgccgg tttcatcaca accttccgtt
     2341 tcacactaag aggtaatcta tgaatcttaa cagtattccc gcctttgatg acaattacat
     2401 ctgggttttg aatgatgaag caggtcgctg cctgattgtc gatcccggag acgcagagcc
     2461 agtattaaac gccattgccg ccaataactg gcaaccggag gccatatttc tcacccacca
     2521 tcatcacgat cacgttggcg gcgtaaaaga actggtggaa aagtttccgc aaattgtggt
     2581 gtatggtcca caagagacac aagataaggg aacaacacag gtagtcaaag atggcgaaac
     2641 tgccttcgtt ttggggcatg aatttagtgt aattgccaca ccgggtcaca ctttaggaca
     2701 tatctgttac ttcagtaaac cttatctatt ttgcggcgac acgctgtttt ctggtgggtg
     2761 tggtaggttg tttgaaggga cagcatcaca aatgtatcaa tcacttaata agttaagtgc
     2821 gttacctgac gatacattgg tatgttgtgc tcatgaatat acgttatcaa atatgaagtt
     2881 tgctttgagt attcttccgc acgatttgtc cataaatgat tattatcgta aagttaagga
     2941 gttacgggca aaaaatcaaa taacactacc cgtaattctg aaaaatgagc ggcaaattaa
     3001 tgttttttta agaacggaag atattgattt aattaatgta attaatgaag aaacattatt
     3061 gcaacaacct gaagagcgtt ttgcatggtt aaggtcaaag aaagataggt tctgataaaa
     3121 ctttcttgtc atcggctccg ttcgccgtta tgatcggtcg tcttttaagc aactattgac
     3181 acacacatga aggcaaaagc gatattactc gcctctgtcc tgctcgtggg ttgccagagt
     3241 accggcaacg ttcaacagca cgcacagagc ctttctgcag ctggtcaagg ggaagcagca
     3301 aagtttacaa gtcaggcacg atggatggac gatgggacgt ctatcgcgcc agatggtgac
     3361 ttgtgggctt tcattggcga cgagctaaag atgggaattc cggaaaatga ccggattcgc
     3421 gaacagaaac agaaatattt acgcaataag agctatctcc acgatgtaac tttacgggca
     3481 gagccgtata tgtactggat agcagggcaa gttaaaaaac gtaacatgcc tatggaactg
     3541 gtactactac ccatagtgga gagcgctttt gatcctcacg caacgtctgg cgccaatgcc
     3601 gcaggcatct ggcagatcat tccgagcacg gggcgcaatt atggtttgaa acagacccgc
     3661 aattatgacg cgcgtcgcga tgttgttgct tcaacaactg ccgcgctgaa catgatgcag
     3721 cgtctgaaca agatgtttga cggcgactgg cttctgaccg tagcggctta taacagcggc
     3781 gaaggtcggg tcatgaaggc aattaaaacg aacaaagcgc gtgggaaatc cacggacttc
     3841 tggtcgttac cgttgccgca ggaaacgaag cagtacgtgc ctaaaatgct ggcattgagt
     3901 gatattctca aaaacagcaa gcgttatggc gtacgtctgc caacgaccga tgaaagccgt
     3961 gctctggcgc gtgtgcacct gagcagcccg gttgaaatgg cgaaggttgc agatatggcg
     4021 gggatttccg tcagcaagct gaagacattc aacgctggcg taaaaggctc cacgctgggc
     4081 gcaagtggcc cgcagtacgt gatggtgcca aagaagcatg cagatcaact gcgtgattct
     4141 ctcgcttcag gcgaaattgc tgctgtacag tcgacgctgg ttgccgacaa tacgccgctt
     4201 aacagccgtg tttacaccgt acgctctggc gacacgcttt caagcatcgc ttcacgtctc
     4261 ggcgtaagca ccaaagattt gcagcagtgg aacaaactgc gcggatctaa gctgaagcca
     4321 ggccaaagtt tgacgattgg tgcaggcagt agcgcacagc ggttggcaaa caacagcgat
     4381 agcattacgt atcgtgtgcg caaaggcgat tcgctttcaa gcattgctaa acgccacggc
     4441 gtgaacatca aagatgtgat gcgctggaac agtgacactg cgaatctgca accaggcgat
     4501 aagctgacgt tgtttgtgaa aaacaacaac atgccagatt cctgacaaac cagataataa
     4561 aaaaggcacc gattcccccg gtgccttttt tatttatgcc gctttatgcg cttctaccat
     4621 gatgatatca ctggtgaaag agccatcagt ctgcaaggaa aaatacgttc tcacctctgt
     4681 cgatgcgctc tgttggtaaa tgcgaatagc gtctactaac gcttctggcg tacgcattct
     4741 cacgacccat gaagaaaatt ccagcggtaa cttatctgta attaaattat caactatcag
     4801 attggcttca ttgattaacg tcaaccacgc accgctggcg tagtttcgta cgtgagaggt
     4861 atcgcgtaat gcttctaccg cctgtaacca gatgtcgcgc actgggtgac ccggagacat
     4921 tacatccatc acaatcagcc taccgccagg tttcaatatc ctattcactt ctcgcagtgc
     4981 tgcaccaaca tcatgccagt gatgggcaga ataacggctg ataacaatat caaatgcgtt
     5041 atcggcaaat ggcagacttg cggcatatcc ctggcgggtg gtgatatttt tcagttgccg
     5101 ggcttcggca gcttgtgcca caacatccag catgtgggcc gataagtcat acgccaccac
     5161 cgcgctcacg ttttgcgcag cgccaaacgt tggtctgccc tgtggcagac ctgacatacc
     5221 ttatttatca ggcttgccgg gactgaattc aacgagtagc ggattgtgat cggaagcgcg
     5281 cgtaaccagt acagaagctt cactgacgtt cagaccacgg tagaaaacaa aatcgagcgg
     5341 gcgaccaaac gcccgacggc gctgatcatc ggtaaaacgc acctggcgca gcgacatttc
     5401 ccgcgcaaag cgatataacg cgttcatcct tctacggctc caggcattga aatctcccgc
     5461 cataatgacc gggccgctgt ggtgagctat ctgatcacca ataggaagta actgcttact
     5521 atagacatcc acgcccagac tgaagttgac ggcgtgtata ttaaccacca tcaacaggcg
     5581 ggtgtcaggt aatggataga ccgtcaccag tgccgacttc gccagacgca aaatgggttc
     5641 tcgttcacgt aacgggcagc aatacactgg atgtgccgcc gaaagggtca ttacgccaga
     5701 aggatgttgt ggcagcacga aagcgggtac ctgatcggcg gcaagatagt tagcggtcgc
     5761 aaactgtact aactctggcg ttgtctgcgc ttcctgcaat aacaccaggt gtgcatcttt
     5821 gccgtagttc tttaataccg acaaccattc agcgcgttgc tgtttgtata tgttccacac
     5881 caggatccga atacgctctt cggtacttaa cggttcccca ggtggtaatg cctggccgat
     5941 gctcgcaaaa gaccccggcg gtaagatcct ttccgcaggt tgtccggcaa catagcgcat
     6001 ggcataggtg ttttttcgca cttttgactt tgaaacctct attacgtcaa cccttccgca
     6061 ctcgggaggg ttctactatt atagggattt tagctcactc tttcaacgag caattgtata
     6121 ttgttatgta agcaagtgct tacaccggtc agaattttgc tcattatgga gaacattaaa
     6181 tcgcatgaca tatcacgcat cctgatggtt taatgacaaa taaattcaaa atatctcttc
     6241 tattttgcaa caggagcaaa aatgaaagcc acgtcggaag aactcgccat ttttgtttcg
     6301 gtcgtcgaaa gcggcagctt tagccgggca gcggaacaat tagggcaagc aaactcagcg
     6361 gtaagccggg cggtgaaaaa gctggagatg aaacttggcg ttagcctgct taatcggacc
     6421 acgcgacaac ttagcctgac ggaagaaggc gagcgttatt ttcgtcgcgt acagtcaatt
     6481 ttgcaggaga tggcagcggc agaatcagaa attatggaga cgcgtaatac accgcgtgga
     6541 ctgttacgga tcgatgccgc aactccagtg gtgctgcact ttctgatgcc gttaattaag
     6601 cctttccgtg aacgctatcc ggaagtcact ttgtcactag tctcctccga aacgattatt
     6661 aatttgatcg aaagaaaagt ggatgtcgcg atacgcgctg gtacgttaac ggattccagc
     6721 ttacgtgcca ggccgttatt taacagttat cgaaaaatta tcgcctcccc cgattatatt
     6781 tcccgctacg ggaagccaga aacgatcgac gatttaaagc aacatgtttg cctgggattc
     6841 actgaacccg cttccctcaa tacctggccg atagcctgta gtgatggaca attacatgag
     6901 gtgaaatacg gtttgtcatc caatagtggg gaaacactga aacagctttg cctgagtggc
     6961 aacgggattg cgtgtttgtc cgactacatg atcgacagag aaatcgctcg cggagaattg
     7021 gtggagttaa tggcagataa agtgttgcca gtggaaatgc cattcagtgc cgtctattac
     7081 agcgaccgtg cggtaagtac gcgcatccgg gcttttatcg atttccttag cgagcatgta
     7141 aaaacagctc ccggaggagc tgtcagagag gcttaatccc attcaggagc cagaccttcc
     7201 gggctaacca ggcggtcgtt gcaatccagt gcggcgatcg cttttttatc ttcggcatca
     7261 agctgtaaat tttgtgcctt aagattactt tccaggtttt tacgtttagt agaagaagga
     7321 attactgagt aaccttcccc catagcccac gccagaatca cttgtgccgg agtcgcattg
     7381 tgtttagctg cgatacgagc aataacctca tctttcaggg ccttaccata cgccagcgtc
     7441 atataggaag taatatgtat gccgtgctgt ttagcccagg caaccacttt acggttttgc
     7501 agataaggag agagttcaat ctggttagta gcgatgtttt cagcgccaac agcagcaatc
     7561 gccttttcca tcaatgggat cgtgaagttg gaaataccga tctcacgcgt cagcccttgt
     7621 tttttggctt ccagcagcgc ctgcataacc ccttcaacag agacttcatc gtttggtgac
     7681 ggccagtgga ttagcgtcag atcaacataa tcggtacgca atttttgcag gctctctttc
     7741 agacttggga tcaatttgtc tttgctgaga ttttcaatcc agattttagt ggtgatgtag
     7801 agttcatgac gtggcacgcc actttctgca atcgcctgac ctactgcggc ttcgttatca
     7861 tagatttgtg cggtatcaat tgcgcgataa ccaagttcaa gcgccgtttt cacagatgaa
     7921 ataacaacgt agtctttcaa cctaaaccaa atgcagggat agccataata tgcctctttt
     7981 aatgctattt tcgttaactg aggtgattat gggcttcaga ctgttgagga aaaaagcgta
     8041 aaatgcagag gatttttgcg attctggcaa taatagatat acagacgaaa aaaaacctcg
     8101 agcgttaact cgaggcttct taata
//
LOCUS       DADMIB010000183         7864 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.185, whole genome shotgun sequence.
ACCESSION   DADMIB010000183 DADMIB010000000
VERSION     DADMIB010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7864
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.185"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(496..858)
                     /locus_tag="JNZ89_003774"
     CDS             complement(496..858)
                     /locus_tag="JNZ89_003774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibL family ribosome-associated protein"
                     /protein_id="HAY8937501.1"
                     /translation="MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKAT
                     LEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTA
                     LGREMGLQEMTGFSKTAF"
     gene            1143..1352
                     /locus_tag="JNZ89_003775"
     CDS             1143..1352
                     /locus_tag="JNZ89_003775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937502.1"
                     /translation="MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPD
                     ESVPLYLQRLEYYRRLYRPKQVEGQ"
     gene            complement(1364..1951)
                     /gene="mtlR"
                     /locus_tag="JNZ89_003776"
     CDS             complement(1364..1951)
                     /gene="mtlR"
                     /locus_tag="JNZ89_003776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor MtlR"
                     /protein_id="HAY8937503.1"
                     /translation="MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRS
                     FLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVI
                     NRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSL
                     YAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK"
     gene            complement(1951..3099)
                     /gene="mtlD"
                     /locus_tag="JNZ89_003777"
     CDS             complement(1951..3099)
                     /gene="mtlD"
                     /locus_tag="JNZ89_003777"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709374.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HAY8937504.1"
                     /translation="MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARH
                     SYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKG
                     LVKRKEQGNESPLNIIACENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRI
                     VPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPSMELTDNLMAFVERKLFTLNT
                     GHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQK
                     ILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYSLPHKNLIQGIAGAMHF
                     RSEDDPQAQELAALIADKGPQAALAQISGLDANSEVVSEAVTAYKAMQ"
     gene            complement(3329..5242)
                     /locus_tag="JNZ89_003778"
     CDS             complement(3329..5242)
                     /locus_tag="JNZ89_003778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HAY8937505.1"
                     /translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLT
                     NETLAKLVGPMITYLLPLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
                     AGPLGGWCIKHFDRWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKM
                     LAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIE
                     ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
                     GMTGVFTLTILGGGLVSPASPGSILAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILL
                     KTSKVKEEDDIEAATRRMQDMKAESKGTSPLSAGDVTNDLSHVRKIIVACDAGMGSSA
                     MGAGVLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
                     NFLDSGLYTSLTERLVAAQRHTENEVKVKDSLKDSFDDSSANLFKLGAENIFLGRKAA
                     TKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKT
                     GVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTT
                     SVDEVLELLAGRK"
     gene            5779..6141
                     /locus_tag="JNZ89_003779"
     CDS             5779..6141
                     /locus_tag="JNZ89_003779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HAY8937506.1"
                     /translation="MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAI
                     HTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIASLSDRISRL
                     EHQLAAEKKTDYSTFPEI"
     gene            6144..7280
                     /locus_tag="JNZ89_003780"
     CDS             6144..7280
                     /locus_tag="JNZ89_003780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY8937507.1"
                     /translation="MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLI
                     LLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQAR
                     VDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFS
                     ERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLE
                     QTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGD
                     DAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGGLQSLTVVPGTDGVQGTIELDPND
                     DIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH"
BASE COUNT         1964 a         1909 c         1903 g         2088 t
ORIGIN      
        1 gtccattgta ttattggtga tttatgttgc tttacattaa tgacagtgat gtgtgtcgat
       61 taaatattgt tttaagcatt catcataaaa atgtatcatt cgtttcaaaa gatgtctgtg
      121 tttgtatgaa tatattattt tcgtggattc taatgatgat tattaataaa tgtcaaatat
      181 gaaagaaacc atgtctggga aaaaatttac agataattta ttgtatgaat atgatgatta
      241 aaatttcaca attaaatccg aaaaaaagag acgtaactgc ttgttaatta ataaatgata
      301 tcttctatat atttttattg tttataggtg gctatttcgg taaaaatgca ttttcagaat
      361 atcaaccagc ggtaaatcga cgtaaaggga gtgaattgtt tggtaattag gcgagtagac
      421 aggagagtcc ccgcattgac cagctaaggc aagccagatg cgggttgata tgatcgaacc
      481 agtcgtctga ggcgcttaaa acgcagtctt agagaatcca gtcatctcct gcaggcccat
      541 ttcacggccc agcgcggtca ttgggtgcac aaccaccagt ccgcgaacac ttttcttcag
      601 cttgcccata tcagcctgct cttttttggt aattgcgcgc tgaaacggca tcttcatcag
      661 cttctgtgct tctttactca gtttttggct atgaacctca cgcaggcgag caatttctgc
      721 ttccagcgtg gctttctctt tttccagctc ggcatatttg tctgcggctt caaccagcga
      781 cagatcggcc tgctggtggc ggatggcgtc caggcgatcg ctgagacgtt tgatttcgtt
      841 tttttcgact tctttcatgt gatggcttct gataaagata aatttatagc ccctagtatg
      901 cgcgaccagg tgctttgttc acaactgatg acattgtaat agttctgcaa cgtaatcatt
      961 aacatgctca aaaactacgc aattcgttga ttaattaaga aatctataga aaaaagataa
     1021 taaacagcag cggatgatta ttgaggattc agcacgtttt ccttaatgtc atctttaccg
     1081 ggaacctaaa ctaaaattgg tggccgcgca ttcccggcgc ggggtaatac ggagatatca
     1141 tcatgggcaa attaggtgaa aacgttccgc ttcttatcga taaagccgta gatttcatgg
     1201 catcaagcca ggcgttccgg gagtatctga aaaaacttcc tccccgtaac gcgattccgt
     1261 ccggaatacc cgatgaaagc gtgccgttat atctacaacg tctggagtat tatcgtcggc
     1321 tttatcggcc gaagcaggta gaggggcagt aagcagacgt tgcttacttt tgaaaggctt
     1381 tttttaagct gattttggaa atcagctcag tcagtgaaag gaccattgtt gatcgcacag
     1441 cctgttgata gcgctgaatt tgcattgcat acaaactgga gtctgctggt tcaaactgtg
     1501 gcggcggtgg taacgccgcc acgcagtgca gttcaccaaa gggtccaagg atttcgtcgt
     1561 cggtaaaggc gtactcgttg ccgtcgtgat ttagctcttc acgcaatgcc atcagcagtt
     1621 ccgcatcttc gtattcctgg cggttaatga cgcccaaccc gtaaatgagt tttaaacgca
     1681 cagaaagatc gcccagcgga ccgtcgccgt cgagtaacgg ttctacagca tacttcaccg
     1741 cgtaatcgtc tttgcggaat acctgaagca ccagaagatt taccgcctcg gtcaaaagct
     1801 cgacggcggt gatcagaaag cttcgcacgg ttttgccagc attcagacgc tcaagcacac
     1861 ggttttcaaa ggcctgggtt tgttccattg ttgcctgcat atctgacaat ctgttattcg
     1921 ggcgcagggt gtcctgcgcc tggtccacca ttattgcatt gctttataag cggttaccgc
     1981 ctcggataca acctcactgt tggcatcaag accggaaatc tgtgccagcg ccgcctgcgg
     2041 acctttgtca gcgatcagtg ctgccagttc ctgagcctgc ggatcatctt cactgcggaa
     2101 gtgcattgca ccagcaatcc cctgaatcag attcttgtgc ggaaggctgt attccagcgt
     2161 accgagcagt ggcttgatca gacggtcgcc agcactcagt ttacgcagcg gctgacggcc
     2221 tacgcgctct acatcatctt tcagatacgg gttctcaaaa cgaccgagga ttttctggat
     2281 gtacgccgca tgtttgtctg cgtcaaagcc gtagcgcttg atcagtaccg caccactttc
     2341 ttccatcgca ccttttacca ccgcgcggat tttctcgtcg agaatagcgt cacgaatggt
     2401 ctgatgaccg gccagttttc cgaggtacgc ggttatagca tgacccgtgt tcagggtgaa
     2461 gagtttacgt tcgacaaatg ccatcaggtt gtcggttaac tccatgcttg ggatgttcgg
     2521 cagtgcgcct ttgaactgcg ttttatcgac aatccattcg ctgaaagttt ctaccgtcac
     2581 ttccagcgga tcgttagttg ccgaagccga aggcggtacg atgcggtcaa cggcggaatc
     2641 gacaaagcca acgtgttctt ctacccacgc tttggcgtct tccggcaggg cgttcatcac
     2701 atggcctttc agctgcgtgg taccgcgtac catgttttca caggcgatga tgttcagcgg
     2761 ggattcatta ccttgttctt tgcgtttcac cagccctttg gcgatagccg gagcaatacg
     2821 ttccagcaca accgggccaa cggcggtagt gactaaatcg acctgagcaa tcagatcaac
     2881 gacatcatca ccaatgctgc tgacagcatt gacgccggaa acggtatcta cctgctcggt
     2941 ttcaccaacc acatgaacct gatagctatg acgggcattc agggcatcaa gtaccacctg
     3001 attgacatcg gcaaacgtca gttggatacc cgcgtctgcc agcagtttac cgataaagcc
     3061 acgaccgata ttacctgcgc caaaatgtaa tgctttcata gtattaacct tcatcaatgt
     3121 ttttacccga gagggctggg gtgaggcttt tccctcaccc aaaccctctc cgtgaggaga
     3181 ggggcagcgc cggatgcggc gtaagcgcct tatccggcct acaagaacgt gcaaattcaa
     3241 caaatcgtga tgcatcctgt aggcctgata agcgtagcgc atcaggcaat taaccccacc
     3301 ttctccatgt ggagagggtg ggattggatt acttacgacc tgccaacagt tccagcactt
     3361 catccacgct ggtggtgtgt gccagacgct cgatgacgga ctcatcatcc agtgcattgg
     3421 tcaggctggt gataacctga atgtgctcgt tgttacgggc tgcaatacca atcaccagac
     3481 gggcaatgtc atcttcctct tcaccgaagc gcacgccttc cgggtactgg cagaacacca
     3541 cgcccgtttt cagtacgcga tctttcgctt caaccgtacc gtgtggcacc gcgatagact
     3601 cacccagata agtcggggtc agtttttcac gatccagcat cgcctgaacg tattccggct
     3661 caacgtaacc gcctttcacc agctgctcgc cagcaaaacg aatcgcttct tctttggttg
     3721 ctgctttgcg accgaggaag atgttctccg cgcccagttt gaacaggtta gcactggaat
     3781 cgtcaaagct gtctttcaga ctgtctttca ctttcacttc gttttcagta tggcgctggg
     3841 cagcaaccag acgttcggtt aggctggtgt acaggccgct gtcgaggaag ttggtcagcg
     3901 aaatatgctg tgcctgcgga acctggcgca tagcgcgttc ggtcaggtca cggtgagtga
     3961 tgacgaggtc cacatctggc ggcaggttgt tgatcgcgct gttagtgacc gaaatctgcg
     4021 acagacctgc atcctgaatt ttcttacgca gcacgcctgc gcccatcgca cttgaaccca
     4081 taccggcatc acaggcaacg atgattttac gtacgtggct caggtcgtta gtcacatcgc
     4141 ccgcagacag cggagatgtg cctttagact cagctttcat gtcctgcata cgacgagttg
     4201 ctgcttcaat atcatcttct tctttcactt tgctggtttt cagcaaaata gcagagacaa
     4261 cgaaggagac agccatcgcc gcacacacac ccgcgatgtt agcgaaataa gccccttttg
     4321 gtgtcatcgc cagtacagca aggatagaac ccggagatgc cggagaaacc agaccaccgc
     4381 ccaggatagt cagcgtgaac acgccagtca taccgccgag gatgactgcg aggatcagac
     4441 gcggattcat cagcacatac gggaagtaga tttcgtggat accacccagg aagtggatga
     4501 ttgccgcacc gcccgcagac tgtttagcgc taccacgacc aaagaacatg tacgccagca
     4561 gcacgcccat acctggacct gggttagctt caatcaggaa gaagattgat ttacccagtt
     4621 catgggactg ctgaataccc agcggcgaga agataccgtg gttaatggcg ttgttgagga
     4681 acaggatttt cgccggctca acaaagatag acgccagcgg cagcatgtca tggacaacca
     4741 tgaagttaac gcccgcagcc agcattttgg acagggcttc aacaatcggg ccaatgccga
     4801 ggaatgccag aatagcgagg atcatcccga tgatgcctgc ggagaagtta ttcaccagca
     4861 tctcaaaacc ggatttgatc ttaccgtcta cccagcggtc gaagtgctta atgcaccagc
     4921 cgcccagcgg acctgcaatc atagaaccga ggaacatcgg catgtctgcg ccgacgataa
     4981 cgcccatggt ggtgatggca ccgactacgc cgccacgttc gccgcctacc agcttaccac
     5041 cggtataacc gatcagcagc ggcaggagat aagtgatcat cggcccgacc agcttcgcca
     5101 gcgtctcgtt cgttaaccac cctgttggaa taaataacgc ggtgatgata ccccacgcga
     5161 taaacgcgcc gatatttggc atcaccatgt tgctgaggaa acgaccaaag ctttgcactt
     5221 tgatcttaat atcggatgac ataaaaacac cccttcttat gtttgctgtc gcgcaggctg
     5281 gaagcccgag gttttttgtt aatgtggcgg cagaggtagc cggaccttgt agatactgcg
     5341 aaatctggca ctgaatcggt taactgtcca gtcgacggcc ttttgtgtga tattaatcac
     5401 ataaatatag gaggtagaga ggtaattgac gtgacgttca tcacaaaacg cttgtgtaaa
     5461 aaagcaacaa ggcggcgatt ttcgctaaaa atggcattta aatgtgagta gtgtcacatt
     5521 tttgttttga tggtttgttg aatctttgtg atctgaatca caagatattt tcttacggcg
     5581 ttcacctgat gtgatctaca gcatgttatg ccttcgtcat acaatcgtta tgtaactaag
     5641 caactcatca cctctaaaaa ttattctttg gtgttatggc gagaatcgcg aacccggatt
     5701 attgtcaaaa tatcagcctg actcccttct ggctgccagc ccaaaaacaa cactgataaa
     5761 cgtgaatccg aggcagatat gtttctaaac tatttcgcgt tgggagtgct gatcttcgtc
     5821 tttctggtga ttttttatgg aatcatcgcg atacatgaca tcccttatct gattgccaaa
     5881 aagcgcaatc acccccatgc cgacgctatt catacggcgg gctgggtgag cctgtttact
     5941 ctgcatgtta tctggccgtt tctgtggatc tgggcgacgc tctatcaacc ggagcgtggc
     6001 tggggtatgc agtcacatgt tgcgtcgcag gagaaagcga ctgacccgga aatcgcctca
     6061 ctttctgacc gaatttcccg gctggagcat caactcgccg ccgagaaaaa gactgactat
     6121 tccacgttcc cggagatcta attatggatc tattgattgt tttaacttac gtggcgctgg
     6181 cgtgggcggt ctttaaaatc ttccgcattc cggtaaatca gtggacgctg gcgacggcgg
     6241 cgctgggagg cgtgtttctg gtgagtggtt tgattttgtt gatgaactac aaccaccctt
     6301 acacttttac cgcgcaaaag gcagtgatag cgatccctat cacgccacag gtgacgggaa
     6361 ttgttactga agtcactgac aagaataatc agcttattca aaagggcgag gtgcttttta
     6421 agctcgaccc ggttcgttac caggcgcgag ttgacagact tcaggctgac ctgatgacgg
     6481 cgacgcataa tataaagacg ctgcgtgcgc agctcactga agcgcaggcc aacaccaccc
     6541 aggtttcagc ggagcgcgac cgtctgttta aaaattatca acgttacttg aaaggcagcc
     6601 aggcggcggt gaatccgttc tcggaacgtg acatcgacga tgcgcggcaa aatttcctcg
     6661 cgcaggatgc gctggtgaaa ggctcggtgg cggagcaggc gcagatccag agccagctcg
     6721 acagtatggt taacggcgag caatcgcaga ttgtgagctt aagagcgcaa cttactgaag
     6781 caaaatataa ccttgagcag actgtcattc gcgcgccgag caatggctac gttactcagg
     6841 tactgatccg cccaggtaca tacgcagctg ccttgccgct gcgtccggtg atggtcttca
     6901 tccccgagca aaaacggcaa attgtcgccc aatttcggca aaactcgctg ttacgtctga
     6961 aacccggcga tgatgcggaa gtggtgttta acgcgctacc tgggcaggtg tttcacggca
     7021 aactgactag tattttacct gtcgtgccag gcggttctta tcaggcgcag gggggattgc
     7081 aatcattaac ggtcgtgccc ggcacggacg gtgtgcaggg aaccattgaa ctggacccta
     7141 acgatgatat cgatgcctta cccgacggca tctacgccca ggtggcggtt tactccgacc
     7201 atttcagcca tgtttcggtg atgcggaaag tgctgctaag aatgaccagc tggatgcatt
     7261 atctttattt ggatcattga gggggagggg ggagattatg gaactttgct ccttgtaagg
     7321 actaattatt tttgcatatt acttcattag ctgcgatgat ttttctttaa tattcattat
     7381 gttaataagt tctggatgag tgtgctctca ttggattttt tatccgtctt gttctgccgc
     7441 aggatgagac tatacatcgt cgagatcgca atgatgatat gagttgttcc tcctgcgacg
     7501 gctctaatca aaaaagagca ggagtgcttt tccatctatt gcgatgatgg ctttattatc
     7561 tgaaggatga cagtcacatt taaaaaatat ttaatctata gatcacaatg tagggtcatg
     7621 gaatatatgt atacaactat tttcttcttc acttttaatt atcgtattca ttataaaact
     7681 aagttaaaaa aactcctgga gagtgagtta ttaatatatt tttaaataaa attaagttat
     7741 cattcatcga tgcattttat agaatcatca atggccataa tagtactatt aactctcaat
     7801 tttatatttt tatcatcact acaaatatta actgaattta tatcaatgat ttttttattc
     7861 ttat
//
LOCUS       DADMIB010000184         7818 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.186, whole genome shotgun sequence.
ACCESSION   DADMIB010000184 DADMIB010000000
VERSION     DADMIB010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7818
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.186"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            268..411
                     /locus_tag="JNZ89_003781"
     CDS             268..411
                     /locus_tag="JNZ89_003781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobF family protein"
                     /protein_id="HAY8937508.1"
                     /translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK
                     KTI"
     gene            424..633
                     /gene="cspE"
                     /locus_tag="JNZ89_003782"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             424..633
                     /gene="cspE"
                     /locus_tag="JNZ89_003782"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HAY8937509.1"
                     /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
                     AEGQNVEFEIQDGQKGPAAVNVTAI"
     gene            799..1608
                     /gene="rlmA"
                     /locus_tag="JNZ89_003783"
     CDS             799..1608
                     /gene="rlmA"
                     /locus_tag="JNZ89_003783"
                     /EC_number="2.1.1.187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(745)-N(1))-methyltransferase"
                     /protein_id="HAY8937510.1"
                     /translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR
                     SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHA
                     FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK
                     AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCY
                     PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY"
     gene            complement(1605..2171)
                     /gene="mntP"
                     /locus_tag="JNZ89_003784"
     CDS             complement(1605..2171)
                     /gene="mntP"
                     /locus_tag="JNZ89_003784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP"
                     /protein_id="HAY8937511.1"
                     /translation="MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG
                     AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRR
                     HGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
                     IIGKKAEILGGLVLIGIGVQILWTHFHG"
     gene            complement(2599..3057)
                     /locus_tag="JNZ89_003785"
     CDS             complement(2599..3057)
                     /locus_tag="JNZ89_003785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HAY8937512.1"
                     /translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGR
                     IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA
                     NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDNLERIYKLIVLTQ"
     gene            complement(3112..3963)
                     /locus_tag="JNZ89_003786"
     CDS             complement(3112..3963)
                     /locus_tag="JNZ89_003786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020804907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HAY8937513.1"
                     /translation="MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCF
                     SMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDG
                     AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
                     TRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSR
                     ITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY
                     ACGLLGL"
     gene            complement(3976..4776)
                     /locus_tag="JNZ89_003787"
     CDS             complement(3976..4776)
                     /locus_tag="JNZ89_003787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HAY8937514.1"
                     /translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG
                     DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL
                     AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL
                     SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
                     FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD"
     gene            complement(4839..5810)
                     /gene="manX"
                     /locus_tag="JNZ89_003788"
     CDS             complement(4839..5810)
                     /gene="manX"
                     /locus_tag="JNZ89_003788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HAY8937515.1"
                     /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
                     LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL
                     MARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND
                     YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA
                     HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ
                     VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK"
     gene            6273..>7818
                     /gene="yoaE"
                     /locus_tag="JNZ89_003789"
     CDS             6273..>7818
                     /gene="yoaE"
                     /locus_tag="JNZ89_003789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family cation transport protein YoaE"
                     /protein_id="HAY8937516.1"
                     /translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
                     KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT
                     TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
                     VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
                     GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDVDNPMPIPE
                     GAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPV
                     CRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS
                     FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQA
                     LDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKE
                     QPAHDED"
BASE COUNT         1987 a         1913 c         1940 g         1978 t
ORIGIN      
        1 gcactatgta ataacttctc ccactggcct ggaacaactg aacttattga actatgttag
       61 aaaatacgcc agtttaagta tctgcctgaa ctggcaaggt taagcacaat gatatatcgg
      121 cgcgtattcc gttgcataag tgtgcaaaaa aagtggaaga cgtatcgaga tttgtgcgtc
      181 tgatcgagac atgtttaaaa atggcttgcc ataattaacg ttgtatgtga taacagattt
      241 cgggttaaac gaggtacagt tctgtttatg tgtggcattt tcagtaaaga agtcctgagt
      301 aaacacgttg atgttgaata ccgcttctct gccgagcctt atattggtgc ctcatgcagt
      361 aatgtgtcag ttttatctat gttatgcctg cgggcgaaga aaacaatcta aggaattttt
      421 caaatggcaa agattaaagg tcaggttaag tggttcaacg agtctaaagg ttttggcttc
      481 attactccgg ctgatggcag caaagacgtg ttcgtacact tctccgctat ccagggtaat
      541 ggcttcaaaa ctctggctga aggtcagaac gttgagttcg aaattcagga cggccagaaa
      601 ggtccggcag ctgttaacgt aacagctatc tgatcgaatc cactgatctg aagtgtgaat
      661 acgcttcaat ctcgctataa agcctcgtcg aatgcgaggc tttttactat gctttatctt
      721 cgctcctggc gttcggatat ttgcccgccg cgtgattcgc gttacacttg cggcctttag
      781 tatcctgccg gagttgtcat gtctttttcc tgtccacttt gccatcagcc tctttcgcgt
      841 gaaaaaaaca gctatatctg tccccagcga catcagtttg atatggcgaa agaagggtat
      901 gtcaatctgc tgcccgttca gcataaacgg tctcgtgatc cgggcgacag cgcggaaatg
      961 atgcaagcac gccgcgcatt cttagatgcc ggacattatc agccgctgcg tgatgcaatt
     1021 gtcgcccaac tgagggaacg gcttgatgat aaggccacgg cggtgctgga tattggctgt
     1081 ggtgaagggt attacacaca cgcatttgcc gatgcgttgc ccgaaatcac cacgtttggt
     1141 ctggatgttt cgaaggtagc gataaaagcg gcggcgaaac gctatccgca ggtcactttt
     1201 tgtgtcgctt ccagccaccg tttgccgttt tccgatacca gtatggacgc cataatacgt
     1261 atttacgcgc cgtgtaaagc agaagaatta gcacgagtag tgaagcccgg cggctgggtc
     1321 attactgcca cgccgggacc gcgacatttg atggagctga aggggctgat ttacaatgaa
     1381 gtacatcttc atgcacctca tgcagaacaa ctggaaggtt ttacattaca gcagagtgcg
     1441 gagttgtgtt atccgatgcg tcttcgcggt gatgaagccg tcgcattatt gcagatgacg
     1501 ccgtttgcct ggcgtgcgaa gccagaagtc tggcaaacac tggcagcaaa agaagtgttc
     1561 gactgccaga cggactttaa tattcacctc tggcagcgtt cttattaacc gtggaagtgc
     1621 gtccagagga tctggacgcc gatgccgatc agtaccagcc cgccgagaat ttccgctttt
     1681 ttcccaataa ttgagccgat aaagcgacca accatcatcc ctaatgttga cataatcaag
     1741 gttgcacaac caatggccaa tgcggtcgcg ataatgttga cctgcaggaa agcaagacca
     1801 acacccacag ccatggcatc caggctggtg gcaatcgcgg tggttaccag tagccagaaa
     1861 ccgtgtcgac ggcgcggctc ttcatcttca tcatctgcgc cacgaaaacc ctcaataatc
     1921 attcgcccgc cgaggaatat cagcagcaca aacgcaatcc agtggttcca ttcaaggaca
     1981 aaccggctgg ctaacatgcc cattccccag ccgatcagcg gcgtcagggt ttcgacggca
     2041 ccaaaaataa ggccggttcg caatgcttca gaaaatttcg gtttatggag ggtggcacct
     2101 ttaccgattg atgcagcaaa tgcatccatc gacataccaa acgcaagaag aacagtagca
     2161 gtgatattca tgacaatgtc ctgaccgggg tatccataaa acacatcatc gcccccagca
     2221 aacatgcata catgaacaac aagccgtgat ggttttcgcg ttcatgcagg catagcgatt
     2281 gatgtgcata tggtctcgcc tgactgaaag tattcagtcc gtacgtgcca cgttttgcaa
     2341 cgagtatgtt gacacgtaca tttccggaat ctggaaatcg gctactcccc aaatgagggc
     2401 gcaaccttaa catattttga gaatataaaa caactgttgg aatatattat ttcattgctt
     2461 tattgataac gaattcattt agatttatat atcaatgaaa cgttaaaata aataacaaat
     2521 aagggaagag gtaatatagc ctaagctatg tctgattatt aaaaatacac taaacatagc
     2581 tttggctaaa ttcataactt attgagttaa aacgataagc ttataaattc tttccagatt
     2641 gtcgatattt cgaacgcgga ttaacagccg acgctgttct aattgcatca ccaacacgcc
     2701 atcttccgac aagttcatcg ctttgattcg gctatattca atccagacat tggcgaagaa
     2761 aaaacctttt tgtttaaaga tgatcttcgg aacgcggatc cagaatatat aaaaacccat
     2821 cagagccagt gcgcttaata accatgtcgt tattaatgca ccatgattcg tgacgttgtt
     2881 atagataaga atgacaatca atccgacgaa gataacgcta tcgatgcgac cacgccggag
     2941 caaaggaatt gccagcaggg tggggccgtt acggcggggc atgatgaact gatcgtagat
     3001 cgcgaaggcc aggagtgcgg cgatgaaaag aatcagtacc aggtccgtga ttgtcattaa
     3061 tcctccagat aaaaaaacgg ggccaaaagg ccccggtagt gtacaacagt cttacagtcc
     3121 cagcaggccg caagcgtaac cagcgatacc gatgacgaag aagccaacga tgatccacag
     3181 cgggttaact tttttgcgca gtagccacat acaagcaaag gtcagcagca gtggtaccag
     3241 gcctggcatt aactggtcca gaatagtctg gacagtagta acgtgttctt tgcccgtctg
     3301 gtcagtaatg cgagagacaa ccagcgggat gttgacatgt gtccacttgt taaccaatgc
     3361 ccccatgaca aacaggccga ggatagacgc cccttccgtc agtttttgca ggaagccacc
     3421 acccatatct ttaacgatat cgataccttt ggagtaacca tacgctacgc cgtagtaacg
     3481 ggttgccaga cgcaccaggt taaacaggat gaagaacagc agcggaccta acaggctgcc
     3541 gctcatcgcg ataccggcac ccagtgctgc aaataccgga cgtacggttc cccagaagat
     3601 cgggtcgcct acaccagcca gcggccccat caaaccgact ttgataccgt tgatagcacc
     3661 gtcgtcgatc tctgcgccat tagcacgctg ttcttccagc gccagggtta cgccgagaat
     3721 cggcgcagcc acgaacggct gggtgttaaa gaactccagg tgacggcgaa tagcttgttt
     3781 acgagcttcg ttgttctcag ggtagaggcg acgaattgcc ggtaccatag agaagcagaa
     3841 acccagtgcc tgcatacgtt cgaagttcca tgaaccctgg aagaggttag aacgcaggaa
     3901 gacgccacga atatcacttt gagtgagttt tttctcggtg gtagtttgag ttgtatcaac
     3961 catttcgctc acctgttagt ccagttcgtt atcgagatcg ttgttaccag cagcctgagc
     4021 aggcgcaccg gctacgcggt tgtatttcgg gctaagttgg atgtagagca ctgccataac
     4081 agtaccgatc acacccagag caaccaggtt aaagttggtg aatgctgcgg ttacgaagcc
     4141 gaggtagaag aacggcatca ggtagccagc acgcatcatg ttgataacca tcgcataacc
     4201 aaccaccacg atcatgccac cggcgatatt cagaccattg gtcaccactt ccggaatcgc
     4261 attcagcatg ttctgtactt cgctggtacc aacagacagc gcaacgatga cggccggaat
     4321 agccacacgc attgcttgca ggaacagaga agaaacgtgg atccaggaaa tcgctgtcag
     4381 gttgccgtta tcagcagcct tatccgcagc gtgctggaaa gcaacggtaa tagtacgaac
     4441 gatgatggtc agtacctggc ccgcagcggc cagagggatt gccagtgcga tacctgcacc
     4501 aatgctctga tgacctgcga taaccagaat ggtagaaatg atagaagcca gagcggcgtc
     4561 aggcgcaact gcagcaccga tgttcatcca gcccagcgcg atcatttcca gcgtaccacc
     4621 gataataata ccggttttca tatccccaag aacgataccc accagggtac acgcgattag
     4681 cggacggtga aactgaaatt catcgaggat tgatcccata cctgcgatac aggctacgat
     4741 aaataccagc acaatttgaa gagtggtaat ctccattgta cttctcctgt ttacgtaaga
     4801 cttaagtgtg aaaactgagt gataatcaac acaatacgtt acttatcgat tttgctgatc
     4861 agatccatca ttttcagttt cggatcggtg gaaaccttac ggacttccag ctcaataccg
     4921 cgcgcattca gtttcttgaa cgcctcgata tctttttcat caaccgaaac cgcgttattc
     4981 acctgggttt taccctgacg gaatgccata ccaccgacgt taacagaggt gattttcacg
     5041 ccgccttcaa cgagacgctc tacatctgtt gggttggtaa ataacagcat tacgcgttcg
     5101 ccagcatatt tcgggttgtt gtagacgcga atcattttgg caacatcaac tacgtgtgct
     5161 gttacgcccg gaggtgcaac ctgggtgagc agtgtcttac gaacggtatc cgcagccact
     5221 tcatcactaa caacaataat acgggagaca ttggtttctt tggtccagcg ggtggcgacc
     5281 tgaccgtgaa tcagacggtc gtcgatacgc gcaaggccaa taaccatgta gtcgtttggc
     5341 cccattggtt ttgccggagt tggagccgct tttggtgctg cggcagcggg tgctggcgcg
     5401 gctttttcaa ccggtttggc tttcagtgct ttcacacctt cacggcctgt ttctactgcc
     5461 agcgcaacca gttcatcaaa gcttgggtca tcatcacgag ccattaacgt ttccacgagc
     5521 attggaatgt taacgcctgc aatgacttca taatgctctt tgtcgacgac aatgcggctg
     5581 gcagcattga acgggctgcc tccccatgta tcaacgagaa acagcacgcc tttagtggtg
     5641 tcgagttttg ccaactgagc gttgtacttt tcaatcagcg tttcggcatt ttcacctgga
     5701 acgaaatcga tccagccgac gttttcctgc tcgcctaaca gcatttctgc cgttttaagc
     5761 aactgctctg cagcccaacc atgtgtgcct ataacaatag caatggtcac ttgctacctc
     5821 ctttattatc gttaacacct caacgtgcca gatgtatttt tgaatcgtcg tccacaatcg
     5881 aatcgattca gataagggct acaaccaaaa acccctgcgt ttcgcgattt attttagata
     5941 tcgaaaaaat tattttatgt gatgaagatc cgtaatttaa ctttcgatta gcagaaattt
     6001 cgaaaggtaa aatatccttg tcacattcgt ttgcaaagga aggtaaatct ttgccaaatc
     6061 agaggcgtct ctgatatgtt taactcccgt ttaacaacca tggagtatag ggcagtagcc
     6121 cgcagtatgg atcgtcaccg acgtcatttc agcatcaggc cttttaacgc ctgcctttct
     6181 ggcactctat gccgcacctt tcgtttgcat tttgtcgtta cgcctgcatt atttctggcg
     6241 tcgaatagct attccttaag caggagcttg tcatggaatt cttaatggac ccctcaattt
     6301 gggcggggct actcacgctt gttgttctcg aaattgtgct gggtatcgat aacctggtct
     6361 tcatcgccat tcttgctgac aaactgccgc caaaacaacg cgataaagcg cgtttgctgg
     6421 ggttatcact ggcgctgatt atgcgtctgg ggctgctgtc gctgatttca tggatggtca
     6481 cgctgaccaa accgctattt accgtcatgg atttctcctt ctccggacgc gacctgatta
     6541 tgttgttcgg ggggatattc ttgctgttca aagcaacaac cgaactgcat gaacggctgg
     6601 aaaaccgcga tcatgattcc ggccacggta aaggctacgc cagtttctgg gtggtcgtca
     6661 cacagattgt catccttgac gccgtcttct cgttggatgc ggtaattact gcagtaggga
     6721 tggttaacca tctgccggtg atgatggcgg cggtagtgat tgcgatggcg gttatgttgc
     6781 tggcatccaa accgctgacg cgattcgtta accagcaccc cacggtggtg gtgctctgtc
     6841 tgagcttcct gttaatgatt ggtcttagtc tggtggcaga aggtttcggt ttccacattc
     6901 cgaaaggtta cctgtatgcc gcgattggct tctcgatcat catcgaagtg tttaaccaga
     6961 ttgcgcgtcg caactttatt cgccaccagt cgactttgcc gctgcgagcg cgtactgccg
     7021 atgccatcct gcgtttgatg ggcgggaaac gtcaggccaa tgttcagcac gatgtcgata
     7081 acccgatgcc gatcccggaa ggtgcatttg ccgaagaaga acgttacatg attaacggcg
     7141 tactgacgct ggcgtcgcgt tctctgcgcg ggatcatgac gccgcgcggt gaaataagct
     7201 gggttgacgc taatctcggg gtcgatgaaa tccgcgagca actgctctct tcaccgcaca
     7261 gtctgttccc ggtatgtcgc ggtgaactgg atgaaatcat cggtattgta cgtgctaaag
     7321 aactgctggt ggcgctggaa gagggcgttg atgtggcggc gattgcttcg gcgtctccgg
     7381 cgattatcgt cccggaaacc ctcgatccga tcaacctgtt gggcgtgctg cgtcgtgctc
     7441 gcgggagctt tgttatcgtg accaacgagt ttggtgtggt acaaggtctg gtcacgccgc
     7501 tggatgtgct ggaagccatt gcgggtgaat tcccggacgc tgacgaaacg ccggaaatca
     7561 ttactgatgg tgacggctgg ctggtaaaag gcggtacaga tttgcatgcc ttgcagcagg
     7621 cgcttgatgt tgagcacctt gccgatgacg atgatatcgc gacggtcgcg ggcctcgtga
     7681 tctcggcaaa tggtcacatt ccccgtgtgg gcgatgtgat tgatgtaggg ccactgcata
     7741 tcaccatcat tgaagccaat gattatcgtg ttgatctggt tcgcattgtt aaagagcaac
     7801 cggcgcacga tgaagatg
//
LOCUS       DADMIB010000185         7756 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.187, whole genome shotgun sequence.
ACCESSION   DADMIB010000185 DADMIB010000000
VERSION     DADMIB010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7756
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.187"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..588
                     /locus_tag="JNZ89_003790"
     CDS             <1..588
                     /locus_tag="JNZ89_003790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HAY8937517.1"
                     /translation="GDNKDATPIEQCTFDVETKNGLPSTVQLFYEESKDNEPLANIHF
                     QAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQ
                     FEKLSQRDMKKYLGEMKRLADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQL
                     ISFAKSFDPTSKEEIKILTDTSKLIYDLFGVKSEK"
     gene            951..1988
                     /gene="dusA"
                     /locus_tag="JNZ89_003791"
     CDS             951..1988
                     /gene="dusA"
                     /locus_tag="JNZ89_003791"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HAY8937518.1"
                     /translation="MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYF
                     LRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEA
                     RGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDD
                     QDSYEFLCDFINTVSGKGECGMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDF
                     PHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDAYPV
                     AVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVL
                     EHALKLVADKR"
     gene            2122..2364
                     /gene="pspG"
                     /locus_tag="JNZ89_003792"
     CDS             2122..2364
                     /gene="pspG"
                     /locus_tag="JNZ89_003792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response protein PspG"
                     /protein_id="HAY8937519.1"
                     /translation="MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALM
                     IKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY"
     gene            complement(2529..3512)
                     /locus_tag="JNZ89_003793"
     CDS             complement(2529..3512)
                     /locus_tag="JNZ89_003793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HAY8937520.1"
                     /translation="MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFID
                     TYIRSGLYPPPSLPSGSGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIN
                     ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW
                     AKALGAKLIGTVGTAQKAQSALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVG
                     RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL
                     TEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP"
     gene            3595..5010
                     /locus_tag="JNZ89_003794"
     CDS             3595..5010
                     /locus_tag="JNZ89_003794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase DnaB"
                     /protein_id="HAY8937521.1"
                     /translation="MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLD
                     NERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGG
                     FAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL
                     AESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKT
                     AGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASL
                     SRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREH
                     GGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQR
                     ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
                     LTFNGQWSRFDNYAGPQYDDE"
     gene            5063..6142
                     /gene="alr"
                     /locus_tag="JNZ89_003795"
     CDS             5063..6142
                     /gene="alr"
                     /locus_tag="JNZ89_003795"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HAY8937522.1"
                     /translation="MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLE
                     TARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNE
                     EQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHF
                     ARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVS
                     PLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
                     GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERI
                     AEMTKVSAYELITRLTSRVAMKYVD"
     gene            6395..7588
                     /gene="tyrB"
                     /locus_tag="JNZ89_003796"
     CDS             6395..7588
                     /gene="tyrB"
                     /locus_tag="JNZ89_003796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709866.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HAY8937523.1"
                     /translation="MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIP
                     QLKAVAEAEARLNAQPHGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTL
                     GGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNSVRF
                     NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGF
                     SAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQL
                     KATVRRNYSSPPNLGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEM
                     PERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKA
                     FAAVM"
BASE COUNT         1881 a         1854 c         2027 g         1994 t
ORIGIN      
        1 ggggataata aagatgcgac tcccattgaa caatgtactt ttgatgtaga aactaagaat
       61 ggccttccct ccacggttca gctattttat gaggaatcta aggataatga acctttagcg
      121 aatatacatt ttcaagcaat aggttctggt tttttaacgt ttgttaatgc ctgccaggaa
      181 catgatgaca acagcttaaa attatttgct tcgctgttaa tttcactttc atattctagt
      241 gcctacgcag atttatcaga aacagtgtat attaatgaaa ataatgagag ctacctgaaa
      301 gctcagtttg aaaaattatc tcaacgtgat atgaagaagt acctgggaga gatgaagcgt
      361 ctggctgatg ggggagaaat gaattttgat ggctatctgg ataagatgtc acatctggtg
      421 aatgaaggga cgctcgatcc tgatatttta agcaaaatgc gagatgctgc accacaatta
      481 attagcttcg cgaagtcgtt tgacccaacc tcaaaggaag agattaaaat acttacagac
      541 acttctaaat taatttatga tttgttcggg gttaaatcgg agaaataata tgtgaagttc
      601 ttcgatagta tggaaggcat tatataaaag gacccaatat ttattgggtc cttttttctc
      661 tatcaatgct attagcaggg agatatatca ccaaagttta atgtgtgatt ttttatttat
      721 cgtcgaacct ggattgttta tcattggcct taacaaagtt aacggctaat aagattattt
      781 ccatcacttc gtgagagctt catgccttga gaggatctca attttctttt gcaatgagac
      841 aggcgcttcc tgttgttatg gtatagtacc ccgctattga gcctcctgaa tagtgatgct
      901 gaataacata accccatgat atatcgataa aataatctct acatttgaaa atgcacggta
      961 attctgaaat gcaaaaaatc aaccaaacca gcgcaatgcc tgaaaaaact gacgttcact
     1021 ggagtggtcg gtttagcgtt gcaccaatgc tcgactggac ggacagacat tgccgctatt
     1081 tcttgcgtct gctttcccgc aatacgttgc tgtataccga aatggtgacc acaggggcga
     1141 ttattcacgg taaaggtgat tacctggcgt acagtgaaga agaacatccg gtagcgttgc
     1201 aactcggcgg tagcgatccg gcggcgctgg cacagtgtgc gaagctggca gaagcgcgtg
     1261 gatatgatga gatcaacctg aatgtcggct gcccgtctga ccgggtgcag aacggcatgt
     1321 ttggtgcgtg tctgatgggt aatgcgcagc tggttgccga ttgcgtgaaa gcgatgcgcg
     1381 atgtggtgtc gattccggtg acggtgaaaa cgcgtattgg catcgatgac caggacagct
     1441 atgaatttct ctgcgatttc atcaacaccg tttccggcaa aggcgagtgt gggatgttca
     1501 tcatccatgc acgtaaagcc tggctttcgg ggttaagccc gaaagaaaac cgtgaaatcc
     1561 cgccgctcga ttatccgcgt gtgtatcaac tgaagcgtga ctttccgcat ctgacaatgt
     1621 cgattaacgg tggtatcaag tcgctggaag aggccaaagc acacctgcaa catatggatg
     1681 gcgtgatggt cgggcgcgag gcgtatcaga atccgggtat tctggcggcg gtagaccggg
     1741 agatctttgg ttcctcggat accgatgcct atccggtggc ggtagtgcgc gccatgtatc
     1801 cgtacattga gcgtgaactc agccagggga cgtatctcgg ccatattacc cggcatatgt
     1861 tgggcttgtt ccagggtatt cctggcgcgc ggcagtggcg gcgttattta agtgaaaatg
     1921 cccataaagc gggtgcagac attaatgtgc tggaacacgc gctcaaactg gtggcggata
     1981 agcgttaact tttcaccaaa aagtagtcaa attcaccacg ccctgcgcac cgtcgcgggg
     2041 cgttttgctg ttaaatcaat agattatttt tggcatgatt cttgtaatgc cagcaagaga
     2101 tttcatattt gggagagcat catgctggaa ctactttttg tgattggctt ttttgtcatg
     2161 ctgatggtca ccggcgtttc gttgctgggc attatcgccg cgctggttgt ggcgacggcc
     2221 attatgttcc tcggcggtat gctggcattg atgattaagt tgctgccgtg gttactactg
     2281 gcgattgcgg tggtgtgggt tattaaggcg attaaagcac caaaagtgcc taaatatcag
     2341 cgttatgacc gctggcgtta ctaagggatt gtgcggatga tcacaaccta aggttttatc
     2401 cttagaacaa aataggaatt gataatcaaa tctgtcacta ttgcgcctct aacagattca
     2461 tcgtgctgta ccctacatac agccgactat aaaaagaaag ggcttcccag gtggaagccc
     2521 tatttctttt atggaatcag caggctggaa ccttgcgtcg cccggctttc cagaatctca
     2581 tgcgcacgct gcgcatcctt cagcggatat ttctgctgct cggcgacatc gaccttaatc
     2641 acaccgctgg caatcaaaga gaacagttca ttactggcct cggttaattc ctcccgtgtg
     2701 gtgatatagc cttgcaggga agggcgtgtc acatacaacg agcctttttg attgagaatg
     2761 cctaagttca caccggtaac cgcacctgat gagttgccaa aactgaccat taagccgcgg
     2821 cgttgcaggc aatccagcga ccgttcccag gtgtctctgc ccacggaatc gtacactacg
     2881 cgcactttct taccgccggt gatctctttc aatcgctcga ccagattctc ttcacgatag
     2941 ttaataacct gccacgcgcc ggcttttagc gcgctctgcg ctttttgcgc ggttcctacg
     3001 gtgccgataa gtttcgcgcc cagagctttt gcccactggc aggcaatcaa gccaacgccg
     3061 ccagccgctg cgtggaacag gaactgttca tcgggtttaa tttcataggt tttgcgcagc
     3121 agataataaa ccgttaagcc tttcaggaaa gatgctgcag cttgctcaaa agaaatagcc
     3181 gcaggcagaa tcgccgcttt atccgcatta atgttatgca cagagctgta agcgcctaac
     3241 gccgactgcg catagactac acgatcgcct gccttaatat gctttacacc actgccgact
     3301 ttactcacga tgcctgccgc ttcggtacct gatccgctgg gtagtgatgg cggcgggtaa
     3361 aggccgctgc ggatatacgt gtcgataaaa ttgatgccga tggctttatt ttcgacctgg
     3421 atttcattct ctgccggatc ggcaggagtg aactctacgg cttgaagtac ttccgggcca
     3481 ccgtgcttgt gaaattcaat tcgtgttgcc atgtgtcctc cagaacgtat cgtcagggtc
     3541 tgcttcatat ggtaaagttt cgacccattc tttatctcgg taactccatt cactatggca
     3601 ggaaataaac ccttcaacaa acagcaggct gaaccccgcg aacgcgatcc acaagttgcc
     3661 gggctgaaag tgcctccgca ctcgatcgaa gcggagcagt cggtgttggg cggtttaatg
     3721 ctggataacg aacgctggga cgatgtagcc gagcgtgtgg tggcagacga tttttacacc
     3781 cgcccacacc gccatatctt tactgaaatg gcgcgtttgc aggaaagcgg tagtcctatc
     3841 gatctgatta cccttgcgga atcgctggaa cgccaggggc aactcgatag cgtcggtggt
     3901 tttgcttatc tggcagagct gtcaaaaaat acgccaagtg cggcgaacat cagtgcttat
     3961 gctgacatcg tgcgtgaacg tgccgttgtc cgtgagatga tctcggttgc gaatgagatt
     4021 gctgaagccg gttttgatcc gcaggggcgt accagcgaag atctgctgga ccttgctgaa
     4081 tcccgcgtct ttaaaattgc cgaaagtcgt gcaaacaaag acgaagggcc gaagaacatc
     4141 gccgatgtgc tcgacgcaac cgtggcgcgt attgagcagt tgtttcagca gccacacgat
     4201 ggcgttaccg gagtaaacac cggttatgac gatctcaaca aaaaaaccgc tggcttgcag
     4261 ccgtcggatt tgatcatcgt cgccgcgcgt ccgtcgatgg gtaaaacaac atttgcgatg
     4321 aacctcgtcg aaaacgcggc gatgttgcag gataaaccag tacttatctt ctcgctggag
     4381 atgccttcag aacagattat gatgcgttct ctggcgtcgc tgtcgcgcgt tgaccagact
     4441 aaaatccgta ccgggcagct cgatgatgaa gactgggcgc gcatttccgg caccatgggt
     4501 attttgctcg aaaaacgcaa tatctatatc gatgactcct ccggcctgac gccaacggaa
     4561 gtgcgttccc gcgcacgacg tattgcccgt gaacacggcg gcatcgggct tatcatgatc
     4621 gactacctgc aactgatgcg cgtaccggcg ctttccgata accgtacgct ggaaattgca
     4681 gaaatctctc gctcgctgaa agcactggcg aaagaactga acgtgccggt ggtggcgctg
     4741 tcccagttga accgttctct ggaacaacgt gccgacaaac gcccggtcaa ctccgacctg
     4801 cgtgaatctg gctctatcga gcaggatgcg gacttgatca tgtttatcta tcgtgatgag
     4861 gtgtatcacg aaaacagtga tttaaaaggc atcgcggaaa ttattatcgg taaacaacgt
     4921 aacggcccaa tcgggacggt acgcctgacc tttaacggtc aatggtcgcg cttcgacaac
     4981 tatgcggggc cgcagtacga cgacgaataa taattatttt atgaattagg caattaaagc
     5041 aaacacttat caaggaacac aaatgcaagc ggcaactgtt gtgattaacc gccgcgctct
     5101 gcgacacaac ctgcaacgtc ttcgtgaact ggcccctgcc agtaaaatgg ttgcggtggt
     5161 gaaagcgaac gcttatggtc acggtcttct tgagaccgcg cgaacgctcc ccgatgctga
     5221 cgcctttggc gtagcccgtc tcgaagaagc tctgcgactg cgtgcggggg gaatcaccaa
     5281 acctgtactg ttactcgaag gcttttttga tgccagagat ctgccgacga tttctgcgca
     5341 acattttcat accgccgtgc ataacgaaga acagctggct gcgctggaag aggctagcct
     5401 ggacgagccg gttaccgtct ggatgaaact cgataccggt atgcaccgtc tgggcgtaag
     5461 gccggaacag gctggggcgt tttatcatcg cctgacacag tgcaaaaacg ttcgtcagcc
     5521 ggtgaatatc gtcagccatt ttgcgcgcgc ggatgaacca aaatgtggcg caaccgagaa
     5581 acaactcgct atctttaata ccttttgcga aggcaaacct ggtcaacgtt ccattgccgc
     5641 gtcgggtggc attctgctgt ggccacaatc gcattttgac tgggtgcgcc cgggcatcat
     5701 tctttatggc gtctcgccgc tggaagatcg ctccaccggt gccgattttg gctgtcagcc
     5761 agtgatgtca ctaacctcca gcctgattgc cgtgcgtgag cataaagccg gagagcctgt
     5821 tggttatggt ggaacctggg taagcgaacg tgatacccgt cttggcgtag tcgcgatggg
     5881 ctatggcgat ggttatccgc gcgccgctcc atccggtacg ccagtgctgg tgaacggtcg
     5941 cgaagtaccg attgtcgggc gcgtggcgat ggatatgatc tgcgtagact taggtccaca
     6001 ggcgcaggac aaagccgggg atccggtcat tttatggggc gaaggtttgc ccgtagaacg
     6061 tatcgctgaa atgacaaaag tgagcgctta cgaacttatt acgcgcctga cttcaagggt
     6121 cgcgatgaaa tacgtggatt aatcgttctg taatatttga ttgtctgtgc cggatgcggc
     6181 gtgaatgcct tatccggcca ataaaatcct aaaaattcaa taagttgatg ttctttcatg
     6241 ctcttataaa ggtcgtgcct ctggcggatg ttcgtttgtc atgagtctca ctctgttgct
     6301 aattgccgtt cgctcctgaa catccactcg atcttcgcct tcttccggtt tattgtgttt
     6361 taaccacctg cccgtaaacc tggagaacca tcgcgtgttt caaaaagttg acgcctacgc
     6421 tggcgacccg attcttacgc ttatggagcg ttttaaagaa gaccctcgca gcgacaaagt
     6481 gaatttaagt atcggtctgt actacaacga agacggaatt attccacaac tgaaagccgt
     6541 ggcggaggcg gaagcgcgcc tgaatgcgca gccccatggc gcttcgcttt atttaccgat
     6601 ggaagggctt aacagctatc gccatgccat tgcgccgctg ctgtttggtg cggaccatcc
     6661 ggtactgcaa caacagcgcg tagcaaccat tcaaaccctt ggcggctcag gggcattgaa
     6721 agtgggcgcg gatttcctga aacgctactt cccggaatca ggcgtctggg tcagcgatcc
     6781 tacctgggaa aaccacgtag caatattcgc cggggctgga ttcgaagtga gtacttaccc
     6841 ctggtatgac gaagcgacta acagcgtgcg ctttaatgac ctgttggcga cgctgaaaac
     6901 attacctgcc cgcagtattg tgttgctgca tccatgttgc cacaatccaa caggtgccga
     6961 tctcactaat gatcagtggg atgcggtgat tgaaattctc aaagcccgcg agcttatccc
     7021 attcctcgat attgcctatc aaggatttag tgccggtatg gaagaggatg cctacgctat
     7081 tcgcgccatt gccagcgctg gattacccgc tctggtgagc aattcgttct cgaaaatttt
     7141 ctccctttac ggcgagcgcg tcggcggact ttctgttctg tgtgaagatg ccgaagccgc
     7201 tggccgcgta ctggggcaat tgaaagcaac agttcgccgc aactactcca gcccgccgaa
     7261 tttgggtgcg caggtggtgg ctgcagtgct gaatgacgag gcattgaaag ccagctggct
     7321 ggcggaagta gaagagatgc gtactcgcat tctggcaatg cgtcaggaat tggtgaaggt
     7381 attaagcaca gagatgccag aacgcaattt cgattatctg cttaatcagc gcggcatgtt
     7441 cagttatacc ggtttaagtg ccgctcaggt tgaccgacta cgtgaagaat ttggtgtcta
     7501 tctcatcgcc agcggtcgca tgtgtgtcgc cgggttaaat acggcaaatg tacaacgtgt
     7561 ggcaaaggcg tttgctgcgg tgatgtaatg caggaaagca ggctggagtt acccagcctg
     7621 cagtgaaatt aaactgtcgt cgctttcact atttctttgt agatgatttt tttgatgccg
     7681 ttgttctacg tgagagataa taaaacgttg tcagttcttt tattgttaag tttatcccaa
     7741 ttaactggaa ttcctt
//
LOCUS       DADMIB010000186         7639 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.188, whole genome shotgun sequence.
ACCESSION   DADMIB010000186 DADMIB010000000
VERSION     DADMIB010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7639)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7639)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7639
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.188"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            564..3977
                     /locus_tag="JNZ89_003797"
     CDS             564..3977
                     /locus_tag="JNZ89_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000438152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HAY8937524.1"
                     /translation="MEQSLNFEMLRSQWPELAELACMAERYVHSDPESCLVKLRNYTE
                     LMVRWLYRQERLPEGIKANLYDLMNADVFTSMMPEAIIMKMDALRIHGNRAAHGGRIK
                     AKDTYWLLKEAYLLGIWLYVRYAHGNVDDCPKFTLPPLTQSSGRADEKRLEDAIKAQD
                     ESRERELALQRALQQEQEKAEHLTQRLNEARARNQHVADILSIDEAETRRRLIDSRLL
                     AADWNVGEELKNTDQVTQEHPVKEQPTTSGDGYADYVLWDEAHKPLAVVEAKKTSVNA
                     EQGRIQARLYADWLEKEYGQRPVIFYTNGYDIWLWDDHKTHGYPPRRVFGFYSKESLQ
                     YLIQQRETRLPLNRVPHVKDNEGKAVAGRLYQLETIARVSERFTNKYRQSLIVQATGT
                     GKTRVAIALSKLMIDARWVKRVLFLCDRKELRKQAANAFNQFTNEPLYVVGKSKKADR
                     QNARIYIATYPGMMKIMDHFDVGYFDLIIADESHRSIYNVYGDLFKYFDALQIGLTAT
                     PIDMVSKTTFGLFGCEGRIPTANYSLEDAIADNNLVPYEVVTHTTEFLREGIKREKLS
                     DAQIRELEEQGIDPNTLEFDGKALDEAIYNKDTNRYILRNLMENGLKDRDGQLPGKTI
                     IFARNHKHALLLNELFDDMYPQFAGRFCQVIDNYDPRAEQLIDDFKGLDESTNKELTI
                     AISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRGTRLCPGLYGYDDNGKPLDKQ
                     KFRIFDHWGNFEYHELHTEEAEVTATKSLAQKRFEAWVMLGAAAQRKFDKQAVDLVAH
                     QLREQINALDEKSIAVQEKWQQKAQYSDEKVLRQLSPKTQQDLLSVLAPLMQWLDVRG
                     QSDAIRFDMDILAAQTARYTNPEELDVLWPIIVEKVERLPPHLAQVQQQGQRINQLRN
                     LSWWKQASLEELEDIRIHLRGIMHLMEKDATPKFGSIQVDITEDANLIQTETRKTNIR
                     SIDFKLYRQQVQGALEPLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRAL
                     KEFYPQATASLDKLLRTIIGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLKNHIRDYG
                     TIEMRQLFEQPFTHIHNEGVTGVFPDIAQIARLQKIVEELGVVTDAATV"
     gene            4041..5675
                     /locus_tag="JNZ89_003798"
     CDS             4041..5675
                     /locus_tag="JNZ89_003798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HAY8937525.1"
                     /translation="MITGDLKSKIDGLWEDFWVGGITNPLTVIEQITYLMYSRMLDTQ
                     EQRDEKRKQIAGIDFKPRFAPEQQEFRFSHYSNLGSDEMMEVVRDGVFQHFRQLGQAD
                     ASKVTLLGNFMKDARLEIVKPSLLTKAVEVIKNLPLDRGDTKGDLYEYLLSKLTTAGI
                     NGQFRTPRHIIRTMVEMMEPNPARGETICDPACGTGGFLATSYEYLLEKYSSLESIHT
                     EIGTNERGELEEQKIFTGDLLTPWRNHVDNNMFHGYDFDTTMLRIAAMNLIMHGVDAP
                     DIHYQDTMSQSFSTNFPQASKNAFNLILANPPFTGSLDEEDIDSTLSAMVKTKKTELL
                     FLARILQMLKVGGRSATIVPQGVLFGSSKAHQSLRKTLVEDNQLETVINLPSGVFKPY
                     AGVATAILIFTKGGQTDEVWFYDLQNDGYSLDDKRNPIKDNDLPHLLASWKHYRTLRG
                     LPVDNFMGKKLASLLKQQYPEGINAGVDFKDRTQAAFVVPKADIAAQKYDLSINRYKE
                     VVYQAEEYEDPKVILKRLKDLEKEILADLDELEGML"
     gene            5684..6754
                     /locus_tag="JNZ89_003799"
     CDS             5684..6754
                     /locus_tag="JNZ89_003799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001438891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HAY8937526.1"
                     /translation="MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLC
                     SYPTIIIGRKGSVGAITWAPSGGWIIDTAYYVEIKDNNKLDLRYLFYILSGIDLTKKT
                     ITTSIPGLNRDDLYDTFIKLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATF
                     ATMYGNPITNPKKWPVHLMGEIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKY
                     ATYIPQEKAKRIFEVDDVMIARYGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFY
                     LLQLPEYHDVVVKNSERTAGQTGVNLELLNKFNVPLPPIYYQDEILDRLARIEKFKEK
                     IEISLNHLEIQFLSLQKRLIGF"
     gene            complement(6879..7595)
                     /locus_tag="JNZ89_003800"
     CDS             complement(6879..7595)
                     /locus_tag="JNZ89_003800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937527.1"
                     /translation="MLSETKKRIPAHLFRMIKDELYELVLTDDPKGKLYVRDSEKIEE
                     GVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIREVVFENGYYDWGCVVNDVLP
                     NICKGNARIPIFHFLNHAKLINPDGSIINETELSGGVLSRLNITPISFQSQGWDKRRS
                     ETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELLKILKKHIDEAMNTQVL
                     SSNFCKLVCIYDYIKNSHRY"
BASE COUNT         2221 a         1739 c         1791 g         1888 t
ORIGIN      
        1 tcctgttctc ccaaatatca tggtattgat acgggagatt atgccgtaca ggtacgacac
       61 gttatgtcgt gccaaagggg agtggataga aaaaatggcg aagatgcgaa aagttgatta
      121 atgcattgaa aaaaatgaat taataatgaa cttgggtaaa agcgccatca aaatacgaca
      181 cgacctgtcg tattttgtgt tagccgggaa aagatatctg ctacttacta aaatgattta
      241 gtgctgaaaa tatttataag ccaataaata gacaggtatt acggagtaac gcccaggcta
      301 ttttaacgag cctgctgttt tattggctca aaaaacatat cccatagatg atcagccata
      361 cccgcgttag tgagcaaggt atcccttgag tagccagggc tgaagacgcc cattgatggg
      421 cgaaaaccaa ggttctggcc gttaaagcgg ctatgtcgtt aaacacatca ccaccatatg
      481 ccatccggct cacttcgtcg gccaaattag tgtgatattc tttccagaat ttctgttgta
      541 tccacaacat aaggcgatga ttgatggagc agtctctcaa ttttgaaatg ttgcgcagcc
      601 agtggccgga actggcagaa ctcgcatgta tggcagagcg ctatgttcac tccgatccgg
      661 aaagctgcct ggttaagctg cgcaactaca ccgaattgat ggtgcgctgg ttgtatcgtc
      721 aggagcggtt gccggaaggt attaaggcta atctttacga tttaatgaac gctgatgtct
      781 ttaccagcat gatgccggaa gccatcatca tgaaaatgga tgcgctgcgt atccatggca
      841 accgtgccgc gcacggcgga cgtatcaaag ctaaagatac ttactggctg ctcaaagaag
      901 cgtatttgtt gggaatttgg ctgtatgttc gctacgccca cggtaatgtt gatgactgcc
      961 ccaaatttac actccctcca ttaacacaat cttcaggtcg tgcagatgaa aaacgtctgg
     1021 aagatgcaat caaggctcag gatgaaagcc gtgagcgcga actggcgcta caacgcgcac
     1081 tacagcaaga acaggaaaag gccgaacacc tcactcaacg cctgaatgaa gccagagcgc
     1141 gtaaccagca tgttgccgat attctctcta ttgatgaagc ggaaacccgc cgtcgcctga
     1201 ttgactctcg cttacttgca gccgactgga atgtagggga agaacttaaa aacacggatc
     1261 aagtcacaca agaacatcca gtcaaagagc aacccaccac ctctggtgac ggttatgcag
     1321 actatgtctt gtgggatgag gcacacaaac cgttggcggt ggtggaagca aaaaaaacca
     1381 gcgtcaatgc cgagcaagga cgaattcagg cccggctgta tgcagactgg ctggaaaaag
     1441 aatacggtca gcgtccggtc atcttctaca ccaacggcta tgatatctgg ctgtgggatg
     1501 accataaaac tcatggttat cccccgcgtc gggtgtttgg cttctacagc aaggaaagcc
     1561 tgcaatatct tattcagcag cgtgaaaccc gtctgccgct gaacagagtg ccacacgtaa
     1621 aagataacga aggtaaggcc gttgccggac gtttgtacca gctcgaaacc attgcccgcg
     1681 tcagtgaacg gtttaccaac aagtaccgac aatcgttaat tgttcaggct acgggtacag
     1741 gcaaaacccg cgtggcaatt gcactaagca aactgatgat tgatgcccgc tgggtaaaac
     1801 gcgtcctgtt tctttgcgac cgtaaagaac tgcgtaaaca ggcggcaaat gcctttaatc
     1861 aattcaccaa tgagccgctg tatgtggtcg ggaaatcgaa aaaagcagac aggcagaatg
     1921 ccagaatcta catcgctacc tatcccggta tgatgaaaat catggaccat ttcgatgtcg
     1981 gttatttcga tttgatcatc gccgatgaat cccaccgctc tatctacaac gtctacggcg
     2041 atctgtttaa gtattttgat gccctccaga ttggcctgac ggccacgcca attgacatgg
     2101 tgagtaaaac cactttcggc ctgtttggtt gtgaaggacg tattcctacc gccaactaca
     2161 gcctggaaga tgccatcgcc gataacaatc tggttcccta tgaggttgtc acacacacaa
     2221 cagaattcct gcgcgaaggt atcaaacggg agaaattaag cgacgcacaa atccgcgagc
     2281 tggaagaaca aggcatagat cccaatacgc tggagtttga tggcaaggcg ctggatgagg
     2341 cgatctacaa caaagacacc aaccgctata tcctgcgtaa cctgatggaa aatggcctga
     2401 aagatcggga cggccagttg cctggtaaaa ccatcatttt cgcccgtaac cacaaacacg
     2461 cgctgctgtt gaatgaattg ttcgacgata tgtacccaca gtttgccggg cgcttctgcc
     2521 aggtcatcga caactacgat ccccgcgccg agcaactgat tgatgatttt aaagggctgg
     2581 atgaaagcac caacaaagag ctgaccatcg ctatctccgt tgacatgctc gataccggta
     2641 ttgatgtccc ggaaattgtg aatctggtct ttgccaaacc ggtcaaatca aaagtgaagt
     2701 tctggcagat gattggccgt ggtacgcgcc tctgtccggg gttgtacggt tacgacgata
     2761 acggcaaacc gctggataaa cagaaattcc gcattttcga tcactggggc aattttgagt
     2821 atcacgagct gcataccgaa gaggcggaag tcacagcgac aaaatcgctt gcgcaaaaac
     2881 gcttcgaagc gtgggttatg ctgggggccg ctgcgcagcg taaattcgac aaacaggcgg
     2941 tggatttagt tgctcaccag cttcgcgagc aaatcaacgc actggatgaa aagtcgattg
     3001 ccgtacagga aaaatggcag cagaaagcgc agtacagtga tgaaaaggtg ctgcgccagc
     3061 tttctccgaa aacacagcag gatctgctat ctgttctggc cccgttgatg cagtggctgg
     3121 acgtgcgcgg gcaaagcgat gccatacgct ttgatatgga tattctggcg gcgcaaactg
     3181 cccgttatac caacccggaa gagctggatg ttctctggcc gatcatcgtc gaaaaagtgg
     3241 agcgcctgcc gccgcatttg gcgcaggtgc agcaacaggg acaacgaatc aatcagcttc
     3301 gtaatttaag ctggtggaag caggccagcc tggaagagct ggaggatatt cgcattcatt
     3361 tgcgcggtat catgcacctg atggaaaaag acgcgacgcc taaatttggt tcgatacagg
     3421 tggatattac cgaagatgcg aacctgatcc agacggagac ccgcaaaact aatatccgct
     3481 cgattgattt caaactctat cgccagcagg ttcagggggc gctggagccg ctgttccagc
     3541 aaaacccggt tctgaagaaa atccgcaacg gcgagccagt cacgcaaaac gagctggatg
     3601 agctggcgaa gctggtgctg atccagaacc ccaacgttga tattcgtgcg ttgaaagagt
     3661 tttatccgca ggcaaccgcc agcctggata aacttttgcg taccatcatc gggatggaca
     3721 gcgacgcggt ggaagtgcgt tttgcccagt tcgccgctga taacagcctg accagccaac
     3781 aactgcgctt cctgtcattg ctgaaaaacc acattcgcga ttacggcacc attgaaatgc
     3841 ggcagctctt tgaacagcct tttacgcata tccacaacga aggcgttacc ggtgtgttcc
     3901 ctgatatagc gcaaatcgcc cgcctgcaaa agatagtcga agagctgggt gttgtgaccg
     3961 acgcagcgac ggtataatac acgcatgaca agccccggca gcggggcttt tgtatttaaa
     4021 acaggatata aacgctaaca atgattactg gcgacttaaa aagtaaaatc gacggactat
     4081 gggaagattt ctgggtgggt ggtatcacca acccgctgac cgtaatcgaa cagatcacct
     4141 atctgatgta ttcccggatg ctggataccc aggaacaacg cgacgaaaag cgtaaacaaa
     4201 tcgcgggtat tgattttaaa ccgcgttttg cgccagaaca gcaggagttc cgtttcagtc
     4261 actatagcaa ccttggctcg gatgagatga tggaagtggt gcgcgatggc gtattccagc
     4321 atttccgtca gctcggccag gccgatgctt cgaaggtgac gctgctgggc aactttatga
     4381 aagatgctcg tctggagatt gttaagccgt cattgctgac caaagcggtt gaggtaatca
     4441 aaaacctgcc attggatcgc ggcgacacca aaggcgacct ttacgaatac ctgttaagca
     4501 agctgacaac tgccggaatc aacggacagt tccgcacacc gcgccacatt atccgcacga
     4561 tggttgaaat gatggagccg aacccggccc gcggcgagac gatttgcgat cccgcctgtg
     4621 gcaccggtgg ttttctggca accagctatg aatatctgct ggagaagtac agctcgctgg
     4681 aatccattca tactgagatt ggcaccaacg aacgtggcga gctggaagag caaaaaatct
     4741 ttaccggcga tctgctgaca ccgtggcgta accatgtgga taacaacatg ttccacggtt
     4801 acgactttga caccacaatg ctacgtatcg ccgccatgaa cctgattatg cacggcgtgg
     4861 atgcgcctga tatccactat caggacacaa tgagccagag tttcagcaca aacttcccgc
     4921 aggccagtaa aaacgccttc aacctgattc tggcgaaccc gccgtttacc ggttcactgg
     4981 acgaggaaga tatcgactcc acgctgtcgg caatggtgaa aaccaaaaaa accgaactac
     5041 tgttcctggc gcgtattctg caaatgctga aagtgggcgg gcgcagtgcc actatcgtgc
     5101 cgcagggcgt gctgtttggc tctagcaagg cgcaccagtc acttcgcaaa acgctggtgg
     5161 aagataacca actggaaacg gtgatcaatc tgccttctgg tgtatttaaa ccttacgctg
     5221 gcgtggcgac ggcgatcctg atctttacca aaggcggtca aacggatgag gtctggttct
     5281 acgatctaca aaatgacggc tacagcctgg atgataagcg caacccgata aaagacaacg
     5341 atctgccgca tctgctggca agctggaagc attaccgtac tttacgcggg ctaccggttg
     5401 ataactttat gggtaagaag ttagcctcgt tgcttaaaca gcagtacccg gaagggatta
     5461 atgctggcgt tgattttaaa gatcgcacgc aggcggcgtt tgttgtaccg aaagcggata
     5521 ttgctgcgca gaaatacgat ctatccatca accgttataa agaagtcgtg tatcaggcgg
     5581 aggaatatga agatccgaag gtgatattga agcggttaaa ggatctggaa aaagagattc
     5641 tggcggattt ggatgagctg gaggggatgc tgtgagttcg gcgatggtga agttagggga
     5701 tgttattaat gttcactacg gaaaagcatt aaaagctgat cagcgtgtat cgaatggaag
     5761 tgtccatgtg tttggtagtt caggaattgt cggcaaccac gataaaacgc tttgcagcta
     5821 tcccacgata attattggcc gcaaaggcag cgttggtgct attacctggg ctccaagcgg
     5881 aggctggatc attgatactg cttattacgt tgagatcaaa gataataata agttagatct
     5941 ccgatacttg ttttatattc tgagcggaat tgatctcact aagaaaacga ttaccacaag
     6001 tattcctgga ttaaatagag acgatctcta tgatacattt attaaattac caccttttga
     6061 agagcagaaa cgaattgtgg atcttctcga taaagctgag ggtatacgcc aaaaacgtga
     6121 gcaatccatc aaactggctg atgatttttt gcgtgctacg tttgctacaa tgtatgggaa
     6181 tcctattaca aaccccaaaa aatggcctgt ccatcttatg ggagaaatta ttgaatttaa
     6241 aggtggaaat caaccaccta aaagtgattt tatttttgaa cctaaacagg gttatattag
     6301 attagtacaa attagagatt ttaaatccga taaatatgcg acgtacattc cgcaagaaaa
     6361 agcaaaacgt attttcgaag ttgatgatgt tatgattgct cgttatgggc cacctgtgtt
     6421 tcaaatactt agaggtttat ccggcagcta caatgtagct ttaatgaaag cttcacccaa
     6481 agaaaatatt aggaaggggt ttatattcta tcttctacaa cttccggaat atcatgatgt
     6541 tgttgtaaaa aactctgaaa gaacagcagg acaaaccggt gtaaatcttg aactattaaa
     6601 caaattcaat gttcccctcc cacctatata ctatcaagat gagatattag atagattagc
     6661 tagaattgaa aaatttaaag aaaaaataga aatatcatta aatcatttag aaatacaatt
     6721 tttatcacta cagaagagat taataggttt ttaaatcctt agtatcgaaa taaacattaa
     6781 tttattatat taaattaaga tattttagga aattaaggcg tcactcttag gtaacgcctt
     6841 tttttactat ctcgccccct aagaaggtta tatcttactt aatacctgtg actatttttg
     6901 atataatcat aaatacacac taatttgcaa aaattacttg acaatacctg agtattcata
     6961 gcttcatcta tatgtttttt caatattttg agaagctctc ccatatcgcg cttgattaat
     7021 ccaggctcca tataaggcat cattcttaaa aagaaactga aatcataagc aagatataac
     7081 tcattgaccc ccaccttgac ctcaggaacg gtttcagagc gtcgtttatc ccatccttga
     7141 gactgaaaac taataggagt gatatttaat cgtgataaaa cgccacctga gagttctgtt
     7201 tcattaatta tactcccatc aggattaatt aatttagcgt gatttaagaa gtgaaaaata
     7261 ggaatgcgcg cattgccttt gcatatattt ggcaaaacat cattaacaac acatccccaa
     7321 tcataatatc cattttcaaa tacaacctct cggatgagat ctacacgctc cagtccaacc
     7381 aatcctttag ttgccatcga ttccgatttt tttaccatcg aaatagcacc atatcccaca
     7441 acaaactcag ttgtactgac cccttcttca attttctctg aatccctcac atataatttt
     7501 cctttcggat catcagttaa gaccaactca taaagttcat cttttatcat tcggaataaa
     7561 tgtgctggaa tccttttttt agtttcactc agcacctcaa atatttcttt ataggatggt
     7621 gcctgaacat attttaccg
//
LOCUS       DADMIB010000187         7627 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.189, whole genome shotgun sequence.
ACCESSION   DADMIB010000187 DADMIB010000000
VERSION     DADMIB010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7627
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.189"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..314)
                     /locus_tag="JNZ89_003801"
     CDS             complement(<1..314)
                     /locus_tag="JNZ89_003801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HAY8937528.1"
                     /translation="MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGV
                     VFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDK
                     VL"
     gene            complement(308..1546)
                     /locus_tag="JNZ89_003802"
     CDS             complement(308..1546)
                     /locus_tag="JNZ89_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY8937529.1"
                     /translation="MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDP
                     GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQ
                     RFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPG
                     GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVG
                     LSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVTMDVASTLKVLG
                     CQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELT
                     MAADKIILAVGQHARLDAFAELEPQRNAIKTQNYQTRDPQVFAAGDIVEGDKTMVYAV
                     KTGKEAAEAIHHYLEGACSC"
     gene            complement(1943..2182)
                     /locus_tag="JNZ89_003803"
     CDS             complement(1943..2182)
                     /locus_tag="JNZ89_003803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2542 family protein"
                     /protein_id="HAY8937530.1"
                     /translation="MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY
                     VWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR"
     gene            complement(2185..2904)
                     /gene="sanA"
                     /locus_tag="JNZ89_003804"
     CDS             complement(2185..2904)
                     /gene="sanA"
                     /locus_tag="JNZ89_003804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane permeability protein SanA"
                     /protein_id="HAY8937531.1"
                     /translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
                     RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTM
                     RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
                     GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED
                     AQGYPAVTPEQLLELQKKQGK"
     gene            complement(3054..3938)
                     /gene="cdd"
                     /locus_tag="JNZ89_003805"
     CDS             complement(3054..3938)
                     /gene="cdd"
                     /locus_tag="JNZ89_003805"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HAY8937532.1"
                     /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA
                     TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH
                     AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY
                     LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK
                     DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDAT
                     SATLKALGCHSIDRVLLA"
     gene            complement(4068..4763)
                     /locus_tag="JNZ89_003806"
     CDS             complement(4068..4763)
                     /locus_tag="JNZ89_003806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidB/LrgB family autolysis modulator"
                     /protein_id="HAY8937533.1"
                     /translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF
                     LMLTGISYGSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA
                     MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
                     FGHTLLNAMRIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI
                     APFLFPIILAVMG"
     gene            complement(4760..5158)
                     /locus_tag="JNZ89_003807"
     CDS             complement(4760..5158)
                     /locus_tag="JNZ89_003807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HAY8937534.1"
                     /translation="MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGML
                     ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV
                     STLVVFLVVSWSSQLVHGERKVVGQKGSEE"
     gene            5397..6347
                     /gene="dusC"
                     /locus_tag="JNZ89_003808"
     CDS             5397..6347
                     /gene="dusC"
                     /locus_tag="JNZ89_003808"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001362271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HAY8937535.1"
                     /translation="MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVK
                     VFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKT
                     VNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA
                     GATELVVHGRTKEQGYRAEHIDWQAIGEIRQRLNIPVIANGEIWDWQSAQQCMAISGC
                     DAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQW
                     LSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIDKLR"
     gene            complement(6734..6817)
                     /gene="yohP"
                     /locus_tag="JNZ89_003809"
     CDS             complement(6734..6817)
                     /gene="yohP"
                     /locus_tag="JNZ89_003809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohP"
                     /protein_id="HAY8937536.1"
                     /translation="MKIILWAVLIIFLIGLLVVTGVFKMIF"
     gene            6951..>7627
                     /locus_tag="JNZ89_003810"
     CDS             6951..>7627
                     /locus_tag="JNZ89_003810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311052.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HAY8937537.1"
                     /translation="MLLMYCHAKLKNISQHTVISAHRFLPDYSPMNRDSFYPAIACFP
                     LLLMLAGCAPMHETRQALSQQTPAAQVDTALPTALKNGWPDSQWWLEYHDNQLTSLIN
                     NALQNAPDMQVAEQRIQLAEAQAKAVATQDGPQIDFSADMERQKMSAEGLMGPFALND
                     PAAGTTGPWYTNGTFGLTAGWHLDIWGKNRAEVTARLGTVKARAAEREQTRQLLAGSV
                     ARLYWEW"
BASE COUNT         1967 a         1963 c         1909 g         1788 t
ORIGIN      
        1 atcaatactt tgtccgggta atcttctttc agccgacgca gggcggccag attctcctcc
       61 agcggatgct cggcaatctg ctccatattt ttgaagccga taaaaccggt atcttctttc
      121 accagatgat caaaacgcgg cgagacttcg ttggcgataa aaaagccgat cgttttaaac
      181 accacaccgc cccaacctgt gtcgtaggct ttggcacaca tctcatagca gttgcctacc
      241 ggcgaagaag agaggcagaa cgggttggga aacttcacgc cgcaaaaagt aatcgaaaga
      301 tctttcgtta acatgagcaa gctccctcta aatagtgatg aatcgcctcg gcggcttctt
      361 tcccggtttt cacggcatag accatggttt tgtcaccctc aacaatatcg ccagcagcaa
      421 agacttgcgg gtcgcgggtc tggtaatttt gtgttttgat ggcgttacgc tgcggctcta
      481 actccgcaaa ggcatctagt ctggcatgct gaccgacggc gagaataatt ttatctgccg
      541 ccatcgtcag ttcgcccgat aaccgtacat gcttaaacgt gactttattg ccttccacgg
      601 ctactggcgt gaatccatcg atgatcgaaa cgcccagctc ccgggcgctg gtaaactctt
      661 tttcgcttgc cggaaactca tctaactctt cacgcgctac gcaagttacc gcctgacagc
      721 cgagaacttt cagcgtgctg gctacgtcca tcgtgacatc accgccgccg ataattaatg
      781 cgctttgtgg aatgctgata tcgccttgcg cctgtcgtgc acgttgcaag aagtcgacgg
      841 caatctcaac gtcactatgc tcaaacagcg gtagcccgga accgcttgat aaccccacgg
      901 tgaccagtac cgcgcggttt tctgctttca gctgctcaag ggtgagtgtg ttaccgactt
      961 cgttgttgca cttaatggtc acgcccattt tttcaatacg ggcgatctct gcatccagta
     1021 ctgattgcgg taaccggaat tgcggaatgc cgttacgcaa ccagccaccg ggttgtgctt
     1081 ctttctcata gatcgtgacg tcataaccct ggtttgtcag tgtcacactg gcctgcaatc
     1141 cggcaggacc tgcgccaata atcgcgactt tgccgagcgt tttagtaccg ggctgataaa
     1201 tttccatccc ggtttgttgt tcaaaatcag taacaaaacg ctgtaagcgg ccgatatcaa
     1261 tgggagcatc aacaccggca cgggtacaac cgctttggca taatttctcc gtcgggcaca
     1321 ctctggcaca aacggcaccg agggcattat tttcgcgaat tgtctcggca gcgcctttaa
     1381 aattacgaaa gtagattgag cgaataaatt tccccggatc ggtctgtgcc gggcaagcct
     1441 gactacaggg agcgtcgtga cataataaac agcgagaggc ttctttaatc gccagtaacg
     1501 gcgtaaaagc cggagtgagt tcatccagat aattttgttg cggcatgtga tcttccttaa
     1561 tgctatgagt aattaaggcg aacgctaaat atactcgtca tacttcaagt tgcatgtgct
     1621 gcgtctgcgg gttattcggc ccatccatgg gcctcacccc ttatggggcc gctgcaggca
     1681 gcgttcaaat ccgctccatg cggatttgtc gctcacccca gtcacttact tatgtaagct
     1741 cctggggact cactcacttg tcgccttcct gcaactcgaa ttatttagag tataaatatt
     1801 gcgtgctgat attaaggcta tgcgcgtggg gaaatttata ctgtgaaagg attcacaaat
     1861 agctgcggtt cagaatgtta tatccgcagc ttattgagtg aagtaataat tattctcaat
     1921 aattaacaga aaagagaaaa tattaacgat agaaaataag ataaacaatc atgccgatag
     1981 ataaaattcc gaagccgata tatgccacca tataagcgaa aaagagtccg ggattttttg
     2041 ctcgccagac atacaccggt tccggtgcat ttttaacccg tttatcaatc gcgcctgcgc
     2101 gccagccttt ccatgcttcg cggaaacaaa atatcggaat aaggaaaaaa acggcaacga
     2161 caaaaaactg ctgtacatcc ataactactt tccttgtttc ttttgtaatt caagtaactg
     2221 ttcgggtgtg acggcgggat acccctgcgc atcttccggc acctggtgca tagccggaat
     2281 agggaccagc ggccctaaaa aacgcggttc acgtttaaaa atataaaggt cagccagcgc
     2341 accgaaacgg gcggcaaatt cgcgaatacg tactgacagc atatctttcg gtgacggtac
     2401 ggcataacac tgagcctgaa tccccatatg cagcgcaata aataatgccc gctcacagtg
     2461 gaaacgttgg gtgataataa tgaaatcatt agtatcgaaa actttgcgtg tacgcacgat
     2521 ggaatccagc gtacgaaagc ctgcgtaatc gagaacaata tctgatgggt cgacaccagc
     2581 agcgattaaa tctttgcgca tggtcatcgg ctcattataa ctttgcaatg cgttatcgcc
     2641 gctcagtaat agataattta ccttaccgct gttataggca ttaatcgctc cttgaatgcg
     2701 gtagcgataa tactgattaa ttacgccagt acgataatat tttgctgttc cgagcaccac
     2761 accgacctgg cggtagggga gatcctgcaa ttcgtcgtag atataaggcg cggttttcca
     2821 gctcatccag cgatcgaggc cgagcacagt caacaacagc aagccgatca ggactaacag
     2881 gctgaggaac acgcgcttta acatgcagga gactcgatct aaggaaaatt tccatcaggc
     2941 tactttaccc gctggttttg cgcaagaaac ggcaaactgt ttgccgggaa tttcgacacc
     3001 aggagagggc tggcaagccg gacaaggcgt tcacgccgca tccggcacca ggcttaagcg
     3061 agaagcactc ggtcgatact gtgacagccg agagctttca gcgttgcgga ggtggcatcc
     3121 cactgaatca acggcgcatc ggctttttct gccagaaccg cgcgctggat atccgggtaa
     3181 tcataaccct tgagattcaa cagaattaac gctccctgca acggtggcag agtcgggttg
     3241 aatgcggcgt tttcagcgta gctgccactg aaaatacgac cgtctttaca ttccagcgcg
     3301 acaccgcttg gcgacttact gtaaggcatg tgcgaacggt ttgccgctgc aatcgccgcc
     3361 tgagaaagcg catcaccagt cagcgcatag ccgtgatcct gctcgtccat cagcagcgtt
     3421 ttaatctcca gatctttcgg cccaaaggca tccggcagat agtcacgcag cgcgtgtgcc
     3481 tcgcggcccg gcagatgaat acgcagatcc agaccgctgt tcagttcatt cataaactga
     3541 cggcagtgac cacaaggcgt gtagttaacg gtgatggctg caagcgcttt ttcaccactc
     3601 aaccaggcgt ggctgatcgc gctttgttcg gcatgaacgg tttgctgcat tgtcgcacca
     3661 ataaattcca tattggcacc gaaataccag gttccgctca caccgcgcgc aattgcgcca
     3721 acattaaaat tcgacaatgg cgtacgcgca caggccgctg ccagcggaag tagtgcgaat
     3781 gccagcgcgt cttcgtccag ccccgttgcg ctcttcagcg atgagacttg ctccccggtc
     3841 aacaaagcgg ggaagtactt gtctgccaga ataggttcca gtgcagattg caagttatcc
     3901 gcaagttggg caaaagcggt ttgaaaacgt ggatgcatgg cgttgcctca taatcatgta
     3961 atgggataac agtttacgaa cccgttatgg ctttatatgt gatctgaatc tcattaatta
     4021 tgcaacgcgt gaaacttaca tcaaaaatgc gcgacgcatc gcaaatttta gcccattact
     4081 gccagaataa tcgggaaaag gaacggtgcg atcagcgaag taattatccc gcataacacc
     4141 agcgctagcg aactaaatgc accttcctga taatccagct cggcgcagcg cgccgtaccg
     4201 agggcgtgcg aggcagtccc cattgccaga ccgcgcgcag ctttggtacg aatacgcatc
     4261 gcattaagca atgtatggcc aaataccgcg ccgaggatgc cgacgaaaat cacgcaaact
     4321 gcgctgattg ccggaatacc gccaatactg ccgccaaccg ccattgcaat aggcgtggtg
     4381 actgatttcg gcaggattga cgcggcgatt tccggtgaag cgcccatcaa caatgccacg
     4441 gaagtccccg tcaccatcgc aaccacgctg ccgataaaac agatggtgat gatcgatttc
     4501 cagcgcgcgc ggatctggtg tagctgctca tataaaggat aggccagcgc gacgaccgcc
     4561 ggttgcagca gatcgtttag cacttcgcta cctttaaagt agctgccgta agagatgccg
     4621 gtcagcatta aaaaagggat gatcaccacc attgctacca gcaacgggtt aagcaaggga
     4681 aacttatacc gtgccgccag tttgcgggcg gcaaaaaaga cgatcaatgt cagtggtaat
     4741 gaccaccaga tattagccat cattcttctg atcctttctg acctacgact ttacgttcac
     4801 cgtgcaccag ttgcgaactc cagctcacca ccagaaaaac caccagtgta ctgacagcac
     4861 aggaaaccac taccgggcca aactgtgcgc ggagcaaatc aaaatattgc atgacgccta
     4921 cgccaatcgg cacaaacaat agcgccatat agcgaatcag tacgtagcac cccggattga
     4981 cccattttgc cggaagaatt tgcaaggcca gcaggacaaa caggatcagc atcccgatga
     5041 tgctgcccgg aatggttacc ggtagcaggg aagcaatgaa aatgcctgca tacaggcagg
     5101 cataaatcag gacgaaagcg cgtaaatatt gccagataat gttcagtgtc ttactcataa
     5161 tcaacacccc agatgagatg aattcatcat acaattaatt cgtaaaacgt gctaccgatc
     5221 acattaagaa atcagcgctt attttttcgc tccccggcat tacgcaatgc gcaacgaact
     5281 caggcataca tcaagcatag agagggatta cagtttgcag caatccctct ttgcagacct
     5341 ttaatccgtt gaccataggc gctaacatag cgcctcattt ttttgcgggt gaagatatgc
     5401 gtgtgttact ggctccgatg gagggtgtgc ttgactctct ggtgcgtgaa ttgctgaccg
     5461 aagttaacga ctacgatctg tgcatcaccg agtttgtccg cgtggtggat caactgctgc
     5521 cggtaaaagt ttttcatcgc atttgccctg agctacaaaa cgccagccgg acaccatccg
     5581 gtacgctggt gcgcgtgcag ttgttgggtc agttcccaca atggctggca gagaatgccg
     5641 cccgtgcggt ggaattaggt tcctggggcg tggatctcaa ttgcggctgc ccgtcgaaaa
     5701 cggtcaacgg tagcggtggt ggggcgacgt tactcaaaga tcctgaactc atctaccagg
     5761 gtgcaaaagc gatgcgtgaa gctgtaccgg cgcatttgcc cgtcagcgtg aaagtgcgtc
     5821 tgggctggga cagcggtgag aagaaatttg aaatcgccga tgcggttcaa caggctggtg
     5881 ctacggagct ggtggtgcat ggacggacaa aagagcaggg ttaccgcgcg gagcatattg
     5941 actggcaggc gattggcgag attcgccagc ggctgaatat tccggtgatt gccaacggtg
     6001 aaatctggga ctggcagagt gcgcaacaat gtatggcgat cagcggctgc gacgcagtga
     6061 tgattggtcg cggggcgctc aatattccca acctgagccg ggtggtaaaa tataacgaac
     6121 cgcgaatgcc gtggccggag gtggttgctt tgctgcaaaa atatacccgt ctggaaaagc
     6181 agggcgatac cgggttatat cacgttgcgc ggattaaaca gtggttgagt tatttgcgta
     6241 aagaatacga tgaagcaacg gaattatttc agcatgttcg ggtgttgaat aattcccctg
     6301 atattgcaag ggctattcag gcaattgata tcgataagct gcgataatag tggaatcgca
     6361 gtttatcaga gacaatgaat cgcttattca gcttcatcat cttgttgcgc tcctttcatg
     6421 agctaagcca catattgcca ctggcgcaag gagcgcgcag ggggaggaca atcgcctcct
     6481 ccccctgccc cctgggctct ggcgaacaaa atcgccgctg cgcggtacct tcagcttatc
     6541 cccttcggct accgggtcgg gcgcgaggta acgtccttgt aagacgcgcc ctcagcccac
     6601 atccatgtgg gctgccccgg ccttcgggga acgcttcagc gattttgacg ccaccaacac
     6661 cggagctgtt tgcaaatcaa gtacacaaaa tatctagttc ctgacctgac aacttatatg
     6721 ccatatctga tttttaaaat atcatcttaa atacgccagt caccaccagt agcccaatca
     6781 ggaaaataat caatacagcc cagagtataa ttttcattgg cgttccttta tttgtgagtg
     6841 ttgaataagt ataggaaaaa acgaagccct ttgccgttat ccataaacga ttaagataaa
     6901 tcggaagata tcattcactt agtctatatt tttctgggta tgtcgtttta ttgctactga
     6961 tgtattgcca cgcgaaacta aaaaatatat cgcaacacac ggtaatctcc gcgcaccgtt
     7021 tcttacctga ttattccccc atgaatcgtg attcctttta tccagccatc gcctgttttc
     7081 cgctgttatt gatgctggcc gggtgtgcgc ctatgcatga aacccgccag gcgttaagcc
     7141 agcaaacgcc cgctgcacaa gttgacaccg cattacccac ggcgctgaaa aatggttggc
     7201 cagacagcca atggtggctg gagtatcacg ataatcagct cacttcatta attaacaatg
     7261 cactacagaa cgcaccggat atgcaggtgg ctgaacagcg cattcagcta gctgaagccc
     7321 aggcgaaggc agttgccact caggatggtc cgcagatcga cttttcggcg gatatggagc
     7381 ggcaaaaaat gtcggcagaa ggcttaatgg ggccgtttgc tctgaacgat ccggccgcag
     7441 gtacgaccgg cccgtggtac accaacggta cttttggctt aacggcgggc tggcatctcg
     7501 atatctgggg aaagaatcgg gcggaggtta ctgcccgcct gggtacggtt aaagcacggg
     7561 cggcggaacg cgagcaaacc cgccaattgc tggctggcag cgtagcccgc ctgtactggg
     7621 agtggca
//
LOCUS       DADMIB010000188         7472 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.190, whole genome shotgun sequence.
ACCESSION   DADMIB010000188 DADMIB010000000
VERSION     DADMIB010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7472
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.190"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..339
                     /locus_tag="JNZ89_003811"
     CDS             <1..339
                     /locus_tag="JNZ89_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY8937538.1"
                     /translation="QTEAFLNAYGLSRFAPLGYDPRDLPIRDLAGYRKKGNHDGDPII
                     FYTFPAAFEQEIAKGFNTKQFAEVLKNAGMLTPPTSGRGYQGRVREDGRQIRVYVLNF
                     MAEESSQPEE"
     gene            714..1148
                     /locus_tag="JNZ89_003812"
     CDS             714..1148
                     /locus_tag="JNZ89_003812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000126714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HAY8937539.1"
                     /translation="MTAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGE
                     STFWLGVIAFGKQADALAKHQKGDLVSVAGNMQLNQWTGQDGGTQQGYQVVADSVISA
                     RTVRPGGKAGQRGQATDALRRAQQPSRDEYDQRPPFDDETPF"
     gene            1159..1800
                     /locus_tag="JNZ89_003813"
     CDS             1159..1800
                     /locus_tag="JNZ89_003813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937540.1"
                     /translation="MSTQPIIIEFGSYRWPRHLAIHEADHAIAAWFFGIQEVEIALSG
                     NNRVAKTYLSGDVDECGAVAVWHANYPRNVAEVKSYTLSNDDTRLRLIDQVCRAMVIS
                     LAGIVAQSRYTGDDINALMETSGKADMKNVRDLSEVYRVAGGEDADIQRISLSRAEAL
                     IALKWWDVIALAKILENRNHMPASNFQRIMGDIDKPVPKPMTLAELDELVGEE"
     gene            1797..2147
                     /locus_tag="JNZ89_003814"
     CDS             1797..2147
                     /locus_tag="JNZ89_003814"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937541.1"
                     /translation="MKPYILAAGLISSAPALSAIHCGGFTIQPDRYRTTINGDVVHIV
                     DAQFYGAPRDFSQAAIKLLPDAITTTDRQYRIETQGGNALLELMTRENPPRVLNRERC
                     DAGLTSFGWYTSAP"
     gene            2841..3452
                     /locus_tag="JNZ89_003815"
     CDS             2841..3452
                     /locus_tag="JNZ89_003815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001205651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937542.1"
                     /translation="MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGT
                     LYAFRQADSYAMTINGVTRAIRTTTTKAGYGVREWYACPHCMKRAAKLYIGKKDIGCR
                     ACWKLHYKSQSADILDRMRMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFD
                     RKRAELSVMEMAYWQAFSPVVDRITGVIERKAGKAARGIGLTL"
     gene            3684..3869
                     /locus_tag="JNZ89_003816"
     CDS             3684..3869
                     /locus_tag="JNZ89_003816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937543.1"
                     /translation="MTPREIALLTIAKLEHGGHQLTQADQREIERSVNADIARRDRFR
                     EMMRAPAYQRKKPAPRR"
     gene            3990..4532
                     /locus_tag="JNZ89_003817"
     CDS             3990..4532
                     /locus_tag="JNZ89_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid pRiA4b ORF-3 family protein"
                     /protein_id="HAY8937544.1"
                     /translation="MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEH
                     LYMFEKGRKGDPGSEYRVWGEDESMGNAAITPLWAALQNDGDKLVYTYDFGDWWDCVI
                     VLEKQTHDTSNQPISCLRGKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLML
                     DIERRVYDLSSINDRLQTLN"
     gene            complement(4525..4884)
                     /locus_tag="JNZ89_003818"
     CDS             complement(4525..4884)
                     /locus_tag="JNZ89_003818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004202368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937545.1"
                     /translation="MRMTSRKKEILSYFEPDNLEWVTGEIGAPPFDVSGVAYLLHGMV
                     SFDKRHQLESTRRTLESMVAGGLLERVTVYESRQIRRGGETNATVVRYGLPGQCAVMR
                     DTGGADNAISGEYMRVS"
     gene            5318..6142
                     /gene="dinD"
                     /locus_tag="JNZ89_003819"
     CDS             5318..6142
                     /gene="dinD"
                     /locus_tag="JNZ89_003819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HAY8937546.1"
                     /translation="MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLA
                     RATQACEASNQAASDHFVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVI
                     AAGQTYFAIQTRRQELADDEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAI
                     DFAIFQNHGYRGLYGGLDQKAIHQRKGLKKNQNILDHMGSTELAANLFRATQTEEKLK
                     RDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK"
     gene            6434..7051
                     /locus_tag="JNZ89_003820"
     CDS             6434..7051
                     /locus_tag="JNZ89_003820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312548.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HAY8937547.1"
                     /translation="MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
                     SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
                     IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLY
                     IALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH"
     gene            complement(7048..7472)
                     /gene="ligB"
                     /locus_tag="JNZ89_003821"
                     /gene_synonym="yicF"
                     /pseudo
     CDS             complement(7048..7472)
                     /gene="ligB"
                     /locus_tag="JNZ89_003821"
                     /gene_synonym="yicF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312549.2"
                     /note="this ligase is similar to LigA but it lacks the
                     C-terminal BRCT domain; catalyzes strand joining of nicked
                     DNA in the presence of a divalent cation and NAD+;
                     internal stop; incomplete; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
BASE COUNT         2000 a         1834 c         1907 g         1731 t
ORIGIN      
        1 cagacggagg cgtttttgaa tgcctatggg ctgagtcgat tcgcgccgct gggttatgac
       61 ccgcgcgatt tacccatccg tgatttagcc gggtacagga agaaggggaa ccacgacggc
      121 gacccgataa ttttctacac cttcccggca gcgtttgagc aggagattgc aaagggcttc
      181 aataccaaac agtttgccga agttctaaag aatgcaggaa tgcttacacc accaacgagc
      241 gggcgaggct atcaggggcg agtaagggag gatgggcgac agattcgcgt ctatgtactc
      301 aatttcatgg cagaggaaag cagccagcca gaagaataat tatttcttca catgcgtagt
      361 tttagtgttg tctcggttgt ctttgttgtc tcaatttgta attaagattg atttataagg
      421 attttatttt aatttctgag acaacaccga gacaacattt agccattttg agacaacagg
      481 gcgaaagtgt gtttttagtc tggcaggcag tgagacaaca tttatgccgg gtgagacaac
      541 acgaaattgc aaatgttgtc tcagcaaaac ccagacgtgg cgcggcctgt agagccgtga
      601 gacaacaaag acaacagaga caacactatt tttgcttact atgaaaaaaa atcggcaggt
      661 gtcccacatt aagaaatcgt cattagcaaa actaataatc cagtgagggg aaaatgacag
      721 cacaaatttc agcatacggg cggctggtgg cagatcccca gacccgcacc acaacgaacg
      781 gtaacaacat ggctatggcg cggctggcgg tgtctctccc ctgtaatgcg gcagaggcgg
      841 gagagtcaac cttctggctg ggcgttattg cttttgggaa gcaggccgat gcgctggcaa
      901 agcaccagaa aggcgacctt gtgagcgtgg caggcaatat gcaactcaac cagtggacag
      961 ggcaggacgg cggtacacag caggggtatc aggtagtagc cgacagtgtg atcagcgcca
     1021 gaacggtacg ccccggcggg aaggcaggac agcggggaca ggcaacggac gcgctgagac
     1081 gtgcgcagca gccatcccgt gatgaatacg accaacgccc accattcgac gatgaaacgc
     1141 cattctgaga gggaagatat gagtacgcaa cccattatta ttgagttcgg cagctatcgc
     1201 tggcccagac atcttgcaat acatgaagca gatcatgcga tagccgcatg gtttttcggc
     1261 atacaggagg tagaaattgc gttatcgggt aataaccgag tggcaaaaac ctaccttagc
     1321 ggcgatgttg atgaatgtgg agctgtcgcg gtatggcacg ccaactatcc acggaatgtg
     1381 gctgaggtta agtcttacac cctctcgaat gatgacacca ggttacgtct gatagaccag
     1441 gtatgccggg ctatggttat ctctctggct ggtatcgtcg cgcaatcacg ctatacgggg
     1501 gatgatatta acgcactgat ggaaacgtcc gggaaagcag acatgaaaaa tgttcgtgat
     1561 ttatcagagg tataccgggt ggctggtggg gaggatgctg atatacagag aatatccctt
     1621 tcccgtgctg aggcgctgat tgccctgaaa tggtgggatg ttatcgcgct ggcgaaaata
     1681 ctggagaacc gtaaccatat gcctgccagc aacttccagc gcattatggg tgatattgac
     1741 aagcctgtac caaagcctat gacgctggct gaactggatg aattggtggg tgaagaatga
     1801 agccatacat tctggcagcc ggcctgatct cctcggcacc ggcactatct gctatccatt
     1861 gtgggggctt taccatacag ccagaccgtt atcggacaac gattaacggc gatgtggttc
     1921 atattgttga tgcgcaattt tacggcgcac cgcgagactt tagccaggcc gccataaagt
     1981 tattgccgga tgccattacc actaccgata ggcaataccg catagagacg cagggaggca
     2041 atgccttgct tgagttgatg accagagaaa acccgccacg tgtgcttaat cgtgagcgct
     2101 gcgatgccgg gttaacaagt ttcggttggt acacttctgc gccgtgatgt tcgttccgag
     2161 cgcagcctaa aatattggac tgttcttgac ggatttaaaa ctctaatgga gccaagtcct
     2221 tgccagtagc gggctaggag cctaattgtg attcaggtcg tcaaaaatat tcaggtttgc
     2281 ggcattggtt cgcagtacgc agtccggtac gcggcaaaac tgcgcattta acgtgcgtac
     2341 cacctgacga attctaacgc cggcattgca aacagatgcg tgcgcaaaat ggctaagacg
     2401 tctgatattg ctggctttgg ctcaatcagt ttggaggtgg cggtatcagt acgatgctaa
     2461 tttttgctaa ggttttagta cgcaactcag gtacgcactc tcaccagata cgaaaccgat
     2521 tcgcagttgc gtaccagcct gtaaggcgca ttatcgctgg gtttctacag tcgaatgcag
     2581 tacgcaaagt ggaaaatcct ccgaatacga aacccgagca ttgcgcagta aattgcgaat
     2641 tgcgcagtta acaaaatatc tccgcaaaac gaaacggata tcaatgcgca aaccatcctc
     2701 aacccccgcg cggttactgg ctttattgat gtgaaattgc aaaattggtg cgcaatttac
     2761 agtaaaatac gcatattatt tcgtattcaa tttgcgcacc gttcgcagtt aatgcgcagt
     2821 aattcgcagg aggccagcca gtgagagaca gaacgcgcag ctataccacc gacctgcccc
     2881 gtatagggtt gccattcctt gcgaacatgc gtagcaggct ggcggatgct gaaccgggta
     2941 cgcagcttta tacccagacc gaaagcggaa cgttgtatgc cttccggcaa gccgacagct
     3001 acgccatgac aatcaacggc gtgacgcggg ctattcgcac cacaaccacg aaggccgggt
     3061 atggcgtccg ggaatggtac gcttgccccc actgtatgaa gcgggctgca aagctgtata
     3121 tcggcaagaa agacattggc tgccgggcgt gctggaaact tcactataaa agccagagtg
     3181 ccgacatact ggacaggatg cgcatgaaga tacgccagca gcgatgcgcg atatggggca
     3241 gcaatgacct tgccaataat ctgtttaatg acattcgcat gttcccaaaa ccaaagggga
     3301 tgcgctgggc tacgtttgac aggaagcggg cagagttatc agttatggag atggcttact
     3361 ggcaggcatt cagcccggta gtggacagaa tcacgggcgt tattgagcgt aaagcaggaa
     3421 aagcagccag aggcattggc ctgactctat aaaagcaaaa cgcccgcacg gggcgtcaga
     3481 gaacgggata gacttctgcg acaatttgca ttcgccgcca atatagcaag ccgtccacat
     3541 caagcaataa actatcaccg ggagggggag gccaaatctc tgcaatcctg agccttaagg
     3601 actgcccgcc ccatcgtttt ttcatacccg cgaaaaatga aatttaatcc gggcgtgttt
     3661 catccttcca gagggtatga cgtatgacac cacgcgaaat agccttattg accatcgcca
     3721 aacttgagca tggaggccac cagcttacac aggcagatca acgggagata gaacgctcag
     3781 ttaatgccga tatagcccgg cgcgacaggt tccgcgaaat gatgcgagca cctgcctacc
     3841 agaggaagaa gccagcgccg cgcaggtaga tacgggatta ttccgcatgt aacttatgcg
     3901 tattaagcaa atttccttta ttcaccttta cagaattgtg agtacgtcag tatcgttatc
     3961 cttccgattc gcatttattc aggatttgca tgtaccagct aaagataacc atccgagaca
     4021 gcaaaccacc tatatggcgg cgtgtgctgg ttccagagca aatccccttt agtgaacttc
     4081 acgcggtgat ccagttggct tttggctgga atgacgaaca cctgtatatg ttcgagaaag
     4141 ggcgtaaagg tgatcccggt agcgagtatc gcgtatgggg tgaggatgaa agcatgggta
     4201 atgcggcaat cacaccacta tgggcagcgc tccagaatga tggtgacaag ctggtttaca
     4261 cgtatgactt tggcgactgg tgggattgcg tcattgtgct ggagaagcaa acacacgata
     4321 cgagcaatca gcccattagc tgcctgcgtg ggaaaggcac caccccggtg gaaaactcag
     4381 gcggcttgca tggttacaat gaattgctat tacaggccag agagtctgat aatcctgagc
     4441 aggccgagat ccacaatttc ctgatgctgg atattgagcg ccgggtttac gacctgagca
     4501 gcatcaacga cagattgcag actcttaact gacccgcata tattcgcctg atattgcgtt
     4561 atcagcgccg ccagtatcgc gcataacagc gcactgaccg ggcaaaccgt agcgcacgac
     4621 cgttgcgtta gtctcaccgc cgcgccgtat ctggcgcgat tcatacactg tcacccgctc
     4681 aagcagtcca ccagcaacca tgctttccag tgtgcgccgg gttgattcga gctggtgacg
     4741 cttatcgaac gacaccatgc catgaagcag gtaggccaca cccgacacat cgaacggcgg
     4801 cgcaccaatc tcaccagtca cccattcgag gttatccggt tcaaagtagc taagtatctc
     4861 ttttttgcgg ctggtcattc tcatagctgg caggttcctt attgtgggat agcactatca
     4921 tacaataagg cgcaaaagat aagaggccag aacagcaagc atgagagcat aaaacgagca
     4981 gccaaagaca gcgcctcaaa ataccgtgta cacaagggtg tacctactga gaaaacgcat
     5041 tacaagaaac acagcaacca cgggcgttta aagccactac tcaataaaca gattcaactc
     5101 gtaacgccaa ttcttacttt tcagccttca caaatgccgc ccactcaaac agagcggcat
     5161 ttttcttccc cgcaacttca attctgtttt gcgtgcctgc tccagatttt gcgatgtttt
     5221 tttgcccagc acactgagaa cgtgagatac tcacaactgt atataaatac agttacagat
     5281 ttactttctt tgcaatcgat atcacatgga gtgggcaatg aacgaacatc atcaaccttt
     5341 tgaagaaata cggcattatg gcactgaagg gcaagaattt tggtcagcta gagaattggc
     5401 accgttactg gattatcggg actggcgcaa ttttcaaaag gtactggccc gcgcgactca
     5461 agcgtgcgaa gccagcaatc aagctgcatc tgaccatttc gttgaaacca ccaaaatggt
     5521 tgtattaggt tcaggggctc aacgagaact tgaagatgtt catctctccc gctatgcctg
     5581 ttacctggta gtacaaaacg gcgaccctgc gaaaccggtt attgcggcag ggcaaactta
     5641 ttttgctatc cagacccgac ggcaggagct ggctgacgat gaagctttca ggcaacttcg
     5701 tgaagacgaa aagcgtcttt ttctgagaaa tgaattgaaa gaacataaca aacaattggt
     5761 tgaggcagcg cagcaagctg gggtagcgac agctatcgat ttcgccatat ttcagaatca
     5821 tggttaccgg gggctgtatg gtggattaga tcagaaagct attcatcagc ggaaggggct
     5881 gaaaaagaat cagaatatcc tggatcatat gggttcaaca gaactggcgg ctaatctctt
     5941 tcgagctacc caaacagaag aaaaactcaa gcgggatggc gtgaattcaa aacagcaagc
     6001 aaacaccaca cactttgacg tgggtcgcaa ggtgaggcaa accattcagg aacttggcgg
     6061 aaccatgcct gaggagttgc cgaccccgca ggtcagcatc aagcagttgg aaaacagtgt
     6121 aaaaattaca gagaagaaat agcagaaact aaaaactctt tttcttaatt gagatacccg
     6181 atgcgtaagc caaagtccag gtgcagtgaa cacaatggct aaacattgca cctttctttt
     6241 ccacccctca attttaacct attttttctt atgcattttc tcagacaaga actcagaata
     6301 atgcatctac gctacagaaa atagcgattt cacataacta caagttatca atttcctctt
     6361 accttaaaaa atctcaatcg tgacaatgcg cacaaatcgc taccctgcca gacagatttt
     6421 tagggagaga accatgctgt tacacatttt gtatttggtt ggcatcactg ccgaagccat
     6481 gacgggggcg ctggcggccg gacgacggcg catggataca tttggcgtaa ttattattgc
     6541 gaccgccacc gcaattggcg gagggtcagt gcgcgatatt ctgctgggcc actatccgct
     6601 cggctgggtc aaacacccgg aatatgtgat tatcgtcgct accgccgcag tactcaccac
     6661 tatcgttgct cctgtaatgc cttacctgcg caaagtgttt ctggtgctcg atgcgctcgg
     6721 actggtggtc ttttctatca tcggcgcaca ggttgcactg gatatggggc acggcccaat
     6781 tattgccgtt gtcgcggcgg taaccaccgg cgtgtttggc ggcgttttgc gcgatatgtt
     6841 ctgtaaacgc atcccactgg tattccagaa agagttgtat gctggtgtct catttgcctc
     6901 cgccgtgctg tacatcgcgc tgcaacacta tgtttctaac catgatgtgg tgattatctc
     6961 caccctggta ttcggctttt ttgcccgctt actggcgcta cgtcttaagc tgggattacc
     7021 ggtcttttac tacagccacg aaggtcacta aggttcaaaa cctgtgatct gctgggcagc
     7081 cagccaactg cccagcttct tgatttgcgc attttccttc cattcaataa cctgtctggc
     7141 gcgcccagat ccagtccccg gcagctgctg tcagaactgc tccgtgctaa ataaaagttg
     7201 cgactaggac cgttcatcac tggcattaag cgccgcccgg gttagcggta ttcccattgc
     7261 catcacccag cgagtaaaag gctgcttacg agccagatta aactgatgcc ataactgcgc
     7321 acttttactt ttcgcgatcc ccggcgtgtt ctgtaattgc tctggcgtta ataaaagcca
     7381 agaaaagata tgctcaaagc gatgagtctg atgcagcgcg cgccaaccgg cctcaccaat
     7441 gccatccagc ccaagaacct gttttgaccc ca
//
LOCUS       DADMIB010000189         7447 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.191, whole genome shotgun sequence.
ACCESSION   DADMIB010000189 DADMIB010000000
VERSION     DADMIB010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7447
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.191"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..1458
                     /locus_tag="JNZ89_003822"
                     /pseudo
     CDS             1..1458
                     /locus_tag="JNZ89_003822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709462.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            1469..2542
                     /locus_tag="JNZ89_003823"
     CDS             1469..2542
                     /locus_tag="JNZ89_003823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8937548.1"
                     /translation="MNKYIKQWCFAVFMLSLSSVALAAPKGICTPDNGVFHSTLDFSG
                     YLITANENKVGTTFNTTVTNGSSYPGRCHCDTGNVGEFPYIYYTSKINQALTYAGVHS
                     NINYYDLNPNLDVGIAIDILGVGYVNAPFEYHANNPSGNTKYNCNRIEPLSISSGAKA
                     IVYFYIKKTFAGKLIIPETKIVTLYGTISRDTPVDYSQPMADVYIRGDITAPQSCEIN
                     NLQPVYFDFKEIPAADFSSVVGSAVITHKITKTVTIECENLGILNTDDISTSFYATEP
                     NTDNSMVVTSNSNVGIKIYDKNNKEIKVNGGELPTDMGKSTVYGEKSGSVTFSAAPAS
                     LTGARPAPGQFTATATITVEIVR"
     gene            2790..3830
                     /gene="pstS"
                     /locus_tag="JNZ89_003824"
     CDS             2790..3830
                     /gene="pstS"
                     /locus_tag="JNZ89_003824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HAY8937549.1"
                     /translation="MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKW
                     ADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIG
                     GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRR
                     ADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGY
                     VEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWP
                     ITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWK
                     TNIKDSSGKPLY"
     gene            3917..4876
                     /gene="pstC"
                     /locus_tag="JNZ89_003825"
     CDS             3917..4876
                     /gene="pstC"
                     /locus_tag="JNZ89_003825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008806729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstC"
                     /protein_id="HAY8937550.1"
                     /translation="MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIIS
                     SWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
                     LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL
                     FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
                     VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
                     EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
     gene            4876..5766
                     /gene="pstA"
                     /locus_tag="JNZ89_003826"
     CDS             4876..5766
                     /gene="pstA"
                     /locus_tag="JNZ89_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HAY8937551.1"
                     /translation="MAMVEIQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFW
                     LIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGI
                     MAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL
                     ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAI
                     ARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIIT
                     LCVLLLNILARVVFAKNKHG"
     gene            5857..6630
                     /gene="pstB"
                     /locus_tag="JNZ89_003827"
     CDS             5857..6630
                     /gene="pstB"
                     /locus_tag="JNZ89_003827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HAY8937552.1"
                     /translation="MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGP
                     SGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTP
                     FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
                     RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
                     SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
     gene            6645..7370
                     /gene="phoU"
                     /locus_tag="JNZ89_003828"
     CDS             6645..7370
                     /gene="phoU"
                     /locus_tag="JNZ89_003828"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HAY8937553.1"
                     /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
                     NQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERI
                     GDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYRE
                     DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVK
                     GQDFRHVGGDELDKLLAGKDSDK"
BASE COUNT         1871 a         1723 c         1944 g         1909 t
ORIGIN      
        1 agatgttgat gtcagcgtgg gtgaattgcg cgatgaagac ggatttacac cggacgtcct
       61 tcaggcgcaa atacttcatg gtttttccca cgggatcact ttatatggag gtatgcaggc
      121 tgctgaaaat tatggttctg cagctctggg tgtcggtaaa gatcttggcg ctttgggcgc
      181 aatttctttc gatgtgacac atgctcgtgc gaattttagc catgatgata cagaaacggg
      241 tcagtcatat cgctttctct attcaaaacg atttgacgac acagacacta gcttgcgcct
      301 ggttggctat cgttactcca ccgagggcta ctataccctc aatgagtggg catcgcggcg
      361 caacagccct gaagactttt gggaaacagg taaccgacgt agtcgcgtgg agggaacgct
      421 aacgcagtcg ttggggagag attatggcaa tttatacctg acattaagcc ggcaacaata
      481 ctggcatacc gatgatgtcg aacgattaat gcaatttggc tacagcagta gctggaagcg
      541 tctctcgtgg aacgtctcct ggagttattc caatactgcc agacagggga cggggaacaa
      601 ccatgccagt gataacacca gtgagcagat ctacatgctc tctttatctg ttcctttatc
      661 gggctggtgg ggtaatagtt acgccaccta ttctgtttcg caaaacgata attccggtag
      721 ctcacatcaa gcggtacggc gctggaaaga aataaccttt catggaattt aatgcagtcc
      781 tataacagtc atgatgatga ggttggcggt aatatgtccc tgacctatga tggctcttat
      841 ggcacggtga acggcagcta taactacagc caaaattccc agaggctgaa ttatggtatc
      901 agagggggaa ttctggcaca cagcgaaggg gtaacgttaa gtcaggagtt aggtgaaact
      961 attgctcttg ttaaagcacc tggggccgcc gggttagaaa tagataatat gcgcggtgct
     1021 gcgacggact ggcgcggcta tacggtcaag acacagctaa acccttatga tgaaaatcgg
     1081 gtagcaatca gcgataacta tttctcgaag tcgaatatag aacttgataa taccgtcgtt
     1141 acgatggttc ccacgcgtgg tgcagtggtt aaagcggagt ttgtgactca tgtgggttat
     1201 cgcgttctct tcagagtgtt aaatgcaaat ggtaaaccgg taccttttgg agccattgct
     1261 gcgatacaag atgcaagttt ggcagattca ggaattgtcg gtgaccgtgg cgaactttat
     1321 ctttctggtc taccagaaaa aggacaggtt acgttatcct ggggagaaaa cgcctcaaca
     1381 aaatgcatct tcaattattc actttcgaca ccagaaagtg agagcggatt aattgaacag
     1441 ggtgtgacat gtcattaaaa ggatttttat gaacaagtat atcaaacagt ggtgctttgc
     1501 tgtgtttatg ctctcgttaa gtagtgtagc acttgcagct cctaaaggta tctgtacccc
     1561 tgataatggc gtatttcaca gtacgcttga tttctcggga tatcttatta ccgcgaacga
     1621 aaataaggtt ggaacgacat ttaacaccac tgtaactaat ggatcctcat atcctggacg
     1681 ctgtcattgt gatactggta acgtaggaga attcccctat atctattata cgtcaaaaat
     1741 aaaccaggca ttaacttatg ctggggttca ctctaatatt aattattatg atcttaatcc
     1801 gaaccttgat gttgggattg ctatagatat tcttggggtt gggtatgtga atgcaccttt
     1861 tgaatatcat gctaacaacc cgtctggtaa tacaaagtac aattgcaacc gcattgaacc
     1921 tttaagtata tctagtgggg ctaaagcgat agtatatttt tatatcaaga agacatttgc
     1981 aggaaaattg attattcctg aaacaaagat agtgacattg tatggaacaa ttagccgtga
     2041 caccccggtg gattactcac agccgatggc tgatgtttat attcggggcg atattacagc
     2101 tccgcaaagt tgcgaaataa ataatttaca gccagtttat tttgatttta aagaaatacc
     2161 agctgcagat ttttcatctg ttgttggaag tgcggtaata acacataaaa ttactaaaac
     2221 ggtcactatt gagtgtgaaa acctggggat actgaatacc gatgatatca gtacgtcttt
     2281 ttatgctacc gaacccaata cggacaattc aatggtcgta acttcaaact ctaacgtggg
     2341 gataaaaatt tacgacaaaa ataataagga aatcaaagtg aacggtggtg agttgccaac
     2401 agacatgggt aaatcaacag tgtatggtga aaaatcaggt agtgtaactt tttcagctgc
     2461 tcctgcgagc cttactggag ctcgcccagc cccggggcaa tttactgcaa cagcgacgat
     2521 aactgttgag attgtgcgct aataggtctg acaacgattg ttcatcacat cgttgtcatc
     2581 tcacccattt ctttatcact tttaaatgca tcatgacaaa aagatgacat gtgggatttt
     2641 catcttcaca tttaaaatca gtaagttatt tggtaattcc tttctgtcat aaaaatgtca
     2701 tattccttac atataactgt cacctgtttg tcctattttg cttctcgtag ccaacaaaca
     2761 atgctttatg aatcctccca ggagacatta tgaaagttat gcgtaccacc gtcgcaactg
     2821 ttgtcgccgc gaccttatcg atgagcgctt tctctgtgtt tgcagaagca agcctgacag
     2881 gtgcaggtgc aaccttccct gcgccggtgt atgccaaatg ggctgacact taccagaaag
     2941 aaaccggtaa taaagttaac taccagggta tcggttcttc cggtggcgta aaacagatta
     3001 tcgctaatac cgttgatttt ggtgcctctg acgcgccgct gtctgacgaa aaactggctc
     3061 aggaaggtct gttccagttc ccgaccgtga ttggcggcgt ggtgctggcg gttaacattc
     3121 cagggctgaa gtctggcgaa ctggtgctgg atggtaaaac cctcggcgac atctacctgg
     3181 gcaaaatcaa gaagtgggat gatgaagcca tcgccaaact gaatccgggt ctgaaactgc
     3241 cttcacaaaa cattgctgta gtacgccgcg cagatggctc cgggacttcc ttcgtcttca
     3301 ccagctacct ggcgaaagtg aacgaagagt ggaaaaacaa cgttggtact ggctctaccg
     3361 taaaatggcc gatcggtctg ggcggtaaag gtaacgacgg tatcgccgcg ttcgttcagc
     3421 gtctgccggg tgcaattggt tatgttgaat atgcttacgc gaagcagaac aacctggcgt
     3481 acaccaaact gatctccgct gatggtaaac cggttagtcc gaccgaagaa aacttcgcta
     3541 atgcagcaaa aggtgcagac tggagcaaaa ccttcgctca ggatctgacc aaccagaaag
     3601 gcgaagatgc atggcctatt acctctacca cgttcattct gatccacaaa gatcagaaga
     3661 aaccagaaca aggcacagaa gtgctaaaat tcttcgactg ggcgtacaaa accggggcta
     3721 aacaggcgaa cgacctggat tacgccagcc tgccggatag tgtagttgaa caggttcgcg
     3781 ctgcgtggaa gaccaatatt aaagacagta gcggtaagcc gctgtactaa taaaactcca
     3841 ggccgggtac ggtgttttac gccgcatccg gcattacaaa atgactttgt aaacgcgttt
     3901 aactgaagag taacttatgg ctgcaaccaa gcctgctttt aacccaccgg gtaaaaaggg
     3961 cgacataatt ttcagcgtgc tggtaaaact ggcggcgctg attgtgctat tgatgttggg
     4021 tggcattatt gtctctctga tcatctcctc ctggccgagc attcagaaat ttggtctggc
     4081 tttcctatgg accaaagagt gggatgcacc gaacgatatc tacggggcgc tggtgccgat
     4141 ctacggtacg ttggtgactt cgtttatcgc gctgctgatc gccgtcccgg tgagtttcgg
     4201 tatcgccctg ttcctgactg agcttgcgcc tggctggctg aaacgcccgc tgggtatcgc
     4261 cattgagctg ctggcagcca ttccaagtat cgtttacggc atgtggggcc tgtttatctt
     4321 tgcgccgctg ttcgccgttt actttcagga gccggtcggc aatatcatgt cgaatatccc
     4381 gattgttggc gcgctgttct ctggccccgc atttggtatc ggtatcctcg cggcaggcgt
     4441 gatcctcgcc atcatgatta ttccgtacat tgcggcggta atgcgtgatg tgttcgaaca
     4501 aaccccggtg atgatgaaag agtcggccta cggtattggc tgcaccacct gggaagttat
     4561 ctggcgtatc gttcttccgt tcaccaaaaa tggtgttatc ggcggcatca tgctggggct
     4621 gggccgcgcg ctcggtgaaa ccatggcggt gacctttatc atcggtaaca cctaccagct
     4681 cgacagcgcc tcgctgtaca tgccgggcaa tagtatcacc tctgcgttgg cgaacgaatt
     4741 tgcggaagcg gaatccggtc tgcacgttgc cgcactgatg gaactgggcc tgatcctgtt
     4801 tgtgattacc ttcatcgtcc tcgccgcatc gaagtttatg attatgcgcc tggctaagaa
     4861 tgagggggca cgctaatggc tatggttgaa atccaaacca ctgcggcgct ggctgaatct
     4921 cgccgcaaaa tgcaggcgcg tcgccgcctc aaaaaccgta ttgcgctgac gctctcgatg
     4981 gcgacgatgg ccttcggcct gttctggctg atctggattt taatgtccac catcactcgc
     5041 ggtatcgacg gtatgtcgct ggcgctgttc actgaaatga cgccgccgcc caatacggaa
     5101 ggtggtggtc tggcgaacgc cctggcgggt agcgggctgt taattttgtg ggccacggta
     5161 ttcggtacgc cgctgggcat tatggcgggg atttatctgg cggaatatgg tcgtaaatcc
     5221 tggctggcag aagtgattcg cttcattaac gacattctgc tctccgcgcc gtcgattgtg
     5281 gttggtctgt ttgtttacac catcgtggtg gcgcagatgg agcacttctc tggctgggcg
     5341 ggcgtgattg ccctggcgct gttgcaggtg ccgattgtta tccgcaccac cgagaacatg
     5401 ctgaaactgg tgccggacag cctgcgtgaa gcggcttatg cgctgggtac accgaagtgg
     5461 aagatgatct ctgcgattac gctgaaagcg tcggtgtccg ggatcatgac cggtatcctg
     5521 ctggcgattg cccgtattgc tggtgaaacc gcgccgctgc tgtttaccgc gctctccaac
     5581 cagttctgga gcacggacat gatgcagccg atcgccaacc tgccggtgac gatctttaag
     5641 tttgcgatga gcccgtttgc ggaatggcaa caactggcct gggccggggt attgattatt
     5701 accctgtgcg tactgctgct gaacattcta gcgcgcgttg tttttgcgaa gaataaacac
     5761 ggttaacact ttgccggatg cggcgtgaac gccttatccg gcctacggta agcctgatta
     5821 gcgaagtgca tcaggcacga tgaggaaaag attgcaatga gtatggttga aactgccccg
     5881 agtaaaattc aggttcgtaa tttgaacttc tactacggca aattccatgc cctgaaaaac
     5941 atcaacctgg atatcgctaa aaaccaggtt acggcgttta tcgggccgtc cggctgcggt
     6001 aaatcgacgc tgctgcgtac cttcaacaaa atgtttgaac tgtacccgga gcagcgtgcg
     6061 gaaggtgaaa ttctgcttga tggcgacaac atcctgacca actctcagga tatcgcactg
     6121 ctgcgtgcga aagtgggcat ggtgttccag aaaccgacgc cgtttccgat gtccatctac
     6181 gacaacatcg cttttggcgt tcgtctgttt gagaagctct cccgtgccga catggacgag
     6241 cgcgtgcagt gggcattgac caaagccgca ttgtggaacg aaaccaaaga taaattgcac
     6301 cagagcggtt actctctctc tggtggtcag caacagcgtc tgtgtattgc gcgtggtatc
     6361 gccattcgcc cggaagtgct gctgctcgac gaaccgtgtt cggcgctcga ccctatctct
     6421 accgggcgta ttgaagagct gatcaccgaa ctgaagcagg attacaccgt ggtgatcgtc
     6481 acccacaaca tgcagcaggc tgcgcgttgt tccgaccaca cggcgtttat gtacctgggc
     6541 gaattgattg agttcagcaa cacggacgat ctgttcacca agccagcgaa gaaacaaaca
     6601 gaagactaca tcaccggtcg ttacggttga ttcaggagtg cgttatggac agtctcaatc
     6661 ttaataaaca tatttccggc cagttcaacg ccgaactgga aagtatccgc acgcaggtga
     6721 tgaccatggg cggcatggtg gagcagcagc tttctgatgc aatcaccgcg atgcataacc
     6781 aggacagcga tctggcgaag cgcgtgatcg aaggcgacaa gaacgtcaac atgatggaag
     6841 tggcgatcga tgaagcctgc gtgcgcatta tcgccaaacg tcagccgacg gcgagcgacc
     6901 tgcgactggt tatggtgatc agtaaaacca ttgccgagct ggagcgtatt ggcgacgtgg
     6961 cggacaaaat ctgccgtact gcgctggaga aattctccca gcagcatcag ccgttgctgg
     7021 taagtctgga gtcgctgggc cgtcatacca tccagatgct gcacgacgtg ctggacgcgt
     7081 tcgcgcggat ggacattgac gaagcggtac gtatttatcg tgaagataaa aaagtcgatc
     7141 aggaatacga aggtattgtt cgtcaactga tgacctacat gatggaagat tcgcgtacca
     7201 ttccgagcgt acttactgcg ctgttctgcg cgcgttctat cgaacgtatt ggcgaccgct
     7261 gccagaatat ttgtgagttt atcttctact acgtgaaggg gcaggatttc cgtcatgtag
     7321 gcggtgatga gctggataaa ctgctggcgg gaaaagatag cgacaaataa ttcaccagac
     7381 aaatcccaat aacttaatta ttgggatttg tggtaatgct gccaacttac tgatttagtg
     7441 tatgatg
//
LOCUS       DADMIB010000190         7437 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.192, whole genome shotgun sequence.
ACCESSION   DADMIB010000190 DADMIB010000000
VERSION     DADMIB010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7437
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.192"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            157..765
                     /locus_tag="JNZ89_003829"
     CDS             157..765
                     /locus_tag="JNZ89_003829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HAY8937554.1"
                     /translation="MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFN
                     PLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMD
                     AGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC
                     AVGYLNFRRVAPGWCVDRPHLVKLVENLFSRESFARTEPPKA"
     gene            863..2254
                     /gene="selA"
                     /locus_tag="JNZ89_003830"
     CDS             863..2254
                     /gene="selA"
                     /locus_tag="JNZ89_003830"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HAY8937555.1"
                     /translation="MTTETRSLYSQLPAIDRLLHDSSFLSLRDTYGHTRVVELLRQML
                     DEAREVIRDSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAE
                     AAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLM
                     LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNEN
                     TALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEP
                     MPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAAL
                     EATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLS
                     QIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRC
                     LEDEQRFLEMLLK"
     gene            2251..4095
                     /gene="selB"
                     /locus_tag="JNZ89_003831"
     CDS             2251..4095
                     /gene="selB"
                     /locus_tag="JNZ89_003831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HAY8937556.1"
                     /translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
                     WPQPDGRVPSFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLT
                     GNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREH
                     LLQLPGREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRV
                     RALHAQNQPTETAHAGQRIALNIAGDAEKEQINRGDWLLADAPPEPFTRVIVELQTHT
                     PLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAG
                     ARVVMLNPPRRGKRKPEYLQWLASLARAQNDSEALAVHLQRGAVNLPDFAWARQLNGE
                     GMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMAL
                     PMEDEALVLLLIEKMRESGDILSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFSDEPWW
                     VRDLAKETGTDEQAMRLTLSQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGS
                     TCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK"
     gene            4285..5436
                     /gene="yiaY"
                     /locus_tag="JNZ89_003832"
     CDS             4285..5436
                     /gene="yiaY"
                     /locus_tag="JNZ89_003832"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine dehydrogenase"
                     /protein_id="HAY8937557.1"
                     /translation="MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDSMLTK
                     LGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHD
                     CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIK
                     MAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
                     AVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAYQLGGFYNLP
                     HGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKV
                     DIPAGLRDLNVKEEDFAVLATNALKDACGFTNPIQATHEEIVAIYRAAM"
     gene            5601..7139
                     /locus_tag="JNZ89_003833"
     CDS             5601..7139
                     /locus_tag="JNZ89_003833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY8937558.1"
                     /translation="MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQN
                     LTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLE
                     LLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
                     LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGV
                     VNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
                     FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
                     RSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLE
                     PTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYK
                     MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
                     LGLF"
BASE COUNT         1769 a         1848 c         2079 g         1741 t
ORIGIN      
        1 aagtgagata tccatcagag tgaaataatt aggaaaatat ttatatcacc atgataaata
       61 tgtgatttat ttggaagtaa caaaccatca acattttctg ccctttttcc catcaccagg
      121 ccatactgat atttttcctc gcacaaagga ctcggcatga aactcgtcgg tagctacacc
      181 agcccgtttg tacgcaaact ttctattctg ttgttagaaa agggcataac tttcgaattt
      241 attaatgaac tgccctataa cgcggacaac ggcgtggcgc aatttaaccc gttaggaaaa
      301 gtgccggtgc tggtgaccga agagggcgaa tgctggtttg attcgccgat catcgctgaa
      361 tatattgagt taatgaatgt cgctccggcg atgttgccgc gcgatccgct ggagtcgttg
      421 cgggtgcgca aaattgaggc gctggcggat ggcattatgg atgccgggct ggtatcggtg
      481 cgtgaacagg cgcgtccggc ggcgcagcag tctgaagatg aattgttacg ccagcgggag
      541 aaaatcaacc gcagtctgga tgtgctggaa ggatatctgg tcgatggcac actcaaaacc
      601 gatacggtca atctggcgac tatcgccatt gcctgtgctg tcggatatct caatttccgc
      661 cgcgttgcgc caggttggtg tgtcgaccgc ccacacttag tcaaactggt cgaaaacctg
      721 tttagccgcg aaagttttgc tcgcaccgaa ccgccaaagg cttgatgcgc gatatgtcct
      781 cctgacccat ctcacgttac aatccgtggt tatgttaaac gcccttctcc atgtgagagg
      841 gccttgatta gccaggtttc ctatgacaac cgaaacgcgt tccctctata gtcaacttcc
      901 ggctattgat cgcttattgc acgatagctc cttcctttct ttgcgtgata cttatggtca
      961 cacccgcgtg gtggaattgt tgcgtcagat gctcgacgaa gcgcgagaag tgattcgtga
     1021 cagccagacg cttcctgcgt ggtgtgaaaa ctgggcgcaa gaagtcgatg cccggttgac
     1081 gaaagaggcg cagagcgcgc tgcgtccggt gatcaacctg acgggaaccg tgctgcatac
     1141 caaccttgga cgagctttac aggcggaagc cgcggtggaa gccgttgcgc aggctatgcg
     1201 ttcgccagtg accctcgagt acgatctgga cgacgctgga cgcggacatc gcgatcgggc
     1261 gctggcgcaa ctgctgtgcc gtattacggg ggcggaagat gcctgtatcg tcaataacaa
     1321 tgcggcggcg gtgttattga tgttggcggc cactgccagc gggaaagagg tggtagtatc
     1381 tcgcggcgaa ttggtggaga ttggcggcgc gtttcgtatt cccgatgtta tgcgtcaggc
     1441 aggctgcacc ctacacgaag tagggaccac caaccgcacg cacgcgaatg attatcgtca
     1501 ggcggtgaat gaaaataccg cactgttgat gaaagtacat accagtaact acagcattca
     1561 ggggttcacc aaagcgatag atgaagcgga actggtggcg ctcggcaaag agctggatgt
     1621 tcccgtagtg actgatttag gcagtggctc gctggtcgat cttagccagt acggtttgcc
     1681 gaaagagcca atgccgcagg agttgattgc ggcgggcgtc agtctggtga gcttctccgg
     1741 cgacaagttg ttaggcgggc cgcaggcagg gattatcgtt ggtaaaaaag agatgatcgc
     1801 ccgcctgcaa agccacccgc tgaagcgtgc attacgcgcg gataaaatga ccctcgcggc
     1861 gctggaagcc acgttgcgtc tttatttaca ccctgaagct ctgagtgaaa aattaccgac
     1921 cctgcgcctg cttacccgca gcgcagaggt cattcaaatc caggcacaac gtttacaggc
     1981 tccccttgcc gcacattacg gcgcggagtt tgcggtacag gttatgccat gtctttcgca
     2041 gattggcagt ggttcgctgc cggttgatcg cctgccgagc gcggcattaa cgtttacacc
     2101 ccatgatgga cgcggtagcc accttgagtc attagccgcc cgctggcgtg aattgccagt
     2161 gccggtgatt ggtcgtattt atgacggacg attgtggctg gatttacgct gccttgaaga
     2221 tgagcaacgg tttttggaga tgttgttgaa atgattattg cgactgccgg acacgttgac
     2281 cacggcaaaa caaccttatt gcaggcgatt actggcgtaa atgctgaccg tctgccggaa
     2341 gaaaaaaagc gcggcatgac catcgatctc ggctatgcct actggccgca gccggatggt
     2401 cgcgtgccta gttttatcga cgtacccggt catgaaaagt ttctttccaa catgctggcg
     2461 ggcgttggtg gtatcgatca cgcgctgttg gtggtggcgt gcgatgacgg cgtgatggcg
     2521 cagacccgtg agcatctggc gattttgcag ctgaccggta acccgatgct gacagtggcg
     2581 ctgaccaagg ccgatcgcgt ggacgaagcg cgtgttgatg aggttgaacg ccaggtaaag
     2641 gaggtgctgc gggaatacgg ttttgctgag gcaaaactgt ttatcaccgc agcaaccgaa
     2701 ggtcggggaa ttgatgccct gcgcgagcat ctgcttcagt taccaggacg tgaacacgcc
     2761 agccaacata gtttccgcct cgcgatcgac cgcgcattta ccgtaaaagg tgccgggctg
     2821 gtcgtcaccg gtacggcgtt aagcggggaa gtgaaggtag gcgattcact ctggctgact
     2881 ggtgtaaata aaccgatgcg tgtacgtgcg ctgcatgcac aaaaccagcc aacagaaacc
     2941 gcccatgccg ggcagcgtat cgcgcttaac atcgcgggtg atgcggaaaa agagcagatt
     3001 aaccgtggcg actggctgct tgccgatgcg ccgccagagc cgttcacacg ggtgattgtc
     3061 gagcttcaaa cccatacacc gctgacccag tggcagccgc tgcatattca ccacgccgcc
     3121 agccacgtca cgggacgcgt ttcactgctg gaagataacc ttgctgaact ggtcttcgac
     3181 accccgttat ggctggcaga taacgaccgc ctggtattgc gcgatatctc tgcccgcaac
     3241 acgctggccg gagcgcgcgt cgtgatgctt aacccgccgc gtcgcggtaa acgtaaacca
     3301 gagtatctgc aatggctggc ttccctcgcc agggcacaga atgatagcga agcgttagcc
     3361 gttcacctgc aacgcggcgc ggttaatctt cctgatttcg cctgggcgcg ccagctcaac
     3421 ggcgaaggga tgcgcgaact gctgcaacag cctggctata ttcaggctgg ttatagcttg
     3481 ttgaatgcgc cggttgccgc tcgctggcaa cggaaaattc tcgacacatt agcgacttat
     3541 catgagcaac atcgcgatga acctgggcct gggcgcgaac gtctgcgacg tatggcgttg
     3601 ccaatggaag atgaagcgct agtactgttg ctgattgaaa agatgcgcga aagcggcgac
     3661 atcctcagtc atcacggttg gctgcatctg ccggatcaca aagcgggctt cagcgaagag
     3721 cagcaggcca tctggcaaaa agcagagccg ctgtttagtg acgagccgtg gtgggtgcgt
     3781 gatctggcaa aagagacggg taccgacgag caggcaatgc gcttgacgct aagccaggcg
     3841 gcgcagcaag gaataattac cgcgatcgtc aaagatcgtt attaccgtaa cgatcggatt
     3901 gtcgaatttg ccaatatgat ccgcgatctc gatcaggagt gtggttcaac ctgcgcggcg
     3961 gatttccgcg atcgcttagg cgtaggccga aagctggcaa ttcagattct ggaatatttt
     4021 gaccgcattg gctttacgcg tcgtcgtgga aatgatcatt tattgcgcga cgcattatta
     4081 tttccggaaa aataaggaaa tgattaatta atttttaaaa taaattaata caaatttctt
     4141 atgattttaa aaaaagcaca ttgtttaatg aatacaatgt gctttttatt agattaattt
     4201 tgataattaa taataatgat catgttttcg aatgaaaatc ctcagtaagc ttcccaccct
     4261 tttttacact ttcaggagtg tgttatggca tcttcaactt tctttattcc ttctgtgaat
     4321 gtcatcggcg ctgattcatt gactgatgca atgaatatga tggcagatta tggatttacc
     4381 cgtaccttaa ttgtcactga cagtatgtta acgaaattag gtatggcggg cgatgtgcaa
     4441 aaagcactgg aagaacgcaa tatttttagc gttatttatg atggcaccca acctaacccc
     4501 accacggaaa acgtcgccgc aggtttgaaa ttacttaaag agaataattg cgatagcgtg
     4561 atctccttag gcggtggttc tccacacgac tgcgcaaaag gtattgcgct ggtggcagcc
     4621 aatggcggcg atattcgcga ttacgaaggc gttgaccgct ctgcaaaacc gcagctgccg
     4681 atgatcgcca tcaacaccac tgcgggtacg gcctctgaaa tgacccgttt ctgcatcatc
     4741 actgacgaag cgcgtcatat caaaatggcg attgttgata aacatgtcac tccgctgctt
     4801 tctgtcaatg actcctctct gatgattggt atgccgaagt cactgaccgc cgcaacgggt
     4861 atggatgcct taacgcacgc tatcgaagca tatgtttcta ttgccgccac gccgatcact
     4921 gacgcttgtg cactgaaagc cgtgaccatg attgccgaaa acctgccgtt agccgttgaa
     4981 gatggcagta atgcgaaagc gcgtgaagca atggcttatg cccagttcct tgccggtatg
     5041 gcgttcaata atgcttctct gggttatgtt catgcgatgg cgtaccagct gggcggtttc
     5101 tacaacctgc cacacggtgt atgtaacgcc gttctgctgc cccatgttca ggtattcaac
     5161 agcaaagtcg ccgctgcacg tctgcgtgac tgtgccgctg caatgggcgt gaacgtgaca
     5221 ggtaaaaacg acgcggaagg tgctgaagcc tgcattaacg ccatccgtga actggcgaag
     5281 aaagtggata tcccggcagg cctacgcgac ctgaacgtga aagaagaaga tttcgcggtt
     5341 ctggcgacta atgccctgaa agatgcctgt ggttttacta acccgatcca ggcaactcac
     5401 gaagaaattg tggcgattta tcgcgcagcg atgtaatcat catttccaca acggctggca
     5461 aattgtcagc cgctttttca actatctctg taacccttgc ccgtaaattc gtgatagccg
     5521 tcgtaaagct gttaccgact ggcgaagatt tcgccagtca cgtctaccct tgttatacct
     5581 cacaccgcaa ggagacgatc atgaccaata atcccccttc agcacagatt aagcccggcg
     5641 agtatggttt ccccctcaag ttaaaagccc gctatgacaa ctttattggc ggcgaatggg
     5701 tagcccctgc cgatggtgag tattaccaga acctgacgcc ggtgactggg cagctgctgt
     5761 gcgaagtggc gtcttcgggc aaacgagaca tcgatctggc gctagatgct gcgcacaaag
     5821 tgaaagataa atgggcgcac acctcggtgc aggatcgcgc ggcgattctg tttaagattg
     5881 ccgatcgaat ggaacaaaac ctcgagctgt tagcgacagc tgaaacctgg gataacggca
     5941 aacccattcg cgaaaccagt gctgccgacg tgccgctggc gattgatcat tttcgctatt
     6001 tcgcctcgtg tattcgggcg caggaaggtg ggatcagtga agttgatagc gaaaccgtgg
     6061 cctatcattt ccatgaaccg ttaggcgtgg tggggcagat tatcccgtgg aacttcccgc
     6121 tgctgatggc gagctggaaa atggctcccg cgctggcggc gggcaactgt gtggtgctga
     6181 aacccgcacg tcttaccccg ctttctgtac tgctgctaat ggaaattgtc ggtgatttac
     6241 tgccgccggg cgtggtgaac gtggtcaatg gcgcaggtgg ggaaattggc gaatatctgg
     6301 cgacctcgaa acgcatcgcc aaagtagcgt ttaccggctc aacggaagtg ggccaacaaa
     6361 ttatgcaata cgcaacgcaa aacattattc cggtgacgct ggagttgggc ggtaagtcgc
     6421 caaatatctt ctttgctgat gtgatggatg aagaagatgc ctttttcgat aaagcgctgg
     6481 aaggctttgc actgtttgcc tttaaccagg gcgaagtttg cacctgtccg agtcgtgctt
     6541 tagtgcagga atctatctac gaacgcttta tggaacgcgc catccgccgt gtcgaaagca
     6601 ttcgtagcgg taacccgctc gacagcgtga cgcaaatggg cgcgcaggtt tctcacgggc
     6661 aactggaaac catcctcaac tacattgata tcggtaaaaa agagggcgct gacgtgctca
     6721 caggcgggcg gcgcaagctg ctggaaggtg aactgaaaga cggctactac ctcgaaccga
     6781 cgattctgtt tggtcagaac aatatgcggg tgttccagga ggagattttt ggcccggtgc
     6841 tggcggtgac caccttcaaa acgatggaag aagcgctgga gctggcgaac gatacgcaat
     6901 atggcctggg cgcgggcgtc tggagccgca acggtaatct ggcctataag atggggcgcg
     6961 gcatacaggc tgggcgcgtg tggaccaact gttatcacgc ttacccggca catgcggcgt
     7021 ttggtggcta caaacaatca ggtatcggtc gcgaaaccca caagatgatg ctggagcatt
     7081 accagcaaac caagtgcctg ctggtgagct actcggataa accgttgggg ctgttctgat
     7141 ataagaagct ggtcgcattg ggtattcatt gcctgatgtg acgcttacgc gtcttatcat
     7201 gcctacggga acctgaccgt aggccggata aggcgtacac gccgcatccg gcataaacaa
     7261 agcgcacgtt gttacaattt acgttttaaa cctacgtgcg caataatcca gactacgcca
     7321 acagaagtgc gtttctgggg cgtgttttgt caggagttta atctcgcgtt tcgatggtga
     7381 gcgggcgaac taggccgtaa atcaccattg gtgatccgag gccaatcagc aataaac
//
LOCUS       DADMIB010000191         7435 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.193, whole genome shotgun sequence.
ACCESSION   DADMIB010000191 DADMIB010000000
VERSION     DADMIB010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7435
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.193"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            167..274
                     /locus_tag="JNZ89_003834"
     CDS             167..274
                     /locus_tag="JNZ89_003834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588455.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937559.1"
                     /translation="MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG"
     gene            complement(327..1085)
                     /locus_tag="JNZ89_003835"
     CDS             complement(327..1085)
                     /locus_tag="JNZ89_003835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiY family protein"
                     /protein_id="HAY8937560.1"
                     /translation="MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFE
                     GNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGG
                     RSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
                     DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHF
                     GLKVTYNVTWNSEPPESAPEHTDRRTTLSLGYSM"
     gene            1372..2301
                     /gene="pfkB"
                     /locus_tag="JNZ89_003836"
     CDS             1372..2301
                     /gene="pfkB"
                     /locus_tag="JNZ89_003836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase II"
                     /protein_id="HAY8937561.1"
                     /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV
                     ARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGE
                     QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISASQKQG
                     IRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA
                     KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV
                     RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR"
     gene            2402..2692
                     /gene="ghoS"
                     /locus_tag="JNZ89_003837"
     CDS             2402..2692
                     /gene="ghoS"
                     /locus_tag="JNZ89_003837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HAY8937562.1"
                     /translation="MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEG
                     NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK"
     gene            2798..3658
                     /locus_tag="JNZ89_003838"
     CDS             2798..3658
                     /locus_tag="JNZ89_003838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HAY8937563.1"
                     /translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
                     KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS
                     AFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
                     EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDR
                     ECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIA
                     QQSLDRLLAA"
     gene            complement(3699..4235)
                     /locus_tag="JNZ89_003839"
     CDS             complement(3699..4235)
                     /locus_tag="JNZ89_003839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937564.1"
                     /translation="MTYQQAGHIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQE
                     GINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ
                     DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL
                     PVICIAAGYVFFSLLGFI"
     gene            4382..5050
                     /gene="hxpB"
                     /locus_tag="JNZ89_003840"
     CDS             4382..5050
                     /gene="hxpB"
                     /locus_tag="JNZ89_003840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HAY8937565.1"
                     /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN
                     ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA
                     LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK
                     LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK
                     DLLG"
     gene            5213..5791
                     /locus_tag="JNZ89_003841"
     CDS             5213..5791
                     /locus_tag="JNZ89_003841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707386.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY8937566.1"
                     /translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL
                     PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADA
                     LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
                     WMPHSLPENSAVRWSSQIINTLQIQFHRLIKH"
     gene            5936..7327
                     /locus_tag="JNZ89_003842"
     CDS             5936..7327
                     /locus_tag="JNZ89_003842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HAY8937567.1"
                     /translation="MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFG
                     LALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
                     KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
                     LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAA
                     IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFA
                     VHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
                     ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGG
                     ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKA
                     ILDSEDDAELAHR"
BASE COUNT         1867 a         1809 c         1837 g         1922 t
ORIGIN      
        1 attttcgata tatatgttga tgcataatat tattttttca taaaacgcag aaacagtgac
       61 caggtgtaca acgccaccca acggctgtaa taacaaaaaa tcccttgatg cccgtccctt
      121 ttgttacact ccgttatcac gcacaagaga tatgcaggac actggaatgc cgactaaacg
      181 ctttgataaa aaacactgga agatggtggt ggtgctactg gcaatctgtg gcgctatgtt
      241 gttgctacgt tgggcagcaa tgatttgggg ctgagcagtg acaaacgaag acagccagac
      301 cgcataacac ggtccggcag ataattttac atgctgtagc ccagcgataa ggttgtccga
      361 cggtcggtat gttccggtgc agactctgga ggttcagagt tccatgtaac gttgtaagtc
      421 accttcagtc caaaatgttc attaatagca acatttaatg cgctttcgga gttcagcgtt
      481 gtgtcttccg cgccaaagac cgaaacaccc tgcgtaaatt tagcgttgtc agtcaactgc
      541 catgcataag ccccggaggc atagcccagc ggctgagttt cactggcatt gtcggtatat
      601 ttgtcgtaac gcacacctgg accgaattca aagcggaaac tgtgtaccgg gccattcaaa
      661 aactgacgac cataacccgc ggtcaacaca tcgcgctctc gatagccgtt ataacggtct
      721 gtcagccagc ttgcctgacc aaataaatag tcataatcag ttaaattaaa gcggctacgc
      781 ccgcccgccg catatttttc tgaagaacgc tcatcattag aagaagtatt actggcgttc
      841 ccccacagcg accaggcagt ggtttgtcca taccaggtca tggtggtgtc agccgtaagt
      901 gaggagcttt tcgtattgcc tgattgtgca agatatcctg cgttcagatt accttcgaaa
      961 ggttttttag cgctggcagg atcgtccatg acagtaaaaa cggaatcatc ggcagctgca
     1021 ttcagtgacg caaacatgcc ccccgccaac ataacgatgg caggaactgt cttcaaaagc
     1081 ttcatttatc aagagtccgt acaacaaaaa aagagaccat cgcggtcccg gaaactttct
     1141 taaggatcaa agattagcgt ccctggaaag gtaacgaatt ataaaaaggc gcgaataact
     1201 tagcaatgta ttcttatttc attttttgaa taagcatgtg gcgaaaacag atttttattt
     1261 atatatattt atctgcaaaa ttttaaataa agctccaata aatcatattg ttaatttctt
     1321 cactttccgc tgattcggtg ccagactgaa atcagcctat aggaggaaat gatggtacgt
     1381 atctatacgt tgacacttgc gccctctctc gatagcgcaa caattacccc gcaaatttat
     1441 cccgaaggaa aactgcgctg taccgcaccg gtgttcgaac ccgggggcgg cggcatcaac
     1501 gtcgcccgcg ccattgccca tcttggaggc agtgccacag cgatcttccc ggcgggtggc
     1561 gcgaccggcg aacacctggt ttcactgttg gcggatgaaa atgtccccgt cgctactgta
     1621 gaagccaaag actggacccg gcagaattta catgtacatg tggaagcaag cggtgagcag
     1681 tatcgttttg ttatgccagg cgcggcatta aatgaagatg agtttcgcca gcttgaagag
     1741 caagttctgg aaattgaatc cggggccatc ctagtcataa gcggaagcct gccgccaggt
     1801 gtgaagctgg aaaaattaac ccaactgatt tccgcttcgc aaaaacaagg gatccgctgc
     1861 atcgtcgaca gttctggcga agcgttaagt gcagcactgg caattggtaa catcgagttg
     1921 gttaagccta accaaaaaga actcagtgcg ctggtgaatc gcgaactcac ccagccggac
     1981 gatgtccgca aagccgcgca ggaaatcgtt aatagcggca aggccaaacg ggttgtcgtt
     2041 tcccttggtc cacaaggagc gctgggtgtt gatagtgaaa actgcattca ggtggtgcca
     2101 ccaccggtga aaagccagag taccgttggc gctggtgaca gcatggtcgg cgcgatgaca
     2161 ctgaaactgg cagaaaatgc ctctcttgaa gagatggtcc gttttggcgt agctgcgggg
     2221 agtgcagcca cactcaatca gggaacacgt ctgtgctccc atgacgatac gcaaaaaatt
     2281 tacgcttacc tttcccgcta acaaaaacat tcccccagca ttgggggaat caccaccaac
     2341 ctgtcggcaa cgcgtttctc cgactatgct caaaagtcat gtgataacaa aggggtgaac
     2401 tatggccagt ggcgatcttg tccgttatgt cataaccgtc atgttgcatg aggatacatt
     2461 gactgaaatt aacgagttga ataattacct gactcgcgac ggttttttgc tcaccatgac
     2521 ggatgatgag ggaaatatcc atgagctggg gactaacact tttggactta tcagtaccca
     2581 aagtgaagaa gaaattagag aactggtttc ggggcttacc caaagtgcaa ccggcaaaga
     2641 tcctgaaatc accatcacga cctgggagga atggaatagc aacagaaaat aaatggtttt
     2701 tgggcaataa tcagtctgtg gtgtgcgtta gctcgtgttt ttacaccgca ttcttgcgct
     2761 aaccttatga tctggcagac aacatgggag agacatcatg tggcaggcaa tcagtcgtct
     2821 tttgagcgag cagttaggtg aaggcgaaat cgaactgcgt aatgaactgc ctggcggaga
     2881 agtccatgcc gcatggcatt tgcgctatgc aggacatgac tttttcgtca aatgtgatga
     2941 aagggaactg cttcccggtt ttaccgccga agccgaccaa ctggagttac tgtcgcgtag
     3001 taaaaccgtc accgtgccta aggtttgggc agtaggcgct gaccgtgact acagttttct
     3061 ggtgatggat tatctcccac ctcgtccgct ggatgcgcat agcgcattta ttcttggtca
     3121 gcaaattgcg cgtttacatc aatggagtga ccaaccacaa tttggcctcg attttgataa
     3181 ctcgctctcc acaactccac agcccaacac ctggcaacgt cgctggtcaa cgttttttgc
     3241 tgaacaacgg attggctggc agttggaact ggcagcagag aaagggatcg ctttcggcaa
     3301 tatcgacgcc atcgtcgagc atattcagca gcgtctggcc tcgcatcaac cgcagccttc
     3361 tctgttgcac ggcgatttat ggtccggcaa ctgtgcgctg ggtccggatg gcccgtacat
     3421 tttcgaccct gcctgctact ggggtgaccg agagtgcgac ctggcgatgt taccgctgca
     3481 tactgaacag ccgccacaaa tctatgacgg ctatcagtca gtatccccgc tacctgccga
     3541 tttccttgaa cgtcaaccgg tttaccaact ctacacgctg ttaaatcgtg caaggttatt
     3601 tggcggtcag catttggtta ttgctcagca gtcactggat agattattag cagcatgata
     3661 tgggttgaag ataatggccg ctctgtgcgg ccttttgatt aaataaaccc aagcagagaa
     3721 aagaacacat aacctgcagc aatacaaata accggcagga tatacagtga gaaaaactgc
     3781 aggaaaatag tatggtgcgg aacaacaata cgggactcaa tttgttcacg cgttagcccc
     3841 tcttcccctt tggctttttc cagaatgagt tgatcttcaa caccttcccg caagaagcgc
     3901 gcctggcgac tcattcgggc accggaatcc tgcaacgcca gtccgacaaa aatcaggatg
     3961 aaaatcaccc agaacataac gttcacgcca ccattaaaat tgggcgtcgg ggagttatac
     4021 cagaacagat tcaaaaaagg cgtattcgcc tgcatcatat cgatcatgac atgagtaaag
     4081 tcgagcatga ccgcattaat gccttcctgg ttttcctgcc gggtattcat aaatttcagc
     4141 aaagaaatca atgtagagat caatgcaggt ataaaaatca cccaacccaa aatccttttc
     4201 aaaacagcaa tgtgtccagc ttgttgatac gtcatgagtt ctccttgatt aagacgcgtc
     4261 gtttcactta gtttacctgt agatatctgt tttcgcccat tctttaaagg cgatatgata
     4321 ggcgcttaat cataagcacg gcttaatacc ttacacataa tgctctaaag gagaggttgt
     4381 aatgtcaacc ccgcgtcaga ttcttgctgc aatttttgat atggatggat tacttatcga
     4441 ctcagaacct ttatgggatc gagccgaact ggatgtgatg gcaagcctgg gggtggatat
     4501 ctcccgtcgt aacgagctgc cggacacctt aggtttacgc atcgatatgg tggtcgatct
     4561 ttggtacgcc cggcaaccgt ggaatgggcc aagccgtcag gaagtagtag aacgggttat
     4621 tgcccgtgcc atttcactgg ttgaagagac acgtccatta ttaccaggcg tgcgcgaagc
     4681 tgttgcgtta tgcaaagaac aaggtttatt ggtgggactg gcctccgcgt caccactaca
     4741 tatgctggaa aaagtgttga ccatgtttga cttacgcgac agtttcgatg ccctcgcctc
     4801 ggctgaaaaa ctgccttaca gcaagccgca tccgcaagta tatctcgact gcgcagcaaa
     4861 actgggcgtt gacccactga cctgcgtggc gctggaagac tcggtaaatg gcatgatcgc
     4921 ttctaaagca gcccgcatgc gttccatcgt cgttcctgcg ccagaagcgc aaaatgatcc
     4981 acgttttgta ttagcaaacg tcaaactctc atcgctgaca gaactcaccg caaaagacct
     5041 tctcggttaa tgaccagggg cagtgatcac gctgcccctg gttctttatc tgaatttgca
     5101 ttcaactgac ggattaatcg tcaatttaag agaaagagtt acaccgtcac cacttccgtg
     5161 cactgtataa aaatcctata ctgtacgtat cgacagttta gtgagtttta tcatgacggc
     5221 ggaaggtcac cttctctttt ctattgcttg tgcggtattt gccaaaaatg ccgagctgac
     5281 gcccgtgctg gcacagggtg actggtggca tattgtccct tccgcaatcc tgacgtgttt
     5341 gttaccggac atcgatcacc caaagtcgtt tcttgggcag cgattaaaat ggatatcaaa
     5401 accgatcgcc cgcgcttttg ggcatcgtgg ttttacccac agtctgctgg cggtatttgc
     5461 gctgctggca accttttacc ttaaggttcc ggaaggctgg ttcattccgg ctgatgcgct
     5521 acaaggaatg gtgctgggtt atttgagcca catacttgcc gatatgctga cacccgccgg
     5581 tgttcccctg ctctggccat gccgctggcg tttccgcttg cctatcctag ttccccaaaa
     5641 gggcaaccaa ctggaacgtt ttatctgtat ggcattattt gtctggtcgg tatggatgcc
     5701 ccattcatta cccgagaaca gcgctgttcg ttggtcatcg caaataatca ataccttgca
     5761 gatccagttt catcggctta ttaagcatta ggttgaatac taaaaagaca aaaatcacct
     5821 ttctggaata agcaattcca tttgaatata agagccagct cacagttctg ttaatcttgc
     5881 gccaacacta tgactgctac gcagtgatag aaataataag atcaggagaa cggggatgaa
     5941 ctttccatta attgcgaaca tcgtggtgtt cgttgtactg ctgtttgcgc tggctcagac
     6001 ccgccataaa cagtggagtc tggcgaaaaa agtgctggtg ggtctggtga tgggtgtggt
     6061 ttttggcctt gccctgcata ccatttatgg ttctgacagc caggtactta aagattctgt
     6121 acagtggttt aacatcgttg gtaacggcta tgttcaactg ctgcaaatga tcgttatgcc
     6181 gttagtcttc gcctctattc tgagcgcggt tgcccgtctg cataacgcat ctcagttagg
     6241 caaaatcagt tttctgacca tcggtacgct tttgtttacc acgctgattg cggcgctggt
     6301 cggtgtgctg gtcaccaacc tgtttggttt gacggctgaa ggtctggttc agggtggtgc
     6361 agaaactgca cgtctgaacg ccattgaaag taactatgtt ggtaaagtct ctgatctgag
     6421 cgttccgcag ctggtcttgt cctttatccc gaaaaacccg tttgccgatc ttaccggagc
     6481 caatccgacg tcaattatca gcgtggtaat ttttgccgca ttcctcggcg tagctgcatt
     6541 gaaactgctg aaggatgatg cgccgaaagg tgaacgcgtc ttagccgcta tcgataccct
     6601 acaaagctgg gtgatgaaac tggttcgcct tgtcatgcag ttgacccctt acggcgttct
     6661 ggctctaatg accaaagtgg ttgcaggttc taacttgcaa gacatcatca aactgggaag
     6721 tttcgttgtc gcgtcctacc tcggtctgct gattatgttt gcagtgcatg gcattctgct
     6781 gggcattaat ggcgtgagtc cgctgaagta cttccgtaag gtatggcctg tgctgacgtt
     6841 tgcctttacc agccgttcca gtgctgcgtc tatcccactg aatgtggaag cacaaacgcg
     6901 tcgtctgggc gttcctgaat ccatcgccag tttcgccgcc tctttcggtg caaccattgg
     6961 tcagaacggc tgcgccggtt tgtatccggc aatgctggcg gtgatggttg cgcctacggt
     7021 tggcattaac ccgctggacc cgatgtggat tgcgacgctg gtcggtattg ttaccgttag
     7081 ttccgcaggc gttgccggtg tcggtggtgg tgcaactttc gccgcactga ttgtgctgcc
     7141 tgcgatgggc ctgccagtaa ccctggtggc gctgttaatc tccgttgaac cgcttatcga
     7201 catgggccgt acggcgctaa acgttagtgg ctcgatgaca gctggcacgc tgaccagcca
     7261 gtggctgaag caaaccgata aagccattct ggatagcgaa gacgacgccg aactggcaca
     7321 ccgttaattc ttatgctggc aatggtccgt tttgtatagg ggccgttgct ttacttttta
     7381 aatgttccat cgcggcgatg catactgact catatttaaa cagatcgtca gcgaa
//
LOCUS       DADMIB010000192         7302 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.194, whole genome shotgun sequence.
ACCESSION   DADMIB010000192 DADMIB010000000
VERSION     DADMIB010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7302
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.194"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..679
                     /gene="csgG"
                     /locus_tag="JNZ89_003843"
                     /pseudo
     CDS             1..679
                     /gene="csgG"
                     /locus_tag="JNZ89_003843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309441.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgG"
     gene            complement(743..1234)
                     /locus_tag="JNZ89_003844"
     CDS             complement(743..1234)
                     /locus_tag="JNZ89_003844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HAY8937568.1"
                     /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ
                     GGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS
                     FVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIK
                     NKA"
     gene            complement(1336..1890)
                     /locus_tag="JNZ89_003845"
     CDS             complement(1336..1890)
                     /locus_tag="JNZ89_003845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY8937569.1"
                     /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ
                     DELLTRLQKSCDMAQVSADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSERGMPL
                     ADTPADHIGTLLLAASWMEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW
                     RTMAPLTRDAISAMWDELEEDSEE"
     gene            complement(1914..2651)
                     /locus_tag="JNZ89_003846"
     CDS             complement(1914..2651)
                     /locus_tag="JNZ89_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HAY8937570.1"
                     /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM
                     EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE
                     PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS
                     SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER
                     ILNVSPRRLLNFLESRGMAPIAEFADL"
     gene            complement(2706..3644)
                     /gene="ghrA"
                     /locus_tag="JNZ89_003847"
     CDS             complement(2706..3644)
                     /gene="ghrA"
                     /locus_tag="JNZ89_003847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415551.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrA"
                     /protein_id="HAY8937571.1"
                     /translation="MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALV
                     WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY
                     AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRF
                     PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD
                     GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV
                     AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY"
     gene            3878..3965
                     /locus_tag="JNZ89_003848"
     tRNA            3878..3965
                     /locus_tag="JNZ89_003848"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3912..3914,aa:Ser,seq:gga)
     gene            complement(4115..4396)
                     /locus_tag="JNZ89_003849"
                     /pseudo
     CDS             complement(4115..4396)
                     /locus_tag="JNZ89_003849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309436.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
     gene            complement(4678..5682)
                     /locus_tag="JNZ89_003850"
     CDS             complement(4678..5682)
                     /locus_tag="JNZ89_003850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001179707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISSfl8 family transposase"
                     /protein_id="HAY8937572.1"
                     /translation="MQNITLIGIDLGKHSFHIHCQDKSGKALLRKKFTRTKLMQFLAT
                     CPPSVVVMEACAGAHFMARCISDFGHETKLISPQFVRPFVKSNKNDFVDAEAICEAAS
                     RPSMRFVQPRTETQQAMRALHRVRESLIRDKVKTTNQIHGFLLEFGISLPIGDAVIKR
                     LSLVLAEHEIPEYLSRLLVRLHTHYFYLVEQIAELESELSQSINADDTAQRIMTIPGV
                     GPITASLLSSQLGDGKQFSCSRDFAASTGLVPRQYSTGGKSTLLGISKRGDKNLRRLL
                     VQCARSFIMRLERKHGKLAEWVREQLNKKHSNVVTCALANKLARIAWAITTQKKEYQA
                     "
     gene            complement(5754..6314)
                     /locus_tag="JNZ89_003851"
                     /pseudo
     CDS             complement(5754..6314)
                     /locus_tag="JNZ89_003851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309436.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4942 domain-containing protein"
     gene            complement(6399..6596)
                     /locus_tag="JNZ89_003852"
     CDS             complement(6399..6596)
                     /locus_tag="JNZ89_003852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF957 domain-containing protein"
                     /protein_id="HAY8937573.1"
                     /translation="MKSLTTETALDILIAWLQDNIDCGSGIIFDNDEDKTDSAALLPC
                     IEQAREDVRTLRHLQLLHQNR"
     gene            complement(6608..7099)
                     /locus_tag="JNZ89_003853"
     CDS             complement(6608..7099)
                     /locus_tag="JNZ89_003853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937574.1"
                     /translation="MMKLALTLEADSVNVQALNIGRIVVDVDGIELAELINMVCDNGY
                     SLRVVDESDQTSAECTPPFATLTGIRCSTAHITETDNAWLYSLSHQTSDFGESEWIHF
                     TGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLVVTLIRRYGVSLIHLDASAECLPGLPT
                     FDW"
     gene            complement(7096..>7302)
                     /gene="cbtA"
                     /locus_tag="JNZ89_003854"
     CDS             complement(7096..>7302)
                     /gene="cbtA"
                     /locus_tag="JNZ89_003854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV toxin-antitoxin system toxin CbtA"
                     /protein_id="HAY8937575.1"
                     /translation="ISLCDAVNFLVEKYALVRTDQPGFSTCPRSQLINSIDILRARRA
                     TGLMTRDNYRTVNNITLGKYPEAK"
BASE COUNT         1853 a         1845 c         1733 g         1871 t
ORIGIN      
        1 ggtatacaac attcaggacg aaaccgggca atttaaaccc tacccggcaa gtaacttctc
       61 cactgctgtt ccgcaaagcg ccacggcaat gctggtcacg gcattgaaag attctcgctg
      121 gtttataccg ctggagcgct agggcttaca aaacctgctt aacgagcgca agattattcg
      181 tgcggcacaa gaaaacggca cggttgccat taataaccga atcccgctgc aatctttaac
      241 ggcggcaaat attatggttg aaggttcgat tatcggttat gaaagcaacg ttaaatcggg
      301 cggtgttggg gcaagatatt ttgggatcgg tgcagacacg caataccagc tcgatcagat
      361 tgccgtgaac ctgcgtgtcg tcaatgtgag taccgctgag atcctctcct cggtgaacac
      421 cagtaagacg atactttcct atgaagttca ggccggggtt ttccgcttta ttgactacca
      481 gcgcttgctg gaaggggaag tgggttacac ctcaaacgaa cccgttatgc tgtgtctgat
      541 gtcggctatc gaaacagggg tcattttcct gattaatgat ggtatcgacc gtggtctgtg
      601 ggatttgcaa aataaagcag aacggcagaa tgacattctg gtgaaatacc gccatatgtc
      661 ggttccaccg gaatcctgac agataaaaaa gccggaatta tcatccggca ttttactgtt
      721 taagcgaaag cgtgagtgcc cctcacgctt tatttttgat ttcctgctca cggtgagccg
      781 tctttgcact acgcgccgcc agccacaggc cgctgttttt cattgcgtaa ccaaatacca
      841 gcccaagcgc cagcgaaggt aacaccagtt tccagtcacc ctgcccggca aacgtcgcgc
      901 atgcgcctat aaacgtcccc ggaacaaatg aaagcagcag ctgtttggcc tgaatacaca
      961 tcagaaacgc cacaataccg gttatgacat aaccgagaat ttccagatgt ggtgccagtg
     1021 cactaccgta aataatgacc atcgcccaca ccacgccact aagcagggtt gcagcggaga
     1081 tcgccagccc tttcagccca ccttgcgggc aggcaaagta ggccgtacag cccaggaagc
     1141 ccgcccagct tagtaagccc agggaaacag ccacccatcc ccagataccg gagagaatgc
     1201 ctgttgtgat tgcaatagag agaagtatgt tcatgccgca catgatagca gaaaacgcgg
     1261 ccatgaatga gatcgagcac acattttatg caacaacaaa ttatctgttg cagttatgag
     1321 tgacgatgat cacatttact cttcagaatc ttcttccagc tcgtcccaca ttgcactaat
     1381 ggcatcacgg gttagcggtg ccatggtgcg ccagaaaggc gtggttgcat gggcctccac
     1441 tttgccgagg aacgcaccac accagggtaa cagatactca ctgaacagtg tttccagtgc
     1501 ttcgctctca tcttccgttg actgatcttc catccaggaa gccgcaagca gcaatgtgcc
     1561 gatgtgatcg gctggcgtat ccgccagtgg catccctcgt tcggaaagaa aagcgcgcac
     1621 ttccgcttcc gttgcgtcct caacccatgc gctacgatat ggcggcacgg cacattcatc
     1681 gccgataaac aacgcattgt aatcggcaga gacttgcgcc atatcacagc ttttctgtaa
     1741 acgcgtcagt aactcatcct gctccagtgg ccagttcgca gccagtttcc cctcacgaat
     1801 cagggtaaac agcggcacca gtaaaggatc ttgcggttgg cggtaataga gcgaacccag
     1861 cacacgacag aggatagaaa actcgttcat taatatattt ccattactag taattaaagg
     1921 tctgcaaatt ccgcaatcgg tgccataccg cgagattcaa ggaagttcag taagcggcgc
     1981 ggagaaacat tcaaaatgcg ctctggcgga aaatctaccg cgtcgaggat tttaagacac
     2041 tcttcaaatt cccccatggt aaacgcggtg tgagaatccg agcctaatgc cacccaacct
     2101 ccagcatcac gtaccgctgc ggctaccgca cgacagttgt cttcactgcc cttacgtgag
     2161 tgtaaaaatg aagaattatt gatttccagc gccacctgat gtttcgcggc tgcttcagca
     2221 acggctttca catctatttc atatttggga tttccgggat ggcttattat atgcacattg
     2281 ccgctggcga tagtggcgat catcgcttgt gtattggtcg ctttgtcatg tggtgcaaaa
     2341 accggctcat gaaaaccggc aataatcaga tccagcgagt caaacatttt accgctgcaa
     2401 tcaatttcac catcaacatt tttaatgtta gcttcgatgc cgcgcaggat ccctacccca
     2461 tcaaccactc gcggccagat acgcatgtta atgaagtgcc agtgatgcgg agcatcttcc
     2521 atatccgggc catgatcggt gatcgcaaaa agtttaatgc ccttttgttt ggcctgggca
     2581 atgtaatcac tcaatgtgct atatgcatgt gtgctggcaa cggtatgcat atgaaggtcg
     2641 acgggataca taactctctc ctgtattcaa ttcccgccaa ggatagcagg aatcctgatg
     2701 ctttattagt agccgcgtgc gcggtcgact tgcccgcaga ccctctcccc tttttcgagc
     2761 tgggcaatgg tgcgagaaat gtactccaca gcttcagcgg gacgggtaat cgcggcgaca
     2821 tgtggtgtta tcgtcacgcg tggatgttgc cagagcggac tttcaggcgg taagggttca
     2881 cgattaaaaa catccaacat tgcgccttta actttgccgc tatccagcgc cgcgagcagg
     2941 tcatcttcca caacatgaac accacgcgcc aggttgagga gatacgcgcc atccggtaat
     3001 ttttcgagta attgttgatt aataatgccg acggtttcag gggtattcgg taacaaatta
     3061 atcaataccc gacattggct cagaaatgca gacagttctt cccgtccggc aaagctttgc
     3121 acgccaggcc acgatttacg ggttcgactc cagcaacgca gcggaaagcg ccaggtttgc
     3181 agactctgag caactttact gcccagtacg cctgcgccca aaatgccgat ggtaaaatct
     3241 tcccaatgat attcaggcag cggttgccaa tgcgaactat tttgctggat gcgataatcg
     3301 tcaaaacgtc gaaaccaatg cagcacctga ctgacagcat attcctgcat ttgctcgccc
     3361 ataccagtat cttccaggcg aaaaagtgga acagaagggt tcagcatttc agggtgtgcc
     3421 tgtagcttgc tcaaaataga atcaacaccg gccccgagtg cgaacaccgc tttaagatcg
     3481 cgccctgcca gcatttcaac aggaggatgc cagactaaag cataatcagc agagtcatta
     3541 tctccgcttt tccatgctct gactcttgcc tgaggaatag ctttgcgcag tgcctcaatc
     3601 caccattggg tatcgaacgt tgggtgataa aagatgatat ccatactgac tcccgaaaag
     3661 cgttgtgcga aatttattcg cacttatcgt tatgatctac aaaggccacc agcataacaa
     3721 atccgtggtc ggtggcaaaa aaagcagatt tcgcttatta aaaccacaca ttgattgaag
     3781 tttgaataaa cgcgcgattt tttcaaaaag tttgttgacc tcaggtcatg atttccctaa
     3841 attagcgccc gttccagcaa gacaggaaca acaatttggt gaggtgtccg agcggttgaa
     3901 ggagcacgcc tggaaagtgt gtatacggca acgtatcggg ggttcgaatc cccccctcac
     3961 cgccagatta taagtgcatg ttattgttta acatgcgctt ttttattttt ccttccagac
     4021 agtatgccat cgggtatgcc atctgaaacc ggtttatatg ccccgcgatc atatcttatc
     4081 ggacaatttc cgatctttga gcatactggc aaagctatac tgccagcata tcaggatagt
     4141 gttttgcgat aatatcattc agtctgtcaa ccagttctgg ttttctgaac gtgatatgcg
     4201 cggagccctt cttaaagtat ctgatgctga acatctcatc ttcatagctc tctttaccct
     4261 gaacagactg aatgtgatca tccagacgaa gggtgatgtt tccccggttg tcggggattg
     4321 gtttaccgct gaacaggtgc aacattcttt ccagatcggc gagtcggtca gcctgttgtc
     4381 cggtgataag atgaaatcta tggtcacccc cgtttttgca acactgattt ttgattaatg
     4441 gttggcttgc ttaaatctat ccggcgtctc tgtgggcaag gatgcccgcg ccccgatgag
     4501 ttccgcacct gataatccta aaaatcccct cggcttcagt gagccatttc atctgttagg
     4561 tttttaatca ggtcgatttg ccgttcatgt catcaataat cagtcttcgc aaaaccagaa
     4621 aggtaacttg tatcttattg tttaaaataa actaattgag ttatatcagc atctatatca
     4681 ggcctgatat tcttttttct gagtagtgat tgcccaggca attcgagcca gtttatttgc
     4741 cagagcgcag gtaaccacat tcgaatgctt cttgttgagt tgctcccgaa cccactcagc
     4801 aagttttcca tgcttgcgtt caagtcgcat tatgaatgag cgggcacact gaaccagtaa
     4861 ccggcgtaaa tttttatcac ctcgcttact gatacccaac agagtcgatt ttcctccagt
     4921 gctatactgc cggggaacaa gtcctgtgga agctgcaaaa tccctgctgc atgagaactg
     4981 tttcccgtca ccaagttgcg acgatagtaa gctggcagta atcggaccaa caccaggaat
     5041 tgtcataatg cgctgagcgg tatcatcagc gttgattgac tgacttaatt ctgattccag
     5101 ctctgctatt tgctcaacaa ggtaaaagta gtgggtatgc aacctcacca aaaggcggct
     5161 cagatattcg gggatttcgt gttcagccaa cacgagagac aaccgtttta ttacagcatc
     5221 acctatcggc aggctgattc caaattccag caagaaaccg tggatctggt tggttgtttt
     5281 caccttatct ctgatgagcg attctctgac ccggtgtaac gccctcatgg cctgctgggt
     5341 ctcagttctt ggctggacaa aacgcattga tggtcgtgaa gccgcttcgc atatggcttc
     5401 tgcatcaaca aaatcattct tattactttt gacaaacggg cgaacgaact gtggagaaat
     5461 cagcttagtt tcatgcccaa aatcagagat acagcgagcc ataaagtgtg cacccgcaca
     5521 ggcttccatt acaacaactg agggcggaca tgtcgccaga aactgcatca gtttagtacg
     5581 ggtaaatttt ttacgcagaa gagccttacc agacttgtct tgacaatgaa tgtggaagga
     5641 gtgctttccg agatcgatac caataagtgt gatgttctgc atgatggtct ctccgttaaa
     5701 gggatttacc ttaacagcgt actgctgtta aggtgggggt gaccatatca ttatccccac
     5761 cggtcccatc tcaccagatt gttgacgata attttactgc caaatttaca ggggcaattg
     5821 gttttgtaat tccagttcag ccctctgaag acgttgatca cccctcgctc aaacacctca
     5881 tccttattct ggtgcagttg ttcaaatgtg ctcagaatgt tcgcttcgct gatttccgga
     5941 aaattatcgt actccagtga ccggtaccat gtatcacggg cctgcgtatc cattaatgac
     6001 agcatcccgg aacgttgcat caggtcacgc cagatttcgc gatcaagatt ccgggtaatg
     6061 gctttcattg ctgtttcggg tttctccatc agccagcagc cgcagcgaaa atcctgtttc
     6121 atggcccagt ccggggcagt tttacctccg atgctttccg tcagcaccga gatttcagcc
     6181 agttgtcgga taagtgtgtc gatttgcaac agtgtactct ttcgtacagc cagaatgtgg
     6241 cgaatgctgg ttgagcagat aacgtccgta tgcccgttga ccacttccgg acgggagatt
     6301 gtgatatctg acataatcga tattcctttt tgcagataaa tgaaaacgcc agccctgtgc
     6361 aggctggcgt cagaggaatg aagtctggtg agtgagcttc accggttctg gtgcagaagc
     6421 tgcagatgac gcagggtacg gacatcctcc cgggcctgtt cgatacaggg caacagtgct
     6481 gctgaatccg ttttatcctc atcgttgtca aagataattc ccgatccgca gtcgatattg
     6541 tcctgcagcc acgcaatcag aatatccagc gctgtttccg tggttaatga tttcatgttg
     6601 ttcctggtta ccagtcgaaa gtgggtaaac ccggcaggca ttcagcgctg gcatccagat
     6661 gaatgagact gacgccataa cgccggatga gtgtgacgac cagacgacgg aacgtttttg
     6721 acagccccag gcgtttaagc cgcagaaccg ggtatgacca cgcatcggta cgtaacagat
     6781 atccgctacc tgtaaaatga atccattctg attcaccgaa gtcactggtc tggtgtgaca
     6841 gcgagtacaa ccaggcgttg tccgtttccg tgatatgtgc ggtactgcag cgtatgccgg
     6901 taagggtagc aaatggtggc gtgcattctg ctgaggtctg gtcagattca tcaacaacac
     6961 gaagggagta gccgttatcg cagaccatgt taatcagttc agcgagctca ataccatcga
     7021 cgtcaacgac aatgcgccct atgttcagtg cctgtacgtt aacgctgtcg gcttccagtg
     7081 tcagggccag tttcatcatt tcgcctccgg atacttaccc agggtaatgt tatttaccgt
     7141 tctgtaattg tcgcgggtca tcaggccggt cgcccggcga gcccggagga tatcaatact
     7201 gtttattaac tgagagcggg gacaggtgct gaatcccggc tggtcggtac gcaccagcgc
     7261 gtatttttcc acgagaaaat taactgcatc acacagtgaa at
//
LOCUS       DADMIB010000193         7215 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.195, whole genome shotgun sequence.
ACCESSION   DADMIB010000193 DADMIB010000000
VERSION     DADMIB010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7215
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.195"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(826..1356)
                     /locus_tag="JNZ89_003855"
                     /pseudo
     CDS             complement(826..1356)
                     /locus_tag="JNZ89_003855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416483.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
     gene            complement(1699..2349)
                     /gene="zinT"
                     /locus_tag="JNZ89_003856"
     CDS             complement(1699..2349)
                     /gene="zinT"
                     /locus_tag="JNZ89_003856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein ZinT"
                     /protein_id="HAY8937576.1"
                     /translation="MAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGV
                     FDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYA
                     TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK
                     YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH"
     gene            complement(2606..3241)
                     /gene="msrQ"
                     /locus_tag="JNZ89_003857"
     CDS             complement(2606..3241)
                     /gene="msrQ"
                     /locus_tag="JNZ89_003857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HAY8937577.1"
                     /translation="MRLTAKQVTWLKVSLHLAGLLPFLWLVWAINHGGLGADPVKDIQ
                     HFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV
                     NNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAIL
                     APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV"
     gene            complement(3242..4246)
                     /gene="msrP"
                     /locus_tag="JNZ89_003858"
     CDS             complement(3242..4246)
                     /gene="msrP"
                     /locus_tag="JNZ89_003858"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HAY8937578.1"
                     /translation="MKKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHA
                     DLLSWFKGNDRPPAPAGKPLEFSKPAAWQNNLPLTPVDKVSGYNNFYEFGLDKADPAA
                     NAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFP
                     LHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLT
                     LMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYG
                     FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYADQVASLYRGLDLRENF
                     "
     gene            complement(4355..4768)
                     /gene="hiuH"
                     /locus_tag="JNZ89_003859"
     CDS             complement(4355..4768)
                     /gene="hiuH"
                     /locus_tag="JNZ89_003859"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HAY8937579.1"
                     /translation="MLKRYLVLSVATAAFSLPSLVYAAQQNILSVHILNQQTGKPAAD
                     VTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLES
                     FFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS"
     gene            4901..5572
                     /gene="hprR"
                     /locus_tag="JNZ89_003860"
     CDS             4901..5572
                     /gene="hprR"
                     /locus_tag="JNZ89_003860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707854.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor HprR"
                     /protein_id="HAY8937580.1"
                     /translation="MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD
                     YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPF
                     SFSELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLA
                     SRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSF
                     VAVKK"
     gene            5572..6930
                     /locus_tag="JNZ89_003861"
     CDS             5572..6930
                     /locus_tag="JNZ89_003861"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal sensor histidine kinase"
                     /protein_id="HAY8937581.1"
                     /translation="MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTT
                     LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDGINKIVNRTNVSDDMLN
                     NIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
                     SIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPL
                     GQALNKMHQALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIA
                     GNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICF
                     KVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNGYLNIDIASLGTK
                     IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSASYHYLNKHNVFRITLPQ
                     RN"
BASE COUNT         2026 a         1490 c         1632 g         2067 t
ORIGIN      
        1 gctgagaaaa aagcgtgctt tcccaatctg gggcaaatca cgtctgaatg acacctgaaa
       61 acaggtggtg gactcaagaa ggcttggaat attcttcttt aatgttatgt aattcattga
      121 tttttcgtgt acgattttaa gacatttttt ccaagaaaaa tttttaactc tttgattttt
      181 cgactctgta tcatcggtct cgaaaaccgg agtaggggca actctaccgg gggggcaaat
      241 ccccctctct ccgccacttt atcaatgact tatctcccga cttcccgcct tacttttcct
      301 aaacagaaca atcgtagaat attcttgaag ggttagatcg tcactgtttt ctgttcgata
      361 ctgtgacatt cagcacttga ttcgctatgg atctgacagg aagctttcga gcgaaaatgt
      421 gcagttattc agtcgttttc ttatcgctca ccattattct tttagacatt catcctatga
      481 aactgccgca aagttggtgg tgggaactga agttgcgtag agaaggggtc aataattgag
      541 tcaaaaaagg aacgcggccg tcagattaaa gccgcgggac aaagtccata atttccaaga
      601 gttgttgaat ttcccagctt ttttgaaagc ctttgtatca tactaacaag taaaaaaggt
      661 ttaaatacca aaattaacct gtatttttga taagtcttac cattgtacga tttacacagt
      721 ttctgctcct ccttgttgat agtggaaagg gtgcattgtg cacttgcgta aacatttatg
      781 acgcgttgat gtccatggtt cacatttcct tgtcagggga tcgacttatt tgcggcgagg
      841 catcattcgt aacagagtat tatctttctg aatgtagtga tgaaagagtg ctgcgccagc
      901 gtgagctgcg attaaaaagt aacctatatt tgcccaggtt tcgtgaatat tttatatcag
      961 tgctttaatt tcgctgtttg gggtaacaaa gggagacaca ttgaaaccaa ggaaactcca
     1021 cgattttcca ctgtaagcca tcaaagcaat ccccagcaga ggaagtgcaa ggaaggttat
     1081 ataaagcatg atgtgcatta gcgaagccgc tttcatttgc caggcaggtg gcggtggcac
     1141 aatagaagga tcactataac ggtgttttat aatcaggcgt gaaaacatta acacccaaac
     1201 gaatataccc gcattgtaat gtgtttctcg catcagcaga taagtactac tacctttagg
     1261 aaaccagcca cggagttcca tcgcggcata ggttattgca acgaaaagca gcgttatcca
     1321 atgtaaataa atttgagttt ttgagaatcg gttcattttt gtagctcctg taatttttac
     1381 agtcaagcta tcccacgaac cttaaaaatt ccttatacag atgtggtttt aagaatttgt
     1441 tatttaaaaa attgatagtg cacattgtaa ccagccaata taagcaatgg cgtgagcaca
     1501 ggtatctttc tctgttggcc gtattgtgta tggaatccgt tattggttaa ctcaatgcgg
     1561 gttagcttat taatatacag acacgtcata gtgatgagcg tgtctgtagc tagcttgcgt
     1621 tcagtggcgt ttgtggatgg accagtggca gttatgatga cttactaaag cggcatcgag
     1681 gcgttatcat gagaatactc aatgagacat catttcctcg accacttctt cgctactcaa
     1741 ctgatatgga taatacgttg gccagttttc catttcattt aataaagatt gctgtgaatc
     1801 attacccata aaaatgtgaa aatgagatga ttttcgtggt gcaattatat gatcgctaaa
     1861 ttgtatatat ttaggggctt tgctttcagg atctttacat tcgaataagt aacgaacgcc
     1921 tttcttgcct gatttatagg tgagtatttt gtatccatcg taatcatatt tacaggatgt
     1981 tgtttcatta tttctatgga attcaacaat gccgtcctca atgccaatca tctcgatatc
     2041 tgttgcataa cctttgtgat aataatcttt aatttcagca aatgttttag ttttatctgc
     2101 atccgctttc ttctgaaaga cggggtcaag tttgccactt tgcagtaaag gataaacgga
     2161 ttgccagacc ccatcccagt cactgagcgt tcggttttgt acattggcat catcaaaaac
     2221 accattagca gctttttgtt cgacctctgt taagggtttg ccgtgtgagt gatgaccatg
     2281 cgaaaaggca ggagcgctaa caataaagac acctaacgca acagccagtt tgtgaagacg
     2341 aatcgccaaa acagtttcct ccagagtcat tgtatatgat gtgtaatgtt atattgtaac
     2401 atatggcaaa atgcaacaac tcttaggaga tgagagcata gttttctcag gtgtacttat
     2461 ctatcttatt gaaataaaat gaattatatt gataatttga ggttgatgac aaacgaaaca
     2521 taatctgatg tgatctgcgt aggccggata gggcgctcgc gccgcatccg gcagggataa
     2581 cgcgtacttt gtcggcaata tgaagttata cagataattt gttgtgaacc tgcttgcgta
     2641 accggttaaa aagggaacgc aacttcttat accgtaaggc taaaagcagt acagccagcc
     2701 cagcgtagat gagcggctgc ggtgaaataa tcttcactga ccacagataa tgtattgggg
     2761 ccaggatcgc gacaagatag acgaaattat gcaactgttg ccagtgcttg ccgagttttc
     2821 gctgcatcgc ctgggttgaa gtaaacgcta aagcaagcaa aataacccag ctgataattc
     2881 ctaacgttaa ataaggccgg gtaattaact ccttgcctaa taacgccaga ttattcacgc
     2941 ccagctccag caatgcgtaa ctggttaaat gcagtgtcgc ccaggcaaag caccataagc
     3001 ctaacaggcg gcgagtgcgt atcaataacg gctgttttgc gtagcgtgcc agaggtgtga
     3061 ttaacaaggt cgccagcaaa aatttcagtg cagtgcgacc ggtaaaatgc tgaatatctt
     3121 tcaccggatc ggcacccagt ccaccgtgat tgatcgccca gaccagccag agaaacggca
     3181 acaatccggc aagatgcagg ctaactttca gccatgtcac ctgttttgct gtcagacgca
     3241 ttcagaaatt ctcccgcaaa tccaggccac gatacagcga tgccacctgg tcggcgtaac
     3301 cattaaacag tagcgttggc tggcgctgaa catcgaggat gccgcctgaa ccaataaatc
     3361 gttcggtagc ctgtgaccag cgcgggtgat caacatgcgg attaacgttg gcgtaaaaac
     3421 cgtattcgtc aggcgctgcc agattccagg tggttggcgg acgctcgcgg gtcagcttaa
     3481 tactgactat cgatttaatc cctttaaagc catatttcca cggcacaatc agtcgtaccg
     3541 gcgcgccatt ttgtggcggt aacgccttgc cataaacacc cacggtcatc agtgtgagcg
     3601 gatgcattgc ttcgtcgaga cgcaatcctt cgacataagg atatttcagc ccgccgccga
     3661 taaagcggtc ctgctggcct ggcatttgtt ccggtgcata aattgtttcg aaagcgacat
     3721 acttcgcatt gctggtgggt tcggcaagcg ccagcaattt gtgcagcgga aaaccaatcc
     3781 acggcaccac catcgaccat gcctccacgc agcgcatacg ataaatacgc tcttccagcg
     3841 ggaagcgacg ggttaaatca tcgtgatcga gggtcaatgg ttttgccact tcgccgctga
     3901 ttttcagtgt ccatggatcg gttttcaggc taccagcatt agcggcggga tcggctttat
     3961 ccagcccgaa ttcatagaag ttgttataac cggagacttt atctactggc gtcagtggca
     4021 ggttattttg ccaggcggca ggcttgctga actccagcgg ttttccggcg ggggcgggcg
     4081 ggcgatcgtt ccctttaaac cagctaagca gatcggcatg cgcagcgtga ggcaaagaaa
     4141 gtgcagctgc actgatgccc agtgctttta acacctgccg acgcttcata aagaataccg
     4201 actcggccgt aacatctgat tcttttaaaa attgattctt tttcataagc catcacactt
     4261 ttttgtcgtt agccagcaag agccgtttac tgttaatctg tcagggagtg tcctccctaa
     4321 cagtagcaga gatctgcttt tacatattta tgcattaact gccacgatag gttgaatacc
     4381 catattggct aagtaataaa ggcacatgat aatgctcgtt cactttatta atatgaaatt
     4441 caacggggat ctcagggaag aaactttcaa gattttgttt cttgaaatag tccccggttt
     4501 taaatacgac acggtaatcg cccgtagttg cagtttgctc gggccacagt gctttaattc
     4561 gtccatcctt atctgttttg gcggtattaa gttgtaacca gccgttatcc gccttctttt
     4621 caagagtgac tgtcacgtca gcagcgggct ttccggtttg ctggttcaaa atgtgcacgc
     4681 taagaatgtt ttgttgtgcg gcataaacca aagaaggtaa tgaaaatgct gccgttgcta
     4741 ccgagagtac taaataacgc tttaacatgt ttatatcctt gtcatgtgaa tgagttttga
     4801 ggatagcgaa aaagcggcca gggtaacctt acagcagcat tacaattttg taatgaacca
     4861 ggctgtttct ataacatatg atttatggca tattattttc atgaagattt tacttattga
     4921 agataatcaa aggacccagg agtgggtaac gcaggggctt tccgaagcgg gttatgtcat
     4981 tgatgccgtt tctgatggca gagatgggct ttatcttgcg ctgaaggatg attatgcatt
     5041 gataattctg gatattatgc ttccgggtat ggatggctgg cagatcttac aaacgttaag
     5101 aacagcaaag caaacccctg ttatttgcct tactgcaagg gattctgtcg atgacagagt
     5161 cagagggctg gacagtggag caaatgatta tctggtaaaa cctttttcat tttctgagtt
     5221 gctggcaagg gttcgggcac aattaaggca acatcacgct ttgaattcaa cattagaaat
     5281 cagtggctta agaatggact ctgtaagtca aagtgtgagc agggacaata tcagtattac
     5341 actgacgcgc aaggagtttc agttactttg gctactggcc tccagagctg gcgaaattat
     5401 acccagaacg gttattgcga gtgaaatttg gggaatcaac tttgatagtg ataccaatac
     5461 ggtggatgtc gccattcgca ggctccgcgc aaaagttgat gatccttttc ctgaaaagct
     5521 aatcgccaca atccggggga tgggctattc attcgtagcg gtaaaaaaat aatgaaaaga
     5581 ttgtctataa ccgtccgttt aaccttgctt tttatattgc tgctgtctgt tgctggcgct
     5641 ggaattgtct ggactctcta taatggcctg gcaagtgagt tgaaatggcg cgatgataca
     5701 acactcatta accggacagc acagatcaag cagttgttaa ttgatggggt aaatccagat
     5761 acgttacctg tatactttaa ccggatgatg gatgttagtc aggatatctt gatcattcat
     5821 ggtgatggca tcaataaaat tgttaaccgg acaaatgtca gtgatgacat gttaaataac
     5881 atacctgcta gtgagacaat cagcgcagct ggcatttaca gaagcattat taatgatact
     5941 gagattgatg ctttacgaat taatattgat gaagtttcgc catcattaac ggttactgtg
     6001 gctaaattgg cttcagctag acataacatg cttgaacagt ataaaattaa tagcattata
     6061 atttgcattg tcgccattgt actttgctca gtattaagtc cgctgttaat cagaacggga
     6121 ttacgagaga tcaaaaagtt gagtggtgta acggaagcgc tgaattataa cgatagccga
     6181 gagcctgttg aggttagcgc attaccgaga gaactaaaac ctcttgggca ggcgttgaat
     6241 aaaatgcatc aagccttagt caaagatttt gaacgcctaa gtcaatttgc tgacgatctc
     6301 gctcatgaac ttagaacgcc cattaatgca ttactgggtc agaatcaggt tacgctcagt
     6361 caaaccagaa gtatcgctga atatcaaaaa acaattgccg gtaacattga agagttggaa
     6421 aatatttcgc ggttaacaga gaacatactg tttcttgccc gggcagataa aaacaatgtt
     6481 ttggtgaaac tggactcgct ttctctcaat aaggaagtcg aaaatttgtt ggattatctt
     6541 gaatatcttt cagacgagaa agagatttgc tttaaggtcg agtgcaatca gcaaatcttt
     6601 gcggataaaa ttttactgca acgaatgtta tcgaatctta ttgttaatgc cattagatat
     6661 tcaccagaaa aatcgcgtat tcatataacc agttttcttg ataccaacgg ctatcttaat
     6721 attgatatcg ccagtcttgg aacgaaaata catgagcctg aaaaactctt ccgtagattt
     6781 tggcggggag ataattcgcg tcattccgta ggtcagggac ttggtctttc tttagtcaaa
     6841 gcgattgccg aattgcatgg gggaagtgct tcatatcact atctcaataa gcataatgtg
     6901 ttccgaatta cgttaccgca aagaaattaa catagggctt cagtacgcca taaattaacc
     6961 gtgaaaaaac gcagccacgt cgtgagtact aacgcggctg cgattaatta tgcgcttaca
     7021 ttcaaacgta acagggatta acccgcgtaa gctgccagca tttcctgcgc cgccagttta
     7081 cccaacgcat tcgctgcgaa aggactgtcg ccggtgagaa gtttacggtc cttatgtact
     7141 cgcccggtga tgtcgtcatt aatgatgttc atgcccattt tcttcagctc ttcgccgaag
     7201 taccaggtga gatga
//
LOCUS       DADMIB010000194         7213 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.196, whole genome shotgun sequence.
ACCESSION   DADMIB010000194 DADMIB010000000
VERSION     DADMIB010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7213)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7213)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7213
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.196"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(235..803)
                     /locus_tag="JNZ89_003862"
                     /pseudo
     CDS             complement(235..803)
                     /locus_tag="JNZ89_003862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            946..1068
                     /locus_tag="JNZ89_003863"
                     /pseudo
     CDS             946..1068
                     /locus_tag="JNZ89_003863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(1330..1896)
                     /locus_tag="JNZ89_003864"
     CDS             complement(1330..1896)
                     /locus_tag="JNZ89_003864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937582.1"
                     /translation="MLGTSFNNFGISLSHKRYFSGKVDEIIRCTMGKRIVKISSTKIN
                     TSILSSVSEQIGENITDWKNDEKKVYVSRVVNQCIDKFCAEHSRKIGDNLRKQIFKQV
                     EKDYHISLDINAAQSSINHLVSGSSYFKKKMDELCEGMNRSVKNDTTSNVANLISDQF
                     FEKNVQYIDLKKLRGNMSDYITNLESPF"
     gene            complement(2178..2492)
                     /locus_tag="JNZ89_003865"
     CDS             complement(2178..2492)
                     /locus_tag="JNZ89_003865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937583.1"
                     /translation="MLQRQRGKVGFAQLPVDFVAIEPDSAQGVGKRANLTNRCFIIRI
                     NDSFKKRQGFIEFISNSGSGHTVTVYTKRRFQRGVFMNSLNTNVVKPVMYRLRSSADA
                     RP"
     gene            complement(2570..2680)
                     /locus_tag="JNZ89_003866"
                     /pseudo
     CDS             complement(2570..2680)
                     /locus_tag="JNZ89_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(3004..3681)
                     /gene="ospD1"
                     /locus_tag="JNZ89_003867"
     CDS             complement(3004..3681)
                     /gene="ospD1"
                     /locus_tag="JNZ89_003867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspD1"
                     /protein_id="HAY8937584.1"
                     /translation="MSINNYGLHPANNKNMHLIIGSNTANENKGMKRNIINVTNTAIS
                     HAINEEKSGGGYSGVSFRKLAKIQSISIPTKNNKEYNRHNLFSLIWHGNADAARKYGE
                     SLLAAEIPKEEKLEVLAARNNAGESALFIALQEGHSAAIQAYGDFIKTFDLSPKETIK
                     LLDVRDNEGVPGLFLAAGKGNIEAMMAYINICHHSGIKLTEIADRLNNNEQDMFNIIS
                     DKIQELF"
     gene            complement(4052..4189)
                     /locus_tag="JNZ89_003868"
                     /pseudo
     CDS             complement(4052..4189)
                     /locus_tag="JNZ89_003868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011787828.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            complement(4271..4569)
                     /locus_tag="JNZ89_003869"
                     /pseudo
     CDS             complement(4271..4569)
                     /locus_tag="JNZ89_003869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343747.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5158..5317)
                     /locus_tag="JNZ89_003870"
                     /pseudo
     CDS             complement(5158..5317)
                     /locus_tag="JNZ89_003870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            complement(5321..6475)
                     /locus_tag="JNZ89_003871"
                     /pseudo
     CDS             complement(5321..6475)
                     /locus_tag="JNZ89_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(6495..6842)
                     /gene="tnpB"
                     /locus_tag="JNZ89_003872"
     CDS             complement(6495..6842)
                     /gene="tnpB"
                     /locus_tag="JNZ89_003872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000624623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8937585.1"
                     /translation="MISFPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLF
                     IFRGRRGDQIKVLWADSDGLCLFTRRLERGRFVWPVTRDGKVHLTPAQLSMLLEGIDW
                     KHPKRTERAGIRI"
     gene            complement(6842..>7213)
                     /locus_tag="JNZ89_003873"
     CDS             complement(6842..>7213)
                     /locus_tag="JNZ89_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8937586.1"
                     /translation="RPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQY
                     RKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRL
                     KGKLTPALLQILIREIKGSSH"
BASE COUNT         1861 a         1680 c         1560 g         2112 t
ORIGIN      
        1 aaaccttctc atgtttagag ttttttatta tgtttatcat aatgatatga cgatctgagt
       61 ttttaaaatc aagaagaaaa gataagtttt ttaaatgcac agtgcctgtg gataactttg
      121 cgtaaatccg gaggacagat cactctgaag caagacaaca gcatctgaaa acaatatgct
      181 cacgtttcaa ccacagggcg taagtgatcc tacccacgta atatggacac aggcctaagc
      241 gaggttctgg ttttcaaatt gttccggact gaggccgcca caccaactgt gccgtcgcca
      301 gcgattgtaa tcacattcga tataattaaa cactgttgcc cgcattattt cccggctgat
      361 aaagtgttct ccgtggagac attccacttt cagcgaatga aagaagcttt ccacgcaggc
      421 attatcgtag cagcagccct ttgcgctcat actgccacgc agattatgcc acttcagcag
      481 cgcctgataa tctgctgaac agtactgact tcctcggtcc gagtgaacga taacgttccg
      541 gggtctctta cgccgccaca gcgccatctg cagggcatcg caggccagtt gcgccgtcag
      601 gcgtggtgac atggaccagc caataacggc acgtgaccac aggtcaatga ccacaggtca
      661 atgaccacag ccagatacag ccagccttca tctgtacgta agtacgtgat gtctcccgcc
      721 cacttctggt tcggaccact ggcgtaaaaa tcctgctcca gcagattttc tgacacaggc
      781 aggccatgtg cgcggtaact gaccgtattg ctgggtaaga tcaatttgct cactggtatt
      841 tactacgtgc atcgaatgag tgatcaagag ccgtatgacg cgagagtgtc acgtacggtt
      901 ccgtgagcag ccggagagtg aaactctctc cggctgactc gactcgcagg ttccgacagc
      961 ggtgacgaac atgcagcggt gttgttctcg ctgatcggca catgccgtct gaacaatgtg
     1021 gagccagaaa aatggctgcg ttacgttatt gaacatatcc aggactgacc ggcaaaccgg
     1081 gtacgcgatc tgttgccttg gaaagttgat ctgacttctc agtaaatatc aatatgattc
     1141 tgacgagccg cttacctttg agcagagaaa ggggagaggg atcccacatc catgagctag
     1201 gaaaatacaa aaactggcta tacaacaatt caatatatta ggacttactt gcgaggagaa
     1261 atatagcacc gctcaggcaa ttcctgggta tttacttttc ttagtttctt tactcgggat
     1321 gttctgtcat cagaaaggcg attctaaatt tgtaatataa tcactcatat tcccacgtaa
     1381 tttctttaga tcaatatatt gcacattttt ctcaaaaaac tgatcggaaa taagatttgc
     1441 aacattgctt gttgtatcat ttttaacgct tctattcatc ccttcacaaa gttcgtccat
     1501 tttctttttg aaataactgc ttcctgatac aagatgattt atggaacttt gtgcagcatt
     1561 gatgtctaga gaaatgtgat aatctttctc aacctgttta aatatctgtt tacggagatt
     1621 atcgccgatt tttcggctgt gttctgcaca aaacttatca atacattggt ttaccacccg
     1681 ggatacgtag actttttttt catcattttt ccaatctgta atattttcac cgatttgttc
     1741 tgaaacagag ctcaaaatac tagtatttat tttggttgat gatattttta ctatcctttt
     1801 ccccattgta cagcggataa tctcatcaac ctttcctgaa aaatatcttt tgtgagataa
     1861 actgattcca aaattattaa aagatgttcc aagcattata atcactttgt catgtaaaat
     1921 agtaacattg tcattatttt agctgattca aacaattctg taaatgcttt gagttcttta
     1981 ctcccttggc tcaatgatgg accgtctgga atcccagaga ctaaactctc tgagaaagag
     2041 agtatgaaaa aacttggggc agtccctaaa tgaagggacc aacagcggta aaataaccgg
     2101 catcattcat aatgatgccc tgttagttgt agttatgaag atttacgtca ttaaaattgc
     2161 tgttcgtagt gtcagtccta tggtctggca tcagctgagg atcgtagccg atacatcact
     2221 ggcttcacga cattcgtgtt gaggctattc atgaaaactc cacgctgaaa acgccttttt
     2281 gtataaacgg tcacggtatg cccggagcca ctgttgctga tgaattcgat aaaaccttgg
     2341 cgtttcttga agctatcgtt aatgcggata atgaaacaac gattggtgag attcgctctt
     2401 ttgccgacac cctgggcgct gtccggttca atcgcaacaa aatcaaccgg cagctgagca
     2461 aacccaacct tgcctctctg gcgctggagc atgaagtgat ttagctggga cgtagccact
     2521 gacagcttct ataaaagtat gatcctaccc acgtaatatg aacacaggct taagtgaggt
     2581 tctggttttc aaattgttca ggactgagac ctccacacca actgtgccgt cgtcagcgat
     2641 tgtaatcgca cttgatataa ttaaacactg tatatttcat ttgtggagtc tccagtctga
     2701 gggggcttta tgcattccgt attgggcact atgatgccag aaatctgcaa ggctccacac
     2761 cttcctgtat ttcccttcct ctatcacagt gcactttact taatagggtg ggatgtgttc
     2821 attacattta ttgtgttttt tatgattgtt tttgcgtcca gtgtcgttcg tcatgggaaa
     2881 ctggttctat gggtagtatc gctcagtcta gttaactgtt tgtttctttt tagaaattaa
     2941 gcagatcaca caattcgggg agagctcctt ctaagtgcaa ttctttgcag ctatttagca
     3001 cacttaaaac aactcttgta ttttgtcaga aataatatta aacatgtctt gttcattatt
     3061 gttaagtctg tctgctattt ctgtaagttt tatcccacta tgatggcata tatttatata
     3121 tgccatcata gcctcgatat tccctttccc tgcggccaga aataatcctg gtaccccctc
     3181 attatctctt acatccaata gtttaatcgt ttcttttggt gataaatcaa aagttttaat
     3241 aaaatctcca taagcttgaa tcgcagcgga atgaccttct tgaagagcta tgaacaaagc
     3301 agattcccca gcattatttc gtgctgcaag aacttctagt ttttcctctt tgggtatttc
     3361 ggctgccaac agcgattcac cgtatttacg cgctgcatca gcatttccat gccaaatcaa
     3421 tgaaaacaaa ttatggcggt tatactcctt attattcttt gtcggaatgg atatgctctg
     3481 tattttggcc aattttctga aagaaacacc actatatccc ccccctgatt tttcttcatt
     3541 gatggcgtgg gatatagcgg tatttgtcac gttaatgata ttacgtttca ttcctttatt
     3601 ttcattagca gtattgctgc ctattattag gtgcatattt ttgttgtttg ctggatgtaa
     3661 tccatagtta tttattgaca tttttgttca tcctttttgc taaaaaaaac aataacctat
     3721 ttttgtaatg taatagatat tagtctattg ctaatctaaa aaaaccattg ccacattgaa
     3781 tggctatatt caccaataaa ttctttcgat ttcgtatatt gacatatcgt agatatatct
     3841 tatccctaag attcaataat cgagtccgtt taccattctg tgcaagcgcc ttcactcaga
     3901 agtgaccgtc aaggcgatca ccaaacttga taataaagca gctcattgcc atacgccagt
     3961 ccttaagggg cgttgtccat ttctgtgatg ctgcctagat ttaactgcct gctccggctt
     4021 atctacatct aaatatgtga gcctaatacc gctacacttt ggccagacta tgtttttctc
     4081 cgggaagtgg gctaaccgtc tccataaagt gacgaacttt tttcaacagt ggccatattg
     4141 aacggcactg atgattacgg gttattgtct catgaagagc cggccacatc actgacagca
     4201 gtgacttcag gccttcagca ccagacagcc tgaaccagtt aatccatcgc ccgacagatt
     4261 tagtaatcta gggctggttt ttcttcagct gttgcggttc gaaagtgcca ttacgatcac
     4321 gcagagtacg gatttccaga ggttcatctc cagtagtgat aatcttcgtt aagcaaccat
     4381 tgcgggaatt gctgccagat ctaagctgat ttttctcgca cccaagatga tgagtcatat
     4441 tagcattgag tacggtttca ttttcagcat ccaatcaaac tgactgagat cttcaggatt
     4501 tttgagactt ttggctagtt cattagctaa agcccgcaac ttattagatg tcaactgttt
     4561 ttcattcata aattcacctt catttgatat caaattaaat agttcaacat cagagaatta
     4621 tacaaactta tgtacaggct cctatgatct tcgaatcctg aagattatag tgaaaataag
     4681 ttttcacgtt gaaatcccac atagttagta tatgataaat aatcatggat gacctgatta
     4741 acctcttggg gtagtgcttt tatagaagaa taaatattct actaatttaa tacatcacct
     4801 aaaatagtat tgttttttat ggttggttga aggtcgtggt gatgatgtta gtccttttga
     4861 gaatattcca gtgccagatc ttacttataa taaaggggct tggcagtttg gataaactat
     4921 tgttcttatt ccactaatac aaactttttg taaagtatat taaatatact tcatttcata
     4981 ctgaaatccc cggaagtatt caatcaaaca attacaccat aaaaggaaga gggggcccta
     5041 attaagttgt caagcatgtt tatgatacct gcagggtata aattttctgg ctgcaagcag
     5101 acacatataa aacgtcttta ttgatcctac ccacataata tggacacagt cgtaagtgag
     5161 gctctggttt tcaaattgtt ccggactgag accaccacac caacggtgcc gtcgccagcg
     5221 attgtaatcg cactcgatat aactaaacac tgttgcccgc actatttccc gatggataat
     5281 agtgttctcc gtggagacat tccattttca gcgagtgaat tttcatctgt tgctgtatcc
     5341 agtcatacag tgactgcatc agtggcgcgg ctctggcttt tcttgccgcc agacgctgtt
     5401 ctgctgaaca tccccggact tctgcctcga tggcatacag ttcaccgata cgcagcaggg
     5461 cttccgttat tctgccggat tcgtacaacg cccggtaacc accgtaagca tcggcctgaa
     5521 gcactccgct gtaaccggcc agatgattct gtggatggat acctttccgg tccggtgagt
     5581 acgcgaacca gaccgccgga ggcatttccg aaccggcgtt acggtcatca cggacataga
     5641 cccacagccg ggcagttctt gttttaccac tgcccggctc ctggaccgga acggggatat
     5701 catccgcatg aactttaccg ggcatcagca catactggcg caggacgtca tacagcggct
     5761 ccagcagttc agcaacggca ccggtccagc gacccagtgt ggcacggctc agctccacgc
     5821 cctgacgacg gtatatttct gactggcggt ataacggcag atagcctgca tattttccag
     5881 cgacaacatg ggccagaagc cccgctccgg cataactgcg tgcaatgggt tttgaaggca
     5941 ccggtgcctg cacgatatgg tcacaccggc aacaggccag tttcggacgt tgtgtttcga
     6001 taaccttaaa ggcgctgctg ataagctcca gctgctctga cacatcacat cccagagaac
     6061 tgagttcgcc accacaggcc gggcagcatt cctcttccgg acggatgacc cgggtttcac
     6121 ggggaagtga ggcaggtaac ggtttacggg ctgaagactg gcgcagggga gatggcagta
     6181 ccgggtcata ttgctcaccc agcgtttccg ccatttcttc ctgaagtgcg ctgattcgct
     6241 cctgtgcttc cagtatctgc cgttcggttt ttgcgcgaag tttttctgag ctttaaccga
     6301 actgcatgcg ctgcagtttc gcaaccagcg ccttcagccg gttgatttcg gaagcataag
     6361 ccgccacccg ctgtgagagc aggcggttgt atttcgccat ctggcggatg gtgtcctgtt
     6421 gcgtctgcaa cagtgcccgc aggcgggcat tctcatgagc aagtgaggtg tccatatcct
     6481 cactttacaa cgggttatat gcggatgcca gcgcgttccg ttcgtttcgg gtgtttccag
     6541 tcgatgccct caagaagcat ggataactgg gccggagtaa ggtgcacctt gccgtcacgg
     6601 gtgaccggcc agacgaagcg gccccgctcc aggcgtctgg taaagaggca cagtccgtca
     6661 ctgtcagccc acaacacttt tatctggtca ccccggcgtc cgcggaagat gaacagatgc
     6721 ccggagaacg ggtcatcctt caggacgttc tgaacttttg aggccaggcc gttaaagcca
     6781 tttcgcatat cggtgatacc tgcaaccagc cagatacgcg aacctgcagg gaaagatatc
     6841 atcagtggct gctccctttt atttcgcgga taagtatctg taataacgcc ggcgtcagtt
     6901 tacctttaag cctgagagtt ccggccggca gaaccagctc acagcacaga ctgtcggacg
     6961 gtgtatttat ctgctctggt tcctgtgccg gagccgggat tttattatcc ggctccggcg
     7021 ttaacgtcac gggaagcagt gcaggcatat tttttccgga aggcagcagg ccacctttcc
     7081 ggtattgatg gcgccagttg aagagcaggt tatcgttgat tccgttttca cgggcgatct
     7141 gcgccacaca ggctccgggc tgcagtgact gctccactaa ggcgatttta aattcataag
     7201 gaaaattagg ccg
//
LOCUS       DADMIB010000195         7130 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.197, whole genome shotgun sequence.
ACCESSION   DADMIB010000195 DADMIB010000000
VERSION     DADMIB010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7130)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7130)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7130
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.197"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..330
                     /locus_tag="JNZ89_003874"
     CDS             <1..330
                     /locus_tag="JNZ89_003874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY8937587.1"
                     /translation="ELLMKVQLGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGS
                     SSLLTHQVKKCVQSGIKVLGLAALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASW
                     LAENLQS"
     gene            327..2327
                     /locus_tag="JNZ89_003875"
     CDS             327..2327
                     /locus_tag="JNZ89_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937588.1"
                     /translation="MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEN
                     GALIATFSDGVRTQLANGQALKEAQCSCGASGMCRHRVMLVLSYQRLCATAQPTGKEE
                     EWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSS
                     IRFARCDCIEGTLCEHVVLAVQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEG
                     KTCRQYVQQLSQALWLSGISQPLIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDA
                     FHARASHYHAGECLRQLAALNSRLNCAQEMARRDSVGEVPPVPWRTVVGSGIAGEAKL
                     DHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSF
                     QAGALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALR
                     EYLRQRPPACIRPLNQVDNLFILPVAECISLGWDSGRQTLDAQVISGEGEDNLLTLSL
                     PASACSPFAVERMAALLQQTDDPVSLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAET
                     APVAPLPSASVLPVPSTAHQLLMRCQALLIQLLHNGWRYQEQSAISQAELLANDLTAV
                     GFYRLAHVLVQFRNTESEARVEAMNNGVLLCEQLFPMLQQQG"
     gene            2452..2913
                     /locus_tag="JNZ89_003876"
     CDS             2452..2913
                     /locus_tag="JNZ89_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416627.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HAY8937589.1"
                     /translation="MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAIT
                     YVYKGDKVLKQSSETKIQFASISATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYA
                     QENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK"
     gene            complement(2954..3424)
                     /locus_tag="JNZ89_003877"
     CDS             complement(2954..3424)
                     /locus_tag="JNZ89_003877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HAY8937590.1"
                     /translation="MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKE
                     DEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTD
                     DILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS"
     gene            complement(3471..4190)
                     /gene="yehT"
                     /locus_tag="JNZ89_003878"
     CDS             complement(3471..4190)
                     /gene="yehT"
                     /locus_tag="JNZ89_003878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310963.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BtsR"
                     /protein_id="HAY8937591.1"
                     /translation="MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH
                     KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
                     IDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM
                     SGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR
                     NGLTVPVSRRYLKSLKEAIGL"
     gene            complement(4187..5872)
                     /gene="btsS"
                     /locus_tag="JNZ89_003879"
     CDS             complement(4187..5872)
                     /gene="btsS"
                     /locus_tag="JNZ89_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulatory system sensor histidine
                     kinase BtsS"
                     /protein_id="HAY8937592.1"
                     /translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF
                     LCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
                     GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA
                     IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
                     TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISST
                     YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
                     LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK
                     AVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
                     NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA
                     GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLQLPWRDEA"
     gene            6094..6159
                     /locus_tag="JNZ89_003880"
                     /pseudo
     CDS             6094..6159
                     /locus_tag="JNZ89_003880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
     gene            6387..6635
                     /locus_tag="JNZ89_003881"
     CDS             6387..6635
                     /locus_tag="JNZ89_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY8937593.1"
                     /translation="MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(6751..7020)
                     /locus_tag="JNZ89_003882"
     CDS             complement(6751..7020)
                     /locus_tag="JNZ89_003882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8937594.1"
                     /translation="MLLQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEHIAPLQD
                     AVDLEIATEEENSLLEAWKKYRVLLNCVDTSTAPDIEWPEEPDTM"
BASE COUNT         1834 a         1813 c         1734 g         1749 t
ORIGIN      
        1 gagttattaa tgaaagtaca gttgggcggc gggaccaata tcgccagtgc cgtggagtat
       61 ggtcggcaac ttattgaaca accagcgaaa agcgtcatta tcctcgtgag cgatttttac
      121 gaagggggtt catcatcatt actgacgcat caggtgaaaa agtgtgtcca gagcggcatc
      181 aaagtgctgg gactggcagc gctcgatagc acagcaacac cttgctatga ccgcgatacg
      241 gcccaggcgc tggttaatgt cggcgcacaa atagccgcca tgacaccggg cgagctggca
      301 tcatggcttg cggagaatct tcagtcatga attcactacg tccggaatta ttagaactga
      361 caccgcaggc cctgacggcg ttaagcaatg ccggttttgt taagcgcagt cttaaggaac
      421 tggaaaatgg caacgtcccg gagatcagcc atgagaacgg cgctttaatc gccaccttca
      481 gtgacggtgt ccgtacccag ctggcgaacg gccaggcact gaaagaggct cagtgcagct
      541 gcggggccag cggtatgtgc cgtcatcgcg tgatgctggt gttaagttat caacgacttt
      601 gtgctaccgc ccagcctacg ggaaaagaag aggaatggga tccggcaatc tggctggaag
      661 aactggctac ccttcccgat gccacccgca aacgcgcaca ggcgctggtc gctaaaggca
      721 tcaccattga gttgttctgt gcgccgggtg aaattccctc tgcccgctta ccgatgagcg
      781 atgtgcgttt ttattcccgc agcagtattc gtttcgcccg ttgtgattgt attgaaggca
      841 cactttgcga acatgtcgta ctggcagtac aggcctttgt ccaggcaaaa gcgcagcaag
      901 cggaattgac tcatttaatc tggcagatgc gcagcgaaca cgtcacatca tctgacgatc
      961 cgtttgccag cgaagaaggc aaaacgtgtc gtcaatatgt tcaacaacta agccaggcat
     1021 tatggctgag cggcatcagc cagccgctta ttcactacga ggccgctttc agccgcgcgc
     1081 agcaagcagc ggaacgctgc agctggcgat gggtgagtga atcgctacgg caactgcgcg
     1141 ccagcgttga tgccttccac gcccgcgcca gccactatca tgccggagaa tgcttacgtc
     1201 agcttgcggc attaaacagt cgattaaact gcgcacaaga gatggcccgg cgcgacagtg
     1261 ttggtgaagt tcctcctgtg ccgtggcgca cggtcgttgg ctctggcatt gccggagaag
     1321 caaagcttga tcatctgcgg ctggtgtctt taggtatgcg ttgctggcag gatattgagc
     1381 attatggttt acgcatctgg tttaccgatc ccgacaccgg cagtattttg catctttcgc
     1441 gtagttggcc gcgaagtgaa caggaaaact caccggcagc tacgcgtcgg ctgtttagtt
     1501 ttcaggctgg cgcactggcg ggtgggcaaa ttgtttcaca agcagcaaaa cgcagtgccg
     1561 atggcgagct gctgttagct acccgcaacc gcttaagcag cgttgtgccg ctgtcgccag
     1621 acgcctggca aatgttgagc gcgccgttac gccagccggg cattgtggct ttgcgggaat
     1681 atttacgcca gcgtcccccc gcctgcatac ggcctcttaa tcaggtggat aacttattta
     1741 ttctgccggt cgctgagtgt atttcactcg gttgggacag cggccgccag acgctggatg
     1801 cgcaggtaat cagcggcgaa ggtgaagata atctgctgac gttatccctt ccggcatctg
     1861 cctgttctcc ttttgccgtt gaacgcatgg cggcgctttt gcaacaaaca gacgaccccg
     1921 tgagtctggt ttctggcttt gtcagctttg tagaggggca attgacactg gaaccacggg
     1981 tgatgatgac aaaaacccgt gcctgggcgc tggacgcgga aactgcgcct gtggcaccgc
     2041 taccttctgc cagcgttttg cctgtgccgt ctaccgctca tcagttgctg atgcgctgcc
     2101 aggcgttact tattcaactg ctccataacg gctggcgcta tcaggaacag agcgctatta
     2161 gtcaggcaga gttgctggcg aatgacctca ccgcggtggg tttttatcgg ctggcacatg
     2221 tgttggtaca atttcgtaat acagaaagcg aggcacgggt agaagcaatg aataacggtg
     2281 ttttgctttg cgaacaatta ttccccatgc ttcagcaaca aggatgaaat agtgcttttt
     2341 actaagagtt ctactccagt tccggactgc tcacgccacg gtattaggca tatcctatat
     2401 agcccctggt gagagtcacc agtttcttga ttaaataaaa tggagtttta catgaaggct
     2461 ttcaataagc tgttttccct cgttgttgca tctgttctgg ttttctctct tgctggctgc
     2521 ggtgacaaag aagaatcgaa gaaattcagc gccaatctga acggcactga aattgccatt
     2581 acctatgtct acaaaggtga caaggtgctt aagcaatctt ctgaaaccaa aattcaattt
     2641 gcctccatta gtgcaaccac caaagaagat gctgccaaga cacttgagcc gttaagcgcc
     2701 aaatacaaaa acatcgcggg tgttgaagaa aaattaacct ataccgatac ctacgcgcag
     2761 gaaaacgtga ctatcgatat ggaaaaagtg gattttaaag ccctgcaggg tatttcagga
     2821 atcaacgttt ctgctgaaga tgccaaaaaa ggtatcacta tggcgcaaat ggaactggtg
     2881 atgaaagccg ctggttttaa agaagtgaaa taatctgtcg gcggccatgt ttcgtatggc
     2941 cgccataccc gtcttagctt ttcttcacat gctggcgcgc tgccagtcca cgcagaaaat
     3001 aacgtaaaaa ttgatcgccg cattcgcgga agtttttatg atccggtgcg cgcatcatcg
     3061 ctgtaatttc cggcatcgaa acgcggaact gctgttcggt gaggatagcc agaatgtcat
     3121 cggttttcag cgaaaacgcg atgcgtaatt ttttcagcac gatgttgtta ttaatgcgac
     3181 gttccggctc cagtgccgga gcagactcat ccttgccgcg tttttcataa atcaggccat
     3241 tgaggaatga cgacaaaaca atgtccggac aacgctgaaa accctcttcg tcttctttac
     3301 gtagccagac ggcgatctgt tccgcggtgg cttcgacatt acccagcgcc agaatacgca
     3361 ccaggtcatt attattggct ttcaaaatgt agcgcacgct gcgcagaata tcgttactta
     3421 gcatgaggcc ttcaggtgtt gatgaggcaa aaagccattt tagcagtctt ttacaggcca
     3481 atcgcctctt ttaagctttt cagataacgg cggctgaccg gcacggttaa gccattacgc
     3541 aaaatcaact cggcctggcc gttatcttcc agacgaatct cctgtaaatg cgcgaggtta
     3601 accagatact gacgatggca gcgcagtagt ggtgtacgac tttccagggt acgtaatgtc
     3661 aattcggtaa agccctcttt cccttcgtgg ctggtaacgt agacaccgct catccgactg
     3721 ctgacaaatg ccacatcttt catttgcagc aaataaatcc gactatgccc cgtacaaggg
     3781 ataaatttca gcgcctgttg attttccggt aacagcgaaa catcctgctt gctgcgctcc
     3841 tgacgcaatc gcgccagcgt tttctccagt cgcgcttcat caattggctt cagcagataa
     3901 tcaaaggcat gttcttcaaa ggctttaata gcgtattcgt caaacgcagt gagaaaaaca
     3961 atatacgggc gatgttccgg gtcaagcatc cccaccattt ccagaccact gatgcgcggc
     4021 atctggatat cgagaaacag cacatccggg cgcagtttat gcaccgcgcc gatcccttcc
     4081 acggcgtttg aacactctcc aacgatttca atatcgctct gctcctgcaa aaatacacgc
     4141 aggttctccc gtgctaacgg ttcatcatcg acaattaaga ctttaatcat gcctcgtccc
     4201 tccatggtag ttgtaacgtt attcgggtgt aactatcagg ctcacaggcg acgcttattc
     4261 catagtcatc gccaaaccgt tcacgtaaac gcttatccac cagattcatc cccagcccac
     4321 tggcattggt taccggttga tacaaaccgg cattgtcttc gatctccagc atcaaatgtt
     4381 gcccctcacg tcgggcgctg attgccactc gccctgtatc cagcagttgt gatgtcccat
     4441 gtttaatggc gttttccact atcggttgca gggtaaacgc gggcaattgc tgctgggata
     4501 attcttgcgg aatagcaatg ttgacctgca accgcgactg gaagcgcgcc ttttcaattt
     4561 gcagataagc gttcacatgt tcaatttcgt cggcgagagt aacaaactcc gaaggccgct
     4621 ttaagttttt gcggaaaaaa gtggaaagat actgcaccag ctggctggcc tgttcgctgt
     4681 cgcggcggat caccgcttta atggtgttaa gcgcattaaa caaaaaatga ggattcacct
     4741 gggcgtgaag cagtttgatt tctgactggg tgagcatcgc tttttgccgc tcatattgcc
     4801 cggcaagaat ctgcgccgaa agcagttgcg caatcccctc gcccagcgtg cggtttattg
     4861 aactgaataa acggtttttg gcttcataca atttgatggt gcccatcacc cgctgatttt
     4921 caccacgcaa cggaattacc agcgtcgacc ccagtttgca ttgcggatgc aaagagcaac
     4981 gataaggtac ttcgttgcca tcagcgtaga ccacttcacc ggtttcaatc gcttttaagg
     5041 tgtaagtcga agaaatcggt ttgccgggta aatggtggtc gtcaccaatt ccagtaaagg
     5101 ccagcaattt ctctcgatcg gtaatcgcga ctgcaccaat atccagctcc tgatacagca
     5161 cctgtgccac tttcatgctg ttcacttcgt taaacccctg gcgcaaaatg ccttccgtcg
     5221 aggcagccac tttcagcgca gtggcagaaa aagccgaagt gtatttttca aacatcgcgc
     5281 gtttatcgag caatatacgc ataaacagcg ccgcgccgac ggtattggtg accatcattg
     5341 gtgcagcaat attactcacc agacgcaccg catcttcata aggtcgggcg atcgccagga
     5401 tgatcaacat ttgcaccatt tcagcgacga acgtgacggc accggcggta atggggttaa
     5461 agactttatc agtacgcccg cgacgaatca ggatgctgtg taccaggccg ccgagcaatc
     5521 cttcaacgat ggtcgagatc atgcaactta gcgcggtcat gccccccatc gaatatcgat
     5581 gtaacccgcc ggtcaggcca accagcccac cgacgaccgg accgccgagt aagccgccca
     5641 ttaccgcgcc tatcgcacgg gtattggcaa tagaatcgtc aatgtgcaac ccaaaccagg
     5701 tgcccatgat gcagaagatg gaaaagacga tgtagcagag aaatttatgc ggcagacgaa
     5761 ccgtgacctg cattaacggt atgaataatg gcgttttact cattaaccac gcaatgacta
     5821 aaaaaacgca catctgctga agcagcagca acaccagatt aaaatcgtac atacccgcaa
     5881 accacacttc cctttaaaac gcgtaacata cattgcctgc gtttaacttt ctttgaactc
     5941 ttgcagaaaa atgagaattc gtgagtacga tcactcaaaa tcgcctggca aaaataaaat
     6001 caccctatag atgcacaaaa aacgggcaaa actacctggt tcgcaaaact gcgtctaaag
     6061 ttaaaccggg acctcgcgag caagggtgag acgatggcgc tttacacaat tggtgaagtg
     6121 gcgttgcttt gtgatattaa ccctgtcacg ttacgcgcgt gacgcaacat tttaaaaaat
     6181 cgacgaagat cgtccaggag cgccgttttt caagggttgg atagatgatt cgtttaccat
     6241 gtcgacgaac ttcgacgaat ttcgccgata aaaagtgtcc catacatgcc ccattgatgc
     6301 accataaaca atatcagaaa ttgatactgg ttatccatac agataaaaat aacacctgta
     6361 cataactaca gttacaggag ggtgttatgc gtgttgagat ctgtatcgct aaagaaaaaa
     6421 tcactaaaat gccaaacggt gctgtggatg cgttaaagga agaattaacc cgacgcatca
     6481 gtaaacgtta tgacgatgta gaggtgatcg taaaagccac cagcaacgat ggcctttctg
     6541 ttacacgcac cgcagataag gattctgcaa aaacatttgt tcaggagact ctgaaagata
     6601 cctgggagtc tgctgacgag tggtttgttc actaataaac acgtaaaatc ggtaacggct
     6661 ggaaatcatt caatactcgc actatcgaaa gtttaccagc caaccgcagc acgtcctgca
     6721 tacgtcgtgt ctacggtttt tctttttcgc ttacattgtg tctggttctt ccggccactc
     6781 aatatcaggt gcagttgatg tatcaacaca gttcagcaac acccgatact tcttccaggc
     6841 ttccagcaac gagttttctt cctccgttgc gatctccaga tctacagcat cctgaagtgg
     6901 cgcaatatgc tcactgaatt cctggatgta gaactgtgtg gtgacggtct tccagccatt
     6961 cggctcctgc tgtatcgaag cataccaggc tatttcaata tcgctatgct gcagcagcat
     7021 ttaacccctt gtaattcatc gccataattg atttaattca caaataaaac tataatatgg
     7081 tgaaattaat gaaaaaaaac acagatgatg gggctaaaat ttacacacca
//
LOCUS       DADMIB010000196         7120 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.198, whole genome shotgun sequence.
ACCESSION   DADMIB010000196 DADMIB010000000
VERSION     DADMIB010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7120
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.198"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..648
                     /locus_tag="JNZ89_003883"
     CDS             <1..648
                     /locus_tag="JNZ89_003883"
                     /EC_number="4.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709490.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HAY8937595.1"
                     /translation="TYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVV
                     QEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGH
                     AAFVDAGKLLPNIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAE
                     LLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV"
     gene            739..1986
                     /gene="tnaB"
                     /locus_tag="JNZ89_003884"
     CDS             739..1986
                     /gene="tnaB"
                     /locus_tag="JNZ89_003884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity tryptophan permease TnaB"
                     /protein_id="HAY8937596.1"
                     /translation="MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAF
                     ILIIAWFSMLHSGLLLLEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTY
                     AYISANGAIISETISMNLGYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKI
                     ISFVIVFGSFFFQVDYSILRDATSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIIC
                     YGKRKDKLIKSVVFGSLLALVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLG
                     TKQHGIIEFCLLVFSNLAVASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPP
                     ALLYLIFPNGFIYGIGGAGLCATIWAVIIPAVLAIKARKKFPNQMFTVWGGNLIPAIV
                     ILFGITVILCWFGNVFNVLPKFG"
     gene            2118..3293
                     /gene="mdtL"
                     /locus_tag="JNZ89_003885"
     CDS             2118..3293
                     /gene="mdtL"
                     /locus_tag="JNZ89_003885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtL"
                     /protein_id="HAY8937597.1"
                     /translation="MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
                     SVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQG
                     LGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLF
                     WAMAMMGIAVLMLSLFILKETRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVI
                     LTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQV
                     LFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIA
                     QVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA"
     gene            3268..4227
                     /gene="yidZ"
                     /locus_tag="JNZ89_003886"
     CDS             3268..4227
                     /gene="yidZ"
                     /locus_tag="JNZ89_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator YidZ"
                     /protein_id="HAY8937598.1"
                     /translation="MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLA
                     KLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA
                     AESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSR
                     ELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWAL
                     DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL
                     PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA"
     gene            4384..5133
                     /locus_tag="JNZ89_003887"
     CDS             4384..5133
                     /locus_tag="JNZ89_003887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709485.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937599.1"
                     /translation="MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRG
                     LLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLD
                     MELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLN
                     DDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPAIEKLSVWELDGKHSWK
                     SLPDIHSRANNPTSRMMRFAQLSTVKSFSPN"
     gene            5155..5721
                     /gene="yieF"
                     /locus_tag="JNZ89_003888"
     CDS             5155..5721
                     /gene="yieF"
                     /locus_tag="JNZ89_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent chromate oxidoreductase YieF"
                     /protein_id="HAY8937600.1"
                     /translation="MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIA
                     DIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLP
                     DQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDRQT
                     GEVIDQGTLDHLTGQLTAFGEFIQRVKI"
     gene            complement(5775..7112)
                     /locus_tag="JNZ89_003889"
     CDS             complement(5775..7112)
                     /locus_tag="JNZ89_003889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY8937601.1"
                     /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
                     IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVV
                     VQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
                     LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLG
                     WMLGDVHYNGIVSAPPSVMTVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVT
                     DKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAV
                     VVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAV
                     MMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH"
BASE COUNT         1691 a         1823 c         1803 g         1803 t
ORIGIN      
        1 acctacaaat atgccgatat gctggcgatg tccgccaaga aagatgcgat ggtgccgatg
       61 ggcggcttgc tgtgcatgaa agacgacagc ttctttgatg tgtacaccga gtgcagaacc
      121 ctttgcgtgg tgcaggaagg cttcccgaca tatggcggcc tggaaggcgg cgcgatggag
      181 cgtctggcgg taggtctgta tgacggcatg aatctcgact ggctggctta tcgtatcgcg
      241 caggtacagt atctggtcga tggtctggaa gagattggcg ttgtctgcca gcaggcgggc
      301 ggtcacgcgg cattcgttga tgccggtaaa ctgctgccga atatcccggc agaccagttc
      361 ccggcacagg cgctggcgtg cgagctgtat aaagtcgccg gtatccgtgc ggtagaaatt
      421 ggctctttcc tgttaggccg cgatccgaaa accggtaaac aactgccatg cccggctgaa
      481 ctgctgcgtt taaccattcc gcgcgcaaca tatactcaaa cacatatgga cttcattatt
      541 gaagccttta aacatgtgaa agagaacgcg gcgaatatta aaggattaac ctttacctac
      601 gaaccaaaag tattgcgtca cttcaccgca aaactgaaag aagtttaatt aatactacag
      661 agtggctata aggatgttag ccactctctt accctacatc ctcaataaca aaaatagcct
      721 tcctctaaag gtggcatcat gactgatcaa gctgaaaaaa agcactctgc attttggggt
      781 gttatggtta tagcaggtac agtaattggt ggaggtatgt ttgctttacc tgttgatctt
      841 gccggtgcct ggtttttctg gggtgccttt atccttatca ttgcctggtt ttcaatgctt
      901 cattccgggt tattgttatt agaagcaaat ttaaattatc ctgtcggctc cagttttaac
      961 accatcacca aagatttaat cggtaacacc tggaacatta tcagcggtat taccgttgcc
     1021 ttcgttctct atatcctcac ttatgcctat atctctgcta atggtgcgat cattagtgaa
     1081 acgatatcaa tgaatttggg ctatcacgct aatccacgta ttgtcgggat ctgcacagcc
     1141 attttcgttg ccagcgtatt gtggataagt tcgttagccg ccagtcgcat tacctcattg
     1201 ttcctcgggc tgaagattat ctcctttgtg atcgtgtttg gttctttctt cttccaggtc
     1261 gattactcca tcctgcgcga tgccaccagc accactgcgg gaacgtctta cttcccgtat
     1321 atctttatgg ctttgccggt gtgtctggcg tcatttggtt tccacggcaa tattcccagc
     1381 ctgattattt gctatggaaa acgcaaagat aagttaatca aaagcgtggt atttggttcg
     1441 ctgctggcgc tggtgattta tctcttctgg ctctattgca cgatggggaa tattccgcgc
     1501 gaaagcttta aggcgataat ctcctcaggc ggcaacgttg attcgctggt gaaatcgttc
     1561 ctcggcacca aacagcacgg cattatcgag ttttgcctgc tggtgttctc taacttagct
     1621 gttgccagtt cgttctttgg tgtcacgctg gggttgttcg attatctggc ggacctgttt
     1681 aagattgata actcccacgg cgggcgtttc aaaaccgtgc tgttaacctt cctgccacct
     1741 gcgttgttgt atctgatctt cccgaacggc tttatttacg ggatcggcgg tgccgggctg
     1801 tgcgccacca tctgggcggt cattattccc gcagtgcttg caatcaaagc tcgcaagaag
     1861 tttcccaatc agatgttcac ggtctggggc ggcaatctta ttccggcgat tgtcattctc
     1921 tttggtataa ccgtgatttt gtgctggttc ggcaacgtct ttaacgtgtt acctaaattt
     1981 ggctaaatcc ttcaagaagc cagccattcg ctggcttctt gcctctcagg aaatcactta
     2041 tgtccaaatg gcaactcgcc tgatcctcct tcaccacgta tgctttgcgt caccttacta
     2101 tcaggacgct ttagcccatg tcccgctttt tgatttgtag ttttgccctg gttttacttt
     2161 atcccgccgg gattgatatg tacctcgttg gtttaccgcg catcgccgcc gatctcaatg
     2221 ccagcgaagc gcagttgcat attgcgttct ccgtatatct ggcggggatg gcagctgcga
     2281 tgttatttgc cggtaaagtg gccgatcgtt cagggagaaa gccggtcgcc atacccggcg
     2341 cggcgctatt tattattgcc tcggtgttct gttcactggc tgaaaccagc acgttatttc
     2401 ttgcaggccg atttctacag gggttgggcg caggctgttg ttacgtagtg gcgttcgcca
     2461 ttttgcgcga cacgctggat gatcgacgtc gggctaaagt gctgtcatta ctcaacggta
     2521 ttacctgcat cattccggtg ttagcgccag tgctcggaca tctgattatg cttaaattcc
     2581 cgtggcagag tctgttctgg gcgatggcaa tgatgggcat cgcggtactg atgttgtctt
     2641 tgtttatttt aaaagaaacg cgcccagcgt cccccgctgc ttcggacaaa ccacgagaaa
     2701 atagcgagtc gctgcttaat cggtttttcc tcagccgtgt tgttatcacc accctcagcg
     2761 tttcggtgat cctcactttc gtcaatacat cgccggtatt gctgatggaa atcatgggtt
     2821 ttgagcgcgg agaatacgcc accattatgg cgttgaccgc tggcgtcagc atgaccgttt
     2881 cattctccac gccatttgcg ctgggaattt ttaagccacg tacgttgatg atcacctcgc
     2941 aggtgttatt ccttgcagcg gggatcaccc ttgccgtttc accttcccat gcggtttctc
     3001 tgtttggtat cacactgatt tgcgccggtt tctcggtagg ttttggcgta gcgatgagtc
     3061 aggcgttagg accattttca ttacgcgcgg gcgtagccag ctcgacctta ggtattgcgc
     3121 aggtttgcgg ttcgtcactg tggatttggc tggcagcggt ggttggtatc ggcgcatgga
     3181 atatgctgat cgggattctg attgcctgta gcatagtgag cctgttgctg attatgttcg
     3241 tcgcgcctgg acgccccgtt gccgctcatg aagaaatcca tcaccacgct tgatctcaat
     3301 ctgctgctct gtctgcaact gctgatgcag gagcgcagcg tgaccaaagc ggcgaagcgg
     3361 atgaacgtga ccccttcagc ggtgagtaag tcgctggcaa agttaagagc gtggtttgac
     3421 gacccgctct ttgtgaactc accgctgggg ctgtcgccca caccgctaat ggtcagcatg
     3481 gagcaaaatc tggcggaatg gatgcaaatg agcaatctgc tgctggataa accgcaccac
     3541 cagacaccgc gcggcctgaa gtttgagttg gcggcggaat cgccgctgat gatgatcatg
     3601 cttaatgcgc tgtcgaaacg gatctaccaa cgttacccgc aggcgaccat caaactacgt
     3661 aactgggatt acgattcctt agatgccatt actcgtggtg aagtggatat tggtttttcc
     3721 ggtcgcgaaa gccatcctcg ctcgcgggag ctgttaagct cgctaccgtt agccattgat
     3781 tatgaagtgc tgtttagtga tgtaccctgc gtctggttac gcaaagatca tccggcactg
     3841 catgaaacgt ggaatctgga caccttttta cgttatccgc atatcagcat ttgctgggaa
     3901 cagagcgaca cctgggcgct ggacaatgtg ttacaggagc tggggcgcga acgcacgatt
     3961 gctatgagcc tgccggaatt tgagcagtca ctgtttatgg ctgcgcaacc cgacaatctg
     4021 ctactggcga ccgcgccgcg ctactgtcag tactacaatc aactccatca actgccgttg
     4081 gttgctcttc ctctcccgtt tgacgaaagc cagcaaaaaa agctggaagt tccttttacc
     4141 ctgctgtggc ataaacggaa cagtcataat ccgaagatcg tctggttacg ggaaaccatt
     4201 aaaaaccttt acgcgtcgat ggcataaccg aatcgtatga aacgcgaccc aatttcacaa
     4261 taaaatgtaa aaaagttgta ataagcttgt ctgaatcgaa cttttagccg ctttagtctg
     4321 tccatcattc cagtaaatga ttactcttat attcataatg gaccattaag catggagcga
     4381 aaaatggcga ctcactttgc ccgagggatt ttaacggaag gacatctgat ttctgttcgt
     4441 ctcccctccc agtgtcatca agaagcccga aacattcccc ctcatcgtca aagccgtttt
     4501 ctggcgtcca gaggtttact cgcagaactg atgttcatgc tgtatggcat tggcgaattg
     4561 ccggaaatcg tcaccctgcc gaaaggtaaa ccggttttca gtgataaaaa tttgccttcg
     4621 ttttctattt cctatgccgg gaatatggtt ggcgtggcgt taacaaccga aggtgaatgt
     4681 ggcctcgata tggaactaca gcgtgcgacg cgcgggtttc atagcccaca cgcgcccgat
     4741 aaccacacct tttccagcaa tgaatcgcta tggatcagta aacaaaacga tcctaacgaa
     4801 gcgcgggcgc agctcatcac gctgcgccga agcgtgctaa aactaaccgg tgatgttttg
     4861 aatgacgatc cgcgcgatct gcagctgctg cccattgccg gacgcctgaa atgtgctcat
     4921 gtaaatcatg tagaagcgtt atgcgacgcg gaggacgtgc tggtgtggtc cgtggcggtc
     4981 acgcccgcga ttgaaaagct cagtgtctgg gagttagatg gcaaacacag ctggaaaagc
     5041 ctgccggata ttcacagccg cgccaacaat cctaccagcc ggatgatgcg ttttgcccag
     5101 ctctctaccg tgaagtcttt ttcgccaaat tgatagacaa ccacaggagt cattatgtct
     5161 gaaaaattgc aggtggttac gttactgggg agcctgcgca aaggctcatt taatggcatg
     5221 gttgcacgta ccctgccgaa aattgctccg gcgagcatgg aagtcaatgc gttaccttcc
     5281 attgccgaca ttcccctgta tgacgctgac gtacagcagg aagaaggttt tccagcaacg
     5341 gttgaagctc tggcggaaca gatccgtcag gctgacggtg tggtgatcgt cacgccggaa
     5401 tataactact cggtaccggg tgggctgaaa aatgccatcg actggctttc ccgcctgccg
     5461 gatcaaccgc tggccggtaa accggtgttg attcagacca gctcaatggg cgtgattggc
     5521 ggcgcgcgct gtcagtatca cctgcgccag attctggttt tcctcgatgc aatggtgatg
     5581 aacaagccgg aatttatggg cggcgtgatt cagaacaaag ttgatcggca aaccggagaa
     5641 gtgattgatc agggtacgct ggaccacctg accgggcaat tgaccgcatt tggtgagttt
     5701 attcagcgag ttaagatcta aataaaaaac ccgccagtaa tcatgcatgg cgggttttta
     5761 atgcgctatc gattttaatg agcgtcgata aatacaatct tcaggataaa cagcagcgca
     5821 acgatgatta cgcacgggct aaggtcacgc agacgcccgg taccaatctt catcacgcag
     5881 taggagataa agcccagcgc aataccttcg gtaatcgaaa agctgaacgg catcatcacg
     5941 gcggtaataa acgccggaac agattcagta agatcctgcc agttcacgcg agcaagactt
     6001 gaggtcatca acacgccaac gtagatcaac gcgccagctg cagcgtagcc tggcaccatt
     6061 cccgccagcg gcgacagaaa gataaccagc aggaacagca gaccaacaac cactgccgtc
     6121 agaccggtac gaccgccaac cgatacgccg gaagaggact caatataagc cgtaacggaa
     6181 gaagtaccga taaacgaacc ggtcacggaa gagatactgt cgacatacag cgcctgcttc
     6241 atgcgcggga atttcccctt ctcatccgcc agacctgctt tatcggtcac gccaatcagc
     6301 gtaccggagg agtcaaacaa gttgaccaac atgaaagaga aaatcacccc tgccagcccg
     6361 aggttaaacg acccggctaa atctacatga cccacaactg tcattacgct cggcggcgca
     6421 gaaacgatgc cattgtagtg cacatcaccc agcatccagc ccagcagcgt cgtcaccacg
     6481 atagaaacca gcaccgctgc gtgaatgttg cgcgaggcca gaatagcaat gatgaagaag
     6541 ccgaggatac ccagaagtac gctgtgagaa gtcagattac cgatgctcac cagcgtttcc
     6601 gagttagcga caatcacacc tgcgtttttc agccccatca tgccgataaa caggccgata
     6661 ccgctggtaa tacccacacg cagacttacc ggaatgttag caatcatcca gtaacgaacg
     6721 cggaaaatgg tcaaaagaag cagtccgaca gcgccccaga agattgcgcc cataccgatc
     6781 tgccacggca gccccattgc ctggacaacc acaaaagcga aaaaggcgtt aagccccatc
     6841 gcaggagcca gcgccaccgg aaggtttgca aacaatccca tcataatgct accgaaagca
     6901 gcaatcagac aggttgttac gaagacggca ctggtgtcca tgccagcaac gcccagaatt
     6961 tgtgggttaa caaaaacgat gtaaaccatc gtcaggaagg tggtaaaacc ggcgatcact
     7021 tcggtccgtg ccgtcgtgcc atgttcgcgc agtttaaaca cgcgttccag catcccctgg
     7081 ccagaagcct gggttgtgtg ttgttgactc attatctatt
//
LOCUS       DADMIB010000197         7056 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.199, whole genome shotgun sequence.
ACCESSION   DADMIB010000197 DADMIB010000000
VERSION     DADMIB010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7056
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.199"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            40..246
                     /locus_tag="JNZ89_003890"
                     /pseudo
     CDS             40..246
                     /locus_tag="JNZ89_003890"
                     /inference="COORDINATES: protein motif:HMM:TIGR02601.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            991..2904
                     /locus_tag="JNZ89_003891"
                     /pseudo
     CDS             991..2904
                     /locus_tag="JNZ89_003891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001306477.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(3032..3754)
                     /locus_tag="JNZ89_003892"
     CDS             complement(3032..3754)
                     /locus_tag="JNZ89_003892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-demethylubiquinone
                     3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol
                     methylase"
                     /protein_id="HAY8937602.1"
                     /translation="MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
                     LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
                     IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL
                     NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP
                     LTNTFKLGPGVDVNYMLHTQNK"
     gene            3901..6528
                     /gene="gyrA"
                     /locus_tag="JNZ89_003893"
     CDS             3901..6528
                     /gene="gyrA"
                     /locus_tag="JNZ89_003893"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HAY8937603.1"
                     /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
                     TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP
                     TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEK
                     IAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
                     VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP
                     IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL
                     TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL
                     VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG
                     KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP
                     LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL
                     IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG
                     DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI
                     TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA
                     EGDDEIAPEVDVDDEPEEE"
     gene            6677..>7056
                     /locus_tag="JNZ89_003894"
     CDS             6677..>7056
                     /locus_tag="JNZ89_003894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2138 family protein"
                     /protein_id="HAY8937604.1"
                     /translation="MSGEKKAKGWRFYGLVGFGAIVLLSAGVWALQYAGSGPEKTLSP
                     LVMHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIE
                     GSIRRIVYEHDLTLKDKLFSSLLD"
BASE COUNT         1693 a         1743 c         2013 g         1607 t
ORIGIN      
        1 ggctatggag atggtccttc cactgcggcg ggtggcttta tgtatctcgg cttaagtgaa
       61 gttacctttg atattgccga cggaaaaacg ctggttatcg gcaatacaga gaatgacgga
      121 gctgttgact ctattgctgg taccgggttg atcaccaaaa caggttccgg cgatctggta
      181 cttaatgcag ataacaatga ctttactggc gagatgcaga ttgaaaacgg tgaagttacc
      241 ctgggccgca gcaactccct gatgaatgtc ggcgatacgc attgccagga cgatccgcaa
      301 gactgctacg gtctgacgat agggagtatt gataagtacc agaatcaggc agagctaaac
      361 gttggctcca cccaacaaac ctttgtgcac tcattgacgg gctttcagaa tggcacttta
      421 aatatcgatg ctggtggcaa tgttactgtt aatcaaggta gttttgctgg caccatcgaa
      481 ggtgctggtc agctcaccat tgcgcaaaac ggcagctacg tgctgtcggg ggcgcagtcg
      541 atggcgctaa ccggcgatat agtcgttgat gatggtgcgg tgctttcgct ggaaggcgac
      601 gcggcagatc tcgccgctct ccaggacgat ccgcagtcga tcgtgttaaa cggcggtgtg
      661 ctcgatctct ctgatttctc cacctggcag agcggcacat catacaatga tggccttgaa
      721 gtcagtggca gcagcggaac ggttatcggc agtcaggatg tggtagatct tgcaggtggc
      781 gacaatttgc atatccgcgg cgacgggaaa gatggcgtct acgtggtggt cgatgcgagc
      841 gacgggcagg taagtctggc aaacaataat agttatttgg gcacaacaca aatcgcctcc
      901 ggtacgctga tggtgagcga caactcgcag cttggagata cccactataa ccgccaggtt
      961 atctttaccg ataagcaaca agaaagcgtg atggagatta ctgccaatgt cgatactcgc
     1021 tctacgacga ctgagcatgg gcgtgatatt gaaatgcgcg ccgacggtga agtggcagtt
     1081 gatgcggggg tagacacgca gtggggcgca ctgatggctg acagcagcgg gcagcatcag
     1141 gatgagggta gcacatttac taaaacgggg gcgggtacgc tggagctgac cgccagcggt
     1201 acaacgcagt cggcagtacg tgtcgaagaa ggcaccctga aaggcgatgt tgcggatatc
     1261 tttccttatg cttcgtcact gtgggtcggt gatggggcga cgttcgttac tggcgcggat
     1321 caggatattc agtctatcga tgctacttcc agcggcacta tcgatatcag cgatggtacg
     1381 gttttgcgtc tgaccgggca ggatacttcc gtcgccctta atgcctcatt gtttaacggc
     1441 gatgggacgc tggtgaatgc taccgatggc gtgacgttga caggtgagct taataccaac
     1501 cttgaaactg acagcctgac ctatcttgcc gacgtgacgg ttaatggtga tctgaccaat
     1561 acgtccggtg cggttagcct gcaaaatggc gtcgctggcg atacgctaac ggtaaacggt
     1621 gattatactg gcggcggtac gctactgttc gacagcgaat taaacggcga tgactcggta
     1681 agcgatcaat tggtgatgaa cggtaatact gctggcaaca caactgtggt ggttaactcc
     1741 attacaggga ttggtgagcc gacatcgaca ggcattaaag tggttgattt cgcagctgat
     1801 cccacgcagt ttcaaaacaa tgcacagttc agtctggctg gcagtggcta cgtcaacatg
     1861 ggagcgtatg actacacgct agtggaagat aacaacgact ggtatctgcg atcgcaagaa
     1921 gtaacgccgc catcgccacc tgatccagac ccggacccaa cacccgatcc tgacccaaca
     1981 cccgatccaa tccccgctta ccagccggtg ctgaatgcca aagttggcgg ttatctcaat
     2041 aacctgcggg cggcaaatca ggcgtttatg atggagcgac gcgatcacgc tggtggcgat
     2101 ggtcagacgc tgaatttacg tgttatcggc ggacgttatc attacacggc ggcagggcaa
     2161 ctggctcagc aggaagacac ttctacggtg cagcttagcg gcggcttgtt tagcgggcgc
     2221 tggggcacgg atggcgagtg gatgcttggg gcggttggtg gctacagtga taatcagggc
     2281 gacagccgct cgaatatgac cggaactcgc gccgataacc agaaccacgg ttatgccgtt
     2341 gggctgacct caagctggta tcagcacggt aattagaagc agggggcctg gctggatagc
     2401 tggctgcaat acgcgtggtt taacaatgat gtttccgaac atgaagatgg cgtggatcgt
     2461 taccattcgt cggggattat cgcctcgctg gaagccgggt atcagtggtt accggggcgt
     2521 ggtgtggtga ttgaaccgca ggcgcaggtg atttatcagg acgtgcagca ggatgatttt
     2581 accgccgcta accatgcgcg cgtgtcacaa tcgcaggggg atgatattca gacgcggctg
     2641 ggtttacaca gcgaatggcg taccgcggtt ggtgtcacac caacattaga tctgaattat
     2701 tatcacgatc cccatgcgac ggaaattgaa gaagatggca gcactatcag tgacgatgcg
     2761 gtgaagcgac ggggtgaaat aaaagtggga gtcacgggca atatcagtca gcgagtgtcc
     2821 ctgcgcggca gcgtggcgtg gcagaaaggg agtgatgatt ttgcccagac ggcagggttt
     2881 ttgtcgatga cggtgaaatg gtaatcactg tctagtcggc acggttgccg gatgcggcgt
     2941 aaacgcctta tccggcctac ggggagcatt tgtaggcctg ataagacgcg gcaagcgtcg
     3001 catcaggcat tggctcggcc aaacaacaac ctcacttatt ctgcgtgtgc agcatatagt
     3061 tcacatccac gccggggccg agtttaaaag tattagtgag cgggttgtaa tgtagcccag
     3121 ttatatgtcg ctctttaagg cttgtctgat ctacccagcc aagcagttct gccggtttaa
     3181 taaacttctt cacatcatgc gtgcctttgg gcaccatgcg caaaatatat tccgcgccaa
     3241 ccaccgccat cagccatgac ttgccgttgc ggttaagcgt cgagaaaaag acatcgccgc
     3301 ctggtttcac cagttgcgca caggctctga ccactgactg cggatcgggg acgtgctcca
     3361 gcatctccat gcaggtcacc acatcatact gcccggcatg ttttgccgcg tgctcttcca
     3421 cggtttcctg cacataatcc acctgaatgc cgctttccag cgcgtgcagt tttgccacct
     3481 gcaatggctc aaagcccata tccagaccgg tcaccgtcgc gccttcgcgc gccatactct
     3541 cggccagaat gccgccgcca caaccgacat cgagcacctt tttgccaaat aaaccgccag
     3601 cacgctcggc aatatagccc agacgcagcg ggttaatgcg gtgcaacggt ttgaactcac
     3661 cttcaagatc ccaccagcgg gaggcgacgg cttcaaattt agcgatctct tcgtggtcta
     3721 cgttatggtt ttccggcgat ttttcggcat tcattggcac ttctactccg taattggcaa
     3781 gacaaacgag tatatcaggc attggatgtg aataaagcgt ataggtttac ctcaaactgc
     3841 gcggctgtgt tataatttgc gacctttgaa tccgggatac agtagaggga tagcggttag
     3901 atgagcgacc ttgcgagaga aattacaccg gtcaacattg aggaagagct gaagagctcc
     3961 tatctggatt atgcgatgtc ggtcattgtt ggccgtgcgc tgccagatgt ccgagatggc
     4021 ctgaagccgg tacaccgtcg cgtactttac gccatgaacg tactaggcaa tgactggaac
     4081 aaagcctata aaaaatctgc ccgtgtcgtt ggtgacgtaa tcggtaaata ccatccccat
     4141 ggtgactcgg cggtttatga cacgatcgtc cgtatggcgc agccattctc gctgcgttac
     4201 atgctggtag acggtcaggg taacttcggt tccatcgacg gcgactctgc ggcggcaatg
     4261 cgttatacgg aaatccgtct ggcgaaaatt gcccatgaac tgatggccga tctcgaaaaa
     4321 gagacggtcg atttcgttga taactatgac ggcacggaaa aaattcccga cgtcatgcca
     4381 accaaaattc ctaacctgct ggtgaacggt tcttccggta tcgccgtagg tatggcaacc
     4441 aacatcccgc cgcacaacct gacggaagtc atcaacggtt gtctggcgta tatcgatgat
     4501 gaagacatca gcattgaagg gctgatggaa cacatcccgg ggccggactt cccgacggcg
     4561 gcaatcatta acggtcgtcg cggtattgaa gaagcttacc gtaccggtcg cggcaaggtg
     4621 tatatccgcg ctcgcgcaga agtggaagtt gacgccaaaa ccggtcgtga aaccattatc
     4681 gtccacgaaa ttccgtatca ggtaaacaaa gcgcgcctga tcgagaagat tgcggaactg
     4741 gtaaaagaaa aacgcgtgga aggcatcagc gcgctgcgtg acgagtctga caaagacggt
     4801 atgcgcatcg tgattgaagt gaaacgcgat gcggtcggtg aagttgtgct caacaacctc
     4861 tactcccaga cccagttgca ggtttctttc ggtatcaaca tggtggcatt gcaccatggt
     4921 cagccgaaga tcatgaacct gaaagacatc atcgcggcgt ttgttcgtca ccgccgtgaa
     4981 gtggtgaccc gtcgtactat tttcgaactg cgtaaagctc gcgatcgtgc tcatatcctt
     5041 gaagcattag ccgtggcgct ggcgaacatc gacccgatca tcgaactgat ccgtcatgcg
     5101 ccgacgcctg cagaagcgaa aactgcgctg gttgctaatc cgtggcagct gggcaacgtt
     5161 gccgcgatgc tcgaacgtgc tggcgacgat gctgcgcgtc cggaatggct ggagccagag
     5221 ttcggcgtgc gtgatggtct gtactacctg accgaacagc aagctcaggc gattctggat
     5281 ctgcgtttgc agaaactgac cggccttgag cacgaaaaac tgctcgacga atacaaagag
     5341 ctgctggatc agatcgcgga actgttgcgt attcttggta gcgccgatcg tttgatggaa
     5401 gtgatccgtg aagagctgga gctggttcgt gaacagttcg gtgacaaacg tcgtactgaa
     5461 atcaccgcca acagcgcaga catcaacctg gaagatctga tcactcagga agatgtggta
     5521 gtgacgctct ctcaccaggg ctacgttaag tatcagccgc tttctgaata cgaagcgcag
     5581 cgtcgtggcg ggaaaggtaa atctgccgca cgtattaaag aagaagactt tatcgaccga
     5641 ctgctggtgg cgaacactca cgaccatatt ctgtgcttct ccagccgtgg tcgcgtctat
     5701 tcgatgaaag tttatcagtt gccggaagcc actcgtggcg cgcgcggtcg tccgatcgtc
     5761 aacctgctgc cgctggagca ggacgaacgt atcactgcga tcctgccagt gaccgagttt
     5821 gaagaaggcg tgaaagtctt catggcgacc gctaacggta ccgtgaagaa aactgtcctc
     5881 accgagttca accgtctgcg taccgccggt aaagtggcga tcaaactggt tgacggcgat
     5941 gagctgatcg gcgttgacct gaccagcggc gaagacgaag taatgctgtt ctccgctgaa
     6001 ggtaaagtgg tgcgctttaa agagtcttct gtccgtgcga tgggctgcaa caccaccggt
     6061 gttcgcggta ttcgcttagg tgaaggcgat aaagtcgtct ctctgatcgt gcctcgtggc
     6121 gatggcgcaa tcctcaccgc aacacaaaac ggttacggta aacgtaccgc agtggcggaa
     6181 tacccaacca agtcgcgtgc gacgaaaggg gttatctcca tcaaggttac cgaacgtaac
     6241 ggtttagttg ttggcgcggt acaggtagat gactgcgacc agatcatgat gatcaccgat
     6301 gccggtacgc tggtacgtac tcgcgtttca gaaatcagca tcgtgggccg taacacccag
     6361 ggcgtgatcc tcatccgtac tgcggaagat gaaaacgtag tgggtctgca acgtgttgct
     6421 gaaccggttg acgaggaaga tctcgatacc atcgacggca gtgccgcgga aggggacgat
     6481 gaaatcgctc cggaagtgga cgttgacgac gagccagaag aagaataatt ttacttcttc
     6541 atgccaaaag ggagctatct cccttgtttg aattgaaaag tccaggctgc aaagtctggg
     6601 cttttgtcgt attagggcac ggtaaagttt ggctgtgccc gtaaaaaatg gctggctata
     6661 cacaaggaat gtggcaatga gtggtgaaaa aaaggcgaaa ggctggcggt tctatggtct
     6721 tgtaggtttt ggcgcaatag tactgctttc cgctggcgtc tgggcgttgc aatatgctgg
     6781 cagtgggcca gaaaaaacgt tgtcgccgct ggtgatgcac aacaatctgc aaatcgatct
     6841 caatgagccg gacctctttc tcgacagcga ctctctgagc cagcttccca aagatctcct
     6901 caccattccg tttctccacg atgttctgag tgaagatttc gttttctatt atcagaatca
     6961 tgccgatcgt ctgggcattg aaggcagcat tcgtcgcatt gtctatgaac acgatctcac
     7021 gctgaaagat aaactctttt cgtcactctt agatca
//
LOCUS       DADMIB010000198         7026 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.200, whole genome shotgun sequence.
ACCESSION   DADMIB010000198 DADMIB010000000
VERSION     DADMIB010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7026
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.200"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..247
                     /locus_tag="JNZ89_003895"
     CDS             <1..247
                     /locus_tag="JNZ89_003895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937605.1"
                     /translation="HARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILN
                     TLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR"
     gene            complement(216..1952)
                     /gene="aceK"
                     /locus_tag="JNZ89_003896"
     CDS             complement(216..1952)
                     /gene="aceK"
                     /locus_tag="JNZ89_003896"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HAY8937606.1"
                     /translation="MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQ
                     LAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESF
                     FNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDL
                     PLRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSG
                     TLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILP
                     GKTTAELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRV
                     FKVIKDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMEL
                     LLQEAAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAA
                     ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASELWYSV
                     SPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRR
                     QRFSVRYGEMLF"
     gene            complement(2233..3530)
                     /gene="aceA"
                     /locus_tag="JNZ89_003897"
                     /pseudo
     CDS             complement(2233..3530)
                     /gene="aceA"
                     /locus_tag="JNZ89_003897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418439.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
     gene            complement(3560..5161)
                     /gene="aceB"
                     /locus_tag="JNZ89_003898"
     CDS             complement(3560..5161)
                     /gene="aceB"
                     /locus_tag="JNZ89_003898"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HAY8937607.1"
                     /translation="MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQR
                     NKLLAARIQQQQDIDNGTLPDFISETASICDADWKIRGIPADLEDRRVEITGPVERKM
                     VINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNP
                     AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQS
                     WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR
                     WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFI
                     PSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEV
                     MREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAAT
                     AEISRTSIWQWIHHQKMLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFGDAA
                     RLMEQITTSDELIDFLTLPGYCLLA"
     gene            complement(5430..6359)
                     /gene="metA"
                     /locus_tag="JNZ89_003899"
     CDS             complement(5430..6359)
                     /gene="metA"
                     /locus_tag="JNZ89_003899"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HAY8937608.1"
                     /translation="MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLM
                     PKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDG
                     LIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTR
                     TDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGD
                     AYLFASKDKRIAFVTGHPEYDAQTLAQEYFRDVEAGLDPEVPYNYFPHNDPQNTPRAS
                     WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
     gene            6516..6963
                     /locus_tag="JNZ89_003900"
                     /pseudo
     CDS             6516..6963
                     /locus_tag="JNZ89_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312957.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
BASE COUNT         1684 a         1807 c         1826 g         1709 t
ORIGIN      
        1 ccatgcacgc ctgtttggat ttaccgctga agatattatg gatttttggc aacacaaagc
       61 gccacaaaaa tactctgcct ttgagttggc ttttgaattt ggtcaccggg ttattgctga
      121 attaatcctt aatacattaa ataagatggc tgaaagcttt ggctttacgg ataaccctcg
      181 atacattgcg gagaaaaatt atatggaagc tttactcaaa aaagcatctc cccataccgt
      241 acgctaaatc tttgcctgcg ccgatacgca taaacatctt ccacatgccc ttcacgtatg
      301 cggttttgta gtgcgcgcca gtaatcagcg cggaacaggt cggcgtgcat ctcttcaaac
      361 agcggaccaa tacgcgggtc ggcgcatagc cagtggcgaa actcttccgg gaaaacatcg
      421 cccggcgaga cgctgtacca cagttcgctg gcaagttcgt cttccggata gcgcggcggc
      481 gggatgtcgc ggaaattcac ttccgtcatg tagcaaattt catcgtaatc ataaaaaacc
      541 acacgcccgt gacgggtgac accgaagttt ttaaacagca tgtcgccagg aaaaatgtta
      601 gcagcggcaa gctggcgaat agcgttaccg tattcttcaa tggcgtcgcg caactgctga
      661 ccttccactt gttccagcca gatattgagc ggcaccatcc gccgctcgat atagagatgg
      721 cgaattacaa tctgctcacc aagatcggtg attttttccg ctgcttcctg gagcagtaat
      781 tccattaatg ccggggaaat atgccgcttc tccagcacaa agttttcaaa ctcctgggtg
      841 tccgccattc ggcccacacg gtcgtgctct ttcaccagtt gatagcaggc acgaacgtga
      901 gcggcagaca tctctttctg cggcgcgaac ttgtctttga tgactttgaa tacccgatca
      961 aagcccggca gcgtaaacac caacatcacc attccacgaa tacccggcgc ttcaatgaac
     1021 tgctcattac agccctgtag ataaacgaga tattcgcggt agctttcggt tttggcgtgc
     1081 ttctggcagc cgatagccat atacaattca gcagtggttt tacctggcag aatttcccgt
     1141 agccactcga ccagcgctgc gggcagcggt gcataaacca taaaataaga acgcgcaaag
     1201 ccaaaaacaa tgctcgcttc ggcggtcgtc gtcaggcagg tatcaataaa taactcgccg
     1261 tcgtccgtct ggtggatcgg cagtaagaag ggcaacgtgc cggaaggcgt gatcagtttg
     1321 cccaccagcc aggcggcttt attgcggtaa aacagttcgt tcgccacctg taaatgactt
     1381 tccgcgaggt tgtctgtccc cagcgtttcc gtcagatggc gaatgatgta atgaatgtca
     1441 cggcttttat tctgccagcg caggcgcagc ggcaggtcgc tgataacgcg catcagtaga
     1501 gattcccagc cgtgatcggg gtgaaagtct ttcgccagcg ggcggggaat ggtacgaaag
     1561 cggcgctctg gctgagagct aaagataaaa agccgctcgg gagtaagcga gcggtggtca
     1621 aataaccgac agtacacgga gttaaaaaag ctctccgcaa tctcgaagcg cgggtaatcc
     1681 ggcaacagcc gcgtgtaatg ctctttaacg cgcagtaaaa atgccgcgtc cgtactttgg
     1741 ccgttagtaa tgcagcgcag ttgctccacg accagaccaa cgtgatgatc gtaaagatgg
     1801 atacggtttt tcatcgccag ctggacagca tgccagtcgg cctgttcgaa acgctgctgc
     1861 gccccggaag tcacttcgag gaatcgacca tactgagcgt cgaagccttg caaaatggtt
     1921 tgagcaatca gtaattccag gccacgcggc atttagcgcc ctcatcagga gcagagaatt
     1981 gccggatgcg gcgtaaacgc cttatccagc ctacgttcgg caacggttgt aggcatgata
     2041 agacgcgcaa gcgtcgcatc aggcatcgtg caccgattgc cggatgcggc gtaaatgcct
     2101 tatccggcct acgttcggca acggctgtag gcatgataag acgcgcaagc gtcgcatcag
     2161 gcatcgtgca ccgattgccg gatgcggcgt gaacgcctta tccggcctac agtcagcaac
     2221 ggttgttgtt gcttagaact gcgattcttc agtggagccg gtcagcgcgg tgactgaaga
     2281 cgtgccgccc tgaataatag tcgtcacttt atcgaagtaa cctgtaccca cttcctgctg
     2341 gtgagatacg aaggtatagc catctttcgc ggcggcaaat tccggctgct gcactttctc
     2401 aacgtagtgc ttcataccct cgccctggtc ataggcgttt gccaggtcaa acatgttgaa
     2461 ccacatgctg tggatacctg ccagggtgat gaactggaac ttgtagccca tatccgacag
     2521 ctgctgctgg aagctggcaa tagttttgtc gtcgaggttt ttctgccagt tgaacgacgg
     2581 cgagcagtta taagccagca gtttgcccgg atatttcgcg tggatagctt gtgcaaagcg
     2641 acgcgccagt tccagatccg gcgtggaggt ttcacaccag accaggtcag catatggcgc
     2701 atacgccagg ccacggctga tcgcttgctc aatgcccgca tgagtacgga agaagccttc
     2761 actggtacgc tcgccggtaa taaattcgct gtcatacggg tcgcaatcgg aggtgatcag
     2821 atccgcggca tcggtacgag caaccagtag ggttggaacg cccgtcacgt cagctgccag
     2881 acgcgccgcg accagtttct gaatagcttc ttgagttggc actaaaactt tgccgcccat
     2941 gtgaccgcat ttcttcactg acgccagctg atcttcgaag tgaactgccg ctgcaccggc
     3001 ttcaatcatc gctttcatca gttcaaaggc attcaggaca ccgccaaaac cggcttccgc
     3061 atcggcaacg atcggcagga agtaatcgac atagcgcgga tcgcccggct caatgcccgc
     3121 ggaccattgg atctgatccg cacggcggaa agtattgttg atccgctcca ccacagctgg
     3181 caccgagttt gccggataga gcgactgatc cggatacatg ctggccgcca ggttagcgtc
     3241 cgccgctacc tgccatcccg acagatagac tgcttcaata cccgctttcg cctgttgcag
     3301 cgcctgaccg ccagtcagtg caccgaggct gttgatgtag cttttttcga ctcgccatgc
     3361 agcagacgcc acattctcgc cgcgcccagt tgcgccaggg tgcattcagg attgactgaa
     3421 tcgcgtaatt tcaccacatc ttccgcgctg tatgggcgag taatgccttc ccaacgcggt
     3481 tgagtccact ctttctgtaa ttcttcaatt tgttgtgtac gggttttcat gtgcagatgc
     3541 tccatagtta tgtggtggtt tacgctaaca ggcagtagcc tggcagggtc aggaaatcaa
     3601 ttaactcatc ggaagtggtg atctgttcca tcaagcgtgc ggcatcgcca aaacgcccct
     3661 gggagaaacg ttcttcgccc agttcgctgg caatgacttt catctcttcg cccagcatct
     3721 ggcggaacaa ggctttagtt accggtttgc cattgctcaa cattttttga tgatggatcc
     3781 actgccagat tgaggtacgg gaaatttcag ccgtcgccgc atcttccatc aggccataaa
     3841 tcggcacaca gccgttgcca gagatccacg cttcgatgta ctgcacggct acgcgaatat
     3901 ttgcgcgcat accttcttcg gtgcgttcac cgtcacaagg tgccagtagc tgatcggcag
     3961 taatcggcgc gtcttgttcg cgcatcactt caagctgatt tttacgggag ccgagaatgt
     4021 cgttgaatac cgccattgcc gtatccgcaa ggcctgggtg agcgatccat gtgccatcgt
     4081 gaccgttatt ggcttccagc gatttatccg cttttacttt gttgagcacc tggttattgt
     4141 gctcttcatc tttgctcgga ataaacgccg ccatgccgcc catcgcaaaa gcaccgcgtt
     4201 tatggcaggt tttaatcaac aggcgtgagt aagcattcag gaatggttta tccatcgtca
     4261 ctgcctgtct gtctggcagg acgcgatcgg gatagttttt caacgttttg atatagctga
     4321 agatgtaatc ccaacgaccg cagttcagac caacaatatg gtcacgcagc gcgtgaagga
     4381 tttcatccat ctggaacacg gcgggcagcg tttcaatcag caacgtcgcc ttgatggtgc
     4441 cgcgcggcag attaaagcga tcttctgcat agctgaagac ttcgctccac caggccgctt
     4501 cctgccagga ctgggttttc ggcagataga aatagggacc actgcccttt gccaacagag
     4561 cctgatagtt gtggaagaaa tagagcgcaa aatcaaacag gctgccgggg attgcctcac
     4621 cacgccaggt gacatgtttt tccggcaagt gcagaccgcg tacccgacaa atcaaaaccg
     4681 ctggattggg cttgagctgg taaattttgc ctgcttcatt ggtatagctg atggtaccgt
     4741 taactgcatc acgcaggtta atttgcccgt cgatcacttt gttccagtcc ggggccagtg
     4801 aatcttcgaa atcggccata aagactttca cattggcgtt gagcgcgttg atcaccatct
     4861 tgcgctctac cgggccagtt atctctacgc ggcggtcttc taagtccgca ggaatcccgc
     4921 gaattttcca atcagcatcg caaatggaag ctgtttccga aataaaatca ggcaacgttc
     4981 cgttatcaat atcttgctgc tgctgaatgc gcgctgccag aagtttattt cgttgtggcg
     5041 taaaatgcgt caccagctca gtcagaaatt ctaccgcttc ggcagtaaga atttgcttct
     5101 cctgctcgcc atacggcctt gtgaaagcca gttcatcggt tgttgttgcc tgttcagtca
     5161 tcgtgcagct cctcgtcatg gatccgaaaa cttccccact gtgaacgaag gatcgttgtg
     5221 cgcttttcgt tcagcacaac taagactact catttaaaat gcaaaatcaa aaacaatttc
     5281 cattttaatt gaaaatgctt gataacttat tgataacaat gtgaataaaa tttattcacc
     5341 tcctgaggtg cgtttcggaa ataaaaaagg cacccgaagg tgcctgaggt aaggtgctga
     5401 atcgcttaac gatcgactat cacagaagat taatccagcg ttggattcat gtgccgtaga
     5461 tcgtatggcg tgatctgata gacgtaatag ttgagccagt tggtaaacag caaattaccg
     5521 tgactacgcc agctcgctcg cggtgtattt tgcggatcat tgtgcgggaa atagttatac
     5581 ggtacttccg ggtctagtcc ggcttccaca tcgcggaaat attcctgcgc cagcgtttgc
     5641 gcatcatatt cgggatggcc cgtcacaaag gcaatgcgct tatctttgct ggcaaacaga
     5701 tatgcatccc cttcttccgt ctctgccaga atttccagat cggtgtaatc acgaatcaac
     5761 gctgccggaa agtcagcata gcgcgaatgt ggtgccagga atgaatcatc aaagccacgc
     5821 gtcagaagcg catgaggatg gagaatatga tgctcgtaaa cgccagagag tttgtcggtg
     5881 cgagtttgct taggaatgcc gtagaggata ttgagcgcgg cctgtaccgc ccagcagaca
     5941 aacagcgtcg aggtgacgtg atctttcgac cactccagca cctgtttgat ctgcggccag
     6001 taagcgacat cattaaactc caccaggccc agcggcgcac cggttacaat cagaccgtca
     6061 aagttctgtt cctgaatatc ttcaaagtta cagtagaagt tgttcagatg ctctgcgggc
     6121 gtgttgcgcg attcacggga atcgatgcgc aacagctgaa tatcgacctg caaaggtgag
     6181 tttgaaagca ggcgcagaaa ctgattttca gtttcaatct tcttcggcat caggttaagg
     6241 atcagaacct taagtggacg aatttcctga ccagacgcac gagaagttgt catcacaaag
     6301 acgttttctt cacgcaagaa attgacggcg ggtagctcgt ccggcacacg aatcggcata
     6361 acctgattac ctcactacat acacttatac gtttagacat ccagatagct gaagataacc
     6421 agaaaatttg ccaatgtcga gcctgcatgt tgaaggtgag aaagtttcaa ggaaaagact
     6481 acgttagaat ataagaatga ctaaaaggag agaaaatggt tattagtatt cgccgctcac
     6541 ggcatgagga aggggaggaa ctcgttgcga tttggtgtcg atctgtcgat gccacacacg
     6601 attttttatc agcagagtat cgggccgagc tggaggtgct agctagttcg ttccttcctg
     6661 ccggaagcgc cgttgtggat cgcggttaat gaacgggatc agccggttgg gtttatgttg
     6721 ttaagtgggc agcatatgga tgcgctgttt atcgatcctg atgtgtgcgg ctgcggcgtg
     6781 ggtcggatgc tggtggagca tgcgctctcg atggcaccgg aactgacaac caacgttaat
     6841 gagcaaaatg agcaggcggt tgggttctat aagaaggtgg gttttaaggt tacgggacgc
     6901 tctgaggtgg acgatttggg gaaaccgtat ccgttgctga atctggcgta cgtgggggaa
     6961 taagccgccc ctgccgtgcc tgcccaggct ggagaagacg cgccagcgtc gcacccggca
     7021 tttttt
//
LOCUS       DADMIB010000199         6801 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.201, whole genome shotgun sequence.
ACCESSION   DADMIB010000199 DADMIB010000000
VERSION     DADMIB010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6801
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.201"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            187..2103
                     /gene="dnaK"
                     /locus_tag="JNZ89_003901"
     CDS             187..2103
                     /gene="dnaK"
                     /locus_tag="JNZ89_003901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HAY8937609.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ
                     DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW
                     VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
                     LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
                     QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
                     DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
                     DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD
                     NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
                     EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
                     SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD
                     DVVDAEFEEVKDKK"
     gene            2192..3322
                     /gene="dnaJ"
                     /locus_tag="JNZ89_003902"
     CDS             2192..3322
                     /gene="dnaJ"
                     /locus_tag="JNZ89_003902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HAY8937610.1"
                     /translation="MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
                     AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF
                     GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT
                     CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA
                     GVDTGDRIRLAGEGEAGQHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL
                     GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN
                     EKQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR"
     gene            complement(3426..3635)
                     /gene="mokC"
                     /locus_tag="JNZ89_003903"
     CDS             complement(3426..3635)
                     /gene="mokC"
                     /locus_tag="JNZ89_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin MokC"
                     /protein_id="HAY8937611.1"
                     /translation="MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVT
                     RKDLCEVHIRTGQTEVAVFTAYESE"
     gene            4164..5330
                     /gene="nhaA"
                     /locus_tag="JNZ89_003904"
     CDS             4164..5330
                     /gene="nhaA"
                     /locus_tag="JNZ89_003904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HAY8937612.1"
                     /translation="MKHLHRFFSSDASGGIILIIAAILAMMMANSGATSGWYHDFLET
                     PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI
                     GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
                     IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA
                     VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
                     QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMAVGIL
                     CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV"
     gene            5396..6295
                     /gene="nhaR"
                     /locus_tag="JNZ89_003905"
     CDS             5396..6295
                     /gene="nhaR"
                     /locus_tag="JNZ89_003905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705976.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HAY8937613.1"
                     /translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE
                     RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA
                     LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL
                     FSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEI
                     LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM
                     IQHPAVQRICNTDYSALFSPAAR"
     gene            complement(6333..>6801)
                     /locus_tag="JNZ89_003906"
     CDS             complement(6333..>6801)
                     /locus_tag="JNZ89_003906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000871680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937614.1"
                     /translation="RFNYNLNTILLVNLMTCGFEDQSIDTGRFVLSRINNENYQFHHI
                     RFDCIQGEQGELVFEPSDVEYYFEPVTIQESGTSILKNELENSEDGAGQVGFQLSNDG
                     TNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVSSGQIMSRVKIVVMYN"
BASE COUNT         1738 a         1601 c         1757 g         1705 t
ORIGIN      
        1 tctgcgcaaa agcacaaaaa atttttgcat ctcccccttg atgacgtggg ttacgacccc
       61 atttagtagt caaccgcagt gagtgagtct gcaaaaaaat gaaattgggc agttgaaacc
      121 agacatttcg cccctattac agactcacaa ccacatgatg accgaatata tagtggagac
      181 gtttagatgg gtaaaataat tggtatcgac ctgggtacta ccaactcttg tgtagcgatt
      241 atggatggca ccactcctcg cgtgctggag aacgccgaag gcgatcgcac cacgccttct
      301 attattgcct atacccagga tggtgaaact ctggttggtc agccggctaa acgtcaggca
      361 gtgacgaacc cgcaaaacac cctgtttgcg attaaacgcc tgattggccg ccgcttccag
      421 gacgaagaag tacagcgtga tgtttccatc atgccgttca aaattattgc tgctgataac
      481 ggcgacgcat gggtcgaagt taaaggccag aaaatggcac cgccgcagat ttctgctgaa
      541 gtgctgaaaa aaatgaagaa aaccgctgaa gattacttgg gtgaaccggt aactgaagct
      601 gttatcaccg taccggcata ctttaacgat gctcagcgtc aggcaaccaa agacgcaggc
      661 cgtatcgctg gtctggaagt aaaacgtatc atcaacgaac cgaccgcagc tgcgctggct
      721 tacggtctgg acaaaggtac tggcaaccgt actatcgcgg tttatgacct ggggggtggt
      781 actttcgata tttctattat cgaaatcgac gaagttgatg gcgaaaaaac cttcgaagtt
      841 ctggctacca acggtgatac ccacctgggt ggtgaagact tcgacagccg tctgatcaac
      901 tacctggttg aagaattcaa gaaagatcag ggcattgacc tgcgcaacga tccgctggca
      961 atgcagcgcc tgaaagaagc ggcagaaaaa gcgaaaatcg aactgtcttc cgctcagcag
     1021 accgacgtta acctgccgta catcactgca gatgcgaccg gtccgaaaca catgaacatc
     1081 aaagtgactc gtgcgaaact ggaaagcttg gttgaagatc tggtaaaccg ttccattgag
     1141 ccgctgaaag ttgcactgca ggacgctggc ctgtccgtat ctgatatcga cgacgttatc
     1201 ctcgttggtg gtcagactcg tatgccaatg gttcagaaga aagttgctga gttctttggt
     1261 aaagagccgc gtaaagacgt taacccggac gaagctgtag caatcggtgc tgctgttcag
     1321 ggtggtgttc tgactggtga cgtgaaagac gtactgctgc tggacgttac cccgctgtct
     1381 ctgggtatcg aaaccatggg cggtgtgatg acgacgctga tcgcgaaaaa caccactatc
     1441 ccgaccaagc acagccaggt gttctctacc gctgaagaca accagtctgc ggtaaccatc
     1501 catgtgctgc agggtgaacg taaacgtgcg gctgataaca aatctctggg tcagttcaac
     1561 ctggatggta tcaacccggc accgcgcggc atgccgcaga tcgaagttac cttcgatatc
     1621 gatgctgacg gtatcctgca cgtttccgcg aaagataaaa acagcggtaa agagcagaag
     1681 atcaccatca aggcttcttc tggtctgaac gaagatgaaa tccagaaaat ggtacgcgac
     1741 gcagaagcta acgccgaagc tgaccgtaag tttgaagagc tggtacagac tcgcaaccag
     1801 ggcgaccatc tgctgcacag cacccgtaag caggttgaag aagcaggcga caaactgccg
     1861 gctgacgaca aaactgctat cgagtctgca ctgactgcac tggaaactgc tctgaaaggt
     1921 gaagacaaag ccgctatcga agcgaaaatg caggagctgg cacaggtttc ccagaaactg
     1981 atggaaatcg cccagcagca acatgcccag cagcagactg ccggtgctga tgcttctgca
     2041 aacaacgcga aagatgacga tgttgtcgac gctgaatttg aagaagtcaa agacaaaaaa
     2101 taatcgccct ataaacgggt aattatactg acacgggcga aggggaattt cctctccgcc
     2161 cgtgcattca tctaggggca atttaaaaaa gatggctaag caagattatt acgagatttt
     2221 aggcgtttcc aaaacagcgg aagagcgtga aatcaaaaag gcctacaaac gcctggccat
     2281 gaaataccac ccggaccgta accagggtga caaagaggcc gaggcgaaat ttaaagagat
     2341 caaggaagct tatgaagttc tgaccgactc gcaaaaacgt gcggcatacg atcagtatgg
     2401 tcatgctgcg tttgagcaag gcggcatggg cggcggcggt tttggcggcg gcgcagactt
     2461 cagcgatatt tttggtgacg ttttcggcga tatttttggc ggcggacgtg gtcgtcaacg
     2521 tgcggcgcgc ggtgctgatt tacgctataa catggagctc accctcgaag aagctgtacg
     2581 tggcgtgacc aaagagatcc gcattccgac tctggaagag tgtgacgttt gccacggtag
     2641 cggtgcaaaa ccaggtacac agccgcagac ctgtccgacc tgtcatggtt ctggtcaggt
     2701 gcagatgcgt cagggtttct ttgccgtgca gcagacctgt ccacactgtc agggccgcgg
     2761 tacgctgatc aaagatccgt gcaacaaatg tcatggtcat ggtcgtgttg agcgcagcaa
     2821 aacgctgtcc gttaaaatcc cggcaggggt ggacactgga gaccgcatcc gtcttgcggg
     2881 cgaaggtgaa gcgggccagc atggcgcacc ggcaggcgat ctgtacgttc aggttcaggt
     2941 taaacagcac ccgattttcg agcgtgaagg caacaacctg tattgcgaag tcccgatcaa
     3001 cttcgctatg gcggcgctgg gtggcgaaat cgaagtaccg acccttgatg gtcgcgtcaa
     3061 actgaaagtg cctggcgaaa cccagaccgg taagcttttc cgtatgcgcg gtaaaggcgt
     3121 caagtctgtc cgcggtggcg cacagggtga tttgctgtgc cgcgttgtcg tcgaaacacc
     3181 ggtaggcctg aacgagaagc agaaacagct gctgcaagag ctgcaagaaa gcttcggtgg
     3241 cccaaccggc gagcacaaca gcccgcgctc aaagagcttc tttgatggtg tgaagaagtt
     3301 ttttgacgac ctgacccgct aacctcccca aaagcctgcc cgtgggcagg cctgggtaaa
     3361 aatagggtgc gttgaagata tgcgagcacc tgtaaagtgg cggggatcac tccccgccgt
     3421 tgctcttact cggattcgta agccgtgaaa acagcaacct ccgtctggcc agttcggatg
     3481 tgaacctcac agaggtcttt tctcgttacc agcgccgcca ctacggcggt gatacagatg
     3541 acgatcaggg cgacaatcat cgccttatgc tgcttcattg ctctcttctc cttgacctta
     3601 cggtcagtaa gaggcactct acatgtgttc agcatatagg gggcctcggg ttgatggtaa
     3661 aatatcactc ggggcttttc tctatctgcc gttcagctaa tgcctgagac agacagcctc
     3721 aagcacccgc cgctattata tcgctctctt taacccattt tgttttatcg attctaatcc
     3781 tgaagacgcc tcgcattttt gtggcgtaat tttttaatga tttaattatt taactttaat
     3841 ttatctcttt atcgcaatta ttgacgacaa gctggattat ttttgaaata ttgtcctaac
     3901 aaataacgcc gactgacaag aaattaatta ttacttttcc taattaatcc ctcagaaatc
     3961 ctcaccttaa gctatgatta tctgagctta gggtcactcg tcagcgctta cagccgtcaa
     4021 aaactcatct caccgctgat ggcgaaaatt ctacaaaggc tcgtaaaaaa cgaattattc
     4081 ctacactata atctgatttt aacgatgatt cgtgcggggt aaaatagtaa aaacgattta
     4141 ttcacctgaa agagaaataa aaagtgaaac atctgcatcg attctttagc agtgatgcct
     4201 cgggaggcat tattcttatc attgccgcta tcctggcgat gatgatggcc aacagcggcg
     4261 caaccagtgg atggtatcac gactttctgg agacgccggt tcagctccgg gttggttcac
     4321 tcgaaatcaa caaaaacatg ctgttatgga taaatgacgc gctgatggcg gtatttttcc
     4381 tgttagtcgg tctggaagtt aaacgtgaac tgatgcaagg atcgctagcc agcttacgcc
     4441 aggccgcatt tccagttatc gccgctattg gtgggatgat tgtgccggca ttactctatc
     4501 tggcctttaa ctatgccgat ccgattaccc gcgaagggtg ggcgatcccg gcggctactg
     4561 acattgcctt tgcacttgga gtgctggcgc tgttgggaag tcgtgttccg ttagcactga
     4621 agatcttttt gatggctctg gctattatcg acgatcttgg ggccatcatt atcatcgcat
     4681 tgttctacac taatgactta tcgatggcct ctcttggcgt cgcggctgta gcaattgcgg
     4741 tactcgcggt attgaatctg tgtggtgtac gccgcacggg cgtctatatt ctggttggcg
     4801 tagtgttgtg gactgcggtg ttgaaatcgg gggttcacgc aaccttggcg ggggtaattg
     4861 tcggcttctt tattcctttg aaagagaagc atgggcgttc tccagcgaag cgactggagc
     4921 atgtgttaca cccgtgggtg gcgtatctga ttttgccgct gtttgcattt gctaatgctg
     4981 gcgtttcact gcaaggcgtc acgctggatg gcttgacctc cattctgcca ttggggatca
     5041 tcgctggctt gctgattggc aaaccgctgg ggattagtct gttctgctgg ttggcgctgc
     5101 gtttgaaact ggcgcatctg cctgagggaa cgacttatca gcaaattatg gcggtgggga
     5161 tcctgtgcgg tatcggtttt actatgtcta tctttattgc cagcctggcc tttggtagcg
     5221 tagatccaga actgattaac tgggcgaaac tcggtatcct ggtcggttct atctcttcgg
     5281 cggtaattgg atacagctgg ttacgcgttc gtttgcgtcc atcagtgtga caggacggtt
     5341 taccggggag ccataaacgg ctcccttttc attgttatca gggagagaaa tgagcatgtc
     5401 tcatatcaat tacaaccact tgtattactt ctggcatgtc tataaagaag gttccgtggt
     5461 tggcgcagcg gaggcgcttt atttaactcc acaaaccatt accggacaga tccgggctct
     5521 ggaagagcgc ctgcaaggca aattatttaa gcgcaaggga cgtggtctcg aacccagcga
     5581 gctgggagaa ctggtctatc gctatgccga taaaatgttc accttaagcc aggaaatgct
     5641 ggatattgtg aactatcgca aagaatccaa tttattgttt gacgttggcg tggctgatgc
     5701 actttccaaa cgcctggtca gtagcgtgct gaatgctgca gtggtagaag gcgagccgat
     5761 tcatcttcgc tgcttcgaat ccacccacga aatgctactg gagcaattaa gccagcataa
     5821 actggatatg atcatttccg actgtccgat agactctacg cagcaggaag gcctgttctc
     5881 cgtgagaatt ggcgaatgtg gcgtgagttt ctggtgtaca aatccaccac cagaaaaacc
     5941 gttcccggct tgtctggaag aacggcgact tttgattcct gggcgacgtt caatgttagg
     6001 gcgcaaattg cttaactggt ttaactccca gggattaaac gtagaaatcc tcggcgagtt
     6061 tgatgatgcc gcgttgatga aagcttttgg tgcaatgcac aatgcaatct tcgttgcccc
     6121 aacgctttat gcatatgact tttatgccga taaaactgtc gtagaaattg gtcgcgtcga
     6181 gaatgtgatg gaagagtacc atgctatttt tgctgagcgg atgattcagc acccggcggt
     6241 acagcgaatc tgcaatacgg attattctgc gctttttagt ccagcggcgc gttaatcggc
     6301 agctccccca aagttaaagt ggaggagata gattagttgt acataaccac gattttgact
     6361 cggctcatta tttgcccgct tgagacatta tttccatatg tacgcgggcg aataaataga
     6421 ggaatctgat tacttccttc atggggatgc tgaaaagagt agtaattgct tttaccatac
     6481 tggatttcat tcgtaccatc attggagagt tgaaagccta cttgacccgc accgtcctca
     6541 ctgttttcta actcattttt taatatgctg gttcctgact cctgtatcgt cactggttca
     6601 aagtaatatt caacatcact gggttcaaaa actaattcac cttgctcgcc ctggatgcag
     6661 tcaaatctta tatgatgaaa ctgataattt tcattattga tacgagacag tacaaatcgt
     6721 ccagtgtcga tggattgatc ttcaaaacca caggtcatta aatttaccag taaaatagta
     6781 tttaaattat aattaaagcg g
//
LOCUS       DADMIB010000200         6798 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.202, whole genome shotgun sequence.
ACCESSION   DADMIB010000200 DADMIB010000000
VERSION     DADMIB010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6798
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.202"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            174..902
                     /gene="mpaA"
                     /locus_tag="JNZ89_003907"
     CDS             174..902
                     /gene="mpaA"
                     /locus_tag="JNZ89_003907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415842.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide amidase MpaA"
                     /protein_id="HAY8937615.1"
                     /translation="MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLI
                     LAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFP
                     AANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
                     ACIEDPRHSELGEWLAQAFELPLVTSVGYETPSSFGSWCADLNLHCITAEFPPISSDE
                     ASEKYLFAMANLLRWHPKDAIRPS"
     gene            complement(877..1791)
                     /gene="ycjG"
                     /locus_tag="JNZ89_003908"
                     /pseudo
     CDS             complement(877..1791)
                     /gene="ycjG"
                     /locus_tag="JNZ89_003908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001338538.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
     gene            1961..2467
                     /gene="tpx"
                     /locus_tag="JNZ89_003909"
     CDS             1961..2467
                     /gene="tpx"
                     /locus_tag="JNZ89_003909"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HAY8937616.1"
                     /translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA
                     GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN
                     VITLSTFRNAEFLQAFGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
                     AALAVLKA"
     gene            complement(2511..4052)
                     /gene="tyrR"
                     /locus_tag="JNZ89_003910"
     CDS             complement(2511..4052)
                     /gene="tyrR"
                     /locus_tag="JNZ89_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TyrR"
                     /protein_id="HAY8937617.1"
                     /translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA
                     ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV
                     DMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME
                     ITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE
                     QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF
                     GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR
                     VICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
                     GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
                     AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ
                     KKNEE"
     gene            complement(4200..5261)
                     /locus_tag="JNZ89_003911"
     CDS             complement(4200..5261)
                     /locus_tag="JNZ89_003911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HAY8937618.1"
                     /translation="MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDE
                     APEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVAL
                     GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ
                     QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREICRSAAESTLMI
                     AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR
                     EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRR
                     QLIGQVKETLQKGKTPSEK"
     gene            complement(5258..6655)
                     /locus_tag="JNZ89_003912"
     CDS             complement(5258..6655)
                     /locus_tag="JNZ89_003912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HAY8937619.1"
                     /translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
                     NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV
                     SEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL
                     NGQRGEWSVKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVL
                     PGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF
                     LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
                     AATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNG
                     EKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
                     RLDAALEFLIGDKLR"
BASE COUNT         1624 a         1936 c         1661 g         1577 t
ORIGIN      
        1 cgacttacat ctaagtcagc ataattctaa tatctgcaca tcaataaaaa tgcaaacaac
       61 ttccggcaaa aaaagtgata caagatcgat gacatagcgt tgaagaaaag gatttgataa
      121 tccgcaaaat ttgcacaaca ctgcctgtaa tacttcctga accagagacg atcatgaccg
      181 taacccgccc acgcgccgaa cgcggcgcat ttccgcccgg aacagaacat tacggacgtt
      241 cattattggg cgcgccgtta atctggtttc ctgcccctgc agccagccgc gaaagtggtt
      301 tgattctggc tggcactcac ggtgatgaaa actcttcggt cgtcacgctc tcctgtgctc
      361 tgcggacgtt gacaccttct ttgcgccgcc atcatgtggt gctgtgtgtg aatcctgacg
      421 gctgccagct ggggttacgg gccaatgcta atggtgtgga tttaaacaga aactttccgg
      481 cggcgaactg gaaggaaggt gaaacggttt atcgctggaa cagcgccgct gaagaacgtg
      541 atgtcgtatt actgacaggt gacaaacctg gctcagaacc tgaaacccag gcgctgtgcc
      601 agcttataca ccgcattcaa cctgcctggg tggtctcatt ccacgatcca ctggcctgta
      661 ttgaagatcc cagacacagc gaattaggcg aatggctggc ccaggcgttt gaattgcctc
      721 tggtaaccag cgtcggttat gaaacgccta gctctttcgg cagttggtgt gcagatctca
      781 acttgcattg catcaccgca gagtttccgc ccatctcctc cgacgaagcc agcgaaaaat
      841 atctctttgc gatggcaaac ttgctgcgct ggcatcctaa agatgcaatt cgcccgtcgt
      901 gaactgaagc gccggttcca catctaccgc cagccaggtc ggtccgtcaa gatcggcgaa
      961 actgacctgc ggcaccagcg gtaaagcggc gctaatggca cgagaggtac acaacatgca
     1021 gcccagcatc agactgaaac cttgtgcacg cgcttcagtc gccagcgcca gcgcttccgt
     1081 cagaccaccg gttttatcga gcttaatgtt aaccatctca tagcgccctt tcagcgcctt
     1141 cagattgcta cgtgtatgac aactctcatc agcacaaatc ggcaacggat gaataaaatt
     1201 ctccagcgcc gcatcgtcct gcgcaggaag gggttgttca agcatcgcaa cgcctaaatc
     1261 cgccaatagc tggcaacgcg ccgccaaccc ttatgcacgc caggattcat ttgcatcaac
     1321 gatcagcgtc gcatcgggca cagctgtgcg aattgccacc atccgctcac taataagatg
     1381 gttatccagc ttcactttca gtaatttcgc gcctgcctgc cagagtgttg atgcactatt
     1441 ggccatctga tcaggcgtac cgatgactac cgtctgtgca gtgataactg tctcgggaag
     1501 cgttatgccg atcaaatcag ccagcgattg ctgctgtttt cgcgcggcca gatcccacaa
     1561 tgcacaatcc agcgcattac gtgctgcgcc ggcagggaga attttttgca actcctcccg
     1621 tgtcagccct ttctctaatt gcgacacgac gctcataatt tgcgccatta ccgaggcatc
     1681 actttctcca taacgcggat acggcgtgca ttcgccggtg cctttaatac cctcttcttc
     1741 cagttcaacc accaccacgc gcgcttcact gcgacttccc cgggcaatca caaacggggt
     1801 atgtaagggc taggcttcct caaatacctt aacggttctc atctttactc cttgttgtcg
     1861 cggtggtctg cggattaagc gcaaatagcg tttgctgtgt tattgacagt tagcataaac
     1921 taggtgtgac gttaactata tgtaaacagg aaagataatc atgtcacaaa ccgttcattt
     1981 ccagggcaac ccggttacag tcgccaattc catcccgcag gcgggtagca aagcgcagac
     2041 ttttactctc gtggcaaaag atctgtctga cgtcaccctc ggtcagtttg cgggtaaacg
     2101 caaagtgctg aacattttcc cgagtattga taccggtgtt tgcgccgcat cagtacgtaa
     2161 gtttaaccaa ctggcaaccg agatcgacaa caccgttgtg ctgtgtattt ctgccgatct
     2221 gccgttcgcc cagtctcgtt tctgcggcgc agaaggtctg aacaacgtta tcaccctctc
     2281 cactttccgt aacgctgaat ttctgcaagc cttcggtgtg gcaattgctg atggcccact
     2341 gaaaggtctg gcagcgcgtg ccgttgtggt tattgacgaa aatgacaatg tgattttcag
     2401 ccagctggtg gatgaaatca ccaccgagcc ggattacgaa gcagctctgg ctgtactgaa
     2461 agcataagtt aatatgcctg atggtgttgc accatcaggc atattcgcgc ttactcttcg
     2521 ttcttcttct ggcttaagcc atattcccgc aacttattgg caatcgcggt atgtgaaacg
     2581 ccgagacgtt ttgccagttt gcgcgtgctg ggataattgc gataaagctg ggttaatacc
     2641 gagcgttcaa aacggctggt gatttcgtcc agcgaacctt ccatcgcatc ttcgcccacg
     2701 gctaccgttg cggcgtcata atccggcaac aaaatatcct gtggacgcag ctcataaccg
     2761 tccagttgtg tcagtgcgcg atatatagcg ttctttaact gccgcacatt tcccggccac
     2821 gcataacgcg taagtacagt attcaggtca gcggccagtt tcggacgcgg cacgccctgc
     2881 tcgtcggcaa agcgggcgac gaacagctca gttaacggca tgatgtcctg cggacagtca
     2941 cgtagcggcg gcagattgag cgtcaacacg ttcagacgat aatagagatc ttcacggaac
     3001 atgccttttt gcaccagttc gaccagattc ttctgcgtag cgcaaatcac ccgcacatcg
     3061 acatgcacct catggtcttc gccaacccga cggaaagtgc catcattaag aaaacgcagt
     3121 aatttcgcct gcatccgtgg tgacatttcc cctatttcat ccaacagcac cgaaccaccg
     3181 ttcgcctgct caaagaatcc tttcttccct tccggagcat gaccaaacag ttcactctcg
     3241 accgcatctt ccggtataga cgcacagttc agcgccaggt aaggtttgcc cgctctgggg
     3301 cttgcctgat ggcaggcgta ggcaaagaga tctttacctg tacctgtgtc acccgtaatc
     3361 agcagcggcg cgcttagcat cgccagtttc tgcgcctgtt cgacaacatg cttcattttc
     3421 gggctgacgg cgacaatttg actgaaggcg ctgacgtcct gggcggcgac attttgcaac
     3481 tggcggccca tacgaatcgt tgatcgcaac atcaccaccg caccggtcag gacgtgttga
     3541 tcattttcat cctgaagata aacaggcgta atctccatca ggaaattctg cccattaata
     3601 acgacatgct cgttatgcga atcttgcggt tcgctttcca gccaacgtaa aaaattaaag
     3661 ccgttaatca attgtgcggc ggtatggttg cgcaggcgat ccaatttttg cccaaaaagc
     3721 tgacagctcg ccgggttcgc catatccact ttgcttttca tatcgacaga gagcacaggt
     3781 tcgggcaacg cctccagtaa cgcgctcaac gccagatgct cacgttcgga aggcatccac
     3841 gggacagtac gcacatcggt aacacctgca atacggcgta tttcggccat cagactgctg
     3901 aaactctcaa actccagttc agcaaaattg aggtagattc gcccaatggg atcaatctca
     3961 ataccgcgta aatcaatgcc tcttagcacg agtagatcga gtaattcgcg ggtcagaccg
     4021 agtcggtctt cacaaaagac ttccagacgc atgggaacct tcacctgaaa aaagaacaat
     4081 taatatgatg atatgacact atttggatag caggaaggtt tctgtcaaca atcattgaca
     4141 caaagacgga aaaacgggca cttcggcgta aagatatccg gtcagcaccc gatattgcat
     4201 tatttttcgc tgggcgtttt gcctttttgc agcgtttctt tcacctgacc gataagctga
     4261 cgacggaaat ccccgaggcg aggtttgtca tcgtcaatcc acggcagcgg gcggcaaagc
     4321 tccatagctt taatcccgag tcgtgccgtc agaagtccag caccaattcc ctgagctgcg
     4381 cgggtagaca aacgagcagc gagatcttgc gacatccagt ccatccccac ttcgcgcacc
     4441 agttcgctgg ctccggcaaa agcgatattc agcaatacca gcttaaacag acgcaaacgg
     4501 ctgtaatacc ccagttcaat gccatacagc gtggcgatgc gattaattaa acgcagattg
     4561 cgccaggcga taaacgccat atcgaccaac gccagcgggc tgaccgcaat catcaacgtt
     4621 gattccgccg ccgaacggca gatttcgcgc cgcgcctggg catctaaaac tggctggacc
     4681 aaatgcgcat acaaactgac cacttcacgg tcgttttgcg tttcatggat tgaggcatac
     4741 cagcgttgca gcgctggatg agactgatca atacccgcct gctgcgccag tttttcgcaa
     4801 aatgcgcggc ctttgcccgt gccgtggctg tgcaacaaat cgcgcgcttc gtcgcgttca
     4861 tgggcgcgct gtcgcaagcg ccataagcgc cgccactctg ttaccacaga acctacgcca
     4921 gcgccgataa tcaatgcccc agcggcacat ccacccagcg ccacccagtc ctgagtttgc
     4981 caggcattca ttgtccactg tacaccctgc ccgacaacgc ttgcgccaaa cagagccagc
     5041 ccgcccatca ccattttgcg ccacaggctg cgtttcggac gtaacgctgc atccattacc
     5101 gcttcaactt gcccctcttc ttcaggcgct tcatcgagcg tggccggggc aaaattttgc
     5161 gcctgatttt cgtcaaaggt ctgctgcgcc ctgaattttg gattctgatc gacctccagc
     5221 ggaccgtcga aatcaatacg tggttttaac ggttcggtca tcgcaattta tctcctatta
     5281 aaaattccag cgcggcatca agacgaatat gcggcagcgg tttgtcgaca tccatcacct
     5341 gcgggcgaaa cgcttcaaac tggaaccctt gtttgtccca gaacgcctga ccgggcaaac
     5401 gcgcaggaac ttcaccggga taaacggtga gtggcgcacc atcgctgagc cggttaccgc
     5461 gcaatgccgg aattttctcg ccgttgacgt caataatgcc gctggtggtc gcctgcaccg
     5521 aggccagccc caggcaatcc atactaatcc cttcaaacgc cgcattttgc caggcatcct
     5581 gaatcagttg ttgcagtaat gaaaccatat tggcgtgctg atcgatggtc acatggtccg
     5641 ctttagtggc agcaaacaat agcttatcga taaccggcga aaacaaacgc cggaacaagg
     5701 tacgctgccc gtagtggaaa ctttgcatca gctgcgtcag tgccagacgc atatcattaa
     5761 atgcctgtgg cccactgttg agaggttgca ggcaatcaac cagcacaatc tggcggtcaa
     5821 agcgcagaaa atgattctta tagaacccct tcaccacctt ctcgcagtaa taattaaacc
     5881 gctcgcgcag cattccggca ttggtgtgct tatcggcctg cgccagtttg gactcgcccc
     5941 aggtatcgac atccggccac gggaagaatt gcagcgcggg cgcacctgcc atatctcctg
     6001 gcaagacaaa gcgccctggc tgaataaagt gcagcccctg ctgtttacag tggtggagat
     6061 aatcggtcca cgcggcggca atgtctgcca gccggttttc gtcggcaggt gctagcgggt
     6121 ccagcccttc gcacatcatt cgccatttga ccgaccattc gccgcgctga ccattgagta
     6181 agcccgtcat ctggcgtgac cagcttaaat agtcctgcgc cagcatcggc aggtcgagca
     6241 accattcgcc gggataatcc acaatctcca gatacagcgt ggaggtgtcc ttgaagtggc
     6301 gtagcagcga atcgttcgat ttaaaacgta gcgccaggcg gatttcactg acgccgcgcg
     6361 ttggcgtcgg ccaggcggga ggatcgccat ataactgcgc cagtccttca tcatatgtga
     6421 agcgcggaat gccaaagtca cgctgaggaa tgcgttttac gcccagcagg cgctcttcac
     6481 gcaccgcgct taacagcggc aagcgtgctc cggcgtgaat attgagcaac tgattgacca
     6541 tagcagtgat aaacgctgtt ttgccgctgc ggcttagtcc ggttacggcg aggcgcagat
     6601 gtctgtcgac accccgattc accagcgcat taagttcatt tttaagtcgc ttcattgctg
     6661 tcctgtgctg ctctgaagac cagaaaaaaa tcattcgtaa ggatatgaat gtgggggcca
     6721 ggccattgat tatcaactgc ccgtgttgtc atcgacgggc gaactccata agatgtgcag
     6781 cattcacgtt cggacgga
//
LOCUS       DADMIB010000201         6775 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.203, whole genome shotgun sequence.
ACCESSION   DADMIB010000201 DADMIB010000000
VERSION     DADMIB010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6775
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.203"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..503)
                     /locus_tag="JNZ89_003913"
     CDS             complement(<1..503)
                     /locus_tag="JNZ89_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8937620.1"
                     /translation="MKRLQAFKFQLRPNGQQEREMRRFAGACRFVFNRALALQNENHE
                     AGNKYISYAKMTSWLVEWKNATETQWLKDSPSQPLQQSLKDLERAYKNFFQKRTSFPR
                     FKKRGQNDAFRYPQGVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWY
                     ISIQTES"
     gene            511..942
                     /gene="tnpA"
                     /locus_tag="JNZ89_003914"
     CDS             511..942
                     /gene="tnpA"
                     /locus_tag="JNZ89_003914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HAY8937621.1"
                     /translation="MILWSMKKETDIRRGRHCVFLMHVHLVFVAKYRRQIFDHDAIEK
                     LRTYFSSVCADFEAELVEMDGERDHVHLLINYPPKLAISSLVNSLKGVSSRLLRRDRP
                     DIAARYYYKGVLWSPSYFASSCGGAPISIIRQYIEQQQTPG"
     gene            1003..1290
                     /locus_tag="JNZ89_003915"
                     /pseudo
     CDS             1003..1290
                     /locus_tag="JNZ89_003915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000020024.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1444..1902)
                     /locus_tag="JNZ89_003916"
     CDS             complement(1444..1902)
                     /locus_tag="JNZ89_003916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000243176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937622.1"
                     /translation="MVLKKIILIVIALLAISGIYRTTTAVIEHIRYVRSLEDSKSQLE
                     STNNTLSTALQLSENARSAMLTENERIKALEKEYQRKTAELNANLIKQREESQNEITR
                     LENALRRAGINDVRVPDDVIRMQRERAKAINQRASENYRRSHQQAAGKSD"
     gene            complement(1973..2776)
                     /locus_tag="JNZ89_003917"
     CDS             complement(1973..2776)
                     /locus_tag="JNZ89_003917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001350910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937623.1"
                     /translation="MLDSIGEVKAFKILSDAGISTPESITISRAASVKASSLASAIQG
                     IVHADKTYPDSVSAWTTQLLGFSEQLNEASKASSLLADSLSPYTKPSELLQMKIGWEC
                     YVKGNELTPIPAFALVEGMGNVSIPQSLTDALTALKLDALKTAMNAINAKIEAAGSAG
                     GSSNGGQGGAGGAQAPVITQDEIDALREAVTAAEVLLSEINSASESVVALTGRIKTST
                     TQATKGLENAVAITLTGSLLDDAVMSPAISLIMPQGVIDALQKNTKKEQ"
     gene            complement(2776..3060)
                     /locus_tag="JNZ89_003918"
     CDS             complement(2776..3060)
                     /locus_tag="JNZ89_003918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001272820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HAY8937624.1"
                     /translation="MSAIATSDTLCSGHGGFPPRLVAETVPWFTVNGKPVVVDGAMFP
                     SHTDGNSAHPGAAVSTRVWFSIGGKGVVCVGDPLSCGSVIANGEDIFQVA"
     gene            3328..4284
                     /locus_tag="JNZ89_003919"
     CDS             3328..4284
                     /locus_tag="JNZ89_003919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase"
                     /protein_id="HAY8937625.1"
                     /translation="MRIFIDDGSTNIKMLWEHDGETRTHISPNSFKRGWSATFGAGKP
                     FNYVIDDEKYSYDLISPDVLPTNNVEWQYSPLNVLAVHHALLTSGIEPQEVEIVVTLP
                     LAEFYDDDAQYNLDNIERKKASLMRPVTLNKGNVFTIKKVTVRPESIPAGIGLCDNLN
                     PAHSVLIVDLGGTTLDVSMVAGQMTAVSRVFGDSNLGVSLVTREVRQALARANTETSN
                     YNVDQLIINRHDEDYLNDNINDPSAIDDVKKAIAASIDRLCTRVLDVIGDFKGYTHVM
                     VIGGGAPLVADAIREQVNIRDDRFFVADDPQLALVHGLKAIG"
     gene            4298..4636
                     /locus_tag="JNZ89_003920"
     CDS             4298..4636
                     /locus_tag="JNZ89_003920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000076908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid stabilization protein"
                     /protein_id="HAY8937626.1"
                     /translation="MSQERKKVMIYLRPEAYANEKAASEKIKKHSDMARTALLAGLAL
                     GEVDSRLPGLLASLLTEDNNPELIRKMLASFLELPAAAEERPASIEPAKEQVVAKSAS
                     ARNLADSLPD"
     gene            4924..5565
                     /locus_tag="JNZ89_003921"
     CDS             4924..5565
                     /locus_tag="JNZ89_003921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000585023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY8937627.1"
                     /translation="MIILVASQKGGCGKSTTSVNICAELARANKDVVLLDADKQGTSA
                     RWASDRNAAEVSPVIHCVQKFGNIRETLLDLDKRYEFVVVDTAGRDSKEMRTGITAAD
                     VLLVPFRPSQPDLDTLAHFVEVFEEALDLMPNPSIKACAVLTMAPSNPVVNEANEAKE
                     YLAEYPQLKLLKTIIRDRKVYRDCMAEGKGVVEMDNGKAKGEIQMLVKELLSD"
     gene            5558..5845
                     /locus_tag="JNZ89_003922"
     CDS             5558..5845
                     /locus_tag="JNZ89_003922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000595051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937628.1"
                     /translation="MIKPRKSVKAPEVKDLDLERRIEAFASKADLVPGEQPEDNKVLD
                     KDAPRDFKSIRVGFNEYEYQVLDALSKKHNRSKLNMIRHAILMLAESEEAK"
     gene            6114..>6775
                     /locus_tag="JNZ89_003923"
     CDS             6114..>6775
                     /locus_tag="JNZ89_003923"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="catalyzes a two-step reaction, first charging a
                     glutamine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HAY8937629.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD
                     YFDQLHTYAVELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
                     MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
                     SDA"
BASE COUNT         1733 a         1543 c         1631 g         1868 t
ORIGIN      
        1 tcactttctg tctgaatact gatgtaccac ttaccgcagg actggctgac agtgacattt
       61 ttcacaacac ccgtgacctg acggctgttc cggtagcgca tccagccaag tttcggcaga
      121 aaaatacggc tgttttcctg atcgagctta acgccctgcg gatagcggaa tgcatcattc
      181 tgtccccgct ttttgaagcg gggaaaagag gtacgcttct gaaagaaatt tttgtaggct
      241 cgctcaaggt ctttcagtga ctgctgcaat ggctgtgagg gagaatcttt aagccattgc
      301 gtttcagtgg catttttcca ttcaaccagc caggaagtca tctttgcata agaaatatat
      361 ttgttcccgg cctcatgatt ctcattctga agcgccagag cacgattgaa aacgaaacga
      421 catgcgcccg cgaagcgcct catttcacgc tcctgctgtc catttggtct taactggaat
      481 ttgaaagctt gtagtcgttt cataagccaa attatacttt ggtccatgaa aaaagaaact
      541 gatatccgac gtggaaggca ctgcgtcttc ctgatgcacg ttcacctggt ctttgtcgca
      601 aaataccgac gtcagatttt tgaccatgac gcaatagaaa aactacgcac ttacttttca
      661 agtgtatgtg ctgattttga agctgaactg gttgaaatgg atggagaacg agatcacgtt
      721 cacctgctaa ttaactatcc cccaaaattg gcgatatcca gcctggtgaa cagtctcaag
      781 ggcgtatcaa gtagattatt gcgacgagat cgaccagata ttgcagcccg atattactac
      841 aaaggcgttt tatggagtcc cagctatttt gccagtagct gcggtggtgc accaatatcc
      901 atcatccgcc aatacattga acaacagcaa acacctggtt aggtggaaaa ccgcgcctta
      961 tatccccgac ctgaaggacg gggatataag gcgcaccggg gtaaggcagg tattcttcac
     1021 tgtatcggag atccggacga ttttgttgtt atgctggcgg atcgtgactc ttttctactg
     1081 tcctggaaag ctggtgcgcg cgaagcacgt ttggggaatg gtattggtta catagactat
     1141 agcgattgtc cgctggcatt tgctggtgga tatatgcatt ggcatgagcg aaataagggc
     1201 cgtcagcgtc agtatcgctt gagtgacttt aacgtctgtc acggtttcga agaagctgac
     1261 agccaggaca tctggcttca ggagccttga tcccccttcc cttcccaaat ctccctgttt
     1321 ttttggttat tcagtgcgtt tcgttggttg cattcgtcga tcgtgctgaa taactgttca
     1381 gcgtatgtcg gatacttgtt taacagcact ggcgtgtctt ctggcactaa acaaggggag
     1441 tagtcaatca gatttgcctg cggcctgctg gtggcttcta cggtaatttt cactggcacg
     1501 ctggttgatg gcttttgccc gttcccgctg catcctgata acgtcatcag gcacacgtac
     1561 atcgttaatc ccagcacggc gtaacgcatt ttcaagacga gtgatttcat tctggctttc
     1621 ctcccgttgt ttgattaggt tggcattcag ttctgctgtt ttgcgttggt actccttttc
     1681 cagtgcttta attctttcgt tttcggtcag catggctgag cgagcgttct cacttaactg
     1741 taatgctgta gaaagcgtgt tgttcgtgct ttccagttgt gattttgagt cttcaagcga
     1801 tcggacatac ctgatgtgtt cgataactgc cgtcgttgtt cggtaaattc cagaaatggc
     1861 taaaagagca attacaatca aaattatctt tttcaaaacc atcctcttca ggtttactat
     1921 tggtgttaaa catgtaccaa tttatatcct tttgtgttcc taagtggtgt tgctattgtt
     1981 cctttttggt gttcttttgg agcgcatcga taacgccttg tggcatgatt aaactgattg
     2041 ccggactcat tactgcatca tccagtagag aaccagttaa cgtgatggcg acagcgttct
     2101 ctaaaccttt ggttgcctga gtggttgacg ttttaatgcg acctgtaagg gctacgacac
     2161 tctcacttgc tgagttaatt tcggagagta aaacttcggc ggctgtcact gcttcccgta
     2221 aagcatcaat ttcatcctga gtaatgactg gagcctgagc gcccccagca ccaccctgtc
     2281 caccattgct agaaccacca gcacttccag cagcttctat ttttgcgtta atggcgttca
     2341 tggcggtttt cagagcatca agttttagcg ccgtcaatgc gtccgttaga gattgcggaa
     2401 tggaaacatt ccccatcccc tcaacaaggg cgaaagcagg tatgggggtc agctcgttac
     2461 cttttacgta gcattcccag ccaatcttca tctgtaacag ctctgatggc ttggtgtatg
     2521 gggaaagaga atcagccagt aatgaagacg ctttgctggc ctcattgagc tgttcagaaa
     2581 agccaagcaa ttgagtagtc caggccgaaa cagaatcagg ataggtttta tcggcgtgaa
     2641 ctattccctg tatggcgctg gcgagtgatg aggcttttac agacgctgcc cggcttatgg
     2701 ttatagattc tggtgtagag ataccggcat ctgacagaat tttgaaggct ttaacttcac
     2761 ctattgaatc aagcattatg caacctgaaa aatatcctcg ccgttggcga taacagaacc
     2821 acaagaaagc ggatcgccta cacagacaac tccctttcca cctatcgaaa accatactcg
     2881 cgtcgataca gctgcccctg gatgtgcact gttaccgtca gtgtgactgg gaaacatggc
     2941 accatctaca acaactggct taccgttaac ggtgaaccag ggaacagttt cagctaccag
     3001 tcgcggcgga aatcctccgt gaccagaaca aagggtgtcg ctggtggcta ttgcgctcat
     3061 tcttcacctc cgggttatcc tcctattgtc atcactttgt tatttcgtca ttcaaactga
     3121 gagttaaatt tcggaatatt tctgtattct cacttcattc tcaaataaat ctcactgtca
     3181 gaccataatt tattgggtga ttaaggtatt ctcaaaatga actcaataat cactcttttt
     3241 ttatctcttt tggtgtggat ttttgggtgc ttctctttta aaattgcatt ttgattctca
     3301 aatgtgtctc agaagtggag caagaagatg cgcattttta tcgatgatgg ttcaaccaat
     3361 atcaaaatgc tgtgggagca cgacggggaa actcgcactc acatcagccc taacagcttt
     3421 aagcgcggat ggtcagcaac atttggtgcg ggcaagccgt ttaactatgt cattgacgac
     3481 gaaaagtatt cgtatgattt gatctcgcca gatgttctgc cgacgaataa cgtggaatgg
     3541 caatacagcc cgcttaacgt cctggctgtt caccatgccc tgctgacaag tggcattgag
     3601 ccgcaggaag tagaaattgt ggtcacgctg cctctggcgg agttttacga cgacgacgcg
     3661 caatacaatc tcgataacat cgagcgcaag aaagccagtc ttatgcgccc cgtcacgctg
     3721 aataaaggca atgtgttcac gattaagaaa gttacggtac gaccggagtc tattccggca
     3781 ggaattggcc tgtgcgacaa tctgaaccct gcccattctg ttcttatcgt cgatttgggt
     3841 ggaactaccc ttgatgtttc aatggtcgcc gggcaaatga cggcagtttc ccgtgttttt
     3901 ggcgattcga atcttggtgt atcactggtc accagggaag taaggcaagc acttgcaagg
     3961 gccaataccg aaacgtcaaa ttacaatgtc gatcagctca ttattaaccg ccacgatgaa
     4021 gattatctga acgacaatat caatgaccca tcagcgattg atgatgtgaa aaaggccatt
     4081 gccgcaagca ttgaccgttt gtgtacccgc gttcttgatg tgattggcga ctttaaagga
     4141 tatacgcatg tcatggtgat cggtggtggc gcaccgctgg tggcagatgc aattcgcgag
     4201 caagttaata ttcgtgatga ccgtttcttc gtggcggatg acccgcaact tgctcttgtt
     4261 catggcctga aagcaatcgg ttaacgaggt aatgtccatg tctcaggaac gtaagaaagt
     4321 gatgatttat cttcgcccag aggcttatgc caatgaaaag gcggcgagcg agaagataaa
     4381 aaaacatagc gatatggcaa gaaccgcatt gttggcaggg cttgcgctgg gagaagtcga
     4441 tagcaggctt ccaggattac tggcttccct gctgaccgaa gataataatc cggagctgat
     4501 ccgaaaaatg ctggcatcct tcctggaact accagctgcg gctgaggagc gccctgcctc
     4561 cattgagcca gcgaaggagc aagttgttgc caaaagcgcg tcggcgcgca atctggctga
     4621 ctctctacct gattgacaga agatgtgctg gtttaaggct gcaaattgca gcctttttta
     4681 tgccttaatg gtgcctaatt ggtgttaatc tggcaccagt taggtgctgt tatggtgcag
     4741 ttttgtatct ggttccaatt tggggctgat ttcgtgttaa acaggatgca atataaggtg
     4801 tatttggtct gattgatgtt atactttgcc aaacattcat gactccatta tagagcctgt
     4861 cccgcatcaa aaaggctctt atctggaacc gttttgatac caaaatcaca ccgaggaacg
     4921 gatatgatta tattggtagc cagccaaaaa ggtggctgtg gcaaatcaac caccagcgta
     4981 aatatttgtg cggagcttgc ccgcgcaaat aaggacgtag ttctacttga tgcagataag
     5041 caaggaacat ctgcccgttg ggcatcggac cgtaatgcgg cagaggtttc tccagtaatt
     5101 cattgcgtcc agaagtttgg gaatattcgt gaaacacttc ttgatctgga caagcgttat
     5161 gaatttgtgg ttgttgatac cgctggtcgt gatagcaaag aaatgcgcac cggtattact
     5221 gcggcggatg ttttgcttgt tccattcagg ccatctcagc cagatttaga cactctggcg
     5281 cattttgttg aagtctttga agaggctttg gatctgatgc ctaatcctag cattaaggcg
     5341 tgcgcagtct taacaatggc cccatccaat ccggttgtga atgaagccaa tgaggccaaa
     5401 gagtacctgg ctgaatatcc gcaactgaag ttgctgaaaa ccatcattcg cgatcgcaag
     5461 gtttaccgcg attgtatggc tgaagggaag ggcgttgttg agatggacaa cgggaaagct
     5521 aaaggtgaaa tccagatgtt ggttaaggag ttattaagtg attaagcctc gtaaatcggt
     5581 aaaagccccc gaagtaaaag acctcgatct tgaacgccga attgaggctt ttgccagcaa
     5641 agctgatttg gtgccgggtg agcaaccaga agacaacaaa gtgctcgata aggacgcccc
     5701 acgtgatttt aaatccattc gtgttggctt caatgaatac gagtaccagg tacttgatgc
     5761 gttaagcaaa aagcataatc gcagcaaatt gaatatgatc cgccatgcta tcctcatgtt
     5821 agcggagtct gaggaagcaa aataaagtct ttcagggtgg ttttagaact taaaaaatct
     5881 tgaaccaaag atgcaccaat acactactaa tttggtgcac ctttacatcc tttttggttc
     5941 caattgtgta ccatttgtca ttaatttact tatgcgcaaa agtgggcttc atgaaaaagc
     6001 tcattattga aataacgata gaaagcaatt tctaatcaac tagtggttgt cagcctattc
     6061 ggcttataag atcatacgct gttatacgtt ttttacgctt tgaggaatcc acaatgagtg
     6121 aggcagaagc ccgcccgact aactttatcc gtcagatcat cgatgaagat ctggcaagtg
     6181 gtaagcacac cacagtacat acccgtttcc cgccggaacc gaatggctat ctgcatattg
     6241 gtcatgcgaa atctatctgc ctgaacttcg ggatcgccca ggactataaa ggccagtgca
     6301 acctgcgttt cgacgacact aacccggtaa aagaagatat cgagtacgtc gagtcgatta
     6361 aaaacgacgt tgaatggtta ggttttcact ggtctggtaa cgtccgttac tcctccgatt
     6421 attttgatca gctccacacc tatgctgttg aactgatcaa caaaggcctg gcgtatgttg
     6481 acgaactgac gccggaacag atccgcgaat accgcggcac cctgacgcag ccgggtaaaa
     6541 acagcccgta ccgcgatcgc agcgttgaag agaacctggc gctgttcgaa aaaatgcgtg
     6601 ccggtggttt tgaagaaggt aaagcctgcc tgcgtgcgaa aatcgacatg gcgtcgccgt
     6661 ttatcgtgat gcgcgatccg gtgctgtacc gcattaagtt tgctgaacac caccagactg
     6721 gcaacaagtg gtgcatctac ccgatgtacg acttcaccca ctgcatcagc gatgc
//
LOCUS       DADMIB010000202         6759 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.204, whole genome shotgun sequence.
ACCESSION   DADMIB010000202 DADMIB010000000
VERSION     DADMIB010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6759
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.204"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..297
                     /locus_tag="JNZ89_003924"
     CDS             <1..297
                     /locus_tag="JNZ89_003924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8937630.1"
                     /translation="LPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVT
                     FANVFTIIPPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD"
     gene            complement(448..3771)
                     /gene="mscM"
                     /locus_tag="JNZ89_003925"
     CDS             complement(448..3771)
                     /gene="mscM"
                     /locus_tag="JNZ89_003925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HAY8937631.1"
                     /translation="MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPE
                     VVEALQSALNALEERKGSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMS
                     TDALNQEILQVSSQLLDKSRQAQQEQERTREIADSLNQLPQQQTDARRQLNEIERRLG
                     TLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQL
                     DAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQA
                     QRMDLVASQQRQAASQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNS
                     LLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDL
                     RRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVG
                     KVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLL
                     WVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDRE
                     FSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVA
                     ILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNG
                     KQTGRTLTSAGKGRQAGSL"
     gene            complement(3793..4761)
                     /gene="psd"
                     /locus_tag="JNZ89_003926"
     CDS             complement(3793..4761)
                     /gene="psd"
                     /locus_tag="JNZ89_003926"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313166.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HAY8937632.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEED
                     KILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSV
                     TKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV"
     gene            complement(4858..5910)
                     /gene="rsgA"
                     /locus_tag="JNZ89_003927"
     CDS             complement(4858..5910)
                     /gene="rsgA"
                     /locus_tag="JNZ89_003927"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HAY8937633.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV
                     ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
                     KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV
                     GKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            6005..6550
                     /gene="orn"
                     /locus_tag="JNZ89_003928"
     CDS             6005..6550
                     /gene="orn"
                     /locus_tag="JNZ89_003928"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HAY8937634.1"
                     /translation="MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGP
                     TIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDSFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
BASE COUNT         1564 a         1816 c         1813 g         1566 t
ORIGIN      
        1 cttccttacc tgttcctcgc gctggctttc ccattcttta aagcacgtca ggatctcgac
       61 agaccatttg tgattttcaa aacgcgtatg tcggcaatga ttgcgacggt ggttgtcgta
      121 ctggtggtga catttgcgaa cgtcttcacc attattccgc ctgtggttga agccggagac
      181 tgggacagca cattgtggat gattggcggc cctgtcttct tctcgctgtt agcgatggcg
      241 atttaccaga actattgcag tcgcatggcg aataaacctg agttagctct cgactgatca
      301 tatgaaatcc tgcaactcat cgtctctccg gcgatgagtt gtcaggaagt aatgcgtatg
      361 gatgatactc tccagggccg gtgataactg aagatgatgt taagctgcta aatgagccac
      421 gttgacatca tttggcagct tcatgcatta caaacttccc gcctgacgac ctttgcccgc
      481 agacgtcagc gttctccccg tttgtttacc gttgaggctt tccagacgca tctggaaggg
      541 cgggaatggc atatcgatac cgtgggcatg gaagccagcc agaatcagct ggtggatctc
      601 atggcgtagc ggcatacggt gacccatctc agcggcataa atacgcagct cgaaaatctg
      661 aatcccttgt tgcagatcca ccaggaagac ttccggtgcc gggttgtcga tcaccagcga
      721 gcagcgacgc gctgcggtga gcaggatttc cgtcacttct tcactgttgg catcagcagg
      781 ggccggaatc gtcaacacta cgcgcgtaac cgagtcagag agcgaccagt tgataaactg
      841 ctcggtaata aacgccttgt tcggcacgat tatctcttta cggtcccagt cgctgatggt
      901 ggtggcgcgg gtgttaattt tcgtcacgct accggtgaga tcgcgaattg tcaccgtatc
      961 gccaatgcga atcggttttt cgaacaggat aatcagacca gagataaagt tggcgaaaat
     1021 ttcctgcaaa ccaaaaccga gaccaacacc gagcgcggcg accagccact gcaatttcga
     1081 ccattcaata ccaatcatcg agaagccgac cagcccgcca atcagcatca gcagatattt
     1141 ggtgatggtg gtgatggcgt agcctgtacc cggcgttaaa tccaggtgct gcaaaatcgc
     1201 cagttccagc agcgcgggca ggttgcgcac cagctgcgtg gtgatgataa acaccagaat
     1261 ggcaatcagc accgcaccga gggtaattgg ctccagactt tctacgcctt gtaccgtgga
     1321 ggtgacatcc cacagcgaaa tattttcgag gaagccgaaa gcggaatgga tttctgacca
     1381 cagcacaatg acagaaagca gggcgatcaa catcaaaatt gagcgcacca gccgcaagga
     1441 ttgcgcactg atggcatcga gatcgacttc gctttcatcg acttcaattg ctccttccgg
     1501 gctactgtga tgatgcgctt cctcttcgcc acgcgcacgt tgcgctaaca tctctgcccg
     1561 gcgatgcttc gcccggtcaa acgccagcct gcggcgctgg atcagcatcc agcggcggat
     1621 aacgtgataa accaccagta gcaggaacca gatggcaacc gaggtttcaa gcctcgctaa
     1681 cagcgcctgt gccgttgcca gataacccac agccgacgcc agaatggcaa ccaacggcgc
     1741 gccaatcatc atgttccaca gcatatggtt ggtaatgttg tcgccgctgc cctctttgtt
     1801 gagatacagt gggatcccgg cctttttcag gctgagggtg accaccgcca gcgcaccgca
     1861 aatgaggata aagcaaagcc gtcccagcga accggagaat tcacggtcgt cgaggttatc
     1921 gaacatcatc agcgccataa tcagcggcac aataagcccg atgctcatca ggtagtagcg
     1981 catcccacgg gaaacacgtt cgcgcggcca gccaaaatga gcgataaaca agccgttcgg
     2041 gcgggcaaag gtggcgcaaa tcatcactac ccacagcagc ggcacggtag ccgttacacc
     2101 atcgccaatc gcgaccgcca gcggataagg ccacgcctcg cgcaagccgt aacccagcgt
     2161 catccacagc accggtaacg gtgacgcgac gagaatcgac cagaaaagag tgcgcaacgt
     2221 cagccagaag tgatcctgag tcactttgcc aactttcgcc gccgaacgtt caagaaaacg
     2281 ggtgaaatag cggcgcgagt aaatactgca accgaccaga atcaacgcgc caaacagcgg
     2341 caaaattgtc tctttgctgg tcagcatcat cacactggct ttgcccaact gactgaaggt
     2401 gtccagcgaa atgagacgac gcagatcctg ggcgatttcc agcggccagg cgatggtcat
     2461 cgggcgcacg tcagaggtcc agaacagata gcggtgcgtt gcttcgttca cctctttcag
     2521 cgcatcctcc agttgcccgt tggagacttt cagcttggtc agttccaata gtagcgtgtc
     2581 gccaccctgc aacaatgagt tcagcaactc acgctgagtg cgcagttgtg cttccagaat
     2641 acggttttgc tcggcggtca gcggctgacc gtcggcctga tggatttgcc gtagcagcgg
     2701 ctgtttatta agcagatcct cataacgtaa ccgttgcaca cgcaactgcg ccatttcggt
     2761 atcaagctgt tgtggttttg gcatttctgg cagccgtgcc acctgcgccc gcagcgcttc
     2821 gccgagcaga ttggacgatc ccagccattg cgactgttca cgcagcgtat tcaacgcctg
     2881 ccggacctgt aacgtctggc tggcagcctg acgctgttgc gaggcaacga gatccatccg
     2941 ctgcgcctgt tgattcaaag ccgccgatag ttcgcggtta attttgaatt gcgcgacgat
     3001 atctttcggc aaatcggcgc tgttttctgc cagcaattcg gtactttcca gcgcccgctc
     3061 cgcctcaagc tgacgttggc tgtttaattg attacgcaag gcctgcaaat acgcatccag
     3121 ttgctggctc tctttttccg ccagctctga gcgtaagcgc gctaattcct ggcggttatt
     3181 ggcagacagc tgcgccagct ccagttcatc aacgagcgcc ttaagacgtg cagagtcaga
     3241 ctgcaacgcg aaattttgtg cctgattgag cggagtattg ccggtaagcg ttcccaggcg
     3301 gcgctcgatc tcatttaact gacggcgggc gtcggtttgc tgttgcggca gttgattcag
     3361 cgaatcggca atctcgcggg tgcgctcctg ctcttgctgg gcctgacggc ttttatccag
     3421 caactggctg ctgacctgga gaatttcctg attcagcgcg tcggtagaca ttcccggcga
     3481 cacgctgcgc ggctcgtcac gcatgttgtt taattgtgcg cgcagagtag cggagagttt
     3541 cggataatta tcgataactt gctgatattg tttgatgcgc tcaagggaac cttttcgttc
     3601 ctcaagcgca tttaaggcag actggagcgc ctctacgact tccggctgtg cgggtttcgc
     3661 cgcttttgcc tgctccagtt cctgagtgat ttgtttgcta tcgggggccg tcgcggcgta
     3721 cgccccccaa ctgaggcacc aggccatcag aaaagtgata atcaggcgca cgtcagcgtt
     3781 tcctttgatg gattagacct ggtctttttt atcgtcaacc aatgggctgg cgtcgtgttc
     3841 tgcttcgatc tcttcagcag gaagtggggc gggttcagcg tctggcgtaa caaaggtttc
     3901 ggtagatact gccagcggct ggccaatttt cgtgacagac aggctttcca gttgctcaac
     3961 cagattcact ttacccggtg caaacaggtt gataacggtg gaaccgagtt taaagcgacc
     4021 catttcctgg cctttcagca gtgccacaga accgtcgttt tccccggcag gccaggtcca
     4081 gcgcttgatg ataccttcgc gcggcggcgt aatggtgccc gcccagaccg tctcaatgct
     4141 gccaacaatc gtcgctccga ccagaatctg cgccattggg ccaaattcgg tatcgaaaag
     4201 gcaaatcacg cgttcgttac gggcaaacag attcggcacg ttctgagcgg tgagatggtt
     4261 aacggagaag agatcgcccg gcacgtagat catctcacgc agaataccgt tgcacggcat
     4321 gtgtacgcga tggtagtcac gcggggagag gtaagtggtc acaaacgtac cgttgcggaa
     4381 caggtccgcc atcagatagt tgcctgccag cagggcttcg aggctgtagt tgtggccttt
     4441 ggcttgcagg attttatctt cttcgatttt acccaactgg ctgataacgc catcggcagg
     4501 catgaccagt acattcggat cggtatcgat tgggcgtact tcgtcacgca gcggacggac
     4561 aaagaattcg ttaaaggtgc ggtagctggc ggtgtccggc ttttgcgcct ctttcatgtc
     4621 gaccttgtag tatttaacga acagatcgat aaccagtttt gtcagccatc ctgcccgctt
     4681 gcttgcgccc caacccgcca ggcgagtaag ccatagtttc ggcagaatgt actgtagcga
     4741 aagtttaaat gaatttaaca aggtagcctc caggccattg ttttgtcgtt cctgatccgg
     4801 ccaacatgcc ggatcctgaa aaaaagggga cgattctaac gacggttagc ttaattgtca
     4861 gtcatccgta tcagaaaagt ttttacgcgt ttttacctgc gccatgcttt ccagaatacg
     4921 gtgatagttt tcgaaacggg tttccgcgat tttcccttcc tcaaccgctt cccggatagc
     4981 gcagcccgga tcggtatcgt gtttgcaatc gcgatattta cacagaccta aatagtcatg
     5041 gaattcgaca aagccctgag tgatttgttc cggctccagg tgccagaggc cgaactcacg
     5101 cacaccaggg gaatcaatca catcaccgcc gtgcgggaag tgatacagcc gagcggcggt
     5161 cgtggtgtgc tgaccgagcc ccgagttgtc agagacatcg ttggtcagga tctctttttg
     5221 cagccccagc aacgcattca gcaggctgga tttaccgacg ccagactgcc cggcaaaaat
     5281 gctgatgcgc ccggtcaacg cctcttccag cggttttagc ccatcctgag tatggctgga
     5341 aaccatcaat acgcgataac cgatattgcg gtagatatcc atctgctcgt tgacgaacgc
     5401 catgccttcg tcgtccagca ggtctatctt gttgagcaca ataatcggct caatctgcaa
     5461 ggtttcgcag gccaccaggt aacggtcgat aatattgagt gacagctccg gcaaaatggc
     5521 ggagacaatg acaatctggt cgatgttggc ggcaataggt tttacgccgt cgtagaaatc
     5581 aggacgcgtc aacaccgagg tacgctcatg caccgcttcc acgatccctt tgacatttac
     5641 gccttccgcc gccggtttac ccggacgcca gactacacgg tcgccggtca ccagcgaacg
     5701 gatggtacgg cgaatattgc agcggtgaac gtcgccatcg gcggattcca catcagcgtg
     5761 cataccaaag cggctgatga cgataccttc atcaggctcg ccaaacagat tgtcgtcgta
     5821 gtcgggcttc tccttagacg ttttaagacg acgctggtga ttggcgttca cgcggcgctg
     5881 ctggcctttg gagagtttat ttttactcaa tcgtacagac tcctggtcgc ccctgatggg
     5941 caaaacatct atgatacacg caattgtgga tcaatatagt cactgtgaat gggtggaaaa
     6001 tagcatgagt gccaatgaaa acaacctgat ttggatcgat cttgagatga ctggtctgga
     6061 tcccgagcgc gatcgcatta ttgagattgc cacgctggtg accgatgcca acctgaatat
     6121 tctggcagaa gggccgacca ttgcagtaca tcagtccgat gaacagctgg cgctgatgga
     6181 tgactggaac gtgcgcaccc ataccgccag cgggctggta gagcgcgtga aagcgagcac
     6241 gatgggcgat cgggaagctg aactggcaac gctcgaattc ttaaaacagt gggtgcctgc
     6301 gggaaaatcg ccgatttgcg gtaacagcat cggacaggac cgtcgtttcc tgtttaaata
     6361 catgccggag ctggaagcct acttccacta ccgttatctc gatgtcagca ccctgaaaga
     6421 gctggcgcgc cgctggaagc cggaaattct ggatagtttt accaagcagg ggacgcatca
     6481 ggcgatggat gatatccgtg aatcggtggc ggagctggct tactaccgcg agcattttat
     6541 caagctgtaa aatttttcct ggtcacgtaa gcgccggaat ccacttgcgg cggcgtgatt
     6601 ttgacgctaa attgaacgtc ttgctgataa tttcagcact tgagataaaa acgcaaaaaa
     6661 aacttttttg gggggttgca gagggaaaga tttctcgtat aatgcgcctc ccgtaacgac
     6721 gcagaaatgc gaaaattacg aaagcaaaat taagtagta
//
LOCUS       DADMIB010000203         6565 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.205, whole genome shotgun sequence.
ACCESSION   DADMIB010000203 DADMIB010000000
VERSION     DADMIB010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6565
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.205"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..357
                     /locus_tag="JNZ89_003929"
     CDS             <1..357
                     /locus_tag="JNZ89_003929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417590.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937635.1"
                     /translation="AITALNFYQGDVPSVMIRIQPENMSPLIIDISTGEHDNYIIQTL
                     DVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTQKEAILTAPTHFNKTCITSDC
                     WQILFFSPDHFNNDFY"
     gene            379..1558
                     /locus_tag="JNZ89_003930"
                     /pseudo
     CDS             379..1558
                     /locus_tag="JNZ89_003930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417591.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YhaC family protein"
     gene            complement(1946..2322)
                     /gene="rnpB"
                     /locus_tag="JNZ89_003931"
     ncRNA           complement(1946..2322)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="JNZ89_003931"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(2355..3500)
                     /gene="garK"
                     /locus_tag="JNZ89_003932"
     CDS             complement(2355..3500)
                     /gene="garK"
                     /locus_tag="JNZ89_003932"
                     /EC_number="2.7.1.165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312029.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 2-kinase"
                     /protein_id="HAY8937636.1"
                     /translation="MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADG
                     GEGTVEAMIAATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAE
                     KRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNE
                     IGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAM
                     IVELDNNLSHYAEVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTVL
                     NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVH
                     QHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG"
     gene            complement(3597..4487)
                     /gene="garR"
                     /locus_tag="JNZ89_003933"
     CDS             complement(3597..4487)
                     /gene="garR"
                     /locus_tag="JNZ89_003933"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HAY8937637.1"
                     /translation="MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAA
                     GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLA
                     SREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV
                     HTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD
                     AKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGT
                     ADHSALACYYEKLAKVEVTR"
     gene            complement(4517..5287)
                     /gene="garL"
                     /locus_tag="JNZ89_003934"
     CDS             complement(4517..5287)
                     /gene="garL"
                     /locus_tag="JNZ89_003934"
                     /EC_number="4.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyglucarate aldolase"
                     /protein_id="HAY8937638.1"
                     /translation="MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWL
                     VLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVET
                     KEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN
                     VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP
                     VEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK"
     gene            complement(5303..6539)
                     /locus_tag="JNZ89_003935"
                     /pseudo
     CDS             complement(5303..6539)
                     /locus_tag="JNZ89_003935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005155249.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
BASE COUNT         1795 a         1705 c         1432 g         1633 t
ORIGIN      
        1 gcaattactg cattgaattt ctatcaaggc gatgttcctt ctgtcatgat ccgaatccaa
       61 ccggaaaata tgagtccatt aatcatagat atttctacag gagaacatga taattatatc
      121 atacaaacat tagatgtagg cacttttgca ccttttggtg aacaatgtac ttgctcagcc
      181 gtcaataaaa aagagctgga atgtattaag gagacgattt ctaagtattg cgcaaagttc
      241 acccaaaaag aagccatctt aacagcccct acgcacttta ataaaacctg cattacttca
      301 gattgttggc aaattctctt tttttcaccc gatcatttta ataatgattt ttattgatta
      361 tttataaagg ataaaataat gttccctgtt tcatcaattg gtaatgatat tagtagtgat
      421 ttagtccgtc gaaaaatgaa tgaccttcct gaaatcccca tagaaaataa tctcgaagca
      481 ctagcaccag gtatagaaaa actaaaacag acctctattc aaatggtcac tttacttaac
      541 gcgttacaac caggtggaaa atgtattatc actggtgatt ttcaaaaaga attagcgtac
      601 ttacaaaatg taattcttta taatgactcg tttcttcgtc tggatttttt aggttataac
      661 gcccaaatta ttcaacgatc ggacaatacc tgcgaactta ccattaatga accgttaaaa
      721 aaccaggaaa tatctacagg caatatcaat gttaattgtc cattaaaaga tatttacaat
      781 gaaatcagga ggttgaacac aacctttagt tgtgggactg gagatatagt tgatctatcc
      841 tctctggact tacgtaatgt cgatttagat tattatgatt tcacagataa acatatggct
      901 aatactattc taaatccttt taaattggat tcaacaaatt ttactaatgc caacatgttt
      961 caggttaatt ttgttagttc aacacaaaac gccacaatct cctgggatta tttactaaaa
     1021 ataacgcctg ttttaataag tattagcgat atgtattctg aagaaaaaat caagtttgtc
     1081 gaaagttgtt taaatgagct tggagacatt accgaagaac aattaaaaat tatgagattt
     1141 gcaattataa aatctatacc aagggcaact cttacagata aattagaaaa tgaattaaca
     1201 aaagaaatat ataaaagctc atcgaaaatc aacaattgct tgaacagaat taaattacca
     1261 gagatgaaag aattctcatc aaaaaaaaaa catatgatta catcgatata atcattgaag
     1321 attatgaaaa tatcaaagaa aatgcttatc tggtcgtccc ccaaattaat tatactatgg
     1381 atttaaacat agaagactcc agctcagaag agttaatacc ctcgagaaag acgaaaattc
     1441 ttcggacaat ggctttgaag tcgaagaata taacgcatat gaagcatata actcagagaa
     1501 tctatatttt accagagagg aatatacgta tgattacgac ctttcaaatg caatatagac
     1561 ttaataactt cttacaaaat ctataattaa taccgtagat attcattcat cttaccctgt
     1621 gcaccaaaag caaaaactca ctgacgcggg tttgaaactg atggcaaccg caaaaatgcc
     1681 tgatgcgcta cgcttatcag gcctacgcca tctctgcaat atattgaatt tgcgtgcttt
     1741 tgtaggcagg ataaggcgtt cacgccgcat ccggcatgaa taaagcgcac tcaacaatct
     1801 gaaacccgcc ggaacggttt attacgtaca tcaggtgaaa ctgaccgata agccgctttc
     1861 ttttgggtat agtgtcgtgg acagtcattc atctttctgc ccctccaaaa gcaaaaaccc
     1921 gccgaagcgg gtttttacgt aaatcaggtg aaactgaccg ataagccggg ttctgtcgtg
     1981 gacagtcatt catctaggcc agcaatcgct cactggctca agcagcctac ccgggttcag
     2041 tacgggccgt accttatgaa cccctatttg gccttgctcc gggtggagtt taccgtgcca
     2101 cggactgtta ccagccgcgc ggtgcgctct taccgcaccc tttcaccctt acctgatccc
     2161 gcttgcgcgg gccatcggcg gtttgctctc tgttgcactg gtcgtgggtt tcccccccag
     2221 gcgttacctg gcaccctgcc ctatggagcc cggactttcc tcccctccgc ccgtctcccc
     2281 cgaagaggac gacgacgaag cggcgactgt ctggtcagct tcggcgcgca gtatagaggg
     2341 tttgcgcgcc cttgtcaccc cgcgttgcgc attccaatcg ccagtgtcgc ggcgatatta
     2401 cgtgaagcac ggcagatatt gtcataagcc ccgcggaatg cttcgtccaa cgtacctatg
     2461 ctggtcaata cgctgaagac cgcatcaatg ccatgctgat gtacaacgcc aacatcatcg
     2521 gtcaggctac ccgcaatgcc aatcaccggt ttatggtact tcttcgccac gtttgcgaca
     2581 ccaatcggta ccttgccgtg aatactctgg ctgtcaatac gcccttcacc ggtgatcacc
     2641 agcgtacaat cgtgaatatg ttcttccaga ttcagcaccg tagtgacgat ttcaatacca
     2701 cttttcagtt ccgcaccaag aaacgccatc agcgccgcgc ccataccgcc cgcagctcct
     2761 gcgccgggga catctttcac atcaacatgc agcgcttttt taatgacctc ggcatagtga
     2821 gagaggttat tgtccagctc aacaatcatc gcttcactgg ctcccttttg tgggccaaag
     2881 atgcgcgatg cgccgttatc gcccaccagc ggattggtga catcacaagc gacgcgaatg
     2941 acgcaatctt ttaagcgcgg atcgaggccg gaaatatcaa tatcattcag agtattaaga
     3001 ctaccgccgc caaaaccaat ttcattgccg ttggcgtcgc ataatttcgc ccccagcgcc
     3061 tgtaccatgc ctgcgccgcc atcatttgta gcgctgccgc caatgccgat aataatgttt
     3121 gtcgcaccgc tctccagcgc ctgcaggatt aactcgcctg tgccgcgtga agtggtcacg
     3181 agtggatcgc gtttttccgc aggtaccagc tccagcccac tggccgccgc catttcaata
     3241 aacgcggttt tgccatcgcc ggagatcccc caactggcat tcactttctc gcccaacggc
     3301 cctgtaaccc aggcgtgacg ttcggaaccc tgggtggctg caatcatcgc ttccaccgtt
     3361 ccttcgccac cgtcggcaac cggaacagaa acgtactgtg catcaggaaa aatttcccga
     3421 aatccttttt ctatcgcctg cgcaacctcg ctggcagata aactttcttt ataagagtct
     3481 ggggcgatta cgattttcat acctatgcct gttaccacat gacgccggag ggcgtttctc
     3541 ttattcggcg tggattccag gcccggattg caatacgcca tccgggcacg acgtcattaa
     3601 cgagtaactt cgactttcgc cagtttttcg tagtagcacg ccagagcgct atgatccgcc
     3661 gttcctaaac catctgcacg cagtgcctgc atcatctcca taaccgcagc tgtgagcggc
     3721 agttgcgcgc cgacgccgtg agaagtatcc agcgcattcg ccagatcctt aatatgcaga
     3781 tcaatgcgga agcccggctt gaagttgcgg tccatcacca tcggcgcttt ggcatccagc
     3841 acggtactgc ccgccagccc accgcgaatt gcctgataaa ccaggtccgg gttaacgccc
     3901 gctttagttg ccagcgttaa cgcttctgac atcgcagcaa tattcagcgc cacaatgacc
     3961 tgatttgcca gtttggtgac gttacctgca ccgatttccc cggtatgcac cacggaaccc
     4021 gccatcgctt tcatcaaatc atagtatttg tcgaaaatag ccttgtcgcc gcccaccatc
     4081 actgacagcg taccgtcgat ggctttcggt tcaccgccgc tcaccggagc atccagcata
     4141 tcaatgcctt tcgctttcag cgcttcgctg atttcacggc ttgccagcgg tgcgatagaa
     4201 ctcatatcga tcaataccgt acctggcttc gcgccttcaa taatgccatt ctcacccagc
     4261 gccacctctt tcacatgagg ggagtttggc agcatggtta tgatgacgtc gcactgttca
     4321 gcgatcgctt tagccgtaga cgctgtttct gcacctgcag caatcacgtc agcaatagct
     4381 tctgggttac ggtcagcaac caccagcgag taacctgctt tcagaaggtt tttactcatt
     4441 ggtttaccca taatccccag gccaataaaa ccaactttca tagtcatatc aatcatctct
     4501 cttgttgcgg tggtggttat tttttaaagg tatcagccag tttctgagtg gcagagcgga
     4561 agacgccaag atcgctgccg acagccacaa acgtcgcgcc ccattccaga taacgacgcg
     4621 catcggcttc gaccggcgcg agaataccgc tgggtttgcc gtgcgcactg gcacggttaa
     4681 aaatatgctg aattgctttt tgtacatccg gatgcgaggc attgccgaga tggcccaatg
     4741 ccgcagccag atcgctgggg ccgacgaaga taccgtctac accttcggta gcggcaatag
     4801 catcgacgtt atctacgccc tgctgacttt ctatctggac cagaatagtg atgttcttgt
     4861 tcgactgagc gaaataatcc gccacggtgc caaacatatt ggcgcggtga gaaacggaga
     4921 cgccgcgaat gccttccggc gggtaacgag ttgatgccac cgcctgctct gcttcctctt
     4981 ttgtttctac aaaaggaatc aggaagttat agaaaccgat atccagaaga cgcttaataa
     5041 ttaccggctc gttggtcggc actcgcacta ctggcgcgct ggcgctgcct ttcagggcca
     5101 ttaactgcgg aataaacgtg gaaatatcgt ttggcgcatg ttcgccatcc agcaccagcc
     5161 agtcaaaccc agccaaacca agaacttcag tgctaatcgg gttagagagt gctgaccagc
     5221 aaccaatttg tacctgtttc gcagccagtg cggctttgaa tttattcggg aaaacatcgt
     5281 tattcatcgc ttataccttt gcttatttct gcaattccat acgtttaatg tcgccaacta
     5341 cgaagaggta gcagaccatc gccatcagcg ctgaacatcc cacgaaaacc agtgctgcat
     5401 tgaaggagtg cagttcactt accaggtagc caatcaccag tggagtgaca atggaggcaa
     5461 cattgccaaa gacgttaaag acgccgccac agaggccaac aatctctttc ggcgcggtgt
     5521 cagaaatcac cggccagccc agagcaccaa atcctttgcc aaaaaaagcc agcgccatca
     5581 gcatgaccac cagcgtggtg ttgttggtgt agttacataa gatgatggtg gaagccagca
     5641 acattcccag cacaatcggt agcttacgtg ccagggtcag ggataaaccg cgtttgatca
     5701 gataatccga gaagacacct cccagcacgc cgcccgcaaa accacacagt gccggaatcg
     5761 aggcgaccag acccactttc agaatcgaca tgcctttttc ctgcaccaga taaatcggga
     5821 accaggtgag gaagaaccag gtgatggtgt tgataaaata ttgtccgaaa aatacgccca
     5881 acatcatgcg gttagagagc aattgcttga tgtaatgcag tttgggaccg cttgctgccg
     5941 cgctgcccgg ctttttgtgg tccatatcga ccaccgcgcc attttcagag ataaacttca
     6001 gctcttccgc agacatacgt gggtgatctg tcgggttata aatcaacttg atccacagcg
     6061 ccgtcagcac aaaaccaatc acccccataa cggtgaagac gtgctcccag ccccaggcga
     6121 aagtcagcca gccaagcaga ggcgaaaaga gcgccagcga gaaatattgc gccgagttaa
     6181 agatggcgga ggcagtacca cgttctttcg tcgggaacca ggcggcgaca atacgggcgt
     6241 tcgccgggaa tgatggcgct tccgagaagc cgagcataaa gcgcataaag aacatagaga
     6301 tccctgccca ggccagcggg aacatatcaa caaagccttg caggaaggtg aatagcgacc
     6361 agaaaaagag gctgtaggtg taaacttttt tcgagccaaa cttatcaagc agccagccgc
     6421 cgggaatttg catcagcagg taggacttcg gtaccagcaa tagacagcgt tgcacaatcg
     6481 gcgtagttaa cggcggtaac aataaaaata atcagtaata ttaaatagcg ggtatgcacg
     6541 cctttctttt ttacgtcaac ggtgt
//
LOCUS       DADMIB010000204         6393 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.206, whole genome shotgun sequence.
ACCESSION   DADMIB010000204 DADMIB010000000
VERSION     DADMIB010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6393
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.206"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..208)
                     /locus_tag="JNZ89_003936"
     CDS             complement(<1..208)
                     /locus_tag="JNZ89_003936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311770.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="knotted carbamoyltransferase YgeW"
                     /protein_id="HAY8937639.1"
                     /translation="MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAAL
                     KALRAENISTKVFNSGLGISVFRDN"
     gene            687..2465
                     /locus_tag="JNZ89_003937"
     CDS             687..2465
                     /locus_tag="JNZ89_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HAY8937640.1"
                     /translation="MELATTQSVLMQIQPTIQRFARMLASVLQLEVEIVDENLCRVAG
                     TGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCDSKENCREKAFLGTP
                     VILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLLEDQGPGDNISK
                     IFATMIDNMDQGVLVVDDESRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFESNFTH
                     GHMQHIVSWDDKSELIIGQLHNIQGRQLFLMAFHQSHTSFSVANAPDEPHIEQLVGEC
                     RVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPE
                     QLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAR
                     EILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQED
                     IELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGE
                     VIDSTLLPPNLLNNGTTEQSDVTEVSEAHLSLDDAGGTALEEMEKQMIREALSRHNSK
                     KQVADELGIGIATLYRKIKKYELLNT"
     gene            complement(2505..2984)
                     /gene="xdhC"
                     /locus_tag="JNZ89_003938"
     CDS             complement(2505..2984)
                     /gene="xdhC"
                     /locus_tag="JNZ89_003938"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase iron sulfur-binding
                     subunit XdhC"
                     /protein_id="HAY8937641.1"
                     /translation="MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGC
                     CVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQ
                     CGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK"
     gene            complement(2981..3859)
                     /gene="xdhB"
                     /locus_tag="JNZ89_003939"
     CDS             complement(2981..3859)
                     /gene="xdhB"
                     /locus_tag="JNZ89_003939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase FAD-binding subunit XdhB"
                     /protein_id="HAY8937642.1"
                     /translation="MFDFASYHRAATLADAINLLANNPQAKLLAGGTDVLIQLHHHND
                     RYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAAMSIAG
                     LQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSL
                     EHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFG
                     VAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQTMT
                     KKVISEAVAAAGGKLQ"
     gene            complement(3870..6167)
                     /gene="xdhA"
                     /locus_tag="JNZ89_003940"
     CDS             complement(3870..6167)
                     /gene="xdhA"
                     /locus_tag="JNZ89_003940"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdenum-binding
                     subunit XdhA"
                     /protein_id="HAY8937643.1"
                     /translation="MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVR
                     SPIAHGYAVSINDEQARSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALL
                     TRHVRHHGDAIAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGN
                     LLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSST
                     QIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKV
                     SLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGN
                     KVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEI
                     RLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVA
                     CFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVS
                     DVRVISTQDTDVTPFDPGTFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNL
                     TLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVD
                     LTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGV
                     VRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMA
                     TGVAINTLPLTPKRLYEEFHLAGLI"
BASE COUNT         1595 a         1511 c         1616 g         1671 t
ORIGIN      
        1 agttgtcgcg gaatacggaa atacctaatc cactattaaa gactttggtt gagatgtttt
       61 cagcacgcag tgcttttaat gctgcggcaa cgtccagtac ttgtttcagt tcatctggcg
      121 tctgttccca cgttaacaaa aaatctttct cgtgaaggtg agaggtcagc gaattgatat
      181 ccttaatcag ctcattaaca gttttcatca taaagtcccg gtagtggaat gacaggcaaa
      241 gtggtttatt tcactgtgac ttgccaaagt gattggtgtt ttcacagcta tacctgggac
      301 taacaataag tgtgccagaa ttatccgcgc ggctgcaaaa gactaatttg acggataatg
      361 tgtggggttg atcacaaatt gatgccagct tctggttgtt tgtaaaatac gaaaacgttt
      421 ggcttttttt atcgcgttat ttatttgctg ctaagtatca gaaataagat aaaggggcag
      481 gctatctctc ttcagtttga taaactcacc gccgtaattc tcatattgat atagaaatgt
      541 gatatctctt ccataatttc attagaaaat gataaaaatc ttatgttttt atcaaagcca
      601 atttcgcctg agttaatatc atcatgatct gtgaaccatc aacgtcttca atgatcgact
      661 tttaagtaag tctggaaggt aaagctatgg agcttgctac tacgcagtca gtattgatgc
      721 aaattcaacc gacaattcag cgttttgcca gaatgcttgc cagcgttttg cagcttgagg
      781 ttgagatcgt tgatgaaaac ttgtgtcgcg tcgccggaac gggcgcgtat gggaagtttc
      841 ttggtcgcca gttgagcggc aactcacgcc tgctccgcca cgtcctggaa acgaaaactg
      901 aaaaagttgt gacacagtct cgcttcgatc ccctttgcga aggttgcgat agtaaagaaa
      961 attgccgtga aaaagcattt ctgggtacgc ctgtcatttt acaggatcgt tgtgttgggg
     1021 tgataagttt gattgccgtt acccacgagc aacaagagca tatcagtgat aatttacgcg
     1081 aattttctga ttatgttcgc catatatcca ccatttttgt ttcgaaactt ctggaggatc
     1141 aggggccagg agataacatc agtaaaatat tcgcgaccat gatcgataat atggatcagg
     1201 gcgtattagt tgttgatgat gaaagtcggg ttcagtttgt taatcagact gccttaaaaa
     1261 cacttggtgt tgtacaaaat aatattattg ggaaacctat ccgtttcaga ccattaacat
     1321 ttgagagtaa ttttactcat ggacatatgc agcatattgt ttcgtgggac gataaaagtg
     1381 aattaatcat tggtcaattg cataacattc agggccgaca attattttta atggcatttc
     1441 accaatcgca taccagtttt tctgtagcaa atgcacctga tgaaccacat attgaacaat
     1501 tggttggcga gtgccgtgtt atgcggcaat taaaacgact cattagccgt attgcaccca
     1561 gcccatccag cgttatggtg gttggtgaaa gcggcacggg taaagaagtc gtcgcccgag
     1621 caatccataa gttgagcgga agacggaata aaccctttat tgctatcaac tgtgccgcga
     1681 ttccggagca gcttctggaa agcgaactgt tcggttatgt taaaggcgca tttactggcg
     1741 cttctgccaa cggtaaaaca gggttgattc aggcggcgaa tacgggcacg ctgtttctcg
     1801 atgaaatagg tgatatgcca ttaatgttgc aggctaaatt actgcgcgct attgaggcgc
     1861 gtgaaattct gccgattggt gccagtagcc caatacaagt cgacattcgc atcatttctg
     1921 caactaatca gaatttggcc cagttcattg ccgaaggtaa attccgcgaa gatctcttct
     1981 accgacttaa tgttatcccg ataactctgc caccgctgcg tgaacgtcag gaagatattg
     2041 aactattggt gcattacttt ttacatctgc atacccgtcg tctgggatcg gtttatcctg
     2101 gcattgctcc cgatgtcgtc gaaatattgc gtaagcatcg ttggcccgga aacctgcgcg
     2161 agttaagcaa tttgatggaa tatctggtta acgtagttcc ttcaggtgaa gttatcgaca
     2221 gcacgctatt gccgccaaat ctgctgaata atggcacaac ggagcaaagt gatgtaacag
     2281 aggtcagtga ggcgcacctg tcactcgatg atgcgggcgg cacggcgctg gaggagatgg
     2341 aaaagcaaat gatccgcgag gcgctttcac gtcataacag caagaagcaa gttgctgatg
     2401 aactgggcat cggcattgct acgctctatc gcaagattaa gaaatatgag ttgttaaaca
     2461 cataacctca gtgaatccgg cctgaattca ggccggatat ccttttactt cgttttctcg
     2521 caatccagaa ctgtatttac aatcatctga taccccgtgc agcgacaaag atttcccgcc
     2581 agtccgcgac gaatttccgt aatggttaat ggcttctcgc gtggtttcgc cagcattgcc
     2641 gtggtagcca taatcaggcc aggcgtacaa aacccgcact gcactgcgcc ggatttcgca
     2701 taagcctgct gaacatgaga aagttttccg cctttcgctt caccttccag cgtgcggatc
     2761 tcttttcctt cagcccaggc ggcaaggtat aagcaactgt ctattgctgt gccgtcgacc
     2821 aacaccgtac aggcaccaca ttcacccacg cagcaccctt gtttgacact tagcagtcct
     2881 tgttcgcgga gtaattccga gagcggcgtg cctggtgcgg cgtgaagctg aaaaggcatc
     2941 ccgttaatgg tgcattcgat ggtaattgtt tcgctgtgat tcattgcaat tttccccccg
     3001 ccgcggcgac ggcttcgcta atcacttttt tggtcatcgt ctggatgaga tgcagacgaa
     3061 actctttact ggcccgccat gaagaacgcg gggcgacatc ttgcaggaca gattcgctga
     3121 tagcttccag cgtttgcagg tttaatggcg cattttgtgc agtctgttcg gcatgttggc
     3181 agcgaatcgg cgttggcgcg gcaacaccaa atgccaggcg taattcgctg aaattgccgt
     3241 tatccagtcg gcaatgtgcg gcgcagccaa tcgttgaaat atccattgcg tcgcgcatgg
     3301 catatttaaa atgcgcgctg cccgcgtgtt ctttcggctg tggcggaaaa tgaaaggcga
     3361 cgaggatttc gtcatgctca agagacactt tgcccggccc ggtgtgaaag ccattaatcg
     3421 ggacgaaacg aacaccgcgc ggggagtgga tctccagttt cgcgtcataa attagcgttg
     3481 gcgtggcaga atctgcgctg gtggcaccgt tgcaaatatt tccaccgtag gtagcgacgt
     3541 tacggatctg cagtccagca atggacatgg ccgcagcaca taacgccggg agatgacgtt
     3601 gagttatagg atcttctatt agctgggtaa atgtcgttgc agagccgata cgtagcgagc
     3661 catcttccgc cagcgtaatt ccccgcagct ccgccagatt atgaatatca acaatatggc
     3721 gataacggtc attgtgatgg tggagctgaa tcagtacgtc agtgccaccg gcgagcagtt
     3781 tggcctgcgg gttgttagcc agcaggttga tggcatcggc aagggttgct gcgcgatggt
     3841 aagaagcaaa atcaaacatg atgttatcct caaatcaatc ctgccagatg gaactcttca
     3901 tataaccgtt ttggcgtcag cggcagtgta ttgattgcaa caccggtagc catcttcacc
     3961 gcgttacgaa tagcagcggc aacaggaatt attggtggct cacccagtga cttatgtccg
     4021 tatgcggatt gcggctcatt gatttcgacg aacgcgcttt ccagttgtgg cagatccggc
     4081 atggtcggca ttttgtaatc cagcagattg gggttacgga ccacgccgct tttagcatcg
     4141 atgatcatct cttcaaatag cgcccagcca atgcccattc ccattccgcc gtgtacctga
     4201 ccttctgcca gcagtggatt aagaatatgc cctgaatcat gaacgttgag gatgcggttg
     4261 atggtgactt tgcacagcgc aatatcgacc gtcagatcaa caaaggtaca gccaaacgcc
     4321 ggtgggttag tggtggtttt gatggagctt tcagcagaga gctgcccgcc gcgttcaggg
     4381 tggtagaaag cgtccatcgc caaatctttt aacgacatta acggctcttc cggtcgttca
     4441 accagcacga tatggccttt tatcagggtc agattcatcg ctgactgatg tagcatgact
     4501 gcggcgtgag cgatgatttt ctcttttaat aatagtgccg cactgcgcag cgcaggcgcg
     4561 gcaacatagc tctggcgtga ggcaaatgtg ccgggatcga acggcgtaac gtcggtatct
     4621 tgagttgaaa taacgcgaac gtcgctgacc ggaaccccca cggtttctgc caccatttgc
     4681 gagaagacgg tgtcggcacc ctgaccgatt tccgtcgcgc cgctttgcac gttgatggtt
     4741 ccatcctgat tcatcagaag gcgcgcgcct gctatttcta cgccgacagg ccaggtgtta
     4801 gaggtgtagc taaaacaggc gacgccaacg ccgcggcgca aattgccttg ctggttctgg
     4861 cattctgcac ggcgtttttc ccattcaaag attttccggc ctttttcaag acactccggc
     4921 aaccctgcgc tgtaaatacg tttgcccgtg agcggattag catctccttc gcgggcggcg
     4981 ttgcgtaaac gaatttcaac aggatcaata cctaacgctg tcgcggcgtc atcaagcata
     5041 gactcaacgg caaatacgac ttgtggcgcg ccataaccac gcatcgcacc agccgagggg
     5101 aggttggtat agcaggtctt tgaactgtaa gcgtaggcac aacgaggata aaggtaagcg
     5161 actttattcc cccccgcaga agcgatggag tgcccgtgag atgcataagc gccggtgtta
     5221 gacagaacat ccagactata acctttcaat gttccgtcgc ggttcacgcc catttgcccg
     5281 tcaatggtaa aagcgtggcg ggtacgggtt gcgaggaaac actcttcacg gctaagggaa
     5341 actttcaccg gaatgccgcc aagcttgctg gtcaggaatg ccgccattgg ctcttccagt
     5401 acatcctgtt tattaccaaa accgccaccg acaaatggtt tgatgactcg tacgcatgac
     5461 cagggaatat ccagcgcctg accaaccacg cggcgaacaa tgtgcgggat ctgggtgctg
     5521 gaaacgatgg taattcgcga gtcatcctcc atccacgcca gcgatgttac gctttccatg
     5581 tgacaatgtt gaataacggg ggtctgatag tgcccctgta cctggtagtc ggcggcatcg
     5641 attgtttgtt ggacattacc cgtcgacatc gtgctttgtt tcagtaaatt gccaccgtta
     5701 tggattggtg cagcgtcttc tgccagcgcc gcttctggcg tggtgataac gggtaattct
     5761 tgccactcaa tgctgaccaa ttgcgccgct ttttctgccg tgagttcatc gcgggccacg
     5821 acgatggcaa tggcgtcacc atgatgacga acatggcgag ttagcagtgc gcgatcggcg
     5881 gtatcgcgct tgttttcgtc aagtgtccag gcatgcccag ctgtagcgaa tggaatatca
     5941 ggcacatctt cccaggtaaa aatcgccagt acgcccggca aacttctggc ttgttcatca
     6001 ttaatactta cggcataacc atgtgcgata gggctacgta catatttcgc ataacacatg
     6061 cccgccataa cataatcgtc agtatatcgt gcccgcccgg tgaccttagc aatggcatcg
     6121 acgcgcatgc atgattcacc cgtagcggtt gcttcccgcg cttccataga aatcccctcg
     6181 atttgaacat ttggttctta tggcaaagat ttagtctaag caggcaagat ttacgccaga
     6241 aacgacgata agcgttaggg gaggtaggaa gtgtgatgac gttaaaaaaa cacagatatg
     6301 atacgaaaca ggagtctgaa taggggcagt gatacgtatc aatatgagtg gcgataaaat
     6361 caatgtgata aattgggatt attacgcatc agg
//
LOCUS       DADMIB010000205         6336 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.207, whole genome shotgun sequence.
ACCESSION   DADMIB010000205 DADMIB010000000
VERSION     DADMIB010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6336
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.207"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            29..151
                     /locus_tag="JNZ89_003941"
     CDS             29..151
                     /locus_tag="JNZ89_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001124879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HAY8937644.1"
                     /translation="MPKKMRTTRNLLLMATLLGSALFARAADKEMTIGAIYLDT"
     gene            167..1012
                     /locus_tag="JNZ89_003942"
     CDS             167..1012
                     /locus_tag="JNZ89_003942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001248814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HAY8937645.1"
                     /translation="MRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDA
                     IILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLSN
                     AAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDK
                     AISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELE
                     NNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATH
                     VDGLP"
     gene            1035..2546
                     /locus_tag="JNZ89_003943"
     CDS             1035..2546
                     /locus_tag="JNZ89_003943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY8937646.1"
                     /translation="MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGK
                     NGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGGRAVYQELSLVEG
                     LTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEI
                     ARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASC
                     ATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKP
                     KLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLETYEQGEIVINGEKITRPDYGDM
                     LKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMT
                     VKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVREL
                     AAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHSPVNVDELMSAILSVH"
     gene            2571..3569
                     /locus_tag="JNZ89_003944"
     CDS             2571..3569
                     /locus_tag="JNZ89_003944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY8937647.1"
                     /translation="MSASSLSLPLGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNA
                     PGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEV
                     PLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPID
                     ENEVLDWLGGQFLGVPVSALIMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGIN
                     VRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRG
                     SLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR"
     gene            3602..4696
                     /locus_tag="JNZ89_003945"
     CDS             3602..4696
                     /locus_tag="JNZ89_003945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HAY8937648.1"
                     /translation="MKINRIVNEGFMKTMLAAYLPGNSTVDLREVAVPTPGINQVLIK
                     MKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDR
                     VLVYHISGCGFCPNCRRGFPISCTGKGKAAYGWQRDGGHAEYLLAEEKDLILLPDALS
                     YEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDM
                     LPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALRSTA
                     DWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAI
                     THRFSLEQAGDAYALMASGKCGKVVINFPD"
     gene            4708..5580
                     /locus_tag="JNZ89_003946"
     CDS             4708..5580
                     /locus_tag="JNZ89_003946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HAY8937649.1"
                     /translation="MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATD
                     ASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLC
                     LVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQ
                     AQASGYWLEREQWLAGEFCEQLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEG
                     YAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPG
                     ESTTSEMSLRVEWL"
     gene            complement(5628..6050)
                     /locus_tag="JNZ89_003947"
     CDS             complement(5628..6050)
                     /locus_tag="JNZ89_003947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HAY8937650.1"
                     /translation="MNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQ
                     YMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDM
                     TGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR"
     gene            complement(6147..>6336)
                     /locus_tag="JNZ89_003948"
     CDS             complement(6147..>6336)
                     /locus_tag="JNZ89_003948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenoxybenzoate dioxygenase"
                     /protein_id="HAY8937651.1"
                     /translation="WLCRGNPETQKAIWFNLQNGVLIGAVTLNQGREIRPIRKWIQSG
                     KTFDAKLLIDENIALKSL"
BASE COUNT         1467 a         1515 c         1836 g         1518 t
ORIGIN      
        1 tgttaataaa aaccctacag gaggcactat gcctaaaaaa atgagaacaa cccgtaatct
       61 attattaatg gctacgctat taggtagcgc actatttgcc agggctgcgg ataaagaaat
      121 gaccattggt gcaatatacc ttgataccta gggatattac gctggagtgc gtcagggcgt
      181 tcaggatgcg gcaaaagatt cttcagtaca ggtacagtta attgaaacta acgcccaggg
      241 tgatatttcg aaagaaagta cctttgttga taccctcgtg gcgcgtaatg tcgatgccat
      301 tattttatcg gcagtgtctg aaaatggcag tagccgtacc gttcgtcgcg ccagtgaagc
      361 gggtattccg gtgatttgct acaacacctg tattaatcaa aagggtgtcg ataaatatgt
      421 ctcggcgtat ctggtcggcg atccactgga atttggtaaa aaactgagta acgctgccgc
      481 cgattatttt attgccaata aaattgacca gccgaaaatt gccgtcatca attgcgaagc
      541 ctttgaagtt tgtgtgcagc gacgtaaagg atttgaagaa gtattaaaat cccgcgttcc
      601 cggcgcgcaa attgtcgcta atcaggaagg gactgtttta gataaagcga tttccgttgg
      661 tgaaaaactg attatctcca cgccggatct caacgccatt atgggggagt cgggcggtgc
      721 gacactcggc gcggtaaaag cggtacgtaa tcaaaatcag gccggaaaaa ttgctgtttt
      781 cggttcggat atgacaaccg aaattgctca ggagctggaa aacaatcagg tgctgaaagc
      841 ggtagtggat atttccggta agaaaatggg caatgctgtt ttcgcgcaaa cattgaaggt
      901 tatcaataaa caagccgacg gtgaaaaagt gattcaggtg ccaatcgatc tctataccaa
      961 aacggaagat ggtaaacagt ggctggcaac gcacgttgat ggtctgccct aatcgctgat
     1021 tcgcagaggt ccctatgttc acggcaacag aggcagtccc ggtagcaaaa gtggtggcag
     1081 gaaataagcg ttaccccggc gtcgttgcgc tggataacgt taacttcacg ctcaataaag
     1141 gcgaagttcg tgcgctgtta ggtaaaaacg gcgcgggcaa atcgactctc attcgaatgc
     1201 ttaccggcag cgaacgcccg gatagcggtg atatctggat tggcgagacg cgactggaag
     1261 gtgacgaagc tacgttgact cgccgtgccg ctgaactggg gggtcgtgcg gtttatcagg
     1321 aattaagtct ggtggaaggg ctgacggtgg cagaaaacct ctgccttggt caatggcctc
     1381 gccgcaacgg catgattgat tacctgcaaa tggcgcagga tgcccaacgt tgcttacagg
     1441 cgctgggcgt tgacgttagt cctgaacaac ttgtttcaac gctaagcccg gcgcaaaagc
     1501 aactggtgga aattgcacgg gtgatgaagg gcgagccgcg cgtggtcatt cttgatgaac
     1561 ccaccagctc gcttgccagt gcagaagttg aactggtgat cagtgcggtg aaaaagatgt
     1621 cggcactggg cgtggcggtg atttatgtca gccaccggat ggaagaaatc cgccgcattg
     1681 cctcctgtgc caccgttatg cgcgatggtc aggtggcggg cgatgtgatg ctcgaaaaca
     1741 cctccacgca tcatattgtg tcgctaatgc tagggcgtga tcacgttgat attgcgccgg
     1801 ttgcccctca ggaaattgtg gatcaggccg tactggaagt ccgtgcgtta cgccataagc
     1861 ccaagctgga ggatatcagc tttacgttac gtcgcggcga agtgcttggc attgctggcc
     1921 tgctgggggc agggcgcagt gaattgctga aggcgattgt tgggctggag acgtatgaac
     1981 agggcgaaat tgttatcaac ggcgagaaaa tcacgcgccc cgattacggc gacatgctga
     2041 aacgcggcat tggctatacg ccagaaaacc gcaaagaagc ggggatcatt ccctggttgg
     2101 gcgttgacga aaatacagtg ctgaccaatc ggcaaaaaat cagcgccaac ggagtgctgc
     2161 aatggtccac catccgccgc ctgaccgaag aggtgatgca gcggatgacg gtcaaggccg
     2221 ccagtagcga aacgcccatc ggcacgcttt ctggtggcaa tcagcaaaaa gtggtgatcg
     2281 gtcgttgggt ctatgccgcc agccagattt tgttgctcga cgagccaacg cgcggcgtcg
     2341 atatcgaagc caaacagcag atttaccgta ttgtccgtga gctggctgcc gaaggaaaaa
     2401 gcgtggtgtt tatctccagt gaagtggagg agttgccgct ggtgtgcgac cgcatcctgt
     2461 tgttacagca cggtacgttc tcgcaggagt ttcactcgcc ggtcaatgtg gatgagctga
     2521 tgtccgccat tctgtctgtg cactgatgaa ttttaccgag gaacctgaag atgtctgctt
     2581 cgtcattatc attgccgctg ggcaagagcg tctcgctcaa acaatttgtc agtcgccata
     2641 ttaatgagat cggtttgctg gtggtaatcg ccattcttta tctggtcttc tccctgaatg
     2701 cgcctggctt tatctcattg aataaccaga tgaacgtgct tcgcgatgct gccaccatcg
     2761 ggatcgccgc ctgggcaatg acgctgatta ttatctccgg tgaaattgat gtcagcgttg
     2821 gaccgatggt ggcttttgtc tcggtgtgcc tggcattttt gctgcaattt gaagttccgt
     2881 tggcgattgc ttgtctgctg gtgttgctgt taggcgcgct gatgggaacg ctcgccgggg
     2941 tgctgcgcgg cgtgtttaac gtgcccagtt tcgttgccac actggggctg tggagcgccc
     3001 tgcgcggaat ggggctgttt atgaccaacg cactgccagt gccgattgac gaaaacgagg
     3061 tgctggactg gctgggcgga caatttctcg gtgtgccagt atccgcgctg atcatgatgg
     3121 tgttgtttgc gctgtttgtg ttcattagcc gaaaaaccgc cttcgggcgc tcggtttttg
     3181 ccgttggcgg taatgccacg gcggcgcagt tgtgcggtat taacgttcgt cgagtgcgca
     3241 ttcttatctt taccctttcg ggattattag cggcggtgac cggcattttg ctggcggcac
     3301 gcctcggttc cggtaacgca ggtgccgcaa acggtctgga gtttgacgtc atcgccgcgg
     3361 tcgtggtcgg cggtacggca ctttccggcg gtcgcggttc cctgttcggt acattgcttg
     3421 gtgtgctggt gattacgcta atcggtaacg gtctggtgct gctcggtatt aactcctttt
     3481 tccagcaggt ggtacgcggc gtcatcatcg tggtggcggt gctggcgaat atcttgctga
     3541 cccagcgaag cagtaaagcg aaacgctaaa ccttaacgcc cctggcgcgg gtgcggcagg
     3601 gatgaaaatt aatcgtattg ttaatgaggg atttatgaaa acgatgctgg cagcttattt
     3661 accaggaaat tcaaccgtcg atctgcggga agttgcggtg ccgacgccgg ggattaacca
     3721 ggtactgatc aaaatgaaat cctccgggat ttgcggaagc gatgtccact atatctatca
     3781 tcaacaccgt gccacggcgg cggcacccga taaaccgtta taccagggat ttatcaacgg
     3841 tcatgaacca tgcgggcaga ttgtggcgat ggggcaaggc tgtcgccatt ttaaagaggg
     3901 tgatcgcgtg ctggtgtatc acatttctgg ctgtggtttt tgcccgaact gccgccgcgg
     3961 ctttcctatc tcttgtactg gcaaaggaaa agcggcttac ggctggcagc gtgacggcgg
     4021 tcatgccgaa tacttgctgg cggaagaaaa agatctgatc ctcctgccgg atgcgcttag
     4081 ctacgaagat ggtgcgttta tcagttgcgg cgttggtaca gcgtatgaag gaattttgcg
     4141 cggcgaagtt tccggcagtg ataacgtgct ggtggtcggt ctggggccag tcggcatgat
     4201 ggcgatgatg ctggcgaaag gtcgcggtgc aaaacggatc atcggcgttg atatgctgcc
     4261 ggaacgtctg gcgatggcaa aacagttagg ggtgatggat cacggctatt tagcaaccac
     4321 cgaaggtctg ccgcagatta tcgccgaact cacccacggt ggcgcggatg ttgcgctcga
     4381 ttgttctggt aatgccgcag gtcgcttgct ggcactgcga tccaccgctg attggggacg
     4441 ggtggtttac atcggagaaa ccggaaaagt ggagttcgag gtcagcgccg atctgatgca
     4501 ccatcaacgg cggattatcg gctcctgggt gaccagtctg ttccatatgg aaaaatgcgc
     4561 ccatgatctg acggactgga aactgtggcc gcgtaacgcc attacccatc gcttctcgct
     4621 ggaacaggct ggagatgcct atgcgctgat ggcgagcggc aaatgcggga aagttgtgat
     4681 taacttcccg gattaaggag ttagcggatg accatctata ccttatctca cggaccgcta
     4741 aagctggatg tctctgacca gggcggcgta atcgaaggct tctggcgtga cacgacgccg
     4801 cttttacgtc ctggtaaaaa aagcggtgtg gcaaccgatg cttcctgttt tccgctggtg
     4861 ccgtttgcaa accgggtgag cggcaatcgt tttgtctggc aggggcgtga gtatcaactg
     4921 caaccgaatg ttgagtggga tgcgcactat ctacacggcg atggctggct gggcgagtgg
     4981 caatgtgtct cgcacagcga tgatagcttg tgtctggtgt atgaacatcg cagcggtgtc
     5041 tatcactatc gggtaagtca ggcgtttcat ttaacggcgg atacgctgac ggtgacgctc
     5101 tctgtcacca atcaaggggc agagacgctg ccatttggta ccggctggca tccttatttt
     5161 ccgttgtcac cacaaacgcg gattcaggcg caggcgagcg gttactggct ggagcgggag
     5221 cagtggctgg cgggtgagtt ttgcgagcag ctaccgcagg aactggattt taaccagctc
     5281 gcgccgttgc cgcgccagtg ggtgaacaat ggttttgccg gatggaatgg tcaggcccgc
     5341 atcgagcagc cgcaggaagg ttatgccatc atcatggaaa cgacgccacc tgcaccgtgt
     5401 tatttcatct ttgtttccga ccctgcgttt gataaaggat atgcgtttga tttcttctgt
     5461 ctggaaccga tgagccatgc gccggatgat catcatcgcc cggaaggggg tgatctcatt
     5521 gcgctagcac caggggaatc aacaacttca gagatgtcgt tgcgggtaga gtggctgtaa
     5581 tttattaaat gccggataag gcgttcacgc cgcatccggc atctttccta acgccgatcg
     5641 agagaaattg cccccggccc ggtaattgcc aatagcaaga acgcgccagc gatactgaca
     5701 ttcttccaga aattaatcat atttggccca accgcatcgc cggtcatatc ccagtaatgg
     5761 tgaccaatca ccgccgtacc cagcgtgtag aaaataaaca gcaccgccag cggacgggtg
     5821 aaaaagccaa gcacgattaa tatcgcggcg ggcacttcca taactaccgc aataatcgct
     5881 gccagcatcg gcattggcgc gcccaacgag gccatatatt ggaccgtacc gtcaaagccc
     5941 atcattttgg gaaaacccaa aataatgaaa attaagacca cggcgatacg ggcaattaat
     6001 aacaaaacgg ggcgggcagc tccaaaatca aaataacgta gtgtgttcat aaccaatccc
     6061 tttgcaagat aatgtgattt aaacgtaata cacactcttg cacctcgcca cgccccaggc
     6121 gttgagatat tcgctaatta tcctggttac agtgatttaa gcgcgatgtt ctcatctatc
     6181 agcagtttcg catcaaacgt tttgccgctc tggatccatt tgcgaattgg gcgaatctca
     6241 cgcccctgat tcagcgtgac cgcaccgata agcacgccgt tttgcagatt aaaccaaatc
     6301 gccttctgag tttccgggtt gccacgacaa agccag
//
LOCUS       DADMIB010000206         6317 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.208, whole genome shotgun sequence.
ACCESSION   DADMIB010000206 DADMIB010000000
VERSION     DADMIB010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6317
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.208"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            285..626
                     /gene="raiA"
                     /locus_tag="JNZ89_003949"
     CDS             285..626
                     /gene="raiA"
                     /locus_tag="JNZ89_003949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HAY8937652.1"
                     /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
                     PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK
                     DANFVEEVEEE"
     gene            730..777
                     /locus_tag="JNZ89_003950"
     CDS             730..777
                     /locus_tag="JNZ89_003950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937653.1"
                     /translation="MKHTPFFFAFFFTFP"
     gene            877..2037
                     /gene="pheA"
                     /locus_tag="JNZ89_003951"
     CDS             877..2037
                     /gene="pheA"
                     /locus_tag="JNZ89_003951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydratase"
                     /protein_id="HAY8937654.1"
                     /translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR
                     PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH
                     SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN
                     TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK
                     FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQQQN
                     FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH
                     GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT"
     gene            complement(2080..3201)
                     /gene="tyrA"
                     /locus_tag="JNZ89_003952"
     CDS             complement(2080..3201)
                     /gene="tyrA"
                     /locus_tag="JNZ89_003952"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HAY8937655.1"
                     /translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPI
                     YVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
                     IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG
                     KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
                     KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
                     LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLKQG
                     DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ"
     gene            complement(3212..4282)
                     /gene="aroF"
                     /locus_tag="JNZ89_003953"
     CDS             complement(3212..4282)
                     /gene="aroF"
                     /locus_tag="JNZ89_003953"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroF"
                     /protein_id="HAY8937656.1"
                     /translation="MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKTI
                     SDIIAGRDPRLLVVCGPCSIHDLETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
                     VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW
                     SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ
                     VALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
                     RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
                     MTDALLREIHQDLNGQLTARVA"
     gene            4490..4855
                     /locus_tag="JNZ89_003954"
     CDS             4490..4855
                     /locus_tag="JNZ89_003954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2799 domain-containing protein"
                     /protein_id="HAY8937657.1"
                     /translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG
                     SAIKDDDAFGDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVESASQ
                     LHEVWQKGADENASTIRLN"
     gene            5005..5523
                     /locus_tag="JNZ89_003955"
     CDS             5005..5523
                     /locus_tag="JNZ89_003955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HAY8937658.1"
                     /translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR
                     WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP
                     TFQMELTEQYPSKALLLIAKQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
                     DVLMLARKKNDG"
     gene            5513..>6317
                     /gene="dgcN"
                     /locus_tag="JNZ89_003956"
     CDS             5513..>6317
                     /gene="dgcN"
                     /locus_tag="JNZ89_003956"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcN"
                     /protein_id="HAY8937659.1"
                     /translation="MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLT
                     LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL
                     ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL
                     AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH
                     RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN"
BASE COUNT         1718 a         1612 c         1419 g         1568 t
ORIGIN      
        1 aaaaagagcc agtcagttgc ttaactgact ggcattacag cccttgagct gccgtttttt
       61 tattctgtta gttgtgaaac tgaagcgatt tagtcactat cgatctcatc aaatatggct
      121 cgctttgaga tattcctcaa gtaaaaaaac acctcttcct gcgatttctc acaaaaaaga
      181 ttcgttgaca aaaagtgaca aaattatgag attcccatca cacattttga catcaggaac
      241 ggtatgctga attcaccaag acgggaagac aagaggtaaa atttatgaca atgaacatta
      301 ccagcaaaca aatggaaatt actccggcca tccgccaaca tgtcgcagac cgtctcgcca
      361 aactggaaaa atggcaaaca catctgatta atccacatat cattctgtcc aaagagccac
      421 aagggtttgt tgctgacgcc acaatcaata cacctaacgg cgttctggtt gccagtggta
      481 aacatgaaga tatgtacact gcaattaacg aattgatcaa caagctggaa cggcagctca
      541 ataaactgca gcacaaaggc gaagcacgtc gtgccgcaac atcggtgaaa gacgccaact
      601 tcgtcgaaga agttgaagaa gagtagtcct ttatattgag tgtatcgcca acgcgccttc
      661 gggcgcgttt tttgttgaca gcgtgaaaac agtacgggta ctgtactaaa gtcacttaag
      721 gaaacaaaca tgaaacacac accgtttttc ttcgcattct tttttacctt cccctgaatg
      781 ggaggcgttt cgtcgtgtga aacagaatgc gaagacgaac aataaggcct cccaaaccgg
      841 ggggcctttt ttattgataa caaaaaaggc aacactatga catcggaaaa tccattactg
      901 gcgctgcgag agaaaatcag cgcgctggat gaaaaattat tagcattact ggcagagcgg
      961 cgcgaactgg ccgtcgaggt gggaaaagcc aaactgctct cgcatcgccc ggtacgagat
     1021 attgatcgtg aacgcgattt actggaaaga ttaattacgc tcggtaaagc gcaccatctg
     1081 gacgcccatt acattactcg cctgttccag ctcatcattg aagattccgt attaactcag
     1141 caggctttgc tccagcaaca tctcaataaa attaatccgc actcagcacg catcgctttt
     1201 ctcggcccca aaggttctta ttcccatctt gcggcgcgcc agtatgctgc ccgtcacttt
     1261 gagcaattca ttgaaagtgg ctgcgccaaa tttgccgata tttttaatca ggtggaaacc
     1321 ggccaggccg actatgccgt cgtaccgatt gaaaatacca gctccggtgc cataaacgac
     1381 gtttacgatc tgctgcaaca taccagcttg tcgattgttg gcgagatgac gttaactatc
     1441 gaccattgtt tgttggtctc cggcacgact gatttatcca ccattaatac ggtctacagc
     1501 catccgcagc cattccagca atgcagcaaa ttccttaatc gttatcctca ctggaagatt
     1561 gaatataccg aaagtacgtc tgcggcaatg gaaaaggttg cacaggcaaa atcaccgcat
     1621 gttgctgcgt tgggaagcga agctggcggc actttgtacg gtttgcaggt actggagcgt
     1681 attgaagcga atcagcaaca aaacttcacc cgatttgtgg tgttggcacg taaagccatt
     1741 aacgtgtctg accaggttcc ggcgaaaacg acgttgttaa tggcgaccgg gcaacaagcc
     1801 ggtgcgctgg ttgaagcgtt gctggtgctg cgcaaccaca atctgattat gacccgtctg
     1861 gaatcacgcc cgattcacgg taatccatgg gaagagatgt tttatctgga tattcaggcc
     1921 aatcttgaat cagcggaaat gcaaaaagca ttgaaagagt taggtgaaat tacccgttca
     1981 atgaaggtat tgggctgtta cccaagtgag aacgtagtgc ctgttgatcc aacctgatga
     2041 aaaggtgccg gatgatgtga atcatccggc actggattat tactggcggt tgtcattcgc
     2101 ctgacgcaat aacacgcggc tttcactctg aaaacgctgt gcgtaatcgc cgaaccagtg
     2161 ctccaccttg cggaaactgt caataaacgc ctgcttatcg ccctgcttca gcaactcaat
     2221 cgcctcgccg aaacgcttat agtaacgttt gattaacgcc agattacgct ctgacgacat
     2281 aataatgtcg gcataaagct gcggatcctg agcaaacagt cgcccgacca tcgccagctc
     2341 aaggcggtaa atcggcgaag agagcgccag aagttgctca agctgaacat tttcttctgc
     2401 cagatgcagc ccataagcaa aagtagcaaa gtggcgcaga gcctgaataa acgccatatt
     2461 ctgatcgtgc tcgacagcgc taatacgatg cagccgagcg ccccagacct gaatttgctc
     2521 cagaaaccat tggtatgctt ccggcttacg tccatcacac cagaccacaa cttgctttgc
     2581 caggctaccg ctgtccgggc cgaacatcgg gtgtaacccc agtaccgggc catcgtgcgc
     2641 cgccagcatg gcctgtaatg gtccattttt cactgatgcc agatcaacca gaatacaatc
     2701 tttcggtaaa ggcggtaatt tgccgataac ttgctcagta acgtggattg gcacactaac
     2761 aatcaccatt ccggcatcgg caacaatatc agccgctcga tcccagtcat gttgctccag
     2821 aatccgcacc tgataacccg agagtgtcag catcttctcg aacaggcgtc ccatctgacc
     2881 gccaccgccg acgataacca ccggacgcag tgacggacaa agtgttttaa atcctttgtc
     2941 gttttcactg gagtaagatt cacgcatcac ccgacgcaaa acatcctcaa tcagatctgg
     3001 cggtaccccc agagcttccg cctctgcacg acgcgaggcc aacatagatg cctcgcgctc
     3061 cggaacataa ataggcagtc caaagcggct tttcacctcg cccacttcag caaccagttc
     3121 cagacgcttc gctaataaat tcagcagcgc tttatcgact tcatcaattt gatcgcgtaa
     3181 tgcggtcaat tcagcaacca taataaacct cttaagccac gcgagccgtc agctgcccgt
     3241 tcagatcctg atgaatttca cgcagcaagg catcggtcat ttcccagcta atgcaggcat
     3301 cggttacgga tacaccgtat ttcatttcac tgcgcggttg ctcagaagac tgattgccct
     3361 cgtggatatt actttcgatc atcagaccaa taattgagcg attgccatct ttgatttgag
     3421 caaccacgga ttctgccacc gcaggctgac ggcgataatc tttattggaa ttaccgtggc
     3481 tgcaatctac catcagagac gggcgcagtc ccgcctgttc catctctttt tcacattgcg
     3541 caacatccgc agggctatag ttcggcgctt taccaccgcg caggatgaca tgcccgtccg
     3601 gattcccctg agtttgtagc aacgcaacct gccctgcctg gttaatgcca acaaaacggt
     3661 gcggctgggc ggcggcgcgc atagcgttaa ttgctgttgc cagactgccg tcggtgccgt
     3721 ttttaaaacc aaccggcatg gaaagcccgg aggccatttc acggtgagtt tgcgattccg
     3781 ttgtacgagc accaattgct gaccagctaa acagatcgcc caggtattgc gggctattcg
     3841 gatctaacgc ttccgtcgcc agtggcagtc ccatattcac cagctcaagc agcaatttac
     3901 gcgcgatctg cagcccggct tctacatcaa aagagccatc catatgggga tcgttaatta
     3961 accctttcca gccgacagtg gtacggggtt tttcaaaata gacgcgcatt accagataga
     4021 ggctatcgct gacctctgcg gcaagggctt taaatcgacg agcatattcc agagcagttt
     4081 ccagatcatg aatggaacaa ggaccacaaa ctaccagcag acgaggatcg cgcccggcga
     4141 taatatctga aatggtttta cgcgagtcag caatctgggc ttcttgttgc aggctcaatg
     4201 gaaaagcggc cttcagttgt tccggagtca ttaaaacctg ttcgtcggta atatgtacgt
     4261 tattcagcgc gtctttttgc atgatggcga tcctgtttat gctcgtttgc gatagttgat
     4321 cctcagcgag gatgacgtaa cgataacaca taaagtaaag ttttcaatcc atatttcgta
     4381 cgcttttctt tacacgaaca atttactcgc gctttgatgc ttatttcgta caaataaatt
     4441 tacaccccct ttaaaaacaa tccgctatgc tttgaaaaag gagaaagaaa tgatgaaaaa
     4501 gtttatcgcc cccttattgg ctttactggt tagcggatgt cagattgatc cttatactca
     4561 cgcgccaacc ttgaccagca ccgactggta tgatgtcggt atggaagatg cgatatcggg
     4621 cagcgccata aaagatgacg atgcatttgg cgattcacag gcggatcgcg gtctatacct
     4681 taaaggatat gccgaaggac aaaagaaaac ttgccagacc gattttactt atgcccgggg
     4741 actttccggt aaaagctttc ctgccagctg taacaatgtt gaaagtgcca gccaactgca
     4801 tgaagtatgg caaaaagggg ctgatgaaaa tgccagcaca atacgattaa attaattaaa
     4861 accccacaaa taaattaaac ataagatttt actcattgtg ttttatttct cacattgatg
     4921 acgatcgcat gaaaaaatga tattttaatg agcattctga aaaaatatcg atgcatttcg
     4981 agcgaagaag gtggggatcc ctgaatgcgt ttttctcacc gactgttctt acttctgatt
     5041 ctcctgctga cgggagcacc aatactcgct caggagcctt ctgacgttgc gaaaaacgtg
     5101 cgtatgatgg tttccggtat tgtcagttac acccgctggc ctgcgctatc agggccacca
     5161 aagttatgta tcttttcatc ttcacgtttt agtaccgccc tacaagagaa tgccgcgaca
     5221 tctttgcctt atctgcctgt catcattcac actcaacaag aggcgatgat ttcaggctgc
     5281 aatggttttt attttggcaa cgagtcaccg acattccaga tggaattaac cgaacaatat
     5341 ccgtcaaagg cgttattatt aattgccaaa caaaataccg agtgcattat tggtagcgcc
     5401 ttttgtctga tcatccacaa taatgacgtc agatttgccg taaacctgga tgccttatcg
     5461 cgtagcggtg taaaggtcaa cccggatgtc ttaatgctcg cacggaagaa aaatgatgga
     5521 taacgataat tctcttaata agcgccccac gtttaaaaga gcattacgca acatcagtat
     5581 gaccagcata tttatcacta tgatgctgat ctggttgctg ctttccgtga cctcggtgct
     5641 gaccctgaaa cagtacgcgc aaaaaaacct ggcactgaca gcagcaacaa tgacttacag
     5701 tctggaagca gctgtcgttt ttgccgatgg ccctgcagca actgaaacac tggcagcgct
     5761 gggccagcaa gggcaatttt caactgcaga agtacgtgat aagcagcaaa atattctggc
     5821 gtcctggcat tacacccgta aggatccagg cgatactttc agcaatttca taagccactg
     5881 gctcttcccc gcccccatca ttcagccgat tcgtcacaat ggtgaaacca ttggcgaagt
     5941 acgcttaacc gctcgcgaca gttcaatcag ccattttatc tggttttcgc tcgccgtact
     6001 gaccggttgt attctgctgg catcaggcat cgcaattacc ctcacccgcc atttgcacaa
     6061 tggcctagtg gaagcgctga aaaatatcac cgatgtcgta catgatgtgc gttccaaccg
     6121 caatttttcc cgacgagttt ctgaagaacg tatcgctgag tttcaccgct tcgctctcga
     6181 cttcaacagt ctgctggatg aaatggaaga gtggcagctt cgtttacagg ccaaaaatgc
     6241 gcagcttctg cgtaccgcgc tacatgaccc attaaccggg ctggctaacc gcgcagcgtt
     6301 tcgtagcggc atcaata
//
LOCUS       DADMIB010000207         6291 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.209, whole genome shotgun sequence.
ACCESSION   DADMIB010000207 DADMIB010000000
VERSION     DADMIB010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6291
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.209"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(83..619)
                     /gene="ssb1"
                     /locus_tag="JNZ89_003957"
     CDS             complement(83..619)
                     /gene="ssb1"
                     /locus_tag="JNZ89_003957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein SSB1"
                     /protein_id="HAY8937660.1"
                     /translation="MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDK
                     ATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEV
                     VVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSA
                     PAAPSNEPPMDFDDDIPF"
     gene            873..3695
                     /gene="uvrA"
                     /locus_tag="JNZ89_003958"
     CDS             873..3695
                     /gene="uvrA"
                     /locus_tag="JNZ89_003958"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HAY8937661.1"
                     /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
                     EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA
                     ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
                     CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEA
                     PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA
                     VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG
                     QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
                     HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK
                     DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
                     DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC
                     EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE
                     FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL
                     DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE
                     ILVSGTPETVAECEASHTARFLKPML"
     gene            complement(3730..4086)
                     /locus_tag="JNZ89_003959"
     CDS             complement(3730..4086)
                     /locus_tag="JNZ89_003959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HAY8937662.1"
                     /translation="MTISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVEN
                     RPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQ
                     AVNLRPEEKRKLLVQL"
     gene            complement(4090..4506)
                     /locus_tag="JNZ89_003960"
     CDS             complement(4090..4506)
                     /locus_tag="JNZ89_003960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HAY8937663.1"
                     /translation="MWYQKTLTLSAKSRGFHLVTDEILNQLANMPRVNIGLLHLLLQH
                     TSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMQGTSLVL
                     PLHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE"
     gene            complement(4617..5330)
                     /locus_tag="JNZ89_003961"
     CDS             complement(4617..5330)
                     /locus_tag="JNZ89_003961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class B acid phosphatase"
                     /protein_id="HAY8937664.1"
                     /translation="MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQA
                     PIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFW
                     EKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT
                     NMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTY
                     KPLPQAGAFGEEVIVNSEY"
     gene            5693..6235
                     /locus_tag="JNZ89_003962"
     CDS             5693..6235
                     /locus_tag="JNZ89_003962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005059113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937665.1"
                     /translation="MVINFITRDGDDDMNISYMNSNKTTSLPVELDALNNKDISYAKD
                     FSYVKDFFLYIETQLKIAKDFCRLGEEVSSSIASKVFHAFIDLVNKIRGKKDFMYICT
                     LCCFAEEVKGDYSHYRTFLFDIGNQYKVKLTQSGKKEFSLTLEFNDTIIESQKVTGNK
                     AKHILEDIEIFYRNKPDTYY"
BASE COUNT         1592 a         1554 c         1568 g         1577 t
ORIGIN      
        1 taacggaggc ttctttttta tggctggcag atgctttaat catccacctt aaaacaatat
       61 aacctattgt tttaatgaca aatcagaacg gaatgtcatc atcaaagtcc atcggcggct
      121 cgttagacgg cgctgccgga gcggactgct gcgggcgaga ctgcgcgccg ccgctgaact
      181 gattgccacc ctgcggctgc tgaggctgac cccaaccgcc ctgcggctga ccaccaccga
      241 tattaccacc tgccggagcg ccaccaccct gacgaccacc cagcatctgc atggtgccgc
      301 caacgttcac cacgacttct gtggtgtagc gatcctgacc ggattgatcg gtccatttac
      361 gggtacgcag ctgaccttcg atataaacct gagaaccttt acgcagatat tcgctggcca
      421 cttctgccag tttgccgaac agcacaacgc ggtgccattc agtctgttct ttcatctcgc
      481 cggtcgcttt atcacgccag gattcggaag tagccagcgt aatgttggca actgcgccac
      541 catttggcat gtagcgtact tccgggtcct gacccagatt accaacgaga ataaccttgt
      601 ttacgcctct gctggccatg ttcgtgtctc ctgaaaaaaa tcgttctgaa taagtgtaaa
      661 cgcgcgattg taccattacc aatagcgctt ttactatgtt gtgacctcgg ttccgggaaa
      721 caaacctggc cagacattgt tacacaacac tccggataat gcattccaat actgtatatt
      781 cattcaggtc aatttgtgtc ataattaacc gtctgtgatc gccggtagca ccatgccacc
      841 gggcaaaaaa gcgtttaatc cgggaaaggt gaatggataa gatcgaagtt cggggcgccc
      901 gcacccataa tctcaaaaac atcaacctcg ttatcccccg cgacaagctc attgtcgtga
      961 ccgggctttc gggttctggc aaatcctcgc tcgctttcga caccttatat gccgaagggc
     1021 agcgccgtta cgttgaatcc ctttccgcct acgcgcggca gtttctgtca ctgatggaaa
     1081 agccggacgt cgatcatatt gaggggcttt ctcctgccat ctcaattgag cagaaatcga
     1141 cgtctcataa cccgcgttct acggtgggga caatcaccga aatccacgac tatttgcgtt
     1201 tgttgttcgc ccgcgtcggc gaaccgcgct gtccggacca cgacgtcccg ctggcggcgc
     1261 aaaccgtcag ccagatggtg gataacgtgc tgtcgcagcc ggaaggcaag cgtctgatgc
     1321 tactcgcgcc aatcattaaa gaacgcaaag gcgaacacac caaaacgctg gagaacctgg
     1381 caagccaggg ttacatccgt gctcgtattg atggcgaagt ctgcgatctt tccgatccgc
     1441 cgaaactgga actgcaaaag aaacacacta ttgaagtggt ggttgatcgc ttcaaggtgc
     1501 gtgacgatct tacccaacgt cttgcggagt cgtttgaaac cgcgctggag ctttccggtg
     1561 gtacagcggt agtggcggat atggacgacc cgaaagcgga agagctgctg ttctccgcca
     1621 acttcgcctg cccaatttgc ggctacagta tgcgtgaact ggagccacga ctgttttcgt
     1681 ttaacaaccc ggcaggtgcc tgcccaacct gtgacggcct tggcgtacag caatatttcg
     1741 atcctgaccg cgtgatccaa aaccccgagc tgtcactggc tggcggtgcg atccgtggct
     1801 gggatcgccg caacttctat tacttccaga tgctgaaatc gctggcagat cactataagt
     1861 tcgacgtcga agcgccgtgg ggcagcctga gcgcgaacgt gcataaagtg gtgttgtacg
     1921 gttctggcaa agaaaacatt gaattcaaat acatgaacga tcgtggcgat acctccatcc
     1981 gtcgtcatcc gttcgaaggc gtgctgcaca atatggagcg ccgttataaa gagacagaat
     2041 ccagtgcggt acgtgaagaa ttagccaagt ttatcagcaa tcgcccatgc gccagctgcg
     2101 aagggacgcg tctgcgtcgg gaagcgcgcc acgtttatgt cgagaatacg ccgctgcctg
     2161 ctatctccga catgagcatc ggtcatgcga tggaattctt caacaatctc aaactagctg
     2221 gtcagcgggc gaagattgca gaaaaaatcc ttaaagagat cggcgatcgt ctgaaattcc
     2281 tcgttaacgt cggcctgaat tacctgacac tttcccgctc ggcagaaaca ctttccggcg
     2341 gtgaagccca gcgtatccgt ctggcgagcc agattggtgc gggcctggtt ggcgttatgt
     2401 atgtactgga cgagccgtct atcggcctgc accagcgcga taacgagcgc ctgttgggta
     2461 cgcttatcca tctgcgcgat ctcggtaata ccgtgattgt ggtggagcat gacgaagacg
     2521 caattcgcgc cgctgaccat gtgatcgata tcggtcctgg tgcgggtgtt cacggcggtg
     2581 aagtggtcgc agaaggtccg ctggaagcga tcatggcggt gcctgaatcg ttgaccgggc
     2641 agtacatgag cggtaaacgc aagattgaag tgccgaagaa acgcgttccg gcgaatccag
     2701 aaaaagtgct gaagctgaca ggtgcacgcg gcaacaacct gaaggacgtg acgctcacgc
     2761 tgccagtcgg tctgtttacc tgcatcacag gggtttcagg ttccggtaaa tcgacgctga
     2821 ttaacgacac actgttcccg attgcccaac gccagttgaa tggtgcgacc atcgccgaac
     2881 cggcaccgta tcgcgatatt caggggctgg agcatttcga taaagtgatc gatatcgacc
     2941 aaagcccaat tggtcgtact ccacgttcta acccggcgac ctataccggc gtgtttacac
     3001 ctgtgcgcga actgtttgcg ggcgtaccgg aatcccgtgc gcgtggttat acgccaggac
     3061 gtttcagctt taacgtccgt ggcgggcgct gcgaagcctg tcagggcgac ggtgtgatca
     3121 aagtggagat gcacttcctg ccggatatct acgtgccgtg cgatcagtgc aaaggtaaac
     3181 gctataaccg tgaaacgctg gaaattaagt acaaaggcaa aaccatccac gaagtgctgg
     3241 atatgaccat cgaagaggcg cgtgagttct ttgatgcggt gccagctctg gcgcgtaagc
     3301 tgcaaacgtt gatggacgtt ggtctgacgt acattcgcct ggggcagtcc gcaaccacac
     3361 tttctggtgg tgaagcccag cgcgtgaagc tggcgcgtga gctgtcaaaa cgcggcaccg
     3421 ggcagacgct gtatattctc gacgagccga ccaccggtct gcacttcgcc gatattcagc
     3481 aactcctcga cgtgctgcat aaactgcgcg atcagggcaa taccattgtg gtgattgagc
     3541 acaatctcga cgtgatcaaa accgctgact ggattgtcga cctgggacca gaaggcggca
     3601 gtggcggcgg cgaaatcctc gtctccggta cgccagaaac cgtcgcggag tgcgaagctt
     3661 cgcatacggc acgcttcctc aagccgatgc tgtaatcgtt aaggccgctt tctgagcggc
     3721 cttttccttt cagagttgta ccagcaattt acgcttttct tccggtcgta aattcactgc
     3781 ctgctgataa gacgcatcca ccagataata gatttgcgaa tccggcagcg aaccgtcgag
     3841 atacacggtg ctccagtgcg ctttattcag atggcggcta ggacgcacat cgctgtgctg
     3901 ctgacgtagc agctccgcca gctccgggct ggttttcagc gaaacagctg ggcgattttc
     3961 tacttctttc accatcgcaa acagtacatc ttccactttg atctgcgtcg ctttccagtc
     4021 gttatgcacg ctctgttctg cgcctagttt tgccatgcaa tattgtagca actccgaaat
     4081 ggtcattttt tactcccctt gtagtgtcgc gatgatgcga cgcgatccgc cgtggatgcg
     4141 atgttccccc agccagatgc cttgccaggt gccggtctga atacgccctt tatgtaacgg
     4201 caatacaagc gatgttccct gcattgagga tttgatatga gaaggcatat cgtctgctcc
     4261 ctcatagtca tgctcataat ttccgttgtc gggaacggtg cggaggaaaa aacgctccat
     4321 gtcgtggcgt acggtgggat cgcagttctc attaagtgtc agagaggcgg aggtatgttg
     4381 cagcaacaga tgcagtaagc cgatgttaac gcgcggcata ttagccagct gattcagaat
     4441 ttcatccgtt accagatgaa acccacgaga tttggcgcta agcgtgagcg tcttttgata
     4501 ccacatgtgc tgctccttga taaaactctc ttaatcagtt tgcagcaaga cagcgaaagg
     4561 ataaaggtgt gattaaaaaa acagcattcg ggagagcatc acgctctccc gctctgtcag
     4621 tattctgaat tgacgatcac ctcttcacca aacgcacccg cttgtggcaa gggtttgtag
     4681 gtagagttgg aggcgcgcag aatgcggata ccacgagcgc cgacatcgcg tgcggcggta
     4741 atatcattat cagaatcgcc ataaaaaatt cggatatttt tatcctgcag ccattgcgat
     4801 tttgtatttt gccctggttt atcgcccgca aagatcaccg gattcatgtt ggtggcagga
     4861 atatgaaaat tatccgccag cgtttttgaa accgtttctg ttttcgtcgg actacgacca
     4921 gtcacaaaga agatcgcgtc accgcggcgt acatgcatat caatcagctg gcgagcgacc
     4981 tcttttggaa tgctgaattc atcccagcca ttgttcattt tttcccagaa cacaggattt
     5041 ttcagataat cttcgctttc tggcgagaag gtttttttgc cgcgccagaa gcccgggctg
     5101 gaaaaaagta ccgtgtcatc gatatcaaac cccaccgcca ttggcggacg ccctgcgagg
     5161 ctattttcaa tttgtgcgac cgaaacccaa tgaattggtg cctgttcagc aagcctggca
     5221 acgttagtac cagggttaag cggtgaagga gatgaggcca gggcaacagc ggaactgttt
     5281 agagcgaaca ataagcaaac ggcactgatt gcctgtgtga tcttgcgcat atttttccct
     5341 aaatagtcag tatgttgaaa ctttttattg tgagatttgt tgcaaaaacc atctgaccat
     5401 aacgccagct gcaggggaaa ggaaggatta tctgcggttt ttgtgatgaa aagcaggatg
     5461 attatattta acccagtaaa tacgttcctg tctttttttg tataaaaaat gtttattact
     5521 cgatgtaagg atacattaat tttacgttta ttatgatgaa tcctctgcaa atgagcgaaa
     5581 tttgatagaa catttatctg ctgtacgatt taatgaactt aatgatacag cattacaaaa
     5641 acaatcgaag tttataaaga tgattcctga ttgaccagaa ccctatccta caatggtgat
     5701 taattttatt actcgcgatg gagatgatga tatgaatata tcatatatga atagcaacaa
     5761 aacgacatct ttacctgttg agctagatgc actaaataat aaagatatct cttatgccaa
     5821 agatttttct tatgtcaaag atttcttttt atacatagaa acacagttaa aaattgcaaa
     5881 agatttttgt agacttggag aagaagtatc aagttctatt gcaagtaaag tttttcacgc
     5941 atttattgat ttagttaaca aaatcagggg taagaaagac tttatgtata tttgcacgct
     6001 ttgctgtttt gccgaggagg ttaaaggtga ttattctcat tacaggacct ttttatttga
     6061 tattggtaat caatataagg ttaaacttac acaaagcgga aaaaaagagt tctctttaac
     6121 attagaattt aacgatacta taattgaatc tcagaaagtc acaggcaata aggcaaagca
     6181 tattcttgag gatatagaaa tattctatcg taacaaaccc gatacttatt attaaattta
     6241 ataatggtta gatgtgcaga aattattact ccacacgaaa aaatagggaa a
//
LOCUS       DADMIB010000208         6241 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.210, whole genome shotgun sequence.
ACCESSION   DADMIB010000208 DADMIB010000000
VERSION     DADMIB010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6241
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.210"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..603
                     /locus_tag="JNZ89_003963"
                     /pseudo
     CDS             1..603
                     /locus_tag="JNZ89_003963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_490532.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            817..1965
                     /locus_tag="JNZ89_003964"
     CDS             817..1965
                     /locus_tag="JNZ89_003964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY8937666.1"
                     /translation="MFEIDSLLLITSVIILSLLAVKLFDEISPIQLVDHGRNNQIDGM
                     RGFLAIFVLIHHAAIWHGYLLTGVWKTPSSNLLTNLGQVGVSFFFMITGYLFFSKIRS
                     SDQDWVRLYISRFLRLTPMFIVSLCLVLLVIGFKSRWSVHVSPASLTVSLMRWAPFTA
                     LGMPNINGVKDSFTINAAVTWTLVYEWFFYFSLPVIAALFKRRVSIHMIIISVLVLVI
                     FLCYPSKKIHVISFLFGLLASYSNNYVHRVAKAKITPIMIIALLSYEMIYFPTTYAPL
                     PLIICGVCFILIASGCDFYGILRLNLTRKLGETTYSIYLLHGVFLYCVMTWVIPSNYS
                     NYFFIMLISITAFCVTLLSCITFKLIELPFINITKQTAMKIRGIIKNT"
     gene            complement(2245..2856)
                     /locus_tag="JNZ89_003965"
     CDS             complement(2245..2856)
                     /locus_tag="JNZ89_003965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001057695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8937667.1"
                     /translation="MNNAELNSELIATMAGEITVYNFDVMSREYISASTEYLAIGVGI
                     PAYSCLDAPGAYKAGYAICRSADFNSWEYVPDHRGEIVFSTETGESKEITAPGDYPDN
                     TTTIVPLTPYDKWDGEKWVTDTEAQHSAAVDAAEAQRQSLIDTAMASINLIQLKLQAG
                     RNLTQAETSRLNTVLDYIDAVTATDTSTAPDVIWPELLDAHNM"
     gene            complement(2856..3638)
                     /locus_tag="JNZ89_003966"
     CDS             complement(2856..3638)
                     /locus_tag="JNZ89_003966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY8937668.1"
                     /translation="MHRIDTKTAQKDKFGAGKNGFTRGNPQTGTPATDLDDDYFDMLQ
                     EELCSVVEASGASLEKGRHDQLLTALRALLLSRKNPFGDIKSDGTVKTALENLGLGEG
                     SALPVGVPVPWPSATPPTGWLKCNGAAFSAEEYPELAKAYPTNKLPDLRGEFIRGWDD
                     GRGVDNGRGLLTLQDGAIVSHNHYWGIWTSRTNDQTLESFTGTTILKQITPLSPSIDF
                     DNYPIPNPAITEGGVVAATTKPAGANETRPRNVAFNYIVRAA"
     gene            complement(3642..4226)
                     /locus_tag="JNZ89_003967"
     CDS             complement(3642..4226)
                     /locus_tag="JNZ89_003967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HAY8937669.1"
                     /translation="MDVTNDDYIRLLSALLPPGPAWSASDPAIAGAAPSLTRVHQRAD
                     ALMQELDPRTTTELINRWERLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFY
                     LAQLAALGRPDATITRYDKSTFTCSSACTDAVNAPEWRYYWQVNMPAATNTTWMTCGD
                     PCDSALRFWGDTVVECVLNKLCPSHTYVIFKYPE"
     gene            complement(4217..5275)
                     /locus_tag="JNZ89_003968"
     CDS             complement(4217..5275)
                     /locus_tag="JNZ89_003968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001536648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HAY8937670.1"
                     /translation="MADSEFQRPTLAENISMLRNDLFARLDVSDTLRRMDEDVRAKVY
                     AAALHTVYGYIDYLAMNMLPDLCDESWLARHAAMKRCPRKGATVASGYMRWEGVSDGL
                     KVTAGSVIQRDDLVQYTTTDDAISSGGVLRVPIACSSAGAVGNADDGTALILVTPVNG
                     LPSSGVADTLTGGFDTEELETWRARVIERYYWTPQGGADGDYVVWAKEVPGITRAWTY
                     RHWMGTGTVGVMIASSDLINPIPEESTETAARQHIGPLAPVAGSDLYVFRPVAHTVDF
                     HIRVTPDTPEIRAAITAELRSFLLRDGYPQGELKVSRISEAISGANGEYSHQLLAPAD
                     NITIAKNELAVLGAISWT"
     gene            complement(5262..5687)
                     /locus_tag="JNZ89_003969"
     CDS             complement(5262..5687)
                     /locus_tag="JNZ89_003969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8937671.1"
                     /translation="MELWLTVNGKRTCASAPLDPLTRAVVISLFTWRRAEPDDNADVP
                     MGWWGDTWPAVQNDRYGSRLWLLQRSKLTNQLVQTVRGYIRECLQWMTDDGVVSRIDL
                     DIRRTGINELGNSITLRRRDGPVMISFDDLWSAITHGGQ"
     gene            complement(5687..6235)
                     /locus_tag="JNZ89_003970"
     CDS             complement(5687..6235)
                     /locus_tag="JNZ89_003970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015364403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein"
                     /protein_id="HAY8937672.1"
                     /translation="MRTIEAMQRQLLGLIGRAVVKSISAATKCQTVDVSLIAGEPKAG
                     VEHLEPYGFTARANSGAEAVVLFPDGDRSHAVVVTVSDRRYRLKGLQTGEVAVYDDQG
                     QSVTLTREGIVVDGAGKTITFRNAPEARFEMDLEVTGQVKDLCDSGGTTMSAMRLAYN
                     GHRHRENGQGSNTDKPDKAMEA"
BASE COUNT         1566 a         1619 c         1411 g         1645 t
ORIGIN      
        1 cccgcaccaa cgctgaaaat caaagacccg cactatgatg aaaagcacct tgctattgag
       61 caggcgctga ctcaggggca gacgaaacat cctgtgtttt atcaggatga agtcgacatc
      121 gacctgaata cgaaaatcgg cgtggactgg atgcccaaag ggcaacagaa acgcatcgct
      181 acgccgggac agaacctgaa gcattatctg gctggcgcac tgcactcagg tacgggacgg
      241 gttcactagg ccagtggcag cagcaaaagt tctgatttat ttatcagtct gttagaggca
      301 ttacggcgta gatatcggcg ggcgaaaacc atcacactgg tggcggataa ctacatcatc
      361 cataaaggcc gtaaagtgga gcgatggctg gaagaaaacc cgaagttccg gttgctgttc
      421 ctgccgacgt attcaccgtg gctgaatccg atagagcaac tttggttatc gttacacaag
      481 accataacgc gaaatcatca gtgccggtat atgtggcaga tactgaaaca ggtaacgcag
      541 tttatgaatg ctgctttacc gtttccgggt aatcaacacg gtatggccaa agtggagcgg
      601 taatatgcga agctatttag attcagtttg aatctcagcc ctgacattca ttctttaccg
      661 acgttccatt agcccaaatc tgagtatata acctcaattc aactgactaa atttaacaca
      721 atatcaatga caaatgtctt taccattggt acatacaatt gcaaaatcac catctctaag
      781 caataagact acgcatatta aagtgagtta tattaaatgt ttgaaattga tagcctatta
      841 ttaataacat ccgtgataat cttgtcatta ttggctgtaa aattatttga tgaaatttct
      901 cctatacaac ttgtcgatca tggaagaaat aatcagatag atggaatgag aggattctta
      961 gccatcttcg tacttattca tcatgccgct atttggcatg gctacttatt aaccggggta
     1021 tggaaaactc cgtcatcaaa cttattaaca aatttaggcc aagttggtgt ctcattcttt
     1081 ttcatgatca ccggatatct atttttttcg aagattcgct caagtgacca ggattgggta
     1141 agactatata tatcgagatt tctgcgatta actcctatgt ttattgtaag tttatgttta
     1201 gttcttcttg ttataggttt taaatcaaga tggagcgtac atgtctcccc tgcctctctt
     1261 actgtgtcac tcatgagatg ggcaccattc accgcattag ggatgccaaa tattaacggt
     1321 gttaaggact cattcactat caatgcagct gtaacatgga ccctcgttta cgaatggttt
     1381 ttttattttt cattaccggt tatagctgca ctcttcaaaa gaagagtcag catccacatg
     1441 attataataa gtgttttagt tctagtgatt ttcttatgtt acccatcaaa aaaaatacat
     1501 gttatttcat ttttatttgg actgttagcc tcttattcaa ataattatgt acatagagtt
     1561 gctaaagcta aaataacgcc tattatgata attgcattac taagttacga aatgatatat
     1621 tttcctacaa cctacgctcc actccctctc ataatttgcg gtgtttgctt tatacttatc
     1681 gcatcaggct gtgattttta tggtatattg agattaaatt taacaagaaa acttggtgaa
     1741 acaacatata gtatttatct tttacatgga gtattccttt attgtgtaat gacatgggtc
     1801 atccctagta attattctaa ttattttttt attatgttaa taagcattac tgctttttgc
     1861 gtcacacttt tatcatgcat aacatttaaa ttaattgaac tacctttcat taatataaca
     1921 aaacaaaccg ctatgaaaat caggggcata ataaaaaaca cttagtaatc aattgtcacc
     1981 taatcaagag gtggtttata gataacaata aagaaccttc gccatttccg gaggttcttt
     2041 tatatcctta tggtaaatat aaattataaa tattattttt atggtgttcc actatgaaca
     2101 gggaagctaa ataatgatta caaaaatatg taacttcagg caatgcaggg gctatgttat
     2161 tgccttaaca ccataatgag taatattgtg tcccgaggat aaaagtactg ttaattctta
     2221 ttgatgcttc aatagcactc aaaatcacat attatgtgca tccaacaact caggccagat
     2281 gacatccggc gcggtgctgg tatctgttgc cgtcaccgcg tcaatgtaat ccagcaccgt
     2341 gttaagtcgg ctggtttctg cctgcgtcag attccgtccg gcctgtaatt ttagttgaat
     2401 cagattgatg gaagccattg cagtatcaat cagcgactgg cgttgtgctt ctgctgcatc
     2461 gactgcggcg ctatgttgtg cctcggtatc cgtcacccat ttctcaccat cccatttatc
     2521 gtatggtgtt aacgggacga tagtggttgt attatcaggg taatcacccg gagctgtgat
     2581 ttcttttgat tctcctgttt cggtgctaaa gacgatttca ccgcgatggt ctggcacata
     2641 ttcccatgag ttaaaatctg cagaacggca gattgcataa ccagctttgt atgcgcctgg
     2701 agcatctaaa caggaatatg ccggaatgcc gacaccaata gcaagatatt cagttgaagc
     2761 tgaaatatac tcccgactca tgacatcaaa gttataaaca gtaatttctc ctgccatagt
     2821 ggcaattaat tcactgttta attctgcgtt attcattatg cagccctcac aatatagtta
     2881 aaagcgacat ttcgtgggcg tgtttcattc gcacctgcag gtttagtcgt tgccgcaaca
     2941 acaccaccct ctgtaatagc cgggttggga attgggtaat tatcgaagtc aatggacgga
     3001 gacaggggcg tgatttgttt taaaatcgtg gtgcctgtaa aactttccag agtctggtcg
     3061 ttagttcgtg aagtccagat tccccaatag tggttatgac tgacaatagc accgtcctga
     3121 agcgttaata atccccttcc gttatccact ccacgcccgt catcccagcc ccgaataaac
     3181 tcaccgcgta aatcaggtaa tttatttgtc ggataagcct ttgccagttc cgggtattct
     3241 tcagcagaaa aagctgctcc gttgcatttc agccagcctg ttggcggagt ggctgaaggc
     3301 cacggaacag gcacaccaac gggtaatgct gagccttctc ccaaaccaag gttttcgaga
     3361 gctgttttca ccgtgccatc cgatttgata tcgccaaacg gattcttgcg gcttaacagc
     3421 agcgcacgaa gcgcggtaag cagctggtca tgccgcccct tctccaggct ggcaccggat
     3481 gcctccacaa cgctgcaaag ctcctcctgc aacatgtcaa agtagtcatc atccagatcg
     3541 gtggcaggcg tgccggtctg ggggttacca cgggtaaaac cgttcttacc cgcgccgaac
     3601 ttatccttct gcgcggtttt cgtgtctata cgatgcatgg attactccgg atatttaaaa
     3661 atcacatagg tatgcgacgg gcagagtttg ttaagaacac actcgacaac ggtgtccccc
     3721 cagaagcgca gcgcggaatc acagggatcg ccacatgtca tccaggtggt gttggtggcg
     3781 gctggcatgt tgacctgcca gtaataccgc cattccggcg cattcaccgc gtcagtacag
     3841 gcagatgagc aggtgaacgt gcttttgtcg tatcgcgtga tggtggcgtc tggtctgccc
     3901 aaggcagcaa gctgtgcaag gtaaaaatcc tcattgatgc cgcccgccag gttaaccttc
     3961 gcatccagcc gttgctgacg ctggcgaagg gtctgcgtcc ctgccggaat acattcatcc
     4021 ggcaggccgc acagacgctc ccagcggttt atcagttcgg tggtggtgcg cggatccagc
     4081 tcctgcatca gggcatccgc acgctgatga acacgggtta atgacggtgc cgcaccggca
     4141 atcgccggat cgctggctga ccacgccgga ccgggcggca acagtgctga caacagacgg
     4201 atgtaatcat cgtttgtcac gtccatgaaa tcgcccccag aaccgccagt tcatttttcg
     4261 caatggtgat attgtccgcc ggtgcaagca actgatggct gtattccccg ttcgcaccgg
     4321 aaatcgcttc actgatacgt gacaccttca gttctccctg cggataacca tcacgcagca
     4381 ggaacgaacg caactccgcg gtgatggcag cccgtatttc cggtgtgtcc ggcgtcacac
     4441 ggatatgaaa atccaccgta tgtgccaccg gcctgaacac atacaaatca gagcctgcca
     4501 ccggggccag tggcccgata tgttgtcttg ccgccgtttc cgttgattct tccggaatgg
     4561 gattaatcag gtcactgctg gcaatcatca caccgacagt ccccgttccc atccagtgtc
     4621 ggtatgtcca tgcgcgggta atgccaggca cttctttagc ccagacgaca tagtccccgt
     4681 cagccccgcc ctgcggcgtc cagtaatacc gctcaatgac gcgggcgcgc cacgtttcca
     4741 gctcttcagt atcaaatccg cctgtcaggg tgtcagccac accggaagac ggcagaccat
     4801 tcaccggcgt gaccaggatt aatgccgtac cgtcgtcagc gttaccgacc gcacctgcac
     4861 ttgagcaggc gatcggcacg cgcaggacac caccggagct gattgcatcg tcagttgtcg
     4921 tgtactgcac caggtcatcg cgctgaataa cactcccggc agtcaccttc aggccatcgc
     4981 tgacaccttc ccagcgcata tacccgctgg caaccgtggc ccccttgcgc ggacaccgtt
     5041 tcatcgcagc atgtcgcgcc agccaggact catcgcacag gtcaggcagc atattcattg
     5101 ccagataatc gatgtaaccg tagaccgtat gcagcgccgc cgcatacacc tttgcccgca
     5161 cgtcttcatc catgcgccgg agcgtgtcgc tgacgtccag cctggcgaat aaatcgttac
     5221 ggagcatact gatattttct gccagcgtcg ggcgctgaaa ttcactgtcc gccatgcgtt
     5281 atcgcactcc acagatcatc aaaagaaatc attactggtc catcacgacg cctgagggtg
     5341 atactgttac ccagctcatt aatcccggtg cggcggatat ccagatcaat acgggacacc
     5401 acgccgtcat cagtcatcca ttgcaggcat tcgcggatat atccccttac cgtctgcacc
     5461 agctgattgg tcagtttgct gcgctgaagc aaccacagtc gggagccgta acggtcattc
     5521 tgtaccgcag gccaggtatc cccccaccat cccatcggga cgtcggcatt gtcatcaggc
     5581 tccgcccgcc gccaggtgaa cagggaaatc accacggcgc gggtcagcgg atccagcggt
     5641 gcgctggcgc aggtgcgttt accgttcacc gtcagccaca gttccatcat gcctccatcg
     5701 ctttatcagg tttgtcggtg ttactgccct gaccgttctc tctgtgacga tgcccgttat
     5761 aggcaagccg catcgctgac atggtggtgc cgccggagtc gcacaggtct ttcacctgtc
     5821 cggtcacttc cagatccatt tcaaaacgtg cttcaggtgc attgcgaaac gtgatcgttt
     5881 tccctgcacc gtccaccacg atcccctccc gggtcagcgt cacagactgc ccctgatcgt
     5941 catagacagc cacctcaccc gtttgcagcc ctttcaggcg gtagcgccgg tccgacaccg
     6001 taacaaccac cgcatgagaa cggtcgccat ccggaaacaa caccaccgct tccgcaccgc
     6061 tgtttgccct tgcggtaaaa ccgtagggtt caagatgttc aaccccggct ttgggttcac
     6121 cggcaatcag ggacacatcc acggtctgac atttcgtggc ggcactgatg cttttcacca
     6181 ctgcccgccc aatcaggccg agaagttgtc gctgcatggc ttcaatcgtc ctcatcagaa
     6241 c
//
LOCUS       DADMIB010000209         6106 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.211, whole genome shotgun sequence.
ACCESSION   DADMIB010000209 DADMIB010000000
VERSION     DADMIB010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6106
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.211"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..236)
                     /gene="yneK"
                     /locus_tag="JNZ89_003971"
     CDS             complement(<1..236)
                     /gene="yneK"
                     /locus_tag="JNZ89_003971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HAY8937673.1"
                     /translation="MVTPISISNYIFLPDDFPVRNIAPQVKEVLKNFIDALSTIICDE
                     EWRTSLNTNSATKKIFNNLDNLSYIQRTSFRGNDT"
     gene            complement(314..1195)
                     /locus_tag="JNZ89_003972"
     CDS             complement(314..1195)
                     /locus_tag="JNZ89_003972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8937674.1"
                     /translation="MDLTQLEMFNAVAEAGSITQAAAIVLRVPSNLTIRLRQLETELG
                     VDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAV
                     RIPATLAEFNHRYPKIQFSLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYR
                     EELMIVTPQGHAPVIRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESY
                     HGMLACVVAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLE
                     AFIQLLDVPDSAKQGYQ"
     gene            1296..2684
                     /gene="sad"
                     /locus_tag="JNZ89_003973"
     CDS             1296..2684
                     /gene="sad"
                     /locus_tag="JNZ89_003973"
                     /EC_number="1.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate-semialdehyde dehydrogenase"
                     /protein_id="HAY8937675.1"
                     /translation="MTITPATHAISINPATGEQLSVLPWAGANDIENALQLAAAGFRD
                     WRETNIDYRAEKLRGIGKALRARSEEMAQMITREMGKPINQARAEVAKSANLCDWYAE
                     HGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPIILAGNGYLLK
                     HAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMIKDSRIAAVTVTGSVRAGA
                     AIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFII
                     EEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEKTLAQGARLL
                     LGGEKMAGAGNYYPPTVLANVTPEMTAFREEMFGPVAAITVAKDAEHALELANDSEFG
                     LSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHE
                     FCNIQTVWKDRI"
     gene            2748..3674
                     /gene="glsB"
                     /locus_tag="JNZ89_003974"
     CDS             2748..3674
                     /gene="glsB"
                     /locus_tag="JNZ89_003974"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase B"
                     /protein_id="HAY8937676.1"
                     /translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA
                     ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV
                     QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS
                     EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKA
                     IHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
                     AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY"
     gene            3674..4033
                     /locus_tag="JNZ89_003975"
     CDS             3674..4033
                     /locus_tag="JNZ89_003975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HAY8937677.1"
                     /translation="MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAAD
                     FVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQR
                     YIVAVIYHWLVVQMNQP"
     gene            4172..5590
                     /locus_tag="JNZ89_003976"
     CDS             4172..5590
                     /locus_tag="JNZ89_003976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY8937678.1"
                     /translation="MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIVAELRLVHEL
                     SLFWPLNGVMAGVFARYVWLNRLHYYAISYVAMLVYDAITTEWGLVSLVINFSNMMFI
                     VTVALLVVRDKRLGKNKYEPVSALRLFNYCLIAALLCAIVGAIGSVSIDSLDFWPLLA
                     DWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAF
                     PLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPEMFSARLGIA
                     TMAICPIMVSFSVAAINSLMKQVARRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTV
                     MLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNP
                     VDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTC
                     LYRSKKDGRNRTSTMRYGEEVV"
     gene            5817..6056
                     /locus_tag="JNZ89_003977"
                     /pseudo
     CDS             5817..6056
                     /locus_tag="JNZ89_003977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310155.1"
                     /note="catalyzes the formation of D-tagaturonate from
                     D-altronate; incomplete; partial in the middle of a
                     contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tagaturonate reductase"
BASE COUNT         1455 a         1405 c         1636 g         1610 t
ORIGIN      
        1 gtgtcgttac cccgaaaaga agtcctctga atatatgata agttatcaag gttgttaaat
       61 atcttttttg tggctgagtt ggtgtttaaa gacgtgcgcc actcttcatc acatattatg
      121 gtactgagtg catcaataaa attctttaaa acttctttta cctgaggtgc aatattacgt
      181 acgggaaaat catcaggaag aaatatgtaa ttactgatgc ttattggcgt aaccatattt
      241 gccccatata gtcataagtc atcggaacat cactatatag ggcatttgag ctgcaagaac
      301 tatcaaaaat agctcattgg taaccctgtt ttgccgagtc aggcacatcc agtagttgaa
      361 taaatgcctc aagcggacgc gttttcgcac cacgacgcca gaccagccag gttgttaacc
      421 aacgccattg ctcagctaac ggccacgctt caacctggtg atgccccggc atactttcca
      481 gcatagagcg tggaataagc gcaatgcctg ctcctgcgac cacacaggcc aacatcccgt
      541 gatacgactc catctcgtga atagttcccg gagcggcacc gtcagcatga aaccagctct
      601 cgaagtggcg acgatacgaa caattggcgc ggaaggcata aatgttactg ccgttaacct
      661 gactggcgcg gattactggc gcatgacctt gtggcgtgac gatcatcagc tcctcgcggt
      721 ataccggtat cccgtcaatg gcagtatggt taatgggccc atcaataaat gccgcattca
      781 gttttccctc cagcactcct tccagcatag tgccggaagg gccggtggaa agtgaaaact
      841 gaattttggg ataacgatgg ttgaattccg ccagcgtggc cggaatgcgc actgctgcgg
      901 tgctttccag cgaaccaaga gaaaataaac cttgcggctc atcgccagcg acaacgctcc
      961 gcgcttcatc cactaacgcg agaatttgtt ggctatagcg taaaaagtta tgcccggcag
     1021 gagagagacg taaacgctga ttctcgcgaa taaacagatc tacccccagt tctgtttcca
     1081 gctggcgtag acggatagtg agattcgacg gcacgcgaag cactattgct gctgcctggg
     1141 ttatgctgcc agcttcggca accgcgttga acatctccag ttgggtcaga tccataatat
     1201 tctcgattcg tgaataagtg gcttaatatt attcatttta aagcaagagt aaatctgcgt
     1261 atcttcatac catgactcat aaaggagata ccccgatgac cattactccg gcaactcatg
     1321 caatttcgat aaatcctgcc acgggtgaac aactttctgt gctgccgtgg gctggcgcta
     1381 acgatatcga aaacgcactt cagctggcgg cagcaggctt tcgcgactgg cgcgagacaa
     1441 atatagatta tcgtgctgaa aaactgcgtg gtatcggtaa ggctctgcgc gcccgtagcg
     1501 aagaaatggc gcaaatgatc acccgtgaaa tgggcaaacc aatcaatcag gcgcgcgctg
     1561 aagtggcgaa atcggcgaat ttgtgtgact ggtatgcaga acatggtccg gcaatgctga
     1621 aggcggaacc tacgctggtg gaaaatcagc aggcagttat tgagtatcga ccgttgggga
     1681 cgattctggc gattatgccg tggaactttc cgttatggca ggtgatgcgt ggcgcggttc
     1741 ccatcattct tgcaggtaac ggctacttac ttaaacatgc gccgaatgtg atgggctgtg
     1801 ctcagctcat tgcccaggtg tttaaagatg cgggaatccc gcaaggcgta tatggctggc
     1861 tgaatgccga caacgacggt gtcagtcaaa tgattaaaga ttcgcgcatt gctgctgtca
     1921 cggtgaccgg aagtgttcgt gcgggagcgg ctattggcgc acaggctgga gcggcactga
     1981 aaaaatgcgt actggaactg ggcggttcgg atccatttat tgtgcttaac gatgccgatc
     2041 tggaactggc ggttaaagcg gcggtagccg gacgttatca gaataccgga caggtttgtg
     2101 cagcggcaaa acgctttatt atcgaagagg gaattgcttc tgcatttacc gaacgttttg
     2161 tggcagctgc ggcagccttg aaaatgggcg atccccgtga tgaagagaac gctctcggac
     2221 caatggctcg ttttgattta cgtgatgagc tgcatcatca ggtggagaaa accctggcgc
     2281 agggtgcgcg tttgttactg ggcggggaaa agatggctgg ggcaggtaac tactatccgc
     2341 caacggttct ggcgaatgtt accccagaaa tgaccgcgtt tcgggaagaa atgtttggcc
     2401 ctgttgcggc aatcaccgtt gcgaaagatg cagaacatgc gctggaactg gctaatgata
     2461 gtgagttcgg cctttcagcg accattttta ccaccgacga aacacaggcc agacagatgg
     2521 cggcacgtct ggaatgcggt ggggtgttta tcaatggtta ttgtgccagc gacgcgcgag
     2581 tggcctttgg tggcgtgaaa aagagtggct ttggtcgtga gctttcccat ttcggcttac
     2641 acgaattctg taatatccag acggtgtgga aagaccggat ctgacgcgac atattcagct
     2701 ctgatatact cgcaggtctt ttcagacctg cggtccagga gtagaaagtg gcagtcgcca
     2761 tggataatgc aattttagaa aacatcttgc ggcaagtgcg gccgctcatt ggtcagggta
     2821 aagtcgcgga ttatattccg gcgctggcta cagtagacgg ttcccgattg ggcattgcta
     2881 tctgtaccgt tgacggacag ctttttcagg ccggagacgc gcaagaacgt ttttccattc
     2941 agtctatttc caaagtgctg agtctcgttg tcgccatgcg tcattactcc gaagaggaaa
     3001 tctggcaacg cgtcggcaaa gatccgtctg gatcaccgtt caattcttta gtgcaactgg
     3061 aaatggagca gggtattccg cgtaatccgt ttattaatgc tggtgcgctg gtggtctgcg
     3121 atatgttgca agggcgatta agcgcaccac ggcaacgtat gctggaagtc gtgcgcggct
     3181 taagcggtgt gtctgatatt tcatacgata cggtggtagc gcgttccgaa tttgaacatt
     3241 ccgcgcgaaa tgcggctatc gcctggctga tgaagtcgtt tggcaatttc catcatgacg
     3301 tgacaaccgt tctgcaaaac tactttcatt actgcgctct gaaaatgagc tgtgtagagc
     3361 tggcccggac gtttgtcttt ctggctaatc aggggaaagc tattcatatt gatgaacctg
     3421 tggtgacgcc aatgcaggcg cggcaaatta acgcgctgat ggcgaccagt ggtatgtacc
     3481 agaacgcggg ggagtttgcc tggcgggtgg ggctaccggc gaaatctggc gttggtggcg
     3541 gtattgtggc gattgttccg catgaaatgg ccatcgctgt ctggagtccg gaactggatg
     3601 atgcaggtaa ctcgcttgcg ggtatcgccg tccttgaaca attgacgaaa cagttagggc
     3661 gttcggttta ttaatgcagt ctctcgatcc actcttcgcg cgtttatccc gttcaaaatt
     3721 tcgctctcgc tttcgtctgg gcatgaaaga gcgtcagtat tgcctggaga aaggcgcgcc
     3781 agtcatcgaa caacatgcgg cggattttgt cgctaaacgt cttgctccgg cattaccggc
     3841 taatgacggt aagcaaacac ccatgcgcgg gcatccggtg tttatcgctc agcacgccac
     3901 cgcgacctgc tgtcgcggtt gtctggctaa gtggcataac attccgcagg gtgtttcgtt
     3961 aagcgaagaa caacaacgtt atatcgtggc ggtaatctat cactggctgg ttgtacagat
     4021 gaatcagcca tgagaattgc ggaaaacgat aaaatagcat tcccagggta cctttatttg
     4081 ccgccgctgt tagcgaacat gctatccttt atgagaattt acttattacg ttgagataat
     4141 tgccacccgc aattgtatgg acagataatt aatgcatgta caccccattt caactttccg
     4201 tttgttccag gaaggtcatc tgctacgtaa tagcatcgct atttttgcgc taaccacgct
     4261 gttctatttt attgttgcag agttacggct ggttcacgaa ctttctcttt tctggccgct
     4321 gaatggcgta atggcggggg tgtttgcccg ctatgtctgg cttaatcgac tgcattacta
     4381 tgcgatcagt tatgtggcga tgctggttta tgatgccata accaccgaat ggggactggt
     4441 ttcactggtt atcaatttct ccaatatgat gtttattgtt accgtcgcct tactggtcgt
     4501 gcgggataag cgtctgggga aaaataagta tgagccagta agtgccttac ggctatttaa
     4561 ttactgtctg attgccgcat tattatgcgc tattgtcggg gcgattggtt cggtcagtat
     4621 tgatagtctg gatttctggc ctttgcttgc ggactggttc agtgagcaat tctcaacggg
     4681 cgtgttgatc gtgccttgta tgctgacgtt ggctattcct ggagtgctgc cgcgctttaa
     4741 agcagaacag atgatgcccg ccatcgcgct tattgtgtcg gttattgcct cggtagtcat
     4801 tggcggagcg gggagtctgg cgttcccgct gcctgcatta atctggtgtg cagtgcgcta
     4861 tacgccgcag gtaacatgtc tgttgacctt tgtcaccggt gcggtggaaa tcgtactggt
     4921 ggcaaattcg gtgattgata tctcggtcgg ttcgccgttc tccattccgg aaatgttctc
     4981 cgcacgtctc ggtattgcca cgatggcgat atgcccaatt atggtttctt ttagcgtggc
     5041 agcgatcaat tcgctaatga agcaagttgc gcggcgagcc gactttgatt ttctgactca
     5101 ggtttactca cggtccggtc tttatgaggc gctgaaaagt ccatcgctga aacagacaca
     5161 acatctgacg gtcatgctgc ttgatatcga ctatttcaaa agcattaacg ataactatgg
     5221 acatgaatgt ggcgataaag tgttaagcgt gtttgcccgg catattcaga agattgtcgg
     5281 tgataagggg ctggtggcgc gcatgggcgg cgaagaattt gctgttgcag tgccgtcggt
     5341 gaatcctgtc gatggtctgc taatggcgga aaaaatccgt aaaggcgttg aactgcaacc
     5401 attcacctgg caacaaaaaa cgctttatct cacggtaagt attggcgtcg gtagtggtcg
     5461 cgcatcgtac cgaacgctga ccgatgattt taataaattg atggtcgaag ccgatacgtg
     5521 tctgtatcgc tcgaagaaag atgggcgcaa ccgtaccagc actatgcgtt acggtgagga
     5581 agttgtctga catctttatt cattccgcgc gatttgaatg caatgtgttc taccacttta
     5641 tgatccagga aaaggcgtat ttcctcgatt aaaccatgat ccgcgccaca cttttctcat
     5701 aaaactgctc attaatcatc aggagttgat caaaacaggg gttcggcgta ttaaattttg
     5761 ctaacctgtc gtaccaattc agacgggttg tatgactaat cagaagggaa cccattgtga
     5821 aaacactaaa tcgtcgcgat attcccggtg cacagtatcc agaacgtatc attcagtttg
     5881 gtgaaggtaa cttcctgcgc gcctttgttg actggcaaat cgatctcctg aatgagcaca
     5941 ccgatctgaa ttctggcgtg gtcgttgttc gtccgattga aacttcattc ccgccgtcac
     6001 tgagcacgca ggatggtctg tacaccacca ttatccgtgg cctgaatgag aaggggtgaa
     6061 gtggtcaaca aaaactggcc accgagttag agtttttcca gtatcg
//
LOCUS       DADMIB010000210         6101 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.212, whole genome shotgun sequence.
ACCESSION   DADMIB010000210 DADMIB010000000
VERSION     DADMIB010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6101
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.212"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            739..2592
                     /locus_tag="JNZ89_003978"
     CDS             739..2592
                     /locus_tag="JNZ89_003978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY8937679.1"
                     /translation="MAFKHYDVVRAASPSDLAKQLTQKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGDVVVSGATEPEWYYVIVLAGQSNAMAYGEGLPLPDSYDAPHPRIKQLARRN
                     TVTPGGEVCVFNDIIPADHCLHDVQDMSTINHPRADLSKGQYGCVGQGLHIAKKLLPY
                     IPNNAGILLVPCCRGGSAFTQGTEGTFSESTGASQDSARWGVGKPLYQDLLFRTKAAL
                     QKNPKNVLLAICWMQGEFDMTNASYAQQPAAFLAMVQQFRADLAGLAAQCHGGSPASV
                     PWICGDTTYAWKQEHGTQYEVVYGAYKGKESQQIYFVPFMTDGSGVNTPTNNPSEDPD
                     IAGSGYYGSASRTNKNWVSSNRPTHFSSWARRGIIPDRMATAILNVAGRTLAFISGKA
                     PEIKPSPGGDTPSGPSEDASVRTISLLPTAGDAAAQGWSIKNGGIQLSDGVFKITKQS
                     NKAWSLTRPVDDAVSLLTRGGRLSCKFRLSGALTNNQFGLGIYLYTDVALPDVVAMTG
                     TGNPFLMSFFTQTTDGKLNLMHHKKAGNTKLGEFGNYSNDWQTLELVFTAGSATVTPK
                     LNGVAGPAFQVIKDSLTVGLNALTLTDITKNATYGVEIESLVLEINAPASS"
     gene            2742..2957
                     /locus_tag="JNZ89_003979"
     CDS             2742..2957
                     /locus_tag="JNZ89_003979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY8937680.1"
                     /translation="MYQMEKITTGVSYTTSAVGTGYWFLQLLDRFSPSQWAAIGVLGS
                     LLFGLLTYLTNLYFKIREDRRKAARGE"
     gene            2962..3306
                     /locus_tag="JNZ89_003980"
     CDS             2962..3306
                     /locus_tag="JNZ89_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HAY8937681.1"
                     /translation="MKKKYELVVKGINNYPNKITVTVALEIGGYPSLLLPDVAISLDR
                     TEDATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPG
                     IITGSLKTPPLA"
     gene            3357..3890
                     /locus_tag="JNZ89_003981"
     CDS             3357..3890
                     /locus_tag="JNZ89_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY8937682.1"
                     /translation="MNTKIKYGLSAAVLALIAAGAPAPEILDQFLDEKEGNHTTAYRD
                     GAGIWTICRGAILVDSKPVVPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQK
                     AGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VSRRDQESALACWDIDR"
     gene            4046..4228
                     /locus_tag="JNZ89_003982"
     CDS             4046..4228
                     /locus_tag="JNZ89_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310767.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937683.1"
                     /translation="MAKYKRILLRLTMKNGLELKAPVTDDISRALAFAIKWVAVGVAV
                     SPMLYGLAKLVIALKS"
     gene            4386..4560
                     /locus_tag="JNZ89_003983"
                     /pseudo
     CDS             4386..4560
                     /locus_tag="JNZ89_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001371701.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
     gene            4793..5017
                     /locus_tag="JNZ89_003984"
     CDS             4793..5017
                     /locus_tag="JNZ89_003984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937684.1"
                     /translation="MKKLLVTVKPFQGTIPFRILQRGRVLVEGSFSGKCTQLHSRTFQ
                     VNATNEELTVECTMNAAKCRMVSAALQPVC"
     gene            5362..5688
                     /locus_tag="JNZ89_003985"
     CDS             5362..5688
                     /locus_tag="JNZ89_003985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000828066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HAY8937685.1"
                     /translation="MKRNLPLIILLSSLVMGCTQHKTDMPRQLVKALPQYPAYAAANY
                     IKGRVDVKFDIGADGTVTRIEFIRSEPHHLFDEQVVKAMAKWRFEKDRPCKGVKKTFI
                     FSPSAP"
     gene            complement(5820..6020)
                     /locus_tag="JNZ89_003986"
     CDS             complement(5820..6020)
                     /locus_tag="JNZ89_003986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000095744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3950 domain-containing protein"
                     /protein_id="HAY8937686.1"
                     /translation="MSSKNRTRRTTTRNIRFPNQMIEQINIALDLKGSGNFSAWVIEA
                     CRRRLATDATHLRPASMKNNEK"
BASE COUNT         1519 a         1408 c         1675 g         1499 t
ORIGIN      
        1 cccctctccg gaggggcttt tctgtgccgg atacatcaca gtttctggaa ccttaggtac
       61 tacagtatca gtcagggtgc tatattttca gatgtgatga aagcctgtca gcaggcaggg
      121 cgtatcggaa atgacccagt agagaaaacg ttgactcaga taccggtgct gagttaccgg
      181 gaaaccggca tcacatgacc gctatccttc caggcccatc cgctccggtg ggccttttta
      241 ctgcagaaaa caggttcccc gttaaatgct atgttgctca caattcagta agttgacagt
      301 tgcctgtcag actgggcatt tgttaaaaaa atttcgcatg gtgaatcccc ctgagcggag
      361 gggcgactgg tgacggtata atctctgatt atcaaaacga gaatgacgcg ggtttagtgg
      421 caccgggctg aactcaccgg gaggcacccg gcaccatgtg catgatgata cagatacgcg
      481 gctttagccc ctctccggag gggctttctt atggacaaaa aaagcccgcg ctgggagacg
      541 cgggcggcaa ggaataaaca ataaaacgtg aagtaatatt tcagctggcg aataataccc
      601 catagtaatc actctgcgca actgcgcggt ctttttcgaa ttgcgggctg tagtctccct
      661 tctgccattg tcctgtaact tccggacttc agcctgctcc ttatctgact cacaacatta
      721 tcccgcccgg gaggattcat ggcatttaaa cactatgacg tggtcagggc ggcatcgccg
      781 tcagaccttg cgaaacaact gacacaaaaa ctgaaggagg gctggcagcc gtttggtagt
      841 ccggtggcca taacccctta taccctgatg caggcgattg cagcagaagg tgatgtggtc
      901 gtcagtggtg caactgagcc ggagtggtac tacgtcatcg tactggccgg gcaatccaat
      961 gccatggctt acggtgaagg gcttccgctt ccggattcat acgatgcgcc ccatccgcgc
     1021 attaagcaac tggcccgtcg taacacagtg actcccggtg gtgaagtatg cgtatttaac
     1081 gacatcattc ctgctgacca ttgtctgcat gatgttcagg atatgagtac gattaaccat
     1141 ccccgggctg acctgagcaa agggcagtac ggctgtgtcg gacagggctt acatattgcc
     1201 aaaaaactgc ttccgtatat ccctaataat gcggggatcc tgctggtacc atgctgtcgt
     1261 ggtggttcgg cattcaccca gggcacggag gggacattca gcgagtccac gggagccagt
     1321 caggattcgg ctcgctgggg agtgggtaag ccgttatatc aggatctgct tttccgcacg
     1381 aaggcagcat tgcagaaaaa cccgaaaaac gttttgctgg cgatatgctg gatgcagggg
     1441 gaattcgata tgacgaatgc cagttacgcc cagcagccag cagcatttct tgcaatggta
     1501 cagcagttcc gtgctgacct tgccgggctg gcagcgcagt gtcacggtgg aagtccggca
     1561 tcagtcccct ggatttgtgg cgacacgaca tacgcgtgga aacaagaaca cggtacgcaa
     1621 tatgaagtgg tatatggtgc atataaaggt aaagaatccc agcagattta ttttgttccc
     1681 tttatgaccg atggtagcgg agttaataca ccgacaaaca acccgtcaga agatcctgat
     1741 attgccgggt ctggttatta cggttcggca tcccgaacga acaaaaactg ggtatcatca
     1801 aatcgcccga cgcatttcag ctcatgggcg cgtcgtggca ttattcccga tcgtatggca
     1861 actgctattc tgaacgtagc cggtcgcacc ttagccttca ttagtggtaa ggcaccggaa
     1921 atcaaaccct cgcccggcgg cgacacgcca tcggggccgt ctgaagatgc atccgtacgc
     1981 acaatctccc tgttgccgac agccggagat gctgctgcgc agggctggag cattaagaat
     2041 ggcggaattc agttgtcaga tggtgtattt aagatcacca agcagagcaa taaagcctgg
     2101 tccctgacgc gcccggtgga tgacgcagtc tccctgctga cacggggtgg cagactgagc
     2161 tgtaagtttc gactgtcagg cgcactgacc aacaaccagt tcggtctggg aatttatctg
     2221 tataccgatg tagcgttacc tgacgtcgtg gcgatgaccg ggactggtaa cccgttcctg
     2281 atgtcgttct tcacccagac cacagacggc aaactgaatc tgatgcatca caagaaagcc
     2341 ggaaacacaa agttgggcga gttcgggaat tacagtaacg actggcagac gctggagctg
     2401 gtgttcaccg ccggcagtgc cacggttact ccgaaactga atggagtggc tggcccggca
     2461 ttccaggtca taaaagacag tctgacagtg ggactaaatg cactgacgct gacggatatt
     2521 accaaaaatg caacgtatgg cgttgagata gaaagtctgg tgctggagat aaatgcaccg
     2581 gcatcatcat aaaaagtgag ccagtcaaat ggaaggtatc gttaaactca ccggtagtgt
     2641 cagtgggtcg tctgagacgc ctgcatgagt tatcagagcc atcagtactt aactggtggc
     2701 ttttttattg ttgtcagctt ccggataacg ggagacgggg tatgtaccag atggaaaaaa
     2761 tcacaacagg tgtgtcatac accacgtcag cggtgggaac gggctactgg ttcctgcagt
     2821 tgctggacag gttttccccg tctcagtggg cggcaatagg cgtgctgggg agtctgttgt
     2881 ttgggctgct gacatatctg actaacctgt atttcaaaat cagagaggac cgtcgtaagg
     2941 cggcgcgggg agagtaaagc gatgaagaaa aaatacgaac tggttgttaa agggataaat
     3001 aattacccga ataagattac tgttactgtg gcactggaaa ttggtgggta tccgtcactg
     3061 ttgttgccag atgtggcgat tagtcttgac cgtactgaag atgccacgct ggagttttac
     3121 gaagctgagg cgaaaaagca ggcgaagcag tttttcatgg atgttgctgc cgggttatgt
     3181 gaaggggatg gtccgttgcc ggaaaagcgc cccgtaattt tagaggcgca ggatgtgttg
     3241 ataacctaca gaggaaaact accgggaata attactggtt ctctgaagac tccaccgctg
     3301 gcctgaagac ttaacatatc cagggatttg aaatcgataa accctgataa atatccatga
     3361 acaccaaaat caaatacggc ctgtcggctg ccgttctggc gctgattgcc gcaggtgcgc
     3421 ctgcgcctga aatcctcgac cagtttctgg atgaaaagga aggtaaccac accacggcat
     3481 accgtgatgg cgcgggtatc tggaccatct gccgcggtgc catcctggtg gatagtaaac
     3541 ctgtcgtccc gggcatgaag ttgtcgaagg aaaaatgcga ccaggtcaac gccattgagc
     3601 gtgataaggc gctggcatgg gtggagcgca atattaaagt gccgctgacc gaaccccaga
     3661 aagcgggtat cgcgtcattt tgtccctata acattggccc cggtaagtgt ttcccgtcga
     3721 cgttttacag acggattaat gctggtgacc gcaggggagc atgcgaagcg attcgctggt
     3781 ggattaagga cggtggcaga gactgccgta tccgctcaaa taattgctac ggtcaggtat
     3841 cccggcgaga ccaggaaagt gcgctggcgt gctgggacat cgacagataa gcagaatatt
     3901 ttgctgaaaa taaggcatga gcacgcggac ggataacacg aaatcctgcg aactggcgaa
     3961 acgtaagtga ataaaagtaa aaaccccgtt tgttggcacc aggcggggtt ttgtgtttct
     4021 gaccttgagt aaggcaaggg agaacatggc gaagtataaa cgaattctgt tgaggttgac
     4081 catgaaaaac ggccttgaac tgaaagcgcc tgtaactgat gacatcagca gagcactggc
     4141 ttttgccatt aagtgggtgg cggtcggtgt tgctgtgtcc ccgatgctgt atgggctggc
     4201 aaaactggtc attgcgttga aatcgtgaag ggaggattaa gcatgtcaga caaactcata
     4261 acgctggcga agatcctctg tgtaattgtc ggcatttcat tttcactaat gctggttgct
     4321 ctttttcttt ccatggcctg gatgatgttg tcttcgtcgg ggctgctggg gtgaacataa
     4381 accgaatgct ttccgcgttt accgttattc tgctggtggt ctgtggtgcg ctgtggctgg
     4441 caacagacca ttaccgtgat aacgccatca cctacaaagc gcagcgcgat aaaaaagcca
     4501 gagagctgga gctggcaaac gcaaccatta ctgacatgca gcagcgccag cgtgatgttg
     4561 ccgctggtcg taagcgcctg cggatcaacg ccacctgctc cggtaccgtg cgtgaagcca
     4621 ccggcacctc cggaatggat aatgcaaccg gcccccgact ggcagacacc gctgaacggg
     4681 attatttcac cctcagagag cggttgatga caatgcagaa gcaactggaa ggggcgcagg
     4741 aatatatccg cactcagtgt attaactagt atttttgtta tccggagaat gcatgaagaa
     4801 attactggta accgtaaagc cttttcaggg aacaattccg ttccgtattt tgcagcgtgg
     4861 tcgtgttctt gttgaaggtt cgttcagtgg taaatgtacg caattacact cccggacctt
     4921 tcaggtgaat gccacgaatg aagagctaac cgttgagtgt acgatgaatg ccgctaaatg
     4981 ccgcatggta tccgctgcat tacagccagt gtgttgagcg accttattaa ccatgcgcgg
     5041 tattgtcgcc gtatccccgc attaacagag accgcagccc gaccgggaga ctcctctgcg
     5101 cgagtgtgcg gggataatca aaaacgatac acaccggggt ttaccgcgtt aacggagcgc
     5161 ggcgttgtcc cctcatggtc gctggtccgg tgcgatggtg gaagaaaccg gacgatgtgt
     5221 tacctcgcaa gctctgttat gtcatgtgtc tgatttgtga tttaagtcgg ataattgtcg
     5281 ttgccattaa gcagaggatt gatgaccgac agggtggcat tgttagaata agacttattc
     5341 ttatctgtgc cgggaatgaa aatgaaaaga aaccttccgt taattatttt gttgtcttct
     5401 ctggttatgg gctgtacgca acataaaaca gatatgcccc gacagttggt taaggcatta
     5461 ccacaatatc cggcctatgc agcggcaaat tatataaagg gacgggttga tgtgaagttt
     5521 gatattggtg ctgatggtac tgtcacccga attgagttta tccgttcaga gccgcaccat
     5581 ttgtttgatg agcaggttgt aaaggcgatg gcaaaatggc gatttgagaa ggacaggccg
     5641 tgtaaaggcg tgaagaaaac gtttatcttt agtccttctg caccctgatt atttcatcag
     5701 aaattaatta tcactctgtt gttattctgt acatcccggc agggtaagtc ttgttccgtc
     5761 ggatatgaag atgaaatatt gttggaggac agtgggtacc tgctcctgta accgaacgtt
     5821 catttctcgt tatttttcat gctggccggg cgcagatgcg ttgcatctgt tgccagcctt
     5881 ctcctgcagg cttcaataac ccacgctgaa aagtttcctg aacctttcag atcaagagcg
     5941 atgttaattt gttcaatcat ctggtttgga aatcggatgt tgcgggttgt tgttctgcgg
     6001 gttctgttct ttgatgacat aatgtttccc catattcagt gttgctgatt tgtattatct
     6061 gaagttgctt ttacgttaat ttgatgcaga tcaatcaata c
//
LOCUS       DADMIB010000211         6084 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.213, whole genome shotgun sequence.
ACCESSION   DADMIB010000211 DADMIB010000000
VERSION     DADMIB010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6084
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.213"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(7..588)
                     /locus_tag="JNZ89_003987"
     CDS             complement(7..588)
                     /locus_tag="JNZ89_003987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000291745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937687.1"
                     /translation="MYYPVTDYIALALIISFLFLTLFICLLCLKHERIKKETIRQKNA
                     HILEHGWNATEFSWFRYGQYNETGIYISIEKTIIITITVSGGCFKKEYSIVSHMLVTD
                     TITEATLYENGLYTRHIRLSRPVSDSKYPLPPGSQLIKNMTLRLRLQDQQEETSVTLF
                     QGKMSTDGNNYYIIKGKVSSVLLLLKMLQINHA"
     gene            complement(635..4492)
                     /gene="sigA"
                     /locus_tag="JNZ89_003988"
     CDS             complement(635..4492)
                     /gene="sigA"
                     /locus_tag="JNZ89_003988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease autotransporter toxin SigA"
                     /protein_id="HAY8937688.1"
                     /translation="MNKIYSLKYSHITGGLVAVSELTRKVSVGTSRKKVILGIILSSI
                     YGSYGETAFAAMLDINNIWTRDYLDLAQNRGEFRPGATNVQLMMKDGKIFHFPELPVP
                     DFSAVSNKGATTSIGGAYSVTATHNGTQHHAITTQSWDQTAYKASNRVSSGDFSVHRL
                     NKFVVETTGVTESADFSLSPEDAMKRYGVNYNGKEQIIGFRAGAGTTSTILNGKQYLF
                     GQNYNPDLLSASLFNLDWKNKSYIYTNRTPFKNSPIFGDSGSGSYLYDKEQQKWVFHG
                     VTSTVGFISSTNIAWTNYSLFNNILVNNLKKNFTNTMQLDGKKQELSSIIKDKDLSVS
                     GGGELTLKQDTDLGIGGLIFDKNQTYKVYGKDKSYKGAGIDIDNNTTVEWNVKGVAGD
                     NLHKIGSGTLDVKIAQGNNLKIGNGTVILSAEKAFNKIYMAGGKGTVKINAKDALSES
                     GNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGTTVTNSNVKQSTLSLTNTDAYMYHGN
                     VSGNISINHIINTTQQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKEGN
                     NNCPIPFLCQKDYSAAIKDQESTVNKRYNTEYKSNNQIASFSQPDWESRKFNFRKLNL
                     ENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRNITGEGFGFRQQLRSGDSA
                     GESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIINKGATVTAQGKMYVDKAIE
                     LAGTLTLTGTPTENNKYSPAIYMSDGYNMTEDGATLKAQNYAWVNGNIKSDKKASILF
                     GVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAASASMYNTLWRVNGQSALQS
                     LKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQSVNQSDKLIVKNQLTGS
                     NNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFSNISPVISTKEDQEH
                     TTWTLTGYKVAENTASSSAAKSYMSGNYKAFLTEVNNLNKRMGDLRDTNGEVGAWARI
                     MSGAGSASGGYSDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASSNAFSGKTKSV
                     GAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGAEAGYRYHV
                     TEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKSFSGKDW
                     KVTARAGLGYQFDLFANGETVLRDASGEKRIKGEKDGRILMNVGLNAEIRDNLRFGLE
                     FEKSAFGKYNVDNAINANFRYSF"
     gene            complement(4853..5890)
                     /locus_tag="JNZ89_003989"
     CDS             complement(4853..5890)
                     /locus_tag="JNZ89_003989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001363149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HAY8937689.1"
                     /translation="MHRGFCVAHEPSILLPSVGAQLSNPDNITDNADRISDEWKAFDR
                     AIESNHGVPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSV
                     DGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATELETAGQKWS
                     LGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTNLDDNWTLGLV
                     AQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNR
                     QFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNT
                     YGAVAQFQFTF"
     gene            5842..6084
                     /locus_tag="JNZ89_003990"
                     /pseudo
     CDS             5842..6084
                     /locus_tag="JNZ89_003990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1514 a         1356 c         1362 g         1852 t
ORIGIN      
        1 cagagatcag gcgtgattaa tctgcagcat ttttaataac agaagtactg agcttacttt
       61 acctttgatg atgtaatagt tatttccgtc ggtactcatt tttccctgaa ataatgtcac
      121 ggatgtttct tcctgctgat cctgcaggcg cagtcgtaag gtcatatttt taatgagctg
      181 agatccgggt ggcaaggggt atttgctgtc agatactggg cgactgagtc tgatgtggcg
      241 cgtatacagc ccgttttcgt acagggtggc ctctgttatg gtgtcagtga ccagcatgtg
      301 ggagacaatg ctgtattctt ttttaaagca cccaccagaa acggtgattg taatgataat
      361 ggtcttctcg atcgagatgt aaatacccgt ttcgttatac tgtccgtatc ggaaccatga
      421 gaactcagtt gcattccagc catgctccag aatatgtgca tttttttgcc tgatagtttc
      481 tttttttatt cgctcatgtt taaggcataa caggcagata aataatgtca gaaaaagaaa
      541 gctaataatg agagcaagag cgatatagtc tgtcacaggg taatacatat tctctccggt
      601 agaagaaggg ccgcaaacgc ggcccgggct gttatcagaa agagtaacgg aagttggcgt
      661 tgatcgcgtt atccacgttg tatttaccaa atgccgattt ctcaaactca agaccaaagc
      721 gaagattatc gcgaatttcg gcgttgagac caacattcat gagaatacga ccgtcttttt
      781 cacctttgat acgtttctca ccggacgcat cacgcagtac ggtttcaccg ttggcaaaca
      841 ggtcaaactg gtagccaagg ccggcgcggg ctgtgacttt ccagtcctta ccggagaagg
      901 atttacccac atcaacaccg gtacgcccaa tcagcggatt aaagtcctta tccttcatgg
      961 tcacgctcat tccgcgatcc tgccagtcga accgtttacc tgatacggcc ccataaacca
     1021 gttctgcctg cggctcaatc caggagtctt ctgttacatg atagcggtag cctgcttcag
     1081 cacccacata caaggaatga gaactgtagt cttttgttcc gagcccagca aaggtcgccg
     1141 agtactcatt atcatggtga acatacttac taatcaggtc gatataggca ccagagtcaa
     1201 atatagcgga agcatacaga cctgccccga cggacttcgt cttgccactg aatgcattac
     1261 tgctggcatg actgtcggta tacgtcatag tcagaccagt gaaaaggtca agtccatcca
     1321 gctcatgttt tttatccaca ccaatctgca catgggtgta gttgtcactg tatccaccag
     1381 aagctgaacc tgctccgctc atgatgcggg cccatgcacc gacctcgcca ttggtgtcac
     1441 gcagatcccc cattcgttta ttcaggttgt tgacttctgt caggaaggct ttgtaattac
     1501 cggacatata cgattttgct gcactggaag atgctgtatt ttcagccacc ttatatccgg
     1561 tcagggtcca cgtggtatgt tcctgatcct ctttcgtgct gatcacagga gatatgttgc
     1621 tgaaacctat ggcctgagta ctggctttaa atatctcttt attgcttcct tttggggctg
     1681 ttatcaggtc aacgtttaat cctgagttat tatttcccac tttctgtata tcgaccgaca
     1741 gactgttatt gcttccggtt aactgatttt taacaatgag tttatccgat tgatttacag
     1801 actggctcag atcagcccgc ataatcacag cagtattagt ggcatccagt gtgtttactg
     1861 tcacagtatg gaaacccgaa ttctctatgt tactaaacaa caaaagactg tcgcgggttt
     1921 ttaatgattg cagggctgac tgtccgttta ctctccataa ggtgttatac atgctggctg
     1981 aggcagcagg agcatcaata cctccggtat aagaagtatc aaagccaccc agcaaacctg
     2041 tagccagcgg tgtgtgtgtg gttttgtcca ggttatcttc tttatactgg tcaacaccaa
     2101 acagaataga tgcttttttg tctgatttta tattaccatt gacccaggca taattttgag
     2161 cctttaacgt ggcaccatct tctgtcatat tatatccatc tgacatatag attgccgggc
     2221 tgtatttatt attttctgta ggggtgcctg ttaatgtcag ggttccggcc agttcaatag
     2281 ctttatctac atacattttt ccctgggcgg taacagtagc tcctttgttg ataatcaggt
     2341 ctgtattaat taaggataat gcaccagtca tagtaacagt tgatttatca ccaacagtta
     2401 ttttgctgtt ttgagcactc agactgccgt tgaaactact ttcgcctgct gaatccccgg
     2461 agcgaagctg ttgtctgaat ccaaaacctt cgccagtaat gtttcttcct gagaacatgt
     2521 caatgtatgc agttttattt cccagaacaa tttgagagtt tttagcctct atgtgtcctt
     2581 ttacattagc atcccggcct atactcaggg ttgcgttttc taaatttaat ttccggaaat
     2641 taaatttacg actttcccag tcgggctggg aaaaagaggc tatctgattg ttggacttat
     2701 attccgtatt gtaacgttta tttacagtgc tttcctggtc ctttatggca gcagaatagt
     2761 ctttttgaca taaaaaagga attggacagt tgttattgcc ttctttaaat atggcatgtt
     2821 ctgtcgcatg tccttgtaat gttaactgtg cattccggac agagatatcg tttttgatat
     2881 cgactgagcc atcaaagatc agattggcat tattgttatg ttgctgggta gtattgataa
     2941 tatgatttat gcttatatta cctgatacat tcccatggta catatatgca tcagtattag
     3001 taagtgataa tgttgattgc ttcacgtttg agttcgttac ggttgttccc gcatctgttg
     3061 ctgcgatttt ctgaaatgac tggtcatagc cgtttagatc cagtgttccg ccatttctgg
     3121 taaaatagat ttcgccatta ccgctttcgc ttaaagcgtc tttggcattt atttttaccg
     3181 tacctttacc tccggccatg taaattttat tgaaggcttt ttcagcacta aggatgacag
     3241 tcccattacc tattttaagg ttatttccct gtgctatttt tacatccaga gtaccactac
     3301 ctattttatg cagattatct ccggcaacgc ccttaacatt ccattcaacg gtggtattat
     3361 tatcaatatc tatcccggca cctttataag acttatcttt tccgtacact ttatatgtct
     3421 ggttcttatc gaatataagc ccgccaatgc caagatcggt atcctgcttg agcgttaatt
     3481 cccctcctcc tgagacagac aggtccttat cttttataat cgatgataac tcttgttttt
     3541 taccatccag ctgcatagtg tttgtgaaat tcttttttaa attgtttacc agaatattat
     3601 taaataacga gtagtttgtc caggctatat tggtactact gataaaacca actgtactgg
     3661 taacaccatg gaaaacccat ttttgttgtt ctttatcata tagataagaa ccagaaccac
     3721 tatcgccaaa aattggtgag tttttaaaag gggttctgtt ggtataaatg taactcttgt
     3781 ttttccagtc cagattaaaa agacttgcgc ttaacaagtc gggattatag ttttgtccaa
     3841 acagatattg tttgccgttt aatatcgttg aggttgttcc ggcacctgct ctgaagccaa
     3901 ttatttgttc cttaccgttg tagtttacgc catatctttt catcgcatct tcgggagaaa
     3961 gtgagaagtc ggcactctcc gtaacccctg ttgtttccac gacgaattta ttcagacgat
     4021 gaaccgaaaa gtcgccagat gatactctgt tacttgcttt atatgctgtc tgatcccatg
     4081 actgtgttgt tattgcatga tgctgtgtac cgttatgagt cgcagtaaca ctgtacgcac
     4141 ctccaattga tgttgttgca cctttgttgg aaacagcaga aaaatcaggt acaggtagtt
     4201 ctggaaaatg aaatatcttt ccatctttca tcattaattg aacatttgtt gcacccggtc
     4261 tgaactctcc tctgttttga gcaaggtcaa gataatcgcg ggtccatata ttatttatat
     4321 ccagcattgc tgcaaatgct gtttcaccat aacttccata tattgaggat aaaataatac
     4381 cgaggataac tttctttctt gatgtaccga cactaacttt ccgggtcagt tcagaaacag
     4441 caactaatcc acctgtaata tgactatatt tcagtgaata aattttattc atacgtgaac
     4501 tccgatattt ctgagttgtg gttatgggat agcatttaat tacaacgggg aactatcagt
     4561 catggtacgt aactgataag ggtataatga taatcactgt cagttatatt tgtatgacag
     4621 atgtaacaaa atgaaaaaaa agataagcac aagtgattga ttggtcagat attgatcacc
     4681 tggtgtttgt attttgacct ttgcgatcaa aatttgatct ttgttgtttc cggtcaatcc
     4741 tttacaggtt ttctgtatta tccgggggag ttaagtctgt cgatgtccga cagacttttg
     4801 atgatggaaa caacatgcag cgataatgtg catgctgttt tgcaggtgga actcagaagg
     4861 tgaactggaa ctgtgcgacc gcaccgtaag tgttgtccgt gccgatcagg cctgcaacat
     4921 caaggtgaac cacatcaaac ggtgagatcc ccaccccggc cgtgaatgca ctgccgtcgt
     4981 taccggccag attctgacgg taaccggcgc gcagctgtgc ccatttccag gcattaaatt
     5041 ctgcgccaat ggcggcaaac tgacggttgc tgtcggaggt gaaaccgctg gccggggtca
     5101 gatccacatc aaatgcggtg gtgaacatcg cgttgtgcca ggagacaccg gccgtcacct
     5161 gcgggcggat cctgaaggtt tccgtgatac cgttcacttc ttttgtctca atactacggg
     5221 ggatcaggtt ctgtgcgacc agtcccagcg tccagttgtc atccaggttc gtactggcac
     5281 cgatgtcggc gttgatgcca tttttcgtgt tgtggtagcg gtcgcctttg aaggcgctgc
     5341 tgtcataatt tctgaccagc acgttgtagt tgaacaggtc gacgcgctgg aatttggggg
     5401 ggaagcccag agaccatttc tgcccggccg tttccagttc cgtagccaga gcaataccca
     5461 catcagtgat cagtgccgcg cgggcaaagg cctgtgatgt caggcggctt ttgtccacct
     5521 cctgcccggt gctgtttgcc acctcttcca ggtaagtgag gtcagcatca gagactttac
     5581 cgtcgacact gacggtgccg tgtgatttaa ccatcagtgc ggcagagagg cgatcaccgg
     5641 gaagggccgc cacagcagaa acgcccagct gtgcggcggc atgtgtgtta cggaagtccc
     5701 ggaggtgttc tttcaggcgt gcggcagcct caggaacacc gtggttactt tcgatggcgc
     5761 ggtcgaaggc cttccactca tcactgatcc ggtcggcgtt gtcggtgata ttatccggat
     5821 tggagagctg cgcgccgacg gacggaagca ggatgctggg ctcatgcgcg acgcaaaatc
     5881 cacgatgtat atatcagtac taaaagcgcg acggcggaag aagctctgaa actaatcggt
     5941 gaactgtacg ccatagagca cgatatacgc gggttaccgg tgtctgaacg cctggcggtc
     6001 aggcaaatgc agagtagacc gctcctgact tccctgtata agctgatgca ggagaaagaa
     6061 cacacgttat cgaagaaatg tcgt
//
LOCUS       DADMIB010000212         6053 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.214, whole genome shotgun sequence.
ACCESSION   DADMIB010000212 DADMIB010000000
VERSION     DADMIB010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6053
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.214"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(97..2199)
                     /locus_tag="JNZ89_003991"
     CDS             complement(97..2199)
                     /locus_tag="JNZ89_003991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY8937690.1"
                     /translation="MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTP
                     AAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIR
                     GIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQ
                     QPPTIEASSYYGSFGSWRYGLKATGATGDGTQPSDVDYTVSTTRFTTHGYRDHSGAQK
                     NLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTI
                     KQTQAGLRYERSLSAQDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQ
                     GIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERN
                     LMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPA
                     GSLKYAMTDAWNIYLAVGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR
                     IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNA
                     SWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMA
                     DDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYE
                     PSPGRNYGVGMNIAWRFE"
     gene            2441..3502
                     /locus_tag="JNZ89_003992"
     CDS             2441..3502
                     /locus_tag="JNZ89_003992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HAY8937691.1"
                     /translation="MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAY
                     EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT
                     LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELLADDATNTVYISGI
                     GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKI
                     LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA
                     VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ
                     KSTKQQEATQPDDVIRIAL"
     gene            complement(3615..5114)
                     /gene="ansP"
                     /locus_tag="JNZ89_003993"
     CDS             complement(3615..5114)
                     /gene="ansP"
                     /locus_tag="JNZ89_003993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparagine permease"
                     /protein_id="HAY8937692.1"
                     /translation="MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI
                     GTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL
                     GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM
                     IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHG
                     LLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV
                     MLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMA
                     MGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS
                     WAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT
                     IAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS"
     gene            5381..5998
                     /locus_tag="JNZ89_003994"
     CDS             5381..5998
                     /locus_tag="JNZ89_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HAY8937693.1"
                     /translation="MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGTSRELL
                     KTLNPLCQIPTLTLENDEIMTETAAIALMVLDRRPDLAPPVGRAERQQFQRLLVWLVA
                     NVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDC
                     YLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII"
BASE COUNT         1612 a         1536 c         1441 g         1464 t
ORIGIN      
        1 ttgtcttgct gaaattatgc aacaaaatat tgctatttta taccagcaat acaatcgtta
       61 aagtaaatgc ccggcaaata ccgggcatca aggtaattac tcaaatctcc acgcaatatt
      121 catgccgaca ccataatttc gtccgggcga aggttcgtaa tatcgcccgt ttgactcatt
      181 gacaatgaca gaaccaacgt attctttatc gaataaatta tcgacacgac caaataaatc
      241 cacagttaaa ttgtggtaat tgtatttata cccggtgaat aagccgacga gagtataaga
      301 cggcgctttt gccgtatttt catcatctgc cataatatcg cccatataac gcgcttctgt
      361 gcctgcatac caaccatctt ccggtacata acctatcgac gcaaagccca tattacgggc
      421 gatccctggc atccgattac cgttacaatc ctgttcattg caaacattgc tgcgataggt
      481 cgcatcaagc caggtccagg acgcgtttac gcgaaaatct cctgcgaaac gttgatccca
      541 tgccagttca gcgccttgac gacgggtctt tccggcattt ttgtaagtcg tacgcccacc
      601 gctactgcta tcgacaacaa tttcatcatc agtgtcggtc tgaaacaatg cgagactaag
      661 cagcccatca ccaatacgcg ttttactgcc gatctcaatt gtatcgttgg tggatggttt
      721 taaaccaaag ttcataccgc tttgcccatc agcacgataa gacagctcat taatcgtcgg
      781 cgtttcaaaa cctcgcccga ctgccagata gatattccag gcatcggtca ttgcatattt
      841 taacgaaccg gcaggtagcc atttatgata actggcatca ccgctgtcat cgccgttacc
      901 cggagtaacg taatggtcgt tggaatcaaa ccacacggag ctgtagcgca cgccagcatc
      961 cagcgacagt ttttcgctca gctgccactg cgtctgtaaa tagggatcga tgttccacat
     1021 cagattgcgt tcgtcgcgac gcaactcacc tttttgcccg tactccggca tgccgctatt
     1081 caggcggaag ttattgtagc ccttgcggtt ttcactcatg ttttcgtagt tcaggccggt
     1141 agtgaacgtg accggaacgc ccagttcacc acggtgtgtc cagcggctgt ctatcccctg
     1201 gtaatggcgt tgcagggtaa tcacgccgcc cgcatgtgac gggttaagtt gtggtgccat
     1261 gggtattgac tggtactggg tcgtttctcg ctctccggca tacatcatca cactcatatc
     1321 atcttgcgcg ctcaggctac gctcatagcg caaccctgcc tgagtttgct tgatggtttt
     1381 tcgcgtgtcg tactgttctg cacgaggcgc ttgttgtgga ttagccttcc attctgcttt
     1441 ggttagccca cctgggtcat ctgctttgat atccacacta ttgaaaatca gacttaattt
     1501 gctggcttca tcaatgcgta cgcccagttt ggcattggct aaatttttct gtgcgccact
     1561 atggtcacga tagccgtggg tcgtaaaacg cgtggttgag acggtgtaat cgacatcgct
     1621 aggctgtgtg ccgtctcccg ttgcgcccgt tgctttcagc ccatagcgcc agctgccaaa
     1681 actgccgtag taactactgg cttcaatggt tggtggctgt tgtccggtct gggtggtgac
     1741 attcattacc ccaccagacg cgttgccata cagggcagag aaggggccac gcagcacttc
     1801 cacattttgc acactgctta aatcgatgtt ggatgtttgc ccttgcccgt cgggcatggt
     1861 ggcgggaata ccgtccacat acaggcgaat accgcgaata ccgtaagtgg agcgggagcc
     1921 aaatccgcga atcgacagct gtaaatcttg cgcatagttc tgccggtttt gtacctgcaa
     1981 accaggcacg ccggtcagtg attcggacaa gttaatgcgc ggtgttgcca ggcgcatctc
     2041 ctcgccatcc accacgctta ctgctgctgg ggtatccagt tctgaaacca cctgcggtgc
     2101 ggcactgaca atcatagtct gttcatcagc ggcaaaaaca acgggggaaa ggacaagcag
     2161 tgcgggcaaa acggtctgtc ggacggaaaa aatcttcatg aaaaaagcca ggttaagaat
     2221 gggaaaacgc tgtcatggta ataaaattgt aaacttatgc aaaacgaaac ggcacgatac
     2281 gttaattaat tgagaaaatt gtagtcgtaa cggcaagaaa tgctccacat ttgagaaaat
     2341 aatgattacc attcccattt ataacaagag cgtgacgatg attacgctta gcgaagcatt
     2401 gtgaagcagc aaaaatattg gttcatcaaa gggagtcgtc atgcatttac gtcatctgtt
     2461 ttcatcgcgc ctgcgtggtt cattactgtt aggttcattg cttgttgctt catcattcag
     2521 tacgcaggcc gcagaagaaa tgctgcgtaa agcggtaggt aaaggtgcct acgaaatggc
     2581 ttatagccag caagaaaacg cgctgtggct cgccacttcg caaagccgca aactggataa
     2641 aggtggcgtg gtttatcgtc ttgatccggt cactctggaa gtgacgcagg cgatccataa
     2701 cgatctcaag ccgtttggtg ccaccatcaa taacacgact cagacgttgt ggtttggtaa
     2761 caccgtaaac agcgcggtca cggcgataga tgccaaaacg ggcgaagtga aaggccgtct
     2821 ggtgctggat gatcgtaagc gcacggaaga ggtgcgcccg ctgcaaccgc gtgagctgct
     2881 agctgatgat gccacgaaca ccgtttacat cagtggtatt ggtaaagaga gcgtgatttg
     2941 ggtcgttgat ggcgagaata tcaaactgaa aaccgccatc cagaacaccg gtaaaatgag
     3001 taccggtctg gcgcttgata gcaaaggcaa acgtctttac accactaacg ctgacggcga
     3061 attgattacc atcgacaccg ccgacaataa aatcctcagc cgtaaaaagc tgctggatga
     3121 cggcaaagag cacttcttta tcaacatcag ccttgatacc gccaggcagc gtgcatttat
     3181 caccgattct aaagcggcag aagtgttagt ggtcgatacc cgtaatggca atattctggc
     3241 gaaggttgcg gcaccggaat cactggctgt gctgtttaac cccgcgcgta atgaagccta
     3301 cgtaacgcat cgtcaggcag gtaaagtcag tgtgattgac gcgaaaagct ataaagtggt
     3361 gaaaacgttc gatacgccga ctcatccaaa cagcctggcg ctgtctgccg atggcaaaac
     3421 gctgtatgtc agtgtgaaac aaaaatccac taaacagcag gaagctaccc agccagacga
     3481 tgtgattcgt attgcgctgt aatagatatg gcgagggtga aaacggtgag acttgcctgc
     3541 cttttatcac ggcgtatccg gcactttcgt cagtaatctg aatttgcccg gcacgtagcc
     3601 gggcaatttt gcaattaact cgccgtttca ggcttaaaca caatttcctg tttttcttca
     3661 tcttcctcga cgactggcgc agtgctgtga atttcagcaa cgcgtttgcg cacaccaaac
     3721 cagcctataa ccagcagaat accgataatc ggcagcgccg cgatagtata agtcccgttc
     3781 gggtaatcga acgccatcag cacaaggaca ctcagtaaaa acagtaatgt cagccaggaa
     3841 gtgaagggcg cgccaggcag tttaaaactg acatccgctg ctttgccttc tttaatcgct
     3901 ttacgcaggc gcatctggca cacgatgata aacgcccatg aagcgatgat tcccagcgac
     3961 gcgaagttca acacaatctc aaatacgcgc gacggcacca gatagttgag gaatacgccg
     4021 acgacataca caaccagtgt cgctagaatc ccggcatacg gcacatgctg acgactcatt
     4081 ttcgccataa aactcggtgc ggaaccgccc atcgccattg agcgcagaat acgtccggtg
     4141 cagtacagac ctgagttcag gctggagagg gcagcggtca gcaccacaat gttcataatg
     4201 ctgccgatat atggcacacc cagtttagag aaaaacgtca cgaacggact ttgccccgcc
     4261 tgatacgcgc tccacggcaa taacataacc agcaacacca cggagccgac gtaaaacagg
     4321 ccaatacgcc aaatcacact gttaatggct ttaggcacca tggtctgcgg atctttacat
     4381 tctccggcag ctgtacccac catttcaatg gaggcaaaag caaacactac gccctgaatc
     4441 aacaccagcg caggcagcaa accgtggggg aagaagccgc cattatcggt gattaaatga
     4501 aagccagtgg tgttgccatc cagcggctga ccactaccga ggaacactgt acccacgacc
     4561 aaaaaggtca caatggcgag cactttaata agcgcaaacc agaactccat ctccgcaaac
     4621 catttcacac cgatcatatt catggtgcca acgatggtaa gtgcagcgag cgcaaagacc
     4681 cactgcggca cgccgccaaa cgcaccccag taatgcatat acagagcgac ggcggtaata
     4741 tcaacaatcc ccgtcatcgc ccagttgatg aagtacatcc agccagcaac ataagcggct
     4801 ttctcaccca aaaactcacg ggcataagag acaaaactgc cactggaagg gcggtgtagc
     4861 accagctcac ccaatgcacg cagaataaaa aacgaaaaca agccacaaat taaataaacc
     4921 agtgccagtg ctggacccgc catttgcagt cgggctcctg cacctaaaaa caagccggtg
     4981 ccaatcgcgc cgccaatggc gatcatctgt acctggcgat tgcccatcgc tttgtgatac
     5041 ccctcttcgt gggcattaag ccagcggcgt ttcgcggcgt gttgatctga agtgtcggtg
     5101 tcgtgtttac tcattgctct ccctgattgc tttaatgaaa aagtcatata agttgccatg
     5161 aacaatgttt attcatcctg gcgatgatag ttatcaccat tattctttat gggtataaaa
     5221 ctatcggcgc agcatcctac ccgttatcga tatacgatgc aaaacatccc cttacaatcc
     5281 tgaaggggat tcatacaact gacgaaaaaa tgacaaatac ttttgctggt taacctgtgt
     5341 actgtcctac acttaatctt taaaagattg tgaggggcat atgattaagg tgtatggcgt
     5401 acccggatgg ggctctacaa tcagtgagct gatgctaaca ctggctgata ttccttatca
     5461 gttcgttgat gtcagtggtt ttgaccacga gggaacttca cgcgagttat tgaaaaccct
     5521 gaacccgttg tgtcagattc cgacactgac gctggaaaat gacgagatta tgacggagac
     5581 agcggcgatt gcattgatgg ttctcgatcg tcgcccggac cttgcgccac cggttgggcg
     5641 cgccgaacgt cagcagtttc aacggctatt ggtctggctg gttgctaatg tctatccaac
     5701 attcactttc gccgattacc ctgagcgttg ggctcctgac gcacctgaac agttaaagaa
     5761 gaatgttatt gaatatcgta aatcgcttta tatctggctg aattcacaat tgaccgctga
     5821 accttatgcg tttggtgagc aactaacgct ggtggactgt tatctttgca ctatgcgcac
     5881 atgggggcct gggcatgaat ggtttcagga taatgccacg aatatcagtg cgattgctga
     5941 tgctgtatgt cagttaccga aattacaaga agtattaaaa aggaatgaaa ttatttgagt
     6001 gggataccag aggattatgt tatttattat tcagtaactt tatccacaat gat
//
LOCUS       DADMIB010000213         5912 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.215, whole genome shotgun sequence.
ACCESSION   DADMIB010000213 DADMIB010000000
VERSION     DADMIB010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5912
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.215"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..466)
                     /gene="dsbG"
                     /locus_tag="JNZ89_003995"
     CDS             complement(<1..466)
                     /gene="dsbG"
                     /locus_tag="JNZ89_003995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706462.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HAY8937694.1"
                     /translation="MTVIGYAFYSTFALTEKDKLMLKKILLLALLPAIAFAEELPAPV
                     KAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSN
                     TLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQ"
     gene            778..1341
                     /gene="ahpC"
                     /locus_tag="JNZ89_003996"
     CDS             778..1341
                     /gene="ahpC"
                     /locus_tag="JNZ89_003996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HAY8937695.1"
                     /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT
                     FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
                     ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS
                     HPGEVCPAKWKEGEATLAPSLDLVGKI"
     gene            1512..3077
                     /gene="ahpF"
                     /locus_tag="JNZ89_003997"
     CDS             1512..3077
                     /gene="ahpF"
                     /locus_tag="JNZ89_003997"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415139.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HAY8937696.1"
                     /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
                     ELSDKVTFKEDNSLPVRKPSFLITNPGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS
                     KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ
                     NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV
                     GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH
                     VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE
                     DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA
                     DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG
                     LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS
                     LSAFDYLIRTKTA"
     gene            complement(3198..3626)
                     /gene="uspG"
                     /locus_tag="JNZ89_003998"
     CDS             complement(3198..3626)
                     /gene="uspG"
                     /locus_tag="JNZ89_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspG"
                     /protein_id="HAY8937697.1"
                     /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLTQDDGVIHLLHVLPGSA
                     SLSLDRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE
                     ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR"
     gene            3847..5085
                     /locus_tag="JNZ89_003999"
     CDS             3847..5085
                     /locus_tag="JNZ89_003999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
                     /protein_id="HAY8937698.1"
                     /translation="MKALTYHGPHHVQVENVPDPGIEQADDIILRITATAICGSDLHL
                     YRGKIPQVKHGDIFGHEFMGEVVETGKDVKNLQKGDRVVIPFVIACGDCFFCRMQQYA
                     ACENTNAGKGAALNKKQIPAPAALFGYSHLYGGVPGGQAEYVRVPKGNVGPFKVPPLL
                     SDDKALFLSDILPTAWQAAKNAQIQQGSSVAVYGAGPVGLLTIACARLLGAEQIFVVD
                     HHPYRLSFAADRYGAIPINFDEDSDPAQSIIEQTAGHRGVDAVIDAVGFEAKGSTTET
                     VLTNLKLEGSSGKALRQCIAAVRRGGIVSVPGVYAGFIHGFLFGDAFDKGLTFKMGQT
                     HVHAWLGELLPLIEKGLLKPEEIVTHYMPFEEAARGYEIFEKREEECRKVILVPGAQS
                     AEEAQKAVSGLVNAMPGGTI"
     gene            complement(5316..5726)
                     /gene="rnk"
                     /locus_tag="JNZ89_004000"
     CDS             complement(5316..5726)
                     /gene="rnk"
                     /locus_tag="JNZ89_004000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HAY8937699.1"
                     /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC
                     SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR
                     VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL"
BASE COUNT         1525 a         1408 c         1533 g         1446 t
ORIGIN      
        1 cctgctgcca gaactgttta caatatgggc agaacggatc ggcgaagacg tagacaatga
       61 ccggcgcatc ttttttaccg tcgaggagcc agtgggattg ttccatccgt tgccacattt
      121 cgcgtccggc tggtgcgtaa atttcttttt cgataagtgt gttactcagg ttttcacctt
      181 tctcgttgta catgtaacca gagatagcgt gcttaccatc tggagtcagg tagatggtga
      241 cgcccatatc ctgatacttt ccgagataac ctttcattcc tccgggggca tcgaacgttt
      301 tgatgattgt aatgccctgt ttttcaatcg cttttactgg agcaggaagt tcctctgcga
      361 aggcgattgc aggaagcaga gccagtaaaa gtatcttttt taacattaat ttgtcctttt
      421 cagtcagtgc aaaagtcgag taaaaggcat aacctatcac tgtcataggt aagagcttag
      481 atcaggtgat tgccctttgt ttatgagggt gttgtaatcc atgtcgttgt tgcatttgta
      541 agggcaacgc ctcagcctgc aggcaggcgc tgaagatacc aaagggtagt tcagattaca
      601 cggtcacctg gaaagggggc cattttactt tttatcgccg ctggcggtgc aaagttcaca
      661 aagttgtctt acgaaggttg taaggtaaaa cttatcgatt tgataatgga aacgcattag
      721 ccgaatcggc aaaaattggt taccttacat ctcatcgaaa acacggagga agtatagatg
      781 tccttgatta acaccaaaat taaacctttt aaaaaccagg cattcaaaaa cggcgaattc
      841 atcgaaatca ccgaaaaaga taccgaaggc cgctggagcg tcttcttctt ctacccggct
      901 gactttactt tcgtatgccc gaccgaactg ggtgacgttg ctgaccacta cgaagaactg
      961 cagaaactgg gcgtagacgt atacgcagta tctaccgata ctcacttcac ccacaaagca
     1021 tggcacagca gctctgaaac catcgctaaa atcaaatatg cgatgatcgg cgacccgact
     1081 ggcgccctga cccgtaactt cgacaacatg cgtgaagatg aaggtctggc tgaccgtgcg
     1141 accttcgttg ttgacccgca gggtatcatc caggcaatcg aagttaccgc tgaaggcatt
     1201 ggccgtgacg cgtctgacct gctgcgtaaa atcaaagcag cacagtacgt agcttctcac
     1261 ccaggtgaag tttgcccggc taaatggaaa gaaggtgaag caactctggc tccgtctctg
     1321 gacctggttg gtaaaatcta aatttccttc gtctttcgcg ctaccaactc cggcgcgaaa
     1381 tacttcggaa attcacctaa ttcttcgggt gctgcggcac ccgattttct tccccgcact
     1441 atgatgcaag ctgcatccag gtagccgtag aggccgcttg catgatgatg tttaaagccc
     1501 aggagataaa catgctcgac acaaatatga aaactcaact caaggcttac cttgagaaat
     1561 tgaccaagcc tgttgagtta attgccacgc tggatgacag cgctaaatcg gcagaaatca
     1621 aggaactgtt ggctgaaatc gcagaactgt cagacaaagt cacctttaaa gaagataaca
     1681 gcttgccggt gcgtaagccg tctttcctga tcaccaaccc aggttccaac caggggccac
     1741 gttttgcagg ctccccgctg ggccacgagt tcacctcgct ggtactggcg ttgctgtgga
     1801 ccggtggtca tccgtcgaaa gaagcgcagt ctctgctgga gcagattcgc catattgacg
     1861 gtgattttga attcgaaacc tattactcgc tctcttgcca taactgcccg gacgtggtgc
     1921 aggcgctgaa cctgatgagc gtactgaacc cgcgcatcaa gcacactgca attgacggcg
     1981 gcaccttcca gaacgaaatc accgatcgca acgtgatggg cgttccggca gtgttcgtaa
     2041 acgggaaaga gtttggtcag ggccgcatga cgttgactga aatcgttgcc aaaattgata
     2101 cgggcgcgga aaaacgtgcg gcagaagagc tgaacaagcg tgatgcttat gacgtattaa
     2161 tcgtcggttc cggcccggcg ggtgcagcgg cagcaattta ctccgcacgt aaaggcatcc
     2221 gtaccggtct gatgggcgaa cgttttggtg gtcagatcct cgataccgtt gatatcgaaa
     2281 actacatttc tgtaccgaag actgaagggc agaagctggc aggcgcactg aaagttcacg
     2341 ttgatgaata cgacgttgat gtgatcgaca gccagagcgc cagcaaactg atcccagcag
     2401 cagttgaagg tggtctgcat cagattgaaa cagcttctgg cgcggtactg aaagcacgca
     2461 gcattatcgt ggcgaccggt gcaaaatggc gcaacatgaa cgttccgggc gaagatcagt
     2521 atcgcaccaa aggcgtgacc tactgcccgc actgcgacgg cccgctgttt aaaggtaaac
     2581 gcgtagcggt tatcggcggc ggtaactccg gcgtggaagc ggcaattgac ctggcgggta
     2641 tcgttgagca cgtaacgctg ctggaatttg cgccagaaat gaaagccgac caggttctgc
     2701 aggacaaact gcgcagcctg aaaaacgtcg acattattct gaatgcgcaa accacggaag
     2761 tgaaaggcga cggcagcaaa gtcgttggtc tggaatatcg agatcgtgtc agcggcgata
     2821 ttcacaacat cgaactggcc ggtattttcg tgcagattgg tctgctgccg aacaccaact
     2881 ggctcgaagg cgcagtcgaa cgtaaccgca tgggtgagat tatcattgat gcgaaatgcg
     2941 aaaccaacgt caaaggcgta ttcgcagcgg gtgactgtac gacggttccg tacaagcaga
     3001 tcatcatcgc cactggcgaa ggtgccaaag cctctctgag tgcttttgac tacctgattc
     3061 gcaccaaaac tgcataagaa gaagtaagat tcacctgcaa ttgcttagcc gccggggtca
     3121 aacctagcgg cttttttatg gcattaaaaa gccctgccgg gatgttccag gcagggcggc
     3181 ataaatactt ttatctgtta gcgaacgacc agtacaggca gattggcgtg gcggatcacg
     3241 ctcgaggcgt tagaacctaa cagatgggtc gaaatcgatg ggttgcgaga accgataact
     3301 acaacatcag cccccagttc ttctgccaac tcattgactt catcccgcac gctaccaaaa
     3361 cggacatgtt gtttaatgcg ggaaggatcg atggtgaagt ggctgaccat cgtttgcaga
     3421 cgttcttctg cttcatgttg cagatgctct tcaaaacgac gcacatcagc ggcaaaacgg
     3481 tccaggctca ggctggctga cccgggtagt acgtgaagta gatgaataac tccgtcatcc
     3541 tgggtgagga attcagcgtg gcgaacagct ttgtcgctca attccatttc aaatacatca
     3601 actggcataa tgattgtctt atacataacc ctttctccct gttaatcatg aacaaatcat
     3661 tcgccatgat tataatattt atccctgata tttgtctggt tctttttcct tacgaacggt
     3721 ttctgtgatt aatatattct cactgaacac caggaattct cccaaaacct gcggtaccgc
     3781 ccgttttccc gctgtgatag ctacccttaa agactgactc ttttttgaac tgtctctgga
     3841 ggttgcatga aagcattgac ttatcacggc ccacatcacg ttcaggtaga aaatgttccc
     3901 gatccgggca ttgaacaggc agatgatatt attctgcgta ttacggcaac ggcgatctgt
     3961 ggctctgatc tccatcttta tcgaggcaaa ataccccagg ttaaacatgg cgatattttt
     4021 ggtcatgaat ttatggggga agtcgttgaa accggaaagg acgtaaaaaa tttgcaaaaa
     4081 ggcgaccggg tggtaattcc gtttgtcatt gcttgtggcg actgtttttt ctgtcgaatg
     4141 cagcaatatg ccgcctgcga aaataccaat gcgggtaaag gcgctgcgct caataaaaaa
     4201 cagataccag ctcccgcggc attgtttggt tatagtcacc tgtatggtgg cgttcctggt
     4261 ggacaggcgg aatatgtccg cgtccctaaa gggaatgtgg ggccgtttaa agtaccgcct
     4321 ttgctttcag atgataaagc ccttttcctt tctgatattc tgccaacggc atggcaggca
     4381 gcaaaaaatg cgcagatcca acaaggttca agcgttgcag tctatggtgc cggtccagtg
     4441 ggattgttga caatcgcctg tgcacggttg ctcggtgcgg aacagatttt tgttgttgat
     4501 catcatccct accgcttgag tttcgccgct gaccgctacg gcgcgatccc gattaatttc
     4561 gatgaagata gcgatccggc acagtcaatt attgaacaaa cggcaggtca ccggggcgtg
     4621 gatgcagtaa tagacgccgt cggttttgaa gcgaaaggca gcaccacgga aacggtgctg
     4681 actaacctga aactggaggg cagcagcggt aaagcgttgc gccagtgtat tgcggcggtc
     4741 aggcgtggcg gcattgttag cgtaccgggc gtctacgctg gatttattca cggtttcctg
     4801 tttggtgacg cctttgataa agggttgacg tttaaaatgg gacagaccca cgttcacgca
     4861 tggctgggag aattattacc gttaattgag aaaggattac tgaaaccaga agaaattgtt
     4921 acccactata tgccgtttga agaggccgcc cggggatatg agattttcga aaaacgtgaa
     4981 gaggagtgcc gtaaggtgat tctggtaccc ggtgcacaaa gcgcagagga ggcgcagaag
     5041 gcagtttcag gtctggtgaa tgcgatgccg gggggaacaa tatgatcgtc aggagtggtt
     5101 ttcgaggtaa aggacagcca tgacgataat cgccgccata atcagaaatc ctatcaggat
     5161 gtaaaatgct tctgccatgg ttattcccac aaacgaaacg gaataatttt gcagcaaaag
     5221 tgaacagtga gaaccaggaa aaattgctga ttttgcgtaa agaggatgcg agtgcatcct
     5281 ctgggcaaag cgagttatcg cttgtgctga tgggattaaa gcaggtagtc gccagcagct
     5341 tctggctggt attcgagttc cagcacttca aggtgggttg caacgccgcc cggaagttcc
     5401 cagtgaatgg aatcgccaac gcgcagcccc agcagtgcgg cacctaccgg agccataacg
     5461 gaaagctgag tattgctatc ggtcattttt gccggataca ccagcgtgcg cacacgcact
     5521 tcgccatcgc taagattgcg gaatttaacc cggctgttca ttgtcaccac gtcgtgtggc
     5581 atctcttctg gcgaacacat ttgggcgcga tccaactctg cgtttaacgc gtcggcgatt
     5641 ggcaaaccag cataggcggg ttgctccagc agaatatcga tgcgttcggc atccaggtcg
     5701 ttaatgatga tagttggtct ggacattttt actccatgtc gtcggtactg cgagtgtcgc
     5761 agataaacat acccaaaaga aaaccctcac cgtcaggcgg cgagggttta actcacatga
     5821 tgatactgac tgttgctcac tctttgaagt gatttgcgtc acattcaggg aattcctcaa
     5881 tgcagcgcat tatgtataat tcttaatcgt ca
//
LOCUS       DADMIB010000214         5893 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.216, whole genome shotgun sequence.
ACCESSION   DADMIB010000214 DADMIB010000000
VERSION     DADMIB010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5893
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.216"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1264
                     /locus_tag="JNZ89_004001"
     CDS             <1..1264
                     /locus_tag="JNZ89_004001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HAY8937700.1"
                     /translation="ADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQMDGLETVLA
                     AMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALAR
                     RKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAKAVDVKLAQWIEDNVTFPSTMVDRIV
                     PAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPY
                     EEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVD
                     LQDYANRLIERYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVA
                     GWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNS
                     LFTAKVTEAYLSLLAHGAKATVAKYSVK"
     gene            complement(1300..1503)
                     /gene="ydfZ"
                     /locus_tag="JNZ89_004002"
     CDS             complement(1300..1503)
                     /gene="ydfZ"
                     /locus_tag="JNZ89_004002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium delivery protein YdfZ"
                     /protein_id="HAY8937701.1"
                     /translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG
                     KTVVVEGCEEKLAPLDLIRLGMN"
     gene            complement(1681..2365)
                     /locus_tag="JNZ89_004003"
                     /pseudo
     CDS             complement(1681..2365)
                     /locus_tag="JNZ89_004003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310176.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
     gene            complement(2454..3200)
                     /gene="ydfG"
                     /locus_tag="JNZ89_004004"
     CDS             complement(2454..3200)
                     /gene="ydfG"
                     /locus_tag="JNZ89_004004"
                     /EC_number="1.1.1.298"
                     /EC_number="1.1.1.381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional NADP-dependent 3-hydroxy acid
                     dehydrogenase/3-hydroxypropionate dehydrogenase YdfG"
                     /protein_id="HAY8937702.1"
                     /translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL
                     GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM
                     IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
                     LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW
                     VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ"
     gene            3337..5382
                     /gene="dcp"
                     /locus_tag="JNZ89_004005"
     CDS             3337..5382
                     /gene="dcp"
                     /locus_tag="JNZ89_004005"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707439.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HAY8937703.1"
                     /translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA
                     AIALNPQTPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL
                     ANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKV
                     LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL
                     IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQAKLL
                     GFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP
                     WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH
                     PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNETHPVIYNVCNYQ
                     KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW
                     ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE
                     NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD
                     GYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLYRQWRGKAPQIMPMLQHRGLNI"
     gene            complement(5427..>5893)
                     /locus_tag="JNZ89_004006"
     CDS             complement(5427..>5893)
                     /locus_tag="JNZ89_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HAY8937704.1"
                     /translation="NLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGA
                     GFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGLE
                     GGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFAHVQLLQLLL"
BASE COUNT         1458 a         1425 c         1529 g         1481 t
ORIGIN      
        1 tgccgattta caacagcaag ataatcttta taccgttgcg gaaatgtcgg ccgatgcgtg
       61 gacggctcgc gtcgttggcg tcgttaaaaa agccttgcac gtacagatgg atggcttaga
      121 aaccgtgttg gctgcgatgt gtgaaccgca aatcgcgatt gtctctctga caatcaccga
      181 aaaagggtat ttccactctc cggcgaccgg acagttaatg ctcgatcacc cgatggtcgc
      241 tgccgacgtg caaaatcccc accagccgaa aacagcaaca ggggtgattg ttgaggcgct
      301 ggcccgccgt aaagcggcag gacttcccgc atttaccgtc atgtcatgtg acaacatgcc
      361 agaaaacggt catgttatgc gtgacgttgt cacttcatac gcgaaagctg ttgatgtaaa
      421 actggcacaa tggatcgaag ataacgtgac tttcccatca acaatggtgg accgtattgt
      481 gcccgcagtg acagaggata cgctggcgaa aatcgaacaa cttaccggtg tgcgcgatcc
      541 tgcgggcgtt gcctgtgaac ctttccgcca gtgggtaata gaagataact ttgttgccgg
      601 acgtccagaa tgggaaaaag cgggagccga actggttagt gatgtgctgc cttatgaaga
      661 gatgaagttg cgcatgctca acggcagtca ttcattcctg gcgtatttgg gttatcttgc
      721 cggatatcag cacattaatg actgcatgga agatgaacat tatcgttatg cggcgtatgg
      781 cttgatgttg caggaacaag cgccgacgct gaaagtgcag ggcgttgatt tgcaagatta
      841 cgctaaccga ttaattgaac gctatagcaa tccggcgtta cgtcatcgaa cctggcagat
      901 tgcgatggat ggtagccaga aattgccaca gcggatgttg gattctgttc gctggcatct
      961 ggcgcatgac agcaagttcg atctgctggc gctgggcgtc gcgggttgga tgcgttatgt
     1021 cggtggtgtt gatgaacagg gaaatccgat agaaatcagt gacccactgt tacctgttat
     1081 tcagaaggct gtacaaagta gtgccgaagg gaaagcgcgc gtccagtcat tgctggcgat
     1141 taaggcaatc tttggtgatg atttgccaga caatagcttg tttactgcaa aagtgacgga
     1201 agcgtacttg tctttattag cgcatggcgc gaaagcgacc gtggcgaaat attccgtgaa
     1261 gtaaaaaaag caatgccgcc atcggcggca ttcacacact tagttcatgc cgagacgaat
     1321 caggtccaga ggtgccagtt tctcttcaca accttcaaca actacggttt ttccgcggcg
     1381 gatttgctca gcggtcagac cttcagtatc aatcgacagg atcttgccag tgtgaccggt
     1441 gccgctaacc ataacacggc tgccagtggt gattgcgtta cggttacgat cgtaggtcgt
     1501 cataggtgtt ttctcctttc tgatttacag tcgaagccca cgtaacgggc gcaatataaa
     1561 tactcctgtc gagtgaaata ttttttgttt ttgatcaagc tcacatcttt tttgatgcat
     1621 gcatgagccg taaggcgggg ggaaaagcct ctcatcccgg atgggatgag agtaaatgaa
     1681 ttactcttcg ctaaaccagt cgctgttttc ctggcggatc tggccacgga ttcgctgatt
     1741 tcctgcaaat gttgcgtcat tgcacgttct accgcatcgc catcacgttt ttgcagggca
     1801 gagaaaatat caagatgctg gcgtaacagc atttctggtg gagaaacatg gtcgaaactc
     1861 atatagcgca cgcgatcaac ggtcgctttc aggttctcaa tggtatccca cgccagttga
     1921 cagtcggcaa tctgcgtcag gagttgatgg aagttgtcat caagttcaaa aaatcatcca
     1981 gttgcttgtg ctcaatggca atgcgttgct ggtgaagatt ttgttccagt tggtagcact
     2041 ggctttcggt aatcatgctc gccgcccgac gcgccaccgc gcactcaatg gcctgacgga
     2101 taaaactgcc gttgcgcacc tgggccatgg aaattttgtt gacgtagctg ccacgctgtg
     2161 gacgaatttg aatcaggccg ttttccgcca gtttaataaa ggcttcacga accggctggc
     2221 gtgacacatt gaaacgaaca gaaacttctt tttccgacaa cggtgtgcct ggagcaatca
     2281 ggcaatggac aatgtcgcga cgaaggatac gataaatttg ctgattgaca ggctgtgtgg
     2341 gattaagttg cgtttcgacg gtcattcgtt cttgcttgtg agtgagttaa ctgcatgagt
     2401 ctaccacttt tttgtgacaa gcaataaccc ggcagttacg ccgggtataa aaattactga
     2461 cggtggacat tcagtccggc atagctttgg gtaaccggca tcatttccag ggtattgata
     2521 ttgacgtgag caggcagcgt tgacacccac caaacggctt cgctgacatc ttctggcgtc
     2581 aatgcaacgg tattttgata ggttttttcc gctttaccgt catcgccttt aaagcggaca
     2641 ttggaaaact cggtgccacc caccagaccc ggttcgatgt cggtgacgcg caccgccgta
     2701 ccatgcaggt ccgtacgcag attcaggcta aactgacgaa caaacgcttt cgtcgcaccg
     2761 taaacgttac caccggcata aggccagcta cctgccgttg agccaatgtt aataatatga
     2821 ccatgattac gttcaaccat acccggtaag acggcgcgcg tcatatatac caggcctttg
     2881 ttgttggtat caatcatcgt ttcccagtct tcaacgctgg ctttatgcgc aggctccatg
     2941 cccaacgcca ggccggcatt atttaccagg atatcaatat tgcaccactc ggcaggaagc
     3001 gatgccagca tctcttcaat agcggcgcgg ttgcgaacgt ccagttgggc gatgtacaga
     3061 ttatctccca gttcgtcttt taactcctgc aaccgttcct ggcgacggcc agtggcgata
     3121 actttatgcc cttgttgaat aaaacgacga gtaatgcatt caccaaaacc tgccgttgct
     3181 ccagttacta aaacgatcat ctcactgttc ctcaacgctt ttgtgtgtca ataacatagc
     3241 acgtgatgct taagagcggg taatactggt ttgtaagatt gcactccgtt atcagtaagc
     3301 ctacgctatg gaacacctcg cgttcaggag aagaaaatga caacaatgaa tcctttcctt
     3361 gtgcaaagca cactaccgta tctggctccc cattttgatc aaattgccaa tcatcactat
     3421 cgcccggcat tcgatgaggg aatgcagcaa aagcgggcag aaattgctgc catcgcgctt
     3481 aacccgcaaa cgcctgattt caacaatact attctggcac tggaacaaag cggagaatta
     3541 cttacccgcg ttaccagcgt cttttttgcg atgactgcgg cgcataccaa tgatgaatta
     3601 cagcgtcttg atgaacagtt ttccgctgaa ctggcggaac tggctaatga tatctatctg
     3661 aacggtgaat tattcgcgcg ggtagatgct gtctggcagc gccgtgaatc cctggggctt
     3721 gatagtgaat ccatccgcct ggtggaggtg attcatcaac gttttgtcct tgccggagcc
     3781 aaacttgcgc aagctgataa agcaaaatta aaagtactga atacagaagc tgcgaccctg
     3841 accagccagt ttaaccagcg attactggca gcaaataaat ccggcggtct ggttgtgaac
     3901 gatatcgcgc agctggcagg aatgagtgag caagagattg cgctggcggc agaggcggct
     3961 cgcgagaaag gtctggataa caaatggctg attccgctgc tgaataccac ccaacaaccg
     4021 gcgcttgccg agatgcgcga tcgtgcgacg cgtgaaaaac tgtttattgc gggctggacg
     4081 cgagcggaaa aaaatgatgc caatgatacc cgcgctatca ttcaacgtct ggtagagatt
     4141 cgcgcacagc aggcgaaact gcttggtttt cctcattatg ccgcatggaa aatcgccgat
     4201 cagatggcaa aaacgccaga agcagcactc aactttatgc gggaaattgt tccagcggcg
     4261 cgtcaacgtg ctagcgatga attagcctcc atacaggcgg ttatcgataa gcagcaaggc
     4321 gggtttagcg cgcagccgtg ggactgggca ttttatgccg aacaggtacg gcgggagaaa
     4381 tttgatcttg atgaggcgca gctcaagcca tattttgaat taaacacggt gttgaatgaa
     4441 ggtgtattct ggaccgcgaa tcagctcttc ggtattaagt ttgtcgaacg ttttgatatt
     4501 cctgtctacc atcctgacgt tcgtgtgtgg gaaatttttg atcataatgg cgtgggactg
     4561 gcgttatttt acggtgattt cttcgcccgt gattcaaaaa gcggcggtgc atggatgggc
     4621 aattttgttg agcaatcaac gcttaatgaa acgcatccgg taatttataa cgtttgcaat
     4681 tatcagaaac ccgctgccgg tgagcctgcg ttgttactct gggatgatgt cataacctta
     4741 ttccatgaat ttggtcatac gctgcacggc ctttttgccc gccagcgtta tgccacgctt
     4801 tccggcacca acacgccgcg tgattttgtc gaatttccgt cgcaaatcaa cgaacactgg
     4861 gcaacgcatc cgcaggtatt cgctcgctac gcccggcatt atcagagcgg ggcagcaatg
     4921 cctgacgaac tgcaacagaa aatgcgtaat gccagcctgt tcaacaaagg gtatgagatg
     4981 agcgaactgc ttagcgccgc acttctcgat atgcgctggc attgcctgga agaaaacgaa
     5041 gcaatgcagg atgtcgatga ttttgaattg cgggcgctgg tggcggaaaa tatggatctt
     5101 cctgctatac cgccacgcta tcgcagcagt tatttcgccc atatttttgg tggcggatat
     5161 gctgcaggtt attacgctta tctgtggacg caaatgttgg ccgatgatgg ttaccagtgg
     5221 tttgttgagc agggcggatt aacgcgtgaa aatgggcagc gttttcgcga ggcgatcctt
     5281 tccagaggta acagcgaaga tctggaacgc ctgtatcgac aatggcgcgg taaggctcct
     5341 cagattatgc cgatgctgca acatcgtggc ttgaatatat aaacaccacc aatggctggc
     5401 ctggagatat cgccaggcca gcctggttat agcagtaatt gcagcagctg gacgtgggca
     5461 aacctcaccg ctaaagctaa taccgtttcg cagtcgccag caaaatgcat aaccgcagtg
     5521 taggtctggc ctttaatatg ccacgcgaac cagacggtac ccgctggcgt accatcttca
     5581 ccgccctcca gtccgccgta gccggtaatg gcaatactga catcagcatc cgcacgctct
     5641 atggcacctg ttgccatttc tgctgccact ttctcactca ccgcagaata tcgttcaaga
     5701 gattgctggc ttacgctgag gattttcatc tttgcctgat cggtgaaagt aacaaagcct
     5761 gcaccgtaaa atttgggtgt atcttcagct gcacacaggg cgctagccaa cttaccgccg
     5821 gtgcatgatt cggcggtagt taagcgtaat tgatccgcga taagtctttg actcaacgcg
     5881 gatgtcaggt ttt
//
LOCUS       DADMIB010000215         5838 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.217, whole genome shotgun sequence.
ACCESSION   DADMIB010000215 DADMIB010000000
VERSION     DADMIB010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5838
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.217"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..181)
                     /locus_tag="JNZ89_004007"
     CDS             complement(<1..181)
                     /locus_tag="JNZ89_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937705.1"
                     /translation="MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYIC
                     VNSDGISPELTRKYLG"
     gene            707..1402
                     /gene="minC"
                     /locus_tag="JNZ89_004008"
     CDS             707..1402
                     /gene="minC"
                     /locus_tag="JNZ89_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HAY8937706.1"
                     /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK
                     HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK
                     EKAPRPAPAPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD
                     GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL
                     QLVENALTVQPLN"
     gene            1426..2238
                     /gene="minD"
                     /locus_tag="JNZ89_004009"
     CDS             1426..2238
                     /gene="minD"
                     /locus_tag="JNZ89_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HAY8937707.1"
                     /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
                     NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV
                     AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
                     ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL
                     RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG"
     gene            2242..2508
                     /gene="minE"
                     /locus_tag="JNZ89_004010"
     CDS             2242..2508
                     /gene="minE"
                     /locus_tag="JNZ89_004010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HAY8937708.1"
                     /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK
                     DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK"
     gene            complement(2987..3106)
                     /locus_tag="JNZ89_004011"
     CDS             complement(2987..3106)
                     /locus_tag="JNZ89_004011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HAY8937709.1"
                     /translation="MPLSYAGYHHFIMMSLVSGEHNTPALSLQDESPGLVPAG"
     gene            complement(3067..3252)
                     /locus_tag="JNZ89_004012"
     CDS             complement(3067..3252)
                     /locus_tag="JNZ89_004012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937710.1"
                     /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYLKRVIFYPTTLQR
                     TAFKKCLFLMRDIIISS"
     gene            3353..3526
                     /locus_tag="JNZ89_004013"
     CDS             3353..3526
                     /locus_tag="JNZ89_004013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937711.1"
                     /translation="MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIED
                     EIIVRATYLIPDI"
     gene            3588..3872
                     /locus_tag="JNZ89_004014"
     CDS             3588..3872
                     /locus_tag="JNZ89_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HAY8937712.1"
                     /translation="MADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEK
                     GRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK"
     gene            3876..4211
                     /locus_tag="JNZ89_004015"
     CDS             3876..4211
                     /locus_tag="JNZ89_004015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmgD family protein"
                     /protein_id="HAY8937713.1"
                     /translation="MMMKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEM
                     AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAID
                     DTMRAIGKK"
     gene            complement(4268..>5838)
                     /locus_tag="JNZ89_004016"
     CDS             complement(4268..>5838)
                     /locus_tag="JNZ89_004016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY8937714.1"
                     /translation="LVNNTGGDLNIISSDSILNGATKLVSGTTTLKLSENTIWNMKDD
                     SVVTHLTNSDSIINLSYDDGQTFTQGKTLTVKGNYVGNNGQLNIRTVLGDDKSATDRL
                     IVEGNTSGSTTVYVKNAGGSGAATLNGIELITVNGDESPAEAFRQGDARIAAGAFEYQ
                     LKQQGKNWYLTSYQSVNEEDNSSEGNSEPTETPTPVLRPEAGSYVANLAAANTLFVMR
                     LNDRAGEMRYIDPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGADLLT
                     GGFTDSDSWRLGVMAGYARDYNSTHSSVSDYRSKGSVRGYCAGLYATWFADDISKKGA
                     YIDAWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQ
                     PQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPF
                     VEMNWIHNSKDFAVSMNGVKVEQDGASNLGEIKLGVNGNLNPAASVWGNVGVQLGDNG
                     YNDTAVMVGLKYKF"
BASE COUNT         1595 a         1351 c         1352 g         1540 t
ORIGIN      
        1 cgccgagata tttccttgtt aactctgggg aaataccatc tgagttcaca caaatatacg
       61 ggtcgcaaac aacgccgcac gccggagatt gaagtccgcc agcgtcatgt ccagacgcca
      121 ttgatgagaa catcatcccc acacctgaca atccgatata aaaaatacgc atcatattca
      181 tagcacatcc tgataatcca accgtacaac acttatgctc atttcatcat caatccgtaa
      241 tcaaaaccgc tgacctggac gagttacgat gacctgacag aagtatcaga cgtcttctgc
      301 ggtttctatg attatgatag agcaattcta tggcggatat taagataacg ggtatctgtt
      361 ctttaatgat gctgcaaaaa atggaaagtt aagaaagcct ggcgtggtga aaaaatacac
      421 ttgcctcaat actggatatt taaacaggtc tggagatgct gtcacgatta gggtgcggaa
      481 aaaggaagcg taaataagaa caatcaaaag tacgacggca atgggttgat tgacaagggt
      541 attttttaag ctatgaatca gcgccattta tcacagaata gacttttact ctgaataaat
      601 gggagggtga cttgcctcaa tataatccag actataacat gccttatagt cttcggaaca
      661 tcatcgcgcg ctggcgatga ttaatagcta attgagtaag gccaggatgt caaacacgcc
      721 aatcgagctt aaaggcagta gcttcacttt atctgtggtt catctgcatg aggcagaacc
      781 taaggttatc catcaggcgc tggaagacaa aatcgctcag gcccccgcat ttttaaaaca
      841 tgcccccgtt gtactcaacg tcagtgcact ggaagacccg gtaaactggt cagcgatgca
      901 taaggcggtg tcggcaaccg gtttgcgggt tattggcgta agtggctgca aagatgcgca
      961 acttaaagcc gaaattgaaa agatggggct gcctatcctg acggaaggaa aggaaaaagc
     1021 gccgcgtcca gctcccgcac cacaggctcc agcgcaaaat acaacgccgg tcacaaaaac
     1081 gcgtttaata gataccccgg tgcgttccgg tcagcgtatt tatgctccac aatgtgatct
     1141 gattgttaca agccacgtta gcgctggggc cgaattgatt gccgatggga acattcatgt
     1201 ctatggcatg atgcgcggtc gtgcgcttgc aggggcaagt ggtgaccggg aaacgcaaat
     1261 attttgtacg aacctgatgg cggaactggt gtccatcgca ggtgaatact ggctgagtga
     1321 tcaaatccca gcagaatttt atggcaaagc ggcgcgactg cagttagtcg aaaacgcttt
     1381 gaccgttcaa ccgttaaatt gatccctttt taacaaggaa tttctatggc acgcattatt
     1441 gttgttactt cgggcaaagg gggtgttggt aagacaacct ccagcgcggc catcgccact
     1501 ggtttggccc agaagggaaa gaaaactgtc gtgatagatt ttgatatcgg cctgcgtaat
     1561 ctcgacctga ttatgggttg tgaacgccgg gtcgtttacg atttcgtcaa cgtcattcag
     1621 ggcgatgcaa cgctaaatca ggcgttaatt aaagataagc gtactgaaaa tctctatatt
     1681 cttccggcat cgcaaacacg cgataaagat gccctcaccc gtgaaggggt cgccaaagtt
     1741 cttgatgatc tgaaagcgat ggattttgaa tttatcgttt gtgactcccc ggcagggatt
     1801 gaaaccggtg cgttaatggc actctatttt gcagacgaag ccattattac caccaacccg
     1861 gaagtctcct cagtacgcga ttctgaccgt attttaggca ttctggcgtc gaaatcacgc
     1921 cgcgcagaaa atggcgaaga gcctattaaa gagcacctgc tgttaacgcg ctataaccca
     1981 ggccgcgtaa gcagaggtga catgctgagc atggaagatg tgctggagat cctgcgcatc
     2041 aaactcgtcg gcgtgatccc agaggatcaa tcagtgttgc gcgcctctaa ccagggtgaa
     2101 ccggtcattc tcgacattaa cgccgatgcg ggtaaagcct acgcagatac cgtagaacgt
     2161 ctgttgggag aagaacgtcc tttccgcttc attgaagaag agaagaaagg cttcctcaaa
     2221 cgcttgttcg gaggataagt tatggcatta ctcgatttct ttctctcgcg gaagaaaaac
     2281 acagccaaca ttgcaaaaga acggctgcag attattgttg ctgaacgccg tcgcagcgat
     2341 gcagaaccgc attatctgcc gcagttgcgt aaagatattc ttgaggtcat ttgtaaatac
     2401 gtacaaattg atcctgagat ggtaaccgta cagcttgagc aaaaagatgg cgatatttct
     2461 attcttgagc tgaacgtgac cttaccggaa gcagaagagc tgaaataagc ccgctgtaaa
     2521 aacgcattta tcttcaaggc agagtcattt ctgccttgag tttttcatcc ctctcatcca
     2581 cgttgtggta aagcggcgag tattcttgct gatactcctc attgctattt ccacctcccc
     2641 ctttacacct taaggctgtt cccacgcaca gaacaaaatg tttatgcctg gttgagtaaa
     2701 taacctcatt gttagtgtgg atacactggg ggatgataac cccgcaattt cattattcat
     2761 tgttctccca taggatgagg tttcccgccg taactggcgg gctttttttg ccccagaatt
     2821 ttccctttta gccccctgta aacgaaaact gcgccgaagc gcagtttaat cgttgatggt
     2881 cagaacgacc agttcacgat atatactgcg ggtatcgact gatttcgatt ccatgccatt
     2941 ggataaatga tagtagcgtc taagtgacct aagctctgct gcaacatcag cccgcaggca
     3001 ccagaccagg ggattcatcc tgaagagaca gcgcaggtgt attgtgttca ccactcacca
     3061 aagacatcat gatgaaatga tgatatcccg cataagaaag aggcattttt taaacgcagt
     3121 gcgctgaagt gtagttggat aaaaaatcac tcttttcaga taatactgtc gtacgcttat
     3181 ctttcgacaa tgaggccgtc ggcaaaataa aatgactaat gtaatcgttg ctgatgaata
     3241 tcttctgctc acataaaaat cacacaataa tattgataaa tcagattatc ttacctttac
     3301 aacattgcgt taacagtcaa tgacacttct tgaataaaaa tattgccaat caatgagtta
     3361 ttcctcattt aagattattc tcattcacgt aaaaaacata attcctatca tcacagccac
     3421 gctcattttg aattatctga ataatagcga gcgttcttta gttaagcaga tcttaattga
     3481 agacgaaatt attgtgcgtg caacttactt aataccggac atctaagttg aagaaaaaaa
     3541 tacttgcctt cgggcttatc tcagcattgt tctgctccac gccagcgatg gcggatatga
     3601 atcgcaccac gaaaggtgca ttgctaggcg caggcgttgg tttacttact ggcaatggtg
     3661 ttaatggcgt actgaaaggt gcagctgttg gcgctggtgt tggtgcagta acagaaaaag
     3721 gccgcgacgg taaaaatgcg cgtaaaggtg caaaagtagg tgccgccgtt ggtgctgtca
     3781 ctggcgttct gaccggcaat ggcctcgaag gggcgattaa aggtgccgtg attggcggta
     3841 cgggtggtgc aattctgggt aaaatgaaat aaggaatgat gatgaaaaaa tttgctttac
     3901 tggcgggcct gtttgttttc gcaccaatga cctgggcgca ggactacaat attaaaaacg
     3961 gtttaccgtc agaaacctat attacttgcg cagaagccaa cgaaatggca aaaactgaca
     4021 gcgcacaggt tgcagaaatt gttgcggtaa tgggtaatgc cagcgttgcc agccgtgatt
     4081 taaaaattga gcaatctccg gaactgagcg ccaaagtggt agaaaaactg aatcaggttt
     4141 gcgctaaaga cccgcaaatg ctgttgatca cggcaattga tgacaccatg cgtgctatcg
     4201 gcaaaaaata atatttcata tgtaccgcgt cgatgaatac gacgcggttt tttagctaac
     4261 ggcgggatca gaacttatat ttcaggccca ccatcactgc ggtgtcattg tagccattat
     4321 cacccagctg cacgcccaca ttcccccaga cgctggccgc tggattcagg ttgccattta
     4381 cgccaagttt aatttccccc aaattactcg ccccatcttg ttcgactttc acaccgttca
     4441 ttgagacagc aaaatcttta ctgttatgga tccagttcat ttcaacaaaa ggttcaaagt
     4501 cgtcaccgtg cggaccgctg tttttctcct gagtacgaat aaaggtgcgg aaaccaagtc
     4561 gggtctggat gttgttattt gcgtcattct caatacgtga gccattggct tcggtgtgcg
     4621 cattatgatc gacgcccatc cagatagcct gtgcctgtgg ctggaatatc cacgtgtatt
     4681 tcgccgcttc cagaccaaag gatttattca gggcaaagcc gtaacccgct tccagcgaga
     4741 cggttgcgcc tttcgcacta taggattcat aggctaattc atcccctttc accgagtttt
     4801 taaaccagct atattgcgcc caggcgtcaa tgtatgcgcc ttttttactg atgtcatcgg
     4861 caaaccaagt ggcatacagc cctgcgcaat agcctctgac actccctttc gaacgataat
     4921 ccgacacgct ggaatgagtt gagttgtagt cgcgggcata accagccatc actcccaaac
     4981 gccaactgtc actgtcggta aaaccaccgg ttaacagatc ggcccctaac tgcgagacgt
     5041 agcgatgcga ggtcgttctc aactgtccgt tgctgtcacg ccaggcatta tgcccgccaa
     5101 tttgacgtag ccaaagtcgg cttgaacgct cctgttcagt tacaggatcg atgtagcgca
     5161 tttcacccgc acggtcgttc agacgcataa caaaaagagt gttagcggct gccaggttgg
     5221 cgacgtaact tccagcttcg gggcgcagga cgggggtagg cgtttctgtt ggttctgaat
     5281 ttccctctga gctgttatcc tcctcattca ctgactgata acttgtcaaa taccagtttt
     5341 tgccttgttg ttttagttga tattcgaaag ctccagctgc aatccttgca tcaccttgtc
     5401 tgaaggcttc tgctggagat tcatcgccat tcacagttat gagttcgatc ccgtttagcg
     5461 tggccgcgcc gcttcctcca gcatttttca catagacggt agttgaaccc gaagtattac
     5521 cctcaacaat aagtctgtcc gtagccgatt tatcatcacc taatacggtg cggatattaa
     5581 gctgaccatt attaccgaca taattacctt ttacggttaa tgtttttcct tgggtaaatg
     5641 tttgaccatc atcatacgaa agattgataa tactgtctga attagtcaga tgggtaacaa
     5701 cggagtcatc tttcatattc cagattgtat tttctgaaag cttcagcgtg gttgtgccgc
     5761 taacgagttt agtcgctcca tttagaatag agtcggacga aattatgttt aagtcacctc
     5821 cagtattatt aaccagaa
//
LOCUS       DADMIB010000216         5812 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.218, whole genome shotgun sequence.
ACCESSION   DADMIB010000216 DADMIB010000000
VERSION     DADMIB010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5812
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.218"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..853
                     /gene="pdeC"
                     /locus_tag="JNZ89_004017"
     CDS             <1..853
                     /gene="pdeC"
                     /locus_tag="JNZ89_004017"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HAY8937715.1"
                     /translation="ALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYYQ
                     PIIDIKTEKCIGAEALLRWPSEQEQVMNPAEFIPLAEKEGMIEQVTNYVIDNVFRDLG
                     DYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVEKM
                     TPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIAE
                     HIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLPA
                     RELTRGQ"
     gene            complement(856..1179)
                     /gene="soxS"
                     /locus_tag="JNZ89_004018"
     CDS             complement(856..1179)
                     /gene="soxS"
                     /locus_tag="JNZ89_004018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide response transcriptional regulator
                     SoxS"
                     /protein_id="HAY8937716.1"
                     /translation="MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRT
                     VTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD
                     YRHRL"
     gene            1265..1729
                     /gene="soxR"
                     /locus_tag="JNZ89_004019"
     CDS             1265..1729
                     /gene="soxR"
                     /locus_tag="JNZ89_004019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HAY8937717.1"
                     /translation="MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSG
                     NQRRYRRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREEL
                     DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN"
     gene            2275..3624
                     /locus_tag="JNZ89_004020"
     CDS             2275..3624
                     /locus_tag="JNZ89_004020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY8937718.1"
                     /translation="MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVI
                     VVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG
                     QHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANG
                     VGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGL
                     IFDPNVHFSGVFGMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTI
                     RAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTG
                     LTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGL
                     VTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI"
     gene            3776..5425
                     /locus_tag="JNZ89_004021"
     CDS             3776..5425
                     /locus_tag="JNZ89_004021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HAY8937719.1"
                     /translation="MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWP
                     TFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGF
                     LIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGL
                     VSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEP
                     ATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWA
                     MLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGW
                     LWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFP
                     ARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAI
                     QKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAA
                     LRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ"
     gene            complement(5579..>5812)
                     /locus_tag="JNZ89_004022"
     CDS             complement(5579..>5812)
                     /locus_tag="JNZ89_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HAY8937720.1"
                     /translation="MFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFF
                     EEDCTSHTGMSQTEDNINAVAMKITADIMQHAD"
BASE COUNT         1258 a         1376 c         1602 g         1576 t
ORIGIN      
        1 tgcgttgccc gccggtattt tggggagtct tgttctgcta ttactctggc tacgtattcg
       61 acaaaactat ttgtctccca aacgcaaatt gcaacgcgct ctagaaaaac atcaactttg
      121 tctttattac cagccaataa tcgatatcaa aacagaaaaa tgtatcggcg ctgaagcgtt
      181 gttacgttgg cctagtgagc aggagcaagt aatgaatccg gcagagttta ttccgctggc
      241 agaaaaggag gggatgatag aacaggtaac taattatgtt attgataatg tcttccgcga
      301 tctgggcgat tacctggcaa cacatgcaga tcgctatgtt tctattaacc tgtcggcctc
      361 cgattttcat acgtcacggt tgatagcgcg aatcaatcag aaaacagagc aatacgcggt
      421 gcgtccgcag caaattaaat ttgaagtgac tgagcatgca tttcttgatg tcgaaaaaat
      481 gacgccgatt attctggctt tccgccaggc tggttacgaa gtggcaattg atgattttgg
      541 tattggctac tctaacttgc ataaccttaa atcattgaat gtcgatattt tgaaaatcga
      601 taaatcgttt gttgaaacgc tgaccaccca caaaaccagt catttgattg cggaacacat
      661 catcgagctg gcgcacagcc tggggttaaa aacgatcgct gaaggcgtcg aaactgagga
      721 gcaggttaac tggctgcgca aacgcggcgt gcgctattgc cagggatggt tttttgcgaa
      781 ggcgatgccg ccgcaggtgt ttatgcaatg gatggagcaa ttacccgcgc gggagttaac
      841 gcgcgggcaa taaaactaca ggcggtggcg ataatcgctg ggagtgcgat caaactgccg
      901 acggaaaacg cgggagaagg tctgctgcga gacataaccc aggtccattg cgatatcaaa
      961 aatcggacgc tcggtggtgc gcaactcaac ggcggccagt aacaggcgac gttggcgaat
     1021 gtaatcgcca agcgtctgat gcgtcaccgt gcggaacatt cgttgcaagt accactttga
     1081 atagcctgat ttttttgcga ctacatcaat gttaagcggc tggtcaatat gctcgtcaat
     1141 ccatgcgata agatcctgaa taattttctg atgggacata aatctgcctc ttttcagtgt
     1201 tcagttcgtt aattcatctg ttggggagta taattcctca agttaacttg aggtaaagcg
     1261 atttatggaa aagaaattac cccgcattaa agcgctgcta acccccggcg aagtggcgaa
     1321 acgcagcggt gtggcggtat cggcgctgca tttctatgaa agtaaagggt tgattaccag
     1381 tatccgtaac agcggcaatc agcggcgata tagacgtgat gtgttgcgat atgttgcaat
     1441 tatcaaaatt gctcagcgta ttggcattcc gctggcgacc attggtgaag cgtttggcgt
     1501 gttgccagaa gggcatacgt taagtgcgaa agagtggaaa cagctttcgt cccaatggcg
     1561 agaagagttg gatcggcgca ttcatacctt agtggcgctg cgtgacgaac tggacggatg
     1621 tattggttgt ggctgccttt cgcgcagtga ttgcccgttg cgtaacccgg gcgaccgctt
     1681 aggagaagaa ggtaccggcg cacgcttgct ggaagatgaa caaaactaaa gcgccacaag
     1741 ggcgctttag tttgttttcc ggtctttgtc tttctctcta tcccgctggt acacaggagg
     1801 gtttcccccg acgtcaacac acctcattcg agcacgtggt ggaggttccg gttggtgttg
     1861 atgctttaat tgtatgtcac cgacgtttct tcgccagtgt aaaagtatac tttttaaccg
     1921 caatattttt gtcatctcag acgatttttt atcgcaatcc tgaacggtat acggctcgat
     1981 aacgctgcaa tcttgcgcac cgacgataac gtttgcgcat caattgcctg ttttttcatc
     2041 gtcaagacaa taaaagagaa aaaagcagca aacttcggtt gaaaaagccg ctatgatcgc
     2101 cggataatcg tttgcttttt ttaccacccg ttttgtatgc gcggagctaa acgtttgctt
     2161 ttttgcgacg cagtaaattg tcgcaaacct ggagcaggaa gataacgttt cgctggcagg
     2221 ggattgtccg ccacgcatct tgacgaaaat taaactctca ggggatgttt tcttatgtct
     2281 acgccatcag cgcgtaccgg cggttcactc gacgcctggt ttaaaatttc acaacgtgga
     2341 agcactgtcc gtcaggaagt ggttgccggg ttaacaacgt ttctggcgat ggtctactcg
     2401 gtcatcgtcg ttccaggtat gttgggtaaa gcaggcttcc cgcctgcggc agttttcgtt
     2461 gcaacctgtc tggttgccgg actcggttct atcgtgatgg gtctgtgggc taatctgccg
     2521 ttggcgattg gttgcgccat ctccctgacg gcgtttaccg cattcagcct ggtgctgggg
     2581 caacatatta gcgtacctgt cgcgctgggt gccgtgttcc tgatgggtgt gctgtttacg
     2641 gtaatttctg ccacgggtat ccgtagctgg attttgcgca acttgccgca cggtgtggcg
     2701 cacggcacgg ggatcggtat cggtctgttc ctgctgctca ttgccgctaa tggtgttggt
     2761 ctggtgatta aaaacccgct tgatggtctg cccgttgcgc tgggtgattt cgcgaccttc
     2821 ccggtgatta tgtcactggt aggtctggcg gtgatcatcg gcctggaaaa actgaaagtc
     2881 cctggtggca ttctgctgac cattatcggt atctcaattg tcggtttgat cttcgatcct
     2941 aacgtccatt tctccggcgt tttcggcatg ccttcattga gcgatgaaaa cggcaattca
     3001 ctgattggca gcctggacat tatgggcgcg ctgaatcctg tagtcctgcc aagcgttctg
     3061 gcgctggtga tgacggcagt atttgatgcc accggaacta tccgtgccgt cgccggccag
     3121 gcgaacctgc tggataaaga tgggcagatc atcgacggtg ggaaagcact gaccactgac
     3181 tccatgagca gcgttttctc tggcctggtg ggtgctgctc cggcagcggt atacatcgag
     3241 tctgcggcgg gtacggcggc gggcggtaaa accggtttga cggctatcac cgttggcgtg
     3301 ctgttcctgc tgattctgtt cctctctccg ctctcttacc tcgttccggg gtatgcaacg
     3361 gctccggcgc tgatgtacgt tggcctgctg atgctgagca acgtggcgaa aatcgacttt
     3421 gctgattttg ttgatgcgat ggcgggtctg gttacggcgg tattcatcgt gctgacctgt
     3481 aacatcgtaa caggcatcat gatcggcttc gcgactctgg tgattggtcg tctggtttcc
     3541 ggcgaatggc gcaagttgaa catcggtacg gtcgttatcg ccgtggcgct ggtgaccttc
     3601 tatgcgggtg gctgggctat ctaatctttc atcggattct gaaaacgggt ggcaatggct
     3661 gcccgttttt attttctccg cacattgtgt gagcttttgc gatattctga aaaaatgaga
     3721 attcaggcat aacgcctttc tcagatcata aaaaaacatc gcaaacaggg aacgcatgga
     3781 aatcttcttc accatactga taatgaccct cgtggtctcg ctgtccgggg tggtcactcg
     3841 tgtcatgccc tttcagatcc cgcttccgct tatgcaaatc gccatcggtg cgctactggc
     3901 gtggccgacg tttggtttgc atgtggagtt tgatcctgaa ctctttttag tcttgtttat
     3961 cccgccgttg ctgttcgctg atggctggaa aacgccgacc cgtgaatttc tcgaacatgg
     4021 tcgagagatt ttcggcctcg cgctggcgct ggtggtggtc accgtggtcg gcattggctt
     4081 ccttatttac tgggtggtgc cgggcattcc gctgatcccc gcctttgcgc tggcggcggt
     4141 actttctccg accgatgctg tggcgctctc cggaattgtt ggcgaagggc gcatcccgaa
     4201 aaaaatcatg ggcattttgc agggcgaagc gttgatgaat gacgcctccg gcctggtgtc
     4261 gttgaagttt gccgtggcag tggcgatggg gacgatgatc ttcaccgtcg gcggtgcgac
     4321 ggtcgaattt atgaaagtag ccattggtgg tattcttgcc ggttttgtgg tgagctggct
     4381 gtatggtcgc tcgctgcgat tcctcagccg ctggggcggt gatgaacccg cgacgcagat
     4441 cgttctgctg ttcttgctgc cattcgcttc ttatctgatt gccgaacata ttggcgtttc
     4501 cggcatcctc gctgcggttg ccgccgggat gaccatcacc cgctccggtg tgatgcgccg
     4561 tgcgccgctg gcaatgcgcc tgcgcgcaaa cagcacctgg gcgatgctgg aatttgtctt
     4621 taacggcatg gtgttcctgc tgttaggtct gcagctgccg ggtattctgg agacgtcgct
     4681 gatggcggca gaaatcgacc ctaacgtcga aatctggatg ctgtttaccg atattattct
     4741 gatatatgcg gcgctgatgc tggtccgttt cggctggctg tggacgatga aaaagttcag
     4801 caaccgcttc ctgaagaaga agccgatgga gtttggttcg tggaccacac gagaaatcct
     4861 gatcgcgtct ttcgccgggg tgcgtggggc gatcactctg gccggtgtgc tctctatccc
     4921 gctgctcttg ccggatggta acgtcttccc ggcgcgctat gagctggtgt tcctggcggc
     4981 tggcgtcatt ctcttctcgc tgtttgtcgg tgtggtgatg ttgcctattc tgctacaaca
     5041 cattgaagtc gcggatcatt cgcaacaatt gaaagaggaa cgtattgcgc gagcggcaac
     5101 ggcagaagtg gcgattgtgg cgatccagaa aatggaggag cgtctggcgg cggataccga
     5161 agagaatatc gataaccagc tgcttacgga ggtcagttct cgcgtcattg gtaacctgcg
     5221 tcgtcgcgcc gatggacgta acgacgttga aagttccgtg caggaagaga accttgagcg
     5281 tcgcttccgt ctggcggcat tgcgttctga acgtgctgaa ctgtaccacc tgcgcgccac
     5341 gcgggagatc agcaacgaaa cgctgcaaaa attactgcac gatctcgatt tgcttgaagc
     5401 gttgctaatt gaggaaaatc agtaagccga aagcgacgta accaggcccg aggtaatctg
     5461 aaaaaggtgc aatcttttgc acctttaaca ggttagctcg ggctaacatt catgattcta
     5521 aaacaaataa gttatctctc ttgtaaagtc aattcattgg ctgttcttcg acttaacctc
     5581 aatctgcgtg ttgcataata tctgcagtaa tcttcatagc gactgcatta atattatcct
     5641 cagtttgtga catgccagta tgagaggtac aatcttcttc aaagaatttc tgtagtgtta
     5701 ccagggtatc actatcaatg gggatatttt cctctccacg gagtatggaa atgcccattc
     5761 cctggacgct agcctcatca aaattaaccc gatagagacg ggtattaaac at
//
LOCUS       DADMIB010000217         5754 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.219, whole genome shotgun sequence.
ACCESSION   DADMIB010000217 DADMIB010000000
VERSION     DADMIB010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5754
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.219"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..392)
                     /locus_tag="JNZ89_004023"
                     /pseudo
     CDS             complement(1..392)
                     /locus_tag="JNZ89_004023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151035092.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
     gene            complement(578..3886)
                     /gene="icsA"
                     /locus_tag="JNZ89_004024"
                     /gene_synonym="virG"
     CDS             complement(578..3886)
                     /gene="icsA"
                     /locus_tag="JNZ89_004024"
                     /gene_synonym="virG"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane autotransporter IcsA"
                     /protein_id="HAY8937721.1"
                     /translation="MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLL
                     LGGPIAFAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSHAS
                     RTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGMILGGSGGSGA
                     DHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNGGNAVTGVNLPIINKGTIS
                     GGNGGNNYGEGDGGNGGDAITGSSLSVINKGTFAGGNGGAAYGYGYDGYGGNAITGDN
                     LSIINNGAILGGNGGHWGDAINGSNMTIANSGYIISGKEDDGTQNVAGNAIHITGGNN
                     SLILHEGSVITGDVQVNNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVS
                     GDVSFGENSSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFS
                     VSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKENAELTVST
                     ILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGFTNINAGILKMGTVEAMTRTA
                     GVIVNKGATLNFSGMNQTVNTLLNSGTVLINNINAPFLPDPVIVTGNMTLEKNGHVIL
                     NNSSSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEITGHASGITYVAVTNEG
                     GSGDKTLEGVQIISTDSSDKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMD
                     NQESKQMSNQESTQMSSRRASSQLVSSLNLGEGSIHTWRPEAGSYIANLIAMNTMFSP
                     SLYDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQIGGDILK
                     TNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLYSSWFQDEKERTGL
                     YMDAWLQYGWFNNTVKGDGLTGEKYSSKGITGALEAGYIYPTIRWTTHNNIDNALYLN
                     PQVQITRHGVKANDYIEHNGTMVTSSGVNNIQAKLGLRTSLISHSCIDKETLRKFEPF
                     LEVNWKWSSKQYGVIMNGMSNHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNS
                     YRDTQGILGVKYTF"
     gene            4415..5617
                     /gene="virA"
                     /locus_tag="JNZ89_004025"
     CDS             4415..5617
                     /gene="virA"
                     /locus_tag="JNZ89_004025"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858314.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-tubulin-specific protease"
                     /protein_id="HAY8937722.1"
                     /translation="MQTSNITNHERNDSSWMSTVKSTTEVSWNKLSFCDVLLKIITFG
                     IYSPHETLAEKYSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYL
                     DGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAIN
                     CCTSIIPNDDYFPVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLKLIADLINE
                     LGINEFIDSKKELQMLSYNQLNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTS
                     AFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVVPKNDTAI
                     SASGGRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVS
                     FAIISPDV"
BASE COUNT         1780 a         1300 c          951 g         1723 t
ORIGIN      
        1 caggctgtac gcttccccat gtgatttgcc tcgccacttc accgggctca ggaccccgta
       61 ggatcttcac cgaaaaaaat gcatcaccag ttgctttatt atttgtttta ggtagacctg
      121 ttactaattt atacctactc tgaccaagtc tggataagaa aggcacacct gcacatttct
      181 acttggaaat gttttctttt accattttgc tcaaaaattt caacatccaa tattcctcgt
      241 acagaactac tcaagtcctg aatagaaaaa gttccagctg gtacagtaga gtcatatatt
      301 gctcgacctt gttgagatac aacaacacgt gcattagttt ctgcaatacc agtaatctga
      361 ggcgcataac cacgaatatt tggcggtagc attcgttcat cgctttctaa tgcaattcct
      421 gtgtaacgcc aagcaacagc gcattctggc gcatgatctg gtaaacacgt ttggcattga
      481 tcgcaggcat accatcatgt gcacaaaaac ccaccgagct tttacacggt gggtcccaga
      541 gaaatgcagg acatcaacac gccctgcatt tttattatca gaaggtatat ttcacaccca
      601 aaataccttg ggtgtctctg taactgttat tacccaattg ctgagatacg tttccccaga
      661 tgcttaggtt atctgcaaga cgccccccca caccagtttt gagttcaatc acattacggt
      721 tgcctatctg gtgatttgac atgccattca taattacacc atattgcttt gagctccatt
      781 tccaattcac ttccaaaaat ggttcgaact tacgaagagt ctccttatcg atacaactat
      841 gactaattaa ggatgtacgc aatcccaatt ttgcttgaat attattgacc ccagaggatg
      901 tgaccatagt gccattgtgt tcaatatagt cgtttgcttt taccccatgc ctagttatct
      961 ggacttgtgg attgagatac aatgcgttgt caatattatt atgagtagtc cagcgtatgg
     1021 ttgggtagat atagccagct tccaaagctc ctgttattcc tttgctggaa tatttctcac
     1081 cagttaaccc atctcctttg actgtattat taaaccaacc gtactgcaac caagcatcca
     1141 tatatagacc tgttcgttct ttttcatcct gaaaccaaga actgtacaaa ccggcagtat
     1201 aaccgctcac agttcctcgt gaactataac tagtatactt attatgagtt ttgctatcct
     1261 gatatccata agctcccata atacccacat gcaagccatc atgatcagtg aagtttgtct
     1321 tcaaaatatc tccaccaatc tgataaacca tcctgttagc tgtggttttt aattgtctat
     1381 cagctaaatt atgctcatta tgtccaccaa cagtacgaat ccacatggtg gtttcgctga
     1441 gctgacctgt agtaggatca acaatagtgc taccgtgtcg gtcatagaga gaaggactaa
     1501 acatcgtgtt cattgctatc aggttagcaa tataactgcc agcttcaggg cgccatgtgt
     1561 gaatactacc ttcacccaaa ttaagtgaag atacaagctg tgaactagct cggcgactac
     1621 tcatttgagt agactcttga ttgctcatct gttttgattc ttgattatcc atctgactag
     1681 ttagatacca cttattggta ttcagtccag atacagtgcc ctgtttcagg cgatagtcat
     1741 aactaccagc aacaatacgg cctttctgaa taaaagcatt cttatcagaa gaatctgtcg
     1801 aaataatttg aacaccttca agagttttat ctccagagcc tccctcattt gtcactgcaa
     1861 cataggtaat accagacgca tggcctgtaa tttccagccg gtcagtttta ctgttgtcat
     1921 tgccgagaac cgcgcccaaa gataatattc cgccctttcc atgccaatta cctttctgaa
     1981 cataggtctg accgacattt gacgaactat tattgagaat aacatgaccg tttttctcca
     2041 gagtcatgtt acctgtgaca atgacggggt caggcaaaaa aggggcatta atattattga
     2101 ttagcacagt cccactattt aataaagtgt taacagtttg gttcatgcct gaaaaattca
     2161 aggtagcacc tttattaaca ataacaccag cggtacgtgt catagcttca actgtcccca
     2221 tttttagaat gcctgcattg atgttggtga aaccagagta ggtatttttt tccgccaaaa
     2281 tgagagttcc ctcccctgat tttgttaggg attttccgtc ccagctattt atattatgat
     2341 ggctgagatt atctgccaga atagtactaa cagtaagttc agcgttttct ttcagattga
     2401 actctccatg actgtcgcca tctgtatcat tccagctcaa accgtagatc aatttattct
     2461 ggtcactgat atagcttttt gtatagtcaa tagcaccagt agtgagtaac ggattgatga
     2521 tagatatatt agaaacactg aaacctgtta tccctttatc tgcacttagc agtttatagt
     2581 ccttctgcgc ccagttattt ataatagctt ccacttttac attgttgcca aatgacatat
     2641 ttccagaagc ttccagacta ctgattccag ctaaatttaa agaactgttc tcaccaaaag
     2701 aaacgtcacc tgaaacagtg aatttgttac ctgatagtga aacagttgta caatcaccag
     2761 cacataaatc accttcaata gttggtgtgg tcccagtgta atcattgttg ataattttca
     2821 gaatggatga attgttaacc tgtacatcac cagtaatgac agaaccttca tggagtatta
     2881 atgaattgtt tccaccagtg atgtggatag cattacctgc tacattttgt gttccatcat
     2941 cttctttacc tgaaattata tatccgctat tagcaatggt catattacta ccatttatag
     3001 catcccccca atgtccacca ttaccgccta aaatagctcc attgttgatt atagacaggt
     3061 tatctcctgt gatagcatta ccaccgtagc catcataacc ataaccgtaa gcagcacctc
     3121 cgttgcctcc agcgaacgtg cccttattga ttacagagag gctgcttcct gtgatggcat
     3181 cacctccatt accgccatca ccctcaccat aattgttacc tccattacca ccggaaatag
     3241 tccctttgtt gattatgggt agattgactc ctgtgacggc attacctcca ttccccccat
     3301 cactatcact ataactatcg ccaccatgtc cacctgaaat aatttctcca tttattataa
     3361 acagattgtc tcctgtaaca gcctcaccac catcaccgtt atggtcagca ccgctaccgc
     3421 cgctaccacc aagaatcatg ccttgattga ttatagacaa gtcagatccg gtaatagagt
     3481 caccaccatt accgccacaa ctattaccat cattattatc accagcacca ccatgacctg
     3541 cgctaatcat aatatcagag ttaatccgta gcttagttct agatgcatga gaggggttgg
     3601 aagaagttat ataccacgca tccattccat cttcaccagc tcccaaggga gaaagtccat
     3661 caacaggtgt taataatttt tcataattgt cctctgaaaa atgaagttct tgagtacccg
     3721 aaagaggaat agcaaaagct attggccccc cgagcaacag ggatgcacca acaacaaaag
     3781 gagaaaaaga caatttgcat gttttttcct ttaccgtagg taattctccg gcccccccct
     3841 gtgaacattg ggtcatatta caaaaaaatt tgtgaatttg attcatgcac tatattatca
     3901 gtaagtggtt gataaacccc taaaaagatt ccgttttatc cggaataaag ggacgatata
     3961 tgcaaaaaca tattaaacaa agcctcaacc aaaacatgag agctgtgtta tatatcaatg
     4021 caacgggaga aatttacctg tgtcttgctt tgaaaaaaag agggggaaag ctatatgttc
     4081 gataataaat taataatttt actatgatag tctgcttcag accgcaactt ttcagttctt
     4141 tctgtacgct tgcccaaagt ttaaccactt tgtttttcta tacacccaat ggttctatct
     4201 gccccttgat gttaatcccc aaagccaata acatgaatgt attcatatca caactttcct
     4261 accagactct ccaatgcaat aactgcataa ttgtttttag tggaaatgta tcgttttctt
     4321 aaagagaaga ataacattcc attttattat gttcccaatt taattatatt aatatatatt
     4381 ggcatcaata ggaaaataca tcaggagaaa tcaaatgcag acatcaaaca taactaacca
     4441 tgaaagaaat gactcatcat ggatgtcaac tgtcaaatca actacagaag taagttggaa
     4501 taaattgagt ttttgtgacg ttttactgaa aataataact ttcggaatat attctccaca
     4561 cgaaactcta gccgaaaaat atagcgaaaa aaaactaatg gatagtttct caccatcact
     4621 atcacaagat aaaatggacg gagagtttgc ccacgcaaac atagatggca tttcaatacg
     4681 gctatgcctt aacaaaggca tatgttcggt tttttatctt gatggagata aaatacaatc
     4741 cactcaactt tcatcaaaag aatataataa cttgttaagt tcactccccc ccaaacaatt
     4801 caacttagga aaagtacata ctattacagc tccggtatca gggaatttta aaactcacaa
     4861 gcctgcacca gaagttattg aaacagccat taattgctgt acatcgataa taccaaacga
     4921 tgattacttt cccgttaaag acactgattt taatagtgtt tggcatgata tttacagaga
     4981 tattcgagca tctgacagca atagtacaaa aatatatttc aacaatattg aaataccact
     5041 aaaattaatt gcagatctaa ttaatgagtt aggaattaat gaattcattg atagcaaaaa
     5101 agagcttcaa atgctaagtt acaaccaatt aaataaaata atcaattcaa acttccccca
     5161 acaagaccta tgttttcaaa cagaaaaact tttgtttact tcactctttc aagaccctgc
     5221 atttatatcc gcactaacat ctgcattctg gcaatctctt cacatcacgt cttcctctgt
     5281 ggaacacata tatgcccaaa ttatgtccga aaacatagaa aacaggctta atttcatgcc
     5341 tgaacaacga gttattaaca attgtggaca tattataaaa atcaacgcag ttgtccctaa
     5401 aaacgacact gcaatctctg cctctggggg gagggcttac gaagttagct catcaatatt
     5461 accatcgcac ataacatgta atggtgttgg tattaataaa atagaaacaa gctatctcgt
     5521 tcatgctgga acacttccaa gcagtgaagg gcttcgcaat gctatccctc cagaaagtcg
     5581 tcaagtatca tttgccatca tatctcctga tgtttaagcc aatattatat tggctgccag
     5641 actgtaaaaa aacgttcttc agaacagctc tataaactat taaaccaaag ctaaaaggat
     5701 ggggaccaat agaatctcag cccatccttt ttatatcatt atgaaccgcc ccgg
//
LOCUS       DADMIB010000218         5680 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.220, whole genome shotgun sequence.
ACCESSION   DADMIB010000218 DADMIB010000000
VERSION     DADMIB010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5680
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.220"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            29..1414
                     /locus_tag="JNZ89_004026"
     CDS             29..1414
                     /locus_tag="JNZ89_004026"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000398460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY8937723.1"
                     /translation="MEGGWNEGGKGISIADVMTAGAHGVPREVTEGVIDGLNYPNHEA
                     IDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEPNEEGLQFYDDLFDECLKQ
                     GMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTVFTCYKEKVKYWMTFNEIN
                     NQVNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYELVASALAVQTGKSINPEFN
                     IGCMIAMYPIYPLTCVPNDMMMATKAMHRRYWFTDVHARGYYPQHMLNYFARKGFNLD
                     ITPEDNAILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVEPRDLVSNPYIDTSEWGWQ
                     IDPAGLRYSLNWFWDHFQLPLFIVENGFGAVDQRQADGTVNDHYRIDYFASHIREMKK
                     AVVEDGVDLIGYTPWGCIDLVSAGTGEMKKRYGMIYVDKDNEGKGTLERIRKASFYWY
                     RDLIANNGENI"
     gene            complement(1471..1689)
                     /gene="marB"
                     /locus_tag="JNZ89_004027"
     CDS             complement(1471..1689)
                     /gene="marB"
                     /locus_tag="JNZ89_004027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance protein MarB"
                     /protein_id="HAY8937724.1"
                     /translation="MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEQ
                     PPFDLNHMGTGSDKSDALGVPYYNQHAM"
     gene            complement(1721..2104)
                     /gene="marA"
                     /locus_tag="JNZ89_004028"
     CDS             complement(1721..2104)
                     /gene="marA"
                     /locus_tag="JNZ89_004028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707445.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     MarA"
                     /protein_id="HAY8937725.1"
                     /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
                     MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
                     PPHKYRMTNMQGESRFLHPLNHYNS"
     gene            complement(2124..2558)
                     /gene="marR"
                     /locus_tag="JNZ89_004029"
     CDS             complement(2124..2558)
                     /gene="marR"
                     /locus_tag="JNZ89_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance transcriptional
                     regulator MarR"
                     /protein_id="HAY8937726.1"
                     /translation="MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFK
                     VLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT
                     SGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLLKKVLP"
     gene            2770..3435
                     /gene="marC"
                     /locus_tag="JNZ89_004030"
     CDS             2770..3435
                     /gene="marC"
                     /locus_tag="JNZ89_004030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter MarC"
                     /protein_id="HAY8937727.1"
                     /translation="MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
                     LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP
                     EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP
                     PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK
                     TYH"
     gene            complement(3460..4650)
                     /gene="ydeA"
                     /locus_tag="JNZ89_004031"
     CDS             complement(3460..4650)
                     /gene="ydeA"
                     /locus_tag="JNZ89_004031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose MFS transporter"
                     /protein_id="HAY8937728.1"
                     /translation="MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFH
                     MQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFT
                     VLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIV
                     GQYFGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLT
                     VVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASAL
                     VSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVA
                     MALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLE
                     EQTQ"
     gene            complement(4800..5507)
                     /gene="yneK"
                     /locus_tag="JNZ89_004032"
     CDS             complement(4800..5507)
                     /gene="yneK"
                     /locus_tag="JNZ89_004032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HAY8937729.1"
                     /translation="MGRVFHTGVERVLFLFLNDFIEQFPMIHLGVPIKKAHTPHIEPL
                     PPDHHTAADYLRQFDLLVLNFISRGNFVILPRLWSNSEVHRWFVNKDPNLITAILDIT
                     DGELKEDLLQSLMDSLGSNKHVLPEVCICFLSLLAEQESPHFQDFFLFFANMLLHYHQ
                     FMNPNESDLNDVLMPASLSDDKIIKHMARRTLKLFVKNETPPKVTHEDLVKNRPRSPV
                     RPPIPATAKTPDLPERH"
     gene            complement(5456..>5680)
                     /gene="yneK"
                     /locus_tag="JNZ89_004033"
     CDS             complement(5456..>5680)
                     /gene="yneK"
                     /locus_tag="JNZ89_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001598467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HAY8937730.1"
                     /translation="TLYNEKVQFKLTYPVKNGRHKENIEFQVVINLNPIYLDNFRHDG
                     EINIFALPTQSLSLWGAYFTPASSVCSFCF"
BASE COUNT         1533 a         1255 c         1396 g         1496 t
ORIGIN      
        1 atggggcggc gcggtagccg cgcatcagtt ggaaggtggc tggaatgaag gaggaaaagg
       61 catcagtatc gctgatgtga tgactgctgg cgctcacggg gtgccgcgtg aagtgacaga
      121 aggcgttatc gacgggctta attatcccaa tcatgaagca attgattttt atcatcgcta
      181 taaaacagat attcagttat ttgccgagat gggattcaaa tgctttcgaa cttccattgc
      241 ctggacacga atctttccgc aaggtgacga acaggagccg aatgaagagg gtttacaatt
      301 ttatgatgat ctgttcgatg aatgccttaa gcagggaatg gaacctgtgg tgacgctttc
      361 acattttgag atgccttatc atctggtgac aaaatatggt ggctggcgaa accgtaaact
      421 gatcgacttt tttatccgct tcgcatcaac ggtcttcacg tgctataaag aaaaagtaaa
      481 gtactggatg acgtttaacg aaatcaataa tcaggtgaat ttcagcgaaa gcctgtgtcc
      541 atttactaat tccggtatct tgtattcgcc agaggaagat atcaatgagc gcgaacaaat
      601 aatgtaccag gcggtacatt acgagttagt tgccagtgcc ctggcggtac agactggaaa
      661 atcgatcaat cctgaattta acattggctg tatgatcgcc atgtatccca tctatcctct
      721 gacgtgtgta cccaacgata tgatgatggc cacgaaagca atgcatcgtc gttactggtt
      781 tactgatgtt catgctcgtg gatattatcc gcaacatatg ctgaattact ttgccaggaa
      841 aggattcaac ctcgatatca caccagaaga taacgcgatt cttgccagtg gttgtgtcga
      901 ctttatcggc tttagctact acatgtcttt tacgacacaa ttttcgcccg ataacccgca
      961 actggattat gttgaaccac gagatttggt cagcaaccct tatatcgata catccgaatg
     1021 gggatggcaa attgatccgg cagggctacg ttattcactc aactggttct gggatcattt
     1081 ccagttgccg ctgtttattg tcgaaaatgg atttggtgcg gttgaccaga gacaagctga
     1141 cggcacggtg aacgatcact atcgcattga ttactttgct tcccatattc gggaaatgaa
     1201 aaaagccgta gttgaagatg gtgttgactt aattggctac accccgtggg gctgcattga
     1261 cctggtttct gccggaacag gggaaatgaa aaagcgctac ggaatgattt atgtcgataa
     1321 agacaacgaa gggaagggaa cgctggaacg gatacgtaaa gcgtcgtttt actggtatcg
     1381 ggatctcatc gccaacaatg gcgaaaatat ttgagacttg aggaagatat tacggagatg
     1441 tcaggctctg tgatcagagc ctgacaataa ctacatagcg tgttgattat aatagggcac
     1501 gccgagcgca tccgacttat cactgccagt acccatgtga tttaaatcaa acggtggttg
     1561 ttcctgcgat gggggaacaa ccacgacatt ggcacaagaa gtaacaactg gctgcgtggt
     1621 ttgttccgca acgccctgcg cggaaaagag aataagcgca gctgctattg cggatgaaag
     1681 tggtttcatg attgcctcag tgacgttgtc acgttatcaa ctagctattg taatgattta
     1741 atggatgtaa aaagcgcgat tcgccctgca tattggtcat ccggtattta tgtggcggaa
     1801 catcaaagta atttttgaag gttcgggtca gagtttgttg cgactcgaag ccatatcgtt
     1861 ctgccagata gagtatcggc tcgttacttt ccttcagctt ttgcgcgatt tccgtcatct
     1921 tacggctgcg gatgtattgg cctaatgaat gaccggtttc ttttttaaac atccgttgca
     1981 ggtgccattt agagtaacct gaacgctctg acactttctc cagtgacagt ggcgattcca
     2041 ggttgtcctc gatccagtcc aaaatgctat gaatggtaat agcgtcagta ttgcgtctgg
     2101 acatcgtcat acctcttttt tgtttacggc aggactttct taagcaaatg ctcaagtgtt
     2161 gccacttcgt ccgccgtcag gttttttgtt aattcttgat gcaggtcctg gccaactaat
     2221 tgatggcatt gttcgcatat tgccgcgccg ctggtggtaa gttttaccag tacgccgcgc
     2281 ttatcattcg ggttcggcaa cctttcaacc cagcctttac agaccaggcg atccagcata
     2341 cgggtcagtg ctccaaggtc gacagacaac acttttttca gttcaaccgg agtaatacac
     2401 gccgcgcagc ggatagagca gagcacctta aactgtgccg cggtaatatc cagcggagac
     2461 agatactcgt taagcagacg atctttcttc tgattaacca tatggattaa gcgacccaat
     2521 ggaataattt cattgaacag atcgctggta cttttcacat tagttgccct ggcaagtaat
     2581 tagttgcagg gggtaatatt gcccaggcaa gtataagtca aataaatgaa ttgaccgatg
     2641 ccacgttttg ctaaatcggt tcaagttttg gtcaatgcga tgcaaggtta gctaaagagt
     2701 gacactttat ccttgtttac cccttatact tttcgctgat aatccagata cactggataa
     2761 caaccaccaa tgttagattt gtttaaagca attggcctgg ggctggtggt gttactgccg
     2821 ttagctaacc cattaacaac tgtcgcgtta tttcttggcc tggcaggcaa catgaacagt
     2881 gccgaacgta atcgtcagtc gttgatggcc tcggtgtacg tatttgccat catgatggtg
     2941 gcgtattacg ccgggcaact ggtgatggat acatttggca tttcgattcc cggtctgcga
     3001 attgcaggcg gcttaatcgt cgcgtttatc ggttttcgga tgctctttcc gcaacagaaa
     3061 gcgattgatt caccggaggc gaaaagcaag tcggaagagc tggaagatga acccagtgcc
     3121 aatattgcct ttgtgccgct agcaatgcca agtaccgctg gtccgggaac catagcgatg
     3181 attattagct cggcgtccac agtgcgtcag agttcaacct tcgctgattg ggtactgatg
     3241 gttgcgccgc cgctgatctt tttcctggtg gcggttattt tgtggggaag cctacgcagc
     3301 tccggcgcaa ttatgcggct ggtgggcaag ggtggcattg aagcgatctc ccgtctgatg
     3361 ggattcctgc tggtatgtat gggtgtgcag tttattatta acggcatcct ggaaatcatt
     3421 aaaacgtacc attaaaaaag gcccgaatgg gcctttcaac tattgcgtct gttcttcgag
     3481 tgtcactggc cagcggcgaa atataatgat tgaccatatt aacgcggcaa aagcaggcac
     3541 cgcgcccaca taaccaatca tcgacattga ccagtgcaaa ctcacctgat tacctaccaa
     3601 cgcacccgcc ccgattccaa tattaaatat gccggagaat agcgccatcg cgacgtcggt
     3661 agcatctggt gccagcgcca gcactttaac ctgcatacca agcccgatga tcatcatcgc
     3721 gatcccccag aaaatactca gcaccccgag gtgtatttca ctgttcgccg caggtagcag
     3781 cagtgccaga cacaccagca acagcgcaat cgccgtactc accaacgcag acgcatactg
     3841 attacccagt ttaccgaaaa tcacgctgcc aataatgccc gcaccaccga gtaataacag
     3901 taatgccgtg gcaaagttgg cgctgaatcc cgcaatgttt tgcacaaaag gctcgatata
     3961 gctgtatgcc gtgtaatggg cggtgacaac caccacagtt aacaaataaa tgctcatcaa
     4021 tgccgggcgg cggaacaata gcgggaggct tttcaatgaa ccggaatgct cactgggcag
     4081 taagggaagt aacttaatca ggcacaaaag ggtgataagc gccccaatac caatcgcgaa
     4141 gaaggtcatt cgccaaccga aatactgccc cacaatgcgc ccgagaggta aacctaagac
     4201 catcgccagt gctgtaccgg tggcaattaa actcaaggcc tgtgcccgct tcccggccgg
     4261 agccatacgg atcgccagag acgccgtaat cgaccagaaa atcgcatgtg caaaagccac
     4321 accaatgcga ctgatcacca gaacggtaaa gctccacgat aaaaacgaca gtacgtggct
     4381 ggcaataaac accacaaaca ggcagatcag taatttgcgc cgttcaacct gactggtcat
     4441 taacataaaa ggcaatgaca ttagcgctac tacccatgcg taaatggtca acatgatgcc
     4501 gacctgagcg gtttgcatgt gaaaactttg cgcaatgtca gagagcaggc caacagggac
     4561 aaattcggtg gtgttgaaga tgaaggcggc gactgccagc gtaacgaccc gtagccacgc
     4621 cactttgcgg gaaacagtgt ttgttgtcat aacagattat cgggtgagtt gcgaaaaagt
     4681 gatgaaatga tcttaaaacg gttaatgatg tgaatacaat gcatttgtga tctggatcgc
     4741 gttttccgtt tctctgacgc tgattctgtt ccgcgtcaga gagtcggtaa catcacggtt
     4801 taatgacgtt cagggaggtc tggcgttttg gcggttgcgg gtataggtgg tctgacaggg
     4861 gagcgaggcc tgtttttcac caggtcttcg tgagtaactt ttggcggcgt ttcatttttt
     4921 acaaacagtt tgagggtcct gcgcgccata tgcttgataa ttttatcatc acttaatgat
     4981 gctggcatca acacgtcatt cagatcactt tcattgggat tcataaattg gtgatagtgc
     5041 aataacatat tggcgaaaaa taaaaaaaag tcctgaaaat gaggagattc ttgttctgct
     5101 aaaagggata aaaagcagat gcagacttcg ggtagtacat gtttgttaga acctaatgaa
     5161 tccatcaggc tttgcaataa atcctctttt aattcgccgt ctgttatgtc gagaatggcg
     5221 gtgatcaagt taggatcttt attgacgaac catctgtgaa cctcagagtt actccataat
     5281 cgggggagta tgacaaaatt accgcgagag ataaaattca ggacaagcaa atcaaactgg
     5341 cgtaagtaat ctgcagcggt atggtgatcc ggaggcaggg gttcaatatg tggtgtatgc
     5401 gcttttttga tggggacgcc aaggtggatc attggaaatt gttcaataaa atcattcaga
     5461 aacagaaaga gcacacgctc gacgccggtg tgaaatacgc gccccatagt gacaggcttt
     5521 gggttgggag cgcaaaaata ttaatttctc catcatggcg aaaattatct aaataaatag
     5581 ggtttaaatt tattactacc tgaaattcaa tattttcttt gtgtcttcca ttcttgacgg
     5641 gataagtgag tttaaactga accttttcat tgtatagtgt
//
LOCUS       DADMIB010000219         5680 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.221, whole genome shotgun sequence.
ACCESSION   DADMIB010000219 DADMIB010000000
VERSION     DADMIB010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5680)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5680)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5680
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.221"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(24..1952)
                     /gene="dhaR"
                     /locus_tag="JNZ89_004034"
     CDS             complement(24..1952)
                     /gene="dhaR"
                     /locus_tag="JNZ89_004034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase operon
                     transcriptional regulator DhaR"
                     /protein_id="HAY8937731.1"
                     /translation="MRDMSGAFNNDGRGISPLIATSWERCNKLMKRETWSVPHQAQGV
                     TFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSA
                     LGFHDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRL
                     TGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDG
                     VISWDEQGNLQFINAQAARVLRLDATASQGRAITELLTLPAVLQQAIKQAHPLKHVEA
                     TFESQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDD
                     PQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGD
                     AALAEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITR
                     LDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPAL
                     VNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSD
                     LPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTL
                     WRKMKQHGIDAGQFKRRV"
     gene            2171..3280
                     /gene="dhaK"
                     /locus_tag="JNZ89_004035"
     CDS             2171..3280
                     /gene="dhaK"
                     /locus_tag="JNZ89_004035"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HAY8937732.1"
                     /translation="MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG
                     KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLI
                     IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV
                     GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH
                     GEPGIDRRSFSSLDQTVDEMFDTLLGNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD
                     RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK
                     VDDETLALWDAPVHTPALNWDKLGESNVTEQNSNC"
     gene            3252..3884
                     /gene="dhaL"
                     /locus_tag="JNZ89_004036"
     CDS             3252..3884
                     /gene="dhaL"
                     /locus_tag="JNZ89_004036"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HAY8937733.1"
                     /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR
                     GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT
                     LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS
                     IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE"
     gene            3895..5313
                     /gene="dhaM"
                     /locus_tag="JNZ89_004037"
     CDS             3895..5313
                     /gene="dhaM"
                     /locus_tag="JNZ89_004037"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaM"
                     /protein_id="HAY8937734.1"
                     /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP
                     IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVE
                     GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV
                     VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI
                     AKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTL
                     TVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDYIAAIFSGHHTLLDDPELLAAASEL
                     LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ
                     FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL
                     YAIQPEETLTLDVKTQRFNRQG"
BASE COUNT         1423 a         1455 c         1400 g         1402 t
ORIGIN      
        1 gtattagaaa tcgtttctgt ctttcatacc cggcgcttaa actgccctgc atcaatgcca
       61 tgttgcttca ttttccgcca cagcgtagtg cggccgattc caagtaaagc cgacatttcc
      121 tgaatgcgac cgcctgtgac ctgggctgcg ttaataattg cctctttttc aacttccgca
      181 aatgacagac tggtggaaag gcgggtggcg ctgacatcat ctgttgcctg ctcggtaaac
      241 agatgttccg gcaaatcact gacgcgaatg cgcccattat cactactcag agcaagattc
      301 tcgatgacgc tgtaaagttc aaaatcgttg cctggccatg cacaagaaac caggcgagcg
      361 agggcatcgt catcaatttt cagccgcgta gagaagcgtt tttcaagact gcgtaatttg
      421 ttattcacca gcgccggaat gctgccacgc cgcatacgca gaggcgggat ggtaatttca
      481 aatgcatgca gcgcgtaata cagctggcga ctaaaacgat tttgttccac cagcattgcg
      541 aggtccgcgg tcgttgttgc aatcactttg acatcaattg gtattaaacg ccgcgcatcc
      601 agtcgcgtga taacaccctg cttgataacc tgaagcaaag cagactgtaa ctccaccgcc
      661 agatattcaa tcttttcaag aaacagcgtg ccgccgtgcg ccagttccag ccgactcaga
      721 cggccatttt cattgtccgt acgatcgcca ccaataaatt cttccgccag tgccgcatca
      781 ccatataact cacaattgac ggcgatataa ggacctgcag cacgctcgct ttcattatga
      841 attgcctgac ttagcagtgc cttgcccacg ccctcttctc cacaaagcag gacaggaaag
      901 ctactgcgcg ccgcctggcg accaaaatga atcaagcggc gggtttgcgg atcgtcctgt
      961 ggcatatgag caaaggtatg gctgactttt cctaattgac tggtcatcaa ctgccgcatc
     1021 tgttccacag gatggagcaa caaaataaag ctggttccct gcgtttctat tatcggttta
     1081 agggttatca ccgcatcaat aaactgatgc tgactttcaa aggttgcttc tacgtgtttg
     1141 agcggatgtg cctgttttat tgcttgttgc aatacggcgg gtaacgttaa gagttcagtg
     1201 attgcccgtc cctgacttgc cgtcgcgtca aggcgcaaga cccgcgccgc ctgggcattg
     1261 ataaattgca aattaccctg ctcgtcccag ctaatcacgc catcatccat actttctaac
     1321 agggcattaa gttgatttaa atgacggtta gtttcagcga gcaaactgtc cgtcagcagt
     1381 aaatttccga cctcgcgggc gattgccaac gtcaacggca aatcagctgc ggtagtttgc
     1441 tcaaccggac acgccagcgc tattgttccc gtcaatcggc ccttgctgtc aaacaacggc
     1501 gttgcacaaa aggcccagtt ccagagtgcc tgtttgaaat gttgatcggc catcgttttc
     1561 acggcctgac cagagatagc cgctaacgat agcgcacaag taccaataat tccctcggcg
     1621 caatacgtgc cgtcatggaa tccaagtgca cttagctgct gcaaggtttg cggatcgcca
     1681 ttacggctga gaatgcaggc ggtttcatcg aggataaaca gcgcacactc tcgcggtgcc
     1741 atatattccc aggcatcttc cagcgcagcc tgcccgagcg tcagcatcgc tttcttacgc
     1801 cgataaatag aagcaaatgt cacgccctgg gcctgatgtg gtacgctcca tgtctcccgt
     1861 ttcatcagct tattgcatcg ctcccaggag gttgcaatta agggagatat gccccgacca
     1921 tcgttgttaa aagcgccact catatcccgc atcccttatg acaaaaggtg ttccggctcg
     1981 caattttaag tattaataca cgtaaaagtt tcaatatgga acattcatta aagcatatgt
     2041 ttcactatga aacataattt gggctaattt tcttttccct tgcctgatgc acaatggatt
     2101 catcggcagt cagtggtcgc cgtgtcgttg aacatcatcc atgccctacc gtaattgctg
     2161 gagcaaaata atgaaaaaat tgatcaatga tgtgcaagac gtactggacg aacaactggc
     2221 aggactggcg aaagcgcatc catcgctgac actgcatcag gatccggtgt atgtcacccg
     2281 agctgatgcc cctgttgcag gaaaagtcgc cctgctgtcg ggtggcggca gcggacacga
     2341 gccgatgcac tgtgggtata tcggtcaggg gatgctttcg ggggcctgtc cgggcgaaat
     2401 tttcacctca ccgacgcccg ataaaatctt tgaatgcgcc atgcaagttg atggcggcga
     2461 aggtgtactg ttgattatca aaaattacac cggcgatatt cttaactttg aaacagcgac
     2521 cgagttactg cacgatagcg gcgtaaaagt gaccactgtg gtcattgatg acgacgttgc
     2581 ggtaaaagac agtctttata ctgccgggcg acgcggcgtt gccaacaccg tattaattga
     2641 aaaactcgta ggcgcagcgg cggagcgtgg cgactcactg gacgcctgtg cggaactggg
     2701 gcgtaagttg aataatcaag gccactcaat aggtatcgct ctcggtgcct gtaccgttcc
     2761 tgccgcgggc aaaccttctt ttaccctggc ggataatgag atggagtttg gcgtcggcat
     2821 tcatggtgag ccgggtattg accgccgctc cttctcttcc cttgatcaaa ccgtcgatga
     2881 aatgttcgac accctgctgg gaaatggctc ataccatcgc actttacgtt tctgggatta
     2941 tcaacaaggc agttggcagg aagaacaaca aaccaaacaa ccgctccagt ctggcgatcg
     3001 ggtgattgcg ctggttaaca atcttggcgc aactccgctt tctgagctgt acggcgtcta
     3061 taaccgcctg accacacgtt gccagcaagc gggattgact atcgaacgta atttaattgg
     3121 cgcgtactgt acctcactgg atatgaccgg tttctcaatc accttactga aagttgatga
     3181 cgaaacgctg gcactctggg acgccccggt ccacaccccg gcccttaact gggataaatt
     3241 aggagaaagc aatgtcactg agcagaactc aaattgttaa ctggctcact cgttgtggcg
     3301 atattttcag caccgagagc gagtatctta ccggactgga tcgcgaaatt ggcgacgctg
     3361 accacgggct aaatatgaac cgaggcttta gcaaagtggt ggaaaaactc cctgctatcg
     3421 cagataaaga tatcggtttc attctcaaga ataccggtat gacgctgctt tccagcgtcg
     3481 gtggtgccag tggtccgctg ttcggtacct tctttatccg cgccgcacag gcgacccagg
     3541 cacggcaaag cctgacactg gaagagcttt atcagatgtt ccgcgatggc gcggacggcg
     3601 taatcagtcg cgggaaagcc gaacctggcg ataaaaccat gtgtgatgtg tgggtgccgg
     3661 tggtggaatc gttacgtcag tccagcgagc aaaatctctc tgttccggtg gcgctcgaag
     3721 ctgccagtag catcgccgaa tccgctgcac aaagtacgat tacgatgcaa gcccgcaaag
     3781 gccgcgccag ttatctcggt gaacgcagta ttggtcacca ggatcccggc gcgacctcgg
     3841 tgatgtttat gatgcaaatg ttggcgttag ccgcaaaaga gtaaggaatt ggtgatggta
     3901 aacctggtca tagtttcaca tagcagccga ctgggagaag gtgtcggtga attagcccgt
     3961 cagatgttaa tgagtgatag ttgtaaaatc gccattgccg cgggaattga cgatccacaa
     4021 aatcctattg gtaccgatgc cgtcaaagtg atggaggcca tcgaatctgt tgctgatgcc
     4081 gaccatgtgc tggtcatgat ggatatgggt agcgcattat tgagtgctga aactgcgctg
     4141 gaattgctgg ctcccaagat cgccgcaaaa gtacgtttgt gtgctgcgcc gttggtcgaa
     4201 ggtacactgg cagcaacggt cagcgcggcc tcgggagcgg atatcgacaa agttatcttt
     4261 gacgctatgc atgcgctgga agccaaacgt gaacaactgg gtttaccgtc ctccgacact
     4321 gaaatctctg acacatgtcc tgcgtacgat gaagaagccc gttctctggc ggtggtcata
     4381 aaaaaccgta acggcctgca tgtacgtccg gcctcccggc tggtttatac cttatcgaca
     4441 tttaatgccg atatgttgct ggaaaaaaac ggcaaatgcg tcacaccaga gagtattaac
     4501 cagattgcgt tactacaagt tcgctataac gatacgctgc gcctgattgc gaaagggcca
     4561 gaagctgaag aggcactgat cgctttccgt cagctggctg aagataactt tggtgaaacg
     4621 gaggaagtcg ctccacctac tctgcgtccc gttccgcctg tttcgggtaa agccttttat
     4681 tatcaaccag ttttatatac ggtacaggca aaatcaaccc tgaccgtgga agaagaacaa
     4741 gatcgattac gccaggctat tgacttcacg ttattagatc tgatgacgtt aacagcgaaa
     4801 gcagaagcca gcgggcttga ctatattgcc gcaatctttt ctggtcacca tacactgtta
     4861 gatgatccgg aactgctggc ggcggcaagc gaactccttc agcatgaaca ttgcacggca
     4921 gaatatgcct ggcagcaagt tcttaaagaa cttagccagc aataccagca actggatgat
     4981 gaatatctac aagctcgcta tattgatgtg gacgatcttc tgcatcgcac cctggtccac
     5041 ctgacccaaa cgaaagaaga actcccgcag tttaactcgc caactattct actggcggag
     5101 aacatttatc cttccacagt actgcaactg gatccggcgg ttgtaaaagg tatctgcctt
     5161 agcgccggaa gtccggtatc ccacagcgcc ctaatcgccc gtgaactggg gattggctgg
     5221 atttgccagc agggtgagaa actgtatgcg atacaaccag aagaaacgct aacgctggac
     5281 gttaaaacgc aacgtttcaa ccgtcagggt taagccactg ttcggatggc atcgttctga
     5341 tgtcatccgg caatttactc agcactaatg gtttttaact acctgttata tttttcacca
     5401 atttatgatg atttttcttc gctaatcacg aacccaacgc cgctggctgg ctaataaaca
     5461 gacgttattt gatcactcta tttcgccgtt atttatccct ttaattccct tttctaaaat
     5521 gcctgacagt tcgcagaatg agatttcgat catgcagcta gtgcgatcct gaactaaggt
     5581 tttctgatac ttgaataccg ttttattcgg tttcgccaaa ggagaatgat tgatgaaatc
     5641 ccccgcacct tctcgcccgc aaaaaatggc gttaattcca
//
LOCUS       DADMIB010000220         5637 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.223, whole genome shotgun sequence.
ACCESSION   DADMIB010000220 DADMIB010000000
VERSION     DADMIB010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5637
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.223"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(4..79)
                     /locus_tag="JNZ89_004038"
     tRNA            complement(4..79)
                     /locus_tag="JNZ89_004038"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(44..46),aa:Val,seq:tac)
     gene            complement(126..201)
                     /locus_tag="JNZ89_004039"
     tRNA            complement(126..201)
                     /locus_tag="JNZ89_004039"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(166..168),aa:Val,seq:tac)
     gene            complement(246..321)
                     /locus_tag="JNZ89_004040"
     tRNA            complement(246..321)
                     /locus_tag="JNZ89_004040"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(286..288),aa:Val,seq:tac)
     gene            582..1997
                     /gene="gltX"
                     /locus_tag="JNZ89_004041"
     CDS             582..1997
                     /gene="gltX"
                     /locus_tag="JNZ89_004041"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HAY8937735.1"
                     /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT
                     DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK
                     ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI
                     EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK
                     APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI
                     FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT
                     RNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVR
                     DKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGR
                     TRSIERINKALAFIAERENQQ"
     gene            complement(2048..2419)
                     /locus_tag="JNZ89_004042"
     CDS             complement(2048..2419)
                     /locus_tag="JNZ89_004042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HAY8937736.1"
                     /translation="MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV
                     DTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGVRAPAYRQIINAIDNMTDIEQEKVA
                     QFLSREGIRNFLARLDIDESA"
     gene            complement(2442..2786)
                     /locus_tag="JNZ89_004043"
     CDS             complement(2442..2786)
                     /locus_tag="JNZ89_004043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HAY8937737.1"
                     /translation="MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHV
                     NEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGII
                     GLLQRLGIRDSK"
     gene            3022..3097
                     /locus_tag="JNZ89_004044"
     tRNA            3022..3097
                     /locus_tag="JNZ89_004044"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3055..3057,aa:Ala,seq:ggc)
     gene            3137..3212
                     /locus_tag="JNZ89_004045"
     tRNA            3137..3212
                     /locus_tag="JNZ89_004045"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3170..3172,aa:Ala,seq:ggc)
     gene            3421..5610
                     /locus_tag="JNZ89_004046"
     CDS             3421..5610
                     /locus_tag="JNZ89_004046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
                     /protein_id="HAY8937738.1"
                     /translation="MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL
                     AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA
                     ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA
                     DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS
                     WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN
                     YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL
                     PNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK
                     LYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET
                     LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA
                     QPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH
                     PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM
                     YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS
                     ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD"
BASE COUNT         1314 a         1360 c         1444 g         1519 t
ORIGIN      
        1 aagtggtggg tgatgacggg atcgaaccgc cgaccccctc cttgtaaggg aggtgctctc
       61 ccagctgagc taatcaccca cttcggtact tcacattgtt acaagaaatt tagctggtga
      121 gaaagtggtg ggtgatgacg ggatcgaacc gccgaccccc tccttgtaag ggaggtgctc
      181 tcccagctga gctaatcacc cacttctcaa tttcttgcta cacggcggag actacataaa
      241 gtagttggtg ggtgatgacg ggatcgaacc gccgaccccc tccttgtaag ggaggtgctc
      301 tcccagctga gctaatcacc cccccgctgt gtggagtcgc attataggga gagttcaaaa
      361 tgagtcaacg cattttctaa agaaattgtt cgttcgtcgt aaatttaagc aagatgatcg
      421 caaaatagac cgtgttgcgc aatttgtcaa cgaaaacaat aatgcgtaag gtagaaaccc
      481 gaactacatt gaggaatcag gcgggagtga tagaatatcg cccactcaat ttttccagga
      541 tttgccggtt gtcggcatct ttctaaacgt aaggccattt catgaaaatc aaaactcgct
      601 tcgcgccaag cccaacaggc tatctgcacg ttggcggcgc gcgtactgcc ctttactcct
      661 ggctttttgc acgtaaccac ggcggtgagt tcgtgctgcg tattgaagac accgatcttg
      721 agcgttccac gccggaagct atcgaagcca ttatggatgg catgaactgg ctgagcctgg
      781 agtgggatga aggtccgtac taccagacca aacgttttga tcgctacaac gcggtgatcg
      841 atcagatgct ggaagagggc actgcttata aatgctattg ctctaaagag cgcctggaag
      901 cgctgcgcga agagcaaatg gcgaaaggtg agaagccgcg ttatgacggt cgctgccgcc
      961 acagccatga gcatcacgct gatgatgaac cgtgcgttgt acgttttgct aacccgcagg
     1021 aaggttctgt tgtttttgac gatcagatcc gtggtccgat cgagttcagc aaccaggaac
     1081 tggacgatct tattattcgc cgtaccgatg gttccccaac ctataacttc tgtgtggttg
     1141 tcgatgactg ggatatggaa atcacccacg ttatccgtgg cgaagaccat atcaacaaca
     1201 cgccacgcca gatcaacatt cttaaggccc tgaaagcgcc ggtgccggtt tacgcgcacg
     1261 tttctatgat caacggcgat gacggtaaaa aactgtccaa acgtcacggg gcggtcagcg
     1321 taatgcagta tcgtgatgac ggttatttgc cagaagcact gctgaactat ctggtgcgtc
     1381 tgggctggtc ccacggcgat caggaaatct tcactcgtga agagatgatc aaatacttca
     1441 ccctgaatgc cgtcagcaaa tctgccagtg cgttcaacac cgacaagctg ctgtggctga
     1501 accatcacta cattaacgcg ctgccgccgg agtatgttgc tactcactta cagtggcaca
     1561 ttgagcagga aaatatcgat acccgtaacg gcccgcagct ggctgatctg gtgaaactgc
     1621 tgggcgaacg ctgcaagacg ctgaaagaga tggcacagag ctgccgttat ttctacgaag
     1681 attttgctga gttcgatgcc gacgccgcga aaaaacatct gcgtccggta gcgcgtcagc
     1741 cgctggaagt ggttcgtgac aaactggccg cgattactga ctggaccgct gaaaacgttc
     1801 atcacgctat tcaggcgacg gcggatgagc tggaagtggg tatgggtaaa gttggtatgc
     1861 cgctgcgtgt cgccgtaacc ggtgcggggc agtctccggc actggatgtt accgttcacg
     1921 caattggtag gacccgcagt attgagcgta tcaacaaagc gctggctttt attgctgaac
     1981 gcgaaaacca gcagtaatta gcgcataaaa gataaacggc aggagataat atcctgccgt
     2041 tttttattta tgctgattcg tcaatatcga gacgggcgag gaaattgcga attccttcac
     2101 gtgacaaaaa ttgcgcgact ttttcctgct caatgtctgt catattatct atcgcgttga
     2161 tgatttgtcg atacgccggg gcgcgtactc caggagcgta ttcagcaatt ctctcttcag
     2221 cttccatcaa cattggtgtg ttatggaagg ctggcgtgtt ctgaataaac tcgcaaactt
     2281 gcgtatcgac cagaataagt ctggcacgac cgcctttcac gccgggaaat ttttccgttt
     2341 tccagccttt ttctctgatc caacggttaa cagtttgttt agccacaccg aggcattcag
     2401 ccagttcttc ggtggtcatt ttattgcgta atcttttcat attatttgct atcgcgaatc
     2461 cctaagcgtt gtaacaatcc gataatccct tcccgcagaa gcaaggatgt aaactgtttt
     2521 tgttcaactg gcgtcatctc tttcgccagt gtcaccagca atacttcaag cggcgcatca
     2581 ccagaaaggg caggcgcttc tccctgacct tctggacgtt cagcattgcg aatatattca
     2641 cgaacctgtt cattgacgtg aaccagtcgg gctttgccac cctggacgcc aggttttggt
     2701 gacgttgtcc agccttcctt gcgtacccat ttattaatgg tctggcggct atagccggtc
     2761 agtctggcaa gttcatctgg tgtcatcctc tccttgaaca taacaattcc ctgaatgtat
     2821 gtgggtctat tagtagttca ttttataaca ccactttaca ggaaaccgtg acatgaataa
     2881 ctactgaatg cgagcggttt tccaaaattg ttcatttgcc tgatttttca gcgattgaaa
     2941 ctacacgttg caatttgccg ttgacacatt cgggcggaat tcatatgatg ccgcccgtca
     3001 actcgacaag ctttacgtga cggggctata gctcagctgg gagagcgctt gcatggcatg
     3061 caagaggtca gcggttcgat cccgcttagc tccaccaaat tttgcaccca gcaaatttgg
     3121 tacgtaaacg catcgtgggg ctatagctca gctgggagag cgcttgcatg gcatgcaaga
     3181 ggtcagcggt tcgatcccgc ttagctccac caaatttcca accctcgctg caaagcgggg
     3241 gttttttgtc tctgcttttt gccgcttttg taatacagtc tacgtccggg ttagtgccgc
     3301 ctggtgaaag catcattgga tgaaaaatcg gcaacaggct ggccccctgt ttgcttcgcg
     3361 atgcgaataa acttattatt tgtgtgcctg aaaactccga tcagtgagag tagtgtactc
     3421 atgtttgtgg agcataacct gataaaaaat atcaagatat tcacactagc gtttacgctc
     3481 accgtggtac ttattcagct atcccgtttt atttcgccac ttgccattat ccattccagt
     3541 tatatctttc tggcgtggat gccactgtgc gtaatgctgt caatcttgtt tatctttggc
     3601 tggcgaggtg tcgttcccgt tttatgcggg atgttttgca ccaatctgtg gaactttcat
     3661 ctctcttttt tacagactgc ggtcatgctc ggtagccaga cgtttgtcgt gttgtgtgcc
     3721 tgcgcaatat tacgctggca gctggggacg cgttggcgtt atggattgac cagccgatat
     3781 gtctggcaac gtctgttctg gcttggtttg gtgacgccga tcggcatcaa atgcagcatg
     3841 tatcttgtgg ggagcttctt tgatttcccg ctaaagatat ccaccttttt cggcgatgcg
     3901 gatgccattt tcacggtcgt tgatttgcta agccttttca ccgctgtgct gatttacaac
     3961 atgcttttct actatctcac tcgcatgatt gtaagtcccc actttgcgca gatattgtgg
     4021 cgcagggata tcgcgccgtc gttgggcaaa gagaaacgcg catttacctt aagctggctg
     4081 gcagcgttaa gcgtgcttct acttctgttg tgcacacctt atgaaaacga ctttattgcc
     4141 ggttacctgg tacccgtttt cttcatcatc tttaccctcg gggtcggtaa gcttcgctat
     4201 ccgtttttaa atctcacctg ggctgtttca acgctttgcc ttctgaatta caaccagaac
     4261 tttttgcaag gggtggaaac cgaatattcg ctggcattta ttcttgcggt gctgatttcc
     4321 tttagcgttt gcctgctcta tatggtgcgc atttatcatc gcagtgaatg gcttaatcgc
     4381 cgctggcatt tgcaggcgct gaccgatccg ttaacgctcc tgcccaactt ccgtgcgttg
     4441 gaacaagcgc cggagcaaga ggcgggcaag agtttttgct gcctgcgcat tgataatctt
     4501 gagtttatga gtcgtcatta cggcttaatg atgcgcgttc actgtatccg ctcaatttgc
     4561 cgtacgctgc tgccgttgat gcaggaaaac gaaaagttgt atcaattgcc gggtagtgaa
     4621 ctgctgttag tgctgagcgg gccggaaacg gaagggcgac tccagcatat ggttaacatc
     4681 ctgaatagtc ggcaaattca ctggaacaat accgggctgg atatgggcta tggtgctgcc
     4741 tgggggcgtt ttgatggaaa tcaggaaacc ctgcaaccct tgttggggca gttaagctgg
     4801 ctggcggagc aatcctgcgc acatcatcat gtgctggcgc tggatagcag agaggagatg
     4861 gtttccgggc agaccactaa acaggtgcta ttgctgaata ccattcgcac ggcgttagat
     4921 cagggtgatt tgctgctcta cgcccagcca attcgcaaca aagagggtga aggttatgat
     4981 gagatcctcg cgcgactgaa atatgacggc ggcattatga ccccggataa gtttctgccc
     5041 cttattgctc agtttaacct tagcgcgcgt tttgatttgc aagtgctgga atccttgttg
     5101 aagtggctgg caacacaccc ttgcgacaaa aaaggaccgc gcttttcagt caatttaatg
     5161 ccgctcacgc tgctgcaaaa gaatattgcc gggcggatta ttcgtctgtt taagcgttat
     5221 cacatctccc cgcaggcggt cattcttgag atcaccgagg agcaggcgtt ttctaacgca
     5281 gaaagcagca tgtacaacat cgagcagctg cataagtttg gtttccggat tgcgattgat
     5341 gactttggca ccggctatgc caactacgaa cggttaaagc gtttgcaggc tgatatcatc
     5401 aaaattgatg gcgtctttgt gaaagatatt gtcacgaaca cgctggatgc gatgattgtg
     5461 agatcaatta ccgatctggc gaaagcgaag tcattgagtg tggtcgcgga gtttgtcgag
     5521 acgcaacagc agcaggcgct attgcataag ctcggggtgc aatatctgca agggtatttg
     5581 attggtcgcc cgcagccatt agctgattaa caggcgtaaa aaaaacgggg aattatc
//
LOCUS       DADMIB010000221         5633 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.224, whole genome shotgun sequence.
ACCESSION   DADMIB010000221 DADMIB010000000
VERSION     DADMIB010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5633
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.224"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..353)
                     /locus_tag="JNZ89_004047"
     CDS             complement(<1..353)
                     /locus_tag="JNZ89_004047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937739.1"
                     /translation="MSYSVMFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGIT
                     LLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEV
                     AHGELSPVTLCDYYG"
     gene            complement(358..1008)
                     /gene="hyfE"
                     /locus_tag="JNZ89_004048"
     CDS             complement(358..1008)
                     /gene="hyfE"
                     /locus_tag="JNZ89_004048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 membrane subunit"
                     /protein_id="HAY8937740.1"
                     /translation="MIGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI
                     FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLA
                     ALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN
                     GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG"
     gene            complement(1020..2127)
                     /locus_tag="JNZ89_004049"
                     /pseudo
     CDS             complement(1020..2127)
                     /locus_tag="JNZ89_004049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001442177.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit D"
     gene            complement(2139..2249)
                     /locus_tag="JNZ89_004050"
     CDS             complement(2139..2249)
                     /locus_tag="JNZ89_004050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoin racemase"
                     /protein_id="HAY8937741.1"
                     /translation="MENLALTTLMLPFIGALVVSFSPQRRAAEWGFCSPH"
     gene            complement(2266..3213)
                     /gene="hyfC"
                     /locus_tag="JNZ89_004051"
     CDS             complement(2266..3213)
                     /gene="hyfC"
                     /locus_tag="JNZ89_004051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfC"
                     /protein_id="HAY8937742.1"
                     /translation="MRQTLCDGYLVIFALAQAVILLLLTPLFTGISRQIRARMHSRRG
                     PGIWQDYREIHKLFKRQEVAPISSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGG
                     GDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIA
                     GSTHIEMISNTLATGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTE
                     YSGAGLALAKWGLGLKQVVMAALFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFV
                     LASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL"
     gene            complement(3224..5241)
                     /gene="hyfB"
                     /locus_tag="JNZ89_004052"
                     /pseudo
     CDS             complement(3224..5241)
                     /gene="hyfB"
                     /locus_tag="JNZ89_004052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311371.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
     gene            complement(5241..>5633)
                     /gene="hyfA"
                     /locus_tag="JNZ89_004053"
     CDS             complement(5241..>5633)
                     /gene="hyfA"
                     /locus_tag="JNZ89_004053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HAY8937743.1"
                     /translation="QLNESLCIGCKLCAVVCPFGAISASGSRPVNAPAQYVFQADGSL
                     KDGEENAPTQHALLRWEPGVQTVAVKCDLCNFLPEGPACVRACPNQALRLITDDSLQR
                     QMKEKQRLAASWFANGGEDPLSLTQEQH"
BASE COUNT         1544 a         1588 c         1485 g         1016 t
ORIGIN      
        1 aaaccgtagt aatcgcacag tgtaacgggt gaaagctcgc cgtgtgccac ttcatgacgc
       61 atgtagccaa tcgagtaaac accggtgaga aagccaatca caccaagaat ggcgaggaac
      121 aaaccgccca gaccatcaat atgaagccac agtcccgcag cgaatatttc tcctgcatca
      181 gcggcagttt ggaccaccca gagtgccaga atcagcagca gtgtgatccc taagctatgt
      241 aatacagtca ccgtacaagt cgcagagagc ccccgtttcc ggcaggcaaa acagagcagc
      301 gaaaaaagca gcggcgtgag caggagtaaa gcgaacatca cagaataact catctcatta
      361 tcccttcagc gcggtcaagt tgttcacgtc cagcgtgccg tgggtacgcc atatttttct
      421 tgccagtaac accatcacaa tgacggcgaa gatggcgtcg gtagcgatac ctatttccac
      481 cagttccggt gctcgccagg caagaagcgc cagcaccaga tgggagccgt tttccatcag
      541 gcagtaacca aaaatttgcc gcaggatatt gcgctggctg acaatgcaca gcaggccaag
      601 cagaaaatga cctaacgcta ccgccagcgc cggtttcagc ccggtagcca tcggtagctt
      661 cacgggctga acgacaaatg cgcaaagcag gacaattaac gccgcgagca gtgccatcat
      721 tgccggaccg aataacgctt tttccgggat gttctgggga atatttcgtg cagcgtaagt
      781 catgattaac ggtaccagca gcactttggt gataaaggcg ctggcggacc agatcagcag
      841 ttgctctgcg gcgaacaggc acgagagagt ggcgaaaata gacaccagca ccagcgactg
      901 gcaggcgtaa aatccgcatg acaggcgata gcttttgacg ctaatcacaa acagcgatgt
      961 cagcatcatc agtcccgcca gattatttac gatcatagaa ccgatcattc atcatctcct
     1021 tactgcaacc aggtcgcggc gattacgctg gaaatcagcg acatcacaat cagtacaatc
     1081 aacaccaggc gcattgaccc tggcagcggt gcggcatcgg cgacggcctc gctcggtttg
     1141 ccaggcacaa cgcgaccaaa ccagcgaata aaccaggcga aactggcgac cgattcaatc
     1201 atcagcagaa tcatggcggg cagcaggatc cagtactcca ctgacaacgc aaaaccggcg
     1261 gcaaacagcg ggaatttact gaagaagccg ttgaacggcg gcacaccggt aatcgccagc
     1321 gctgccacgc agaaacccac gcctggcaac ggcagggagt gcaatacgcc acgcagacgc
     1381 ggcaacaagc gcgtgccgca gctgtaactc agcgcacctg ctacaaggaa aaacaggctt
     1441 ttagcgaacg cgtggttgac gatgtaggcg atgctgccct ccagtgccag ccgcccactt
     1501 tcaccatcga tgcggcgtgg agataggctc tgatcggtgt tggcgcttcc attgcgtccg
     1561 gtagccacgc ttgcatcggt agctgggccg atttccccca cgcggcaaac aggatgccgc
     1621 cataaaccag ataacgtgcg tcgccatgta actcgctcat cgcgctaagc acaaacgttc
     1681 cggtctgcaa aaacagcgtg gcggcggcaa gatacaaccc caacgaaccg atatgggtga
     1741 taagcaacgc ttttagtgtt gaacgctgcg ctttatcgct ctggtaataa ctgatcaacg
     1801 cccaggagca gccgccctaa tttcaaaaaa caacaactga ccgagcagcg tcgaggagag
     1861 taccagtccc gccatcgcgc cgataaacac cagcaaaaat gcgtaataac gattcgtgcc
     1921 gttatgcggg tgttcgcgat ttttatccgt cagataaccc gtggagtaga tcgtgaccag
     1981 caaaccgaga aacaccacca caaacagaat cagcgtactc acgcgatcaa tgaccaggcc
     2041 aaacaatgcc acatccccca cgttgaccaa cgtcaacgtg acggcaactt tatcggcctg
     2101 ataaaacgcg gagatcagcg acaacatgca cagcgtggtc agtgcggcga acaaaacccc
     2161 cattcggcgg cccgacgttg tggcgaaaac gaaacgacca gtgcgccgat aaaaggcagc
     2221 attaacgtcg tcagagcaag attttccata ttccgtcagt gctccttaca gaccggttaa
     2281 ccagaagacc catgcaagcg cagcaaggct gaagccaagc caggtcacat ggtgaatgag
     2341 taaaaaacgc ccgcgtgcca gcgtgttttc tgcgattgag gccagtacaa aaatcagcaa
     2401 aaccttgagc agcgtaacga caagtgaagt cagcaggcag gcgagagaaa gttcttgcgc
     2461 gcgcccaaag ggcagaaaca gggccacaaa cagtgctgcc atcacgacct gtttcagccc
     2521 cagcccccat ttcgctagcg ccagcccggc accggaatat tcggtcagcg ggccttcctg
     2581 taattcctgt tctgcttcag caacatcaaa gggaattttt cccatctcaa tgaagcaggc
     2641 aaaaccacag gccagtaacg ccagtacggt ggttagtggc gagttccagc ccgttgccag
     2701 cgtattgctg atcatctcga tatgcgtgga acctgctatc agcgccaata ccagcagtga
     2761 gagaatgagc atgggttcga ccagaatgcc gagcgtcaac tcgcgactgg caccgactcc
     2821 cgcaaacggg cttccggtat ccagtccgga aagagcaaag aaaaaacgaa acagggcaag
     2881 aagatagata agggtgatca gatcgccgcc gcccgcaaaa ggggaaacgg taataaaaag
     2941 tggtagggcc atcgccagca ccagcatgct gctgattaat acccacggca tcaggcggaa
     3001 catcagacct gaagatatag gcgcaacttc ctggcgttta aacagtttgt ggatctcgcg
     3061 ataatcctgc cagatccccg gcccgcggcg ggagtgcata cgcgcgcgta tctgccggga
     3121 aatacccgta aaaagcgggg ttagcagcag cagaatcacg gcctgtgcta acgcaaaaat
     3181 gaccagatat ccgtcgcaaa gagtttgtct catggtgatt tccttagacg gcaatagcga
     3241 ttagcagcac aaccagtgcg gcaactagat acaggcaata gagacgaaag tcgccgcttt
     3301 gcagatgctg tatttctttg gccagccgtt gggtggcgct cacgatgggg cggatcaccc
     3361 gctcatccca gaagggttct gtgctctgag ccctggcggt gacgtgcgca agatctttat
     3421 ttagcctcag cgtagggtcg agctgttgtc gtagacgaaa taacgcagag aagaccacac
     3481 gcagcggctg catcacgcca ttgcctgacg gagccatcgc gttttcccag ccgtagccgc
     3541 atgcccaggc atctcctgtg cgacgaaacg ctgcgcggcg cgaacgacac cacagccagt
     3601 aaaggccagg cagcaaaggc atcgccagta gtaacagcaa cagtaatgaa ggagtgaccc
     3661 gtgtatgaaa cgtgccgggt acaagtgcta ttccgctggc gacagtgacg ggaggggtat
     3721 tggtaaacgc atgggcaata tgcattatct tcggtgccag ccaactggca ctaagcgcaa
     3781 ttaatacgca gagtgccgcg agcagtagca tggcgacgat catcgtattt ggcacttcct
     3841 gtgcctcttc agcgtgtgta ctgcgcggcg caccacagaa agtaataccg tacattttga
     3901 cgaagcacat tactgccagc ccaccagtga ctgccagcat taccatagca ataggacccg
     3961 caagttgtag cgctacggct tccacacgac ttagtgagaa cagcgactgc caggtgtacc
     4021 attcgctgat aaaaccattc agcggaggaa tggctgatat cgcgaggcaa ccaatcaggc
     4081 atgctgcggc tgtccacggc atccgtttcg ccagtgcccc cattttttcc atgtcgtggg
     4141 tatgcaaacg cgaaataatc gcgcccgcgc cgagaaatag cagccctttg aacagcgcat
     4201 ggttgagcag atgaaacagt gcgccgagca gtccaaccac ggtgagcagc gggtcgtgca
     4261 gtgacagacc gtccatcgcc acaccgactg ccagcaaaat aatgccgacg ttttcgacgg
     4321 tactccaggc cagcagccgt ttgatatcct gttccgccag cgcatatagc acgcccagga
     4381 gcgcggagat tgcgccgatc gccatcacca gaatgcccca ccacagaggc aaacccgttt
     4441 gcgccagcag atccatcgct actttcagga tgccgaaaat accgattttg accattacgc
     4501 cagacatcaa cgccgaagcg tgcgatggtg cggcagggtg agcgcgcggc aaccagctgt
     4561 gcaacggcat catcccggct ttcgcgccaa aaccgaaaaa ggccagcaga aacatcgccg
     4621 acgccagccc cggagaaagt gaaagcgtgc gaaactggca aaatcgaggc tgccgctttc
     4681 gcgccccatc agcaagaagg cgatcataat cagcaccgat ccggcgtggg cgataaaaaa
     4741 gtagagcatg ccagcgttga tcgacgtttt atcctgcctg gcaatgacca gaaaccagga
     4801 agacagcgac atcatttcaa acagcacgat gaaccaaaaa gcgttgtcca tcaccagcag
     4861 ggcaaccatc gatgcgatga aaagattcat aaagaagccc atcgccgccg cgcctttgcc
     4921 ctcgtattcg cgcatataag tcaatgaata gagcgaacaa accaccacca gcaaggagat
     4981 aaccagcacc ataaataccg agaggctatc cattcgcagg gttaaatcgg caaagtcaaa
     5041 aggggtggca aaacgggcga ctaaagttac accagcatgt aattgcgtaa ttccgctgat
     5101 gatgccaatc acgccgccca ccagcgatgt gatgccggaa agcttaatag ccagtctgtc
     5161 cagaccgagt aaaaacagcg aagccagact ggcaaacaga aagaggatca gcgaccaggt
     5221 taataattgc agggcatcca ttagtgttgc tcctgagtga gggaaagggg atcctccccg
     5281 ccattggcaa accagcttgc ggcaaggcgc tgtttttctt tcatctgacg ttgcaggcta
     5341 tcgtcggtaa tcagccgtaa cgcctgattc gggcaagcgc gaacgcaggc cggaccttct
     5401 ggcaagaaat tacacaggtc gcatttcacc gcgacggtct ggacacccgg ttcccagcgc
     5461 agcaaagcat gttgggtcgg cgcgttttct tcgccatctt tgagtgagcc gtcagcctga
     5521 aaaacatatt gcgcaggggc attcaccgga cggcttcctg aagcgctgat tgcgccaaat
     5581 gggcagacca cggcgcaaag cttgcagcca atacagaggc tttcgttgag ttg
//
LOCUS       DADMIB010000222         5584 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.225, whole genome shotgun sequence.
ACCESSION   DADMIB010000222 DADMIB010000000
VERSION     DADMIB010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5584
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.225"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            29..244
                     /locus_tag="JNZ89_004054"
     CDS             29..244
                     /locus_tag="JNZ89_004054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001384468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HAY8937744.1"
                     /translation="MSIERFQSLATEGKMLSLSWWENEYAVLQWKNHVLHAKAQQEGR
                     ESIFDFYKISIAHITREYSFKKDKDNV"
     gene            237..623
                     /locus_tag="JNZ89_004055"
     CDS             237..623
                     /locus_tag="JNZ89_004055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000460649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid-binding protein"
                     /protein_id="HAY8937745.1"
                     /translation="MFDVHVVLDNQIGQLALLGKTLGNKGIGLEGGGIFTVGDECHAH
                     FLVEQGKEAKIALEQAGLLVLAIRTPLIRKLKQEKPGELGEIARVLAENNINILVQYS
                     DHANQLILITDNDSMAASVTLPWAIK"
     gene            631..1317
                     /locus_tag="JNZ89_004056"
     CDS             631..1317
                     /locus_tag="JNZ89_004056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HAY8937746.1"
                     /translation="MANLIRKEVTFESSIAAIGAAMSDISRVKILSALMDGRAWTATE
                     LSSVANISASTASSHLSKLLDCQLITVVAQGKHRYFRLAGKDIAELMESMMGISLNHG
                     VHAKVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITLSGIQYFHEMG
                     IDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKGWLTRHLGYREVTITEKG
                     YAAFKTHFHI"
     gene            complement(1295..1918)
                     /gene="tetR(B)"
                     /locus_tag="JNZ89_004057"
     CDS             complement(1295..1918)
                     /gene="tetR(B)"
                     /locus_tag="JNZ89_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000088607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(B)"
                     /protein_id="HAY8937747.1"
                     /translation="MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
                     VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLG
                     TRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERET
                     PTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS"
     gene            2000..3205
                     /gene="tet(B)"
                     /locus_tag="JNZ89_004058"
     CDS             2000..3205
                     /gene="tet(B)"
                     /locus_tag="JNZ89_004058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001089064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(B)"
                     /protein_id="HAY8937748.1"
                     /translation="MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFG
                     VLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRL
                     LSGITGATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSP
                     FFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYF
                     SAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKT
                     AVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQGVMSIQTKSHQQGAL
                     QGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQA
                     QGSKQETSA"
     gene            complement(3318..3911)
                     /gene="tetC"
                     /locus_tag="JNZ89_004059"
     CDS             complement(3318..3911)
                     /gene="tetC"
                     /locus_tag="JNZ89_004059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracyline resistance-associated
                     transcriptional repressor TetC"
                     /protein_id="HAY8937749.1"
                     /translation="MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKAL
                     VTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIID
                     NNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLN
                     GWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK"
     gene            3999..4409
                     /locus_tag="JNZ89_004060"
                     /pseudo
     CDS             3999..4409
                     /locus_tag="JNZ89_004060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014656611.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(4425..>5584)
                     /locus_tag="JNZ89_004061"
     CDS             complement(4425..>5584)
                     /locus_tag="JNZ89_004061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001339197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS4-like element ISVsa5 family transposase"
                     /protein_id="HAY8937750.1"
                     /translation="LHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRI
                     DRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGR
                     SVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGW
                     YWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSR
                     SKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIEE
                     TFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQAN
                     TVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALGKL"
BASE COUNT         1543 a         1031 c         1214 g         1796 t
ORIGIN      
        1 accactatta agtcatgtag ctggttttat ttcaattgaa cgttttcaaa gtctagctac
       61 agaaggaaaa atgttatcgc tatcttggtg ggaaaacgaa tacgcagttc tgcaatggaa
      121 aaatcatgtt ttacatgcga aagctcaaca agaagggcga gagtcaatat ttgattttta
      181 caaaattagt attgctcata ttactcgcga atattcattt aaaaaggaca aggataatgt
      241 ttgatgttca cgttgtttta gataatcaaa taggacaatt agcattacta ggaaaaacat
      301 taggtaataa aggtattgga ttggaagggg gagggatatt tacggttggt gatgaatgcc
      361 atgctcattt tcttgttgaa caaggaaagg aagctaaaat agcgctagag caagctggac
      421 tgttagtact tgcgatccgg acaccattaa ttcgtaagtt aaaacaggaa aaaccggggg
      481 aacttggcga aatagcacga gtattggcgg agaataacat taatatttta gtgcaataca
      541 gtgaccatgc taaccaactg atattaataa cggacaatga tagtatggct gcatctgtta
      601 cgctcccttg ggcaataaag tgaacttgcg atggctaatt taatacgaaa agaggttacc
      661 tttgagtcct caatagccgc gataggggcg gctatgtctg acatttcacg agttaaaata
      721 ctcagtgctt tgatggatgg gcgagcttgg acggccactg agctaagttc tgtggcgaat
      781 atatcagctt caacggcgag cagtcattta tctaaattat tagattgcca gctaatcaca
      841 gtagtagctc aaggcaagca tcgttatttt cggctagcag gaaaagatat tgctgaattg
      901 atggaaagta tgatggggat ctccttaaac catggcgtac atgccaaagt ttccacgcca
      961 gtgcatttac gaaaagcacg tacttgctat gatcatttag ctggcgaagt tgccgttaag
     1021 atctatgatt ccctttgtca acagcaatgg atcactgaaa atggttcaat gatcacatta
     1081 agtggtattc aatattttca tgaaatggga attgacgttc cttccaaaca ttcacgtaaa
     1141 atctgttgtg cgtgtttaga ttggagtgaa cgccgtttcc atttaggtgg gtacgttgga
     1201 gccgcattat tttcgcttta tgaatctaaa gggtggttaa ctcgacatct tggttaccgt
     1261 gaagttacca tcacggaaaa aggttatgct gcttttaaga cccactttca catttaagtt
     1321 gtttttctaa tccgcatatg atcaattcaa ggccgaataa gaaggctggc tctgcacctt
     1381 ggtgatcaaa taattcgata gcttgtcgta ataatggcgg catactatca gtagtaggtg
     1441 tttccctttc ttctttagcg acttgatgct cttgatcttc caatacgcaa cctaaagtaa
     1501 aatgccccac agcgctgagt gcatataatg cattctctag tgaaaaacct tgttggcata
     1561 aaaaggctaa ttgattttcg agagtttcat actgtttttc tgtaggccgt gtacctaaat
     1621 gtacttttgc tccatcgcga tgacttagta aagcacatct aaaactttta gcgttattac
     1681 gtaaaaaatc ttgccagctt tccccttcta aagggcaaaa gtgagtatgg tgcctatcta
     1741 acatctcaat ggctaaggcg tcgagcaaag cccgcttatt ttttacatgc caatacaatg
     1801 taggctgctc tacacctagc ttctgggcga gtttacgggt tgttaaacct tcgattccga
     1861 cctcattaag cagctctaat gcgctgttaa tcactttact tttatctaat ctagacatca
     1921 ttaattccta atttttgttg acactctatc attgatagag ttattttacc actccctatc
     1981 agtgatagag aaaagtgaaa tgaatagttc gacaaagatc gcattggtaa ttacgttact
     2041 cgatgccatg gggattggcc ttatcatgcc agtcttgcca acgttattac gtgaatttat
     2101 tgcttcggaa gatatcgcta accactttgg cgtattgctt gcactttatg cgttaatgca
     2161 ggttatcttt gctccttggc ttggaaaaat gtctgaccga tttggtcggc gcccagtgct
     2221 gttgttgtca ttaataggcg catcgctgga ttacttattg ctggcttttt caagtgcgct
     2281 ttggatgctg tatttaggcc gtttgctttc agggatcaca ggagctactg gggctgtcgc
     2341 ggcatcggtc attgccgata ccacctcagc ttctcaacgc gtgaagtggt tcggttggtt
     2401 aggggcaagt tttgggcttg gtttaatagc ggggcctatt attggtggtt ttgcaggaga
     2461 gatttcaccg catagtccct tttttatcgc tgcgttgcta aatattgtcg ctttccttgt
     2521 ggttatgttt tggttccgtg aaaccaaaaa tacacgtgat aatacagata ccgaagtagg
     2581 ggttgagacg caatcgaatt cggtatacat cactttattt aaaacgatgc ccattttgtt
     2641 gattatttat ttttcagcgc aattgatagg ccaaattccc gcaacggtgt gggtgctatt
     2701 taccgaaaat cgttttggat ggaatagcat gatggttggc ttttcattag cgggtcttgg
     2761 tcttttacac tcagtattcc aagcctttgt ggcaggaaga atagccacta aatggggcga
     2821 aaaaacggca gtactgctcg gatttattgc agatagtagt gcatttgcct ttttagcgtt
     2881 tatatctgaa ggttggttag ttttccctgt tttaatttta ttggctggtg gtgggatcgc
     2941 tttacctgca ttacagggag tgatgtctat ccaaacaaag agtcatcagc aaggtgcttt
     3001 acagggatta ttggtgagcc ttaccaatgc aaccggtgtt attggcccat tactgtttgc
     3061 tgttatttat aatcattcac taccaatttg ggatggctgg atttggatta ttggtttagc
     3121 gttttactgt attattatcc tgctatcgat gaccttcatg ttaacccctc aagctcaggg
     3181 gagtaaacag gagacaagtg cttagttatt tcgtcaccaa atgatgttat tccgcgaaat
     3241 ataatgaccc tcttgataac ccaagagggc attttttacg ataaagaaga tttagcttca
     3301 aataaaacct atctatttta tttatctttc aagctcaata aaaagccgcg gtaaatagca
     3361 ataaattggc cttttttatc ggcaagctct tttaggtttt tcgcatgtat tgcgatatgc
     3421 ataaaccagc cattgagtaa gtttttaagc acatcatcat cataagcttt aagttggttc
     3481 tcttggatca atttgctgac aatggcgttt accttaccag taatgtattc aaggctaatt
     3541 ttttcaagtt cattccaacc aatgataggc atcacttctt ggatagggat aaggttttta
     3601 ttattatcaa taatataatc aagataatgt tcaaatatac tttctaaggc agaccaacca
     3661 tttgttaaat cagtttttgt tgtgatgtag gcatcaatca taattaattg ctgcttataa
     3721 caggcactga gtaattgttt tttattttta aagtgatgat aaaaggcacc tttggtcacc
     3781 aacgcttttc ccgagatctc atctattgaa acagcttgat agcctttttc aacaaacaat
     3841 attcgtgctg agttaaccag tgattgatag gtactcttaa aattttcttg ttgatgattt
     3901 ttattttcca tgatagattt aaaataacat accgtcagta tgtttatggt atcatgatga
     3961 tgtggtcgtg acaatcttaa gaacatttag gttattttat gtatattgaa cagcattctc
     4021 gctatcaaaa taaagctaat aacatccaat taagatatga tgataagcag tttcatacaa
     4081 cggttatcaa agatgttcta ttatggattg aacataattt agatcagtct ttactgcttg
     4141 atgatgtggc gaataaagcg ggttatacca agtggtattt tcagcggctg ttcaaaaaag
     4201 taacaggggt cacactggct agctatattc gtgctcgtcg tttgacgaaa gcggctgttg
     4261 agttgaagtt gacgaaaaaa actatccttg agatcgcatt acaatatcaa tttgattccc
     4321 aacaatcttt tacacgtcga tttaagtaca tttttaaggt tacaccaagt tattatcggc
     4381 gtaataaatt atgggaattg gaggcaatgc actgagagat cccctcataa tttccccaaa
     4441 gcgtaaccat gtgtgaataa attttgagct agtagggttg cagccacgag taagtcttcc
     4501 cttgttattg tgtagccaga atgccgcaaa acttccatgc ctaagcgaac tgttgagagt
     4561 acgtttcgat ttctgactgt gttagcctgg aagtgcttgt cccaaccttg tttctgagca
     4621 tgaacgcccg caagccaaca tgttagttga agcatcaggg cgattagcag catgatatca
     4681 aaacgctctg agctgctcgt tcggctatgg cgtaggccta gtccgtaggc aggacttttc
     4741 aagtctcgga aggtttcttc aatctgcatt cgcttcgaat agatattaac aagttgtttg
     4801 ggtgttcgaa tttcaacagg taagttagtt gctagaaccc atggctcctt tgccgacgct
     4861 gagtagattt taggtgacgg gtggtgacaa tgagtccgtg tcgagcgctg attttttcgg
     4921 cctttagagc gagatttata caatagaatt tggcatgaga ttggattgct tttagtcagc
     4981 ctcttatagc ctaaagtctt tgagtgacta gatgacatat catgtaagtt gctgataggt
     5041 ttccagtttt ccgctcctag gtctgcatat tgtacttttc ctcttactcg acttaaccag
     5101 taccaaccca gcttctcaac ggatttatac catggcactt taaagccagc atcactgaca
     5161 atgagcggtg tggtgttact cggtagaatg ctcgcaaggt cggctagaaa ttggtcatga
     5221 gctttctttg aacattgctc tgaaagcggg aacgctttct cataaagagt aacagaacga
     5281 ccgtgtagtg cgactgaagc tcgcaatacc ataagtcgtt tttgctcacg aatatcagac
     5341 cagtcaacaa gtacaatggg catcgtattg cccgaacaga taaagctagc atgccaacgg
     5401 tatacagcga gtcgctcttt gtggaggtga cgattaccta acaatcggtc gattcgtttg
     5461 atgttatgtt ttgttctcgc tttggttggc aggttacggc caagttcggt aagagtgaga
     5521 gttttacagt caagtaatgc gtggcaagcc aacgttaagc tgttgagtcg ttttaagtgt
     5581 aatt
//
LOCUS       DADMIB010000223         5581 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.226, whole genome shotgun sequence.
ACCESSION   DADMIB010000223 DADMIB010000000
VERSION     DADMIB010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5581
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.226"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(35..772)
                     /gene="bamD"
                     /locus_tag="JNZ89_004062"
     CDS             complement(35..772)
                     /gene="bamD"
                     /locus_tag="JNZ89_004062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HAY8937751.1"
                     /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
                     DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH
                     PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
                     TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLM
                     ENAYRQMQMNAQAEKVAKIIAANSSNT"
     gene            907..1887
                     /gene="rluD"
                     /locus_tag="JNZ89_004063"
     CDS             907..1887
                     /gene="rluD"
                     /locus_tag="JNZ89_004063"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017383977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HAY8937752.1"
                     /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR
                     VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDL
                     VVHPGAGNLDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
                     SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF
                     RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR
                     QALHATMLRLYHPISGIEMEWHAPIPEDMVELIEVMRADFEEHKDEVDWL"
     gene            1884..2615
                     /gene="pgeF"
                     /locus_tag="JNZ89_004064"
     CDS             1884..2615
                     /gene="pgeF"
                     /locus_tag="JNZ89_004064"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase"
                     /protein_id="HAY8937753.1"
                     /translation="MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP
                     EHVEENRKQLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV
                     MTADCLPVLFCNRAGTEVAAVHAGWRGLCAGVLEETVSCFADKPENILAWLGPAIGPR
                     AFEVGAEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTY
                     TENETFFSYRRDKTTGRMASFIWLI"
     gene            2745..5318
                     /gene="clpB"
                     /locus_tag="JNZ89_004065"
     CDS             2745..5318
                     /gene="clpB"
                     /locus_tag="JNZ89_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HAY8937754.1"
                     /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
                     SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG
                     DNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA
                     LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
                     KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID
                     LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD
                     KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
                     LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL
                     HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD
                     SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL
                     VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE
                     ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV
                     Q"
BASE COUNT         1390 a         1330 c         1513 g         1348 t
ORIGIN      
        1 ctcaagggct gccgttttgt gtttcaggtt tctgttatgt attgctgctg tttgcggcga
       61 tgattttcgc tactttttca gcttgcgcat tcatctgcat ctgacggtat gcattttcca
      121 tcagtggcag cgcatcacgc gtagcctggg tatccgggta gtcgcgcaac atgccttcta
      181 cgcggttaac gacggcaacc catgcaccac gttctgtata gtactcggca acggagtatt
      241 catatttcgc cagacgatct ttcaggaata ccagacgttt ggttgcatcg gtagtgtact
      301 gactgttcgg atagccgcgc accagtttgg aaaagtcact aaacgcagct cgtgcatgtt
      361 gaggatcgcg atcgctacgg tcaacgccaa agaacccttg cagcgcactg tcatccagcg
      421 ccatattggt caggccacgc atgtacatga cataatcgat attcggatgg gtcgggttaa
      481 ggcgaataaa acgatcgatg gcagcctgtg ctaacggcaa atcggcgttt ttatagtagg
      541 cgtagatgag atccagctgc acctgctgcg aatacggacc aaacggatag cgattatcta
      601 atgcttccag ttgcgttatt gcctgtctcc agttaccgtc ctgcagcttt tgttgtgcag
      661 tcgcgtaaat ttcatttggt ggattatcag gtacttcttc ctttgacccc gagcaacccg
      721 ccaaaaacag gcttagtgtg gcggctgcca ccagatattt catgcgcgtc atgacgtttt
      781 gactttcctc aaaatgtaat acgggagatt ctctgttcct gctcccggtt aagaccagct
      841 acaatagcac actatattaa acggcaaagc cgtaaaaccc caacgataaa cgaagaagca
      901 gtatatatgg cacaacgagt acagctcact gcaacggtgt ccgaaaacca actcggtcaa
      961 cgcttagatc aggctttggc cgaaatgttc ccggattatt cacgttcgcg aataaaagaa
     1021 tggatcctcg accagcgcgt gctggtaaac ggcaaagttt gtgataagcc gaaagaaaaa
     1081 gtattgggtg gcgagcaggt tgccatcaac gctgagattg aagaagaagc gcgttttgaa
     1141 ccgcaggata tcccgctgga tatcgtctat gaagatgaag atatcatcgt cattaataaa
     1201 ccgcgcgacc tggtggtaca tcctggcgcg ggtaacctgg atggcacggt actgaatgcg
     1261 ttgcttcatt attatccgcc cattgccgat gtaccgcgtg cgggcatcgt ccatcgtctg
     1321 gataaagaca ccactggcct gatggttgtg gcaaaaaccg ttccggctca gacgcgttta
     1381 gtcgaatctt tgcaaaggcg tgaaattact cgtgagtatg aagcggtggc aattggtcat
     1441 atgaccgctg gcggtacagt agatgaacca atcagccgcc acccgaccaa acgtactcac
     1501 atggcggtgc atcccatggg caaaccggcg gtcactcact atcgcatcat ggaacacttc
     1561 cgtgtgcaca cgcgtctgcg gttgcgtctg gaaaccggac gtacgcacca gatccgcgtg
     1621 catatggcgc atattaccca tccgctggtg ggcgatccgg tttatggtgg ccgtccgcgt
     1681 ccgccaaaag gtgcttcgga agcgtttatc tccacgctgc gtaagtttga ccgccaggcg
     1741 cttcatgcaa ctatgctgcg tctttatcac ccgatctccg gcatcgaaat ggaatggcat
     1801 gcgcctattc cagaagatat ggtggagttg attgaggtta tgcgcgccga tttcgaagag
     1861 cataaggatg aagtggactg gttatgagta agctgattgt cccgcagtgg ccgctgccaa
     1921 aaggtgttgc ggcctgtagc tctacccgta tcggcggcgt gagcttgcca ccttacgact
     1981 ctctcaacct tggcgctcat tgtggtgata acccggagca cgtagaggag aatcgcaagc
     2041 aactttttgc tgcgggaaat ttgccttcaa aaccggtctg gcttgagcag gtacacggca
     2101 aagatgtgct taagctcact ggcgaacctt atgcctcaaa acgggcggat gcctcttata
     2161 gcaatacgcc cggcacggtt tgcgcagtga tgactgccga ctgcctccct gtgctgtttt
     2221 gcaatcgagc gggaacggaa gtcgccgccg ttcatgctgg ctggcgtgga ctgtgcgcag
     2281 gcgtgctgga agagacggtt tcctgttttg ctgataaacc tgaaaacatt ctcgcctggt
     2341 tagggccggc aattggtcca cgcgcgttcg aagtgggggc ggaggttcgc gaggcgttta
     2401 tggcagtaga cgctaaagca agtgcagctt tcattcagca tggtgataag tatctggcgg
     2461 atatttatca gcttgcccgg cagcgtctgg cgaacgtggg tgttgagcaa attttcggcg
     2521 gcgaccgttg tacatatacg gaaaatgaga ctttcttctc ttatcgtcgc gacaagacca
     2581 ccggtcgtat ggcaagtttc atttggctga tataacctaa agaatcaaga cgattcggta
     2641 cgcgtgattt tcttttcaca ttaatctggt caataacctt gaataattga gggatgacct
     2701 catttaatct ccagtagcaa ctttgatccg ttatgggagg agttatgcgt ctggatcgtc
     2761 ttactaataa attccagctt gctcttgccg atgcccaatc acttgcactc gggcacgaca
     2821 accaattcat cgaaccactt catttaatga gcgccctgct gaatcaggaa gggggttcgg
     2881 ttagtccttt attaacatcc gctggcataa atgctggcca gttgcgcaca gatatcaatc
     2941 aggcattaaa tcgtttaccg caggttgaag gtactggtgg tgatgtccag ccatcacagg
     3001 atctggtgcg cgttcttaat ctttgcgaca agctggcgca aaaacgaggt gataacttta
     3061 tctcgtcaga actgttcgtt ctggcggcac ttgagtctcg cggcacgctg gccgacatcc
     3121 tgaaagcagc aggggcgacc accgccaaca ttactcaagc gattgaacaa atgcgtggag
     3181 gtgaaagcgt gaacgatcaa ggtgctgaag accaacgtca ggctttgaaa aaatatacca
     3241 tcgaccttac cgaacgagcc gaacagggca aactcgatcc ggtgattggt cgtgatgaag
     3301 aaattcgccg taccattcag gtgctgcaac gtcgtactaa aaataacccg gtactgattg
     3361 gtgaacccgg cgtcggtaaa actgccatcg ttgaaggtct ggcgcagcgt attatcaacg
     3421 gcgaagtgcc ggaaggattg aaaggccgcc gcgtactggc gctggatatg ggcgcgctgg
     3481 tggctggggc gaaatatcgc ggtgagtttg aagaacgttt aaaaggcgtg cttaacgatc
     3541 ttgccaaaca ggaaggcaac gtcatcctgt ttatcgacga attacatacc atggtcggcg
     3601 cgggtaaagc cgatggcgca atggacgccg gaaacatgct gaaaccggcg ctggcgcgtg
     3661 gtgaattgca ctgcgtaggt gccacgacgc ttgacgaata tcgccagtac atcgaaaaag
     3721 atgctgcgct ggaacgtcgt ttccagaaag tgtttgttgc cgagccttct gttgaagata
     3781 ccattgcgat tctgcgtggc ctgaaagaac gttacgaatt gcaccaccat gtgcaaatta
     3841 ctgacccggc aattgttgca gcagcgacgt tgtctcatcg ctacattgct gaccgtcagc
     3901 tgccggataa agccatcgac ctgatcgatg aagcagcatc cagcattcgt atgcagattg
     3961 actcaaaacc agaagaactc gaccgactcg atcgtcgtat catccagctc aaactggaac
     4021 aacaggcgtt aatgaaagag tctgatgaag ccagtaaaaa acgcctggat atgctcaacg
     4081 aagaactgag cgacaaagaa cgtcagtact ccgagttaga agaagagtgg aaagcagaaa
     4141 aggcatcgct ttctggtacg cagaccatta aagcggaact ggaacaggcg aaaatcgcta
     4201 ttgaacaggc tcgccgtgtg ggggacctgg cgcggatgtc tgaactgcaa tacggcaaaa
     4261 tcccggaact ggaaaagcaa ctggaagccg caacgcagct cgaaggcaaa actatgcgtc
     4321 tgttgcgtaa taaagtgacc gacgccgaaa ttgctgaagt gctggcgcgt tggacgggga
     4381 ttccggtttc tcgcatgatg gaaagcgagc gcgaaaaact gctgcgtatg gagcaagaac
     4441 tgcaccatcg cgtcattggt cagaacgaag cggttgatgc ggtatctaac gctattcgcc
     4501 gtagccgtgc ggggttggcg gatccaaatc gcccgattgg ttcattcctg ttcctcggcc
     4561 caacgggtgt ggggaaaact gagctttgta aggcgctggc gaactttatg tttgatagcg
     4621 acgaggcgat ggtccgtatc gatatgtccg agtttatgga gaaacactcg gtgtctcgtc
     4681 tggttggtgc gcctccggga tatgtcggtt atgaagaagg tggctacctg accgaagctg
     4741 tgcgtcgtcg tccgtattcc gtcatcctgc tggatgaagt ggaaaaagcg catccggatg
     4801 tcttcaacat tctgttgcag gtactggatg atggtcgtct gactgacggg caggggagaa
     4861 cggtcgactt ccgtaatacg gttgtcatta tgacctctaa cctcggttcc gatttgattc
     4921 aggaacgctt cggtgaactg gattatgcgc acatgaaaga gctggtgctc ggtgtggtaa
     4981 gccataactt ccgtccggaa ttcattaacc gtattgatga agtggtggtc ttccatccgc
     5041 tgggtgaaca gcacattgcc tcgattgcgc agattcagtt gaaacgtctg tacaaacgtc
     5101 tggaagaacg tggttatgaa atccacattt ctgacgaggc gctgaaactg ctgagcgaga
     5161 acggttacga tccagtctat ggtgcacgtc ctttgaaacg tgctatccag cagcagatcg
     5221 aaaacccgct ggcacagcaa atactgtctg gtgaattggt tccgggtaaa gtgattcgcc
     5281 tggaagttaa tgaagaccgg attgtcgctg tccagtaatg ataaaacgag cccttcgggg
     5341 ctcgtttttg tctataagtt agacggaaaa gactatattt aagatgtttt gcctgaaaaa
     5401 tgagcgaacg ataaagtttt tatatttttc gcttgtcagg ccggaataac tccctataat
     5461 gcgccaccac tgacacggaa caacggcaaa cacgccgccg ggtcagcggg gttctcctga
     5521 gaatctcaac agagaaaagc aaaaaaatgc ttgactctgt agcgggaaag cgcattatgt
     5581 a
//
LOCUS       DADMIB010000224         5437 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.227, whole genome shotgun sequence.
ACCESSION   DADMIB010000224 DADMIB010000000
VERSION     DADMIB010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5437
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.227"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..914
                     /locus_tag="JNZ89_004066"
     CDS             <1..914
                     /locus_tag="JNZ89_004066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY8937755.1"
                     /translation="PLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHG
                     VLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGE
                     VDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSV
                     SSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYAT
                     AGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKV
                     CTGRWRDLNLCVVVVAALFALKIILVD"
     gene            967..1419
                     /locus_tag="JNZ89_004067"
     CDS             967..1419
                     /locus_tag="JNZ89_004067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1198 domain-containing protein"
                     /protein_id="HAY8937756.1"
                     /translation="MIWIMLATLAVVFVVGFRVLTSGARKAIRRISDRLNIDVVPVES
                     MVDQMGKSAGDEFLRYLHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKAR
                     LAAPITDAQVRLALGFLRETEPEMQDINAFQMRYNAFFQPAEGVHWLH"
     gene            1630..2820
                     /gene="nepI"
                     /locus_tag="JNZ89_004068"
     CDS             1630..2820
                     /gene="nepI"
                     /locus_tag="JNZ89_004068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418118.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine ribonucleoside efflux pump NepI"
                     /protein_id="HAY8937757.1"
                     /translation="MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLT
                     PMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRCYVVILFAVLLTLSCLLV
                     SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA
                     APLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGV
                     MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFIL
                     KRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL
                     ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVK
                     MKKS"
     gene            complement(2861..3154)
                     /locus_tag="JNZ89_004069"
     CDS             complement(2861..3154)
                     /locus_tag="JNZ89_004069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937758.1"
                     /translation="MKPTTLLLIFTFFAMPGIVYAELPFSSLQSAKEKTTVLQDLRKI
                     CTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM"
     gene            3376..4194
                     /gene="nlpA"
                     /locus_tag="JNZ89_004070"
     CDS             3376..4194
                     /gene="nlpA"
                     /locus_tag="JNZ89_004070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpA"
                     /protein_id="HAY8937759.1"
                     /translation="MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQ
                     DVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGY
                     KLVAVGNTFVFPMAGYSKKITTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKE
                     GKGLLHTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDS
                     VFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW"
     gene            complement(4221..5120)
                     /locus_tag="JNZ89_004071"
     CDS             complement(4221..5120)
                     /locus_tag="JNZ89_004071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY8937760.1"
                     /translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRL
                     IFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATA
                     TVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSLSPAALF
                     WGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLI
                     LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDW
                     LGTLLILSSVILISMDSRRRPEK"
     gene            complement(5231..5434)
                     /locus_tag="JNZ89_004072"
     CDS             complement(5231..5434)
                     /locus_tag="JNZ89_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000965477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HAY8937761.1"
                     /translation="MLYFQDLMPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYH
                     ALFWLAIGMLGIAMICLLFIKDI"
BASE COUNT         1300 a         1237 c         1391 g         1509 t
ORIGIN      
        1 ttcccttaag tttacgtatt ggtatcacca gcggaattgg attatttatc gccttaatgg
       61 gattaaaaaa tactggcgtt attgtcgcca ataaagacac gctggtgatg attggcgatt
      121 taagttctca cggcgtgttg ttaggtattt tagggttttt tattataacc gtgttgtcat
      181 cacgtcattt tcatgccgcg gtgctggttt ctatagtggt gacgtcttgc tgtggattat
      241 ttttcggtga tgttcatttt agcggcgtct attccattcc gcctgatatt agcggcgtca
      301 ttggtgaagt agatttgagc ggcgcgttaa cacttgaact cgccggtatc attttctcct
      361 ttatgctgat caacctattt gattcatcag gaacattaat tggtgtaact gataaagcgg
      421 gcttaataga tggtaacggt aaattcccca atatgaataa ggcgctgtat gttgatagcg
      481 tcagttcggt ggcgggtgcg tttatcggca cctcgtctgt tactgcctat attgaaagta
      541 cttctggtgt ggcagtcggt ggccgcacgg ggctgactgc ggttgtggtt ggcgttatgt
      601 tcctgttggt tatgttcttc tcaccgctgg tggcgatggt tcctccttac gcaaccgccg
      661 gagcgttaat ctttgttggc gtgctgatga cttcgagcct ggcgcgcgtt aactgggatg
      721 attttaccga atcggtgcct gcgtttatta ccacggtgat gatgcccttt actttctcga
      781 tcaccgaagg gattgcactc ggctttatgt cgtactgcat catgaaagtg tgcaccgggc
      841 gctggcgcga tctgaacctg tgtgtggtgg tggtcgcagc tctgtttgca ctgaagatta
      901 ttctggtgga ttagtaactg gcgagggttt ccagatatca tgagttctga ttacgcagga
      961 gaactcatga tctggataat gctcgccacg ctggcggtag tgtttgtggt tggttttcgg
     1021 gtgctgacat ccggggccag aaaagcgatt cgccgtatca gtgatcggct gaatatcgat
     1081 gtcgtacccg tggagtcgat ggtcgatcaa atgggaaagt cagccggtga cgaattttta
     1141 cgttatttgc atcgcccgga tgagtcgcac ctgcaaaacg ccgcgcaggt gttgctcatc
     1201 tggcaaattg tcattgtcga tggtagcgaa cagaacctgc tgcaatggca tcggatttta
     1261 caaaaagccc gtcttgccgc gccgattacc gatgctcaag tcaggctggc gctgggtttt
     1321 ctgcgcgaaa ccgaacctga aatgcaggat attaatgctt ttcagatgcg ctataacgcg
     1381 ttctttcagc ctgccgaggg cgttcactgg ctgcattaaa accgcttcgt cttatcagcc
     1441 tacagaccgc gcctgacctg tcgggtggat aagacgttca cgccgcatcc ggtaatcttt
     1501 gccctgttcc gtttcgatct taactccagc tcaagcaaca ccgtaaaagt tgcaaaaacg
     1561 ttaaatgcat cacacatttc aatgttaaag tggtcggctt ttcccctgaa acatgccacg
     1621 ggtaacacca tgagtgaatt tattgccgaa aaccgcggcg cggatgccat cacccgaccg
     1681 aactggtcag ccgttttctc ggtggcgttt tgtgtcgcct gtctgattat cgttgagttt
     1741 ttgcccgtca gtttgttgac gccaatggcc caggatttag gcatttcgga aggggttgcc
     1801 gggcaatcgg tgaccgtgac cgcctttgtg gcaatgtttg ccagtttgtt tattacccag
     1861 acaattcagg ctactgaccg ctgctacgtt gttattttgt ttgccgtttt gctgacgctc
     1921 tcctgcttgc tggtttcctt tgctaactca ttcagtttgc ttttaatcgg tcgtgcctgt
     1981 ctggggctgg cgctgggcgg gttctgggcg atgtcggcgt cgctgaccat gcgtctggtg
     2041 ccgccgcgta cggtgccgaa ggcgctgtcg gtgatcttcg gcgcggtttc tattgcgctg
     2101 gtgattgccg cgccgttggg cagtttttta ggcgagctta tcggttggcg caatgtcttt
     2161 aatgcggcgg cggtgatggg cgtgctgtgt attttctgga ttatcaaatc attgccttca
     2221 ctgccaggcg aaccctcgca tcagaaacaa aatactttcc gcttattaca acgtccgggt
     2281 gtgatggcag ggatgatcgc catcttcatg tctttcgccg ggcagtttgc tttcttcacg
     2341 tatattcgcc cggtgtatat gaacctggcg ggattcggcg tggatggctt aacgctggtg
     2401 ctgttgagtt ttggtatcgc cagctttatt ggtacgtcgc tttcgtcgtt cattcttaaa
     2461 cgttcggtaa aactggcctt agcaggcgcg ccgttaatac tggctgtgag tgcgttggta
     2521 ctgacgttgt ggggaagcga taaaatcgtt gctaccggcg tggcgattat ctgggggcta
     2581 acttttgcat tggttcccgt cggctggtca acgtggatca cccgctcgct ggccgatcag
     2641 gcagaaaaag ccgggtctat tcaggtggcg gttattcagc ttgctaatac ctgtggcgcg
     2701 gcaatcggcg gttatgcgct ggataatatt ggtctgactt cgccgttgat gttgtccggc
     2761 acattgatgt tgctgactgc attgttggtt actgcaaagg tgaaaatgaa gaaatcctga
     2821 tatcaggtaa agaagcgttg gtcagtagtt gttgctgttc ttacatatcc gggcattcta
     2881 ccttacccaa cgcttcccaa taattgctct gattattacg ttccatcgcc acgatggcct
     2941 cgcgtatatg ttgtttattg ttttcatctg acaacattaa cttttcccac gcttcatctg
     3001 ataatgacgc ctgtggcgtg caaattttac gtaaatcttg taataccgtg gttttctctt
     3061 ttgcggactg cagtgagcta aaaggcaact cggcgtatac gatgcctggc atagcgaaaa
     3121 aagtgaaaat aagcagtagt gtcgttggtt tcatggattc aaccttttac aaatgtgtat
     3181 cgaatgaagc ataagtgtag tttgctttca tcgctctcat cattctgtac gaaacgcgct
     3241 tgcgtggtca gtaagaagtg ccagacttta tattccactt ttattccttt ttattcttat
     3301 cgatagcgtt tcgtttttta aaccgcagcg accttaccgc tatagtcagg taatcattaa
     3361 taaaaggata aaaaaatgaa actgacaaca catcatctac ggacaggggc cgcattattg
     3421 ctggccggaa ttctgctggc aggttgcgac cagagtagca gcgatgcaaa acacattaaa
     3481 gttggcgtta taaatggcgc agaacaagat gtcgcggaag tcgctaaaaa ggtggcaaaa
     3541 gagaaatatg gcctcgatgt tgaactggta ggatttagcg gttcgttgct accgaacgat
     3601 gcgacaaatc atggcgaact tgatgcgaat gtcttccagc atcgaccctt tcttgaacaa
     3661 gataatcagg cgcatggtta taaactggta gcggtgggaa atacgtttgt cttccctatg
     3721 gcgggttatt ccaaaaaaat cacaaccgtg gcgcaaataa aagaaggcgc gacagtggcg
     3781 atccccaacg acccgaccaa ccttggtcgc gcacttttac tgttgcaaaa agagaagcta
     3841 attactctga aagagggaaa agggttatta cataccgcgc tggatataac cgataatcct
     3901 cgtcatttgc agattatgga actcgagggg gcgcagcttc cgcgcgtact ggatgatccc
     3961 aaagttgatg tagcgattat cagcaccact tacattcagc agacagggct ttctccggtg
     4021 cacgacagcg tatttattga agataagaat tcgccgtatg tgaatatttt ggtggcacgg
     4081 gaagataata agaatgcaga aaacgtgaag gaatttctgc aatcttatca atcacccgaa
     4141 gtcgctaaag cggcagaaac catttttaac ggtggcgcgg tgcctggctg gtaattctca
     4201 ctcatgccgc gccggacgat ttatttttct ggccggcgac gggaatccat tgaaatcaaa
     4261 atcaccgatg acagaatcag cagcgttccc agccagtccg gtaatgtgaa cgtgatcccc
     4321 agcaacagca aagagagtag cgcgctactt aatggttctg cacagctcaa aatgctggct
     4381 tttggaccgc caattaattg tgctcctttc aggtacagac taaatgtcag ggacgtacca
     4441 atgaccacca aataaaaaaa cgccagaatc aaactgccgt taacgacaaa gtttgttcct
     4501 tgtctggcat aaaaaggcaa cagaatcaga ccgccaatca gcatactcca gccgacgact
     4561 ggtaacgtgc catagcgggc aattagcgtt gagggatagg tggtatagaa tgcagcagca
     4621 aatgccgagg caatgcccca gaacaacgcg gcaggagaga gcgataatga cgtcggatta
     4681 ccgtgtgtca ccaataaaaa agtcccgacc agcgatgtca aaatagcgca gaaaaccaga
     4741 atgcccgggc gcgatttacg caccagtgag aaccaggcga cgataatcgt cggtgagagg
     4801 aattgcagca ccgttgccgt ggctgcgttc gatttttcga tggttagcaa aaaagtgagc
     4861 tgtacagtta gcgcgccaac cacggaaaaa atcagcaggc taatggcatc tttatgattg
     4921 ttaataatag aaaagatttt atcgccatga acaaatgaca gcgtcagtag aatcaaaccg
     4981 gcgaatatca aacgcgtcat agtcaaaaac tgcgacgaca tctggctttg ctccatgatg
     5041 tattgcgcgc agacccctga acttccccac aacacggcgg caatcagaac gttcagcatc
     5101 ccctttctgg tggaacccat ttttccctct gcatactgtt ttgtcgttta tgtatgcagg
     5161 catgatagca aaaatggcga ggatggctct gtttgcgcca cgccgatttt tcttagccca
     5221 gactggtgag ctaaatatct ttaataaaca gcaggcaaat catcgcaata cccaacatcc
     5281 ctatcgccag ccagaacaac gcatggtagc tccagatttc aaccataatt ccgtcaacag
     5341 agccggcgat aatccagccg acgcgtgaag tatttgcata taacgttgtc gcagagccta
     5401 ttttttcagg cattaagtcc tgaaaataaa gcatgcc
//
LOCUS       DADMIB010000225         5394 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.228, whole genome shotgun sequence.
ACCESSION   DADMIB010000225 DADMIB010000000
VERSION     DADMIB010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5394
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.228"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1075
                     /locus_tag="JNZ89_004073"
     CDS             <1..1075
                     /locus_tag="JNZ89_004073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HAY8937762.1"
                     /translation="VEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETA
                     RLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDAANYRSEHLWIVARDGVEVPV
                     SLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELG
                     QQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPE
                     LFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQA
                     YPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDNHLLLLCTDMDSGHGGKSGRFKSYE
                     GVAMEYAFLVALAQGTLPATPAD"
     gene            complement(1072..1734)
                     /gene="exoX"
                     /locus_tag="JNZ89_004074"
     CDS             complement(1072..1734)
                     /gene="exoX"
                     /locus_tag="JNZ89_004074"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease X"
                     /protein_id="HAY8937763.1"
                     /translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPIS
                     PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL
                     ARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQ
                     MADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWSFNNLDSMSPELRLTLKHYLE
                     NT"
     gene            complement(1758..2414)
                     /locus_tag="JNZ89_004075"
     CDS             complement(1758..2414)
                     /locus_tag="JNZ89_004075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HAY8937764.1"
                     /translation="MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPS
                     LSLLACDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPW
                     RKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARR
                     LQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
                     "
     gene            complement(2516..2746)
                     /locus_tag="JNZ89_004076"
     CDS             complement(2516..2746)
                     /locus_tag="JNZ89_004076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HAY8937765.1"
                     /translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQ
                     PEHLRSWFRERLIAHRLASVKLSRLPYEPKLK"
     gene            2885..3259
                     /gene="yobA"
                     /locus_tag="JNZ89_004077"
     CDS             2885..3259
                     /gene="yobA"
                     /locus_tag="JNZ89_004077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopC domain-containing protein YobA"
                     /protein_id="HAY8937766.1"
                     /translation="MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAA
                     PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYT
                     VDWHVVSVDGHKTKGHYTFSVK"
     gene            3263..4135
                     /gene="copD"
                     /locus_tag="JNZ89_004078"
                     /pseudo
     CDS             3263..4135
                     /gene="copD"
                     /locus_tag="JNZ89_004078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416354.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
     gene            4148..4489
                     /locus_tag="JNZ89_004079"
     CDS             4148..4489
                     /locus_tag="JNZ89_004079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebY family protein"
                     /protein_id="HAY8937767.1"
                     /translation="MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV
                     MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGEKMSL
                     APFIERAEKLC"
     gene            complement(4871..5341)
                     /locus_tag="JNZ89_004080"
     CDS             complement(4871..5341)
                     /locus_tag="JNZ89_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8937768.1"
                     /translation="MDLALVTGQRREDITNMRFSDIYDDRLHIRQIKTGMMIAIPLSL
                     SLPVAGLRLGAVVEQCRMVSRGDYLISAGIRKNSPDGSIHPDGLTKKFVAARKLTGIQ
                     FSENPPTFHEVRSLAGRLYKETCGEEFAQRLLGHTSEKTTKMYLDEREKTYLLL"
BASE COUNT         1336 a         1282 c         1347 g         1429 t
ORIGIN      
        1 ggttgaagag cgtcagcgcg ggttaaccag tttgcgccaa attaaccgca agacccggga
       61 agtcattggt attgcctttg atgatccagc ctatgtgacc tggattgcct acaatccaga
      121 acctgaaacc gcgcgattgc gttatggtta ttcttccatg accacaccag acactttgtt
      181 tgaactggat atggataccg gtgagcgtcg tgtattaaaa caaacggaag ttcctggttt
      241 tgatgcggcg aattaccgca gtgaacacct gtggatagtc gcccgtgatg gcgtcgaagt
      301 tccggtttcg ttggtctacc atcgcaaaca ttttcgcaaa ggacacaacc cgttgctggt
      361 gtatggctat ggttcttacg gcgcaagtat tgatgccgat ttcagtttta gccgcttgag
      421 tttgttagat cgtggctttg tctacgccat tgtccatgtt cgcggcggtg gtgagctggg
      481 gcaacaatgg tacgaagacg gaaaatttct gaagaagaaa aatacgttta atgattatct
      541 tgatgcctgc gatgcattgt taaaactggg ctatggctct ccttcgcttt gttatgcgat
      601 gggcgggagt gcggggggca tgttgatggg cgttgcaatt aatcaacgcc cggaattatt
      661 ccacggcgtt atcgcccagg taccgtttgt tgatgttgta acaacgatgc ttgatgaatc
      721 aattcctctt accactggtg agtttgaaga gtggggtaac ccgcaggatc cgcaatatta
      781 cgagtacatg aaaagctaca gcccgtatga caacgtcacc gcacaggctt atccgcattt
      841 actggtaacg accggtttac acgattctca ggtgcaatat tgggaaccgg caaaatgggt
      901 cgctaaattg cgcgagctga aaaccgataa ccatctttta ttgctctgta ccgacatgga
      961 ctcaggccat ggcggtaaat ctggccgctt taaatcgtac gaaggcgtag cgatggaata
     1021 tgcttttctg gtcgcgctgg cgcagggaac attacccgct acgcctgcgg attaagtatt
     1081 ttccagataa tgtttcagtg ttaaacgcag ctccgggctc atgctgtcca ggttattaaa
     1141 tgaccagcgc agatagcccg gatcgcgttc ggcaacgtcg gaaaccgctt tgccacggta
     1201 tttgccaaag gtgaaggtcg tcatcaacga cggacgtccg gtgatatcgg ccatctgttc
     1261 tgccgtccag ccggaggtgt tcataatatc gataagcaac gcggcggtga tataacagtc
     1321 atacaacgcg cggtgatgat gcaggcccgg cggcgtctgt acattgagct tccgtgtttt
     1381 atataacgcc atattgctgt acttgatccc tggccacaaa cgacgggcca gtttcatagt
     1441 gcaaatccac tcaccgggca tctcaggcag tacgcggcgg tcaaagctgg cgttgtgcgc
     1501 gacataccat tcactaccgt aatagtgtgg gatcacatct tcaatccacg gtttatcggc
     1561 gaccatggct tcggtgatgc gatgaatcgc catcgcttgt ggactaatag gacgatcggg
     1621 gcgcaccagg tggctcatgg ggttgacgat ttttccgtca atgacatcaa cagaggcaat
     1681 ctcaacgatc cctccctgca aaccgcaggt ttctgtatcg ataatgcgca acatggcatg
     1741 ctccaggccg aaaaagccta gcgtaatgga atgatatcgc cttgccaacc ctgtgatgaa
     1801 cgctgaccga ctaacaataa tgaaccacga tcggcgcgaa cgatgagacg accatattca
     1861 tcccatagtg cactgttacc acgggcattt gccatcagca cggcaatcga gtactgatgt
     1921 gaaaaaaatt gtaagcgacg ggccgacgcc agcaggtcgg gttctcccag acattgccct
     1981 gtagtaaaca gtgaacaggt cgggtccata tccatacctt gcggttgttc atcgaccacc
     2041 gtgatggttc tggaacgacg gcccagacat gcaccatgac tctgatggta gatcccaggc
     2101 gtttttcgcc acggtgcgaa caccgcaatt ccacgaataa agcgatcgtt atattcaacg
     2161 ggaaggccgg caatgatggt cattcgccag gtcgttgcgg cataacaaag cgggtctaac
     2221 agtgagagat cgggtggggc aggaagggca cgtcgcgaat aatcacacgc cagtaaagaa
     2281 agcgatggaa aaactaacag ctgacattgt tgcctggcgg cggccctcac aaactccaga
     2341 tgatgagcta cctgttcggt gagtgaggtt ttacgaggct catattgcgc tgctgcaact
     2401 ttccagaacg acataatgac ttccttttca aaatgactgc aaattatggg tgcggtttag
     2461 aaaatactca taatttagca ggcgttatgt aagaaagtgt aactctgtat aagttttatt
     2521 taagtttggg ctcgtaaggt aaacgtgaca gtttgaccga agccaaacgg tgggcaataa
     2581 gcctctcgcg aaaccagctg cgcaaatgtt caggctgttc acgttcaacc gcttcagcga
     2641 tcaccggcat attgtagcgt tctttaaatg ccaccccggc cgccgccaaa tcgacattca
     2701 ctttatccat ttctgtttga tccagtttag ccagattctt cagcattctt aatctcctca
     2761 tcattcgcgg gcaaaagtta ctaagagtga gccaggatgg caagccggaa ttgatgatcc
     2821 tcgactcaga cattagacaa ggttatgctc tgtaaaaaag ttattacaaa aagtaataga
     2881 taatatggct tcaactgcac gctcccttcg ctacgcgctg gcaatcctga ccacttcgtt
     2941 ggtgacacct tccgtctggg cacatgcgca tttaacgcat cagtatcctg cggcaaacgc
     3001 gcaagtgaca gctgcaccgc aggcaatcac tttaaacttc tcggaaggtg ttgaaacagg
     3061 attcagtggt gcaaaaatca cggggccaaa aaacgaaaat attaaaacat taccggcgaa
     3121 gcgaaatgag caggaccaaa agcaactgat tgttccactg gccgattcgc tgaaacccgg
     3181 aacctacacc gttgactggc atgttgtttc ggtggacggg cataaaacga aaggacacta
     3241 cacctttagc gtgaaataaa tcatgctggc gtttacctag atcgcgctgc gatttatcca
     3301 tttcacctcg ctgatgctgg tttttggctt cgcaatgtac ggtgcctggc tggccccctt
     3361 gacgattcgt cgcttgctgg cgaagcgttt tctgcgttta caacagcacg ctgccgtctg
     3421 gagtttgatc agtgccactg caatgctcgc cgttcagggc gggttgatgg gaacgggatg
     3481 gacagatgta ttttcgccaa acatttggca ggctgttttg caaacgcagt ttggtggcgt
     3541 ctggttatgg caaattgttc tcgccctcgt aacgttgatc gtcgccctta tgcaaccgcg
     3601 gaatatgcca cgtttgctgt ttatgctcac taccgcgcaa tttattctgc tggcgggagt
     3661 ggggcatgcg acgctgaatg aaggggtaac ggcgaaaatc catcagacta atcacacgat
     3721 tcacctgatt tgtgcggcgg cgtggtttgg gggattactg ccggtgctct ggtgtatgca
     3781 actcatcaaa ggccgttggc gacaccaggc tattcaggcg ctgatgcgtt tttcatggtg
     3841 cgggcatttt gcggtgatcg gcgtactggc aagcggcgtg cttagtgcat tgttgattac
     3901 cggatttccc cccacgctta cgacttactg gggccaactc ttattgctca aagccatcct
     3961 ggtgatgatt atggtggtca ttgcgctggc taatcgttat gttcttgtac cgcgcatgag
     4021 gcaggatgaa gatcgtgcgg caccctggtt tgtgtggatg actaaactcg aatgggcgat
     4081 aggtgcggta gtgctggtga tcatcagcct gcttgcgact ctcgaacctt tttgatggat
     4141 tacgaaaatg atgaaaaaaa gtattctggc gtttctgtta ctcaccagtt ctgcagcggc
     4201 gctggctgca ccgcaggtga ttaccgtcag tcgttttgaa gtgggtaaag acaaatgggc
     4261 gtttaatcgc gaagaggtga tgctgacttg ccgaccgggt aatgctttgt atgttattaa
     4321 tccgagtacc ctcgtgcagt atcctttaaa cgatatcgca caaaaggaag ttgccagtgg
     4381 gaagaccaat gcccaaccca tttcggtgat tcagattgat gatcctaaca atcccggcga
     4441 aaaaatgagt ctggcaccgt ttatagaacg agctgaaaaa ctctgttaat tacctaaaat
     4501 agccttttga tttccaataa aaaaaccgcc tcagttcttt caccagaacg ggcggtttta
     4561 acatttcagc tgatgaccac cacgcttttt attgaccatt ttgcacgcaa actggaaaac
     4621 ctggcgtcgt catctattct taaagggcaa ggcaactaag cctgcattaa tgccaacttt
     4681 tagcgcacgg ctctctccca agagccattt ccctggaccg aatacaggaa tcgtattcgg
     4741 tcttttttta attgcatttg aaatcaatta gttgcaaatg tctccccgaa atttactcga
     4801 atttctgtat tccggtcttt tttggttata tcacaaccaa aatacattta acaatccatt
     4861 tacgttaaaa tcagagcagt aagtacgttt tttctctctc atcaagatac atttttgttg
     4921 tcttctccga tgtgtggcca agtagacgct gagcaaattc ttctccacat gtttctttgt
     4981 acaatcgtcc agccaggctt ctgacttcgt gaaaagttgg tgggttttca ctgaactgga
     5041 tacctgttaa ttttctggct gcgacaaatt tctttgtcag gccgtccggg tgaatgctgc
     5101 cgtcagggct gttttttcta atcccggcac tgattagata atccccccta cttaccatgc
     5161 ggcactgttc aactactgca ccaagtcgta aaccagcgac aggaaggctg agtgacaggg
     5221 ggatagcaat catcattcct gtcttaattt gcctgatgtg gagacgatca tcataaatat
     5281 cactgaaccg catattcgtt atgtcttcgc gacgttgtcc tgttacaagg gctaaatcca
     5341 tagctaatgg gaaccatgcc ggaagttgat ctgctgcctc cctgatgcag ttgt
//
LOCUS       DADMIB010000226         5337 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.229, whole genome shotgun sequence.
ACCESSION   DADMIB010000226 DADMIB010000000
VERSION     DADMIB010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5337
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.229"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(890..1831)
                     /gene="fabY"
                     /locus_tag="JNZ89_004081"
                     /gene_synonym="yiiD"
     CDS             complement(890..1831)
                     /gene="fabY"
                     /locus_tag="JNZ89_004081"
                     /gene_synonym="yiiD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid biosynthesis protein FabY"
                     /protein_id="HAY8937769.1"
                     /translation="MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAH
                     HQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGV
                     KRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQ
                     LQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWG
                     LIWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQM
                     QVEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE"
     gene            complement(1876..2313)
                     /gene="dtd"
                     /locus_tag="JNZ89_004082"
     CDS             complement(1876..2313)
                     /gene="dtd"
                     /locus_tag="JNZ89_004082"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000560980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HAY8937770.1"
                     /translation="MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANR
                     LCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRA
                     EALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV"
     gene            complement(2310..3183)
                     /locus_tag="JNZ89_004083"
                     /pseudo
     CDS             complement(2310..3183)
                     /locus_tag="JNZ89_004083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312836.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
     gene            complement(3177..3776)
                     /gene="yihX"
                     /locus_tag="JNZ89_004084"
     CDS             complement(3177..3776)
                     /gene="yihX"
                     /locus_tag="JNZ89_004084"
                     /EC_number="3.1.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphatase"
                     /protein_id="HAY8937771.1"
                     /translation="MLYIFDLGNVIVDIDFNRVLGAWSDLTRVPLATLKKSFHMGEAF
                     HQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHR
                     VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD
                     TVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC"
     gene            complement(3917..4804)
                     /locus_tag="JNZ89_004085"
     CDS             complement(3917..4804)
                     /locus_tag="JNZ89_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HAY8937772.1"
                     /translation="MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHD
                     GARITSLKAFGSEVLRQWQPQRRAFQYGCFPMVPWAGRLGNATLNAGGQCYSLPANKP
                     PHALHGMACYSTWEIIDKTADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHS
                     YADTFPASAGWHPWFAKKLTPQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWD
                     DCFGFYNGVKVKLLWPGKLAMTMISSANSLVVFDKQPDATCINPLTQAPNAINLTPEL
                     VTPDRPLVIETRWQFTPES"
     gene            complement(4794..>5337)
                     /locus_tag="JNZ89_004086"
     CDS             complement(4794..>5337)
                     /locus_tag="JNZ89_004086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HAY8937773.1"
                     /translation="GIVYISSQLVLSRDIPLTGMLIASAIGIFSCPLVGWLSDRIGQK
                     SLYLSGAGFCVLFAFPFFLLLDSKSTLIIWCSMILGYNLGPTMMFAVQPTLFTRMFGT
                     KVRYTGLSFAYQFSAILGGLSPLIASSLLALGGGKPWYVALFLFAVSVLSFVCVWLIE
                     PTDEQETASYRYIREQSHEN"
BASE COUNT         1441 a         1345 c         1253 g         1298 t
ORIGIN      
        1 tgataaatga agaaaaaccg tattcatcgc cattaccacc accttaccta tattactcat
       61 taatgtatgt gcgaaaatta cgccggaaaa tcattaaaaa aaagcggatt tttgcatgtt
      121 gttttgtttt tgcgaggcgt tttccagaaa taataagagt gttgcagttg tttcatttat
      181 tactcaaaaa tggtttagtt atcgcccagg atgaattatg ggtgctatga atatattata
      241 ttcagagata tttatttgca taatctgaat ggtgtagccg aaaaacgtca gcatcctaac
      301 agcaccagga tttaaggtga aattaatctt tcatcacaga ccggtcagta ctgccaccaa
      361 ccggtcttta cttgctcatc gttataattt tgttggtaac agttcgggaa agttgttttt
      421 ctaaattaac aacagaataa ctttcttgtt taatgagatt aatattggca accattatag
      481 cctccttccc acggtttaag agcaaacata caacataatg attcataaca tacagagcag
      541 taaatgaatg atactgacaa tgatgccagc ccattatctt tgcataatgt ttgtgagcta
      601 tagattttaa aaatatttat gaggaaagta tggcaccaga ggaggttttg actatcaaaa
      661 atcgctcaaa cctgaactaa gatgatgagt taagcattat ctgcgataat tgccactcag
      721 ctctacaaat aatatttaaa tgctcctgaa cagtgatgta gcaagacacg tatggtgcca
      781 acgaagaata aaaatttata gagttcttat tcaatattac cggcatagac agggaatgat
      841 gtaaatgacc ggaatgaatg agagaggcag caccgcccct ctccataagc tactcttctt
      901 cgttcccgcc ctcttcatac gggccaaatg gcttcgcggg cagaacgata tacgtgcctt
      961 caaacactgc acccggcgtc tcgtcgccaa agatttcaac ttgcatctgc acccgtgctt
     1021 ttcgtccgcg cgccagacgg tcgagatcgc cgcttaaggc accaaggtcg gctaccgcat
     1081 gaggtttacc gctaatcggc ttgctgtagc ggatatgcgc atcggccaga ataatcgttc
     1141 cgccgaggtg gcgttcgcgc agcatcagcc agataagccc ccaaccggtg agcgttgcca
     1201 gcgagaataa actcccggca aacagcgtat ggtgcggatt ctgattaccg gtttccggca
     1261 tggtggtgat aaatttttgc ccggtatatt gctgaatgcg cacgcccatt ttttcactaa
     1321 gcgggatgtg ttcgtaccac gcctgttgca gctgcgcgca ccagtcgccg cgatgcaaaa
     1381 tatcatccag agtggcaaca ggtttaatca tcaaaaaatg gcgaatcggc gtggtggttg
     1441 gtgtggtgat ttctccctga ttaacaaacc ccagcttggc gaaaaactcc accgcgtctt
     1501 cacgggcgct acaggtcacg cgcttaacgc cttcctgacg cgccaccgac tccagggtca
     1561 tcgccatcaa cgtccccagc cctttgtcct gcacgtcggg atgaacggcc ataaagcgaa
     1621 tggacgcttc attgtcggca ttaatataca gtcggcctac cgccaccaga ttcccctgct
     1681 cgtcgacgac catctgatga tgcgccatcg catcccacgc gtcgcgttcc gaaccttttg
     1741 gttgatgcag gggcttacgc aacatttccc agcgaaactg atagtaacgc tctaactctt
     1801 cttctgtttg tggaacccga aggtgataca tagcgatact ctctcttgtt tcccgtgaca
     1861 accctggaag ctggctcata cctgcaacca gaatgtcacg gggccatcat tgaccagcga
     1921 tacctgcata tcggcagcga agcgtcctgt ttgcgtgttc atctcttgct ggcggcagcg
     1981 ttcgacgaaa tagtcatata acgcctctgc gcgatccggt gatgcgcctt tggagaaact
     2041 tgggcgcatc ccccgttcgg tatctgcggc gagggtaaac tgggaaacca ccagtacact
     2101 gccgcccgcc tgttgcacgt tgagattcat cttgccttcg gcatcgctaa agatgcggta
     2161 gccgagcaca cgctcgcaca gacggtttgc tttctgttcg tcgtcatcct tttcgacacc
     2221 caataacacc aaaagtcccg cgccaatttc gcccgtcact tctccctcca cggtgacgct
     2281 ggcacgggtt acgcgttgaa ttaatgcaat catggttcgt cgtcttcttc ttgttcagct
     2341 gcttgtttta gtttgcggta ttccccgaga gtgacagtaa tttccgcgcc aagcaagacg
     2401 atacaccatg tccagtagac ccaaacaaag agaatgggga tcaccgccag cacaccgtaa
     2461 atgagctgat atgacgggaa catggtgata taaagcgcga aacctttctt tcctgcttcg
     2521 aacaggagtg cggcgacaaa cgcgccgaca atcgcgtcgc ggttaggtac gcggatggta
     2581 ggaacaatgc tgtacagcaa ccagaaggag atccacgaca acagcaacgg aaaaatacgc
     2641 agcacgttgt cgatgacagt attgagatcg ctcgcccagc gcagggagag caaataggaa
     2701 ctgatcgcca gactggcccc tgccagcagc ggccccagcg ttaaaatcat ccagtacacg
     2761 gcgaacgagt aaatttttgg tcgcgctcgt ttactgcgcc agatggtatt caacgcgcta
     2821 tcgatggagt acatcaacaa taacgcggtg acgatcagcc cgcacgcccc aacggcggtc
     2881 atcttgttgg aattggcaac aaattgttcg atataccgct gaataacatc gccagtagca
     2941 ggcagaaagt tggcaaaaat aaagtgacgt aactgaatgc tgacgtcgga aaacatggga
     3001 aaagcggcga aaagcgcaaa aacaacggca accagcggca ctaatgagag caacgaccac
     3061 ataggcaagg ttacctgcca gggttgtcat gttgtcctca tcaatacgtt gccagagtag
     3121 ttttagccag gcccatagtg gacgggtacg gtgcctggct ttgtcctgaa tggtttttag
     3181 cataacacct tcgcgaaata gtccgggatg gtggttttat ctttcaccag aatactggta
     3241 atgcccagct gattggctcc ttctatatta tcggcgttat cgtcgaaaaa gaccgtatcg
     3301 ctgggtgaaa aaccttccgc ctgcaaaaca tgctggtaaa ttcgtgcttc aggtttgcgc
     3361 atccccagat cttgcgacag atagatatgg tcagcagcat cacgaatttc cgggtattct
     3421 tccggccaga aggtggtatg caggcggttg gtattggaaa gcaccaccac gcgatgcccc
     3481 tgctcacgca gtttatgcat gatggcgatc acttccgggc gcagcgcaac aaacaccgcc
     3541 tgccagccgt gagagaactg ctcgtagctt agcggtagag ccatctcatg acacagcgcc
     3601 tctgcgaacg cttcgtcgct aatttcccca cgctcatgct gatgaaacgc ctcccccata
     3661 tgaaaactct tcttaagcgt agccagtgga acacgcgtta aatcgctcca ggctcccagc
     3721 acacggttaa agtcgatatc gacaatcaca ttacctaaat caaagatata gagcattttt
     3781 gcctcctttc gcgccacaag aaattaactg tagcgggaaa ggatgggttt ggctatgtgg
     3841 caataagggt aatcttgtga tgctgattgc gaaaaagcag agtaatttca ctggcttttt
     3901 cgcaatagat gaatggttaa gattcaggtg taaattgcca acgagtttcg atgaccagcg
     3961 gcctatctgg tgtcaccaat tccggcgtta gatttattgc gttaggtgcc tgagtcagcg
     4021 ggttaataca ggtggcatcg ggctgtttat caaataccac cagactgttt gcagaagaga
     4081 tcatggtcat cgcgagttta ccaggccaca gtaacttaac cttcaccccg ttataaaaac
     4141 caaaacagtc atcccaggga ccggcttgag gagagatacg atttccagtt ggcagttcat
     4201 cactacccgc ttcttcttgc cagtccgcat caaaaagcac ctgcaacgat tctgtatttt
     4261 gcggagtcag ctttttcgca aaccacggat gccagccagc ggaggccggg aatgtatcgg
     4321 catatgaatg gacttccagt tgcaaaacca gcgcatcgtt ctccagcaaa aaagtctgaa
     4381 tcacttcccc ttgccagggc cacggtgaag ccaggggcat acgtaaagtc agggaatctg
     4441 ctgttttgtc gatgatttcc cacgttgagt aacaagccat accatgcaac gcatgtggtg
     4501 gtttattggc gggtaaagaa taacattgcc caccagcatt cagcgtcgca ttccccagtc
     4561 gccctgccca cggcaccatt gggaaacagc catactgaaa agctctgcgc tgcggctgcc
     4621 attggcgtaa tacttcagaa ccaaatgcct ttaacgaggt tatcctggca ccatcatgcg
     4681 gataaatctg caggtgaata ttgccttttt ccagcgtcac taactctcct acaggcccag
     4741 gccatggcgc gtcaaacgcc tgttgtagcg ccaggtaatg ctcgtttttt cgttcagttt
     4801 tcatgagatt gttccctgat gtagcggtaa gaagcggttt cttgttcatc ggtcggctca
     4861 atcagccaga cgcaaacaaa ggaaagaact gagacagcaa ataaaaacag agcgacatac
     4921 cacggttttc ctccccctag cgccagcaaa cttgaggcga taagggggct tagtccgcca
     4981 agaatcgcgg aaaattgata agcaaaagaa aggccggtat atcgtacttt ggtaccgaac
     5041 atgcgggtga aaagtgttgg ctgcacggca aacatcatcg tcggacctaa gttgtagccg
     5101 aggatcatac tgcaccagat gatgagcgta cttttgctat ccagtaataa gaagaaagga
     5161 aacgcgaaca ggacacaaaa tcctgctccc gacaaataca gacttttttg acctatacga
     5221 tctgataacc atccaaccaa tggacaactg aaaataccga tcgccgaggc aatcaacata
     5281 cccgtcaggg gaatatctcg cgacaatact aattggctgg aaatatagac aatacca
//
LOCUS       DADMIB010000227         5318 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.230, whole genome shotgun sequence.
ACCESSION   DADMIB010000227 DADMIB010000000
VERSION     DADMIB010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5318
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.230"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1279
                     /locus_tag="JNZ89_004087"
     CDS             <1..1279
                     /locus_tag="JNZ89_004087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4132 domain-containing protein"
                     /protein_id="HAY8937774.1"
                     /translation="EFVWDLFTAWLTAGAPSKESWAFTALGVLGNDDTARKLTPLIRA
                     WPGESQHKRATVGLDILAAIGSDIALMQLNGIAQKLKFKALQERAKEKIADIAESREL
                     TVAELEDRLAPDLGLDDNGSLLLDFGPRQFTVSFDETLKPFVRDASGSRLKDLPKPNK
                     SDDESRSNDAVNRYKLLKKDARIVAAQQVARQESAMCLRRRWSPENFKLFLVEHPLVR
                     HLTRRLIWGVYSAENQLQACFRVAEDNSYSTADDDLFTLPEGGISIGIPHVLEISPTD
                     AAAFGQLFADYELLPPFRQLDRNSYALTGAERNASELTRWAGRKCPSGRVMGLANKGW
                     IKGTPQDGGWIGWMIKPLGRWSLVMEIDEGFAVGMSPAELSAEQLLSKLWLWEGKAES
                     YGWGSNSTQEAQFSVIDAITASELINDIEALFE"
     gene            1289..1531
                     /locus_tag="JNZ89_004088"
     CDS             1289..1531
                     /locus_tag="JNZ89_004088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005069643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HAY8937775.1"
                     /translation="MDKELPWLADNAQLELKYKKSKTPLSHRNWPGEPVSVITESIIQ
                     TLGDELLQKAEKKKRLSGVMKIFHWSGSPPSRRPST"
     gene            3055..4920
                     /locus_tag="JNZ89_004089"
                     /pseudo
     CDS             3055..4920
                     /locus_tag="JNZ89_004089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001343820.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4132 domain-containing protein"
     gene            4982..>5318
                     /locus_tag="JNZ89_004090"
     CDS             4982..>5318
                     /locus_tag="JNZ89_004090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937776.1"
                     /translation="MIVQKELVAIYDYEVPVPENPFSFRLEIHKCSELFTGSVYRLER
                     FRLRPTFHQRDREDVDPLINDALIYIRDEFIDERKLRGESPEPVPVIFNCELQNIFNQ
                     LIEYYFIKVG"
BASE COUNT         1370 a         1341 c         1365 g         1242 t
ORIGIN      
        1 tgaatttgtc tgggatctgt ttaccgcctg gctgactgcg ggcgcgccgt cgaaagagag
       61 ttgggcgttt actgcgttag gcgttctcgg taacgatgat accgctcgca aactgacgcc
      121 attaatccgc gcctggcctg gtgaatccca gcataaacgc gccaccgttg ggttggatat
      181 tctcgccgct atcggtagtg atattgccct gatgcagctt aacggcatcg cccagaaact
      241 taaattcaaa gcattacagg agcgggcaaa agaaaaaatt gccgacattg ccgagagccg
      301 cgaactcacg gtggcggagc ttgaagatcg gttagcaccg gatctcggtc tggatgataa
      361 cggttcgttg ctgctggatt tcggcccacg ccagttcacc gtcagctttg atgaaacctt
      421 aaaaccgttt gtgcgtgacg cttccggcag ccgcctgaaa gacctgccca aaccaaacaa
      481 aagcgatgat gaatcgcggt cgaacgatgc ggttaaccgc tacaaattgc tgaaaaaaga
      541 tgcgcgtatc gtcgccgccc agcaggtagc aaggcaggaa tccgccatgt gcctgcgtcg
      601 ccgctggtcg ccagaaaact ttaagctctt cctggttgag catccgttgg ttcgccactt
      661 aacccgccgt ctgatttggg gcgtttatag cgccgaaaac cagctacagg cgtgctttag
      721 ggtggcggaa gataacagct acagcaccgc tgacgatgat cttttcaccc tgccggaagg
      781 cggtatctct atcggcattc ctcacgttct ggaaatatca ccgacggatg ctgccgcctt
      841 tggtcagctt tttgccgact acgaactgct accaccattc cgtcagcttg accgtaacag
      901 ttacgccctg acaggagccg agcgcaacgc cagcgaactg acccgctggg caggcagaaa
      961 atgcccgagc ggtcgggtca tggggctggc gaataaaggc tggataaagg gcaccccgca
     1021 ggatggaggc tggatcggct ggatgatcaa acccctgggc cgctggtcgt tagtcatgga
     1081 aatcgatgaa ggttttgcgg taggcatgtc gccagccgaa ctcagcgctg agcagctctt
     1141 aagcaagctg tggctatggg aaggcaaagc agaaagctat ggctggggga gtaattcaac
     1201 acaggaagcg cagttctccg taatcgatgc catcaccgcc agcgagctaa ttaacgatat
     1261 tgaagccctg tttgaataag gaaagagcat ggacaaggaa ttaccgtggc tggcggataa
     1321 cgcccaactg gaactgaaat ataaaaaaag caaaacgccg ctcagtcatc gcaattggcc
     1381 gggcgaaccg gtgtctgtta tcactgaaag catcattcag acactgggtg atgaattgct
     1441 acaaaaagct gagaagaaaa aaagattgtc tggcgttatg aaaatttttc actggagtgg
     1501 cagtccgcca tcacgcaggc catcaacttg atcggcgaac acaaaccctc agtcccggcc
     1561 cggacaatgg cggcgctagc ctgtatcgcg caaaatgaca gccaacagtt gctcgacgaa
     1621 atcgtccaac aagaggggct ggaatatgcg actgaggtgg taattgcacg cctgtttatt
     1681 gcgcggtgtt atgagagtga tcctctggta gtgacattgc agtatcagga cgaggattat
     1741 ggctatggtt atcgctcaga aacctataac gaattcgatc tccgactgcg taagcatctc
     1801 tctctggcag aggaaagctg ctggcagcgt tgcgccgaca aactcattgc cgcactacca
     1861 ggaataacca aagttcgccg cccttttatt gcgctgatcc tcccggaaaa accagaaata
     1921 gccaatgagt tggtaggcct tgaatgcccg cgaactcatt ttcattctaa gaagtggtta
     1981 aaagttgttg ctaatgaccc cacagcggtg agaaaactcg aacactactg gagccaggat
     2041 atatttagcg atcgagaagc cagctacatg tcgcatgaaa accacttcgg ctacgcggcc
     2101 tgcgccgccc ttttgcgcga acaaggactg gcagccattc cgcgcctcgc gatgtatgcc
     2161 cataaagaag attgcggcag tctgctggta caaattaacc atccgcaagt catccgcacc
     2221 ttgctactgg tggctgataa aaacaaaccc agcctgcaac gtgtagctaa ataccataaa
     2281 aacttccccc atgcgacgct cgccgcactg gcagaactgc tggcgttaac agaaccacca
     2341 gcccgccctg gttatccaat catcgaagac aaaaagctgc ctgcacagca aaaagcacgc
     2401 gatgaatact ggcgtacgct gttacaaacg ctgatggcat cgcagccaca actggcagaa
     2461 gaggtgatgc agtggttaag tactcaagcc agggcagtgc tgaatagtta tttatcggca
     2521 ccgcccaaac cggttattga tagtaccgat aacagcaatc tgcctgaaat cctcgtttcg
     2581 ctaccgtggc gtagtaagaa aaaaatgaca gctccacgtc ttgatttggc accgctcgaa
     2641 ttaactccgc aagtttactg gcaaccaggc gaacaagaga ggcttgccgc cactgagtct
     2701 gcccgttatt tcagcacgga atctcttgcg caacgcatgg aacaaaaaag tggacgagtt
     2761 gtattacagg aactgggttt tggggatgat gtatggctgt ttctgaatta tatactcccc
     2821 ggaaaactgg atgctgcacg caattcactc attgttcagt ggcattacta ccaggggcgg
     2881 gttgaagaga tcctgaatgg ctggaactcc ccggaagcac aattagcaga acaggcgctc
     2941 cgcagcggtc acatagaagc gttaattaac atatgggaaa atgacaacta ctcacgttat
     3001 cgtccggaaa agagtgtctg gaacctgtat ttattggcac agttgccgcg tgagatggct
     3061 ttgaccttct ggctgcgtat caatgagaaa aagcatctgt tcgcgggtga ggactatttt
     3121 ctcagtatcc tcggattgga tgcgctacca ggtctgctgt tggctttttc acatcgtcca
     3181 aaagaaacat ttccgttaat tttaaatttt ggcgcaacag aactggcgct gcctgttgcc
     3241 cgcgtctggc gacgtttcgc ggcgcagcgt gatctggctc gccagtggat tttacaatgg
     3301 ccggaacata cggctagtgc acttatccct cttgtcttta ccaaacccag cgataatagc
     3361 gaagccgcat tacttgccct gcgtttactg tacgaacagg gacatggcga attgctacaa
     3421 accgtggcaa accgctggca gcgtacagat gtatggtctg ccctggagca gttgcttaaa
     3481 cagggtccaa tggacattta cccggcacgc attccaaaag cccctgattt ctggcatccg
     3541 gcaatgtggt ccaggcctcg acttatcact aataatcagc ctgttaccgg tgacgctctg
     3601 gaaattatcg gcgaaatgct gcgctttacc taggggggac gtttttatag cgggctggaa
     3661 caactgaaaa cgttctgcca gccacaaacg ctggccgctt ttgcctggga tctcttcact
     3721 gcctggcaac aagcgggggc ccccgcaaaa gacaactggg catttctggc attacgtctc
     3781 tttggtgacg aaagcacggc acgggatctg acgacacaga tcctcgcctg gccacaagaa
     3841 ggcaaatctg cccgtgctgt cagtggtctg aatatactta ccctgatgaa taatgatatg
     3901 gcgctgatgc agctgcatca tgtatcacaa cgggcgaaat cacgcccctt acgtgaaaac
     3961 gcagcggaat ttcttcaggt ggtcgcagaa aatcgcgggc taagccagga agagttagcg
     4021 gacagattag tcccaaccct gggccttgat gatccgcagg cgttgagttt tgattttggt
     4081 ccccggcagt ttaccgttcg cttcgatgaa aacctcaacc cggttatctt tgatcagcaa
     4141 aacgttcgcc agaaaagcgt tccccggttg cgcgccgatg acgatcaact gaaagcgccc
     4201 gaggcactgg cccgactaaa agggctaaaa aaagatgcta ctcaggtgag caaaaacctg
     4261 ctcccgcgtc ttgaagctgc cctacgtacc acccgacgct ggtcgctggc agattttcat
     4321 tctctgtttg ttaatcatcc ctttacccgt ctggttaccc agcgattaat atggggggtt
     4381 tatccggcaa atgaaccgcg ttgtttactc aaagcctttc gtgtggccgc agagggggag
     4441 ttctgcaatg cgcaagatga gccaattgac ctgcctgcgg acgctctgat tggcattgcc
     4501 cacccgttag aaatgacagt agaaatgcgc agtgaatttg cacagctttt tgccgattac
     4561 gaaattatgc cgccttttcg ccaattgtcg cgccgcacgg tgctgctcac acctgacgag
     4621 tcaaccagta acagcctgac tcgctgggaa ggtaaatccg ctaccgttgg gcagcttatg
     4681 ggaatgcgat acaaaggctg ggagtcaggt tatgaggacg catttgtcta tgacctgggt
     4741 gagtaccggc tggtccttaa gttttcaccc ggttttaacc actacaatgt tgatagcaaa
     4801 gcgctaatga gcttccgttc tcttcgagtg taccgtgaca ataaatccgt cacttttgcc
     4861 gaacttgatg tgtttgattt gagtgaggcg ttaagcgcac ctgacgtcat tttccattaa
     4921 aaacacagcg ggcagtgatg caactgcccg ttatcaacac gacttaccag cggggaaagc
     4981 gatgatcgtg caaaaagagc tggttgctat ttacgattat gaggtccctg tacctgaaaa
     5041 tccgttttcc ttcagacttg agatccataa atgctctgaa ttatttacag gttccgtcta
     5101 tcgactggaa cggttccggc tacgtccaac atttcatcaa cgtgatcgag aggatgttga
     5161 cccgctaata aatgatgcgt tgatttatat aagagatgag tttattgatg agcggaaatt
     5221 acgaggtgaa tcacctgaac ctgtaccagt aatttttaat tgtgaactac agaatatatt
     5281 caaccaacta atagaatatt actttattaa agtgggaa
//
LOCUS       DADMIB010000228         5208 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.231, whole genome shotgun sequence.
ACCESSION   DADMIB010000228 DADMIB010000000
VERSION     DADMIB010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5208
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.231"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..117
                     /locus_tag="JNZ89_004091"
     CDS             <1..117
                     /locus_tag="JNZ89_004091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HAY8937777.1"
                     /translation="DWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR"
     gene            complement(167..1915)
                     /locus_tag="JNZ89_004092"
     CDS             complement(167..1915)
                     /locus_tag="JNZ89_004092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIA"
                     /protein_id="HAY8937778.1"
                     /translation="MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFT
                     LNGKARISASGSAGYQLEIFERRSFFQLLQKHDNDYRLLVLLLLNTFTPRAQLASALN
                     LPETWVAERLPRLKQRYERACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
                     GVTRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV
                     EQSGMFLGDNAVRTLTGLIEKQHQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENI
                     TGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIG
                     LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREE
                     IEPLLIINNSHYLLEDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS
                     FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWS
                     EQERRFRGFLITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEVI
                     AGLTGYEAFMELLHKG"
     gene            complement(1915..2985)
                     /locus_tag="JNZ89_004093"
     CDS             complement(1915..2985)
                     /locus_tag="JNZ89_004093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709702.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY8937779.1"
                     /translation="MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGS
                     FVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHK
                     GVKIPGVIGSVAPHALTEKQRQRPLSFDEMFIDIGANSRDEVEKRGVAMGDFISPEAN
                     FACWGEDKVVGKALDNRIGCAMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEH
                     IKPDVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAH
                     NDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDALLTLI
                     RDFLTTLTAEKVNAFSQFRQMD"
     gene            complement(2975..4426)
                     /locus_tag="JNZ89_004094"
     CDS             complement(2975..4426)
                     /locus_tag="JNZ89_004094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIBC"
                     /protein_id="HAY8937780.1"
                     /translation="MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQG
                     SSGVENRLSSEEIAAADYVILATGRGLSGDDRARFTGKKVYEIAISQALKNIDQIFSE
                     LPTNSQLFAADSGVKLGKQEMQSGSVMSHLMAGVSAALPFVIGGGILVALANMLVQFG
                     LPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLAND
                     KALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVL
                     TYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSL
                     LEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAI
                     PYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLA
                     IGLALNISFIIVLKGLWLRRKAKAAQQELVHEH"
     gene            complement(4437..4883)
                     /locus_tag="JNZ89_004095"
     CDS             complement(4437..4883)
                     /locus_tag="JNZ89_004095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIA"
                     /protein_id="HAY8937781.1"
                     /translation="MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQT
                     LLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGV
                     PQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS"
BASE COUNT         1318 a         1343 c         1316 g         1231 t
ORIGIN      
        1 gactgggata aagagcaact tcaggacgca aactcaagct ggatggtcga agactctttc
       61 ccgagagcat tacgcgagta caacgaaatg gttgatgact ataatagcct gcgttaaacg
      121 tttttgatga taaatgcagt gtcggatgcg gcgcatctga cacagttcac cccttgtgaa
      181 gtaactccat aaatgcctca tatcctgtta acccggcaat aacctctgcc ggatgctgac
      241 acaatatgct tgccagatag ctaaatattt ttagctcatg acgcgcatcg gcggcggcgc
      301 aggcgatcaa gacatggtta atgacttcgt tattcacctc aactggttgg gcgagggtaa
      361 taagaaatcc acgaaaacgt cgctcctgtt cgctccagca atgtgggatg gcgaggcgat
      421 taacaatcag gttttcacct tcgccttcgc gggcgatgat gcgttgtgct tcatcggcgg
      481 taatatggtg ttgtgcgact aattgcgcac aaatttgccg ggtaatatgt tgccagcttt
      541 caccgcgtac attcgaataa tgaaaacttc cgggggcaga gaaaaaacgc tccggttgct
      601 ggcgaataaa tgccgtcgcc agaaaatgtt ttatttgttc gataccggca gccgtaatga
      661 tattttttac ggtgatgtaa ttatttaccg cgtcttccag taaataatgg ctattgttaa
      721 tgatcaataa cggctcaatc tcttcgcgaa tggcaacaag ttcgcttaag ctacgggcaa
      781 taattacccg acaatttaaa acatcgcgct caatggcgag ctgattaata gtggcaatcg
      841 cgttctggtc cgagagcaaa atgatcggct ggcgttcgtt ttgatgccgc tccagcgcac
      901 aggcaaaata caaaccgatc agatcgctgt cgaaaagggg aatatcgagc tgttcacgca
      961 gtagcgtaat aaagtgcaga ctcatatcaa aggccgcagg ccaggctgct ttcaggttat
     1021 tcatgctact ttggcggtgc tcagcaatcc acaccggtgc ggcaaggcaa cgtaataaat
     1081 gcccggtaat attctcaacc aactgcgtat caataatatt caatgacgcg atgtctggca
     1141 ccctttgcag caaccccagc acatgatcgg ctgaaattac ctgcgcttgc tgatgctgtt
     1201 tctctatcaa acctgtcagg gttcttacag cgttatcacc aagaaacatg ccgctttgtt
     1261 caacgatttg ttttatctcg tcaccgggat attgcggcca ctcatcggtc agttgattac
     1321 gcagggcgta aatcgccaga atcaggctgg agagataatc accctgcatg agcggccagc
     1381 ggtgttggtt gtcgcaggcc gtggataaat gctgaaggtt gtctcgtgtt acgcccgcca
     1441 gcggaattaa aaacggatct ttgcgcagca agttcgccag caagataacg cgcttctctt
     1501 ctgtctcatc aatgaaatgg cccaaaccgg ggcggctggc caggcaacaa gcgcgttcat
     1561 aacgctgttt taaccggggc agacgctctg cgacccacgt ttctggcaaa ttaagcgccg
     1621 aggcgagttg cgcacgggga gtaaaggtat tcagtaataa cagtaccagc agccgatagt
     1681 cgttatcgtg cttttgcagc aactgaaaaa agctgcggcg ctcgaagatt tccagctgat
     1741 agcccgcact accactggcg gaaatgcggg ctttgccgtt aagggtaaag ttgagatagt
     1801 caatatcacg caggatggtc ctgcctgaaa cgccagtctg ttgcgccagc tcaccaggcg
     1861 tgcgcggctg ttgctccagc agatcgacaa tctttaactg gcgttcgttt agcattaatc
     1921 catctgacgg aactggctaa acgcgttgac tttctccgcg gttaaggtgg tcagaaaatc
     1981 ccgtatcaac gtgagcagag catcgtaatc ggcttttgaa atcataccgc tgttagcgtg
     2041 cagatagcgg gttggcaggc acagcgcaac aaccggacgc ccgccgccca tcacgttgta
     2101 gcgcccgcca tccgtcgcac cggttttcat ggtggaaaat tgcagcggta aatcgttatg
     2161 tgcggcacag ctttttaacg ctgctaccag tttctggttg gggaagtagc gcttgtcaaa
     2221 cagcatcagc cccggcccct ggcccagttt cagcgggtat ttaatgttat caatgcccgg
     2281 aacatcgcct gcgacagcgg tatccagcac gatcactaca tccggtttaa tgtgttccgc
     2341 cgaggtttgt gccccgcgta gcccaacttc ttcttccacg ctgccgacgc catacagcgt
     2401 aatttcggga ttattcaccg tctgcaatag ttcagccatc attgcgcagc cgatgcggtt
     2461 atccagcgcc ttgccgacca ctttatcttc gccccagcag gcaaaattgg cttccgggct
     2521 aataaaatcg cccatcgcca caccgcgttt ttccacctca tcgcgactgt ttgcgccaat
     2581 atcaatgaac atctcatcaa atgacagcgg ccgttgcctt tgcttttccg ttaacgcatg
     2641 aggcgcgacg gaaccaatca caccagggat tttcactccc ttgtgtgtgc gtatggttac
     2701 ccggtggttg agcatcgact gattccacca gccaccaatg gtggtgaaac gcagaaaacc
     2761 gctctcgtcg atgtgggtga ccataaagcc gacttcatcc atatgcccga caacggcaac
     2821 ttttggacct ttattcccct tacgggcaac aaagctgccc agaccatcaa aggtgatctc
     2881 attaacgcaa ggttccagcg tgtttatcag aatgtcgcga acttcctgtt catcgccgct
     2941 gacggcgctg gcttcgcaca actgttgcag taactcaatg ttcatggaca agctcctgtt
     3001 gcgcggcttt cgctttgcgg cgtaaccaca atcctttcag gacgataatg aatgaaatgt
     3061 tcagcgcgag gccaatcgcc agcaccagat aaaacgaacc caccggcgac atcaggccga
     3121 tcagcgggtc aaagataccc aaaccaggtg ccagacgttt gattccgaaa gcgatcacca
     3181 gcacgccggt aatgccaccc gccagcgtat tggcggtaat catcggcaac ggagctgcca
     3241 gagcgtaagg tatagccggt tcggttgcga ctgtggcacc gaccacaatg gcactactgg
     3301 cagcctcttt ttcctgtcgg gtaaacagtt tgggcgcaat gaacgtcgca agacccgccg
     3361 caacgggcgg catcaacgcg acaacgccga cgatggcgta ccagtcataa atgtgttttt
     3421 ccagcagtga gaagcagaag aaccaggcgg ttttattgat ggggccgccc atatcgaacg
     3481 ccagcatcgc accgaccaga aacgctgctg caaacttcat tgatggagga atggtattca
     3541 ggaagtggag cagcccgccc atgaggtcgg acatcaccgg cccgataacg tagtaagtga
     3601 gcacgccgaa aaccagcaga gtaacgaacg ggatcagcat tgaaccgagc agcggttgta
     3661 atgctttgcc aaggcgcact ttgcggaacc agaagacgaa atagccaatc gccagcccca
     3721 gcaccaccgc gccgaggaat cccgcacccg actgggtgcc gagcagcgct ttgtcgttcg
     3781 ccagatagca aaccagaaac gccggagcga aagccggttt atcggcaatc gacgaggcaa
     3841 tataagcgcc catgatgggg atcataaagg tgaagccaag gtaaccgatg gattcaacta
     3901 cccaggtaaa cgacggcgcg cctttcgaca tatcggtata cggcaaaccg aactgcacca
     3961 gcatgttggc aagcgccacc aggataccac cgccgatgac aaacggcagc gccgcagaga
     4021 cgcccgccat caggtggctc atcacgctgc cgctttgcat ttcctgtttg ccaagcttca
     4081 cgccactatc tgcggcaaaa agctgcgagt ttgtcggtaa ttcgctgaaa atctggtcga
     4141 tatttttcaa cgcctgggag atggcaatct cataaacttt cttcccggta aaccgcgcgc
     4201 gatcatcacc gctcaggcca cgcccggtag cgagaatgac gtaatcggca gcggcaatct
     4261 cttcgctgga taagcggttt tcaacgccac tggacccttg agtttccact tttatggtat
     4321 ggccgagaga acgggctttc tgttccaggg cttccgccac catgtaggtg tgagcgatcc
     4381 cggcggggca gttggtgatc gcgacaatac gtaaggatga ctccatcgcc acttccttat
     4441 gagctgaggg tttgatttaa caaggcaagc acttggtcgg tatcgccctg ttgcagttga
     4501 tgaataaatt ccttgtgaat aattttgcga cacagtgtgc cgatgatttt gacctgatcc
     4561 tcttcgccgc tttgcggcac gccgaggcag atccagcaat tgacgtcttc gccatcgctg
     4621 gctttccagt caatagcctg cgctttgcgg gcgaataata cgaacggttg tttaacgcag
     4681 gcgcttttac cgtgcggcac ggcgacaccg gaaccaaatc cagtagagtg cattttttcg
     4741 cgcagcagca gggtttgcag gaactggtgt gagtcggtga taaaaccgtt ttgtaacgct
     4801 attgtcgcca actgcttcag aacggaataa gcgccattgc cctgaatatt caggtcaata
     4861 cagcttgcag taagagctgc cattaatcgg actccataaa atatatttta atcaattgta
     4921 atggtggagc gattaagtga tgagaggcga tatgtcggta aacaatgaca atttgagaca
     4981 gagtgaaagg tcagatttgc ggagtaatgc acataatggt tatttaaata aaccacatga
     5041 atcattaatg ggttattcat tatttttgtg atttactcac aatgtatcag ggaaatataa
     5101 cttaccggga gatgtaatat gtttaatttt tcaaatcgaa atttaaaata ttgtgccgga
     5161 ggcatctccg gcacattggg caattacggc aggtaaaaca cttcttgc
//
LOCUS       DADMIB010000229         5030 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.232, whole genome shotgun sequence.
ACCESSION   DADMIB010000229 DADMIB010000000
VERSION     DADMIB010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5030
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.232"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            6..81
                     /locus_tag="JNZ89_004096"
     tRNA            6..81
                     /locus_tag="JNZ89_004096"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Thr,seq:ggt)
     gene            121..236
                     /gene="rrf"
                     /locus_tag="JNZ89_004097"
     rRNA            121..236
                     /gene="rrf"
                     /locus_tag="JNZ89_004097"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(468..1225)
                     /locus_tag="JNZ89_004098"
                     /pseudo
     CDS             complement(468..1225)
                     /locus_tag="JNZ89_004098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312171.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
     gene            complement(1233..2336)
                     /locus_tag="JNZ89_004099"
     CDS             complement(1233..2336)
                     /locus_tag="JNZ89_004099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HAY8937782.1"
                     /translation="MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL
                     MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINL
                     VLLIGLVSIAPMFWKILPHRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLT
                     LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML
                     PLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ
                     GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEG
                     YVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH"
     gene            complement(2346..3516)
                     /locus_tag="JNZ89_004100"
                     /pseudo
     CDS             complement(2346..3516)
                     /locus_tag="JNZ89_004100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026209.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
     gene            complement(3584..4645)
                     /locus_tag="JNZ89_004101"
     CDS             complement(3584..4645)
                     /locus_tag="JNZ89_004101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8937783.1"
                     /translation="MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDG
                     LLGFSYADADGKFSGIDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTAKERF
                     TALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKELDGAT
                     VCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQLYALR
                     IKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQNVDE
                     KAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESPLKIK
                     RGQNNLWNNGGIQYAPPVR"
BASE COUNT         1398 a         1285 c         1194 g         1153 t
ORIGIN      
        1 agcgtgctga tatggctcag ttggtagagc gcacccttgg taagggtgag gtccccagtt
       61 cgactctggg tatcagcacc actttttagg ttaaagttcg gcaaattaga aaagaatttg
      121 tctggcggca gtagcgcggt ggtcccacct gaccccatgc cgaactcaga agtgaaacgc
      181 cgtagcgccg atggtagtgt ggggtcttcc catgcgagag tagggaactg ccagacatca
      241 aataaaacaa aaggcccagt cttccgactg agccttttgt tttatctgtt gtttgtcggt
      301 gaacactctc tcgagtagga caaatccgcc gggagcggat ttgaacgttg cgaagcaacg
      361 gcccggaggg tggcgggcag gacgcccgcc ataaactgcc agacatcaaa tcaagcaaaa
      421 aggccatccg aaaggatggc ctttttgctt ttcgaactaa cattcaatta atggattacc
      481 tgcgataaaa atgccctcgt acgctctgat ttaggatgcg taaaaaattc atcaggtgca
      541 gcttgttcca ctatctcccc acgatccata aaaattaccc ggtcagcgac ggtacgtgca
      601 aaccccatct catgtgttac acacaacatt gtcatacccg actgcgccag cccaatcatc
      661 gtatccagca cctctttcac catctccgga tcgaggccga cgttggttca tcaaacaaca
      721 taattttcgg cttcatacac agcgaacgcg caatggcaac gcgttgctgc tgaccacctg
      781 aaatctgtcc gggaaactta tgcgcatgtt cggcaattct cacccgctca aggtaatgca
      841 tcgccagagc ttcagcctct ttcttaggca tcttgcgtac ccaaatcggt gccagggtac
      901 agttctgtaa aacggtcaga tgagggaaga gattgaaatg ctgaaatacc attcccactt
      961 cttgcctgac gcgctcaata ttgcggatat cttcattaag ttcgatgcca tctacgacaa
     1021 tccgtccctg ttgatgttct tccagatgat taatacaacg aatggttgtc gatttaccgg
     1081 aaccagaagg gccacacaga acgatccgtt ctcccggttg cacggttaaa tttatatttt
     1141 tcaaaacatg gaattgtcca taccatttat ggacgttttc cagcgtaatc atcgcgttag
     1201 caggttgcag taaaatttgg ctcatagtgt cctcaatgcg gtgtacgccc ggtgttaaaa
     1261 cgtttttcca gatgttggct ataacgtgac atgctgaaac aaaagatcca gtagatcagc
     1321 gcggcgaaaa catacccttc cgtcgacata cccaaccagg cgggatcaac ggttgcctgc
     1381 tgaacgctac tgaaaagatc gaacaagccg atgatgatca ccaggctggt atctttgaag
     1441 agtgcgatga tggtatttac cagcccagga attaccagct tcaacgcctg tggcagaata
     1501 accagcccct gagttttcca gtaccccaac gccagcgact ctgccgcttc atattgccct
     1561 ttaggtaggg cctgtaatcc gcctcgcacg acttccgcaa catatgctga ctgaaacagg
     1621 atcacgccaa ccagcgcgcg gatcagtttg tcgatactgg tgccttctgc cataaacaac
     1681 ggcagcatga ccgaagacat aaacaatacg gtaatcagcg gtacgccgcg ccagaactcg
     1741 ataaaaatga ccgataagat acgcacaatc ggcatatggg agcggcgacc taacgccagt
     1801 aagatccccc acggtagcgc ccccgcaatc ccaacggatg caataattaa agttagcgtc
     1861 agcccgcccc attgccgggt ttcaacccgc tcaagaccaa aaaaaccgcc atacatcagc
     1921 caccagacaa tcagtgggta aatcaccgcc cagaccgcaa tatagcgacc gcgatgcggg
     1981 agtattttcc agaacattgg tgcgattgac acaaggccaa tcagtaatac taggttaatt
     2041 cgccagcgtt ggtcgtgtgg gtaaagtcca tacataaact gaccaaatcg ttcgtggatg
     2101 aagacccaac aggcaccggc ttttgtgcag tcggcacgcg ttgagccaac ccagttagcc
     2161 tgcaaaaatg cccagttcag caacggtggg atcagttccc acatcaacca tatgcagcca
     2221 atagtcagca ggctattgct ccagctggag aacagatttt ttcgcaccca caccatcgcg
     2281 cggcttgagt tatggctcgc tgggcgcgag ggctgagaca gcaatacttt tgtcatcatg
     2341 actccttagc gttcaacgat cgcgatgcgg cggttataga tattcatcag cagcgagata
     2401 gtcaggctga taatcagata gaccgacatg gtcatggcta tcgtctcgat ggcttgcccc
     2461 gtctggttca gcacggtgcc agcaaacagc gaaaccatat cgggatagcc aatagcggcg
     2521 gcaagagagg agtttttgac gatgttgaga tactggctgg ttaacggcgg aataatcact
     2581 cgcagtgcct ggggaataat gacctggcgt agcgtaaccc cagtgaccga gccgcttcat
     2641 gttgaccata aggcactgcc tggatcccag cgcggataat ctcggcgata aatgcagagg
     2701 tataaaccga aagtgccagc gttaaggctg ccagttcagg aattaaaacc attccgccgc
     2761 ggaagttaaa gcctcgtagg gctgggacat cccagtgtag tgctgcgcca aaaagccatt
     2821 gcgccagtaa aggcaaaccg atgatcaaca ctgcggcgaa cggccaggtg cggcgcagtt
     2881 gtccggtctt tatctggtat gttttattaa agcggaatag cccaacagaa aggactatag
     2941 ccataacaac agctaggata aacgcaataa atccgtctcc cagctgcggt gacggaatat
     3001 aaagcccacg attgctcaaa aaggccagat caaacgcgct cacagcctgg cgcgtggtcc
     3061 gggcaaattg cgcaacacgg caaagtacca gaagaagatt tgcagcagcg ggggaatatt
     3121 acggaagatc tcaatataaa ttgtggatag ctttcgtagc agtcagttat ccgaaagtct
     3181 cgtcagaccg ataaagaagc ctaaaacaga agcgaacaca atacacaatg cagaaaccag
     3241 tagcgtattg agtaagccga caataaaaac gcgtccgtag gtgtcgccct gctggtaatc
     3301 gatcaaatgc tggacaatac cgaagccagc gccgcgatcc agaaaggcaa aacctgaagt
     3361 aatgccacga ttactgagat tcgttacagt gttgtgaaat aaccaaccaa caattccgac
     3421 aacagcaaca acggcaagga tctggaataa ccaggcacga accgtagggt tggcaaagga
     3481 gagtgagcct ttaacggttg agcggcgatg agacatagaa acctcggaaa gcataacgct
     3541 gaagagagcg ccgccgtagc gacgctcgtt acctcacacc gacttaacgc acgggcggcg
     3601 cgtactgaat accgccgtta ttccagagat tattttgccc acgtttaatt ttcagcgggc
     3661 tttctgaacc tacgttacgc tcgaaaattt ccgagtagtt acccacctgt ttgatgatgt
     3721 tataggccca tttattatcc aacttcagat ccttgccgta atcgccttct ttacccagca
     3781 gatgtgccat atcaggcgtt gctggattag ccgctttttc atcgacgttc tgggaattga
     3841 tgcccatctc ttcagcattc agcatggcga aaagcgtcca gcgtacaatc gagaaccatt
     3901 catcatcgcc acgacgaact accggcccaa gcggttcttt agagataacc tccggtaaga
     3961 caatccattc agctgggttg cttaatttga tgcgcagggc atacagttgc gactgatccg
     4021 aggccagcgt atcgcagcga ccagattcca gtgccttcgc tgattcgtca gagcgatcga
     4081 aagtcaccgg tgtgtacttc atattgtttg ccttgaaata gtcggcaacg ttgagttcgg
     4141 tatcagtacc cgcctgaata cagacggtag cgccatccag ttctttcgcg ctttttagcc
     4201 ccgctttatc gtgcgtcagg aagccaatgc cgtcgtaata agtgacgcca gtaaatgcca
     4261 ttcccatccc ggcgtcgcga gatgaagtcc aggtcgtatt acgggagagc aaatccactt
     4321 cccctgactg taaagccgtg aagcgttctt ttgctgtgag tggggtatat ttcactttcg
     4381 tgtcgtcacc aaatacagca gcggcaacac tacgacaaac atcaacatca acatcaacat
     4441 caacatcaac atcaacatca acatcaatac ctgaaaactt accgtctgca tcggcataag
     4501 agaacccaag taatccatca ctgatcccgc attgcacaaa accttttttc tgaacggcat
     4561 caagcgtcgc gccagcatgc gcctgatttg caacggcaag cagcacgctg gcggcagcca
     4621 gtgtggctat catcatcttt ttcataatgc ttcctgtgag gcgaaaatta tcgttatagg
     4681 acgtttggga aacgtctttt acctgtctgt ggccatcctc ttataagcaa aagtagtgcc
     4741 agcttttgcg cacgatttcg cgtcgcaata agctgagtgt agacaggaaa taataaaaac
     4801 agcgccccgc aatggtgcga aaatgaaaca tgcgccacat tttggcgcaa aatatttacg
     4861 cgtgttttac taagcagaat aatgattgtt agcgtgagta tatttctggt gggaagtgtg
     4921 aaagttaaat tgatgcgtta tttcgaaagc agcgaaataa cgcgatataa catgctaaat
     4981 cagcagagaa ttagccagca gaatatagca atattttatc ttatgtaaag
//
LOCUS       DADMIB010000230         4960 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.233, whole genome shotgun sequence.
ACCESSION   DADMIB010000230 DADMIB010000000
VERSION     DADMIB010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4960
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.233"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..247)
                     /locus_tag="JNZ89_004102"
     CDS             complement(<1..247)
                     /locus_tag="JNZ89_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3029 family protein"
                     /protein_id="HAY8937784.1"
                     /translation="MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQL
                     PAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLAN"
     gene            505..1284
                     /gene="deoC"
                     /locus_tag="JNZ89_004103"
     CDS             505..1284
                     /gene="deoC"
                     /locus_tag="JNZ89_004103"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005097947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HAY8937785.1"
                     /translation="MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQTKTPVGNTA
                     AICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVD
                     VVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIK
                     AGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI
                     ADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY"
     gene            1411..2733
                     /gene="deoA"
                     /locus_tag="JNZ89_004104"
     CDS             1411..2733
                     /gene="deoA"
                     /locus_tag="JNZ89_004104"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313368.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HAY8937786.1"
                     /translation="MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAM
                     TIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMV
                     AACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSL
                     APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
                     ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVT
                     MALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYL
                     PTAMLTKAVYADTEGFVSEMDARALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQ
                     VDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE"
     gene            2785..4008
                     /gene="deoB"
                     /locus_tag="JNZ89_004105"
     CDS             2785..4008
                     /gene="deoB"
                     /locus_tag="JNZ89_004105"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HAY8937787.1"
                     /translation="MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEAD
                     NGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGH
                     WEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEH
                     MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIG
                     DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKAT
                     GLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMS
                     LLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLA
                     KYFGTSDMEYGKAMF"
     gene            4088..4807
                     /gene="deoD"
                     /locus_tag="JNZ89_004106"
     CDS             4088..4807
                     /gene="deoD"
                     /locus_tag="JNZ89_004106"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HAY8937788.1"
                     /translation="MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVR
                     GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLR
                     DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLF
                     YSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
                     QTTFNDMIKIALESVLLGDKE"
BASE COUNT         1192 a         1265 c         1364 g         1139 t
ORIGIN      
        1 cgttcgccag aaaacgggcg taatcgggta agacatagcg cggtttgtac ggcgcatgac
       61 cttcaaacat atcgcagatt acaccctcat ccagcgcgcg gcgggcttcg gcaggaagct
      121 gcggataagg cagattgttt tctgcttcca gagccagaaa atggcgcttc tgctccgggc
      181 taagcactgg gctggtgaca atttgctggc aacgttgttg cagtgcattt tcatgagaag
      241 tgggcatctt cttttccttt tatgccgaag gtgatgcgcc attgtaagaa gtttcgtgat
      301 gttcactttg atcctgatgc gtttgccacc actgacgcat tcatttgaaa gtgaattatt
      361 tgaaccagat cgcattacag tgatgcaaac ttgtaagtag atttccttaa ttgtgatgta
      421 tatcgaagtg tgttgcggag tagatgttag aatactaaca aactcgcaag gtgaatttta
      481 ttggcgacaa gccaggagaa tgacatgact gatctgaaag caagcagcct gcgtgcactg
      541 aaattgatgg acctgaccac cctgaatgac gacgacaccg acgagaaagt aattgctctg
      601 tgtcatcaga ccaaaactcc ggtcggcaat accgccgcta tctgtatcta tcctcgcttt
      661 atcccgattg ctcgcaaaac gctgaaagag cagggcaccc cggaaatccg aatcgctacg
      721 gtaaccaact tcccacacgg taacgatgac atcgaaatcg cgctggcaga aacccgtgcg
      781 gcaatcgcct acggtgctga tgaagttgac gttgtgttcc cgtaccgcgc gctgatggcg
      841 ggtaacgagc aggttggttt tgacctggtg aaagcctgta aagaggcttg cgcggcagcg
      901 aatgtactgc tgaaagtgat catcgaaacc ggcgaactga aagacgaagc gctgatccgt
      961 aaagcgtctg aaatctccat caaagcgggt gctgacttca tcaaaacctc taccggtaaa
     1021 gtggcagtga acgcgacgcc ggaaagcgcg cgcatcatga tggaagtgat ccgtgatatg
     1081 ggcgtagaaa aaaccgttgg tttcaaaccg gcgggcggcg tgcgtactgc ggaagatgcg
     1141 cagaaatatc tcgccatcgc agatgaactg ttcggtgctg actgggcaga tgcgcgtcac
     1201 taccgctttg gtgcttccag cctgctggca agcctgttga aagcgctggg ccacggtgac
     1261 ggtaagagcg ccagcagcta ctaagcaaga tgctttacgc ctgatgcgct gcgcttatca
     1321 ggcctacgag acgtatctac ccgtaggccg gataaggcgt agacgcatcc ggcaaaagcc
     1381 gcctcatact cttttcctcg ggaggttacc ttgtttctcg cacaagaaat tattcgtaaa
     1441 aaacgtgatg gtcatgcgct gagcgatgaa gaaattcgtt tctttatcaa cggcattcgc
     1501 gacaacacta tctccgaagg gcagattgcc gccctcgcga tgaccatttt cttccacgat
     1561 atgacaatgc ctgagcgtgt ctcgctgacc atggcgatgc gagattcagg aaccgttctc
     1621 gactggaaaa gcctgcatct gaatggcccg attgttgata aacattccac cggcggcgtc
     1681 ggcgatgtca cttcgctgat gttggggccg atggtcgcag cctgcggcgg ctatattccg
     1741 atgatctccg gtcgcggcct cggtcatact ggcggtacgc tcgacaaact ggaatccatc
     1801 cctggcttcg acattttccc ggatgacaac cgtttccgcg aaattattaa agacgtcggc
     1861 gtggcgatta tcggtcagac cagctcactg gctccggcgg ataaacgttt ctacgcgacc
     1921 cgtgatatta ccgcaaccgt ggactccatc ccgctgatca ctgcctcgat cctggcgaag
     1981 aaactggcgg aaggtctgga tgcgctggtg atggacgtga aagtgggtag cggcgcgttt
     2041 atgccgacct acgaactctc tgaagccctt gccgaagcga ttgttggcgt ggctaacggc
     2101 gctggcgtgc gcaccaccgc gctgctcacc gacatgaatc aggtactggc ctccagtgca
     2161 ggtaacgcgg ttgaagttcg tgaagcggtg cagttcctga cgggtgaata tcgtaacccg
     2221 cgtctgtttg atgtcacgat ggcgctgtgc gtggagatgc tgatctccgg caaactggcg
     2281 aaagatgacg ccgaagcgcg cgcgaaattg caggcggtgc tggacaacgg taaagcggca
     2341 gaagtctttg gtcgtatggt agcggcacaa aaaggcccga ccgacttcgt tgagaactac
     2401 gcgaagtatc tgccgacagc gatgctgacg aaagcagtct atgctgatac cgaaggtttt
     2461 gtcagtgaaa tggatgcccg cgcgctgggg atggcagtgg ttgcaatggg cggcggtcgt
     2521 cgtcaggcat ctgacaccat cgattacagc gtcggcttta ctgatatggc gcgtctgggc
     2581 gaccaagtag acggtcagcg tccgctggcg gttatccacg cgaaagacga aaacagctgg
     2641 caggaagcgg cgaaagcggt gaaagcggca attaaacttg ccgataaagc accggaaagc
     2701 acaccaactg tctatcgccg tatcagcgaa taacggtata ctgatctgat catttaaatt
     2761 tgaagcactg agtacggaga acatatgaaa cgtgcattta ttatggtgct ggactcattc
     2821 ggcatcggcg ctacagaaga tgcagaacgc tttggtgacg tcggggctga caccctgggt
     2881 catatcgcag aagcttgtgc caaaggcgaa gctgataacg gtcgtaaagg cccgctcaat
     2941 ctgccaaatc tgacccgtct ggggctggcg aaagcacacg aaggttctac cggtttcatt
     3001 ccggcgggaa tggacggcaa cgctgaagtt atcggcgcgt acgcatgggc gcacgaaatg
     3061 tcatccggta aagatacccc gtctggtcac tgggaaatcg ccggtgtccc ggttctgttt
     3121 gagtggggat acttctccga tcacgaaaac agcttcccgc aagagctgct ggataaactg
     3181 gtcgaacgcg ctaatctgcc gggttacctc ggtaactgcc actcttccgg tacggtcatt
     3241 ctggatcagc tgggcgaaga gcacatgaaa accggcaagc cgattttcta tacctccgct
     3301 gactccgtgt tccagattgc ctgccacgaa gaaacctttg gcctggataa actctacgaa
     3361 ctgtgcgaaa tcgcccgtga agagctgacc aacggcggct acaacatcgg tcgtgttatc
     3421 gctcgtccgt ttatcggtga caaagccggt aacttccagc gtaccggtaa ccgtcacgac
     3481 ctggctgttg agccgccagc accgaccgtg ctgcagaaac tggttgatga aaaacacggt
     3541 caggtggttt ctgtcggtaa aattgcagac atctacgcca actgcggtat caccaagaaa
     3601 gtgaaagcaa ctggcctgga cgcgctgttt gacgccacca tcaaagagat gaaagaagcg
     3661 ggtgataaca ccatcgtctt caccaacttc gttgacttcg actcttcctg gggccaccgt
     3721 cgcgacgtcg ccggttatgc tgcgggtctg gagctgttcg accgccgtct gccggagctg
     3781 atgtctttgc tgcgcgatga cgacatcctg atcctcactg ctgaccacgg ttgtgatccg
     3841 acctggaccg gtactgacca cacgcgtgaa cacattccgg tactggttta cggcccgaaa
     3901 gtaaaaccgg gttcactggg tcaccgtgaa accttcgcgg atatcggcca gactctggca
     3961 aaatattttg gtacttctga tatggaatat ggcaaagcca tgttctgata atgggtgcgg
     4021 cttgatgccc tcaccccggc cctctcccac agggagaggg tgaaaacatg ttgataagga
     4081 taaaacaatg gctaccccac acattaatgc agaaatgggc gatttcgctg acgtagtttt
     4141 gatgccaggc gacccgctgc gtgcgaagta tattgctgaa actttccttg aagatgcccg
     4201 tgaagtgaac aacgttcgcg gtatgctggg cttcaccggt acttacaaag gccgcaaaat
     4261 ttccgtaatg ggtcacggta tgggtatccc gtcctgctcc atctacacca aagaactgat
     4321 caccgatttc ggcgtgaaga aaattatccg cgtgggttcc tgtggcgcag ttctgccgca
     4381 cgtaaaactg cgcgacgtcg ttatcggtat gggtgcctgc accgattcca aagttaaccg
     4441 catccgtttt aaagatcatg actttgccgc tatcgctgac tttgacatgg tgcgtaacgc
     4501 ggtagacgcg gctaaagcac tgggcattga tgctcgcgtt ggtaacctgt tctccgctga
     4561 cctgttctac tctccggacg gcgaaatgtt cgacgtgatg gaaaaatacg gcatcctcgg
     4621 cgtggaaatg gaagcggctg gtatctacgg cgtcgctgca gaatttggcg cgaaagccct
     4681 gaccatctgt accgtgtctg accacatccg cactcacgag cagaccactg ccgctgagcg
     4741 ccagaccacc ttcaacgaca tgatcaaaat cgcactggaa tccgttctgc tgggcgataa
     4801 agagtaattg tgtttcgctg aaaggcgatt gtcgtgtgaa gccggagtgg gagactgctc
     4861 cggcttttta gtatctattc atcaatagca actgatttat agatttacta ttatttttca
     4921 tatggataga aaataaaatc tattcaagta tctattcacg
//
LOCUS       DADMIB010000231         4871 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.234, whole genome shotgun sequence.
ACCESSION   DADMIB010000231 DADMIB010000000
VERSION     DADMIB010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4871
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.234"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            298..1272
                     /gene="hemB"
                     /locus_tag="JNZ89_004107"
     CDS             298..1272
                     /gene="hemB"
                     /locus_tag="JNZ89_004107"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HAY8937789.1"
                     /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY
                     KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM
                     SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGAD
                     FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS
                     YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY
                     AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR"
     gene            complement(1378..2229)
                     /gene="tauD"
                     /locus_tag="JNZ89_004108"
     CDS             complement(1378..2229)
                     /gene="tauD"
                     /locus_tag="JNZ89_004108"
                     /EC_number="1.14.11.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine dioxygenase"
                     /protein_id="HAY8937790.1"
                     /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV
                     VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV
                     TFIETPPAGAILAAKELPSTGGDTLWTSGITAYEALSVPFRQLLSGLRAEHDFRKSFP
                     EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES
                     EALLGFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRVTILGD
                     KPFYRAG"
     gene            complement(2244..3053)
                     /gene="tauC"
                     /locus_tag="JNZ89_004109"
     CDS             complement(2244..3053)
                     /gene="tauC"
                     /locus_tag="JNZ89_004109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter permease TauC"
                     /protein_id="HAY8937791.1"
                     /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAAL
                     QLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVG
                     IAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS
                     ALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE
                     LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTP"
     gene            complement(3050..3817)
                     /gene="tauB"
                     /locus_tag="JNZ89_004110"
     CDS             complement(3050..3817)
                     /gene="tauB"
                     /locus_tag="JNZ89_004110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter ATP-binding subunit"
                     /protein_id="HAY8937792.1"
                     /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL
                     NLIAGFVPYQHGSIQLAGKHIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK
                     MQRLEIAHQVLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD
                     AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLPLNFA
                     RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS"
     gene            complement(3830..4792)
                     /gene="tauA"
                     /locus_tag="JNZ89_004111"
     CDS             complement(3830..4792)
                     /gene="tauA"
                     /locus_tag="JNZ89_004111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8937793.1"
                     /translation="MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQAGNT
                     FAKESGASVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKL
                     GNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKLGQVEIVNLQPPA
                     IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHP
                     EVVKAFAKSAIDAQQPYIANPDAWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQ
                     QQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ"
BASE COUNT         1144 a         1406 c         1231 g         1090 t
ORIGIN      
        1 acgcgttata aatatcaaaa acacaaacca gataaatatc ttatcaatat acaacaaagt
       61 ttgaattatt caatttatag cagcacaacc aaacgcaaaa aaaaataata accaagagct
      121 ataaataaag attaaaaata ttttcagtga atatgaactt attgctattt ctattacaaa
      181 gatgtcctgg tctctctttc attctcttct tgtcaacatc acgacaactt tcgtaaaaca
      241 ctcctgcccc gcttcaggta tactgtgcac cttaattcca caaacatcag gcagaccatg
      301 acagacttaa tccaacgccc tcgtcgcctg cgcaaatctc ctgcgctgcg cgctatgttt
      361 gaagagacaa cacttagcct taacgacctg gtgttgccga tctttgttga agaagaaatt
      421 gacgactaca aagccgttga agccatgcca ggcgtgatgc gcattccaga gaaacatctg
      481 gcacgcgaaa ttgaacgcat cgccaacgcc ggtattcgtt ccgtgatgac tttcggcatc
      541 tctcaccata ccgatgaaac cggcagcgac gcctggcggg aagatggact ggtggcgcgt
      601 atgtcgcgca tctgcaagca gactgtgcca gaaatgatcg tcatgtcaga cacttgtttc
      661 tgtgaataca cttctcacgg tcactgcggt gtgctgtgcg agcatggcgt cgacaacgac
      721 gcgactctgg aaaatttagg caagcaagcc gtggttgcag ctgctgcagg cgcagacttc
      781 atcgcccctt ccgccgcgat ggacggccag gtacaggcga ttcgtcaggc gctggacgct
      841 gcaggcttta aagatacggc gattatgtcg tattcgacca agttcgcctc ttccttttat
      901 ggcccgttcc gtgaagctgc cggaagcgca ttaaaaggcg accgcaaaag ctatcagatg
      961 aaccctatga accgtcgcga ggcgattcgt gagtcactgc tggatgaagc ccagggcgca
     1021 gactgcctga tggttaaacc tgctggagcg tacctcgaca tcgtgcgtga gctgcgtgaa
     1081 cgtactgaat tgccgattgg cgcgtatcag gtgagcggtg agtacgcgat gattaagttc
     1141 gccgcgctgg cgggtgctat agatgaagag aaagtcgtgc tcgaaagctt aggttcaatt
     1201 aagcgtgcgg gtgcggatct gattttcagc tactttgcgc tggatttggc tgagaagaag
     1261 attctgcgtt aatttttttc ctctcagaaa gggggagtta acctgttgaa agtacggtga
     1321 acgccccctc accctaaccc tctccccaag ggggcgaggg aaccgtccgc actcgtatca
     1381 ccccgcccga taaaacggtt tatccccaag aatcgtcacc cgatgcataa tccgccgctg
     1441 tggcaggtaa tcggcattgg catagtgctg agtcacgcgg ttatcccaaa tcgcaatatc
     1501 attcggttgc cagcgccaac gcacctgaaa ctccggttta gtgatatggg cgaataaaaa
     1561 gcctaacaag gcttcgctct ctttctcgct gacatcgaca attcgcgtag taaagccttc
     1621 attcacaaac agcgcctgtt taccgctcac cggatgcgtt cgcaccaccg gatgtagcaa
     1681 cggaggattt ttcgcgaccg cctcgcgcca gcgttgatgt tcctcctcgg ttttgcggta
     1741 tttgtattcc gggaacgatt tacggaaatc atgctccgca cgcagcccgc tcagcagctg
     1801 gcggaaggga acagagagcg cctcataggc cgtaataccg ctggtccaga gcgtatcacc
     1861 gccggtcgaa ggtaattctt tagctgccag aatcgcccct gcgggtggcg tttcaataaa
     1921 tgtcacatcg gtatgccagt tgtcgttatc tggcggatta tcgttatggg tatccagcac
     1981 gatgatctcg tcaacccctt cggcatgagg gtaaacaggg tgaatatgca gttcgccaaa
     2041 acgctgggcc agcgcgcgtt gctgctgcgg cgtaatggct tgatcgcgca gaaacaccac
     2101 ctgatggcgc agcaccgcat ggtaaagctg ttcaaactga ttatcgctta acgggcgcgt
     2161 caggtcggca cccgaaattt gtgcgccgat atacggcccc agcggggtaa tgctcagacg
     2221 ttcactcatt gtacttctcc atgctagggc gtcagacggc gctgtaacgc gcgcaaaccc
     2281 agttctaaaa gaaaggcgat aatcgcaatc accgcgattc ccgccagcac cacgtcagtc
     2341 gcgagaaatt cacccgctga ctgaaccata aatcctaaac cgcgcgtcgc ggcaatcagc
     2401 tccgccgcta ccagcgtaga ccagcccaca cccagaccaa tgcgtaatcc ggtgaggatt
     2461 tccggcagcg cgccgggcaa aatgacaaac cacagcacct gcgcacggct ggcacccagc
     2521 gactgggcgg cacgaatgcg aacctgctgc gcgcttttca cccccgccag cgccgacatc
     2581 gccaccggtg caaaaatcgc taaatagatc agtaagatct tcgaggtttc accaatacca
     2641 aaccagatca ccatcagcgg caaataagcc agcggcgaca ccggacgata aagttcgatt
     2701 accggatcca gaatgccgcg caccgtcggg cttagcccca tggcgatccc gaccggaata
     2761 ccgatcacca ccgccgcgag tagcgccagc acaatgcgcg tcaggctggc tgccagatgc
     2821 tgccacagcg tggcgtccat aaatccctgc ggtccggcaa tggtgagcag ttttgccagt
     2881 acttgttgcg gcggcggcaa aaacagcggg ctaatcagtt gcagcgccgc caccgtccac
     2941 catacagtga gtaaaaccgc taacgtgcca atgcttaagg tcacctgacg cgagagcggc
     3001 cagcgccatt tcagccgccg cgaatgcagt ttttcattaa tgagcacact catgagaacg
     3061 cctcccgttg ctcaaatacg cggcttaaaa catattcgcg catggcgatg aattgtggat
     3121 cggacttgat gctgcggctc gactctcccg caacaaagcg gcgagcaaag ttgagcggca
     3181 gccgctccag cacacggcca gggccggatg aaagcagaac cagttcagtc gccataaaca
     3241 ccgcttcttc tatatcgtgg gtaatcaaca gcacctgctt gcccgtctcc tgccagagtt
     3301 tcagcagcag agtttgcatc tggtcgcggg tgaaggcgtc cagcgcacca aacggttcgt
     3361 cgagtaataa cagctgggga ttcgccgcca gcgcgcgggc aatccccacc cgctgacgtt
     3421 gaccaccgga aagctgccag atatagcgtt tttctgcgcc ttccagcccc acttttttca
     3481 gcacctggtg cgcgatttcc agtcgctgca ttttctctat acctgccaat tgcaggccga
     3541 acgccacgtt gtcctgtaca ttgcgccacg gtagcagccc ttcattctga aaaaccaccc
     3601 cgcgctctgc tcccggtccc tcaatatgct tacccgccag ttgaatgctg ccatgctgat
     3661 aaggcacaaa accggcaatc agattcagca acgtggtttt accgcagccg gacggcccca
     3721 gcaccaccag tagctcgccg ctttccagcg tcaggttgat atcttccagt gccggtttgc
     3781 cgccataatc ggcatagaga tgagagattt gcagcatctg cgcctccttt tattgcacga
     3841 agcgcgaggt aacgtactgg ctgtaatcat tcgctacagc cgggaccttg ccctgctctt
     3901 tcaaaaactg cgcggtgtcg atgattactt tgttcaccgg tccggtcagt tctgccgttt
     3961 gttgctgcgg cgtcagatag gtattcccct taaccagccc cggaacgtca ccttccggca
     4021 cgccgcttaa acgcgccagt ttgctgatgt tttccggctg tttcagccac gcgtctgggt
     4081 tagcaatgta cggttgctga gcatcgatgg cgcttttagc gaacgctttc acgacctcag
     4141 gatgtttctc ggcaaaatct ttgcgcacca cccagacgtc cagcgttggc gcaccccact
     4201 gcccgacctg ttcagaatcg gtcaacacct tgccgtcttt ttccagggcg ttaaccgccg
     4261 gtgcccagac ataagcacca tcaatatcac cccgctgcca tgcggcgata atcgcgggcg
     4321 gctgcaggtt cacaatctcc acttgcccta gtttaatccc ccagtgtttc agcgccgcca
     4381 gcaggctgta gtgggtggtg gagataaacg gtacggcaat gcgtttgcca atcaaatctt
     4441 cgggtttgct gatagttttc tttaccacca gcgcttcgga gttacccagt tttgacgcca
     4501 gcaagaagac ttcaatcggc acctgttggc tggctgcaac cgctaatggg ctggaaccga
     4561 ggttgccgat ttgcacgtcg ccagaagcca gcgcccgcac gatgctggct ccgctgtcaa
     4621 acttacgcca gtccacgctc gccccgctct ctttagcaaa ggtgttgccg gcctgagcca
     4681 ctttcgccgg ttcggctgag gtttgatacg ccacggtgac gttcaccgcc tgtgcctgaa
     4741 aagcgatgaa tgccagtgcg gcaagaagtg tgttacgcga tgaaattgcc atgattgtct
     4801 gctccccagt cttgttatgg gagcagtatt caggaataaa aacattcatt aaaagaatta
     4861 gtcgttatcg c
//
LOCUS       DADMIB010000232         4854 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.235, whole genome shotgun sequence.
ACCESSION   DADMIB010000232 DADMIB010000000
VERSION     DADMIB010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4854
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.235"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            38..459
                     /locus_tag="JNZ89_004112"
                     /pseudo
     CDS             38..459
                     /locus_tag="JNZ89_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001317140.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(499..1713)
                     /gene="ydcO"
                     /locus_tag="JNZ89_004113"
     CDS             complement(499..1713)
                     /gene="ydcO"
                     /locus_tag="JNZ89_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BenE family transporter YdcO"
                     /protein_id="HAY8937794.1"
                     /translation="MLRCLYAITYEVTMRLFSIPPPTLLAGFLAVLIGYASSAAIIWQ
                     AAIVARATTAQISGWMTALGLAMGVSTLTLTLWYRVPVLTAWSTPGAALLVTGLQGLT
                     LNEAIGVFIVTNALIVLCGITGLFARLMRIIPHSLAAAMLAEILLRFGLQAFASLDGQ
                     FTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVIVIAQGDVVTTDVVFKPVLPTYITPD
                     FSFAHSLSVALPLFLVTVASQNAPGIAAMKAAGYSAPVSPLIVFTGLLALVFSPFGVY
                     SVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLLAGLFGSAITEMMAALPVSWIQ
                     MLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGLTLVGIGSAFWGLIAGGVCY
                     VVLNLIADRNQY"
     gene            1766..2302
                     /locus_tag="JNZ89_004114"
     CDS             1766..2302
                     /locus_tag="JNZ89_004114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8937795.1"
                     /translation="MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNE
                     SSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHF
                     SIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR
                     NGGEQTVHFHSLIHYPRS"
     gene            2375..4336
                     /gene="rlhA"
                     /locus_tag="JNZ89_004115"
     CDS             2375..4336
                     /gene="rlhA"
                     /locus_tag="JNZ89_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA 5-hydroxycytidine C2501 synthase"
                     /protein_id="HAY8937796.1"
                     /translation="MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA
                     SNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMG
                     ILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATI
                     EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLS
                     MKDNDQTANLGALIDAGVRSFKIEGRYKDMNYVKNITAHYRQMLDAIIEERGDLARAS
                     SGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVAKDHLDV
                     AVTEPLANGDGLNVMIKREVIGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNR
                     NLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNA
                     EKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASY
                     QRGSRKPVAEPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPV
                     MITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKN
                     HILKMPLPGSVVASVSPDELLKTLPKRKG"
     gene            complement(4428..4658)
                     /locus_tag="JNZ89_004116"
     CDS             complement(4428..4658)
                     /locus_tag="JNZ89_004116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncJ family protein"
                     /protein_id="HAY8937797.1"
                     /translation="MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEAD
                     SDELRAVAEESAEGLREHFYWQKSRKPEAGQR"
BASE COUNT         1262 a         1244 c         1229 g         1119 t
ORIGIN      
        1 tcacaaagtc acaacggccg tcagcaaaaa ccacgcaatg atagtcattg aggatttgaa
       61 ggtcagcaac atgtcaaagt cagcaggggt acggtcagcc agccggggcg caatgtccgg
      121 gcaaaatcag gtttaaaccg ttcgatactg gatcagggct ggtatgaaat gcaccgccag
      181 cttgagtaca agcagctctg gcgtggcggt caggtgcttg ctgttccgcc agcgtataca
      241 agccagcgtt gcgcgtactg tggtcataca gcgaaagaga accgcctgtc acaaagtaaa
      301 ttcagatgcc aggtatgtgg atatacagcg aacgccgatg taaatggcgc tcgtaacatt
      361 ttagcggcgg ggcacgccgt tcttgcctgt ggagagatgg tgcagtcagg ccgcccgttg
      421 aagcaggaac ccaccgaaat gattcaggcg acagcctgaa cgtagcaggg atccacgtct
      481 ttcagggcgt gtaggatgtc aatattggtt tctgtcagcg attaaattca acaccacgta
      541 acaaacgcct ccggcaatta atccccagaa cgcagaacca atcccgacca gcgtcaatcc
      601 acttgccgtt accagaaatg ccaccaccgc cgcgtcgcgc tcacgctcat tatgcagcgc
      661 ctgatacaaa ctgccgccaa tggtactcaa cagcgccaga cctgccagca tctggatcca
      721 acttacgggc agggcagcca tcatctcggt aatggcacta ccaaacagac ctgcgagcaa
      781 atagaaaatg cctgcaacgg cagctgccag ccaacgttga tctttatccg gatgcgcttc
      841 cgggctttgg caaatagccg cggtgattgc cgcaataccg acggaataaa cgccgaaagg
      901 ggaaaaaacc agtgccagca atccagtaaa tacaattaat ggcgaaacag gagccgaata
      961 tccagctgct ttcattgctg cgatacccgg tgcgttttgc gatgccaccg tcaccagaaa
     1021 aagggggagt gcaacgctca ggctgtgagc aaacgaaaaa tcaggggtaa tataagtggg
     1081 gagaacgggt ttaaagacaa catcagttgt gacaacgtca ccttgcgcga tgacgatcac
     1141 gatcccaata atcatcgcgg caattaccgc atagcgcggc gcaacggcct tggttgccag
     1201 ccataccagc aacatacttc cacacaacgt aaattgaccg tccagactgg caaacgcctg
     1261 taaaccaaag cgtaataaaa tctcggcaag cattgccgcc gcaagcgagt gcggaataat
     1321 gcgcatcaga cgagcaaaga gtcccgttat gccgcagagg actattaacg cgttggtgac
     1381 aataaaaacg ccgatggctt cgttaagtgt tagtccctgc aatccggtga ccaacaaagc
     1441 cgcgccaggc gttgaccatg cggtgagaac aggtacgcga taccataatg tcagagtcag
     1501 cgtactgacg cccattgcca gccccagcgc cgtcatccag ccagagattt gtgcagtggt
     1561 ggctctggcg acaatcgctg cttgccagat tattgccgct gaactggcgt agccaattaa
     1621 taccgccaga aaccccgcca gtagcgtggg tggaggaata gaaaacagac gcatagtcac
     1681 ctcgtacgtt atagcgtaca ggcaccgtag catttgtccg ttataacgca caagtgataa
     1741 acttccgttt tgccggagga gtcgcatgga aaatctcgct cgctttttat ccaccacact
     1801 taaacaacta cgccagcagc gcggctggag tctttcgcga ctggcagaag cgacgggcgt
     1861 ttctaaagca atgttagggc agattgagcg taatgagtcc agtccgacgg tcgcgacatt
     1921 atggaaaatt gccaccgggt tgaacgtacc attttcaaca tttatttctc cgccgcagtc
     1981 cgctacgcct tcagtttatg atccacaaca gcaggcgatg gtgatcactt cgctgtttcc
     2041 ttatgatcca caactctgct ttgaacactt ctcgattcag atggcatctg gtgcaataag
     2101 cgaatcgacg ccccatgaga agggggtaat cgaacatgtc gtcgtcattg atggacaact
     2161 tgatctgtgc gttgatgggg aatggcagac ccttaattgt ggggaaggcg ttcgatttgc
     2221 tgcagacgtc acgcatatct atcgtaatgg tggggagcaa accgtacatt ttcattccct
     2281 catccattac ccgcgcagtt aagcgggaaa actatttcgc aacgtcgcgc ttgtggctaa
     2341 aatagccgcc atttttcagc tactggataa gaatgtgacc gtatcttctc atcgacttga
     2401 actgttaagc ccggcacgcg atgccgccat tgcccgcgaa gctattttgc acggtgccga
     2461 tgctgtttat atcggcggcc ctggttttgg tgcccgtcat aatgccagta atagcctgaa
     2521 agatattgcc gagctggtgc cgtttgccca tcgttatggt gcaaaaattt tcgtcacgct
     2581 taacaccatt ttgcatgatg atgagctgga acccgcgcaa cggctgatta ctgacctcta
     2641 ccagaccggt gtcgatgcgc tgattgttca ggatatgggg attctggaac ttgatattcc
     2701 gccgattgaa ctgcacgcca gtacgcagtg cgacattcgt acagttgaaa aagcgaagtt
     2761 cctctctgat gttggcttca cgcagattgt gctggcgcga gagctgaatc ttgatcagat
     2821 ccgcgcgatt caccaggcta cggacgcgac cattgaattc tttattcatg gggcactgtg
     2881 cgtggcctat tcgggtcagt gctacatttc tcatgcgcaa acagggcgta gcgccaaccg
     2941 tggcgattgc tcgcaggcgt gccgtttgcc atacacattg aaagacgatc aggggcgggt
     3001 ggtttcctat gaaaaacatc tgctgtcgat gaaagataac gatcagactg ccaacctcgg
     3061 cgcgctgatt gatgctggtg tacgctcctt caagattgaa gggcgttaca aagatatgaa
     3121 ctacgtgaag aatatcaccg cccattatcg ccagatgctt gatgccatta ttgaagaacg
     3181 tggcgatctg gcgcgcgctt catcaggtcg tactgaacat ttctttgttc catcgacgga
     3241 aaagactttc caccgtggta gcacagatta ttttgtgaat gcccgtaaag gcgatattgg
     3301 cgcgttcgat tcgccgaaat ttatcggcct gccggtgggt gaagtattga aagtggcgaa
     3361 agatcatctc gatgttgccg tcaccgagcc actggcaaat ggtgatggcc tgaacgtgat
     3421 gattaaacgt gaagtcatcg gttttcgtgc caatacggtc gagaaaaccg gagaaaatca
     3481 gtaccgcgtc tggcccaatg aaatgccagc agatttgcac aaaattcgtc cacatcaccc
     3541 actaaaccgt aatcttgatc ataactggca gcaggcactg acaaaaacct ccagcgaacg
     3601 tcgggtggcg gtagacattg aactgggcgg ctggcaggaa caactgattc tgaccctcac
     3661 cagtgaagag ggtgtcagca tcacgcatac gctggacggg cagttcgacg aagccaataa
     3721 cgccgaaaaa gcaatgaaca atctgaagga tggtctggca aaactggggc aaaccctcta
     3781 ttacgcccgc gatgtgcaaa ttaatttgcc gggggcgctg tttgtaccaa acagtctgtt
     3841 aaaccagttc cgccgtgaag ctgctgacat gctggatgct gcgcgtcttg ccagttacca
     3901 gcgcggcagc cgtaaaccgg ttgctgagcc tgcgccggtt tatccgcaaa cgcatctgag
     3961 tttcctcgcg aacgtataca accagaaagc gcgtgaattt tatcatcgct atggtgtgca
     4021 gctgattgac gcggcgtatg aggcacatga agagaagggc gaagtcccgg tgatgatcac
     4081 caagcattgt ctgcgctttg cctttaatct gtgcccgaaa caggcgaaag gcaatatcaa
     4141 aagctggaag gcgacgccaa tgcaactggt taacggcgat gaagtattaa cgctaaagtt
     4201 tgattgccgc ccatgcgaga tgcacgtcat tggcaaaatc aaaaatcaca tactgaaaat
     4261 gccgttaccg ggaagcgtag tggcatccgt aagtccggat gagctgctga aaacattgcc
     4321 taagcgaaaa gggtaaaacg ccagttttct ggttactcac aactcattga atctgcatga
     4381 tattgcctgc cgggtaaggc gtcacgccgc atccggcatc aaacgactca acgttgtccc
     4441 gcttctggtt tgcgcgattt ttgccagtaa aaatgctcgc gcaaaccttc cgccgactct
     4501 tccgccacag cacgcaattc atcgctgtcc gcttcatgac gcagctgatg atccacattc
     4561 tttacccaca caaattcatg tcctttgtgc cctgccatga gttgtcctga gaacagcgca
     4621 cacgttaata agacaaccga taacgccttc gtaaacatcc tgccaccttt ttcttacctt
     4681 ttgccgctat gatgccgatc gtttcttgag gttattattc agttttgcaa attagcgcaa
     4741 agaaattctg gaatcttcct tcctgatttt gcattgcatt ctgtcgttgc ggcgatttag
     4801 tgctattttc gagcaaatta cacacagagg taaacactaa tgtttacttt gttg
//
LOCUS       DADMIB010000233         4852 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.236, whole genome shotgun sequence.
ACCESSION   DADMIB010000233 DADMIB010000000
VERSION     DADMIB010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4852
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.236"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..1250)
                     /locus_tag="JNZ89_004117"
     CDS             complement(<1..1250)
                     /locus_tag="JNZ89_004117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid carrier protein"
                     /protein_id="HAY8937798.1"
                     /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG
                     KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITTGGPRAVFWMWVAAFIG
                     MATSFAECSLAQLYKERDVNGQFCGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG
                     VQANAVARALSFSFDFPPLVTGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLT
                     SMVICVINIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG
                     STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNDTTYMPLEGIQ
                     LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNTPKAIWCLRIC
                     TFATVIGGTLLSLPLMWQLADIIMA"
     gene            1529..2482
                     /gene="tal"
                     /locus_tag="JNZ89_004118"
     CDS             1529..2482
                     /gene="tal"
                     /locus_tag="JNZ89_004118"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HAY8937799.1"
                     /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
                     IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS
                     YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
                     FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY
                     ETVVMGASFRNIGEILELAGCDRLTIAPTLLKELAESEGAIERKLSYTGEVKARPARI
                     TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL"
     gene            2597..3184
                     /gene="mog"
                     /locus_tag="JNZ89_004119"
     CDS             2597..3184
                     /gene="mog"
                     /locus_tag="JNZ89_004119"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HAY8937800.1"
                     /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSVLTTPFELET
                     RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ
                     MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAAGNVVVHGIFA
                     SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE"
     gene            complement(3219..3785)
                     /gene="satP"
                     /locus_tag="JNZ89_004120"
     CDS             complement(3219..3785)
                     /gene="satP"
                     /locus_tag="JNZ89_004120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HAY8937801.1"
                     /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF
                     YSGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY
                     LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC
                     GASAIYLAMGEVLNEQFGRTVLPIGESH"
     gene            complement(3934..4647)
                     /gene="msyB"
                     /locus_tag="JNZ89_004121"
     CDS             complement(3934..4647)
                     /gene="msyB"
                     /locus_tag="JNZ89_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HAY8937802.1"
                     /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM
                     RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL
                     KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAFDARVNELEELLPLLMKDKL
                     LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT
                     IPAVLQIACLRRMVSATQV"
     gene            complement(4673..>4852)
                     /locus_tag="JNZ89_004122"
     CDS             complement(4673..>4852)
                     /locus_tag="JNZ89_004122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HAY8937803.1"
                     /translation="ARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHT
                     VNSSDMATLKIIGDD"
BASE COUNT         1276 a         1249 c         1228 g         1099 t
ORIGIN      
        1 gccattatga tatctgccag ttgccacatc agcggaaggc ttagcaaggt gccgccgatg
       61 accgttgcga aggtgcagat ccgcaaacac cagatcgctt taggggtgtt caggcgtaaa
      121 aagaagagat tgttttcggc ataaatgtag ttggcaacga tggagctgaa ggcaaacaga
      181 ataaccacga gggtaacaaa ctcagcaccc caggaaccca ttagcacccg catcgccttc
      241 tggataagct gaataccttc cagcggcatg taggttgtgt cgttacccgc cagtaatatc
      301 agcatggcgc ttgccgtaca gatgaccagg gtgtcgataa aaatgccaat catctggaca
      361 atcccttgcg ctgccggatg cggaggccag gacgccgctg ccgctgccgc gtttggcgtc
      421 gaacccattc ccgcctcatt ggaaaacata ctgcgctgaa aaccgttagt aatcgcctgg
      481 cttaaggtat atcccgccgc gccgcctgcc gcttcctgcc agccaaaagc actctcaaaa
      541 atagaccaaa tgacgtgggg aagttgcccg atatttatta cgcaaatcac catgctggtc
      601 agcacccaga ttatcgccat caacgggaca aacccctgca tgagccgggc gacgccatga
      661 agaccgcgag tgattgccag cagagcaaag acagcgagaa taatgcctgt caccagcggg
      721 ggaaaatcaa aagaaaaact cagggctcgg gcaacggcgt tcgcctgaac tccgctgaaa
      781 attatgccgt aggcgatgag caaaaagacg gcgaacagaa cgcccatcca acgcatcccc
      841 agcccgcgcg ccatatacca tgccggtccg ccacaaaact gcccattgac gtcacgttct
      901 ttataaagtt gtgcaaggga acattcggca aacgaggtcg ccatgccgat aaacgcggca
      961 acccacatcc aaaagacggc tctaggtcca ccggtggtaa tagccagcgc aacgccggcc
     1021 aggttgccgc tacccacgcg cgccgcaaga ctggtacaca atgactgaaa tgaggttaaa
     1081 ccgcctggct gtggatgaat gctattttta agacttttgc caaactggcg gatgtagcga
     1141 aactgcacaa atccggtgcg aaaagtgaac caacaacctg cgccgaagag caggtaaatc
     1201 attaccgatc cccaaaggac gctgttaata aaggagaaaa aatctggcat gcatatccct
     1261 cttattgccg gtcgcgatga ctttcctgtg taaacgttac caattgttta agaagtatat
     1321 acgctacgag gtacttgata acttctgcgt agcatacatg aggttttgta taaaaatggc
     1381 gggcgatatc aacgcagtgt cagaaatccg aaacagtctc gcctggcgat aaccgtcttg
     1441 tcggcggttg cgctgacgtt gcgtcgtgat atcatcaggg cagaccggtt acatccccct
     1501 aacaagctgt ttaaagagaa atactatcat gacggacaaa ttgacctccc ttcgtcagta
     1561 caccaccgta gtggccgaca ctggggacat cgcggcaatg aagctgtatc aaccgcagga
     1621 tgccacaacc aacccttctc tcattcttaa cgcagcgcag attccggaat accgtaagtt
     1681 gattgatgat gctgtcgcct gggcgaaaca gcagagcaac gatcgcgcgc agcagatcgt
     1741 ggacgcgacc gacaaactgg cagtaaatat tggtctggaa atcctgaaac tggttccggg
     1801 tcgtatctca actgaagttg atgcgcgtct ttcctatgac accgaagcgt caattgcgaa
     1861 agcaaaacgc ctgatcaaac tctacaacga tgctggtatt agcaacgatc gtattctgat
     1921 caaactggct tctacctggc agggtatccg tgctgcagaa cagctggaaa aagaaggcat
     1981 caactgtaac ctgaccctgc tgttctcctt cgctcaggct cgtgcttgtg cggaagcagg
     2041 cgtgttcctg atctcgccat ttgttggccg tattcttgac tggtacaaag cgaatactga
     2101 taagaaagag tacgctccgg cagaagatcc gggcgtggtt tctgtatctg aaatctacca
     2161 gtactacaaa gagcacggtt atgaaaccgt ggttatgggc gcaagcttcc gtaacatcgg
     2221 cgaaattctg gaactggcag gctgcgaccg tcttaccatc gcacctacac tgctgaaaga
     2281 gctggctgag agcgaagggg ctatcgaacg taaactgtct tacaccggcg aagtgaaagc
     2341 gcgtccggcg cgtatcactg agtccgagtt cctgtggcag cacaaccagg atccaatggc
     2401 agtagataaa ctggcggaag gtatccgtaa gtttgctatt gaccaggaaa aactggaaaa
     2461 aatgatcggc gatctgctgt aatcattctt agcgtgaccg ggaagtcggt cacgctacct
     2521 cttctgaagc ctgtctgtca ctcccttcgc agtgtatcat tctgtttaac gagactgttt
     2581 aaacggaaaa atcttgatga atactttacg tattggctta gtttccatct ctgatcgcgc
     2641 atccagcggc gtttatcagg ataaaggcat ccctgcgctg gaagaatggc tgacatcggt
     2701 gctaaccacg ccgtttgaac tggaaacccg cttaatcccc gatgagcagg cgatcatcga
     2761 gcaaacgttg tgtgagctag tggatgaaat gagttgccat ctggtgctca ccacgggcgg
     2821 aactggcccg gcgcgtcgtg acgtaacgcc cgatgcgacg ctggcagtag cggaccgcga
     2881 gatgcctggc tttggtgaac agatgcgcca gataagcctg cattttgtac caactgcgat
     2941 cctttcgcgt caggttggtg tgattcgcaa acaggcgctg atccttaact tacccggtca
     3001 gccgaagtct attaaagaga cgctggaagg tgtgaaggac gctgcgggta acgttgtggt
     3061 acacggtatt tttgccagcg taccgtactg cattcagttg ctggaagggc catacgttga
     3121 aacggcacca gaagtggttg ctgcattcag accgaagagt gcaagacgcg acgttagcga
     3181 ataaaaaaat ccccccgagc ggggggatct caaaacaatt agtgggattc accaatcggc
     3241 agaacggtgc gaccaaactg ctcgttcagt acttcaccca tcgccagata gattgcactg
     3301 gcaccacaga tcagaccaat ccagccggca aagtggatga ttgcggcgtt accggcaatg
     3361 ttaccgatcg ccagcagggc aaacagcaca gtcaggctaa agaaaacgaa ttgcagaacg
     3421 cgtgcgcctt tcagcgtgcc gaagaacata aacagcgtaa atacgcccca cagacccagg
     3481 tagacaccaa ggaactgtgc atttggcgca tcggtcagac ccagtttcgg catcagcaga
     3541 atcgcaacca gcgtcagcca gaaagaaccg taagaggtga atgcggttaa accgaaagtg
     3601 ttgccttttt tgtactccag cagaccagca aaaatttgcg cgatgccgct gtagaaaatg
     3661 cccatggcaa gaataatacc gtccagagcg aaataaccca cgttgtgcag gttaagcaga
     3721 atggtggtca tgccgaagcc catcaggccc agcggtgccg gattagccaa cttagtgttg
     3781 cccataattc ctcaaaaatc atcatcgaat gaatggtgaa ataatttccc tgaataactg
     3841 tagtgttttc agggcgcggc ataataatca gccagtgggg cagtgtctac gatcttttga
     3901 ggggaaaatg aaaattttcc ccggtttccg gtatcagacc tgagtggcgc taaccatccg
     3961 gcgcaggcag gcgatttgca gtacggctgg aatcgtcacg cgataggcgc tgccgctgac
     4021 cgctttaacc ccatttagtg ccgcacctac agggcctccc agccccgcgc cgcgcagcaa
     4081 accatgccca agtacgctca ttgctgcgtg ggtgcgtaaa atgcgggtca gttggctgga
     4141 aagcaaatgc gacacgcctt ttgccaataa tttgtctttc atcagcagcg gcagcagctc
     4201 ttccagctca ttcaccctcg catcgaacgc gtgcagaaac tcctgcttat gttcctcgtc
     4261 cattttcttc caggtattac gcagaaattg ttccagtaac tgttgctcaa tttcaaacgt
     4321 agacatctct ttgtcggctt tcagcttcaa tcgttttgaa acatcgagca aaatggcccg
     4381 atacaattta ccgtgtccgc gcagtttgtt ggcgatacta tcgccaccaa aatgctgtaa
     4441 ttctccagca atcagctgcc agttgcggcg atgttgctcg ggatgccctt ccatcgattt
     4501 aaacagttcg ttgcgcatca gtacgctgga gaggcgagtt ttgccttttt cattatgggt
     4561 gagcaatcgg gcgaaatttg ccaactgttc ctcactacaa tgctgaagaa aatccagatc
     4621 tgaatcattc aggtaattaa cattcatttt ttgtggcttc tatattctgg cgttagtcgt
     4681 cgccgataat tttcagcgtg gccatatccg atgagttcac cgtatgaccg gaaaaggtga
     4741 tttttgagac gcagcgttta ttgtcgttat cactgttaat gttgatccag tcagtggttt
     4801 gcccttcttt tatttctgaa ggaatattca gactctgact ggcgctacgg gc
//
LOCUS       DADMIB010000234         4834 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.237, whole genome shotgun sequence.
ACCESSION   DADMIB010000234 DADMIB010000000
VERSION     DADMIB010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4834
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.237"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..596)
                     /locus_tag="JNZ89_004123"
     CDS             complement(<1..596)
                     /locus_tag="JNZ89_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000787050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HAY8937804.1"
                     /translation="MKNEIWSWIGDLSQVAGIKHYELRSGRAKGTEAFDVRTGAGLAF
                     TVVKDRALDIAWASYKDTALSFITPNGIVAPAFFESQGNGFLRSFYAGLLTTCGLSYI
                     GTPCEDEGETLGLHGRLAATPAEEVGYRTERTDDGIEFVINGKVRETRLFGENLTLER
                     TIRCRYGENVLRIEDKVTNHGFTRQPLQILYHFNYGWP"
     gene            complement(593..1555)
                     /locus_tag="JNZ89_004124"
     CDS             complement(593..1555)
                     /locus_tag="JNZ89_004124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8937805.1"
                     /translation="MSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQ
                     VTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDR
                     DFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGG
                     VISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHSTPERAIAGFLEE
                     GVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDVHR
                     ALQYANACGALAVTRRGPMEGTSRLAEIEAFIQRHDMSIREAAQ"
     gene            complement(1577..2566)
                     /locus_tag="JNZ89_004125"
                     /pseudo
     CDS             complement(1577..2566)
                     /locus_tag="JNZ89_004125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525780.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(2567..4066)
                     /locus_tag="JNZ89_004126"
     CDS             complement(2567..4066)
                     /locus_tag="JNZ89_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY8937806.1"
                     /translation="MTDVILDVSHIAKTFGHVQALKDITLSLRKGRVHTLLGENGAGK
                     STLMKILAGVYPPTQGTITLRGETITINNPQHSRQLGIAIIFQELSLSNNMTVAENIY
                     ANNEPRRFGIINDKKMLADCQNLLAERGIPLDPLEMVGNMSMAHRQLVEIAKALSYAA
                     DVVIMDEPTSSLSDNEAEILFNIIEKLKQRGCAVIYISHRMDEIMRISDDISVIRDGE
                     YIATHEKKNSDIQHLIAQMVGREMKNIWPARLGEIPDENVPAKLEVKNLSHPSLFKEI
                     SFAVRPGEVLGFFGLVGAGRSDVMKALFGLVSYQGTVLIDGKEVRITNPKQAIDHGIA
                     FVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINHRQEEAKTLQSIARMNTKVSS
                     VHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDVGAKFEIYNVIRQLAAAGT
                     AIILVSSELPEVMALSDRLVVMRNKTIADIYSCENLTQTQVMTAATGVR"
     gene            complement(4127..>4834)
                     /locus_tag="JNZ89_004127"
     CDS             complement(4127..>4834)
                     /locus_tag="JNZ89_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HAY8937807.1"
                     /translation="LFANQDLNKQLSDVEDFITKKVDAIIISPVDSKGVQAAIIKADK
                     AGIPVITVDVAAEGVPVVSHVATDNYAGGVEAGKLMGKLLNGKGTVAIISYPALQSVV
                     ARVDGFKKGLSDTPDIKIVAEQPSITRAEALTTAQNIMQANANLNGLFGFGDDAALAA
                     VIAAKSAHNDNIKIIGFDGMKEARDAVDSEKTFAAVIRQYPDQMGAKAIDAAVDHLNG
                     KPVEKMIPVQPGVYTGK"
BASE COUNT         1331 a         1233 c          986 g         1284 t
ORIGIN      
        1 aaaggccagc cgtaattaaa gtgataaaga atttgcagcg gctggcgggt gaaaccatga
       61 ttagtcacct tgtcttcaat gcgcagcaca ttttcgccat aacggcagcg aatggtcctt
      121 tccagcgtca gattttcgcc gaacagtcgc gtttcccgta ctttgccatt gatgacaaat
      181 tcaatgccgt cgtcggtccg ttctgtgcga taccccacct cttctgctgg agtcgcagcc
      241 aaacgcccgt gtaaccccag cgtttctcct tcatcctcac aaggcgtgcc aatgtagcta
      301 agtccgcagg tagtcagtaa ccccgcgtaa aagctacgta aaaatccgtt gccctgagac
      361 tcaaaaaaag cgggggcgac aatgccgttg ggggtgataa aagaaagcgc cgtgtccttg
      421 tagctggccc atgcaatatc cagcgcgcga tcttttacca ccgtaaatgc cagtcccgca
      481 ccagtacgga catcaaacgc ttctgtaccc tttgctctgc cactacgtaa ctcatagtgt
      541 ttaattccgg caacctgcga gagatcgcca atccacgacc aaatttcgtt tttcattgtg
      601 ctgcttcccg aatggacatg tcatggcgct ggatgaacgc ttcgatttcc gcaaggcgag
      661 acgttccctc cattgggcca cgtctggtta ccgccagcgc accgcaggca ttggcatatt
      721 gcagcgctcg atggacgtca aaccctagct ggcggcaggc aatccacgcg ccaccaaagc
      781 agtctcccgc accggtcggg tcaacttctt ccaccggata gctctcaaca tgaaactgct
      841 cattcgcgga gtagtaactg gcaccttgat tgccgcgctt cacaatcacc tctttaacac
      901 cttcttcaag aaaacctgcg attgcacgct ccggcgtcga atgtggcgac aagagcaaca
      961 cttcgccctc gctgggcata tagatatccg ttaactcaag aacaaagtgg agggcgtcac
     1021 gcatttctgg aatatcgagc atctctttac gaatattagg gtcgaaagaa ataacaccac
     1081 catttgcttt aacgatagtt accgcttttt ttactgcgtc taccatatga aacgaaaaca
     1141 gggaagagcc cataatatga aaatgggtac agtccttcag aatattttca tcaacatgct
     1201 gcgccgataa tttaccgcaa gcggcattct taatattaaa aataaaatcg cgatcgccag
     1261 agttatgata agtaacaaag gcactcccgg tagcttccag aggtaagact gaaatccccc
     1321 tgatatccac accgtcagca gccagacgat gtatattaat atcaccaaag ccatcattcc
     1381 ccacacagct aatgatgccg cacggaacgc caagacgtgt cacctggtcg ataaaaatag
     1441 cgggcgcacc actgggataa gggccgttcc agatacctgg ttgatcaaat ggctggccga
     1501 ttttactcgc cataatttca accagaattt ctccaattgt gaagacctta ctcatatgat
     1561 taattccttg aaatgattag ctgcgttttc ttttatttct tacgtcaaaa taaacggcta
     1621 caagaatgac taatccttta accaccatct ggtaaaaata gggaacattc attaagttca
     1681 tgccattatt aataacgccg atagttaatg cgccgatcac cgtccccacc acggttccat
     1741 agccgccgtt caggctggtg cctcccagta cagccgcagc aatagcatcc agttcgtagc
     1801 tcaacgcgga attcggttac ccggaataga ggcgtgaggc gaggatcatc ccgctgatac
     1861 ctgccagcac ggctgtaatc ataaagactt taattttcaa gcgggtgaca tttatccctg
     1921 aataaattgc cgcttcttta ttaccaccag tgatataaat ttttcgtcca aaggttgttt
     1981 tagtaagaat gaagtggtta atcagcaata agatgattaa tatccagatt ggaataggta
     2041 tatagagaaa ttctccattc cccagtgcca gaaaggcatc atctttaatc atgatgggca
     2101 taccatcggt cactatataa gcgataccac ggaagatccc catagtagca acggtgacaa
     2161 taaacgacgg gatccccgct atagccgtca agccaccatt tatcatcccc agagccagtg
     2221 ctgcaataat ggataatggg accaataaaa taaatggaat tccccatgaa gccccaagcg
     2281 cagcaaatgt gccaatcaat gcaatggttg aaccgaccga taaatcaata tcgccaagca
     2341 aaagtacata agtcattcca taggcggtaa ttgcaattat cgaaacctga agaataatat
     2401 tagtaatgtt gttggcggta aaaaaactgt cattaataaa actgaacaga atgattaaca
     2461 ccaccattcc actgaggata ccgccatatt gcctgaagac ttttttaaaa ttatttgcaa
     2521 tgggaatttc cgaaggtttc ggactggcaa gagttttctc tgtcatttaa cgtactcctg
     2581 ttgcagcggt cattacctgt gtctgcgtta aattttcaca tgaataaata tcggcaatcg
     2641 ttttattacg cattaccacc agacgatcgc taagtgccat gacttctggc agttcagagg
     2701 acaccagaat aattgctgtc cctgccgcag ccagttgacg tatcacgtta tagatttcaa
     2761 attttgcgcc gacatccact ccgcgcgttg gctcatcgag caataaaata cgcggagttt
     2821 tctccagcca cttcgataac acgattttct gttgattacc gccgctcagc gctcccactg
     2881 cctgatgtac agaactcact ttagtgttca ttctggcaat tgattgcagc gtcttcgcct
     2941 cttcttgtcg gtgattgatg agtcccatcc gcgaagcgtt atattgaaac gccacatggt
     3001 gcgtgttcat attgacgtcg tgcatcagca ctaacccttc ttccttgcgg ttttcggtca
     3061 caaaagcaat gccatgatca atagcctgtt taggattagt gatcctgact tccttaccat
     3121 caatcaacac agtcccctga tacgaaacga ggccaaagag cgccttcatc acatcggaac
     3181 gcccggcccc caccaggcca aaaaatccga ggacctcccc cggacgcaca gcgaaactga
     3241 tctctttaaa aagcgaagga tgggaaagat tttttacttc cagttttgca ggaacatttt
     3301 catccggtat ttccccaaga cgtgctggcc aaatattttt catttcccga ccaaccattt
     3361 gggcaatcaa atgctggata tcactgtttt tcttttcatg cgtggcgata tactcaccgt
     3421 cgcggatcac cgaaatatca tctgaaatcc gcataatttc atccatgcga tgagagatat
     3481 aaataaccgc acagcctcgc tgctttaatt tttcaataat gttaaacaga atctccgctt
     3541 cattatcact tagcgaagat gtcggttcat ccataatcac gacatccgct gcatagctta
     3601 aggctttagc aatttctacc agttgcctat gtgccatcga catattgccg accatttcta
     3661 gtgggtctag tggtatgccc cgttccgcga ggagattctg gcaatctgcg agcatttttt
     3721 tatcgttaat aatgccaaaa cgtcgcggtt cattattggc ataaatattt tccgccacgg
     3781 tcatattatt actcaggctc aattcctgaa aaataatcgc aattcctaac tggcgtgaat
     3841 gctgcggatt attaatggtg atagtttcac cacgtagtgt tatcgttccc tgggttggcg
     3901 gataaacacc ggccagtatt ttcattaatg tcgatttacc ggcaccattc tcgcctaata
     3961 aagtatgcac ccgcccttta cgtaaagaga gggtaatatc ttttaatgct tgaacatgac
     4021 caaatgtctt cgcaatatgc gaaacatcaa gaataacatc cgtcataatg acctcggtgt
     4081 cacaacaaaa cgccaataac gttttgttgt gaggtgaaga tgtttactat ttacctgtat
     4141 aaacgccggg ttgtaccggg atcatttttt ctaccggttt accattgagg tgatcaacag
     4201 cggcatcaat ggctttagca cccatttgat cgggatattg ccgaatcacg gccgcaaacg
     4261 ttttttcact gtcaacggca tcacgcgctt ctttcatgcc atcaaaacca atgattttga
     4321 tgttgtcgtt atgcgcagat tttgctgcga taaccgctgc cagcgccgca tcatcaccaa
     4381 agccaaacag accattcagg ttggcatttg cctgcataat gttttgcgca gtcgttaacg
     4441 cttcagcccg cgtaatacta ggctgttcag caacaatttt aatatccggt gtatcgctta
     4501 accctttctt aaaaccatca acgcgcgcaa ccaccgattg tagtgccgga taagaaataa
     4561 tggctacagt acctttacca ttcaaaagtt tgcccattaa cttgcctgct tcaacgcctc
     4621 ccgcatagtt atcggtcgca acatgcgata cgaccggaac gccttccgca gcgacgtcga
     4681 cggtgataac gggaataccg gccttatcgg ctttaattat cgccgcctgg acgcctttcg
     4741 aatcgaccgg agagataata atggcatcca cttttttagt aataaaatcc tcaacatcag
     4801 aaagttgttt gtttaaatcc tgattggcaa atag
//
LOCUS       DADMIB010000235         4822 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.238, whole genome shotgun sequence.
ACCESSION   DADMIB010000235 DADMIB010000000
VERSION     DADMIB010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4822
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.238"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1078
                     /locus_tag="JNZ89_004128"
     CDS             <1..1078
                     /locus_tag="JNZ89_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001243518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY8937808.1"
                     /translation="YCPKHGALVFFDRAVDDHRHQFWALGHTELLSDYPKDSLSQLTA
                     LAAYIAPLLDAPRAQELSPSLEQWTLFYQRLAQDLGLTKSKHIRHDLVAERVRQTFSD
                     EALEKLDLKLAENKDTCWLKSIFRKHRKAFSYLQHSIVWQALLPKLTVIEALQQASAL
                     TEHSITTRPVSQSVQPNSEDLSVKHKDWQQLVHKYQGIKAARQSLEGGVLYAWLYRHD
                     RDWLVHWNQQHQQERLAPAPRVDWNQRDRIAVRQLLRIIKRLDSSLDHPRATSSWLLK
                     QTPNGTSLAKNLQKLPLVALCLKRYSESVEDYQIRRISQAFIKLKQEDVELRRWRLLR
                     SATLSKERITEEAQRFLEMVYGEE"
     gene            1079..2695
                     /locus_tag="JNZ89_004129"
     CDS             1079..2695
                     /locus_tag="JNZ89_004129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000251878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY8937809.1"
                     /translation="MVRLATFNDNVQVVHIGHLFRNSGHKEWRIFVWFNPMQERKWTR
                     FTHLPLLSRAKVVNSTTKQINKADRVIEFEASDLQRAKIIDFPNLSSFASVRNKDGAQ
                     SSFIYEAETPYSKTRYHIPQLELARSLFLINSYFCRSCLSSTALQQEFDVQYEVERDH
                     LEIRILPSSSFPKGALEQSAVVQLLVWLFSDQDVMDSYESIFRHYQQNREIKNGVESW
                     CFSFDPPPMQGWKLHVKGRSSNEDKDYLVEEIVGLEINAMLPSTTAISHASFQEKEAG
                     DGSTQHIAVSTESVVDDEHLQLDDEETANIDTDTRVIEAEPTWISFSRPSRIEKSRRA
                     RKSSQTILEKEEATTSENSNLVSTDEPHLGGVLAAADVGGKQDATNYNSIFANRFAAF
                     DELLSILKTKFACRVLFEETLVLPKVGRSRLHLCKDGSPRVIKAVGVQRNGSEFVLLE
                     VDASDGVKMLSTKVLSGVDSETWRNDFEKIRRGVVKSSLNWPNSLFDQLYGQDGHRGV
                     NHPKGLGELQVSREDMEGWAERVVREQFTH"
     gene            complement(2751..2903)
                     /locus_tag="JNZ89_004130"
                     /pseudo
     CDS             complement(2751..2903)
                     /locus_tag="JNZ89_004130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011069623.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(2926..3303)
                     /locus_tag="JNZ89_004131"
     CDS             complement(2926..3303)
                     /locus_tag="JNZ89_004131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937810.1"
                     /translation="MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSF
                     DHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAA
                     LKNSLDYYYGSSVIPPQNHGGYL"
     gene            complement(3713..4084)
                     /locus_tag="JNZ89_004132"
     CDS             complement(3713..4084)
                     /locus_tag="JNZ89_004132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000119696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937811.1"
                     /translation="MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELD
                     NAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATY
                     FSPNGQLVGLVAYIDAEWMDE"
     gene            complement(4145..4642)
                     /locus_tag="JNZ89_004133"
     CDS             complement(4145..4642)
                     /locus_tag="JNZ89_004133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001444089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937812.1"
                     /translation="MRDLLKVVLSLVLAMASGQALADLPIVLVDEARLPYDYSPSNYD
                     ISPSNYDNSISNYDNSPSNYDNSESNYDNSSSNYDNSRNGNRRLIYSANGSRTFAGYY
                     VIANNGTTNFFSTSGKRMFYTPKGGRGVYGGKDGSFCGALVVINGQFSLALTDNGLKI
                     MYLSN"
     gene            complement(4718..>4822)
                     /locus_tag="JNZ89_004134"
     CDS             complement(4718..>4822)
                     /locus_tag="JNZ89_004134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'') family aminoglycoside
                     nucleotidyltransferase"
                     /protein_id="HAY8937813.1"
                     /translation="QAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK"
BASE COUNT         1331 a         1018 c         1181 g         1292 t
ORIGIN      
        1 atattgtcca aaacacggtg ctttagtctt ctttgataga gctgtagatg atcaccgaca
       61 tcaattttgg gctttgggtc atactgagct gctttcagac taccccaaag actccctatc
      121 tcaattaaca gcactagctg cttatatagc ccctctgtta gatgctccac gagcgcaaga
      181 gctttcccca agccttgagc agtggacgct gttttatcag cgcttagcgc aggatctagg
      241 gctaaccaaa agcaagcaca ttcgtcatga cttggtggcg gagagagtga ggcagacttt
      301 tagtgatgag gcactagaga aactggattt aaagttggca gagaacaagg acacgtgttg
      361 gctgaaaagt atattccgta agcatagaaa agcctttagt tatttacagc atagtattgt
      421 gtggcaagcc ttattgccaa aactaacggt tatagaagcg ctacagcagg caagtgctct
      481 tactgagcac tctataacga caagacctgt tagccagtct gtgcaaccta actctgaaga
      541 tttatctgtt aagcataaag actggcagca actagtgcat aaataccaag gaattaaggc
      601 ggcaagacag tctttagagg gtggggtgct atacgcttgg ctttaccgac atgacaggga
      661 ttggctagtt cactggaatc aacagcatca acaagagcgt ctggcacccg cccctagagt
      721 tgattggaac caaagagatc gaattgctgt acgacaacta ttaagaatca taaagcgtct
      781 agatagtagc cttgatcacc caagagcgac atcgagctgg ctgttaaagc aaactcctaa
      841 cggaacctct cttgcaaaaa atctacagaa actgcctttg gtagcgcttt gcttaaagcg
      901 ttactcagag agtgtggaag attatcaaat tagacggatt agccaagctt ttattaagct
      961 taaacaggaa gatgttgagc ttaggcgctg gcgattatta agaagtgcaa cgttatctaa
     1021 agagcggata actgaggaag cacaaagatt cttggaaatg gtttatgggg aagagtgagt
     1081 ggttaggcta gctacattta atgacaatgt gcaggttgta catattggtc atttattccg
     1141 taactcgggt cataaggagt ggcgtatttt tgtttggttt aatccaatgc aagaacggaa
     1201 atggactcga tttactcatt tgcctttatt aagtcgagct aaggtggtta acagtacaac
     1261 aaagcaaata aataaggcgg atcgtgtgat tgagtttgaa gcatcggatc ttcaacgagc
     1321 caaaataatc gattttccta atctctcgtc ctttgcttcc gtacgcaaca aggatggagc
     1381 gcagagttca tttatttacg aagctgaaac accatatagc aagactcgtt atcacatccc
     1441 acagttagag ctagctcggt cattattttt aattaactcc tatttctgtc gaagctgttt
     1501 gagcagtacc gctttacagc aagagttcga cgttcagtat gaggttgagc gagatcattt
     1561 agagataagg atcttaccca gttcatcgtt tcctaaaggg gcgttagagc agtcggccgt
     1621 agtgcagctt ttggtttggt tgttttcgga tcaagatgtt atggattcgt atgaaagtat
     1681 ttttaggcac tatcaacaaa atagagaaat taagaacggc gttgaaagct ggtgctttag
     1741 ctttgaccct ccgcccatgc agggttggaa attacatgta aaaggacgtt cttctaacga
     1801 ggataaggat tatttagttg aggaaatagt aggtttagaa atcaacgcta tgcttcctag
     1861 cacaacagct attagccatg cctcttttca ggaaaaggag gcaggtgatg gtagtacgca
     1921 gcacatagcg gtttcaacag agtcagttgt tgatgatgag catctacagt tggacgatga
     1981 ggaaacagcc aatatagaca cagacacacg agtcatagag gctgagccga catggataag
     2041 ttttagtaga cctagtcgaa ttgaaaaatc tcgcagggca agaaaaagta gccaaactat
     2101 tttagaaaaa gaagaagcaa caacaagtga aaatagtaat ttggttagta ctgatgagcc
     2161 acacttaggt ggtgtcctag cagcggcaga tgtgggtggg aagcaggatg caaccaatta
     2221 caactctatt tttgctaatc gatttgctgc ttttgatgag ctactttcaa ttctaaaaac
     2281 taaatttgca tgtcgggtgc tttttgaaga aaccttggtt ttgccaaaag ttgggcgtag
     2341 ccgattacat ctgtgtaaag atggctcacc aagagtgatt aaagccgttg gggtgcaacg
     2401 taatggcagt gaatttgtat tgctagaggt ggatgcatcg gatggggtga aaatgctttc
     2461 taccaaagtg ttgagtggcg ttgatagcga aacatggcgg aatgattttg aaaagatacg
     2521 gcgtggagtg gtgaagagct cattgaattg gccaaatagt ttgtttgatc aattatatgg
     2581 acaagacggg catagagggg tgaatcatcc aaaggggttg ggggagctgc aagtatcgag
     2641 agaggatatg gaagggtggg ctgagagagt ggttagagag caatttacgc attaaaggaa
     2701 tgactgaaag agcctgtaaa cccttttgtg taagtgcttt tgccggtcag ttaaaggtgg
     2761 ccatttaaac ggtcaccaaa ttcgatcata aaacggttca tggccggctt ccagttgcgg
     2821 atcggcatcg tccatttctt ggtcgccgcc tggatagcca ggtacaccac cttcatcgct
     2881 gattcgtccg tagggaacac cttgagttca tattaatgga attttctaca aatagcctcc
     2941 gtggttttga ggggggatta cagacgatcc atagtagtaa tccaatgagt tcttgagcgc
     3001 ggcgacatgt ttggacgcct tggcaaaaat tagagcctgc ttgaagtgca ggcgagcacg
     3061 tgcttggacg attgatccat tcgcggtcaa aaactcaatc ttggatgaca gcgtgtcagg
     3121 aaatccaata tcgaagtccc gccccgtgtc aaagtagggc atttcatgat caaaggacga
     3181 agcttcccag gccacttccc taatattcca gccgctagaa acaagatttc gtacgacttc
     3241 atcaactttt ttgctttcca acttgtcaca aagtgcatag gcaagagctt tggcggcaga
     3301 cacgtgcgtt tcctcttaaa cataggtcga acggataccc gaggcaaagc ggagcattag
     3361 tcccaaagca tctccggtag atccggaggc tccatactga aggcatggca tcttgggcat
     3421 tgatatttga aacttctctc tagatagcag ggatttcttg gccttgcctc atgctgatag
     3481 cttgtaaata tcacacgatc cttagcccca caaagtgagc atactccgta gctttcattt
     3541 atagaaatcg tcgttagatt gtcgcagcat gtgcacgttc cgactatttg ctcaggaagc
     3601 atcgccatac cttggcctag gtaaagaaga tcagactcgt agccacatcg gtggcaactg
     3661 agcttgtacg caatgcccat ctggttgtct cacctgaatc gtaacgtcag agctattcat
     3721 ccatccattc ggcatcaatg tatgccacta agccgaccag ctgaccgttt ggactgaagt
     3781 atgttgcctg caccccactt gacatctcat caataccacc gcactgcgct aggcgccggt
     3841 cccacttgcc cacagaagcg tcaggatcgg ctgagttccc caagaccctt gtgagccatg
     3901 cctcctttaa ctcaacctct cgaatgattg cgtcggccag ctcctccgcg ttatctagtt
     3961 cgacatagtc tggaattcgg acgtacgttc tgaacacagc tggatactta cttgggcgat
     4021 tgtcatacat gacatcaaca atgtacccgt ttgtgtaacc gtctcttgga ggttcgtatg
     4081 acactagtgg ttcccctcag cttgcgacta gatgttgagg cctaacattt tattagagag
     4141 caggctagtt gcttagatac atgatcttca ggccgttatc tgtcagggca agcgaaaatt
     4201 ggccatttat gacgaccaat gccccgcaga agctcccatc tttgccgcca tagacgccgc
     4261 gccccccttt tggggtgtag aacatccttt tgccagatgt ggaaaagaag ttcgttgtcc
     4321 cattgttggc aatgacgtag tagccggcga aagtgcgaga cccatttgcg ctatatataa
     4381 gcctacgatt tccgttgcga ctattgtcgt aattggatga actattatcg tagttgctct
     4441 cagagttgtc gtaatttgat ggactattgt cgtaattgct tatggagttg tcgtagttgc
     4501 ttggagaaat gtcgtagttg gatggggagt agtcataggg aagacgagct tcatccacta
     4561 aaacaattgg caggtcagca agtgcctgcc ccgatgccat cgcaagtacg aggcttagaa
     4621 ccaccttcaa cagatcgcgc atagtcttcc ccagctctct aacgcttgag ttaagccgcg
     4681 ccgcgaagcg gcgtcggctt gaacgaattg ttagacatta tttgccgact accttggtga
     4741 tctcgccttt cacgtagtga acaaattctt ccaactgatc tgcgcgcgag gccaagcgat
     4801 cttcttgtcc aagataagcc tg
//
LOCUS       DADMIB010000236         4729 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.239, whole genome shotgun sequence.
ACCESSION   DADMIB010000236 DADMIB010000000
VERSION     DADMIB010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.239"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..801)
                     /locus_tag="JNZ89_004135"
     CDS             complement(<1..801)
                     /locus_tag="JNZ89_004135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY8937814.1"
                     /translation="MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEW
                     LYGRDPERLQRGERSGGLGGSNLTTPEWFNSIHTLFPQQVIERLESDAVLRYGIEDVV
                     TNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVRQVVEEIMARLAKEVRQAFS
                     GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLV
                     LLVDQSGSMVDSVIPSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVAD"
     gene            complement(794..3073)
                     /locus_tag="JNZ89_004136"
     CDS             complement(794..3073)
                     /locus_tag="JNZ89_004136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937815.1"
                     /translation="MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRV
                     DELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDL
                     PCWAQSEEVDDSPDTQEESQALLLRATRMDNSDTLWDHLFEDESQQIALPSALAHYFA
                     QLRGDFPGDALNRQREAFMARWIAWAVQRNNGDVLVVCGGWHAPALAKMWRECPQEIN
                     KPELPSLANAVTGCYLTPYSEKHLDVLAGYLSGMPAPVWQNWCWQWGLQQAGEQLLKT
                     VLTRLRQHNLPASIADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPL
                     PWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAE
                     LTLNRFTPDGLAQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEEHWKLTRPLSQHAAL
                     IEAACFGATLQEAARHKLEADMLDAGGIGSITTCLSQAALAGLASFSQQLLEQLTLLI
                     AQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCAAIDRTLWLCESNGRPDEK
                     EFHAHLHSWQALCHILRDLHSGVNLSGVSLSAAVALLERRSQAIHAPALDRGAALGAL
                     MRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLS
                     DANFINALPDLRAVMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHH
                     QQLEQQALASLQHWGVFHV"
     gene            complement(3084..4172)
                     /locus_tag="JNZ89_004137"
     CDS             complement(3084..4172)
                     /locus_tag="JNZ89_004137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310954.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HAY8937816.1"
                     /translation="MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAAR
                     AFILGDSAQNISRKVVISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISG
                     DAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITR
                     TPLEVQDCLLGMLSDRVMTVPELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKR
                     RFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLHANGEK
                     KTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGEPADLVDCIAGTIVKDNEEDRAR
                     LRRYFEQRVATHKEAHWQAYYQARHRLP"
BASE COUNT         1103 a         1251 c         1293 g         1082 t
ORIGIN      
        1 atcggcaacg tctgccgtga gatcaacgac gcttgtgtca aacgccacca gatgggtacg
       61 aatgccgggt aactgccaca aacaggccgc catcaccgca gaggggatca ccgaatcgac
      121 catcgagccg ctttgatcaa ccagtaagac cagttgccat tgttcgcttt ggcgtttaat
      181 gcggctgtta aagcgggggg attcgatata caacttgccg tgttgcgggt gccagtgttg
      241 caggttggcg cgcagagtac ttttgaaatc aaagtttcgc gccagtggaa taaatgagcg
      301 gcgacggcga tcgcggacac cagaaaaagc ctgacgaact tcctttgcca gtcgcgccat
      361 aatttcttca acaacctggc gcacaatcct gcgggcggca gccagtactt cggggttcat
      421 cagatgtttg gtgtgcaaaa cggcgcgtag caggctttcg gaaggctgca tacgttccag
      481 cacgtcgaga tttgtcacca catcttcaat gccgtagcgc agtacggcat cgctttccag
      541 ccgctcaatc acctgttgcg gaaacagcgt gtggatactg ttgaaccact caggagtggt
      601 gagatttgag ccacctaatc caccagagcg ttcaccacgc tggagccgtt caggatcgcg
      661 cccatacagc cactccagcg cgtgatctat ctgccgggcg ttgtcatcca gcccacaaag
      721 cgtcgtttct gccgcttcgc caagaattaa tcgccagcgt tgtagctcac gggtggtcag
      781 aagatcgttc agttcagaca tggaaaactc cccagtgttg cagcgatgcc agtgcctgct
      841 gttcgagttg ttgatgatgt gcaatggctt gcggtggaca atgcaacggc atttgcagtg
      901 ccgaaacggg aagttgcgcc agttgataat gctcaagcac ctgatgcgcc agcgtcccgc
      961 gttctcgtgg cggtagccag gccatcaccg cgcgtaaatc gggcagggca ttgataaaat
     1021 tggcatcact cagttgattc aaatggctgc tgaaaccggc gataaatgca ggttgacagg
     1081 ccagttgatg acgggctaat gccagcaaac cgtgcagcgc ctcgccggat tgtgccgggg
     1141 ataactgcgc cagcatcgtc agcgccgctt cggcactggc gttgggatgt tccagacgca
     1201 ttagtgcgcc aagagccgcg ccgcgatcca gcgccggggc atgaatcgcc tgactgcgtc
     1261 gctccagtaa ggctaccgcc gcagaaagcg aaacgccgga taaattaacg ccgctatgta
     1321 gatcgcgcag aatatggcaa agcgcttgcc agctatgcag gtgagcgtga aactcctttt
     1381 catccggtct gccgttagat tcacacagcc acagcgtgcg atcgatagcc gcgcataacg
     1441 tcgtttgtaa tatctgcgcg ccttgcatac cgctaatttc atccagccgc cataaggcat
     1501 atagcacttc cagcgcctgg cccatttcgg caaattgatt ttcctgggcg attaataatg
     1561 tgagttgctc cagtaattgt tgactgaagg acgccagacc cgctaacgcc gcctggctaa
     1621 gacatgtggt gatactgccg atgccacccg cgtccagcat atcggcttct aatttatggc
     1681 gtgcggcttc ctgaagtgtt gcaccaaagc atgcggcctc aatcaatgcc gcatgctggc
     1741 taagcgggcg ggttaatttc cagtgttctt caccgttgcc tgcaagtgtc agtgtacttc
     1801 cctgctggcg tacaatccca gggatctcca gtattgccag ccgatgtaac acctgacttt
     1861 gcgccagccc atcgggggta aagcgattta aggtaagctc cgccggaaga gagattgcgg
     1921 tacgttccag ttcgcaggtg acatcttttg gcagaggcgg ttgtggcgtg gaaggggcaa
     1981 gtttaccgaa tccgtcaccc gctaatgtgt ctatcaacgt tagcagaatc ggatcggtat
     2041 cgggatgaat aacgccgcga tagctccacg gcaacggtgc attcagggct tctttaatca
     2101 gcgagcctgc tatggcatcc agccagtcag tgcgtaacgg tagtgtatga ccgcgcaact
     2161 gtgccagtgc cattgcatgc agatgtgcgg cagccatatc cgcgatcgaa gcaggcaagt
     2221 tgtgctggcg caaacgggtg agaaccgttt ttagcagttg ttcaccggcc tgctgtaagc
     2281 cccactgcca gcaccagttt tgccagaccg gggcaggcat accggaaagg tatcctgcca
     2341 gcacatcaag gtgcttttca ctgtaggggg tgagataaca acctgtaacg gcatttgcca
     2401 gcgagggcaa ttctggcttg ttaatttcct gcggacattc gcgccacatt tttgccagtg
     2461 caggagcgtg ccagccaccg cagacgacta acacgtcgcc attatttcgc tgcaccgccc
     2521 atgcaatcca gcgagccata aaggcttcgc gctgacgatt gagtgcatcg ccggggaaat
     2581 cgccccgcag ttgggcaaaa tagtgcgcca gcgcagaggg taatgcaatt tgctggcttt
     2641 catcttcgaa caagtgatcc cacagggtgt cgctgttatc catgcgggtg gcacgcagca
     2701 gcaaggcctg gctttcctct tgcgtatcag gcgaatcgtc cacttcttca ctctgcgccc
     2761 agcaaggcaa atcgatgaag taagtttgtg cctgaatacg acgtgcggct tgtagcgcct
     2821 gccactccgg cgaaaattca gcaaatggcg tccaggcacc acgcccgggg gctgcaccgt
     2881 cctgatactg gcaataactg taaatagcta ccggaagctg gtgggctaaa aacagttcgt
     2941 ctacccggtc attaaaatca gccgggcctt caatcaatac gtatcgtggc cgctggcttt
     3001 cgattaacga tttcaccagc cgggcgcagg ccggactatg atgccggatg ccgacaatta
     3061 acggctcgct catgcatctt tcctcacggc aggcggtggc gggcttgata ataagcctgc
     3121 cagtgagctt ctttatgtgt ggcgactcgt tgttcgaagt aacggcgcag acgagcgcga
     3181 tcttcttcgt tatctttgac gatggttccg gcaatgcagt ccaccaggtc ggctggctca
     3241 cctgcgcgat tcgctaaaaa ccaggcgcgg acgcctacgg cgtgggccac gttcacggct
     3301 tcagcggtgg acataatcgc tgttagtgta tccattgacg ttttcttttc gccgttggca
     3361 tgcagatcgc ggaaggtgcg gaccagtaac tccagtaccg cgtcaggcac tttatgcgga
     3421 ataccgctat gagccagcaa acgcgccgaa gcactggcga ccagttccag ctcctgggcg
     3481 aaatccataa tcggaaagac agtttcaaaa tcgaagcgac gctttagcgc agcactcatt
     3541 tcattgacgc cgcgatcgcg ggtattggca gtggcaataa tattaaagcc ttctcgcgca
     3601 tagagctgac tggcttcacc agtgagttcc ggcaccgtca tcaccctgtc agaaagcata
     3661 cctaacagac agtcttgcac ttccagcggt gtacgcgtta tctcttcaaa acggacgatt
     3721 ttgccgtcgc gcattccctg gtaaagcggg gcagggacca gcgcttccgt tgatggacca
     3781 tgattgataa gcagggcgta gttccagccg tacttgattt gatcttcggt agtagatgcg
     3841 ccgccctgga tggttaaccc ggcatcgccg ctaatagcgg ttgccagtaa ttcagacagg
     3901 agagattttg cggtgccagg ttcccccacc aacatcaaac cgcgtccggt ggcaagagtg
     3961 actaacatac gttcgacagc ggagggacta atcaccactt tacggctaat attttgcgcg
     4021 ctatcgccaa ggataaaagc acgggccgca ggcaaactta actgccaacc gggcgggcaa
     4081 ggtgcgttat cattttgttt taattttgcc agttcatcgg cgtataacac agcagcaggc
     4141 ggacgctgca gatgattatt ctgcggtgac atatattcat ccctgaaatg gattaatgaa
     4201 ataaacgata ttttacgcgc aataaatgtt tggcgcatta gttgtttgag cgaaaaatat
     4261 ctggaaagca gatcacagta aataaaaaaa cctgctggtg aggcaggttc ttttatttac
     4321 tactttcagg cctaacacca cagcctgtgc aacatcgtgt tccaacgaac gaattataac
     4381 cacggctgga ccccgttgca attaagataa tgagatttat aatccagacc gttgggacgt
     4441 tgcgccggat cgaatctatt tcaagtcctg gctaccggac gggtggtgct gcaggtggtg
     4501 ccctgatccg gagtgcaaca tcgtggtcca acatacgtaa accagtatcg acaggcagtg
     4561 taagggtaag gtgctggtgt tgcgctcctt aataaggaga gcggatggac acgctgacac
     4621 aaaagttaac cgtgctcatt gctgtactgg agctattagt ggctctgtta cggttgattg
     4681 atttgttgaa gtaacgggca acttgaaacg catctaaggg ggaatacag
//
LOCUS       DADMIB010000237         4673 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.240, whole genome shotgun sequence.
ACCESSION   DADMIB010000237 DADMIB010000000
VERSION     DADMIB010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4673
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.240"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            60..1859
                     /gene="cysJ"
                     /locus_tag="JNZ89_004138"
     CDS             60..1859
                     /gene="cysJ"
                     /locus_tag="JNZ89_004138"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     flavoprotein subunit"
                     /protein_id="HAY8937817.1"
                     /translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVL
                     NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK
                     FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
                     FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV
                     ATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
                     GVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
                     LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS
                     SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN
                     PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD
                     GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
                     LEVIAEFGGMDIEAADEFLSELRVERRYQRDVY"
     gene            1859..3571
                     /gene="cysI"
                     /locus_tag="JNZ89_004139"
     CDS             1859..3571
                     /gene="cysI"
                     /locus_tag="JNZ89_004139"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HAY8937818.1"
                     /translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
                     KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPHHAMLLRCRLPGGVITTKQWQAIDKF
                     AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
                     PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
                     TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
                     LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
                     RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
                     TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
                     LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
                     RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
                     DLWD"
     gene            3646..4380
                     /gene="cysH"
                     /locus_tag="JNZ89_004140"
     CDS             3646..4380
                     /gene="cysH"
                     /locus_tag="JNZ89_004140"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HAY8937819.1"
                     /translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL
                     PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
                     VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
                     SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
                     RKWEPGMSEEETRFFGLKRECGLHEG"
BASE COUNT         1153 a         1218 c         1334 g          968 t
ORIGIN      
        1 tgttttatgg gcgctgacag ggcgcagaaa cagctttgct tactggaaca taacgacgca
       61 tgacgacaca ggtcccacct tccgcgttgc ttccgttgaa cccggagcaa ctggcacgcc
      121 ttcaggcggc cacgaccgat ttaacgccta cccagcttgc ctgggtttct ggctatttct
      181 ggggcgtact caatcagcag cctgctgcgc ttgcagcgac gccagcgcca gccgcagaaa
      241 tgccgggtat aactattatc tccgcctcgc aaaccggcaa tgcgcgccgg gttgctgaag
      301 cattacgcga tgatttatta gcagcaaaac tgaacgttaa gctggtgaac gcgggcgact
      361 ataaattcaa acaaatcgcc agcgaaaaac tgctcatcgt agtgacgtca acgcaagggg
      421 aaggggaacc gccggaagaa gccgtcgcgc tgcataagtt cctgttctcc aaaaaagcgc
      481 caaagctgga aaacaccgcg tttgccgtgt ttagcctcgg cgatagctct tatgaatttt
      541 tctgccagtc cgggaaagat ttcgacagca agctggcgga actgggtggt gaacgcctgc
      601 tcgaccgtgt cgatgccgat gttgaatacc aggctgctgc cagcgagtgg cgcgcccgcg
      661 tggttgatgc gcttaaatcg cgtgcgcctg tcgcggcacc ttcgcaatcc gtcgctactg
      721 gcgcggtaaa tgaaatccac accagcccgt acagcaaaga cgcgccgctg gtggctagcc
      781 tctctgttaa ccagaaaatt accgggcgta actctgaaaa agacgttcgc catatcgaaa
      841 ttgacttagg tgactcgggc ctgcgttacc agccgggtga cgcgctgggc gtctggtatc
      901 agaacgatcc ggcactggtg aaagaacttg tcgaactgct gtggctgaaa ggcgatgaac
      961 ctgtcaccgt cgagggcaaa acgttgcctc tgaacgaagc gctacagtgg cacttcgaac
     1021 tgaccgtcaa caccgccaac attgttgaga attacgccac gcttacccgc agcgaaacac
     1081 tgctgccgct ggtgggcgat aaagcgaagt tacagcatta cgccgcgacg acgccgattg
     1141 tcgacatggt gcgtttctct ccggcgcaac tggatgccga agcgctgatt aatctgctgc
     1201 gcccgctgac cccgcgcctg tattccatcg cctcctcgca ggcggaagtc gagaacgaag
     1261 tacacgtcac cgttggtgtg gtgcgttacg acgtggaagg ccgagcccgt gccggtggtg
     1321 cctccagctt cctcgcggat cgcgtggaag aagagggcga agtccgcgta tttatcgaac
     1381 ataacgataa ctttcgcctg cccgctaacc cggaaacccc ggtgattatg attggcccag
     1441 gcaccggtat tgcgccgttc cgcgccttta tgcagcaacg cgccgccgac gaagcgccag
     1501 gtaaaaactg gctgttcttt ggtaatccgc actttacgga agacttcctg taccaggtgg
     1561 agtggcagcg ctacgtcaaa gatggcgtgc tgacacgtat cgatcttgcc tggtcgcgcg
     1621 accaaaaaga aaaagtttac gtacaagaca aactgcgcga acagggcgcg gagctgtggc
     1681 gctggatcaa tgatggtgcc cacatttatg tctgcggcga cgctaatcgc atggcgaaag
     1741 acgttgagca ggcacttctg gaagtgattg ccgaatttgg tggcatggac atcgaagcgg
     1801 cggatgaatt tttaagtgag ctgcgcgtag agcgccgtta tcagcgagat gtctactaat
     1861 gagcgaaaaa catccagggc ctttagtggt cgaaggaaaa ctgacagacg ccgagcgcat
     1921 gaagcttgaa agcaactacc tgcgcggcac cattgcggaa gatttaaacg acggtctgac
     1981 cggcggcttt aagggcgaca acttcctgct gatccgcttc cacggcatgt atcagcagga
     2041 tgaccgcgac atccgcgccg aacgtgctga acagaagctg gagccgcacc acgcgatgct
     2101 gcttcgctgt cgtctgccgg gtggggtgat taccactaaa cagtggcagg cgatcgacaa
     2161 atttgccggt gaaaacacca tctatggcag cattcgcctg accaaccgcc agacattcca
     2221 gttccacggc attctgaaaa agaacgtcaa accggtgcac cagatgctgc actcggtcgg
     2281 tcttgatgcg ctggcgacag ctaacgacat gaaccgtaac gtactctgca cctcgaaccc
     2341 ttacgagtcg cagctgcacg cggaagcgta cgagtgggcg aagaagattt ctgagcatct
     2401 gttgcctcgt acccgcgcgt atgcggagat ctggctcgac caggaaaaag tcgccactac
     2461 tgatgaagaa ccgatccttg gtcagaccta cctgccgcgt aagttcaaaa ccacggtagt
     2521 gatcccgccg cagaacgata tcgatctgca tgccaacgac atgaacttcg tggcaatcgc
     2581 cgaaaacggc aagctggtag gcttcaacct gctggtgggc ggtgggcttt ctatcgaaca
     2641 cggcaacaag aaaacctacg cccgcacggc gagcgagttt ggctatctgc cgctggagca
     2701 tacgctggcg gtggccgaag ctgtcgtgac aactcagcgt gactggggta accgaaccga
     2761 tcgtaaaaat gccaaaacca aatacacgct ggagcgcgtg ggggttgaga cgtttaaagc
     2821 ggaagtggag cgtcgcgcgg ggatcaaatt tgaaccgatc cgtccatatg agttcaccgg
     2881 acgaggcgat cgtattggct gggttaaggg cattgatgat aactggcacc tgacgctgtt
     2941 tatcgaaaat ggtcgcatcc ttgattatcc ggggcgtccg ctgaaaaccg gcctgctgga
     3001 gatcgcgaag atccacaaag gcgatttccg cattacggcg aaccagaatc tgatcatcgc
     3061 cggtgtaccg gaaagcgaga aagcgaagat cgagaagatc gccaaagaga gcgggttaat
     3121 gaatgccgtc acgccgcagc gtgaaaactc gatggcctgc gtgtcattcc cgacttgccc
     3181 gctggcgatg gcggaagcag agcgtttcct gccgtctttt atcgacaaca tcgataattt
     3241 aatggcgaaa catggtgtca gcgatgagca tatcgtgatg cgtgtaacag gctgcccgaa
     3301 cggttgtggt cgcgcgatgc tggcggaagt gggcctggtg ggtaaagcgc cgggtcgcta
     3361 caacctgcat cttggcggca accgcattgg gacacgtatc ccacggatgt ataaagaaaa
     3421 catcaccgag ccggaaatcc tggcgtcgct tgatgaactg atagggcgct gggcgaaaga
     3481 gcgcgaagcg ggtgaaggct tcggcgactt tacggtgcgt gcgggcatca ttcgcccggt
     3541 gctcgatccg gcgcgcgatt tgtgggatta accatcagcc cggtcttgta ggcctgataa
     3601 gaacgcgtga gcgtcgcatc aggcaaggca aacagtgagg aatctatgtc caaactcgat
     3661 ctaaacgccc tgaacgaact gccgaaggta gatcgcattc tggcgctggc ggaaactaac
     3721 gccgaactgg aaaaactgga cgctgaaggc cgcgtagcct gggcgctgga taatctgccc
     3781 ggtgaatatg tactttcttc cagctttggc attcaggcgg cggtgagcct gcatctggtg
     3841 aatcaaattc gcccggatat tccggtgatc ctcaccgata cgggttactt gttcccggaa
     3901 acctaccgct ttattgacga gttaacggac aaactcaagc tcaacctgaa agtgtaccgt
     3961 gctaccgaaa gcgcagcctg gcaggaagca cgctacggaa aactgtggga gcagggcgtt
     4021 gaaggcattg aaaagtacaa tgacatcaac aaagtcgaac cgatgaaccg ggctctgaaa
     4081 gaacttaacg cgcaaacctg gtttgctggc ctgcgccgtg aacaatccgg cagtcgcgcc
     4141 aatttaccgg tgctggcaat tcagcgtggc gtatttaaag tgctgccgat tatcgactgg
     4201 gataaccgaa ctatttatca gtacctgcaa aaacatggcc tgaaatatca cccattatgg
     4261 gatgaaggat atttatcggt cggtgatacc catacaaccc gtaaatggga acctggcatg
     4321 tcggaagaag aaacacgttt ctttggctta aaaagggaat gtggattgca cgaagggtaa
     4381 atattgccgg ataaattaaa cgcctctgtc agaaatgatg ggggcgtttt tattttgcga
     4441 gcagtattcc tgattttaaa cgtgaacgcc gctggaagaa ttatcaggta tagaatggcg
     4501 tcgggtgctt gaggctgtct ggcgttaagc attcgcgagg ttccagatgg acaaaagccc
     4561 caggcgatat ttctatcaac ctgaggccag cgttcgaacc caaacaattc gaatgttagt
     4621 ctcttctttg cagggaggca agacatgctg acaaaatatg cccttgtggc aat
//
LOCUS       DADMIB010000238         4666 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.241, whole genome shotgun sequence.
ACCESSION   DADMIB010000238 DADMIB010000000
VERSION     DADMIB010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4666
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.241"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..202)
                     /locus_tag="JNZ89_004141"
     CDS             complement(<1..202)
                     /locus_tag="JNZ89_004141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HAY8937820.1"
                     /translation="MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLG
                     ITCGVMVWAGIALLGLHLIIEKM"
     gene            complement(266..2095)
                     /gene="recQ"
                     /locus_tag="JNZ89_004142"
     CDS             complement(266..2095)
                     /gene="recQ"
                     /locus_tag="JNZ89_004142"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026263.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HAY8937821.1"
                     /translation="MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCL
                     VVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTRE
                     QQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRP
                     EYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLM
                     EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRA
                     DVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA
                     EAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEG
                     RQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDY
                     GHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSL
                     QLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEM
                     AEQMPITASEMLSVNGVGMCKLERFGKPFMALIRAHVDGDDEE"
     gene            complement(2228..3097)
                     /gene="pldA"
                     /locus_tag="JNZ89_004143"
     CDS             complement(2228..3097)
                     /gene="pldA"
                     /locus_tag="JNZ89_004143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HAY8937822.1"
                     /translation="MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQ
                     EHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGIL
                     GPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
                     NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLK
                     IGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQ
                     TRVGVGVMLNDLF"
     gene            3262..3735
                     /locus_tag="JNZ89_004144"
     CDS             3262..3735
                     /locus_tag="JNZ89_004144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001350877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HAY8937823.1"
                     /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAF
                     KNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
                     DLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATATYMVG"
     gene            3787..>4666
                     /gene="rarD"
                     /locus_tag="JNZ89_004145"
     CDS             3787..>4666
                     /gene="rarD"
                     /locus_tag="JNZ89_004145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HAY8937824.1"
                     /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
                     WSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA
                     SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFS
                     FAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMLLNLLLIA
                     AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI
                     WVALAIFVMDAIYTQRR"
BASE COUNT         1088 a         1228 c         1193 g         1157 t
ORIGIN      
        1 ccattttttc gataatcaaa tgcaggccaa gcaacgcaat ccctgcccaa accataacgc
       61 cgcaggtaat acccagcacg cccatcatcg cttctttacg ggaacgactg acagcggtct
      121 gagagacaaa aaagaaatcg ggaccggggc tcataagcgc cacaatgtgc accatggcga
      181 cggtgagaaa taacatcaac atacatttga ctcgcggggg aaacgtttac ggagtcttca
      241 tcctggcact tttttatgct gctgactact cttcgtcgtc gccatcgaca tgcgcacgaa
      301 tcagcgccat aaacggttta ccaaagcgtt ccagcttgca catcccaacg ccgttaacgc
      361 tgagcatttc gctggcggtg atcggcatct gttcagccat ctcaatcaag gttgcgtcgt
      421 taaacaccac gtacggcggg acattacttt catcggcaat cgatttacgc agtttgcgta
      481 atttggcgaa cagtttgcga tcatagttgc cgccgaacga tttctgcatc gctttcggtt
      541 tgagcgccac gatacgcggc acggcaagtt gcaaagagga ttcgccgcgc agcaccgggc
      601 gcgcggcctc tgtcagttgt agggcagaat gctgggcaat attttgcgtc accaggccga
      661 ggtgaatcag ctggcggatc acgctcaccc aatgttcatg gcttttatca cggcccatgc
      721 catagacttt cagtttgtca tgaccatagt cgcggatacg ctggttatta gcaccacgaa
      781 tcacttccac cacataaccc atcccaaacc gctgattcac acgaccaatg gtggaaaggg
      841 caatctgagc atcggttgaa ccgtcgtact gtttcggcgg atcgaggcag atatcgcagt
      901 tcccgcacgg ctcttgccgc ccttcgccaa aatagttcag caataccaga cgacggcaag
      961 tttgcgcttc ggcaaaagcg cccatcgcat tgagtttatg acgttcgata tcctgtaact
     1021 gcccctgcgg cttctcttcc aggcaacggc gcagccacgc catatcggcc ggatcgtaaa
     1081 acagcatcgc ttccgcgggc aggccatcac gcccggcgcg accggtttcc tgataatagg
     1141 attcgatatt gcgcggaata tcaaagtgga ccacgaagcg aacgtttggt ttattgatgc
     1201 ccatgccgaa cgccaccgtc gccaccacaa tttgcaggtc atcgcgctga aatttttcct
     1261 gcacgtcggc gcgaacatta ttttccagcc cagcatgata ggccgccgcg ctaattccct
     1321 tgctttgcag gcgcgcagcg gtgtcttcta ctttcgcgcg gctgttgcag tagataatgc
     1381 ctgacttacc gcgctgttcc tgcacgtagc gcatcaactg atcgagcggt ttgaacttct
     1441 ccatcagcat gtagcgaata ttcggacggt caaaactgct gatttgaatc agcggatcgt
     1501 tcagccccag caagcgcacg atatcctggc gcgtggtgtc gtcggctgtg gcagtcagcg
     1561 ccataaacgg cagggtcggg aaacgctggc gtaactgacc aagcgcggca tattccgggc
     1621 ggaaatcgtg gccccattgg gagatacagt gcgcttcatc aacggctaat aacaccggat
     1681 tccagtgcgc cagatgctca agaaagttat ccagcatcag gcgttccggg gcgatataaa
     1741 gcagacgaat ttgcccggtg cggcagcctg tcatcacttc aagttgctgc tcgcgggttt
     1801 gcgtcgagtt aaggcacgcc gccgccacgc cgttggcttg cagttgatcc acctgatctt
     1861 tcatcaacga aatcagcggt gaaacaacca cggtaaggcc gtttagcaat aaggcaggaa
     1921 tttgatagca aagggatttt ccgccaccgg tgggcatgac gaccaggcaa tcgcgaccgg
     1981 aaagcacagt gtcgataatt tcttcctggc cggggcgaaa ctgttggtag ccaaaggttt
     2041 cttgtaaaac ctgtttagct ccggactcca gattcaacac ttccgcctgc gccacattca
     2101 ccccgattgc ctgaaataaa aacaggcgct attttcagcg cctgcgcgag aaactgcaat
     2161 gcttttagtc tctgagaggg taatcctgga tgctgggttc cagatttgcc aaccactcaa
     2221 ccgttcatca aaacaagtcg tttagcataa ctcctacacc gacacgggtc tggttgaagt
     2281 tatagtcgat gagcgattcg ccatagccgc tgtaaacctg agtataaagg cgcacatgtt
     2341 tggtgatcgg gtaacttaag cctaactccg cgccgccgta accggtattc cagttgtact
     2401 gtcctttcgc actcaacacc gcatcaccga ggtgatagcc gattttaagc tggtagtaac
     2461 ccatatattt ggtgatatcc gggttatcgt cagtattacc caccacatac cacggcttca
     2521 cttctaccag ccagttaccg ttttctgcca tcaggcgagt ataaaggcgg ttccagctgc
     2581 gggaggtcgg gtcggaacgc ccgttagagt cgtggttata ccccatctcc acatcgcgca
     2641 gcgtccaacc tgcaaaacgg taatcggtgg caaaaccgag gaacaattgc ggttcgtagt
     2701 tggtttcacg aaacggtgaa gactcttcgc tattggacag ttgccaccag gatttttgcg
     2761 tataagacgc acccaacacc gagttcgggc ctaaaatccc acgccacagt ggaaatgcca
     2821 ggctcaactg aaactttact tcatccttac gcgcattttc cgcccagtcg taactggcaa
     2881 tcgcttcttt gttcagatcg ctggtttggg tgtagatgag gtagttggtg tcataaggat
     2941 agagcgtgaa cggattgtca tgctcctgca gcatattggc gataatactg ccacgcaccg
     3001 ctggcgcgtc atgcacctct ttcaccgttg cctcttgtgc atatactgcc ataggcaaca
     3061 taaacaccgg caacaaccag ccctgcagag tccgcatcgg tcgtgttctc cgtaacgaat
     3121 tattgataag gtgaatgttt ttctgcgggc tattttacat acttaactcc attgccgtta
     3181 gttatccctt cctaaagtag aaaccaacaa caaagaagca taaaatcaac atttcattaa
     3241 ccaatgaagt gtaaggatga tatgtctgcc gtactgaccg ctgaacaagc cctgaaatta
     3301 gtgggtgaga tgtttgttta tcacatgcca tttaaccgcg cgttagggat ggagctggag
     3361 cgttacgaaa aagagttcgc acagctggcc tttaaaaatc agccgatgat ggtgggtaac
     3421 tgggcgcaaa gcattttgca cggcggagtc attgcgtcgg cgctggatgt cgccgccggt
     3481 ctggtgtgcg tgggaagtac cttaacccgc cacgaaacca tcagtgaaga tgaactacgc
     3541 cagcggctat cgcggatggg gaccattgat cttcgcgttg attatctgcg cccaggcagg
     3601 ggcgagcgtt ttactgctac cagtagcctg ttgcgtgcag gcaataaagt cgccgtcgcc
     3661 cgcgttgaat tacacaatga agaacagctt tatattgcca gtgccaccgc caccgccacc
     3721 tatatggtag gttgaagaca taaaagcagg taaactgctg ttaccaatta aaaatgagta
     3781 ttcccgatgg atgcaaaaca aacgcggcag ggcgtattac tcgctcttgc cgcttatttt
     3841 atttggggta ttgcgccagc atacttcaag ctgatttact acgtgcccgc cgatgagatc
     3901 ctgacgcatc gcgtgatctg gtcgtttttc tttatggtgg tgctgatgag catttgccgc
     3961 cagtggtcct atttaaaaac gctgattcag acgccacaga aaatttttat gctggcagtc
     4021 tctgccgtgc tgattggtgg caactggcta ctgtttatct gggcggtgaa caatcaccat
     4081 atgctggaag cgagccttgg ttactttatt aacccgctgg tgaacattgt gctggggatg
     4141 attttcctcg gcgagcgatt ccgccggatg caatggctgg cggtgattct ggcgatatgt
     4201 ggcgtgttgg ttcagttgtg gacttttggt tcgctgccaa tcatcgcgct ggggctggcg
     4261 tttagttttg ccttctacgg actggtacgc aagaaaattg ccgttgaagc gcaaaccggc
     4321 atgttaatcg aaaccatgtg gctgctgccc gtggcggcga tttatctgtt tgctattgcc
     4381 gacagctcaa ccagccatat ggggcaaaac ccgatgttgc tgaatttgct gctgatcgcc
     4441 gccggtattg tcaccaccgt accgctgttg tgttttaccg cagctgctac acgcctgcgt
     4501 ctctccacgt taggcttctt ccagtatatt ggcccgacgc tgatgttcct gttggcagtg
     4561 acgttttatg gtgaaaaacc gggtgccgat aagatggtga ccttcgcctt tatttgggtg
     4621 gcgctggcaa tttttgtgat ggatgcgatt tatacgcagc gtagaa
//
LOCUS       DADMIB010000239         4662 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.242, whole genome shotgun sequence.
ACCESSION   DADMIB010000239 DADMIB010000000
VERSION     DADMIB010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4662
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.242"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..755)
                     /locus_tag="JNZ89_004146"
     CDS             complement(<1..755)
                     /locus_tag="JNZ89_004146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic diguanylate phosphodiesterase"
                     /protein_id="HAY8937825.1"
                     /translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ
                     RVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLV
                     QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN
                     AGVMEMINIDLLTAMLLEPQLQQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS
                     SQRFPFTINVNGPGATALAWHYLPTQLPLAVLL"
     gene            complement(886..2250)
                     /locus_tag="JNZ89_004147"
     CDS             complement(886..2250)
                     /locus_tag="JNZ89_004147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine dehydratase 1"
                     /protein_id="HAY8937826.1"
                     /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTR
                     VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGR
                     HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD
                     AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA
                     CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA
                     AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC
                     IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK
                     VQCD"
     gene            complement(2434..3012)
                     /locus_tag="JNZ89_004148"
     CDS             complement(2434..3012)
                     /locus_tag="JNZ89_004148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HAY8937827.1"
                     /translation="MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQP
                     GLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLP
                     PVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
                     HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP"
     gene            complement(3016..4377)
                     /gene="pabB"
                     /locus_tag="JNZ89_004149"
     CDS             complement(3016..4377)
                     /gene="pabB"
                     /locus_tag="JNZ89_004149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 1"
                     /protein_id="HAY8937828.1"
                     /translation="MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS
                     RFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF
                     QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV
                     NARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRF
                     HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT
                     LPRLPDPQEDSKQAEKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF
                     PAVHHLVSTITARLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG
                     SIGYLSFCGNMDTSITIRTLTAINGQIYCSAGGGIVADSQEEAEYQETFDKVTKILRQ
                     LEK"
     gene            4451..4630
                     /locus_tag="JNZ89_004150"
     CDS             4451..4630
                     /locus_tag="JNZ89_004150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HAY8937829.1"
                     /translation="MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN
                     HSGERIVARFEDEDE"
BASE COUNT         1170 a         1199 c         1212 g         1081 t
ORIGIN      
        1 cttagcagca ccgccagcgg taattgtgtt ggaagatagt gccatgccag cgccgtagcc
       61 cccggaccat taacgttaat ggtaaaagga aagcgttgcg aagaaacctg atagttttca
      121 ttgtcttcag gttgcggaag ggaatctacc agcccattac catagagcaa atgccgtttg
      181 tccaccgtca ggctggcgct actgatttgc tgcagttgtg gctcaaggag cattgccgtc
      241 agtaagtcga tgttaatcat ctccatgacc ccagcattgc tactgcccgc tgcaggcgtc
      301 cattgaatca aaaccggact gcctttaatc agggcacggt cgatcgtcag gcgtaaaagt
      361 ggttgcggtg caggaagttc agccagaatg tccacgacgg gcacattgcg ataaccaaaa
      421 atgctggagc aatagagtgt gccgtcttgc accaggccaa tggatcgcac agtttggagt
      481 tttgccgcct gtttacgtaa tggcaaatgg gcgacagagc agggcagacc aatcagcgga
      541 agcaagactt cgctacctgc ctgtagggga agcagtactt tatctaattc ctctacagcg
      601 tgattggcga attgtactac ccgttgttga tttaagttac gctgtgaaat aaatcgcacg
      661 ctcagggtcg aagcgagcgt aacgagtgcg caaatcgtac aaacaatcat tcgattacgt
      721 cgataggttt taatgatccg ttgtgctttt tgcatgcggg ccaccctgta agcgtatggc
      781 gacaaacgcc tgacgcaaca gtggatgtgt agtggggaat attacagcag acgagaaagc
      841 gggtataaat tcgcccatcc gttgcagatg ggcgagtaag aagtattagt cacactggac
      901 tttgattgcc agaccaccgc gtgaggtttc gcggtatttg gcgttcatgt ccttaccggt
      961 ttcgtacatc gtttcgatga ccttatccag cgagacgcgc ggtgcactgg tgcggcgcag
     1021 agccatccgt gcggcgttaa tcgccttcac agaggcaatg gcattacgct caatgcacgg
     1081 cacctgaacc tgccctgcaa ccgggtcgca ggttaaacca aggttgtgtt ccatgccaat
     1141 ttccgccgcc acgcaaacct gttccgggct accgcccagc agttctgcaa gacccgcagc
     1201 agccattgaa caggcaacac ccacttcgcc ctggcaacca acttccgcac cggaaataga
     1261 ggcgttcatt ttatacaatg caccaatcgc gcccgctgcc ataaagtaac gggtatagat
     1321 gtccgggctg accgattcaa taaagtggtc atagtaagcc agcactgccg gaacgatacc
     1381 gcaggcaccg ttggttggcg cagttaccac acgaccaccg gcggcgtttt cttcgttaac
     1441 tgccagcgca aacatgttta cccagtcaat gacattcatc ggatcgttag acagtttatc
     1501 gctggaaacc agcatccggc gcagggcaga cgcacgacgt ggcacgcgca gcgggcctgg
     1561 cagtacacct tcggtgttca tcccgcgatc gatacatgcc tgcatggttt gccagacatg
     1621 cgcgaaatac tcgtcgatct ctttcttgct gtgcagcgcc agttcgttct gcatagcgag
     1681 accagacagc gaatagccgg tttcattaca gtacgcgagc agttcggtgg cagatttgaa
     1741 cggatacggc acgctcactt cgttggcagc atcctgacca aagtgttctt catcgacgat
     1801 aaaaccgccg ccgatggaat aataagtttt gctgtagacg acttcatcgc cgttataggc
     1861 gtggatttgc ataccgtttt catgcagcgg caggttgccg ttatgaaaac gcatcccgtt
     1921 gtcgcgcggg aaatccactt catgccgtcc ctgtgccagc agcagacgtt cgcgctcttc
     1981 tacgtcgcga ataaaaccgg gaatactgtc gatatccacg gtggcaggtt cgttacctgc
     2041 aagacccata ataatggcga tatcggtgtg gtggccttta cccgtcagcg acagtgaacc
     2101 ataaacgtcc acggcaacgc gagtaacgct atccagtaag cctttttcga ccagatcatc
     2161 gacgaactgt ttacccgcct tcataggccc tacggtatgg gaagatgagg gaccaatccc
     2221 caccttaaac atgtcgaata gactaatcac gataatactc ctgacaaggt gactggactt
     2281 ccagtaacga actaataaca gcgcatagtg taagagggaa cgcggcgact ggcttaacta
     2341 ttcacatgaa ttaaactaat caaaaaccgc gatttaacta atattgcgat gattgtctca
     2401 agtagtgttt tgtagatgta aagataagta tagtcagggt ttcacaccaa tttgcagcgc
     2461 cagctcacga attatgcctg cggtcattcc ccatacaaaa tactgttcgt accaggacag
     2521 ccatacccga tgtgaatcgc cacggcggta gatatctaaa gggtgataac gacccagatg
     2581 taatgcctgg gcgagcggca tttcaaacac cgccgagact tcatcttcac tggcgcgata
     2641 cggcagatcg ggcgggataa tgccgatcac tggggttacc tgatagccag ttacgctatc
     2701 gacgggcggc agcacgccga taacttcaac ggcggaaggc ggtatagcga cctcttcttc
     2761 agcttcgcgc agcgcggcgg cgataactga tgcgtccgtg tcatcgactg cacctccagg
     2821 gaatgccact tgtccagcgt gtttacgcag atgaattgaa cgctgagtca gcaacaaccc
     2881 cggttgcggt cgacggacga tggggattaa cacggcagcc tgacgatgat ttagggtttc
     2941 ccggttaatt tgcgggcgca aaagttgaaa gcgagataaa aaatcatcaa gcgtcaggct
     3001 acggtattcc acgtcttact tctccagttg gcgtaatatc ttagtaactt tatcaaaagt
     3061 ttcctgatat tccgcttctt cctggctatc ggcgacaatt ccaccgcccg cagagcagta
     3121 tatttgtccg ttaatggcag tcagcgtgcg gatagtaatg ctggtatcca tgttgccgca
     3181 aaagctcaaa tagccaatgc tgccgcacca ggcattacgt cgctgcggtt ccagttcgtc
     3241 gataatttcc atagcccgta ctttcggagc cccggttatt gagccaccag gaaaagctgc
     3301 gcgcagcaga tcgctggcgt gtaactgttc tggtagtcgc gccgttatag tgctgaccag
     3361 atgatgcacg gcagggaagg gttccaccac gaagagctct ggtactttta ccgaaccggc
     3421 tacggcaaca cgaccgatat cattacgcat taaatcgaca atcatcagat tttcggcacg
     3481 atctttcgct gagttcgcca gtttttctgc ttgtttgcta tcttcctgag gatcgggcag
     3541 gcgtggtagc gtgcctttaa tcgggcgggt ctggatttca ctattatcac aaagaataaa
     3601 ccgctctggc gaaaggctta aaattgcacc ctgttcaaga cgtaaaaaag cgctaaatgg
     3661 cgcgcggttg gcctgattaa gctgaaggaa tgcctgccat tcatcgccag aataggtcgc
     3721 atgaaaacgc tgggcgagat tcacctgata gcaatcaccg ctgtgcagat attcctgtac
     3781 ctggcgaaat ttttcgccgt actgctcgcg ggtcatattg gattgccagt cggaagtgag
     3841 cgtgaaatct tcctgcggcg agaattgctg gctttccagc caggcccgac gggcattgac
     3901 atcattatga ctcagcaaag aaactgtatg acgctggtgg tcgacaatga gcgcccaatc
     3961 gtagataccc actgccatat ccggcagaac gatatcttgt tccgcaattt ctggcagtga
     4021 ctcaaaacgg cggcccagat cgtagccaaa caaccccagt gcgccgccct gaaatggcaa
     4081 atcttcgtta tgcgttgggc gaatgtctgc gcgatccagc acctgctgga gcacctgtag
     4141 cgggtcatca gtggtcgttg tgcgtttttc gctttcacta acaacggttt ctttaccgaa
     4201 agtggttaaa gtgcaaatcg gctcggcgac cacaatatca aagcggctat acggatgatc
     4261 ggcatagccg gagtgtaaaa gcatcgccca cggcaggtgg cttaagcggg agaaataaaa
     4321 ttcagcggcg tcctgacgcc agggtaaagt aatcacagcg ggagataacg tcttcatcag
     4381 tcctgactct actggctatg tgccgggtag catgaaataa ttagcgccaa caatttagca
     4441 ggagttaaca atgtttgcag gtttaccttc actcacccat gaacagcagc aaaaagctgt
     4501 cgagcggatc caggaactga tggcacaagg gatgagcagc ggccaggcaa tcgcgctggt
     4561 ggcagaagag ctgcgtgcca accactccgg cgagcgaatc gtggcgcgtt ttgaggatga
     4621 agacgagtaa cacactaatc cgtatcgatt tcgttataga ag
//
LOCUS       DADMIB010000240         4599 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.243, whole genome shotgun sequence.
ACCESSION   DADMIB010000240 DADMIB010000000
VERSION     DADMIB010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4599
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.243"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..108
                     /locus_tag="JNZ89_004151"
     CDS             <1..108
                     /locus_tag="JNZ89_004151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'') family aminoglycoside
                     nucleotidyltransferase"
                     /protein_id="HAY8937830.1"
                     /translation="QAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            278..610
                     /gene="qac"
                     /locus_tag="JNZ89_004152"
     CDS             278..610
                     /gene="qac"
                     /locus_tag="JNZ89_004152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015059047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacL"
                     /protein_id="HAY8937831.1"
                     /translation="MKNWLFLAIAIFGEVVATSALKSSHGFTKLVPSVVVVAGYGLAF
                     YFLSLALKSIPVGIAYAVWAGLGIVLVAAIAWIFHGQKLDLWAFVGMGLIVSGVAVLN
                     LLSKVSAH"
     gene            complement(875..1510)
                     /locus_tag="JNZ89_004153"
                     /pseudo
     CDS             complement(875..1510)
                     /locus_tag="JNZ89_004153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014455198.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
     gene            1512..1787
                     /locus_tag="JNZ89_004154"
     CDS             1512..1787
                     /locus_tag="JNZ89_004154"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937832.1"
                     /translation="MNIGLFGFTNKHYYLATKTQEKYTKPFGSDGSLSPLDYSVGIGT
                     GLELGHFQFMFGYDYPLSNSSKDPDLSQVRQHNFRASIAYSFRKLKK"
     gene            complement(1790..2581)
                     /gene="sul3"
                     /locus_tag="JNZ89_004155"
     CDS             complement(1790..2581)
                     /gene="sul3"
                     /locus_tag="JNZ89_004155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul3"
                     /protein_id="HAY8937833.1"
                     /translation="MSKIFGIVNITTDSFSDGGLYLDTDKAIEHALHLVEDGADVIDL
                     GAASSNPDTTEVGVVEEIKRLKPVIKALKEKGISISVDTFKPEVQSFCIEQKVDFIND
                     IQGFPYPEIYSGLAKSDCKLVLMHSVQRIGAATKVETNPEEVFTSMMEFFKERIAALV
                     EAGVKRERIILDPGMGFFLGSNPETSILVLKRFPEIQEAFNLQVMIAVSRKSFLGKIT
                     GTDVKSRLAPTLAAEMYAYKKGADYLRTHDVKSLSDALKISKALG"
     gene            complement(3050..3295)
                     /locus_tag="JNZ89_004156"
     CDS             complement(3050..3295)
                     /locus_tag="JNZ89_004156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001354008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrpB family protein"
                     /protein_id="HAY8937834.1"
                     /translation="MKIEIMEYNPDWTKNFEEEKIKLLHFFGSHAVAIEHIGSTAIPN
                     QRAKPVIDIFIGVSPFAELPFISAFLMQRSITTLRQI"
     gene            complement(3333..4196)
                     /locus_tag="JNZ89_004157"
     CDS             complement(3333..4196)
                     /locus_tag="JNZ89_004157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000612791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8937835.1"
                     /translation="MIPNSENKRVWFITGASKGLGYAFTCAALKAGDKVVAVARTIDN
                     LAKLEETYQESLLPLNLDVTDREAVFSTVETAVKHFGRLDIVVNNAGIMTMGMIEELN
                     ESDARKLMDTNFFGALWVCQAVMPYLRSQRSGHIIQITSIGAIISGPMSGIYSASKFA
                     LEGMSEALAKEAEHFGVKLTMVEPGGYWTDLYTSMSYSNPLDSYGTLRDELAKQYSED
                     SVDSDPSLAAEALMKLVASNNPPLRLILGSMVYDLAMDTLKARMATWEEWEAVSRASE
                     KAIPAPERYGV"
     gene            complement(4342..4581)
                     /locus_tag="JNZ89_004158"
     CDS             complement(4342..4581)
                     /locus_tag="JNZ89_004158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011264039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8937836.1"
                     /translation="MAYVQESIAPEMMGKVFSLLMTAMTLSMPIGLLVAGPVVEVIGV
                     NTWFFWSGVALIVNAVLCRILTRRYDKVTMKPQVD"
BASE COUNT         1273 a         1110 c          902 g         1314 t
ORIGIN      
        1 caggcttatc ttggacaaga agaagatcgc ttggcctcgc gcgcagatca gttggaagaa
       61 tttgttcact acgtgaaagg cgagatcacc aaggtagtcg gcaaataatg tctaacaatt
      121 cgttcaagcc gacgccgctt cgcggcgcgg cttaactcaa gcgttagatg ccagatttgg
      181 cgttgcgtat gctcacagaa aatcgacagc cgcaagactg tttttggcaa ctcatagcca
      241 ccactattta tccttcatac cgtagaggag attgcacgtg aagaactggc tctttctggc
      301 tattgcaata tttggtgagg tcgtcgcaac ttccgcactg aagtccagcc atggattcac
      361 caagttagtt ccttctgttg tagttgtggc tggctacggg cttgcgttct atttcctctc
      421 tctcgcactc aagtccatcc cggtcggcat tgcttatgct gtttgggctg gcctcggcat
      481 cgtacttgtg gcagctatcg cttggatctt ccatggccag aaactagact tgtgggcgtt
      541 cgttggcatg ggacttatcg ttagtggcgt cgccgttcta aatctgctat ccaaggtcag
      601 cgcacattga tcgggctggc atctaacagt tcattcaagc cgacgccgct tcgcggcgcg
      661 gcttaattca ggtgttagtc ggacgcctac ggcgccgagg aaaaaagaaa ccaaaccatt
      721 cttgctgcca aagagaaaaa ccccttacgg tggcgtactg ggaaagtgcg tatctacgac
      781 gccttgccgg tctcaatgtc atgccgtcct ctttcgaagg ctgcttgatg caaacctctc
      841 aaaaatctgg cataaactat cttgacatat tccgattgaa caccttccga atatcagcgg
      901 ctatcagcgg gatctcatct tttttcgtga cgtaggagtg ggcattctgc tgcagatgaa
      961 actggcagcg ttgccacaga attccaggga agacagcatc gattgccgcg cgcagtcctg
     1021 agtggtcatc actggtgatc attcgcaggc cgtgcatccc tcgtcgtacg agaccctcga
     1081 gaaaggaacg ccagtttacc tctgcctcac tgttcgcgac ttcggcgtca agaatatgcc
     1141 gattcccgct gtaatcaacg ccaatagcca ctagaagcgc ctgcttgacc acatgggaac
     1201 cgacgcgaac cgattcatag gtcgcatcaa gtaccaagta ttgaatctgt ccgacaggct
     1261 gcgccttcca agacgtaatc tcttcatcga gctcctttgc cagcctgctg acctgggacg
     1321 agctgacttc ggtgccacaa agaatttcga cgatatccga gaccctgcgg gtacttactc
     1381 ctttgacata catttcggcg atggcgagct tgagagcacg ctcactgcgc atgcctttct
     1441 cgatgcagct gggataaaac tccatcccgc gaacttgtgg tactttcaag aggactttcc
     1501 cggtcgcaag attgaatatt ggattatttg gatttaccaa caaacactac tatttagcta
     1561 cgaaaactca agagaagtac acaaaacctt ttggaagtga tggaagttta agtcctcttg
     1621 attatagtgt aggtattgga acaggtttag aattaggaca tttccagttt atgtttggct
     1681 atgattaccc tcttagtaac agttcgaaag atccagacct aagtcaagta cgccaacaca
     1741 acttcagagc aagtatagca tattcattta gaaagctaaa aaaataaaac taacctaggg
     1801 ctttggatat tttcaaggca tctgataaag acttaacatc atgggtgcgg agataatctg
     1861 cacctttttt gtatgcatac atttctgctg caagagttgg tgctaaacga gatttcacat
     1921 cggttccagt tattttacct aagaatgatt tccgtgacac tgcaatcatt acttgcaaat
     1981 taaaagcttc ttgaatttca gggaaacgct tcaaaacaag aatagatgtt tctggattag
     2041 agcctaaaaa gaagcccata cccggatcaa gaataattcg ttcacgcttt acaccagcct
     2101 caactaaagc agcaattctt tctttaaaaa attccatcat ggaagtaaaa acctcttccg
     2161 gattcgtttc aactttagta gctgcaccaa ttcgctgaac ggagtgcatc aacacaagtt
     2221 tgcaatctga ctttgccaag cctgaataaa tctcaggata aggaaaacct tgaatatcat
     2281 taataaaatc aaccttttgt tctatgcaaa aactctgaac ctcaggttta aatgtatcaa
     2341 cagaaataga aatgcctttt tcttttaaag ccttaatgac aggtttgagt cttttgattt
     2401 cttccacaac gcccacttca gttgtatcag gattactgga agcggctccc aaatcaatca
     2461 catctgctcc atcttcaacc aaatgcagag catgctcaat tgccttatct gtatctaaat
     2521 aaagtcctcc atcggaaaaa ctatcggtgg ttatatttac gattccaaaa atcttgctca
     2581 tatcattttg ctttgattac aaaagtagca tttatcttaa ttgactaatt atcacttacg
     2641 caaattgaca cattttccct atctttgcag cctaattttt ttgttttaat tcattatgaa
     2701 aactgatagg aactgtcatt tcgagttttt cgcggttttg ggtcaaaatt cggttttttc
     2761 cccgaactac gactgttttc gcaccccgaa caactaatcc aatcagaatt ttccggcaac
     2821 gccgactcca agaagtgtaa ttccagtcta tttctgccgt caacccctga ttcgcgttaa
     2881 tgcgacaaag ctcaaacaca taactccccc acgaagccat ataaactccg atttcgaggt
     2941 gttatcctgt tccgcataaa cttcgttttt gggtattata cctacaccaa agcaagaaga
     3001 ttatgggtcc aaacttcatt tgtatatttt gcaaacaaat atctgcctgt catatctgtc
     3061 ggagtgtggt gatactcctt tgcattaaaa atgcgctgat aaaaggtagt tcagcaaaag
     3121 gcgaaacgcc aataaatata tctataaccg gtttcgcccg ttgattgggt atcgccgtgc
     3181 ttccgatatg ttcaatggct acggcatgag aaccgaaaaa atggagcaat tttattttct
     3241 cttcttcaaa attctttgtc caatccgggt tatattccat aatttcaatt ttcatgatag
     3301 tttcgtcctt gcctcaaaaa ccatgtttgg tattatactc catatctctc cggtgcagga
     3361 atagcctttt ctgatgcacg gctaacagct tcccattctt cccaggtagc catccgtgct
     3421 tttaaggtat ccatcgccaa atcgtatacc atgctgccaa ggataagcct caaaggcgga
     3481 ttattgctgg ctactaattt cataagggct tccgctgcca aggaaggatc actatcgacc
     3541 gaatcttcgg aatactgttt cgccagctca tcgcgcagtg taccgtatga atctaatgga
     3601 ttgctgtaac tcatcgaagt gtataaatct gtccaatatc ctcctggttc caccatagtg
     3661 agtttcactc cgaaatgttc cgcttctttt gctaaggctt cactcattcc ttccagcgca
     3721 aatttacttg cactgtaaat accagacatc ggacccgaga taatagcgcc aatgcttgta
     3781 atctgtatga tatgtccaga acgctgcgac ctcaaatagg gcatcactgc ctgacaaacc
     3841 caaagagctc caaaaaagtt tgtgtccatt agtttccgag catcggattc gtttagttct
     3901 tcaatcatac ccatagtcat gatacccgca ttattaacaa caatatcaag cctaccgaaa
     3961 tgtttaactg ctgtttcaac cgtagaaaaa acagcctccc tatctgtaac atcgaggttt
     4021 aatggcagta agctctcttg atatgtttct tctagcttcg ccaaattatc gatagtcctt
     4081 gcaactgcaa caactttatc cccggctttc aaggcggcgc atgtaaaagc atagccaagc
     4141 cccttgcttg ctccggtaat aaaccatact cttttatttt cgctattagg tatcatagat
     4201 attctccttt aggctattat agaaagatta ttataagcga aattaatacc gttaaacgcc
     4261 atgagcccga caattttgag cactttgttt tgtactccca gaagctcacc actacaaatt
     4321 atcatcaacc cggtcctttt ttcagtccac ttgcggtttc attgttactt tgtcatagcg
     4381 tcgtgtcaga atgcggcaga gaacagcgtt tactatcaac gcaacaccag accagaaaaa
     4441 ccatgtatta acacctataa cctcaacaac cggacctgca acaagtaagc ctatcggcat
     4501 agaaagagtc atggcggtca tcaaaaggga aaacaccttg cccatcattt caggggcaat
     4561 gctttcttga acataagcca taacaggaac attcataaa
//
LOCUS       DADMIB010000241         4585 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.244, whole genome shotgun sequence.
ACCESSION   DADMIB010000241 DADMIB010000000
VERSION     DADMIB010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4585
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.244"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            250..615
                     /gene="queD"
                     /locus_tag="JNZ89_004159"
     CDS             250..615
                     /gene="queD"
                     /locus_tag="JNZ89_004159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HAY8937837.1"
                     /translation="MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGE
                     VDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPL
                     LSAVMVKETCTAGCIYRGE"
     gene            693..1961
                     /locus_tag="JNZ89_004160"
     CDS             693..1961
                     /locus_tag="JNZ89_004160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY8937838.1"
                     /translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL
                     SGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRA
                     RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVL
                     AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGA
                     FLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVP
                     EGGLHSMPVQYAGNGWQLVGDALRSCVNTGISVRGMGMALTGAQAAQTLISACQHREP
                     QNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRAWPALMQDISRDLWDQGDKPV
                     PPLRQLFWRHLRRHGLWHLAGDVIRSLRCL"
     gene            1952..2212
                     /locus_tag="JNZ89_004161"
     CDS             1952..2212
                     /locus_tag="JNZ89_004161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HAY8937839.1"
                     /translation="MSVAHNLWRVADAPHIVPADSVERQMVQWLINACPAGLFSLTPE
                     GDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFSITYRFG"
     gene            2229..2804
                     /locus_tag="JNZ89_004162"
     CDS             2229..2804
                     /locus_tag="JNZ89_004162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HAY8937840.1"
                     /translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS
                     NIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF
                     FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
                     DEEDACNAINAGVVALSTTNTGVWTLAKKLL"
     gene            complement(2952..3812)
                     /locus_tag="JNZ89_004163"
     CDS             complement(2952..3812)
                     /locus_tag="JNZ89_004163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HAY8937841.1"
                     /translation="MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQV
                     LDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHW
                     GNALTATLQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPDWLVSTEDLKNV
                     TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISG
                     HLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEA
                     LVTNIHADCQ"
     gene            complement(3809..>4585)
                     /locus_tag="JNZ89_004164"
     CDS             complement(3809..>4585)
                     /locus_tag="JNZ89_004164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HAY8937842.1"
                     /translation="NILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQ
                     AAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEF
                     VARHIAEWQHQNPLDLIITGSQSSEGQNGQTPFLLAEMLGWTCFTQVERFTLDALFIT
                     LEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAM
                     QCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP"
BASE COUNT         1054 a         1234 c         1165 g         1132 t
ORIGIN      
        1 agataaggtt aacggggtga acggtgtgga ttaaagacgg gatagcgata actaataacc
       61 aaatcgacta acctgtttta gcaatagtct ttaacaacaa aatagattaa ccaacccaat
      121 gaaaaacaaa tgaatttagc caatcattaa gataaatcag cgattttgcg caacaaagtc
      181 gttttagata atgcgaaaaa acagcctttc cggtactcta cggcggtttt atcgtcctgt
      241 agagaaatta tgatgtccac cacgttattt aaagatttca ccttcgaagc cgctcaccgc
      301 ttaccacacg tcccggaagg gcataaatgt ggtcgcctgc acgggcattc ctttatggtg
      361 cgactggaaa ttaccgggga agtcgatccg catacgggct ggattatcga tttcgctgaa
      421 ctaaaagcgg cgtttaagcc aacttatgag cgcctcgatc accattatct caatgatatt
      481 ccaggtctgg aaaacccaac tagcgaagtt ttagcaaaat ggatttggga tcaggttaaa
      541 cccgttgtgc cgctgttaag tgcggtgatg gtaaaagaaa cctgcaccgc tggttgtatc
      601 tatcgcggcg aatgataaga gtgtgtcggc ggtcaatttc ccttaagtaa cgctatgtta
      661 gggtattgtg ttcaggatat ctggggcatg acatggaaga cgactgcgac attattatta
      721 ttggtgccgg tattgcaggc accgcttgcg cgttacgctg cgcgcgagcg ggtttatccg
      781 ttttgttact ggaacgcgct gaaatccccg gcagcaaaaa tctttccggc ggacggttat
      841 atacccatgc actcgcggaa ctcctccctc agtttcatct gaccgcgcct cttgaacgac
      901 gcatcactca cgaaagcctt tccctgttaa cgcccgatgg cgtaacgacg ttttccagct
      961 tacagcccgg cggtgaatcc tggagtgtat tacgtgcacg gttcgatccg tggctggttg
     1021 ccgaagccga aaaagaaggt gtcgaatgta tccccggagc gacggtggat gcactgtatg
     1081 aagaaaacgg cagagtctgt ggcgttattt gtggtgacga tattctccgc gcccgttatg
     1141 tggtgctggc agaaggtgcc aacagcgtcc tggctgaacg tcacgggtta gtgactcgtc
     1201 ctgctggcga agcgatggcg ttggggatca aagaagtgct gtcgctggaa acatccgcta
     1261 ttgaagaacg ttttcatctg gagaataacg aaggcgcagc gttgctgttc agcggcggaa
     1321 tctgtgatga cttacccggc ggcgcatttc tttatactaa tcaacaaacg ctctcgttag
     1381 ggattgtttg cccgctctct tcccttacgc aaagtcgtgt tccggcaagc gagctgctga
     1441 ctcgctttaa agcgcatccg gcagtgcgcc cgcttatcaa aaacacggaa tcactggagt
     1501 atggtgcgca tctggtgcca gaaggtggct tgcacagtat gccggtgcaa tacgccggta
     1561 acggctggca gctggtgggc gatgcgttgc gcagttgcgt caataccgga atttccgtgc
     1621 gcggcatggg tatggcgctg actggcgcgc aggcggcaca aacgctgata agcgcctgcc
     1681 agcaccgcga gccgcaaaat ctgtttgcgc tttatcatca caacgtagag cgcagcctgc
     1741 tatgggatgt tctacaacgt tatcagcatg ttccggcgct tttgcaacgc cctggctggt
     1801 atcgggcgtg gcctgcgtta atgcaggata tttcccgcga tttatgggat cagggtgata
     1861 aacctgttcc accgctgcgc cagttattct ggcgtcattt acgtcgtcat ggcctgtggc
     1921 atctggcggg cgatgttatc aggagtctgc gatgtctgta gcccataatc tctggcgcgt
     1981 tgctgatgcg ccgcacattg ttccggctga ctccgttgag cgtcagatgg tacaatggtt
     2041 gattaacgcc tgtccggcag gtcttttttc gctcacaccg gaaggtgact tacgcgttga
     2101 ttatcacggc tgcctggagt gtggcacctg ccgtttgctg tgcgacgaat ccacactaca
     2161 acagtggcgc tatccgcctt ccggattcag catcacctac cgctttggat aaataataag
     2221 gataatttat gcccctctta cacctgctcc gccagaatcc ggtgattgct gccgttaaag
     2281 ataatgccag cctgcaactg gcaatcgact ctgaatgcca gtttatttcc gtgttgtacg
     2341 gcaatatctg caccatcagt aatatcgtta aaaagattaa gaacgccggg aaatatgctt
     2401 ttattcatgt tgatttgctg gaaggcgcgt caaataaaga agtcgtgatt cagtttttga
     2461 aactggtgac cgaggcggac ggcattatca gtaccaaagc ctcaatgttg aaagcggcaa
     2521 gagcggaagg ttttttctgt attcatcgcc tgtttattgt tgattcaatt tcgtttcaca
     2581 acattgataa gcaagttgcg caatcgaatc cggattgtat tgagatcctg ccaggctgta
     2641 tgcccaaagt gctgggctgg gtgacagaga aaatccgcca accgctgatt gccggtgggc
     2701 tggtgtgcga tgaagaagat gcgtgtaatg cgattaacgc gggtgtcgtg gcgctttcca
     2761 ccacgaatac cggggtctgg acgttagcga aaaaattact ttgacgggat aatcgtaacc
     2821 aattgaattt ggtttgattt gtaggccgca cgccacatcc gacattcagc gcctgatgcg
     2881 acgcttgacg cgtcttatca ggcctacaag tccccaggcc agaaccgtag gcaggatcat
     2941 ccggcaacac attattggca atctgcgtga atgtttgtca ccagtgcctc cagcaccact
     3001 ttccagtcat caaccacgcc aacatctgcc tgtgaaaata ccgcagcgct ggcgtcatga
     3061 ttaatcgcca ccacaaactt gctattgcgt acgcccgcca ttaacgctgc tgcgccggaa
     3121 gcgccaacaa caatacacac ctcaggtgcc agcaaatgtc cggaaatacc aatcactttt
     3181 tcagcatcaa cgccaccgtt catcactcgc gcccgactgt agcccacttc ggctcccagc
     3241 ttttctgcca gcatagcgat ttcctggtta tctgcctctc cgccctgccc caccaccagc
     3301 acccgtctgg cctcagctaa tgggtcgcga gtaacatttt tcagatcctc tgtgctaacc
     3361 agccagtcgg gaagcgcacc cgggacaatg ttcagttgtt gtattccaga gggcaacgtg
     3421 gcgtttttcg ctgctcccgc ctgacgcgcc agagaaaggc atagcgggcg tttttctgtt
     3481 tgcagcgtcg ccgttagcgc atttccccag tgggatttgc gcacgcttac ggttggaata
     3541 tctaacgaag tcacctggca gatgcttgca ccatgtaaac gccaggccag ccgggtcgac
     3601 agttcatcgc caaacgttcc cggcggaaag agaacaacgt ccgcaggcgt tcgctgccac
     3661 tgttccacca acgcatccag cacctgttcc gccactacag gctgaggttc aatctgccag
     3721 tgcgccaggg tacaaccact gaaatcctgc gccgccagcc agcttgctat tgcggcattc
     3781 tcctgattta ttgtcacaat tgcgatattc atggctgcat cctttggcgt aaatagtcct
     3841 gccatagctt ttgagctttt tctgctaccg tttgcccatc aatcagcgtc gctccgcgtc
     3901 gttgctctgc tcttgccagt tgcagacact gcatcgctgg catttcggca gcaacagttt
     3961 tacggataat ttctgctttc cccgcagcca ttcgctggcg cattcccggt actggcaagg
     4021 ccacttcacc gcactgacgc acggcaatca ccgcaggcaa gcgaacccgg caacaacgca
     4081 acccatgttc agtacgctgt tcgagggtga taaacagcgc gtcgagagtg aaacgctcca
     4141 cctgggtgaa gcaggtccag cccagcattt ccgccagcaa aaatggcgtt tgcccattct
     4201 gcccttcgct gctttggctg ccggtaatta tcagatccag cggattctga tgctgccatt
     4261 cggcaatatg gcgagcgaca aattccggcg caaagcgcag atctgccgcc gtctccagca
     4321 atacagcttc ctcaaaccca agagccatga gatagcgcag ccagtgcaat gcccgttcat
     4381 cccccatgct caacgcggtt aaagacatcg gcgtaccgtt ttttctctgc gccaacagca
     4441 gcgcggcagc ggcctgttca tcagcaccga gtaaacttcg cagtagcgaa atatccggtc
     4501 cgcttttacc ctgagccgcc gcctgccact ctttttccgc cagcattccg gcatccggtt
     4561 cggctttaaa cgctaacaga atgtt
//
LOCUS       DADMIB010000242         4560 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.245, whole genome shotgun sequence.
ACCESSION   DADMIB010000242 DADMIB010000000
VERSION     DADMIB010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4560)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4560)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4560
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.245"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            92..850
                     /locus_tag="JNZ89_004165"
     CDS             92..850
                     /locus_tag="JNZ89_004165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012599877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HAY8937843.1"
                     /translation="MSFMSSFLLGRFLHPGVFSLCVLLPLLASATTSHISFSYAARQR
                     MQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRR
                     WQALVENNHFLSSNHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNK
                     ILEAKLPRTANEMYHYHRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIES
                     PRTGETIRVSRLAEPFWQDHFLGARWILTEETIL"
     gene            1026..1523
                     /gene="rayT"
                     /locus_tag="JNZ89_004166"
     CDS             1026..1523
                     /gene="rayT"
                     /locus_tag="JNZ89_004166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="REP-associated tyrosine transposase RayT"
                     /protein_id="HAY8937844.1"
                     /translation="MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRNAIIKVKR
                     DRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHA
                     IRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVARGLYPIDWAGDVTDINAG
                     ERIIL"
     gene            complement(1747..3486)
                     /gene="flhA"
                     /locus_tag="JNZ89_004167"
     CDS             complement(1747..3486)
                     /gene="flhA"
                     /locus_tag="JNZ89_004167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhA"
                     /protein_id="HAY8937845.1"
                     /translation="MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAI
                     DADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVC
                     IGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIILTRVSDNGDIAHDVRN
                     QLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSL
                     ETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVIS
                     DGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMAQPSSETYGEIDGVL
                     GNDPAYGMPVTWIQPAQKAKVLNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQ
                     LHNRLSSMAPRLAEDLSAVLNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKD
                     HILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNLVNQAQQGGKVMLDSVP
                     VDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEV
                     PDELELKIMGALM"
     gene            3431..4216
                     /gene="lafU"
                     /locus_tag="JNZ89_004168"
     CDS             3431..4216
                     /gene="lafU"
                     /locus_tag="JNZ89_004168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lateral flagellar export/assembly
                     protein LafU"
                     /protein_id="HAY8937846.1"
                     /translation="MTTIKLIVNSVSKSERESIIAALHGQSIFNGGGLSPLNKISPSH
                     PPKPATVAVPEETEKKARDVNEKTALLKKKSATELGELATSITTIARDAHMEANLEME
                     IVPQGLRVLIKDDQNRNMFERGSAQIMPFFKTLLVELAPVFDSLDNKIIITGHIDAMA
                     YKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVMQVSAMADQMLLDSKNPQSAGNRRI
                     EIMVLTKSASDTLYQYFGQHGDKVVQPLVQKLDKQQVLSQRTR"
BASE COUNT         1086 a         1201 c         1194 g         1079 t
ORIGIN      
        1 tgaaacctca atagtaatat gcaaataagc aattaataat cccgtttact cctccggtct
       61 tttaaaattc tcaccttcat tcagccggtt tatgtccttc atgtcttcgt tcttgctcgg
      121 cagatttctg catccaggcg tgttttcgtt atgcgttttg ctccctttac tcgccagcgc
      181 caccacatca catatctctt tcagctacgc cgcccgccag cggatgcaaa accgtgcgcg
      241 tttattaaaa cagtaccaaa cccatctgaa aaaacaggcc agctacattg tggaaggcaa
      301 tgccgaaagc agaagggcgc tacgccagca caaccgggag cagataaaac agcatccaga
      361 atggtttcct gcgccgctca aggcaagtga cagacgctgg caggcgttgg tagaaaacaa
      421 tcatttcctc agcagcaacc acctgcataa tatcaccgaa gtggcgattc accgtctgga
      481 gcaacagctt ggcaagcctt acgtctgggg cggcacgcgg cccgatcaag gcttcgactg
      541 tagcgggttg gttttttatg cctacaacaa gatccttgag gctaagctcc cgcgcacggc
      601 taatgagatg tatcactacc atcgggcaac cattgtggca aataacgacc tgcgccgggg
      661 agatttgctg tttttccata tccacagccg tgaaattgcc gaccatatgg gcgtgtatct
      721 gggagacggt cagtttattg agtcgccgcg cacgggggaa accattcggg taagtcggtt
      781 agctgaacct ttctggcagg atcatttttt gggcgcgcgg tggatattga cggaagagac
      841 gattttgtag gacggataag gcgtttacgc cgcatccggc ggtggtgcgc agatgcctga
      901 tgcgacgctg acgcgtctta tcatgcctac aaatctgtgc gtttttgcga gccgctttcc
      961 tgttattcca tcacctcatt gccgaccttt ccttttcttc ttaccgttga gaaaaaggag
     1021 tcgccatgtc tgaatatcgt cgttattaca tcaagggggg aacctggttt ttcacggtga
     1081 atttacgcaa tcgtcgaagc caactcttga ccacccagta ccagatgctc cgtaacgcca
     1141 ttattaaagt taagcgagac aggccttttg aaatcaacgc ctgggtcgtt ttgccagagc
     1201 atatgcattg catatggaca ttacctgaag gcgatgatga tttttcctct cgctggcggg
     1261 aaattaaaaa gcaatttacc catgcttgtg gattgaaaaa tatctggcaa ccacgttttt
     1321 gggagcacgc catccgcaat accaaagatt ataggcatca tgttgattat atttatataa
     1381 atccagtaaa gcatggttgg gtaaagcaag tgagtgattg gccattctca acgttccatc
     1441 gcgatgtcgc gcgagggtta tatcccatcg attgggcggg ggacgtaacg gatataaatg
     1501 ctggcgagcg tatcatttta taattatgcg cagatgcctg atgcgacgct ggcgcgtctt
     1561 atcatgccta caaacctgtg ccggatcggt aggccggata aggcgtttat gccgcatccg
     1621 gcggttatgc gcagatgcct gatgcgacgc tggcgcgtct tatcatgcct acaaacctgt
     1681 gctggatcgg taggccggat aaggcgttca cgccgcatcc ggcagttgtg caccaatgct
     1741 ggatacttac atcaacgccc ccataatctt caactccagc tcgtccggca cttcgttata
     1801 cgacagcaca tgcagccccg gcgcaaacaa ccttgcataa cgcgccagca aagggcgcag
     1861 ctgcggtggc accagcagca ccgggtcttt ccccgccgct ttcatctgct ctttcacctg
     1921 tggcatcgta ctctggaact ggttgagcat attcgggtcc actggcacgc tgtcgagcat
     1981 cactttaccg ccctgttgcg cctgattcac taggttagtc agcagatttt ccagctcatt
     2041 attcagggta tacaccgtca gctcctgctt gcgaacgaac ggatgggtaa tgctgcgccg
     2101 cagcgccagg cgcacatcgg ctgccagcag aatatgatct ttggtcaccg cgctactggc
     2161 gaccagcacg gtggcgatgg tgacgatatc gcgcagggaa acgccttcgg tcagcagcgc
     2221 ccggtacact ttcagcaact ggctgtaatt gagcaccgcg cttaaatcct ccgccaggcg
     2281 cggtgccatc gacgacaaac ggttatgcaa ctgcgtaata tcgtcatagt taaataaatc
     2341 aggaatatag ctgcgcacaa tcttatttac atgggtagca atcacgctgg cgctgtcgat
     2401 cacctgatac cccatattca gcaccttcgc tttctgcgca ggctggatcc aggtcaccgg
     2461 catcccgtac gccgggtcgt tccccagcac gccgtctatc tcgccgtagg tttcgctgga
     2521 gggctgggcc atcagtttat ccgccggaat atccgcttca tcagccttaa tgccgttgat
     2581 gaaaatagcg tactggctgg gcttaaggcg gaagttttcc cgaatgcgga tctccggcag
     2641 cagcacgccg ttgccgtcgg atatcacctg tcgcacgccg cgaatacgct gggtgagcgg
     2701 gttgccctgg gctttatcga ccagcgccac cagcttgtag ccgaggctta aactgatagg
     2761 ctcgataagc ggaatggttt cccaactgac ctgttgctcg ctggtttcgg tgatggtgcg
     2821 ggtcagcgtt tcgagacttt tctcttccgc ttccgccgcc tgcgggcgtt tgctcatccg
     2881 ccagccggta aagccaagca gggcgctgaa cagcaaaaac ggcagatgtg gcattcccgg
     2941 cactaccgcc agtacgaaca taattccggt agcggtgtag agcaccgatg ggcttgccag
     3001 caactggtta cgcacgtcat gggcgatatc gccgttgtcg ctgacgcggg tgaggataat
     3061 cgccgccgcg gtggagagta gcagggaagg gatttgcgcc accagcccgt cgccgatggt
     3121 catcagcaca tactgctgga aggcggcgtc ggcgctcagg ttgtatttga agatcccgat
     3181 acagacgccg ccgatcaggt tgatcgccag aatcatcatc ccggcgatag catccccgcg
     3241 cacaaatttc gatgccccgt ccatcgcgcc gtagaaatcg gcctcgctgg caacatcttt
     3301 acgtcgggtt tgtgcctgcg cctgattgat caacccggca ttaagatcgg cgtcaatcgc
     3361 catctgctta ccgggcatcg catccagggt aaagcgggct gaaacctcgg aaatacgctc
     3421 ggcccctttg gtgacgacga taaagttgat tgtcaacagc gtcagtaaat ccgagcgtga
     3481 aagcattatc gccgcgctgc acgggcagtc gatttttaac ggtggtgggc tgtcgccgtt
     3541 aaataaaatc agcccgtctc atccgccaaa acctgccacc gtggcggtgc cggaagaaac
     3601 ggagaaaaaa gcgcgcgacg tcaatgagaa aacggcgctg ctgaagaaga aatccgccac
     3661 cgagcttggc gagctggcaa ccagtatcac caccattgcc cgtgatgcgc atatggaagc
     3721 gaatctggag atggagattg ttccccaggg attacgcgtg ctgattaaag acgaccagaa
     3781 tcgcaatatg ttcgaacgcg gcagcgcgca gattatgccg ttctttaaaa cgctgctggt
     3841 ggagctcgcg ccagttttcg actcgctcga taacaaaatt attattaccg ggcatatcga
     3901 tgcgatggct tacaaaaaca atatctacaa caactggaac ctttcgggtg accgcgcgct
     3961 ttcggctcgt cgggtgctgg aagaggccgg aatgccggaa gataaagtga tgcaggtaag
     4021 cgcaatggcg gaccagatgc tgctggattc caaaaatccg caaagcgcgg gcaaccggcg
     4081 cattgagatt atggtgctga ccaaaagtgc gtccgatacg ctgtatcaat actttggtca
     4141 gcatggggat aaagtggtgc agccgctggt gcaaaagctg gataagcagc aggtgctttc
     4201 gcagcgaacg cgttaaatgc tgaatcttta cgcatttctc aaactctgaa atcactgtat
     4261 actttaccag tgttgagagg tgagcaatgc gtaaaatcat gattttcact tcctaaaaca
     4321 ccccttataa tctggtcata gagtcattat agcactggat gaatatacag atgaggaagg
     4381 tttacagtta cattcgcttt tcgtcaacga aacaagcttt tggtgatagt catcgaagac
     4441 agagtaaggc catacaggat tggttagcca gccatccaga ccacatccta gacgaatctc
     4501 ttagttttga agatttagga cgttcagcct ttcacggtga ccatctaaaa gaaggtggag
//
LOCUS       DADMIB010000243         4445 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.247, whole genome shotgun sequence.
ACCESSION   DADMIB010000243 DADMIB010000000
VERSION     DADMIB010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4445
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.247"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            2..394
                     /locus_tag="JNZ89_004169"
     CDS             2..394
                     /locus_tag="JNZ89_004169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001407380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HAY8937847.1"
                     /translation="MLFPNFSLGEEYEHAPPATNRQISPYLPSGRFRTGLPVEGLAIE
                     RGDLFYACPRASVFYGTALDADLRTRGVSTLVMAGISTTGVVLSSVAWASDADYDVRL
                     VQDCCYDPDRDAHEALLRSGFGGRVQVV"
     gene            532..1416
                     /locus_tag="JNZ89_004170"
     CDS             532..1416
                     /locus_tag="JNZ89_004170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HAY8937848.1"
                     /translation="MSLRTPDLLFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALP
                     AGLLLVMIVRQIPTGIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLM
                     VVFISAALLGSPIRLMAVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGT
                     VLTRKWQPPVPLLTFTAWQLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAG
                     LTYFLWFRGISRLEPTVVSLLGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWL
                     GQRSNRTPRARIACRKSP"
     gene            complement(1448..2647)
                     /gene="tet(A)"
                     /locus_tag="JNZ89_004171"
     CDS             complement(1448..2647)
                     /gene="tet(A)"
                     /locus_tag="JNZ89_004171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HAY8937849.1"
                     /translation="MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGDFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSG
                     AGQRADR"
     gene            2753..3403
                     /gene="tetR(A)"
                     /locus_tag="JNZ89_004172"
     CDS             2753..3403
                     /gene="tetR(A)"
                     /locus_tag="JNZ89_004172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000164043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(A)"
                     /protein_id="HAY8937850.1"
                     /translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWH
                     FRNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAG
                     TRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGG
                     TVEQAPLSPLLRAAIDAFDEADPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
     gene            complement(3435..3677)
                     /locus_tag="JNZ89_004173"
     CDS             complement(3435..3677)
                     /locus_tag="JNZ89_004173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase"
                     /protein_id="HAY8937851.1"
                     /translation="MKTAALDLARERQAHEAGARTRATAHERTPQQERQKAAREAERG
                     REAWTLGQGMKKPVAGCYGRLTRWKGGGDVVYMALL"
     gene            complement(3735..>4445)
                     /locus_tag="JNZ89_004174"
     CDS             complement(3735..>4445)
                     /locus_tag="JNZ89_004174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8937852.1"
                     /translation="DTAGFTDHVFALMHLLGFRFAPRIRDLGETKLYVPQGVQAYPTL
                     RPLIGGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRELG
                     RIERTLFILDWLQSVELRRRVHAGLNKGEARNSLARAVFFNRLGEIRDRSFEQQRYRA
                     SGLNLVTAAIVLWNTVYLERATQGLVEAGKPVDGELLQFLSPLGWEHINLTGDYVWRQ
                     SRRLEDGKFRPLRMPGKP"
BASE COUNT          814 a         1383 c         1408 g          840 t
ORIGIN      
        1 cgtgctgttc cccaactttt cgctcggcga agagtatgaa catgcgccgc cggcgacgaa
       61 tcgccaaatc tcaccgtatc tcccgagcgg acgatttcgc accggtctgc ccgtcgaagg
      121 gcttgcgatc gaacggggcg accttttcta tgcatgtccg cgagccagcg tcttttatgg
      181 cacggcgctc gacgccgacc ttcggacgcg cggcgtaagc acgcttgtca tggccgggat
      241 aagcaccacc ggcgttgttc tttcaagcgt cgcctgggct agtgatgcgg actacgacgt
      301 gcgtttggtc caggactgct gctacgaccc ggatcgggat gcccacgaag ctctgttgcg
      361 ttccgggttc ggcggacgtg tacaggtcgt gtaattttcg ggcctcgcat gatcgcggcc
      421 atagccgcag gtggattggt gcgaggcagg gccagtccaa gtcagggtgc ggtcatcgcg
      481 gcgcctgcaa ctctcaaaaa cccatcgccg tagcggaggt cttgtaatcg catgtcatta
      541 cgcacgcccg atttattgtt cacagcgata gcacctgcca tttggggcag cacctacatt
      601 gtcaccaccc aatacctgcc gaacttctca ccgatgacgg tcgcgatgct gcgggcgttg
      661 ccggcgggtt tattgctcgt gatgatcgtc cgacagattc caacgggaat ctggtggatg
      721 cgcatcttca tcctcggcgc acttaatatt tcgctattct ggagcttgtt gtttatttcg
      781 gtctaccgcc tgccgggcgg ggtcgcggcg acggtaggcg ctgtgcagcc gctgatggtc
      841 gtgttcatct ctgccgctct gctaggtagc ccgatacgat tgatggcggt cctgggggct
      901 atttgcggaa ctgcgggcgt ggcgctgttg gtgttgacac caaacgcagc gctagatcct
      961 gtcggcgtcg cagcgggcct ggcgggggcg gtttccatgg cgttcggaac cgtgctgacc
     1021 cgcaagtggc aacctcccgt gcctctgctc acctttaccg cctggcaact ggcggccgga
     1081 ggacttctgc tcgttccagt agctttagtg tttgatccgc caatcccgat gcctacagga
     1141 accaatgttc tcggcctggc gtggctcggc ctgatcggag cgggtttaac ctacttcctt
     1201 tggttccggg ggatctcgcg actcgaacct acagttgttt ccttactggg ctttctcagc
     1261 ccggggaccg ccgtgttgct aggatggttg ttcttggatc agacgctgag tgcgcttcaa
     1321 atcatcggcg tcctgctcgt gatcgggagt atctggctgg gccaacgttc caaccgcact
     1381 cctagggcgc gtatagcttg ccggaagtcg ccttgacccg catggcatag gcctatcgtt
     1441 tccacgatca gcgatcggct cgttgccctg cgccgctcca aagcccgcga cgcagcgccg
     1501 gcaggcagag caagtagagg gcagcgcctg caatccatgc ccacccgttc cacgttgtta
     1561 tagaagccgc atagatcgcc gtgaagagga ggggtccgac gatcgaggtc aggctggtga
     1621 gcgccgccag tgagccttgc agctgcccct gacgttcctc atccacctgc ctggacaaca
     1681 ttgcttgcag cgccggcatt ccgatgccac ccgaagcaag caggaccatg atcgggaacg
     1741 ccatccatcc ccgtgtcgcg aaggcaagca ggatgtagcc tgtgccgtcg gcaatcattc
     1801 cgagcatgag tgcccgcctt tcgccgagcc gggcggctac agggccggtg atcattgcct
     1861 gggcgagtga atgcagaatg ccaaatgcgg caagcgaaat gccgatcgtg gtcgcgtccc
     1921 agtgaaagcg atcctcgccg aaaatgaccc aaagcgcggc cggcacctgt ccgacaagtt
     1981 gcatgatgaa gaagaccgcc atcagggcgg cgacgacggt catgccccgg gcccaccgga
     2041 acgaagcgag cgggttgaga gcctcccggc gtaacggccg gcgttcgcct ttgtgcgact
     2101 ccggcaaaag gaaacagccc gtcaggaaat tgaggccgtt caaggctgcc gcggcgaaga
     2161 acggagcgtg gggggagaaa tcgcccatca gcccaccgag cacaggtccc gcgaccatcc
     2221 cgaacccgaa acaggcgctc atgaagccga agtgccgcgc gcgctcatcg ccatcagtga
     2281 tatcggcaat ataagcgccg gctaccgccc cagtcgcccc ggtgatgccg gccacgatcc
     2341 gcccgatata gagaacccaa aggaaaggcg ccgtcgccat gatggcgtag tcgacagcag
     2401 cgccggccag cgagacgagc aagaccggcc gccgcccgaa acgatccgac agcgcgccca
     2461 gcacaggtgc gcaggcaaat tgcatcaacg catacagcgc cagcagaatg ccatagtggg
     2521 cggtgacgtc gttcgagtga accagatcgc gcaggaggcc cggcagcacc ggcataatca
     2581 ggccgatgcc gacagcgtcg agcgcgacag tgctcagaat tacgatcagg ggtctgttgg
     2641 gtttcacgtc tggcctccgg accagcctcc gctggtccga ttgaacgcgc ggattcttta
     2701 tcactgataa gttggtggac atattatgtt tatcagtgat aaagtgtcaa gcatgacaaa
     2761 gttgcagccg aatacagtga tccgtgccgc cctggacctg ttgaacgagg tcggcgtaga
     2821 cggtctgacg acacgcaaac tggcggaacg gttgggggtt cagcagccgg cgctttactg
     2881 gcacttcagg aacaagcggg cgctgctcga cgcactggcc gaagccatgc tggcggagaa
     2941 tcatacgcat tcggtgccga gagccgacga cgactggcgc tcatttctga tcgggaatgc
     3001 ccgcagcttc aggcaggcgc tgctcgccta ccgcgatggc gcgcgcatcc atgccggcac
     3061 gcgaccgggc gcaccgcaga tggaaacggc cgacgcgcag cttcgcttcc tctgcgaggc
     3121 gggtttttcg gccggggacg ccgtcaatgc gctgatgaca atcagctact tcactgttgg
     3181 ggccgtgctt gaggagcagg ccggcgacag cgatgccggc gagcgcggcg gcaccgttga
     3241 acaggctccg ctctcgccgc tgttgcgggc cgcgatagac gccttcgacg aagccgatcc
     3301 ggacgcagcg ttcgagcagg gactcgcggt gattgtcgat ggattggcga aaaggaggct
     3361 cgttgtcagg aacgttgaag gaccgagaaa gggtgacgat tgatcaggac cgctgccgga
     3421 gcgcaaccca ctcactacag cagagccatg tagacaacat cccctccccc tttccaccgc
     3481 gtcagacgcc cgtagcagcc cgctacgggc tttttcatgc cctgccctag cgtccaagcc
     3541 tcacggccgc gctcggcctc tctggcggcc ttctggcgct cctgctgcgg cgtccgctcg
     3601 tgggccgtgg cgcgggtccg cgcgccggcc tcgtgcgcct ggcgctcgcg ggcgaggtcc
     3661 agggcggccg tcttcacgtt ctgccttgcg cagatgagat aggggagccc gcagaattcg
     3721 gaaaaaatcg tacgctaagg ttttccgggc atccgtaagg gccgaaactt cccgtcttcc
     3781 agtctgcggc tctgccgcca gacgtaatcg ccggttaggt tgatgtgctc ccagcccagc
     3841 ggcgacagga attgcagcag ctcgccgtcc accggcttgc cggcctcgac caacccctgg
     3901 gtggcgcgtt ccaggtacac cgtgttccac agcacgatag ccgccgtcac caggttgagg
     3961 ccgctggccc ggtagcgctg ctgctcgaag ctccgatccc tgatttcccc aaggcggttg
     4021 aagaacaccg ccctggccag cgagttgcgc gcctcacctt tgttcaggcc ggcatgcacg
     4081 cggcggcgca gttcaacact ttgcagccag tccaggatga acagcgtgcg ctcgatccgg
     4141 cccagctcgc gcagggccac ggccagtccg ttctggcgcg ggtagctgcc gagcttgcgc
     4201 agcatcagcg aggcggtgac ggtgccctgc ttgatcgagc tggccaggcg caggatgtcg
     4261 tcccagtggg cacgcacgtg cttgatgttc agggtgccgc cgatcagcgg gcgcaacgtc
     4321 gggtaggctt gcacgccctg cggcacgtac agcttggttt cgccgaggtc gcggatgcgc
     4381 ggcgcgaagc ggaagcctag caggtgcatc agggcaaaga cgtgatcggt gaagccggcc
     4441 gtgtc
//
LOCUS       DADMIB010000244         4434 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.248, whole genome shotgun sequence.
ACCESSION   DADMIB010000244 DADMIB010000000
VERSION     DADMIB010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4434
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.248"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1088
                     /gene="nadB"
                     /locus_tag="JNZ89_004175"
     CDS             <1..1088
                     /gene="nadB"
                     /locus_tag="JNZ89_004175"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HAY8937853.1"
                     /translation="VGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGD
                     GIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDF
                     DERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDL
                     TQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLV
                     YGWSAAEDITRRMPDAHGVSTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVR
                     TTKRLERALRRINMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGL
                     HFTLDYPELLTHSGPSILSPGNHYINR"
     gene            complement(1073..1810)
                     /gene="trmN"
                     /locus_tag="JNZ89_004176"
     CDS             complement(1073..1810)
                     /gene="trmN"
                     /locus_tag="JNZ89_004176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417070.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(1)(Val)
                     (adenine(37)-N(6))-methyltransferase TrmN"
                     /protein_id="HAY8937854.1"
                     /translation="MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAG
                     VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHT
                     ADIQQWLTQQTVRFDLIISNPPYYQQGVECAIPQREQARYTTTLDHPSLLTCAAECIT
                     EEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
                     DRLVIRGPDQNYSEAYTALTQAFYLFM"
     gene            1942..3276
                     /gene="srmB"
                     /locus_tag="JNZ89_004177"
     CDS             1942..3276
                     /gene="srmB"
                     /locus_tag="JNZ89_004177"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HAY8937855.1"
                     /translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV
                     LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
                     THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
                     RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE
                     RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNC
                     YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH
                     RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIEELRPKTRTPSEKQTG
                     KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE"
     gene            complement(3485..4366)
                     /locus_tag="JNZ89_004178"
     CDS             complement(3485..4366)
                     /locus_tag="JNZ89_004178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311470.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8937856.1"
                     /translation="MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFS
                     VQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKGSDPDGELRVVSGETLLS
                     YRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELG
                     EQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIEL
                     LSIESIKRCVAANIGVSYLPRFAVEKELESGELIELPFGEQSQTITAMCAHHAGKAVS
                     PAMHTFIQCIEECFLPG"
BASE COUNT         1126 a         1208 c         1123 g          977 t
ORIGIN      
        1 ttgtaggcgc gtgggtatgg aaccgaaata aagaaacggt ggaaacctgc cacgcaaaag
       61 cagtggtact ggcaaccggc ggtgcgtcga aggtgtatca gtacaccacc aatccggata
      121 tttcttctgg cgatggcatt gctatggcgt ggcgcgcggg ctgtcgggtt gccaatctcg
      181 aatttaatca gttccaccct accgcactgt atcacccaca ggcacgcaat ttcctgttaa
      241 cggaagcact gcgcggcgaa ggcgcttatc tcaagcgccc ggatggcacg cgttttatgc
      301 ccgattttga tgagcgcggc gaactggccc cgcgcgatat tgtcgcccgc gccattgacc
      361 atgaaatgaa acgcctcggc gcagattgta tgttcctcga catcagccat aagcccgccg
      421 attttattcg ccagcatttc ccgatgattt atgaaaaatt gctcgggctg gggattgatc
      481 tcacacaaga accggtaccg attgtgcctg ctgcacacta tacctgcggt ggtgtaatgg
      541 ttgatgatca tgggcgtacg gacgtcgagg gcttgtatgc cattggcgag gtgagttata
      601 ccggcttaca cggcgctaac cgcatggcct cgaattcatt gctggagtgt ctggtctatg
      661 gctggtcggc ggcagaagat atcaccagac gtatgcctga tgcccacggc gtcagtacgt
      721 taccaccgtg ggatgaaagc cgcgttgaga accctgacga acgggtagta attcagcata
      781 actggcacga gctacggctg tttatgtggg attacgtcgg cattgtgcgc acaacaaaac
      841 gtcttgagcg cgccctgcgg cgtatcaata tgttgcaaca ggaaatagac gaatattacg
      901 cccacttccg cgtgtcgaat aatttgctgg agctgcgtaa tctggtgcag gttgcggaat
      961 tgattgttcg ctgtgccatg atgcgcaagg agagtcgtgg cctgcatttc acactggatt
     1021 atccggaact gctcacccat tccggtccgt cgatcctttc ccccggcaat cattacataa
     1081 acagataaaa agcctgggtc agcgccgtat acgcttcgga atagttctgg tctggcccac
     1141 gaatgactaa gcgatcgcta aagcattctc ccgcctgcgg ggagaatgcc agcagcaccc
     1201 gatgcggcag tcgcgcttcg ttttccgcca catccgtccg caaacgtaaa tgccagccca
     1261 tgcttaatgc cagctccgta aaaccattac caatctgctc tggcagcact acgcagaaaa
     1321 atccctcttc ggtaatgcac tccgccgcac aggtcagcag cgatgggtga tcaagcgtag
     1381 tggtatagcg agcctgttcc cgttgaggga tcgcgcactc tactccctgc tgatagtaag
     1441 gtgggttact gatgattaaa tcgaagcgta ctgtctgctg tgtgagccac tgctgaatat
     1501 ccgccgtatg gacgttaatc cgctctgccc acggggactg gttgatattt tcctgcgcct
     1561 gcgcggcagc ttcactttcc agctcaacag catcaattat cacgctgtca ctggttcgct
     1621 gcgccagcat cagtgccagc aacccgctac ccgcgccgat atcaaggcaa cgtttcaccc
     1681 cagccaccgg tgcccatgcg cccagcaaaa tgccatccgt tcccactttc atcgcacagc
     1741 gatcgtgagc aacaaaaaac tgtttaaaag taaatccatt acgacgaagc acggatgtag
     1801 actgtgacat gaaaataaaa ccttgcagga aaaacggcga tagcaccggg tgagaacaat
     1861 acccgagaag cgatatccat acaaacagat gaagattgca gccgtaacgt ctataatcag
     1921 cgccccacac agaggtagaa catgactgta acgacttttt ccgaacttga actcgacgaa
     1981 agcctgctgg aagccctcca ggataaaggt ttcactcgcc cgaccgccat tcaggctgcc
     2041 gccattccgc ctgcgctcga tggccgtgat gtactcggtt ctgcgccgac aggcaccggt
     2101 aaaacggcgg cgtatctgct gccagcgttg cagcacctgc tcgatttccc gcgtaagaaa
     2161 tccggtccgc cgcgtatttt gatcctcacc ccaactcgcg agctggcgat gcaggtggcc
     2221 gatcatgccc gcgaactggc gaaacatacg catctggata tcgccaccat taccggcggc
     2281 gtagcctata tgaaccacgc ggaagtgttc agcgaaaatc aggacatcgt ggtcgccacg
     2341 accggacgtc tgctgcaata cataaaagaa gagaacttcg attgccgcgc ggttgaaacg
     2401 ctgatcctcg acgaagcaga ccgtatgctg gatatgggct tcgctcagga tatcgaacat
     2461 attgctggcg aaacgcgctg gcgtaaacag accctgctct tttcggcaac gctggaaggc
     2521 gatgcgattc aggactttgc cgagcgtctg ctggaagatc cggtggaggt ttctgccaat
     2581 ccgtccaccc gtgagcgcaa aaaaattcat cagtggtatt accgcgccga tgacctggaa
     2641 cataaaaccg cattgctggt gcatctgtta aaacagccgg aagcgacccg ctcaattgtg
     2701 tttgtgcgta agcgtgaacg tgtgcatgag ctggcaaact ggctgcgcga agcgggcatc
     2761 aacaactgct atctcgaagg tgagatggta cagggcaagc gtaatgaagc gattaaacgc
     2821 ctgaccgaag gccgcgtaaa cgtactggta gcaaccgatg ttgccgcgcg cggtatcgac
     2881 attccagacg tcagccacgt ctttaacttc gatatgccgc gcagtggtga tacttatttg
     2941 caccgtatcg gacgtaccgc gcgcgccggt cgtaaaggca ccgcgatttc gctggtggaa
     3001 gcccatgacc atctgctgct tggcaaagtt ggccgttata ttgaagagcc gataaaagct
     3061 cgcgtcattg aggaactacg cccgaaaacg cgtacgccaa gcgagaagca gaccggcaag
     3121 ccatcgaaga aagtactggc aaaacgcgcc gagaagaaaa aagctaaaga gaaagagaag
     3181 ccgcgggtga aaaaacgcca tcgcgacacc aaaaatattg gtaagcgccg taaaccgagc
     3241 ggaacgggcg tgccaccgca aacgacagaa gagtaatctt aattccgggt ttaagcccgg
     3301 aattaaaagt gctggcaaac gcaaaactgc ctgatgcgct acgcttatca ggcctacatg
     3361 gctcatgcaa tatattgaat ttgcacgatc ttgtaggccg gataaggcgt tcacgccgca
     3421 tccggcatga acaaaacgca cttcgtcgac aagttgggtg ccgggtttaa gcccggcatt
     3481 atttttatcc cggcaaaaaa cactcttcaa tacactgaat aaaagtgtgc atcgccgggc
     3541 taaccgcttt tccagcatgg tgtgcgcaca tagccgtaat ggtctgcgac tgttcgccaa
     3601 aaggcaattc aattaattct ccgctctcaa gctctttttc caccgcaaag cggggcaagt
     3661 aactgacacc gatattcgcc gcgacacaac gtttgatact ttcaatgctt aacagctcaa
     3721 tggtgttttc caccgtgatc cgccgctgac gcagcgtgct ctcaaatatc tgccggaaga
     3781 cacattgcgg ttcgttgata ataaagctac aggcgttatg tcttcccggc tcagtaaaat
     3841 cgacatctgc aatttgcggt gaagccacca gcaccagcga ttgttcaccc aactctcgtc
     3901 ggttcagggc atcatcattc cctacgcgat aaaagacgcc gacatcggcc tcatcattca
     3961 gtagcgcatc acggatcacg taacagttca gcgactgcaa cgataaacgc acttttggtg
     4021 cgcgttgccg aaaacgctgc aacacctgcg gcattcggta agagagcaac gtttcgcccg
     4081 aaacaacgcg tagttccccg tccggatctg accccttttt ggcagcctca cgaagcgtat
     4141 ccatcactcg ggtaagttca taaatgtgcg gcagcaactt ttttccttcg cgggtaaggc
     4201 acatccgtcg gccaattttc tcaaataact ggactgaaaa ctcctgctca agctgctgaa
     4261 tatgaaaagt caccgtcgat tgtgtacagc acaatttttg cgaagctcgc aaaaaggaac
     4321 cctcttccac cacggtttta agcgtaataa aacggcgcag atccataacc ccgaacctat
     4381 cgaaaatatc gaatctagaa tataaaaaca ttcatttttt taaatgttct gtgt
//
LOCUS       DADMIB010000245         4429 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.249, whole genome shotgun sequence.
ACCESSION   DADMIB010000245 DADMIB010000000
VERSION     DADMIB010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.249"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            127..456
                     /locus_tag="JNZ89_004179"
     CDS             127..456
                     /locus_tag="JNZ89_004179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HAY8937857.1"
                     /translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAE
                     AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGA
                     LLSMRKS"
     gene            704..949
                     /gene="nrdH"
                     /locus_tag="JNZ89_004180"
     CDS             704..949
                     /gene="nrdH"
                     /locus_tag="JNZ89_004180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HAY8937858.1"
                     /translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR
                     AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
     gene            946..1356
                     /gene="nrdI"
                     /locus_tag="JNZ89_004181"
     CDS             946..1356
                     /gene="nrdI"
                     /locus_tag="JNZ89_004181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HAY8937859.1"
                     /translation="MSQLVYFSSSSENTQRFIERLGLPAVRIPLNERERIQVDEPYIL
                     IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG
                     VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
     gene            1329..3473
                     /gene="nrdE"
                     /locus_tag="JNZ89_004182"
     CDS             1329..3473
                     /gene="nrdE"
                     /locus_tag="JNZ89_004182"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HAY8937860.1"
                     /translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF
                     MATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAYAHTSGFRFQTF
                     LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDATLALQLTDEMLSGRFQPA
                     TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
                     APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
                     ADEKIRIKTLSLGVVIPDITFHLAKENVQMALFSPYDVERVYGKPFADIAISEHYDEL
                     VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPVAGRINMSNLCSEIL
                     QVNCASEYDENLDYARTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH
                     IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT
                     SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMW
                     AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA
                     PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
                     AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL"
     gene            3483..4397
                     /gene="nrdF"
                     /locus_tag="JNZ89_004183"
     CDS             3483..4397
                     /gene="nrdF"
                     /locus_tag="JNZ89_004183"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HAY8937861.1"
                     /translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
                     WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPYALTPHEEAVLSNISFMEAVHA
                     RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
                     LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL
                     KSFAFDLLLELYDNELQYSDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMA
                     EVNPAILAALSPNADENHDFFSGSRIGN"
BASE COUNT         1093 a         1131 c         1131 g         1074 t
ORIGIN      
        1 cgggcctacc ttacctgatt gcgcattcac aacgctttca gaaaagtcca taaagccgcg
       61 atgaacctca gttaagaaaa ttatggtcta cactgaaaat tacatcgaat tctaatgggg
      121 gatcatatgt ttaaccgacc gaaccgcaac gacgttgatg atggcgtgca ggatatccag
      181 aatgatgtca atcaattagc tgacagcctc gaatctgtat tgaagtcctg gggcagcgac
      241 gccaaagggg aagctgaagc cgcacgcagt aaagctcagg cgttgctgaa agaaaccagg
      301 gcgcgaatgc atggtcgtac tcgcgtccag caagccgcgc gcgatgccgt tggctgcgcg
      361 gattcttttg ttcgtgaaag accctggtgt agcgtgggta cagcagctgc ggtaggtatt
      421 tttatcggcg cactgttaag catgcgcaaa tcgtagtgca aaaatgataa taaatacgcg
      481 tctttgaccc cgaagcctgt cttcggggtt tctttttgcc tggtgaatca caaaaatccc
      541 cctcccccgt cacgctcata tccagggtaa tttcgatcac tatttgctat atattgtgta
      601 gttgaatctt ttttcaacta catctagtat ctctgtatca acagagagac aacccgacgc
      661 gtatcatcgc gccgtatctt cattttaaac ggaaatacga atcatgcgca taactattta
      721 cactcgtaac gattgcgttc agtgccacgc caccaaacgg gcgatggaaa accgggggtt
      781 tgattttgaa atgattaatg tcgatcgcgt tcctgaagca gcggaagcgt tgcgtgctca
      841 gggctttcgt cagttgccgg tagtgattgc tggcgatctt agctggtctg gtttccgtcc
      901 ggacatgatt aaccgtctgc atccagcgcc acacgcggcc agtgcatgag ccagctcgtc
      961 tacttctcca gcagctccga aaacacgcag cgttttatcg aacgtttagg tctgcccgcg
     1021 gtgcgcatcc cgctcaatga gcgggaacgg attcaggtag acgagcctta catcctgatc
     1081 gtgccctctt acggcggcgg cggtacggct ggcgcggtgc cacgacaggt aattcgcttt
     1141 ttaaacgacg agcacaaccg ggcgttgctt cgcggcgtta ttgcttctgg taatcgcaac
     1201 tttggtgagg cgtatggccg cgccggagat gtgattgccc ggaaatgcgg cgtgccgtgg
     1261 ctgtaccgtt ttgaactcat gggtacgcaa agcgatatcg aaaacgttcg taaaggagta
     1321 accgaatttt ggcaacgaca accgcagaat gcctgacgca ggaaacgatg gattaccacg
     1381 cgctgaatgc gatgcttaac ctctacgata gcgcaggtcg cattcagttc gataaagacc
     1441 gccaggccgt tgacgccttt atggcgacgc atgtgcgtcc gaacagtgtg accttcagta
     1501 gccagcagca gcgcctgaac tggctggtca acgaaggtta ctatgatgaa agcgttctta
     1561 atcgctactc tcgcgacttt gtcattacgc tgtttgccta cgcacacacc agcggttttc
     1621 gtttccagac attcctcggg gcatggaagt tttacaccag ctatacgttg aagacattcg
     1681 acggtaaacg ttatctggaa gattttgccg atcgagtcac gatggtggcg ctgacgctgg
     1741 cacaaggcga tgcgacgctg gcgttgcaac tgaccgatga aatgctgtca ggacgctttc
     1801 agccagccac gccgacattc ctcaactgcg gtaagcagca gcgcggcgaa ctggtttcct
     1861 gttttctgct gcgtattgaa gacaatatgg agtcgattgg ccgggcggta aattccgcac
     1921 tgcaactgtc gaaacgcggc ggcggcgtgg catttttgct gtcgaatctg cgagaagcgg
     1981 gcgcgccaat taaacgtatt gaaaatcaat cttctggcgt aattccggtg atgaaaatgc
     2041 tggaagacgc attttcctat gccaaccaac tcggcgcgcg tcagggggca ggtgcagtct
     2101 atttacatgc tcatcatccc gatattctgc gttttctcga tacaaaacgg gaaaatgccg
     2161 acgaaaaaat ccgcattaaa acactgtcgc tgggcgtggt gatcccggat atcactttcc
     2221 atctggcaaa agagaatgtg cagatggcgc tgttttcgcc ctatgacgtt gagcgagttt
     2281 atggcaagcc gtttgccgat atcgccatca gcgaacacta tgacgaactg gttgccgatg
     2341 aacgcatccg caaaaaatac ctcaacgccc gtgatttctt ccagcggctg gcagaaatcc
     2401 agtttgagtc cggctatccc tacatcatgt atgaagacac ggtaaaccgt gctaaccctg
     2461 tcgccgggcg cataaatatg agtaatctct gctcagagat tttgcaggtc aactgtgcct
     2521 cagagtatga cgagaatctc gactatgccc gcacaggcca tgatatctcc tgcaatttag
     2581 gttcgttgaa tattgcgcac accatggatt cccccgattt tgcccgcacg gtagagactg
     2641 ccgtgcgcgg tttaacggcg gtgtcagata tgagtcatat ccgcagcgtg ccgtccatcg
     2701 aagccggaaa tgccgcctca cacgccatcg gactggggca gatgaattta cacggctatc
     2761 tggcgcgaga aggcatcgct tatggttcgc cggaagcact ggatttcacc aatctctatt
     2821 tctatgccat cacctggcac gcactgcgta cctcgatgtt gctggcgcgc gaacgcggtg
     2881 aaaccttcgc cgggttcaaa cagtcacgtt atgccagtgg tgaatatttt agccaatatc
     2941 tgcaaggtaa ctggcagccg aaaacggcga aagttggcga actgtttgcc cgcagcggta
     3001 ttacgttacc tacccgtgag atgtgggcgc aactgcgcga cgacgtgatg cgctacggca
     3061 tttataacca gaatcttcag gcggtgccgc caaccggttc tatctcttat atcaaccatg
     3121 ctacgtcgag tattcatccg attgtggcga aagtagagat acgcaaagag ggcaaaacag
     3181 gacgcgttta ctaccctgcc ccgtttatga ctaacgagaa tctggcgctg tatcaggatg
     3241 cttacgaaat cggcgcagaa aagatcatcg acacctacgc cgaagcgact cgccatgtcg
     3301 atcaggggct gtcgctgacg ctgtttttcc ccgataccgc caccactcgc gatatcaaca
     3361 aagcgcagat ttacgcctgg cgcaagggta tcaaaacgct ctattacatt cgcctgcgtc
     3421 agatggcgct ggaaggcact gaaattgaag gctgcgtctc ctgtgcactt taaggaatat
     3481 ctatgaaact ctcacgtatc agcgccatca actggaacaa gatatctgac gataaagatc
     3541 tggaggtgtg gaatcgcctg accagcaatt tctggctacc agaaaaggtg ccgctgtcga
     3601 acgatattcc tgcctggcag acattaactg tcgtagaaca acaactgacg atgcgcgttt
     3661 ttactggcct gacgctgctc gacacgctgc aaaatgttat cggcgcgcct tcgctgatgc
     3721 cctatgcact cacgcctcat gaagaagcgg tattatcgaa tatcagcttt atggaagcgg
     3781 ttcatgcccg ctcttacagt tcgattttct cgacgctgtg tcagaccaaa gatgtcgatg
     3841 ccgcctacgc ctggagtgaa gaaaacgcac cgttgcagcg aaaagctcag attattcagc
     3901 aacattatcg cggtgatgat ccgctgaaaa agaaaatcgc cagtgtgttt cttgaatctt
     3961 ttttgttcta ttccggtttc tggctgccga tgtatttttc cagccgcgga aagctgacca
     4021 ataccgcaga tctgatccgt ctgattatcc gcgatgaagc agtccacggt tactacatag
     4081 gctataaata tcagaaaaac atggaaaaga tatctctggg acaacgtgaa gagttgaaga
     4141 gtttcgcctt cgatttgttg ctggaactct acgacaacga gttgcaatac agcgatgagc
     4201 tgtacgccga aaccccgtgg gctgacgatg tgaaagcgtt tctctgttac aacgccaata
     4261 aggctttgat gaatctgggc tacgaaccgt tatttcccgc agaaatggcg gaagtgaatc
     4321 cggcaatcct cgccgcgctt tcgccgaatg ccgatgaaaa tcacgatttc ttttccggtt
     4381 cacgtatagg aaattgaaaa actaagcgat acccctgtcc gcgccttat
//
LOCUS       DADMIB010000246         4399 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.250, whole genome shotgun sequence.
ACCESSION   DADMIB010000246 DADMIB010000000
VERSION     DADMIB010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4399
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.250"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            225..597
                     /locus_tag="JNZ89_004184"
                     /pseudo
     CDS             225..597
                     /locus_tag="JNZ89_004184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611434.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1159..2106)
                     /gene="icsP"
                     /locus_tag="JNZ89_004185"
     CDS             complement(1159..2106)
                     /gene="icsP"
                     /locus_tag="JNZ89_004185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease IcsP"
                     /protein_id="HAY8937862.1"
                     /translation="MKLKFLVLALCVPAIFTTHATTNYPLFIPDNISTDISLGSLSGK
                     TKERVYHPKEGGRKISQLDWKYSNATIVRGGIDWKLIPKVSFGVSGWTTLGNQKASMV
                     DKDWNNSNTPQVWTDQSWHPNTHLRDANEFELNLKGWLLNNLDYRLGLIAGYQESRYS
                     FNAMGGSYIYSENGGNRNKKGTHPSGERTIGYKQLFKIPYIGLTANYRHENFEFGAEL
                     KYSGWVRSSDTDKHYQTETIFKDEIKNQNYCSVAANIGYYVTPSAKFYIEGSRNYISN
                     KKGDTSLYEQSTNISGTIKNSASIEYIGFLTSAGIKYIF"
     gene            complement(3487..3639)
                     /locus_tag="JNZ89_004186"
                     /pseudo
     CDS             complement(3487..3639)
                     /locus_tag="JNZ89_004186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            3695..4387
                     /gene="ospZ"
                     /locus_tag="JNZ89_004187"
     CDS             3695..4387
                     /gene="ospZ"
                     /locus_tag="JNZ89_004187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     methyltransferase OspZ"
                     /protein_id="HAY8937863.1"
                     /translation="MISPIKNIKNVFPINTANTEYIVRNIYPRVEHGYFNESPNIYDK
                     KYISGITRSMAQLKIEEFINEKSRRLNYMKTMYSPCPEDFQPISRDEASIPEGSWLTV
                     ISGKRPMGQFSVDSLYHPDLHALCELPEISCKIFPKENSDFLYIIVVFRNDSPQGELR
                     ANRFIELYDIKREIMQVLRDESPELKSIKSEIIIAREMGELFSYASEEIDSYIKQMND
                     RFSQIKARMSVT"
BASE COUNT         1353 a          861 c          848 g         1337 t
ORIGIN      
        1 gatctggttc aacaatatgc agatggtaca caacctcttt aaccagccca tccggattat
       61 tcagagccct tccgcaatcc ggaataaaag tgctgtttta ccgtgaaccc tctgaaaatc
      121 agcgagcagt gttttaacca gccgacgttc agagcgtact gacagacggt ggacaatttg
      181 aataaacagt tcaatcagac cgtagatgct ctcccgttgg cgacatgctg ggagcggtgg
      241 aacaccgctt cggcaacgag cttccggcgt ctccagtgaa gtgactgacg gataatggtt
      301 catgctaccg ggctaatgaa acacgccagt tcacccggat gttgggactt tgttgaaccg
      361 aagaacacgg cggtgcggag tccggagagt aacagaatag caaagagctt cgtgaaaaca
      421 ataaagtgtg actacatcag tatcatgccc aaacctgacg ggttaacggc agcaaagaac
      481 cttgcagagg cattcgagca ttataacgaa tggcatccgc atagtgcgct ggattatcgc
      541 tcgccacggg aatatctgcg gcagcgggcc aatgataaca ggtgtctgga aatatagggg
      601 caaagccacc cacgaacgat ccagcatata atcaagaaat tagatttcat ttaacataag
      661 atagattatg tgcaccaaga ggcatttcct taatttctga atttacaggc tcttttgctc
      721 tctttgctat gctgtggatt tggaaagata gagtgctggc tgattattta ggtattttca
      781 tcagcatgtc cctgatagca ctgttccatc agcgctttca ggcgataata gtagaccttg
      841 ggtagcctct gctcatgtgt aacttgatac cccgagaaca gccacgatga tctaagcggt
      901 tcttatttct ccggtctcag ggtcggtaat gccaacagta agtccacagt aatcaacgaa
      961 gagttttttg aaccgccccg gaaatcctgg agactaaacg ccctgagaaa gaggtaaaca
     1021 gaatgactaa aaatacacgt ttttcccccg aagtccgtca acgggcagtt cgtatggttc
     1081 tggaaagtca gggcgaatat gactcacaat gggcggcaat ttttagccat gaaaacgtaa
     1141 tcaactcggt gaaccaattc aaaaaatata ctttatacct gcggaagtga gaaaaccaat
     1201 atattcaata cttgcactat ttttaatggt gccagatata ttggtacttt gctcataaag
     1261 agatgtatca ccttttttat tagaaatgta atttctggag ccttctatat aaaattttgc
     1321 actgggggtg acatagtatc caatattcgc agcaacagag cagtaatttt ggttttttat
     1381 ttcatcttta aaaattgtct cagtctgata gtgtttatct gtatcagatg aacgaaccca
     1441 accactatat ttcagttctg ctccaaactc aaaattctca tggcggtaat tagcagttaa
     1501 tccaatataa ggtattttga agagctgttt gtaacctatt gttctttcac cactaggatg
     1561 tgtccctttt ttattcctgt tccccccgtt ttcactataa atataactcc ctcccattgc
     1621 attaaaactg taacgactct cttggtaacc tgctattagt ccaagtcgat aatccaaatt
     1681 atttaataac caacctttaa gattcagctc gaattcgtta gcatcacgga gatgcgtatt
     1741 gggatgccag ctctggtcgg tccatacctg aggggtattg gaattgttcc agtctttatc
     1801 aaccatgctt gctttctggt tacctaaagt agtccaaccg gaaactccga aagacacttt
     1861 tggaattagc ttccaatcga tgccacctct aacaatagtc gcattactgt atttccagtc
     1921 cagttgacta atttttctcc ccccttcctt gggatgataa acgcgttctt ttgttttgcc
     1981 actcagagat cctagactaa tatccgtact gatgttatcc ggtatgaaaa gtggatagtt
     2041 agtggtagca tgtgtagtaa agatcgcagg tacacaaagt gcaagtacaa ggaattttaa
     2101 tttcatcgag aactctactt ttttggttga aatgtccatg atcttcttac tttataagat
     2161 aaacgtcaat gccaagcatt attttaatta aatatttgtt tatgttacca agaacatatc
     2221 ttttattata atatttattg aacttttgta aaaataaaaa aatacctcat tgtgcgaata
     2281 aagtaacggg ggccatagat ttctctacct accttttggt gttcatacct gaggctgata
     2341 gtttcaggat tccgcgacaa ttctactcac cttcttgttc tctcgccaat atgaaatcaa
     2401 tcagaaaagc gttccataag aacaacgata agacaataaa ttgtcatcac ggctgcaata
     2461 gccaacgtgc ctttcagtac caacatgaca acctcctgta tttgacgtaa cgtgtgctga
     2521 taaatatgta tttgtatctc aactgactca atacaacact taagtatagt ttttcagatt
     2581 ttgtttttcc cgtgaaatat tatggaaatg gcagaagcaa tacattgaat tccgattcga
     2641 gtgaatacgg ctagcgggca cctcacttta gcactgaagc catcaacttt tatttgactt
     2701 atttcaatgg aaagctttct cactatcagt acaggtaatt cccatccttt taaagtcgag
     2761 agtcagactg cgactaatac agttaaagtg accaaactca gttatcctct acacatttta
     2821 cctcatgttt acttggacaa ttcattggtg cttttataaa agaataaata ttctactaat
     2881 ttaatgcatc acctaaaata gtatttttta taatagaact gtatctatag tatattatta
     2941 aagcttaatt atttattatg ctttaatgtg gttgtccgat taaggactaa tccttgaaaa
     3001 cgccgtatag ggcgggagtt cactctattg cgataacgta accgtacaat attgtgcgtt
     3061 tcccaaattg accactactg aactattctg ggatttaaat gcaataaaat ggttggttga
     3121 aggtcgtggt gatgatgtta gtccttttga gaatattcca gtgccagatc ttacttataa
     3181 taaagaggct tggcagtttg gataagctat tgtccttatt ccactaatac aaactttttg
     3241 taaagtatat taaatatact tcatttcata ctgaaatccc cggaagtatt caatcaaaca
     3301 attacaccat aaaaggaaga gggagcccca attaagttat caagcatgtt tatgatacct
     3361 gcagggtata aattttctgg ctgcaagcag acacatataa aacgtcttta ttgatcctac
     3421 ccacataata tggacgcagt cgtaagtgag gctctgtgag cctacccacg taatatggac
     3481 acaggcctaa gcgaggttct ggttttcaaa ttgttccgga ctgaggccac cacaccaacg
     3541 gtgccgtcgc cagcgattgt aatcgcactc gatataatta aacactgttg cccgcactat
     3601 ttcccgatag ataaagtgtt ctccgtggag acattccact taggaacaat tatattgttc
     3661 atggtaatgt ttatatttga gtatagagat taaaatgatt agtcccatca agaatattaa
     3721 gaacgtattt ccaataaata ctgcaaatac tgaatatata gtgagaaata tttatcctag
     3781 agttgaacat ggttacttta atgaatcacc aaacatatat gacaagaagt atatctctgg
     3841 tataaccaga agtatggcac aattaaaaat agaggagttt attaatgaga aatccagacg
     3901 acttaattat atgaagacaa tgtattctcc atgtccggaa gattttcagc ctatttccag
     3961 agacgaagcc agtataccgg aaggaagctg gttgacagtt atatctggaa aacgtcctat
     4021 ggggcaattt tctgtggata gtttgtacca tcctgactta catgcattat gtgagctccc
     4081 agagattagt tgtaagatct tccctaaaga aaatagtgat tttttgtata taattgttgt
     4141 attcagaaat gattctcccc aaggagaact acgggcaaat cggtttatag aactatatga
     4201 tataaaaaga gagattatgc aagtgttaag agatgagtcg ccagagttaa agtctattaa
     4261 atctgagatt attattgctc gtgaaatggg agaacttttt agttatgcat cagaggaaat
     4321 agatagctac ataaaacaaa tgaatgacag gttttctcaa atcaaggctc gaatgtctgt
     4381 tacttaatgt atattaatt
//
LOCUS       DADMIB010000247         4373 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.251, whole genome shotgun sequence.
ACCESSION   DADMIB010000247 DADMIB010000000
VERSION     DADMIB010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4373
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.251"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..100)
                     /locus_tag="JNZ89_004188"
     CDS             complement(<1..100)
                     /locus_tag="JNZ89_004188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase"
                     /protein_id="HAY8937864.1"
                     /translation="MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVE"
     gene            complement(113..1894)
                     /gene="gcl"
                     /locus_tag="JNZ89_004189"
     CDS             complement(113..1894)
                     /gene="gcl"
                     /locus_tag="JNZ89_004189"
                     /EC_number="4.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate carboligase"
                     /protein_id="HAY8937865.1"
                     /translation="MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIR
                     HILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITG
                     QAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLV
                     DLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKTVEMLIQAERPVIVAGGGVINAD
                     AAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFG
                     IGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ
                     EMQKAGRLPCRKEWVADCQQRKRTLLRKTYFDNVPVKPQRVYEEMNKAFGRDVCYVTT
                     IGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQ
                     FLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYG
                     VDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSE
                     LDNVMEFEDIADNAVDAPTETCFMHYE"
     gene            complement(1984..2799)
                     /gene="allR"
                     /locus_tag="JNZ89_004190"
     CDS             complement(1984..2799)
                     /gene="allR"
                     /locus_tag="JNZ89_004190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor AllR"
                     /protein_id="HAY8937866.1"
                     /translation="MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVS
                     DISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVA
                     GPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKAL
                     LYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCI
                     ASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP"
     gene            complement(2877..3359)
                     /gene="allA"
                     /locus_tag="JNZ89_004191"
     CDS             complement(2877..3359)
                     /gene="allA"
                     /locus_tag="JNZ89_004191"
                     /EC_number="4.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ureidoglycolate lyase"
                     /protein_id="HAY8937867.1"
                     /translation="MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALV
                     EILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDL
                     STLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
                     "
     gene            3589..>4373
                     /gene="allS"
                     /locus_tag="JNZ89_004192"
     CDS             3589..>4373
                     /gene="allS"
                     /locus_tag="JNZ89_004192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AllS"
                     /protein_id="HAY8937868.1"
                     /translation="MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENT
                     GVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLL
                     YNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFS
                     LDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQK
                     EIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPT"
BASE COUNT         1118 a         1184 c         1043 g         1028 t
ORIGIN      
        1 attcaacgcc gcgaaaacca cactgcgcag ctttctcaaa acgggcgaga aaatcatatt
       61 caccaaataa catcgataaa ttagcagaga aacgtaacat tatttatctc ccttattcat
      121 agtgcatgaa gcaggtttca gtcggtgcgt ccactgcgtt atcggcgata tcttcaaatt
      181 ccatgacgtt atccagttcg ctgcccatcg aaatattggt cacacgctcg agaataactt
      241 ccacgactac cggtacccga tattgcgcca ttaaggcttt cgcctgttca aaggctggcg
      301 caatatcttc cggtttgaag acgcgaatcg ctttacaacc taaaccttcc gctactttta
      361 cgtggtcgac gccgtaaccg ttcacttcgc tggagttgat attctcgaaa gcgagttgca
      421 cgcagtagtc catgtcaaag gcgcgttgtg actgacgaat caggccgaga taggcgttat
      481 tcaccagcac atggatgtac ggaatgttga actgcgcgcc aacggctaac tcttcaatca
      541 ggaactggaa gtcaaagtcg ccagaaatcg ccaccacatt gcgtttcgga tcagcggcac
      601 aaacccctag cgcagccgga atcgtccagc ctaacggacc agcctgacca cagttgatcc
      661 agtggcggtc tttaaagaca tgcagcattt gtgccgcagc gatttgtgac agaccgatgg
      721 tggtgacata acaaacatcg cgaccaaagg ctttgttcat ctcttcatac acgcgctgcg
      781 gtttcaccgg cacgttgtcg aagtaggttt tgcgcagcaa agtgcgtttg cgctgctggc
      841 agtcggcgac ccattcttta cgacacggca gacgacccgc tttttgcatc tcctgcgcca
      901 cttcaaccag cagtgtcagc gccgctttag catcagagac aatgccgaga tccggacaca
      961 gcacgcgacc aatttgcgtc ggctcaatat cgatatgaac gattttgcgc ccttcggtgt
     1021 atttctctac cgaaccagta tgacggttag caaaacggtt accgatacca aacaccatgt
     1081 cggacgccag caacgttgcg ttaccgtaac gatgcgcggt ttgcagaccg accatcccgg
     1141 ccatcagttc atgatcgtcc gggatacagc cccagcccat cagcgttggg atcaccggaa
     1201 cgctggtcag ttcagcaaac tgttgtaaca gtgcagctgc gtcagcattg attaccccgc
     1261 ccccggcaac aatcaccgga cgttcggcct ggattaacat ttctacagtt ttttcgatct
     1321 gcatacggct ggcagcaggt ttgtagaccg gcagcggttc gtacatgtca ggatcaaact
     1381 cgatttccgc aacctgaacg tcgaacggta aatccaccag taccggaccc ggacgaccag
     1441 aacgcatcag gtgaaatgcc tgttgcagca cgcgaggcac cagcgccgct tcacgaactg
     1501 taaccgccat tttgctgacc ggtttagcaa ttgcttcaat atctacggcc tgaaaatctt
     1561 ctttatgcag acgggcgcgc ggtgcctggc cggtaatgca caaaatagga atggaatcag
     1621 cagaagcgga atagagcgcg gtgatcatgt ccgtgcccgc aggaccggaa gtccccagac
     1681 atacgccgat attccctgcc gttgcgcggg tataaccttc cgccatgtgc gaagcacctt
     1741 ccacatgacg cgccagaatg tgacgaatac cgccgtgctt acgcatcgct gagtagaacg
     1801 gattgattgc agctcccgga acaccgaagg cggtggtgat accttctttc tccagcacat
     1861 acattgccgc gtcaacggct ctcatttttg ccattttatt cctatctcta tttattggaa
     1921 aatttttcca actttcaaat tttgtcaaaa aaacccgctc cgcagagcgg gatgcgacag
     1981 acattatgga tgtgctttca gtcccaacgc cgtgctgata tcgcgggcgg tgtctctgac
     2041 cagctcaccc tgactgacaa aacgatcttc tgtcagtctt gatgaaggcc cggagatgga
     2101 gatagcggca acaacgctac cgacatcatc gtaaattgct gaagctatgc aattcagacc
     2161 tacaacatgc tcttctttat ctacggtata gcccagttca cgcgcttgtt ccaggtcctt
     2221 cagcaaggtg ggcatatcca caagcgtagt tggcgtaaac tgctgcaaac cggtttgcag
     2281 aatgatgctc atcaactcct cttccgccag cggataaagc agcgctttgc ccgcaccgga
     2341 agcatgcagc ggcagacgac tgcccagtgg cgcacacatc ctgaccattg atttacactc
     2401 taactgacca attaatactg cttcattgcc gttacggatc gcgacattga ccgtttcgcc
     2461 ggaaagtaac atcaggcggc gcataaacgg cccggcgacg gagaggacat cgcggttatg
     2521 gatgtacgcc gcaccgacgt taaagacacc taatcctata tgccaccagc ctaattgact
     2581 gtcctgatag acaaaatccg ctgcttgtaa aaccttcagc aagcgaaagg tcgtggagag
     2641 cggcaaatcc agattgagag aaatatcgct aaccgacgaa cttcccccac ttttttccag
     2701 atattgcaga atcgcaattc cccgctctaa cgcctgtgcg cccttctgtg ccacaggctc
     2761 cgcctgtcct ggcctgccgc gccgtctaac ttccgtcata cctacgttaa ctccgaccta
     2821 caagtgagca taaacaatga acaattagtt tatcttatgc aagtcggttg caggcgtcac
     2881 gcaaaacaga gttcctgttc aggaatactt tcaacatcac agttgtcact gccgccgcga
     2941 tcgatggtca gaaaatcggt gacgcgctgc caggcgaaaa gtgggtgatg ccagacgtta
     3001 cgatggtaat tcactccctg ttcgccgttg gtgataaacg cccgcagcgt tgacaggtct
     3061 ggtttgtcgt cgcctaacgc cacgaccacc acaaacactt cacctttcat cgggataaag
     3121 gcctgagtgc ccagcggatg acgttcgagt tcgtgaatgg tcagcggcag attcgccggt
     3181 tgcgcgcggt taatgctaat aagcgtacgg tcttgctcaa gaatctcaac cagcgccaaa
     3241 tcgtggtaac gctccaccag gccattgtta atatggaaaa aatcccgttg ctgagtttcg
     3301 attacgtcgc cataagcact aaaggcttcc tgacttaacg gtaatacctg aagtttcatc
     3361 tttttgtcct tgtaacataa ttccgttcaa ccaccgccga ccggtcagct tgggttcaat
     3421 aacaggcaat ctaaaacctt aagagaacaa catcaataca aaagttggaa tatttttcca
     3481 aaactagatt tagtccacaa attgaacagg gttatcatgt aaaaatactg ataaatcaga
     3541 ggataagaaa atcacgcaac ttgcggattt aaaaggggat acctgaagat gttcgatcca
     3601 gaaaccttgc ggactttcat tgcggttgct gaaacaggaa gtttttcaaa agcggcagaa
     3661 cgattatgta aaaccacggc gacgatcagt tatcgcatta aacttctgga agagaatacc
     3721 ggagtagcgc tgtttttccg tacgactcgt agcgtaacgt tgacagcggc tggcgagcat
     3781 ctactttccc aggccagaga ctggctgagc tggctggaaa gtatgcccag cgagctgcaa
     3841 caggtgaatg atggcgtgga acgccaggtg aatattgtca tcaacaacct gctctataac
     3901 ccccaggccg tcgcccagtt gctggcgtgg ctgaatgaac gttacccctt tacccagttt
     3961 cacatctccc gacaaatcta tatgggcgtc tgggactcgc tattgtacga aggtttttcg
     4021 ctggctatcg gcgtcacggg aactgaggcg ctggcaaata cctttagtct tgatccctta
     4081 ggatcggtgc aatggcgatt tgtcatggcg gcggatcatc cgctggcgaa cgttgaagag
     4141 ccgctaacag aagcgcagtt gcgtcgcttt ccggcggtca atattgaaga cagcgcccgc
     4201 accttaacca aacgcgtcgc ctggcgattg ccagggcaaa aagagattat tgttcctgat
     4261 atggaaacga aaatcgccgc ccatctggcg ggcgttggca ttggtttttt gccaaaatcg
     4321 ctttgccagt caatgatcga taatcaacaa ctggtcagcc gggtaatccc aac
//
LOCUS       DADMIB010000248         4320 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.252, whole genome shotgun sequence.
ACCESSION   DADMIB010000248 DADMIB010000000
VERSION     DADMIB010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4320
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.252"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..976)
                     /locus_tag="JNZ89_004193"
     CDS             complement(<1..976)
                     /locus_tag="JNZ89_004193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HAY8937869.1"
                     /translation="MIRKSATGVIVALAVIWGGGIWYTGTQIQPGVEKFIKDFNDAKK
                     KGEHAYDMTLSYKNFDKGFFNSHFQMQISFDNGAPDLNIKPGQKVAFDVDVEHGPLPI
                     TMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
                     AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLTRLE
                     EKKFPVGESESKFNQVNIINQGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLT
                     KGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPELANDEV"
     gene            complement(1131..1757)
                     /gene="dsbA"
                     /locus_tag="JNZ89_004194"
     CDS             complement(1131..1757)
                     /gene="dsbA"
                     /locus_tag="JNZ89_004194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA"
                     /protein_id="HAY8937870.1"
                     /translation="MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEF
                     FSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG
                     VEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKA
                     AADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK"
     gene            complement(1774..2760)
                     /gene="srkA"
                     /locus_tag="JNZ89_004195"
     CDS             complement(1774..2760)
                     /gene="srkA"
                     /locus_tag="JNZ89_004195"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response kinase SrkA"
                     /protein_id="HAY8937871.1"
                     /translation="MNNSAFTFQTLHPDTIMDALFEQGIRVDSGLTPLNSYENRVYQF
                     QDEDRRRIVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFY
                     FAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
                     EDATLIPSGLKAAFLKATDELIAAVTAHWREDSTVLRLHGDCHAGNILWRDGPMFVDL
                     DDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVY
                     YLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY"
     gene            complement(2837..3106)
                     /locus_tag="JNZ89_004196"
     CDS             complement(2837..3106)
                     /locus_tag="JNZ89_004196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HAY8937872.1"
                     /translation="MKCKRLNEVIEFLQPAWQKEPDLNLLQFLQKLAKESGFDGELAD
                     LTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE"
     gene            3176..3760
                     /gene="mobA"
                     /locus_tag="JNZ89_004197"
     CDS             3176..3760
                     /gene="mobA"
                     /locus_tag="JNZ89_004197"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HAY8937873.1"
                     /translation="MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALM
                     TQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDT
                     PYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAF
                     MRLAGGHAVDFSDHKDAFVNVNTPEELARWQEKR"
     gene            3742..4269
                     /gene="mobB"
                     /locus_tag="JNZ89_004198"
     CDS             3742..4269
                     /gene="mobB"
                     /locus_tag="JNZ89_004198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418293.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HAY8937874.1"
                     /translation="MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALYARGIRPGLIKHT
                     HHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKL
                     DLILVEGFKHEEIAKIVLFRDGARHRPEELVIDRHVIAVASDVPLNLDVALLDINDVE
                     GLADFVVEWMQKQNG"
BASE COUNT         1170 a         1021 c          965 g         1164 t
ORIGIN      
        1 caacttcatc gtttgctaac tcagggtgtg cagcaagctg cttctgcatc gcaatgttat
       61 actggatgat aaattggcgc actgctgagg gatcaataga ttcagcaatc aatgaccact
      121 caccactacc gagttgctga ttcccttttg ttaacttatc aagttcgtag gtcagattga
      181 cattgatata atctttgtct ttaacgcgat ccagcctggt ttttgcaacg aaagcatcga
      241 tttgggcaac gtcttccccc tgattgataa tattaacctg attaaatttc gactcgcttt
      301 caccaaccgg aaatttcttt tcttctaatc gtgtcagaga atcaatggta aaactttttg
      361 ccgttacttt gttcattggt gataattgca gaacaatatc ttcgactttg ccttcaatat
      421 ccaggttaga caatgaacta ccatcaccat taaaagtaaa ctggccctca ccaaaagaaa
      481 actttccata ctctgcaggg gcaacatcta atgtcgtaga gaatgagcca ccaaacgcga
      541 atcgcaatgt cgcttccacg ggcgatttat ttttcgcggc gataaatagc ggttgtgtca
      601 gttcattatt cactaagttc acttttgccg ctgccagtgc tgggatgaca ttaccatgca
      661 ttaacattgt gatgggcaac ggaccgtgct caacatccac atcaaatgca actttctggc
      721 ctggcttgat attgagatcg ggtgcaccgt tatcaaatga aatttgcatt tgaaaatggg
      781 aattaaaaaa gcctttgtca aagtttttat aacttaacgt catatcgtag gcatgttcac
      841 ctttcttttt agcatcgtta aaatctttaa taaatttttc gacaccaggc tgaatttgcg
      901 tacctgtgta ccatatgcca ccaccccaga ttacggctaa cgcaacaata acacctgtag
      961 ctgacttacg tatcatataa atattccctg ataaaacagc aaaactttga atatccactt
     1021 atgctgaaat aatgtccagc ggcaggatgt attatcagaa tgtatttata tttattaaat
     1081 aataaaaaaa gcccgtgaat attcacgggc tttatgtaat ttacattgaa ttattttttc
     1141 tcggacagat atttcactgt atcagcatac tgctgaacaa aaacatccat attgctggta
     1201 tccataccct gcggattcag ctgatattta ccgttaacaa acatcgccgg aacaccgcgc
     1261 aattgcacgt cagctgcagc tttttcctgc tgagctacca gagatttcac cacgaagctg
     1321 ttccacgccg cgtcgtactc ttcaccttta atacctgcgt tgataaatac atcgcggata
     1381 tcagaagcag aacgaatggt ctgggttttc tgtacgcctt caaacagcgg aacagtcact
     1441 ttgtcttcca cgcccagcgc catcgccaca gcccatgcct gagtcagatc tttgcccagg
     1501 tcaccaccca tgaagttgac gtggtattta gtcatcttca cgccttccgg cagttttttc
     1561 ttcacattat cagaaatatg cagaacttct tcaaactgat agcagtgcgg acagaagaaa
     1621 gagaaaaact ccagcacttg cggcgcgcca gctaccggtt tttccagggt agtgtactgt
     1681 ttaccatctt catactgcgc cgccgatgcg ctaaacgcta aaactaaacc agccagcgcc
     1741 agccaaatct ttttcatgat ctactctctc cgattaatac ataggtgtta attgtaaagg
     1801 gggttcttgt agaacttttg cctgttctat aaaagtcgcc gtttgtcgca gccagtaatc
     1861 ttccccggtt aaccacggga aatttttcgg gaacgcggga tcagcccaac gccgcattag
     1921 ccaggcaaga taataaacca aacgcatggc gcgtaaaggt tcaatcagtc cgatttcagc
     1981 ggtgtcgaac tcgctaaatt cttcataagc ttcaataata gtttccagtt gcatccgctg
     2041 ctcggcttta tcgccattga gcaacatcca caaatcctga atagctggac cattacgtgc
     2101 atcatccaga tcaacaaaca ttggaccatc gcgccagaga atattcccgg cgtggcagtc
     2161 tccatgtaag cgcagaacgg tggaatcttc ccgccagtgc gctgtaacgg cggcgatcag
     2221 ctcatctgtc gctttcagga atgccgcttt caacccggaa ggtatcagtg tagcgtcctc
     2281 aaacagcttg cgtggctcaa tgagatattc attcagaccg atggtcgggc gatggataaa
     2341 aagctgtttg cgccccgtct ggtgcatacg ccctaaataa cgcccaaccg cttccatctg
     2401 atcgatatta tcagcttcga actggcgacc accgacgctt ggaaaaacag cgaaataaaa
     2461 tccctgatga ttcaataaag tctgaccgtt aaaggccaca ggtgctgcga ccggaacttc
     2521 atcatttacc aactgcaacg caaattgatg ttcttcgagg atttgatcgg ctgtccaacg
     2581 ttcagggcga taaaatttga cgacaatacg tcgacgatct tcgtcctgaa attgatagac
     2641 acggttttca tagctgttaa gcggggtaag accggaatcc acccggatcc cttgctcaaa
     2701 tagagcatcc atgatggtat ccgggtgtag tgtctggaaa gtaaaagcgc tgttgttcat
     2761 cccatcatcc ggaaaacatt acgaatgatg aaggatatca tttcacgatg attttggtgg
     2821 cgccgcttac aagcttttac tctttaatta cgccgcgagc gcgtaacagc gccgttttga
     2881 agtcttcttc ataatctttc tgcaaacccg ggatcaccgc atctttcgcg gaatcacgca
     2941 ttttcaggtg atagatcaga atgtcatccg tcaaatccgc cagttcgccg tcaaaacctg
     3001 actctttcgc cagtttctgc aaaaattgca acaggttaag gtctggctct ttttgccagg
     3061 ctggctggag gaattcaata acttcattca gacgtttaca tttcatagtg atgctcctta
     3121 ctcttgagac agacacgtta gcagggtcaa tcccacaata aaagaggcga tatcggtgaa
     3181 tctgatgacg acgataacag gcgttgtgct ggcaggcggt aaagccagac gaatgggtgg
     3241 cgtagataaa ggattgcttg aattaaacgg caaaccatta tggcaacatg tcgctgacgc
     3301 gcttatgacg cagctctctc acgtcgtggt taatgccaat cgtcatcagg aaatctatca
     3361 ggcaagcggt ctgaaagtga ttgaagattc actggcggat tacccaggcc ctctggcagg
     3421 aatgctttca gtaatgcagc aggaagctgg tgagtggttt ttgttttgcc cgtgcgatac
     3481 gccttacatt ccccctgatt tagcagcccg gcttaatcat cagcgcaaag atgcgcctgt
     3541 cgtgtgggtc catgacggtg aacgcgatca cccgactatt gctctggtaa accgcgctat
     3601 tgagccttta ttactggaat atctgcaagc aggagaacgc cgggtaatgg catttatgcg
     3661 tctggctggc ggtcatgcgg ttgatttcag cgatcataaa gatgcatttg ttaacgtgaa
     3721 tacgccagag gagcttgccc gatggcagga aaaacgatga taccgttact cgcctttgcc
     3781 gcgtggagtg gtaccggaaa aactacgctt ttgaaaaaac tgatcccggc attatacgcc
     3841 agagggatcc gtccagggct gattaagcat acgcaccatg atatggatgt tgataagcca
     3901 ggcaaagata gctatgagct gcgcaaggct ggcgcggcac aaaccatcgt tgccagccag
     3961 caacgatggg ccttgatgac ggaaacacca gacgaagaag agctggatct acagtttctc
     4021 gcaagtcgaa tggatacctc aaagctggat ttgattctgg tcgaagggtt taagcatgaa
     4081 gagatcgcaa agattgtgct gtttcgcgat ggagccagac atcgacctga agaattagtg
     4141 atagacaggc atgttattgc tgtagccagt gatgtgccgc ttaatcttga tgtcgcatta
     4201 ctggatatta atgatgttga ggggctggct gattttgtgg tggagtggat gcaaaagcag
     4261 aacggataag caagagtagg ctggatcaga cgcagccagt gtcgcatccg acctttttct
//
LOCUS       DADMIB010000249         4267 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.255, whole genome shotgun sequence.
ACCESSION   DADMIB010000249 DADMIB010000000
VERSION     DADMIB010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4267
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.255"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(43..213)
                     /locus_tag="JNZ89_004199"
                     /pseudo
     CDS             complement(43..213)
                     /locus_tag="JNZ89_004199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
     gene            523..2295
                     /gene="aspS"
                     /locus_tag="JNZ89_004200"
     CDS             523..2295
                     /gene="aspS"
                     /locus_tag="JNZ89_004200"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HAY8937875.1"
                     /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
                     VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII
                     NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
                     ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
                     EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
                     RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI
                     DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMI
                     FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP
                     FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE
                     EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
                     APSFANPTALAELSIQVVKKAENN"
     gene            2413..2865
                     /gene="nudB"
                     /locus_tag="JNZ89_004201"
     CDS             2413..2865
                     /gene="nudB"
                     /locus_tag="JNZ89_004201"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HAY8937876.1"
                     /translation="MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVE
                     EGETAPQAAMREVKEEVTIDVVAEQLTLIDSQRTVEFEIFSHLRHRYAPGVTRNTESW
                     FCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA"
     gene            2894..3634
                     /locus_tag="JNZ89_004202"
     CDS             2894..3634
                     /locus_tag="JNZ89_004202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY8937877.1"
                     /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD
                     ANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECL
                     SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAE
                     DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMR
                     LIDMLEDCDDVQEVYHNGEISDEIAATL"
     gene            3669..4190
                     /gene="ruvC"
                     /locus_tag="JNZ89_004203"
     CDS             3669..4190
                     /gene="ruvC"
                     /locus_tag="JNZ89_004203"
                     /EC_number="3.1.22.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005068993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HAY8937878.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSR
                     LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
                     AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
                     SESRLNLARGRLR"
BASE COUNT         1053 a         1058 c         1199 g          957 t
ORIGIN      
        1 atcaaccggc tgttttaatg cttcggcgta atcggcagat cagccaactc gcaccagaaa
       61 cacgggctga ccgctggcgc gaaatttcgc cgccagcttc ccggcgcgat taactacctc
      121 atcggcagta tgtggaccac cggcaaaagg taagatgcct tcttgtaaat cgatcaccac
      181 caacgcagtg gttttagcat taagttcaag catgctgact cctgaaaaaa caaaatcgtg
      241 cctcacacct taatgcgatt agccgatggc ggaacgacaa attttgttaa tttttatgag
      301 ttcgggcaac acctttatag caaactggcg tagagtctga tttcaggccc gatataaagt
      361 ggtaacgagg cgttccagcg cgggctaggc tcttacggtg cggcagaatt tccagtataa
      421 tagccgcctt ttttcattca gttgtgacat acagctaacg ctgcgacttg gtcacctgcg
      481 cagcaggggg catccgccgg cagctaagtt aagggatatc tcatgcgtac agaatattgt
      541 ggacagctcc gtttgtccca cgtggggcag caggtgactc tgtgtggttg ggtcaaccgt
      601 cgtcgtgatc ttggtagcct gatcttcatc gatatgcgcg accgcgaagg tatcgtgcag
      661 gtatttttcg atccggatcg tgcggacgcg ttaaagctgg cctctgaact gcgtaatgag
      721 ttctgcattc aggtcacggg caccgtacgt gcgcgtgacg aaaaaaatat taaccgcgat
      781 atggcgaccg gcgaaatcga agtgctggcg tcctcgctga ctatcatcaa ccgcgcagat
      841 gttctgccgc ttgactctaa ccacgtcaac accgaagaag cgcgtctgaa ataccgctac
      901 ctcgacctgc gtcgtccgga aatggctcag cgcctgaaaa cccgcgctaa aatcaccagc
      961 ctggtgcgcc gttttatgga tgaccacggc ttcctcgaca tcgaaactcc gatgctgacc
     1021 aaagccacgc cggaaggcgc gcgtgactac ctggtgcctt ctcgtgtgca caaaggtaaa
     1081 ttctacgcac tgccgcaatc cccacagttg ttcaaacagc tgctgatgat gtccggtttt
     1141 gaccgttact atcagatcgt taaatgcttc cgtgacgaag acctgcgcgc tgatcgtcag
     1201 cctgagttta ctcagatcga tgtggaaact tctttcatga ccgcgccgca agtgcgtgaa
     1261 gtgatggaag cgctggtgcg tcatttgtgg ctggaagtga agggcgtgga tctgggcgat
     1321 ttcccggtaa tgacctttgc ggaagcagaa cgccgttatg gttctgataa accggatctg
     1381 cgtaacccga tggaactgac cgacgttgcc gatctgctga aatctgttga gtttgcagta
     1441 tttgcggggc cggcgaacga tccgaaaggc cgtgttgccg ctctacgtgt tccgggtggc
     1501 gcatcgctga cccgtaagca gatcgacgaa tacggtaact tcgttaaaat ctacggcgcg
     1561 aaaggtctgg cttacatcaa agttaacgaa cgcgcgaaag gtctggaagg tatcaacagc
     1621 ccggtagcga agttccttaa tgcagaaatc atcgaagcca tcctggatcg tactgccgcg
     1681 caagatggcg atatgatttt cttcggtgcc gacaacaaga aaattgttgc cgacgcgatg
     1741 ggcgcactgc gcctgaaagt gggtaaagac cttggtctga ccgacgaaag caaatgggca
     1801 ccgctgtggg ttattgactt cccgatgttt gaagacgacg gtgaaggcgg cctgacggca
     1861 atgcaccatc cgttcacctc accgaaagac atgactgctg cagaactgaa agctgcaccg
     1921 gaaaatgcgg tggcgaacgc ttacgatatg gtcatcaatg gttacgaagt gggcggtggt
     1981 tcagtacgta tccataatgg tgatatgcag cagacggtgt ttggtattct gggtatcaac
     2041 gaagaggaac agcgcgagaa attcggcttc ctgctcgacg ccctgaaata cggtactccg
     2101 ccgcacgcag gtctggcatt cggtcttgac cgtctgacca tgctgctgac tggcaccgac
     2161 aatatccgtg acgttatcgc cttcccgaaa accacggcgg cagcgtgtct gatgactgaa
     2221 gcaccgagct ttgctaaccc gactgcactg gctgagctga gcattcaggt tgtgaagaag
     2281 gcagagaata actgatatga ctcaaataca cgaaatcatt cgcgttgcat caaggcggca
     2341 attgagtgaa ctcccatgag catagataac tatgtgaatg ggatgagcga aggcagtcaa
     2401 cgaagaggca gcgtgaagga taaagtgtat aagcgtcccg tttcgatctt agtggtcatc
     2461 tatgcacaag atacgaaacg ggtgctgatg ttgcagcggc gtgacgatcc cgatttctgg
     2521 cagtcggtaa ccggcagcgt ggaagagggt gaaaccgcgc cgcaagctgc catgcgcgaa
     2581 gtaaaggaag aggtcaccat tgatgttgtc gctgaacaac tgaccttaat tgacagtcag
     2641 cgcacggtag agtttgaaat tttttcacat ttacgtcatc gctatgcgcc gggcgtgacg
     2701 cgtaatacgg aatcatggtt ctgtcttgcg cttccgcacg agcggcagat cgttttcact
     2761 gaacatctgg cttacaagtg gcttgatgcg cctgctgcgg cggcgctcac taagtcctgg
     2821 agcaaccggc aggcgattga acagtttgta attaacgctg cctgaacagg cagggctatc
     2881 tggagatatt tttatggcag gtcatagtaa atgggccaac accagacatc gtaaagctgc
     2941 gcaggatgct aagcgcggta aaatcttcac taaaatcatt cgtgagctgg taaccgcggc
     3001 taagctgggc ggtggcgatc cggacgctaa cccgcgtctg cgtgcggcgg tggataaagc
     3061 actgtctaac aacatgaccc gtgacacact gaaccgcgca attgcacgtg gtgtgggcgg
     3121 tgatgatgat gcaaacatgg aaaccatcat ctacgaaggt tacggtcctg gcggcacggc
     3181 aatcatgatt gaatgtctgt ctgacaaccg caaccgtacc gttgctgaag tgcgtcatgc
     3241 attcagcaaa tgtggcggta acctcggtac agatggttcc gtagcctatc tgttcagcaa
     3301 aaaaggcgtg atctccttcg agaaaggcga tgaagacacc atcatggaag cagctctgga
     3361 agcaggtgct gaagacgttg tgacctatga tgacggcgcg attgatgtct acactgcatg
     3421 ggaagaaatg ggtaaagtgc gcgacgctct ggaagcggca ggtctgaaag cagacagcgc
     3481 ggaagtttcc atgatcccgt ccaccaaagc tgatatggat gcagaaaccg caccgaaact
     3541 gatgcgtctg atcgatatgc tggaagattg cgacgacgtg caggaagttt accataacgg
     3601 tgaaatctct gatgagattg cagcgactct ctgatgaggc ctgctaaaca gcaaaacgga
     3661 gacgcgtgat ggctattatt ctcggcattg acccgggttc gcgcgtgacc ggctatggcg
     3721 tcatccgcca ggtaggcagg caactgtcct acctgggtag cggatgcata cgcaccaagg
     3781 tggatgattt accgtctcgt ctgaagctca tctatgcggg cgtgacggaa atcatcaccc
     3841 agttccagcc agattatttc gccattgaac aagtctttat ggccaaaaat gccgactcgg
     3901 ctctgaaact ggggcaggcg cgcggcgtgg cgattgtggc ggcggtgaat caggaattgc
     3961 cggtatttga atatgcggca cgtcaggtaa agcaaacggt ggtaggtatt ggtagtgccg
     4021 aaaaaagtca ggtgcagcat atggtccgca ccttgctgaa actgcccgct aatccacagg
     4081 cggatgccgc cgatgcgtta gctatcgcga ttacccattg tcacgtcagc cagaatgcaa
     4141 tgcagatgag cgaatcgcgg ctgaacctgg cgagagggcg actgcgttaa gttataccgc
     4201 ctcggtcagt tcaggctgag gcgtttcaac tccctccgcg tgaatcaaca ccaaacccgg
     4261 atgatgc
//
LOCUS       DADMIB010000250         4231 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.256, whole genome shotgun sequence.
ACCESSION   DADMIB010000250 DADMIB010000000
VERSION     DADMIB010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4231
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.256"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..197)
                     /locus_tag="JNZ89_004204"
     CDS             complement(<1..197)
                     /locus_tag="JNZ89_004204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706235.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937879.1"
                     /translation="MGNYIRPLSDAVFTIASDDQWIESLAIQQLHTTANLPNMQRVVG
                     MPDLHPGRGYPIGAAFFSVGR"
     gene            complement(443..895)
                     /locus_tag="JNZ89_004205"
     CDS             complement(443..895)
                     /locus_tag="JNZ89_004205"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8937880.1"
                     /translation="MNNIQIRDYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQI
                     DESRWKEKLAKSQVRVAVINAKLVGFITCVEHYIDMLFVDPEYTRRGVASALLKPLIK
                     SESELTVDASITAKPFFERYGFQTVKQQRVECRGEWFINFYMRYKQQH"
     gene            complement(892..1956)
                     /gene="dinB"
                     /locus_tag="JNZ89_004206"
     CDS             complement(892..1956)
                     /gene="dinB"
                     /locus_tag="JNZ89_004206"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HAY8937881.1"
                     /translation="MYKKVKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVI
                     STANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEP
                     LSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNK
                     PNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRF
                     GKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERR
                     LAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRL
                     VGLHVTLLDPQMERQLVLGL"
     gene            complement(2003..2773)
                     /locus_tag="JNZ89_004207"
     CDS             complement(2003..2773)
                     /locus_tag="JNZ89_004207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000640586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937882.1"
                     /translation="MIYSNQLRYTGKDGVYFHLRDNVDAFLTLSATENMEFDSPMQVT
                     TQNMQSGQTVTDNVQRAPRTITISGVVVVGESGSILISRDTKLVENFIDTLENWRDQK
                     QIISVICKDGIKIDDSIITSFKASKDVGISNGLRIQLTFQEINFKAIVGQTDISAATG
                     KTATTNDGGATSKKNTGNTTTSLGSPMLTCKELFSYSASELSDEALKARVTCSKSVSV
                     KNGESTFTASANEQASKVLKSGNALRKYSVNPNKKGTY"
     gene            complement(2931..>4231)
                     /locus_tag="JNZ89_004208"
     CDS             complement(2931..>4231)
                     /locus_tag="JNZ89_004208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001130996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HAY8937883.1"
                     /translation="GLDIAELQSQFAGFGASAKESMGIQGSEELFRNMIGYSRLMGRS
                     EEEIKRALTALSQMAGKGQIMAEELKGQLAEAVPGMVQVFAKATGKSEQELFDAMKKG
                     ALKSADTLQKVTQELNKQITAKGGWKAISESTQAQLGNLKNSWNTTLDSIFRGSENGL
                     QDFTRSLTTLLNSLGGSGKSLGESLGSLMTSMSSGVDSLTDISYRVRAFFDEVTLAYR
                     GLTDEQKKVVDALGSGLINSLKVLAGVIAVNKVVGVTRSIYGLMTAITRLGQVADTTA
                     DNVNRKNGKPSRLNPMKMLLAGSAIYAGYERLASTPERMEAQAKLPELAKESGLKPAF
                     TMDDVKGWFNSAAMNLANFQHPELNNIKQDSALTSADVQSLRDEISALSKRIQEPVKV
                     SLGGEVAIKPDETSFMTFSSNIYDQYAEATLLSSSFPEDD"
BASE COUNT         1133 a         1006 c          873 g         1219 t
ORIGIN      
        1 aaacgaccaa cagagaagaa cgctgcgcca atcggatagc cgcgtccggg atgtaaatct
       61 ggcatcccca ctacgcgctg catgttgggt aaatttgccg tggtgtgtaa ttgttggatc
      121 gctaaactct cgatccactg gtcatcagat gcgatggtaa ataccgcatc ggataaggga
      181 cgaatataat tgcccatata ccattccgta aatagactcg tcatacttca agttgcatgt
      241 gttgcgactt gaattattga gagtaacaat taaaaaatca ggaaatggca gacgaatcca
      301 gggcaagaaa aaaataatta atcctggaaa ggtctgcaaa gagtcattga taaaggattt
      361 gtcatgattt acctccttgc agtttgtgga ataagaaaac gcgcacatac taggcttgcg
      421 ttattttcat tgcaagctgg atttaatgtt gctgtttata acgcatataa aaattaataa
      481 accactctcc ccgacattca acgcgttgct gcttaactgt ctgaaaacca taacgttcaa
      541 aaaagggttt tgcggttatg cttgcgtcca ccgtaagttc ggattcagac ttaatcaaag
      601 gttttaacaa agcgctggca accccacggc gggtgtattc agggtcaaca aataacatat
      661 cgatatagtg ttcaacgcag gtaataaagc cgaccagttt tgcattaatg actgcaaccc
      721 gcacttgtga tttcgcgagt ttctccttcc agcgagattc gtcaatctgc gcccaggcgg
      781 caatttgttg tggtgaataa tgctgactgg cagtcatcgt aaccgctcta atgaaaatag
      841 cgcatagttg ctgaaaatcg ccaggctgat agtctcttat ttgtatgtta ttcataatcc
      901 cagcacgagt tgtctttcca tttgcgggtc aagcaacgtc acatgcagcc ccaccagtcg
      961 cacaccgcgc ccgccgcggc gttcatccca ggttttacgc gcggtggcga ttaagtcagc
     1021 tttattcagc cgcggccaga cgtgctcctg agtggtttgc tgaaaatcat caaactttaa
     1081 tttcaccccc tggcgagcaa tcagtaaatc aggtttcacc tttgccagac ggcgttcaag
     1141 ttccggatac agccgctcga taatcgcttc acattcagac cagtggtgga tatcttccgc
     1201 catcgtgcgt tccacgccga cggattttcg caaccgttcg ctgttaacgt cgcgctcgtc
     1261 aatcccctga ctacgctccc acaaaatgcg gccaaatttg ccaaagcgtt taagcagcat
     1321 caccagatca cacttttgta catcaccgca ggttcgtagc cccatcgctt ccagttttgc
     1381 cgccgagact ttgccgacgc cggggatttt tgccagtggt aaggtttgta aaaatgccgg
     1441 aacttctgcc ggcgtaatca caaactggcc gttgggttta ttcatgtcgg aggcgatttt
     1501 ggcgagaaac tttacgggtg ccacgcccgc agacgccgtc agttgcagct cgttgaaaat
     1561 cgtctggcgg atttcctggg cgatgagggt cgcagaaccg tggcaatgga cgctatcggt
     1621 gacgtcgaga taagcctcat ccagtgacaa cggttcaata cgcgaggtgt agcgcgagaa
     1681 gatttcgcgg atatgatttg aggcttcttt gtaggcgtca aagcgccccg gaagcaaggt
     1741 gagatgcggg cataatttga gcgccatccc tgtcggcata gcgctacgta cgccaaattt
     1801 acgcgcggga taattggcgg tactgatcac cccccgacgt tcgcggctgc cgccaatagc
     1861 aatagggata tcgcgcaggg cgggattgtc gcgcatctcc accgccgcga aaaagcagtc
     1921 catatccaca tgaataatct tcactttctt atacaccctg tatatttata catgcaaaga
     1981 gattatacac acaaaagcaa aatcaataag tgcccttctt attcggattc acagagtact
     2041 tccgtaaagc attacccgac ttaagcacct ttgaagcttg ctcattagct gaggctgtga
     2101 aggtgctctc accattttta acgctaacgc tcttagagca cgttacacgg gcttttagcg
     2161 cttcatctga taactcactt gccgaatagc taaaaagctc tttacaggtc agcatagggc
     2221 ttccaaggct cgttgtagtg ttgccagtat tctttttact ggtagcacca ccatcattcg
     2281 tggtagcagt cttgccagtt gcagccgaaa tatcagtctg acccacaata gctttgaagt
     2341 taatttcctg aaaagttagc tggattctta gaccatttga aataccaaca tctttagagg
     2401 ctttaaagct cgtgataatg gaatcatcaa ttttaattcc gtctttacag atgaccgaaa
     2461 taatctgctt ctggtcacgc cagttttcca gagtgtcgat gaagttctcc accagcttag
     2521 tatctcgtga gataaggata ctaccggatt caccaactac aacgacacca ctaatagtga
     2581 ttgttctggg tgctctttgc acattatctg tgacggtttg ccctgattgc atgttctgtg
     2641 tagtcacctg catagggctg tcaaattcca tgttttcagt tgctgataag gttaagaagg
     2701 catctacatt atctcttaag tggaagtaaa cgccatcttt gccagtgtaa cgaagttgat
     2761 tagagtaaat cattaaattc tcctttgatt tcaaaggctt agtgtatttt aatcattttt
     2821 aaccaaacct ttgatatata agtattttct ctgttaagcg tgagctacgt gaaaaataat
     2881 ttttggtgtg ggtattaact ttgctttatt cacgtagcat tcgactatta ttaatcatct
     2941 tctgggaatg atgaacttaa tagcgtagct tctgcatatt ggtcgtagat attactgcta
     3001 aaggtcataa agctggtttc atctggttta atggcaactt caccaccaag tgaaactttc
     3061 acaggctcct gaatacgttt gctcaaagcg gagatttcat ctctcaggct ttggacatct
     3121 gcactcgtta atgctgaatc ttgcttaatg ttgtttaatt ctggatgctg gaagttagca
     3181 agattcatag cagcactatt aaaccaccct ttaacatcat ccatagtgaa agcgggttta
     3241 agtccagact ctttagccag ctctggtaat ttagcttgtg cttccattcg ttcaggtgta
     3301 gaagctaatc tttcataacc tgcatagata gcactaccag ctaatagcat cttcataggg
     3361 tttagtcttg atggtttccc attctttcta ttcacgttat ccgctgtagt atcagctacc
     3421 tgacctaatc ttgtgatagc agtcataagc ccgtaaatac ttctggttac accaacaact
     3481 ttattcacag caataacacc agccaagact tttaaactat taatcaagcc agaacctaaa
     3541 gcatcaacaa ctttcttttg ttcatcggtt aaaccacgat aagctaatgt cacctcatca
     3601 aagaatgctc tcactctgta actgatatcg gtcaggctat ccacaccact tgacatagaa
     3661 gtcatcaagc taccaagaga ttcaccaaga ctcttaccac ttccacctaa actgtttaaa
     3721 agcgttgtta ggcttcgtgt aaaatcttgc agaccatttt cagaacctct gaagatacta
     3781 tcaagcgtgg tattccaaga gtttttcagg ttccccagtt gtgcttgtgt gctttctgaa
     3841 atagctttcc agccaccttt agctgtgatt tgtttattca gttcctgagt gaccttctga
     3901 agagtatcgg cagattttaa agcccccttc ttcatggcat caaataattc ctgttcactc
     3961 tttccggttg ctttagcgaa tacctgaacc ataccaggaa cagcttcagc tagttgcccc
     4021 ttaagctctt cagccataat ctgaccctta ccagccatct gtgataatgc tgtcagtgct
     4081 cgcttaatct cttcctcact tcgacccatt aaacgagaat agccaatcat atttctaaaa
     4141 agctcttcag aaccttgaat acccatagac tctttagctg aagcaccaaa accagcaaac
     4201 tgtgattgca gttcagcgat atctaaaccc g
//
LOCUS       DADMIB010000251         4183 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.257, whole genome shotgun sequence.
ACCESSION   DADMIB010000251 DADMIB010000000
VERSION     DADMIB010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4183
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.257"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..209)
                     /locus_tag="JNZ89_004209"
     CDS             complement(<1..209)
                     /locus_tag="JNZ89_004209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY8937884.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVE"
     gene            complement(324..399)
                     /locus_tag="JNZ89_004210"
     tRNA            complement(324..399)
                     /locus_tag="JNZ89_004210"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(364..366),aa:Thr,seq:ggt)
     gene            complement(406..480)
                     /locus_tag="JNZ89_004211"
     tRNA            complement(406..480)
                     /locus_tag="JNZ89_004211"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(445..447),aa:Gly,seq:tcc)
     gene            complement(597..681)
                     /locus_tag="JNZ89_004212"
     tRNA            complement(597..681)
                     /locus_tag="JNZ89_004212"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(645..647),aa:Tyr,seq:gta)
     gene            complement(690..765)
                     /locus_tag="JNZ89_004213"
     tRNA            complement(690..765)
                     /locus_tag="JNZ89_004213"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(730..732),aa:Thr,seq:tgt)
     gene            1127..2077
                     /gene="coaA"
                     /locus_tag="JNZ89_004214"
                     /gene_synonym="panK"
     CDS             1127..2077
                     /gene="coaA"
                     /locus_tag="JNZ89_004214"
                     /gene_synonym="panK"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HAY8937885.1"
                     /translation="MSIKEQTLMTPYLQFDRNQWAAQRDSVPMTLSEDEIARLKGINE
                     DLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKS
                     TTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFV
                     SDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVF
                     VSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMT
                     LWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK"
     gene            complement(2106..3071)
                     /gene="birA"
                     /locus_tag="JNZ89_004215"
     CDS             complement(2106..3071)
                     /gene="birA"
                     /locus_tag="JNZ89_004215"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HAY8937886.1"
                     /translation="MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLR
                     DWGVDVFTVPGKGYSLPEPIQLLNAEQILGQLDGGSVAVLPVIDSTNQYLLDRIGELK
                     SGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEV
                     LRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESV
                     VNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPV
                     KLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRSAEK"
     gene            complement(3068..4096)
                     /gene="murB"
                     /locus_tag="JNZ89_004216"
     CDS             complement(3068..4096)
                     /gene="murB"
                     /locus_tag="JNZ89_004216"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HAY8937887.1"
                     /translation="MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVL
                     ILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMP
                     GLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRD
                     SIFKHEYQDRFAIVAVGLRLLKEWQPVLTYGDLTRLDPTTVTPQQVFNVVCHMRTTKL
                     PDPKVNGNAGSFFKNPVVSAETAKALLAQFPTAPNYPQAGGSVKLAAGWLIDQCQLKG
                     MQMGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGE
                     VSAVETIS"
BASE COUNT         1079 a         1041 c          932 g         1131 t
ORIGIN      
        1 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
       61 atctggtcga atgcgcgagc agcaccgccg taggttttag ccagtacggt agtgattgca
      121 gcggtcagcg ttgttttacc atggtcaacg tggccgatag taccgacgtt aacgtgcggt
      181 tttgtacgtt caaacttttc tttagacatc gattgtccct ctaagacacg gataaatcgg
      241 tgatatcacc acatcaacca ggcaacatgc ccgacttgtt gaatgcaata aacagaagga
      301 aaaaacaggg aggagaaaag aagtggtgct gataggcaga ttcgaactgc cgacctcacc
      361 cttaccaagg gtgcgctcta ccaactgagc tatatcagca catcttggag cgggcagcgg
      421 gaatcgaacc cgcatcatca gcttggaagg ctgaggtaat agccattata cgatgcccgc
      481 atcctggaac tcggctacct gattttcatt ctgcactgaa tatcgagaga agctctcttt
      541 attcgagccg gtaagcgaac ttatcgtctc gggctacgcc atcgcgtggc cgaaattggt
      601 ggtgggggaa ggattcgaac cttcgaagtc tgtgacggca gatttacagt ctgctccctt
      661 tggccgctcg ggaaccccac cggacttgat ggtgccgact accggaatcg aactggtgac
      721 ctactgatta caagtcagtt gctctaccta ctgagctaag tcggcatcaa gtagcgcgca
      781 ttctatggag acatgcgagt tcatgcaact aaaaaattgc ataatttgtt ttattggtca
      841 cattttatgc gacacgatga agaaacagcc gaatggaggg cagattagca cactttttca
      901 acatcattgt gctcaacaat gcgctcctgc taaaccataa ttcttcttat cagatggaat
      961 atctgtcaca ttgcttttca acgatagctt cctaggagag attttttctt attattcctc
     1021 cccatctggt gttaccctcc tgcccattaa cccattcaac agaactgtga cgcgccatgg
     1081 caaatatcgc tttgccgata gagctatgac cgccagaaac atgcttatga gtataaaaga
     1141 gcaaacgtta atgacgcctt acctacagtt tgaccgcaac cagtgggcag ctcagcgtga
     1201 ttccgtacct atgacgttat cggaagatga gatcgcccgt ctcaaaggta ttaatgaaga
     1261 tctctcgtta gaagaagttg ccgagatcta tttacctctg tcacgtttgc tgaacttcta
     1321 tataagctcg aatctgcgcc gtcaggcagt tctggaacag tttcttggta ccaacgggca
     1381 acgcattcct tacattatca gtattgctgg tagtgtcgcg gtggggaaaa gtacaaccgc
     1441 ccgtgtattg caggcgctat taagccgttg gccggaacat cgtcgtgttg aactgatcac
     1501 tacagatggc ttccttcacc ctaatcaggt tctgaaagaa cgtggtctga tgaagaagaa
     1561 aggcttcccg gaatcgtatg atatgcatcg cctggtgaag tttgtttccg atctcaagtc
     1621 cggcgtgcca aacgttacag cccctgttta ctcgcatctt atttatgatg tgatcccgga
     1681 tggagataaa actgttgttc agcctgatat tttaattctt gaagggttaa atgtcttaca
     1741 gagcggaatg gattatccac acgatccaca tcatgtattt gtttctgatt ttgtcgattt
     1801 ttcgatatat gttgatgcac cggaagactt acttcagacg tggtatatca accgtttcct
     1861 gaaattccgc gaaggggctt ttaccgaccc ggattcctat tttcataact acgcgaaatt
     1921 aactaaagaa gaagcgatta agactgccat gacattgtgg aaagagatca actggctgaa
     1981 cttaaagcaa aatattctac ctactcgtga gcgcgccagt ttaatcctga cgaaaagtgc
     2041 taatcatgcg gtagaagagg tcagactacg caaataattt gcaggggagc gaatactccc
     2101 ctttcttatt tttctgcact acgcagggat atttcaccgc ccatccaggg ttttattatt
     2161 ccatcctgct caagtaataa agccccctgt ttgtctattc cgcgtgaaat gccaaatatt
     2221 tctttatcac caatgataag tttcactggg cgattaataa aattatccag cttttcccag
     2281 cgcgacagat aaggtgccaa tccttcttgt tcgaagagtt ccaacgcagc acgtaattca
     2341 cgtattagca tggccgccaa cgtattacga tcgagattga tccccgcttc ctgcagcgtg
     2401 atccacccct gattaacgac actctcttca acacggcgca ttgccatgtt gatcccggct
     2461 ccaatgacta tttgcgccgc atcgccagtt ttgccagtca gctccacaag aatgcctgcc
     2521 agcttgcgat cctgcagata gaggtcatta ggccatttga cacgaacttt atctgctccc
     2581 agcttgcgta atacttccgc catcacgata ccgataacca gacttaaacc aatcgccgcc
     2641 gccgggcctt gttccagacg ccagaacatc gacaaatata agtttgcgcc aaaaggcgaa
     2701 aaccatttcc gcccccggcg accacggcca gcctgctggt attctgcaac acaggcatcg
     2761 cccgatttaa gctctccgat acgatcaaga aggtactgat tcgtggagtc aataactggc
     2821 agcacggcta cactaccgcc atccagctga cccaatatct gttcagcatt aagtaactgg
     2881 atgggctcag gcaggctgta tcctttaccc ggaacggtaa agacatcaac gccccagtca
     2941 cgcagtgtct gaatgtgttt attaatagcc gcccggctca ttcccagcgt ttcacccaac
     3001 tgctcgccag agtgaaattc accgttcgct aacagggcaa tcaatttcag tggcacggtg
     3061 ttatccttca tgaaattgtc tccactgcgc tcacttcacc tgatgcacca ataaagcgga
     3121 cttcaggctc aagccagaca ttaaattttt cacccacttt ttgtcttaca tggtgtgcca
     3181 gttgcaccac atcttcgctt tttgcattgt cttcattaat gagaactaac gcctgttgac
     3241 ggtgcaccgc agccccaccc atttgcatcc cttttagctg gcactgatca ataagccaac
     3301 ctgctgccag ttttactgaa ccacccgcct gggggtaatt tggtgctgtt ggaaattgcg
     3361 ccagtaatgc tttagccgtt tcggcagata caacagggtt tttgaagaaa ctaccggcat
     3421 tgccattcac ttttggatca gggagtttgg tggtgcgcat atgacacacc acattaaata
     3481 cttgctgtgg cgttactgtt gtaggatcca gacgagttaa gtcaccatac gttagtacag
     3541 gttgccactc ttttagcaga cgcagaccta cggctacaat ggcgaagcga tcctggtatt
     3601 catgtttaaa aatactgtcg cgatagccaa aacggcactc tttggcagtt aagcgcactt
     3661 gcttgcctgt cgccagttca acacaatcaa cataagcgca aactcgctgt aattctacgc
     3721 cataagcacc aatattctgg ataggtgatg agccgacaca accaggaatt aatgccagat
     3781 tttccagacc aggcatacct tcctgcaaag tgtattttac caggcgatgc cagttttctc
     3841 cggctcctac atgtaaatac cacgcatcag gttcatcatg aatttcgata cctttgatcc
     3901 ggttgatgat caccgtgccg cgatagtctt ccagaaaaag tacattactt ccttcaccca
     3961 gaataagaac gggttgtcct tctgcggttg catactgcca ggcattgagt aattgttgtt
     4021 cgtcttcggc acatacaatg tgctgagcat tatgatcaat gccaaatgtg ttccagggtt
     4081 ttaaggagtg gttcatagct gctttcctga tgcaaaaacg aggctagttt accgtatctg
     4141 tggggggatg gcttgtagtt atgacgacag ggagagtttg tag
//
LOCUS       DADMIB010000252         4080 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.258, whole genome shotgun sequence.
ACCESSION   DADMIB010000252 DADMIB010000000
VERSION     DADMIB010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4080
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.258"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            32..931
                     /locus_tag="JNZ89_004217"
     CDS             32..931
                     /locus_tag="JNZ89_004217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8937888.1"
                     /translation="MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEE
                     RLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSALASLSELQNRPSGTIRITTVE
                     HAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRI
                     GPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVR
                     MEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYY
                     PHRRHAGSAFSLFIDRLKYKGAV"
     gene            1268..2881
                     /locus_tag="JNZ89_004218"
     CDS             1268..2881
                     /locus_tag="JNZ89_004218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415845.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY8937889.1"
                     /translation="MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDE
                     PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNA
                     KWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTA
                     VDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERV
                     VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL
                     LKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPA
                     WHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQ
                     KIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLL
                     TSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMKQAPIAPIYQYTNG
                     RLIKPWLKGYPINNPEDVAYSRIMYIVKH"
     gene            complement(2932..3963)
                     /gene="ynaI"
                     /locus_tag="JNZ89_004219"
     CDS             complement(2932..3963)
                     /gene="ynaI"
                     /locus_tag="JNZ89_004219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low conductance mechanosensitive channel YnaI"
                     /protein_id="HAY8937890.1"
                     /translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA
                     VQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFE
                     KQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
                     KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPN
                     SLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLV
                     YFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMD
                     NITPPEQGR"
BASE COUNT         1146 a          895 c          960 g         1079 t
ORIGIN      
        1 aaatgattaa tagattgcat ggagatactg aatgaagcgt gaagaaatcg ctgatctgat
       61 ggcgtttgtc gtcgttgcag aggagcgtag cttcactcgt gcagcagccc gcctgagcat
      121 ggcgcagtca gctttaagcc agatagtgcg tcgtatagaa gaacgattgg gattgcggct
      181 tctgacgcga accacgcgca gcgttgttcc aactgaagcg ggcgagcatc ttttgtctgt
      241 tcttggccct atgttgcatg acatagattc agccctggca tccctgagcg agctgcagaa
      301 ccgcccatcc gggacaatac gtattactac tgtagaacat gcagcaaaaa cgatattgtt
      361 accagcaatg cgcacattcc tgaaatcgca tcctgaaatt gatattcagc tcaccattga
      421 ttatggtttg accgatgtcg tttctgaacg ttttgatgca ggcgtccgtc tgggtgggga
      481 gatggataaa gatatgatcg ccattcgaat cgggccagat ataccaatgg ctattgttgg
      541 ctcaccggat tatttttctc gccgaagtgt tccaacgtca gtgtcacaat taatagatca
      601 tcaggcaatt aatttgtatc ttcccacatc gggtacagca aatcgctgga gattaatacg
      661 cggtggacgt gaagttcgtg ttcgcatgga aggtcagctt ttactgaata cgatagacct
      721 gatcattgat gctgcaattg atgggcatgg attggcgtat ctaccttatg atcaggttga
      781 gcgggctatt aaagaaaaaa aactgatacg tgttttggat aaattcacac cagatttacc
      841 cggttatcac ctgtactatc cacaccgtcg acatgctggc tcggcattct cattatttat
      901 agataggctg aagtataaag gtgctgttta gcactacttg ctgatacatt aatttaattt
      961 ctctcttaac gtattctcag ttcctttcaa cgttttggtt attttttatt cttcgtacaa
     1021 tggcgacaga tgctgatttt gataccgaaa actggtttga acgtgcgaag cctgaacgta
     1081 gtattcggtg ttctatgtgc tttgccgcat tttggcgtcg attatttaca ctaaatctga
     1141 tttaatatat tgatacataa aacattttat gcttcctgtg tcactttttt gatggaagtt
     1201 gtttgcattt ctttaaggcg aaacaaataa ttacgcatca attttaatgt cggttagagg
     1261 gaaacttatg aagcactctg tttcagtcac gtgttgtgcg ctgttggtca gcagcatttc
     1321 tctttcgtat gctgcagaag ttccgagcgg cacagtactg gcagagaagc aggagctggt
     1381 gcgccacatt aaagatgagc ctgcgtcgct ggatcccgct aaagccgtgg gcctgccaga
     1441 gattcaggtc attcgcgatc tgtttgaagg actggtgaat cagaacgaga aaggggagat
     1501 tgtccccggc gttgcgactc agtggaaaag taatgacaac cgtatctgga cttttaccct
     1561 gcgcgataac gcaaaatggg cggatggcac accggtaacg gcgcaagatt ttgtctacag
     1621 ctggcagcgt ctggtggacc cgaaaacgct atcgccattt gcatggtttg ccgcgctggc
     1681 gggaatcaac aacgcacagg cgattattga tggtaaagct acgcctgacc agcttggcgt
     1741 caccgcagtt gatgcccata ccttgaaaat tcagcttgat aaaccgttgc cgtggtttgt
     1801 gaatttaacc gctaactttg ccttcttccc ggtgcaaaaa gccaacgtag aaagcggtaa
     1861 agagtggacg aaacccggaa atctgatcgg caatggcgct tatgttctta aagaacgcgt
     1921 agtcaatgaa aaactggtcg tggtaccgaa tacccattat tgggataacg ccaaaacggt
     1981 actgcaaaaa gtgaccttcc tgccaattaa tcaggaatcc gcagccacta agcgttacct
     2041 cgcgggggat attgatatca ccgaatcctt cccgaaaaat atgtatcaga agctgttgaa
     2101 ggatattccg gggcaggttt atacgccgcc gcagctcggg acctattatt atgcgtttaa
     2161 cacgcaaaaa gggccgacgg cagatcagcg cgttcgcctg gcattaagta tgacgataga
     2221 tcgccgcctg atgaccgaaa aagtgttggg aacgggcgaa aagccagcgt ggcattttac
     2281 accagatgtt accgccggat ttacgccgga accttcgccg tttgaacaaa tgagtcagga
     2341 agaactgaat gcgcaggcaa aaactttgtt gagcgcagct ggttatggtc cgcaaaaacc
     2401 gctgaagctg acgcttttgt ataacacttc agaaaaccat caaaaaattg cgattgctgt
     2461 agcatcgatg tggaaaaaga accttggcgt agatgttaaa ttgcaaaatc aggaatggaa
     2521 aacctatatc gatagccgta acaccggcaa ttttgatgtt atccgcgcct catgggtggg
     2581 ggattataat gaaccctcca ctttcctgac attattaacg tcaacgcatt caggaaatat
     2641 ttcacgcttt aacaatccgg catacgacaa agttctggcc caggcatcga cggaaaatac
     2701 cgttaaagcg cgtaatgccg attacaacgc ggcagaaaaa atcctcatga agcaagcacc
     2761 gattgcacca atttatcaat ataccaatgg acgattaatc aagccgtggc tgaaaggtta
     2821 tcctattaat aacccggaag atgtggcgta cagccggatt atgtatattg tgaagcattg
     2881 atgtgatggg aactggcgtt acccttgtgg ataacgccag tgatgtctga tttagcgccc
     2941 ctgttccggc ggtgtaatgt tatccatata cagcgtctgg ctggggaagg caaagtccgc
     3001 gccgtgtgac tgcacaatat cgataatctt caaataaacg tcttgttgtg cagcaagcca
     3061 ttcagcccat accgtggttt tggtaaagca ataaaccata atattcaatg acgagtcggc
     3121 aaactggttg aaataaacca gtaaggtttg tcgctggtcg atggccgggt gatttttcag
     3181 catctcacgt acggcttcga caataacgcc cacttttgcc gcatcctcat aacgtaaacc
     3241 aatggtcgtg gtaatgcggc ggttggtcat tcgtcctggg ttttctacgc tgatcgacga
     3301 aaacagcgag ttcggtacgt acaatggacg attatcaaag gtcgtaattt tggtaattcg
     3361 ccagccaatt tccgctactg taccttcgat atttctgtcc ggtgaacgga tccagtcgcc
     3421 aatactgaaa ggacggtcga aatagagcat gatcccggaa aagaaattac tcagaatatc
     3481 tttaccggcc ataccgacag ccagaccacc aataccacca aaggtcagca agccagaaag
     3541 gctcatgccg aaatgttcgc cataaagcag aacaagcacc acaataatgg tgattttgat
     3601 aatgcgcgac ataatccgcg cactggtgat atcgcgacct tttttaatct gctgtttttc
     3661 aaactgatta atcagcaaaa atagcttaat cgtcagaata accgcaatca gggacgtaca
     3721 gataaaatcg ataacgcctg gggtgataaa tttgagttta tagttttcta taacataatt
     3781 aataatgcta ccaacagcac tgataattat ggtgtagatt aaaaattgca ccgcatggaa
     3841 taaaaaacct tttcttttac gatttccgcg gcgaaaccaa aagctcatca gaatcaatgc
     3901 tgcgcagcta ccgaaaataa tgaccagatt aagcgcatta tttgtaaaca gttcagcgat
     3961 cattgtttta tcaggctcct ccagataatt gtcgtcatgc cggaaccccc tggcggggct
     4021 attttaccgc gacaattcat tcagatcatc aatagtcagg gaaggaagta gcaacattag
//
LOCUS       DADMIB010000253         4078 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.259, whole genome shotgun sequence.
ACCESSION   DADMIB010000253 DADMIB010000000
VERSION     DADMIB010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4078
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.259"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..1046)
                     /locus_tag="JNZ89_004220"
     CDS             complement(<1..1046)
                     /locus_tag="JNZ89_004220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein"
                     /protein_id="HAY8937891.1"
                     /translation="MREINMLRNISSCLFPHISTITSPNHYLSEWDDWEKQGLPEEQR
                     TEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKEL
                     IARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLK
                     KLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLSNLPNIQEN
                     IIMRRFFYFENNQITTIPTNLFRLDPHITIEIANNPLSDQTLLFLIQQTSVPNFNGPQ
                     FRISLSDQNRLFLRQMLPQNLHSRHIRVITEGGQNFQIPPLPETVAAWFPEADRREVS
                     TQWTSFSTEENSRA"
     gene            1537..1647
                     /locus_tag="JNZ89_004221"
     CDS             1537..1647
                     /locus_tag="JNZ89_004221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA invertase"
                     /protein_id="HAY8937892.1"
                     /translation="MLIGYVRVSTNDQNTDLRRNALNCAGYELIVERMGA"
     gene            1927..2922
                     /gene="pgl"
                     /locus_tag="JNZ89_004222"
     CDS             1927..2922
                     /gene="pgl"
                     /locus_tag="JNZ89_004222"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HAY8937893.1"
                     /translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS
                     PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN
                     AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG
                     HLVAQDPAEVTTIEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL
                     DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ
                     PRGFNVDHSGKYLIAAGQKSHLISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH"
     gene            complement(2963..3915)
                     /locus_tag="JNZ89_004223"
                     /pseudo
     CDS             complement(2963..3915)
                     /locus_tag="JNZ89_004223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308823.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
BASE COUNT         1093 a          829 c          957 g         1199 t
ORIGIN      
        1 aatgcccggg aattctcctc ggtggaaaaa gaagtccatt gtgtagaaac ctcccgacga
       61 tctgcttcag gaaaccaggc tgccacagtt tcgggaagag gggggatctg aaagttctgc
      121 cccccttcag tgatgactct gatatggcgc gaatgtaaat tttgcggcaa catctggcgt
      181 aaaaacagtc tgttttggtc tgacagggaa atacgaaact gaggcccgtt aaaatttgga
      241 accgaagttt gctgtattaa gaatagcaga gtttgatctg ataaggggtt atttgcaatc
      301 tcaatagtta tatgaggatc taaacgaaaa agatttgtcg ggattgtagt tatttggttg
      361 ttttcaaaat aaaaaaatct tctcatgata atattttctt ggatgtttgg taagttgctt
      421 aatctattgc tatatgcaaa aagaagttgc agtctcctag gtaaaggggg cagttcagta
      481 agatggttgt gcgcaacctt aagtatctta agattagaag gcagagatgg aagagtttgc
      541 agttcgttgt tcctaacctc aagttttttt aaattcaagg gtaatgaagg cagtgtggat
      601 aacctattat actctgcgct tagtgatttg atggtgtctg gtaataacgg cagattctct
      661 aattgatttt cggacacatc caaagttatt agataatgtg gtaatgcaga tatatgtgtt
      721 aagaaattat ctcttgcaat aagttcttta atattttcag gtaaatcagt aaggatggtt
      781 aatttattac agctcacatc aagcttttta atgcaagcag ggagtacagg taacgaggaa
      841 agcgccaagg ctcgcaggtc cagtttatgc cccttagagg taagacatgc acgaagtctt
      901 cttaccgcct cagtacgctg ttcttccggt aacccctgtt tctcccaatc atcccattcg
      961 gacaaataat ggttggggga tgtaattgtg ctgatatgtg gaaataaaca ggatgaaata
     1021 tttctgagca tattaatttc tcgcatatgg atatggaatt agattgtgaa taaattgtat
     1081 ttaatgtatc tctcctaatg aggagggtgt ttcagaatat tcgccataag ggaatgagtg
     1141 ttatatcatg ctttctatcc tggtaagtat atttgctttt ttcgtatatt tggttcatct
     1201 ttttttgatg ttttacatat tcacaatgca gaggatttat accagaagac attagtcttg
     1261 agtaagatac tacaacatct ccaactattt tagccagcct gactacttga cttggtaata
     1321 tttgttgcta ataatcatgt ataaaataag cttatataca tagtaacttc agcaaaggat
     1381 ttagtaatga tccaaatcat atatcaatgt actgtttttt tctttaaaaa aacagtacat
     1441 tctattttat aatgactgtg tattcccatg gaaggagatc acccaattct cccccccgac
     1501 ttttgacgca gtgtcttgtt aacaggggga tttaccatgc ttattggcta tgtacgcgta
     1561 tcaacaaatg accagaacac cgatctacga cgtaatgcgt tgaactgtgc aggatatgag
     1621 ctgattgttg agcgaatggg agcttgattg gaagttgtta gggtatggtg tttacggtcg
     1681 ttgatatggc gaacaaacgc ggggagcgtc acgctcccta aatggtcgcg aaaatatctg
     1741 tggcattgtc aaatttgtga cggtgactaa tattttaatg atatgccatt cgaaatggtg
     1801 tgctaacgta ttgatttaat tgtgacgcga tgttgtattt tatcgcgttt tgttgtctgt
     1861 ttttcattcg cttgatgttg ctatttacat gaaaaataaa gaatttattg tttttgaggt
     1921 gtgtttatga agcaaacagt ttatatcgcc agccctgaga gccagcaaat tcacgtctgg
     1981 aacctgaatc atgaaggcgc actgacgctg acacaggttg tcgatgtgcc ggggcaggtg
     2041 cagccgatgg tggtcagccc ggacaaacgt tatctctatg ttggtgttcg ccctgagttt
     2101 cgcgtcctgg cgtatcgtat tgccccggac gatggcgcac tgacctttgc cgcagagtct
     2161 gcgctgccgg gtagtccgac gcatatttcc accgatcacc aggggcagtt tgtctttgta
     2221 ggttcttaca atgcgggtaa cgtgagcgta acgcgtctgg aagatggcct gccagtgggc
     2281 gtcgtcgatg tggtcgaggg gctggacggt tgccattccg ccaatatctc accggacaac
     2341 cgtacgctgt gggttccggc attaaagcag gatcgcattt gcctgtttac ggtcagcgat
     2401 gatggtcatc tggtggcgca ggaccctgcg gaagtgacta ccattgaagg ggccggcccg
     2461 cgtcatatgg tattccatcc aaacgaacaa tatgcgtatt gcgtcaatga gttaaacagc
     2521 tcagtggatg tctgggaact gaaagatccg cacggtaata tcgaatgtgt ccagacgctg
     2581 gatatgatgc cggaaaactt ctccgacacc cgttgggcgg ctgatattca tatcaccccg
     2641 gatggtcgcc atttatacgc ctgcgaccgt accgccagcc tgattaccgt tttcagcgtt
     2701 tcggaagatg gcagtgtgtt gagtaaagaa ggcttccagc caacggaaac ccagccgcgc
     2761 ggcttcaatg ttgatcacag cggcaagtat ctgattgccg ccgggcaaaa atctcatctc
     2821 atctcggtat acgaaattgt tggcgagcag ggactactgc atgaaaaagg ccgttatgcg
     2881 gtcgggcagg gaccaatgtg ggtggtggtt aacgcacact aaccgctgat ttaaccggcg
     2941 cagtctctcc tgcgccggtg tattaaccta tctcctgtaa cgcatgtctc tggcgttcga
     3001 cgatattggt ccacaaattg tctttatcgt cagtccacaa attaatcagc aaggcaaaaa
     3061 agcgttcagc tgccggagaa agcacggcat ctttgcggcg aataatcccc aatgtccgac
     3121 gtataacggg ttccaccagt gggataccaa taatcgaaga atagggcgca tggggcattg
     3181 ccagaccagg aagcgccgaa atccccagtc ctgcctccac tagtcctaat gacgtcgaaa
     3241 gatgacgcac ttcgtaaaac cagtccagct tccagggctt gtcggccagc tgttgttcta
     3301 tcaacagtcg gttgccgctg gaggagcgta cgccaatcat tttgtaaccc actaactcct
     3361 gccattctac aagctgcttt ttggccaatg gatggtcacg ccgacaggca gcacgaacgg
     3421 ctcgttgacc agtggggtaa aatcaatgga tgaatttgtg acgttgttca tgtttatgcc
     3481 aaagtctgat tcgttacaca gcaccgattc catgcaatta ttcgtgcctt gttccagaat
     3541 ccgcacttta atattgggat acagctcatt aaatttaccg attgccagcg gtaaaaaata
     3601 aaatactgcg gtcggaatac acgctaacgt caccatacca cgatgataag cattcatatc
     3661 acgaatatta aaaagcgttt catcgaattt ctttattaat tcccgcgcct ccgggagcaa
     3721 cctttttcct gcttttgtta acgtaacctt gcgagttgta cgctcaaata gttgaatatg
     3781 taaatcttcc tccatctttt ttattcttcg cgttaatgca ggttgcgtaa tattgagtaa
     3841 tttagcggca ttgttaaacg aactggactc tgccagtatg acaaatgcct tcatacttga
     3901 taattcatgc ttcattatta ctccggaaaa tggaagcgac gattttgggt ggctggccgt
     3961 taaaaatttt aactgcattt agccaactta aattaatgaa aaaatgttat taatcgttga
     4021 gctaaagtca ttagagatgc tttgccctta atgtaaccat atcgcaataa gggtaatg
//
LOCUS       DADMIB010000254         4076 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.260, whole genome shotgun sequence.
ACCESSION   DADMIB010000254 DADMIB010000000
VERSION     DADMIB010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4076
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.260"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            88..270
                     /locus_tag="JNZ89_004224"
     CDS             88..270
                     /locus_tag="JNZ89_004224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937894.1"
                     /translation="MHQPVKQLIARKFGLSCGFAMSIDTEKIKVRFSQINAGDFLFRH
                     GIPLTFVVKVYPSWRN"
     gene            complement(475..1455)
                     /locus_tag="JNZ89_004225"
     CDS             complement(475..1455)
                     /locus_tag="JNZ89_004225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HAY8937895.1"
                     /translation="MENRKHRPTIGRTLNTNILNNTEEISAPVHVFTLNTGRKAKFTE
                     IKVDHDKVDTQTFVVEEVNGREQTALTPDSLKDITRTIRLQQFYPCIGIRTGDLIEIL
                     DGSRRRAAALLCKVGLRVLVTDDELTVSEAQHLAKDLQTSLEHNIREIGLRLVRLKEA
                     GMNQKQIAEREGLSAAKVTRALQAASVPKDFVSLFPVQSELTYADYRQLAELSERLRL
                     GDISIDEVVKNISPSIELITADDNLSEDEVKNSIMRLITKEMSSLLDSGVKDKAVVTL
                     LWKFDSKDKFARKRVKGRTFSYEFGRLPLEVQDKLDRMIALVLKDNLNSL"
     gene            complement(1455..2654)
                     /locus_tag="JNZ89_004226"
     CDS             complement(1455..2654)
                     /locus_tag="JNZ89_004226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HAY8937896.1"
                     /translation="MTSFEQLSKVAQRADKMLLALTKQIQEQKQEFQADVFYQVYSKS
                     AVAKLPKLTRASVDGAVGEMEAQGYQFEKRPAGTATKYALTIQNIIDIYAHRGIPKYR
                     DRYSEAYSIFIGSLKGGVSKTVSSVSVAHALRAHPHLLSEDLRILLLDLDPQSSATMF
                     LNYLHAVGLVDTTAPQAMLQNVSREELLEDFIVPSVIPGVYVMPASIDDAFIASNWDT
                     LCEEHLLGQNKHAILRENIIDKLKHDFDFILIDTGPHLDAFLKNAIAAADIMFTPVPP
                     AQVDFHSTLKYLARLPELVQIIEQDGCSCRLQANIGFMSKLANKSDHKYCHSLTKEIF
                     GGDMLDVSMPRLDGFERSGESFDTVISANPVTYVGSGEALKNARMAAEDFAKAVFDRI
                     EFIRANY"
     gene            complement(2976..3314)
                     /locus_tag="JNZ89_004227"
                     /pseudo
     CDS             complement(2976..3314)
                     /locus_tag="JNZ89_004227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(3381..>4076)
                     /locus_tag="JNZ89_004228"
     CDS             complement(3381..>4076)
                     /locus_tag="JNZ89_004228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY8937897.1"
                     /translation="SQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVK
                     TFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAG
                     IQVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQKEAKLFFQ
                     VIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLGRILHHSHVVQIKGESYRLRQ
                     KRKAGVIAEANPE"
BASE COUNT         1093 a          957 c          882 g         1144 t
ORIGIN      
        1 tattacatca tggtcgagtt tcctgatttc ccgggcccag taatgagatg ccccgccagc
       61 ctccatcgca acagtcattt taggctgttg caccagccag ttaagcagtt gattgcgaga
      121 aagtttggtc tttcctgcgg gtttgccatg agcattgata ctgaaaagat aaaagttcgt
      181 tttagccaga tcaatgccgg tgattttctg ttcagacatg gtatcccgct tacttttgtg
      241 gttaaagttt atccatcatg gcgcaattga aggctgccgt gaaagagggg gaagactatc
      301 tcatcggtta ctgttaaacg gctaagagaa actatctttt tcaagcaaag aagatacggt
      361 gaaacaggcg atttcaccgt gaaatactgt tcaaaaaaaa cgctaataaa agcaaaattt
      421 cttttaaaac agccaattaa aaactggtga gttgctggcg aaaaacttga attttcacag
      481 cgaattcaga ttatctttta gtacaagagc aatcatacga tctaacttat cctgaacttc
      541 caacggtaat ctgccgaatt catatgagaa cgtacgtccc tttactcgtt ttcgagcaaa
      601 tttatcttta ctatcaaatt tccataacaa agttacaacc gctttatcct ttactcctga
      661 atcaagcaat gaagacattt ccttggttat aagccgcata atactgtttt taacctcgtc
      721 ttcagaaaga ttgtcatcag cagtaataag ctcaatactc ggcgagatat tcttcacaac
      781 ttcatcaata gatatatcac ccagcctcag tcgttcactt aattcagcca gttgcctgta
      841 atcggcgtat gtcagctcag actgaacagg aaaaagagac acaaaatctt taggtacgga
      901 cgctgcttgg agggcacgag tcaccttagc tgccgacaat ccctctcttt ctgcaatttg
      961 cttctggttc ataccggcct ctttgagacg tactaaacgc aacccaattt cacgaatatt
     1021 atgttcaagt gacgtctgca aatctttcgc cagatgctga gcttcagaaa cagtaagctc
     1081 atcatccgtt acaagtacac gtaatccaac cttgcatagc aaagctgctg cccgacgacg
     1141 ggaaccatcc aaaatctcaa taagatcgcc agtccgaatc ccaatacatg gatagaattg
     1201 ttgtaaacgt atagttctgg tgatgtcttt tagtgagtcc ggcgtcaggg ctgtctgttc
     1261 gcggccattc acctcttcaa ccacaaaagt ttgagtgtcc actttgtcat gatcaacctt
     1321 gatctcagta aattttgcct ttcggccagt attgagggta aatacatgaa ctggagccga
     1381 tatttcttca gtattattca ggatatttgt attcagcgta cggccaatag tcggtcggtg
     1441 ctttctgttt tccatcagta gttggccctt ataaattcaa tacgatcaaa aactgcttta
     1501 gcgaaatctt ctgctgccat acgtgcattt ttcaaagctt caccactgcc aacataagta
     1561 acaggattcg cagatatcac ggtatcaaac gactcgccgc ttctctcaaa accatcaaga
     1621 cgtggcattg aaacatcaag catgtcacca ccgaaaatct cttttgtcag gctatggcag
     1681 tatttatgat ctgacttatt cgccagtttc gacatgaagc caatatttgc ctgcaaacgg
     1741 catgaacatc catcctgttc aataatctgt acaagttcag gtaaacgagc caaatattta
     1801 agcgtggaat ggaaatcaac ttgtgctggc ggcaccggtg taaacatgat atctgcggca
     1861 gcaatggcat ttttcaaaaa tgcgtccaga tgcgggcctg tatcaataag gatgaagtcg
     1921 aaatcatgct tcagcttatc aataatattc tcacgcaata tcgcgtgttt gttttgtcct
     1981 aatagatgct cctcgcacag agtatcccag tttgatgcaa taaaggcgtc gtcaatagaa
     2041 gccggcataa cataaacgcc agggataact gacggaacga taaaatcttc cagtaattcc
     2101 tcacgactca cgttctgcaa catagcctgc ggtgcggttg tatcaaccag ccccaccgca
     2161 tgcaagtagt tcagaaacat agtggctgat gactggggat ctaaatcaag gagcagaata
     2221 cgtaaatctt ctgacagcag gtgaggatga gcacgcaggg cgtgagctac ggaaacacta
     2281 ctcacggttt tagacacacc gccttttaga ctaccgatga atatggaata tgcctcacta
     2341 taacgatcgc gatatttagg aatgccacga tgtgcataga tatcgataat gttctggatg
     2401 gttaatgcat attttgtcgc ggttcctgct gggcgttttt caaactgata gccctgagcc
     2461 tccatctcac cgactgcacc atccacgctt gcgcgcgtta attttggaag cttagctaca
     2521 gcagactttg aatagacttg ataaaaaaca tcagcctgaa actcctgctt ttgctcctga
     2581 atctgttttg ttagggcgag caacatttta tctgcacgct gcgcaacctt acttaactgc
     2641 tcaaaactag tcattccccc tccgtgctat gtaggttttt aacttattac aaaaaaaact
     2701 gcattagcag ggtaatgcat gcaagtgcat attgtacatg cttatattaa aaatgcgcgc
     2761 attgctgatt tattaatcat cggaatgaat attactgtaa gatagtatgc ctttccggga
     2821 gaaagacgct gatttccccc gaataatcca gttcaccacc acactccgga caacagcttt
     2881 cttcaggctc cagatggtgt atttcgcggg aaacatgttc cggtaacgga cggcgatgac
     2941 gtgactgtcg caacaggcgg gggtagtgct tccaatcagt agaacatgtg cttttcaatg
     3001 aaggagccga tgactttttc gtggatttcc acggaacgcg agaagcagat tgttttacgt
     3061 gccagccgct tgatgcgggt gcggagggtc cggttgttac gttcaatacg ttgcgtgaag
     3121 attttgccgg tcaggtgttt ctccttcggc acttctctgg cgtagctgcc ccagtcatcg
     3181 ctggtcacca tgccgataca gaacggagtc aacagggcta acagttcccg acaggtctca
     3241 tcattccgtg gcccgaaagt gtaagccaac acaccgccag ttttagtgtt gtacgcatac
     3301 cagagccagt gttgtgtcaa cgacggatga aaagtgatcc acttatatct ccaccaacgg
     3361 cccaatattg atccaccgtt ttactcagga ttagcttctg ctataacccc ggcctttcgt
     3421 ttctgtctga gtcgatagct ttctcctttg atttgaacga catgtgagtg gtgtaagata
     3481 cggcccagca tcgctgaggt cagtgctgca tcaccggcga acgtttgatc ccactgcccg
     3541 aacggtagat tggatgtcag gatcattgcg ctcttttcat aacgtttagc gatgacctgg
     3601 aagaacagtt ttgcttcttt ctgactgaac ggcagatagc ctatttcatc aatgatgagc
     3661 aggcgggggg ccattactcc acgctgaagc gtcgttttat aacggccctg acgttgtgcc
     3721 gtagataact gaagtaacag atctgctgct gttgtgaagc gaacttggat acctgcacgg
     3781 actgcttcat agcccatcgc gattgccaga tgggttttcc ccacacctga tggccccagt
     3841 aatacgatat tttcattacg ttctatgaag ctgagtgagc gtaacgactg gagttgcttc
     3901 tgcggtgctc cggtggcgaa tgtgaagtca tactcttcga acgttttcac cgccgggaag
     3961 gctgccattc gggtatacat cgcctgttta cgttgatgac gtgccagttt ttcttcatga
     4021 agcagatgct ccaggaagtc catataactc cattcctggt ctactgcctg ttgtga
//
LOCUS       DADMIB010000255         4071 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.261, whole genome shotgun sequence.
ACCESSION   DADMIB010000255 DADMIB010000000
VERSION     DADMIB010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4071
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.261"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            113..616
                     /gene="yeaK"
                     /locus_tag="JNZ89_004229"
     CDS             113..616
                     /gene="yeaK"
                     /locus_tag="JNZ89_004229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mischarged aminoacyl-tRNA deacylase"
                     /protein_id="HAY8937898.1"
                     /translation="MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRG
                     TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL
                     TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL
                     VNFRRTA"
     gene            complement(617..721)
                     /locus_tag="JNZ89_004230"
     CDS             complement(617..721)
                     /locus_tag="JNZ89_004230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416302.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937899.1"
                     /translation="MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG"
     gene            890..1336
                     /locus_tag="JNZ89_004231"
     CDS             890..1336
                     /locus_tag="JNZ89_004231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HAY8937900.1"
                     /translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP
                     WIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG
                     VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ"
     gene            complement(1293..2114)
                     /locus_tag="JNZ89_004232"
     CDS             complement(1293..2114)
                     /locus_tag="JNZ89_004232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8937901.1"
                     /translation="MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLI
                     LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTC
                     CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKI
                     RTMVEMMAKGPVEWGSLGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG
                     LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAGLTTVSPQSAKPDPRQ"
     gene            2211..3407
                     /gene="nimT"
                     /locus_tag="JNZ89_004233"
     CDS             2211..3407
                     /gene="nimT"
                     /locus_tag="JNZ89_004233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005117270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-nitroimidazole transporter"
                     /protein_id="HAY8937902.1"
                     /translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY
                     SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY
                     LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA
                     LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL
                     FLGSNSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQ
                     RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAA
                     ALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEI
                     RSYPVL"
     gene            3447..3794
                     /locus_tag="JNZ89_004234"
     CDS             3447..3794
                     /locus_tag="JNZ89_004234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HAY8937903.1"
                     /translation="MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEI
                     TPSTELRKAFHGEVVDFTTFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQ
                     NHALVLADWLRSL"
     gene            complement(3816..4070)
                     /gene="yoaF"
                     /locus_tag="JNZ89_004235"
     CDS             complement(3816..4070)
                     /gene="yoaF"
                     /locus_tag="JNZ89_004235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing lipoprotein YoaF"
                     /protein_id="HAY8937904.1"
                     /translation="MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQK
                     GGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK"
BASE COUNT          937 a         1041 c         1024 g         1069 t
ORIGIN      
        1 acatgatgcg tataaagctt ccgatgagcg tttatatgtc aataagcaga acaaaaacag
       61 ccgttcatga taaccttctg tggttgtttg cttgtaatct caggagcgtg aaatgactga
      121 aatggctaaa ggaagcgtga cgcatcagcg gttaatcgct ttattatcac aagaaggtgc
      181 taacttccgc gtcgttaccc atgaagcggt aggtaaatgt gaagcggtgt cagaaattcg
      241 tggcaccgct ttaggccagg gagctaaggc actggtatgt aaagtcaaag gcaatggcgt
      301 aaatcaacat gttctggcga tcctcgctgc cgatcaacag gccgatctga gccaacttgc
      361 cagccatata ggcggattac gcgcttcgtt agccagccct gctgaagtcg atgaactcac
      421 aggctgtgtc ttcggcgcga tccccccttt cagcttccat ccaaaactca aactggttgc
      481 cgaccctcta ctcttcgaac gatttgatga aatcgccttc aatgcaggga tgctggataa
      541 atccgttatt ttgaaaacca cggattattt gcgcattgcg caaccagaac tggtcaattt
      601 ccgccgcact gcgtaactag cctgtccgtt caataagcag aacggacaaa accagcacaa
      661 cagcaatggc aaaaaacgat gacgtgataa tcagtgtctc gacgaacatt tgatcgttca
      721 tagcatgccc ccgggagata gctgttttca cgttattgtt agcgtgcaca aatggcagtt
      781 tgatgacagt tcgcctgatt tttatgcaaa aaacgtaaag attttctact tccttcctgc
      841 agcaagcgta aagtaagcag gcttattatt ttttggcaag gaaaccacga tgtttgatgt
      901 cactttgctg atcctgctcg ggttagctgc gctgggcttt atcagtcata acaccactgt
      961 cgccgtttca attctggtgt tgatcattgt ccgcgtcaca ccgttaagca cctttttccc
     1021 gtggattgaa aaacaggggc taagtatcgg gataatcatt ctgacgattg gcgttatggc
     1081 ccccatcgcc agcgggacgc taccgccctc aaccttgatt cactcgtttc tgaactggaa
     1141 atcgctggtg gcaattgcag taggcgtgat tgtctcctgg ctgggtgggc gcggcgtgac
     1201 cttaatgggc agccagccgc aactggtcgc cgggctgctg gtaggcactg ttttaggcgt
     1261 ggcgctgttt cgcggcgtac cggtcggccc gcttattgcc gcgggtctgg tttcgctgat
     1321 tgtggggaaa cagtagttaa tcccgcaata tatcggcctg gcgtttgccc caggcctttc
     1381 ttaaacatag taataaaggc cgttgttgaa tcatacccca gcgtatgagc aactttctgt
     1441 acagtatcgc ctttcactaa tccctgaagt gccataatca gctgtaactg ctgacgccac
     1501 tggcgaaaac tcaaccccgt ctcttttacg atcagtcgcg caagattgcg ttcactcatc
     1561 gcaaaaaagc cagcccattg ccctaatgac ccccactcga cgggcccttt cgccatcatc
     1621 tccaccatcg tgcggatttt aggatgagaa gaaacgggca ggtgcagctg ttgttgtggc
     1681 tgctgaggga gttcatcaaa caggacctgt attaatctgc gggtcatcgg ctcagcacgc
     1741 tgagtcgtcg tcctgtttgc cagggttaaa atcaattccc ggcataaggg cgatattttc
     1801 aatgtgcaac atgttgtcgg cattgtcact gcgctgggtt cgataaacag aaaacagagt
     1861 tcagcgttag ctgtcacttg attgctatgt tccaccccgc ccggtatcca aaccgcatat
     1921 tgcggcggca ccatccacaa agcattttcc accgtacagg taattgcacc atgtaatgct
     1981 agtatcagct gtcctttgcg gtgctgatgt acaggactgg ttaactcatc cgttccggcg
     2041 tgaatacaaa atgcgaccgc ggcttcatgg tgtcggtcgg gttcatagcc attgagattc
     2101 aacctgtgca tcattttgtc cgaatttagc gataatttgt cattttagct tgattcaaca
     2161 taacaataaa aacggtaagg tacagcctcg tttgtaacaa tgagaagcat atgacctgtt
     2221 caacttcatt aagcggcaaa aacaggattg tccttatcgc tggcattctg atgattgcca
     2281 caacattacg cgtcaccttt accggcgcag caccgttact ggatacgatt cgttccgctt
     2341 actcgctgac gacagcgcaa accggcttat tgaccaccct gccattattg gcctttgcgc
     2401 taatctcacc tttggccgcc ccggtagcgc gacgttttgg tatggaacgt agcctgtttg
     2461 ccgcgttact tttgatctgt gctggtatcg caattcgctc tctcccttcg ccttacttat
     2521 tatttggcgg tacagcggtc attggcggtg ggattgcatt aggcaatgtc ttactgccag
     2581 gattaattaa acgcgatttc cctcattccg tcgccagact taccggcgca tattccctga
     2641 caatgggagc tgcggcggca cttggatcgg ctatggtagt gccgctggct ttgaacggtt
     2701 ttggctggca aggcgcgttg ctcatgctga tgtgttttcc tctgctggct ctttttttat
     2761 ggctgccaca gtggcgaagc caacaacatg caaatttgag tacctcgcgc gccttacata
     2821 ctcggggtat ctggcgttcg ccgcttgcct ggcaggtcac attgtttctt gggagcaact
     2881 cactggtcta ttacgtgatt attggctggc ttccggcgat cctcatcagt cacggctata
     2941 gcgaagcaca ggcgggttca ctgcatggtt tgctgcaact agccacagca gctcccggtt
     3001 tgctgatccc tcttttctta catcatgtga aagaccagcg tggtattgca gcgttcgttg
     3061 ccttgatgtg cgcagtgggc gctgttgggc tctgctttat gccagcgcac gcgatcacct
     3121 ggactctgct tttcggtttt ggttccggcg caacaatgat actggggttg acgttcattg
     3181 gtcttcgggc aagttctgcg catcaggcgg cggcactctc ggggatggca caatccgtcg
     3241 ggtatttgct ggcagcctgt gggccgccgc taatgggtaa aatacacgat gctaacggta
     3301 actggtccgt accactgatg ggtgttgcaa tactttcact actgatggcg attttcggac
     3361 tttgcgccgg gagagacaaa gaaattcgct catatccggt gctatagtga cgtgacaaat
     3421 catgcgtgaa agggagaaca aacacgatga atattcagtg caaacgcgtt tatgatccgg
     3481 ctgaacagag cgatggttat cgcgtactgg tcgaccgcct ctggccgcgc ggtatcaaaa
     3541 aaaccgattt agcccttgat gagtgggata aagaaatcac gccgtcaacg gaactgcgca
     3601 aagcctttca cggcgaagtc gtcgatttta caacctttcg cgagcaatat cttgcagaac
     3661 tggcgcaaca cgagcaagaa ggaaagcggc tggcggacat cgccaaaaaa cagccgctga
     3721 ccctgctcta cgcagcaaaa aacaccacgc agaaccatgc gctggtgctg gccgactggc
     3781 tacgtagctt gtgattttag tacagcatcc ggcggttatt tttcaccagc cggatggtcc
     3841 cgtcgccaca atgcccattc atcaatcgtt tcaccgcccg gtaatttgca attgttgctg
     3901 accccttgcg ctgtcgacac tggaatgagc gtcccgccct tctgctggca atagaccgac
     3961 gccggatttg ccataccaat ctgcggcggt ttaggtgctt ctggctgaga aggggttgaa
     4021 caaccagcca ggaccagcaa gcaaggcaga acaaaactga taattttcat t
//
LOCUS       DADMIB010000256         3863 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.263, whole genome shotgun sequence.
ACCESSION   DADMIB010000256 DADMIB010000000
VERSION     DADMIB010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3863
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.263"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            155..2152
                     /locus_tag="JNZ89_004236"
     CDS             155..2152
                     /locus_tag="JNZ89_004236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004119118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HAY8937905.1"
                     /translation="MSENDTIPKKSTSQINKAVFFTSALLIFLLVAFAAVFPDVADKN
                     FKLLQQQIFTNASWFYILAVALILLSVTFLGLSRYGDIKLGPDHAQPDFSYHSWFAML
                     FSAGMGIGLMFFGVAEPVMHYLSPPVGTPETVAAAKEAMRLTFFHWGLHAWAIYAIVA
                     LILAFFSYRHGLPLTLRSALYPIIGDRIYGPVGHAVDIFAVIGTVFGVATSLGYGVLQ
                     VNAGLNHLFGVPINETVQVILIVVITGLATISVVSGLDKGIRILSELNLGLALLLLAL
                     VLCLGPTVLLLKSFVENTGGYLSELVSKTFNLYAYEPKSSNWLGGWTLLYWGWWLSWS
                     PFVGMFIARVSRGRTIREFVTGVLFVPAGFTLMWMTVFGNSAIYLIMNQGATDLANTV
                     QQDVALALFNFLEHFPFSSVLSFIAMAMVIVFFVTSADSGAMVVDTLASGGVANTPVW
                     QRIFWASLMGIVAIALLLAGGLSALQTVTIASALPFSVILLISIYGLLKALRRDLTKR
                     ESLSMATIAPTAARNPIPWQRRLRNIAYLPKRSLVKRFMDDVIQPAMTLVQEELNKQG
                     TISHISDAVDDRIRLEVDLGNELNFIYEVRLRGYISPTFALAAMDNDEQQTEQHRYYR
                     AEVYLKEGGQNYDVMGWNQEQLINDILDQYEKHLHFLHLVR"
     gene            2215..3492
                     /locus_tag="JNZ89_004237"
     CDS             2215..3492
                     /locus_tag="JNZ89_004237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001505014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 domain-containing protein"
                     /protein_id="HAY8937906.1"
                     /translation="MISRWKWMLKQTIKKLWFRATLFAIVAIITALLSILFKSMIPES
                     VSVKVGAEAVDNILNILASSMLAVTTFSLSIMVTAYGSATTNVTPRATRLVVEDVTTQ
                     NVLATFIGSFLFSLVGIIALNMGAYGERGRVILFIVTLVVIALILITLLRWIQHLTSL
                     GRVGETTAQVEQAAIETFIARARNPCLGGYPWLENNEQPKGTVAVYPKKIGYVEYIDM
                     VKLSKLLTNDPRHVYLVAQPGSFIHPSMPVLYLSQGQESSINTDLLETIIVSDARSFA
                     QDPRFCLSVMAEIACRALSPAVNDPGTAIDVIGRGVRILSTYAQNKSDEIEVKYPSVH
                     VAPLQNNDLLEDFFSPVARDGASMREIQIRVLKGLSMLSKGWPEIFAEAAHTLAFETL
                     EHATRADHIDSDRYLIKSTYYNLFSGEYSNKKT"
     gene            complement(3772..>3863)
                     /locus_tag="JNZ89_004238"
     CDS             complement(3772..>3863)
                     /locus_tag="JNZ89_004238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HAY8937907.1"
                     /translation="YIECDYNRWRRHSWCGGLSPEQFENKNLA"
BASE COUNT          942 a          886 c          964 g         1071 t
ORIGIN      
        1 aaaaaagaac aaatggtagt gtccgctatt gccagtacac ctcaacattc caccatgcat
       61 tacgattaac gccgcatagc cagttgaact ttgctacttt gtgagaggta gtaccttcta
      121 tccagtgcga atttaattaa tggaataaat gattatgagt gaaaatgata caatcccaaa
      181 gaagtctaca agtcagatta acaaagcggt attctttaca tctgctttgc taattttcct
      241 tcttgtcgcc tttgccgccg tattcccgga tgtcgccgac aaaaatttta aactacttca
      301 gcaacaaatc ttcacgaatg ccagctggtt ctacatcctt gctgtggccc tgattttact
      361 gagtgtcacg ttccttggac tctcacgcta cggtgatatc aagctgggcc cggaccatgc
      421 gcagcctgat ttcagctacc actcctggtt tgcgatgctt ttttcggcag ggatggggat
      481 cggcctgatg ttctttggcg ttgccgaacc tgtaatgcat tatctttcgc cacccgttgg
      541 cactccagaa accgttgcgg cagctaagga agcaatgcgt ctgacctttt tccactgggg
      601 actgcacgca tgggcaattt atgccattgt ggcgctgatt ctggcgttct tcagttaccg
      661 tcacggtctg cctttaactc tgcgctccgc actctatccc attattggcg atcgcatata
      721 cggacctgta ggacatgcgg ttgatatttt cgctgttata ggcacggtct ttggcgttgc
      781 gacatcactg ggttacggtg ttttgcaggt gaatgccggt ttgaaccatc ttttcggggt
      841 gcccatcaat gaaacggtgc aggtaattct gatcgtggtc atcacggggt tagcgacgat
      901 ttcagtggtg tccggtctgg ataagggaat acgtatcctg tctgaactca atctgggtct
      961 ggctttgttg ctcctggcgc tggtcctgtg tctgggacca accgtgcttc tgctgaagtc
     1021 atttgtggaa aatacgggcg gttatctttc ggaactggtg agtaaaacgt tcaaccttta
     1081 cgcgtatgag cccaagtcga gcaactggct ggggggctgg acattactgt actggggatg
     1141 gtggctttca tggtcgccgt ttgtggggat gttcatcgca cgggtctccc gcgggcgaac
     1201 cattcgcgag tttgtcaccg gcgtgctgtt tgttcccgcg ggttttacgc taatgtggat
     1261 gacggtgttt ggtaacagcg cgatctatct cattatgaac cagggggcca cagacctcgc
     1321 caatactgtt cagcaggatg tggcgctggc cctgtttaat ttcctggagc atttcccgtt
     1381 ctcttctgtg ctgtcattca ttgcaatggc gatggtcatc gtcttctttg taacgtctgc
     1441 tgattcgggg gcaatggttg tggatactct ggcatcaggt ggagtggcaa acacacccgt
     1501 ctggcagcga atattctggg cctcgctcat gggcattgtt gcaattgcgc ttctccttgc
     1561 cggagggcta agtgcgctgc aaacggtgac aatagcgagt gcattgccct tctcagtgat
     1621 cttactaata tctatatacg gacttttaaa agctttgcgc cgggatttga ccaagcgtga
     1681 aagcctgagc atggcgacaa ttgctcctac ggctgcacgt aacccaattc cttggcagag
     1741 aaggttacgc aatatcgcgt atctgccgaa gcgatctctt gtgaaacgtt ttatggacga
     1801 cgttatccag cctgccatga cgctggttca ggaggaactg aacaagcagg ggacgataag
     1861 ccacattagt gatgcagtcg acgatcgtat tcgtcttgaa gtcgatttgg gcaacgagct
     1921 gaattttata tatgaagtga ggcttcgcgg gtatatctca ccgaccttcg cgctcgccgc
     1981 aatggataat gatgagcagc agactgaaca acatcgatat tatcgcgctg aggtttatct
     2041 caaagaaggc ggtcaaaatt atgatgtgat gggctggaac caggaacagc tgattaatga
     2101 catactggac cagtacgaaa aacacctgca cttcctgcac ctggttcgtt aatagcaaca
     2161 tgccgtcctg ggggcggcaa ttattatccc ggccgcaata tgagggaatg cagaatgatt
     2221 tcacgctgga aatggatgct gaagcagaca attaaaaaac tatggttcag ggcaacgtta
     2281 ttcgcaattg tcgcgataat aacggccctt ttatcaattc tttttaaatc aatgatacct
     2341 gagtcggttt ccgtgaaggt tggtgcggaa gcagtcgata acattctgaa catactggca
     2401 tcgagtatgc tggcagtgac cacattttcg ctgagtatca tggtcacagc ctacggttca
     2461 gccactacta atgtgactcc cagagctacg cgtttagttg ttgaagacgt caccacacaa
     2521 aatgtactgg ccaccttcat cggttctttt ctcttcagtc tggtagggat tattgccctc
     2581 aatatgggag cttatggaga aagggggaga gtcattttat tcattgtcac actggttgtc
     2641 attgccttaa tcctcatcac attgcttcgc tggatacagc atttgacctc tctggggagg
     2701 gttggtgaga caacggcaca agtagaacag gcggccatcg aaacatttat tgcgagagca
     2761 agaaatccct gtctcggtgg atatccatgg cttgagaaca atgaacagcc gaaaggaacg
     2821 gttgcagttt atccgaagaa gattggctat gttgaatata ttgatatggt gaaacttagc
     2881 aagctgctga ccaatgatcc ccgtcatgta tacctcgtgg cgcagccagg cagtttcata
     2941 catccgtcca tgccagtttt gtacctgagt cagggccagg agtcgtcaat caacaccgat
     3001 ttacttgaga cgattattgt ctcggatgca cgttcatttg ctcaggatcc tcgattttgt
     3061 cttagcgtca tggccgaaat agcctgccgg gccctttccc ctgcagtgaa cgatcctgga
     3121 accgccattg atgtcattgg cagaggtgtt cgtatacttt ccacttacgc gcagaataaa
     3181 tctgatgaaa tagaagtgaa atatccttca gtacatgttg caccacttca gaataacgat
     3241 ctactggaag actttttctc acctgtcgcg cgcgatggtg ccagtatgag ggagattcag
     3301 ataagagtcc ttaaaggact gtcgatgctg agtaaaggtt ggcctgagat atttgctgaa
     3361 gccgcacata ccctggcatt tgaaacatta gagcatgcaa ctcgtgctga ccatatagat
     3421 tctgatagat atctaataaa atcaacttat tataatttat ttagtggcga atattctaat
     3481 aaaaaaacat agctgcagag caagcaattc ggttgttggc aagtcaaggg caaagcattc
     3541 gcgtgagaat gggcgtatgc tttgtgccaa aagcaaacgt tgctaattct gcactgttca
     3601 gcgatggcgc agtagagaca ggcactgcca ctgtccagtc ggcaaaagcg aacactttgc
     3661 cactgcgggg ataaactgat tgaagctctc gcgcaaaatc acttattctt ttgcgttaat
     3721 aaaatgtagg agatgggtca ttgatcctac ccacgtaata tggacacagg cctaagcgag
     3781 gttcttgttt tcaaattgtt ccggactgag gccgccacac caactgtgcc gccgccaccg
     3841 attgtaatca cattcgatat aat
//
LOCUS       DADMIB010000257         3851 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.264, whole genome shotgun sequence.
ACCESSION   DADMIB010000257 DADMIB010000000
VERSION     DADMIB010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3851
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.264"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..439
                     /locus_tag="JNZ89_004239"
     CDS             <1..439
                     /locus_tag="JNZ89_004239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY8937908.1"
                     /translation="FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR
                     ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIA
                     EGVESEDVARELIKLGCVQAQGYLYQKPMPFSAWDKSGKLVKE"
     gene            447..1775
                     /locus_tag="JNZ89_004240"
     CDS             447..1775
                     /locus_tag="JNZ89_004240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY8937909.1"
                     /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID
                     TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD
                     ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE
                     RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF
                     AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG
                     GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGSYLCLFDVDKFKNI
                     NDTFGHLLGDEVLMKVVKILKSQIPVDKGKIYRFGGDEFAVIYTGGTLEELLSILKEI
                     VHFQVGSINLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ"
     gene            complement(1822..3147)
                     /gene="rimO"
                     /locus_tag="JNZ89_004241"
     CDS             complement(1822..3147)
                     /gene="rimO"
                     /locus_tag="JNZ89_004241"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HAY8937910.1"
                     /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD
                     ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
                     PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
                     SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS
                     MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
                     RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
                     KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE
                     EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV"
     gene            3360..3743
                     /gene="bssR"
                     /locus_tag="JNZ89_004242"
     CDS             3360..3743
                     /gene="bssR"
                     /locus_tag="JNZ89_004242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssR"
                     /protein_id="HAY8937911.1"
                     /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD
                     NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD
                     KLENCLMSLTLSIQSLQKHAMLEKA"
BASE COUNT         1006 a          857 c          951 g         1037 t
ORIGIN      
        1 ttttaccacc atcatgaaag aaaatggcct gaaggcgaac agcctctgtg ttgagatcac
       61 tgaaaccgtg atcgagcgaa ttaatgaaca tttttatctc aatattgaac aactgcgtaa
      121 acaaggggta cggatatcga ttgatgactt tggcaccggt ttgtcaaacc tgaaacgttt
      181 ttatgaaatt aatccagaca gcataaaggt ggactcgcaa tttaccggcg atattttcgg
      241 tactgcggga aaaattgtgc gcattatttt cgatctggca cgctataacc ggatcccggt
      301 gattgcggaa ggcgtagaga gcgaagacgt tgcacgcgaa ttaattaaat taggatgtgt
      361 tcaggctcag gggtatctgt accagaaacc tatgccattc tccgcctggg ataaaagtgg
      421 aaaattagta aaagagtagt ttacgtatgt ccagaatcaa taagttcgta cttacagtca
      481 gtctgctgat ttttatcatg atttcagcag ttgcctgcgg gatctacact caaatggtaa
      541 aggaacgggt gtatagcctg aaacagtccg ttattgatac tgcttttgcg gtggcaaata
      601 ttgctgaata tcggcgtagc gtggcaattg atcttatcaa cacgctaaat cccacggagg
      661 aacagctgtt ggttggtttg cgcacagctt acgccgactc ggtttccccc tcttatttgt
      721 acgatgtcgg tccttatctg atttccagtg acgaatgtat tcaggtaaag gagttcgaga
      781 aaaattattg tgcagatatt atgcaggttg tgaagtatcg acatgtcaaa aatacagggt
      841 ttatctcttt tgacggtaaa accttcgtct attacctcta tccggtaact cacaatcgta
      901 gtctgatatt tttgcttggt ctggagcgtt tttctttact gtcaaaatcg ctggcgatgg
      961 acagcgagaa cctgatgttc tctctattta agaacggtaa accggtgacc ggtgatgaat
     1021 ataatgctaa aaacgccatc ttcaccgttt cggaagcgat ggagcacttc gcctatttgc
     1081 cgaccggatt gtacgtattt gcgtataaaa aagatgttta tttgcgggtc tgtacattga
     1141 ttattttctt tgccgcattg gtggctgtga tatcgggtgc cagttgcctc tatctggtac
     1201 gcagagtgat taatcgtggt attgtggaga aagaagccat cattaataac cattttgaac
     1261 gcgtactgga tggcgggctt ttcttttcgg ctgccgatgt caaaaaactc tacagtatgt
     1321 ataactcggc gttcctggac gacctgacca aagcaatggg cagaaaatcc tttgacgaag
     1381 atttaaaagc gctgccggaa aaaggcagtt atttgtgcct gtttgacgtc gataaattca
     1441 aaaacattaa cgacaccttc ggtcatttgc tgggcgatga agtgttgatg aaagtggtga
     1501 aaatccttaa atcacagatc ccggtagata aaggtaaaat ctaccgcttc ggcggtgacg
     1561 aatttgcggt gatttatacg ggtggaacgc tggaagagtt gctatcgatt ctaaaagaaa
     1621 tcgttcattt ccaggtggga agcattaatt taagtaccag tatcggtgta gcgcattcaa
     1681 atgaatgtac caccgtcgaa cgcttgaaaa tgctggcgga tgagcggctg tataagagta
     1741 agaaaaacgg cagggctcag attagctggc agtaatcatt attcgcaggc cggacaaatg
     1801 attttgcccg gcctgaatta attaaacccg gctaccccac aaatcgtact catcggcgtg
     1861 ctcgactttc acacgcagga tatcacccgg cttaacgttg gtttcaccat tgagataaac
     1921 cgcgccgtcg atttccggtg catctgccat gctgcgacca atcgcgcctt cttcgtccac
     1981 ttcgtcgata atcaccagaa tttcacggcc cactttctct tgcaggcgct cggcggaaat
     2041 ctgctgctgc agctgcatga aacggttcca gcgttcttct ttaacttctt ccggaacctg
     2101 gtcaggcagg gcattggcgt ctgcaccttc aaccgggctg tatttaaagc agccaacgcg
     2161 atccagacgc gcttctttca ggaagtcgag tagcatctgg aaatcttctt ctgtctcgcc
     2221 agggaagccg acaataaagg ttgagcgtag ggtcagttcc gggcagattt cgcgccactg
     2281 tttgatgcgc gccagttggc gatctacaga acccggacgc ttcatcagtt tgagaatgcg
     2341 cgggctggcg tgctgcaacg gaatgtccag atacggcagg attttgcctt ctgccatcag
     2401 tgggatgacg tcgtccacat gcggataagg gtaaacgtag tgcagacgtg tccagatccc
     2461 cagtttcgat aactgttcgc acaggctgac catgctggtt tttaccggct cgccgttgtg
     2521 gaagccagta cgatgtttaa catcaacgcc ataggcggaa gtatcctgcg agatcaccag
     2581 aatctcttta acgcccgcat ctaccagacg tttcgcttca cttaacactt cgccaatcgg
     2641 acggctcacc aggtcgccgc gcatagacgg aataatgcag aaggtgcagc ggtgattaca
     2701 gccttccgaa attttcagat aggcataatg acgcggcgtc agtttcacac cttgttctgg
     2761 caccaggctc aggaatgggt tgtgtttcgg ttttggcacg tagtgatgaa cgtgctccag
     2821 aacctgctca tagctatgag gcccggtgat ttccagcact ttcgggtgga cttcgcggat
     2881 ctgatcttct tttgccccca gacaaccggt cacaattacc ttgccgtttt cattcaacgc
     2941 ttcaccaatg gcttccagtg attcttgtac cgcgctgtca ataaagccgc aggtgttgac
     3001 gatcaccatg tccgcatcgt catagctcgg taccacgtca taaccttcag tgcggagttc
     3061 ggtgagaata cgctctgaat cgacaaggtt tttcggacag ccaagggaaa caaagccgat
     3121 tttcggctgg ggagttactt tgctcatagc ttaaaaaata ttcagttaca ggaaaggtca
     3181 gggcagggat tctacagagt tctggataaa atttgtatcg caatctcatt cgctggcgga
     3241 ggcgaaggaa atgtaaattt tgttaattcg gcgtgaagaa ttgatcctgg acagcatttt
     3301 gctcaaaaaa tagccatact atttaattgc aacaaggctg gaaagaggag gatcgaagta
     3361 tgttcgttga cagacagcga atcgatctgc tgaaccggtt gatcgacgca cgcgttgacc
     3421 tcgctgcata cgtgcaactg aggaaggcaa aaggatacat gtccgtcagc gaaagcaatc
     3481 atctacgaga taactttttt aaactgaatc gcgaactgca cgataaatcg ctgcggttga
     3541 atcttcatct ggatcaggaa gagtggagtg ctcttcatca tgctgaagaa gcattagcga
     3601 cagccgcagt atgtttgatg agtgggcacc atgattgccc gactgttatt accgtcaacg
     3661 ccgataagct tgaaaattgt ctgatgagct taacgctgag tatccagagc ctgcagaagc
     3721 acgccatgct tgagaaggcc tgaaaactaa gggggagaaa gcgtctcccc cttcatgttt
     3781 aagtttttgt aaaaatgaat ttgttatctc ctccactgac tacgctttaa gccagagtca
     3841 atccggaggc g
//
LOCUS       DADMIB010000258         3818 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.265, whole genome shotgun sequence.
ACCESSION   DADMIB010000258 DADMIB010000000
VERSION     DADMIB010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3818
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.265"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            17..253
                     /locus_tag="JNZ89_004243"
     CDS             17..253
                     /locus_tag="JNZ89_004243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004982904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C TorY domain protein"
                     /protein_id="HAY8937912.1"
                     /translation="MNPGTDLTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLALA
                     TLSEEGIKALTLNGEWQAGEFSASNMVNRNTGCW"
     gene            193..1575
                     /locus_tag="JNZ89_004244"
                     /pseudo
     CDS             193..1575
                     /locus_tag="JNZ89_004244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707760.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            complement(1740..2711)
                     /gene="cmoB"
                     /locus_tag="JNZ89_004245"
     CDS             complement(1740..2711)
                     /gene="cmoB"
                     /locus_tag="JNZ89_004245"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HAY8937913.1"
                     /translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN
                     AVEFLPEIKPYRLDLLHSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNID
                     TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ
                     FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
                     EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRVVDVC
                     VTTTEEQRRTEWMVTESLSDFLDPHDPSKTVEGYPAPKRAVLIARKP"
     gene            complement(2708..3451)
                     /gene="cmoA"
                     /locus_tag="JNZ89_004246"
     CDS             complement(2708..3451)
                     /gene="cmoA"
                     /locus_tag="JNZ89_004246"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HAY8937914.1"
                     /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
                     MISMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI
                     DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL
                     VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
                     HKAGFEHSELWFQCFNFGSLVALKAEDAA"
     gene            complement(3492..>3818)
                     /locus_tag="JNZ89_004247"
     CDS             complement(3492..>3818)
                     /locus_tag="JNZ89_004247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310606.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937915.1"
                     /translation="LRLQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMN
                     GAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWE
                     LVFSLR"
BASE COUNT         1010 a          952 c         1009 g          847 t
ORIGIN      
        1 aggcgagctg gctaccgtga atcctggtac cgatctcacc gtcgttgatg ccagtggcaa
       61 acagccgatc gttctgttgc agggttatca aatgcagggc agtgaaaaca cgctctacct
      121 ggcggcaggt caacggctgg cgctagccac attaagtgaa gaaggtatca aggcgctcac
      181 gctaaacggg gaatggcagg ctggggaatt cagcgccagc aatatggtga acagaaacac
      241 tggatgctgg tgacgctggc ggcggtgtta gggcagattg gtacaccggg cggcggtttt
      301 ggtttctctt atcattactc caatggtggc aacccgacac gtgttggcgg cgtgctgccg
      361 gaaatgtctg cggcgattgc cggacaggcc agcgaggccg ctgatgatgg cggaatgagg
      421 gcgattcctg ttgcccgtat cgtcgatgcg ctggaaaatc ctggcggcaa atatcagcat
      481 aacggtaaag agcaaacgta tccgaatatc aaaatgatct ggtgggcggg tggcggtaac
      541 tttacccatc accaggatac taatcgtctg attaaagcat ggcagaaacc ggagatgatc
      601 gtcgtttctg aatgctactg gaccgcagct gctaaacatg cagatatcgt attaccgatc
      661 accacatcgt ttgagcgcaa tgacttgacg atgaccggtg attacagcaa ccagcatatt
      721 gtgccgatga agcaggctgt cgctccgcaa tttgaagcgc gaaacgattt tgatgtgttt
      781 gccgatcttg cggaattact gaaacctggc ggaaaagaga tctataccga aggtaaagat
      841 gaaatggcgt ggctgaaatt tttctatgat gccgctcaga aaggtgcccg tgcgcaacgc
      901 gtgactatgc cgatgtttaa tgccttctgg cagcaaaata aactgatcga aatgcgccgc
      961 agcgagaaga acgaacagta cgttcgttat gctgatttcc gcgccgatcc ggtgaaaaat
     1021 gcgctgggta cgccaagcgg caaaattgag atttactcca aaacgctgga aaaatttggc
     1081 tataaggatt gcccggcaca tccaacctgg cttgcgcctg atgagtggaa gggtaccgcc
     1141 gacgagaagc agttgcagct tctgaccgca catccggcac accgtttaca tagtcagctt
     1201 aactatgcgg aactgcgtaa aaaatatgcg gttgcagatc gtgaaccaat cactattcat
     1261 accgaagatg ctgctcgctt tggtattgcg aatggtgatc tggtgcgtgt gtggaacaaa
     1321 cgtggtcaga ttctgacagg cgcggtggtg actgacggga tcaaaaaagg cgtggtatgc
     1381 gtgcatgaag gtgcatggcc agatctggaa aatggcttgt gtaaaaacgg cagtgcgaac
     1441 gtgttaacgg cggatatccc cagctcgcag ctggcaaatg cctgtgccgg taactctgcg
     1501 ctggtgtata tcgaaaaata tacgggtaac gcaccgaagt taacggcatt tgataagcct
     1561 gctgttcagg cgtaagaagt gaatagcgcc cggaaacggg cgctgaggtt atgcaaacgt
     1621 aaaactgcct gatgcgctat gcttatcagg cctacatagt ccctgcaata gattgaatta
     1681 gcaagggttt gtaggccgga taaggcattc acgctgcatc cggcagtaat accagacctt
     1741 tacggcttgc gcgcaatcag caccgcgcgt ttaggcgcag gataaccttc aactgtctta
     1801 ctcggatcat gtgggtcgag gaaatcggac agagattcgg taaccatcca ttcagtgcgt
     1861 cgctgctctt cagtagtggt aacgcacaca tccacaacgc ggatatctac aaaaccacac
     1921 ttcttcagcc agtttttcag cgccagcgcg gaagggatga aatagacatt acgcatttgc
     1981 gcgtaacgat cgcctggtac cagcaccgtg ttctcatcgc catcaataac cagcgtttcc
     2041 agcaccagtt caccctcatt caccagttga tctttcaact gccagagatg ctccagcggc
     2101 gaacggcgat ggtaaagcac gcccatcgaa aagacggtat caaaggcttt cagtgccgga
     2161 agctgttcaa tacctaacgg taacaaatgt gcgcgctgat cgttacccag tagtttacgc
     2221 accgcttcaa actggcacag aaacagttgc gtagggtcga tccccaccgc gaggtgcgcg
     2281 cctgcgccaa tcatgcgcca catgtgataa ccgctgccgc agccgacatc cagaatggtg
     2341 cgtccggtta aatcagaaag atggggcaga acacgatccc atttccagtc ggaacgccat
     2401 tcggtatcga tgttgacgcc atacagtgag aacggccctt tgcgccatgg catcaggttc
     2461 cgcataagcg tttcaatgcg tttaatttgc ccggtgctca gtggctcttc gctttcggcg
     2521 gttacgctat gcaataaatc cagacgatac ggtttaattt caggcagaaa ttccaccgcg
     2581 ttggaccact gcttaaacag cccgtgctgc tgctcgcgct gccagttagc aatctgcgcg
     2641 ggcagcgttt cgagccagtg tgaaagatga tttttggcaa tcagagaata aaagttacca
     2701 aagtcgatca tgcagcgtcc tctgctttta atgccaccag tgaaccaaag ttaaagcact
     2761 ggaaccacag ctcgctatgc tcaaaaccgg ctttatgcag gcgtgcttta tgggtttcca
     2821 cggaatcggt cagcatcacg ttttccagca tgctgcgctt ctggctgatc tccagttcgc
     2881 tgtaaccgtt ggcacgttta aagtcgtggt gcatgttgaa caacagttca ccaactttgg
     2941 catcttcgaa actgaatttt tccgaaagca ccagcgcgcc gcccgggttc agtccttgat
     3001 aaattttatc cagtaatgcc tggcgctcgg aaggttccag gaattgcagg gtaaaattca
     3061 gcaccaccat cgatgcgttt tcaatggcga tatcgcgaat atcaccttca atgacgtcta
     3121 ctggcgtagg ggctttatag gcgtcaatat gacgacggca gcgttcaatc atcgccgggg
     3181 agttgtcgat ggcaataatt ttgcaattat catgatgaat gttgcgacgc accgagagcg
     3241 tcgccgcgcc cagagaacaa cccagatcgt aaacctgcgt accaggttga acgaagcgct
     3301 cggctaacat actaatcatg gaaataatat tggaatagcc gggaacggaa cgctggatca
     3361 tatccgggaa gacttcagct acccgttcat caaaggtcca gtcgcccagt ctggcgatag
     3421 gggcagaaaa tagcgtgtcg cggtgagaca taacgtaaaa atccgggaaa aagaaagtgg
     3481 cgtattgtgc gctaacgcag ggagaaaacc aactcccagg gcatatacca aagattcgcc
     3541 agcaccatca gcaacagcgc acaccaggtg gcgctcatgc cggaacgtcg ccagcgaaac
     3601 agacggtgat gaaaaccgta ataatgcatc agacgaccag caagcaaaac gatgccgcaa
     3661 atatgcacca tccaggtttc tgcgccattc atttccataa acagcatcag cacaatcgcg
     3721 atgggaatat attccaccgc gttaccatga atgcgaatag cgctttgcag ttcgctaaaa
     3781 ccaccgtcac cataggcaac gcggtactgc aaacgcaa
//
LOCUS       DADMIB010000259         3781 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.266, whole genome shotgun sequence.
ACCESSION   DADMIB010000259 DADMIB010000000
VERSION     DADMIB010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3781
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.266"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..209)
                     /locus_tag="JNZ89_004248"
     CDS             complement(<1..209)
                     /locus_tag="JNZ89_004248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000680163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WGR domain-containing protein"
                     /protein_id="HAY8937916.1"
                     /translation="MRHFIYQDEKSHKFWAVEQQGNELHISWGKVGTKGQSQIKSFSD
                     AAAAAKAELKLIAEKVKKGYVEQAK"
     gene            complement(350..2383)
                     /gene="metG"
                     /locus_tag="JNZ89_004249"
     CDS             complement(350..2383)
                     /gene="metG"
                     /locus_tag="JNZ89_004249"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HAY8937917.1"
                     /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
                     EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE
                     NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE
                     VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
                     MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV
                     SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPTNLFVHGYVTVNGAKM
                     SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
                     LASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALAD
                     LANRYVDEQAPWVVAKQESRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN
                     TELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAPVTGPLADDP
                     IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
                     ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK"
     gene            2515..3624
                     /gene="apbC"
                     /locus_tag="JNZ89_004250"
     CDS             2515..3624
                     /gene="apbC"
                     /locus_tag="JNZ89_004250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HAY8937918.1"
                     /translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
                     MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG
                     INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ
                     RPTSPDGTHMAPIMSHCLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
                     LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
                     NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP
                     ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV"
BASE COUNT          905 a          970 c          970 g          936 t
ORIGIN      
        1 tccttcgctt gctccacata ccccttcttc accttctccg caatcagctt aagctccgct
       61 tttgccgctg ccgcagcatc tgaaaaactt tttatctggc tttgcccttt ggtgccaact
      121 tttccccaac tgatatgcaa ctcgtttccc tgttgctcaa ctgcccagaa tttatgtgat
      181 ttttcgtcct gatagataaa gtgtctcatt ctgcatccct gtaattttat ccagttgaat
      241 gcagatgcta ccagtattta tgcgggttag agagagacaa aatcgcaaga aaacaacttt
      301 aggaatttat aaagaaaagg cgctgtcgat gcagcgcctt gaagggggat tatttcacct
      361 gatgacccgg tttagcaccg gcatccgggc ttagcaggaa aatatctttc ccgccaggac
      421 cggcagccat caccatgcct tcagagatac cgaagcgcat tttacgtggt gctaggttag
      481 ccaccataat ggtgtgacga ccaatcagtg cctgcggatc cgggtaagca gaacgaatac
      541 cggagaagac attgcgtttt tcaccgccga gatccagcgt caggcgcagc agtttgtcag
      601 aaccttcaac aaactctgcg ttttcaatca gcgccacgcg caggtcaact ttagcgaagt
      661 cgtcaaaggt gatggtttcc tgaatcggat catctgccag cgggccagtt accggcgcgg
      721 cagcggcttt tacttcttct ttagaggctt ccaccagtgc ttcaacctgc ctcatatcga
      781 tgcggttata cagcgccttg aacggattca ctttgtggcc cagcagcggt tgctggatac
      841 catcccaggt cagttccgta ttgaggaatg cttctgcacg ctcggtcagt ttcggcagta
      901 ccggcttcag gtaagtcatc agcacgcgga acaggttgat gcccattgag caaattgcct
      961 gcaggtcggc atcgcggctt tcctgtttcg ccaccaccca cggagcctgt tcatcgacat
     1021 agcggttagc cagatcagcc agcgccatga tttcgcgcac ggctttacca aattcacggc
     1081 tttcccacgc ttcaccaatc acttcagcgg catcagtgaa ggttttgtac aactgcgggt
     1141 cagccagttc gcttgccagc acgccgtcaa aacgcttgtt gataaagccc gcattacggg
     1201 aggccaggtt aaccactttg ttaacgatat cggcattcac acgctgaacg aaatcttcca
     1261 ggttgagatc gatatcatcg atgcgcgaag agagtttcgc agtgtagtag taacgcaggc
     1321 tgtctgcgtc aaaatgattc agccaggtgc tggctttaat aaaggtgccg cgagacttgg
     1381 acatcttcgc gccgttcacc gtcacatagc catgaacaaa caggttggtc ggcttgcgga
     1441 agttgctgcc ttccagcatg gcaggccaga acaggctgtg gaagtaaacg atatctttac
     1501 cgatgaagtg gtacagctcg gcggtggagt ctttcttcca gtattcatcg aagcttacgc
     1561 tgtcgccgcg cttgtcgcac agattcttga aagaacccat gtagccaatc ggtgcgtcca
     1621 gccagacgta gaaatatttg cccggcgcgt tcggaatttc aaaaccgaag taaggtgcgt
     1681 cgcgggagat atcccactgt tgcaggccag attcaaacca ctcctgcatt ttgtttgcca
     1741 cctgctcctg caacgcaccg ctgcgggtcc atgcctgcaa catttcgctg aaagagggca
     1801 gatcaaagaa gaagtgttca gaatcacgca ttaccggggt agcgccagaa accaccgatt
     1861 tcggctcgat cagttcagtc gggctgtagg tcgcgccgca gacttcgcag ttatcgccgt
     1921 attgatccgg ggatttacat ttcgggcagg tgcctttcac aaaacggtcc ggcaggaaca
     1981 tgcctttttc cggatcgtac agctgagaga tggtgcggtt tttaataaaa ccgttttctt
     2041 tcaggcgaga gtagataagt tctgacaact ggcggttctc ttcgctgtgt gtcgagtgat
     2101 agttgtcata gctgatgtta aagcctgcga aatcagtctg atgctcctga ctcatttcgc
     2161 caatcatctg ctccggggtg ataccaagct gctgagcttt cagcatgatc ggtgtaccgt
     2221 gggcatcgtc ggcgcagatg aagttgacct cgtggccgcg cattcgctgg taacggaccc
     2281 agacatcagc ctggatgtgc tccagcatat ggccgaggtg gattgagccg ttagcgtacg
     2341 gcagtgcgca cgtcaccaga attttcttcg cgacttgagt catagtaggc attacttctt
     2401 aatagtgaaa aggggttaga tagtaccaaa tgggaaaatg ttaagtaagt acttctctat
     2461 attcttcagg taaactatca gctgatggtt tatctataca aaaaaggagt cgggatgaac
     2521 gaacaatccc aggccaaatc accagaagcc ttgcgcgcaa tggtcgccgg gacactggcc
     2581 aattttcagc acccaaccct gaagcataac ctcaccacgc tgaaagcgtt gcaccatgtc
     2641 gcctggatgg acgacacgtt gcatgtggaa ctggttatgc cattcgtctg gcatagcgcg
     2701 tttgaagagt taaaagagca atgtagcgcc gaactgctgc gtatcaccgg ggcgaaagct
     2761 atcgactgga aactgtcgca caatatcgcc accttaaaac gcgtgaagaa tcagccgggt
     2821 attaatggtg tgaagaacat cattgcggtc agttccggta aaggcggcgt gggtaaatcc
     2881 tccacggcgg taaacctggc gctggcactg gcggcggaag gggcgaaagt cggcattctg
     2941 gacgccgata tctacggccc atcaattccc accatgctgg gcgcagaaaa tcagcgtcca
     3001 acttcgccgg acggtaccca tatggcaccg attatgtctc attgcctggc aaccaattca
     3061 attggttatc tggtcactga cgacaatgcg atggtgtggc gtggaccgat ggcgagcaag
     3121 gcgttaatgc agatgttgca ggaaaccttg tggccggatc tcgactatct ggtgcttgat
     3181 atgccgccag gcaccggtga cattcaattg acgctggcgc aaaacattcc agtaactggt
     3241 gcagtcgtgg tcaccacccc gcaggacatc gcgttgatcg atgcgaaaaa aggcattgtg
     3301 atgttcgaga aagtcgaggt tccggtgctt ggtattgtcg agaacatgag tgtgcatatt
     3361 tgcagtaact gtggtcacca tgaaccgatt ttcggtaccg gtggtgcaga gaaactggct
     3421 gaaaaatacc acacacagct gctggggcag atgccgttac acatctcctt acgtgaggat
     3481 ctcgataaag gcacgccaac ggttatcagc cgtccggaga gcgaatttac cgctatctac
     3541 cgccagctgg ctgaccgcgt tgcagctcag ctctactggc agggtgaagt cattccaggc
     3601 gagatttcct tccgcgcggt ctaacgccta ttaaccattc tggttattct tcatacaccg
     3661 cagagatgtt acattgatgc ggtgtattag tttttgccgc attaatgaac acttatttaa
     3721 tactgcgaat attctgcgga ccttcgtccg aaactctaca aagtcgattg atcatacagg
     3781 c
//
LOCUS       DADMIB010000260         3760 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.267, whole genome shotgun sequence.
ACCESSION   DADMIB010000260 DADMIB010000000
VERSION     DADMIB010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3760
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.267"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(162..581)
                     /locus_tag="JNZ89_004251"
     CDS             complement(162..581)
                     /locus_tag="JNZ89_004251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309968.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8937919.1"
                     /translation="MVHEDKARKEFASRLALACENAGYEQHGRQAEIARRMKLTPKAV
                     SKWFNGETIPRREKLRELATLIGTTPTYLLGEDTEESGQVRFYQELNPRQKIIIDLLD
                     ELPDSETDELLKTLEEKKQKYNAIYEELARKKKQKAS"
     gene            661..915
                     /locus_tag="JNZ89_004252"
     CDS             661..915
                     /locus_tag="JNZ89_004252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8937920.1"
                     /translation="MNQKTLEDVIKTVRVAVVADVCGVSQRAIYKWMDNGKLPRTEYT
                     GETNYAEKIALASNGLFSADAILTIGRNKTTTKKLMGVDS"
     gene            912..1337
                     /locus_tag="JNZ89_004253"
     CDS             912..1337
                     /locus_tag="JNZ89_004253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HAY8937921.1"
                     /translation="MKIKHEHIRMAMNAWAHPDGEKVPAAKITKAYFELGMTFPELYD
                     DSHPEALARNTQKIFRWVEKDTPDALKKIQALLPAIEKAMPPLLVARMRSHSSAYFRE
                     LVETRERLVRDADDFVAVAIAGFNQMNRGGPAGNIVAVH"
     gene            1409..2479
                     /locus_tag="JNZ89_004254"
     CDS             1409..2479
                     /locus_tag="JNZ89_004254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001736248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replisome organizer"
                     /protein_id="HAY8937922.1"
                     /translation="MANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSAS
                     RNVTRGHIDVTTEDLASALDVTEEVIDSILQTMQGRVLDGDLITGWEKRQVLKEDNGN
                     ISQTAKSPAERKRAQRERERKREQNGDCHGASRYVTHMSRRVTTDKDTDKDTDQEDQN
                     TMVHGVKNATNQAGDVQTVNPGQPAGTTPEADSAYALKADSGAVQQAMTASPEQSHQL
                     QQPEADSAIQREADRVVPENTGQSVGRVDYPDVFEQVWREYPLRAGANPKKSAFSAWK
                     ARLREGVPPEAMLDGVRRYARYLAATGKTGTEFVQRATTFFGPDRNFENPWLLPVSGT
                     NNQRCVNHISEPDNEIPPGFRG"
     gene            2520..2942
                     /locus_tag="JNZ89_004255"
     CDS             2520..2942
                     /locus_tag="JNZ89_004255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001151247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HAY8937923.1"
                     /translation="MAKVFTQEEREKIKGQVLELVRQSGRETLRQLEAKTGATRYLMS
                     VLARELVASGDVYNSGYGLFPSEQARKDWQNARKKLSRAKLKKPSAVDPDLIWSLPDG
                     EIRRYDSRLNIICRECRKSEVMQRILSFYQGNFQEVMA"
     gene            2939..3244
                     /locus_tag="JNZ89_004256"
     CDS             2939..3244
                     /locus_tag="JNZ89_004256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001266129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4406 domain-containing protein"
                     /protein_id="HAY8937924.1"
                     /translation="MRVRVYIAGPMTGYKNFNREAFHNAEEELKREGHTVLNPAVLPD
                     GLTQPQYMDICMAMIRCVDAIYMLKGWQRSAGAKAELALAEKLGHAVIFQETASVQD"
     gene            3231..3686
                     /locus_tag="JNZ89_004257"
     CDS             3231..3686
                     /locus_tag="JNZ89_004257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000335116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY8937925.1"
                     /translation="MCKTNYQALRERYSPIQVPECPVCGDEMSIQRIFSRTHIVYACT
                     GEGDDGYFKTGRTFADEHYLKSRVTVVDVSAPDVLALLKELEVKDKRIAELTDALTQM
                     INAHKTTIRFGHERITECGGDCDSPEKMISENPDIRMAEAVLRAGIKTE"
BASE COUNT         1035 a          797 c         1018 g          910 t
ORIGIN      
        1 gtattgccct gcattctgtg gggcggggtg ggtggcaggt atataatgta ctttgcgttc
       61 attgttgtaa agtgcttatg gtacattttg tgtgtaaaaa aatgagatgg gataaagtga
      121 agcacaaacc cggaggaagg cgctaccgga tttatgctgg tttaagaggc tttttgtttt
      181 ttctttcgtg ctaactcttc gtaaattgca ttgtacttct gttttttctc ttcaagagtt
      241 tttaaaagtt catctgtctc actgtcaggg agctcgtcca gaaggtcaat gatgattttt
      301 tgtcttggat ttaactcctg atagaaacgt acctgtccac tttcttctgt atcctctccc
      361 aaaagatagg ttggtgttgt tcctattagt gttgctaatt cccttaattt ctcccggcga
      421 ggaattgttt cgccattaaa ccatttgcta accgcttttg gtgttaattt cattcgacgg
      481 gcaatttctg cctgccttcc atgttgttca taaccagcgt tttcacaggc tagcgcaagc
      541 ctactggcga actctttacg cgctttatct tcatgaacca taagttcaat gatattcgct
      601 cttgaatgta ctgtcagttc tgttatagca tgtactcaaa gttcacattg tgagggtgat
      661 atgaaccaga aaacacttga agatgtaatc aaaactgttc gcgttgctgt tgtggccgac
      721 gtttgtggtg tcagccaaag agcaatctat aaatggatgg ataacggaaa attgcctcgc
      781 acagaatata ccggcgaaac aaattacgct gaaaaaatcg ctcttgcatc aaacggatta
      841 ttttctgccg atgcaatttt aactattggc aggaataaaa ctactacgaa aaagctgatg
      901 ggagttgatt catgaaaatc aagcatgaac acatccgcat ggcgatgaat gcctgggcgc
      961 atccggacgg cgaaaaagta ccggctgcga aaattaccaa agcgtatttc gagctgggaa
     1021 tgacgttccc ggaactgtat gacgacagcc atccggaagc cctggctcgc aatactcaga
     1081 aaattttccg ctgggtggag aaagacaccc ctgatgcgct taaaaaaatt caggcgttgt
     1141 taccagctat cgaaaaagca atgccacctc tgctggtggc ccgaatgcgc agccatagct
     1201 cagcctattt tcgggaacta gtggagacgc gggaacgact ggtgagagac gctgatgatt
     1261 ttgtcgcagt ggcgatcgct ggtttcaacc agatgaatcg tggtggccct gcaggaaata
     1321 ttgtggctgt gcattgactc gcaatattca taccggatca cttccggcaa tttgtgagta
     1381 aaaagattcg gtatcaaaag aggtgagtat ggctaacgcc tggctcagat tatggcatga
     1441 catgccaaat gaccctaagt ggcgaacaat tgccagggtg tcagggcagc caattgcaac
     1501 agtgatggca gtgtatatcc acctcctggt gagcgcgtca cgaaatgtca cgcgaggtca
     1561 cattgatgtc acgacagaag atttggcaag tgcgctcgac gtgacagaag aggtaattga
     1621 ttcaattttg cagacgatgc aggggcgggt acttgatggt gatttaatca ctggatggga
     1681 aaaacgccag gtgctgaaag aggacaacgg caatatttcg caaaccgcaa aatctcctgc
     1741 agagcgcaag agggcgcagc gagagaggga aagaaagcgg gaacaaaatg gcgattgtca
     1801 cggcgcgtca cgatatgtca cgcacatgtc acgacgagtc acgacagata aagatacaga
     1861 taaagataca gatcaagaag atcaaaacac tatggtccat ggcgtaaaaa acgccacgaa
     1921 ccaggcaggg gatgttcaga ccgtcaatcc tggtcagcca gcaggcacga caccggaagc
     1981 cgattcagcg tatgcgctga aagccgattc gggcgctgtg cagcaggcga tgaccgcaag
     2041 tccggagcaa tcacaccaac tgcagcagcc tgaagccgat tccgccattc agcgggaagc
     2101 cgatcgggta gtcccggaaa acaccgggca gtctgtggga cgagtggatt atccggatgt
     2161 gttcgaacag gtctggcggg agtacccgtt gcgtgccggg gcaaacccga agaaatccgc
     2221 tttcagtgcc tggaaggcca gattacgcga gggggtgcca ccagaggcca tgctggatgg
     2281 cgtgaggcgt tacgcaagat acctggcggc taccgggaaa acgggaacgg aatttgttca
     2341 gcgagcgacg acgttttttg gaccggaccg gaattttgag aacccctggt tgctcccggt
     2401 aagcggcacg aacaaccagc gttgtgtgaa tcatatttct gaaccggata acgaaattcc
     2461 gccgggcttc agggggtaag tgttaatttc tggtcatgag gtaattttca ggagggcttg
     2521 tggcaaaagt ttttacacaa gaagagcggg aaaaaattaa agggcaggtt cttgaactcg
     2581 tacgccagag tgggcgcgag acgttacgac aactggaagc taaaactggg gcaacaagat
     2641 atctgatgag cgttctggcc agagagctgg ttgccagtgg cgatgtatac aactctggtt
     2701 acgggttatt cccgtctgaa caggcgcgta aggactggca aaatgcccgt aaaaagctct
     2761 caagggcaaa gctgaagaaa ccatctgcgg ttgatccgga ccttatctgg tcattacctg
     2821 acggagaaat acgtcgctac gacagtcgcc taaacataat ctgtcgcgag tgccggaaga
     2881 gcgaagttat gcagcgcata ttgtcgtttt atcagggtaa ttttcaggag gtgatggcgt
     2941 gagggtgaga gtctatatcg ccggtccaat gaccgggtat aaaaatttca accgtgaggc
     3001 gtttcacaat gcggaagagg aactgaaacg ggaagggcat accgtcttaa acccggcagt
     3061 acttccggac gggctgacac agccgcagta catggatatc tgcatggcga tgattcgttg
     3121 tgtggatgcg atttacatgc tgaaaggctg gcagcggtca gcaggcgcta aggcagaact
     3181 ggcgctggcg gagaaactgg ggcatgcggt gatttttcag gagacagcca gtgtgcaaga
     3241 ctaattacca ggcattacgt gaacgttatt caccaattca ggtgccggaa tgtcctgttt
     3301 gtggcgatga aatgtcgata cagcgcatat tttccagaac gcatattgtg tatgcctgca
     3361 caggtgaggg ggatgatgga tattttaaaa ctggtcgaac ttttgcggat gagcattacc
     3421 tgaaatcgcg cgtaaccgtc gttgatgtta gcgctcctga cgtactggct ttactgaaag
     3481 agctggaagt taaagacaaa cgcattgcag aattgacaga tgcgcttaca caaatgatta
     3541 atgcgcacaa aaccacaatt cgttttggtc atgaacgcat aactgaatgt ggtggtgatt
     3601 gcgactcgcc ggaaaagatg atttcagaaa atccggatat cagaatggca gaggctgttt
     3661 tgagagcagg aataaaaact gaataattaa atttagcaca gcaaataaaa tttaatcctt
     3721 aaccggaggg atttctgcac cctcagaaca tcaggaggcc
//
LOCUS       DADMIB010000261         3757 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.268, whole genome shotgun sequence.
ACCESSION   DADMIB010000261 DADMIB010000000
VERSION     DADMIB010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3757
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.268"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..1410)
                     /gene="maeB"
                     /locus_tag="JNZ89_004258"
     CDS             complement(<1..1410)
                     /gene="maeB"
                     /locus_tag="JNZ89_004258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HAY8937926.1"
                     /translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
                     APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
                     DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV
                     CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK
                     MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
                     GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
                     APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG
                     EEARVLHATQELVTLGLAKP"
     gene            1699..2649
                     /gene="tal"
                     /locus_tag="JNZ89_004259"
     CDS             1699..2649
                     /gene="tal"
                     /locus_tag="JNZ89_004259"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HAY8937927.1"
                     /translation="MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL
                     SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSF
                     DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGISAAEELEKEGINCNLTLLFSF
                     AQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIYDYYKQHHYE
                     TIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMS
                     EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
     gene            2669..>3757
                     /locus_tag="JNZ89_004260"
     CDS             2669..>3757
                     /locus_tag="JNZ89_004260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HAY8937928.1"
                     /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
                     KHNPTDPTGYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
                     GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG
                     ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGH
                     DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL
                     GWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPK
                     DWEKTTQKYINELQANPAKIATRKASQNT"
BASE COUNT          926 a          980 c          971 g          880 t
ORIGIN      
        1 cggtttcgcc agtcccagcg ttaccagttc ctgagtggca tgcagaacgc gcgcctcttc
       61 cccttctggc agaacaacgc gcttcggcgc tttgcgagcc tgggagaaaa tcggcttcat
      121 aaacaggttg gttttgtaaa cgaactcagt cagcttgtcg atgtagacgt cgaaatcagc
      181 aatcggacgc gtcgccacgc ccgactccat cgcggcttta gcgaccgcag gagcgatctt
      241 aacgatcaag cgcggatcaa acggttttgg aatgatgtat tccggaccaa agctcagatc
      301 ctgatcgcca tacgctgaag ccaccacttc gctctgttcc gcatgggcga gttctgcaat
      361 cgcacgtacc gccgccagtt tcatctcttc gttgatggcg gttgcgccaa cgtccagcgc
      421 gccacggaag atgaacggga agcacaggac gttgttcacc tggttcggat agtcagaacg
      481 accggtgcaa atgatggcat ccggacgcac ttctttcgcc agcggcggca gaatttccgg
      541 ttccgggttc gccagcgcca ggatcattgg cgcacgagcc attttcttca ccatttcctg
      601 ggtcagcact ttcgggccgg aacatccgag gaaaatatcc gcgccttcaa tcacatcatc
      661 gagggtacgt ttgccgtcgt ccaccaccgc atatgcggct ttggtttccg ccatgtttgg
      721 ctcacggccc tgatagataa cgccttttga atcgcaaacc acgatgttat gtttttgcag
      781 acccagcgct accagcaggt tcatacaggc gattgctgcg gcacccgcgc cggaaaccac
      841 catccgcacg tcggagatgt ttttctccac cacgcgcaag ccgttgagga tggcggcagt
      901 gctgatgatt gccgtgccgt gctgatcgtc gtggaatacc ggaatattca tccgctcgcg
      961 cagtttctgt tcaatataga aacattctgg cgctttaatg tcttcgaggt tgattccgcc
     1021 gaaggtcggt tcgagcgcag cgacaacttc aataaatttg tccgggtcga gttcatcaac
     1081 ttcaatgtca aatacatcaa tcccggcgaa tttcttaaac agaacgccct tgccttccat
     1141 caccggtttg ccagccagcg cgccaatgtt gcctaacccc agcaccgccg taccgttaga
     1201 gatcaccgcc accaggttac cgcgcgcggt atatttgtag gcttttaacg ggtctttttc
     1261 gatttcaaga caaggtgcgg caacgcctgg tgagtaggcc agcgccagat cgcgctgcgt
     1321 tgccagaggc ttggttggag aaacctggat tttccctgga actggaaatt catggaaatc
     1381 aagtgcactt tgttttaact ggtcatccat ttggttgttc ctttcacgta acgttcacaa
     1441 ataaagtgtg tgggcaacag cccctgccca caacgtggcg cacattatta ccccgccgga
     1501 gtctacagac tttgagcaag tccaaactct caccattaat ataatgtttt ggtaataatc
     1561 ctataacact gatgttacct gcttaatcca gcaataccat gcctgtctgc tatgcttttt
     1621 tgatgcgttt agcgaaattt ctcagaagtg tgaattaacg cactcatcta acactttact
     1681 tttcaaggag tatttcctat gaacgagtta gacggcatca aacagttcac cactgtcgtg
     1741 gcagacagcg gcgatattga gtccattcgc cattatcatc cccaggatgc caccaccaat
     1801 ccttcgctgt tgctcaaggc tgccggatta tcacaatatg agcatttaat agacgatgct
     1861 atcgcctggg gtaaaaaaaa tggcaagacc caggaacaac aggtggtcgc agcgtgtgac
     1921 aaactggcgg tcaatttcgg tgctgaaatt ctcaaaatcg tacccggtcg cgtgtcaaca
     1981 gaagttgatg cacgcctctc ttttgataaa gaaaagagta ttgagaaggc gcgccatctg
     2041 gtggacttgt atcagcaaca aggcgttgag aaatcacgca ttctgatcaa actggcttcg
     2101 acctgggaag gaattagcgc ggcagaagag ctggaaaaag aaggtattaa ctgcaacctg
     2161 acgctgctgt tttcttttgc ccaggcgcgg gcctgtgcgg aagcaggcgt ttttctgatt
     2221 tcgccgtttg tcgggcgtat ttatgactgg tatcaggcac gcaagccgat ggacccgtat
     2281 gtggtggaag aagatccggg cgttaaatcg gtgcgcaata tctacgacta ctataagcaa
     2341 caccactatg aaaccattgt gatgggcgcg agcttccgtc gcaccgaaca aatcctcgcc
     2401 ttaaccggct gcgatcgact gactatcgca ccgaatttgc tgaaggagct gcaggaaaaa
     2461 gtttcgccag tggtacgtaa attaatccca ccttctcaga cgttcccacg cccagctccc
     2521 atgagcgaag cggagttccg ttgggagcac aatcaggatg cgatggcggt agaaaaactg
     2581 tctgaaggca ttcgtctgtt cgccgttgat caacgcaaac tggaagatct tcttgccgcc
     2641 aaactataaa ccagccacgg agtgttatat gtcccgaaaa gaccttgcca atgcgattcg
     2701 cgcactcagt atggatgcgg tacaaaaagc caactctggt catcccggcg cgccgatggg
     2761 catggctgat attgccgaag tgctgtggaa cgattttctt aaacataacc ctaccgaccc
     2821 aaccgggtat gatcgcgacc gctttattct ttccaacggt cacgcgtcga tgctgctcta
     2881 cagtttgctg catctgaccg gttacgacct gccgctggaa gagctgaaga acttccgtca
     2941 gttgcattcg aaaaccccag gccacccgga gattggttat acgcccggtg ttgaaaccac
     3001 caccggtcca cttggacaag gtttggcgaa cgccgtcgga ctggcgatag cagagcgtac
     3061 actggcggcg cagtttaatc agccggatca tgaaattgtc gatcacttca cctatgtgtt
     3121 tatgggcgac ggctgcctga tggaaggtat ttcccacgaa gtctgttcgc tggcgggcac
     3181 gctaggactg ggcaagctga ttggttttta cgatcacaac ggtatttcga ttgatggaga
     3241 aaccgaaggc tggtttaccg acgatacggc aaaacgtttt gaagcctatc actggcatgt
     3301 gatccatgaa atcgacggtc acgatccgca ggcggtgaag gaagcgatcc ttgaagcgca
     3361 aagcgtgaaa gataagccgt cgctgattat ctgccgtacg gtgattggct ttggttcgcc
     3421 gaataaagca ggtaaggaag aggcgcacgg cgcaccactg ggggaagaag aagtggcgct
     3481 ggcacggcaa aaactgggct ggcaccatcc gccatttgag atccctaaag agatttatca
     3541 cgcctgggat gcccgtgaaa aaggcgaaaa agcgcagcag agctggaatg agaagtttgc
     3601 cgcctataaa aaggctcatc cgcaactggc agaagagttt acccgacgga tgagcggtgg
     3661 tttaccgaag gactgggaga aaacgactca gaaatatatc aatgagttac aggcaaatcc
     3721 ggcgaaaatc gctacccgta aggcttcgca aaatacg
//
LOCUS       DADMIB010000262         3736 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.269, whole genome shotgun sequence.
ACCESSION   DADMIB010000262 DADMIB010000000
VERSION     DADMIB010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3736
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.269"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..859)
                     /locus_tag="JNZ89_004261"
     CDS             complement(<1..859)
                     /locus_tag="JNZ89_004261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008786992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HAY8937929.1"
                     /translation="MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPI
                     ADSVLTDFKVAATRILSPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNG
                     IPVDSVEIDMSVDPHKAREMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVS
                     IIEPVVRPPRRGWDFDRESAIVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQL
                     NDQMKMPWVILSSGVDADIFGRAVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDV
                     SVPRLQRLAE"
     gene            complement(884..1762)
                     /gene="yihU"
                     /locus_tag="JNZ89_004262"
     CDS             complement(884..1762)
                     /gene="yihU"
                     /locus_tag="JNZ89_004262"
                     /EC_number="1.1.1.373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001318159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfolactaldehyde 3-reductase"
                     /protein_id="HAY8937930.1"
                     /translation="MATIAFLGLGQMGSPMANNLLQKGHSLQVFDVNAQAVDALVTQG
                     ATAAQTQAEAAAGAEFIITMLPNGDIVRQVLLGEKGVCEAVSSDALLIDMSTIHPLQT
                     DALIRELQEKGISMMDAPVGRTSVNAIDGTLLILAGGTDEQIARARPILMCMGNELVE
                     AGGPGMGIRVKLINNYMSIALNALSSEAAVLCESLGLNLDVAIKVMSGTAAGKGHFTT
                     TWPGKVLKGDLSPAFMVDLALKDLRIAVDVARETGTPLNMGIAAESYYAAASQDGKGR
                     QDWSALLNQVRQQAGL"
     gene            1935..2831
                     /locus_tag="JNZ89_004263"
     CDS             1935..2831
                     /locus_tag="JNZ89_004263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000196715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY8937931.1"
                     /translation="MTRIACVGITVQDRIYSLPTLPEGGGKYQANHYLEIGGGPAATA
                     AVAIAKLGVEVDFIGRVGDDSCGNTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQH
                     GERIIVNYPSPDLGTDAEWLEAIDFSRYNLILADVRWHSGTEKAFSLARLAGVTTLLD
                     ADMTPQDISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGS
                     LWIEDGHLCQQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCT
                     QPGGRAGIPNREQTESFLSLYA"
     gene            2871..3659
                     /locus_tag="JNZ89_004264"
     CDS             2871..3659
                     /locus_tag="JNZ89_004264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY8937932.1"
                     /translation="MSIIEVTGNPRHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRD
                     IRKLSEQGLITRHHGGAGRVSSVMNTAFEQRELSLTAEKRAIAEAVADYLPERCTVFI
                     TIGTTVEAVARALLNRRDLRIITNSLRVAQILYKNQDIEVMVPGGTLRAHNGGIIGPG
                     AVDFIEGFRADYLITSIGAIEHDGTLLEFDLNEALVARTMIKHARNTLLVADHTKFAA
                     SAAVSIGNARNVRAFFTDAPPPNSFCQLLSEENVELVVAEQEVS"
BASE COUNT          961 a          955 c          902 g          918 t
ORIGIN      
        1 tttctgccaa ccgttgtaaa cgaggaacag agacatcgcg cagcatagtt tgtggatctt
       61 gtgcaccaac aaccgacgcc caaaccgctc gtccagccag gaagcccgac gcaccacctt
      121 tcatggcaat acttactgca cggccaaaaa tatcggcatc aacgccagaa gaaagaatta
      181 cccacggcat cttcatctga tcgttaagtt gctgacaggc ggcaagtaag gttttttcat
      241 cgcctttgcc ccctaatggc atctcggctt tgtaaagatc agcctctgtt ccaccaagct
      301 ctgcggcggc ggcaacaatg gcgctttcac gatcaaagtc ccaaccgcga cgaggtggac
      361 gcaccacagg ttcaataatg ctcaccagcc cggcactacg gcagcgacga acaaatttat
      421 caaccattgc cagacgttcc tctgcgggtt catcttcacg ccagagtaca agtaatttca
      481 ttgccttagc ccccatttca cgggctttat gcgggtcgac ggacatatct atttcaacgc
      541 tatcaaccgg gatgccatta cctgggataa aaagatcggc agcgacaatc aggccgcaag
      601 aattagcaac agcgccctgc tcgactattt gctcaagaca aaattgttta tccgccagaa
      661 cggcagaagc ataaggagaa aggattcggg tcgcggcaac tttaaaatcg gtgagtacac
      721 tgtcggcgat gggttttggc tgccctgctg ccgcaaacat caagcgcatg gcctcacgct
      781 gatcgacagc taacatggca aatccaccac ctgggcggga gatatctttc agcgtaaatg
      841 gggtgaagtg ggatgacata gaaactcctg ttaatagata aaattaaaga ccagcctgct
      901 ggcgaacctg atttagcagg gcactccagt cctgccgccc tttgccgtct tgacttgctg
      961 cagcgtaata actttctgct gcaatcccca tattgagcgg tgtccccgtc tcccgagcga
     1021 cgtcaactgc aatacgcaga tctttcaacg ccagatccac catgaaggcg ggtgaaagat
     1081 cgcctttcag cactttgcca ggccaggtgg tcgtaaaatg tcctttccct gctgccgtac
     1141 cactcatcac cttaattgcg acatcaagat ttaatcccag tgactcacat aacacagcgg
     1201 cctcggagga cagcgcatta agcgcaatgc tcatatagtt gttaattagc ttcacgcgga
     1261 tccccattcc tgggccgcca gcctcgacca gctcattacc catgcacata agaatcgggc
     1321 gtgcacgtgc aatctgctca tcagtgccac ccgctaaaat cagcaatgtg ccatcaatcg
     1381 cattcacgga cgttctgccc acgggagcgt ccatcatact gatgcctttt tcttgtaact
     1441 cccgtattaa tgcatcggtc tgtaagggat gaatagtcga catatcaatc aataacgcgt
     1501 cagatgaaac agcctcacag acgccttttt cccccaacag aacctgtcga acaatgtcac
     1561 cattgggaag catagtgatg ataaattcag cgcctgctgc tgcttccgct tgggtttgtg
     1621 ccgcagtggc cccctgcgta actagcgcat cgacggcctg tgcattgaca tcaaatacct
     1681 gcaatgaatg ccctttttgc aatagattgt tagccattgg gctacccatc tgccccagcc
     1741 cgagaaatgc aatggttgcc atgaatactc tcctgtctga cattgacaaa ataatgacaa
     1801 ttgaaaattc gtttttgtct gtttttgagc atatttgtga tttatgttca aaaacacgac
     1861 acgcatcact aatttgatca tttgcgtcat ttaaattgac caaagacgac aaaattaaac
     1921 aggacaagac aaatatgacc agaattgcat gcgtgggtat cacagttcag gacagaattt
     1981 attctttgcc cactctgccg gagggcggcg ggaaatatca ggcaaatcat tatcttgaga
     2041 ttggtggcgg cccggcagca acagccgctg ttgcaatcgc aaagcttggc gtggaggttg
     2101 atttcatcgg tcgcgtcggc gatgacagtt gtggaaatac cttacttgca gaacttgagg
     2161 gttggggcgt caataccgca ttttgccgcc gatatcctaa cgcccgttcg tcgcaatcag
     2221 cgatcctcgt tgatcagcat ggcgaacgga ttatcgttaa ttatccaagt cctgatctcg
     2281 gtactgatgc cgaatggtta gaagcgatcg atttctctcg ttataatctg attctggccg
     2341 atgttcgctg gcatagcggt actgaaaaag cattctcgct agcgcgcctt gcgggtgtga
     2401 caacgctttt agacgccgat atgacaccgc aggatatttc tccacttgtc gcgcttgccg
     2461 atcacgccgt gttctcaaca ccagggctga aacgcatgac tggcctgcag tctcctgaag
     2521 aaggtttgtt ccaggcaacg acacaaacag caggtaaagt gtatgttacg ctgggttctg
     2581 aaggatcgtt gtggattgaa gatggtcatt tgtgtcaaca ggaggcattt tctgtcaatg
     2641 tggttgatac cactggagca ggcgatgttt ttcacggcgc actcgcggta gcgttggcag
     2701 aaaaaatgcc aacaaaagag gctattcgtt ttgccagtgc ggttgccgcg atgaaatgta
     2761 cccagcctgg cggtcgggcc ggcattccta atcgtgagca aaccgaatca tttttgtcac
     2821 tttatgcgta aaatggtaaa catctaccga ggaggggcaa gggagtattc atgagtatca
     2881 tcgaagtgac aggtaatcca cgccatgacc aactcgttca tctaatcgca gaacgcggtt
     2941 atatgaatat tgaagaactg gcacaactgc tggatgtttc aacgcaaacc gtgcgccggg
     3001 atatccgaaa actcagtgag cagggcttga tcacccgtca tcatggaggg gccgggcgcg
     3061 tctccagcgt catgaatacc gcttttgagc aacgggaact ttcgctcacc gccgagaaac
     3121 gggcgatcgc tgaggcagtc gccgattacc ttcccgaacg ctgtaccgtc tttatcacca
     3181 tcggtacaac cgtagaagcc gttgccaggg cattactcaa ccggcgtgat ttacgcatta
     3241 tcactaacag cctacgtgtg gcacagattc tttataagaa tcaggatatt gaagtgatgg
     3301 tgccgggagg cactttacgc gctcataacg gcgggattat cggcccagga gccgtggatt
     3361 ttattgaagg cttccgcgca gattatttaa tcaccagtat aggtgccatt gaacatgacg
     3421 gcaccctact ggaatttgat ctaaatgaag cgttagtcgc gagaacgatg attaaacatg
     3481 cgcggaatac attgttagtg gccgatcata cgaagtttgc cgcgtctgct gccgtttcaa
     3541 ttggcaatgc acggaatgtc agggcttttt ttactgatgc cccgcctccc aattctttct
     3601 gccagttgtt aagtgaagag aatgttgaac tggtggttgc cgagcaagaa gtatcctgaa
     3661 attgaaattt cggaaaatcc gctgggaatt tcagcggatt ttgttttcca taagcaaaaa
     3721 aaacctgcca gcgatg
//
LOCUS       DADMIB010000263         3723 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.270, whole genome shotgun sequence.
ACCESSION   DADMIB010000263 DADMIB010000000
VERSION     DADMIB010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3723
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.270"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            37..264
                     /locus_tag="JNZ89_004265"
     CDS             37..264
                     /locus_tag="JNZ89_004265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HAY8937933.1"
                     /translation="MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDS
                     AWRYVTILDLPFSLVFDTLLLPIDIHHGPYE"
     gene            complement(265..639)
                     /locus_tag="JNZ89_004266"
     CDS             complement(265..639)
                     /locus_tag="JNZ89_004266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309456.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HAY8937934.1"
                     /translation="MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQD
                     GDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE
                     FQLEPPLDTEEGRAAADEWDER"
     gene            complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="JNZ89_004267"
                     /pseudo
     CDS             complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="JNZ89_004267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtG"
     gene            complement(2118..3038)
                     /locus_tag="JNZ89_004268"
     CDS             complement(2118..3038)
                     /locus_tag="JNZ89_004268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HAY8937935.1"
                     /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL
                     GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR
                     RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL
                     IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ
                     AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV
                     VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY"
     gene            3263..3723
                     /locus_tag="JNZ89_004269"
                     /pseudo
     CDS             3263..3723
                     /locus_tag="JNZ89_004269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415573.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
BASE COUNT          915 a          952 c          945 g          911 t
ORIGIN      
        1 cgttatgccg gtattttttt acggaagagg tatcaaatgc gtttaattgt ggtgagcatc
       61 atggtgacct tgctgagtgg ctgtggcagc attattagtc gcactatacc ggggcagggg
      121 catggcaacc aatattatcc cggtgtgcaa tgggatgtgc gtgactccgc ctggcgttat
      181 gtcacaatcc ttgatctgcc attctccctg gtttttgata ctttactgct gccgatcgac
      241 attcatcatg gcccgtatga gtgattaacg ttcatcccac tcatcagctg ctgcgcgtcc
      301 ttcctcggta tccagcggtg gctcaagctg aaattccccc tcgtcccatt catgtaatgt
      361 attctcttcc tgccactcct ggcgtatctc tatctcatca tagtcgccat caaaaacact
      421 ttgcgcggct tcaccgctaa gcataggtaa acattcacct tcttcccctt cgtcggcaaa
      481 aaactcaact tgccacatga tgtcgccgtc ctgcaaaacg tatttttggg cattgaactg
      541 ttgcacattc gcatcttcgg cgtcgatgcc ggggttgtct gcaagaaatt cttcgcgtgc
      601 agcgtcaatg gcttcttcaa gcgttgcgta catggtcatc acgattctcc ctttgagttg
      661 atgaggtttc agggaaaagg atagctgatt ctccgctttt gcaagtatga aaggcgaaaa
      721 atcagttcga tacctggggt attcgacgac gacgtagact gttccatgaa tagactgcgt
      781 tgaataacac tacgccagcg gtgacgagaa ataccgctct gaaaccgtag ttcgctgaaa
      841 tcgctgctcc catcaatggt ccggtaacgt tgccaatatc acgaaacgat tggttatagc
      901 tgaagatacg cccggcgatc tggttgctcg agttgtaaac caacaatgtc tgtacggcgg
      961 ggagtagtgc accatcggcg gcaccgagca aaaaacgtaa aatcccaagt tgcaatggcg
     1021 tctgaacgta agacattggg atcaacagca gtacagaaaa gatcagcgct gtaatcagga
     1081 tcttttcggg tccgattcga tcgccaagtt tgccgagtcg tggtgcactt agcagagccg
     1141 ccacgcctgg caccgaggcg atcatgccac tgataaaggc gacgttactg acgttacccg
     1201 ccagttcgcg gacatacagc gtcagaatgg gggcaattga gcccgtcgcc acctggatga
     1261 ttaacgtagt gacaaacagg ctgagtacca gtttcgggtt tttaagtgat gtcaccactt
     1321 cccgcatgtg cagcatctct tttttgctga ccggctggaa tttttctctg atgcaaaaca
     1381 gggtgacgaa aaagcagagt atgagcacac tggtggtaat aaagaatacc ggacgtaagc
     1441 cgtagctatc ggcgagcagg ccgccagcca ttgggccgag caacgcacca ccaacgccgc
     1501 ctgtggagag cgtacccagc gcccagccgc ttttattacg cggtacttgt gtggcgataa
     1561 gagcattagc gttggggaca aatccgccaa gtaacccaag aagcgcccgc aggatcaaaa
     1621 actgccagat attttgtgcc agccccatca acaccatcac gatgcccatg ccgagggcag
     1681 agcgtaatag catgagtttt cggcctttac ggtcggcgag tccaccccaa aacggtgagg
     1741 cgatggccga aaataaaaat gtaatgctga agacaatacc ggaccatatt cagggcggag
     1801 tgaccggtaa cgccaagctg ctcaacgtag aggggtaaga agggcattac cagactgaag
     1861 gcggcaccgg taagaaaaca gcctagccag gcgacgatca ggtttcgttt ccagtttata
     1921 ggggtgtcat tttcacaggg tgacatagca atccgctgtt ggtgcgccag gcgcggtgaa
     1981 cataagaaga aaagataagc acactaatta tgcgcccgac ttccaggggg cgcaatccag
     2041 agagctttta tcgctaaatc agggggattt gctgtggtaa tgccggatgc cattctgaag
     2101 catccggcag gggagattta atagcgtgaa ggaacgcctt ccgggcgtgt tttaaagcga
     2161 cggtgtaacc acatatactg ctctggtgcc atcatgatgc atttttcgac cactttgttc
     2221 atccacgcgg cggtagtttc ggcatcatcc agtggcggag aacactctgg cggcagcata
     2281 atcaattgat accctttgcc atctggctta cggcgtggaa cgaagggcac cagacatgcg
     2341 ccggacatcc gtgccagcat ccaggttccg gtcgtggtcg cagcctgctc aacggcaaat
     2401 aacgggacga aaacgcttga gcgcgggccg taatcatgat ccggtgcgta ccagaccact
     2461 tcgccttttt tcagggcttt aatcatgcct tttaaatctt tgcggtcgag catcgattta
     2521 tttgagcgca aacggcccca ggtttgtagc cagtcaatca gtggattatc gttcgggcgg
     2581 taaacgccaa tccccggttc ctgcatacca aactgccgcg cacccagctc cagtgtcaga
     2641 aaatggatgc caactaacag gatgccgcgt ttttgcgcct gcacgtcacg aatgtgttcc
     2701 atgccgatca cttccgtcca gcgcgcgatt cggcggtccg gccagaacca cgccatgccg
     2761 gtttccatca ggcccatgcc aacggattcg aaattcttca ccaccatttt acggcgttct
     2821 tgttcgctca tttccgggaa gcacagttcc aggttgcgat gcacaatttt tgcgcgtcgt
     2881 ttcataaaac gtaacgccag ttttcctaat ccacaaccga ggcggtagat aaccgggtag
     2941 ggcaattgca cgactaacca aagtacgcca atacccaacc aggttaacca ataacgcgga
     3001 tgaagcagtg cggtggagaa cttgggtaga ttcgtcatat caatcctgtt tttcaaccta
     3061 ttcgggcaat tgtatgtatt gtcgcatttt ttcgcccgca accaaaattt gtggctgaag
     3121 actgggcgaa attgccgcgc ttgtaaataa caaataattt ttaatgcgca aatgtagcgt
     3181 aaaatgtgtg gatgttaatt atcgataatt gctatatcat gccgcggatt tttactttcc
     3241 catctcgcag gaaccgtaca ccatgccagt gttacacaac cgcatttcca acgacgcgct
     3301 aaaagccaaa atgttggctg agagcgaacc gcgaaccacc atttcgtttt acaagtattt
     3361 ccacatcgcc gatcctaagg cgacccgtga cgctttatat cagctgttta ccgcgctgaa
     3421 tgtttttggg cgagtgtatc tggcgcatga gggcattaac gcgcaaatca gcgtacctgc
     3481 gagcaatgtt gaaacatttc gcgcgcagct ctgccttcga cccggcttta gagggtttac
     3541 gcctgaatat cgcgttggat gatgacggga aatccttctg ggtactgcgc atgaaggtac
     3601 gtgatcgcat tgttgccgac ggtattgacg atcctcactt tgatgccagc aatgttggtg
     3661 agtatctgca agcggcggaa gtgaacgcca tgcttgacga tcccgatgca ctatttatcg
     3721 aca
//
LOCUS       DADMIB010000264         3716 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.271, whole genome shotgun sequence.
ACCESSION   DADMIB010000264 DADMIB010000000
VERSION     DADMIB010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3716
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.271"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            367..678
                     /locus_tag="JNZ89_004270"
     CDS             367..678
                     /locus_tag="JNZ89_004270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000483533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HAY8937936.1"
                     /translation="MFNVITHPAALDELLELPDNLRGRMTRLIERLEQEGNKMKMPHS
                     RVIGGGLFELRVGDKNIARTLYAYATGNEIYLLHAFVKKTQKTPTKAIEIARMRLKEM
                     N"
     gene            678..965
                     /locus_tag="JNZ89_004271"
     CDS             678..965
                     /locus_tag="JNZ89_004271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY8937937.1"
                     /translation="MKVKGVPFSQVKQKLLSTPEAVKGYEDADKELEMVEMLYEMREK
                     AGLTKSALAERMGLRPSAISRLESNPLGASMKTLTKYAHACGATIDIHAVY"
     gene            complement(1502..2689)
                     /locus_tag="JNZ89_004272"
     CDS             complement(1502..2689)
                     /locus_tag="JNZ89_004272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HAY8937938.1"
                     /translation="MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTT
                     LMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPDCPWQHIVF
                     TLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPRIFTVIHTWGRDQQWHPHI
                     HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVMPDALAAEGSSKR
                     EWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPVSRLEHYAGQDEIGLR
                     YNSHRTKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITE
                     TVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMR
                     WCG"
     gene            complement(2689..3054)
                     /locus_tag="JNZ89_004273"
     CDS             complement(2689..3054)
                     /locus_tag="JNZ89_004273"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937939.1"
                     /translation="MARSAKPRKRKPASQRSKLPRYVVKLHEDDFFDEEDAEVLRFDS
                     FDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATILSGISAGG
                     MYCPECGTVHWPDGVAPPF"
     gene            3073..3468
                     /locus_tag="JNZ89_004274"
     CDS             3073..3468
                     /locus_tag="JNZ89_004274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8937940.1"
                     /translation="MTLPVFITVIADHDKPQPSGCLLELQLNKGEYRHKLPRWIFFAN
                     QGEFTTGDYEEIMNKASALSLVSNAILYWNTSRISNIVEGLRENGEVIDDDVLAHISL
                     LPYKHVLPNGTYFVDGEPYGTEPTERAKP"
     gene            3498..3581
                     /locus_tag="JNZ89_004275"
                     /pseudo
     CDS             3498..3581
                     /locus_tag="JNZ89_004275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052676.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
     gene            3581..3676
                     /locus_tag="JNZ89_004276"
                     /pseudo
     CDS             3581..3676
                     /locus_tag="JNZ89_004276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858351.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
BASE COUNT          976 a          968 c          881 g          891 t
ORIGIN      
        1 ctattagcgg ttaccagcgc cccaccagac ccggtgacat caccccccgg atcatggacg
       61 actgggggca gtaatcatgc cgggtctggc tggctaacac cccattataa ggggtacgaa
      121 taaagtaacg ggggtaaggt gaaatctgtc aatcagtacc ggcttacgcc gggcttcggc
      181 ggttttactc ctgtgccata tgcaacaacg gagtgccgcc ttccatgccg ctaacgcggc
      241 atcaaaaaat ccctcttctc cagttgcccc cctccgaact cagagtatat tttcatttat
      301 tgatgaaatt tactgtttgc gcaattttcc tgttttagtg tattttgtca ttctggaggc
      361 tataatatgt ttaatgtgat tactcacccg gccgcactgg atgaacttct agaattacca
      421 gacaatctgc gtggtcgtat gaccagactg attgaacggc tggaacagga aggtaacaaa
      481 atgaaaatgc ctcacagccg tgtaattggc ggagggcttt ttgaactgag agtcggggat
      541 aaaaatatcg caaggacact gtacgcttat gcaacgggta acgaaatcta tctgctgcat
      601 gcatttgtga aaaaaacgca aaagacacca acgaaagcta ttgaaattgc caggatgcgt
      661 ctgaaggaga tgaactgatg aaagtaaaag gtgttccatt cagccaggta aagcaaaaac
      721 tactcagtac tccagaagct gtcaaagggt atgaggatgc tgacaaagaa ctggagatgg
      781 tggaaatgtt atacgaaatg agagaaaaag cgggattaac aaagtcagca ctggccgaac
      841 gaatggggtt acgcccgtca gccatcagtc gcctggaaag taacccttta ggggccagca
      901 tgaaaacttt gacaaaatat gctcatgcct gtggcgcaac catcgatatt cacgctgtct
      961 attgaggggt ccgcttggaa ttcggaaaat aaaccacgtt aagactattt tttagataaa
     1021 tgactttcag gaatcgccaa gatggcggga taacagcggt tttggtgtcc taaatcgtac
     1081 aattctgtac atccacgcaa gggaatgtac ggaagtaagc cagacggtta tcggacggtc
     1141 agaacatttc gtacagcctt tacgttcagt gagttagctg gcctggacgt aaccactcgt
     1201 tagctcaatt ctcttagcgt gggaaaattt ccgaattcca agcggacccc tttatccttg
     1261 ccccgctgaa tgaggaaacg ctgttccggg ggattatgct gaacgtcttc cgttcatcga
     1321 taggaattaa aaccccaaaa agattaaaaa acaccacaaa acggatgttt cttcaacacc
     1381 acttttgctc atatgaacgg aaccgacgat taaactggat ggctctgatt gattcagggt
     1441 atgaatggcg gttttttgct ccgtttccct caaaatggac gctacttacc ctctgcggct
     1501 ctcagccgca ccaccgcatc cgggccagcg gctcatgcat caggacctgc tctgccagac
     1561 ggtagccccg cttcagcccc gtaaaacgca tctgactccc gcacagcacg cacttcagcg
     1621 ggtcaacctt cagtaacctc tgatacatcc ctctccaggt gatttgcatc gccgtttttc
     1681 tcactgtctc cgttatgatg tacaccactt cttccagtaa ccgccgtttc gccggactca
     1741 gaaaaccgta gtacctcacc atacggaacc ccttatccgc cacatgccag gagaaccttt
     1801 ccatgaactc atctccactc atcaacaggt attcttcccg ttttgttcgg tgactgttgt
     1861 aacgcagtcc gatttcatcc tgaccggcat aatgctccag acgactcacc ggcaccggtg
     1921 gctttttcag gtaagagcca aagtacaccg ccacatgggt ggcattatcc atcacccggg
     1981 atacgttgac attccagcca cggcggtaat gcgtgtccag gaagcgattc cattcccgtt
     2041 tactgcttcc ttctgctgcc agcgcatccg gcatcaccag gtcagggtat ttccgtgaca
     2101 gtaaccgtgt tatccggtag cgccacatgc tcatcacctt acgggcgtaa aaatgaagat
     2161 ttttccaggt gtggcccgac gtcacaccac cggcagttgt cgataaatgg atatgcggat
     2221 gccactgctg gtcacgcccc catgtgtgga tcaccgtgaa tatcctcggc tccacatctg
     2281 cctgatggca gatttccagt atcacatccg ctgcaatgcg gctcatctct gccagcaacc
     2341 accggttgtg gaacaccagg gaccagtact ggcagggtaa cgtgaacaca atatgctgcc
     2401 atgggcagtc ggggaccagg ctcagcagat actgtatcca ctgtgcgcca gccttcaccc
     2461 cgcagtgcgg gcaggagcgg cttttacacc ggaagcagac cttttttgta tggcaacagt
     2521 ccggtgatga acagcaccac tgtgtatacc ccatcagtgt ggtcccgcac gccatgattt
     2581 tggtcaccga ctcaatcacc accggacgta ctgccccttc cggctgcttc tccagccagt
     2641 taagccagcg gtttccctgc tgaaagatat cggcaaaacg gggaagcatc agaagggcgg
     2701 ggcgactccg tccggccagt gaaccgtgcc acactccggg cagtacatac cgccggcgct
     2761 gataccggaa agaatggtcg caaattcccg ctccgtgcag cgggcaattt ccggataccc
     2821 ttcgtcatca acacgtacaa accagaagac cagttttttg tttccggcat ccacaaagaa
     2881 cggaatattc aggtctgcgc aacactcaac ggcatcatca aaactatcaa agcgcagaac
     2941 ttctgcgtct tcttcgtcaa aaaaatcatc ttcgtgaagc ttcacgacat agcggggaag
     3001 tttgcttctt tgagaggcgg gtttacgttt acggggttta gctgaacggg ccatataacc
     3061 acctgaaaga caatgacatt gcctgttttt ataacggtaa ttgcagacca tgacaagccg
     3121 cagccgtcag gctgcctact cgagcttcag ctcaataaag gcgaatatcg acataaatta
     3181 ccccgatgga tcttttttgc aaatcagggt gaattcacga ccggtgatta cgaagaaatc
     3241 atgaataagg ccagcgccct gagtctggta tcgaatgcaa tcctgtactg gaatacatca
     3301 agaataagca atattgttga agggttacgt gaaaatggtg aggttattga tgatgacgta
     3361 ttagcccata tatcattact gccctataaa cacgtattac ctaatggtac ttattttgtt
     3421 gatggagaac cttacggtac tgagcctacc gaaagagcaa aaccgtaagt ttctgttcaa
     3481 atgctcccgc tggtccatcc ggacagatta tcgaccatca ggctgtacag gcctgggcgg
     3541 acagcctcag tactgacaat ccgttaccgg tgccacgctg atggaacaga agtggaccag
     3601 taaggcgctt tctgatttgg cgcggttata tgattttctg gtgctggcca gtaaacctgc
     3661 tgccgccaga atggtacacg tataggaaat tgaaaaacca gacgataccg ctgtcc
//
LOCUS       DADMIB010000265         3681 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.272, whole genome shotgun sequence.
ACCESSION   DADMIB010000265 DADMIB010000000
VERSION     DADMIB010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.272"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(167..481)
                     /gene="fliE"
                     /locus_tag="JNZ89_004277"
     CDS             complement(167..481)
                     /gene="fliE"
                     /locus_tag="JNZ89_004277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HAY8937941.1"
                     /translation="MSAIQGIEGVISQLQATAMSARAQDSLPQPTISFAGQLHAALDR
                     ISDTQTAARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSM
                     QV"
     gene            696..2354
                     /gene="fliF"
                     /locus_tag="JNZ89_004278"
     CDS             696..2354
                     /gene="fliF"
                     /locus_tag="JNZ89_004278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body M-ring protein FliF"
                     /protein_id="HAY8937942.1"
                     /translation="MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAK
                     APDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGL
                     PKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPS
                     LFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLT
                     LSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTE
                     EQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPANNAPISTPPANQNN
                     RQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGK
                     PLPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQ
                     LLAAGRWLLVLLVAWLLWRKAVRPQLTSRAEAMKAVQQQAQAREEVEDAVEVRLSKDE
                     QLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINNDHE"
     gene            2347..3342
                     /gene="fliG"
                     /locus_tag="JNZ89_004279"
     CDS             2347..3342
                     /gene="fliG"
                     /locus_tag="JNZ89_004279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HAY8937943.1"
                     /translation="MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANV
                     TQISNKQLTDVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRD
                     TASGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLR
                     VATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV
                     REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLR
                     NMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV"
     gene            3335..3681
                     /locus_tag="JNZ89_004280"
                     /pseudo
     CDS             3335..3681
                     /locus_tag="JNZ89_004280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416450.2"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
BASE COUNT          927 a          968 c         1028 g          758 t
ORIGIN      
        1 ttcctatgag caaagcgaag acaaaacatg ttatcgcgtt tacggatcgt ggatggcaga
       61 aaactttcag gatcaggtat ccattttaaa ccagaaatag ggtgagtttg tcccatccat
      121 gccccacgcg ggcagatggg atgtaattac caacaggtta caaaacctac acctgcatgg
      181 acatcacttc ctgatacgcc gccaccagct tattacgcac ctgaatcccc atttgcatag
      241 aaactgaggc tttttgcata tcggtcatca catcgtttaa cgccacgccg ggttcaccga
      301 gggtgaattt ttctgcctgc gtgcgggcgg ctgtttgtgt atcgcttatg cgatcgagcg
      361 cggcgtgcag ctgcccggca aaactaatgg tcggttgcgg cagtgaatcc tgcgcacgcg
      421 cactcatcgc cgtagcctgt aactggctga taaccccttc aatcccctgt atcgctgaca
      481 ttttcgtctc ctggataatt tctggtagca aagcctacca gtaagtcaat aagacaaagg
      541 cgctaaatag caacaaaaaa acgggtttat tggcggatag aaaaaaacga aagcacaaat
      601 aatggcagcg tcaatttttc gagtttgctg acccgggagt gagtcttgtt ccactttgcc
      661 aataacgccg tccataatca gccacgaggt gcgcgatgaa tgcgactgca gcccagacaa
      721 aatctcttga gtggcttaat cgcctgcgtg cgaatccgaa aattccattg attgttgccg
      781 gttccgcggc agtggcggtc atggtcgcac tgatcctgtg ggcgaaagcc cccgactacc
      841 gcacattatt cagcaatctt tccgatcagg atggtggcgc aattgtcagc caactgacgc
      901 aaatgaatat tccttaccgc ttcagcgaag ccagcggcgc tattgaagtt ccggcagata
      961 aagttcacga gctgcgtctg cgcctggcgc aacaaggttt gcccaaaggc ggcgcggtcg
     1021 gtttcgaact actagatcag gaaaagtttg gtatcagcca gttcagcgaa caggtgaatt
     1081 atcagcgggc gctggaaggc gagctttctc gtaccatcga aactatcggc ccggtaaaag
     1141 gggcgcgcgt acatctggca atgccgaaac cgtctttatt cgtccgtgaa caaaaatccc
     1201 cttctgcatc ggtgacggta aatctattac ccggccgcgc actcgatgaa gggcaaatta
     1261 gcgccattgt acatctggtt tccagcgcgg ttgctggtct gccgccgggg aacgtcacgc
     1321 tggtggatca gggtggacat ctgttaaccc tgtccaatac cagcgggcgc gatcttaatg
     1381 acgctcagtt gaaatatgcc agcgatgtcg aaggccggat tcagcggcgt attgaagcga
     1441 tcctgtcgcc aattgttggt aacggtaata ttcacgccca ggtcacggcg caactggact
     1501 tcgccagtaa agaacaaacg gaagaacagt atcgccctaa cggtgatgaa tctcatgcgg
     1561 cgcttcgttc acgccagctt aatgagagcg agcaaagcgg ttccggttat ccgggcggcg
     1621 taccgggggc gttgtcgaat caaccggcac ctgcgaataa cgcgccaatc agcacgcctc
     1681 cggcaaatca aaataaccgc cagcagcagg cgagcaccac cagcaatagc gggccgcgta
     1741 gcacacagcg gaatgaaacc agtaactacg aagtcgatcg caccattcgt cataccaaaa
     1801 tgaacgtggg cgatgtgcaa cgtctgtcag tcgcggtagt ggtaaattac aaaaccttgc
     1861 cagacggtaa accattgcct ctcagcaacg aacagatgaa gcaaattgaa gatctgaccc
     1921 gcgaggcgat gggcttttct gaaaaacgcg gtgactcgct caatgtcgtt aactcgccgt
     1981 tcaatagcag tgacgaaagc ggcggagaac tgccgttctg gcaacagcaa gcgtttatcg
     2041 atcagttgct ggctgccggt cgctggttgc tggtactgct ggtggcgtgg ctgctgtggc
     2101 ggaaagcggt acgcccgcag ttaacaagtc gcgccgaggc gatgaaagct gtacagcaac
     2161 aggcgcaggc ccgtgaggaa gtggaagatg cggtggaagt ccgcctgagc aaagacgaac
     2221 aactccaaca acgacgcgct aaccaacgtc tgggggcaga agtcatgagc cagcgtatcc
     2281 gtgaaatgtc tgataacgat ccgcgcgtgg tggcgctggt cattcgccag tggataaata
     2341 acgatcatga gtaacctgac aggcaccgat aaaagcgtca tcctgctgat gaccattggc
     2401 gaagaccggg cggcagaggt gttcaagcac ctctcccagc gcgaagtgca aaccctgagc
     2461 gctgcaatgg cgaacgtcac gcagatctcc aacaagcagc taaccgatgt actggcggag
     2521 tttgagcaag aagctgaaca gtttgccgca ctgaatatca acgccaacga ttatctgcgt
     2581 tcggtattgg tcaaagctct gggtgaggaa cgtgccgcca gcctgctgga agatattctc
     2641 gaaactcgcg ataccgccag cggtattgaa acgctcaact ttatggagcc gcagagtgcc
     2701 gccgatctga ttcgcgatga gcatccgcaa attatcgcca ccattctggt gcatctgaag
     2761 cgcgcccagg ccgccgatat tctggcgttg ttcgatgaac gtctgcgcca cgacgtgatg
     2821 ttgcgtgtcg ccacctttgg cggcgtgcag ccagccgcgc tggcggaact gaccgaagta
     2881 ctgaatggct tgctcgacgg tcagaatctc aagcgcagca aaatgggcgg cgtgagaacg
     2941 gcagccgaaa ttatcaacct gatgaaaact cagcaggaag aagccgttat taccgccgtg
     3001 cgcgaattcg acggcgagct ggcgcaaaaa attatcgacg agatgttcct gttcgaaaat
     3061 ctggtggatg tcgacgatcg cagcattcag cgtctgttgc aggaagtgga ttccgaatcg
     3121 ctgttgatcg cgctgaaagg ggccgagcag ccactgcgcg agaaattcct gcgcaatatg
     3181 tcgcagcgtg ccgccgatat tctgcgcgac gatctcgcca accgtggtcc ggtgcgtctg
     3241 tcgcaggtgg aaaacgaaca gaaagcgatt ctgctgattg tgcgccgcct tgccgaaact
     3301 ggcgagatgg taattggcag cggcgaggat acctatgtct gataatctgc cgtggaaaac
     3361 ctggacgccg gacgatctcg cgccaccaca ggcagagttt gtgcccatgg tcgagccgga
     3421 agaaaccatc attgaagagg ccgaccccag ccttgagcag caactggcgc aactgcaaat
     3481 gcaggcccat gagcaaggtt atcaggcggg gattgccgaa ggtcgccagc aaggtcatga
     3541 gcagggctat caggaaggac tggcccaggg gctggagcaa ggtctggcaa aggcgaagtc
     3601 tcaactcaac aagcgccaat tcatgcccgg atgcagcaac tggtcagcga atttcaaact
     3661 acccttgatg cgcttgatag t
//
LOCUS       DADMIB010000266         3676 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.273, whole genome shotgun sequence.
ACCESSION   DADMIB010000266 DADMIB010000000
VERSION     DADMIB010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3676
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.273"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(118..2187)
                     /gene="glyS"
                     /locus_tag="JNZ89_004281"
     CDS             complement(118..2187)
                     /gene="glyS"
                     /locus_tag="JNZ89_004281"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HAY8937944.1"
                     /translation="MSEKTFLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGT
                     VQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
                     DQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
                     VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
                     YEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
                     LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
                     NTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
                     ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
                     RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
                     VSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDK
                     LEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV
                     ADISLLQ"
     gene            complement(2197..3108)
                     /gene="glyQ"
                     /locus_tag="JNZ89_004282"
     CDS             complement(2197..3108)
                     /gene="glyQ"
                     /locus_tag="JNZ89_004282"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HAY8937945.1"
                     /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
                     CLRALGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSL
                     KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
                     GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
                     LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
                     RTLTKAVAEAYYASREALGFPMCNKDK"
     gene            complement(3203..3502)
                     /locus_tag="JNZ89_004283"
     CDS             complement(3203..3502)
                     /locus_tag="JNZ89_004283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937946.1"
                     /translation="MMMNAFFPAMALMVLVGCSTPSPVQKAQRVKVDPLRSLNMEALC
                     KDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR"
BASE COUNT          849 a         1000 c          947 g          880 t
ORIGIN      
        1 cataaaatta atatatgaga taatctttat tcagcagaag attattaaag gttgctgtat
       61 tatttagcga taataaaaaa agcctgccag atggcaggct ttttaataac ggcgttatta
      121 ctgcaacagc gaaatatccg caacgcgcag gaacagttcg cgcagtttct ccagcatggt
      181 cagacggttg agacgcaatt ctttgtcatc aaccatgacc atcactttat cgaagaaagc
      241 atcaaccggc tcacgcagct ctgccagttc gaccagcgca tcctggtaac gaccttccgc
      301 aaagtacggc tccagcttgt cacgtagcac cacaacctgc atcgccagtt taatttcttc
      361 cggctctttc agggtagagg cattcacgcg gtcgctcagc acttcgtcag atttcgccag
      421 aatgttagat acacgtttgt tcgccgccgc cagtgcagca gctgcatcca gggtacggaa
      481 atgcgatacc gctttcatac gggcatcgaa atcagccgga cgagtcggac gacgcgccag
      541 taccgcctgg atggtgtcaa cggtgtaacc ttcgtcctga taccaggcgc ggaagcgacc
      601 gagcataaag tcgataacat catcaaccac gttggcgtta gtcagcttat cgccatacag
      661 acgcactgct tcttcggtca gcgtttgcag atcaaggttg aggttcttct caacgataat
      721 tcgcagcacg ccaagtgcgg cacgacgcag cgcaaacggg tctttgtcgc ctttcggatg
      781 ctgaccgata ccgaagatac ccgccagagt atccatctta tcagcaatcg ccagcgcaca
      841 agctaccggg ttggacggca ggtcatcacc ggcaaagcgc ggctgatact gctcattcag
      901 cgcgacggct acgtcttccg cttcgccatc gtgacgcgcg tagtgcatcc ccataacgcc
      961 ttgggtgtcg gtgaactcga agaccatgtt ggtcatcagg tcacacttag acagcaggcc
     1021 cgcacgggtt gcgtggttaa cgtcagcgcc aatctgttca gcaatccagc cagccagcgc
     1081 ctggatgcgg tcagttttgt cacgcagcgt acccagctgt tgctggaaca gcacggtttg
     1141 caggcgcggc aggttatctt ccagacgttt tttacggtcg gtattgaaga agaactcggc
     1201 atccgccaga cgtggacgaa cgactttctc gttaccagag ataatttgct gcggatcttt
     1261 cgattcgatg ttggcaacga agatgaagtt cggcagcagt ttgccatcgt tcgcatacac
     1321 cgggaagtat ttctggtcac ctttcatggt gtaaaccagg gcttcagccg gcaccgcgag
     1381 gaatttctct tcgaattttg cggtcagaac gaccggccac tccaccagcg aagccacttc
     1441 ttccagcagg ctttcgctta agtcagcgtt accgccaatc ttacgcgctg cttcttcggc
     1501 atcggcttta atcttcgctt tacgttcttc gtaatcggcg atgactttcc cgcgctcacg
     1561 cagaatttcc ggatactgat cggcgttgtc gatggtgaat tccggttcgc ccataaagcg
     1621 gtggccgcga atcacgcgat cggactgaat gcccagaata gttgccggaa tgactttgtc
     1681 gcccagcagc agggtcacgg tgtgcaccgg acgcacgaag tgcacgtcgc ttgcgcccca
     1741 acgcatcagt ttcgggatcg gcagtttcgc cagagaagtc gcaaccatat tcggcagcag
     1801 tgcttcggtg ctttcgccct tcacatgggc gcgatacagc agccattcgc ctttatcggt
     1861 agtcagacgc tcagcctggt caacggtaat accgcaacca cgcgcccaac cttctgccgc
     1921 tttgctcggt ttgccttcag cgtcgaacgc ctgggcaatc gccgggccgc gtttttcgat
     1981 ttcacgatcc ggttgcgctt ccgccaggtt agctactttc agcgccagac gacgcggagc
     2041 agcaaaccat tgaacggtgc cgtgtgcgag gccagcgtta tccagctcca cagtaaaatt
     2101 cgcagcaaag gactcaacca ggctgcgcag tgcttttggt ggcagctctt cagtgccgat
     2161 ttccaccaga aaagttttct cagacatagc cgcctcttac ttatctttgt tgcacatcgg
     2221 gaagccgagg gcttcacggg aagcgtagta tgcttctgcc actgctttgg tcagggtgcg
     2281 aatgcgcaga atgtagcgct gacgctcggt gacggagatg gctttacgcg catccagcag
     2341 gttgaagctg tgggcggctt tcagaatacg ctcgtaggct ggcagcggca gcggattttc
     2401 cagcgccagc agctgctgcg cttctttctc gtactgctca aagcaggtga acaggaagtc
     2461 cacatccgcg tattcgaagt tgtaagtgga ctgctccact tcgttctgat ggaacacgtc
     2521 gccgtaggtg gttttaccca gcgggccgtc gctccagacc aggtcgtaaa cgctgtctac
     2581 gccctgaatg tacatggcca gacgttccag accgtaggtg atctcgccgg taaccggttt
     2641 acactccaga ccaccaacct gctggaagta agtgaactgc gtcacttcca tgccgtttag
     2701 ccacacttcc cagcccagtc cccaggcacc cagagtcggg ttttcccagt tatcttccac
     2761 gaaacggatg tcgtgaatag tcgggtccat gcccagctct ttcagagaac cgaggtacag
     2821 ctcctgaata ttgtccggcg atggcttaat gaccacctgg aactgatagt agtgctgtaa
     2881 acggttgggg ttttcgccgt agcgaccatc ggtcgggcga cgagaaggct gaacataagc
     2941 agccgccatc ggttctggcc ccagcgcgcg cagacaggtc attgggtgag aggttcccgc
     3001 gccgacttcc atgtccaatg gttgaacaat ggtgcagccc tggcgagccc agtaatcctg
     3061 taaggtcagg atcaagccct ggaaggtcct ggtatcaaac ttttgcatat tatttcgtgc
     3121 tggatacgtg tggatttaaa ggaagggatc agtatacccg ctggatggaa gatatacagt
     3181 acgaaacggg aaaaagcagg gcttaacgca tggaaagatg caaaaaatgg ccatctgcgt
     3241 caaaagaaca gacaaactgc tctttacgga aggtataacc gcgcatttca tagcttccct
     3301 ggaactgttc gaaggcggtg acgtcgattt tttgctcgcc ggtgttataa cgttttgccg
     3361 cctgatcctt gcataacgct tccatattca acgaacgcag aggatcaacc tttacccgtt
     3421 gtgctttctg cacgggtgac ggtgtagaac aacccactag caccataagc gccattgccg
     3481 gaaagaaagc gttcatcatc attaaattac cgtctggttt gcaggtgagt cttattattt
     3541 atatcggtat agtggctgat atcttacgaa tttccttaag cctctataag ctgtagtgat
     3601 aaaactcaga ttattccagt gcgccaacca aatgatttat cggtcagact ttttttaacc
     3661 agatacagag acacag
//
LOCUS       DADMIB010000267         3587 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.274, whole genome shotgun sequence.
ACCESSION   DADMIB010000267 DADMIB010000000
VERSION     DADMIB010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3587
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.274"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(623..2332)
                     /locus_tag="JNZ89_004284"
     CDS             complement(623..2332)
                     /locus_tag="JNZ89_004284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858142.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HAY8937947.1"
                     /translation="MPLNKTFSSSIFSTKNSLSTDMSVNRDNRTITSSIMRVSNSSEL
                     IQFKNKTAPYFSEKRNVKVNINGVAKDIYGRQIVCRHLASYWEMNFMETNGKVNYQLL
                     STPDAIAKNVCLEKTEDFSKSPAYIYFVENKKWGTVITNFFYNMKKNGDFVRTLSACT
                     LNHQMALGLKIKRVQESEKWVVQFFDPNRTVTHKRTVFTCDSHFELSQLSAKDFFDDF
                     YWKIYGLEQPGQVIFEDRHNSPLTNTVKLLPDELINSRVIYHAITKNLTEVLFILMEK
                     YKNGEISQSKLVNLLATRSSDGTPAFYIALQNGCSDIIQVYGKILNMCNLSQETILTL
                     LAAVGANNVPGLCMSFMNGHVDTIKAYGEIVFKTPLTSDKRLYLLAAKDSHDLPGLFF
                     ALQNGHADSIRMFGSLLNKKMLSSEQIKELLKVKHGLFMALQNGHTKAIMAYGDILKI
                     LPPHQEYIDELLWIKNPNGTSGLFMAFYNGHTETIRAFCNILKNYSFTTRRLVEMLSA
                     TNKDGIPGVFVSVVNRDKETILEYCRIIKENNLEPDTIAEQFSKKMKKTFIEIINRFN
                     HFL"
     gene            complement(2764..3483)
                     /locus_tag="JNZ89_004285"
     CDS             complement(2764..3483)
                     /locus_tag="JNZ89_004285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector
                     phosphothreonine lyase"
                     /protein_id="HAY8937948.1"
                     /translation="MPIKKPCLKLNLDSLNVVRSEIPQMLSANERLKNNFNILYNQIR
                     QYPAYYFKVASNVPTYSDICQFFSVMYQGFQIVNHSGDVFIHACRENPQSKGDFVGDK
                     FHISIAREQVPLAFQILSGLLFSEDSPIDKWKITDMNRVSQQSRVGIGAQFTLYVKSD
                     QECSQYSALLLHKIRQFIMCLESNLLRSKIAPGEYPASDVRPEDWKYVSYRNELRSDR
                     DGSERQEQMLREEPFYRLMIE"
BASE COUNT         1066 a          720 c          639 g         1162 t
ORIGIN      
        1 aagcttgata caactggtct ggtatataca gtttctttga gtgcggttac gtccacagag
       61 gtaacggtaa aagtaacccc ttgtcgggac cactccgacc gcgcacagag gcattttcat
      121 cgctgacagg ccgcattgcc tcgcagggct ggaggaggat cggtgatatc cggacgaccg
      181 taccggctta cgccgggctt cggcggtttt actcctctgc catgtgcaac aacggagtgc
      241 cgccttacat gccgctggcg cggcatatcc tggtaacatt tttgttgata ccaccttccg
      301 gccttatcct gaccagtggg ctttcctggc atcgatgata ccgatgaacg cgcatgatat
      361 tgagccgacg atattacggg caactggaaa tactcaccct ctggatgtga cctttatcca
      421 tgaagaagat ttggccatac catggaaacc tgaacaatca tcagtttacg cccatgtaaa
      481 cccctacggg atatttgaac tcgatatgga aacaaggttg ccaatcgagg tggttgcctg
      541 aaagttggca gttacccggt cactacacct tgttggagtg aacatatcaa aaacaggtag
      601 ttacacaatt taaattacag tctcataaaa aatgattaaa tctatttatt atttcaataa
      661 acgttttttt catcttcttt gaaaattgtt ctgctatagt atccggttcc agattgttct
      721 cttttattat tctacaatac tctaatattg tttctttgtc tctatttact acagatacaa
      781 atacaccagg aataccatct ttattagttg cggacagcat ttcgaccaat cgtcttgtgg
      841 taaaactata gttttttaga atattacaaa aggcacgtat tgtttcggta tggccattat
      901 aaaatgccat aaaaagtcct gatgtaccgt tgggattttt tatccataat aattcatcta
      961 tatattcctg gtgagggggg agtattttta gtatatctcc atacgccata atggcctttg
     1021 tgtgcccatt ttgaagtgcc ataaacaacc catgctttac tttcaataat tctttaattt
     1081 gttcactact aagcattttc ttattaagca gacttccgaa catacgaata ctatctgcat
     1141 gtccattctg caatgcaaaa aataacccag gtaaatcatg gctgtctttc gcagctaata
     1201 gatataatct cttatcggaa gttaacgggg ttttaaagac tatttcccca taggctttta
     1261 ttgtgtctac atgtccgttc ataaaagaca tgcataaacc cggcacattg tttgccccta
     1321 ccgcagcaag caatgtaagt attgtttctt gactaagatt gcacatattt aatatcttac
     1381 catatacttg aataatgtct gaacatccgt tttgaagtgc tatataaaat gcaggagtac
     1441 catcagagct tctcgtggcc agaaggttca ccagtttaga ttgagaaatt tcaccatttt
     1501 tgtatttttc catcagtata aataatactt ctgtcagatt ctttgttatc gcatgatata
     1561 taactctgga attgatcaat tcatctggta aaagtttcac tgtgtttgtt agaggggaat
     1621 tatgcctatc ttcaaatatt acctgcccgg gttgctccag accataaatt ttccaataaa
     1681 aatcatcaaa aaaatcctta gcggataatt gactcagttc gaaatggcta tcacaagtaa
     1741 atacagtacg tttatgagta acagttcgat taggatcgaa aaactgaaca acccattttt
     1801 cactttcttg tacgcgcttt attttcaacc ctaacgccat ttggtggttt aatgtgcatg
     1861 ctgataatgt tctgacaaag tctccatttt ttttcatgtt ataaaaaaaa ttagtaataa
     1921 ctgttcccca ctttttattt tccacaaaat aaatataagc tggtgatttt gaaaaatctt
     1981 ccgttttttc caaacataca ttttttgcaa tagcatcagg ggtgctaaga agctgatagt
     2041 ttaccttccc atttgtttcc ataaaattca tttcccaata ggaagctagg tgacggcaaa
     2101 ctatttgtct tccatatata tcttttgcca ctccatttat atttaccttc acatttctct
     2161 tttctgaaaa ataaggtgct gttttattct taaactgaat tagttcactg gagtttgaga
     2221 ccctcataat agaacttgtt attgttctat tatctctgtt aacagacata tctgttgata
     2281 acgaattttt tgttgaaaat atactagatg aaaatgtttt atttaacggc atagaagaca
     2341 accatagaga tgttataata ctattagatt gcagttacta atagtaaaag cctccttaca
     2401 aggaggtagc ttattcagaa tgctcctata agatagcgag ctcgtcaacg atacagatga
     2461 tctgattata ttgtgcaaaa ggagaacagg aaaataggca ctggaaaaga tgaaggcctg
     2521 atgggagcat taactaatgc aaaatccgac aggttaatat cccgaaaagc aatcaaacga
     2581 ctcaaacagg agatgcacgc tgaagtggtg gacaactgtt cggatttcag atgagtagct
     2641 cagcagttta tgagccgaat gctctgtcac ggtcaggaat caggctgcat acgctgtgcc
     2701 aaatctaatc gtagttattc taaccagttt tccagctaca aggtggtgta gctggcatct
     2761 tctctactct atcatcaaac gataaaatgg ttcctctcgt aacatttgct cttgcctttc
     2821 acttccatct cgatcgcttc gtagttcatt acgatagctg acatatttcc agtcttcagg
     2881 tctaacatct gacgccggat actccccggg agcgattttg cttcttaata gattagactc
     2941 gagacacatt ataaattgtc gtattttatg aagtaataaa gcactatatt gcgagcattc
     3001 ctgatctgat tttacatata gcgtaaactg agctcctatc cccacacgag attgctgaga
     3061 aactcgattc atatcagtta tcttccattt atctatagga ctgtcctctg aaaataataa
     3121 accagacaaa atttggaatg ccagaggaac ttgctcccta gctatactaa tatgaaactt
     3181 gtccccaaca aaatccccct tactctgagg attttcacga catgcatgaa taaacacatc
     3241 tccactatgg ttcacaatct ggaatccttg gtacatgaca gaaaaaaatt gacatatatc
     3301 agagtaagtt ggcacgttcg atgctacttt gaaatagtac gctgggtatt gccgtatttg
     3361 gttgtacaat atattgaagt tatttttcaa tctttcattc gcagaaagca tctgcggtat
     3421 ttcagacctc acaacattca aagaatctaa atttagtttt agacagggct tttttatggg
     3481 catagaaaac gtcctctata aaatagatat attatcttat attgattgtt tatcatcttt
     3541 tataaaacga tacattatat gtaatgtatg taagcgtaag ggtcttc
//
LOCUS       DADMIB010000268         3528 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.275, whole genome shotgun sequence.
ACCESSION   DADMIB010000268 DADMIB010000000
VERSION     DADMIB010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.275"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(293..988)
                     /locus_tag="JNZ89_004286"
     CDS             complement(293..988)
                     /locus_tag="JNZ89_004286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HAY8937949.1"
                     /translation="MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQ
                     QRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISER
                     LQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLP
                     ESSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVH
                     GPVKAVYLIIEDC"
     gene            complement(981..2408)
                     /locus_tag="JNZ89_004287"
     CDS             complement(981..2408)
                     /locus_tag="JNZ89_004287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HAY8937950.1"
                     /translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDE
                     LGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVWFAKNKEDATRYILQVAQ
                     RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK
                     DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL
                     VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG
                     PREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG
                     SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEK
                     GITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEAR
                     DLPEADGESFRSWFKKHQAQEKKNG"
     gene            complement(2419..3138)
                     /locus_tag="JNZ89_004288"
     CDS             complement(2419..3138)
                     /locus_tag="JNZ89_004288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HAY8937951.1"
                     /translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ
                     PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAE
                     KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL
                     ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVGHLMEVRPEYLIGADVSCLLNISG
                     RLQREGQKVKVMHIAEVLMSR"
BASE COUNT          896 a          968 c          740 g          924 t
ORIGIN      
        1 gccttgtcaa aaaaatggta gatgaatacc aacaaaactc tgggcagtaa taaacaacat
       61 tctgatagag agtgcctgta taaagctgaa gtgacaatga ccgggaaggg aacccgtttt
      121 caggaatgga tgcctgtctt tttcactgta aatatcctgg cattactaat gccaggatat
      181 ttacagaaga gcagcataac catgacggaa cggggttaag tcaggttgtc cttaacgcta
      241 ttttcaacct cgtatgcctt cttcaggttt atgttcagat ctcatatctc tctcagcaat
      301 cctcaataat cagatacacc gctttcaccg ggccatgaac cccgacgact ttgataagct
      361 caatatccgc cgttgaacta gggccgctaa tgatgttaat gcaggacggc attcgttcac
      421 cggcctgcgc tttctgatgc aatttttctg cgagttgcgc tacacgcggc aggattgtgc
      481 ttttacgcag gataaaaaga gaagattccg ggagcaggct caatgaacgc ccgcgctcgg
      541 cggcggaaaa aagaaccacg cctcccgatt cggttaaacc atattcagca tacacaacac
      601 ccactttagc ctgctctgcc tgcgagatat tctcggcacc tttcgccgga tcccaaacaa
      661 cggcattgca ttcctgctgc aaacgttcac taatccccaa ttcctccagc ctcgtgtcac
      721 cgctaatcac gaccgactga tctcccagct ctttacacag acgtattgca gcttctgccg
      781 ccttcgcctc gctggtcagc tcacagcgcg tcaacataac atcgctggca aactgaataa
      841 acgcgtcaca gcgctgctgt tggttaagtt gggtaagccg ctcgttagca tagttgttaa
      901 gcggcgcatc ttctgcttgc ggttcaagtc gcagcgggcg acccagtgcc tgagcaacgt
      961 tattcaaaaa ttcgcctcga ttatccattc tttttctcct gcgcctgatg tttcttaaac
     1021 caactacgga aactctctcc gtcagcttca ggaagatcgc gtgcttccat ccagtcgcta
     1081 atcgcgccaa atttgagtgg tgttttgccg ccattgataa accagcttgc cgcatgagcg
     1141 ccggccatca tcccgacttt ccacaatcct ggatgactat tggcataagc gaacattttt
     1201 atcgcccgtt gctctgcttt tgcggtgatc cctttttcag ccatcacccg acgatgacgc
     1261 aaaatcagtt ttgacagcgg aatacgcacc ggacacacgc tgtcacaagc agtgcataaa
     1321 gagcaggcgt agggtaaatc tttaaaatct ttatagccgc caagtagcgg agaaatcacc
     1381 gcaccaattg gccctggata aatagagcca tatccatgac cgccaatatg gcgatatgcc
     1441 ggacaagtat tcatacaagc cccgcagcga atacagcgca gcacatcccg aaattcagag
     1501 gccagcacct cagaacgccc gttatcgaca ataaccagat gaaactcttc aggaccatca
     1561 acgtgccccg cttcgcgcgg tcctgtcagc caggtgttgt atcccgtcaa acgtgcacca
     1621 acggcactgc gcgccagcat ggtgatcaat acatctacct cggcaaacgt gggggcaata
     1681 cgctccattc ccatcactgc aatatgcgtt ttaggcagcg tggtacacat tcgcgcatta
     1741 ccttcattgg tcaccaggca taccgaacct gtctctgcca ccgcgaaatt acagccggta
     1801 atacctattt cagcactgag gaaatcttcg cggatttttt gccggatgaa taaggtcatc
     1861 gcttcaggcg tttccggccc ctcatagccc agacgttcgt gtagcactcg acggatctga
     1921 tggcgatctt tatgaattgc cgggaccaca acatgagatg gcggatcttg atccagctgg
     1981 agaatatatt cacccagatc ggtttcaatc acctgaatgc cagcatcctg caacacatga
     2041 ttgacaccaa tctcttcggt caccatcgat ttagatttca ccaccttccg ggcatttttg
     2101 cgttgggcaa cctgtaaaat gtagcgggta gcgtcttctt tgttttttgc aaaccagacg
     2161 tgaccgccgt tttgcgtcac tttttctgag agctggtaca gataagcgtc gagattactc
     2221 agaacatgat cacgtatctg ggcggcccga tcgcgccact cctcccagtg ccccaattca
     2281 tcgaccattt tttgccgatt tgccccaata cgctgctgcg cgtttgccac cgctttgcgc
     2341 atgatcggat cttcaatttg ctgacggatg cgagtcttaa aatctgtatt actggttttg
     2401 atcgacatct ttatatcctc agcggctcat caacacttca gcaatatgca tcactttgac
     2461 tttctgccct tcccgttgta atcgcccact gatgttcagc aggcaactca cgtcagcacc
     2521 aattaaatac tcagggcgga cttccatcag gtgcccaacc ttttctttca ccatctcgcc
     2581 ggatatttcg gccattttga ccgagaacgt gccgccaaat ccgcagcagg tatcctgttc
     2641 agcaaaggtc aacagctcca gtccacgcac atttttcagc agcgtaagtg gctcgtcctt
     2701 cactcccagc ttacgggcca ggctacaaga tgggtgatac acagctctcc cttgcaaact
     2761 ggcacctaca tcgactaccc ctaatttatt aacaataaaa gaggtgagat cctgcatacg
     2821 cgcggcaacc ttttcggcac gtgatgccca ttcaggttca tccgccagat acgtcgggta
     2881 actttttacg gcataggtgc aagagccagc cggtgaaata atgggatcgt cgttatcctc
     2941 cagtgcggcg atcagatttt tcatccctgg aatcgcttct ttgatataac cgctattgat
     3001 cgcaggctga ccgcagcatc cctgtttctc cgggaaattt acgcgacagc cgagtttttc
     3061 cagtagcagc acggagtctc gtgccattct tgatttcagg gcgtcaccaa tacaggtgac
     3121 aaagaaattg acattcacaa ctaatactcc attacttcat gcccatttat gcccgatgtt
     3181 tcccccccac cgggggatca atcatcaata aatatggcgt tcttttttaa ttggctagca
     3241 acatactacc cctcatttgt atgacaaatg ataatctttc acccaaacgt caaatgcaat
     3301 aactaatttt atttctttcg gcatcgctca cattttatgg agaaatcgac gatcattttt
     3361 ggcataagaa atccatttaa aaatggccac atcccttata cctattcaga gctacttatt
     3421 caggggttat tgagatatac actgatggtg tacaaacaaa atcaccgaca ataatcacgt
     3481 atcaagtaat agtcgggatt ttatttaatt gaagcaattt agtttgta
//
LOCUS       DADMIB010000269         3484 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.276, whole genome shotgun sequence.
ACCESSION   DADMIB010000269 DADMIB010000000
VERSION     DADMIB010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3484
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.276"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..1944
                     /locus_tag="JNZ89_004289"
                     /pseudo
     CDS             1..1944
                     /locus_tag="JNZ89_004289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
     gene            complement(1987..2460)
                     /gene="ivy"
                     /locus_tag="JNZ89_004290"
     CDS             complement(1987..2460)
                     /gene="ivy"
                     /locus_tag="JNZ89_004290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-lysozyme inhibitor"
                     /protein_id="HAY8937952.1"
                     /translation="MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTK
                     AAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEK
                     SNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK"
     gene            2614..3384
                     /gene="yafV"
                     /locus_tag="JNZ89_004291"
     CDS             2614..3384
                     /gene="yafV"
                     /locus_tag="JNZ89_004291"
                     /EC_number="3.5.1.111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutaramate amidase"
                     /protein_id="HAY8937953.1"
                     /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF
                     TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV
                     HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAI
                     YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA
                     TADAHQATRIDAELSMMALREYREKFPAWQDADEFRLR"
BASE COUNT          777 a          892 c          999 g          816 t
ORIGIN      
        1 attatcaaaa aagagtacgg ctgactggag ttctcagctt atgcccagtc tcgcgtgctg
       61 caaaaactct ccggcgtgag cgggatcctg gcgattaccg tcggcgtgcc gaactcatta
      121 ggcccgggcg agctgctgca acattacggc actgacgagc agaaagatca ctatctgccg
      181 cgtctggcgc gtggtcagga gatcccttgc tttgcactga caagcccgga agcgggttcc
      241 gatgcgggcg cgattccgga caccgggatt gtctgcatgg gcgaatggca gggccagcag
      301 gtgctgggga tgcgtctgac ttggaacaaa cgctatatta cgctggcacc gattgcgact
      361 gtgcttgggc tggcgtttaa actctccgac ccggaaaagc tgctgggtgg cgcagaagat
      421 ttaggtatta cctgtgcgct gatcccgacc accacgccgg gcgtggaaat tggtcgtcgc
      481 cacttcccgc tgaacgtacc gttccagaac ggaccgacgc gcggtaaaga tgtcttcgta
      541 ccgatcgatt acatcatcgg tgggccgaaa atggccgggc aaggctggcg gatgctggtg
      601 gagtgcctct cggtaggccg cggcatcacc ctgccttcca actcaaccgg cggcgtgaaa
      661 tcggtagcgc tggcaacggg cgcgtatgct cacattcgcc gtcagttcaa aatctctatc
      721 ggaaagatgg aagggattga agagccgctg gcgcgtattg ccggtaatgc ctacgtgatg
      781 gatgctgcgg catcgctgat tacctacggc attatgctcg gcgaaaaacc tgccgtgctg
      841 ttggctatcg ttaagtatca ctgtacccac cgcgggcagc agtcgattat tgatgcgatg
      901 gatatcactg gtggcaaagg cattatgctc gggcaaagca acttcctggc gcgtgcttac
      961 cagggcgcac cgattgccat caccgttgaa ggggctaaca ttctgacccg cagcatgatg
     1021 atcttcggac aaggagcgat tcgttgccat ccgtacgtgc tggaagagat ggaagcggcg
     1081 aagaacaatg acgtcaacgc gttcgataaa ctgttgttca aacatatcgg tcacgtcggt
     1141 agcaacaaag ttcgcagctt ctggctgggc ctgacgcgcg gtttaaccag cagcacgcca
     1201 accggcgatg ccactaaacg ctactatcag cacctgaacc gcctgagcgc caacctcgcc
     1261 ctgctttctg atgtctcgat ggcagtgctg ggcggcagcc tgaaacgtcg cgagcgcatc
     1321 tcggcccgtc tgggggatat tttaagccag ctctacctcg cctctgccgt gctgaagcgt
     1381 tatgacgacg aaggccgtaa tgaagccgac ctgccgctgg tgcactgggg cgtacaagat
     1441 gcgctgtatc aggctgaaca ggcgatggat gatttactgc aaaacttccc gaaccgcgtg
     1501 gttgccgggc tgctgaatgt ggtgatcttc ccgaccggac gtcattatct ggcaccttct
     1561 gacaagctgg atcataaagt ggcgaagatt ttacaagtgc cgaacgccac ccgttcccgc
     1621 attggtcgcg gtcagtacct gacgccgagc gagcataatc cggttggctt gctggaagag
     1681 gcgctggtgg atgtgattgc cgccgaccca attcatcagc ggatctgtaa agagctgggt
     1741 aaaaacctgc cgtttacccg tctggatgaa ctggcgcaca acgcgctggc gaagggcctg
     1801 attgataaag atgaagccgc tattctggtg aaagctgaag aaagccgtct gcgcagtatt
     1861 aacgttgatg actttgatcc ggaagagctg gcgacgaagc cggtaaagtt gccggagaaa
     1921 gtgcggaaag ttgaagccgc gtaattgaat aacggagccg aaaggctccg tttctttatc
     1981 cgctaattat ttaaaattaa agccatccgg atggttttcc aggctgccgg tcaacgccgc
     2041 gaacagcacc gttttaccat caatcgaaag cgcatcgttc acattcagcc aggtgagttt
     2101 ctcttgcgac gttttctcat caatagtcga gaacagcccc gtcatctgat tagatttctc
     2161 ggaccacatc acagcgatac gttgcgagcc acagtcatgc ggtttgcacg cgctcatcac
     2221 ctgatacgtc tcatctccca acgttacggt ttgtgcggga gtataagtac cgcctttcat
     2281 cacccaggca ggcagcttat gcccttgtac catctgatta aatgcagctt tggtggtttc
     2341 gccctttgca aggctgctaa tggttaaatc atcctgcgcc attgcactgg tggcgatgac
     2401 cagagcggcg actgtcgtta ttgccttaaa catcattcct cccgagctta tcctgcccat
     2461 gttattaacc ttctaaagcc tggcgataac acgataattt gcaaatcaga tatttccaat
     2521 atcagcattt gttatcaatt tattctgcgc taaggcaact gcctgataag gtgttaaagt
     2581 tataaaaccc ttcgcataaa ggagttgtac accgtgcctg gtttgaagat tacgcttttg
     2641 cagcaaccac tggtgtggat ggatggccct gccaacctgc gtcattttga tcgtcaactg
     2701 gaaggtatta ccgggcgcga tgtgatcgtt ctaccggaga tgtttaccag cggctttgcc
     2761 atggaagcgg cagcttcgtc gctagcacaa gatgacgtag tgaactggat gacagctaag
     2821 gcgcagcagt gcaatgcgct gatagcaggc agtgttgcat tacaaacgga gtctggttcg
     2881 gttaaccgct ttttgctggt tgagccgggc ggcacggtac atttttatga taagcgtcat
     2941 ctgttccgca tggcagatga gcatctacat tataaagcgg gcaatgcgcg agtgattgtg
     3001 gaatggcgcg gctggcgtat tttgccgttg gtgtgctacg acttacgttt tccggtgtgg
     3061 tcgcgcaatc tcaacgatta tgacctcgcc atctacgttg ccaactggcc tgctccgcgc
     3121 tctctgcact ggcaggcatt gctgacggcc cgcgcgattg agaatcaggc gtatgtggcg
     3181 ggatgcaatc gcgtcggcag cgatggcaac ggctgccatt atcgcggtga cagccgggtg
     3241 attaatccac aaggcgagat tatcgctact gccgacgcgc atcaggcaac gcgcattgat
     3301 gcggagctgt cgatgatggc attgcgggaa tatagagaaa agtttccggc atggcaggat
     3361 gcggatgagt ttaggttgcg gtgagtgggg gttgtgttta aggctggggg agagtcgggg
     3421 taagactacg aaagcccgct ctccgcaagg actgacgcca gatagtttct gtccatagct
     3481 gctt
//
LOCUS       DADMIB010000270         3435 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.277, whole genome shotgun sequence.
ACCESSION   DADMIB010000270 DADMIB010000000
VERSION     DADMIB010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3435
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.277"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..145)
                     /locus_tag="JNZ89_004292"
     CDS             complement(<1..145)
                     /locus_tag="JNZ89_004292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000649482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8937954.1"
                     /translation="MKAYWDSLTKEQQGELAGKVGSTQGYLRLVFNGYKKASFVLAKK
                     LEQC"
     gene            236..910
                     /locus_tag="JNZ89_004293"
     CDS             236..910
                     /locus_tag="JNZ89_004293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HAY8937955.1"
                     /translation="MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGA
                     TKNIGDSMARHIEKCFDLPIGWLDQEHQTTNITKKPDVSITNKQITLVPVISWVQAGA
                     WKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHG
                     DDVIALMHDTGETTFKRLIEDGTQRYLKALHPNWPEPYIKINGNCSIIGTVIFSGKPR
                     RYKIKA"
     gene            2440..2976
                     /locus_tag="JNZ89_004294"
     CDS             2440..2976
                     /locus_tag="JNZ89_004294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416862.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HAY8937956.1"
                     /translation="MSFIQTLTGKKFNYINSTIDDIYIEDIAGALSNICRFAGHLPDF
                     YSVAQHSVLCSQLVAPEFAFEALMHDATEAYCQDIPAQLKRLLPDYKRMEEKIDAVIR
                     EKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPLLEGIPATEMFKVIPLSPGHA
                     YGMFMERFNELSELRKCA"
     gene            2967..3329
                     /locus_tag="JNZ89_004295"
     CDS             2967..3329
                     /locus_tag="JNZ89_004295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HAY8937957.1"
                     /translation="MRMNVFEMEGFLRGKCVPRDLKVNETDAEYLVRKFDALEAKCAA
                     LENKVIPVSTELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGDWQWTFQVGDLE
                     NVNITHWAVMPKAPEAGA"
BASE COUNT         1083 a          722 c          725 g          905 t
ORIGIN      
        1 tgcattgctc aagtttttta gccagcacaa aactggcttt tttatagcca ttgaaaacca
       61 gccgtaagta gccttgtgtt gagccaactt ttccggccaa ctcaccctgc tgttctttgg
      121 ttaaagagtc ccaatacgct ttcatacaat atgtacctcc agtgtacaca tcacatgatt
      181 gaaatgaacc ttcaagatac ttgtacctta gcggtacaag ggttttaatt tcgttatgaa
      241 aacaatccat gacatccggc ggtctaacgc cagaaaactg agagatggtg ttggcgggaa
      301 ttcttccttt gccactatga ttgatcgcga gccaacccag accagcaggt ttatgggaga
      361 tggtgctact aaaaatatcg gtgacagcat ggcacgacac attgaaaaat gtttcgacct
      421 gcctatcgga tggctcgatc aagaacacca gacaacgaac atcacaaaaa aacctgatgt
      481 ttcaatcact aacaaacaaa taacgttagt ccctgtcata tcatgggtac aggccggagc
      541 atggaaagaa gttggctatt ctgaggttga tttgagcaca gcagaaactt atccctgccc
      601 tgtaccctgt ggcgaaatga cttatatctt gcgggtgatt ggtgattcaa tgattgatga
      661 gtaccgtccg ggagacatga tttttgttga tcctgaagtc cctgcttgcc acggtgacga
      721 cgttattgcg ttgatgcacg atacaggcga aaccaccttc aagcgattga tagaagatgg
      781 aacacagcgt tatctcaaag cattacaccc aaactggcct gagccctaca ttaagattaa
      841 cggtaattgc tctataattg gcactgtgat tttctcggga aaaccaagaa gatacaaaat
      901 aaaggcctaa tcaatattta tgaacctgct tcggcaggtt tttttatact tgacaatgta
      961 ccccatggac acacaatgta cccccatgga cacgcaatgt accaaaacga aacaacaaac
     1021 aggcaggatg cccacgaagt agccgcctgg ggcatatgaa gtccaagatg attcgttagc
     1081 aacaaaacgc ccataggacg cttcgctctt taacaatttg aatattttca gcgtcaatga
     1141 tctgtttagc tccctacaag taaatgtagc gtagcaccat gataaatcct gctagtgttt
     1201 agttaaaaat cgcgcgagag caagaacgac gtgagggcag gcaatactga tagtgttatt
     1261 gctattagtt tatcaaaaat atttagacga cccagatgaa tatttttaat acatactccc
     1321 cctaatttaa caggagtaaa tgttgatgaa taacgagaca tctatactca acaattgtat
     1381 gatatgaaca attatataac ataatgtagg aaaaataaaa atggattggc atgaccttat
     1441 atcaaaggta attatcggac ttgttacagg ctcaatcgca gcttacttaa ctgcgcgata
     1501 tgcactcggc cgttattata aagaaaaatg gtgggacaaa agaatagatt tgtatacgta
     1561 attagttgac tgtgtttatc ttctaaaaaa cacagctgac tattggtata aacatgagtt
     1621 acatcacgct tcacaattcc caacctactt tagttacaaa tcaaaagaag aaaatgaaat
     1681 ccttagcaaa tctttctcta atgagcttga aaaactcagt agaataggtg agctatcttc
     1741 attattctta acagaagagt gtggggataa aatccgttca ttcattgaaa atgaagaaaa
     1801 tctatttata caatgggtgt ttgatagtat agagttgata gatgcccaca agtcaagact
     1861 tgataaatta aaagtattac tagacgatat tatctctgaa gcaaagagag agcttaaggt
     1921 caataaaaaa cataacagcc taaagaatat aaagtggtcc ataactatgc cagaccaaaa
     1981 aaatgatgag ccaattaatt atcacgacaa tcattaaaac actttagaac ccgctgggcg
     2041 ggttctattc aaatatactt tgcacatcac aaataaaact ataacgtcct tcttcttttc
     2101 ctaatatctt atatctactt atttataagc ggcttacaga tcttcaacag ataaacctaa
     2161 tgaaggcgac aatgttctga tgaatagcca cctttttact caactgaaag cgcgttctgt
     2221 cccttgtcat taagtgccag ttcgttaagt ccaaaacctc cggaacgcgc tttcaattga
     2281 gtggggaaaa taactggcga tggcagccgc ccgttgcact aagtgcctct ggatggggca
     2341 tttactgaaa cgaaaccaaa acttttaatc gccttatggc gagggattcg tgcaaccaaa
     2401 aatcgtgcgg tgcagcgcac caattaagga gaactaacga tgagttttat ccagactctt
     2461 accggtaaga agttcaatta tatcaactcc accattgacg atatttatat cgaggatatc
     2521 gccggtgcgc tttcaaatat ctgccgcttc gcgggacact tgccggattt ttacagcgtg
     2581 gcgcagcatt ccgttctgtg cagtcaactt gtggcgccag agttcgcctt tgaagcgtta
     2641 atgcatgatg caacagaagc gtattgtcag gacatccccg cgcaactgaa acgccttctt
     2701 cctgactata aacggatgga agaaaaaata gacgccgtaa tccgtgagaa atacgggtta
     2761 cccccggtta tgagcacgcc cgtgaaatat gccgatctca tcatgctggc aaccgaacgc
     2821 cgcgatcttg ggcttgatga tggctctttc tggcctctac tagaaggtat cccagcaaca
     2881 gagatgttca aagttattcc actgtcgcca ggccatgcct acgggatgtt tatggaacgt
     2941 tttaacgaat tatcggagtt acgcaaatgc gcatgaatgt tttcgaaatg gaagggtttc
     3001 ttcgcgggaa atgtgtaccg cgagatctga aagtgaatga aacggatgct gaatacctgg
     3061 tgcgtaaatt cgatgcgctt gaagctaaat gtgcggcact ggaaaacaaa gtaataccag
     3121 tgtcaactga actgccacca gcaaatgaaa gtgttttgtt attcgatgct aacggagaag
     3181 gctggctaat tggctggcgt tctctctggt acacctgggg acaaaaagaa accggagact
     3241 ggcagtggac atttcaggtc ggggaccttg aaaacgtcaa tatcactcac tgggcagtaa
     3301 tgccaaaagc accggaggct ggagcataat gaccactttt accgacaaag aactgattaa
     3361 agaaattaaa gagcgtatca gcagccttga cgtgcgagac gatattgagc gccgtgctta
     3421 tgaaatcgca ctcct
//
LOCUS       DADMIB010000271         3415 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.278, whole genome shotgun sequence.
ACCESSION   DADMIB010000271 DADMIB010000000
VERSION     DADMIB010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3415
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.278"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(68..592)
                     /gene="sat2"
                     /locus_tag="JNZ89_004296"
     CDS             complement(68..592)
                     /gene="sat2"
                     /locus_tag="JNZ89_004296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000704156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat2"
                     /protein_id="HAY8937958.1"
                     /translation="MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSP
                     YRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAH
                     SLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNET
                     AMYWYWFSGAQDDA"
     gene            complement(687..1160)
                     /locus_tag="JNZ89_004297"
     CDS             complement(687..1160)
                     /locus_tag="JNZ89_004297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA1"
                     /protein_id="HAY8937959.1"
                     /translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEI
                     YKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
     gene            1492..2028
                     /locus_tag="JNZ89_004298"
     CDS             1492..2028
                     /locus_tag="JNZ89_004298"
                     /inference="COORDINATES: protein motif:HMM:NF024886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 2 integron integrase IntI2"
                     /protein_id="HAY8937960.1"
                     /translation="MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQ
                     TMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRL
                     PSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGK
                     GGKSRNSLLPTRLIPAIK"
     gene            2143..2469
                     /locus_tag="JNZ89_004299"
     CDS             2143..2469
                     /locus_tag="JNZ89_004299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000497519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8937961.1"
                     /translation="MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSK
                     RVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGL
                     MLLINQ"
     gene            complement(2657..2896)
                     /locus_tag="JNZ89_004300"
     CDS             complement(2657..2896)
                     /locus_tag="JNZ89_004300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1819 family protein"
                     /protein_id="HAY8937962.1"
                     /translation="MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKEN
                     VLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC"
BASE COUNT          944 a          756 c          722 g          993 t
ORIGIN      
        1 cttccctcat gatgtttaac tcctgaatta agccgcgccg cgaagcggtg tcggcttgaa
       61 tgaattgtta ggcgtcatcc tgtgctcccg agaaccagta ccagtacatc gctgtttcgt
      121 tcgagacttg aggtctagtt ttatacgtga acaggtcaat gccgccgaga gtaaagccac
      181 attttgcgta caaattgcag gcaggtacat tgttcgtttg tgtctctaat cgtatgccaa
      241 ggagctgtct gcttagtgcc cactttttcg caaattcgat gagactgtgc gcgactcctt
      301 tgcctcggtg cgtgtgcgac acaacaatgt gttcgataga ggctagatcg ttccatgttg
      361 agttgagttc aatcttcccg acaagctctt ggtcgatgaa tgcgccatag caagcagagt
      421 cttcatcaga gtcatcatcc gagatgtaat ccttccggta ggggctcaca cttctggtag
      481 atagttcaaa gccttggtcg gataggtgca catcgaacac ttcacgaaca atgaaatggt
      541 tctcagcatc caatgtttcc gccacctgct cagggatcac cgaaatcttc atatgacgcc
      601 taacgcctgg cacagcggat cgcaaacctg gcgcggcttt tggtacaaaa ggcgtgacag
      661 gtttgcgaat ccgttgctgc cacttgttaa cccttttgcc agatttggta actataattt
      721 atgttagagg cgaagtcttg ggtaaaaact ggcctaaaat tgctggggat ttcaggaaag
      781 taaacatcac cttccggctc gatgtctatt gtagatatat gtagtgtatc tacttgatcg
      841 atcaggcttt tgtatatctc cccaccacct gaaacaatga catgatccgt tattttcttt
      901 aggttggtta aagcatcttt aattgatgga aagatcaata cgttctcatt gtcagatgta
      961 aaacttgaac gtgttacgac cgcatacttt cggttgggta atgctcccat tgattcaaaa
     1021 gtcttgcgtc caaccaacag ccattggtta taggtaatag ctttaaacag gagctgttca
     1081 cctttggcac tccatggaat atcagggcca ttcccgataa ctccattctt cgatatagct
     1141 accattagtg atagtttcac aattcttcct cagaggttaa cattttatta gtaagcatgc
     1201 tcgttttgtc acccgctgat gcttaccgtt aattaatata atcacttgta ttaaatagac
     1261 tttctttaaa aatacaagac actctgttat tacaaatcgt gcatgccgtc tatcctgctt
     1321 gcacgatgca cattatctca cccaaagaac tcataacatt ttaatttatt tagcattaaa
     1381 ttaaaactct accggtaaac aagcatctct aggcgtaaaa aacaggcact tttttaaatc
     1441 ccagctagaa taggctgtat aggcagacag ttgcaagaca aggagcgttt tatgtctaac
     1501 agtccatttt taaattctat acgcacggat atgcgacaaa aaggttatgc gctgaaaact
     1561 gaaaaaactt acctgcactg gattaagcgt tttattctgt ttcacaaaaa acgtcatcct
     1621 cagaccatgg gcagtgaaga ggtcaggctg tttttatcca gcttagcaaa cagcagacat
     1681 gtagccataa acacgcagaa aatcgcttta aatgccctag cttttttgta caacaggttt
     1741 ttacaacagc cgttgggcga tattgattat atccctgcaa gcaagcctag acggctaccc
     1801 tctgttatct ctgcaaatga agtgcaacgc attttgcagg ttatggatac tcgcaaccaa
     1861 gttattttta cgctgctgta tggtgcaggt ttgcgcatta atgaatgctt gcgtttgcgg
     1921 gttaaagatt ttgattttga taatggctgc atcactgtgc atgacggtaa gggtgggaaa
     1981 agcagaaaca gcctactgcc cacgcgccta atcccagcaa taaaataact cattgagcaa
     2041 gcgcggctta ttcagcaaga cgacaactta caaggcgtag ggccatcgct gccttttgct
     2101 ttagatcaca aatacccttc tgcttatcga caagcggcgt ggatgtttgt ctttccctcc
     2161 agcacgctct gcaaccaccc gtataacggc aaattatgcc gccatcatct gcatgactcc
     2221 gttgcgcgaa aggcattgaa ggcagccgta caaaaagcag gcatcgttag caagcgtgtc
     2281 acttgtcata catttcgtca ctcgtttgct acgcatctat tacaagcggg gcgtgatatt
     2341 cgcactgtgc aagaactctt agggcataac gatgttaaga ccacgcaaat ctatacgcat
     2401 gtgttgggtc agcattttgc cggcaccacc agtcctgcgg atggactgat gctacttatc
     2461 aatcagtaaa agtagataaa tatctttatg tagccctgag tagcccctga tactttttat
     2521 ggtgaaaaag ataaacaatc atagagggga taaatatgag ccagttctac cattgttcag
     2581 ataagtttaa gcaagatact gtcaatcaca gtgaccattc atggtcatta cacttcctcc
     2641 agttgccaga caatgcctaa cataaaaacg caaaagccca aaagtcagag cttaggtgtt
     2701 ctaggcgttt tctaagcgct gaagaaatac gtcttaccgt agattgcgtg cgtttctgaa
     2761 gcacattttc cttatacatg gctttatccc aggcagcttc atcaagctct tggagtaaca
     2821 agccagtaat aatgcgacac tctcgggttt gtagcgagcc gctggtgaga tcggagttat
     2881 agcggaaagg ggtcatttgt aattatttgt gggtggagga tagttaactt attattgtag
     2941 ttggaagagg ctgctttcca aacattagca cctcgtaatg cttgttactg tatattaatt
     3001 tatgctctta gcgcatgtta atgggctatt acaatgcata atgtccacat caagataact
     3061 gtggcttaac acctgtacaa gcgaaaaaaa tcaatcacct gtccggaaat acgggatcac
     3121 tgtaaagtgt tggtgaggca gtctaggagg gggatttaat ttgggatact gatgaaagga
     3181 ttatgatcag ttggatatag gatcgtacta agctgagcgg caggttagct agattagtta
     3241 accagataag tgaaatctag ttccaaacta ttttgtcatt tttaattttc gtattagctt
     3301 acgacgctac acccagttcc catctatttt gtcactcttc cctaaataat ccttaaaaac
     3361 tccatttcca cccctcccag ttcccaacta ttttgtccgc ccacagggct gccga
//
LOCUS       DADMIB010000272         3410 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.279, whole genome shotgun sequence.
ACCESSION   DADMIB010000272 DADMIB010000000
VERSION     DADMIB010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.279"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(20..322)
                     /locus_tag="JNZ89_004301"
     CDS             complement(20..322)
                     /locus_tag="JNZ89_004301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000890114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937963.1"
                     /translation="MLEIVLSPVKAQQFTVTLDAQVCTIRLNQRTTGMYIDIIVNGEP
                     CLYGVLCLNNNRIVRYGYLPFQGDLFFTDTEGNSDPDWRGLGSRYRLYWLLPEELI"
     gene            complement(322..1032)
                     /locus_tag="JNZ89_004302"
     CDS             complement(322..1032)
                     /locus_tag="JNZ89_004302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000010340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937964.1"
                     /translation="MSFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIY
                     YARNDPAGAHQKGGKPFSPDSFVVVEVGAEASVSTVPVEQGAYTTFNKIQRSPELHVT
                     FIVEGWTAFSGSVPNLTNFSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKY
                     DYRMRSNNGPTLLTVTAVFQTVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTAS
                     VTQPSDADRRSATNRGIT"
     gene            complement(1029..3050)
                     /locus_tag="JNZ89_004303"
     CDS             complement(1029..3050)
                     /locus_tag="JNZ89_004303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HAY8937965.1"
                     /translation="MAQVLDELVLSLGIDDRDFTAGEQAVHAALNRLTTVMEGVADTF
                     SQGQKKTSESLEKTGKDADKTARRMEDAGKRASRFFSGIRSEILALAGVSLTLGGLKN
                     LVTGFARDLNRLSVESDAFGMKARNLDGWLRAARANNVDEGEMSGAFSRLANAKAAFR
                     AGRSFDPVLQDLFQVAARAGISVDLNTDSTEAIMRKLAVIFPRLTKSEQTAYGNALGF
                     SYAGQQFLGSGHALKDVDEFTSRSQVTPGRTALARKLRKELVELDQTWSGIGMTISTA
                     LMPYALKLSHWLETLGDWMQQHPEEVNRFITTFLNDVESVASLANKAAGELGGWQNVI
                     ITLIGLKVASWVRGLTKALSGPGGLLFAITALYPVVDGLLTSIVGRENKDWLDSHGFF
                     WASDGTFFFNKKEMETYQTKLDAGEKPGNITRAQSPTVWQQGMLDTQASQATGREAAF
                     GESWLQGMRATQEKLGNAMQNRQRPTKTGEALLGWLQPKLSQLEEKYNLPPGLLRSVA
                     ITESRGNQFAVSPAGAMGLFQFMPKTASEFGLRGNDAFDPEKAADAAARKLGGLIRFF
                     HGDLAKALAAYNWGEGNVQRKGLAAAPEETRNYIPRVLANLPYPGAAMAIRSLHPAPV
                     SQSTVTETTHIGTLNVTTTSDNVKGITDDARRRITNSALVSVYSSGVTG"
     gene            complement(3034..3216)
                     /locus_tag="JNZ89_004304"
     CDS             complement(3034..3216)
                     /locus_tag="JNZ89_004304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000228829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HAY8937966.1"
                     /translation="MVDYVNVPRTIATVISSGKASKAELDSVLGVQDLWDLLEIIHVD
                     AHNEQVIQENRNGAGT"
BASE COUNT          797 a          992 c          816 g          805 t
ORIGIN      
        1 attttacgtt gtctgtagct catatcagtt cctcaggtaa cagccagtag agccggtacc
       61 gggatccgag cccccgccag tcagggtcac tattcccctc cgtgtcggta aaaaacaggt
      121 ccccctgaaa cggcaggtat ccgtaccgga caatccggtt attattcaga cacagcacgc
      181 catacaggca cggttcacca ttaacaatga tatcgatata catccccgta gtacgctgat
      241 tcaggcgaat ggtgcagacc tgagcgtcca gtgtcaccgt aaactgctgg gctttaacgg
      301 gagataaaac aatttccagc atcaggtgat ccccctgttc gtggcacttc gtctgtcagc
      361 gtctgacggt tgtgtcaccg acgccgtaac tggctgcgtt ttaaccgatg cggccccttt
      421 tgctttatcg ttgtccgtgg gagacgactt atccgtactt cccactgaca cctctcctgt
      481 attcattacg gtctgaaata ccgcagtaac cgtcagtaag gtcggaccat tattacttcg
      541 cattcggtag tcatatttca caaggtcgca ggatgtccat gtcttgtccg gcgtctcaat
      601 atcgtagagt cctgccgtgg tacgcatccg ttcaagcgtt tccagcacat tcgtccgcga
      661 ggtggtggaa aaatttgtca ggttcgggac ggatccggaa aaggccgtcc acccctctac
      721 aatgaaagtc acatgcagtt ccggcgatct ctggatttta ttaaaggtgg tataagcccc
      781 ctgctccacg gggacggtgg aaacagaagc ctccgcgccc acctcaacga caacaaaaga
      841 atccggggag aaaggtttgc cacccttctg atgggcacct gccggatcat tccgtgcgta
      901 ataaataccg aatgacggtg ccagtacact attaatgagt cccaggacac cgccgccacg
      961 aactgcactc agtacgttac tttcactgag cgaaaagtta ttcagggaaa tattatcgaa
     1021 agaaaaactc atcctgttac cccgctggaa taaaccgaca caagcgccga attcgtgata
     1081 cgccgacgtg cgtcatcggt aatacccttc acattgtccg acgttgtggt gacattcagt
     1141 gtcccgatat gcgtggtttc cgttacggtg gactgcgata caggcgcagg atggagcgac
     1201 cgtatggcca ttgccgcacc cggataaggc aggttcgcca gcacccgcgg aatatagttg
     1261 cgggtctcct ccggagcagc agccagtccc ttacgctgaa catttccctc tccccagtta
     1321 tatgccgcca gagccttagc cagatcgcca tgaaaaaaac gtatcaggcc accaagtttt
     1381 ctcgcggcgg catcagcggc tttttcggga tcaaaggcat cgttccccct cagaccaaat
     1441 tcactggccg tcttcggcat gaactgaaac agtcccatcg caccagcagg tgagacggca
     1501 aactgattac cacgggattc ggtgatcgca acgctgcgca gcagtccggg cggcaggtta
     1561 tatttttcct ccagttgaga cagtttcggt tgcagccagc ctaacagggc ttccccggtc
     1621 ttcgtcggtc gctggcggtt ttgcatggca ttaccgagtt tttcctgcgt cgcacgcata
     1681 ccctgtagcc aggattcacc gaaggctgct tccctcccgg ttgcctgaga agcctgagta
     1741 tccagcatgc cctgctgcca tactgtgggt gattgtgccc gggtgatgtt gccaggcttt
     1801 tctccggcat ccagttttgt ctgatacgtc tccatctctt tcttattgaa aaagaaagtc
     1861 ccgtctgaag cccagaaaaa accatgtgaa tccagccagt ccttattttc cctgccaaca
     1921 atggatgtca gtaatccgtc aacaaccggg taaagcgccg ttatcgcaaa aagaaggcct
     1981 ccggggccac tgagggcttt tgtcagcccc cgcacccatg acgccacttt cagcccgatc
     2041 agcgtaataa tgacattctg ccagcccccc agttctccgg cagccttatt cgccagggag
     2101 gccactgact caacgtcatt cagaaatgtg gtgataaacc tgttcacttc ctccggatgt
     2161 tgctgcatcc agtcaccgag tgtctccagc cagtggctga gcttcagcgc gtacggcatc
     2221 aacgcggtgc taatcgtcat cccgatgccg gaccaggtct gatcgagctc aacaagctct
     2281 tttcgtagct tacgggccag cgctgtacgc cccggcgtaa cctgcgaacg ggaagtaaat
     2341 tcgtccacat ctttcagcgc atgaccggag ccaagaaact gctgtccggc ataactgaag
     2401 cccagcgcgt tgccgtaggc agtttgttcg gactttgtca gtcgcggaaa aataaccgcc
     2461 agcttgcgca tgatggcttc agtgctgtca gtatttaaat caacactaat gcccgccctg
     2521 gctgcaacct gaaacaaatc ctgtaacaca ggatcaaagg accttccggc tctgaaggcc
     2581 gcttttgcat ttgcaagccg ggaaaatgcc ccagacattt ccccttcatc aacattattt
     2641 gcccgcgcag cccgtaacca tccgtccaga tttctggcct tcatgccaaa agcatcggat
     2701 tccacggaca gacggttcag atcacgggca aaacctgtta ccaggttctt cagccccccc
     2761 agcgtcagac tgacacccgc aagagccaga atctcgctac ggatccctga aaaaaaacgg
     2821 gacgcccgtt tcccggcatc ttccattcga cgggccgttt tatcagcatc ttttccggtt
     2881 ttttccagtg attcactggt tttcttctgt ccctgactga atgtgtcagc gacaccttcc
     2941 atcaccgtcg tgagccggtt aagggcagca tgtactgcct gttccccggc agtaaagtcc
     3001 ctgtcatcaa tcccgaggga cagaacaagc tcatcaagta cctgcgccat ttctgttctc
     3061 ctgtatcacc tgttcgttat gggcatccac atgaattatt tccagcagat cccataagtc
     3121 ctgcacacca aggacagaat ccagttcagc ttttgaagcc ttaccggagg agataacggt
     3181 cgcaatggta cggggaacat taacgtaatc caccaccccg aacggtctgt cggggtcgag
     3241 ataacgcggg gggatatcta gctgacgacg gtagcgaaaa aatccacatg cagcttaaag
     3301 acctccgcac gcagattaag acgggtaatg atttcttcaa tatcctcttc aacaagcggt
     3361 ctccggatgc tgcgtttttt cggatcggga acaaactgca cacagtccat
//
LOCUS       DADMIB010000273         3339 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.280, whole genome shotgun sequence.
ACCESSION   DADMIB010000273 DADMIB010000000
VERSION     DADMIB010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3339
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.280"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..340
                     /gene="ldtE"
                     /locus_tag="JNZ89_004305"
     CDS             <1..340
                     /gene="ldtE"
                     /locus_tag="JNZ89_004305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="L,D-transpeptidase LdtE"
                     /protein_id="HAY8937967.1"
                     /translation="SVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTM
                     PYTLPAGFTQFKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEP
                     EQGNMLRARQ"
     gene            complement(404..640)
                     /locus_tag="JNZ89_004306"
     CDS             complement(404..640)
                     /locus_tag="JNZ89_004306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006675846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane lipoprotein"
                     /protein_id="HAY8937968.1"
                     /translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
                     SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK"
     gene            complement(951..2363)
                     /gene="pykF"
                     /locus_tag="JNZ89_004307"
     CDS             complement(951..2363)
                     /gene="pykF"
                     /locus_tag="JNZ89_004307"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010346010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase PykF"
                     /protein_id="HAY8937969.1"
                     /translation="MKKTKIVCTIGPKTESEEILAKMLDAGMNVMRLNFSHGDYAEHG
                     QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN
                     SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
                     PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII
                     SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
                     ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
                     TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP
                     DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV
                     MVSGALVPSGTTNTASVHVL"
     gene            2920..3129
                     /gene="fumD"
                     /locus_tag="JNZ89_004308"
     CDS             2920..3129
                     /gene="fumD"
                     /locus_tag="JNZ89_004308"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase FumD"
                     /protein_id="HAY8937970.1"
                     /translation="MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTA
                     LANKRIQRSELDKQAMETVINALVK"
BASE COUNT          911 a          701 c          803 g          924 t
ORIGIN      
        1 cagcgtgcgg acgggaacgc cggtgaaagt gatcaacgaa ccggtgaaat attccgtgga
       61 gcctaacggg atgcgttatg ttgaagtaca tcgaccacta tcggcagaag aacagcagaa
      121 cgttcagaca atgccataca cactgccagc aggctttacg caatttaaag acaataaggc
      181 tgtagatcag aagttagtcg ataaagcgtt gtatcgtcgg gcagggtatc cggtttcggt
      241 gagcagtgga gcaactcccg cagccagcaa tgcgccttca gtagagtcag cgcagaatgg
      301 tgaaccagag caagggaata tgttacgcgc gaggcagtag tggtaaatag cagacaaaaa
      361 aaatggcgca caatgtgcgc catttttcac ttcacaggta ctattacttg cggtatttag
      421 tagccatgtt gtccagacgc tggttagcac gagctgcgtc atctttagca gcctgaacgt
      481 cggaacgcat tgcgttcacg tcgttgctca gctggtcaac tttagcgttc agagtctgaa
      541 cgtcagaaga cagctgatcg attttagcgt tgctggagca acctgccagc agagtagaac
      601 ccaggattac cgcgcccagt accagtttag tagctttcat tattaatacc ctctagattg
      661 agttaatctc catgtagcgt tacaagtatt acacaaagtt ttttatgttg agaatatttt
      721 tttgatggga aggcacttat ttttgatcgt tcgctcaaag aagcatcgaa cgctgggttt
      781 tagataaaaa aattgagaga aaacaggatg cttccatcgg attcatctta gataaagtga
      841 gattatatag tgaaatccga tttgattttt tattgcttct ggttatcgat taaataaaaa
      901 aagcgcccat cagggcgctt cgatatacaa attaattcac aaaagcaata ttacaggacg
      961 tgaacagatg cggtgttagt agtgccgctc ggtaccagtg caccagaaac cataactaca
     1021 acgtcacctt tgtgtgccag accgctctgc agagccagtt ctttacccag acggtagaaa
     1081 tcatcagtag aagtgatctc tttaaccagc tgcggcacaa cgcctttgct cagtaccaac
     1141 tgatgagccg ttttttcgtt ggtggtcagt gccaggatgg tggcatccgg gaagtattta
     1201 cgtactgcgc gagcagattt accgccctga gtagcaacca cgatcagcgg agcatccagt
     1261 ttttcagcag tttcaacggc accacggcat accgcttcgg taatgcgcag tttacggttg
     1321 tcattgttga actcgagacg gctgttcatc acgcggtcgg tacgttcgca gatggtcgcc
     1381 atgatagaaa ccgcttccag cgggtattta ccttttgcgg attcaccaga cagcatcact
     1441 gcatcagtac cgtcgaggat ggcgtttgca acgtcaccgg cttctgcgcg agtcgggcgt
     1501 gggtttttga tcatggaatc cagcatctgg gtcgcagtga taacgacttt acgtgcacgg
     1561 atacattttt cgatcatcat cttctgggcg aagataactt cttctaccgg gatttctaca
     1621 cccaggtcgc cacgcgcaac catgatgccg tcagaggctt cgaggatttc gtcgaagttg
     1681 ttgaggcctt cctggttttc gattttggag atgatgtgga tgttttcgcc gccgtgcgct
     1741 ttcaggtgct cacggatttc gataacgtca gaacgcttac gaataaagga agcagcaaca
     1801 aagtctacgc cttgttcgca accaaagatc aggtcctgtt tgtctttttc agccagtgct
     1861 ggcagagcaa tggaaacgcc aggcaggttc acacctttgt tttcgcccag gtcaccgttg
     1921 ttcagcactt tacagataac tttgttacct tcaatggcgg taacttccat accgatcaga
     1981 ccatcgtcaa ccagtacggt gttgccaact gacaggtcag tagtgaaacc ttcatacgtt
     2041 accgcaacca tttcgctgtt gccgataaca gatttatcag tggtgaaagt aaaggtctga
     2101 ccagctttca gagaaacgtc gttaccgcct tccagtttca tggtgcggat ttccggacct
     2161 ttggtatcaa gcaggatagc ggcggtttta ccagttttgc tcatcacgtt gcgcagattc
     2221 tgaatgcgct gaccgtgttc tgcatagtca ccatgagaga agttcagacg cataacgttc
     2281 atgccagcgt ccagcatttt agctaatatc tcttcagatt cggttttcgg tccgatggtg
     2341 caaacaattt tggtcttttt catgacagtc ttagtcttta agttgagaag gatgggagaa
     2401 acttgctttc tgggcgcact gccggaaagc gaatccggta ttacgaaagt ggtggtgcct
     2461 cgctctaagg ataggtgaca tcgaaaaagc gtgcagagga atgtgtgctt gtgtctcagc
     2521 ccaacgtgag tgcctgtttt tgagtcgttg agttctacag tccaaagtgc tgaaaccatt
     2581 caagagtcaa ttggcgcgca ttatacgctg aaattaatcc aaaaggaaaa caaaaacagc
     2641 gtttcaaaaa atatacaact tgttagacaa taaattgtta tcaaagattt aacgttccag
     2701 ggaaaaggtt acgcaaaaac ttcgctgttt gcgcaacgtc tggtgccaaa gttgtcagtg
     2761 tgaggataag tgaaagttca tccggtgtat aaatatatca tcgctcaatt gctacagtta
     2821 aaataattta tcgcgttatt tgtctgattt tgtttgattt ttgtttaatt ggttagattg
     2881 atatatgctg atagttggca tgataaatag gtataaagaa tgggaaatcg gacaaaagag
     2941 gatgaactgt accgagaaat gtgcagagtt gtcggtaaag ttgtgctgga aatgcgcgat
     3001 ctggggcagg aaccaaagca tattgttatc gcaggcgtat tacgtacagc attagccaat
     3061 aaacgcattc agcgcagtga gctggataag caggcgatgg aaaccgtcat taacgcactg
     3121 gtaaaatgac cattcaggat gaggcggtaa gcttcatcct gatattcttg cttcagttgc
     3181 ggtccagtta atcattctaa ataacaactg ctgaaattat acgaattgcg gtatgtattt
     3241 taatttataa cgataatatt atttttattt tctgcaatga acgtcacaaa taattgtcgc
     3301 ttaagttaaa tttatttcaa atgataataa atatcagtt
//
LOCUS       DADMIB010000274         3319 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.281, whole genome shotgun sequence.
ACCESSION   DADMIB010000274 DADMIB010000000
VERSION     DADMIB010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3319
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.281"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..211)
                     /locus_tag="JNZ89_004309"
     CDS             complement(<1..211)
                     /locus_tag="JNZ89_004309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937971.1"
                     /translation="MIRFRLYIPPVILGFVIVPLLVWPTVIVLAVLIFTLTFLAEIIF
                     SFPLLVVCISLQELQLELMVEYALFF"
     gene            complement(214..981)
                     /locus_tag="JNZ89_004310"
     CDS             complement(214..981)
                     /locus_tag="JNZ89_004310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001182130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937972.1"
                     /translation="MQPCPAMQALIEQIYHTFRRYRVPQKFVVCCEYCLSQQEQKALR
                     STSLRAIPYSLINAWNSSPGPDPQNSDEVRYFLPRLLEFVAQGHFDNIHVVFSLRRIN
                     LANKENWRADERAILQRFACQYMTDWVSGDEAVELQYMLEMFFRADIALAPLLDAINS
                     VPGFWSTVSLACLLNRYCEDYIRDNQDDIDNVITTQINAWARNNHPLLKERARQAIEN
                     PLKQPEPMTEYQVWEDDWIIDECLCAMYDASSESLGK"
     gene            complement(984..1694)
                     /locus_tag="JNZ89_004311"
     CDS             complement(984..1694)
                     /locus_tag="JNZ89_004311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937973.1"
                     /translation="MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQA
                     LDEGEKFVGADGLEGLLRYDVTLNIGLTSSKVWPGFSLDTATISRLCACGADFGFDPY
                     ISDVPDVQCDLNTTNDVTVQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAW
                     KFHNNNSLRGFRDKQAELKLYTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNA
                     ANARFVYQPFTRDQRARG"
     gene            complement(1710..3215)
                     /locus_tag="JNZ89_004312"
                     /pseudo
     CDS             complement(1710..3215)
                     /locus_tag="JNZ89_004312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001472437.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
BASE COUNT          935 a          797 c          728 g          859 t
ORIGIN      
        1 tgaaaaaaag tgcatattca accattaact caagttgtaa ttcctgaaga gaaatacaca
       61 caaccaggag cggaaaggag aatattattt ctgccagaaa agttaacgtg aatataagta
      121 cggctaagac aataaccgtc ggccatacca ataatggcac gataacaaaa ccgagaatta
      181 cagggggaat ataaagccgg aatctaatca tttttatttt cctagtgatt cggatgatgc
      241 gtcatacatc gcgcataaac actcatcaat tatccagtca tcttcccaga cctgatattc
      301 tgtcattggt tcgggctgtt ttagcgggtt ctcaatcgct tgccgcgctc tttctttcag
      361 taaaggatga ttatttctag cccaggcatt gatttgggtg gtaatgacgt tatcgatatc
      421 gtcctggtta tctctgatat aatcctcaca atatctgttc aataaacagg caagagaaac
      481 ggtcgaccaa aagccgggaa ctgaattaat ggcatccagc aatggcgcaa gagcgatatc
      541 ggcacggaaa aacatttcca gcatatactg taattcgaca gcttcatcgc cggataccca
      601 atcagtcata tactggcagg caaatcgctg taaaattgcc cgttcatccg cacgccagtt
      661 ttctttgttg gcaaggttga tacggcgcag agaaaaaact acgtgaatat tgtcaaaatg
      721 cccctgtgca acaaattcca gtaaacgcgg cagaaaatag cggacctcat cgctattttg
      781 cggatcaggc cctgggctac tattccaggc attgattaag gaatacggga tcgctcgtaa
      841 cgatgtactc cgtaatgcct tttgttcctg ctgactcagg caatattcac aacaaaccac
      901 aaatttctgc ggcacccgat aacgacgaaa ggtgtgataa atctgctcaa ttaatgcctg
      961 catggcgggg cagggttgca tagttacccc ctcgcccgct gatcgcgtgt aaacggttga
     1021 tagacaaaac gagcattcgc cgcgttcagg cgaataaggg cgctacgcga aagggaaaag
     1081 ctggggcgaa tgcaactatt gcagtctcga cagctttcct ctgcgcaatt ttccactgag
     1141 taatgacgcg tgtagagttt cagttcggcc tgcttatcgc gaaatccgcg taaactgtta
     1201 ttgttatgaa atttccaggc atctttaaag acctgaaaga tatagacatc ctcaatccag
     1261 gagtcacatt ttttaagcgg gcgctttgct attatcaccc gctcatccgg atttagcatc
     1321 gccgtaaatt gtacggtgac gtcatttgtc gtgttcaggt cacattgaac atctggtaca
     1381 tcactgatat aggggtcaaa tccaaaatca gcaccacagg cacaaagacg gctaatggtg
     1441 gcggtatcga gggaaaatcc cggccatact ttgctggagg ttaagccaat atttaatgtg
     1501 acatcatatc gaagcaatcc ctcaagaccg tcagcaccga cgaacttttc cccttcatcc
     1561 agggcctggt taataagttg ctgaacaatg ccttcatccc agtatgccga tttgcagttg
     1621 gcaatcgtaa tatccacgcc tgtgaaggga tcagtaccgg caaggcttgc aaataatgta
     1681 ttaactaatt ccatttttat tatccagctt taaggtagcg tcttatacat cgggacataa
     1741 cctacatctt ccaccaaact ctgtccctgc ggcgttaaaa accactccaa caatttttgt
     1801 gtctctgacg tcgtattttc ccgcgttacc ataaaggcat cgatgatata gggatatttg
     1861 ccgttgcgaa tgttttcggc agtcggtgca ataccgttaa tcgctagcag ttttatattt
     1921 ttatcggcgt tcatttgtgt tgcgtaataa cggaaggtgt aacctattgc gttgtttgta
     1981 ttacggtatt cggcaacgac tttaatcatt ccctccatca tacttgccac ttctgtttcc
     2041 tgcggcgaga tcatgcggac atttttcatg acctgggatt gcatcaccgt ctggctacca
     2101 gagtcttccg ggcgttgcta ggtctggatc tcctgatcgt taccgccaac agtacgccag
     2161 ttggtaattg caccactgaa gatgtcacgc acctgttgtt cagtcaggga attaaccgga
     2221 ttatccgcat tgacgatgaa aacaaacgct tcacgggcaa aaggcgtgta cagcaaagta
     2281 atgcccgatt cctcagcgcg ttttttctgc ccaccggaag gttgcgccac aaaaataata
     2341 tcagcatcac ctttaacaat cctgttatac gcatcggggg tacgagagct ctccagatat
     2401 tccctggtgt gaaaatcttc cggtataacg ctcaaagcat aaaatgcaga ggcataaatt
     2461 gggtacgccg ccgtagcacc atcgagtcgc ggccagtttt gcgtaaactg aatttgcggt
     2521 ttaccacgca gtggtgtcag ttgattattg agtttatcgg gtcgccaggc ccaggtatca
     2581 atattttcgc gcacaccgac gccgggattg agctgtttat ataaataacc ctgataacca
     2641 gcgacaaaac caagcatgag aaggataaac aggagggaat tacggcaacg tagcccggat
     2701 gtaccggtta aaggatgtct ggttggccgg ccgtacccca gcgaaaaact gatatgcgcg
     2761 ccaacgggta taatgactat ccaccagtac tcacctccga ctactgagac taacaaaacg
     2821 cccagccagg ggagcataag atcagccaac caacccgatc ccatctggtg aaattgataa
     2881 tctgccagat gcagcgcgat tatccagcca accaggatta ataaaccggg tactaaaaaa
     2941 agacattgtc gccagacggc tatttctctt ttttctggtg cactatcgcc tgcccatact
     3001 cgccccgaga aaaatagcat taatgcgccc agcgccagca taaaaatgtt gagcagaagg
     3061 taacttgttg gcgtgataag gatattacaa acttcaataa taccggcaag tccgacaccc
     3121 agcatagcaa caaccgccgc caaaaattgc gtcagtatgg ggatgccgaa aaaagtcatt
     3181 accagcgagg acaaaatcca ttttctgttt tgcattattc tttccattct ttttgaatgg
     3241 tgaaattata ctccccgagt ccccttgccc cttctggaca cttttccgaa atgatggcgg
     3301 aaaaaaacgg gaccctttg
//
LOCUS       DADMIB010000275         3315 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.282, whole genome shotgun sequence.
ACCESSION   DADMIB010000275 DADMIB010000000
VERSION     DADMIB010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.282"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..268
                     /locus_tag="JNZ89_004313"
     CDS             <1..268
                     /locus_tag="JNZ89_004313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001340615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HAY8937974.1"
                     /translation="LYTPSRILRMAELTRLLGISRSTIYVKINPASKYHDPTFPKPIR
                     LGSASVGWRASAIDEWLMLHTAPAWSEPENKLKELNDDDKTITP"
     gene            240..1769
                     /locus_tag="JNZ89_004314"
     CDS             240..1769
                     /locus_tag="JNZ89_004314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016231106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3987 domain-containing protein"
                     /protein_id="HAY8937975.1"
                     /translation="MMTTKLSLPELDTTKLPDRCQALLDEMHEETGIRREILLSVMLT
                     VMAASVQDTHEVELSGGQRTSLQIFMCLSSASGSGKTSACAKLIAPVHETEEELHQAY
                     IDDKKNYDRMMEMWTTDKKILERRYKKEIERSPENAAAARAALEKCIANKPEPPVQQV
                     LIVNDATPEGIALKLSQSPSLLLLSDEGGTILDKRFERKSALYNTLWSGQPVNVERAS
                     RPGFRLNDVRLTILILTQPVIFNKFFTLTGDQIRGNGFLARLLFCEPGAIKIMTTEPH
                     TATPVVTQQCASCFRKKSFGSQIRDSLRASRERRAKSKERICMTLSNAASRALERFHK
                     ENMDTVRQNPHMGTFEDIIVRKREQVVRIAALLELEKDPDSTVITLESTNSAIYLIEF
                     YFKHLIYKLESLREISPAEKLDKWLQKRIITTAGYIFQKSYILQYAPYALRKKCVLDE
                     ALDILAEQRKIRIDDNLVVYIGNTITPSELAKKLNIPAFDAGVFICDHQNILKYHRNR
                     L"
     gene            complement(1939..3156)
                     /locus_tag="JNZ89_004315"
     CDS             complement(1939..3156)
                     /locus_tag="JNZ89_004315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000279856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY8937976.1"
                     /translation="MAVLTDTKARHIKPDDKPLPHGGITGLTLHPSSVKGRGKWVFRY
                     VSPVTQKRRNAGLGTYPEVSIAEAARTARIMREQLAAGDDPLEIKKAESEKVVIPTFA
                     DAARRVHAELSPGWENPKHVRQWLSTLENYAFPQLGAKTLDSITAADVAETLRPVWLT
                     LSETASRVKQRIHVVMQWGWAHGFCVANPVDVVDHLLPQQTRGRDEHQPAMPWRQLPL
                     FVATSVYSDEPYNVTRALLLMVILTATRSGEARGMRWAEIDFHKRVWTIPAERMKARL
                     QHRVPLSRQAIYILENIRGLHDELVFPSPRKQQILSDMVLTSFLRKKKAVSDIPGRVA
                     TAHGFRSTFRDWCSEQGYSRDLAERALAHTLKNKVEAAYHRTDLLEQRVPMMQAWADY
                     VMSQLAKNTKEFA"
BASE COUNT          986 a          790 c          689 g          850 t
ORIGIN      
        1 gctttacacg ccttcacgca tcctgcgtat ggctgaactt acccgactgc tgggtatatc
       61 aagatctact atttacgtga aaataaatcc ggcctcgaaa taccacgacc ctacctttcc
      121 caaaccaata aggcttggta gtgcatccgt aggctggcgg gcatctgcca tcgatgagtg
      181 gctgatgtta catacggcac cagcctggtc tgaacctgaa aacaaactaa aggaacttaa
      241 tgatgacgac aaaactatca ctccctgaac ttgacacaac taaactgcct gacaggtgcc
      301 aggcattact tgatgaaatg catgaagaaa caggaatacg ccgtgaaata cttctgtctg
      361 ttatgctgac ggtcatggct gcctcggtcc aggatacgca tgaagttgaa ctttccggag
      421 ggcaacgtac cagccttcag atatttatgt gtctttcatc agcatcaggc agtggaaaaa
      481 cctctgcctg cgcaaaatta atcgctcctg ttcatgaaac agaagaagaa ctacatcagg
      541 catatatcga cgataaaaaa aactatgacc gaatgatgga aatgtggaca acagataaaa
      601 aaatcctgga gcggagatat aaaaaggaaa ttgaaagatc cccggaaaat gctgctgctg
      661 cacgagcagc acttgaaaag tgtatagcaa ataaacccga acctcccgta caacaggttc
      721 tcatcgtgaa tgacgcgaca ccagaaggga tagctttgaa actcagccag tcaccctctc
      781 ttctgttgct gtctgatgaa ggaggtacta ttctggataa gcgtttcgaa cgcaaatcgg
      841 cactgtacaa cacattatgg agtgggcaac cagtcaacgt tgaacgggca tccagacccg
      901 ggttccggct gaatgatgtc cgtctcacta tacttatact gactcaaccg gtaatattta
      961 ataagttttt tactctcact ggcgatcaga tccggggcaa tggctttctg gcccggttgc
     1021 tattttgcga acccggagca attaaaataa tgacgacaga accgcatact gccactcctg
     1081 ttgtgacgca acaatgtgca agctgttttc gtaagaaaag ttttggcagt cagatcagag
     1141 actctctgag agcatccaga gaaagacgtg caaaaagtaa agagcgcatc tgcatgacat
     1201 tatcaaatgc agcatcccgc gcactggagc gctttcacaa agaaaatatg gatactgtca
     1261 gacagaatcc tcatatgggt acatttgaag acattattgt cagaaaaaga gagcaggttg
     1321 tcaggatagc agcacttctg gaactggaga aagatccaga ctcgacagta ataacgctgg
     1381 aaagtactaa tagcgccatt tatctcattg aattttattt caagcatctt atatataaac
     1441 ttgaatccct tcgggaaata tccccggctg agaaacttga taaatggctt cagaaaagaa
     1501 ttatcacaac agcaggttac atattccaga aaagttatat tttacaatat gccccatatg
     1561 ctctcaggaa aaaatgtgtt ctggatgaag cacttgacat actggcggaa caaaggaaaa
     1621 taaggattga tgataacctg gttgtttata taggaaacac gattacacca tccgaactgg
     1681 caaaaaaact aaatattcct gcattcgatg ccggagtttt catttgtgat catcaaaaca
     1741 tactgaagta tcaccgaaac agactataga tactatcgga caaaaaataa attatcacaa
     1801 gtgtattatt cgttataata atgaataatc gttatctgag tgcaatgcca ggttttcatt
     1861 acgaactggc attgcattta tttttcaaaa aagaaagcag taaccatttg gctactctga
     1921 gtatgccagt ccatgaaact aagcgaattc cttagtgttt ttagcaagtt gagacatcac
     1981 ataatccgcc catgcctgca tcatcggtac acgctgctcc agtagatcag tacgatgata
     2041 tgccgcctca accttatttt tcagcgtatg agcgagcgcc ctttccgcca gatcccgcga
     2101 atacccctgt tcactacacc agtccctgaa tgttgagcga aaaccatgtg ccgtggcaac
     2161 tcgccccgga atgtcactga cggctttctt tttacgcaga aaacttgtca acaccatatc
     2221 ggaaaggatc tgctgctttc tgggtgaagg gaacaccagt tcatcatgca ggccacgtat
     2281 attttccaga atgtaaatag cctgccggga taaaggaaca cgatgctgta gcctagcttt
     2341 cattctttct gcaggtatag tccatacccg cttatgaaaa tcaatttcag cccagcgcat
     2401 tcccctggct tcgcccgagc gagttgctgt aagtatcacc attaataaca gtgcgcgggt
     2461 aacattataa ggttcatcac tatacacact ggtcgccaca aaaagcggta actgcctcca
     2521 gggcattgcg ggttggtgtt catcacgtcc tcttgtctgc tgaggaagca aatggtcaac
     2581 cacatcaaca ggatttgcca cacaaaaacc gtgcgcccat ccccactgca taacaacatg
     2641 aatgcgctgt ttaacccggc ttgccgtttc tgacaaggtt aaccagactg gacgcagtgt
     2701 ttctgccacg tccgcagccg taatcgaatc cagcgttttt gctcccagtt gaggaaacgc
     2761 gtaattctca agcgtcgata accactgcct tacatgcttt ggattctccc atccaggaga
     2821 cagttctgca tgtacacgcc tggctgcatc ggcaaatgtt gggataacga ctttctcaga
     2881 ttcagccttt ttaatctcca gaggatcatc acctgcagca agttgctctc gcattatccg
     2941 ggcagtacgt gcagcttcag caatactgac ctctgggtaa gttcccaatc cagcattacg
     3001 tcttttttgt gtcaccggac ttacataacg aaaaacccat ttcccccgcc cctttactga
     3061 agaaggatga agggtcagtc cggtaattcc cccatggggc aatggtttgt catcaggttt
     3121 gatatgtctt gctttcgtat ccgtcaatac tgccatacgc taattcccgt cactctggta
     3181 tgccatccag tatgccatta gtccctcgct tcactaagaa tacattagat aacatcggac
     3241 aacaaaaagt gtaatacatt gtttataaag aaattatata acacccctgg attaagtcag
     3301 atttatttca ggcgg
//
LOCUS       DADMIB010000276         3227 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.283, whole genome shotgun sequence.
ACCESSION   DADMIB010000276 DADMIB010000000
VERSION     DADMIB010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3227
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.283"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..1010)
                     /locus_tag="JNZ89_004316"
     CDS             complement(<1..1010)
                     /locus_tag="JNZ89_004316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
                     /protein_id="HAY8937977.1"
                     /translation="MKIGTVAGTNDSTTTIATNDMVQEHVTNFTKELFGYIANGIGDD
                     ISSIARTMLGEVVEKIDDWQIERFQQSIQDDKISFTIQTDHSEKYSMLSGMRAHILRR
                     DNNYQFIVTINSKNYGCSLDNTDVNWCSVVYLLNNMTVNDNANDVAVTESYKPIWNWK
                     ISQYNVFDIKFETIINPQFADRIYFSNCSPVDPTSTRPTYFGDTDGSVGAVLYALFAT
                     GYLGIMTEGENFLCRLLTIEDEVLNVLLRENFNEQLDTNINTIISNLNRRDNVLESLQ
                     PYLVINKDAVTPCTFLGDQTGDRFSNICGDQFIIDLLKRIMSINENVHVLAGNHETNC
                     NG"
     gene            complement(1272..2862)
                     /locus_tag="JNZ89_004317"
                     /pseudo
     CDS             complement(1272..2862)
                     /locus_tag="JNZ89_004317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312389.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4049 domain-containing protein"
BASE COUNT         1034 a          592 c          507 g         1094 t
ORIGIN      
        1 ttaccattgc aattcgtttc atgatttcca gctaatacat gaacattttc attgatactc
       61 attatgcgtt ttaacaaatc gatgataaat tgatcgccac agatattact aaatcgatcg
      121 ccggtttggt cgcccagaaa cgtacatggc gtgactgcgt ctttattaat aactaaataa
      181 ggctgaagac tttctaaaac attatctctt ctgttcaggt tactgattat tgtattaata
      241 ttagtgtcaa gttgctcatt aaagttttcc cttagcaata cgttgagaac ttcatcttct
      301 atagtaagca accggcaaag gaaattttct ccttcagtca tgattcccaa atatcccgta
      361 gcaaaaagcg cgtacaaaac tgcaccaact gaaccatcgg tatccccaaa ataggtcggc
      421 ctggtacttg tgggatcaac aggtgaacaa ttggagaaat agattctgtc agcgaactgg
      481 gggtttataa ttgtttcgaa tttaatatca aatacattgt attgcgatat tttccagttc
      541 cagatgggtt tgtacgactc agtaactgca acatcattag cattatcatt tactgtcata
      601 ttattaagta aataaacaac actgcaccaa ttaacatcag tattatcaag agagcaaccg
      661 taatttttac tattaattgt cacaataaac tgataattat tatccctacg tagaatatga
      721 gcacgcatgc ccgatagcat actatatttt tctgaatgat ccgtttgtat ggtaaatgaa
      781 attttgtcat cttgaataga ttgttggaac cgttctattt gccaatcatc tattttttcc
      841 acaacctcac cgagcattgt cctggcaata cttgatatat catcacctat accatttgca
      901 atatacccaa acagttcttt agtgaagttg gtaacatgct cttgcaccat atcatttgtt
      961 gcgattgtcg ttgtactgtc gttagtgcct gccacagttc caattttcat cttttacctc
     1021 atattattca ccgcgaggaa tacatagtta acattttatc ttatgacata cacctcatgt
     1081 tcgatggaaa aataattata ttttgcacaa atcattcagc cttaaagcat aatatgaaat
     1141 ttcttatttc atagcagaga aagtccctaa agattgtaga ggcgtcatca gaacatgtct
     1201 ctacaatcga ttaagaaaac ctatgaaata ctggcaggat taaaaagata taccacagca
     1261 ctcatggagt tttaatgtgg ttgaaaacaa ctaagccctg ggacaccttt tttatcacca
     1321 cgttcgttag gagctatctt ccaggaattt agccccatgg tataattatc aattttttga
     1381 tgctgatcta cccctaatcc ataatggcca tatttctgtt tagttttttt gagcgtctgt
     1441 ccacatttga agatatcttc aggttttggt ctgaaagcag tagtgttatt aaaataattg
     1501 tcatatacag gtgtggatgc tatagcattg cttctaatta gatggataaa acgatcatcc
     1561 atgtgttgtt tatgtttttt attaaatata tttgctaatt cctcaggatc aattgggtct
     1621 ttcatctgat taaatggaac ctgcaaagca cctagacaat aacattcatt ttcttcattt
     1681 cttattattc cgtgatgact gcttaaaact ttcgtttctg agtcataatt acaaacatcg
     1741 agcgttttaa ttaagttata cgtatcaccg gcagagagtt tatgatttgc tagtcgtgca
     1801 gtatagttac cattgaaatt gatttcataa tttccagcca gaacgacgtc atttttattt
     1861 atacgactat ctttattact ctccatattc cgcatagaat ttagcaaagt aaggatatat
     1921 ttatcaccaa aaatagtact gaatctatcg cctgtatgat ccccaagaaa gatacaaggg
     1981 gtaatcgcat cgccttttaa aaaaacatgt tgatgcaact tattcaagat catgtctctc
     2041 gtatctaata aagtaaagag tttttccaat tttttatttt catatgcgaa tgaagccatg
     2101 tcttcgtgtt ttaataattc acataataaa ctccacccct tttccctgat acctatatgt
     2161 cctgaaacga gcaatgcata aagtacagcg ccaactcttc catctgtatc gccaaaataa
     2221 gccgtgttgg gattttgtgg gttaatcaca ccacactgtt tataaaaatc tatttttgaa
     2281 aacacagaat taacatagct agcaaactta tccttaggaa acgtctcttt agagacatcc
     2341 caacgctagt cagctttaaa attaccgcta agaagagtaa agaaattttc aggtatgata
     2401 gaaaggccat taactttata aattatgtct gatttatctc cggagaaact aataaaataa
     2461 taaccatcct tacactcaat cgtaacggta atgggagacg acaattttat tacatggtta
     2521 ttgtctggta taattgtaaa gataaacgtg tcagtagtat tatcggcgaa actattatat
     2581 tcttgaatat ctatagatgg ctcattattg taaaaccata tttttttcta tctgagaact
     2641 atattcattt accttccagc gaccatgttg caggaaatag atgatatgca ggcctaaatc
     2701 gttatctatt tgcgaatgtt tatccagctt atcaatttca actatctttg aacgatgttt
     2761 tttatcaacc ttgccatggt gttgatgatt gttaacttga tctgaatgct tatcttgatg
     2821 gcttgaagag atgtgcttaa atatattgtg aaatactttc ataaataacc cgcaatattt
     2881 ataacttgtt agtaacaaaa taaacgatac atgtctgaaa gacatattta cgacgataca
     2941 aagtaataat acttatatat ccgatgattt taagcaccga gactatccgg tcttttacta
     3001 aataatggaa aacaatccat ccctggaaga taattgaaaa aaacaacaga ataagaatta
     3061 atcttaggat aaacatttat ttatcatggc cttttgaacg ctgaaaagta gcgctctgta
     3121 aagtaaaccc cgctatagtt atgctatgca tttgtcttta atgatatctc gtcattgtat
     3181 taacaggctg aaattatcat taatgcacat ttcaatatta gcaggga
//
LOCUS       DADMIB010000277         3224 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.284, whole genome shotgun sequence.
ACCESSION   DADMIB010000277 DADMIB010000000
VERSION     DADMIB010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3224
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.284"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..907
                     /locus_tag="JNZ89_004318"
     CDS             <1..907
                     /locus_tag="JNZ89_004318"
                     /EC_number="2.7.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pseudouridine kinase"
                     /protein_id="HAY8937978.1"
                     /translation="ANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNK
                     AWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDM
                     NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCV
                     KVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVY
                     YSDISGENSWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALS
                     CEYTNNPDLSIANVISLVENAERLN"
     gene            874..1833
                     /locus_tag="JNZ89_004319"
     CDS             874..1833
                     /locus_tag="JNZ89_004319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HAY8937979.1"
                     /translation="MVSGERRTSELKISPELLQISPEVQDALKNKKPVVALESTIISH
                     GMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEIELLGREGHNVTKVS
                     RRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQEL
                     ANTNVTVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDS
                     ASEIARAMAVKWQSGLNGGLVVANPIPEQFAMPEESINAAIDQAVAEAEEQGVIGKES
                     TLFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLAG"
     gene            1927..3177
                     /locus_tag="JNZ89_004320"
     CDS             1927..3177
                     /locus_tag="JNZ89_004320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HAY8937980.1"
                     /translation="MDIMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGG
                     IMLYFPPGKWAVEQAALGVHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVL
                     PAIIFVTALISLLYYIGVMGLLIRILGSIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFAR
                     ILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINEFVA
                     YLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
BASE COUNT          771 a          725 c          872 g          856 t
ORIGIN      
        1 ggcgaatatt gatgtcgccg gatattcaca tgaatcatta aattatgcgg attcaaatcc
       61 aggtaaaata aaatttacgc ctggtggagt cgggcgcaat attgcacaaa acctggcgtt
      121 gctggggaac aaagcctggc tactgagcgc cgtaggcagt gacttttatg gtcaatcgct
      181 gctaacgcaa accaatcaat ctggcgttta tgtcgataaa tgcctgattg tgccgggaga
      241 aaatacgtct agttatttat cattactcga taataccggt gaaatgctgg ttgctataaa
      301 tgacatgaat attagcaacg ctattacagc tgaatatctc gcacagcacc gtgaatttat
      361 tcagagggca aaggtcattg tcgcggactg taatatcagt gaagaggcac tggcatggat
      421 tctggataat gccgccaacg tacccgtatt tgtcgatccg gtttccgcat ggaaatgtgt
      481 caaagtgcgc gaccgtctaa atcagatcca cactctgaag ccaaaccgcc ttgaagcgga
      541 aaccctgagt gggattgcgc tgtcagggcg tgaagatgtg gcaaaagttg ctgcctggtt
      601 ccatcaacat ggcctgaacc gactggtatt gagcatgggc ggcgacggcg tttattacag
      661 cgatatcagc ggtgaaaata gctggtctgc gccgatcaaa accaatgtta ttaatgttac
      721 cggagcgggc gatgccatga tggcgggact tgcttcgtgt tgggtagacg gaatgccgtt
      781 tgccgaatct gttcgtttcg cacagggatg ttcgtcaatg gcgctctcct gtgaatacac
      841 caataacccc gatttatcga ttgccaacgt tatatcgtta gtggagaacg cagaacgtct
      901 gaattaaaaa tttcccctga attattacaa atttccccgg aagtgcagga cgctttaaaa
      961 aacaaaaaac cggttgtggc gctggaatcg accattattt ctcacgggat gccgttccca
     1021 caaaatgccc agaccgcaat tgaagtagaa gaaactattc gtaaacaggg cgctgtacct
     1081 gccactatcg ccattattgg cggcgtgatg aaagtgggtt taagcaaaga agaaattgaa
     1141 ttactgggtc gtgaagggca taacgtgacc aaagttagtc gtcgcgattt accttttgtt
     1201 gttgccgccg gaaaaaatgg cgcaaccact gtggcttcaa cgatgattat tgcggcgctt
     1261 gccggaatta aagtatttgc caccggggga attggtggtg tgcatcgcgg ggcggaacat
     1321 accttcgata tttctgccga tttgcaagaa ctggcaaata ctaatgtcac cgttgtttgt
     1381 gccggggcga aatctattct cgatttagga ttaaccactg agtatttaga aaccttcggt
     1441 gtgccgttaa ttggctatca gactaaagcg ctgcctgcgt ttttctgccg taccagctcg
     1501 tttgacgtca gtattcgtct cgacagcgcc agtgaaattg cccgtgcaat ggcggtgaaa
     1561 tggcaaagcg ggctgaacgg tggcctcgtg gtagcgaacc cgatcccgga acagtttgcg
     1621 atgccggagg aatctatcaa tgcagccata gatcaagccg tcgccgaagc cgaagagcag
     1681 ggcgttattg gtaaagaaag tacactgttc ctgctggcgc gcgttgctga gctgaccggc
     1741 ggtgacagcc tgaaatccaa tatccagctg gtattcaaca acgccattct ggcgagtgaa
     1801 attgccaaag aataccagcg tctcgcgggt taatttccga cgggcagaaa gccgtcgccc
     1861 gtactcatca agcataccaa aacctggcgc tgacgccggg tttactggca tgaagggaaa
     1921 atcattatgg atataatgag aagtgttgtg gggatggtgg tgttactggc aatagcattt
     1981 ctgttgtcag tgaataaaaa gagcatcagt ttgcgcacgg ttggagccgc actgctgctg
     2041 caaatcgcta ttggtggcat catgctctac ttcccaccgg gaaagtgggc agtagaacag
     2101 gcggcattag gcgttcataa agtgatgtct tacagtgatg ccggtagcgc cttcattttt
     2161 ggttcgctgg ttgggccgaa aatggatgtc ctgtttgacg gtgcgggttt tatcttcgcc
     2221 tttcgcgtac ttccggcgat tattttcgtt actgcgctca tcagtctgct gtactacatt
     2281 ggcgtgatgg ggctgctgat tcgcatcctt ggcagcattt tccagaaagc tcttaacatc
     2341 agcaaaatcg aatcttttgt cgcagtcaca actattttcc tcgggcaaaa tgagatcccg
     2401 gcgatcgtta aaccgtttat cgatcgcatg aatcgcaacg agttgtttac cgcaatttgt
     2461 agcgggatgg cgtccattgc tggttcgatg atgattggtt atgccggaat gggcgtacca
     2521 attgactacc tgttagcggc atcgctgatg gcgatcccag gtggtatttt gtttgcacgt
     2581 attcttagcc cggccaccga gccttcgcag gtcacatttg aaaatctgtc gttcagcgaa
     2641 acgccgccaa aaagctttat cgaagcggcg gcgagcggtg cgatgaccgg gctgaaaatc
     2701 gccgctggtg tagcgacggt ggtaatggca tttgtcgcaa ttattgcgct gatcaacggc
     2761 attatcggcg gaattggtgg ctggtttggt ttcgccaatg cctctctgga aagtattttt
     2821 ggctatgtgc tggcaccgct ggcgtggatc atgggtgtgg actggagtga tgccaatctt
     2881 gcgggtagcc tgattgggca gaaactggcg attaacgaat tcgtcgctta cctgagtttc
     2941 tccccatacc tgcaaacggg cggcacgctg gaagtgaaaa ccattgcgat tatctccttt
     3001 gcgctttgtg gttttgctaa ctttggttct atcggtgttg tcgttggcgc attttcggct
     3061 atttcgccaa aacgcgcgcc ggaaatcgcc cagcttggtt tacgggcgct ggcagcagca
     3121 acgctttcca acctgatgag tgcgactatt gccgggttct ttattggttt agcttgagtt
     3181 tcattgccgg atgtacgcgc ttattaagcg ttgcatccgg caat
//
LOCUS       DADMIB010000278         3195 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.286, whole genome shotgun sequence.
ACCESSION   DADMIB010000278 DADMIB010000000
VERSION     DADMIB010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.286"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            199..939
                     /locus_tag="JNZ89_004321"
     CDS             199..939
                     /locus_tag="JNZ89_004321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HAY8937981.1"
                     /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ
                     LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG
                     ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN
                     GRYVVSKPLSHEVVQPQLASNYTLPEAK"
     gene            complement(910..1677)
                     /locus_tag="JNZ89_004322"
     CDS             complement(910..1677)
                     /locus_tag="JNZ89_004322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HAY8937982.1"
                     /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA
                     SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT
                     PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV"
     gene            complement(1883..2461)
                     /gene="lpcA"
                     /locus_tag="JNZ89_004323"
     CDS             complement(1883..2461)
                     /gene="lpcA"
                     /locus_tag="JNZ89_004323"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HAY8937983.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS
                     RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            2701..>3195
                     /locus_tag="JNZ89_004324"
     CDS             2701..>3195
                     /locus_tag="JNZ89_004324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HAY8937984.1"
                     /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS
                     AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     EHRFF"
BASE COUNT          765 a          810 c          819 g          801 t
ORIGIN      
        1 atcttaggaa ataaatgata catgcgcttt tcggactatt gaaaactgcc cctgtgctaa
       61 atttgtaaac cctgcgccga caggcttgcg taaaactctt ttggtgataa tgtgagcctt
      121 ccaaatccag actattccga tttgggatcc attttgccgt cctggcgtgt gtaaccgttt
      181 tatcaaggaa taagcagtat gcgtaaaatc gcattaattc ttgcgatgtt gttgatcccg
      241 tgcgtttcgt ttgccggttt gctgggcagc agtagctcga ccacgccagt gagcaaagag
      301 tataagcagc agttgatggg atcccctgtc tacatccaga tcttcaagga agaacgtacg
      361 ctcgatctct acgtcaaaat gggcgagcaa tatcagctgc tcgacagtta taaaatctgt
      421 aaatattccg gcggcttagg gccaaaacag cgtcagggcg atttcaaaag cccggaaggg
      481 ttttatagcg tccagcgtaa tcagttaaaa ccagacagcc gttactacaa agcgattaat
      541 attggtttcc ccaatgccta tgaccgtgcg catggttatg aagggaaata cctgatgatc
      601 cacggcgatt gtgtttccat cggctgctac gcaatgacca atcagggtat tgatgagatc
      661 ttccagttcg ttactggtgc gctggtgttt ggtcagccga gcgtgcaagt gagtatttac
      721 ccgttccgca tgaccgacgc caatatgaag cgccataaat attccaactt taaggacttc
      781 tgggagcaac tgaagccggg ttacgactac tttgagcaaa cccgtaagcc accgaccgtt
      841 tctgtggtca atggtcgtta cgtggtcagc aagccgttaa gccacgaagt tgtgcagcca
      901 caactggcat caaactacac gctccccgag gcaaaataag cgccattcgc ctggcataat
      961 cttttgccag gtttcattgc ccgtcagcgg ctgtgtcgca atcaccgtga ccacatcatt
     1021 cggtgtggtc tgcgagctga agtcgatttc tacatcctga tccagcagcg ttgccacgcc
     1081 aaacggtgcg cggcgggtga tccagtgcag attcgtcgag caatacgcca ttacatagcg
     1141 cccatccgaa agcagcatgt tgaaaacgcc cttctgccgc agttcgtccg ccagtgaagc
     1201 gatatattta aacactgctg ccatgttgcc cggcgtgcgc gggtaacgct gcgttaattt
     1261 atgcagcagc cagcagaagg ctttttcgct gtcggtttcg cctaccgggc ggaagttgcc
     1321 ggtttccagt gatttgtagc ccgtcagttg tccgttatgg gcataagtcc agttacgccc
     1381 ccataactcg cgggtaaatg ggtgagtatt ttccaacgcc acctcgcccc gattagcctg
     1441 gcgaatatga gccaccaccg aacaggattt tatcgggtag tcctggacaa gtttggcgat
     1501 gggggaatta aagctgggtt gtggatcttt aaatgtgcga cagcctttac cttcgtaaaa
     1561 ggtaatgccc cagccatctt tatgtggccc ggttccacca ccacgctgta caagtccggt
     1621 gaaactaaag cagatatcgg tagggacgtt ggcgctcatc ccgagcaatt cgcacatggg
     1681 taacctccac aacagcggga gcgcatggcc cccggcgaag attgatttaa gaattttcag
     1741 gtcggatgcg gcgtaaacga attattcggc ctacggttcg cgtacagatt tgtaggcatg
     1801 ataagacgcg tcagcatcgc atcaggcatc agcgcacaag tgccggatgc ggcgtaaacg
     1861 ccttatccgg cctacgccag acttacttaa ccatctcttt ttcaattaac tggatcagga
     1921 tatggatcac tttaatgtga atctcctgaa tgcggtcggc ataaccaaag tgcggtacgc
     1981 gaatttcgat atccgccgtg ccagccattt tgccgccgtc tttaccggtc agggtgatca
     2041 ctttcatccc cttctcacgc gccgctgcga tcgctttgat cacgtttgca gagttaccgg
     2101 aggtggagat ccccagcagt acatcgcctt cgcgacctac cgcttcaacg tagcgggaga
     2161 aaatatcatt gaaaccgaaa tcattaccga cgcaggaaat atgactaacg tcagaaatag
     2221 caatcgccgg gtagcccgga cggttttcac ggtagcgacc ggtcaactct tcggcaaagt
     2281 gcatagcgtc gcaatgggaa ccgccgttgc cgcaggaaag cactttgcca ccggctttaa
     2341 agctgtctgc taacaggacc gccgcgcgct gaatggcgtg aatattggcg tcatctttta
     2401 aaaagttagc cagcgtttcc gccgcttcgt tcagttcgtt acgaataaga tcttggtaca
     2461 tgaggatatc cttcagcata aatgtaatag acaaaatgca gtgtaccgga taccgccaaa
     2521 agcgagaagt acgggcaggt gctatgacca ggactttttg acctgaagtg cggataaaaa
     2581 cagcaacaat gtgagctttg ttgtaattat attgtaaata cattgctaaa tgtatttaca
     2641 tccactacaa ccatatcatc acaagtggtc agacctccta caagtaaggg gcttttcgtt
     2701 atgatgattt tgagtattct cgctacggtt gtcctgctcg gcgcgttgtt ctatcaccgc
     2761 gtgagcttat ttatcagcag tctgattttg ctcgcctgga cagccgccct cggcgttgct
     2821 ggtctgtggt cggcgtgggt actggtgcct ctggccatta tcctcgtgcc atttaacttt
     2881 gcgcctatgc gtaagtcgat gatttccgcg ccggtatttc gaggtttccg taaggtgatg
     2941 ccgccgatgt cgcgcactga gaaagaagcg attgatgcgg gcaccacctg gtgggagggc
     3001 gacttgttcc agggcaagcc ggactggaaa aagctgcata actatccgca gccgcgcctg
     3061 accgccgaag agcaagcgtt tctcgacggc ccggtagaag aagcctgccg gatggcgaat
     3121 gatttccaga ttactcatga gctggcggat ctgccgccgg agttgtgggc gtaccttaaa
     3181 gagcatcgct tcttc
//
LOCUS       DADMIB010000279         3172 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.287, whole genome shotgun sequence.
ACCESSION   DADMIB010000279 DADMIB010000000
VERSION     DADMIB010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.287"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            345..504
                     /locus_tag="JNZ89_004325"
                     /pseudo
     CDS             345..504
                     /locus_tag="JNZ89_004325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066419.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(722..2812)
                     /gene="iha"
                     /locus_tag="JNZ89_004326"
     CDS             complement(722..2812)
                     /gene="iha"
                     /locus_tag="JNZ89_004326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional siderophore receptor/adhesin Iha"
                     /protein_id="HAY8937985.1"
                     /translation="MRITTLASVVIPCLGFSASSIAAAEDVMIVSASGYEKKLTNAAA
                     SVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIRGMPASYTLILIDG
                     VRQGGSSDVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKN
                     ADKWLSSVNAGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSL
                     SDTAATRIPYPTESQNYNLGARLDWKASEQDVLWFDMDTTRQRYDNRDGQLGSLTGGY
                     DRTLRYERNKISAGYDHTFTFGTWKSYLNWNETENKGRELVRSVLKRDKWGLAGQPRE
                     LKESNLILNSLLLTPLGESHLVTVGGEFQSSSMKDGVVLASTGETFRQKSWSVFAEDE
                     WHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLH
                     KGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIVSY
                     SINDNTNSYVNSGKARLHGVEFAGTLPLWSEDVTLSLNYTWTRSEQRDGDNKGAPLSY
                     TPEHMVNAKLNWQITEEVASWLGARYRGKTPRFTQNYSSLSAVQKKVYDEKGEYLKAW
                     TVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYSAGKSTLYAGDYFQTGSSTTGYV
                     IPERNYWMSLNYQF"
BASE COUNT          795 a          836 c          732 g          809 t
ORIGIN      
        1 gacctctcag taaatatcaa tacggttctg gcgagccgct tacgtgcagc agtcttatcc
       61 ggcagtttaa aggggaggac ggagaccaat gaggcactgg agcagattca gtgcagaggt
      121 gacctgcttt atcaaactta attgtgacaa aatggcgatt gagaaggtgc aattgactta
      181 tccggattcg gtcgtggcga ggtggtgccc ctgcattctg ctaaccgggt tatgagccag
      241 gagtcagcga tagacaaagg gacttatctg accgggcccc cggaaaaatg gcgggagaga
      301 atgatacctt cctgctgacg agaccggact ttgagatgac gagcgatagt gcggcagtga
      361 tgtacagcct gatcggtagc tgcaaaactt aacggaatcg agccggaaac gtggctacgc
      421 cacgtgatca gtgtaatcaa cacctggcct gccaaccgca tgaaagagtt gttgccctgg
      481 aacgtcactc tctctgtaaa ctaattttta ccccacgtcc ttcacggtgc gcttacactc
      541 tggacaagta tgtaaatgat aagttaaaaa taatccgtgc atttcctgtg acgatattag
      601 ttgttggtaa cgaaatctca ttagcggatc ggaaatgcac ttaacctaat acgttgccac
      661 tgttccgcca ggagttgcag tggcaacgta ttctaccgtc agtgatagcg ttttgttatt
      721 atcagaactg atagttcagc gacatccagt aatttcgctc aggtatcaca tatcctgttg
      781 ttgatgatcc cgtctggaag taatcaccgg catacagcgt actcttaccg gcactgtaca
      841 ggctcacgtc actgtaatcc ttgttgagca ggttattcac cgcagcattc agcgtcaggg
      901 catccgtcat cttccaggac agacctgcat ccaccaccgt ccaggctttc aggtattctc
      961 ctttctcatc atacactttc ttctgtacag cgctcagtga cgaataattc tgggtgaaac
     1021 gtggtgtttt cccgcgataa cgggcaccca gccatgatgc cacctcttcg gtgatctgcc
     1081 agttcagttt cgcattcacc atgtgttcag gggtataact cagcggcgca cctttgttat
     1141 caccatcacg ttgttcactt cgggtccagg tgtaattcag tgacagcgtg acatcctctg
     1201 accacagcgg caatgtgccg gcaaattcca caccgtgcaa ccgggccttt ccgctgttta
     1261 catagctatt ggtgttatca tttatggaat aagagacaat cttgttggag aagtcagtca
     1321 taaaacctgt gacattggca ttcagaccgg cggggttatc gtaatacacc ccagcctcat
     1381 aactgacgct ctcttccggc ttcaggtcgg ggttaccaag tagatttgtt tttccctgcc
     1441 cggacacacc actaatccct ttatgtagct gccccattct gggtgcctta tatcccgtgg
     1501 tcacaccgcc tttcagcgtc caggcatctg ccacatccca gaccagatat gcacgcggac
     1561 tgaagtgtcc cccgaattgc tcatgatgtt catagcggct gcccgcagtc agcgcaagtg
     1621 catccgtgag atgccactca tcctcagcaa ataccgacca gcttttctgc cggaaagttt
     1681 cacctgtgct ggcaaggaca actccgtctt tcatggacga gctctgaaac tcgcccccca
     1741 ccgtaaccag atgagattct cccagagggg taagcagtaa tgaattcagg ataaggttcg
     1801 attccttaag ctcccgcggc tgaccggcaa gcccccattt gtcgcgcttc agtacactgc
     1861 gtacgagctc acgaccttta ttttctgtct cgttccagtt cagatacgat ttccatgttc
     1921 cgaaggtgaa agtatgatca tagccagctg aaattttgtt ccgctcatag cgcagggtcc
     1981 ggtcatatcc ccccgtcaga ctccccagtt gcccatcccg gttatcataa cgctgccggg
     2041 tggtatccat atcaaaccag agcacatcct gctccgacgc cttccagtca agacgtgcac
     2101 caagattata attctgtgac tccgtgggat aaggaatacg cgtggctgct gtatcgctca
     2161 gtgatgtgac cgatgagccc tgacgctgtt gtgtgctacc gcgtacctgc aggctgacag
     2221 aatcatccac aagggggcca ctgctccaga aattaaactg gctgctgtta ccccatttgt
     2281 tgctttcctg cagattcagc cctgcattga cggaagagag ccatttgtct gcattctttc
     2341 tggtaatgat attcaccaca ccgcccatcg catcagagcc atacagtgtg gacatcggcc
     2401 ccctgataac ctcaatacgc tcaatggcgg ccagaggggg catgaacccg gtattcatgg
     2461 cagaaaaacc gttgggagtc acgtcactgc ttccgccctg acgaacacca tcaatcagta
     2521 tcagcgtgta actggctggc attcctcgga tgctgatttc cagcccaccg gttttacccg
     2581 taccactttc aacatccaca ccctctactg atctcagagc ctccgccaga tcgtggtact
     2641 ggctggactg caattcctcc tggctaatca cagaaacact ggcggctgcg ttagtcagct
     2701 ttttctcata gccggatgcc gagacaatca tcacatcctc tgcagcagct atgctgctgg
     2761 ctgaaaatcc gagacaggga atgactacgg aagccagagt ggttattcgc atattactaa
     2821 tctccgatca tgttaaccgg caagacaata cacaaataca aacaataatg agaataattt
     2881 atatttgcct tttacaaaaa ataaagatta ttaacaaaac taaatataaa taacaactgc
     2941 ctcggcatgc cagttaacag ctatccgtat ggcgtgttcg gttttgcgaa taaaaaatgg
     3001 ttactgtaga agcggatttc caccacatgt caaccatgaa tggtcagtgg tgcgagacga
     3061 ctgggatgat ttggtcgatg acttcttccg gtgaatactg atagaaacat tgaaatattg
     3121 taagagaaag cgttcaaaat tctgtggcac gtgaaaaatt ctacagcgtc at
//
LOCUS       DADMIB010000280         3144 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.288, whole genome shotgun sequence.
ACCESSION   DADMIB010000280 DADMIB010000000
VERSION     DADMIB010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.288"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..141
                     /locus_tag="JNZ89_004327"
     CDS             1..141
                     /locus_tag="JNZ89_004327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8937986.1"
                     /translation="MRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNP
                     RS"
     gene            210..1304
                     /gene="mnmH"
                     /locus_tag="JNZ89_004328"
     CDS             210..1304
                     /gene="mnmH"
                     /locus_tag="JNZ89_004328"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HAY8937987.1"
                     /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMN
                     NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRIDAWRAACLQNPQGILCCARGGQ
                     RSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ
                     QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDES
                     RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ
                     EYCEYLHHGLSAIKRRLGLQRYNELAAQLDTALTTQLTTGSTDGHLAWLVPLLKEYYD
                     PMYRYQLEKKAEKVVFRGEWAEVAEWVKAR"
     gene            1420..1785
                     /locus_tag="JNZ89_004329"
                     /pseudo
     CDS             1420..1785
                     /locus_tag="JNZ89_004329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014543172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(2347..2796)
                     /locus_tag="JNZ89_004330"
     CDS             complement(2347..2796)
                     /locus_tag="JNZ89_004330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001348602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937988.1"
                     /translation="MLAISSNLSKMIIFIFAIIIIVVLCVITYLYLYKDESLVSKHYI
                     NYMAIPENDGVFTWLPDFFSHVAVDISIYTNVEDDYFFSYFSLTNDDGGRFKKTLTVR
                     AREQVAKIVSKNDPDTKKVWCKYGKIPGQGDGVNLFLLVKLMLRIIL"
     gene            complement(2777..3144)
                     /locus_tag="JNZ89_004331"
                     /pseudo
     CDS             complement(2777..3144)
                     /locus_tag="JNZ89_004331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308587.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
BASE COUNT          841 a          727 c          712 g          864 t
ORIGIN      
        1 atgcgccctc cttcgccatt gagtctggca tggcgcaaat ttggcagcgg caaagcggta
       61 gaagatattg tgaccttgtt tacccagcgc aggccggaaa tcagcggatt tttagaaatt
      121 ttcggcaacc cacgcagtta aaaatcaagt ttccttgcgc gttggcgcgt aaaatagcgc
      181 gcaagctgat ttgaggttca cttttaacta tgcaagagag acacacggaa caggactatc
      241 gtgccctgct gattgctgat acgcccatta ttgatgttcg cgcccctatc gagtttgagc
      301 aaggcgcaat gcccgccgct atcaatctgc cgttaatgaa taacgatgaa cgcgccgccg
      361 ttggcacctg ctataaacag caagggtcag acgcggcgct ggcgctgggg cataaactgg
      421 tggcgggtga aattcgtcag cagcgcatag acgcctggcg ggcagcgtgc ctgcaaaatc
      481 cgcaaggtat tctctgctgt gcccgtggcg gtcaacgctc acatattgtg caaagctggt
      541 tgcatgcagc ggggattgat tatccgctgg tggaaggcgg ttataaggca ctgcgccaga
      601 ccgcgattca ggcgactatt gaactggcac aaaaaccgat agtgctgatt ggcggttgta
      661 ccggcagcgg taaaacgctg ttagtgcagc aacagccgaa cggtgtcgat ctggaagggc
      721 tggcgcgtca tcgcggttcg gcgtttggtc gcacgttaca accacaactt agccaggcga
      781 gttttgaaaa tctgctggct gccgaaatgc taaaaaccga cgcccgtcag gatttgcgcc
      841 tgtgggtgct ggaagatgaa agccggatga tcggttcgaa tcacctgccg gaatgtctgc
      901 gcgagcgaat gactcaggcg gcgattgcgg tggtagaaga tccgtttgag atccgtcttg
      961 aacgcctgaa cgaagagtat ttcttgcgta tgcatcatga ttttacccac gcgtacggcg
     1021 acgaacaggg ctggcaggaa tattgcgaat acctgcatca cggactttcg gctattaagc
     1081 gtcggctggg gttacagcgc tataacgaac tcgctgccca gctggatacg gcgctgacaa
     1141 cgcaactcac caccggcagc accgacggtc atctggcctg gctggtgccg ttacttaaag
     1201 aatattacga cccaatgtat cgctatcagc ttgagaaaaa agcggaaaaa gttgtctttc
     1261 gcggtgagtg ggcggaagtg gcggaatggg ttaaggcgcg gtaatgaggg acgtatttgt
     1321 attagtcgcg acttgatctg acacatggcc ttgaaaggtt gagagttacc ggttttgata
     1381 tgagtgtcga atccttatcc aaaacaagag gtaactctca tgcttcatac tgccaatccc
     1441 gtcatcaaac acaaagccgg tttgctcaat ctggctgaag aactcagcaa cgtatcaaaa
     1501 gcctgtaaaa tcatgggcgt ttcgcgtgat acgttttatc gttaccgcga actggtcgct
     1561 gaaggcggtg tggatgcgca gattaatcgt agtcgccgcg ctcctaacct taagaaccgt
     1621 accgatgagg caactgaaca ggctgttgtt gattacgccg tcgctttccc gacacatggt
     1681 cagcaccggg ccagcaacga gctgcgtaaa caggggggtt ttatctccga cagtggtgtc
     1741 cgttctgtct ggttactcca taaccttgag aatctcaaaa gacgatactg aacaaatttt
     1801 atcaggtgac gttccgtaaa aagttgtatg gagttctcga tgcagtcggc gcgactatca
     1861 gtacccccgc tgaaccctgg actatcgggc cgccgtactg gggcatgtca ccctggcgtg
     1921 ccgctggttt tccgctaatg gtttatttcc tctttctttc ccggcaagaa tttattttaa
     1981 tccggaagga ttatttattt tcagataggg actcacatta aacacgtaac attttaatta
     2041 atgcatggct gaatatgtat tacacaatgt cagatatcgt aaaagaccag tgcaattcta
     2101 tgtaaactct ctgactgttc attttatttg ttgtttcagg gtcggaactc accctcaata
     2161 aacaactgaa tacgagtaga tattcatcgt ctgagctata tggctttaca caatagccga
     2221 catgtctttt ctcagtcagg aattttactt ttcctcacta cgaagttgac gacttcgata
     2281 tgggatagac tcttaattca agcaattact ctgcacaagc atcaggcaat ccagctccaa
     2341 tatttgttat aaaataatgc gtaacattaa tttcaccaac aaaaaaaggt ttacaccatc
     2401 cccttgccct ggtatcttac catatttaca ccacactttt tttgtatctg gatcattctt
     2461 tgatacgatt ttcgccactt gttccctggc cctcactgtc aatgttttct taaacctacc
     2521 cccatcatca tttgttaggg aaaaataaga aaaaaaataa tcatcttcta catttgtgta
     2581 tattgatata tccaccgcta cgtgcgaaaa aaaatccggg agccatgtaa aaactccatc
     2641 attttctggt attgccatat agtttatgta atgtttactt acaagagatt catctttgta
     2701 taaataaaga taagtaatta cgcataaaac aacaatgatt ataatagcaa aaataaatat
     2761 tatcatcttt gatagattac ttgagatagc cagcatcttg taaagccttt atcgtttttt
     2821 tatgctctgg attaatataa tcactacatc tatctgagca atctgttgtt gatggacatg
     2881 tcaacccatg gtcatttaca gccaagtctt ttttattatc ttcaatcatt tcagaatggg
     2941 atagctttac ttttctgccg tacataccga acagatttaa tccgtaatct ctaatctctt
     3001 tttcataacc cagccctttc gccgatcggc taacaccagc gtcatttaat ttagacactc
     3061 gacaaaatgc catacaatgg aaaaattgat cagtcccacc taaatttaat ctcttcataa
     3121 gtatcagata atatatccca tgct
//
LOCUS       DADMIB010000281         3136 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.289, whole genome shotgun sequence.
ACCESSION   DADMIB010000281 DADMIB010000000
VERSION     DADMIB010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3136)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.289"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            34..486
                     /locus_tag="JNZ89_004332"
     CDS             34..486
                     /locus_tag="JNZ89_004332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000237816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)--rifampin ADP-ribosyltransferase Arr-2"
                     /protein_id="HAY8937989.1"
                     /translation="MVKDWIPISHDNYKQVQGPFYHGTKANLAIGDLLTTGFISHFED
                     GRILKHIYFSALMEPAVWGAELAMSLSGLEGRGYIYIVEPTGPFEDDPNLTNKKFPGN
                     PTQSYRTCEPLRIVGVVEDWEGHPVELIRGMLDSLEDLKRRGLHVIED"
     gene            807..2066
                     /locus_tag="JNZ89_004333"
     CDS             807..2066
                     /locus_tag="JNZ89_004333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001256773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol efflux MFS transporter CmlA5"
                     /protein_id="HAY8937990.1"
                     /translation="MRSKNFSWRYSLAATVLLLSPFDLLASLGMDMYLPAVPFMPNAL
                     GTTASTIQLTLTTYLVMIGAGQLLFGPLSDRLGRRPVLLGGGLAYVVASMGLALTSSA
                     EVFLGLRILQACGASACLVSTFATVRDIYAGREESNVIYGILGSMLAMVPAVGPLLGA
                     LVDMWLGWRAIFAFLGLGMIAASAAAWRFWPETRVQRVAGLQWSQLLLPVKCLNFWLY
                     TLCYAAGMGSFFVFFSIAPGLMMGRQGVSQLGFSLLFATVAIAMVFTARFMGRVIPKW
                     GSPSVLRMGMGCLIAGAVLLAITEIWASQSVLGFIAPMWLVGIGVATAVSVSPNGALR
                     GFDHVAGTVTAVYFCLGGVLLGSIGTLIISLLPRNTAWPVVVYCLTLATVVLGLSCVS
                     RVKGSRGQGEHDVVALQSAESTSNPNR"
     gene            2331..3131
                     /locus_tag="JNZ89_004334"
     CDS             2331..3131
                     /locus_tag="JNZ89_004334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032488483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-10"
                     /protein_id="HAY8937991.1"
                     /translation="MKTFAAYVIIACLSSTALAGSITENTSWNKEFSAEAVNGVFVLC
                     KSSSKSCATNDLARASKEYLPASTFKIPNAIIGLETGVIKNEHQVFKWDGKPRAMKQW
                     ERDLTLRGAIQVSAVPVFQQIAREVGEVRMQKYLKKFSYGNQNISGGIDKFWLEGQLR
                     ISAVNQVEFLESLYLNKLSASKENQLIVKEALVTEAAPEYLVHSKTGFSGVGTESNPG
                     VAWWVGWVEKETEVYFFAFNMDIDNESKLPLRKSIPTKIMESEGIIGG"
BASE COUNT          749 a          716 c          828 g          843 t
ORIGIN      
        1 tgcagccaaa tcccaacaat taagggtctt aaaatggtaa aagattggat tcccatctct
       61 catgataatt acaagcaggt gcaaggaccg ttctatcatg gaaccaaagc caatttggcg
      121 attggtgact tgctaaccac agggttcatc tctcatttcg aggacggtcg tattcttaag
      181 cacatctact tttcagcctt gatggagcca gcagtttggg gagctgaact tgctatgtca
      241 ctgtctggcc tcgagggtcg cggctacata tacatagttg agccaacagg accgttcgaa
      301 gacgatccga atcttacgaa caaaaaattt cccggtaatc caacacagtc ctatagaacc
      361 tgcgaaccct tgagaattgt tggcgttgtt gaagactggg aggggcatcc tgttgaatta
      421 ataaggggaa tgttggattc gttagaggac ttaaagcgcc gtggtttaca cgtcattgaa
      481 gactagtcct ttgcataaca aagccatcaa accggacgcc agagattccg cgcctgttgc
      541 gcatggcttc gccattttat gcgcaatagg cgcgccaccc tgtcgccgtt tatggcggcg
      601 ttgggcgcac aataaggctc ctcgcagagt tgcttgaaag ttgttacgat tcaaattcaa
      661 tcatgagata gtcagcagat gagcacttcc aagaacgcag acaagtaagc cgcagcaacc
      721 ttcatttttc ggttgttgcg gcgttctcat gaatcctttt gctctacggg agcgccgcca
      781 aatcctttgt tcaaggagat ggtttcgtgc gctcaaaaaa ctttagttgg cggtactccc
      841 ttgccgccac ggtgttgttg ttatcaccgt tcgatttatt ggcatcactc ggcatggaca
      901 tgtacttgcc agcagtgccg tttatgccaa acgcgcttgg tacgacagcg agcacaattc
      961 agcttacgct gacaacgtac ttggtcatga ttggtgccgg tcagctcttg tttggaccgc
     1021 tatcggaccg actggggcgc cgccccgttc tactgggagg tggcctcgcc tacgttgtgg
     1081 cgtcaatggg cctcgctctt acgtcatcgg ctgaagtctt tctggggctt cggattcttc
     1141 aggcttgtgg tgcctcggcg tgccttgttt ccacatttgc aacagtacgt gacatttacg
     1201 caggtcgcga ggaaagtaat gtcatttacg gcatactcgg atccatgctg gccatggtcc
     1261 cggcggtagg cccattgctc ggagcgctcg tcgacatgtg gcttgggtgg cgggctatct
     1321 ttgcgtttct aggtttgggc atgatcgctg catctgcagc agcgtggcga ttctggcctg
     1381 aaacccgggt gcaacgagtt gcgggcttgc aatggtcgca gctgctactc cccgttaagt
     1441 gcctgaactt ctggttgtac acgttgtgtt acgccgctgg aatgggtagc ttcttcgtct
     1501 ttttctccat tgcgcccgga ctaatgatgg gcaggcaagg tgtgtctcag cttggcttca
     1561 gcctgctgtt cgccacagtg gcaattgcca tggtgtttac ggctcgtttt atggggcgtg
     1621 tgatacccaa gtggggcagc ccaagtgtct tgcgaatggg aatgggatgc ctgatagctg
     1681 gagcagtatt gcttgccatc accgaaatat gggcttcgca gtccgtgtta ggctttattg
     1741 ctccaatgtg gctagtgggt attggtgtcg ccacagcggt atctgtgtcg cccaatggcg
     1801 ctcttcgagg attcgaccat gttgctggaa cggtcacggc agtctacttc tgcttgggcg
     1861 gtgtactgct aggaagcatc ggaacgttga tcatttcgct gttgccgcgc aacacggctt
     1921 ggccggttgt cgtgtactgt ttgacccttg caacagtcgt gctcggtctg tcttgtgttt
     1981 cccgagtgaa gggctctcgc ggccaggggg agcatgatgt ggtcgcgcta caaagtgcgg
     2041 aaagtacatc aaatcccaat cgttgagaga atgtggcaag ctatcgccca acaaatcgct
     2101 gcagccgacc caaaaccgct acgcggtttc ggtcggctga gctcaggcgt taggcctcgc
     2161 cgaagcgaaa gatcgctact tgaagtgttg acgcctttgt tttaaagttt cgcgtctatc
     2221 tttctgattt tgttaaaaaa tcagactttg attaatcatg ttagacgtca gaggtatttt
     2281 gacttaaacg cctctgaggt cgaattaacg ttagccacca agaaggtgcc atgaaaacat
     2341 ttgccgcata tgtaattatc gcgtgtcttt cgagtacggc attagctggt tcaattacag
     2401 aaaatacgtc ttggaacaaa gagttctctg ccgaagccgt caatggtgtc ttcgtgcttt
     2461 gtaaaagtag cagtaaatcc tgcgctacca atgacttagc tcgtgcatca aaggaatatc
     2521 ttccagcatc aacatttaag atccccaacg caattatcgg cctagaaact ggtgtcataa
     2581 agaatgagca tcaggttttc aaatgggacg gaaagccaag agccatgaag caatgggaaa
     2641 gagacttgac cttaagaggg gcaatacaag tttcagctgt tcccgtattt caacaaatcg
     2701 ccagagaagt tggcgaagta agaatgcaga aataccttaa aaaattttcc tatggcaacc
     2761 agaatatcag tggtggcatt gacaaattct ggttggaagg ccagcttaga atttccgcag
     2821 ttaatcaagt ggagtttcta gagtctctat atttaaataa attgtcagca tctaaagaaa
     2881 accagctaat agtaaaagag gctttggtaa cggaggcggc acctgaatat ctagtgcatt
     2941 caaaaactgg tttttctggt gtgggaactg agtcaaatcc tggtgtcgca tggtgggttg
     3001 ggtgggttga gaaggagaca gaggtttact ttttcgcctt taacatggat atagacaacg
     3061 aaagtaagtt gccgctaaga aaatccattc ccaccaaaat catggaaagt gagggcatca
     3121 ttggtggcta aaacaa
//
LOCUS       DADMIB010000282         3115 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.290, whole genome shotgun sequence.
ACCESSION   DADMIB010000282 DADMIB010000000
VERSION     DADMIB010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3115
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.290"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            590..874
                     /locus_tag="JNZ89_004335"
     CDS             590..874
                     /locus_tag="JNZ89_004335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858243.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HAY8937992.1"
                     /translation="MIYGGFMKSGVQLNLRARESQRILIDAAAEILHKSRTDFILEMA
                     CKAAEDVILDRRVFNFNDRQYEEFIEMLDAPVADDPAIEKLLARKPQWDV"
     gene            862..1347
                     /locus_tag="JNZ89_004336"
     CDS             862..1347
                     /locus_tag="JNZ89_004336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8937993.1"
                     /translation="MGCVTAPEPLSSFHQVAEFVSGEAVLDDWLKQKGLKNQAIGATR
                     TFVVCRKGTQQIVGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDVSFRGKG
                     LGADLLHDAVRRCYRVAENIGVRAIMVHALTENAKQFYIHHGFKPSKTQVQTLFLKLP
                     Q"
     gene            1381..2559
                     /gene="ltrA"
                     /locus_tag="JNZ89_004337"
     CDS             1381..2559
                     /gene="ltrA"
                     /locus_tag="JNZ89_004337"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HAY8937994.1"
                     /translation="MCVATREPPGCDGQTLKMFDQQRDGNLYKIWNRLCSGTWFPPPV
                     LEKRIPKSNGKERILGIPTVSDRIAQGAIKLFMEEKLDPIFHADSYGYRPGKSAHDAL
                     KQCAIRCWRYSWILEVDISAFFDHVKHDLVLKALEHHGMPKWVILYCRRWMEAPMQSC
                     ENGELITRTRGTPQGGVISPLLANLFLHYAFDLWMEREYRGVPFERYADDIVVHCSRM
                     SDATRLKNRLSERFSEVGLVLNAGKTNIAYIDTFKRRNVATSFTFLGYDFKVRTLKNF
                     KGERYRKCMPGASNAAMRKITETIKKWRIHRSTAESLLDFARRYNTIVRGWIEYYGKF
                     WSRNFNYRLWSAMQSRLLKWMQSKYRLSNRKAQRKLTLVRKEYPKLFVHWYLLRASNE
                     "
     gene            2642..2796
                     /locus_tag="JNZ89_004338"
                     /pseudo
     CDS             2642..2796
                     /locus_tag="JNZ89_004338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(2850..3115)
                     /locus_tag="JNZ89_004339"
                     /pseudo
     CDS             complement(2850..3115)
                     /locus_tag="JNZ89_004339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016154415.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          823 a          677 c          836 g          779 t
ORIGIN      
        1 ggcatatagg cagcatgaac gcaacacagg ctctcgtacg gaacgtggga acctgtcgtc
       61 tcgatgctaa gggagcggcg cggagcagag gcactgcaag cgcctgagta ccgatgcgag
      121 acacaggggc agatggcttc gtagtagtga ggaagtgcct gtaatgggca tggagcgaag
      181 ggggtcagtc gaggcgtttg aggttaccaa tcgaagctat acccggtaat ggcgcaggtt
      241 gacctgcact tggccaagtg gattgcccgc aaacacaagc gagcgcgagg tagtctggtg
      301 cgtgcattcg agtggttact gcgaattcgt cacgactgcc cgacgctgtt tgcacactgg
      361 tgcttagctt acgatacttg aatggttcaa cgacaagagc cgtatgacgc gagagtgtca
      421 cgtacggttc cgtgggagcg taggggggcg gtgcccctgc gccacccgat atcccctttg
      481 agtgcggtta cgtccacaga ggtaaatgcc gctgacgcgg catctgtaat ctgttacttt
      541 gtgtacatca tttgctatat attgtcaata tgctattgtt gtaaagcaaa tgatatacgg
      601 aggctttatg aaatcaggtg ttcagctcaa tctcagagca agagaatcac agcggatact
      661 cattgatgct gctgcagaaa ttcttcataa gtcgcgtaca gatttcattc tggaaatggc
      721 ctgtaaagct gctgaagatg ttattctcga ccggcgggtg tttaatttta atgacaggca
      781 atatgaagag ttcattgaaa tgcttgatgc tccggttgca gatgatcctg ccatcgaaaa
      841 attgctggca aggaaacctc aatgggatgt gtaactgcac cagaaccttt atcctcattt
      901 catcaggtcg ctgaatttgt cagcggtgaa gctgtacttg atgactggtt aaagcagaag
      961 gggctaaaaa atcaggcaat cggagccacc cggacttttg ttgtatgcag aaaaggtacg
     1021 caacaaatag tcggttttta ctcactggcc actggtagtg tcaatcatac agaagctaca
     1081 ggtaaccttc ggcgcaatat gccagacccc attcctgtaa ttatacttgc acgcctggct
     1141 gtagatgtgt catttcgagg aaaagggctt ggcgcggatt tacttcatga tgcagttcgt
     1201 cgttgttaca gggttgccga aaatatcggt gtgcgtgcaa ttatggttca tgcgcttacg
     1261 gaaaacgcaa aacagtttta tattcatcat ggttttaagc catcaaaaac tcaggtgcaa
     1321 acattgtttc ttaaactccc tcaataggga gtaatgcact ggtctgggca tcatatctgg
     1381 atgtgcgtcg caacaaggga gccccccgga tgcgacgggc agactttgaa aatgttcgac
     1441 cagcaacgtg atggcaatct atacaagatc tggaaccggc tatgttcggg aacatggttt
     1501 ccgccaccag tgctggaaaa acggatcccg aagtcgaatg gcaaggaacg cattctgggg
     1561 atcccaacag tatccgatcg aattgctcag ggagcgataa aacttttcat ggaagaaaag
     1621 cttgacccga ttttccatgc tgattcatat ggttaccgac caggcaaatc agctcatgac
     1681 gctctgaaac aatgtgccat ccggtgctgg cgttatagct ggatactgga agtggacatc
     1741 agtgcgtttt tcgaccatgt gaaacatgat ctggtgctca aagctctgga acaccacggg
     1801 atgcctaaat gggtcatcct gtactgtcga cgctggatgg aagcgccaat gcagagttgt
     1861 gaaaatggag aattaataac ccgaacacga ggcactccgc agggcggggt cattagtccg
     1921 ctacttgcta acttgttcct tcactatgca tttgatttgt ggatggaaag agaatatcgg
     1981 ggggtaccgt ttgagaggta cgctgacgat attgtagtac attgttcacg aatgagtgat
     2041 gcaacaaggc taaagaacag gttatcggag cgcttctcgg aagtcgggct ggtcctgaat
     2101 gcagggaaaa cgaatatcgc ctacattgac acgtttaaaa ggagaaacgt cgcaacgagt
     2161 ttcacctttc tcggatatga cttcaaagtg cgtacgctga agaatttcaa aggcgaacgg
     2221 taccgaaaat gcatgccggg tgcgtcaaat gcagcaatgc gcaaaataac agaaacaatc
     2281 aagaagtggc gtatacatcg ctcaacagct gagagtttgc tggattttgc gaggcgctac
     2341 aatacgatag tgagaggctg gatcgagtac tacggaaagt tctggtccag aaatttcaac
     2401 tatcgactgt ggagtgcaat gcagtcacgt ctgctcaagt ggatgcagtc taaatacaga
     2461 ctttcgaacc ggaaggctca gcgaaagctg acgctggtaa ggaaggagta tccgaagcta
     2521 tttgttcact ggtatttact acgtgcatca aatgagtgat caagagccgt atgacgcgag
     2581 agtgtcacgt acggttccgt gagcagccgg ggagtgaaat tctctccggc tgactcgact
     2641 cgcgggttcc gacagcgatg acgaacatgc ggcggtgttg tactcgctga tcggcacatg
     2701 ccgtctgaac aatgtggaac cagaaaatgg ctgcgttacg tcattgagca tatccaggac
     2761 tggccggcaa accgggtacg tgatctgttg ccctagaaag ttgatctgag ctctcagtaa
     2821 atatcaatac ggttctgacg agccgcttac ttttggcgta attctgctgc gcctttactg
     2881 aacacaatgc cgtattcagc aagaagtcca cgaatgtgat ttatcagttg tgtcctttcc
     2941 attgaaacca accgacgcat attcaaaaaa gtttggacgt cctgttgctc cagagttttt
     3001 attggtacgg gtcgtatagt tccatgttgg caggcctcag ctattgcctg tgcgtcgtta
     3061 taatcatttt tctggcaccg ctgataagct ttaacatgtt gtgccggaag caata
//
LOCUS       DADMIB010000283         3102 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.291, whole genome shotgun sequence.
ACCESSION   DADMIB010000283 DADMIB010000000
VERSION     DADMIB010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.291"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..329)
                     /locus_tag="JNZ89_004340"
     CDS             complement(<1..329)
                     /locus_tag="JNZ89_004340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8937995.1"
                     /translation="MSALYERSQLTQVMISSAPATAETMDKAEYLRLDCTIKEVQFTA
                     GQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLNQAQNALRDAYDNDALYAFKVL
                     FPSGKGF"
     gene            complement(395..739)
                     /locus_tag="JNZ89_004341"
     CDS             complement(395..739)
                     /locus_tag="JNZ89_004341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="HAY8937996.1"
                     /translation="MTEADLYPHLAHLAGGQVSPYVAPLLDGRPSVALPWVVFSLISS
                     VSADVMGGQAESSVSVQIDVYAGTVTQARQIRQDAREAIMLLAPGSVSEMQDYIPENR
                     CYRATLEFQVTV"
     gene            complement(736..1182)
                     /locus_tag="JNZ89_004342"
     CDS             complement(736..1182)
                     /locus_tag="JNZ89_004342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HAY8937997.1"
                     /translation="MIEILLDFSGLEDISRDLQLLSGAENNRVLREATRAGANVLKEE
                     VVSRTPVRRGKLRRNVVILSRRSRDGGMESGVHIRGVNPDTGNSDNTMKADNPRNAFY
                     WRFVEMGTVNMPPHPFVRPAFDVRSEQAAQVAIARMNRAIDEVLRR"
     gene            complement(1179..1499)
                     /locus_tag="JNZ89_004343"
     CDS             complement(1179..1499)
                     /locus_tag="JNZ89_004343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HAY8937998.1"
                     /translation="MISVLNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGA
                     EMAQAEIRIWVRGQSGREITAASRLHVLSGPWRDRILNVVGLPVPDATGGRLEILCRL
                     GGEK"
     gene            complement(1539..1865)
                     /locus_tag="JNZ89_004344"
     CDS             complement(1539..1865)
                     /locus_tag="JNZ89_004344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage gp6-like head-tail connector protein"
                     /protein_id="HAY8937999.1"
                     /translation="MTALLTLEEIKAHLRVDHDADDDMLMDKVRQATAVLLAYIQGSR
                     DKVLREDGELIPGEALTRMKGAAMRLTGMLYRNPDLAEREELLQGELPFSVSVLIYDL
                     RCPTVL"
     gene            complement(1862..2461)
                     /locus_tag="JNZ89_004345"
     CDS             complement(1862..2461)
                     /locus_tag="JNZ89_004345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001674594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HAY8938000.1"
                     /translation="MPAGKSLTPDDVRPMLEQMVTEAVSHIPVPRDGRDYDPDVLQKA
                     VLDAVSALPAPQDGRDATALEILPAIDVQKSFPRGTYATHQGGLWRAYEKTHGMRGWE
                     CLVDGVADIDVSMTGERLFSVVVRQSSGQRTEKTFSLPVMLYRGVFRAGETYHPGDTV
                     TWGGSLWHCNSMTEDKPREAHSSAWTLAAKRGRDAGGGK"
     gene            complement(2401..3066)
                     /locus_tag="JNZ89_004346"
     CDS             complement(2401..3066)
                     /locus_tag="JNZ89_004346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005055734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasin"
                     /protein_id="HAY8938001.1"
                     /translation="MTVSVNNYGVSDTKQVTLIADAGTAKLASLTSVYSFVVSTTEGA
                     TMTASVTDANGNPVEGIKVNFRGTSVTLSSTSVETDDRGFAEILVTSTEVGLKTVSAS
                     LADKPTEVISRLLNASADVNSATITSLEIPEGQVMVAQDVAVKAHVNDQFGNPVAHQP
                     VTFSAEPSSQMIISQNTVSTNTQGVAEVTMTPERNGSYMVKASLPVKVSPRMMCVRCL
                     NRW"
BASE COUNT          671 a          971 c          770 g          690 t
ORIGIN      
        1 ttaaagccct taccggacgg aaacagcacc ttaaacgcat acaacgcgtc attgtcatag
       61 gcatcacgca gggcgttctg ggcctgattc agataaaaat tacccgacat ggaaatctca
      121 gacgacgccc ccagaccgtt gatgttctcc tgctctgtgg agcagagcgt ggtcacatca
      181 atatcctgtt tctgaccggc ggtgaactgg acttccttga tggtgcagtc caggcgcaga
      241 tattccgcct tatccatagt ttcagcagtc gccggggcag atgaaatcat cacctgcgtc
      301 agctgtgagc gttcatacaa agcagacatt ctgcctcctg ataataaaaa acccgcacgc
      361 ggcggggtat ggttttgtag aaaaaaagaa aaagtcacac cgtgacctga aactccaggg
      421 ttgcacggta acagcggttt tccggaatat agtcctgcat ttcactgacg gatcccgggg
      481 ccagcagcat tatggcttca cgggcgtcct gacgtatctg acgcgcctgc gtcacagtcc
      541 cggcataaac gtctatctgc accgacactg aggactccgc ctgcccgccc atcacgtccg
      601 ctgacaccga tgaaatcagg ctgaaaacca cccacggaag cgccaccgac ggcctgccat
      661 ccagcagggg ggccacatac ggggacacct gcccgccggc aagatgcgcc agatgaggat
      721 acaaatccgc ctccgtcatc gtctcagtac ctcatcaatg gcccggttca tccgcgcaat
      781 cgccacctga gctgcctgtt cactgcgcac atcaaacgcc gggcgcacaa acgggtgcgg
      841 tggcatattc acggtcccca tttccacaaa ccgccagtag aaagcattgc gcgggttatc
      901 cgccttcatg gtgttatcgc tgttaccggt gtccggatta acaccacgga tatggacacc
      961 ggattccatc ccgccatcgc gggagcgccg ggaaaggatc accacattgc ggcgcagttt
     1021 tcccctgcgt accggtgtcc gtgacaccac ttcttctttc agcacattcg cacccgcacg
     1081 ggttgcctca cgcagcaccc ggttattttc cgcaccactc agaagctgca aatcgcggct
     1141 gatgtcctcc agccccgaaa aatccagcag gatttcgatc atttttcccc tcccagccga
     1201 cagagaattt ccagacgccc gccggtcgca tccggcacgg gcagcccgac aacgttcagg
     1261 atccggtcac gccatggacc actcagcaca tgaagtcgtg acgctgccgt gatttcccga
     1321 ccggactgac cgcgcaccca gatgcggatt tccgcctgcg ccatttccgc accggactgc
     1381 atccgctccc ggctgctcct gcctcggata tccgcatgaa ttttcccgca tgacacccat
     1441 tcttccgtca tttctccggc agcgttacgg gttaacaccg ggttcagaac acttatcatc
     1501 tatgtcagac gacctgcaga tattgccatt ccccctcctc ataacaccgt cggacaacgc
     1561 aaatcgtaaa tcagcacgga aacagaaaac ggcagctccc cctgaagcag ttcttcccgc
     1621 tccgcaagat ccggattccg gtacagcatc ccggtcagtc gcatggcagc ccccttcatc
     1681 cgggttaatg cctcgcccgg gatcagttca ccgtcctcac ggagcacttt atcccggctg
     1741 ccctgaatgt aggccagcag cacggcggta gcctgacgaa ccttgtccat cagcatgtca
     1801 tcatccgcgt catggtcgac acgcagatgt gccttgatct cttccagtgt cagtaatgcc
     1861 gtcattttcc gcctcctgca tcccgcccac gttttgcagc cagggtccag gctgatgaat
     1921 gagcttctcg gggtttatct tcggtcatac tgttgcagtg ccacagcgag cccccccacg
     1981 tcaccgtatc gccggggtgg taggtttcac cggctctgaa cacaccgcgg tagagcatca
     2041 ccggcaggga aaatgttttt tccgtacgct ggccactgct ctgccggacc accacagaga
     2101 acaaccgctc acccgtcatg ctgacgtcaa tatccgccac cccgtcaacc aggcattccc
     2161 atccccgcat cccgtgcgtt ttttcatacg cccgccagag tccgccctgg tgtgtggcat
     2221 acgtgccccg gggaaaggat ttttgaacgt caatggcggg gagtatttcc agagccgtgg
     2281 catcacgccc gtcctgcgga gccggcaggg cactcaccgc atccagaacc gccttctgca
     2341 gaacatccgg atcgtagtca cgaccatcac gcggaacagg gatatggctt acagcctccg
     2401 tcaccatctg ttcaagcatc ggacgcacat catccggggt gagactttta ccggcaggga
     2461 tgctttcacc atatacgaac cgtttctttc gggcgtcatg gtgacctcgg ctacaccctg
     2521 cgtattagta gagaccgtat tctggctgat gatcatttgc gaggatggct ctgcactgaa
     2581 tgtcacgggt tgatgcgcaa ccgggttgcc aaactggtcg ttaacgtgag ctttaactgc
     2641 tacgtcttgt gcgaccatta cctgaccttc cggtatctcc agactggtaa tcgtcgcaga
     2701 attaacatct gcactggcat tcagtaatcg cgagatgact tcagtaggtt tatctgccag
     2761 agaggctgaa actgttttca gtccgacctc ggtgcttgtc acaagaattt cagcgaaacc
     2821 ccgatcatcc gtttcaacgc tggtgctgct tagcgtgacg gaggttccgc ggaaattaac
     2881 ttttatgcct tctaccgggt tgccgttagc gtcagtgacg cttgccgtca tggttgcgcc
     2941 ctcggtcgtg ctgacgacga atgagtatac agaggttaag gaggctagtt ttgcggtacc
     3001 agcatcggca atcaaagtca cctgtttcgt atcactgaca ccataattgt tcacgctaac
     3061 tgtcacgggg taggtgccgg attttgtacc gctcagtgta ac
//
LOCUS       DADMIB010000284         3097 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.292, whole genome shotgun sequence.
ACCESSION   DADMIB010000284 DADMIB010000000
VERSION     DADMIB010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.292"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..923)
                     /gene="curA"
                     /locus_tag="JNZ89_004347"
     CDS             complement(<1..923)
                     /gene="curA"
                     /locus_tag="JNZ89_004347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415966.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent curcumin/dihydrocurcumin
                     reductase"
                     /protein_id="HAY8938002.1"
                     /translation="MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLR
                     TVYLSLDPYMRGRMSDEPSYSPPVDIGGVMVGGTVSHVVESNHPDYQPGDWVLGYSGW
                     QDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATG
                     PVGATVGQIGKLKGCRVVGGAGGAEKCRHAIEVLGFDVCLDHHAGDFAEQLVKACPKG
                     IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKR
                     IRLQGFIIAQDYGHRIHEFQKEMGQWVKEDK"
     gene            1104..1622
                     /gene="mddA"
                     /locus_tag="JNZ89_004348"
     CDS             1104..1622
                     /gene="mddA"
                     /locus_tag="JNZ89_004348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine sulfoximine/L-methionine sulfone
                     acetyltransferase"
                     /protein_id="HAY8938003.1"
                     /translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE
                     ARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS
                     RLIDEARDSGKHVMVAGIESQNQASLHLHHSLGFVVTAQMPQVGTKFGRWLDLTFMQL
                     QLDERTEPDAIG"
     gene            1619..2068
                     /locus_tag="JNZ89_004349"
     CDS             1619..2068
                     /locus_tag="JNZ89_004349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY8938004.1"
                     /translation="MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLV
                     GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV
                     LVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF"
     gene            complement(2069..2302)
                     /locus_tag="JNZ89_004350"
     CDS             complement(2069..2302)
                     /locus_tag="JNZ89_004350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcY family protein"
                     /protein_id="HAY8938005.1"
                     /translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ
                     QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL"
     gene            complement(2388..2561)
                     /locus_tag="JNZ89_004351"
     CDS             complement(2388..2561)
                     /locus_tag="JNZ89_004351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GhoT/OrtT family toxin"
                     /protein_id="HAY8938006.1"
                     /translation="MSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW
                     PMSFPVALLFSLF"
     gene            2756..2851
                     /gene="yncL"
                     /locus_tag="JNZ89_004352"
     CDS             2756..2851
                     /gene="yncL"
                     /locus_tag="JNZ89_004352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response membrane protein YncL"
                     /protein_id="HAY8938007.1"
                     /translation="MNVSSRTVVLINVFAAVGLFTLISMRFGWFI"
BASE COUNT          752 a          791 c          723 g          831 t
ORIGIN      
        1 attttatcct ctttcaccca ttgccccatc tccttctgaa actcatggat gcggtgacca
       61 taatcctgag cgataataaa cccttgcaag cgaatacgtt ttttcagcac cgttgccatc
      121 aacaggggta aacgatccgg accgggtggt agctctgtag cgttatagct gctcactaag
      181 ccacaaacgg gaatgcgcgc agatgtatta agtaatggta gcactgcatc aaatacctta
      241 ccgcccacgt tttcataata gatatcaata ccttttgggc acgctttcac cagttgttcg
      301 gcaaaatcac ccgcgtggtg atcaagacaa acatcgaagc ccagcacctc gatagcatgg
      361 cggcattttt ccgcgccacc ggcccccccc accaccctgc aacctttaag tttgccgatt
      421 tgccccaccg ttgctcccac aggacctgtc gccgcagcta ccaccaacgt ttcgccctct
      481 ttaggctgac cgatatccag cagccccata taagcggtaa agcctggcat ccccagcaca
      541 cccagcgacc acgatggatt ttgcggatga tcgccaagtt tcaccagatc atcaccactg
      601 gatatgtcat agtcctgcca tccactgtag cccagcaccc agtcgccagg ctgataatca
      661 ggatgattcg actccacaac atggctcacc gtgccgccga ccatcacgcc gccaatatca
      721 acaggcggtg aataagatgg ctcatcgctc atacgtccac gcatatacgg gtctagggac
      781 aaataaactg tgcgcagtaa cacctgtcct tcacccggtg tggcgacatc atcttcttca
      841 agacggaaat tctccggaac cggtgcgcca tgtggacgcg aggccagaac ccaacgtcga
      901 ttacgctgct tttgttgccc cataatgctc tcctgtgctt ttggcatgaa tccatcaata
      961 gtagcaggct cacgggattg gttttgtttg cagccgtcac atcccctctg caacacgcaa
     1021 taatttcatc gaggaatccg ttgcttcggg ctgttttcga tagtattgat aacatcatca
     1081 tcattatttt atcgaggcca gacatgtcca tccgttttgc ccgcaaagcc gattgtgctg
     1141 ccattgcgga aatttataac cacgccgtgt tgtatacggc ggctatctgg aatgaccaaa
     1201 cggttgatgc agataaccgc attgcctggt ttgaagcgcg gaccatagca ggttatccgg
     1261 tgctggtaag tgaagaagat ggcgtagtga cgggatatgc ctcgtttggc gactggcgta
     1321 gtttcgatgg ttttcgccat accgtggaac attcggttta tgtccatccc gatcatcagg
     1381 gcaaaggtct ggggcgtaaa ttgttaagcc gattgattga tgaagcgcgg gatagcggga
     1441 agcatgtcat ggtcgccggg atcgaatcgc aaaatcaggc ctcgctgcat ctgcaccatt
     1501 cgctgggatt tgtcgtcacc gcacaaatgc cgcaggtggg cactaaattt gggcgctggc
     1561 tggatctgac atttatgcag ttgcaactcg acgaacgcac tgaaccggac gcgattggat
     1621 gaatcagtcg ctcacccttg cttttttgat tgccgccgga attggtctgg tagtccagaa
     1681 cacgctgatg gtgcgcatca cccagacctc ctctaccatt ctcatcgcca tgttgctgaa
     1741 ctcactggtg gggattgtgc tctttgtttc tattttatgg tttaaacaag gcatggcggg
     1801 gtttggcgaa ctggtgtcca gcgtgcgctg gtggacactt atacccggct tgctgggatc
     1861 gttttttgtc ttcgccagta tcagcggata tcagaatgtg ggagcggcga caactattgc
     1921 agtactggtc gccagccagc taattggcgg tctgatgctg gatatcttcc gcagtcatgg
     1981 cgtaccacta cgggcgttgt tcggcccaat ttgtggcgca attttacttg tggttggcgc
     2041 ctggttggta gccagacgct cattttaatc agaggatggt gccgcctttg gttaactgtt
     2101 cgtggcgcgc ttccatatct tctttatgct tgcgaccgtg atgagcaata gcggtgcgca
     2161 aacgctgctg ctgggtgtag cgatcttccc gacttaactc cgcgtcatcg ctcagggcga
     2221 ttaataattc gttcatatgg gcaatgacgc tctcttcaat cgcggcatcc acgcgcgcga
     2281 tgacttcatc cagatgcgac atactttctc cttaaccact tgtgaaattt atcgattcat
     2341 ccaaatgata taagtctgcg tggtgccgtc aagccagtga gtaagattta aaacagtgaa
     2401 aacaacagcg ccaccgggaa actcatcggc catgttgccc ccaccagaaa ggcgcttaag
     2461 aaacggatgc gtttcttatc gtgagaaaga aaccaggtga taagaaatgc gattgctgcc
     2521 ataaccgcat aaaaaacaag catatgttga tagagagaca tgtacgggcg tccagccaga
     2581 tgaataaaac gcgcgcaaat atgcgtcatt ttttgacgtg catcaagttt tttcaccagt
     2641 ttgagaaaaa atcatcaaac agcaacttgc ccttatccat cttcagaatg agtattattg
     2701 cggattttct taacccgtac tatacacata ggggcaatga taaaaggtgg caaaaatgaa
     2761 tgtttccagt agaactgtag tactgataaa tgtctttgct gctgttggtt tgtttactct
     2821 tatctctatg agatttggct ggtttatttg atgtagtgat tttgcacgca gcacgtactg
     2881 tcagagaaat caactctctg acagtacgca agatcttctc atactctcca ggtttacaac
     2941 attatcctta atatttactt ctttttgctg gcatctacat tgaaatgagt agaaaacatc
     3001 cccctactgt cgtctataca aacagcttac tgattcaaac ggaatcttgt tttcacattt
     3061 ttctatcatg aatactttat acgcgcggga gtctata
//
LOCUS       DADMIB010000285         3067 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.293, whole genome shotgun sequence.
ACCESSION   DADMIB010000285 DADMIB010000000
VERSION     DADMIB010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.293"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(51..235)
                     /locus_tag="JNZ89_004353"
                     /pseudo
     CDS             complement(51..235)
                     /locus_tag="JNZ89_004353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311258.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
     gene            complement(397..471)
                     /locus_tag="JNZ89_004354"
     tRNA            complement(397..471)
                     /locus_tag="JNZ89_004354"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(436..438),aa:Arg,seq:cct)
     gene            complement(547..1479)
                     /locus_tag="JNZ89_004355"
     CDS             complement(547..1479)
                     /locus_tag="JNZ89_004355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HAY8938008.1"
                     /translation="MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHI
                     RQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGF
                     IIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEY
                     MPIFNEETHDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIIL
                     MTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMS
                     HAQIRNDMSNKRKAEARQKAERAENIKKNDKNPA"
     gene            1773..2528
                     /gene="mlaA"
                     /locus_tag="JNZ89_004356"
     CDS             1773..2528
                     /gene="mlaA"
                     /locus_tag="JNZ89_004356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding lipoprotein MlaA"
                     /protein_id="HAY8938009.1"
                     /translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF
                     NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTR
                     FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD
                     DGGDMADGLYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
                     QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE"
     gene            complement(2710..3045)
                     /locus_tag="JNZ89_004357"
     CDS             complement(2710..3045)
                     /locus_tag="JNZ89_004357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938010.1"
                     /translation="MAESFATGSDHQVVNELNGERLREPNEVFKRLGRAIRYNFQVDD
                     AKFRRDNVKEIISTLFANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEYQNEINQLS
                     APGVNFDDI"
BASE COUNT          767 a          709 c          711 g          880 t
ORIGIN      
        1 cccatctttt acggggtgaa ggtagatttc gtatgaaggg tatctgttgt ctcctgcaaa
       61 gtcataagcg gatattttcc tacggtcagt attttttcct taccgtcaat cttgtagcga
      121 agttgccata ccttttcccg gatacaggaa cataaaggta caggccatta ccatcgagaa
      181 ggcggtatgg tttttctttc ggctttgctg cttcaatctg cttaacggtg agcatgggta
      241 aaaatccggt gggtaaaatt attttatcca ctttttaccc gtcatggagt gcggctgtca
      301 acgatctgac gcgaaccatg acgaaccgtg aatatacgga aggcttgata ttcaggggat
      361 tttgcggact ggtacggatg ggagcgaact gataaatggt gtcccctgca ggaatcgaac
      421 ctgcaattag cccttaggag gggctcgtta tatccattta actaagagga caatgcggca
      481 tgagtatacc cgctaatgga ctgcggagta agtacactgc cgctcgattg cttaaaccct
      541 cgccatttat gctgggtttt tatcattttt cttaatgttt tccgcacgtt ctgctttttg
      601 gcgtgcttct gctttgcgct tgttgctcat gtcgttacgg atctgtgcat gactcattaa
      661 cgcgaagata aaggtgccgc cgcagatatt ccccgctaaa gtaggtagtg cgaagggcca
      721 aatgaaatcg ctccagtgca gcgtgccgtt aaacaccaga tagaggattt ctacagaacc
      781 gacaacgatg tgggtggtgt cacccagtgc aataagccag gtcatcaata taatcaccac
      841 aatctttgcc gcacccgctg caggaaacat ccaaaccata gtggcgatca gccagccgga
      901 aatgatcgcg ttggcaaaca tctcgctggg ggtgttcttc atcacatcca tgccgatttt
      961 gacaaatgca tcgtgagttt cttcattgaa gataggcata tattcaaatg cccatgcagc
     1021 aatacctgtc ccgagaatat tacccagcag cacgacgccc cataatcgca taagtaagcc
     1081 gacgttgctc attgtcggtt tttgcatgac gggtagtacc gcagtcacgg tgttttcggt
     1141 aaataattgc tggcgggcca taatgacgat aataaaacca aaggtataac cgagattctc
     1201 caacaagaag ctgcccggca cgccttccag ttcgacatga aatatccctt ttgccagtaa
     1261 cgaagcgccc atcgacagac ccgccgcaat ggctgaccac agtagtgcca ttgcgtcgcg
     1321 ttccagctct ttttcaccat cctggcggat atgttcatga attgccatcg cccgggaggg
     1381 gagtcgatct tcatctattt ctattttttt gccgcgctct ttttcttcgc tctcaacttc
     1441 aatttcgtcg ctgtgttgat caattttgtc gttgtccatg gtctcttctc ttgaattagc
     1501 acgtatagct aaagcgtagc ggcttttttg ctcgcaactg gcgggagtta ctctgaaaat
     1561 gtagaaaagg ccgcgtttgc ctttttctgt ttctatagaa tcaagtagcc tacagggcgg
     1621 cgattaccag gctatgatca aatcagcaaa tcagggcgtc tggacatcag ttgacgtgct
     1681 gttacaatcg cccacaccta aacaggcgga tacggtatcg ttccgtcatg gatggcaaac
     1741 tgcataagcc ataaaaaaac agggagacat ttatgaagct tcgcctgtcg gcgcttgctc
     1801 tgggaactac gcttctggtg gggtgtgcga gttccggtac agatcagcaa gggcgttctg
     1861 acccgttaga agggttcaac cgcaccatgt acaacttcaa cttcaatgta ttagacccgt
     1921 atattgttcg accggtcgct gtcgcctggc gtgattatgt tccgcaaccg gcgcgtaacg
     1981 gtttgagcaa ctttaccggc aaccttgaag aacctgcggt gatggttaac tacttcttgc
     2041 agggcgaccc ttatcagggg atggtccact ttacccgctt tttcctgaac accattttgg
     2101 ggatgggcgg ctttattgat gttgcaggga tggcgaaccc gaaactgcaa cggactgaac
     2161 ctcaccgctt cggtagtacg cttggtcatt atggcgtggg ttatgggcct tacgttcagt
     2221 taccgttcta cggtagcttc acgctgcgtg atgacggtgg tgatatggca gatggtcttt
     2281 acccggttct ttcctggctg acctggccga tgtctgtggg taaatggacg cttgaaggga
     2341 tcgaaacccg cgctcagctg ctggattccg atggtctgct gcgtcagtcg tccgatcctt
     2401 atattatggt gcgcgaagcg tacttccagc gtcatgattt catcgctaat ggcggcgaac
     2461 tcaaaccgca ggaaaatccg aacgcacaag cgattcagga tgatttaaaa gatattgatt
     2521 ctgaataaga aacaaataaa aaaggtgagt cgcaaaactc accttttttg ttgttatccc
     2581 tcaattacca caagtaaaag gagataaacc gacaatgacc cggacgtaat gatgtaaaaa
     2641 tactgatgtt cgtcactgac tatttccgat attcaggcgt tgaaaaatca aaaaactgga
     2701 aaaataattt taaatatcat caaaattaac acctggcgca gatagttgat taatttcatt
     2761 ttgatattcc gtctggcgat tttgaagcct tttttcaact ttatcttcga gatccttaaa
     2821 gtctttgtat ttattttcag gatggtcaac gtcaactttg ttagcgaata aagtagaaat
     2881 tatttctttt acattatcgc gtctaaattt tgcatcgtcc acttgaaaat tatatcttat
     2941 tgctcgacct aaacgtttaa aaacttcgtt aggttctctc agtctttccc cgttgagctc
     3001 gtttacaacc tgatgatcgg aacctgttgc aaatgattct gccatgatag ctttactgct
     3061 ttcaaac
//
LOCUS       DADMIB010000286         3030 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.294, whole genome shotgun sequence.
ACCESSION   DADMIB010000286 DADMIB010000000
VERSION     DADMIB010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.294"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..465)
                     /gene="virK"
                     /locus_tag="JNZ89_004358"
     CDS             complement(<1..465)
                     /gene="virK"
                     /locus_tag="JNZ89_004358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HAY8938011.1"
                     /translation="MFSVSNLSFIGFLKRIVFSSDSLPGKWEHRKFRFMYILRCAINP
                     VASIRYYYELRSLPCIEDILAIHPTLPARIHRPYLHKGGRAWTRGQYILEHYRFVQNL
                     PEKYSKFLFPQKSVSLVQFIGKDGENFDIQCSSSGFDREGELMLSLFYNKTVI"
     gene            complement(470..1558)
                     /gene="capU"
                     /locus_tag="JNZ89_004359"
     CDS             complement(470..1558)
                     /gene="capU"
                     /locus_tag="JNZ89_004359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
                     /protein_id="HAY8938012.1"
                     /translation="MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIA
                     FEASKLGIDITFALFRNSLHIPTAWRLLGIVHGFQPNAIVCHSGHDSNIVGLVRLFTW
                     KHPFRIIRQKTYLTQKTKVFSINHFCDEVIVPGTSMKTHLEQEGCRTRVTVVPPGFDF
                     QKLYVDSRNSLPPNVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHLKMNGRQFC
                     WLIVGSGSPELREHLQYQIDSMGMHDDVFIADNVFPAAPVYRVASLVVLPSENESFGM
                     VLAEASAFSVPVLASQIGGIPDVIQNNQTGTLLPAGNKHAWMCALNDFFNDPGRFYQM
                     ARQAKQDIEERFDINKTALKILTLAKHK"
     gene            complement(1561..2403)
                     /locus_tag="JNZ89_004360"
     CDS             complement(1561..2403)
                     /locus_tag="JNZ89_004360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HAY8938013.1"
                     /translation="MLNEGGILFKANHVPVLMYHHVSHCPGLVTLSPVTFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLKEFNLKAHIFLIT
                     GFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSKHLCWPEGYYNKDYIQVAEELG
                     FYYLYTTERRMNAPAKGTTRIGRISTKERESCAWLKRRLFYYTTPFFSSLLAFHKGPR
                     LPDD"
     gene            complement(2767..2883)
                     /locus_tag="JNZ89_004361"
     CDS             complement(2767..2883)
                     /locus_tag="JNZ89_004361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004996477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY8938014.1"
                     /translation="MPGIPPEIRWNNQKNALQLWNKEGGVVRREGDPLEMAQ"
BASE COUNT          912 a          695 c          557 g          866 t
ORIGIN      
        1 aataactgtt ttattgtaaa acaatgacaa catcaactct ccttcccggt caaaaccact
       61 ggaagaacac tggatatcaa aattctctcc atctttcccg atgaattgga ctaatgatac
      121 cgatttttgt ggaaacaaaa atttagaata tttttctggc aaattttgca caaagcgata
      181 atgctcaaga atatattgtc cacgggtcca ggcgcgcccc cctttatgca aataagggcg
      241 atgaattctt gctggcaacg tggggtgtat tgccagaata tcctcaatgc acggcaagga
      301 acgcagttcg taataatatc gaatactggc aaccggattt atagcacatc gcaaaatgta
      361 catgaaccgg aattttctgt gttcccactt ccccgggagt gaatctgagg aaaaaacaat
      421 ccttttaagg aaaccgataa atgataagtt acttacagaa aacatattgt tacttgtgct
      481 tcgctaatgt gagtattttt aacgcagttt tattaatatc aaaccgctct tctatatcct
      541 gttttgcctg gcgagccatc tgataaaaac gcccagggtc attaaaaaaa tcattcaggg
      601 cgcacatcca tgcgtgctta ttacctgctg gtaacaatgt cccggtctgg ttgttctgaa
      661 taacatcagg gattccacca atctgactgg ccagtacagg cacagaaaat gccgatgctt
      721 ctgccagtac cataccaaac gattcgtttt ctgaaggcag aaccaccaga ctggcaaccc
      781 gatatacggg ggcggcagga aaaacattgt cagcaataaa aacatcatca tgcatgccca
      841 tactgtcaat ctgatactgt aaatgctccc gcagttcagg cgaaccagac cccacaatca
      901 accaacagaa ctgtcgtcca ttcattttta aatggaacag taaattcaac ataaattcgt
      961 gccctttttc cgggcgcaac attcctacct gagcaataac ggggcatccc cttcgggacg
     1021 ccagccaaga aagaacattt ggaggcaaac tgtttcggga atcaacgtat aatttctgga
     1081 aatcaaagcc tggaggcaca acagtaaccc gggttcgaca tccttcctgc tccagatgtg
     1141 tcttcatact tgttccggga acaatcacct catcgcaaaa atgatttatt gaaaaaactt
     1201 ttgttttttg tgtcaaatat gtcttttgcc tgataattct gaatggatgt ttccaagtga
     1261 ataaccgtac taaaccaaca atattgctat catgcccact gtgacaaacg attgcattgg
     1321 gctgaaaacc atgaactatt ccgagtaatc tccatgcagt agggatgtga agactgtttc
     1381 gaaataacgc gaatgtgata tcaattccca atttactggc ttcaaaagca attttgctgt
     1441 tttccctgca gacaagcaga actgaatgcc ccattttctt cagggccttc atttgagcaa
     1501 cagcctgtaa ttcctgacca cctatattcg gtgatgattc cgtaaatagt atattcatta
     1561 ttaatcatcc ggtaatcttg gccccttatg aaaggccagc aacgatgaaa aaaacggtgt
     1621 tgtataataa aaaagtcgtc ttttcagcca tgcgcaactt tcccgttctt tggtgcttat
     1681 tcttcctatc cgtgtagttc ctttagcagg agcattcatt cttctttctg ttgtatataa
     1741 ataatagaat ccaagttctt cagcgacctg aatataatcc ttgttataat aaccttccgg
     1801 ccaacacaaa tgtttactgc attttcctgt catttctttc aaatattctc tcccactcaa
     1861 caagtcctgc cgaagatgtt tacactgttc ttctcgtgaa ctgaactttt tatcccagcg
     1921 tgtatgagta tgcgtatgaa catgaaattc gaccagacca gattgcaaca tttcgtttac
     1981 ttcagaccag cgaagcataa cattatcagc attccctgtc gctatttgat gttcgcaatc
     2041 gcgatgagaa tattcctttc caggagagtg acgaaccgga ccattcccaa taaaaccggt
     2101 aattaaaaaa atatgtgctt tgagattaaa ctcttttaat aaaggatata cctgaaacca
     2161 gttgtcaagg tatccatcat caaatgtcaa cataacgctt ttccggggga gttttccgcc
     2221 ccgataaaaa aactccagtt catctgatga cagtgttttc cagttatttt cagccaacca
     2281 tttcatttgc ttccggaatg tcacgggaga aagtgtaacc agtccggggc aatgactgac
     2341 atgatgatac attaataccg gaacatgatt ggctttgaac aaaatgcccc cttcgtttaa
     2401 catttaaagt ttctggcacc tagtaagcag agacaaaagg aaaacccaat aaagctggtg
     2461 cattttattt ccagatactg gatgaataac atagcaaacc catggcatac ttgatatatt
     2521 ttactaaatt aaacatcaac aattcataaa caatgatata ttatcatatc ttttaaaaac
     2581 gactcactaa gaaccttgag gtggcacact gaatttggct acctgaacag aggtgatatg
     2641 ttcacctcag aacaacacag gtgctccaat gaaaaaaagg aatttcagcg cagagtttat
     2701 ttacggggtg acgctttcat taacctgtac acgaacttct attccggcat catgacaggc
     2761 ctgcagctac tgcgccattt ccagcggatc gccctcccgg cgtaccaccc caccttcttt
     2821 attccataac tgcagagcat ttttctgatt gttccatctg atttcggggg gtattccggg
     2881 caaggttgtt cagtaaggca ttccttcgta aaatcagcat gttttttgca cgacggaaac
     2941 cggcagccat gaaaatctgt ctttatcata ctctgaatcc tgacacgatc ccgggttata
     3001 aaaaatttgc acaggctatt gccaccgata
//
LOCUS       DADMIB010000287         2941 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.295, whole genome shotgun sequence.
ACCESSION   DADMIB010000287 DADMIB010000000
VERSION     DADMIB010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2941
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.295"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            576..1292
                     /locus_tag="JNZ89_004362"
     CDS             576..1292
                     /locus_tag="JNZ89_004362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938015.1"
                     /translation="MNDNSLLRNSSLFIAYMGCVGWVSAYSYGWGTSFYYGFPWWVVG
                     AGLDDVARSLLYAIIVMGILFTGWGIGILFFLLIKKRSKIQDLSFFRLFFAITLLFFP
                     VIFELLILKQYFILPLSLSCIISSLVISIIIRIYGRIFSVSCFSDIPFVREHRIKLIM
                     AGFLVYFWLFSFLVGWYKPQLKKEYQMLCYNNSWYYVLARYDSRLVLSSSFKDDSNRF
                     LIFNTEQSGFYEINDVYVRK"
     gene            1844..2248
                     /locus_tag="JNZ89_004363"
     CDS             1844..2248
                     /locus_tag="JNZ89_004363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938016.1"
                     /translation="MNTALIVALMCMWYAVPAAAKETLLAMPRNSTEHCYAEINVHGP
                     YGVYFRVVPHPPGGKSWVECNSDYYYSDKPPGVQILGTRAGCRVYGICGTTSTLHVAG
                     RGVVCIKNICSPRGMIIHRIRKRPVVAVSDEM"
     gene            2311..2610
                     /locus_tag="JNZ89_004364"
     CDS             2311..2610
                     /locus_tag="JNZ89_004364"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938017.1"
                     /translation="MTKTVSTSKKTRKQHSPEFCSEALKLAERIGVAAAARELSLYES
                     QLYAWRSKLQQQMTSSERESELAAENARLKRQLAVQAEELAILQKAATYFAKRLK"
     gene            2607..>2941
                     /locus_tag="JNZ89_004365"
     CDS             2607..>2941
                     /locus_tag="JNZ89_004365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938018.1"
                     /translation="MKYVFIEKHQAEFSIKAMCRALRVARSGWYTWCQRRTGISPRQQ
                     FRQHCDSVVLAAAFTRSKQRYGAPRLTDELRAQGYHFNVKTVAASLRRQGLRAKASRK
                     FSPVSYRAHG"
BASE COUNT          824 a          605 c          667 g          845 t
ORIGIN      
        1 tgtgggccat aaatattcca aaaaaatagc ccgctccgtt tattaccgga acgggcgaga
       61 gcatgacatt gtctgtaatt ataatgagac tgctgattct acttattttt aatttcaaga
      121 aaagcgtttt ctacaaagaa ttatgagatt taatgttttg tttagacaat attgtcattc
      181 tgttcaataa tgaaagtctt catcaacaac aagtaaaaac aacgtccctc tcatcgaacc
      241 ggacttgcag atttcccgca tccggctctc ttgcaacaca tcagaccttc acgttcgggc
      301 ggttatgggg aaggtccagc aagctgtatg agccctaact gtttgaatac cagtagatta
      361 ccagaaactt ctatcgattg aagacattac caactagcgt tactaaatgt tgaccaagtt
      421 ttgttcactt gtctggtttt gatagtagca ttctgcagag tattttgata tgataaatat
      481 gcattaacaa tgatattatt gttaatttcc tagcatgaaa attaaaagat caacttttta
      541 tctcgaatat tttttacatt atcagttggt ttcttatgaa tgacaattca ttgcttagaa
      601 attcttcatt attcatcgcc tatatgggat gtgtagggtg ggtcagtgct tattcttatg
      661 gctggggaac ctctttttac tatggatttc catggtgggt tgttggtgca ggtttggatg
      721 atgttgccag aagtttactc tatgctatca tagtaatggg tatacttttt accggttggg
      781 ggattggtat tttatttttt cttcttataa agaaaagaag taaaatacaa gacttgagtt
      841 tttttagact attttttgct attaccctac tgtttttccc tgtaatattc gaacttttaa
      901 ttctcaaaca atatttcata cttccattat cactttcatg cattattagt tcattggtta
      961 tttcaataat aattcgcata tatggacgga tcttttctgt atcatgtttt tcagatatcc
     1021 cttttgttag agaacaccgc attaagttaa ttatggctgg ttttttggtt tatttttggc
     1081 ttttttcctt tcttgttggc tggtataaac ctcaattaaa aaaagaatat cagatgcttt
     1141 gttataataa tagttggtat tatgttcttg ctcgttatga ttcacggctc gttttgtcta
     1201 gttcatttaa agatgacagt aacagattct taatatttaa tacagaacag tcgggatttt
     1261 atgaaatcaa tgatgtttat gtcagaaagt aataatcctc tcccacaaag tgaattaaac
     1321 gaatatataa tgcgttcgaa gtatatgtat tgagctgtca tactgagaaa caaaccttag
     1381 ggcagcacaa ttaaagccag aaacaactat gcaagaaagt tactaaataa gtgctcggaa
     1441 cagtaaaaca ctcagggggg actcagtcca gattatgtaa tcagataaat tgccaaacat
     1501 cacaaatcac cagcaggact gagtgatgcc gagcattgca ccaatacccc gtgatgaacg
     1561 atgcctgatg cagaaagctc cctataaaac aaagaacaaa aactacgacc ggcgattcac
     1621 cgtcatactg atgctgcatc gtggtgacac tgtctgtcac tttcatgttg actgaacaac
     1681 tctgctgcga agaaggtgta ccgccggcgg gatttgattg tccggcgtct agcttccact
     1741 tccctgatgg aactgaaagt tgttatggcc ggtcagcttg ccctgtccgc aggacatgag
     1801 gtgctgtgac ggacagcacc agtaacggaa agtgacaata aaaatgaata ctgcgctgat
     1861 agttgcacta atgtgtatgt ggtatgcggt acccgctgct gcaaaagaga ctttactggc
     1921 tatgccacgt aattcaacag aacattgcta tgcggagatt aatgtgcacg gaccatatgg
     1981 ggtgtatttc cgagtggtcc cgcatccccc cgggggaaag agctgggtcg aatgtaacag
     2041 tgactactat tactctgata aaccaccggg agtacagata ctcggaaccc gtgcagggtg
     2101 tcgggtatac ggaatctgcg ggaccacctc gacactgcat gtggctggaa gaggggttgt
     2161 gtgtattaaa aatatatgca gtccacgtgg gatgataatt cacaggatac ggaaacgtcc
     2221 tgtagtggct gtaagcgatg agatgtgatc ttatccagca atagtggaca cgcggctaag
     2281 tgagtaaact ctcagtcaga ggtgactcac atgacaaaaa cagtatcaac cagcaaaaaa
     2341 acacgtaaac agcattcgcc tgaattttgc agtgaagccc tgaagcttgc tgaacgcatc
     2401 ggtgttgctg ccgcagcccg tgaactcagc ctgtatgaat ctcagctcta tgcgtggcgc
     2461 agcaaactgc agcaacagat gacctcgtct gagcgtgaaa gtgaactggc cgctgaaaat
     2521 gcccgcctga agcggcaact ggcggtgcag gcagaggaac tggctatcct ccaaaaggcc
     2581 gcgacatact ttgcgaagcg cctgaaatga agtatgtctt tattgaaaaa catcaggctg
     2641 agttcagcat caaggcaatg tgccgcgcgc tccgggtggc ccgcagcggc tggtatacgt
     2701 ggtgtcagcg gcggacaggg ataagccctc gtcagcagtt ccgtcagcac tgcgacagcg
     2761 ttgtcctcgc ggcggccttt acccggtcaa aacagcgtta cggtgcacca cgcctgacgg
     2821 atgaactgcg tgctcagggt taccacttta acgtaaaaac cgtggcggca agcctgcgcc
     2881 gtcaggggct gagggcaaag gcctcccgga agttcagccc ggtcagttac cgcgcacatg
     2941 g
//
LOCUS       DADMIB010000288         2923 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.296, whole genome shotgun sequence.
ACCESSION   DADMIB010000288 DADMIB010000000
VERSION     DADMIB010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.296"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..275
                     /locus_tag="JNZ89_004366"
     CDS             <1..275
                     /locus_tag="JNZ89_004366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001600920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938019.1"
                     /translation="YEGEQLYLNELGYVYGNEEKTNEIVNNNPGYVVEIFEEKMGNEL
                     KIRTRMMEILRDGKINICEYINKEQLEKLNPPEDLRIAIKKLGWNN"
     gene            complement(347..1351)
                     /gene="argF"
                     /locus_tag="JNZ89_004367"
     CDS             complement(347..1351)
                     /gene="argF"
                     /locus_tag="JNZ89_004367"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HAY8938020.1"
                     /translation="MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLT
                     GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD
                     GIQYRGYGQEIAETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
                     YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED
                     VAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLP
                     AFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
                     "
     gene            1513..1929
                     /gene="rraB"
                     /locus_tag="JNZ89_004368"
     CDS             1513..1929
                     /gene="rraB"
                     /locus_tag="JNZ89_004368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HAY8938021.1"
                     /translation="MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLE
                     TLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAE
                     KFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH"
     gene            complement(1975..2477)
                     /locus_tag="JNZ89_004369"
                     /pseudo
     CDS             complement(1975..2477)
                     /locus_tag="JNZ89_004369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026287.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            2670..2888
                     /locus_tag="JNZ89_004370"
     CDS             2670..2888
                     /locus_tag="JNZ89_004370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001382678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HAY8938022.1"
                     /translation="MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLP
                     WALMKCKRYLYANMEVNGQRFSVMLPTY"
BASE COUNT          803 a          641 c          674 g          805 t
ORIGIN      
        1 agtatgaggg cgaacagctg tatcttaatg agttaggata tgtttatggt aatgaagaaa
       61 aaacaaatga aattgtaaat aacaatccgg gttatgtcgt tgagattttt gaagaaaaga
      121 tgggtaatga attaaaaatt agaacaagaa tgatggaaat cctccgggat gggaaaataa
      181 atatatgtga atatattaat aaagaacagt tagaaaaatt aaatcctccg gaagatttac
      241 gtatagcaat aaaaaaattg gggtggaata attgaactat tactgcataa aataatgtga
      301 tgccgggatg tttttgtatt tcccggcatc tttattgcga tatcaattat ttactgagcg
      361 tcgcgaccat caccgctttg atggtatgca tgcggttttc cgcctgatca aaaacaatgc
      421 tggcggcaga ttcgaagacc tcatcagtca cttccattcc gccatgtagg ccaaactctt
      481 ccgccatttt cttaccaagc gtcgtctggt cgtcatgaaa cgcgggcagg cagtggagga
      541 atttgacctc cgggttaccg gtcaactgca tcatcttgct gttcacctga taatcacgca
      601 gtaatgcaat ccgttctgcc catttctctt ttgcttcccc catcgacacc catacatcgg
      661 tatagataaa gtcagcacct tcaactcctt tggctacatc ttccgtcagc gtaatattcc
      721 cgccattttg ctgtgccaag gcgcggcatt ccgtaaccag cgcagcttcc ggccagcatg
      781 cctgtggcgc gaccagacgc aaatccagac cggtaagcgc cgcagcttcg agcatcgaat
      841 tgcccatgtt gttacgtgcg tcacctgcat agaccagcgt catttcgttg aatgctttac
      901 cgggtaaatg ctcctgcatg gtgaggagat ccgccagcaa ctgcgtgggg tgaaactcat
      961 tggtcaggcc gttccatacc ggcacgccag cgtattccgc cagtgtttcg gcaatctcct
     1021 gaccatagcc gcgatactga ataccgtcat acatgcgacc cagcacgcgg gcagtgtctt
     1081 taatcgactc tttatgacca atctgactgc cgcttgggcc gagataagta acgcgagcac
     1141 cctggtcata tgcggcaact tcgaaagagc atcgggtacg ggtcgagtct ttttcgaaga
     1201 tgagcgcgat gtttttacca gtgagtttgg cttcttcttt gccgcttttc ttatcggctt
     1261 tcagcttcgc ggctaactgc agcaggctgt tgagttcagc tggcgtgaaa tcgagtaatt
     1321 tcaggaaatg cttatgataa aacccggaca tagatccctc ctgtggctaa cgcctcaatg
     1381 aattaaaatt caatttatat ggatgattat tcatttgcaa gtctaaagca taaatctttg
     1441 tcacaaaggt ggaggcaatg tcagtggtat gtgacaataa gagtatcggc aggacattaa
     1501 gaggaatgag ccatggcaaa cccggaacaa ctggaagaac agcgtgaaga aactcgtttg
     1561 attattgaag aattactgga agatggcagc gatccggacg cgctgtacac catcgaacac
     1621 catctttccg cagacgatct ggaaaccctg gaaaaagcag cagttgaagc gtttaaactc
     1681 ggttacgaag tgaccgatcc agaagagctg gaagttgaag atggtgatat cgtgatttgc
     1741 tgcgacatcc tcagcgagtg cgcgttgaat gccgatctga tcgatgccca ggttgaacaa
     1801 ctgatgacat tggcggagaa atttgacgtt gagtacgacg gttggggcac ttattttgaa
     1861 gatcctaatg gcgaagacgg cgacgatgaa gattttgtcg atgaagacga tgacggggtt
     1921 cgccactaat taattgatta aaatgcccga tagcacacac tagcgggcat ttttttagag
     1981 ttcgcgcaac atccgcactt cacaatcaac atggcccgtg cagccaagtg catagtcgat
     2041 atgctcaaag cccaaatgct cataaagcgc aatggcttcc tttaaaaagc ggtcgtttcc
     2101 agatagcagc gtttgaagcc catctctcgt gcctgctcca tcgccattaa ggccagtttt
     2161 ttcgccagcc ctttaccgcg aatagccgga agaaaataca tcttttgcag ttcgcaaatg
     2221 tccgattcac tacctgctaa tggcgcaatc ccaccgccgc cgaccacttc accctcgtac
     2281 tcaaccaccc aatatgcatg acccggctga ctatacactt gatacagttc gtcaagattc
     2341 ggatcggcga cggtgtagcc tttatcagcg gtaagaccgt attcggcgga tacctgacga
     2401 atgacgcggg caatagcagg attatcctgt agcgtcaggc gacgcattac aggtgattgc
     2461 ggcgcaatgt tattcatagt ttaacccaat aaaaataaag taattataca tttgtttaat
     2521 accactctct tcttacgtgc gcaagcatct tataaagcaa taaagttttt gccagcctat
     2581 tactgataag agtattgtaa cgtggcagaa cattttactg tctgtatata taaattatat
     2641 caatggattt tttaattcag ggaattttta tggctcaagt tattaatgaa atggatgttc
     2701 cgtcccattc gtttgttttt catggtacag gtgagagata ttttcttatt tgtgtggtga
     2761 atgtgttgtt aacgattata acgctaggta tctatttacc atgggcatta atgaaatgta
     2821 agcgttatct ctatgctaat atggaagtta acggacaacg attttcggta atgctgccaa
     2881 cttactgatt tagtgtatga tggtgatttt aaggtgcttg cgt
//
LOCUS       DADMIB010000289         2918 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.297, whole genome shotgun sequence.
ACCESSION   DADMIB010000289 DADMIB010000000
VERSION     DADMIB010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.297"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..1322
                     /locus_tag="JNZ89_004371"
     CDS             <1..1322
                     /locus_tag="JNZ89_004371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415419.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY8938023.1"
                     /translation="LVVVFSWVFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTM
                     GPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKSDGSLIKEYSVVALQGLTLVLF
                     IFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFI
                     PHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSL
                     AMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSID
                     APLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVQVAILIMLPTLGIGDMNNLYK
                     WLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFA
                     CLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLGLIFPLLARKANSK"
     gene            complement(1323..2231)
                     /locus_tag="JNZ89_004372"
     CDS             complement(1323..2231)
                     /locus_tag="JNZ89_004372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY8938024.1"
                     /translation="MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQR
                     LKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINDARV
                     AARIFLMPLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSGIVEKDMISVAIG
                     PPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNI
                     ILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLGDWSTERPGFQIYYPNRQY
                     MSCGLRAFLDYVKTGQISQSQRHRPQ"
     gene            2331..>2918
                     /locus_tag="JNZ89_004373"
     CDS             2331..>2918
                     /locus_tag="JNZ89_004373"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H oxidoreductase"
                     /protein_id="HAY8938025.1"
                     /translation="MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYR
                     RNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYI
                     DRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIED
                     ADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL"
BASE COUNT          739 a          621 c          727 g          831 t
ORIGIN      
        1 ggctggtggt tgttttttca tgggtgttta tctttgcgct ctatttcaca ccttatgcgc
       61 taattgttgg tcagttaggc tcgaccttca aagatgggaa gggcggggtc agtacctgga
      121 ttaaacacac gatgggaccc ggactggctt atctcgccgc gtggacctac tgggtggtgc
      181 atattcccta tctggcacaa aaaccccagg caattctgat tgcgctcggt tgggcgatga
      241 aaagcgacgg ttcgctaatc aaagaatatt cagtcgtagc gttacagggg ttaacgctgg
      301 tgctgtttat cttctttatg tgggttgctt cacgcggtat gaaatcgctg aaaatcgtcg
      361 gttctgtggc agggattgcg atgtttgtta tgtcgctcct gtatgtggcg atggcggtaa
      421 ccgcgcctgc gattactgaa gtgcatattg cgaccacaaa cattacctgg gaaacgttca
      481 ttcctcatat cgactttacc tacattacca ctatttcaat gctggttttc gcggttggcg
      541 gagcagagaa gatttctcct tacgttaatc aaacgcgcaa cccaggaaaa gaatttccaa
      601 aagggatgtt atgcctggcg gtgatggttg cggtttgtgc cattctgggc tcactggcga
      661 tggggatgat gtttgactcg cgtaatatcc cggatgactt aatgactaac ggtcaatatt
      721 acgcctttca gaagctgggc gagtattaca acatgggtaa tactttaatg gtgatttacg
      781 ccattgcgaa taccctggga caagtagctg cgttggtatt ctcgattgat gccccgctta
      841 aagtgctatt aggtgatgct gacagcaaat atattccagc cagtttatgt cgtaccaacg
      901 cttctggtac gcccgttaat ggctattttc tgaccctggt gcaggtggca attctgatta
      961 tgctgccgac tctcggcatc ggtgatatga acaatctcta taaatggctg ttgaatctta
     1021 actcggtagt gatgccgctg cgttatttat gggtatttgt tgcatttatt gcagtcgttc
     1081 gcctggcgca gaaatataaa ccagaatatg tctttattcg taataagcct ctggcaatga
     1141 ccgtcgggat ttggtgtttt gcctttaccg cctttgcctg tttgacgggg atcttcccga
     1201 aaatggaagc cttcactgca gagtggacct tccagttggc gctgaatgtt gcaacgccgt
     1261 ttgtgctggt aggattagga ctgattttcc cgctgctggc gcgtaaagcg aatagtaaat
     1321 aattattgtg gtcggtgacg ctgactctgg ctgatctgac ccgtttttac ataatcgaga
     1381 aatgcgcgca agccgcagga catatactgg cggtttggat aatagatctg gaagcctgga
     1441 cgctctgtgc tccagtctcc cagtacacat tctaaacgac cagtatcaag gtactccttg
     1501 atctgttcat agagcagata cccgatacca gcacccatca aaacggcctc cagttcagca
     1561 tcaacatcat ccagaatgat atttcctgcg acagcaattt ccagctcctt tgcaaattgc
     1621 cagtggaaag gtttgccgct gggataacga aaaacaacac attgatgatt aagcagatca
     1681 tgaggatggc ggggtttgcc atatcttgca aagtactctg gcgttgctgc tacacataat
     1741 ttcactggcg ggccgatcgc cacgctgatc atatcttttt cgacgatgcc actaagtcga
     1801 acgccagcgt caaagccctg ttggacgata tcgacaagag agtcgtcagt tgtgagctcg
     1861 actttaatat caggatattc acgtgtgaaa ccaaccagta aaggcattaa aaatatacgt
     1921 gcagctaccc gggcgtcatt gattttgagc gttcctgtcg gtgtcagacg aaaatcattc
     1981 atctcatcta acatgatctg aatttcgtcg aaagctgggc gcaatcgttc atagagatta
     2041 gaacccgctt ccgttaacga tacgcttcgg gttgtccgat tgaataagcg aattttaaga
     2101 cgttgttcca gtgttttaat actatggcta atggcggacg aggataagcc taactcatcg
     2161 cccgctgcac gaaagctttg attacgggcc acggcaaaga aagtggcaaa gtcagacata
     2221 ttcatccgca ttagtgaaaa tccttcatta actcatcctg aatcatcacg tttacaggat
     2281 tatgccgcct gcgtaaagtg cgctccagaa cttaacgtgg aggtaaaatt atgcagtctg
     2341 aacgtattta tttggtatgg gcccatcctc gtcatgattc attgaccgca catattgctg
     2401 atgcgatcca tcagcgggca atggagcgga aaatacaggt gacggaactc gatttatatc
     2461 ggcgtaattt caacccagtg atgacgccgg aagatgaacc agactggaag aatatggata
     2521 aacgttattc tccagaggtt catcagcttt attcagagct gcttgaacat gacacgttag
     2581 tggtggtttt tcctctctgg tggtacagct tcccggcaat gctaaaagga tatattgaca
     2641 gagtatggaa taatgggctg gcttatggag atgggcacaa attaccattc aataaagttc
     2701 gttgggtggc gctggttgga ggagacaaag aatcatttgt ccagatgggc tgggaaaaaa
     2761 atataagcga ttatttgaaa aatatgtgca gttatcttgg tattgaagat gccgatgtca
     2821 ctttcttgtg taatacagtg gtattcgatg gggaagaact tcatgcgagc tattatcagt
     2881 cgttattatc tcaggtacgg gatatggtag atgcacta
//
LOCUS       DADMIB010000290         2830 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.298, whole genome shotgun sequence.
ACCESSION   DADMIB010000290 DADMIB010000000
VERSION     DADMIB010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.298"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..134
                     /locus_tag="JNZ89_004374"
                     /pseudo
     CDS             1..134
                     /locus_tag="JNZ89_004374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309413.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
     gene            384..1250
                     /gene="ospB"
                     /locus_tag="JNZ89_004375"
     CDS             384..1250
                     /gene="ospB"
                     /locus_tag="JNZ89_004375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspB"
                     /protein_id="HAY8938026.1"
                     /translation="MNLDGVRPYCRTVNKKNESISDIAFAHIIKRVKNSSCTHPKAAL
                     VFLGEKGFCDSNDVLSIMGQQIPRVFKNKMLYDYVFKNEKSKNDFLKMAESWLPQSEP
                     IVINNDDDALNAAAYFSVKKAKIKTVNDTDFKEYNKVYILGHGSPGSHQLGLGSELID
                     VQTIISRMKDCGILNVKDIRFTSCGSADKVAPKNFNNAPAESLSCILNSLPFFKEKES
                     LLEQIKKHLENDESLSDGLKISGYHGYGVHYGQELFPYSHYRSTSIPADPEHTVKRSS
                     QKKTFIINKELD"
     gene            1580..2320
                     /locus_tag="JNZ89_004376"
     CDS             1580..2320
                     /locus_tag="JNZ89_004376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HAY8938027.1"
                     /translation="MKTKNFLLFCIATNMIFIPSANALKAEGFLTQQTSPDSLSILPP
                     PPAEDSVVFQADKAHYEFGRSLRDANRVRLASEDAYYENFGLAFSDAYGMDISRENTP
                     ILYQLLTQVLQDSHDYAVRNAKEYYKRVRPFVIYKDATCTPDKDENMAITGSYPSGHA
                     SFGWAVALILAEINPQRKAEILRRGYEFGESRVICGAHWQSDVEAGRLMGASVVAVLH
                     NTPEFTKSLSEAKKEFEELNTPTNELTP"
     gene            complement(2680..>2830)
                     /locus_tag="JNZ89_004377"
     CDS             complement(2680..>2830)
                     /locus_tag="JNZ89_004377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T3SS effector OspC family protein"
                     /protein_id="HAY8938028.1"
                     /translation="FINNGLVDVNKKFQKANSGDTMLDNAMKSKDSKMIDFFIKKWSG
                     IRQTI"
BASE COUNT          927 a          516 c          525 g          862 t
ORIGIN      
        1 cggtaagaga agttcatcat acttggcgca gttacgcgat gtttctgcta gaggtgatgc
       61 cgtaaagaac ggcagaacat taccggaaca agatagcggt ctacctgcac tggtatcaga
      121 cccggggctt ccccggatga tctccacggt actttaggta ctgtgtctat attatgtagg
      181 taggatcaat taactttgta gttgaaattc tttcattgaa ataatgaata aaaaagacaa
      241 accgcattaa acaatgccag aatataattg catttttgtt ccgttttttt aaatcatagt
      301 atacaaagaa gcttgcatac tatatgaaaa tataacaccc tttactatga tgtttataaa
      361 acaatatatg gagtcatgta ggtatgaatt tagatggtgt tagaccatac tgtagaacag
      421 tcaataaaaa gaatgaaagc atatcagata ttgcatttgc acatataata aaaagggtaa
      481 aaaattcatc atgtactcac ccaaaagcag cattggtttt tttaggagag aaaggttttt
      541 gtgatagcaa tgatgttcta tctattatgg gacaacaaat accaagagta tttaagaaca
      601 agatgttata tgattatgtt tttaaaaatg aaaaaagtaa aaatgatttt ctaaaaatgg
      661 ctgaatcatg gctaccacag agtgaaccaa tagtaataaa taatgatgat gacgcattga
      721 atgctgctgc ttatttttct gtaaaaaaag cgaaaataaa aacagtaaac gatactgatt
      781 ttaaagagta taataaggtt tatattcttg ggcacggtag tcctggttct catcaattag
      841 gccttggttc ggaacttatt gatgtacaaa caatcatttc aagaatgaaa gactgtggta
      901 ttctaaatgt gaaagatatc cgttttactt catgcggctc cgctgataaa gtggctccta
      961 aaaattttaa caatgcccct gctgaaagtc tttcttgtat ccttaactct ctgccttttt
     1021 ttaaggaaaa agaatctttg ctagagcaga taaaaaaaca ccttgaaaac gatgagtcat
     1081 tgagtgatgg tctaaaaata tccggctatc atggatatgg agttcactat ggtcaagagc
     1141 tttttcccta ctcacattat cgttcaactt caattcctgc tgatccggag catacagtaa
     1201 aaagaagctc tcagaaaaag acttttatta ttaataaaga actggattag tataaaattt
     1261 ttaacctata gttaattgtt tgcatttaag atgaagttat ttttttcttt agtagaaaag
     1321 tgcttcccta tgagggaaaa tcacaaatca tcataataca gagacaaaac gatacgaaca
     1381 aatagataaa aaacatcatt cttttactac attatttttc gtgaatatga aaaataatgt
     1441 tattacttta atataagact attttttgtt tttccatcac tctgttcaaa tttttccgca
     1501 tgacttgtgt tttttgtaac acagctcgtt ttttacagct gaccaaaatc atcaattaat
     1561 tatgctaagg aaataaatta tgaaaaccaa aaactttctt cttttttgta ttgctacaaa
     1621 tatgattttt atcccctcag caaatgctct gaaggcagaa ggttttctca ctcaacaaac
     1681 ttcaccagac agtttgtcaa tacttccgcc gcctccggca gaggattcag tagtatttca
     1741 ggctgacaaa gctcattatg aattcggccg ctcgctccgg gatgctaatc gtgtacgtct
     1801 cgctagcgaa gatgcatact acgagaattt tggtcttgca ttttcagatg cttatggcat
     1861 ggatatttca agggaaaata ccccaatctt atatcagttg ttaacacaag tactacagga
     1921 tagccatgat tacgccgtgc gtaacgccaa agaatattat aaaagagttc gtccattcgt
     1981 tatttataaa gacgcaacct gtacacctga taaagatgag aacatggcta tcactggctc
     2041 ttatccctct ggtcatgcat cctttggttg ggcagtagca ctgatacttg cggagattaa
     2101 tcctcaacgt aaagcggaaa tacttcgacg tggatatgag tttggagaaa gtcgggtcat
     2161 ctgcggtgcg cattggcaaa gcgatgtaga ggctgggcgt ttaatgggag catcggttgt
     2221 tgcagtactt cataatacac ctgaatttac caaaagcctt agcgaagcca aaaaagagtt
     2281 tgaagaatta aatactccta ccaatgaact gaccccataa agctggacag cctgtatcag
     2341 gctatggagg gcccatagac aaatctaccc tatatgagca taggaggagc ctatgggcac
     2401 accacgtttt acccctgaat ttaagggatt actggaaagg ctgggacata tccctccggc
     2461 agaagcagaa aaagcttatt atgctgccat cggaaacgat gatctggcaa cctgagttca
     2521 cagataaaac attctctagg aaactcgggg cggttccgtt caccacatgc aatgtggtgt
     2581 tgcaggggaa cggtctgcac catcccctat gtcgatcaat ataacagaaa tgacaacttc
     2641 agattcaggg cacaacctaa atatatttta ggtcacctct caaatcgttt gcctgatacc
     2701 gctccatttt ttaataaaaa aatcaatcat ttttgaatct ttgcttttca ttgcattgtc
     2761 aagcatagtg tccccactat ttgctttttg aaattttttg tttacatcaa ccaatccatt
     2821 attgataaaa
//
LOCUS       DADMIB010000291         2792 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.299, whole genome shotgun sequence.
ACCESSION   DADMIB010000291 DADMIB010000000
VERSION     DADMIB010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.299"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(34..2707)
                     /locus_tag="JNZ89_004378"
                     /pseudo
     CDS             complement(34..2707)
                     /locus_tag="JNZ89_004378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001368649.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT          653 a          699 c          675 g          765 t
ORIGIN      
        1 gctgcttaaa aaaagaacaa atggtagtgt ccgctattgc cagtacacct cattcacata
       61 gacattcagc tggctgttgc ctgcggtgat gtcatacccc agtatcatgc tggcacgccc
      121 cagcagcgat tcgtagtgat tcagatgtat attgaggcca ttactcgcct tcatagccat
      181 ctcattctgg tggctgtatg taagctgggt ttgcggctct atatagaacc cataaccagt
      241 aggggacagg ttgaacctct gcccggcttc tagggagatg ctcattccat tcgcagtgcc
      301 gttggcgtta acgccgttgt tatgactgtc cagtacgtgg aaactatttt tctggcgcga
      361 tgcttttata acgagatcgc tgtaaaaacc gttttgtgcc atgtaactgg cgtacattcc
      421 catgtagtct gaacgtgcgg taccgtcgcc tccgctatag tccggcgatg catgtgttga
      481 gccaatatac agaccgacat acaacggcat ttcatcagag agacgtttat ccccaccaaa
      541 ctggataccg ctgtaaccca tgtcaaagcc gctcagtttg ccactggcaa aggagtccag
      601 gcttccccca taactgcgca accagatatt accgtcttta ctctgatttc gcaggtcacc
      661 catccgttgc atcagcgtac ggttttcaac atagttcaat aagtaaccga cattgagata
      721 attgccgcca gcatctgcgg tcgtggtggg tttaggcgtg ggagcgggtt caggcgtagg
      781 atcggggttg actatgggag gctgagcggg agctggtgtg ggttcaggat taggagtcgg
      841 ttccggaact gtcccggaag cgtaaagctc ccagttagtg ccatttttac gcacatcgta
      901 cagatatccc ccccaactca acctgagaag acgcgctgaa cgaggccgcg ccgtcagtgg
      961 tttttaccac tgtcagaact tcatttcccg ttgtggcctc gctgccctgg ttgcggatag
     1021 ccaatacgtg attaccagca ctactcccgc tgatattcaa taaatcccct ttattattaa
     1081 cgccattacc ctcgccaaca acatcagcac gcataataaa ggtactgtta ccgctcaggt
     1141 tctctacgtt taatgtggca aatgtgccgg cagttgaccc gtggctggca aaatcgacag
     1201 ttgaatggct cagcgccagc gtgtcgagat tagaattact tgttacgttc cagacgctgt
     1261 tattcattgc aacgtccagt tttccgccat tgacattatc gctgagggag gaacctgtcc
     1321 aaaccgaccc agggtgcata tccagattga ttagcccacc tttggaaaaa atgctaccgt
     1381 tgataagcat acgacccgag gcgttgatgc ggctggcggc ataaccatcg tcatgttgcg
     1441 ttgcaatggc catcttgtcg ggtgtactca tatcaatgac cagatcgctc gtgaggtcga
     1501 tctggctgtt ggtcatggca taaattcccc tggctcctgc cgcgccggtg atagccaaac
     1561 tgtctccggt tattctaccg ccgctgagcg cccacaaacc cagcgccaga ctgccattac
     1621 gatcaactgt aatatcggta ttttgcatgt tgacaacagc cgttgccgtc tgggccgagg
     1681 caccataaga accgccggaa aagatgctgt ttcgttgcgc tgccgtgcca gaaaaattga
     1741 ttgtcgcgtc tgaaccactg gtgacgaggc caccgccctg cgcggaagaa atatggctat
     1801 ctgcaccgat agtggttgta ccaccacgaa cttcgacgcc attggccgcg gctccagtta
     1861 catcaacagt gagtgcattc gcgctaacct ggccaaagct ccagaggccg tgtgcattat
     1921 cgccattggt tttaatggaa ctgtttgttc cgagatcgac aacagagttt ttctgtacgt
     1981 ttatccccat ggcgctgtag ccctgaacat cgattgtcag gtctgtagcc gtaaaacgcg
     2041 cagcaccatt ggcgttattg ccgttgagac caccgatata aacacctgta cttccatcgg
     2101 tcgtgatttt acttccgctt ccaagatcga cactggtgcc atagtcattg atggttaggc
     2161 ctataccgtt cgagttttca atggtgaatt gagtggctgt tagtgttgag ctatgcccaa
     2221 taatgatgcc gtcatcgtta ctcttaatgg tgctgcctgt gcctaagtca gcatgggtat
     2281 agtcaccaat taagttaatg ccgatggcag aggtttgacc aacaacatct actgtgagtc
     2341 ggttagctgt cagggagctg tttttgccct gaataatgat tccttttgca tatccagagg
     2401 cgtcgttgac attgacggtg acatcattac ccaggttgat attgccaggc gtgtttcctg
     2461 ctggggtcat tacaccatag aggtttcctg atggatcggc ggtatctcct gtaattctgt
     2521 caccatcatt aatagtaata ttggtgccat attgacttcc tgtatcagca gctatcagca
     2581 ggggggaaaa gataattgca ttcaaaccaa tagcgccaaa ttttatcagt tgaattgagg
     2641 gcgaacggat ttttaattca gcgagacgat ctgctttggt attcccattg tgttgtttga
     2701 tgcccatacc actcctatat agtacccaga ctatgggtct atggattttg tcattttgtt
     2761 taaatcaatg aataatatcc tcttatcatc at
//
LOCUS       DADMIB010000292         2783 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.300, whole genome shotgun sequence.
ACCESSION   DADMIB010000292 DADMIB010000000
VERSION     DADMIB010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.300"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..579
                     /locus_tag="JNZ89_004379"
     CDS             <1..579
                     /locus_tag="JNZ89_004379"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938029.1"
                     /translation="KKNNVPMIQNNGNLQPFSMGNLPSIAKTFPMEIHTTILQQLNPL
                     EHISNAISRICYYKEQCKALELESLKIKEQASFMHLKIDTNFKKAMYELETRRKSNEL
                     KLIAAANDFKQISITKSDLIKEISKLVSSICSNDVSLESKKAMNDTLIIMKGMLSDQR
                     SESYEKFKSLLSSIDSSYNDALLIEDHQDNYV"
     gene            572..1153
                     /locus_tag="JNZ89_004380"
     CDS             572..1153
                     /locus_tag="JNZ89_004380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938030.1"
                     /translation="MFNIILGVAAVGVGLYILNELDDRAGEEKKRWENQRESVCKSIE
                     EHKRYIEQHVEYVQSMYDFHQLVDLHYSCMKVANEAYKLLNDAKKSMGAIYDAINKLK
                     AHRSKLFNDKKESDDYEKKKEIQAEINMIKEIIDGLYSELDLIKKDKEHFYQELKAFN
                     LKTSSIKYRIRDNTGYKGFDWYNRLQERTLLRR"
     gene            2133..2609
                     /locus_tag="JNZ89_004381"
     CDS             2133..2609
                     /locus_tag="JNZ89_004381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000469298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8938031.1"
                     /translation="MFIDSEKRLKQLSDEAKKSTEDLEEAKKNSRFTQVSPKGWERVR
                     ELLKDSQGISALKLYSFLAEHIDPTCGAVVADQQFLAEKLGVSRSTIIRWLNYLESKN
                     ALVRIPVAGKVCAYALDPHEVWKGYNTTKNHAAFVTKTLVNKDGDIQRRIMAMFSN"
BASE COUNT          907 a          545 c          624 g          707 t
ORIGIN      
        1 aaaaaaaata acgtgccaat gatacaaaat aatggaaatc tccaaccatt tagcatgggt
       61 aatttaccat ctattgctaa aacattccca atggaaatcc atacaactat acttcaacag
      121 cttaacccat tggagcatat atccaatgct ataagtagga tttgttacta taaagaacag
      181 tgtaaagcac ttgagcttga gtcactaaaa ataaaagaac aagccagttt tatgcacctt
      241 aaaatagata ctaattttaa aaaggcaatg tatgagctag aaacaagaag aaagagtaat
      301 gagttgaagt tgatagctgc tgcaaatgat tttaagcaaa tatcaataac aaaatcagac
      361 ttaattaaag agatatcaaa gcttgtttca agcatatgta gcaatgacgt ttcgttggaa
      421 agtaaaaagg cgatgaacga tactcttatc attatgaaag gcatgctcag tgatcaacgg
      481 tctgagtcat atgaaaaatt caaatctttg ttaagtagta ttgattctag ttacaatgat
      541 gcgttgttga tagaggatca tcaggataat tatgtttaat atcatactcg gagttgctgc
      601 tgtaggtgtt ggtttatata tcttgaacga acttgatgat cgcgccggag aagaaaaaaa
      661 gcgatgggaa aatcaacgag aatcagtatg taaaagcatt gaagaacata agagatatat
      721 agaacaacat gtcgaatatg ttcaatcaat gtatgatttt catcagttag ttgaccttca
      781 ttattcatgt atgaaagtgg caaatgaagc atataaactt cttaatgatg ctaaaaaatc
      841 aatgggcgct atttatgatg ctatcaataa actcaaagct caccgctcta aattatttaa
      901 tgataaaaaa gaaagcgatg attatgaaaa gaaaaaagaa atacaagcag aaataaacat
      961 gatcaaagaa atcatagatg gcctatactc tgaattagat ttaattaaaa aggataaaga
     1021 acatttttat caggaattaa aagcttttaa cttaaaaact agcagcatta aatacagaat
     1081 tagagacaat accggatata aaggctttga ttggtataat cggttacaag aacgaacttt
     1141 acttcgacgt tagttttgca ctgaaactat atcagataac aatcctccac ggttccggca
     1201 gcgccttgag cgcaaccgga aaccgtctgg ggagaacccc agacccccat cgctgcaaca
     1261 tcgacggtct gcaccacctg ccaaccgagt aactgcctgt tccgtgcgaa tgggctttgc
     1321 agggggctgg cgcggttcct ggcgacctga aagcccctgg ttaggggtat cggcgcgcct
     1381 gacctcctga gagcctctgt aacgcatttt cgcgcctccc atgccctggc gggcatttaa
     1441 aacccgtttc gtgcgtctga gagcgtttga agggctatct gacgactcat ccccgaaaga
     1501 acaacgacgg aatcaccgac aacatgcgag aggtggcacc gctcgccgca gccccagcga
     1561 ccgaacgtta gtgagcgagt gggcgaggaa gcggaagaga accggtagtt agattgagca
     1621 cgtacgcact gatgggtgtc ggggcgcagc cctgaccaga tggcaaacgg aacatcgtcg
     1681 tgggtgacgg tattacattt gcacatcctg tcccgatttt tgaggcattt tagccttcat
     1741 ccccctttta gtggtgaacg gacggcaaaa acatgatgga actgttgaac gtggagagcg
     1801 cgaaatcgga caaaaatcac ggttgacgag gcttgcagag gagtaagcca gtatacactc
     1861 cgctatcgct acgagactgg gtcagggctg cgccccgaca cctccaaagg gtgttgcgtt
     1921 gagcgcaaca cccttgccta gaatagatct tttacgccga tttgtaagtt gttgtttttt
     1981 tagtgtgttt tttgtttacc tgttgcatcc agggtgacac aacgttgtcg catccaggat
     2041 gcgacaacac gcaacaaggt gttgcacaga tgtatcatga tggcttagat ttgaaccaac
     2101 gttagtgcat gggattttca gagggaaaaa tcatgtttat tgattcagaa aaacggctga
     2161 aacaactttc agatgaggca aagaaaagca ccgaggatct cgaagaagca aagaagaatt
     2221 caaggtttac acaggtatcc ccaaaaggtt gggaacgcgt tcgagagctg ctgaaggata
     2281 gccaaggcat atcagcactg aagctgtact catttttagc ggagcatatc gatccaacgt
     2341 gtggcgctgt cgttgcggat cagcaattcc tagctgaaaa acttggagtt agcagaagca
     2401 caattattcg gtggctcaat tacttagaat caaaaaatgc attagttaga atccccgttg
     2461 ctggtaaggt ttgtgcgtat gccctcgatc cacatgaagt ctggaaggga tacaacacta
     2521 cgaaaaacca tgcagcgttt gtcactaaaa cactggtcaa caaagacggt gatattcagc
     2581 gccgaatcat ggccatgttt tcaaattgag ccagcggcag gcggacaatc aggggctacg
     2641 tgttaacgtt ttgaccatga ttgtctatcc tgcattgctc ttttaccacc tagacagcac
     2701 catagtgata agataaacat gctcaaacgt tttatgtaac attagaaaaa ttcagttaat
     2761 taaaaaaggt tttctaaatg agc
//
LOCUS       DADMIB010000293         2741 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.301, whole genome shotgun sequence.
ACCESSION   DADMIB010000293 DADMIB010000000
VERSION     DADMIB010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.301"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(230..2608)
                     /gene="ppsA"
                     /locus_tag="JNZ89_004382"
     CDS             complement(230..2608)
                     /gene="ppsA"
                     /locus_tag="JNZ89_004382"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000069371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HAY8938032.1"
                     /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
                     VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQP
                     ELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
                     KHVFASLFNGRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
                     VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHG
                     KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQ
                     ARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVL
                     VTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENV
                     TVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVG
                     LARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATL
                     GAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFAL
                     ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP
                     SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
                     AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
BASE COUNT          654 a          761 c          683 g          643 t
ORIGIN      
        1 aagaggtggt ggcttttttt agccgtaaac gggtcgcaaa atataaatat cctgaacata
       61 tcgtggtaat cgaaaaacta ccgcgcactg cctcaggtaa aatacaaaag tttttgttaa
      121 gaaaagatat tatgcggcga ttaacgcagg atgtctgtga agagattgaa taagtttcat
      181 cttcggggat cacataaacc cggcgacaaa acgccgccgg gtatttattt tatttcttca
      241 gttcagccag gcttaaccag gtttgcacca cggtgtccgg attcagagac aggctatcga
      301 tcccctcttc catcaaccat gcggcaaaat cttcgtggtc ggacggaccc tgaccgcaaa
      361 tcccgacata tttgccctgt ttcttcgcgg cacggatagc catcgacagc aatgctttca
      421 ccgcatcgtt gcgctcatcg aacagttcag acaccacgcc ggagtcacga tccagaccga
      481 gcgccaactg cgtcatgtcg tttgagccaa ttgagaagcc gtcgaaatat tcgaggaact
      541 gctcggccag caaggcgttg gacgggattt cacacatcat gatgattttc agcccgttct
      601 caccacgctt cagcccctga cgcgccagtt cttcaaccac cgctttcgcc tggtctacgg
      661 tacgcacgaa cgggatcatg atctcaacgt tggtcagccc catgtcgttg cgcacacgtt
      721 tcactgcttc acactccagc gcgaagcagt cgcggaagct gtcggaaaca tagcggcccg
      781 cgccacggaa gccgagcatc gggttctctt catctggctc gtaacgctca ccaccgacca
      841 ggttggcata ttcgttcgat ttaaaatcag agagacggac aatgacgcgc ttcggataaa
      901 acgcggcacc cagcgtcgcg atcccttcag tcagacgacc aacgtaaaat tcacgcggag
      961 aatcaaaacc tttcatcatc tcgcggattt cgttttgcaa ctgcggttcc tgatcgtcaa
     1021 actcaagcag tgcgcgtggg tggacgccaa tcatacggtt gatgataaat tccagacgcg
     1081 caagtcccac gccttcgttc ggcagacagg cgaagtcgaa agctcgatcc gggttaccga
     1141 cgttcatcat cactttcaac ggcagatccg gcatggtttc tacgctggag cttttcacgc
     1201 taaattccag caactccgca tagacgtaac cggtatcacc ttcggcacaa gaaacagtga
     1261 cgttctcacc gtctttcatc cgttctgttg catcaccaca gcccacgacc gccggaatac
     1321 ccagttcacg agcgatgatc gccgcgtgac aggtacgacc gccacggttg gtgactatgg
     1381 cagatgcttt cttcatgatc ggttcccagt ccgggtcggt catgtcagtg accagcacgt
     1441 caccaggttc gatgcggttc atttcgctga tgtcatggat gactttcacc ggacccgcac
     1501 cgatgcgatg accgatagca cggccttcgg cgataatctt accctgtgaa tgcagcgtat
     1561 aacgctccat gacctgaccg cgtgagcgca cggtttccgg acgcgcctgc acaatgaaca
     1621 gtttgccggt gtggccatct ttcgcccact caatatccat cgggcgaccg tagtgtttct
     1681 caatttgtac ggcctgtttt gccagttcct gcacttcttc gttggtcagc gagaagatgt
     1741 cacgctgttc ctgcggtacg tcttcgattt taacctgctt gccgtgctcc tgggtcggcg
     1801 cgtaaaccat gcggattttt ttcgacccca tggtgcggcg cacgatagcc gggcgattcg
     1861 ccgccagtgt cggtttatgc acgtaaaact catccgggtt aaccgccccc tgcacgacca
     1921 tctcaccaag gccccatgcg gaagtgataa acaccacctg gtcaaagccg gattcggtat
     1981 caatggagaa catcacgcca gaagatgcga ggtcggagcg caccatccgc tgaacaccgg
     2041 cggagagcgc cacgccacgg tgatcgtaac cctggtgcac acgataagag atggcgcgac
     2101 cgttaaacag agaagcaaat acatgtttca ctgccacgag aacggcgtca aacccctgaa
     2161 cgttgaggaa ggtttcctgc tgaccggcaa aggaagcgtc cggcatatct tctgcggtgg
     2221 cggaggagcg caccgcaaaa gaggcgtttt cgtcatcggc ggaaagctga gcataggctt
     2281 cgcggatggc gttttccagc tcaggctgga agggagtgtc gataatccac tggcggattt
     2341 gcgcgcccgc tttcgcaagc tgagtaacat cgtcaatatc cgttttatcc agcagttcat
     2401 aaatgcgctg gtttacgccg ctttggtcca gaaactggtt aaacgcgtcg gcggttgtgg
     2461 cgaaaccatt cggaacggaa acgcccattc cggaaaggtt agtaatcatt tcacccaggg
     2521 aggcattttt gcccccaacc ctgtctacat cattcatgcc gagttggttg taccaaagca
     2581 ccagcggtga cgagccattg ttggacatcg aacaatcctt ttgtgataaa tgaacggttt
     2641 gagaaacaca tttctgcgca tttatctttg catatttaac cggatgaaaa aaacggtgaa
     2701 tcgttcaagc aaatatattt ttttactttt taagactgat c
//
LOCUS       DADMIB010000294         2679 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.302, whole genome shotgun sequence.
ACCESSION   DADMIB010000294 DADMIB010000000
VERSION     DADMIB010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2679
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.302"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            231..770
                     /locus_tag="JNZ89_004383"
     CDS             231..770
                     /locus_tag="JNZ89_004383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015870862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY8938033.1"
                     /translation="MSHGGWKEISHPQTLFTRQKGDGWTVVPKNLRIDFYTKDNDFTK
                     GLSVLSEVNKRHTEAQKGLTPSLNISKDDLKVLANARNIPQSKLEEEMMSQAIYRKEY
                     ATSNEKIKNYALYYHEQAQNIIQRHQDGLGNKNIDIAFITDKNHKKHLSDIFKVINES
                     GVKYDVIHFGACRVNREEK"
     gene            complement(996..1319)
                     /locus_tag="JNZ89_004384"
     CDS             complement(996..1319)
                     /locus_tag="JNZ89_004384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nikA protein"
                     /protein_id="HAY8938034.1"
                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLR
                     AAALGKNVNSLTDDRVLKEVMRLGALQKKLFIDGKRIGDREYAEVLIAITEYHRALLS
                     RLMAD"
     gene            1603..1797
                     /locus_tag="JNZ89_004385"
     CDS             1603..1797
                     /locus_tag="JNZ89_004385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HAY8938035.1"
                     /translation="MNKQQQAVLNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHEL
                     AEELQNSIQTRFEVENSTER"
BASE COUNT          867 a          657 c          568 g          587 t
ORIGIN      
        1 aaaaaaaaac aataaaaaac accgcaaaaa tggattgtta acaaatgaaa atactcaatt
       61 cgaatctcat aacaaacata tcatcaacaa taagaaatca ccttctaaca tcatccaaaa
      121 atataaaaac acacccatca ccaaacatgg acgtaacaag tcatcgtcgt ttattccaga
      181 aagacggaat aggattgagc caaacaggaa aagcaacaca acttgtcatt atgtcgcatg
      241 gtggatggaa agagatctcc catccacaaa cactattcac gcgtcaaaaa ggcgatggat
      301 ggactgtagt ccccaaaaac ctaagaattg atttttatac aaaagacaac gacttcacaa
      361 agggactaag cgttctttca gaggtaaaca aacgccatac tgaagctcaa aaagggttaa
      421 caccatcact aaacataagc aaagatgacc taaaagttct agcgaacgcg cgcaatatac
      481 ctcaatcaaa attagaagaa gaaatgatgt cacaagccat atatagaaaa gaatacgcaa
      541 caagtaatga gaagataaaa aactatgctc tatattacca tgaacaagcc caaaatatta
      601 tacaaagaca tcaagatggc ttaggaaaca aaaatattga tatagcattt ataactgata
      661 aaaatcataa gaagcacctt tctgacatat ttaaagtaat aaatgaatca ggagtaaaat
      721 atgatgtaat tcactttggc gcttgccgag taaatagaga ggagaaataa tcatcattta
      781 ccataatccc ttaattgtac gcaccactga aacgcgctga acgcgattct gacgcagaca
      841 ccacaaaaat agatgtttta ccccggaaaa acaggaagga tgcgtcagga tcgttttcag
      901 ctcgctgcat agctatgcat gaaagcgaat ggagatcact ttgggagctt accgtgttca
      961 taccgtctgt tttcaacagt tttctccccg ggaagctaat ctgccataag cctggataac
     1021 agggcacggt gatactccgt aatagcgatc agcacctccg catactccct gtccccgata
     1081 cgcttgccgt cgataaagag ttttttctgt aacgccccca gtctcataac ttctttcagt
     1141 acccgatcat cagtcagtga gttaacgttc ttaccgagag ctgccgcccg taaaaaaccg
     1201 gaaacggtct tgccgcattc agcagccctt tttctgattt cctggtcttc ttctgccgtc
     1261 agacgaacag ggcgactgat agcccgcctg cgcgtattac ttccacttcg ttttgtcata
     1321 aaacatggct ccgtatctga catgggtgtc ggggcaaagc cctgaccagg gcaattgtaa
     1381 tagcgtgcat gtatgcgcgg tataacaatt gcacatcctg tcctgtcagc aagctcgaat
     1441 taccgacaaa ggcacggcag ttttttggca gttacagtgt tgtctgacag aaatgcccgt
     1501 caaaaagcca ggcggcagaa tagcggcagc aaaacagtcg aaaagtggta cgcgatataa
     1561 tcacataacg cagatgacag acagaacgga gaaaacgaaa agatgaacaa gcagcagcaa
     1621 gccgtactca acatggcggg attcataaaa agccagagcc tgacgctgct cgaaaaactg
     1681 gacgcactcg atgctgacga gcaggccacc atgtgtgaga aactacacga actcgcagaa
     1741 gaactccaga acagcataca gacacgcttt gaagtagaaa atagcacaga gagataacgc
     1801 tcaggacagg atgtcgaacg gcacaacaga gcgtaaggag aaaatgtcac ataaggcgct
     1861 cttccgcttc ctcgctcact gactcgctac gctcggtcgt tcgactgcgg cgagcggtat
     1921 cagctcactc aaaggcggta atgcggttat ccacagaatc aggggataac gccggaaaga
     1981 acatgtgagc aaaaagccga aggcagggac aaaggccgcg caggtggcgt ttttccatag
     2041 gctccgcccc cctgacgagc atcacaaaaa tcgacgctca agtcagaggt ggcgaaaccc
     2101 gacaggacta taaagatacc aggcgtttcc ccctggaagc tccctcgtgc gctctcctgt
     2161 tccgaccctg ccgcttaccg gatacctgtc cgcctttctc ccttcgggaa gcgtggcgct
     2221 ttctcatagc tcacgctgtt ggtatctcag ttcggtgtag gtcgttcgct ccaagctggg
     2281 ctgtgtgcac gaaccccccg ttcagcccga ccgctgcgcc ttatccggta actatcgtct
     2341 tgagtccaac ccggtaagac acgaattatc gccactggca gcagccactg ataaccgaat
     2401 tagaggagta agacttgaag tcatgcgcct gttaaggcta aactgaaaga acaagttttg
     2461 gtgactgcgc tcctccaagc cagttacctc ggctcaaaga gttggtatct ctgagaacct
     2521 tcgaaaaacc gccttgcagg gcggtttttt cgtttacagg cagtagatta cgcgcagaaa
     2581 aaaaggatct caagaagaac ctttaatttt ttttcacact tggtatccta ctttaaccca
     2641 taaaataaat acttacaccg acacgccctt aaacaaaag
//
LOCUS       DADMIB010000295         2664 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.303, whole genome shotgun sequence.
ACCESSION   DADMIB010000295 DADMIB010000000
VERSION     DADMIB010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.303"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..268
                     /locus_tag="JNZ89_004386"
     CDS             <1..268
                     /locus_tag="JNZ89_004386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000198547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HAY8938036.1"
                     /translation="MVRYFGFLANRVCGEKLPQVYRALGMDKQEPVAKVCYAQMVKQF
                     LSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDISLLRYMPA"
     gene            complement(407..1861)
                     /gene="ospC2"
                     /locus_tag="JNZ89_004387"
     CDS             complement(407..1861)
                     /gene="ospC2"
                     /locus_tag="JNZ89_004387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC2"
                     /protein_id="HAY8938037.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKINPNKDTKALQKNISCVTNSSS
                     SGISEKHLDHCADTVKSFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYLSEIIQKTHPLSSDERHLLSIIINSDFNFRHQSNANLSNNTLNIKSFD
                     KIKSENIQTYKNTFSEDIEEIANHDFVFFGVEISNHQETLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIF
                     NTKDMRLGIGLHLIDFIRKSKDQRFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLS
                     TDNFKKIRLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNAKSDMALYLLSK
                     FNFTKQDIAEMEKMNNNMYCELYDVEYLLSEDSANYKVLEYFINNGLVDVNKRFQKAN
                     SGDTMLDNAMKSKDSKTIDFLLRNGAVSGKRFGR"
     gene            2286..2664
                     /locus_tag="JNZ89_004388"
                     /pseudo
     CDS             2286..2664
                     /locus_tag="JNZ89_004388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          788 a          504 c          517 g          855 t
ORIGIN      
        1 gatggtgagg tacttcgggt tccttgccaa ccgggtgtgt ggagagaagc tgccgcaggt
       61 gtaccgtgct ctggggatgg ataaacagga accagtggcg aaagtgtgct atgcacaaat
      121 ggtgaaacag ttcctgagtc gtgacccgtt cgaatgcgtg ctgtgtggcg gccggatggt
      181 ataccgccgg gccatcgcgg gactgaatgt ggaggggctg aagaaaaacg cgcgggatat
      241 cagtctgctg aggtatatgc cggcctgaca caggctaagt gtgcccgggg cgttcaccac
      301 atgcaatgtg ttgttgcagg ggaacggtct gcaccatccc ctatatcgat caatataaca
      361 aaaatgacaa cgtcagattc agggcacaac ctaaatatat tttaggtcac ctcccaaatc
      421 gtttgcctga taccgctcca tttcttaata aaaaatcaat tgtttttgaa tctttgcttt
      481 tcattgcatt gtcaagcata gtgtccccac tatttgcttt ttgaaatctt ttgtttacat
      541 caaccaatcc attattaata aaatattcta gcactttata gttggcacta tcttcactaa
      601 gtaaatactc aacatcatac agctcacaat acatattgtt gttcattttc tccatctctg
      661 cgatatcttg ttttgtaaaa ttaaatttag atagtaaata aagtgccata tcagattttg
      721 cattgcctag agaataagca agagcttgat gagccatttt tttatcagtc accttattgt
      781 taatttcttc ataattggat gctttaatgg catcctccaa agatatatct ctgagtctta
      841 tctttttgaa gttatctgtg cttagcattc ttggtatatg atactcaagc tgaaacacaa
      901 agtttataat tctatccaga ctaacaggat caatgttttt attataacaa aactctcgga
      961 atctttgatc tttactcttt cttataaaat caataagatg caacccaatt ccaagcctca
     1021 tatctttagt attaaatatt ggcacatcag tttttccctg attaccatgc acatacctgc
     1081 taacttcatc cacaacctct ttaaagttat ctaagaaaaa tgattggtgc tcatggtaaa
     1141 aaacaggtgg aatagcatta tcaaagtggt cggttaatgt catatatcca tatggagagt
     1201 catgatcaat gatatacgca ttagcaccaa aatccacagt atgatgtgtt ttatttagtg
     1261 ggagtgtttc ttgatgattg gaaatttcaa ccccaaaaaa aacaaaatcg tggttagcta
     1321 tttcttcaat atcctcagag aatgtgtttt tatatgtttg tatattctca gacttaattt
     1381 tatcaaagga cttaatatta agagtattat ttgacaggtt agcgttactt tgatgtctga
     1441 agttaaaatc agaattaata ataatagaga gcaagtgacg ttcatccgaa gaaagaggat
     1501 gagttttttg tattatttca gaaagatagt gtctggacac cttatcgagg tgctcaagtg
     1561 accgaaatga tgaccgtgct ccagatggcg cttcaataga aagatttaat gatttgaaac
     1621 tggtcccttg agagaacatt ttactataac tttgcgctgc tatagacttc cttaaaaagc
     1681 ttttcacagt atcagcacag tgatctaaat gtttttcact tatgccagaa gaggatgagt
     1741 ttgttacgca tgatatgttt ttttgtaatg cttttgtatc tttgttcgga tttatttttc
     1801 catcaacaag atcaatattg ttctgaacat taatatgatt tactgcttca ggtattttca
     1861 taaaacatcc cccattatgt gcgtttttat ctgcagttat ttagaataat attatctaac
     1921 ttaatatttt cttgtatgta ttataacgaa catattttaa tatgttgtac gattttcact
     1981 ctgaaatccc ctgagtttaa tcacacttcc tttactgaaa ggaattattg caacagtatt
     2041 atttgttttt ggatatatat cttgcgcctt gttatgtagt taatgctcag aatatgatag
     2101 ataaaataga gacgcagaac agggcatgct cataacatga tgataacata aaaaattagt
     2161 aacaataaat gaaagaatca tgggcgctca acaaaaagag agctaaatag ctgcgcggaa
     2221 tagtaggctg tgtcccttaa tcatctgagt tatagtaact gtctgtttac acaacatatt
     2281 gaactatggc tcgctacgac cttcccgatg aggcatggac catcatcaag cccctgttac
     2341 ctcctgaacc cgccacacca cgggccggac gcccatgggc tgagcaccgt aaaatcatca
     2401 atggcatgtt ctgggtgtta tgttccggtg caccatggcg cgatttaccc gaacgatatg
     2461 gggcatggaa aactgtttat aaccgcttta accgatggtc aaagtcaggc gtgattaata
     2521 ttattttcaa caggttgctt tcgctacttg atgcaaacgg ctttattgac tggtctgcca
     2581 ccgcgctgga tggcagtaat atccgggcgc tgaaatgtgc cgccggtgct caaaaaaaca
     2641 tcccgatatc gacggagata atgg
//
LOCUS       DADMIB010000296         2625 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.304, whole genome shotgun sequence.
ACCESSION   DADMIB010000296 DADMIB010000000
VERSION     DADMIB010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.304"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..2316
                     /locus_tag="JNZ89_004389"
     CDS             <1..2316
                     /locus_tag="JNZ89_004389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY8938038.1"
                     /translation="KYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQLLQPQFTVEQL
                     RELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARG
                     YVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWT
                     RNDQASSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNS
                     QRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEES
                     DGTQRRFIQPYSSLPMMQRPRHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTF
                     TLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKD
                     IPETNTNIAVSYYRYTNDGYFSFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYAS
                     GSQQDYWGNNEKNRNISVGVSGLQWGIGYSLNYQYSRYTDENNDRALSLNLSIPLERW
                     LPRSRVSYQMTSQKDRPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRS
                     PYGTFSAGYSYGNDSSQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQN
                     YPGIATDPFGYAVIPYLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFN
                     ANIGYRVLVTVSDRNGKPLPFGALASNDDTGQQSIVDEGGILYLSGISSKSQSWTVRW
                     GNQADQQCQFAFNTPDSEPTTSVLQGTAQCH"
     gene            2327..>2625
                     /locus_tag="JNZ89_004390"
     CDS             2327..>2625
                     /locus_tag="JNZ89_004390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY8938039.1"
                     /translation="MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVT
                     VNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKL"
BASE COUNT          734 a          634 c          612 g          645 t
ORIGIN      
        1 aaatacgcac aactaccagg aacttatcag gttgatatct ggctgaataa aaagaaggtt
       61 tcacagaaaa aaattacatt taccgccaat gcagagcaac ttctgcagcc acagtttacg
      121 gtagaacaac tacgtgagct gggtattaag gtggatgaaa tcccggcgct ggctgaaaaa
      181 gatgacgata gcgtgatcaa ctcgcttgaa caaatcattc ccggtacagc tgctgaattt
      241 gatttcaatc atcagcgact taatttgagc attccccaaa ttgcactgta ccgtgatgca
      301 agaggttacg tctccccttc tcgttgggac gatggtatac caacgctgtt taccaactac
      361 tcgtttacag gttctgataa ccgttaccgc cagggcaatc gtagccaacg acagtacctg
      421 aatatgcaaa atggtgctaa ttttggcccc tggcgattac gtaactattc tacgtggaca
      481 cgcaacgatc aggcgtcaag ctggaacact atcagtagtt atttacaacg tgatatcaag
      541 gcgttgaagt ctcagttgct tctgggagaa agcgccacca gcggcagtat tttttccagc
      601 tacaccttta ctggcgtgca actcgcttcc gacgataata tgttgccaaa cagccagcgc
      661 ggatttgccc caacggtacg cggtatcgca aacagtagtg caatcgtgac tatcaggcaa
      721 aatggttatg tgatctatca aagcaacgtg ccagcgggtg cctttgaaat taacgatctc
      781 tacccctctt ccaacagcgg cgatttagaa gtcacgattg aagaaagtga cggtacacaa
      841 cgtcgcttta tccagcctta ttcttcatta cccatgatgc agcgacctag gcatctaaaa
      901 tatagcgcga ccgctggacg ctatcgcgct gatgcaaaca gtgatagcaa ggaacccgaa
      961 tttgctgaag ccacggcaat atatggtttg aataatactt ttacgctgta tggcggcctg
     1021 ctcggttctg aagattatta tgcgctgggg atcggtatcg gcggcacact tggcgcactg
     1081 ggcgcgttgt cgatggatat caacagagct gacacccaat tcgataacca gcactctttt
     1141 catggctatc aatggcgtac gcagtacatc aaagatatcc cggaaaccaa caccaatatc
     1201 gctgttagct actatcgcta taccaacgat ggctatttta gttttgatga agccaatacc
     1261 cgcaattggg actataacag tcgccaaaaa agtgaaattc aattcaacat cagccagaca
     1321 atatttgatg gggtaagtct gtatgcctcc ggttcgcagc aagactattg gggcaataac
     1381 gagaaaaaca ggaatatctc tgttggggtt tccggcctgc aatggggaat tggttacagc
     1441 ctgaattatc aatacagccg ctacactgat gaaaataatg accgtgcact ctctttgaat
     1501 ctcagtattc cgttagaacg ctggttaccg cgtagccggg tttcctatca gatgaccagc
     1561 cagaaagatc gcccaaccca acatgaaatg cgtcttgatg gctcactgct ggatgatggt
     1621 cgcctgagct atagcctgga acaaagtctg gatgacgata acaaccataa cagtagcctg
     1681 aacgccagtt accgttcacc ttatggaacc ttcagtgccg gatacagtta cggtaatgac
     1741 agcagccaat acaattacgg cgttaccggc ggcgtggtta tccatcctca tggcgtgacg
     1801 ctctcgcaat atctgggcaa cgcttttgcg cttatcgatg ctaacggggc ttctggcgtg
     1861 aggatacaaa actatccggg gattgctact gatccctttg gctatgcagt gattccttat
     1921 ctcacgactt atcaggaaaa ccgtctctcg gtagatacta cgcagctgcc cgataacgtc
     1981 gatcttgaac aaacaacaca gtttgtggtg cccaacagag gtgcaatggt agcggcgcgt
     2041 ttcaacgcca atatcggtta tcgcgtactt gttacagtca gcgatcgcaa cggtaaaccg
     2101 ttgccctttg gcgctcttgc cagcaacgat gatacggggc aacaaagtat cgtcgatgag
     2161 ggcggcatac tatatctctc tgggatatcg agtaaatcac aaagctggac tgtacgctgg
     2221 ggaaatcagg cagatcaaca atgtcagttt gcttttaata caccggattc agaaccaaca
     2281 acctctgtat tacaaggcac agcgcagtgc cattaaggat aaaaaaatga aaagagcgcc
     2341 tcttataaca ggacttttgt tgatatccac atcctgcgct tatgcctcct caggagggtg
     2401 tggagccgac agcactagcg gtgcgacaaa ttacagcagt gtggttgatg atgttacggt
     2461 gaaccagaca gataacgtga caggacggga gtttacctct gcaacgctaa gtagcactaa
     2521 ctggcaatac gcctgttcct gctctgcggg taaggcagtt aaacttgtct atatggtcag
     2581 ccccgtactt accaccactg gacatcagac aggatattac aaact
//
LOCUS       DADMIB010000297         2597 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.305, whole genome shotgun sequence.
ACCESSION   DADMIB010000297 DADMIB010000000
VERSION     DADMIB010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.305"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..1073)
                     /locus_tag="JNZ89_004391"
     CDS             complement(<1..1073)
                     /locus_tag="JNZ89_004391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY8938040.1"
                     /translation="MAFKHYDVVRAASPSDLAEKLTHKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGAVISATSDPEYYFVVVLAGQSNGMSYGEGLPLPGTYDRPDPRIKQLARRST
                     VTPGGAACKYNDIILADHCLHDVQDMSRLNHPKADLSKGQYGTVGQGLHIAKKLLPFI
                     PANAGILLVPCCRGGSAFTTGADGTYSDASGASENSTRWGVDKPLYKDLIGRTKAALE
                     KNPKNVLFAVVWMQGEFDFGGTPANHAAQFGALVDKFRADLADMAGQCVGGSAGGVPW
                     ICGDTTYFWKQKNESTYQTVYGSYKNKTEKNIHFVPFMTDENGVNVPTNKPEEDPDIR
                     GIGYYGSKWRDSSATWTSQDRAS"
     gene            complement(1564..1640)
                     /locus_tag="JNZ89_004392"
     tRNA            complement(1564..1640)
                     /locus_tag="JNZ89_004392"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1604..1606),aa:Arg,seq:tct)
     gene            complement(1654..1730)
                     /locus_tag="JNZ89_004393"
     tRNA            complement(1654..1730)
                     /locus_tag="JNZ89_004393"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1694..1696),aa:Arg,seq:tcg)
     gene            complement(1738..1813)
                     /locus_tag="JNZ89_004394"
     tRNA            complement(1738..1813)
                     /locus_tag="JNZ89_004394"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1778..1780),aa:Ile,seq:cat)
     gene            complement(1854..>2597)
                     /locus_tag="JNZ89_004395"
     CDS             complement(1854..>2597)
                     /locus_tag="JNZ89_004395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HAY8938041.1"
                     /translation="AKPSGRWNGCNKESLRAYFPATERILFAEHYQGPYRPKDDGYEA
                     KGSALKQHVMAPLISYFRDARAALGITAKQIADATGKKNMVSHWFSASQWQLPNESDY
                     LKLQALFARVAEEKHRRGELEKLHHQLVDTYTSLNRQYAELLSEYKHLRRYFGVTVQV
                     PYTDVWTHKPVQFYPGKHPCEKPAEMLQQIISASSRPGDLIADFFMGSGSTVKAALAL
                     GRRAIGVELETERFEQTVREVQDLVSQNG"
BASE COUNT          574 a          773 c          632 g          618 t
ORIGIN      
        1 tggctcgccc tgtcctgtga cgtccaggtg gctgagctgt cacgccattt cgaaccgtaa
       61 taaccgatac cccgaatgtc cgggtcttct tccggtttgt tcgtcggcac attcaccccg
      121 ttctcatcgg tcatgaacgg tacgaaatgg atattctttt ccgttttatt tttatagctg
      181 ccgtacaccg tctggtacgt ggattcgttc ttctgcttcc agaaatacgt cgtgtccccg
      241 catatccagg gaacaccgcc agcagagcca ccgacgcact ggcctgccat atccgccagg
      301 tctgcacgga atttatcaac cagcgcacca aactgtgcgg catgatttgc cggcgtaccg
      361 ccaaaatcaa attccccctg catccacacc acggcaaaca gcacattttt cgggttcttc
      421 tccagtgccg cttttgttcg accgataagg tccttataca gcggcttgtc cacaccccag
      481 cgggttgaat tctccgaggc accactcgcg tcactgtatg tgccatcagc tccggtggtg
      541 aacgctgaac caccacgaca gcacggaacc agcagaatgc ccgcattcgc cggtataaac
      601 ggcagcagtt ttttggcgat atgcagcccc tgccccacgg ttccgtactg cccctttgac
      661 aggtccgctt tcggatggtt aagacggctc atgtcctgca catcatgcag acaatggtcc
      721 gccagaatga tgtcgttata tttgcatgct gcaccgcccg gtgtcaccgt actgcgacgc
      781 gccagttgct taatacgcgg gtccggacgg tcatatgtcc ccggcagcgg aaggccttca
      841 ccatacgaca tgccgtttga ctgccctgcc agaaccacaa caaagtaata ctccgggtcg
      901 ctggtggcgc tgattactgc accttctgct gcaatcgcct gcatcagagt ataaggggtt
      961 atggccaccg gactaccaaa cggctgccag ccctctttca gtttatgtgt cagcttttcc
     1021 gcaagatctg acggcgacgc cgccctgaca acatcatagt gtttaaaagc catgaatcct
     1081 cccggccggg ataatattgt gagtaaaatg aggagcgggc tgaagtccgg aagttacagg
     1141 acaatggcag aagagagacg acagcccgca attcgaaaaa gaccgcgcag ttgcgcagag
     1201 tgactactat ggggtattat tcgccagctg aaatattact tcacgtttta ttgtttattc
     1261 cttgccgccc gcgtctccca gcgcgggctt tttttgccca caagaaagcc cctccggaga
     1321 ggggctggag agtggcgcta tgtgccattg catggtgccg ggtgcctccc ggtgaattca
     1381 gtaccagcac ctgaatccgc gattatccca tatacctact cgctgattgc ccctccgcac
     1441 agggggattc accatgccag tttcttttaa caaactcccc gcaaaccaga caacagtcaa
     1501 ccgtctgaat tgtgagacat ttaaaaaaaa aagcccgcaa aagcgagcca gggaaaataa
     1561 gtgtggcgcg ttgtactgga ttcgaaccag tgaccgattg cttagaaggc aattgctctg
     1621 tccggctgag ctaacaacgc atgatgcaga taatggaccg ccatcgggga cttgaacccc
     1681 gcgcagccag cttcgaaggc tggcgctctt tcctgatgag ctaatggcgg tatgtgatgg
     1741 tggcccttgc tggatttgaa ccagcgacct ggcgattatg agtcgctcgc tctcaccact
     1801 gagctaaagg gccgggagcc gcataataac gacgcgtaat taattcttca atatcatccg
     1861 ttctggctga ctaaatcctg tacttcccga accgtctgct caaaacgttc agtctccagc
     1921 tcaacgccaa ttgcacgacg cccgagcgcc agtgccgctt tcactgtcga acccgacccc
     1981 atgaaaaaat ctgcaatcag gtcacccgga cgactgctag cgctgattat ctgctgcagc
     2041 atttctgccg gtttttcgca cggatgtttc ccgggataga actgcaccgg tttatgcgtc
     2101 cacacatcgg tatacggcac ctgcaccgtc acgccaaaat accgccgcag atgtttatat
     2161 tcactcagca gctccgcata ctgccggttc agtgaggtat acgtatccac cagctggtgg
     2221 tggagctttt ccagttcacc acgccgatgc ttctcttctg ccacccgggc aaacagcgcc
     2281 tgtaatttca gataatcgct ttcattcggc aactgccact gactggcact gaaccagtgc
     2341 gacaccatgt ttttctttcc tgtggcatct gcaatctgtt ttgccgttat ccccagggca
     2401 gctcgcgcat cacgaaagta agaaatcagc ggggccatca catgctgttt cagtgcactg
     2461 cccttcgcct catagccatc atctttcggg cggtacggcc cctgataatg ttccgcgaac
     2521 agaatgcgct ctgtggcggg gaaatacgcc cgcaggcttt ccttgttgca tccgttccag
     2581 cgtccggacg gcttcgc
//
LOCUS       DADMIB010000298         2492 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.306, whole genome shotgun sequence.
ACCESSION   DADMIB010000298 DADMIB010000000
VERSION     DADMIB010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.306"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            93..>2492
                     /locus_tag="JNZ89_004396"
     rRNA            93..>2492
                     /locus_tag="JNZ89_004396"
                     /product="23S ribosomal RNA"
BASE COUNT          681 a          535 c          768 g          508 t
ORIGIN      
        1 tcaagctgaa aattgaaaca ctgaacaacg aaagttgttc gtgagtctct caaattttcg
       61 caacacgatg atgaatcgta agaaacatct tcgggttgtg aggttaagcg actaagcgta
      121 cacggtggat gccctggcag tcagaggcga tgaaggacgt gctaatctgc gataagcgtc
      181 ggtaaggtga tatgaaccat tataaccggc gatttccgaa tggggaaacc cagtgtgatt
      241 cgtcacacta tcattaactg aatccatagg ttaatgaggc gaaccggggg aactgaaaca
      301 tctaagtacc ccgaggaaaa gaaatcaacc gagattcccc cagtagcggc gagcgaacgg
      361 ggagcagccc agagcctgaa tcagtgtgtg tgttagtgga agcgtctgga aaggcgtgcg
      421 atacagggtg atagccccgt acacaaaaat gcacatattg tgagctcgat gagtagggcg
      481 ggacacgtgg tatcctgtct gaatatgggg ggaccatcct ccaaggctaa atactcctga
      541 ctgaccgata gtgaaccagt accgtgaggg aaaggcgaaa agaaccccgg cgaggggagt
      601 gaaaaagaac ctgaaaccgt gtacgtacaa gcagtgggag cacgcttagg cgtgtgactg
      661 cgtacctttt gtataatggg tcagcgactt atattctgta gcaaggttaa ccgaataggg
      721 gagccgaagg gaaaccgagt cttaactggg cgttaagttg cagggtatag acccgaaacc
      781 cggtgatcta gccatgggca ggttgaaggt tgggtaacac taactggagg accgaaccga
      841 ctaatgttga aaaattagcg gatgacttgt ggctgggggt gaaaggccaa tcaaaccggg
      901 agatagctgg ttctccccga aagctattta ggtagcgcct cgtgaattca tctccggggg
      961 tagagcactg tttcggcaag ggggtcatcc cgacttacca acccgatgca aactgcgaat
     1021 accggagaat gttatcacgg gagacacacg gcgggtgcta acgtccgtcg tgaagaggga
     1081 aacaacccag accgccagct aaggtcccaa agtcatggtt aagtgggaaa cgatgtggga
     1141 aggcccagac agccaggatg ttggcttaga agcagccatc atttaaagaa agcgtaatag
     1201 ctcactggtc gagtcggcct gcgcggaaga tgtaacgggg ctaaaccatg caccgaagct
     1261 gcggcagcga cgctgatgcg ttgttgggta ggggagcgtt ctgtaagcct gtgaaggtgt
     1321 gctgtgaggt atgctggagg tatcagaagt gcgaatgctg acataagtaa cgataaagcg
     1381 ggtgaaaagc ccgctcgccg gaagaccaag ggttcctgtc caacgttaat cggggcaggg
     1441 tgagtcgacc cctaaggcga ggccgaaagg cgtagtcgat gggaaacagg ttaatattcc
     1501 tgtacttggt gttactgcga aggggggacg gagaaggcta tgttggccgg gcgacggttg
     1561 tcccggttta agcgtgtagg ctggttttcc aggcaaatcc ggaaaactaa ggctgaggcg
     1621 tgatgacgag gcactacggt gctgaagcaa caaatgccct gcttccagga aaagcctcta
     1681 agcatcaggt aacatcaaat cgtaccccaa accgacacag gtggtcaggt agagaatacc
     1741 aaggcgcttg agagaactcg ggtgaaggaa ctaggcaaaa tggtgccgta acttcgggag
     1801 aaggcacgct gatatgtagg tgaagtccct cgcggatgga gctgaaatca gtcgaagata
     1861 ccagctggct gcaactgttt attaaaaaca cagcactgtg caaacacgaa agtggacgta
     1921 tacggtgtga cgcctgcccg gtgccggaag gttaattgat ggggtcagcg caagcgaagc
     1981 tcttgatcga agccccggta aacggcggcc gtaactataa cggtcctaag gtagcgaaat
     2041 tccttgtcgg gtaagttccg acctgcacga atggcgtaat gatggccagg ctgtctccac
     2101 ccgagactca gtgaaattga actcgctgtg aagatgcagt gtacccgcgg caagacggaa
     2161 agaccccgtg aacctttact atagcttgac actgaacatt gagccttgat gtgtaggata
     2221 ggtgggaggc tttgaagtgt ggacgccagt ctgcatggag ccgaccttga aataccaccc
     2281 tttaatgttt gatgttctaa cgttgacccg taatccgggt tgcggacagt gtctggtggg
     2341 tagtttgact ggggcggtct cctcctaaag agtaacggag gagcacgaag gttggctaat
     2401 cctggtcgga catcaggagg ttagtgcaat ggcataagcc agcttgactg cgagcgtgac
     2461 ggcgcgagca ggtgcgaaag caggtcatag tg
//
LOCUS       DADMIB010000299         2469 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.307, whole genome shotgun sequence.
ACCESSION   DADMIB010000299 DADMIB010000000
VERSION     DADMIB010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2469
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.307"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            127..1263
                     /gene="potA"
                     /locus_tag="JNZ89_004397"
     CDS             127..1263
                     /gene="potA"
                     /locus_tag="JNZ89_004397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HAY8938042.1"
                     /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE
                     FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP
                     HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR
                     AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
                     VVMREGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC
                     NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE
                     NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK"
     gene            1247..2110
                     /gene="potB"
                     /locus_tag="JNZ89_004398"
     CDS             1247..2110
                     /gene="potB"
                     /locus_tag="JNZ89_004398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309597.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HAY8938043.1"
                     /translation="MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV
                     KMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLL
                     FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
                     LLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPA
                     MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASR
                     LLNKKVSELDD"
     gene            complement(2342..2413)
                     /locus_tag="JNZ89_004399"
                     /pseudo
     CDS             complement(2342..2413)
                     /locus_tag="JNZ89_004399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387760.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
BASE COUNT          594 a          605 c          622 g          648 t
ORIGIN      
        1 taagccagta attcacaaca aagattggcg attcaagcgg tttgccgtag aattaccgcc
       61 ctcattaaga gtcaccaagg tggttaacca caaaccccgc atcggtaagc catccgttgc
      121 gtttacatgg gacagagtaa aaaattgaat aaacaaccga gttcgctttc accgctggtg
      181 caattggcgg gaattcgcaa atgctttgat ggtaaagagg tcattcccca gctggatctg
      241 actatcaaca atggcgagtt cctcacgctg cttggccctt ctggctgcgg taaaacaacc
      301 gttcttcgcc tgattgcagg tctggaaact gttgattccg gacgcatcat gctggataac
      361 gaggacatca cccacgttcc ggcggaaaac cgctatgtga acactgtttt ccaaagctac
      421 gcacttttcc cccacatgac cgtgttcgaa aatgtggcct ttgggttgcg catgcaaaaa
      481 acccccgctg ctgaaattac gccccgcgtg atggaagccc tgcggatggt gcaactggaa
      541 accttcgctc aacgtaaacc gcatcagctc tctggtggtc aacagcaacg cgtcgccatt
      601 gctcgcgcgg tggttaacaa gcctcgtctg ttgttgctgg atgagtcgct ctcagcgctg
      661 gattacaaac tgcgtaagca aatgcagaac gagctgaaag cgttacagcg taagcttggc
      721 attacattcg tcttcgtgac tcacgaccag gaagaagcac tcaccatgtc agacaggatt
      781 gtggtgatgc gcgagggtcg cattgagcaa gacggcacgc cgcgtgaaat ctacgaagag
      841 ccgaaaaacc tgtttgttgc cggcttcatt ggcgaaatta atatgtttaa cgccacggtg
      901 atcgagcgac tcgacgagca gcgcgtacgc gccaacgttg aaggccgcga atgtaatatc
      961 tacgttaact tcgccgttga accggggcaa aaactgcatg ttctgctgcg cccggaagac
     1021 ttacgtgttg aagagattaa cgacgacaac cacgctgaag ggctgattgg ttacgttcgt
     1081 gagcgtaact acaaaggcat gacgctggag tcggttgttg aactggaaaa tggcaagatg
     1141 gtgatggtca gcgaattctt caatgaagac gatcctgact ttgaccactc tctcgaccaa
     1201 aaaatggcca ttaattgggt agaaagctgg gaggtcgtac tggctgatga agaacacaag
     1261 taagttccag aatgtagtga ttgtcactat tgtcggttgg cttgtgttgt ttgtctttct
     1321 gcccaacctg atgatcattg gcaccagctt tttgacccgc gacgacgcca gtttcgtcaa
     1381 aatggtcttt acgctggata actacacgcg tctgctcgat ccgctctatt ttgaagtgct
     1441 attgcactcg ctgaatatgg cgctgatcgc caccctcgcc tgcctggtgc tgggctatcc
     1501 atttgcctgg tttctggcga agctgccaca caaggtgcgt ccgctgctgc tgtttctgct
     1561 gattgttccg ttctggacca actcattgat tcgtatctac gggctgaaaa ttttcctcag
     1621 caccaaaggc tatctcaacg agtttttgct ctggctgggc gttatcgaca caccaatccg
     1681 tatcatgttc acgcccagtg cggtgattat cggtctggtt tacattctgc tgccgtttat
     1741 ggtgatgccg ctgtactcca gtatcgaaaa actggataag ccgttgcttg aggcggcgcg
     1801 cgatctcggt gccagcaagt tacagacttt tatccgcatc attattccac tgacgatgcc
     1861 ggggattatt gccggatgtc tgctggtgat gctgccagcg atgggcctgt tctatgtgtc
     1921 cgacctgatg ggcggtgcga aaaacctgct gatcggtaac gtcatcaagg tacagttcct
     1981 caatattcgt gactggccgt ttggtgcagc caccagcatt acgctgacta tcgtaatggg
     2041 cctgatgttg ctggtttact ggcgcgcttc tcgtttgctg aataagaagg tgagcgaatt
     2101 agatgattaa tcatttatat tcaatgcatt aagtttgttt ttgagtggtt ttgccgttta
     2161 aggtaacggc gttatagatc ctatcaaaat caatcaattc cattctggtt ttggagaaag
     2221 atttttcgag agcttcggtc tttaactaaa actgattgcg tataacccca atacccctcc
     2281 ccgactatct gaatggtcgg ggaggcactt cacgcacaaa atatcatccc tgcgccgttg
     2341 attactctgc aggtgaagtc ggccactcaa tatcaggtgc agttgatgta tcaacacggt
     2401 tcagcaacac ctgaagtggc acactgaatt tggccacctg aacagaggtg atatgctcac
     2461 ctcagaaca
//
LOCUS       DADMIB010000300         2444 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.308, whole genome shotgun sequence.
ACCESSION   DADMIB010000300 DADMIB010000000
VERSION     DADMIB010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.308"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..753)
                     /locus_tag="JNZ89_004400"
     CDS             complement(<1..753)
                     /locus_tag="JNZ89_004400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HAY8938044.1"
                     /translation="MRVLLRPVLVPELGLVVLKPGRESMPVFHNTRVLVEPEPKSMRN
                     LPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHH
                     SETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERE
                     LSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQR
                     TKNLALLPHAHQQQNPPQEETVVSIAVDPESPA"
     gene            complement(755..1033)
                     /locus_tag="JNZ89_004401"
     CDS             complement(755..1033)
                     /locus_tag="JNZ89_004401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938045.1"
                     /translation="MAHDTKFYNSDNSAAPASRHGRRSHAFKSDWYQHDPCTEEQAEW
                     LIQRYRRHGYEIKKALSLDYRHWIIFVRLPYSERPPRPSCTFQQRIWR"
     gene            974..1159
                     /locus_tag="JNZ89_004402"
     CDS             974..1159
                     /locus_tag="JNZ89_004402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938046.1"
                     /translation="MPAGRRGRVIRIVKFGIVRHLFSLLAQQVPVVQADGWIVNQNDQ
                     KKQNPPKRVKCGCVEDA"
     gene            complement(1201..1413)
                     /locus_tag="JNZ89_004403"
     CDS             complement(1201..1413)
                     /locus_tag="JNZ89_004403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY8938047.1"
                     /translation="MLNTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFTAYEPEE"
     gene            complement(1616..1834)
                     /locus_tag="JNZ89_004404"
     CDS             complement(1616..1834)
                     /locus_tag="JNZ89_004404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938048.1"
                     /translation="MFKCYCTLIVGGIMKNALQFLFVAFWLFASCMPIIFTARYMEKI
                     DVLILMFGHINALFLGVFMAVMCIEYWR"
     gene            complement(2008..2343)
                     /locus_tag="JNZ89_004405"
     CDS             complement(2008..2343)
                     /locus_tag="JNZ89_004405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707879.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938049.1"
                     /translation="MARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDW
                     KYVPKKEDCNDRPNYEIQALFTAPPVPVTSEELVKAVHFYEQLKRENPPASGNQINGL
                     TMSVKRPAN"
BASE COUNT          579 a          639 c          572 g          654 t
ORIGIN      
        1 agccggagat tccggatcaa cggcaatgct gaccaccgtc tcttcctgtg gtggattctg
       61 ttgctggtgg gcgtgaggca gcagcgcaag attttttgtg cgctgcttca gtatgctggt
      121 ggcggtctgc tctcccggca cgatgtcgct ttcacggtac attgagcgga ttttttccgc
      181 acgcaacccc agcgaacgac gtaatactgc ttccggtagc gcgtccgcca cctgattgcg
      241 gaccgcccac caggataatt cagccagaga taattcacgc tcctgcgtac cgcttattgc
      301 gtgaccgatg acgtcaatca tccatgctga caggttttga tgagcaagtt gctcgagtga
      361 ttcggatgtc tggtcacgca actggttgtc gcagtgccag cacaacacca ttgcgccggt
      421 accataacgg tgaatgacgg tttcgctgtg atgataatcg ccgtgtggcc actggcagga
      481 tttaatatgg cgcaacagcc agtcagacaa tgcaccagca ccaccagcag cacgaatcac
      541 ccgtgcgtta ctgaaaaacg gcagcaatgt tttgtcttcc actagcggct ggcgaacggc
      601 aggaacgacc ccggacggca gattacgcat gcttttcggt tccggctcca ccagtacccg
      661 ggtattgtgg aataccggca tggattcacg gcctggctta aggaccacca gcccgagttc
      721 cggaaccaga acaggtcgaa gtaatacccg cacattacct ccagatccgt tgctggaatg
      781 tgcaggacgg acgcggtggc cgttcggaat aagggagcct gacgaagatt atccagtgac
      841 gataatcgag actgagggct ttcttaatct cgtatccgtg tctgcggtag cgctgaatca
      901 gccattcagc ctgttcttcg gtgcaggggt cgtgctgata ccagtcagat ttgaatgcat
      961 gagaacgccg cccgtgcctg ctggcaggcg cggcagagtt atccgaattg taaaatttgg
     1021 tatcgtgcgc catctgtttt ctctgctggc gcagcaggtg ccagttgttc aggctgacgg
     1081 atggattgta aaccagaacg accagaaaaa acaaaacccg ccgaagcggg ttaagtgcgg
     1141 gtgcgttgag gatgcctgac acatcagcgg tggcgaggga tttctccccc gccgggtctc
     1201 ttactcctca ggttcgtaag ctgtgaagac agcgacctcc gtctggccgg ttcggattcg
     1261 tacctcgcag aggtctttcc tcgttaccag tgccgtcact atgacggtta aacagatgac
     1321 gataagggcg attaacatcg ccttttgctg cttcatagcc tgcttctcct tgcctttcgg
     1381 cacgtaagag gctaacctac atgtgttcag catggattga gcctcagatt aatgttaagc
     1441 gtcttgcagg acgcgtagtg ttaactgggg cttttctcta tctgcctttt ggtgttcatg
     1501 cctgagacag atagcctcaa gcacccgcag tcattctact taactaagat ttccctgcaa
     1561 accgtttttg tccggcacag taaatatcca actaaaccaa tagcgttcgc tgtatttacc
     1621 gccagtattc aatgcacatg accgccatga acacccctaa aaaaagggca tttatatgtc
     1681 caaacattaa tatcaaaaca tcaatttttt ccatatacct tgctgtgaag atgatgggca
     1741 tacatgatgc gaacaaccag aacgcaacaa acaaaaactg caatgcgttt ttcattattc
     1801 cccctacaat caatgtgcaa taacatttaa acacacctca atttggccgg acatataaat
     1861 atctaaacca gaaaaaatca cttacatagc gttacaaact ctttagtcta aatactcatc
     1921 gtaaaacatt ccccatactt atcagtccgt tccgcgccag gtagcttatt gccttatctg
     1981 gcaacctata atcaggtttc cgctttttca gttggctggt cgtttaaccg acatagttaa
     2041 cccattaatc tggttgccgg atgctggtgg attttcgcgt tttagttgtt cataaaagtg
     2101 cacagcttta accagttctt ctgatgtaac cgggactggt ggggcagtga ataaggcctg
     2161 aatttcatag ttcggcctgt cgttacaatc ctcttttttc ggtacatatt tccagtcacc
     2221 aacccacaac tccccctgag agtccataac accttttttc acgtagcgat atcgccacgc
     2281 tatcggctct gcttccagcg atgcccgtgc aattttgaat aactcgccct ctactcgcgc
     2341 catccctgaa ttggggtggc atttcgtaat cgctattttt aatttggctt cttcgattaa
     2401 ttgttctttt gttaattcag tcattttcat taccgccctt tcag
//
LOCUS       DADMIB010000301         2440 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.309, whole genome shotgun sequence.
ACCESSION   DADMIB010000301 DADMIB010000000
VERSION     DADMIB010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.309"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(80..871)
                     /gene="kdgR"
                     /locus_tag="JNZ89_004406"
     CDS             complement(80..871)
                     /gene="kdgR"
                     /locus_tag="JNZ89_004406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator KdgR"
                     /protein_id="HAY8938050.1"
                     /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
                     KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISR
                     LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
                     KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFG
                     VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF"
     gene            1048..2421
                     /locus_tag="JNZ89_004407"
     CDS             1048..2421
                     /locus_tag="JNZ89_004407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8938051.1"
                     /translation="MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIAT
                     DLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSD
                     SLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA
                     AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLL
                     ITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICT
                     SVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAG
                     LLGALGLFIMAAGLFSLVLLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRE
                     RSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRI
                     TQPRSRA"
BASE COUNT          516 a          645 c          572 g          707 t
ORIGIN      
        1 taacgcacct tcaactttat ttttctcatg ctaaataaag aacctgtctg tttgatattc
       61 cgacaggttc ttactctcat cagaacggat agtcgtgata acccatttgg gcagaaattt
      121 tgcgcgctgc ggtatgcaac attgcgacat attcctgtaa acgctcttca gagaaacgca
      181 acgtcgggaa ggagatgctc aaaccggcaa tgaccacgcc aaagcgatca aataccggta
      241 ccgcaatgca tcgcagccct tcttcctgct cttcgttatc ttcgccatac ccctgctcgc
      301 gcacctggtc cagaacgggt aataacgctt ctgtactggt gatggtccgc tcggtactgc
      361 gtttatactc cacgccctca agaatttgct tcacttcatc gcgatcgcgc catgccagca
      421 gtaccttacc aatcgcggtg ctgtacagcg gattacgacg cccaatccgt gaatacatgc
      481 gcaaattgta catagagtca attttgtgaa tgtaaacaat actgtcttcg tccagtgcgc
      541 cgaggtggat agtttctttg gtcaggcggg agatctcacg catctggata tctgcgctac
      601 gaattaaatc gacgttttgt aacgcgcgag cgcccagttc aaacaatttc agggtcaggg
      661 aatatttctc cgactcccct tcctgcgcca cataacctaa ggttttcatg gtctgtaaaa
      721 agcgataaac ggtgcttttt gacatcatga cgcgctgcga cagctcggtt atccctattt
      781 cgcgctcttc acccagcgcc tgcaaaatgc caaaaacttt tagcacggaa gatacagaat
      841 caggctgttt atccagatct gcgttagcca tttatcacct cattgcgagt gttttataaa
      901 aatcagaact gttttttatt ataatttcgc accagggggg tcgcaatcca tcttttgccg
      961 gttagttaca attctgcgac atccaccgtg aatatcagtg ctagaatcat acccctgttg
     1021 attattcacc aaagatataa aattcctatg ccaaaagttc aggccgacgg cctgccattg
     1081 ccccagcgat acggtgcgat attaaccatt gtgattggta tttcgatggc tgtccttgac
     1141 ggcgcaatcg ccaacgtcgc cctgccaaca atcgccacgg accttcatgc cacgccagcc
     1201 agttccatct gggtagtgaa cgcctatcaa atcgccattg tcatctccct gctctcgttt
     1261 tcgtttctgg gcgatatgtt tggctatcga cgtatttata aatgcggtct ggtcgttttt
     1321 ctgttgtctt cactgttctg cgccctttct gattcgctgc aaatgctcac ccttgcgcgt
     1381 gtcatacaag gtttcggcgg tgcagcgttg atgagcgtta ataccgcact tatccgcctg
     1441 atctatccac aacgttttct ggggagaggg atgggcataa actcgtttat tgttgccgtc
     1501 tcttctgctg ccgggccgac aattgctgca gcaatcctct ccatcgcatc ctggaaatgg
     1561 ttatttttaa tcaacgtacc gttaggtatt atcgccctgc ttctggcgat gcgttttctg
     1621 ccacccaatg gttctcgcgc cagtaaaccc cgtttcgacc tgcccagcgc cgtgatgaac
     1681 gcgttaacct tcggcctgct tatcactgcg ttgagtggtt tcgctcaggg gcaatcgctg
     1741 acgttaattg ctgcggaact ggtggtaatg gttgttgttg gtattttctt tattcgccgc
     1801 cagctttctc ttcccgtacc gctgctaccg gtggatttac tgcgtatccc gctgttttca
     1861 ctttctattt gcacatctgt ttgctctttc tgcgcacaaa tgctggcaat ggtttccctg
     1921 cccttttacc tgcaaaccgt gctcgggcgt agtgaagtcg aaacaggttt acttctgaca
     1981 ccgtggccgt tagcaacgat ggtgatggct ccgttggcag gctatttgat tgaacgcgta
     2041 catgcaggat tgctgggtgc tctagggttg ttcatcatgg ctgcggggct tttttccctg
     2101 gttctgctgc ccgcgtcacc tgcggatatc aatattatct ggccgatgat cttatgtggc
     2161 gctggatttg gcttgttcca gtcacccaat aaccacacca ttattacctc cgctcctcgc
     2221 gaacgtagcg gtggagccag tggcatgtta ggaacggctc gtctactggg tcagagtagc
     2281 ggcgcggcac tggtggcgct gatgctaaat cagttcggtg ataatggtac gcacgtttcg
     2341 ctgatggctg cggctattct ggcagtgatt gctgcctgtg tcagtggttt acgtatcact
     2401 cagccacgat ccagggcata aaaaaagcgc gtcgatcagg
//
LOCUS       DADMIB010000302         2435 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.310, whole genome shotgun sequence.
ACCESSION   DADMIB010000302 DADMIB010000000
VERSION     DADMIB010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.310"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..301)
                     /locus_tag="JNZ89_004408"
     CDS             complement(<1..301)
                     /locus_tag="JNZ89_004408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HAY8938052.1"
                     /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL
                     VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPG"
     gene            complement(566..825)
                     /locus_tag="JNZ89_004409"
                     /pseudo
     CDS             complement(566..825)
                     /locus_tag="JNZ89_004409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415327.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
     gene            1101..2027
                     /gene="rlmF"
                     /locus_tag="JNZ89_004410"
     CDS             1101..2027
                     /gene="rlmF"
                     /locus_tag="JNZ89_004410"
                     /EC_number="2.1.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
                     /protein_id="HAY8938053.1"
                     /translation="MSAQKPGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV
                     DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP
                     ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLR
                     RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG
                     QQQELWCEGGEVAFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV
                     KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR"
     gene            complement(2087..>2435)
                     /locus_tag="JNZ89_004411"
     CDS             complement(2087..>2435)
                     /locus_tag="JNZ89_004411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001267224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HAY8938054.1"
                     /translation="YHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDA
                     VAELMENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKH
                     FDLVGVRAPVQTY"
BASE COUNT          594 a          578 c          645 g          618 t
ORIGIN      
        1 cgccggggac gtttttgagc gcgtcggtaa ggttggttgc gccctgatct ttaatcactt
       61 gttcagaaat caccgtcatc gtgcgggtag tatccgctac cggacgcgag aatttcggat
      121 cggcagattg ttgtggcgca taaagcgaag gcgttgatgc ttcgacaacc agcgtgtcat
      181 ccgcgttagt ttgcccttcg gcggcgagtg cctgagccac aggcgtgatg ccaatacaaa
      241 gaccggcaaa gaacgtgagc gaatgaaatt gtctggcagg gaaattgcga ttgttttcca
      301 ttttgcaggt gactttttct tatatgttga aattttcact gtcacgagaa agcatctctg
      361 cggatgcgat gccactgtta atcccgtgat agtgttcgtg caagtgataa taattttgat
      421 aagcattatc acttggcgcg attttctatc acccattgcg cgaaaaagaa atacatttat
      481 ttacattgag ttcatatttg atgttttttg attacaaaac aggcgaaaac tgcatccaga
      541 ggcgaatgca gttacgttgg tggggttatt tgtagatggt tgcagtaccg aacatctggt
      601 catttccgcc tgcggaatta atgacataac ctttcgcgcc ttgttcgcgc gctttttctg
      661 ccagtttatc ctccagatcg cttaggtttg atgcgccagt tgccgaaacg gtaccgcggg
      721 ccgtagctga ccgctgtcca ggttactcat cggttgcgcg gcataagccg tgagagagat
      781 tctgctcagg acggtggcaa tcagtagtgt gaggcacttt ttcataatga catcctcata
      841 aatacaacgg gtagtgcctg ataagtgtag gtcgcctgcg cgatgcaaat gacgcaaaaa
      901 attgacagag atgtgcttat tttttgaacg atatattttt acaaaataag acaaatcaat
      961 gacatgcata atgctgattt ttatgatgaa ttgccataaa ccatagccat gttaaggttt
     1021 tggggaatga taaacgcagc cagatattta ccctgtcgcg ttatgcgggt atcttacgcc
     1081 gctgcttaaa ggagaatgct atgtccgccc agaaaccggg gttgcatccg cgcaaccgtc
     1141 atcacagccg ctacgatctc gccacgcttt gtcaggtcaa tcctgaactc aggcaattcc
     1201 tcacgcttac acccgccggg gagcaaagcg tagactttgc caatccgctg gcggtgaagg
     1261 cgctcaataa ggcgttgctg gcccattttt acgccgtagc gaactgggat atccccgacg
     1321 gttttctctg cccaccagta cccggccggg cggattatat tcatcacctt gccgatttac
     1381 tggctgaagc aagcggaaca attccagcga atgccagcat tctggatatc ggcgttggtg
     1441 cgaactgtat ttatccgctg attggcgtac atgaatatgg ctggcgtttt accggtagtg
     1501 aaaccagcag ccaggcgtta agcagtgcgc aggcgattat cagtgctaat ccggggctta
     1561 accgcgccat tcgtctgcgt cggcaaaaag agagtggggc aatttttaac ggcatcatcc
     1621 ataaaaacga gcaatacgac gcgaccttgt gtaacccgcc attccacgat tccgccgctg
     1681 cagcgcgggc aggtagtgag cgtaaacgcc gtaacctggg gctgaacaaa gacgatgcac
     1741 tgaactttgg tggtcagcaa caggagttgt ggtgtgaagg tggtgaagtc gcctttatca
     1801 aaaagatgat tgaagagagc aaaggcttcg cgaagcaggt gatgtggttt acctcgctgg
     1861 tatctcgtgg tgaaaactta ccgccgttgt atcgtgctct gaccgacgtg ggcgcggtga
     1921 aggtggtaaa aaaagagatg gcccaggggc aaaagcagag tcgctttatt gcctggacct
     1981 ttatgaacga cgagcagcgc cgccgttttg tcaatcgcca gcgttaaagc gttggctccc
     2041 ccggcggtaa cggttcagcc ggggtcgcgc ccggagtagg cagcacctaa taagtctgca
     2101 ctggcgcgcg aacgcccacc aggtcgaaat gttttttcac ctggctgtcg agggcaaagc
     2161 gtaccgtcca ctgtttgagt ggcagcgtgg tgaacgaaac acgcagtgta aacgcggtat
     2221 tgcttaagcc gacaatcccg gcaaaattcg gttcaccaat aatcagcccg cgaatttctt
     2281 cgttttccat caattccgct accgcatctt tcagtgcctg attggcttta tcagcatctt
     2341 catggcgatc aacatcgtag tttgccacta ccgaaccaat accgcggacg aagttagcaa
     2401 aggtggttat cgaagaccac ggaatgatgt gatac
//
LOCUS       DADMIB010000303         2411 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.311, whole genome shotgun sequence.
ACCESSION   DADMIB010000303 DADMIB010000000
VERSION     DADMIB010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.311"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..447
                     /gene="yeeE"
                     /locus_tag="JNZ89_004412"
     CDS             <1..447
                     /gene="yeeE"
                     /locus_tag="JNZ89_004412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
                     /protein_id="HAY8938055.1"
                     /translation="VLIGLIALLAWPLSEATGRMFGLGITSPTANILQFLVAGDVKYI
                     NWGVFLVLGIFVGSFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAGGCSIGN
                     GLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN"
     gene            461..688
                     /locus_tag="JNZ89_004413"
     CDS             461..688
                     /locus_tag="JNZ89_004413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HAY8938056.1"
                     /translation="MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATE
                     AIPQWAAEEGHAITDYQQIGDAAWSITVQKA"
     gene            complement(731..2155)
                     /gene="sbcB"
                     /locus_tag="JNZ89_004414"
     CDS             complement(731..2155)
                     /gene="sbcB"
                     /locus_tag="JNZ89_004414"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HAY8938057.1"
                     /translation="MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGE
                     PEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYN
                     NVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGL
                     PSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMA
                     LIDVPQMPPLVHVSGMFGAWSGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSD
                     TLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLK
                     ILRENPQVREKVVAIFAEAEPFTPTDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPA
                     LDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQMLV
                     QQYADDKEKVALLKALWQYAEEIV"
BASE COUNT          581 a          575 c          620 g          635 t
ORIGIN      
        1 gtactcatcg gtttgattgc gcttttagcc tggcccctga gtgaagcaac cggacgcatg
       61 tttgggttag gaatcacttc cccaacggcc aatattctgc aatttctggt cgcgggtgac
      121 gtgaaataca ttaactgggg cgttttcctg gtgttaggga tcttcgtggg gtcatttatt
      181 gcagccaaag cgagccgtga gttccgcgtt cgcgcagctg atgcacaaac aacattacgt
      241 agcgggttag gtggtgtact gatgggcttc ggtgccagta ttgcaggtgg ttgctctatc
      301 ggtaatggac tggttatgac tgcaatgatg acctggcagg gctggattgg ccttgtattt
      361 atgattctcg gagtctggac tgcatcctgg cttgtgtatg ttcgaccgca gcgtaaggcg
      421 cgactggcga ctgctgcggc aaattaagta aggtgtaaag atggcgatta aaaagctgga
      481 tgtggtgacg caggtctgtc cgtttccact catagaagca aaagcagcac tggcagaaat
      541 ggccagcggc gatgagttgg taattgagtt tgattgcacc caggcaactg aagcaatccc
      601 acagtgggcg gcagaagaag gacatgccat caccgattat cagcagattg gcgatgcagc
      661 gtggagcatc accgttcaaa aagcctgact caacattgtc ctccgccgta ccagcggcgg
      721 aggcttcaaa ttagacgatc tcttccgcgt actgccaaag tgcttttaac agcgccactt
      781 tttctttgtc atcggcatat tgttgtacca gcatctgcaa ttcatcagca taaccctgca
      841 aaaactctgg cgtgaatacc tggcggcggt gctccagcca gcgttgctgc tcggcataat
      901 ccagcgtccc cgggaagttg cgtgcccgat aattgaacaa cagcttttca atccgtttat
      961 caacaaaagt gatatccagt gccggtaaat tacgtggctc ggtttccagc acaattttca
     1021 ttgctgcacg atctgcgtca ctgaaaaagc cgttataaag ctgtgcatcc acgttatctg
     1081 taggcgtaaa cggttcggct tccgcgaata tcgccaccac tttttcacgc acttgcggat
     1141 tttcacgcag aattttcagg ttatcgaggc aatgctgacg attaattccc agtcggtcgg
     1201 catcttccgg gcgtagcgta ttcgcctggg ccagcaccgg acatttattg atgtgcacca
     1261 gcttaaccgg aacggcggcg ttatcgccaa gatcggtttt tgcggtatat aaacgctcgc
     1321 gcaatgtgtc gctatccagt tccagtaatg gcgaaatgtc tcctgccaaa tccaccataa
     1381 ttacagcatt gcgattttca ggatgccacg ccagcggtgc cacccagctg gtattgccgc
     1441 tccatgcccc aaacattccg gaaacgtgaa ccaggggggg catctgcgga acatcaatca
     1501 acgccatcag tttgtgttta ttacgatggg taaagagata atcaaacagg cgtggctgac
     1561 gcgtttttac cagtttcgcc atcgcaatag tggcgtacac atcagccatc gcatcgtggg
     1621 cgttgctatg ttcaatacca ttcgctttgg ttaaatgctc aaggcgaaag ctcggtagac
     1681 cgtcatcatt ttcaggccag tttattcctt ccgggcgcag ggcataacag gcacgcataa
     1741 catccaacaa atcccagcgc gagttatcat gctgccagct ccaggcgtaa ggatcgtaga
     1801 aattacgata aaaaacgttg cgtgtgactt cgtcgtcgaa acgcacattg ttgtagccca
     1861 gaatacaggt cttcggtacg gtaaaaagcg agtgaatacg ggcggcaaac gcggcttcgt
     1921 tttctccttt cgcccgtgct tcctgcgggg taataccggt aattaatact gctccaggct
     1981 ggggtaaata gtcatccgcg ggcttgcagt aaaagacttc gggttcgccg atgacattga
     2041 attcgctatc ggtgcgaatg gctgcgaact gtgcagggcg atctaacgcg gggtgcgtgc
     2101 caaaggtttc gtaatcgtga aagaggaagg taggttgttt atctgtgtct gtcattgtct
     2161 agcattgtcc actgtagtta attaactgtc tgttataact cgaaaaacaa ccattttttc
     2221 acctgagtat gtctacgaac gtcaaatata gttgtttact gtgcgctgtt gtccatgtga
     2281 tattgtgtac cagatgtgta ccaaaccatt atttctgagc gtaccaaata ttatttatgg
     2341 ctataagcga cacaaaactg cgtagtattt atggtaaacc atattcgggc ccacaagaag
     2401 tggctgatgc c
//
LOCUS       DADMIB010000304         2393 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.312, whole genome shotgun sequence.
ACCESSION   DADMIB010000304 DADMIB010000000
VERSION     DADMIB010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.312"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..2392
                     /locus_tag="JNZ89_004415"
     CDS             <1..2392
                     /locus_tag="JNZ89_004415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Tn3-like element TnAs3 family transposase"
                     /protein_id="HAY8938058.1"
                     /translation="LDDLLKRRDNGKTTWLAWLRQSPAKPNSRHMLEHIERLKAWQAL
                     DLPTGIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALATEGMATVTDEII
                     DLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIGQALIDAKQSGRDAFAAIE
                     AVMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLRRYAPEFLAVLKLRAAPAAKN
                     VLDAIEVLRGMNTDNARKLPADAPTGFIKPRWQKLVMTDAGIDRRYYELCALSELKNS
                     LRSGDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSELPLAVATDCEQYLHERLTLLEAQ
                     LATVNRMAAANDLPDAIITESGLKITPLDAAVPDTAQALIDQTAMVLPHVKITELLLE
                     VDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAWLQ
                     AWHTRDETYSTALAELVNAQFRHPFAGHWGDGTTSSSDGQNFRTASKAKSTGHINPKY
                     GSSPGRTFYTHISDQYAPFHTKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFT
                     DHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKPMIGGTLNIKHVRAHWDEI
                     LRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRR
                     VHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLER
                     AAHALRGNGHAVDDSLLQYLSPLGWEHINLTGDYLWRSSAKIGAGKFRPLRPLQPA"
BASE COUNT          492 a          807 c          699 g          395 t
ORIGIN      
        1 cctcgacgat ctgctcaagc gccgggacaa cggcaagacg acctggttgg cttggttgcg
       61 ccagtctccg gccaagccaa attcgcggca tatgctggaa cacatcgaac gcctcaaggc
      121 atggcaggca ctcgatctgc ctaccggcat cgagcggctg gttcaccaga accgcctgct
      181 caagattgcc cgcgagggcg gccagatgac acccgccgac ctggccaaat tcgagccgca
      241 acggcgctac gccactctcg tggcgctggc caccgagggc atggccaccg tcaccgacga
      301 aatcatcgac ctgcacgacc gcatcctggg taagctgttt aacgctgcca agaataagca
      361 tcagcagcag ttccaggcgt caggcaaggc catcaacgcc aaggtacgtc tgtacgggcg
      421 catcggtcag gcgctgatcg acgccaagca atcaggccgc gatgcgtttg ccgccatcga
      481 ggccgtcatg tcctgggatt cctttgccga gagcgtcacc gaggcgcaga agctcgcgca
      541 acccgatgac ttcgatttcc tgcatcgcat cggcgagagc tacgccaccc tgcgccgcta
      601 tgcaccggaa ttccttgccg tgctcaagct gcgggccgcg cccgccgcca aaaacgtgct
      661 tgatgccatt gaggtgctgc gcggcatgaa caccgacaac gcccgcaagc tgccagccga
      721 tgcaccgacc ggcttcatca agccgcgctg gcagaaactg gtgatgaccg acgccggcat
      781 cgaccggcgc tactacgaac tgtgcgcgct gtccgagttg aagaactccc tgcgctcggg
      841 cgacatctgg gtgcagggtt cacgccagtt caaggacttc gaggactacc tggtaccgcc
      901 cgagaagttc accagcctca agcagtccag cgaattgccg ctggccgtgg ccaccgactg
      961 cgaacaatat ctgcatgagc ggctgacgct gctggaagca caacttgcca ccgtcaaccg
     1021 catggcggca gccaacgacc tgccggatgc catcatcacc gagtcgggct tgaagatcac
     1081 gccgctggat gcggcggtgc ccgacaccgc gcaggcgctg atagaccaga cagccatggt
     1141 cctgccgcac gtcaagatca ccgaactgct gctcgaagtc gatgagtgga cgggcttcac
     1201 ccggcacttc acgcacttga aatcgggcga tctggccaag gacaagaacc tgttgttgac
     1261 cacgatcctg gccgacgcga tcaacctggg cctgaccaag atggccgagt cctgccccgg
     1321 cacgacctac gcgaagctcg cttggctgca agcctggcat acccgcgacg aaacgtactc
     1381 gacagcgttg gctgaactgg tcaacgctca gtttcggcat ccctttgccg ggcactgggg
     1441 cgatggcacc acatcatcat cggacggaca gaatttccga accgctagca aggcaaagag
     1501 cacggggcac atcaacccaa aatatggcag cagcccagga cggactttct acacccacat
     1561 ctccgaccaa tacgcgccat tccacaccaa ggtggtcaat gtcggcctgc gcgactcaac
     1621 ctacgtgctc gacggcctgc tgtaccacga atccgacctg cggatcgagg agcactacac
     1681 cgacacggcg ggcttcaccg atcacgtctt cgccctgatg cacctcttgg gcttccgctt
     1741 cgcgccgcgc atccgcgacc tgggcgacac caagctctac atcccgaagg gcgatgccgc
     1801 ctatgacgcg ctcaagccga tgatcggcgg cacgctcaac atcaagcacg tccgcgccca
     1861 ttgggacgaa atcctgcggc tggccacctc gatcaagcag ggcacggtga cggcctcgct
     1921 gatgctcagg aaactcggca gctacccgcg ccagaacggc ttggccgtcg cgctgcgcga
     1981 gttgggccgc atcgagcgca cgctgttcat cctcgactgg ctgcaaagcg tcgagctacg
     2041 ccgccgcgtg catgccgggc tgaacaaggg cgaggcgcgc aatgcgctgg cccgtgccgt
     2101 gttcttcaac cgccttggtg aaatccgtga ccgcagtttc gagcagcagc gctaccgggc
     2161 cagcggcctc aacctggtga cggcggccat cgtgctgtgg aacacggtct acctggagcg
     2221 tgcggcgcat gcgttgcgcg gcaatggtca tgccgtcgat gactcgctat tgcagtacct
     2281 gtcgccactc ggctgggagc acatcaacct gaccggtgat tacctatggc gcagcagcgc
     2341 caagatcggc gcggggaagt tcaggccgct acggcctctg caaccggctt agc
//
LOCUS       DADMIB010000305         2379 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.313, whole genome shotgun sequence.
ACCESSION   DADMIB010000305 DADMIB010000000
VERSION     DADMIB010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.313"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..302)
                     /locus_tag="JNZ89_004416"
     CDS             complement(<1..302)
                     /locus_tag="JNZ89_004416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938059.1"
                     /translation="MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRER
                     TWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYA"
     gene            complement(312..1694)
                     /locus_tag="JNZ89_004417"
     CDS             complement(312..1694)
                     /locus_tag="JNZ89_004417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside-pentoside-hexuronide family
                     transporter"
                     /protein_id="HAY8938060.1"
                     /translation="MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPA
                     GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD
                     LSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
                     LSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMR
                     EDLRDIWQNDQWRIVGLLTIFNILAVCVLGGAMMYYVTWILGTPEVFVAFLTTYCVGN
                     LIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQL
                     VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA
                     AEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQ
                     QQFTSQEVQN"
     gene            1987..2081
                     /locus_tag="JNZ89_004418"
     tRNA            1987..2081
                     /locus_tag="JNZ89_004418"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2021..2023,aa:Sec,seq:tca)
     gene            2190..2335
                     /locus_tag="JNZ89_004419"
                     /pseudo
     CDS             2190..2335
                     /locus_tag="JNZ89_004419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001626279.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
BASE COUNT          639 a          596 c          558 g          586 t
ORIGIN      
        1 gcataacgtt ctgtgttttc gattgtgacc ttcacgtcct gcaaaatatt gagcggataa
       61 tgaggaccgt tattcagcgc tccctgaaaa tgctcaatcc gcacaccgac aataccttcc
      121 tgtggggaga aaaagcgcag cgtaaataaa ggcgtatcaa gctgccaggt acgttcacgc
      181 acatcacggg gggcagcata gaccaccatt tcattatcct gctgttcaac ctcgaacacc
      241 tgaagcgggt gaatcaaatt gaggccaggt tgaatcaacc agtttccatc gctaattttc
      301 attgccgttc cttagttctg cacttcttga gaggtgaatt gttgctggca acggcgttta
      361 ccctgagcca gctgttccat aacggttttc agattgtgcg tcgtgagtga gtagtagcgt
      421 ttagcgataa tcgcgctcag caaataacag atcgccggaa caatcgtgaa tagcgcaata
      481 atgatgctaa tcgtggcgct gttctgcgct ttttctgccg catcatatcc gccataagcc
      541 agcatccagc cgataagagc gccgccgaag gccaacccca gtttgagcac aaacagcgtg
      601 ccagcaaaac tgatcccggt caggcgttta ccattgcacc actcgccgta gtcgacggta
      661 tcggacatca ttacccactg gataggtgtc accagttgat gcaacacacc aatcacgaag
      721 atgaagacaa acatagtgat gctggcctgc atgggaacaa agaacatcgc gaggctaatc
      781 actgccagca gggcgttcgt ccaccagaag atagtgactt tacatttcca gtcggtcaga
      841 ggttttgcca gtgcggaacc aatcaggtta cccacgcaat aagtggtgag aaaagcgaca
      901 aacacttccg gcgtgcccaa aatccatgtg acgtaataca tcatcgcccc accgagtacg
      961 cacaccgcca ggatattgaa aatggttagt aaaccgacaa tccgccactg gtcgttttgc
     1021 cagatatcac gtaaatcttc ccgcatagac gttgttgtag gtggtgcttc aacgcgttct
     1081 ttagtggtga agaaacaaaa tgccagcatc atgaatgcca ccacggaaag gaccgcgata
     1141 ccgccctgga aaccgagtgg tttattatca ccgccaatta aattaaccag tggcatcatc
     1201 agaacagtag aaagcatgcc tcccgcggtc gccagcacaa aacgccagga ttgcagcgag
     1261 atacgctgag tcgggtcatt ggtgattaca ccacccaatg cgcagtaagg gatattgacg
     1321 acggtataaa gtaaggtaag tagggtgtaa gtaattgctg catagatcat tttgccgttc
     1381 atactgagat ctggcgtgct ataggccagt acacagacga tcccgaatgg cagtgcgcca
     1441 aacagtaccc acggacgaaa tttaccccag cgagagcgcg ttcgatcggc caacaacccc
     1501 atgcaaggat cggaaatcgc atccagtgca cgagcgacca aaaacatggt tccgacaaaa
     1561 ccggcaggaa tgccaaaaat atcggtataa aagaacatca tatataacat tacgttatcg
     1621 aaaataatgt ggctggcggc gtctcccatg ccataaccaa ttttctcttt aacggacaac
     1681 acttcactct tcatctgctt ttccttgatg ctataggggt gctgagaccg ataacgcatt
     1741 ttgtaaacca tccctgtgag agcgaatatt ccgatatctg gttattaatt tatgattctt
     1801 gttttatgtg atcgtggtag cgttaattcc gctcatatgt cattgtaaaa tatgggtttt
     1861 atatgaacta taatgctttc gtgataatac gctgcgtgta ttaggcggaa aaaactgatc
     1921 tgggggatgt agaaactcaa ggaagtagct ataatgcgcc ccgcctccat gtagcaatcg
     1981 aggcgcggaa gatcgtcgtc tccggtgagg cggctggact tcaaatccag ttggggccgc
     2041 cagcggtccc ggacaggttc gactcctgtg atcttccgcc aaaatgcctc ttctgacgtt
     2101 ctccaacccc ttgtaatact gtcaatccag atattttcta ctgctcaata ttcaatcggc
     2161 ttcaggaata cctggtctaa ggttttgtga tggacgatga gcggctgaag aatccgcctg
     2221 tcggttcttc tgtcctcgaa cgcatccgcg atatgcgcgc cagcatgtgc cgtgtttatt
     2281 tgcaggtgat ttgccccctg ctggctctca gccaactgta tcgccattaa ggtgaagatg
     2341 ttgttttaca cgctccataa cacccttttt tatacgact
//
LOCUS       DADMIB010000306         2367 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.314, whole genome shotgun sequence.
ACCESSION   DADMIB010000306 DADMIB010000000
VERSION     DADMIB010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.314"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..808)
                     /locus_tag="JNZ89_004420"
     CDS             complement(<1..808)
                     /locus_tag="JNZ89_004420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000151282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HAY8938061.1"
                     /translation="MTIEKSRFSSGAAPQPNVNTGVINGNDFAAIVPVIAGRIGGREA
                     NIVSAKALHKALGVGRDFTNWIKGRIDQYGFIAGTDFIRVENLSTPKRASAKTRQQIE
                     HDYLLSLDMAKEVAMVERNEQGRAIRRYFIQCEEELQRSVPEIAARYRRQLKARLSAA
                     NNFKPMCDALNMARAEMGKTTQQRHYSNESNMIARIVLGGMTAKQWAQANGITGEPRD
                     SMNAAQLEHLAYLESTNITLIDMGMEYEQRKGELTRLSQRWLAKRLEVNHA"
     gene            complement(822..1253)
                     /locus_tag="JNZ89_004421"
     CDS             complement(822..1253)
                     /locus_tag="JNZ89_004421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938062.1"
                     /translation="MEKKNRPLQAANSDIRVSDVTPLTKSLQAPKRTPKKHRARVYML
                     RTGIEGWTENDILRYCRLSSGRNYASELERRLDIQLERIDEKNPDGIGSHLRYRFTGR
                     GDVLKVIRLVNHNADAGGYQGLSQPEIADILNLYPDNLTAA"
     gene            complement(1253..1456)
                     /locus_tag="JNZ89_004422"
     CDS             complement(1253..1456)
                     /locus_tag="JNZ89_004422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HAY8938063.1"
                     /translation="MNIDTIPTKGYIRRFRLAELLGVSVSTIDRKVRNGSLPRPVKLG
                     EKITAFDAVEIHNWLAERRGKVA"
     gene            complement(1569..>2367)
                     /locus_tag="JNZ89_004423"
     CDS             complement(1569..>2367)
                     /locus_tag="JNZ89_004423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000735989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938064.1"
                     /translation="LLEIDIDDLLIMAAAESIYLSAYLCGYDGTLHSIASLYRNCSLF
                     PDVKEDCLLLADIITEVEDEKSFKAGVVNHIDCHVLGLWHVNASYILDIAGLDSIDTP
                     ARIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYITRPWVEYIGECMDKNQPI
                     YSPETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYVKRHYPEECKGKNGKETN
                     EAWANATINHWALLGGGYDEPSIDYLKKLIADADRTPEERTTAGKKR"
BASE COUNT          509 a          590 c          571 g          697 t
ORIGIN      
        1 acgcatggtt tacctccaga cgtttagcga gccagcgttg cgacaggcgg gtgagttctc
       61 ctttgcgctg ctcatattcc atgcccatat caattaacgt gatattggtg ctttcgagat
      121 aggcgaggtg ttcaagctgt gctgcgttca tgctgtcccg tggttcgcca gtaatgccat
      181 ttgcctgcgc ccactgcttc gccgtcatgc cacccagcac gatacgggcg atcatgttgc
      241 tctcgttgct gtagtggcgc tgctgcgtcg ttttgcccat ctcggcacgg gccatattca
      301 gcgcatcgca cattggctta aagttgtttg cggcactgag acgggctttt agctggcgac
      361 gatagcgggc ggcgatttca ggcacgctac gctgtaattc ttcctcgcac tggatgaaat
      421 aacggcggat agcgcggccc tgctcgttgc gttcaaccat tgccacttct ttagccatat
      481 ccagcgatag caggtaatca tgctctattt gctggcgagt ttttgcgctc gcccgttttg
      541 gcgtgctcaa attttcaaca cggataaaat cggttccggc aataaaaccg tactggtcaa
      601 ttcggccttt aatccagtta gtaaagtcgc ggcccacccc cagcgcttta tgcaacgcct
      661 tagcgctcac aatattggct tcacgcccgc caatgcgtcc ggcaataacg ggaacaatag
      721 cggcaaagtc gttgccgtta attactcccg tgttaacgtt gggttgcggg gcggcccccg
      781 aactgaatcg gcttttttcg atagtcatat tttcggctcc gttatgcggc ggtgagattg
      841 tccgggtata gattgagaat gtcggcaatt tcaggctgag aaagtccctg atagccgcca
      901 gcgtcggcgt tatggttcac aagccgaata acttttagaa cgtcaccgcg cccggtaaag
      961 cgatagcgta aatgtgaccc tatcccgtcg gggttctttt cgtctatacg ctcaagctga
     1021 atatcaagcc tgcgctctaa ctcgctggcg tagttccttc cagacgaaag gcggcaataa
     1081 cgcagaatgt cattttctgt ccatccctct ataccagtac gcagcatata gactctggca
     1141 cgatgctttt tcggtgtgcg ctttggtgct tgaagggatt ttgtaagggg cgtaacatca
     1201 gatacgcgaa tatctgaatt agccgcctgt aatgggcggt ttttcttttc catcaggcca
     1261 ccttcccgcg gcgttctgcc agccagttgt gaatctcaac cgcatcaaac gcagttattt
     1321 tttctcccag ctttaccgga cgtggtagtg aaccgtttct tactttacgg tcgatggtgg
     1381 atacactaac gcccagcaat tcagccaggc ggaagcgtct gatatagcct tttgtaggga
     1441 tagtgtcgat gttcatgatt cccgtaacct cttagcgata gttgttgctt cgttacgggt
     1501 atttaatggc gtgcacgctc aaaaaggaat gatcgtattt tttactatcg tgatagtaaa
     1561 atttactatc accttttttt ccctgccgtg gtgcgttctt ccggtgttct gtctgcgtcg
     1621 gctatgagtt tcttcaggta atctatggat ggctcatcat agccgccccc caaaagcgcc
     1681 cagtggttta ttgtggcgtt cgcccatgct tcgttggttt ccttcccgtt cttcccttta
     1741 cactcttctg ggtagtgccg cttcacataa atcaacgcca agaggcaaat ttcgcgcttt
     1801 tgcctgtggc gctctctgtt tccgtgctca acgtttttaa catcctcata aagagcttgt
     1861 aagtttatgc gagtttcggg gctgtatatg ggctggtttt tgtccatgca ttcgccgata
     1921 tattcaaccc acggccttgt tatgtacaaa tcctctacgg atatttcgtg gaaggcatgt
     1981 tttgtataat cgagaaaaaa ataataattc gcacttacgt ctagttctct ttttctgtgt
     2041 gcggggctga atatgcgtgc gggagtgtca atagaatcaa gccctgcgat gtcgagtata
     2101 taggaggcgt taacatgcca tagcccaagc acatggcaat ctatatgatt tacaacgcct
     2161 gccttaaagc ttttttcgtc ctctacttca gtgattatgt cggcaagtaa taagcagtct
     2221 tctttgacgt ctgggaataa agagcaattg cggtaaagac tcgcgatgct atgtaatgtg
     2281 ccgtcgtagc cgcaaaggta cgcgctcaaa tatatagatt ctgccgccgc cataatcaaa
     2341 agatcatcaa tatctatttc taataat
//
LOCUS       DADMIB010000307         2351 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.315, whole genome shotgun sequence.
ACCESSION   DADMIB010000307 DADMIB010000000
VERSION     DADMIB010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.315"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..716)
                     /locus_tag="JNZ89_004424"
                     /pseudo
     CDS             complement(1..716)
                     /locus_tag="JNZ89_004424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611483.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            902..1744
                     /locus_tag="JNZ89_004425"
     CDS             902..1744
                     /locus_tag="JNZ89_004425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HAY8938065.1"
                     /translation="MLNGGGILFKANHVPVLMYHHVSHCPGLVTLSPETFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLNEFNLKAHIFLIT
                     SFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKFTSREEQCKHLRQDLLSGREYLKKMTGKCSKHLCWPEGYYNKDYIQIAEELG
                     FHYLYTTERRMNAPAKGTTRIGRISTKERENCVWLKRRLFYYTTPFFSSLLALHKGPR
                     LPDD"
     gene            1747..2351
                     /gene="capU"
                     /locus_tag="JNZ89_004426"
                     /pseudo
     CDS             1747..2351
                     /gene="capU"
                     /locus_tag="JNZ89_004426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
BASE COUNT          631 a          478 c          536 g          706 t
ORIGIN      
        1 aggtcacatc accgcaccac acctgatttg gttccgttac ggcgaactgt cgctcaagat
       61 gattcgggat agcaacgtgc tcatgaccgc cacgcttata ccggtgagtc ggctgctggc
      121 aactgaccag ccccagctct ttcatgagtc tgccagcaag ccagcgcccc atctggtagc
      181 ctctctgggt tgccattgtg gcgatgcttc ttgctccggc agagccgtgg ctgatgccat
      241 gcagttcaag tacctggctg cgtaatacag cccgtctgcc gtctggtttt tcaggacggt
      301 ttttccagta tttgtagctg ctgcgatgga ccccgaacac atggcagaga gtggccacag
      361 gataacgcgc cctgagtttc ccgattatcg aaaactgttc agggagtctg acatcaagag
      421 cgcggtagcc tttttaatat ttcattttcc atttcaatac gttgtagctt tttcctgagc
      481 tcacggattt caatttgttc cggggtaatg ggggaggctt ttggtgtttt tccctgccgc
      541 tcatcacgta attgtttcac ccatcgcgtc attgtggaaa ggccgacatc catagcgctg
      601 gctgcatctg ccacggtgta tttctggtca acgaccagtt gagcggattc gcgtttaaac
      661 tctgcgctga aatttctttt ttcattatgg cacctgtgtt gttctgaggt gagcatatca
      721 cctctgttca ggtagctaaa tttagtgtgc cacctcaagg ttcttagtga gccgttttta
      781 aaagatatga taatatatta ttgtttataa attgttgatg tttgatttag tagtatataa
      841 agttcaccac ctttattagg ctttcctttt atctctactt actgggtgcc agaaacttta
      901 aattttaaac ggagggggca ttttgtttaa agcaaatcat gttccggtat taatgtatca
      961 tcatgtcagc cattgcccag gactggttac actttctccc gagacattcc ggaaacaaat
     1021 gaaatggttg gctgaaaaca actggaaaac actgtcatca gatgaactgg agttttttta
     1081 tcggggcgga aaacttcccc gtaaaagcgt tatgttgaca tttgatgatg gataccttga
     1141 caactggttt caggtatatc ctttattaaa cgagtttaat ctcaaggcac atattttttt
     1201 aattaccagt tttattggaa atggtccggt tcgtcactct cctggaaagg aatattctca
     1261 tcgcgattgc gaacatcaaa tagcaaccgg gaatgctgat aatgttatgc ttcgctggtc
     1321 tgaagtgaac gaaatgttgc aatctggtct ggtcgaattt catgttcata cacatactca
     1381 tacacgttgg gataaaaagt tcacttcacg agaagaacag tgtaaacatc ttcggcagga
     1441 cttattgagc gggagagaat atttaaaaaa aatgacagga aaatgcagta aacatttgtg
     1501 ttggccggaa ggttattata acaaggatta tattcagatc gctgaagaac ttggattcca
     1561 ttatttatat acaacagaaa gaagaatgaa tgctcctgct aaaggaacta cacggatagg
     1621 aagaataagc accaaggaac gggaaaattg cgtatggctg aaaagacgac ttttttatta
     1681 tacaacaccg tttttttcat cgttgctggc ccttcataag gggccaagat taccggatga
     1741 ctaataatga atatactatt tacggaatca tcaccgaata taggtggtca ggaattacag
     1801 gctgttgctc aaatgaaggc cctgaagaaa atggggcatt cagttctgct tgtctgcagg
     1861 gagaacagca aaattgcttt tgaagccagt aagtttggaa ttgatatcac attcgcgtta
     1921 tttcgaaaca gtcttcacat tcctactgta tggagattac tcggaatagt tcatagtttt
     1981 cagcccgatg caatcgtttg tcacagtgga catgatagta atattgttgg tttggtacgg
     2041 ttttttacct ggaaacatcc attcagaatt atcaggcaaa agacatattt gacacgaaaa
     2101 acaaaatttt ttcaataaat catttttgcg atgaggtgat tgttcccgga acaaatatga
     2161 agacacatct ggagcaggaa ggatgtcgaa ctcgggttac tgttgtgcct cctggctttg
     2221 atttccagga attatacgtt gattcccgaa acagtttgcc tccgagtgtt ctttcctggc
     2281 tggcgtcccg aagaggatgc cccgtaattg ctcaggtagg aatgttgcgc ccggaaaaag
     2341 ggcacgaatt t
//
LOCUS       DADMIB010000308         2315 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.316, whole genome shotgun sequence.
ACCESSION   DADMIB010000308 DADMIB010000000
VERSION     DADMIB010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.316"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(46..382)
                     /locus_tag="JNZ89_004427"
                     /pseudo
     CDS             complement(46..382)
                     /locus_tag="JNZ89_004427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502602.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(915..1241)
                     /locus_tag="JNZ89_004428"
     CDS             complement(915..1241)
                     /locus_tag="JNZ89_004428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938066.1"
                     /translation="MFKYAEMLMAEEDNKVCELIFKQQDNLILKINDRFPRIIIKKYR
                     TLQGKVVWLWILPFVIEWLILCALGVNSWRGKSKYLDYYLLRDEMPVRLVSIIFPTLL
                     ALFLLA"
BASE COUNT          762 a          446 c          402 g          705 t
ORIGIN      
        1 aaatatgaaa agatggttta aataccccgt tacttttgac ttacactata cggtatcgca
       61 tcgtttaata ttcgcaccgg ccagattttt atttctatta gttgtcacaa tactgaatgc
      121 gtacgaccac agtattctgg ctcctgtgtg gtcatgcttt aattctgcgt tccggacaga
      181 taagcagttg cttgcaggaa tccttcttgt gttaatgtca gttccccttt ttaccagtgc
      241 tgatttccac attccgtcca acagagctta tagcctttcc ctggattata gcattgtccg
      301 gctgaagttc tttttgaata ataatagaag cactgctggc agatccagtc cgtttttcat
      361 aacccactgt actgataacc ataatctaat cagtagaaat tgagtcgaaa ataagcacta
      421 ctccatacag gataattaga ggtcagtttg attattcaca attcattatc agcattttct
      481 gtttctgacg aaatcaacat gaaaagaacc atatatgata attattataa taacggcttt
      541 aattggaata catatattac aacgtattat atataattgg tattctggga actatattct
      601 caaaatacag tagaaacgag gtatgtttct ggtggaaagg acagtgggat taaaaagtaa
      661 gaattgataa aaaaacgcca gcaacacata gtgccggcgg agggaatacc ccatggagaa
      721 aatgtgatgc ctagagcacc atgaatatat aattaaaaat agttagagtt gtcaatactt
      781 tcacaaaaat aattttcgta gtttcgtagt atagaaagat atttttatgc atgacctacc
      841 tgaatttgct ccgggtagag gttataaata aaaattgaat cacgacaaac acaatattca
      901 tagtatggcg atgcctacgc cagcaagaat agcgccaata atgttgggaa tataatagac
      961 accagacgca caggcatctc atctcttaac aaataataat caaggtattt acttttgcct
     1021 cgccagctgt ttacgcctaa agcacacaag attaaccatt caataacaaa tggcaatatc
     1081 catagccata cgactttacc ttgtaatgtt cggtatttct ttataattat tctgggaaat
     1141 ctatcattta tttttaaaat caaattatct tgttgtttaa aaataagttc acatacttta
     1201 ttatcttctt ccgccatcaa catctctgca tacttaaaca tttcagaacg ttcctttagc
     1261 acagaagagt aattatatgt ccagttccca ggcaataatg cttatggata tttaactaat
     1321 aatttagaga atattttgca ataatatttg gctgtattca gaaatacctg aaaaatcata
     1381 ctatacagcc ccagggaatg gataaagatt ctaacaaagc atttcaacaa tatatgcttg
     1441 ttaaaaatcc atatcgaaat gccgttgcag cattaatata tgcctcattc ataaaatgta
     1501 aaagagcaag ctcgtaccag taggggggaa attcattgac atgtcctgtc aatacgtaca
     1561 gagccctgtc atgcttgcca gcacgtaaca attccgtccc cagtaaccag cgtgtcccct
     1621 gattattctc agggttatat gttagtattt tatcaatgag tataacggca tcctgatgac
     1681 gctgtaaatg aacattcgcc agaattgcag cataaagagc gcaaatgcat atgccagatg
     1741 agcgtgaata tcaatgatgt caggagcatg tcaggcaaga cgcctgagtt tgttgacgta
     1801 atttgtttcg tttatttcat cactatcgta tgcgtcaaga gttttttcaa actcatcccg
     1861 aaatgggcca agcctggttt caggaaataa gaaatacccc tagttattgt tcacttaaaa
     1921 gtataatttg taattcaaat cctgagcctg taaaacgggg agtaacatat tctattctga
     1981 agagaataaa agtcgtgatg cgatgtatca agcccggatt gtaatcccag attaacatag
     2041 atcacaaaac aacttattct tcactaacgt gaagataaat atcgttgtat gccttatcac
     2101 gactacgaat accagcaaga tacaactgac atacggaaag ataccatgtt ttttactccc
     2161 gaaaataacg ctaaaaagct acttccccat cgtttgtcct tagtattgtc agcgccaaca
     2221 atgtgggctg acatgataaa gctgtctagg aaaacgttcg cctcctcagc ggacaatcca
     2281 aatggtgatt gtccctatta aacgtttatt ttgaa
//
LOCUS       DADMIB010000309         2303 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.317, whole genome shotgun sequence.
ACCESSION   DADMIB010000309 DADMIB010000000
VERSION     DADMIB010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.317"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..117
                     /locus_tag="JNZ89_004429"
     CDS             <1..117
                     /locus_tag="JNZ89_004429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000184721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraD"
                     /protein_id="HAY8938067.1"
                     /translation="SAAELVGTLAGIAELPHNHPKWQEWEKRGKELLTKNSA"
     gene            complement(311..1246)
                     /locus_tag="JNZ89_004430"
     CDS             complement(311..1246)
                     /locus_tag="JNZ89_004430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009440807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication protein"
                     /protein_id="HAY8938068.1"
                     /translation="MSAALQYFEENLPHRPYHTDDLAFGLRISGKGRALLARYIQQNQ
                     PHAQFWLVFDVDRVGAAIDWSDRNAPAPNITVKNPENGHAHLLYALNLAVRTAPDASV
                     KALKYAAAIERALCEKLDADVNYSGLICKNPFHLEWQVMEWREEAYALDELADYLDLR
                     ASERRSVDKHYGLGRNCHLFEMTRKWAYRAIRQGWPAFSQWLDAVIQRVEMYNASLPV
                     PLSPPECRAIGKSIAKYTHRNFTPESFAQYVADTHTPEIQAKRGRKGGIAKGEAYDDK
                     RFMALCMLENGYSQKAIAAMLNVHRNTIRNWAMHK"
     gene            1758..>2303
                     /locus_tag="JNZ89_004431"
     CDS             1758..>2303
                     /locus_tag="JNZ89_004431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001360357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938069.1"
                     /translation="MGKMNINFKHILPLLSSFFISGCDPDGISKVKSFVYYDIDDSMT
                     VGKAFDTRSDCINGTWSEKEDNRGRTIVTYTCDISESGLKIINSAIMQEPEDKAEYSI
                     TQNNNSIKSTNESLEEYKQKTPLVEKTKEVIIDHIRKLNSAFNEDPMIYSKLTISPYL
                     DRMLYLKDHNDNALNEICGGYE"
BASE COUNT          659 a          559 c          527 g          558 t
ORIGIN      
        1 agtgctgccg aactggtagg cacactcgca ggaatcgcag agctaccgca caaccatcca
       61 aaatggcagg aatgggaaaa acgcgggaaa gagctactca ccaaaaacag tgcgtaagag
      121 cctccgttca cgttccggtt ccctggtgct tcctcgctca ttcgctcgct acgctcggtc
      181 atgagactgc ggcgagcacg accacctcaa tcatacggta agccgcacca ttgctgggct
      241 gaaaggagaa aaccgccgga aagcccgctg ctcaaaaaga cgccgaaaag gcgctgttat
      301 ctgatatagg ctatttgtgc attgcccaat tacggatcgt attacgatgt acattcagca
      361 tcgccgcaat agctttctga gaatatccat tctccagcat acatagcgcc atgaaacgct
      421 tgtcatcgta ggcttcgcct ttagcgatgc cacctttccg gcctctcttg gcctgtattt
      481 ctggtgtgtg cgtatcagcc acatactgtg cgaaactttc cggcgtgaag ttcctgtgcg
      541 tgtatttcgc aatgctcttg ccaatagccc gacattcagg cggagaaagc ggaacgggaa
      601 gcgatgcgtt gtacatttcg acacgctgaa tcacagcatc aagccactgt gagaatgctg
      661 gccagccctg acgaatcgcc ctgtaagccc atttgcgcgt catttcgaac agatggcagt
      721 ttcgccccag cccgtaatgt ttatcgacgc tacgacgctc tgaggctctc aaatcgagat
      781 aatcagccag ttcatcgagg gcgtaggctt cctcgcgcca ctccatcacc tgccattcca
      841 ggtggaacgg atttttgcaa atcagtccgc tgtagttcac atctgcgtca agtttctcac
      901 acagcgcacg ttcaattgca gcggcgtatt tcagcgcctt aaccgacgca tcaggcgcgg
      961 ttctcacggc aagattgagc gcgtagagca ggtgagcgtg cccgttctcg ggatttttta
     1021 cggtgatgtt cggcgcgggg gcgttccggt cgctccagtc aatcgcagct cctactcggt
     1081 caacgtcaaa aaccagccag aactgcgcat gaggctgatt ttgctggatg tagcgagcaa
     1141 gcagcgcacg ccctttgccg gagatacgaa gaccgaaagc gagatcatcc gtgtgatagg
     1201 gacggtgggg taaattttct tcgaagtatt gaagcgcggc gctcatgtgt tacgattcct
     1261 tctaggttat cgaccgacat cgcccctgta ttttcgtgaa agtcttggcg gatagacacg
     1321 aatttcaggg gcgtttgttt ttcagtcgct tacactaccc ccaacgacaa aacctgtcga
     1381 gccttcccgc aaaatcgatc catttaccat aactcccgtt gtgcgccccc cttaaaacgc
     1441 cctcagtcgc tttctggcgc aaaaaacgta aaaagacagg gaaacaacag gccagaccaa
     1501 aaaaacgcgc cagaattgtt ttcagggggc tgcataacta tgcacgaaag cgattcatgt
     1561 ccggtttcac tcgttttgaa cagcgaacag gtcaaaacag caaactttct catccagaaa
     1621 aaggtgaact ggtgcgaaat cttttcgaac tgcgtaagac gttgagcaca aacatagtaa
     1681 gtcggtttat cggtatgtat ggattccatt aacatatcgc ctgtattaat atttcctcgt
     1741 tattgttaga aataaaaatg ggaaaaatga atattaactt taaacatatc cttcctttat
     1801 tgtcgtcatt ttttatttca ggatgcgacc ctgatggaat aagcaaagta aagtctttcg
     1861 tatattacga cattgacgac tcaatgactg ttggtaaagc cttcgataca aggagtgatt
     1921 gcatcaatgg cacatggagt gaaaaagagg ataatcgagg cagaaccatc gtcacatata
     1981 cctgtgatat tagtgaaagt ggcctaaaaa taataaattc agccattatg caagaacctg
     2041 aagataaggc tgaatattct ataacacaaa ataacaacag cataaaatca accaatgaat
     2101 cactagagga atacaaacag aaaacgcctc tagtggaaaa aacaaaagag gtcataatag
     2161 atcatataag aaagctaaac agtgctttta atgaagatcc aatgatatat agcaaactca
     2221 caattagccc ttatttagac agaatgctat atctaaagga ccataatgac aatgcgctaa
     2281 atgaaatttg tggtgggtac gaa
//
LOCUS       DADMIB010000310         2283 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.318, whole genome shotgun sequence.
ACCESSION   DADMIB010000310 DADMIB010000000
VERSION     DADMIB010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.318"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..184
                     /locus_tag="JNZ89_004432"
     CDS             <1..184
                     /locus_tag="JNZ89_004432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HAY8938070.1"
                     /translation="IYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFM
                     ETVSPFPGGKHGLAKV"
     gene            complement(204..455)
                     /locus_tag="JNZ89_004433"
     CDS             complement(204..455)
                     /locus_tag="JNZ89_004433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001119656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938071.1"
                     /translation="MPGTTTAMSINFIGITARTMNSNGSHGKPQIPVDYQKLLSIEDI
                     TFCRNRWGNIGENALRRVAVGKKLSFFGSDRGGENAAII"
     gene            378..1068
                     /locus_tag="JNZ89_004434"
                     /pseudo
     CDS             378..1068
                     /locus_tag="JNZ89_004434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(1085..1264)
                     /locus_tag="JNZ89_004435"
                     /pseudo
     CDS             complement(1085..1264)
                     /locus_tag="JNZ89_004435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1595..>2283
                     /gene="ipaH7.8"
                     /locus_tag="JNZ89_004436"
     CDS             1595..>2283
                     /gene="ipaH7.8"
                     /locus_tag="JNZ89_004436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH7.8"
                     /protein_id="HAY8938072.1"
                     /translation="MFSVNNTHSSVSCSPSINSNSTSNEHYLRILTEWEKNSSPGEER
                     GIAFNRLSQCFQNQEAVLNLSDLNLTSLPELPKHISALIVENNKLTSLPKLPAFLKEL
                     NADNNRLSVIPELPESLTTLSVRSNQLENLPVLPNHLTSLFVENNRLYNLPALPEKLK
                     FLHVYYNRLTTLPDLPDKLEILCAQRNNLVTFPQFSDRNNIRQKEYYFHFNQITTLPE
                     SFSQLDSSYRI"
BASE COUNT          677 a          514 c          429 g          663 t
ORIGIN      
        1 catttatcag ccggtttact cgccatgggt gaatcatgtt gaacggctat ggcaggcact
       61 tcacgacaca ataacgcgta atcatcagtg ccgctcaatg tggcaactgt tgaaaaaagt
      121 tcgccatttt atggaaaccg tcagcccatt ccccggaggc aaacatgggc tggcaaaagt
      181 gtagcggtat taagcgcagc tatttagatt attgccgcat tttctccacc acgatcagag
      241 ccgaaaaaag ataatttttt tccaactgcc acccggcgta atgcgttttc accaatgtta
      301 ccccacctat tgcggcaaaa ggtaatgtct tcaatcgata gaagtttctg gtaatctact
      361 ggtatttgag gttttccatg actaccgtta ctgttcattg tccgcgctgt aattccgatg
      421 aagtttatcg acatggccgt agttgttccc ggcatgagcg tttccgttgt cgctcatgta
      481 aacgtgtttt ccagctcact tactcttatg aagccagaaa actcggcgtt aaggagcaga
      541 tcgttgaaat ggcacataac ggcgcagggg gctgttatac cgccagaaca ctgaaaatcg
      601 gcatcaatac cgtcatacgg acattaaaaa gctctcgccc cggcggataa catctgcgcc
      661 agtcgctcac gctgatgttg cccttatctg tgaacttgat gagcagtggc gcttcgttgg
      721 cagcaaggcg caacaacact ggccctggta tgcgtacaac actaaaactg gcggtgtgtt
      781 ggcttacact tgcgggccac ggaatgatga gacctgtcgg gaactgttag ccctgttgac
      841 tccgttctgt atcggcatgg tgaccagcga tgactggggc agctacgcca gagaagtgcc
      901 ggaggagaaa cacctgaccg gcaaaatctt cacgcaacgt atgaacgtaa caacctgacc
      961 ctccgccccc gcatcaagcg gctggcacgt aaaacaatct gcttctcgcg ttccgtggaa
     1021 atccacgaaa aagtcatcgg ttccttcatt gaaaagcaca tattctaatg attggaagta
     1081 ctacccggca aaactcattc agtgcattcc agtgattcag gatatagttg aacgccttta
     1141 ccatttcagc atggtttgac aaagttttcc tctggagctt tatccagtca tacaaggact
     1201 tcattcgcgg cacacatttc tcctgcctta ccgcaagccg tttttctgcc ggcctccctc
     1261 atattaaatg tgtatcgttt ttttacagta attttaattt atcattctat aataggaata
     1321 aatgagcttg gctaaaatat gatgtaaaac aaatatactt actcggatta catttccttg
     1381 ctcactggaa tgttgaattc agtgttatta ttgactgcag tcacaataaa aaaaaagaat
     1441 tccatagaaa acctcaacaa ataaattaca actaacttct gttatgtgta aaatggaaac
     1501 tattaaaact taatatcgaa aatggtaagt gaaatttgta taaatataca attttaaata
     1561 tttattctca caaatataag gttgccctag cattatgttc tctgtaaata atacacactc
     1621 atcagtttct tgctccccct ctattaactc aaactcaacc agtaatgaac attatctgag
     1681 aatcctgact gaatgggaaa agaactcttc tcccggggaa gagcgaggca ttgcttttaa
     1741 cagactctcc cagtgctttc agaatcaaga agcagtatta aatttatcag acctaaattt
     1801 gacgtctctt cccgaattac caaagcatat ttctgctttg attgtagaaa ataataaatt
     1861 aacatcattg ccaaagctgc ctgcatttct caaagaactt aatgctgata ataacaggct
     1921 ttctgtgata ccagaacttc ctgagtcatt aacaacttta agtgttcgtt ctaatcaact
     1981 ggaaaacctt cctgttttgc caaaccattt aacatcatta tttgttgaaa ataacaggct
     2041 atataattta ccggctcttc ccgaaaaatt gaaattttta catgtttatt ataacaggct
     2101 gacaacatta cccgacttac cggataaact ggaaattctc tgtgctcagc gcaataatct
     2161 ggttactttt cctcaatttt ctgatagaaa caatatcaga caaaaggaat attattttca
     2221 ttttaatcag ataaccactc ttccggagag tttttcacaa ttagattcaa gttacaggat
     2281 taa
//
LOCUS       DADMIB010000311         2276 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.319, whole genome shotgun sequence.
ACCESSION   DADMIB010000311 DADMIB010000000
VERSION     DADMIB010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.319"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..350)
                     /locus_tag="JNZ89_004437"
     CDS             complement(<1..350)
                     /locus_tag="JNZ89_004437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inhibitor of g-type lysozyme"
                     /protein_id="HAY8938073.1"
                     /translation="MKIKSISKAVLLFALLTSTSFAAGKNVNVEFRKGHSSAQYSGEI
                     KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLP
                     ASGKYELRVLQTRN"
     gene            592..885
                     /locus_tag="JNZ89_004438"
     CDS             592..885
                     /locus_tag="JNZ89_004438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938074.1"
                     /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMIL
                     PLDGRKKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK"
     gene            957..1616
                     /locus_tag="JNZ89_004439"
     CDS             957..1616
                     /locus_tag="JNZ89_004439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HAY8938075.1"
                     /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF
                     IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL
                     TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQG
                     TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV
                     L"
     gene            1693..2154
                     /locus_tag="JNZ89_004440"
     CDS             1693..2154
                     /locus_tag="JNZ89_004440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415699.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HAY8938076.1"
                     /translation="MAEHLMNDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDED
                     TDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLA
                     EGKDLPVWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ"
BASE COUNT          594 a          490 c          585 g          607 t
ORIGIN      
        1 tcgtttcggg tttgcagcac tcgcagctca tatttgccag aagcagggag tgagtattgt
       61 ccgtgactat cgagttctgg ggaatatctg gataaatcaa cagaatcatc gattcctggc
      121 ccgaagaggt aagtatcagc gccttcatta gagatactca catgtacttt ctgacctttt
      181 ttggcataga aggtatatgt atcgtaatcg tatcccttta tttcgccgga gtactgagcg
      241 ctgctatggc cttttctgaa ctcaacattg acattcttac ccgcagcaaa gctcgtggag
      301 gttagcagtg caaacagcaa tacagcctta ctgatgctct tgattttcat tggtagtctc
      361 ctgttcagaa tgagtacgat gaactgttat aatataacaa tccctaacgg gagaattcca
      421 gtggcttttc tgcgttcggt aaaatcccgg cgcggcattt tttgccggtg ggattactta
      481 taaaggggca tggactcaac aaaccgcaga aatctacagc tggctggctt gtggcgcggg
      541 tttcattgat gttagcttat gccaaaacct ggcatcttaa aaagtaaaag tatgttttgt
      601 gtgatttatc gaagcagcaa gcgtgaccag acctatttat atgtcgaaaa aaaagacgat
      661 ttttcgcgtg ttcctgagga actgatgaaa ggttttggtc agcctcagtt agcgatgatt
      721 ctgccgttgg atgggcggaa gaaactggtc aatgctgata ttgaaaaggt taaactggca
      781 ttaaccgagc aaggttacta tttgcagtta ccgccaccac ccgaagattt gctgaagcaa
      841 catctttccg tcatggggca gaaaacagac gacacgaaca aataaccgat atccggcggt
      901 ggcattatct ttgtcggcgc gggttttcat atccacgata aggtgagggg aacgttatgt
      961 atcaacatca caactggcaa ggtgcgctgc tggattatcc ggtgagtaaa gtagtctgtg
     1021 ttggcagtaa ctatgccaaa catattaaag agatgggcag cgcagtgccc gaagagccag
     1081 tgctgtttat taaaccagaa acggcactgt gcgatctgag gcagccattg gcgatcccat
     1141 ccgatttcgg ttcagttcat catgaagtcg aactggcggt gttgattggt gcgacgctgc
     1201 gtcaggcaac ggaagagcat gtccgcaaag ccattgccgg ttacggcgtg gcgcttgatc
     1261 tgacattgcg tgatgttcag ggaaaaatga agaaagccgg gcagccgtgg gaaaaggcta
     1321 aagcgtttga taactcttgt ccgctttccg ggtttatccc cgcggcggaa tttaccggcg
     1381 atccacaaaa tacaacgctg ggcctgagcg taaacggcga acaacgccag caaggtacga
     1441 ctgcggacat gatccataaa atcgttccgt tgatcgctta tatgagcaag ttttttaccc
     1501 tcaaggccgg tgacgttgtg ttgacaggca cgcctgatgg cgtcggcccg ttgcaaagcg
     1561 gtgatgagct gacagtcact ttcgatgggc attctttgac aactcgcgtt ttgtaatact
     1621 ttttgccgcc tgaaagcggc ggcaaaactt gcatcgctgt gccagactgg ttataaggtg
     1681 cgttttaacg taatggcgga acacctgatg aacgatgtac ctttctggca aagtaaaacc
     1741 ctggacgaaa tgagcgatgc ggaatgggag tcgttgtgtg atggttgcgg tcagtgttgc
     1801 ctgcataaac tgatggatga agacaccgac gaaatctact tcactaacgt cgcctgtcgc
     1861 cagctcaata ttaaaacctg tcaatgtcgg aactacgaac gtcgtttcga gtttgaaccc
     1921 gactgcatta aattaacccg tgaaaatctg ccaacattcg aatggctgcc aatgacctgc
     1981 gcttatcgtt tgctggcgga aggtaaagat ttacctgtgt ggcatccgct acttactggt
     2041 tcgaaagcgg caatgcatgg tgaacgtatc tctgtgcgtc atatcgcagt gaaagaatca
     2101 gaagtgattg actggcagga tcatatctta aataaacctg actgggcgca gtgataaatt
     2161 taatagatgt tgatgggggc tttcttaata tacgtctgga tgctcgccat ttcgtagccc
     2221 tgtttttgaa agcgctctgt cataatgaga gttacccgat accttattat caacag
//
LOCUS       DADMIB010000312         2267 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.320, whole genome shotgun sequence.
ACCESSION   DADMIB010000312 DADMIB010000000
VERSION     DADMIB010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.320"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            324..1976
                     /locus_tag="JNZ89_004441"
     CDS             324..1976
                     /locus_tag="JNZ89_004441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858318.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HAY8938077.1"
                     /translation="MIPLKKNITLIMFTLSLLTGNPAIAYETDKVYKITVLHTNDHHG
                     HFWRNNHGEYGLSSQKTLVDNIRQKVINNGGSVLLLSGGDINTGVPESDLQKAEPDIR
                     GMNLIGYDAMAVGNHEFDNPLNILRQQEKWATFPFLSANIYQKSTGRRLFSPWKIFTR
                     QNLKIAVIGLTTDDTAKTGNSEYFTDIEFRQPAAEARSVIDELNQQEKPDIIIAATHM
                     GHYDNGESGSNAPGDVEMARSLPTGSLAMIVGGHSQAPVCMASDNKKQWNYIPGTTCV
                     PDKQNGIWIVQAHEWGKYVGQADFEFCNGTMKLVNYQLHPVNLKMRITREDGKTEFSF
                     YTPEITEDPQMLSLLTPFQNKGKAQLDVKVGVVNGRLEGDRSKVRFVQTSMGHLILSA
                     LTERIDADFAVVSGGEIRDSIESGNITYKDILKVQPFGNTVVSIDLTGKEVADYLATV
                     AQMKPDSGAYPQFLNTSFVVKKGKIEMLKIKGKSVDLNKKYRMTTFSFNATGGDGYPR
                     IDNRPGYINTGFIDAEVLIEYIREHSPLDAASYEPKGEVSWQ"
     gene            complement(1963..2163)
                     /locus_tag="JNZ89_004442"
     CDS             complement(1963..2163)
                     /locus_tag="JNZ89_004442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938078.1"
                     /translation="MTKKLAALQHQLSRKVKFSNNRQKQKHKIQQLHSHIANIRRDYF
                     HKVTATVSKKHVMIVNYVITAN"
BASE COUNT          702 a          422 c          529 g          614 t
ORIGIN      
        1 tctccaggaa acttggggcg gttcacgtca gtatcagacc atattaattg ctgaaactga
       61 taaacatcaa accttataga agggtgaatg ctgaaagggg gctatggtga tcgacgtgat
      121 gacaacgaca ggtaagaccg tgacctgata aacctgaatt gtgtcctaga cataaagtcg
      181 gtgaagggaa taaggctcag gtcatcgaat cttatagtgg cccgcagctc tgactgcaat
      241 aaggccggat acagagcagc aactactcgt cgatgtcaga acaacggaag ccttgcaaac
      301 ggggatgcgt tcatacaggt acaatgatac cgttaaaaaa aaacattacg ctaataatgt
      361 tcaccctgtc attactgaca ggaaatcctg ctatagcgta tgaaacagat aaagtatata
      421 aaataaccgt tctgcataca aatgaccacc atggacactt ttggcgtaac aatcatggtg
      481 agtacgggtt atcctcccaa aaaactctgg tggacaatat ccggcagaaa gtaataaata
      541 atggcggaag tgttctatta ttatctggtg gtgatattaa caccggtgta cctgaatcag
      601 accttcagaa ggctgaaccc gatattcgtg gaatgaatct aattggttat gatgcaatgg
      661 ccgtcggtaa tcatgaattt gataatcctc taaatatatt acgtcagcag gaaaaatggg
      721 ccacatttcc tttcctttct gctaacatat atcaaaaaag tacagggagg cgtttattca
      781 gtccatggaa aattttcacc cgtcagaatt tgaaaattgc agtcattggc ttgacgacag
      841 atgatactgc gaaaacagga aattctgaat attttactga tattgagttc cgtcaacctg
      901 ctgctgaggc gaggagtgtc attgatgaac ttaatcagca ggaaaagcca gatattatta
      961 ttgcggcaac acatatgggg cactatgaca atggcgagtc aggttcgaat gctcctggtg
     1021 atgttgaaat ggctcgcagt ttgccgactg gctcattagc aatgattgtg ggaggacatt
     1081 cacaagctcc tgtctgcatg gccagcgata acaaaaaaca gtggaattat attccgggga
     1141 caacctgtgt accagataaa caaaatggca tctggattgt acaagcgcat gagtggggaa
     1201 aatatgtcgg tcaggctgat tttgaattct gtaacggtac aatgaaactg gttaattatc
     1261 agttacaccc agttaatctc aaaatgagaa ttaccagaga agatggaaaa acggaatttt
     1321 ctttttacac ccccgaaatt actgaagatc cacagatgtt atccttactg acaccattcc
     1381 agaataaagg caaagcacaa ctggatgtga aggttggggt tgtgaacgga cgtctggaag
     1441 gggacagaag taaagttcgt tttgttcaga ccagtatggg ccatctgatt ctgagcgctc
     1501 tgacagaacg tattgacgca gattttgctg ttgtgagtgg tggggaaatt cgagattcca
     1561 tagagagtgg taacatcaca tacaaagata tactgaaagt tcagccattt ggtaatacgg
     1621 tagtaagtat tgatttgacg gggaaagaag tagctgacta cctagctaca gtggcacaga
     1681 tgaaaccgga ttccggagcc tacccacaat ttttgaatac cagctttgta gtcaaaaaag
     1741 gaaaaatcga aatgctaaaa ataaaaggta aatcggttga ccttaacaaa aaatatcgta
     1801 tgacaacatt tagctttaat gctactggtg gggatggcta tccacgtatt gataatagac
     1861 ccggatacat aaataccgga tttattgatg ctgaagtact tatcgaatat atccgggaac
     1921 attcaccgct ggatgctgct tcatatgaac caaaaggtga agtcagttgg cagtgataac
     1981 gtaattgacg atcatcacgt gttttttgct gacagtcgct gtgactttgt gaaagtagtc
     2041 tctgcggatg tttgcgatat gggaatgcag ttgctgtatt ttgtgtttct gcttctgcct
     2101 gttgttgctg aatttaacct tgcggcttaa ctgatgttgg agcgctgcca gcttcttcgt
     2161 caatttcgct gattaaagtt tattcattat ggcatgatct gcgtaagcgg ctcgtcagaa
     2221 ccgtattgat atttactaag agctcagatc aactttccag ggcaaca
//
LOCUS       DADMIB010000313         2260 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.321, whole genome shotgun sequence.
ACCESSION   DADMIB010000313 DADMIB010000000
VERSION     DADMIB010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.321"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            111..432
                     /locus_tag="JNZ89_004443"
                     /pseudo
     CDS             111..432
                     /locus_tag="JNZ89_004443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001232281.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(466..672)
                     /locus_tag="JNZ89_004444"
     CDS             complement(466..672)
                     /locus_tag="JNZ89_004444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001570270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938079.1"
                     /translation="MTVSYKITYEHRDGDQIRMEEVLFHSEHEPTKDEIHDAVRKDTV
                     RFNSPSNGVTAVSGFKVISVVPVP"
     gene            complement(1170..1243)
                     /locus_tag="JNZ89_004445"
     tRNA            complement(1170..1243)
                     /locus_tag="JNZ89_004445"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1209..1211),aa:Gly,seq:ccc)
     gene            complement(1322..2077)
                     /locus_tag="JNZ89_004446"
     CDS             complement(1322..2077)
                     /locus_tag="JNZ89_004446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HAY8938080.1"
                     /translation="MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTV
                     KRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTT
                     KTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYA
                     AGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKTGQKIATMGST
                     DAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
BASE COUNT          603 a          530 c          491 g          636 t
ORIGIN      
        1 tcatacacta aatcagtaag ttggcagcat taccaatttt gctaagttaa tgcattaatc
       61 taaaaacgct ttaaatcaat acataaccat tatctcttgg gattatttac atgcgcaaaa
      121 gtttaatgct gttacttgct tcaacattga ttatttctgg atgtgcaaca aaaaaacaac
      181 tcgttccaac tggtggaagc aaatcagacg gcacagttag gatgagttat tcttacggta
      241 tgtttgaaag tcctgttgta gatccacaac aaggcatgaa tgcagccaaa gcgcgttgtg
      301 ccgcttaggg gatattcagg agccgagcct tttggtggat tcacttctca atgttcacaa
      361 ccttcttcat ctggttgtat gcaaacactt gtgactatcg aatatcaatg cactggcgat
      421 attaagaagt aataattagg ggcttccagc cccttctata accattcatg gaacagggac
      481 aaccgaaatc actttaaacc ctgaaacagc cgttactcca ttagatggag aattaaatct
      541 cacagtatct tttcttactg catcatgaat ttcatctttt gttggttcat gctctgaatg
      601 gaataaaacc tcttccattc taatttgatc accgtctcta tgctcataag taatcttgta
      661 gctaacagtc atatcaacct catgcagggg aattgtgaga ttattataga caatagaaac
      721 cataaagccc cgttggtgat acagcaacaa gcgggagcgt agcgacttca tcagattgtc
      781 agaaagatca caccttatca ggataaccgt gtacccgttg ggagcgtggc tgaaacgctg
      841 atagagcttg catatggttt gcaaggacca atatcaccat aaacctgttt acgcagccac
      901 aaggccgcac atcgggctta aatgcgtgtg ttcagtctgt cgatgacatt acaatgccag
      961 gatgggcttt atcttcacgt tgtgctatcg cggtgtgaga ggtgcaactg ccgccaacgt
     1021 taggttatac tgtcatctca ccgtgtaact taacgtgaca gttactaagg gcggatcaca
     1081 atggtagaac tcctaagcaa attaaatagg taactgttta agttgctgac agagaagact
     1141 tttttagtct tctccacctg gggagattct ggagcgggcg aagggaatcg aaccctcgta
     1201 tagagcttgg gaagctctcg ttctaccatt gaactacgcc cgcttcgaga tgcgtaaggc
     1261 attataaacc ttacgctctc cttagcaagt gccgcgctgc tgactgctga ttaattcgcc
     1321 atcagcattt tggcttgctg ccctgcggcg gcaagtaacg tagcggatca attgccgttg
     1381 cacggtaacg aatctggaaa tgcaggcgaa cagatgccgc atccgtgctc cccatagtgg
     1441 cgattttttg cccagtcttc acgctttgcc cattatttac cagcatcgtg tcattatggg
     1501 cgtaagccgt aatgtaatct tcactgtgtt taatcatgat gagattaccg tagccacgca
     1561 gctggttgcc cacatacacc acctttcctg cacccgcggc gtaaataggt gtaccccgtg
     1621 gagctgagat atcaatccct ttattgccgc catctgctgt cgaatacggc atgataactt
     1681 tccctgtcgt tggccataac caacaacgtt gccctactgg cggccaggaa gatttcggta
     1741 ccgctgatga cggtgtaacc gatgcggttt tggtcgttga tttggcggtt gatttacgtg
     1801 tactactgct acttttcgcc ccacccagtt ttagtttctg accaacttca atggtgtaag
     1861 ggggggaaat gccgttcagt cgcgccagtt cttttacgct ggttcccgtg gtgcgcgaaa
     1921 tacgatatag cgtatccccc cgtttcacgg tgtaaacgga gccggaatat gttcctgtat
     1981 cggatgattt gctacccgaa cagcccgcca aaagcagtcc aaccgataac aacatcacga
     2041 tacccagaga ttttttattc aggcgtcccg cactcaaaat ctttcctcgc ttaaaaaaca
     2101 agacgcctta tcatagcagc cagcctcttg atacccaatc tcttgcttct ggaaaaacgt
     2161 ggtaatagag aaagaggtta atttcatttg gcaaagggaa gtatcatcag caaaatattc
     2221 gctgtagagg tatcgaactt cctgactttt taccctattt
//
LOCUS       DADMIB010000314         2250 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.322, whole genome shotgun sequence.
ACCESSION   DADMIB010000314 DADMIB010000000
VERSION     DADMIB010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2250
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.322"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(25..2241)
                     /gene="pdeF"
                     /locus_tag="JNZ89_004447"
     CDS             complement(25..2241)
                     /gene="pdeF"
                     /locus_tag="JNZ89_004447"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeF"
                     /protein_id="HAY8938081.1"
                     /translation="MKLNATYIKIRDKWWGLPLFLPFLILPIFAHINTFAHISSGEVF
                     LFYLPLALMISMMMFFSWAALPGIALGIFVRKYAELGFYETLSLTANFIIIIIIIIII
                     IIILCCGGYRVFTPRRNNVSHGDTRLISQRIFWQIVFPATLFLILFQFAAFVGLLASR
                     ENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRVVRNPFYLRSYYSQLKQQVDAK
                     VTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTLSLLLPLMMWGAMRYGYKLISL
                     LWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVFSFIVNYMAVLATRQRAVVRRI
                     QRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPGMEMLVKNYGIMLRIQYKQKLS
                     HWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITALDSHLKQFRFFWDGMPMQPQIG
                     VSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQRRGAMYLQRELKDKVAMMNRL
                     QQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDELISPDSFLPVAHEFGLSSSID
                     MWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARFPFEVSQLLAKYQIEAWQLIFE
                     VTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYASYARLKNVNADLLKIDGSFIR
                     NIVSNSLDYQIVASICHLARMKKMRVVAEYVENEEIREAVLSLGIDYMQGYLIGKP"
BASE COUNT          680 a          531 c          502 g          537 t
ORIGIN      
        1 ttcattcaac gtatcaatta acggctacgg cttaccaata agataaccct gcatataatc
       61 gatccccaaa gagagcaccg cctcgcggat ctcttcgttt tcaacgtact ctgccactac
      121 ccgcattttc ttcattcgcg ccaggtggca aatcgatgcc actatctgat aatccagact
      181 atttgacaca atattgcgga taaaactgcc gtcaatttta agcagatcgg cattcacatt
      241 tttaagccgt gcatagctgg cgtagccggt gccgaaatca tcaatcgcaa tctggcagcc
      301 taattcctga agatgctgca aggtgatttg cgcctgctta acattggtca gagcattact
      361 ttcggtgact tcaaaaataa gttgccacgc ttcaatctga tatttagcca gcaactgact
      421 gacttcaaaa ggaaaacgag cctgacatac cgaggttgga gacagattaa tagcaaaacg
      481 gtgagcgggc atcttcgctc tgttttcagc cataaattgc agcgtatgct caatgaccca
      541 catgtcgata ctcgacgata aaccaaattc gtgcgcgacc ggcaagaagc tatcggggct
      601 gatcagttca tcattctcac ctttcatgcg cagaagaatt tcatggtaaa catcaccacg
      661 cataccggta atcggctggg ccatcaggaa aaaatggttg tgttccagcg cctgctgtag
      721 tcgattcatc atcgcgactt tatctttcaa ttcgcgttgc aaatacattg ccccgcgacg
      781 ctgcatattt tccggggcgt tggtcacgat ggaaagttcg gcgaccgtat ttagctctcc
      841 cagcagcagg tagatatgat tcactggcga gcgcacatag cagtaactga cgccaatctg
      901 cggttgcatc ggcatgccat cccaaaagaa acgaaattgc ttgagatggc tatccagtgc
      961 ggtaatgcgc tcctggtgcg attctgtatt cagtcgcagc gcgagatcgt tacccgaaag
     1021 ctgataaaca tcttcacccg gttccagcaa gggtgacagc cagtgagaaa gtttttgctt
     1081 gtattgaatc cgcagcatga tgccatagtt cttaaccagc atttccatgc cagggatgcg
     1141 taaataacaa agcgcagacc agggggcatc acgcaacgcg cgattcaggg cgcgaacatt
     1201 tggcagatga accaccgggt ccacatacgc aagccgctga atgcgtctga ctaccgctct
     1261 ctgacgggtt gccagtacag ccatataatt gacaataaaa gagaatacca gataactgga
     1321 ggaggttatg gtcagctgcg tggtatagcc aggataaatg ggaatgtaat tttgatagct
     1381 gtggatgctg atcatcaaca cgaccgccca gagcagagaa atcagcttat aaccatagcg
     1441 catcgctccc cacatcatca ggggcagcaa taatgacaag gtataattgg tgctaaaaat
     1501 tgtgcttttt tcatttaacg gcatgcataa cagcaacaat aaagcaccta atgccagtag
     1561 ccagagcgcg aactcttttt tggtgacttt ggcatcaacc tgctgtttta attgcgaata
     1621 atagctacgt aaataaaatg gatttcgcac tacccgaatg atgaagtagc acagcgggac
     1681 accgatcaga ttacccacca gtaaggcctg ataattgatt aaagtcccga ggttaaaagg
     1741 catgacaccg accagatttt ctctgctcgc caataatcct acaaatgcag caaactggaa
     1801 aagtatcaga aacagcgttg caggaaacac aatctgccag aatatacgct gggaaattaa
     1861 acgggtatca ccatgtgaaa cgttgttacg ccggggagta aagaccctgt aaccgccaca
     1921 acagagaatg ataatgataa tgataatgat aatgataatg ataataaaat tagccgttaa
     1981 tgatagcgtt tcgtaaaaac ccagctctgc atatttgcgg acaaaaatcc ctaaggcgat
     2041 ccctggcaat gccgcccagc tgaaaaacat catcatgctg atcatcagtg ccagaggcag
     2101 ataaaagaga aaaacctcac cggaagaaat atgcgcgaaa gtattaatgt gggcgaaaat
     2161 gggcaagatt aaaaaaggca ggaacagcgg aagcccccac catttatcac gtatttttat
     2221 ataagttgca ttcagtttca tagatgctca
//
LOCUS       DADMIB010000315         2210 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.323, whole genome shotgun sequence.
ACCESSION   DADMIB010000315 DADMIB010000000
VERSION     DADMIB010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2210
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.323"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            62..226
                     /locus_tag="JNZ89_004448"
                     /pseudo
     CDS             62..226
                     /locus_tag="JNZ89_004448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001436458.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            720..1298
                     /locus_tag="JNZ89_004449"
     CDS             720..1298
                     /locus_tag="JNZ89_004449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938082.1"
                     /translation="MKVSFKSLGYIFHDIYNKKHTIDEFNDVVRKAVLSGKINELNAC
                     HKVAIFLAEKDNEITKKDKAKIIDTLTENYSIEFQQLMNISERTLNSSLYITPGESGF
                     VSFVNREGKICHTAYVKSSDNSMAYYHANYSSIDKYITDMCGLICMRHIESTCIIFYM
                     LDEKVLSAIAEFMNEKGWRAAFCSAKDLYKCV"
     gene            complement(1407..1665)
                     /locus_tag="JNZ89_004450"
                     /pseudo
     CDS             complement(1407..1665)
                     /locus_tag="JNZ89_004450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            1649..2210
                     /locus_tag="JNZ89_004451"
                     /pseudo
     CDS             1649..2210
                     /locus_tag="JNZ89_004451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343760.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          703 a          403 c          541 g          563 t
ORIGIN      
        1 gttgaataaa cgcgcattct tcggtgcttt tttaatcttt tggggattta aattcctatc
       61 gatgaactgt cgatatgaaa aagcgagcat catactgacg tcaaacaaag gggtcgcaga
      121 ctggggagaa atgttcggag atcacgtgct ggcaacagcg atcctagatc ggctgctaca
      181 cgctgaatat caaaggagag agttaccggt taaaagagaa acgtaaagct ggagtgctga
      241 ccaaaaacac aacgccaatc agtgatgatg aaatggtgga aaacggacag catcagtaac
      301 gaaagtatct tagcaggcat gaaaatcgtc cgcatcccct aaacggtcaa aatgcttctg
      361 ccgtgaagga gggagaatgc catctcatca cttatatctg gcgaatgaaa cacagatggt
      421 cggccttgcc cccaaacaca cggcggtgca aaatggaatg gcagaaaact tcgtcaaaac
      481 gatgaaatat gattaaatca gtgttatgtt cgaacctgac gtgttaacag cagtaaagta
      541 gtctcgcgaa ggtgttcaaa cattataatg aatggcatcc tcatagtgcg cagggttatc
      601 gcttgctgcg gaaatatctg aagcgacgta ccagtaatgg ggaaaatgat agctggtttc
      661 tgaaaatata gaggaaaatg tgatatatat atcctgttaa tatttaagga gaatataaaa
      721 tgaaagtctc gtttaagtct ttaggctata tttttcatga tatatataat aaaaaacaca
      781 ctatcgatga gttcaacgat gtggtaagaa aagcagtttt atcaggtaaa attaacgagc
      841 tgaatgcatg tcataaagtg gcaatttttc ttgccgaaaa agacaatgag ataacaaaga
      901 aagacaaagc caagataata gatacattaa ctgaaaacta ttccattgaa tttcaacaat
      961 taatgaatat tagtgagcgc acgttaaatt catctttata tattactcct ggtgaaagtg
     1021 gttttgtcag ttttgttaat cgtgaaggaa aaatatgtca tactgcatat gtaaaatcat
     1081 cagataatag catggcatat taccatgcaa attatagcag cattgacaaa tatattacgg
     1141 atatgtgcgg ccttatttgt atgaggcata ttgagtctac ttgcattatt ttttatatgc
     1201 ttgatgaaaa agttttatct gccattgctg aatttatgaa tgaaaaagga tggcgggctg
     1261 cgttttgttc agcaaaggac ttatataaat gtgtttaatt ttagaaaaac tatttggtaa
     1321 aatccaacaa gagtcgagag gttcgcgttg cttcagcagg gcctcagcct gttcaaccag
     1381 actcagttgc aggtcgtgac gcagatttag tggtggtggt tgattgtcag ataccagccg
     1441 atgatcttat agtgcatatc atcagacttt gagaagcata tggttttgcg ggtaagccgc
     1501 ttaagatgtg tccgcaggtt cagattatgt cgctctatcc gctgagtgca tttcttgctt
     1561 ataacatgac tggttgagga caataaagtt cggtataccg gctcaggcat cggtcatgta
     1621 gaagacaatg ctaaactggc tcagcaaact aagagcagcg cgcatccact tacccaatgc
     1681 ggttgagaaa atagccttcg atcgctttca tgtggcgaaa caaccgggtg aggtggtgga
     1741 taaaacccgc cagaatgaac atccgcatct tcctgttgaa agtcgtcgtc aggcaaaggg
     1801 aactcgcttc ctgtggcagc acagcgataa atggatgacc gaatccaggc aggaaaagct
     1861 gatatggctg cgtgcgcaga tgaagctgac gagcctgtgc tgggcgctga aagaactggc
     1921 aaaggatatc tggagcagac catggagcga ggaaagacgc aacgactggc agagatggct
     1981 gtcgctggcg gccaacagtg acgtccccat gatgaagaat gtggctaaaa cgatagggaa
     2041 aaggttgtac ggtatcctga acgccatgcg ccatggcgta tcaaacggaa atgcggaagc
     2101 actgaacagc aagatcaggc tgctgagaat aaaagccaag ggctaccgca accgggagcg
     2161 ctttaagctg ggagtgatgt tccactatgg gaaactgaat atggcgttct
//
LOCUS       DADMIB010000316         2177 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.324, whole genome shotgun sequence.
ACCESSION   DADMIB010000316 DADMIB010000000
VERSION     DADMIB010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.324"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(55..180)
                     /locus_tag="JNZ89_004452"
                     /pseudo
     CDS             complement(55..180)
                     /locus_tag="JNZ89_004452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415772.1"
                     /note="receptor for colicin S4; incomplete; partial in the
                     middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
     gene            366..641
                     /locus_tag="JNZ89_004453"
     CDS             366..641
                     /locus_tag="JNZ89_004453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001427490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HAY8938083.1"
                     /translation="MTVFVLRGYIPHTTAKSVVGIGVSDNITTHSRVCGFFCVKHCHI
                     RIMVGRAGAEKSAPGFVMTGYANPVRLTTSLIGVRGGDHPINWSHHI"
     gene            638..1195
                     /locus_tag="JNZ89_004454"
     CDS             638..1195
                     /locus_tag="JNZ89_004454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001530027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HAY8938084.1"
                     /translation="MNTAITFSNESPKVFFKDGRLVTTSQAVADYFDKQHKHVLAKID
                     TLDCSPEFTSANFSADVQTVEIGNGAERESRCYLITKDGFMFLVMGFTGKKAARLKEA
                     YIEKFNAMEEELHKRPPAAQNSPAPNNGCALLIHFDKHGQVEFTEKVPADAMVCTLER
                     FKFYLEQHGWIVARKEQLVERLMRF"
     gene            complement(1607..1876)
                     /locus_tag="JNZ89_004455"
     CDS             complement(1607..1876)
                     /locus_tag="JNZ89_004455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000937495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8938085.1"
                     /translation="MLPQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEYIAPLQD
                     AVDLEIATEEERSLLEAWNKYRVLLNRVDTSTAPDIEWPANPVRE"
     gene            1945..>2177
                     /locus_tag="JNZ89_004456"
     CDS             1945..>2177
                     /locus_tag="JNZ89_004456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000742376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HAY8938086.1"
                     /translation="MKKNTDDGAKIYTPLTLKLYDWWVLGVSNRLAWGCPTKEHLLPH
                     FLEHVGNNHLDIGVGTGFYLTHVPESSLISLMD"
BASE COUNT          588 a          514 c          456 g          619 t
ORIGIN      
        1 tttatgccat gtccttattg accccgtata ttacggggtc gtttttgtgc ggaattaaaa
       61 acgatatcct gctgagaaca taaacaccca cggatcgagg cgtacgctat catgttgctg
      121 tgcaccgccc agcttataat tggcggtggt atcgatatcc atgtaccaga ctgacatgtt
      181 ttaaaaaatg caataagaca ttgtatctga aagaaaaaac aggattttga ggcgcttttt
      241 tataccgttt ttccgtgttt ttaactgcct gattttattg aaatcttttt tagttttgca
      301 gaaaggattt tttgctcgat cgctttaatt ttatacattc ctgataacgg aaattttttt
      361 gcccgttgac agtttttgtt ctccggggct atattcctca cacaaccgca aaatcggttg
      421 tcgggattgg cgtctcggat aacatcacaa cgcatagccg cgtttgcggt tttttttgcg
      481 ttaagcattg ccacattcgc attatggtgg ggcgtgcagg ggcggagaaa tccgcgccgg
      541 gttttgtgat gaccggttac gccaaccctg tacgtctcac cacctccctg attggcgtca
      601 gaggtggtga tcatccaatt aattggagtc atcacatatg aatacagcta taactttttc
      661 taacgagtca ccaaaagtct ttttcaaaga tggtcgcctg gttaccacct ctcaagctgt
      721 tgccgactac ttcgataaac aacataaaca cgttttagct aagattgaca cactcgactg
      781 ctctcccgaa tttacatcag ccaacttttc ggccgatgtt cagactgtcg aaattggcaa
      841 cggcgcagaa cgtgaatcac gatgctacct gatcacaaaa gacggcttca tgttcctcgt
      901 aatgggattt actggcaaaa aagcagccag actaaaagaa gcttacattg aaaaatttaa
      961 cgcaatggaa gaagaactcc acaaacgtcc tcctgcagca caaaactccc ccgccccaaa
     1021 taatggatgc gcattactga tccacttcga taaacacggt caggtcgagt tcacagaaaa
     1081 agtccccgcc gatgcgatgg tatgcacgct ggaacggttt aaattttatc tggagcaaca
     1141 tgggtggatc gttgcccgta aagaacaatt ggtggaaagg ttgatgcggt tttaatgaat
     1201 gcaaaacccc ggatgatcac cggggttaat tttatcgagc gtgattgccg ctaatcgcca
     1261 tcgctctgat tgagcgtaaa tcattcaggt tattcagttc ttccttctgc tctcgctgac
     1321 gtcaataaat cccatcattg cgatcaacct catccttaac cattgatgcg agcagttctt
     1381 ccagtttctg cgctgacagc tttacctggt gatcttcagc attttcccgg gctattgtgg
     1441 ttcgcgcagt ggctgatttt gctgacatca ccacaggggg cagacggacc attgaaccat
     1501 ggcctccgga acaaataagg gcaaaaataa caaccactat cgaaagctca caaactaacc
     1561 gcagcacgtt cctgcatacg acgtgtctgc ggcataatcc caatgattac tccctgacag
     1621 gatttgcagg ccactcaata tcaggtgcag ttgatgtatc aacacgattc aacaataccc
     1681 gatatttatt ccatgcctcc agcaacgatc tttcttcctc cgttgcgatt tccagatcta
     1741 cagcatcctg cagtggcgca atatactcac tgaattcctg gatgtagaac tgtgtggtga
     1801 cggtcttcca gccattcggc tcctgctgta tcgaagcata ccaggctatt tcaatatcgc
     1861 tatgctgcgg cagcatttaa ccccttgtaa ttcatcgcca taattgattt aattcacaaa
     1921 taaaactata acacggtgaa atcaatgaaa aaaaacacag atgatggggc taaaatttac
     1981 acaccactta ccctaaagct ttatgactgg tgggttttgg gagtatcaaa tcggcttgca
     2041 tggggatgtc ctacaaagga acaccttctt ccacactttc tggaacatgt aggtaacaac
     2101 catctggata ttggtgttgg aactgggttt taccttactc acgtacctga gagtagtctg
     2161 atatctttaa tggattt
//
LOCUS       DADMIB010000317         2176 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.325, whole genome shotgun sequence.
ACCESSION   DADMIB010000317 DADMIB010000000
VERSION     DADMIB010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.325"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..709)
                     /gene="ipaH9.8"
                     /locus_tag="JNZ89_004457"
     CDS             complement(<1..709)
                     /gene="ipaH9.8"
                     /locus_tag="JNZ89_004457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH9.8"
                     /protein_id="HAY8938087.1"
                     /translation="MLPINNNFSLPQNSFYNTISGTYADYFSAWDKWEKQALPGEERD
                     EAVSRLKECLINNSDELRLDRLNLSSLPDNLPAQITLLNVSYNQLTNLPELPVTLKKL
                     YSASNKLSELPVLPPALESLQVQHNELENLPALPDSLLTMNISYNEIVSLPSLPQALK
                     NLRATRNFLTELPAFSEGNNPVVREYFFDRNQISHIPESILNLRNECSIHISDNPLSS
                     HALQALQRLTSSPDYHGP"
     gene            complement(971..1066)
                     /locus_tag="JNZ89_004458"
                     /pseudo
     CDS             complement(971..1066)
                     /locus_tag="JNZ89_004458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(1102..1407)
                     /gene="ccdB"
                     /locus_tag="JNZ89_004459"
     CDS             complement(1102..1407)
                     /gene="ccdB"
                     /locus_tag="JNZ89_004459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858358.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin CcdB"
                     /protein_id="HAY8938088.1"
                     /translation="MQFKVYAYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSD
                     KVSRELYPVVHVGDESWRMMTTDMASVPIFVIGEEVADLSHRENDIKNAINLMFWGI"
     gene            complement(1409..1627)
                     /gene="ccdA"
                     /locus_tag="JNZ89_004460"
     CDS             complement(1409..1627)
                     /gene="ccdA"
                     /locus_tag="JNZ89_004460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin CcdA"
                     /protein_id="HAY8938089.1"
                     /translation="MKQRITVTIDSDSYQLLKSANVNISGLVNTAMQKEARRLRAERW
                     QAENQQGMAEIARFIEMNGSFADENRDW"
BASE COUNT          574 a          458 c          513 g          631 t
ORIGIN      
        1 gtgggccgtg gtagtccggc gaagaggtta atctttgcag ggcttgcaga gcatgggatg
       61 ataatgggtt atcactaata tgtattgaac attcattcct cagattaaga atgctttccg
      121 ggatatgact tatctgattt ctatcaaaaa aatactctct gacaacggga ttatttccct
      181 cagaaaatgc tggtagctca gtgaggaaat tacgggtcgc tctgagattt ttaagagcct
      241 gtgggagcga tggtaaggag actatttcgt tatagctgat attcatagtc aataacgaat
      301 cgggtaaagc tggcaggttt tccagctcat tgtgttgtac ctgaagtgac tccagcgcag
      361 gaggtagcac gggcaattct gataatttat tgctggcgga atataatttt tttagcgtaa
      421 caggcagttc aggtaggtta gttaattgat tatatgatac attgagcagc gttatctgag
      481 ctggtaagtt gtcaggtagc gaggacagat ttaaacggtc cagtcgaagt tcatcggaat
      541 tattgataag acattcttta agtcgggaga cagcctcatc acgctcttca ccggggagcg
      601 cttgtttttc ccatttatcc catgctgaaa agtaatcagc atatgtaccg gaaatagtgt
      661 tataaaaaga attttggggc aatgaaaagt tattatttat cggtaacatg atgggcatcc
      721 agttaaagcc ggtggacaaa tggctttgtt aaaagaaata agcaggagtt tttatgaagt
      781 tcattccatg aaatgaactt cagcactttt ttattataat aaggataaac aaaattggct
      841 gtaaaaaaac gatactgttt cagttaaccg tgaatggcct gtttgcaccg tattgttctt
      901 gtttttcggt tagttaaaca tcgtacttca tatttgaacg gtaagcggct cgtcagaacc
      961 gtattgatat ttactgagag gtcagatcaa ctttccaggg caacagatcg cgtacccagt
     1021 ttgccggcca gtcttggata tgctcaatga cgtaacgcag ccattttgtc aacgccacga
     1081 tttttgaccc tagcctgaca tttatattcc ccagaacatc aggttaatgg cgtttttgat
     1141 gtcattttcg cggtggctga gatcagccac ttcttccccg ataacgaaga tcggcacact
     1201 ggccatatca gtggtcatca tgcgccagct ttcatccccg acatgcacca ccgggtaaag
     1261 ctcacgggag actttatctg acagcaggcg ggcactggcc agggggatca ccatccgtcg
     1321 tccgggcgtg tcaataatgt cactctgtac atccacaaac agacgataac gactctctct
     1381 tttataggcg taaaccttaa actgcatttc accagtccct gttctcatcg gcaaaagagc
     1441 cgttcatttc aataaaacgg gcgatctcag ccatcccctg ctgattttca gcctgccagc
     1501 gttccgcacg cagacggcgg gcctcttttt gcatggccgt atttaccagg cctgagatat
     1561 tcacgtttgc ggatttaagt aactgatagc tgtcactgtc tatagtgaca gtaatacgct
     1621 gcttcatgat aagccctcaa aaacatactt atgatatgta tatgagtata tattaatggt
     1681 acaaaccatc aatatccata aaaagtacac cattaattca ctataagttt ttaatacaat
     1741 tttttctgct gcgatttttt tatacgataa ttagcatact tataacaccg taagtaaatt
     1801 acatgaaagc aggcacagcg tgatccgatt tttctgcgta taacgatttt ccggaagtgt
     1861 aatacggttg cgccccgggc cgggcaccct tttctgttgt tgtgtacggg cccacagaga
     1921 atggtaccgg aggcgggctc agaagtactg agtcgggtga tcgcgtcagg ccgcgaagta
     1981 ctgacacggg tattggtgac tggtgatgaa gtactgcccc gggtatgatt tcaggctgat
     2041 tcaggttctg attctctgtc agtccgcgtg gttgctggcc tggctgattt cctgttgtca
     2101 ggcgttcaac aaccgactgc aggttatagc ccggttcacg aaccacggca gcctggcggc
     2161 tgcaaatcgg ggtgtg
//
LOCUS       DADMIB010000318         2175 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.326, whole genome shotgun sequence.
ACCESSION   DADMIB010000318 DADMIB010000000
VERSION     DADMIB010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.326"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            334..557
                     /locus_tag="JNZ89_004461"
                     /pseudo
     CDS             334..557
                     /locus_tag="JNZ89_004461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            666..934
                     /locus_tag="JNZ89_004462"
                     /pseudo
     CDS             666..934
                     /locus_tag="JNZ89_004462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001449236.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1327..>2175
                     /locus_tag="JNZ89_004463"
     CDS             1327..>2175
                     /locus_tag="JNZ89_004463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858398.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY8938090.1"
                     /translation="MIKSTNIQAIGSGIMHQINNIYSLTPFPLPMELTPSCNEFYLKA
                     WSEWEKNGTPGEQRNIAFNRLKICLQNQEAELNLSELDLKTLPDLPPQITTLEIRKNL
                     LTHLPDLPPMLKVIHAQFNQLESLPALPETLEELNAGDNKIKELPFLPENLTHLRVHN
                     NRLHILPLLPPELKLLVVSGNRLDSIPPFPDKLEGLAMANNFIEQLPELPFSMNRAVL
                     MNNNLTTLPESVLRLAQNAFVNVAGNPLSGHTMRTLQQITTGPDYSGPRIFFSMGNSA
                     TISAPEH"
BASE COUNT          727 a          464 c          365 g          619 t
ORIGIN      
        1 gcttcttacc atatttgaaa taaagctcaa tagcgcaaat tttttgttct tcagtaaaca
       61 tgtttcatct tctgagagtc caggaaatcg tccgcatccc cattaccgtc ttatatcact
      121 ggcgctgaca tgtgctcatt gatgaagtga atctgaatga catgttttgc catatcaacg
      181 ccaaccggtg tatatttcat ttgtggagtc tccagtctga ggacgcttta tgcatcccgt
      241 attgggcagt atgatgccgg aaagctgcga ggctccacac ctgccagttt caccctttta
      301 accatcatac tactccgtgt ttaattgtgt gggatgcgtt cattacattt taacagtgtc
      361 accccgtcgg ccacgaaaga taaacaggtg accagaaaag ggatcttcat ccagcacatg
      421 ctatatcttg aacgtaacaa cctgaccctc cgcacccgca tcaagcggct ggcacgtaaa
      481 acaatctgct tctcgcgttc cgtggaaatc cacgaaaagt catcggctcc ttcattgaaa
      541 aacacatatt ctactgattg gaagcgccac ccgaaaaagt atcgtttttt tacagtaaac
      601 ttcatttagc cgactataat gtaaaaaaat aaatttttta ccgaaatata acataaggaa
      661 gtaatatgct tacacaaact atattccctt gtcttcccaa aaaacaagaa aatatcatcc
      721 ctgaagtatc aaatactata ttagtatctt ctactgttac tacagatgga tgtactgttt
      781 ttaataaaca aaaacagcca tatacgaatt gcaaatacct gctaccaacc gaacgaaaaa
      841 gttgaaattc acagctacag aaatacaatg gttgacaaag ataaatgaag ccggaattga
      901 tgaaaaacaa agccaacggt attctgattt ctgaagttaa tttcagactc gtttaagctc
      961 cattttcaaa aaaaaatata tcagggtttg ttactaataa cttctgaaaa cagaaaaaaa
     1021 atagagcagt aattctattt cagagaggag taactccatc tatcctcgat acgtactgaa
     1081 cgttatcgtg atatattcat catgctttct tcaccattat tcgagtacag ggagagacgc
     1141 aatgacctta aatacctttt tatggctgaa ttaccattct caggaataac agcagactcc
     1201 ttcccataga cggcttaggg ggaaagcaat acccggagaa agggtacaaa gcaaactgtt
     1261 ttaaaattaa taagctatat tctatttcac tagaattctt atcgctgata agaaatttta
     1321 gttataatga ttaaatcaac caatatacag gcaatcggtt ctggtattat gcatcaaata
     1381 aacaatatat actcgttaac tccatttcct ttacctatgg aactgactcc atcttgtaat
     1441 gaattttatt taaaagcctg gagtgaatgg gaaaagaacg gtaccccagg cgagcaacgc
     1501 aatatcgcct tcaataggct gaaaatatgt ttacaaaatc aagaggcaga attaaattta
     1561 tctgagttag atttaaaaac attaccagat ttaccgcctc agataacaac actggaaata
     1621 agaaaaaacc tattaacaca tctccctgat ttaccaccaa tgcttaaggt aatacatgct
     1681 caatttaatc aactggaaag cttacctgcc ttacccgaga cgttagaaga gcttaatgcg
     1741 ggtgataaca agataaaaga attaccattt cttcctgaaa atctaactca tttacgggtt
     1801 cataataacc gattgcatat tctgccacta ttgccaccgg aactaaaatt actggtagtt
     1861 tctggaaaca gattagacag cattcccccc tttccagata agcttgaagg gctggctatg
     1921 gctaataatt ttatagaaca actaccggaa ttacctttta gtatgaacag ggctgtgcta
     1981 atgaataata atctgacaac acttccggaa agtgtcctga gattagctca gaatgccttc
     2041 gtaaatgttg caggtaatcc actgtctggc cataccatgc gtacactaca acaaataacc
     2101 accggaccag attattctgg tcctcgaata tttttctcta tgggaaattc tgccacaatt
     2161 tccgctccag aacac
//
LOCUS       DADMIB010000319         2095 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.327, whole genome shotgun sequence.
ACCESSION   DADMIB010000319 DADMIB010000000
VERSION     DADMIB010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2095)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2095)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2095
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.327"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            113..463
                     /gene="tnpB"
                     /locus_tag="JNZ89_004464"
     CDS             113..463
                     /gene="tnpB"
                     /locus_tag="JNZ89_004464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8938091.1"
                     /translation="MISLPSGTRIWLVAGITDMRKSFNGLGEQVQHVLNDNPFSGHLF
                     IFRGRRGDMIKILWADADGLCLFTRRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDW
                     RQPKTSRLNALTML"
     gene            494..2086
                     /locus_tag="JNZ89_004465"
     CDS             494..2086
                     /locus_tag="JNZ89_004465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY8938092.1"
                     /translation="MNQKYLIRIAELECQLRQKDQQLSLVEETEAFLRSALARAEEKI
                     EEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQ
                     VPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDYLGEVSAEQLELVSSALK
                     VIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIF
                     ARQGVELSRALLSNWVDACCQLMTPLNDALYRYVMNSRKVHTDDTPVKVLAPGRKKAK
                     TGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLSPFRGILQADAFNGYDRLF
                     SAEREGGALTEAGCWAHARRKVHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSE
                     RLAVRQMQSKPLLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFSDDGLAEA
                     DNNAAERALRAVCLGKKNFMFFGSDHGGERGALLYGLIGTCRLNGIDPEAYLRYILSV
                     LPEWPSNRVDELLPWNVALTNK"
BASE COUNT          527 a          529 c          602 g          437 t
ORIGIN      
        1 cagttagtgc cagctcctgc aaggtggagt tccgtcacgg taacatgacg ctggaaaatc
       61 cttcaccaga gctgctcaca gtgttgatcc gtgaactgac cgggagggga cgatgatctc
      121 actcccgtca ggcacccgca tctggctcgt tgctgggata accgatatgc gtaagtcttt
      181 caacgggctg ggtgaacagg tacagcatgt gctgaatgat aatcccttct ccggtcacct
      241 gttcatcttc cgtggccgac ggggtgacat gattaaaatc ctgtgggctg atgctgatgg
      301 tctgtgcctg ttcaccagac gcctggagga aggccagttt atctggcctg ctgtgcgtga
      361 cggcaaggta tccattaccc gctcgcaact ggcaatgctc ctcgataagc tggactggcg
      421 tcagccaaaa acatcccgcc ttaatgcact gacaatgttg taaaaatgtc atggccggat
      481 tataaaaacg gccatgaatc aaaaatacct cattcgcatt gcagaactgg aatgccagct
      541 ccgtcagaaa gaccagcaac tgagtctggt tgaagagacg gaggccttcc tgcgctctgc
      601 actggcccgc gccgaagaaa agatcgaaga agatgaacgg gaaatagaac atctgcgggc
      661 tcagatagaa aaactgcgcc ggatgctgtt cggtacccgt tctgaaaaac tgcgtcgtga
      721 agttgaacag gctgaggccc tgctgaaaca acgcgaacag gacagtgatc gttacagtgg
      781 gcgggaagac gatccgcagg ttccccgcca gttgcgacag tctcgtcatc gtcgcccgtt
      841 accggagcat ctgccccgcg aaataaatcg cctggagcca gaagaaagct gttgcccgga
      901 gtgtggcggt gagctggatt atctggggga agtcagcgca gaacaactgg aactggtgag
      961 cagcgctctg aaagtgatcc gcacagaacg ggtaaaaaaa gcctgtacaa aatgtgactg
     1021 catcgttgaa gcaccggcac catcccgtcc gatagagcgt ggtatcgcgg gcccggggtt
     1081 acttgcccgc gtgttaacgg gaaaatactg cgaacacctg ccactgtatc gtcagagtga
     1141 aatttttgcc cgtcagggtg tcgaactgag ccgtgcatta ctctccaact gggttgacgc
     1201 gtgctgccag ttaatgacgc cgctgaatga tgctctgtac cgttatgtaa tgaacagccg
     1261 caaagttcac actgatgaca caccagtaaa agtgctggca ccgggcagga agaaggcgaa
     1321 aacaggatat atctggacgt atgtccggga tgacaggaat gccggttcgc cagagcctcc
     1381 ggcggtctgg ttcgcctact caccggacca tcagggtaaa catccggagc agcaccttag
     1441 tcccttccgg ggtatcctgc aggcagatgc gtttaatggt tacgatcggc tgttcagtgc
     1501 cgaacgagaa ggcggcgcgt tgacggaagc aggatgctgg gctcatgcgc ggcgcaaagt
     1561 ccacgatgta tatatcagta ccaaaagcgc gacagcggaa gaagccctga aactaatcgg
     1621 tgagctgtac gccatcgagc acgaaatacg cgggttgccg gtgtctgaac gcctggcggt
     1681 caggcaaatg cagagtaaac cgctactgac ttccctgtat aagctgatgc aggagaaaga
     1741 acacacgtta tcgaaaaaat gccgtctgag agatgcgttc cggtatatca ggaagcactg
     1801 ggttgcgttg tgcaacttca gtgatgatgg tctggctgag gcggataata atgccgcgga
     1861 aagagcgctt cgtgcagtct gtctcggaaa gaaaaacttt atgttcttcg gcagcgatca
     1921 cggtggagag cgtggtgcgc tactgtacgg gctgatcggc acctgccgac tgaacggtat
     1981 cgatccggaa gcgtatctgc gctatatcct gagcgtactg ccggaatggc cttccaaccg
     2041 tgttgacgaa ctcctgccat ggaacgtagc actcaccaat aaataagcgt caata
//
LOCUS       DADMIB010000320         2033 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.328, whole genome shotgun sequence.
ACCESSION   DADMIB010000320 DADMIB010000000
VERSION     DADMIB010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.328"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..483)
                     /locus_tag="JNZ89_004466"
     CDS             complement(1..483)
                     /locus_tag="JNZ89_004466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8938093.1"
                     /translation="MEINVTAPALLTDEHILQPFDCGNEVLSNWLRGRAMKNQMLNAS
                     RTFVICLEDTLRVVGYYSLATGSVTHAELGRSLRHNMPNPVPVVLLGRLAVDVCIQGH
                     GFGKWLLSDAIHRVVNLADQVGIKAVMVHAIDDDARAFYERFGFVQSVVAPNTLFYKV
                     "
     gene            complement(474..776)
                     /locus_tag="JNZ89_004467"
     CDS             complement(474..776)
                     /locus_tag="JNZ89_004467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HAY8938094.1"
                     /translation="MEVFMSTAASVRKTPREHQINIRATDEERAVIDYAASLVNKNRT
                     DFIMELAYQEAKNIILDQRLFVLDNERYDSFITQLEAPVQNAEGRERLMAVKPEWK"
     gene            1048..1320
                     /locus_tag="JNZ89_004468"
     CDS             1048..1320
                     /locus_tag="JNZ89_004468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_145811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938095.1"
                     /translation="MSHNLEHQKVHTRMVKEVLKAVARANNHPYKSVFADFITGHPSC
                     TVCFWETFHKMYPDSPYEYVTFCHTCRRFDLYETEAEMKADDPKWW"
     gene            1301..>2033
                     /locus_tag="JNZ89_004469"
     CDS             1301..>2033
                     /locus_tag="JNZ89_004469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004150716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISSbo1 family transposase"
                     /protein_id="HAY8938096.1"
                     /translation="MTRSGGDFQPRPLKRLFTANQCWTSFLDAGGLRDIRVEAVTKML
                     ACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGKKATDLWIATQLNRLPDCDW
                     VHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQEPGIFCAIHTYGRRLN
                     WHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLLKAWSEGLAMPESLSH
                     ITTESQWRSLVLKAGGKYWHVYMSKK"
BASE COUNT          553 a          516 c          499 g          465 t
ORIGIN      
        1 tcagacctta taaaacaagg tattaggtgc cacaactgac tgaacaaaac caaaacgctc
       61 ataaaatgct ctggcgtcat catcaattgc atgtaccata acagccttaa tgccaacctg
      121 atcagccaga ttgacaaccc ggtgaatggc atcacttagt agccatttac cgaaaccatg
      181 cccctggata caaacatcaa cagccagacg ccctaacaga acaacaggga caggattggg
      241 catgttatgc cgcaaactgc gaccaagctc ggcatgagtg acggaaccag tagctaatga
      301 gtagtatccc acaacacgta aagtatcctc caagcaaata acgaacgtgc gagaagcatt
      361 gagcatctgg tttttcatag cccgaccacg taaccagtta cttagcacct catttccaca
      421 gtcaaatggc tgaagtatat gctcatccgt caacaatgct ggcgcggtga catttatttc
      481 cattcaggct ttaccgccat cagacgttca cgcccttctg cattctgcac aggagcttcc
      541 agttgcgtaa taaacgaatc ataacgttcg ttatccagca caaataaacg ttgatccagg
      601 ataatgtttt tagcttcctg gtacgccagt tccatgatga aatcggtacg gttcttattg
      661 accaagctcg cagcataatc aataacggct cgttcctcat cagttgcccg gatgttaatc
      721 tgatgttctc gcggtgtttt acggacgctt gcagctgtag acataaaaac ctccattggt
      781 aacaatttgc tatgcaatta atgttatcgc aaatggtaac agaacgctat acagaatcac
      841 ttacgggaaa agcgatcccc tgataaaaac aatggcagag acctgaacat tgtgacgatg
      901 atctgtgtcg gcgcacaaat catgtctgat tacggccgtt taatgtgatt ttgataatga
      961 aatgcctgaa ccacggcagc ctggcggctg caaatcgggg tgtggcagaa tatgagcttt
     1021 cagagtaacc atccagaatg agttcccatg tcacacaacc tggagcacca gaaagtccac
     1081 accagaatgg tgaaagaggt tctgaaagcc gtcgccagag ccaataatca cccttataag
     1141 tccgtatttg cagactttat caccggtcat ccctcctgca cggtctgttt ctgggaaacc
     1201 ttccacaaaa tgtacccgga ttcaccgtac gaatacgtca cgttctgcca tacctgccgt
     1261 cgttttgatt tatacgaaac agaagcggag atgaaggcgg atgacccgaa gtggtggtga
     1321 ttttcagccc cgaccgctga aacgcctgtt cacagccaac cagtgctgga cgtccttcct
     1381 ggatgcgggc ggtctgcgcg atatcagggt tgaggctgtc acaaaaatgc tggcctgcgg
     1441 cacgcggata ctgggagtga aggaatacat ctgcgataaa cctgagtgcc cccacgtcag
     1501 atacgtcact aactcatgcg gcagccgtgc ctgcccgtcc tgcggaaaaa aggccacaga
     1561 cctgtggata gcgacacagc tgaatcgtct tcctgactgc gactgggtac acctggtctt
     1621 caccctgccg gacacgctgt ggccggtgtt cgaaagcaac cggtggctgc tgaatgacgt
     1681 gtgccgtctg gcggtggaga atctgctgta tgccgcccgg aaacgggggc aggaacccgg
     1741 tatcttctgc gccatccaca cgtatggccg tcgtctcaac tggcatccgc atgtacatgt
     1801 gtctgtaacc tgtggaggtc tgaataagca tggtcagtgg aaaaagctga gcttcctgaa
     1861 agacgcgatg cgttcacggt ggatgtggaa tatgcggcag ctgcttctga aagcgtggtc
     1921 agaggggctg gcgatgccgg agtcgttgtc acatatcacg acggaatcac agtggagaag
     1981 cctggtgctg aaagccggag gaaaatactg gcatgtgtac atgtcgaaaa aaa
//
LOCUS       DADMIB010000321         1987 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.329, whole genome shotgun sequence.
ACCESSION   DADMIB010000321 DADMIB010000000
VERSION     DADMIB010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.329"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            14..172
                     /locus_tag="JNZ89_004470"
     CDS             14..172
                     /locus_tag="JNZ89_004470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938097.1"
                     /translation="MYLSRISEAISLSAGEVAHRLIVPSSDIDLGETELPVLGEITWQ
                     AYDPARSK"
     gene            172..762
                     /locus_tag="JNZ89_004471"
     CDS             172..762
                     /locus_tag="JNZ89_004471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HAY8938098.1"
                     /translation="MDSLQDDYTKLLYGLMQPGPAWSDTDGVLDGLAPSLVRVHQRAD
                     ELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTLRQRQQRLEAKANVAGGINEQFF
                     LDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTP
                     IRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD"
     gene            749..1482
                     /locus_tag="JNZ89_004472"
                     /pseudo
     CDS             749..1482
                     /locus_tag="JNZ89_004472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000554725.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            1483..1956
                     /locus_tag="JNZ89_004473"
     CDS             1483..1956
                     /locus_tag="JNZ89_004473"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8938099.1"
                     /translation="MAIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAEL
                     GDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDARYKHRTEGVQDVRYGYEMYYNP
                     GSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI"
BASE COUNT          514 a          423 c          562 g          488 t
ORIGIN      
        1 gccagagggg cgtatgtatc tgtccagaat cagtgaggcc atcagtttgt ctgctggtga
       61 agtggcccac cggttaatcg tcccttcatc ggatattgac ctgggggaga ccgagcttcc
      121 ggtgctcggc gagatcacct ggcaggctta tgacccggca aggagtaaat aatggattcg
      181 ttacaggatg attatacaaa gctgctgtac ggactgatgc agccggggcc tgcatggtca
      241 gataccgacg gtgtacttga cggtctggca ccatcgcttg tgcgtgttca ccagcgggct
      301 gatgaactgg tgattgaaat cgatcccggt cagtccacag agctgattga acgttatgaa
      361 gaattgtatg gtttacctga ttcctgttcc cctgtcggaa cccagacatt acgccagcgt
      421 cagcaacgtc ttgaagcaaa agccaatgtg gctggtggca taaatgagca gttcttcctg
      481 gatcagcttg aggcgctggg atataccggc gtaacgatcg aacagttcca gcacctggat
      541 gcaagccccg atccggaatg gggagatcgc tggcgttatt tctggcgtgt gacgttgccg
      601 gtggatgccg gtgctcagtg gcagacatgc acggacgcct gcaacacacc gatccggacg
      661 tggggggata cggttgcgga gtgcgtgatt aataaattat gtccgtcaca caccgtcgtt
      721 ttattttcct atccagatga ggatgaagat gcacaggatt gatacgctga ctgcggtaaa
      781 agataagttt ggtccgggta agaacggatt tactgacgga aatcttcgca caggacgttt
      841 tgctacctgg ctgaacagtg ccatgtggaa tgccattcag gaggaaatct gtggtgtcat
      901 tgagaaggcc gggatagaac tgaataaaga agaacacgac cagctatata aggctatatt
      961 attgctggtg ggcggtgcaa ttaacgaaga ggcattgctg ataaaaaata acctttcgga
     1021 tgtggaagac agggatgagg ctgttgaaaa cctcggatta aaacccacgg tggataaggc
     1081 aaaaaatgcc gttcagcgtg atggcgacac catgaccgga gagctgaaaa tccgtggtgt
     1141 taatgcgctg aggattttca acgaagcttt tggcctgatt tttcgtcgtt cggaagagtg
     1201 cctgcacctt attcccacca gtgaaggtca gggggaaaat ggcgatattg gtcccctgcg
     1261 cccgttcacc attaatctgc ggacgggtga aatatccatg tcgcataaag tgtctgttgg
     1321 cggtggttcg caggtcaatg gtgcgctggg tatcggcgtt cagaacgccc tggggggaat
     1381 tcaattgctt tcggggataa cgatacaggt ataaaacaaa acggcgacgg cattctggat
     1441 gtttatgcga atggacagca tgtatttcgt ttccagaatg gtgtggcgat agcgttaaaa
     1501 aatattcagg ccggaaatgc taaaaaattc acgttatcca gcgccaacaa ctccacgaaa
     1561 aatgcagcgt tttatttgtg gggtaatcca tccaggcctg ttgttgcaga gcttggtgat
     1621 gattccggct ggcatttcta cagccagaga aataccgatg gtagtatcac attcgctgta
     1681 aacggacagg taattccgtt aaattacgga aacttcgatg cccgctataa acatcgaact
     1741 gagggggtac aggatgtgcg gtatggttat gaaatgtatt acaaccctgg cagcaacacc
     1801 gtttcatgga cgtttcgctc accttcggga cacgggttgt cagggatatc gatatcggat
     1861 accggccgta actcagcgga taacgtcaac ggtgtgtatt accgaccgct gcaaaaactg
     1921 attaatggca tctggtataa cgtagcgagt atttaacaat gttgcattta aaaaatatta
     1981 cggcagg
//
LOCUS       DADMIB010000322         1938 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.330, whole genome shotgun sequence.
ACCESSION   DADMIB010000322 DADMIB010000000
VERSION     DADMIB010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1938)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1938)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1938
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.330"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..1213)
                     /locus_tag="JNZ89_004474"
     CDS             complement(<1..1213)
                     /locus_tag="JNZ89_004474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3-like element TnAs1 family transposase"
                     /protein_id="HAY8938100.1"
                     /translation="MPRRLILSATERDTLLALPESQDDLIRYYTFNDSDLSLIRQRRG
                     DANRLGFAVQLCLLRYPGYALGTDSELPEPVILWVAKQVQAEPASWAKYGERDVTRRE
                     HAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALS
                     VIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLRQAPLKP
                     NSRHMLEHIERLKTFQLVDLPEGLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYA
                     TLAAVVLESTATVIDELVDLHDRILVKLFSGAKHKHQQQFQKQGKAINDKVRLYSRIG
                     QALLEAKESGSDPYAAIEAVIPWDEFTESVSEAELLARPEGFDHLHLVGENFATLRRY
                     TPALLEVLELRA"
     gene            complement(1217..1777)
                     /locus_tag="JNZ89_004475"
     CDS             complement(1217..1777)
                     /locus_tag="JNZ89_004475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY8938101.1"
                     /translation="MQGHRIGYVRVSSFDQNPERQLEQTQVSKVFTDKASGKDTQRPQ
                     LEALLSFVREGDTVVVHSMDRLARNLDDLRRLVQKLTQRGVRIEFLKEGLVFTGEDSP
                     MANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQRATA
                     GEPKAQLAREFNISRETLYQYLRTDD"
     gene            1766..1933
                     /locus_tag="JNZ89_004476"
     CDS             1766..1933
                     /locus_tag="JNZ89_004476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938102.1"
                     /translation="MPLHDVSLVEGGLSALSVPLCLKAHFCQAEIYNLRGHVSKNGKA
                     DSILTKRRGPA"
BASE COUNT          300 a          620 c          636 g          382 t
ORIGIN      
        1 cggcgcgcag ttccagcacc tccagcaagg ccggcgtgta acggcgcagg gtggcgaagt
       61 tctcgccgac caggtgcagg tggtcgaagc cttccggccg ggccagcagc tcggcctcgc
      121 tgacgctctc ggtgaactcg tcccagggaa tcaccgcctc gatggcggca taggggtcgc
      181 tgccgctttc cttcgcttcc agcagcgcct ggccgatcct ggagtacagg cgcaccttgt
      241 cgttgatcgc cttgccctgc ttctggaact gctgctgatg cttgtgcttc gcgccgctga
      301 acagcttgac caggatgcgg tcatgcagat cgaccagctc atcgatcacg gtcgcggtgc
      361 tctccagcac cacggcggcc agggtcgcgt agcggcgctg cggctcgaac ttaccgaggt
      421 ctttgggcgt catctgccca ccctcgcggg ccagcttgag caggcggttc tggtggatgt
      481 gccggcccag gccttcgggc aagtccacca actgaaatgt cttcagccgc tcgatgtgtt
      541 ccagcatgtg ccgagagttg ggtttcagcg gtgcctggcg cagccaggtc aaccaggtga
      601 tgctgctgcc ggccttgagc ttcaacagct cgtccagctt ggcccgatgc gagtccgtga
      661 gtggttcgac cagggcgcgg tagacccgcc gattggctcg cgcaatggct tccgagcagg
      721 cccggtcaat cacgctcagc gccggcagga tgcgtcgttt ctgccgtagg ctctccaggg
      781 cctgaccggc cagcagcaag cctttgtcgg tctgctgggc cagctcggtt agctcgcgca
      841 ccagggcgcg gaagtcggac aggccgaacg gggccagttg caggtaggtg cgcagttcct
      901 gggcatgctc gcgacgggtc acgtcgcgct cgccgtactt tgcccagctc gccggctcgg
      961 cctggacttg cttcgccacc cacaggatga ccggctcggg cagctcgctg tcggttccca
     1021 gcgcgtaacc ggggtagcgc agcaggcaga gctgcacggc gaagccgagg cggttggcgt
     1081 cgccgcgtcg ctggcggatc agcgacaggt cggagtcgtt gaaggtgtag tagcggatca
     1141 ggtcatcctg gctttccggc agcgcaagca gggtgtcccg ctccgtggcc gagaggatca
     1201 agcgacgcgg catgtgtcag tcgtccgtgc ggaggtactg gtagagggtt tcccggctga
     1261 tgttgaactc gcgggcaagc tgcgccttgg gctcgccggc cgtcgctcgc tgccgcaggg
     1321 tagcagcctg ctcatcggac agggctttct tgcggccccg gtacgcgcca cgctgcttgg
     1381 ccaaggcgat gccctcacgc tgccgctcgc ggatcagggc gcgctcgaac tcagcgaagg
     1441 cccccatcac cgacagcatc aggttggcca tcggcgagtc ctcgccagtg aacaccaggc
     1501 cctccttcag gaactcgatg cgcacgccgc gctgagtcag cttctgtacc aagcgacgca
     1561 ggtcatcgag gttgcgggcc agccgatcca tgctgtgcac caccactgta tcgccttcgc
     1621 ggacgaagct cagcagcgct tcgagctggg ggcgctgggt gtccttgccc gatgccttgt
     1681 cggtgaacac cttgctcacc tgggtttgtt ccagctggcg ttccgggttc tggtcaaagc
     1741 tgctgacccg gacgtagccg atgcggtgcc cctgcacgat gtctccttgg ttgaaggcgg
     1801 cttaagtgca ctttctgttc cgttgtgcct caaagcccat ttctgtcagg ctgaaatcta
     1861 taaccttcgc gggcatgtgt caaaaaatgg gaaagcagac tctattctga cgaagcggcg
     1921 cggccctgcc tgacatca
//
LOCUS       DADMIB010000323         1890 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.331, whole genome shotgun sequence.
ACCESSION   DADMIB010000323 DADMIB010000000
VERSION     DADMIB010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.331"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..297
                     /gene="tnpB"
                     /locus_tag="JNZ89_004477"
     CDS             <1..297
                     /gene="tnpB"
                     /locus_tag="JNZ89_004477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019104956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8938103.1"
                     /translation="DMRNGFNGLAAKVQTTLKDDPMSGHVFIFRGRNGSQVKLLWSTG
                     DGLCLLTKRLERGRFAWPSARDGKVFLTPAQLAMLLEGIDWRQPKRLLTSLTML"
     gene            346..1884
                     /locus_tag="JNZ89_004478"
     CDS             346..1884
                     /locus_tag="JNZ89_004478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000099160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc22 family transposase"
                     /protein_id="HAY8938104.1"
                     /translation="MSSSLPDDINALKRLLAEQEALNRALLEKLNEREREIDHLQAQL
                     DKLRRMNFGSRSEKVSRRIAQMEADLKALQKESDTLTGRVDDPAVQRPLRQTRTRKPF
                     PESLPRDEKRLLPAASCCPECGGSLSYLGEDAAEQLELMRSVFRVIRTVREKHACTQC
                     DAIVQAPAPSRPIERGIAGPGLLARVLISKYAEHTPLYRQSEMYGRQGVELSRSLLSG
                     WVDACCRLLSPLEEALQDYVLTDGKLHADDTPVPVLLPGNKKTKTGRLWTYVRDDRNA
                     GSTLAPAVWFAYSPDRKGIHPQTHLAGFSGVLQADAYAGFNELYRDGRITEAACWAHA
                     RRKIHDVHVRTPSALTEEALKRIGELYAIEAEIRGMTAEQRLAERQLKTKPLLKSLES
                     WLREKMKTLSRHSELAKAFAYALNQWPALTYYADDGWAEADNNIAENALRMVSLGRKN
                     YLFFGSDHGGERGALLYSLIGTCKLNGVEPESYLRYVLDVIADWPINRVGELLPWRVA
                     LPTE"
BASE COUNT          421 a          537 c          577 g          355 t
ORIGIN      
        1 gatatgagaa atggcttcaa cggcctggcg gcaaaggtgc agacgacgct gaaagacgat
       61 ccgatgtcag gtcacgtttt tatcttccgt gggcgtaatg gcagtcaggt aaagctcctc
      121 tggtctaccg gcgatggact gtgtctgctg accaaacggc tggagcgcgg ccgcttcgcc
      181 tggccgtcag cccgggatgg caaagtgttc ctcacaccgg cacagctggc gatgctcctt
      241 gaaggtatcg actggcggca gcctaaaaga ctgcttacgt ccctgactat gttgtaagcc
      301 tctttatcct ggtcgacgct gaatgagcct ggtaatatac ccggtatgag cagctcactt
      361 cctgacgata tcaatgcact gaaacgtctc cttgccgaac aggaggcgct gaaccgtgcc
      421 ctgctggaaa agctgaacga gcgtgaacgc gaaatagacc atctgcaggc acagctggat
      481 aagctgcgcc ggatgaactt cggcagccgc tccgaaaaag tctcccgtcg tatcgcacag
      541 atggaagctg acctgaaggc acttcagaaa gaaagtgata cccttaccgg tcgggttgac
      601 gacccggccg tgcagcgccc gctgcgtcaa acccgcaccc gcaaaccgtt ccccgaatca
      661 ctcccccgcg atgaaaaacg gctgctgccg gcagcgtcat gctgcccgga atgtggaggc
      721 tcactgagct atctgggtga ggatgccgcc gaacagctgg agttgatgcg cagcgtcttc
      781 cgggttatcc ggactgtacg tgaaaagcat gcctgtactc agtgcgatgc catcgtgcag
      841 gcccccgcgc cttcacggcc catcgagcgg ggtatcgcag gaccggggct gctggcccgc
      901 gtgctgatct caaagtatgc agagcacacc ccgctgtacc gccagtctga aatgtacggc
      961 cgccagggcg tggagctgag tcgttcactg ctgtcgggct gggtggatgc atgctgccgg
     1021 ctactgtcac cgctggaaga agcgcttcag gactatgtgc tgactgacgg taagctccat
     1081 gctgatgaca cgcctgtccc ggtgctgttg ccaggcaata agaaaacgaa gaccgggcgg
     1141 ttatggacct acgttcgtga cgaccgtaac gccgggtcaa cgctggcgcc ggcggtgtgg
     1201 ttcgcttaca gcccggacag aaaaggcatc catccgcaga cccatcttgc ggggttcagt
     1261 ggtgtactgc aggcggatgc atacgccggg ttcaacgagc tgtaccggga tggccggata
     1321 acggaagccg cctgttgggc tcacgcccgc cgtaaaatcc acgatgtgca cgttcgcacc
     1381 ccgtcagccc tgacggagga agcgctgaaa cggatcggcg aactgtacgc catcgaggca
     1441 gagataaggg gaatgacggc ggagcagcgc cttgccgaac gtcagttgaa aacgaaaccg
     1501 ctgctgaaat ccctggaaag ctggctgcgt gaaaagatga aaaccctgtc gcgacactca
     1561 gaactggcga aagcgttcgc atacgccctg aaccagtggc cggcgctgac gtactatgca
     1621 gatgatggct gggctgaggc ggacaataac atcgctgaaa atgcgttgcg gatggtcagt
     1681 ctgggccgca aaaactacct gttcttcggt tcggatcatg gaggagagcg gggagcgctg
     1741 ctgtacagcc tgatcgggac gtgcaaactg aacggagtgg agccagaaag ctacctccgc
     1801 tatgtccttg acgtcatagc cgactggccg ataaaccggg tcggcgaact gctcccctgg
     1861 cgcgtagcac tgccgactga ataacacatc
//
LOCUS       DADMIB010000324         1880 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.332, whole genome shotgun sequence.
ACCESSION   DADMIB010000324 DADMIB010000000
VERSION     DADMIB010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1880
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.332"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(28..900)
                     /locus_tag="JNZ89_004479"
                     /pseudo
     CDS             complement(28..900)
                     /locus_tag="JNZ89_004479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417258.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
     gene            complement(914..1054)
                     /locus_tag="JNZ89_004480"
     CDS             complement(914..1054)
                     /locus_tag="JNZ89_004480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938105.1"
                     /translation="MSEENKENGFNHVKTFTKIIFIFSVSVFNDNESKITDAAVNLFI
                     QI"
     gene            1193..1864
                     /gene="queE"
                     /locus_tag="JNZ89_004481"
     CDS             1193..1864
                     /gene="queE"
                     /locus_tag="JNZ89_004481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HAY8938106.1"
                     /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
                     EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL
                     PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKH
                     PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
                     YLNIA"
BASE COUNT          557 a          383 c          418 g          522 t
ORIGIN      
        1 tccgggatgg cattttttat ggttgagtta ccagcggccg gatgcgccgc cacctccaga
       61 agaaccgcca ccgccgctaa atccgccgcc acttgagcct ccaccggaac cgctgttgtc
      121 tgaatgataa cttttacctg atgctctttt ctgaagtaca cataaacagg taaagaccat
      181 aaatatggtg aaagtaaaaa agaaggaaaa tacagcaatg gaaaaaattt tatcggagaa
      241 caggaataaa tctaaaagat agattgctga aatacagact ccacttttac atgcgcgaca
      301 aaaattactg ccttgatgaa aaaaccagaa agggaagaac atcactgcaa atacccaaaa
      361 aatagcaaag taataatgat cactggaaga cgctgattca ctttctgaag gattagtcgg
      421 atattggtgt tgtgaagtga gttggttatt caaagcgttt atagctagct ctaatccctg
      481 agcaaatttt tgttgtttaa atgcgggtat catgttgcta cggatgatat ctccagccag
      541 agcatcggtt accttttctt ccagcccata acctacctgg atgcggacag tacgatctga
      601 ccaggcaaca atgatcagta tcccatcatt acgtttggca tctcctaaac gccaattgtc
      661 aaaaactctt gtagcatatt gttcaattgt ctcgtctttg gttgtgggaa caattaatac
      721 agcaatttgc acttgggtat tattgaaaat agattctaac ttgtgcgtca gttctttctt
      781 ttcttgtgag tttaagctac tcgtaagatc cgtaacttgt tactgtaatt gtgggacaat
      841 agttggttgg gctgcaacaa aggaacatac gaaagtgaac attagtatga aatagcgcat
      901 tataaatttc tcattaaatc tggataaata aattgacggc ggcatcggta attttagact
      961 cgttatcatt aaaaactgat acagaaaaaa taaatataat tttggtgaat gttttgacat
     1021 gattaaatcc attttcttta ttttcttctg acataatacg ttactccctt taattattaa
     1081 cgatatgttt cgcatttttc tttaaatctg catgtaacag aatgttaata aggcatgatt
     1141 gttgcggcag gatctgcaat aattaacaat tatccacttc acagagaatg ctatgcagta
     1201 cccgattaac gagatgttcc agaccctgca aggtgagggt tactttaccg gcgtccccgc
     1261 catttttatt cgtttacagg gatgcccggt tggctgtgcc tggtgcgaca ccaaacacac
     1321 ctgggaaaag cttgaggatc gggaagtctc ccttttcagc attctggcga agaccaaaga
     1381 gagtgataag tggggggcgg cgagcagtga agatttgctg gctgtcattg gtcggcaggg
     1441 atataccgcg cggcatgtgg tgattacggg tggtgagcct tgcattcatg atttgctgcc
     1501 actgactgac ctgctcgaaa agaacggttt tagctgccag atcgaaacca gtggaactca
     1561 tgaagtacgc tgcacaccga atacctgggt taccgtatcg ccaaagctga acatgcgcgg
     1621 cggctatgac gtgttgtcac aggcactgga gcgagccaac gaaatcaagc atccagtggg
     1681 gcgcgtacgc gatattgaag cactcgatga actattggca acgctgaccg atgataaacc
     1741 gcgagtcatt gcactgcagc cgattagcca aaaggatgat gccacacgtt tgtgcattga
     1801 aacctgcatt gcgcgtaatt ggcgtttgtc gatgcaaaca cataaatatc taaatattgc
     1861 ctgattaaac atttataagc
//
LOCUS       DADMIB010000325         1816 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.333, whole genome shotgun sequence.
ACCESSION   DADMIB010000325 DADMIB010000000
VERSION     DADMIB010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.333"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(316..1464)
                     /locus_tag="JNZ89_004482"
     CDS             complement(316..1464)
                     /locus_tag="JNZ89_004482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8938107.1"
                     /translation="MSTYTRPVMLLLSGLLLLTLAIAALNTLVPLWLAQEHMSTWQVG
                     VVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRF
                     VAGVGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSV
                     LPWVTGLTLAGILPLLFTRVLNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGS
                     LYGLMPLYLNHKGVSNASIGFWMAVLVSAGILGQWSIGRLADKFGRLLVLRVQVFVVI
                     LGSIAMLSQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS
                     LLGPSFTAMLMQNFSDNLLFIMIASVSFIYLLMLLRNAGHTPKPVAHV"
BASE COUNT          573 a          464 c          396 g          383 t
ORIGIN      
        1 ggttggcgta gttattaaca acgttgccaa aaccccagac agtgataaaa gacatcagcg
       61 caatgttgta ccatcgcagc tgtttttcct gaacattccc agccatagac aaatccttcg
      121 ccaaaattat aggggcatct gtaaaacgag ggattatgcg cggcaaataa gaagtgcgga
      181 aatagcgaaa tgcaaaatta taacctgctg cacattttat ttttaaacga ataaaatttg
      241 gaataaagca agtcagatag aagaaacaaa aaagcagagt gtgaaacagt aagttcacac
      301 tctgcttgaa ttcatttaca cgtgagcaac gggtttcggc gtatgaccgg cgttgcgcag
      361 cagcatcagc aaatagataa acgatacgct ggcgatcatg ataaacaata aattatcgga
      421 gaaattctgc attagcatag cggtaaatga cgggccaagc agacttccca cagtatagct
      481 caacagtaag gcctggttca tcgccaccag ttgatgatgt tcaactttct cgcaagccca
      541 tgccatcgcc accggatata gcgtaaagcc agcggcaccg aggatgaata acgctggggc
      601 catcgccgcc tggctaagca tcgcgatact gccgagaatg acgacaaaga cctgaacacg
      661 caacaccagc agtcgaccaa acttatccgc cagacgtcca atcgaccatt gtccaaggat
      721 acccgcactg accagtaccg ccatccagaa accaatgctg gcattgctca cccctttgtg
      781 attgaggtac agcggcatca ggccatatag agatcccaga acgattcctg agataatgca
      841 gccattcacg ccaagccgcg cctgacggag ttttagcatt gacgtaattg acgtcgaatc
      901 atggttttca gcctgctgat tcagcacacg cgtaaacaac agcggtaaga tccctgccaa
      961 cgtcaaacct gtaacccacg gcaatacgga catcagctcg gttgaaactt tgctgaccag
     1021 taactggcct aaaaacgttc ccacgtaata aaccatcata tacgcagcaa gcaaacgccc
     1081 acggttacgt gacgtcccac tgcacatcag cgcgctctca acaaccaccc aaatcatggc
     1141 acagccgacg cccgcgacaa aacgccaagc caaccagctc cagaatccaa tcatcaggcc
     1201 aaggccggca cagccagcgg caaaaatgaa ggaggccaga taatagctgc ggttaaagcc
     1261 aatgcgctta atgacatacc ctgtcagcaa tgtaccgaca aggttgccgg taaaatagga
     1321 tgagctgaca acgcctacct gccatgtgga catgtgttcc tgggcgagcc aaagcggcac
     1381 gagtgtattt aacgccgcaa tcgccagagt caacaaaagc aggccagaca gcaaaagcat
     1441 gacaggccgg gtatacgtgg acatgaatta aaaccgtgag gaagttcaaa tttcatgcgc
     1501 atcatgccac cgccaaaaca ttgtcaatga gtgaaaatac gcgatatccc agcggcggta
     1561 ttatcgattt atattactca ttcataacgc taatgctgaa gagatgatta gtctcatctg
     1621 attgttttta ttgaactaac acaaatttca tacgcttcgt tcagtcgaaa aatttcatgg
     1681 tcacagcaaa ctcatatttc ccgtctatgc tttcagagca atgcatcgcg tctgatcgat
     1741 ttcagacgta ccactgactc tcgaaaggag aagaggatga ccaaaccgta tgttcgtctt
     1801 gataaaaatg atactg
//
LOCUS       DADMIB010000326         1797 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.334, whole genome shotgun sequence.
ACCESSION   DADMIB010000326 DADMIB010000000
VERSION     DADMIB010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.334"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..181
                     /gene="tnpB"
                     /locus_tag="JNZ89_004483"
     CDS             <1..181
                     /gene="tnpB"
                     /locus_tag="JNZ89_004483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY8938108.1"
                     /translation="LWADRDGLCLFAKRLERGRFVWPVTREGKVHLTPAQLSMLLEGI
                     AWQHPKRTERPGIRI"
     gene            201..>1797
                     /locus_tag="JNZ89_004484"
     CDS             201..>1797
                     /locus_tag="JNZ89_004484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISSfl3 family transposase"
                     /protein_id="HAY8938109.1"
                     /translation="MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQL
                     DRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENRLNTARNLLEDASSVTDSPDTSP
                     PSENPIASKPESPGRKSSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQL
                     DIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIP
                     LYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVL
                     APGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADA
                     YAGYNVLYETGRVKEAGCLAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGS
                     PAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDG
                     WVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLRE
                     VIEKLNDWPSNQVHELLPWNFSSV"
BASE COUNT          490 a          443 c          516 g          348 t
ORIGIN      
        1 actgtgggcc gatcgtgacg ggttatgcct gttcgccaaa cgcctggaac ggggccgctt
       61 cgtctggccg gtgacccggg aagggaaagt gcacctgacg ccagctcagt tatccatgct
      121 actggagggg atcgcgtggc aacatcccaa acggacagaa cggcctggca tccggatata
      181 acccgtgata aaacaaggga atgaacaatg aactccccga tgatattgag ctgcttaaag
      241 ccatgttgcg taagcaacag agtcggcttc gacagtatgc ctgtcaggtc gcgggctatg
      301 agcaggaaat tgaacggctg aaagcgcaac tcgacaggtt gcgtcgtatg ctgttcggcc
      361 agagttcaga gaaaaagcgt cataagcttg aaaatcagat ccgacaggca gaaaaacgac
      421 tgtcggaact ggaaaaccgg ctgaacacag ccagaaatct tctggaagat gcatcgtcag
      481 tcacagattc acctgacacc agtcccccgt cagaaaaccc gatcgccagt aagcctgaat
      541 ccccgggacg aaaatcttca cgaaaaccgc tgccggcaga acttccccgg gagacacatc
      601 gccttctgcc tgctgaaacc agttgcccgg cctgtggagg tgttctgaaa gaaatggggg
      661 aaacaatctc agagcaactg gatatcatta ataccgcctt taaagttatc gaaaccatac
      721 gtcccaaact ggcctgtagc cggtgtgatg tcatcgttca ggcaccactt ccccctaaac
      781 cgatcgaacg cggttatgcc agtgcagggt tacttgcacg gatcctggtc agcaaatata
      841 tggaacatat ccctttatat cgccagtcag aaatatacgc gcgacagggc gtggagctga
      901 gccgtaatac catggtgcgc tgggtatcag aaatggcaga caaactccgt cctctgtata
      961 tagcgctgaa tgactatgtt ctggaggcag gaaaggtgca cgcagatgac actccggtga
     1021 aagtactggc cccggggaac ggaaagacga aaacgggtcg tctgtgggta tacgtcaggg
     1081 atgatcgtaa tgcgggttca tccctgccgg cagccgtctg gttcgcgtat tcggcagatc
     1141 gcaaaggaga acatccgcag ctccacctgg caaagtatca gggcgtactg caggctgatg
     1201 cctatgcagg ttataacgta ctgtacgaaa cgggccgggt gaaggaagcc gggtgcctgg
     1261 cccacgcccg ccgaaaaatc catgacgagg atgtgcgccg tccgacagaa atgactcagg
     1321 aagcgctcag acggatagca gagttatacg acatagaagc ggagatacgt ggcagtccgg
     1381 cagaggaacg gcttgcagtc agaaaagcca gaagcgtcca gttgatgcag tcattgtacg
     1441 actggataca gttgcagagg aaaacgctgt cgaaacatgc ggagatggcg aaggcgttcg
     1501 actatatcct gaatcactgg aatgcgctga acgagttctg tcgtgacggc tgggtggaaa
     1561 tagacaacaa catcggtgaa aacgcgttac gatcggtggc ggttggaaga aaaaattatc
     1621 tctttttcgg ctcagacaag ggaggagaaa gtgcggcgat catctacagt ctgctggtca
     1681 cctgcaaaca gaacgaagtg gagccggagg actggttgcg cgaagtgatc gagaagctca
     1741 atgactggcc gtcgaaccaa gtgcatgaac tgctgccctg gaacttctcg tctgtaa
//
LOCUS       DADMIB010000327         1763 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.335, whole genome shotgun sequence.
ACCESSION   DADMIB010000327 DADMIB010000000
VERSION     DADMIB010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.335"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..278
                     /locus_tag="JNZ89_004485"
     CDS             <1..278
                     /locus_tag="JNZ89_004485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309007.1"
                     /note="oxidoreductase, Fe-S subunit; terminal electron
                     transfer protein for the reduction of DMSO; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit B"
                     /protein_id="HAY8938110.1"
                     /translation="QYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDEL
                     RKKHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
     gene            280..1143
                     /locus_tag="JNZ89_004486"
     CDS             280..1143
                     /locus_tag="JNZ89_004486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HAY8938111.1"
                     /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV
                     IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW
                     LLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF
                     MGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAA
                     LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG
                     LHMTVGMAVAS"
     gene            complement(1178..1759)
                     /locus_tag="JNZ89_004487"
     CDS             complement(1178..1759)
                     /locus_tag="JNZ89_004487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005135793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY8938112.1"
                     /translation="MLVDHQAGLLSLVRDIEPDKFKNNVLALGDQAKYFNLPTILTTS
                     FETGPNGPLVPELKAQFPDAPYIAHPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEV
                     CVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRD
                     WHNDIEGLATLFSNHIPDYRNLMTCYDTLTKQK"
BASE COUNT          379 a          424 c          490 g          470 t
ORIGIN      
        1 cgcaatataa cgaaacgaaa ggccatatga ccaaatgcga tggttgttat gaccgtgttg
       61 cggagggtaa aaagccgatc tgtgttgaat cttgtccgct gcgggcgctg gatttcggcc
      121 ctatcgacga gctgcgtaaa aaacatggcg atctggcggc cgttgcgccg ttgccgcgag
      181 ctcactttac caaaccgaat attgtgatca aacccaatgc caatagccgc ccgaccgggg
      241 ataccactgg ctatctggca aacccgaagg aggtgtgaga tgggaagtgg atggcatgaa
      301 tggccgctga tgatcttcac ggtcttcggg caatgtgtag caggtggttt tatcgttctg
      361 gctttggcgc tgctcaaagg cgacctgcga gcagaagccc agcagcgtgt tatcgcctgc
      421 atgtttggtt tatgggtgct gatgggcatt ggctttatcg cctctatgct ccatcttggt
      481 tcaccaatgc gcgcttttaa ctcgctcaac cgggtagggg cttcagcact cagtaacgaa
      541 atcgccagcg gttcgatctt ttttgccgta ggcggcatcg gctggttgct ggcaatgctg
      601 aaaaagctgt caccggcatt gcgtacgctg tggctgatag tgacgatggt tcttggcgtc
      661 atctttgtct ggatgatggt gcgtgtgtat aacagcattg ataccgttcc gacctggtac
      721 agcatctgga cgccgatggg cttcttcctg acgatgttta tgggcggccc gttactgggt
      781 tacctgttgt tgagtctggc tggcgtcgat ggctgggcga tgcgtctgct gccagcaatt
      841 tctgtactgg cactggtagt gagtggcgtg gtgtcagtga tgcagggcgc agagctggcg
      901 actattcata gttctgtgca gcaggccgca gcgctggtgc cggactatgg tgcgctgatg
      961 tcctggcgga tcgtgctttt ggccgttgcc ctgtgcttgt ggattgcacc acagctaaaa
     1021 ggttatcagc ctgcggttcc gctactttct gtatcattca ttctgcttct ggcaggggaa
     1081 ttaatcggtc gcggcgtatt ctatggtttg catatgaccg tggggatggc cgtcgcaagc
     1141 taatcataac aaccggggtt tcggccccgg ttctctttta tttctgcttc gttaacgtgt
     1201 cataacaggt catcaaatta cgataatcag gaatgtggtt agagaacaac gtcgccagtc
     1261 cttcaatatc attatgccag tcgcgatgca gctcgcacgc cacgccgaac catgtcatca
     1321 attgcgcacc agcttgcgac atgcgatccc atgccgaatg ccgggtaatt tcattaaagg
     1381 tccctgacgc gtcagtcacg acaaagacgt caaacccttc ttcaatggct gaaagcgccg
     1441 ggaatgccac gcaaacttcg gttaccacac cggcaataat taactgtttt ttacctgtcg
     1501 ctttgacagc ttttacaaaa tcttcgttat cccaggcgtt aatatttccc gggtgagcaa
     1561 tgtaaggtgc atcggggaat tgtgctttca gttctggaac taatgggccg ttaggaccgg
     1621 tttcaaaact ggtggtaaga atagttggta agttgaaata cttagcctgg tcacccagcg
     1681 ccagcacgtt atttttaaac ttatcgggtt cgatatcccg tacaagggaa agtaaaccag
     1741 cctggtgatc aacaagcaaa acg
//
LOCUS       DADMIB010000328         1727 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.336, whole genome shotgun sequence.
ACCESSION   DADMIB010000328 DADMIB010000000
VERSION     DADMIB010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.336"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..323
                     /locus_tag="JNZ89_004488"
     CDS             <1..323
                     /locus_tag="JNZ89_004488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2612 domain-containing protein"
                     /protein_id="HAY8938113.1"
                     /translation="APFYNGKSDTRTVDLSDAVYRRLILMKAMSNITDCSVPDINRML
                     RFMFGKKRRAYVLNNGGLRMSYIFESALSLAELAIIQSSGALPSPPGVYVSVVLKESR
                     NEGQ"
     gene            310..840
                     /locus_tag="JNZ89_004489"
                     /pseudo
     CDS             310..840
                     /locus_tag="JNZ89_004489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748478.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            1174..1695
                     /locus_tag="JNZ89_004490"
     CDS             1174..1695
                     /locus_tag="JNZ89_004490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8938114.1"
                     /translation="MDVYANSQRVFRFQNGVAIAFKNIQAGTARKFTLSSANNSTKNA
                     AFYLWGNPSRSVVAELGDDSGWHFFSQRNTDNSITFAVNGQVIPLNYGNFDARYKYRT
                     EGVQDVRYGHEMYYSPGSNTVSWRFRAPSGHGLSGIAISDTGRDSADNVNGVYYRPLQ
                     KLINGTWYNVASV"
BASE COUNT          441 a          380 c          478 g          428 t
ORIGIN      
        1 aggcaccgtt ttacaacgga aaatcggata cccggactgt tgacctgtct gatgctgtat
       61 accggcggct gatactgatg aaagccatgt cgaacattac tgactgttcc gttccggata
      121 ttaaccggat gctgagattt atgttcggaa aaaaacggcg agcttatgtt ctgaataatg
      181 gtgggctgag gatgagttac atctttgagt ccgcgctctc gttggcagaa ctggcgatta
      241 tccagtcgtc gggtgcactg ccgtccccgc cgggtgttta tgtttcagta gttttaaagg
      301 agtcccgtaa tgaaggccag tgataaaccc cgccagctgg cggtcccctt tgcgagtacc
      361 ggagataaaa accgtatccc ggacaaggcg acacagcaga ccagagagag cggtaatgct
      421 gcgtatgatt caggttttcc tccggtgacc atgacagcgg tctcagcggg aggtataccg
      481 ccacacggca aggattttaa cggtctgatg tacgatatta ccgcagcaat acggttcgcc
      541 caggctggcg gtttgtacac gtataatgcc ggttttgcgg gggccattgg tggatatgca
      601 aaaggagcca ttctcgccgg agtcgcaaca acagcggtct ggctgaatac cacagacgat
      661 aacctgaccg atcctgaagg ctccgacagt gcgggctggg taaatcttct tgaggatccg
      721 aaaaggatat tcctgcggca gaagaacaat ctgtcagacc ttcagaataa agggacggta
      781 cgggataatc ttcaggttta cagtaaagag cagtcagatc aacgctatgt tcatcgggaa
      841 ggcgataaaa taaccggaga gctgaaaatc cgtggtgtta atgcgctgag gattttcaac
      901 gaagcttttg gcctgatttt tcgtcgttcg gaagagtgcc tgcaccttat tcccaccagt
      961 gaaggtcagg gggaaaatgg cgatattggt cccctgcgcc cgttcaccat taatttgcgg
     1021 acgggtgaaa tatccatgtc gcataaagtg tctgttggcg gtggttcgca ggtcaatggt
     1081 gcgctgggta tcggcgttca gaacgccctg ggggggaatt caattgttct tggtgataat
     1141 gacaccggat ttaaacagaa tggagacggt attctggatg tttatgctaa tagtcagcgt
     1201 gtattccgct ttcagaatgg agtggctatt gcttttaaga atattcaggc cggaactgcc
     1261 agaaaattca cgttatccag cgccaacaac tccacgaaaa atgcagcgtt ttatttgtgg
     1321 ggtaatccat ccaggtctgt tgttgcagag cttggcgatg attcaggctg gcattttttc
     1381 agccagagga atacagataa cagcatcacg ttcgccgtaa acggacaggt aattccgtta
     1441 aattacggaa acttcgatgc ccgctataaa tatcgaacag agggggtaca ggatgtacgg
     1501 tatggccatg aaatgtatta cagccccggc agtaacaccg tttcgtggag atttcgcgca
     1561 ccttcgggac acgggctgtc agggatagcg atatcggata ccggccgtga ctcagcggat
     1621 aacgtcaacg gcgtgtatta ccgcccgctt cagaaactga ttaatggcac ctggtataac
     1681 gtggcgagtg tttaacaatg ttgcatatta aaaaatatta ctgcggg
//
LOCUS       DADMIB010000329         1715 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.337, whole genome shotgun sequence.
ACCESSION   DADMIB010000329 DADMIB010000000
VERSION     DADMIB010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.337"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..313
                     /locus_tag="JNZ89_004491"
     CDS             <1..313
                     /locus_tag="JNZ89_004491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY8938115.1"
                     /translation="TLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMI
                     LTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHIVQIKGESYRLRQKRKAGVIAEANP
                     E"
     gene            complement(364..582)
                     /locus_tag="JNZ89_004492"
     CDS             complement(364..582)
                     /locus_tag="JNZ89_004492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001520354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY8938116.1"
                     /translation="MTGENRGRGRPRKTESTYADTRNDLIRSGLELLTQNGFLATGVD
                     AIVKNANVPKGSFYYYLKSKEDYAVNDG"
     gene            649..948
                     /locus_tag="JNZ89_004493"
     CDS             649..948
                     /locus_tag="JNZ89_004493"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938117.1"
                     /translation="MTKTVSTSKKPRKQHSPEFRSEALKLAERIGVTAAARELSLYES
                     QLYNWRSKQQNQQTSSERELEMSTEIARLKRQLAERDEELAILQKAATYFAKRLK"
     gene            945..>1715
                     /locus_tag="JNZ89_004494"
     CDS             945..>1715
                     /locus_tag="JNZ89_004494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS3 family transposase"
                     /protein_id="HAY8938118.1"
                     /translation="MKYVFIEKHQAEFSIKAMCRVLRVARSGWYTWCQRRTRISTRQQ
                     FRQHCDSVVLAAFTRSKQRYGAPRLTDELRAQGYPFNVKTVAASLRRQGLRAKASRKF
                     SPVSYRAHGLPVSENLLEQDFYTSGPNQKWAGDITYLRTDEGWLYLAVVIDLWSRAVI
                     GWSMSPRMTAQLACDALQMALWRRTRPRNVIVHTDRGGQYCSADYQAQLKRHNLRGSM
                     SAKGCCYDNACVESFFHSLKVECIHGEHFISREIMRATV"
BASE COUNT          444 a          441 c          454 g          376 t
ORIGIN      
        1 gacgcttcag cgtggagtaa tggccccccg cctgctcatc attgatgaaa taggctatct
       61 gccgttcagt caggaagaag caaagctgtt cttccaggtc atcgctaaac gttacgaaaa
      121 gagcgcaatg atcctgacat ccaatctgcc gttcgggcag tgggatcaaa cgttcgccgg
      181 tgatgcagca ctgacctcag cgatgctgga ccgtatctta caccactcac atatcgttca
      241 aatcaaagga gaaagctatc gactcagaca gaaacgaaag gccggggtta tagcagaagc
      301 taatcctgag taaaacggtg gatcaatatt gggccgttgg tggagatata agtggatcac
      361 ttttcatccg tcgttgacag cataatcctc tttactctta aggtagtaat aaaatgagcc
      421 tttagggaca ttggcatttt taacaatggc atcgactccc gtcgcaagaa aaccattctg
      481 cgtcagcagt tcaaggccac tgcggatcag atcattacga gtatctgcat aggtactttc
      541 tgtctttcgc ggccttcccc ggccacgatt ttcgcctgtc atgtgatctt acccagcaat
      601 agtggacacg cggctaagtg agtaaactct cagtcagagg tgactcacat gacaaaaaca
      661 gtatcaacca gtaaaaaacc ccgtaaacag cattcgcctg aatttcgcag tgaagccctg
      721 aagcttgctg aacgcatcgg tgttactgcc gcagcccgtg aactcagcct gtatgaatca
      781 cagctctaca actggcgcag taaacagcaa aatcagcaga cgtcttctga acgtgaactg
      841 gagatgtcta ccgagattgc acgtctcaaa cgccagctgg cagaacggga tgaagagctg
      901 gctatcctcc aaaaggccgc gacatacttc gcgaagcgcc tgaaatgaag tatgtcttta
      961 ttgaaaaaca tcaggctgag ttcagcatca aagcaatgtg ccgcgtgctc cgggtggccc
     1021 gcagcggctg gtatacgtgg tgtcagcggc ggacaaggat aagcacgcgt cagcagttcc
     1081 gccaacactg cgacagcgtt gtcctcgcgg cttttacccg gtcaaaacag cgttacggtg
     1141 ccccacgcct gacggatgaa ctgcgtgctc agggttaccc ctttaacgta aaaaccgtgg
     1201 cggcaagcct gcgccgtcag ggactgaggg caaaggcctc ccggaagttc agcccggtca
     1261 gctaccgcgc acacggcctg cctgtatcag aaaatctgtt ggagcaggat ttttacacca
     1321 gtggcccgaa ccagaagtgg gcaggagaca tcacgtactt acgtacagat gaaggctggc
     1381 tgtatctggc agtggtcatt gacctgtggt cacgtgccgt tattggctgg tcaatgtcgc
     1441 cacgcatgac ggcgcaactg gcctgcgatg ccctgcagat ggcgctatgg cggcgtacga
     1501 ggccccggaa cgttatcgtt cacacggacc gtggaggcca gtactgttca gcagattatc
     1561 aggcgcaact gaagcggcat aatctgcgtg gaagtatgag cgcaaaaggt tgctgctacg
     1621 ataatgcctg cgtggaaagc ttctttcatt cgctgaaagt ggaatgtatc catggagaac
     1681 actttatcag ccgggaaata atgcgggcaa cggtg
//
LOCUS       DADMIB010000330         1704 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.338, whole genome shotgun sequence.
ACCESSION   DADMIB010000330 DADMIB010000000
VERSION     DADMIB010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1704
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.338"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(822..1061)
                     /locus_tag="JNZ89_004495"
     CDS             complement(822..1061)
                     /locus_tag="JNZ89_004495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858310.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HAY8938119.1"
                     /translation="MPQGGVISPLLSNIILNEFDQYLNKRYLSGKARKDRWYWNHSIQ
                     RGRSTAVKENWQWKPAVAYCCYADDCVPRRRVLGT"
     gene            complement(1256..1613)
                     /locus_tag="JNZ89_004496"
                     /pseudo
     CDS             complement(1256..1613)
                     /locus_tag="JNZ89_004496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707076.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          379 a          474 c          413 g          438 t
ORIGIN      
        1 tcgtcaaaaa aaatcatctt cgtgaagttt tacgacatag tggaggagtt tgcttctttg
       61 aggtgcaggt tttcgtttgc gtggtttagc tgaacgggcc atataactac ctgaaagaca
      121 atgatattgt ctgtttttat aacggtaatc acaggccatg acaagccgca gccgtcaggc
      181 cgcctactcg gggcggttta gaacgcttat ttagtaccag atcttactta taataaaggg
      241 gcttggcagt ttggataaac tattgtcctt attccactaa tacaaacttt ttgtaaagta
      301 tattaaatat acttcatttc atactgaaat ccccggaagt attcaatcaa acaattacac
      361 cataaaagga agagggggcc ccaattaagt tgtcaagcat gtttactgcg caatcgcttg
      421 gtgctccgtc cctgtacccc gcattggtac tctggcgctc atggggcttc cacttgcgct
      481 tctcccttca catcggggtg acaggtccac gttccccaca agagcctgaa tcgacttcac
      541 gccgctttta tgccggatgc cgcgcaggca gtaaacatat cccacaggaa cgactccacc
      601 attgttttga catcatctat atgctttcga cacatcatca gcggttcact ttcgttcgtc
      661 tcttcgaacc atacctgatc ggctcacgtc cgaccttttc ccatctcgct caccaccaca
      721 tctcttaaat gcagcagcag tggatggttt ggtgcctgcg cctgcacgcc gacaccgagg
      781 ggccttccct catctcttgt gccgcatggc tgcacaggga ctcacgtccc caggacgcgc
      841 cttcgtggca cacagtcatc ggcatagcaa cagtaagcaa cggcaggttt ccattgccag
      901 ttttctttga cagcagtact tcggcctcgc tggatactgt gattccagta ccagcgatcc
      961 tttctggctt ttccactcag gtagcgttta ttcagatact ggtcgaactc attcagtatg
     1021 atgttcgaca gcaacggcga gatcacaccg ccctgtggca tattttcact gaccgcccgg
     1081 aagagaccaa catcaacacg gcgttttcca cagcagtctc ataaaacgtg catcactgat
     1141 cctgcggcag acggctttca tcagcagccg gtgatgtact gtgtcgaagt agctggacag
     1201 gtcaccttca ataacccggc gccccgtgtt tccccgcagt cggtgagctg taatagtacg
     1261 tgatgtctcc cgcccacttc tggttcgggc cactggcgta aaaatcctgc gtcagcagat
     1321 tttctgatac aggcaggccg tgtgcacggt aactgatcgg gctgaacttc tgggaggctt
     1381 ttgcgctcag ttcctgacgg cgcagactgg ctgccacggt ttttacgtta aagtggtaac
     1441 cagagcacac agttcatccg tcaggcgtgg ggcaccgtaa cgctggactg ggtaaaagcc
     1501 ttgcggacaa cgctgtcgca gtgctgacgg aactgctgac gtgtgtttat ccttgtccgc
     1561 cgctgacacc acgtatacca gccgctgcgg gccacccgga gtacgcggca cattgccttg
     1621 atgacggttt acgcggtcgc ctgcggcaac ggctttccgg ctgacggtag tgtggacctt
     1681 tttaccccgg agaacaccgg caag
//
LOCUS       DADMIB010000331         1674 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.339, whole genome shotgun sequence.
ACCESSION   DADMIB010000331 DADMIB010000000
VERSION     DADMIB010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.339"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(151..1341)
                     /locus_tag="JNZ89_004497"
     CDS             complement(151..1341)
                     /locus_tag="JNZ89_004497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SopA family protein"
                     /protein_id="HAY8938120.1"
                     /translation="MLREVSISNDTISVKFYRNEKIECACNFLMDKDSQGYIDLSDFD
                     VTNCHFKGDVISKVSFLSSNLQHVTFECKEIENCNFTKATVDNVIFKCRRLHNVIFLK
                     TSGEYVDFNQDILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKE
                     ISFIKSNLTAVMFDHVRMSTGNFKDCITEQLELTIDYSDIFGNEDLDGYINNIIKMID
                     TLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFSHCPYIKDPIIRSYIHSGE
                     DNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNNFFIQLIDQALRSTDDM
                     IKANAWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIFILFSSVDDGPVMVV
                     SSQR"
BASE COUNT          568 a          299 c          255 g          552 t
ORIGIN      
        1 ctcatatgac ggacctctgt aatgcggtat ccaacccgcg aatatcagcg tgattcaccg
       61 tcggatttac tgctacgtcg ccctcaggga attaaaccta aaaagaaaat cgtcaaaatt
      121 agagattccg gtttgacacg gaaagtcata ttagcgctgg gagcttacca ccataacagg
      181 cccatcatcg acagaggaga acaggataaa tatattatcg tttcgtgtta atttattagt
      241 gttaaaggtt cttaactttt cttcagtttc tataaatata ggtgaaacat catcactacg
      301 aatccactct ttataaagat accaggcatt tgctttgatc atatcatccg ttgatcgtaa
      361 ggcctgatcg ataagttgga taaaaaaatt gttattttta tcaatcagcc ctttattcat
      421 attaaacctg ttaataaaat ggatcatctg ttgggtatcg aaatccacct tgctgaatcg
      481 atgttgacgc ataaaatcat cgaacttgtt atcttcacca gaatggatat aactgcgtat
      541 aattggatct tttatataag gacaatggct aaatgttttc ttcatattct caataaagtt
      601 tttattaaca atattaagaa tttttaattg cataaccagt tttactgcca gaacggattt
      661 caatatcatt gcattatctg gcaatgtatc aatcattttt ataatgttat tgatataacc
      721 atcgagatct tcattcccaa atatatctga ataatcaata gttaattcca attgttctgt
      781 aatgcaatct ttaaaattcc ctgtcgacat tcgcacatga tcaaacataa cagctgtcaa
      841 attcgattta ataaatgata tttctttggc agacagaaac tctgctctgg tgaagtgcga
      901 agcgtaaaga taacaattat cgaagtttga atttctaatc tgacattcgc gaaaattact
      961 atgaccaagt tgactctgcg agaagtcaac tgtatcaaga atatcttggt taaaatcaac
     1021 atattcgcca ctcgttttga gaaaaatcac attgtgtaaa cgtcgacatt taaatatgac
     1081 attatcaact gttgccttag taaaattgca attctcaatt tctttacatt cgaaagttac
     1141 atgttgtaga tttgatgata aaaaagacac cttagaaata acgtcacctt taaaatgaca
     1201 atttgttaca tcaaaatcag acaggtcgat atacccctgc gaatctttat ccatcagaaa
     1261 attacaagcg cattctattt tttcatttct gtagaatttt acacttatag tatcattact
     1321 aattgagact tcacgtaaca tatttattgc atgatttttt cgttccgttg ttttatattt
     1381 aaaaatatat tactgatata aataaagtta tctctgttta aacctgtcac cccattgaaa
     1441 ttacgtagta aatcaagatc tactatatta tttccttgaa ccacatcatg tttcatcaaa
     1501 gagttattgc caccagaatt tgtgatatga cctatcataa aacctctgta atacagaaat
     1561 aaaataacct ggaaaagtag cctgagcgtc cagacactac cggcgaaagg aaaagaatct
     1621 ctgataaggc attgagataa tggacattct tagtgaagaa gaagtgaagt acta
//
LOCUS       DADMIB010000332         1667 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.340, whole genome shotgun sequence.
ACCESSION   DADMIB010000332 DADMIB010000000
VERSION     DADMIB010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.340"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            13..1268
                     /locus_tag="JNZ89_004498"
                     /pseudo
     CDS             13..1268
                     /locus_tag="JNZ89_004498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000535347.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YccE family protein"
     gene            1561..>1667
                     /locus_tag="JNZ89_004499"
     CDS             1561..>1667
                     /locus_tag="JNZ89_004499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine acid phosphatase"
                     /protein_id="HAY8938121.1"
                     /translation="MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVL"
BASE COUNT          547 a          262 c          342 g          516 t
ORIGIN      
        1 tagacgctat atatgggtag taatatacat ggaattagtt gcactgcaaa taattatttg
       61 aaacaggcct ggaacgatat aaaaaatgag tacgaaaaaa atcaaacata ttcaatcacg
      121 ctttttgaaa acacactggt gtgttttatg cggttataca atgaactcag acgtaaagta
      181 aatgaagagg atactccatg tctggaatgt gaatcactag aaaaagaatt tgaggaaatg
      241 cagaatgata atgatctatc attatttatg agaacattgc gtactaatga tacacaaatt
      301 tattcagggt ttcaggaggt attacatata ctatacaata tgttcaaaat gttgatattg
      361 ttagagtgtc cttgccgggc agaggttcag agtctatcac agattttaaa ggttattatt
      421 ggtatggctt tatggaatat attgaaaaca ttactgcgtg tgatgatgtt ttttctgagt
      481 attgtttaga tgatgaaaat atgagtatcc agccagaaca gataaatacg ccgggaatat
      541 ctgatttaga tactggtatt gatttgtctg gcatatcttt tattcagagt gaaattaata
      601 aaacatatgg attaaaatac gctccagtag atggcgatgg atattgtctg ttaagagcca
      661 tactggtttt aaaagaacat gagtattcat gggcgctggg cggccataag acgcaaaagc
      721 aagtatacga agagtttatt aaaattgttg ataaacaaac gatcgaggct cttgttgata
      781 cggcattcta taatctcagg gaagatgtaa agacgttatt tggcgttaat ctacaatctg
      841 acaacaaaat tcaggggcag ggtggttttt tatcatggag ttttttgtct tttaaaaaag
      901 aatttattga tagttgcttg aatgacaaaa aatgcatact gcatttaccc gaatttatat
      961 ttaatgataa caaggtacgc cttgttttag acaccgaccc agagcagagg gttaatgagg
     1021 tgaaaaattt cctcactgct ctttcagata gcatttgctc attatttatt gttaatagta
     1081 atatggcatc aatctccttg gggaatgaat ccttttcaac agatgacgac cttgagtatg
     1141 gttatttaat aaacactggc aatcattatg atgtttacct ccctcctgaa ctttttgctc
     1201 aggcttataa gttaaaaaat aaggaaatga atgcgcaact cgactattta aatcgttatg
     1261 caatttaatg gcaaaggcat atgctaaaaa ccattgttat tagtctcaca cttttttatt
     1321 ggtaaatatt gtctctgtat tggtaacgcc gaagatattc tgtttagcca caggtgcaat
     1381 tatcagcggc gtacgcgagg caggggctaa tcaggcatag tttgcgtcaa accttgcctg
     1441 tttttgaaga tgtatataga aaaacaggcg ttcaacaagc cattttgcga acctgttccc
     1501 ggaaaaaagt catatttctg tcacactctt tagtgattga taacaaaaga ggtgccagga
     1561 atgaacaaaa cgctaatcgc cgcagctgtg gcagggatag ttttactcgc ttcaaacgct
     1621 caggcacaaa ccgtaccgga aggctatcag ctacagcaag tgctcat
//
LOCUS       DADMIB010000333         1650 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.341, whole genome shotgun sequence.
ACCESSION   DADMIB010000333 DADMIB010000000
VERSION     DADMIB010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.341"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..950)
                     /gene="corA"
                     /locus_tag="JNZ89_004500"
     CDS             complement(<1..950)
                     /gene="corA"
                     /locus_tag="JNZ89_004500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HAY8938122.1"
                     /translation="MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQS
                     ELGQSLATRPELEDIEASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
                     TLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSR
                     VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
                     ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
                     GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL"
     gene            1320..>1650
                     /locus_tag="JNZ89_004501"
     CDS             1320..>1650
                     /locus_tag="JNZ89_004501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938123.1"
                     /translation="MAHRLLIGKGMITLNLKRIFLTLTLLPLFSVAADDCALSDPTLT
                     VQAYTVNPQTERVKMYWQKANGEAWGTLHALLADINSQGQVQMAMNGGIYDESYAPLG
                     LYIENGQQ"
BASE COUNT          428 a          427 c          412 g          383 t
ORIGIN      
        1 tacaaccagt tcttccgctt aaagtacaga tacggtgcca ggcccgcgag gatcataaag
       61 ataatcgcgc cagggtagcc gaagctccac ttcagttctg gcataaactc aaagttcatg
      121 ccatagctgg aagcaacgag cgtcggcggc aggaatacca cggataccac cgagaagatt
      181 ttgatgatgc ggttctgctc gatgttgata aaacccatcg ccgcctgcat caggaagttc
      241 accttctgga acagagattc gttatgcggc agcagggatt cgatatctcg caggatttca
      301 cgcgcctgct ccagttgtcc acccggtaag cgtgctttac gtaccaggaa gttgagcgcg
      361 cgctgggtat ccatcagaca caggcgtact ttccagccga tatcttccag ttccgccagc
      421 gtggagagcg cctcatcgta ctcatcgccc tgatgccctt ccataatcac ccggctcaac
      481 tgctccaggt cgctatagat attttcaatt tcatctgcca actgttcgat tttggtttcg
      541 aacagatcca gcagcagctc gtaggcgtta ccgtctacca tcgactggct acgggcacgc
      601 atacgataca gacgaaaagc gggcagttca cgctcacgca gagtaaacag acgaccatca
      661 cggatggtaa atgccacagt ggagttaccg gcgtgatctt ccgcatcttc aaagaagaag
      721 aaggagtgaa tatgcaggcc gtcgtcgtct tcaaagaaac gtgccgatgc ttcgatgtct
      781 tccagttccg ggcgggttgc caggctctgg ccaagttcag attgtacacg cagtcgctcg
      841 tcgtcgtccg gttcgacaag atcaatccat actgcattta caaggggttg tgactcttcg
      901 acttccagcc gggtcagtcg gttattttcc agttgaaatg cgctcagcat gaccgggact
      961 cccaatgctt aaaatatcgg acagttcggt gggcacacag aaacaaattg ggtttcagac
     1021 cattaaacag cctgactcag cgcgacggga aaaattgagg tcgctgacaa ccgctaaggc
     1081 tatcagcaaa aagggatagc cttaggagtt gatcctggat gacaggatag tgagccagta
     1141 tctactgggt gtgtccaagg cgaatgtcct cttagaatga tcgtgcgcgc atgttacgcc
     1201 agcaaaattt tgccgtcaac acgcaacaga acaccacaga acaatagttg aacttcacgc
     1261 tttttggtac tcctcaaggt cgctaacagg ataaaaaaat cccacatcca ggacctataa
     1321 tggcgcatcg gctactcatt ggtaaaggaa tgatcacctt gaatctcaaa cggatttttc
     1381 tcaccctcac cttacttccc ttgttttctg ttgccgctga tgattgcgca ctctcagatc
     1441 cgacgctgac cgtacaggcg tataccgtta atcctcaaac agagcgggtg aaaatgtact
     1501 ggcaaaaagc caatggcgaa gcgtggggaa cgttacatgc tctgctggcg gatattaata
     1561 gtcagggtca ggtgcagatg gcgatgaacg gcggcatcta tgatgaaagc tatgcgccgc
     1621 tcggtttgta catcgaaaac ggtcagcaga
//
LOCUS       DADMIB010000334         1620 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.342, whole genome shotgun sequence.
ACCESSION   DADMIB010000334 DADMIB010000000
VERSION     DADMIB010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.342"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..1577)
                     /locus_tag="JNZ89_004502"
                     /pseudo
     CDS             complement(1..1577)
                     /locus_tag="JNZ89_004502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001433765.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          420 a          411 c          349 g          440 t
ORIGIN      
        1 caaaaaggca aacagatccg aagcgggata atctttttgg ggagaattgt tccagttagc
       61 aatatatccc gacagggggt tatacacctt agggttcatt tcaaaaggca atagcccttt
      121 ccagtcccat tttcccgtac caggaacggg taatcgcgga tcatggcctg attgacgatc
      181 tggataagca ccagtatgaa cataaccaat attgccgttt acatcagcat agtaccagtt
      241 gatggtcagt gcttgtttcg ctactcctgc caatttttgg ccttcatctg atgagtccag
      301 gccagcaaag acgccacctc tttaccatcc catgcgcggg atttagcgta agccgtttgt
      361 gtcgtctggt cagtttggag aatgttgcca tgcaccgtac gccagacagt aaaggtctct
      421 gcctgaccat ttttcaccgt aatggtttcc tcacggctta acattttcac ccacttacaa
      481 ttatgtaagt agtagcctgg tttctctgcc gacagccgtt cagcaaaaat atcgacatca
      541 tcgccgaaac ctgccgttga tccccaggaa atcacaccat tatgaccaaa aaccagccca
      601 ggataggcaa atggtgtatt gccagtgaca tcataaccag caccgtgcag accaatacca
      661 taagtatacg caggcgcata ccagccaaac tgcggaccat ttaccatgat tgctttcgca
      721 tcctgggctt tgcttttgcc gatcacccac atattgctgg tcgttggata ccccgccaga
      781 ccattggcac caccctgtgc aaattgtgca gcaatagttt cccggttctt ccctgctgtt
      841 aacgccagca gtgcgccatc cgcccctttt gctggtcggt caagcattgg tgcaggtaaa
      901 tcgtagcgtg gcaacagagc tgctgtttgc gagttttgct gattaaattt aagtgggtag
      961 ctactctctt gtacggcaat agtggttggc gctgatgggt ttaccagcca tttcaactga
     1021 ttaaataccg ccatgccttg tgatacacca tatttatctt ttaaagccgt tagcagtgcc
     1081 agattatcaa tttcgctagt gctatcagag aagcggtttg ccatggtgcc cacaaatatc
     1141 atcgcgacat caaacggttc ccagcgctta ggagtaaagc caaatgtatt aaactgtttt
     1201 ggtaagagcg tctctggatt ggtatttacc ttatcaatcc aggcattcat tccatcagcg
     1261 tagccttgca gaatggacat atcctctggg gaaagggcat caatttgcgc ccggatagca
     1321 tccggccagt agttacgacg gatatcttta tcaaatttca caaaatcttt gccaagcact
     1381 tccgcgacag tcccttgagt actgcgacgt gccatttcca tctgaaaaag gcgatcttgt
     1441 gctactacat agccatagcc ataaaatagg tgccatgtat cattggcata aatatgcggc
     1501 atgccgtatt catcgcgaac aatctttatc tcacttgacg actgctcagc cagtgcaggt
     1561 aagctccaat aatacatcag ggaagcagta acacagttca cgatcatacg atttctattt
//
LOCUS       DADMIB010000335         1617 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.343, whole genome shotgun sequence.
ACCESSION   DADMIB010000335 DADMIB010000000
VERSION     DADMIB010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.343"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>1617
                     /locus_tag="JNZ89_004503"
     CDS             <1..>1617
                     /locus_tag="JNZ89_004503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8938124.1"
                     /translation="PEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLNRREV
                     LHTQGEAGLKRVVKKEHADGSVTQSQFDAVGRLRTQTDAAGRTTEYSPDVVTGLITRI
                     TTPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDIIRYRYDNPH
                     SDLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQY
                     RAYDSRGQLIAVKDTQGHETRYEYNAAGDLTAVIAPDGSRNGTQYDAWGKAIRTTQGE
                     LTRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRS
                     EDEGLVTHWHYDEADRLTHRTVNGETAEQWQYDKRGWLTDISHLSEGHRVTVHYRYDE
                     KGRLTGERQTVHHPQPEALLWQHETRHAYNAQGLANRCIPDSLPAVEWLTYGSGWLAG
                     MKLGDTPLVDFTRDRLHRETLRRFGRYELSTAYTPAGQLQSQHLNSLQYDRDYTWNDN
                     GELIRISSPRQTRSYSYSTTGRLTGVHTTA"
BASE COUNT          397 a          494 c          486 g          240 t
ORIGIN      
        1 ggccggaaat ccgttaccgt tacgacagcg acgggcgggt gacagaacag cttaacccgg
       61 caggcttaag ctacacgtat cagtatgaga aggaccgcat caccatcacc gacagcctga
      121 accgccgtga agtgctgcac acgcagggtg aagccgggct gaagcgggtg gtgaaaaagg
      181 aacacgcgga cggcagcgtc acgcagagtc agtttgacgc cgtgggcagg ctcaggacac
      241 agacggatgc cgcaggccgg acaacagaat acagcccgga tgtggtgacg ggcctcatca
      301 cgcgcatcac cacgccggat ggcagggcat cggcgtttta ctataaccac cacagccagt
      361 taacgtcagc caccgggcct gacgggctgg aaatacgccg ggaatatgat gaatggggcc
      421 gtctgattca ggaaactgcc cctgacggcg atatcatccg ctaccgttat gataatccac
      481 acagtgactt accctgcgca acggaagatg ccaccggtag ccggaaaacc atgacgtgga
      541 gccgttacgg tcagttgctg agcttcaccg actgttccgg ttatgtaacc cgttatgacc
      601 atgaccgctt cgggcagatg acggcggtgc accgcgagga agggctgagt cagtaccgcg
      661 catacgacag ccgtggacag ttaattgccg tgaaagacac gcagggccat gaaacgcggt
      721 atgaatacaa cgccgccggt gacctgaccg ccgtcattgc cccggacggc agcagaaacg
      781 ggacacagta cgatgcgtgg ggaaaggcca tccgtaccac gcagggcgag ctgacgcgca
      841 gtatggaata cgatgctgca ggacgggtca tccgcctgac cagtgaaaac ggcagccaca
      901 ccaccttccg ttacgatgta ctcgaccggc tgatacagga aaccggcttt gacggccgca
      961 cacagcgtta tcaccacgac ctgaccggca aacttatccg cagcgaggat gaggggctgg
     1021 tcacccactg gcactatgac gaagcagacc gcctcacgca ccgcaccgtg aatggcgaaa
     1081 ccgcagagca gtggcagtat gacaaacgag gctggctgac agacatcagc catctcagcg
     1141 aagggcaccg ggtgacggtg cattacaggt atgatgagaa aggccggctg accggtgagc
     1201 gccagacggt gcatcacccg cagccggaag cactgctctg gcagcatgag accagacatg
     1261 cgtacaacgc gcagggactg gcgaaccgct gtataccgga cagcctgccc gccgtggaat
     1321 ggctgaccta cggcagcggc tggctggcag gtatgaagct cggcgacaca ccgctggtgg
     1381 atttcacccg cgaccgcctg caccgggaaa cgctgcgccg cttcggccgt tatgaactct
     1441 ccaccgctta cacccctgcc gggcagttac agagccagca cctgaacagc ctgcagtatg
     1501 accgcgatta cacctggaac gacaacggcg aactcatccg catcagcagc ccgcgccaga
     1561 cccggagtta cagctacagc accaccggca ggctgaccgg cgttcacacc accgcag
//
LOCUS       DADMIB010000336         1612 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.344, whole genome shotgun sequence.
ACCESSION   DADMIB010000336 DADMIB010000000
VERSION     DADMIB010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.344"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            13..1566
                     /locus_tag="JNZ89_004504"
     CDS             13..1566
                     /locus_tag="JNZ89_004504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000807159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY8938125.1"
                     /translation="MSEFARCHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPEDL
                     CTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKIS
                     KDIESGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENL
                     HALKEKRLNGMPKTTPKSGQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSII
                     PPLKNYNERLHNTNLFNPKYQKKAVMNYMEYLVTCQLDEQQMSSLLYERDDLSAIDFS
                     LLMKTIKAFSFGGDLQTLASKPGSTISSIPSERRILININHDFPNNGNLFNDFLFNHQ
                     QDEQLAMAYMAALPFSRPLVYWDGQVLKSTTEIKNYDGSTRVGGEAWLNKGCSTYQQL
                     YNEFHALYIDKAGIWSAFEGVFATKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVEG
                     TWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFTLRGGTLNINIPGRSALLLGKT
                     GEPPNYLYL"
BASE COUNT          555 a          304 c          312 g          441 t
ORIGIN      
        1 atcagggaaa atatgtctga gtttgcacgt tgccattatg ggtatataca aatccctcca
       61 gtgacaactt tccgcgccga cggaccagaa actcccgaag aagaaaaagg ttactggttt
      121 catgcttatc aacccgaaga tctttgtacc atccataacc caatgggaga tttgcaggat
      181 tttatcgcat tggttaaaga tgctaaaaaa tttggtatcg atatcattcc tgattataca
      241 tttaacttta tgggaatcgg gggtagtggt aaaaatgacc tggattatcc ctctgctgat
      301 atacgagcga agatcagtaa agatatagaa agcggtatcc ctggctattg gcaaggtcag
      361 gttttgattc cattcattaa agatccagta acaaaagaac gtaaacaaat ccatccagaa
      421 gatatacatc tcactgcaaa agacttcgaa gcaagtaaag ataacatctc taaggatgaa
      481 tgggaaaacc tccatgcatt aaaagaaaag cgtttaaatg gaatgcctaa aacaacaccc
      541 aaaagtggcc aggttattat gttgcaaaat caatacgttc gagaaatgcg aaaatatggc
      601 gtacgaggtt tacgttatga tgcggcaaaa cactcaaaac atgaacaaat agagaggtcg
      661 ataatcccac cgcttaaaaa ttataatgag cggttacaca atactaattt atttaaccca
      721 aaatatcaaa aaaaagccgt tatgaattac atggaatacc tggtaacttg tcagttggat
      781 gaacaacaaa tgtcatcact gctttatgag agagatgatt taagtgccat tgatttttct
      841 ttactcatga aaacgataaa agccttttca tttggtggag atctccaaac ccttgcatca
      901 aaaccgggtt ccacaatctc aagtatccca tcagaaagac ggatattgat taacattaac
      961 cacgattttc ctaacaatgg taatcttttc aatgactttc tatttaacca tcaacaagat
     1021 gaacaattag caatggcata tatggccgct ctcccgttca gcagaccttt agtttactgg
     1081 gatggccaag tattaaaatc aacgactgaa attaaaaatt atgatgggtc cacgcgtgtc
     1141 ggcggtgagg cgtggcttaa taaaggttgc tctacctatc agcagctcta caatgaattc
     1201 cacgcattat atatagataa agcaggaata tggagcgcat ttgagggtgt atttgcaact
     1261 aaaaacgttc tggcctttag tcgtggggat tctgtgaaca ttaatcactc tcctcatgat
     1321 gggctagtta taataaataa aggaaacgaa gaagttgaag gtacctggcc taacaaattg
     1381 caacctggaa tatacaaaaa catggggagt aatagcgtta acattattat taataatacc
     1441 cgaaaaatta tcccccctgg taaagtattt acgcttagag gcggaactct aaatatcaat
     1501 attcctgggc gtagcgctct tcttttaggg aaaacaggag aaccgccgaa ctatctctat
     1561 ttataattta atgttatatc tgccccgata aaacggggca gataatatgt tt
//
LOCUS       DADMIB010000337         1589 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.345, whole genome shotgun sequence.
ACCESSION   DADMIB010000337 DADMIB010000000
VERSION     DADMIB010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.345"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            4..597
                     /gene="argO"
                     /locus_tag="JNZ89_004505"
     CDS             4..597
                     /gene="argO"
                     /locus_tag="JNZ89_004505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine exporter ArgO"
                     /protein_id="HAY8938126.1"
                     /translation="MILPLGPQNAFVMNQGIRRQYHIMIALLCAISDLVLICAGIFGG
                     SALLMQSPWLLALVTWGGVVFLLWYGFGAFKTAMSSNIELASAEVLKQGRWKIIATML
                     AVTWLNPHVYLDTFVVLGSLGGQLDVEPKRWFALGTISASFLWFFGLAILAAWLAPRL
                     RTAKSQRIINLVVGCVMWFIALQLARDGIAHAQALFS"
     gene            690..1430
                     /locus_tag="JNZ89_004506"
     CDS             690..1430
                     /locus_tag="JNZ89_004506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative stress defense protein"
                     /protein_id="HAY8938127.1"
                     /translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDI
                     ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG
                     KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
                     AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA
                     AIQFDDQVDVVFQLEPVDQQPAKTPAAQ"
BASE COUNT          375 a          373 c          437 g          404 t
ORIGIN      
        1 gctatgattc tgccgctcgg cccacaaaat gcttttgtga tgaatcaggg cattcgtcgt
       61 cagtaccaca ttatgattgc cttactttgc gctatcagcg atttggtcct gatttgcgcg
      121 gggatttttg gtggtagcgc gttattgatg cagtcgccgt ggttgctggc gctggtcacc
      181 tggggcggcg tagtcttctt gctctggtat ggttttggcg cttttaaaac agcgatgagt
      241 agtaatattg agttagctag tgccgaagtc ctgaagcaag gcagatggaa aattatcgcc
      301 accatgttgg cagtgacctg gctgaatccg catgtttacc tggatacttt tgttgtactg
      361 ggcagccttg gcgggcagct tgacgtcgaa ccaaaacgtt ggtttgcgct cgggacaatt
      421 agcgcctctt tcctgtggtt ctttggtctg gctattctcg cagcctggct ggcaccgcgc
      481 ctgcgcacgg caaaatcaca gcgcattatc aatctggtag tgggatgtgt catgtggttt
      541 atagccttgc agctggcgag agacggtatt gctcatgcac aagccttgtt cagttaggcg
      601 ctatctgatg gaaaaataaa acagaggcgc taagcttgcc tccagaggtc ctgaattttg
      661 ggcaagtcaa ttaacacgga gagactaacg tgaagttcaa agttatcgcc ctagcggcat
      721 taatgggtat tagcgggatg gcagcgcagg ctaacgaatt gccggatgga ccgcatattg
      781 tcacctccgg tacggcaagt gtggatgcgg tgccagacat tgccactctt gcgattgaag
      841 ttaacgtggc cgcgaaggat gccgctacag ccaagaaaca ggcagatgag cgcgtcgcac
      901 aatacatttc cttccttgaa ctcaatcaga tcgcgaaaaa agatatcagc tcagcgaatt
      961 tacgcaccca gccagattat gattatcagg atggtaaaag tatcctgaaa ggctaccgcg
     1021 ctgtgagaac ggtggaagtc acgctccgtc agttagacaa actgaattcc ttgctggatg
     1081 gcgcgctgaa ggcgggtctt aacgaaattc gttcagtgtc gctgggcgtg gcgcagccgg
     1141 atgcctataa agacaaagcg cgtaaggcag cgattgataa cgcgattcat caggcgcagg
     1201 aactggcgaa cggctttcat cgtaaactgg ggccggtata tagcgtgcgc taccatgttt
     1261 ccaactatca gcccagccca atggtgcgga tgatgaaagc cgatgccgcg ccggtgtctg
     1321 cccaggaaac ttacgagcag gccgctattc agtttgatga tcaggtcgat gtggtcttcc
     1381 agttagaacc tgtggatcaa caacccgcta aaacacctgc agcacaataa tacttgtagc
     1441 ccgacgtatt cgtcgggcta atgcctttac ccgatattgc ctcctttttc tgtaattttc
     1501 tgtaaaacca tgacgtaatc acctatcttt gctcgcggtt tcatcaagga taggctgact
     1561 gaaacggtta agcggacaag gatgcgggg
//
LOCUS       DADMIB010000338         1584 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.346, whole genome shotgun sequence.
ACCESSION   DADMIB010000338 DADMIB010000000
VERSION     DADMIB010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.346"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(70..492)
                     /locus_tag="JNZ89_004507"
     CDS             complement(70..492)
                     /locus_tag="JNZ89_004507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938128.1"
                     /translation="MKIRHEHIESVLLALAAEKGQAWVANAITEEYLRQGGGELPLVP
                     GKDWNNQQNIYHRWLKGETKAQREKIQKLIPAVLAILPRELRHRLCIFDTLERRALLA
                     AQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVVVH"
     gene            complement(476..703)
                     /locus_tag="JNZ89_004508"
     CDS             complement(476..703)
                     /locus_tag="JNZ89_004508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8938129.1"
                     /translation="MLKIDAIAFFGSKTKLANAAGVRLASIAAWGELVPEGRAMRLQE
                     ASGGELQYDPKVYDEYRKAKRPGKVIHENQA"
     gene            780..1187
                     /locus_tag="JNZ89_004509"
     CDS             780..1187
                     /locus_tag="JNZ89_004509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8938130.1"
                     /translation="MKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQ
                     PAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPAILTEDQKELLQLFDALPES
                     EQKALLSEMRARVENFNKLFEELLKARKRSANK"
     gene            1391..1543
                     /locus_tag="JNZ89_004510"
     CDS             1391..1543
                     /locus_tag="JNZ89_004510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706802.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 domain-containing protein"
                     /protein_id="HAY8938131.1"
                     /translation="MDTIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTEAGARRW
                     LAKNTS"
BASE COUNT          447 a          415 c          325 g          397 t
ORIGIN      
        1 ccgaaccttc ctccggatat aatctgtgat tccccaatca acagaaccag aggaggttcg
       61 gcataaacat caatgcacaa cgacagaatc gtcggacgac ccaccaccgc tgaaatgtgc
      121 tttccggtaa acggcctgaa ctgcgtcatc atgcgcatca attgccgtac tcaacgcttc
      181 ctgcgccgcc agtaatgcac ggcgttccag ggtatcgaag atacagagtc ggtgacgcag
      241 ctcacgcgga agaattgcca gaaccgcagg gatcagtttc tgaattttct ccctttgcgc
      301 tttcgtttca cctttcaacc aacggtgata gatattctgc tgattgttcc agtccttgcc
      361 tggtaccaga ggcaattcgc cgcccccctg ccgcagatat tcttcagtaa ttgcgttagc
      421 gacccacgcc tgcccttttt cggctgccag ggctaacagc actgattcga tgtgctcatg
      481 cctgattttc atgaatcacc ttcccaggtc gttttgcctt acgatattcg tcataaactt
      541 tggggtcgta ctgaagttcc ccgccagatg cctcttgcag gcgcatcgcg cgaccttcag
      601 gaaccagttc cccccatgca gcaatgcttg ccagcctaac tcctgcggca ttggcaagct
      661 ttgttttgct gccaaaaaac gctatagcat caattttcaa catatcgagc tccttagatt
      721 ttcctaagaa aactagatcg tagagaaacc taagtcaaga aagattagaa ttccctaata
      781 tgaaaaacga aaccttcggt gctcgcctct tacataggcg taaaaaatta aaactgtctc
      841 aggccgcatt aggtaagctg gtcaaagtgg ctcacgtaac aatttctcaa tgggaaagag
      901 atgaaacaca gccggcgggg aaaagattat tcgcactgag ccaagcgctt cagtgctcac
      961 cgacttggct tctttttggg gatgaagata aacaaccagg cgaaccgatc ccggataatc
     1021 agccagccat tctgacagaa gatcaaaaag agttacttca actgttcgac gcactgcctg
     1081 agtcagagca aaaggccctg ttgtcagaga tgcgtgctcg agttgaaaat ttcaacaaac
     1141 tttttgaaga actactcaaa gctcgcaaaa gaagcgcaaa caaataatcc ccttttttct
     1201 ccacaccctg taataaaaag cacaaacttt caaacacttg tgttttttac atcaaaaaaa
     1261 cttaggtttt ttatacataa aatcttgact ccacgtctta ggttattcta aattccattc
     1321 atcaagacac cgcacggtgt tctcagcaaa cagttccact accccggcgt taaggggaaa
     1381 tgaggtcagc atggatacta tcgatcttgg caacaacgaa tccctagtgt gtggcgtgtt
     1441 tcccaatcag gacggcacat tcaccgccat gacgtatacc aaaagcaaaa cgtttaaaac
     1501 cgaagctggc gcacgtcgct ggcttgccaa aaataccagc taatccattt attggattaa
     1561 ttcaatattc tcgctgtaga ggta
//
LOCUS       DADMIB010000339         1574 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.347, whole genome shotgun sequence.
ACCESSION   DADMIB010000339 DADMIB010000000
VERSION     DADMIB010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1574
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.347"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..91
                     /gene="yoaK"
                     /locus_tag="JNZ89_004511"
     CDS             <1..91
                     /gene="yoaK"
                     /locus_tag="JNZ89_004511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YoaK family small membrane protein"
                     /protein_id="HAY8938132.1"
                     /translation="GIIFPVVIFITAVVFLAWFFIGGYAAPGA"
     gene            94..168
                     /gene="yoaJ"
                     /locus_tag="JNZ89_004512"
     CDS             94..168
                     /gene="yoaJ"
                     /locus_tag="JNZ89_004512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YoaJ"
                     /protein_id="HAY8938133.1"
                     /translation="MKKTTIIMMGVAIIVVLGTELGWW"
     gene            complement(227..475)
                     /locus_tag="JNZ89_004513"
     CDS             complement(227..475)
                     /locus_tag="JNZ89_004513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HAY8938134.1"
                     /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGG
                     WISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS"
     gene            complement(623..805)
                     /locus_tag="JNZ89_004514"
     CDS             complement(623..805)
                     /locus_tag="JNZ89_004514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1869 domain-containing protein"
                     /protein_id="HAY8938135.1"
                     /translation="MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVN
                     TVRSYDTENEHDVCGW"
     gene            complement(809..1169)
                     /gene="yeaR"
                     /locus_tag="JNZ89_004515"
                     /pseudo
     CDS             complement(809..1169)
                     /gene="yeaR"
                     /locus_tag="JNZ89_004515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310533.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
     gene            complement(1342..>1574)
                     /locus_tag="JNZ89_004516"
     CDS             complement(1342..>1574)
                     /locus_tag="JNZ89_004516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HAY8938136.1"
                     /translation="FFVQFIDVNAPHTGISFFILATTLELVSFCYLSFLIISGAFVTQ
                     YIRTKKKLAKVGNSLIGLMFVGFAARLATLQS"
BASE COUNT          432 a          375 c          350 g          417 t
ORIGIN      
        1 cggtattatt tttccggttg taatctttat tacagcggtc gtatttttag catggttttt
       61 tattggcggc tatgctgccc cgggggcata aagatgaaaa aaacaacgat tattatgatg
      121 ggtgtggcga ttattgtcgt actcggcact gagctgggat ggtggtaacg tcacctctaa
      181 aaaatagcaa aggctgcctg tgtgcagcct ttgtgcaatt taagcgttaa cttttaatct
      241 tcctgtagat aaatagcacg acaatcgcac caataacggc aaccacgaag ctgccaaaat
      301 tgaagccatc gactttacca aagccaaaca gcgtgctgat ccatccgccg actacggcac
      361 cgactatccc cagcaggata gtcataaaga atccaccacc atctttacct ggcatgatcc
      421 acttcgccag aataccggca ataagcccaa aaataatcca tgacagaatg cccattgttt
      481 cctcacttat ctgttttgca ttagcgggtt agtcgctgat aaaaagcata gcacaacatc
      541 gggagggcaa gatttgtgac gagcatcacg gaggattttt ttgcgatggc gcagaaattg
      601 cgccatcaac gatcagtgat aattaccaac cacaaacatc atgttcgttt tccgtgtcat
      661 aagaacgcac ggtattcacc agatctttta tcacttcagc cgccacttct ggcaccagca
      721 aagtcatcgg cgtctctgtt tcataatcga cagaaacgcc attactgtta ttggtgacgg
      781 tcacggtata cgttgctttg cccatgattc atttcccgtt atgaatgact ttccgttgtt
      841 gcgcaccttc catcaggact tcaggagcca cgaagaagtc aatgttgaca taagtatcgt
      901 cagtcatggc ttcaatgttg tgccactttt ctggagggaa caccgcaaac tgccccgctt
      961 cgataaggat cacctgatca ggctctgcac tgtgttcatc agcgtagccg agatatttga
     1021 ccgccccatg cataacggaa aggcgtgggt aacccccctg gcgcgttcct ttatcaagat
     1081 gacgttcgaa ttattccggc aggcgcagtt tgtttattcc agaaaggcgt tgagcgcgta
     1141 tgaatataat tctgtgggat ttgcagcatc cttttccctc cttcggtgaa tgcgctgaaa
     1201 acggtttatt ccagccgttt cagggtacgc ctgataattt gcattttaaa taccatttat
     1261 tggttacttt ttagcaccat atcagagaaa aatcagggag gattacaagt gggaagcccg
     1321 cgacaacgcg ggctgaatgt atcaggattg cagcgtcgcc agtcgggcgg cgaaacccac
     1381 gaacatcaaa ccaatcagtg agttgccaac tttagccagt ttctttttgg tacgtatgta
     1441 ctgcgtgaca aaagcaccag aaataatcag gaagctcaaa tagcagaaac tcaccagttc
     1501 cagcgtcgtc gccagaataa agaatgaaat tcccgtatgt ggggcattaa catcgataaa
     1561 ctgtacgaaa aacg
//
LOCUS       DADMIB010000340         1556 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.349, whole genome shotgun sequence.
ACCESSION   DADMIB010000340 DADMIB010000000
VERSION     DADMIB010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.349"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            25..627
                     /locus_tag="JNZ89_004517"
     CDS             25..627
                     /locus_tag="JNZ89_004517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001437057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY8938137.1"
                     /translation="MENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKR
                     GQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRP
                     DGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMI
                     APFSDEVMKVTGLNGKASSAKVHFYAINDFGGTIEGNASL"
     gene            662..1556
                     /locus_tag="JNZ89_004518"
                     /pseudo
     CDS             662..1556
                     /locus_tag="JNZ89_004518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414681.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
BASE COUNT          455 a          338 c          340 g          423 t
ORIGIN      
        1 gatcaaaaaa gtgtcaacgt acgtctggaa aataaaggga ataacccgtt gcttgtccag
       61 agttggttag atactggcga tgacaacgct gagcctggca gtattacagt cccttttact
      121 gccacgccgc cagtatcgcg tattgatgcc aaacgtgggc aaacaatcaa attaatgtac
      181 acagccagca cctcactgcc taaagacaga gagagcgtgt tctggtttaa cgtactggaa
      241 gttccaccaa aaccagatgc agaaaaggtc gcgaatcaaa gtctgctgca actggcattt
      301 cgcacacgta taaaactttt ctatcgcccg gatggattga agggaaatcc ctctgaagcc
      361 ccgttagccc tgaagtggtt ctggtcaggt tcagaaggta aggcgtcatt gcgagtgacc
      421 aatccaaccc cttactacgt ctcttttagc agtggtgatt tagaagctag cggtaaacgc
      481 tatccgattg atgtgaaaat gattgcacca tttagtgatg aggtcatgaa agtcactggc
      541 cttaatggca aagcaagttc tgcaaaagta catttttacg ccattaatga ttttggtggc
      601 accattgaag gtaatgccag tctgtaatca ggcaaggata taattccgca ggaagcataa
      661 cgtgactata aaaccaacta aaaattatca taatcatctg acccgtatcg ctacgttttg
      721 cgcgctgctg tattgcaata gtgctttctg tgctgaactt gttgaatatg accatacctt
      781 cctgatgggg cagaatgcct caaatattga tctcagccgg tatagtgaag gtaaccctgc
      841 tataccgggt atgtacgacg tcagtgttta tgtcaacgat caacctatta ttaaccaaag
      901 cattacattt attgaaattg aaggaaaaaa aacgcacaag cctgtatcac acttaagaat
      961 ttattgcagt ttcatataaa ttctcccgat ataaataacg aaaaagccgt tctgcttgcc
     1021 agggatgaaa cactcggcaa ttgccttaat ttgacggaaa ttatccctca ggcttctgtt
     1081 cgttatgacg ttaacgagca acgtctggat atagacgttc ctcaggcatg ggtaatgaaa
     1141 aattaccaaa actatgttga tccatcgtta tgggaaaatg gcattaatgc ggccatgttg
     1201 tcatacaacc tcaacggata tcatagtgaa actcctggtc gaagaaatga cagcatttat
     1261 gctgctttta acggtgggat gaatttaggt gcatggcgac tgcgtgcctc aggcaactac
     1321 aactggatga ccgattctgg cagtaattat gattttaaga atcggtatat acagcgtgat
     1381 atcgcctcgc tgcgttctca actcattctt ggtgagtctt atacaacagg cgaaaccttt
     1441 gattctgtca gtatccgcgg cattcgttta tacagcgaca gccgcatgtt gcctccgaca
     1501 ttagcgagtt ttgcgcctat cattcatggc gttgctaata ccaacgccaa agtcac
//
LOCUS       DADMIB010000341         1493 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.351, whole genome shotgun sequence.
ACCESSION   DADMIB010000341 DADMIB010000000
VERSION     DADMIB010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1493
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.351"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>1493
                     /gene="pdeB"
                     /locus_tag="JNZ89_004519"
     CDS             <1..>1493
                     /gene="pdeB"
                     /locus_tag="JNZ89_004519"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeB"
                     /protein_id="HAY8938138.1"
                     /translation="LPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDAL
                     QELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEPG
                     KISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN
                     AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQK
                     GWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLA
                     NGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH
                     PQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISR
                     YREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLK
                     LKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL"
BASE COUNT          395 a          351 c          366 g          381 t
ORIGIN      
        1 ctgcctgtcg gcttaagcat ctggctggcc catcagcagg tagaaacatc gtttattgaa
       61 gagctggata cctattcctc ccgcgtcgct attcgggcca ataaggtggc gacacaaggg
      121 aaagatgcgc tgcaagagct ggaaagatgg caaggcgctg cctgtagcga agcccatctc
      181 atggaaatgc gtcgggtatc ttacagttat cgctatattc aggaagtggt ttatatcgat
      241 aacaacgttc cccagtgttc gtctctggag catgaaagtc cgcccgatac cttccccgag
      301 ccaggtaaaa tttcgaaaga tggttatcgt gtctggttaa catcgcataa cgatttaggc
      361 attatccgtt acatggtcgc catgggaacg gcacattatg tcgtcatgat cgaccccgct
      421 tcctttattg atgtcattcc ctatagctca tggcaaattg atgccgccat tattggcaat
      481 gcccataacg ttgtcataac cagcagcgat gaaattgctc agggaattat taccaggcta
      541 caaaaaacac ccggtgagca tatcgaaaat aatggaatca tttacgatat cctgcccttc
      601 ccggagatga atatttcgat catcacctgg gcttcaacga aaatgttgca gaaaggctgg
      661 catcggcaag tctttatttg gttaccgctc gggttggtga ttggcctgct ggcagcgatg
      721 tttgtgctgc gtattttgcg ccgtatccag tcaccgcatc atcggctgca ggatgctatc
      781 gaaaatcgtg atatttgcgt gcactatcag ccgattgtct ccttagccaa tggcaaaatt
      841 gtcggtgctg aggcactggc gcgctggccg caaacagacg gtagttggtt gtcaccagat
      901 agttttattc cgctggcaca gcaaacaggc ctttctgagc cattgacgct actgattata
      961 agaagcgtct ttgaagatat gggcgactgg ctgcgtcagc atccacagca gcatatttcg
     1021 atcaatcttg aatccaccgt gctcacctcg gaaaaaatcc cgcaattgct gcgtgaaatg
     1081 atcaatcact atcaggttaa tcccagacag atcgcgcttg aactcactga acgcgagttt
     1141 gccgatccga aaaccagcgc cccgataatt tctcgctacc gggaggcggg ccatgaaatt
     1201 tatcttgatg attttggtac gggatattca agtttaagtt atttacagga tctggatgtc
     1261 gacattctga agatcgataa atctttcgtt gatgcgctgg aatataaaaa tgtcacgccg
     1321 catatcatcg aaatggcaaa aacactgaaa ctgaaaatgg tagcggaggg aatcgaaacc
     1381 agtaaacaag aagagtggct acgccagcat ggcgtgcact acggtcaggg ctggctctac
     1441 agcaaggcat taccgaaaga agatttctta cgctgggccg agcaacattt gtg
//
LOCUS       DADMIB010000342         1491 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.352, whole genome shotgun sequence.
ACCESSION   DADMIB010000342 DADMIB010000000
VERSION     DADMIB010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1491
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.352"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            223..882
                     /locus_tag="JNZ89_004520"
     CDS             223..882
                     /locus_tag="JNZ89_004520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011152976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-1 chloramphenicol O-acetyltransferase"
                     /protein_id="HAY8938139.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAF
                     LKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETF
                     SSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNV
                     ANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
                     A"
     gene            complement(1083..1460)
                     /locus_tag="JNZ89_004521"
     CDS             complement(1083..1460)
                     /locus_tag="JNZ89_004521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8938140.1"
                     /translation="MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSG
                     QLHIKELYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGG
                     RINDHIVNYYLHGESLSKLASGI"
BASE COUNT          395 a          331 c          353 g          412 t
ORIGIN      
        1 gacgcacttt gcgccgaata aatacctgtg acggaagatc acttcgcaga ataaataaat
       61 cctggtgtcc ctgttgatac cgggaagccc tgggccaact tttggcgaaa atgagacgtt
      121 gatcggcacg taagaggttc caactttcac cataatgaaa taagatcact accgggcgta
      181 ttttttgagt tatcgagatt ttcaggagct aaggaagcta aaatggagaa aaaaatcact
      241 ggatatacca ccgttgatat atcccaatgg catcgtaaag aacattttga ggcatttcag
      301 tcagttgctc aatgtaccta taaccagacc gttcagctgg atattacggc ctttttaaag
      361 accgtaaaga aaaataagca caagttttat ccggccttta ttcacattct tgcccgcctg
      421 atgaatgctc atccggaatt ccgtatggca atgaaagacg gtgagctggt gatatgggat
      481 agtgttcacc cttgttacac cgttttccat gagcaaactg aaacgttttc atcgctctgg
      541 agtgaatacc acgacgattt ccggcagttt ctacacatat attcgcaaga tgtggcgtgt
      601 tacggtgaaa acctggccta tttccctaaa gggtttattg agaatatgtt tttcgtctca
      661 gccaatccct gggtgagttt caccagtttt gatttaaacg tggccaatat ggacaacttc
      721 ttcgcccccg ttttcaccat gggcaaatat tatacgcaag gcgacaaggt gctgatgccg
      781 ctggcgattc aggttcatca tgccgtttgt gatggcttcc atgtcggcag aatgcttaat
      841 gaattacaac agtactgcga tgagtggcag ggcggggcgt aattttttta aggcagttat
      901 tggtgccctt aaacgcctgg ttgctacgcc tgaataagtg ataataagcg gatgaatggc
      961 agaaattcga aagcaaattc gacccggtcg tcggttcagg gcagggtcgt taaatagccg
     1021 cttatgtcta ttgctggttt accggtttat tgactaccgg aagcagtgtg accgtgtgct
     1081 tctcaaatgc ctgaggccag tttgctcagg ctctccccgt ggaggtaata attgacgata
     1141 tgatcattta ttctgcctcc cagagcctga taaaaacggt tagcgccggg gttggatttt
     1201 tcagcgttcc agctaaggct aaggcattcc tgttcaagcg caagccgggc tataaagcgc
     1261 attatcgctt tacccgtgcc cttatttcga tcgcactgag aaacatacag ctctttaata
     1321 tgcagctgac cgctgtatcg gggcgaggga taaagaatat tgcaacatgc caggccagta
     1381 atgttattgc cgcagcgcgc tctgatcacc agggtaccgg aaagccggtt gaataacttt
     1441 ttacagagat aatccttcat caacgcttcc tgaatgatac cttcgccata a
//
LOCUS       DADMIB010000343         1485 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.353, whole genome shotgun sequence.
ACCESSION   DADMIB010000343 DADMIB010000000
VERSION     DADMIB010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1485
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.353"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..730)
                     /gene="pdeC"
                     /locus_tag="JNZ89_004522"
     CDS             complement(<1..730)
                     /gene="pdeC"
                     /locus_tag="JNZ89_004522"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HAY8938141.1"
                     /translation="MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRT
                     FAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDN
                     HFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFSSGYKMTYMQRGNYVAVINPL
                     FWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVY
                     STKRPIAAIVATSYQRLITHFYNHL"
     gene            1160..1441
                     /locus_tag="JNZ89_004523"
     CDS             1160..1441
                     /locus_tag="JNZ89_004523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938142.1"
                     /translation="MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISS
                     GLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT"
BASE COUNT          429 a          325 c          333 g          398 t
ORIGIN      
        1 taagatgatt ataaaaatgg gttataagac gttgatatga agtcgcaaca atggctgcaa
       61 ttgggcgttt tgtcgaataa actgtcgcat ataaatagcc atttctttgt acggttaaat
      121 ccttcaaatg aatcagcgga gaaaacgttg ctgccgaggc ctctttgctt aacgagaaaa
      181 aggttttcgt caccgtatca tacacacccc attgcaatgt cggatcatca gacatcactt
      241 cactccagaa gagagggttg ataaccgcca cataatttcc ccgctgcata taggtcattt
      301 tatagccaga ggaaaaaggc gtatcgcggt aataatagat agaaacgtta ggttcacgct
      361 tataatcggc cggtgcaatc gtatagccgt ttacaggcgc tatcagcgat gagcataaaa
      421 aatggttatc acgggcatag atcaattcat taatataaag atagccacga ataatattca
      481 acattcgctt ttgatgggct ggagtgcaaa cttgcccctg atagcgttca gctgcatcgc
      541 tcactaaatc tgcctggcga atgaccagct cggatttatc cagtgccagt tgagcaaagg
      601 ttcggagctg attattcact tctgattttg cccaaaggaa ggcaatccat agcgaaagaa
      661 tgatgggaaa gagaactaaa aagataatgc ccggcaacgc cagtaattgg tgtcgtgcac
      721 gatgactcat tgctatcaat ttcctgcctg tttatacccg gccattgtaa ggtgaaaacc
      781 ctgggtaccg acgtctttag ataaatctta cggtataaat agcacttttg cctgatttga
      841 aattgatacc tttctaatcg tcacctggat gaaaataatt cattgatatt caaaattaat
      901 ttcctacagg aatgcagagg cggcgggaag atatgccctt aatgccactg aaaaaccaca
      961 taatctgtac agcaataaaa gtcacggcct aatatggcta acaaacaatc aattgtgata
     1021 tatttcacaa aattaatgaa acaaacagag tgtttcattt ttgtgttctg caagccccgc
     1081 gatagccaga gtgtaccacg cctcccgtga acaacgccgc gctgtccagg gcatcggctc
     1141 ttttcagagg aattgtttga tggctaccct caccactggc gtggttcttc ttcgctggca
     1201 acttcttagt gccgtaatga tgtttctggc cagcacactc aacatccgtt ttcgtcggtc
     1261 tgattatgtc gggcttgcgg tgatcagcag cggtctgggc gttgtttccg cctgttggtt
     1321 cgcaatgggg ttgcttggca tcacaatggc ggacatcacc gctatctggc acaacatcga
     1381 gtcggtgatg atagaagaga tgaatcagac accgccacaa tggccaatga ttttgacctg
     1441 atacgtagaa gcctccataa cggagtaatg ccgatcagtt aagga
//
LOCUS       DADMIB010000344         1446 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.354, whole genome shotgun sequence.
ACCESSION   DADMIB010000344 DADMIB010000000
VERSION     DADMIB010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1446
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.354"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(147..1007)
                     /locus_tag="JNZ89_004524"
     CDS             complement(147..1007)
                     /locus_tag="JNZ89_004524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A broad-spectrum beta-lactamase TEM-57"
                     /protein_id="HAY8938143.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLDRRIHYSQNDLVE
                     YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
                     DRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
                     LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
                     EIGASLIKHW"
     gene            complement(1190..>1446)
                     /locus_tag="JNZ89_004525"
     CDS             complement(1190..>1446)
                     /locus_tag="JNZ89_004525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY8938144.1"
                     /translation="DMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRT
                     VDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS"
BASE COUNT          379 a          355 c          319 g          393 t
ORIGIN      
        1 gggtctgacg ctcagtggaa cgaaaactca cgttaaggga ttttggtcat gagattatca
       61 aaaaggatct tcacctagat ccttttaaat taaaaatgaa gttttaaatc aatctaaagt
      121 atatatgagt aaacttggtc tgacagttac caatgcttaa tcagtgaggc acctatctca
      181 gcgatctgtc tatttcgttc atccatagtt gcctgactcc ccgtcgtgta gataactacg
      241 atacgggagg gcttaccatc tggccccagt gctgcaatga taccgcgaga cccacgctca
      301 ccggctccag atttatcagc aataaaccag ccagccggaa gggccgagcg cagaagtggt
      361 cctgcaactt tatccgcctc catccagtct attaattgtt gccgggaagc tagagtaagt
      421 agttcgccag ttaatagttt gcgcaacgtt gttgccattg ctgcaggcat cgtggtgtca
      481 cgctcgtcgt ttggtatggc ttcattcagc tccggttccc aacgatcaag gcgagttaca
      541 tgatccccca tgttgtgcaa aaaagcggtt agctccttcg gtcctccgat cgttgtcaga
      601 agtaagttgg cagcagtgtt atcactcatg gttatggcag cactgcataa ttctcttact
      661 gtcatgccat ccgtaagatg cttttctgtg actggtgagt actcaaccaa gtcattctga
      721 gaatagtgta tgcggcgatc gagttgctct tgcccggcgt caacacggga taataccgca
      781 ccacatagca gaactttaaa agtgctcatc attggaaaac gttcttcggg gcgaaaactc
      841 tcaaggatct taccgctgtt gagatccagt tcgatgtaac ccactcgtgc acccaactga
      901 tcttcagcat cttttacttt caccagcgtt tctgggtgag caaaaacagg aaggcaaaat
      961 gccgcaaaaa agggaataag ggcgacacga aaatgttgaa tactcatact cttccttttt
     1021 caatattatt gaagcattta ccagggttat tgtctcatga gcggatacat atttgaatgt
     1081 atttagaaaa ataaacaaat aggggttccg cgcacatttc cccgaaaagt gccacctgac
     1141 gtctaagaaa ccattattat catgacatta acctataaaa ataggcgtat cacgaggccc
     1201 tttcgtcttc aagaatttta taaaccgtgg agcgggcaat actgagctga tgagcaattt
     1261 ccgttgcacc agtgcccttc tgatgaagcg tcagcacgac gttcctgtcc acggtacgcc
     1321 tgcggccaaa tttgattcct ttcagctttg cttcctgtcg gccctcattc gtgcgttcta
     1381 ggatcctccg gcgttcagcc tgtgccacag ccgacaggat ggtgaccacc atttgcccca
     1441 tatcac
//
LOCUS       DADMIB010000345         1417 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.355, whole genome shotgun sequence.
ACCESSION   DADMIB010000345 DADMIB010000000
VERSION     DADMIB010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.355"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..695)
                     /locus_tag="JNZ89_004526"
     CDS             complement(<1..695)
                     /locus_tag="JNZ89_004526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY8938145.1"
                     /translation="MLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSISGE
                     NRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALK
                     ELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMS
                     LELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQL
                     SPRIMQTLLQQTA"
     gene            complement(1011..>1417)
                     /locus_tag="JNZ89_004527"
     CDS             complement(1011..>1417)
                     /locus_tag="JNZ89_004527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HAY8938146.1"
                     /translation="AASTRAGESKIKHKISHDVFETYPAALHGQFDSISMFYLLHCLP
                     GNISTKSCVIRNAAQALTDDGTLYGATILGDGVVHNSFGQKLMRIYNQKGIFSNTKDS
                     EEGLTHILSEHFENVKTKVQGTVVMFSASGKK"
BASE COUNT          411 a          248 c          300 g          458 t
ORIGIN      
        1 tgggcggttt gttgtaacaa agtttgcatt attctgggag atagttgatt ttctctaaga
       61 ttgacaacgc tatcagaact gaggccaagt atgctttccg gaattgccgt gatccggttc
      121 tgattaagcc agaatattct tataatatga tcatctcttt ctggaaaatc tggtattact
      181 tccaaagcat ttctggctgc atcaagtaat tccaatgaca ttggtaacct cggaagtaca
      241 gacaggtgat tgtcacttac gttaatatat tctagtgacg caggtaattc aggaagtgcg
      301 aacaaatggt tatcactcac atttatatat tccagcgaca ctggtaattc aggaagtgca
      361 gataattgat tactgcttgc attcagttct ttcaatgccc ttggtagctc ggggagcatt
      421 gatagttggt tattgcttac attaatttca tcaagattgt caggcaatcg tggtagagat
      481 ctgagaccta aacaagataa gtccaacgat gtttcactgt tctccagaca taattggagc
      541 cgggtaaaag cagtttccct gttttctccg gaaatgctgt ttttagtcca ttcaacccat
      601 tcggagagat aattattgtg aacattgtcg attgatgtag ttctgtaaaa agagacgttt
      661 ccagtggata gggggggatt atttacagga agcataataa cctcgcagaa ggatatcctg
      721 ataaaatgtg atactgggaa ataataagct aaaataaaat gtttcaggat tgaaatttat
      781 tgttttcatt ttaaggaagt gatgttgatt taactgtaaa aaaacgatac tattttctta
      841 gatggtaaat gtctcgcctg tgctatattt tgtttttcgg ttagttaaat atcgtacgtt
      901 catatttgaa tgttctgccg gaatgcatta tcaatagagg taaagtcgca accccaaatc
      961 gtaaaggaaa ccgtagcacg tcttaagcaa gaacgtgctg cggttggatg ctattttttc
     1021 cctgaagcag aaaacattac tacagtacct tgaaccttgg ttttaacatt ctcgaaatgc
     1081 tctgagagta tatgtgttaa gccttcttcg gaatcttttg tgtttgaaaa gatgcctttc
     1141 tgattgtaaa tgcgcatcag tttttgaccg aagctattgt gcacaactcc atcgccaaga
     1201 attgtggctc cgtatagagt tccatcatca gttaaggcct gcgccgcatt gcgtattaca
     1261 cagctttttg tagatatatt tccaggcagg cagtgaagaa ggtaaaacat ggaaatggaa
     1321 tcaaattgac catgtaacgc cgcgggataa gtttcaaaaa catcatggct aattttatgt
     1381 ttaatttttg attccccagc ccttgtagat gccgcgt
//
LOCUS       DADMIB010000346         1409 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.356, whole genome shotgun sequence.
ACCESSION   DADMIB010000346 DADMIB010000000
VERSION     DADMIB010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.356"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..125)
                     /gene="ariR"
                     /locus_tag="JNZ89_004528"
     CDS             complement(<1..125)
                     /gene="ariR"
                     /locus_tag="JNZ89_004528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm/acid-resistance regulator AriR"
                     /protein_id="HAY8938147.1"
                     /translation="MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNL"
     gene            complement(154..426)
                     /locus_tag="JNZ89_004529"
     CDS             complement(154..426)
                     /locus_tag="JNZ89_004529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YmgA"
                     /protein_id="HAY8938148.1"
                     /translation="MKTSDNERIKYEITGQVVLQILRMKINFSLQTLIKQLLVMKSAE
                     EDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH"
     gene            complement(469..705)
                     /locus_tag="JNZ89_004530"
     CDS             complement(469..705)
                     /locus_tag="JNZ89_004530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YcgZ"
                     /protein_id="HAY8938149.1"
                     /translation="MHQNSVTLDSAGAITRYFAKANWPTQQETLGEIVTEILKDGRNL
                     SRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE"
     gene            1019..>1409
                     /gene="bluF"
                     /locus_tag="JNZ89_004531"
     CDS             1019..>1409
                     /gene="bluF"
                     /locus_tag="JNZ89_004531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="blue light-responsive regulator BluF"
                     /protein_id="HAY8938150.1"
                     /translation="MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNG
                     SHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHER
                     DDVLQAVFDKGTSKFQLTYDDRALQFFR"
BASE COUNT          413 a          289 c          252 g          455 t
ORIGIN      
        1 attaaattgg tgacagcctg ccctaacact gctgactctt cttctaacaa attacccgaa
       61 ctgcgaaagt aacttgctaa cgctttatca gttattgcat tatgaattgt agtatcttca
      121 agcatggtaa cctctcatct tacttatgaa attttaatgt attctgttta ttttcttacc
      181 attgaacata cttttattgt cagctgtcgc tgttcttcgg tttggccctc ctgaatcact
      241 attgctaaaa tcacgaatta tgctgtcaat taaatcgcgt cggaaagcat cttcctcagc
      301 cgatttcatt acgagtaatt gcttaataag agtctgcaat gaaaaattta tcttcatgcg
      361 cagtatctgg agcaccacct ggccagtaat ttcatatttt atacgttcat tatcagatgt
      421 cttcataacg acttcatagc taacctgtta aataatcagg ctgttgcatt attcaaaaag
      481 caacccaatt agtgcattat aatgtttctg ttcctcttcc ccagtcgcgt gttccagtcg
      541 gcaaagaagt ttggcacaaa gcgactttcg actcagatta cgtccatctt tcaaaatctc
      601 agtcacaatt tccccgagag tttcctgctg agtaggccag ttagcttttg caaagtaacg
      661 agtgattgct cccgcagaat ctaaagtcac tgaattttga tgcatgctac gcctctgtta
      721 aaaatgttaa tcaatgttaa gtgaggtaac aatagcaaac ttgtacgaaa tatgtgtaca
      781 gaatgataaa ttaatttttt gcaattagtg ccaatacata taaaacaatg tgttatgata
      841 aaacatattg catcatttaa ctgacaatct atacgagatt tttcgccaac tagtgttcaa
      901 ctttttccat tttttatcaa tgtaaagaaa cggttatgtt ttggtattaa aagaaagaca
      961 caagaagata tgtctgttac cgtcttactc tcgcctcacc cattaccctg gattgttaat
     1021 gcttaccacc cttatttatc gtagccatat acgtgacgac gaacctgtca aaaaaatcga
     1081 agaaatggtt tcgatagcaa atcgcaggaa catgcagtct gacgtaacag ggatcttact
     1141 gtttaatggt tctcattttt tccagcttct ggaaggtccg gaagaacagg ttaaaatgat
     1201 atatcgggct atatgccagg atccacggca ctataatatt gttgagctgc tgtgcgatta
     1261 cgcgcctgct cgccgttttg gcaaagcggg aatggaatta tttgatttgc gcctgcacga
     1321 gcgagatgac gttttacagg ccgtattcga caaaggcaca tcaaaatttc agctaactta
     1381 tgatgacaga gcgctacaat tttttcgta
//
LOCUS       DADMIB010000347         1398 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.357, whole genome shotgun sequence.
ACCESSION   DADMIB010000347 DADMIB010000000
VERSION     DADMIB010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.357"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            8..691
                     /locus_tag="JNZ89_004532"
     CDS             8..691
                     /locus_tag="JNZ89_004532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000856940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HAY8938151.1"
                     /translation="MKTQHDHYDRLSVRLSVIISRLLAGESLELKALADEFGVSERTL
                     QRDFQQRLIHLDLEHSSGSYRLTCRTGREHSPNTFAFIRNSGISGIIPAQNRRLIRLI
                     TSNSGSSPCLIGHGGLPSPVTQTACFLELAEAIRDYRAVTLLVNGKSYEAVAPRRLIF
                     QSKNWFLVATRTRNLQVFRMEDVNAVTVLDTSFRRKPELDALTASEEFISALPHFRFI
                     SDVIQTFRE"
     gene            730..>1398
                     /locus_tag="JNZ89_004533"
     CDS             730..>1398
                     /locus_tag="JNZ89_004533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001683509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HAY8938152.1"
                     /translation="MNDPVKGEGRMITDASGVTRREGGILGMWSNIFPERNGSNEQKG
                     DSKPHIPDIRDILDIFPQPLREKLLNKISEAIDYEPVIGVMGKTGAGKSSVCNALFKG
                     EVCAVSDVEACTREVQELRIRFGKHSLKIIDIPSVGENARRDKEYEYLYRNLLPSLDL
                     ILWVIKGDDRAFSADEHFYNNVLLPAGGGERVLFVLNQVDKIEPFREWDTHLHQPSPA
                     QRINI"
BASE COUNT          364 a          333 c          346 g          355 t
ORIGIN      
        1 ccccactatg aaaacacagc atgatcatta tgaccgcctg tccgtcaggc tatcggtcat
       61 tatcagccgc ttactggctg gcgaatctct ggagcttaaa gcgttagctg atgaatttgg
      121 tgtctcagaa cgcaccctac agagggattt tcagcaacgc ctgatccatc tggatctcga
      181 gcattccagc ggaagctacc gacttacctg ccgaacgggc cgggagcact cacccaacac
      241 atttgcgttc atccgtaatt ccgggatttc agggattatt ccggctcaga atcgcaggtt
      301 aattcgactg attaccagta actccggaag ctcaccgtgc cttatagggc atggagggct
      361 gccatctcca gttacacaaa ccgcctgttt tctggaactg gcggaagcta tccgtgacta
      421 ccgcgccgtt acattattag ttaacggtaa aagctacgaa gcagtagctc cccgccgtct
      481 gatatttcag tccaaaaact ggtttcttgt tgctacccgc accagaaatt tacaggtgtt
      541 tcggatggaa gatgttaacg ccgtaaccgt tctggatacc tcttttcgca gaaagcctga
      601 acttgatgct ctgactgcca gtgaagagtt tatttcagcc ctccctcact ttcgtttcat
      661 aagtgacgta attcagacct tcagagagta acagacaacg ttcatttcaa attaaaaagg
      721 agacctcgta tgaatgaccc ggtaaagggc gaaggccgga tgattactga tgccagtggc
      781 gtcaccagaa gggaaggcgg gattttggga atgtggagca atatatttcc agaacgtaat
      841 ggtagcaacg agcaaaaagg tgatagcaag ccgcacatac ccgacatcag ggatattctt
      901 gatattttcc ctcagccact gcgggaaaag ctgttgaaca aaatcagtga agccatcgac
      961 tatgaacccg tgattggtgt catgggaaaa actggcgcgg ggaaaagcag cgtatgtaat
     1021 gcgctgttta aaggggaggt ttgtgcagtt agcgacgttg aggcatgtac tcgcgaagtt
     1081 caggaattgc gtatacgctt cggcaaacat tcgctaaaga tcattgatat acctagtgtc
     1141 ggtgagaatg cccggcggga caaggagtat gaatatttat accgtaattt gcttccctcc
     1201 ctggatctta tcctgtgggt aataaaagga gacgatcggg ccttttctgc ggatgagcat
     1261 ttctacaata atgttctgct ccctgctggt gggggtgagc gcgttttatt cgtcctcaac
     1321 caggttgata aaattgagcc attccgcgag tgggatactc atctgcatca gccatctcct
     1381 gcacagcgca tcaacatc
//
LOCUS       DADMIB010000348         1347 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.359, whole genome shotgun sequence.
ACCESSION   DADMIB010000348 DADMIB010000000
VERSION     DADMIB010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1347
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.359"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            219..1166
                     /locus_tag="JNZ89_004534"
     CDS             219..1166
                     /locus_tag="JNZ89_004534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001361319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HAY8938153.1"
                     /translation="MKNVLVTVPSFSARCVSASKLLRENNFNLIIKNNVEHLLKSEST
                     ALRESICAVIAGKDCYQADTLSLLPGVKIISRFGTGIDNIDLRAAQQSGIVVNNAVGI
                     NSNAVAEFIIGLIFASMRNIPGSYHAMQNGYWGESHGYELQGKRIGMVGYGNIGKTLA
                     KRLSGFDVELLAYDKQPDYQVADKVGVQFVSIEDIFMQSHVIIVLLPFSPELENFISH
                     KYLSMMRNGALIINAARGKLLDEGALLQVIEERNVFAALDVFSSEPLAQFSPLLHAKN
                     IITTPHIAAATVESYQQTGTHVAQSIIDYFAGREIKNVL"
     gene            complement(1245..1321)
                     /locus_tag="JNZ89_004535"
     tRNA            complement(1245..1321)
                     /locus_tag="JNZ89_004535"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1285..1287),aa:Met,seq:cat)
BASE COUNT          359 a          273 c          325 g          390 t
ORIGIN      
        1 ggtttagcac cgtcatgctc gtctactgtt gttctggttg ttggtgatgc ggtggcgctt
       61 gcactctctg aattgaaaaa atttactcgt gctgatttcg gcttatatca tccaggaggt
      121 gcactcggca ttaaagcaaa ttcataattt caaagtataa atacagtgac cggtcacgcc
      181 atcttttggg gtggcgttca ttgaagtgag tgtcagctat gaaaaatgtt ctggtcaccg
      241 tccccagctt ttcagcacgc tgtgtttccg ccagcaagtt gctaagagag aataatttta
      301 atcttattat taagaataat gtggagcatc tgcttaaatc agaatccact gcattacgag
      361 aatctatttg cgcggtcatc gccggaaaag attgttatca ggcggacacg ctatcattgc
      421 tgcctggtgt gaaaataata tcgagattcg ggacggggat agataatatt gatcttcgtg
      481 cagcacaaca atccggtatt gtagtcaata atgcggttgg gattaattca aatgctgtcg
      541 cggaatttat cattggactt atcttcgcga gcatgagaaa tattcccggc agctatcatg
      601 cgatgcaaaa tggctactgg ggtgagtcgc atggctatga attacaaggc aaacggattg
      661 gcatggttgg ctacggcaat ataggtaaaa ccctggcaaa aaggttatcc ggttttgatg
      721 ttgagctttt agcttatgac aaacaacccg attatcaggt tgctgacaaa gttggagttc
      781 agtttgtatc aattgaagat atctttatgc agtcgcatgt catcattgtt cttttgcctt
      841 tttctcctga gctggagaac ttcattagtc ataaatattt gtcgatgatg cgcaatggtg
      901 ctctaatcat caatgccgca aggggaaagt tgctggatga gggcgcttta ctacaggtga
      961 ttgaagaacg aaatgtgttt gcggcgctgg atgtgtttag ctctgaaccg ttggcgcaat
     1021 ttagcccact gctacatgcc aaaaatatca ttacaacgcc gcatattgcg gccgccaccg
     1081 ttgagtcata ccagcaaacc ggtacacacg ttgcccagtc gataattgat tacttcgcag
     1141 gaagggagat aaaaaacgtg ttgtgagttc agcgaacgaa gtttttaaat acaaaaaaac
     1201 cgcaatttgt ggaacacatt gcggtttatc agcattctaa gtattggttg cgggggccgg
     1261 atttgaaccg acgaccttcg ggttatgagc ccgacgagct accaggctgc tccaccccgc
     1321 gtcaccgtac tgctttattt catcaaa
//
LOCUS       DADMIB010000349         1345 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.360, whole genome shotgun sequence.
ACCESSION   DADMIB010000349 DADMIB010000000
VERSION     DADMIB010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.360"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..315)
                     /locus_tag="JNZ89_004536"
     CDS             complement(<1..315)
                     /locus_tag="JNZ89_004536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY8938154.1"
                     /translation="MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEK
                     LMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSD
                     TNP"
     gene            complement(327..1160)
                     /locus_tag="JNZ89_004537"
     CDS             complement(327..1160)
                     /locus_tag="JNZ89_004537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001359919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8938155.1"
                     /translation="MDPVYTPARKIHLYHCDHRGLPLALISTEGATAWCAEYDEWSNL
                     LSDENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY
                     PLNPVINVDPQGLVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMT
                     AKDLAYLIKFDGNYKDGMTVWLFSCNTSKGQNSFASQLAKELHTNVIGPDTLWTWWGR
                     GTNGKLKMDTVLTAPTNLNSNKDLMAITTKDLGNWITYGPSGHPISNMQGTPEKPSDI
                     R"
BASE COUNT          337 a          339 c          273 g          396 t
ORIGIN      
        1 tggatttgta tctgataaaa agaccccata attaaactgc gctgtaacat tcccctgaga
       61 tgctgatctt tccaagaatc gcaattgttt atcaatatta tttttagtaa agcagtaata
      121 ttgatatagt cgaaatgatg cctctgaatc accatgttgt gatttatact tcagtttcat
      181 cagcttttct tcacttaaat cataggtcat tgctgtagat cccatcacac tttcgttttc
      241 ttttattttc acatcagcac catgcaattg atcaataaga gaaaaataaa aaaatagtaa
      301 caagcatgct ttcatacatc tacaacctat cttatatcac tgggtttttc tggcgtacct
      361 tgcatattag aaatggggtg cccagatggc ccatatgtta tccaattacc aaggtctttt
      421 gttgttatag ccattagatc cttatttgaa ttaaggttcg ttggtgctgt tagcactgta
      481 tccattttta acttaccatt agttcctcgc ccccaccacg tccatagcgt gtcaggtcct
      541 attacatttg tatgtaactc tttagctaat tggctagcaa atgaattttg tcctttactt
      601 gtattacaag aaaataacca aactgtcatc ccatctttat aattcccatc aaatttaatt
      661 agatatgcta gatctttagc tgtcatgata ctgcgcgttg cggattcaat agatgtgggg
      721 gtaccatgcc ccccgattgt gaaaacgcct gggatattaa tctcatcagc tacagaatgg
      781 ataagatcac tttcggggta taaatttata tcaaccaaac cttgcggatc tacatttatg
      841 accggattca acggatactg ataaaaattc catcccccct tcagcccaat cggatcctga
      901 gtgatatacc gcccctgcag cgggtcataa tagcggtggc ggttgtaata caggccggac
      961 tcctcatcat actgctgacc cggcaggcga atgagctgct gcagatgatg cgggttctca
     1021 tcactcagca ggttgctcca ttcatcatat tctgcgcacc acgctgttgc cccttccgtg
     1081 ctgatgagcg ccagcggcag gccgcgatgg tcgcagtggt acaggtggat ttttcgcgcc
     1141 ggcgtgtaca ccgggtccat ctggctttgc atctgcgcca ccgtcaggcc gcacgatgcc
     1201 agccagcggc ggctttcctc actcacccgg tcagccagga tttcactttc cagccggtcg
     1261 agcatctgca ccagcaccgg cgggaacacc acactgccac cgtcttcgcc gccggactgc
     1321 tgaagggtat ccgccaggct gcggc
//
LOCUS       DADMIB010000350         1343 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.361, whole genome shotgun sequence.
ACCESSION   DADMIB010000350 DADMIB010000000
VERSION     DADMIB010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.361"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            86..1005
                     /locus_tag="JNZ89_004538"
                     /pseudo
     CDS             86..1005
                     /locus_tag="JNZ89_004538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415843.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            1005..1343
                     /locus_tag="JNZ89_004539"
                     /pseudo
     CDS             1005..1343
                     /locus_tag="JNZ89_004539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562879.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
BASE COUNT          380 a          300 c          326 g          337 t
ORIGIN      
        1 tttagggtct aatcaactta atgatcaata tctatagtga tattaccaac cgttaaaacg
       61 aaccgacaac tccatgagga acggaatgat gaataataaa gtcagcttca ctaacagcaa
      121 taatccaacc atctctttgt ctgcagtgat ctatttccct ccaaaatttg atgaaacccg
      181 tcagtatcag gcaattgtgg tatctcaccc aggtggggcg ttaaagaaca aacggccgga
      241 acctatgcca aaaaactggc ggaaaaggga tttgtcacta ttgcttatga cgcatcttat
      301 caaggtgaaa gtggcggcga gccgcgtcag ttagaaaacc catacattcg tactgaagac
      361 atcagtgccg tgattgatta cctgacaacg ctttcttatg tcgacaatac ccgaattggt
      421 gcgatgggaa tttgtgccgg tgcaggatat acagccaatg ctgcaattca ggatcgccgc
      481 atcaaggcca tcggtaccgt tagtgcggtc aatattggtt cgatgttccg taatggttgg
      541 gaaaacaatg tgaaatctat tgatgccctg ccatacgttg aagcgggttc aaacgcccga
      601 accagcgata ttagcagcgg agaatatgcc gttatgccac tggcaccaat gaaggagtcc
      661 gatgcgccga acgaagaact gcgtcaggcc tgggagtatt accacacccc tcgcgcgcag
      721 tatccaacag caccgggtta cgctactttg cgcagcctta accagattat tacctttgat
      781 gcttaccata tggcggaagt gtacctgact cagccgatgc agattgtggc gggcagccag
      841 gcagggagca aatggatgag tgacgatctg tacgatcgag catcaagcca agataaacgc
      901 tatcacattg ttgaaggcgc aaaccatatg gatctttatg acggcaaagc ctatgtggct
      961 gaagcaattt cagtattagc tccgttcttt gaggaaactc tgtaatgaaa catattcaaa
     1021 tccgcaatag tgatatggcc tggcatattg ctgccaatat tcagtttcca ccaaattttg
     1081 atgagtcaaa acagtatccg gcgattatca gcgtccatcc ttttggcagt tgtaaggagc
     1141 agacgtctgg caatatctat ggcaaagcat tggctgaaaa aggctatctc gttctcgctt
     1201 atgacgccag tttctaggga gaatctggtg gggagcctcg ctggatagaa gatccgacac
     1261 agcgcgtaga ggatattagc cgtgttatcg attatgcagt aactctgcca tatgttaatg
     1321 ctgaacgtat tggcgtgctg gga
//
LOCUS       DADMIB010000351         1333 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.362, whole genome shotgun sequence.
ACCESSION   DADMIB010000351 DADMIB010000000
VERSION     DADMIB010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.362"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..173)
                     /locus_tag="JNZ89_004540"
     CDS             complement(<1..173)
                     /locus_tag="JNZ89_004540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000460887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938156.1"
                     /translation="MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLN
                     PAQPHLLTAPEIWL"
     gene            complement(206..427)
                     /locus_tag="JNZ89_004541"
     CDS             complement(206..427)
                     /locus_tag="JNZ89_004541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HAY8938157.1"
                     /translation="MRPNISITLTTPHVTIERYSELTGLSIDTINDMLADGRLIRHRL
                     RKDKKREKVMINIAAMTVDALSECNLNLN"
     gene            553..1122
                     /locus_tag="JNZ89_004542"
     CDS             553..1122
                     /locus_tag="JNZ89_004542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001047316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage repressor protein"
                     /protein_id="HAY8938158.1"
                     /translation="MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRD
                     SFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALREDGFYIFD
                     KGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFV
                     EGGNRAFECKIEDIEIIGKIISLTVKYVR"
     gene            1138..1329
                     /locus_tag="JNZ89_004543"
     CDS             1138..1329
                     /locus_tag="JNZ89_004543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938159.1"
                     /translation="MLGKVFFVVLSCSLLLSPLTTYAKNYPCSGKKGGVSHCTSDGKF
                     VCNDGTISKSKKICTKNSR"
BASE COUNT          397 a          241 c          299 g          396 t
ORIGIN      
        1 agccagattt ctggtgcggt taataaatga ggctgagctg ggttcagctt gttccgcaga
       61 atctgcacat tcatgcctgc acgttctgcc agttgcacca gattgtggcg cagtgcaaat
      121 gcacgacagg cttcatcaaa atgtggatgt ttggaaactt ggtaatcaaa catggtcaat
      181 gcctctgatg tatttcagaa tcgaactaat taaggtttag attgcattct gaaagcgcat
      241 caacggtcat tgctgctatg ttgatcatca ctttttcgcg ttttttatct ttgcgcagac
      301 ggtgacggat aaggcgtcca tcagccaaca tgtcattgat ggtatcgatg gatagccctg
      361 tcagctcgct atagcgttca atagtcacat gaggcgtggt aagagtgatt gaaatgttag
      421 gtctcatgat gcaacattcc tcgtttaatg atgattaatc aggacgaata cggatcgttt
      481 gtattttgtg aacaccataa acatacgatt gcacagtgaa atcgtcaaga taaaagttca
      541 cttggagtga ccatgaattt ggagaaaggc ggacgaggcg ccatagagcg catggtagaa
      601 gcttatggat tcaagactcg acaggcgttg tgcgatcatt taggaatctc taaaagtaca
      661 ctcgccacac gctacatgcg tgactcattc ccagcagaat gggtaatcca gtgcgccctt
      721 gaaacgggca cctcgcttaa ttggctcaca accggacatg gttcaaagca aacttcaggt
      781 aatacaaata ctatggaagt tgctaaatat gtattatctg atggtgcctt gcgtgaagac
      841 ggtttttata tttttgataa gggatttcta ccctctacgt ttaaaaaacc ttttgtcatc
      901 acagataaca attctgaatt tatttgtgat aaagaatttg atgacatacg tgatggtaaa
      961 tgggtaataa gtattgatgg cgaagtaacg atccgtgaca ttactcgttt acccggtgga
     1021 agaatcttcg tcgagggtgg aaacagagcc ttcgaatgta agatagaaga cattgaaata
     1081 attggtaaaa ttataagttt aacagttaaa tatgttagat aataccggga ggaaactatg
     1141 cttggtaaag tattttttgt ggttttatca tgctctttgt tattaagccc actaactacc
     1201 tatgctaaaa attatccttg ttctgggaaa aagggaggtg tctctcactg tacctccgat
     1261 ggaaaatttg tttgcaatga tggaactatt agtaaatcca aaaaaatctg tactaaaaac
     1321 tcacgataac ttt
//
LOCUS       DADMIB010000352         1326 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.363, whole genome shotgun sequence.
ACCESSION   DADMIB010000352 DADMIB010000000
VERSION     DADMIB010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1326
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.363"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>1326)
                     /locus_tag="JNZ89_004544"
     CDS             complement(<1..>1326)
                     /locus_tag="JNZ89_004544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase"
                     /protein_id="HAY8938160.1"
                     /translation="GSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDV
                     IIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATMEEICRLTSPETCVAAIGQAGE
                     NLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTE
                     LIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGF
                     RTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVH
                     TTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKCVL
                     PAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGY
                     AKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLP"
BASE COUNT          343 a          363 c          283 g          337 t
ORIGIN      
        1 aatggcaagc cggaaccaat aaagttgata tgggtatgtg tcatgcagtc acggttgaac
       61 atacagttaa caatggaacc gacctgcgct gacgcttcat tggcatggtg aaccggatag
      121 ccaaacggcg accagagttt atttttcgcg tagccccagt actcttcacc caaattccag
      181 cgttctgcga tggcatatga accatcagcc aggtgactca gctcacccac acgatgcgcc
      241 agacggtagt aaaaatcttt aatgaaatta acgtcacccg cttccagttg atcccagtga
      301 atttccgcat actcttcagc aggcagaaca cacttgaaca cccctttgct gtaacaataa
      361 gtaaagtcgc gatgcaactg cccgtagtta caccataggc cgtagtcatc gaacaaattc
      421 agaccaacca agttaccaat cacacggcca tcgtctttat cttcaaaatc tttcggaccg
      481 ttcgggaaga tggtggtatg gacaaagttg gctacacaag tgttaccacc tgtgctgggc
      541 acgccaaact ctttcacccg aggaatattc atttgggtca tacaacggat cgggcaagag
      601 tggcagccac tcatttttac tgtgtatttc tctgccgccg gacctaagtc aaaaacggat
      661 ttataggtac gaaagccgac cgtgttctga ttgcctggcg gaatttcccc cgtttcaatc
      721 ggaccacctt cagccgcgcc ccaaaacagc cctttacgtg ctgtccaacg tgacttggga
      781 tctgaatact ctgcccacga ttgcggcgta cttggcacga catggttgtt attcgcacca
      841 ataagttcag tcatcatgta atcgttgaga cgcttcatct cctgacgatc ggcaatgttg
      901 acccctttcg tcccttcaac cgcaatcgct ttcaggtttt tcgaacccat aattgcgcca
      961 gttcccgcac cgccgctgtg gttacggcta ttcaacatgc cagagagagg aacaaggttt
     1021 tccccagcct ggccaatagc cgccacacag gtttccggac tggtcaatcg acaaatttct
     1081 tccatcgttg cgcgcgtccc ttttccccat aagaaatcgg ctttttccag gctaactttg
     1141 tcatctttaa tcttcagcca taccggtgat ttcgccttcc cttcgataat aatgacgtcg
     1201 tatccagcga atttcatttg cgctgcaaaa aagccaccca tatgggcatc gacaactaaa
     1261 tttcctttgg taaaagtaga aagtgaggtg atatttacgc gagaactaca gggggcacca
     1321 gatcca
//
LOCUS       DADMIB010000353         1315 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.364, whole genome shotgun sequence.
ACCESSION   DADMIB010000353 DADMIB010000000
VERSION     DADMIB010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.364"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..744
                     /locus_tag="JNZ89_004545"
     CDS             <1..744
                     /locus_tag="JNZ89_004545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS element protein"
                     /protein_id="HAY8938161.1"
                     /translation="YTPARKIHLYNCDHRGLPLALISTEGATEWCAEYDEWGNLLNEE
                     NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNP
                     ISEIDPQGLNPLILGVVALMSCGLFSSGGVIQSGQQRREQYGRKVNPEADKLTDEHKS
                     GVNPGGNCSPQNLSDLQNEKNRLCNQSRACAPQMLRKEILRRYEINLACASVRKQINN
                     QCFGGGDKAHMEEENKAYKTAADCSGLIK"
     gene            741..1244
                     /locus_tag="JNZ89_004546"
     CDS             741..1244
                     /locus_tag="JNZ89_004546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000720080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938162.1"
                     /translation="MKKIIFSNESAVYDELMIHFPCQPLPHISNDIIGLNELDIVYNF
                     FQKKQWNEIANNLKIKDDSYALELGITFLPEKVFCYYIPLYIYVSLFNKNDFWVFESD
                     FIQQYLCPEYRDYDDFLNFVFNFSDIQLSIIAQFMSYESDAGFFYASKACMDFWEDYS
                     PLLHKKI"
BASE COUNT          417 a          228 c          291 g          379 t
ORIGIN      
        1 tacacgccgg cgcgaaaaat ccacctgtac aactgcgacc atcgcggcct gccgctggcg
       61 cttatcagca cggaaggggc aacagaatgg tgcgcagaat acgatgagtg gggcaacctg
      121 ctgaatgaag agaacccgca ccagctgcag cagcttatcc gtttgccggg gcagcagtat
      181 gatgaggagt ccggcctgta ttacaaccgc caccgctatt atgacccgct gcaggggcga
      241 tatatcactc aggacccaat tgggctgaag gggggatgga atttttatca gtatccgttg
      301 aatccgatct cagagataga cccacaaggg ttaaatccgt taattcttgg tgttgtagca
      361 ctgatgagtt gcggtttgtt ttcatcaggt ggtgttatcc aaagtgggca acaacgcaga
      421 gagcaatatg gacgtaaagt taatccagaa gccgacaaat taacagatga acataagtca
      481 ggtgtaaatc ctggaggtaa ctgtagtccc cagaacctga gtgacttaca aaatgaaaaa
      541 aacagattat gtaaccagtc tagagcttgc gctcctcaga tgctgagaaa agaaatattg
      601 agacggtacg agataaattt ggcgtgcgct tcggtcagaa agcagattaa taatcagtgc
      661 tttggtggtg gagataaggc ccatatggaa gaagagaata aagcatataa aacagcagct
      721 gattgcagtg gcttaataaa atgaaaaaaa taattttctc taacgagagt gcagtctatg
      781 atgaacttat gattcatttc ccatgccagc cattacctca tatttcaaat gatattatag
      841 ggctgaatga actggatatt gtatataatt ttttccaaaa gaaacaatgg aatgaaatag
      901 ccaataattt aaaaataaag gatgactctt atgctttaga gttaggaatt acattcctcc
      961 ctgagaaagt attctgctat tacatccctc tgtatattta tgtctcgttg tttaataaga
     1021 atgatttttg ggtttttgaa tccgatttta ttcaacaata tttatgtcct gagtatcggg
     1081 attacgatga ttttttgaat tttgttttta atttttcaga tatacaacta tctattattg
     1141 cacagtttat gtcttatgaa tcagacgctg gattctttta tgcaagtaaa gcttgtatgg
     1201 atttttggga agattattca cctctattac ataagaaaat ttaatcgtaa aaggtataaa
     1261 tggtttaata aaaaacttgt ctactcgttg gagtagatga aaaataagat gacgt
//
LOCUS       DADMIB010000354         1291 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.365, whole genome shotgun sequence.
ACCESSION   DADMIB010000354 DADMIB010000000
VERSION     DADMIB010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1291
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.365"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..909
                     /gene="pocR"
                     /locus_tag="JNZ89_004547"
     CDS             <1..909
                     /gene="pocR"
                     /locus_tag="JNZ89_004547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein PocR"
                     /protein_id="HAY8938163.1"
                     /translation="SAATLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPF
                     CQMMRQHPQLSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVL
                     CGQVRLRNDYVDLVDILNVDDCWQADPELLNEFRKVPEMDYSRVMASADLLKLIVENC
                     LKKQLNFVVIKENKSQSDSVRQTRAPSPHDNKMKKALRYIDAHLSDDLRLEDVASHVY
                     LSPYYFSKLFKKYHGIGFNAWVNQQRMASARELLCHSDWSIASIARNLGFSQTSYFCK
                     VFRQTYQVTPQVYRQQVSENAAMETV"
     regulatory      986..1161
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
BASE COUNT          348 a          276 c          321 g          346 t
ORIGIN      
        1 tctgcggcga cacttaattc agaactcatt aataaaatcg cgcaggattt tgcgcaggcg
       61 accagccttg cggttgtcgt ggtcaatatt cacggcgatg aaatttccga gctgtttaac
      121 ttcactccat tttgtcagat gatgcggcaa caccctcagc taagcactcg atgtcgcatg
      181 agcgatcgtt gtgggggcct ggaagcctct aaatccgatc agccttgtat ttatcgctgt
      241 catgccggat taaccgattt ctctattcca ctggtaatcg ccgggcattt agtcggtttt
      301 gtattgtgcg ggcaagttcg tctgcgtaat gattatgtcg atttggtcga tattctgaat
      361 gtcgatgatt gctggcaggc agatcccgaa ttacttaatg aatttcgcaa agttcctgag
      421 atggattact caagagttat ggcctctgct gatttgttga agttgattgt agaaaattgc
      481 ctcaaaaaac aactcaattt tgtggttatt aaagagaaca aatctcagtc agattcggtg
      541 cgccagactc gtgcgcctag tccccacgac aataaaatga aaaaagcttt acgctatatt
      601 gatgcgcatt tatcagacga tttgcgtctg gaagatgtcg cctcgcacgt ttatctaagc
      661 ccttattatt tcagtaagtt attcaagaaa taccatggaa tcgggtttaa tgcgtgggta
      721 aaccaacaac ggatggccag cgcgcgtgag ttactgtgcc atagtgactg gagcatcgcc
      781 agcattgcgc gtaatttagg tttttcgcaa accagttatt tttgcaaagt tttccgtcag
      841 acttatcagg ttacgccgca ggtgtatcga cagcaagtga gtgaaaatgc ggcgatggaa
      901 acggtataaa aaaagggaag gtttaaataa acgctggaat gaataattaa cgttatttac
      961 gtgttatggg aaaagtaaaa tcagctcata acatacgctg acaggtgtgg cacatttgtg
     1021 cctgggaaga gagtgaaaat ccctcgcagc ccccgctgct gtaatgctga caaacccgaa
     1081 aatgccactg atcgcgagat tgggaaggtc gggagaggat gacgctaagc cagaagacca
     1141 gccagtcagt caataccaac aacttcggtg ggaagtgggt tgcccggaag cgtccggtag
     1201 agtacaggcg cgtctttata cccctaccac cctgaaagga tcagggtatg gcggcatcat
     1261 ttagttcttt catcgcagtg ccgacaggca c
//
LOCUS       DADMIB010000355         1285 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.366, whole genome shotgun sequence.
ACCESSION   DADMIB010000355 DADMIB010000000
VERSION     DADMIB010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.366"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            368..1156
                     /gene="virF"
                     /locus_tag="JNZ89_004548"
     CDS             368..1156
                     /gene="virF"
                     /locus_tag="JNZ89_004548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858179.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family invasion system transcriptional
                     regulator VirF"
                     /protein_id="HAY8938164.1"
                     /translation="MMDMGHKNKIDIKVRLHNYIILYAKRCSMTVSSGNETLTIDEGQ
                     IAFIERNIQINVSIKKSDSINPFEIISLDRNLLLSIIRIMEPIYSFQHSYSEEKRGLN
                     KKIFLLSEEEVSIDLFKSIKEMPFGKRKIYSLACLLSAVSDEEALYTSISIASSLSFS
                     DQIRKIVEKNIEKRWRLSDISNNLNLSEIAVRKRLESEKLTFQQILLDIRMHHAAKLL
                     LNSQSYINDVSRLIGISSPSYFIRKFNEYYGITPKKFYLYHKKF"
     gene            complement(1098..>1285)
                     /locus_tag="JNZ89_004549"
     CDS             complement(1098..>1285)
                     /locus_tag="JNZ89_004549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001409096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY8938165.1"
                     /translation="APQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAFK
                     IFYDISKISLELYHNIH"
BASE COUNT          442 a          202 c          222 g          419 t
ORIGIN      
        1 aatatcaaca ccaaccggat ttgtggagcc tccagtctga aggggcttta tgcgttccgt
       61 ataggatatt atgatgctgg agttttgcga agctccactc ctttccgaac atttacacag
      121 atattgccta agaaaagtga aaccataata tggttatagt ccctttcagt gcaaatactt
      181 agcttgttgc acagagaaat agaagctgca taagctcttt cttcaaaaaa tgtaaataaa
      241 gttaaatata ggaaaaatta cttaatctat cttaataacg gaaagatttt gtatacaatc
      301 actgttacag aaatttctta gttactctgt aaacactaaa tatagtttgg tatattctgt
      361 tgaatttatg atggatatgg gacataaaaa caaaatagat ataaaggttc gcttgcataa
      421 ctatattatt ttatatgcaa aaaggtgttc aatgacggtt agctcaggca atgaaacttt
      481 gactatcgat gaagggcaaa ttgcttttat agagcgaaat atacaaataa acgtctccat
      541 aaaaaaatct gatagcatta atccatttga gattataagc cttgacagaa atttattatt
      601 aagcattatt agaataatgg aaccaattta ttcatttcaa cactcctatt ctgaggagaa
      661 aagggggtta aacaaaaaaa tattcctcct ctctgaggag gaggtttcta tcgatttgtt
      721 caaatctata aaagagatgc cttttggcaa aagaaagatc tatagtttag cttgcctttt
      781 atcagctgtt tctgatgagg aagctttata tacttcgata tcgatagctt cttctcttag
      841 tttttctgat cagataagga agattgttga aaaaaacatc gagaagagat ggcgtctttc
      901 tgatatttca aataacttga atttatcaga aatagctgtt agaaaacgat tggagagtga
      961 aaaattaaca tttcaacaaa tccttcttga tattcgcatg catcatgcag caaagctttt
     1021 attgaatagt caaagctata ttaatgatgt atcaagactt atcggaatat caagcccatc
     1081 ttattttata aggaaattta atgaatatta tggtataact ccaaagaaat tttacttata
     1141 tcataaaaaa ttttaaatgc ttcatagccc atcgctattg ccagatgggt tttccccaca
     1201 cctgatggcc ctagtaatac gatattttca ttacgttcta tgaagctgag tgagcgtaac
     1261 gactggagtt gcttctgcgg tgctc
//
LOCUS       DADMIB010000356         1281 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.367, whole genome shotgun sequence.
ACCESSION   DADMIB010000356 DADMIB010000000
VERSION     DADMIB010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1281
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.367"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(124..453)
                     /locus_tag="JNZ89_004550"
     CDS             complement(124..453)
                     /locus_tag="JNZ89_004550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310836.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HAY8938166.1"
                     /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLL
                     LDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGE
                     MKNGEAK"
     gene            complement(625..>1281)
                     /locus_tag="JNZ89_004551"
     CDS             complement(625..>1281)
                     /locus_tag="JNZ89_004551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HAY8938167.1"
                     /translation="TGEIDTALWRSGDVLLGSLLAMLFTGIWPQRAFIHWRIQLAKSL
                     TEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQT
                     INRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPV
                     FANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK
                     "
BASE COUNT          314 a          302 c          300 g          365 t
ORIGIN      
        1 atacagaaga tgtctgtcgc taatttcggt aagttatcag atgggaatga tgacggtgat
       61 acacagaaaa gaatcaatga gcaatgaggg ttgccaggca accctcattg aataaaacag
      121 gaattacttc gcttcgccgt ttttcatttc gcccatagct ttcagctttt tggagatatc
      181 gcggcgttct ttggagagct cggcattttt gatgatgtaa tcgtcaacgc gatcttcata
      241 gtcacctttc atgctggcga tgatgccctg gattgcttca acgctcatcc ccggcttgat
      301 gtaatcgctc aggttgtcca gcagcaggac gcgcttctgg ttgtcacgga tctttttctc
      361 aacgtcctga atttcacgtt gcagtttgtt cttacgacgg aacagacgaa caaattccag
      421 tacgtcctgg aatgaaggct tggtagtttc catttttata cccctgataa tgtgagagtc
      481 ggattcgttt aagcaaccgc tatccgttag agccaacatt actcatagct gccgcagatg
      541 acaatgcttt tatccctttt cactatcata ccctttatcc ttgctgaatc gaagcagcag
      601 caagatgatt ctgtagttca ggaattattt gcgcaaggcc cggcaaatca gattcgatag
      661 caactcaagc tgatgtgccg tttccatgtt cagccacaca taaccataga ttggtgtttc
      721 cacaaccttc aggtcatggt ggttattgag caactgacgc agctcttcca ctgcatcgtt
      781 caatttttcc gtattggcaa aaaccggctg cggattacct tcgtacaacg catgaacaag
      841 gctcagcagt atttgctgca tcatgtgctg ggtatcacga agtttttgcg cgttcaataa
      901 cacgaaatgg ctggggcgcg tggcccagta cgcattgatt tgcaactcca gcatacaaac
      961 cagattgcgg ttaatggtct ggataccttc atatatcgat tttggaatac gggtttcttt
     1021 gctggcgggc gcaatcagcc cacgcatttt cacggcatcg gtcaggagtt tttgtagatg
     1081 gctttccaga cgtgggcgtt cgagtaagtt cggtgagaat gcagattgat agacccgatt
     1141 atactcggtc agacttttcg ccagttgaat gcgccagtgg atgaacgccc gttgtggcca
     1201 gataccggta aacaacattg ccagtaaaga gccgaggagc acatcgccgc ttcgccataa
     1261 cgccgtatca atttcacctg t
//
LOCUS       DADMIB010000357         1274 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.368, whole genome shotgun sequence.
ACCESSION   DADMIB010000357 DADMIB010000000
VERSION     DADMIB010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.368"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(57..896)
                     /locus_tag="JNZ89_004552"
     CDS             complement(57..896)
                     /locus_tag="JNZ89_004552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY8938168.1"
                     /translation="MLNVAIENQNGWNYSAPAPHKTGAGISTPKVTRAHNRAEAVFLC
                     VMHSHIQIMVRRAGQPQGWPGSRVTGSANPVRLTTHEISTSAGELINLSLEDVIMATT
                     LSHPDVTIENGRAVTTSISIAEFFGKQHHHVVQKIESFECSELFLTSNFSRVKFEHRG
                     NSYNAYQITKNGFVFLVMGFTGKKAATFKEAYIAEFDRMEAELRQNNTPPADKMIPGD
                     GRTLVVHFDKFGNVEFTETVPDGALVCTLETFRFYLEKQGWTLVNRGAIKNMTVEQLL
                     SLK"
BASE COUNT          330 a          313 c          296 g          335 t
ORIGIN      
        1 tgagggcagg tgtaaaacaa taatcaagca tggggttcat atccatagct ccatttttat
       61 tttaaggaaa gcaactgctc tacggtcatg tttttaattg cgccccggtt tacaagagtc
      121 cagccctgtt tttccagata aaaccggaaa gtctccaggg tacagaccag tgcgccatca
      181 ggaacggttt cggtgaattc gacattgccg aatttgtcga agtgaacaac cagagtgcga
      241 ccatcacccg gaatcatctt gtcagcaggt ggggtgttat tctggcgcag ttcggcctcc
      301 atgcggtcga actcagcaat gtaggcttcc ttgaatgtgg cggctttttt gcccgtgaag
      361 cccatcacca ggaaaacgaa gccgtttttg gtgatttggt aggcgttata agaattgccg
      421 cggtgttcga atttaacccg cgaaaagttg ctggttaaaa atagttcaga acattcgaag
      481 gattctattt tttgaacaac atggtgatgc tgcttgccaa aaaactcagc aatcgaaata
      541 gaagtagtga cggcgcgacc attttcgatg gttacgtcag ggtgagaaag ggtagtagcc
      601 ataatgacat cctcaagtga taagttaatt aactcaccag cagaggtgct aatctcatgg
      661 gtggtgagac gcacagggtt agcactaccg gtcactcgag aacccggcca gccttgcggc
      721 tgccccgcac gcctcaccat aatttgaatg tggctgtgca ttacgcataa aaaaaccgct
      781 tcagcgcggt tatgcgctcg agtaactttc ggggtgctaa tcccggcacc cgttttatga
      841 ggtgcaggtg cactataatt ccacccgttc tggttttcaa tagctacatt caacattttc
      901 tctttccttt catcaccgaa gtgaattttg tgatgcggtg cctagtgcct ccaggtgacg
      961 ttaaccagtt aacaattaca gtcggctttc ccacccaaac caataaggac taacatgact
     1021 tttaactgtg ccgcgtgcgc ttagccgcat tcaccgcatc acaaaattca ctttaaaaag
     1081 ggcggacatc agccagcaat taaaccgatg ccgccaactg gtacttcaca cagcaatgtc
     1141 gttatttaca accggaagcg cactcccacc atttaaattt cacagacaag accgactctt
     1201 tatgaatacc ggaaatgcgc cttcgtgttg tgcccggttt tatttcacca cctccgggct
     1261 ttggtggcct cggc
//
LOCUS       DADMIB010000358         1234 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.369, whole genome shotgun sequence.
ACCESSION   DADMIB010000358 DADMIB010000000
VERSION     DADMIB010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.369"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..897
                     /gene="lpxM"
                     /locus_tag="JNZ89_004553"
                     /gene_synonym="msbB"
     CDS             <1..897
                     /gene="lpxM"
                     /locus_tag="JNZ89_004553"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY8938169.1"
                     /translation="LSPVYWSTWFLLGMIAGISMFPPSFRDPVLAKIGRWAGRLSKKA
                     RRRATINLSLCFPEKSDTEREIIVDKMFATALQSIVMMAELAIRGPEKFQKRVFWKGL
                     EILEEIRYNNRNVIFLVPHGWSVDIPAMLLAAQGEKMAAMFHQQRNPVIDYVWNSVRR
                     KFGGRLHSREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFADFFATYKATLPIIGRL
                     MNISQAMIIPLFPVYDEKKHFLTIEVRPPMDACIASADNKMIARQMNKTVEILVGSHP
                     EQYIWVLKLLKTRKSNEADPYP"
     gene            complement(1051..>1234)
                     /locus_tag="JNZ89_004554"
     CDS             complement(1051..>1234)
                     /locus_tag="JNZ89_004554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HAY8938170.1"
                     /translation="IYQPVYSPWVNHAERLWQALHDTITRNHQCRSMWQLLKKVRHFM
                     ETVSPFPGGKHGLAKV"
BASE COUNT          338 a          255 c          294 g          347 t
ORIGIN      
        1 ctttcccctg tttactggtc tacatggttc cttttgggaa tgattgcagg tatttcaatg
       61 tttccccctt cattcagaga tcctgtcttg gcaaaaatag ggcgttgggc gggcagattg
      121 agcaaaaaag ctcgtcgcag ggcgacgatt aatttatcgc tttgtttccc agaaaagagt
      181 gatacagaac gggaaataat tgtcgacaaa atgtttgcca cagcattgca atccatagtg
      241 atgatggcag aactggcaat tcgtggtccg gaaaagttcc agaaacgagt gttctggaaa
      301 ggcctcgaaa ttcttgagga aattcgatac aataacagaa atgtgatttt tctggttccc
      361 catggctgga gcgtggatat tcctgcaatg ttgctggcag ctcaggggga aaaaatggcc
      421 gccatgtttc atcagcaacg aaatccagtg attgattatg tctggaattc tgtacggcgt
      481 aaattcgggg ggcgcttaca ttcccgggag gatgggataa aaccatttat tcagtcagta
      541 cgccagggat actgggggta ttaccttcca gatcaggatc atggtcctga atacagtgaa
      601 tttgctgatt tttttgcgac ctataaagcg acattaccaa ttattggacg tctgatgaac
      661 atcagtcagg ctatgattat accgcttttc ccggtttatg atgaaaaaaa acatttcctg
      721 actattgaag ttcggccacc aatggatgca tgcattgcca gcgcggacaa taaaatgatt
      781 gcccgacaaa tgaacaaaac agtggaaatt ttggtggggt cacatccgga acagtatatc
      841 tgggttttaa aattgttaaa aacgcgcaaa tcaaacgaag cggacccgta cccttgaaat
      901 tataaagtac aggtatttcc actagttgtt tcttacaggt taccaatcga aacacatccc
      961 ccttccgtgt gttgcccgtt tggcacggag gactgtgtag atgcagttcg ttaaatttaa
     1021 tttatgccta aatagctgcg cttaataccg ctacactttt gccagtccat gtttgcctcc
     1081 ggggaatggg ctgacggttt ccataaaatg gcgaactttt ttcaacagtt gccacattga
     1141 gcggcactga tgattacgcg ttattgtgtc gtgaagtgcc tgccatagcc gttcagcatg
     1201 attcacccat ggcgagtaaa ccggctgata aatg
//
LOCUS       DADMIB010000359         1234 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.370, whole genome shotgun sequence.
ACCESSION   DADMIB010000359 DADMIB010000000
VERSION     DADMIB010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1234
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.370"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(280..567)
                     /locus_tag="JNZ89_004555"
     CDS             complement(280..567)
                     /locus_tag="JNZ89_004555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938171.1"
                     /translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE
                     LLEALLDQQKRQNALLRRLCEANEPEKADKKTIESQKSVDDEDIIRLVAER"
     gene            complement(642..785)
                     /gene="mgrB"
                     /locus_tag="JNZ89_004556"
     CDS             complement(642..785)
                     /gene="mgrB"
                     /locus_tag="JNZ89_004556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP/PhoQ regulator MgrB"
                     /protein_id="HAY8938172.1"
                     /translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF
                     IPW"
     gene            944..1183
                     /locus_tag="JNZ89_004557"
     CDS             944..1183
                     /locus_tag="JNZ89_004557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938173.1"
                     /translation="MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLT
                     ARGTSTVQYLHTKSGFLGITDCPLLRKSNIVVDNG"
BASE COUNT          404 a          258 c          240 g          332 t
ORIGIN      
        1 ttaaaataag aaaaattgat gaatgagcaa aaaaatcaag agagaaacgt ttcgctaata
       61 aataatacca cgcttaatca caaatccgat gtaaacatcc taataaatta atgaggaaaa
      121 tatctttttc tgatatcccg ttacgcaaat aaataatatg ataattattt gaagtcagac
      181 cagagtttta atttgaagca gttgcaccat gacagtgcgt ataatcagga tgaattgagt
      241 aacccttcaa cgacggggtt actcaagatt gaggaaggat tatcgttcgg cgaccaggcg
      301 aataatatct tcgtcatcaa ccgatttttg actctcaatg gtctttttat ctgctttctc
      361 tggttcgttt gcttcgcaca aacgacgtaa cagtgcattt tgacgttttt gctgatccag
      421 caacgcctca agcagttcaa tctgttcgtt agtccgtgaa ctggcacgat tgataaaaaa
      481 ccacaagatg agcccgataa gaagaactac caccgataca accaaagacg caatgttcat
      541 cacgcctgaa tttacaactt cgttcatttc accacctctg agtagaggcg ctattctacc
      601 actgctggag aggaagaaaa tctagtgctg aaaaaatgat atcaccacgg gataaactgg
      661 ttaatggcac aaattccgct gaaaaattgt acatcctgat cgcacatcat gttgaatacc
      721 tgcgcccaaa gcagcaagca agccaacacc acgacaacca gaacgaccca tcgaaacttt
      781 ttcactccaa tctccgcttc acctacctta tgtcattaaa ctagcatgcg ttagttaaac
      841 agcgcctaac tatgtcgata ttcgtgcttt ttcggaatga gtagcttgct tcagcgcata
      901 ttgccgctac gattaagcga acataaaaag agaagaggtt gtaatgcgat tcatcattcg
      961 cacagttatg ctgatagcac tggtatggat aggattatta ctcagcggat atggcgtttt
     1021 gattggaagc aaagagaatg ccgcaggatt aggtttgcaa tgtacctatc tgactgccag
     1081 aggcaccagc acggtacaat acttgcacac taaaagtggt ttcttgggga taacagattg
     1141 cccactgtta cgtaaaagca atatcgtggt cgataatggt taagggtaat aaataaccag
     1201 attctcactc atgagtaaaa tattcttata gcaa
//
LOCUS       DADMIB010000360         1233 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.371, whole genome shotgun sequence.
ACCESSION   DADMIB010000360 DADMIB010000000
VERSION     DADMIB010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.371"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(339..605)
                     /locus_tag="JNZ89_004558"
     CDS             complement(339..605)
                     /locus_tag="JNZ89_004558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938174.1"
                     /translation="MLTQTIFPCLPQKQENIILEVSNPVLLSSTVTTDGYTVFNKKAA
                     IYELQIPATNRTKTLKFTATEMQWLTKINEVGIVEKQSQRHSNI"
     gene            complement(787..1185)
                     /locus_tag="JNZ89_004559"
                     /pseudo
     CDS             complement(787..1185)
                     /locus_tag="JNZ89_004559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612066.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT          321 a          248 c          254 g          410 t
ORIGIN      
        1 aagccgtcta tgggaaggag tctgctgtta ttccagagaa tggtaattca gtcatatatt
       61 tctccatcta tgacttgtca ataccatcct gatatttgtg ggtcagcaat atattctact
      121 aaaaggtatt taaggtcatt gcgtccctgc actcgaataa tggtgaagaa agcatgatga
      181 atatatcacg ataacgttca gtatgtatcg aggatagatg gagttactcc tctctgaaat
      241 agaattactg ctctactttt tctgtttcca gaaattatta gtaacaaacc ctgatatatt
      301 cttttgaaaa tggagcttaa acgagtctga aattaacttc agatattaga atgccgttgg
      361 ctttgttttt caacaattcc tacttcattt atctttgtca accattgcat ttctgtagca
      421 gtgaatttca acgttttcgt ccggttggta gcaggtattt gtaattcgta tatagctgct
      481 tttttattga aaacagtata tccatctgta gtaacagtag aagataataa tacaggattt
      541 gacacttcaa ggatgatatt ttcttgtttt tgtggaaggc aagggaatat agtttgtgta
      601 agcatattgc ttccttatgt tatattttag taaagaattt attttttaca ttatagtcgg
      661 ctaaatgaag tttactgtaa aaaaacgata cttttttcgt aagcgatgag atgtggagcc
      721 agaaaaatgg ctgcgttacg tcattgaact gtccttgacc cacgatattc agacagtcgt
      781 tgtatcttaa gttgacatta cccgctgacg tcgatattcc cttggtgaga gataacccaa
      841 cgcactatgc ggatggtttt cattgtaatg ctcgatcgcc actgcaaggt tatgcaatgc
      901 cgttcttggt ttcggcatga acgcgatgca gtcttccttc atcgttttca cgaaccgttc
      961 tgctattcca ttactctgag ggctactgac tgccgtcgtg cagggctcca gattcaactc
     1021 tctggcgaac tgccgtgttt catgagccgt ataagccgaa ccgttatcgg ccactggatt
     1081 ggccgttccg gtcctttatc gccatatcgc tgacatgaca tcctgcaccg ttgctttgtc
     1141 ataatctccc gtgcctgctg cccagtctat ggcttcacga tcgcaatatg gaacgtaacg
     1201 ctgtcatcgg gagaatcgtc aatgcggcat tcg
//
LOCUS       DADMIB010000361         1227 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.372, whole genome shotgun sequence.
ACCESSION   DADMIB010000361 DADMIB010000000
VERSION     DADMIB010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1227)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1227)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.372"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..553)
                     /locus_tag="JNZ89_004560"
     CDS             complement(<1..553)
                     /locus_tag="JNZ89_004560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4158 domain-containing protein"
                     /protein_id="HAY8938175.1"
                     /translation="MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRG
                     PANRLGFAVQLCYLRFPGVILGVDELPFPPLLKLVADQLKVGVESWNEYGQREQTRRE
                     HLSELQTVFGFRPFTMSHYRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALN
                     AVERASAEAITRANRRIYDALAEP"
     gene            complement(556..1116)
                     /locus_tag="JNZ89_004561"
     CDS             complement(556..1116)
                     /locus_tag="JNZ89_004561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000147566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY8938176.1"
                     /translation="MTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQ
                     LEALISFARTGDTVVVHSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGEDSP
                     MANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEA
                     GEQKTKLAREFGISRETLYQYLRTDQ"
BASE COUNT          242 a          362 c          363 g          260 t
ORIGIN      
        1 gtggttcggc caaggcgtcg tagatgcgcc ggttagcacg ggtgatcgcc tcggcactcg
       61 cccgctcgac ggcgttgagg gcgggcagaa tgaccgactg ccgccgcagg tgcccgatca
      121 aggcgctggc cagcacgatg cctttgtcgg tttgcatcgc cagctcggtc agcatctgga
      181 cggcctgccg gtaatggctc atggtgaagg gccggaaacc gaacacggtt tgcagctcgc
      241 tcaggtgctc gcgccgggtc tgctcccgct ggccgtactc gttccagctt tcgacgccga
      301 ccttgagctg gtcggcgacc agcttcaaca agggcgggaa cggtagttca tcgacgccca
      361 ggatgacgcc gggaaagcgc aggtaacaga gctgcaccgc gaagcccagc cgattggctg
      421 gcccgcgccg ctgtcggatg atcgagaggt cggtatcgtt gaatgtgtaa tgtcggatca
      481 ggtcgtcctt ggagtccggc aacgccagca ggctttcccg ctcggcggcg gacaggatgg
      541 aacgacgtgg catatttact gatccgttct caagtattga tacagggttt cgcgactgat
      601 tccgaattca cgagcaagct tggtcttttg ctcgccagcc tcgacacgtt ggcgcagttc
      661 ggcaatacgc tcagacgaca gggatttctt cctgccacgg taagccccgc gttgcttggc
      721 gagcgcaata ccctcgcgct gacgctcgcg gatcagggcg cgctcgaact cggcgaacgc
      781 gcccatcacc gagagcatca ggttcgccat cggagagtct tcgccagtaa aactgaggtg
      841 ttccttgacg aattcgatat gcacgccgcg ttgtgtcagc gtttgcacga tccggcgcaa
      901 atcatcgaga ttgcgcgcca ggcgatccat gctatgcacc accacggtgt cgccggtgcg
      961 ggcgaagctt atcagcgctt ccagttgcgg acgcttgaca tccttgccgg atgccttgtc
     1021 gctaaaagcg cgatcaacct tgacgccttc cagttgccgt tccgggttct ggtcgaaggt
     1081 gctgaccctg atatacccaa tgcgctgtcc agtcatggaa ttccctgcaa aatgtcaggg
     1141 aagactctat gaccttcaac gagatatgtc aataaattca aaattcaatc ctatcctgac
     1201 gcaatttaca catggcatct gacatca
//
LOCUS       DADMIB010000362         1209 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.373, whole genome shotgun sequence.
ACCESSION   DADMIB010000362 DADMIB010000000
VERSION     DADMIB010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1209
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.373"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            63..1076
                     /gene="intI1"
                     /locus_tag="JNZ89_004562"
     CDS             63..1076
                     /gene="intI1"
                     /locus_tag="JNZ89_004562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 integron integrase IntI1"
                     /protein_id="HAY8938177.1"
                     /translation="MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVHWVRAF
                     IRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPWLQ
                     EIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
                     DHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALER
                     KYPRAGHSWPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATP
                     HTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLT
                     SER"
BASE COUNT          218 a          370 c          371 g          250 t
ORIGIN      
        1 gcgcttgctg cttggatgcc cgaggcatag actgtacccc aaaaaaacag tcataacaag
       61 ccatgaaaac cgccactgcg ccgttaccac cgctgcgttc ggtcaaggtt ctggaccagt
      121 tgcgtgagcg catacgctac ttgcattaca gcttacgaac cgaacaggct tatgtccact
      181 gggttcgtgc cttcatccgt ttccacggtg tgcgtcaccc ggcaaccttg ggcagcagcg
      241 aagtcgaggc atttctgtcc tggctggcga acgagcgcaa ggtttcggtc tccacgcatc
      301 gtcaggcatt ggcggccttg ctgttcttct acggcaaggt gctgtgcacg gatctgccct
      361 ggcttcagga gatcggaaga cctcggccgt cgcggcgctt gccggtggtg ctgaccccgg
      421 atgaagtggt tcgcatcctc ggttttctgg aaggcgagca tcgtttgttc gcccagcttc
      481 tgtatggaac gggcatgcgg atcagtgagg gtttgcaact gcgggtcaag gatctggatt
      541 tcgatcacgg cacgatcatc gtgcgggagg gcaagggctc caaggatcgg gccttgatgt
      601 tacccgagag cttggcaccc agcctgcgcg agcagctgtc gcgtgcacgg gcatggtggc
      661 tgaaggacca ggccgagggc cgcagcggcg ttgcgcttcc cgacgccctt gagcggaagt
      721 atccgcgcgc cgggcattcc tggccgtggt tctgggtttt tgcgcagcac acgcattcga
      781 ccgatccacg gagcggtgtc gtgcgtcgcc atcacatgta tgaccagacc tttcagcgcg
      841 ccttcaaacg tgccgtagaa caagcaggca tcacgaagcc cgccacaccg cacaccctcc
      901 gccactcgtt cgcgacggcc ttgctccgca gcggttacga cattcgaacc gtgcaggatc
      961 tgctcggcca ttccgacgtc tctacgacga tgatttacac gcatgtgctg aaagttggcg
     1021 gtgccggagt gcgctcaccg cttgatgcgc tgccgcccct cactagtgag aggtagggca
     1081 gcgcaagtca atcctggcgg attcactacc cctgcgcgaa ggccatcggt gccgcatcga
     1141 acggccggtt gcggaaagtc ctccctgcgt ccgctgatgg ccggcagcag cccgtcgttg
     1201 cctgatgga
//
LOCUS       DADMIB010000363         1199 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.374, whole genome shotgun sequence.
ACCESSION   DADMIB010000363 DADMIB010000000
VERSION     DADMIB010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.374"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..755)
                     /gene="ipaH4.5"
                     /locus_tag="JNZ89_004563"
     CDS             complement(<1..755)
                     /gene="ipaH4.5"
                     /locus_tag="JNZ89_004563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH4.5"
                     /protein_id="HAY8938178.1"
                     /translation="MKPINNHSFFRSLCGLSCISRLSVEEQCTRDYHRIWDDWAREGT
                     TTENRIQAVRLLKICLDTREPVLNLSLLKLRSLPPLPLHIRELNISNNELISLPENSP
                     LLTELHVNGNNLNILPTLPSQLIKLNISFNRNLSCLPSLPPYLQSLSARFNSLETLPE
                     LPSTLTILRIEGNRLTVLPELPHRLQELFVSGNRLQELPEFPQRLKYLKVGENQLRRL
                     SRLPQELLTLDVSNNLLTSLPENIITLPICTNV"
BASE COUNT          341 a          215 c          259 g          384 t
ORIGIN      
        1 ttaacattcg tacaaatggg caatgtgatt atattttcgg gtaatgaagt tagtaggtta
       61 ttggaaacat ccagtgtcaa tagttcttgc ggtaatctgg ataatctgcg tagttgattt
      121 tcacctacct tcaaatattt taagcgctga ggaaattctg gtagttcctg tagcctgttg
      181 ccggaaacaa agagttcttg tagtctatga ggcaattcag gcaagacagt aaggcgatta
      241 ccttcaatac gtaatattgt tagcgttgat ggaagctctg gtaacgtctc cagactatta
      301 aaacgtgccg agagtgattg taaatatggt ggtaatgatg gcagacatga caaatttcga
      361 ttgaatgaaa tattaagctt aatcagttga gatggaagtg tcgggagtat attcaagttg
      421 ttaccattta catgaagttc tgtcaaaagc ggagaatttt caggtaggga gattaactca
      481 ttgttggaaa tattaagttc acgtatatgc aaagggagtg gtggtaaaga acgtagtttc
      541 agtaagctta aattgagaac aggctcccgg gtatccagac atattttcaa taatcgaacc
      601 gcctggatgc gattttctgt tgttgttcct tccctagccc agtcatccca gatgcggtgg
      661 taatctctgg tacactgttc ttctaccgat aaacgagata tacatgataa gccacaaagg
      721 gaacgaaaaa aagaatgatt gttgatcggt ttcatttatt aacccctcac tattcatatc
      781 ttggtctatt aatgcaaata aaacgagaaa gtctttaaaa aaacaatcct agagctttat
      841 cggcgttttc attccagctg gaggaatatg ttcctgtctt tccagtaacc gtcgattgtt
      901 atatcagtct acccatgtta atgtgaccag ttctactttc atccagtttg gattgatctt
      961 tatcccctat attttcaaac aatttttatc atttaactca ttactgtctc gatattccca
     1021 tagcaaacga tctggttggt tagcccctca aaaaagtcag ttgcacgccg taaatccctg
     1081 ccggtattga gcgaggattt acgggttgtt gttaaggtcc gtaatcgggt cacagttttt
     1141 ccggagtcaa tccggtctgc ggtttatgct tatgcgacgt gattatgaat ggtgcagtc
//
LOCUS       DADMIB010000364         1193 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.375, whole genome shotgun sequence.
ACCESSION   DADMIB010000364 DADMIB010000000
VERSION     DADMIB010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.375"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..77)
                     /locus_tag="JNZ89_004564"
     CDS             complement(<1..77)
                     /locus_tag="JNZ89_004564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY8938179.1"
                     /translation="MSKVGINGFGRIGRLVLRRLLEVKS"
     gene            266..796
                     /gene="cybB"
                     /locus_tag="JNZ89_004565"
     CDS             266..796
                     /gene="cybB"
                     /locus_tag="JNZ89_004565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415935.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b561"
                     /protein_id="HAY8938180.1"
                     /translation="MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMI
                     HVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGL
                     VMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHY
                     FWKDNTLLRMMPRKRS"
     gene            1041..>1193
                     /locus_tag="JNZ89_004566"
     CDS             1041..>1193
                     /locus_tag="JNZ89_004566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938181.1"
                     /translation="MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCN
                     DGSISAS"
BASE COUNT          319 a          258 c          270 g          346 t
ORIGIN      
        1 ttgcttttga cttcaagtaa tcgacgcaac accagtcgac cgatacgacc aaaaccgtta
       61 ataccaacct tactcatggt tttctcctgt caggaacgtt cggatgaaaa ttgatccttt
      121 ccaggcttag cccaggattg tgggatgggc aatctccatt cttacagtga aacgtaacgt
      181 actgaaaacg ggtgaacaat atttaatgaa attttgagaa aagcccgtta tgttaacgga
      241 aaattatgtt aaagcaggaa atgttatgga aaataaatac tcaaggttac aaatcagcat
      301 tcactggctg gtctttttgc tggttatcgc agcgtattgc gcaatggagt ttcggggttt
      361 cttcccacgt agcgatcggc cactcatcaa catgattcat gtttcctgcg gcatctcaat
      421 tctcgtgctg atggtcgttc gtcttttgtt aaggctgaaa tacccaaccc cgccgattat
      481 acctaagcca aaaccgatga tgacgggact ggcgcatttg ggacatttgg tgatttatct
      541 cctgtttatt gcgctgccag tgattggttt ggtgatgatg tataaccggg gcaacccgtg
      601 gtttgcgttt ggtttgacga tgccttacgc ttcagaggcc aatttcgaac gggttgatag
      661 cttaaagtcg tggcatgaaa cgctggcgaa tctgggatat tttgtcatcg ggttgcacgc
      721 tgcggctgca ctggcacacc actatttctg gaaggacaac acacttctac gcatgatgcc
      781 gcgtaaacgt tcctgaagga tatttaaaga aaacgcctgt actaaaaccg acccgtggta
      841 caggcgaaga atacgggtct acatcggaag cgcctattat atttatttgt atgacaaata
      901 aaaccataat ccttgcccat acgtccatct ggcttatttt taatcaattc acccgatctt
      961 tgatctcatc aacggtatca aaataaacca gcgtataacg ttcaaatcga acataagatt
     1021 cgataaacca tggaggttat atgaaaaaac tggcacttat tttgtttatg ggaacgcttg
     1081 tttcctttta tgccgatgcc gggcgcaaac cctgttctgg ttcgaaaggg gggatctcac
     1141 actgtacggc aggcggcaaa tttgtctgta atgatggttc tattagtgcc tcg
//
LOCUS       DADMIB010000365         1166 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.376, whole genome shotgun sequence.
ACCESSION   DADMIB010000365 DADMIB010000000
VERSION     DADMIB010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1166)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.376"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..313)
                     /locus_tag="JNZ89_004567"
     CDS             complement(<1..313)
                     /locus_tag="JNZ89_004567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938182.1"
                     /translation="MADKAILWALISASTKEERKACSLSYFACKAAEAELGLAYMAAN
                     DNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNK
                     IK"
     gene            complement(681..800)
                     /locus_tag="JNZ89_004568"
     CDS             complement(681..800)
                     /locus_tag="JNZ89_004568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001371797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HAY8938183.1"
                     /translation="MLSCVSDIPCDDNFYDVLSIPVASGNNMQCKNNPRCTHL"
     gene            complement(1021..>1166)
                     /locus_tag="JNZ89_004569"
     CDS             complement(1021..>1166)
                     /locus_tag="JNZ89_004569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY8938184.1"
                     /translation="LSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNK
                     ENP"
BASE COUNT          338 a          240 c          197 g          391 t
ORIGIN      
        1 cttttatttt atttactgtt tcaatgcaat cagcggcaag ttggagtgga tttagatttt
       61 tcagatatgg tcttatgatc tttcccttac ttaataaata gcatgtatag gattcggaaa
      121 gtccagcatc tattttgtac ctcattatat tagataagga tgtgagaaat tccttgttat
      181 cattcgcagc catatatgcc agtccgagtt cagcctctgc ggccttacag gcaaaatagc
      241 ttagtgaaca cgcttttcgt tcctctttag tactggctga tattagtgcc cataatattg
      301 ctttgtctgc caaatctaac tctctctgaa attgtcttgc agtaactgca ctcgcagaaa
      361 tagagaaaaa aatacaattg ttaataacct tgccatattt ttttagtccg taactgttaa
      421 tgtgctatct ggctctgaaa atattaactc atttaatttt tgcatgtcat tagataaacc
      481 agttatacaa ccctcggaac agaatcgagg tcctaaagac ggaccaaaag cgtttaaaca
      541 actatgtatt gaaaatccat tgcgattata agttcctgta ttaactgacg gtactaatcg
      601 tatgccgtca ggttttctat tgcttgctcc cgggtcatta acattccaac tccataggcc
      661 ttgaggtatt ggccatctat ttataaatgt gtacaacggg gattattttt acattgcata
      721 ttattaccag aagcgactgg aatactaagc acatcataaa aattatcatc acatggtata
      781 tctgaaacac acgaaagcat acctaaagtt atgctgtata aacaggtggc taatcccaag
      841 gggatcgatt ccagaaatcg ggttcaacgg atactgataa aaattccacc taccttccag
      901 cccaatcgga gcctgagtgt tataccgccc ctgctgcggt taatgttacc gataatagtt
      961 atagtacagc cctgattcat catcatacta ctgctgcggc agtctgatga actattgctt
     1021 ttacggattc tccttattct tccttctatc cattcgcttt agctttttga gctcttgaag
     1081 tttgctcttt gcatcaatat taccgttatt tacagcgaat tccatccaat aaatagctct
     1141 attcaaatta taatattctg ataatg
//
LOCUS       DADMIB010000366         1158 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.377, whole genome shotgun sequence.
ACCESSION   DADMIB010000366 DADMIB010000000
VERSION     DADMIB010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1158)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1158)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1158
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.377"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..567
                     /locus_tag="JNZ89_004570"
                     /pseudo
     CDS             1..567
                     /locus_tag="JNZ89_004570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
     gene            complement(585..1086)
                     /gene="tnpA"
                     /locus_tag="JNZ89_004571"
                     /pseudo
     CDS             complement(585..1086)
                     /gene="tnpA"
                     /locus_tag="JNZ89_004571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000604919.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
     gene            1094..>1158
                     /locus_tag="JNZ89_004572"
     CDS             1094..>1158
                     /locus_tag="JNZ89_004572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence protein"
                     /protein_id="HAY8938185.1"
                     /translation="MKRLQAFKFQLRPGGQQECEM"
BASE COUNT          335 a          257 c          269 g          297 t
ORIGIN      
        1 ttaaacaatt actctgattt aaaagaaaca acctcagcaa caggtaaacc tgttttacgt
       61 tgggtagacc cgagttttga tcaaagcaaa tatgacagca tcgtctggaa cccaatcact
      121 tattatccgg tgccaaaacc ttctacccag gtagggcaga aagttctgga taaaattttg
      181 aactatacca acaccgaaat gaaagaagcg atagcgcagc gtaaaccact ggttaccacc
      241 gctgggccgc gtagtctgat tttccgtggg gccattaccg gtgtagatac cagcaaagaa
      301 gggctgcaat tctatgaagt ggttcctgtt gcattagtgg ttgcggggac gcaaatggct
      361 acaggtcacc gtaccatgga tactcgcctc tattttgaag gtgagctgat tgatgcagcg
      421 actaataaac cggttatcaa agtcgttcgt cagggctaag gtaaagacct gaataacgaa
      481 agtacgccaa tggctttcga aaatattaaa caagttattg atgacatggc gaccgatgcc
      541 accatgtttg acgttaacaa aaagtagttc cagacgcgcc atcgttagat ggcgcttttt
      601 atccggtgcg ccgtaaaacc ccatccttca gggcggggat ataaggcgcg gttttccacc
      661 tgaccaggtg tttgctgttg ttcaatgtat tggcggatga cggatattgg cgcacctccg
      721 cagctactgg caaaatagcc aggactccac aaaacgcctt tgtagtaata cctgactgca
      781 atatctggtc gatctcgtcg cagtaaccta cccgatacgc ctttgaggct gtttaccaga
      841 ctggatatcg ccagtttggg aggttagtta attaacaaat ggacgtgatc tggttcgcca
      901 tccatttcaa ccagttcagc ttcaaaataa gcacatacat ttgaaaagta agtgcgtagt
      961 ttttctgtcg cgtcaaaaaa tctggcgtcg gtatctggtg acaaagacca ggtgaacatg
     1021 catcaggaaa acacaatgcc ttccacgccg gatatcggtt tcttttttca caaaccaaag
     1081 tatcatttga cctgtgaaac gattacaggc atttaaattc cagttaagac caggtggtca
     1141 acaggagtgt gaaatgag
//
LOCUS       DADMIB010000367         1150 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.378, whole genome shotgun sequence.
ACCESSION   DADMIB010000367 DADMIB010000000
VERSION     DADMIB010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1150)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1150)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1150
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.378"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..261)
                     /locus_tag="JNZ89_004573"
                     /pseudo
     CDS             complement(1..261)
                     /locus_tag="JNZ89_004573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611134.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(376..1014)
                     /locus_tag="JNZ89_004574"
     CDS             complement(376..1014)
                     /locus_tag="JNZ89_004574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938186.1"
                     /translation="MINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSE
                     LAATLQKMINPSGGDGNCSGCALHACMAMLGYGVREAPVPNEISEYMTGFFHRHLEQI
                     DSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFNDGEKIMFLD
                     VQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC"
BASE COUNT          336 a          282 c          175 g          357 t
ORIGIN      
        1 caagcgctgt aactctttta tttgttttat agcggcagcc agttctgagg caggaacgac
       61 atcctctccg gcagcaacag cagtgagact tccttccaga tattattttt tccacttaag
      121 caacaggctg ggctgaatac catgcaaacg cgccacatgg gacaccgtca tgccaggctc
      181 cattgtctgc tgaataatgg caattttttc ctgaggagtt ttacgtttac gaagctccag
      241 ccccagcaaa gttccagtca tctcaaaatt agaactagtg ttagacatat atccaagcct
      301 atctcttatt ttaagataca tccactgtct ggcgtttcaa ggggccggct caaatctatg
      361 tacaggctct cagcatcagc aaagcctctt actcttccaa ctactactgt tagcatagtg
      421 atcaaattcc tgatcagata catgaattac ctgaaccgaa ctattttcat ctacaaatgc
      481 atctggcgat ttttctacag gatcataaag attaaatccc tttcctgttt gaacatccaa
      541 aaacataatt ttttcaccat cgttaaatcc agctatccaa tgagtggcct gttcaataga
      601 aatcattact acacttcctt ttgaagtgtt ttgtaaaata ttttctgcaa tacgctcacg
      661 aaatttacta taagtttcat taggatgtga cactatgcct tcactatcaa tttgctctaa
      721 atgcctatga aaaaatccgg tcatatactc tgatatttca ttaggtacgg gagcctctct
      781 tactccatac cctaacatag ccatacaagc atgaagcgca caccctgaac agttaccatc
      841 cccaccagac ggatttatca ttttctgtaa agtcgctgcc aattcagaat ctttatccat
      901 atcaccaaga cttttagagt ttaaagattc cagcaatttt ttaacattta catttccctc
      961 ctctgtatgt gcctcatatc cagcagttcc ctgtaacgac accccattaa tcatattgta
     1021 tcctgacagt atatatactc actatatttt cttcataaca aatatccctc tgatatgaca
     1081 acaaaaaacg gagccggatt cctgtttttg tgaactgcag ctattcgagt ctaaaaagtg
     1141 atccacttac
//
LOCUS       DADMIB010000368         1135 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.379, whole genome shotgun sequence.
ACCESSION   DADMIB010000368 DADMIB010000000
VERSION     DADMIB010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1135
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.379"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(89..544)
                     /locus_tag="JNZ89_004575"
     CDS             complement(89..544)
                     /locus_tag="JNZ89_004575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001462353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HAY8938187.1"
                     /translation="MVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLGR
                     LINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKIVCVIELDDPSHERADRIIR
                     DRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH"
BASE COUNT          354 a          251 c          211 g          319 t
ORIGIN      
        1 tttaaagaag agctcgtacg aaggtacggg ctttttttcg tatattgcac acaccggggg
       61 gatgagaagc cccgaccggg atacttagtt aatgcaccgg ttcactcttt gtcgccgcga
      121 ctaatgggcg aattttgtca cgagtctccc agaccggagg aatttcctcc aatttagtga
      181 cagaagctcg tacaaaaggc acccgtgcaa gagtcataat tgtatccaac caacggtcac
      241 gaataatgcg atccgccctt tcatgactcg ggtcatccag ctcaataaca cagactattt
      301 tattgttctt ctttgaaacc agaacataat ccattgccat gccattataa attgcaaaga
      361 aacgctttct ttcttcttcg ctaaactcag gttgttctgg aaagttgatc aagcgcccca
      421 gagagacctg gcaatggata tgacaataat gtccaaacca tttttccaga ttatcgaaat
      481 acattttttc acaacgagtg attaaccact cttttctttc caataaaata ccttcggcaa
      541 ccattccctg aaataactca tctcgctctt gccaacgaga gtcacgatag gttttctgcg
      601 gtatatagct ccttgtcgac gccttagcgg caggggaagt tgcagatgaa gggacgggtt
      661 gcgatttagc gatgattacc gatgaggcaa cttttcggag tgtcaatttt ctggcaacag
      721 caaaaccggc gataaatgca attgtcaaac aagttacaaa agccataaag ctcataatta
      781 attttcacct atccatgttg attatatttc attaccaatg ttactcgctg cagcgtgtta
      841 catgccaaca atgcaacgat caatatatag ttagtatcat gttttgatta ttacaaccat
      901 ccctatttag ccattgcggc ttgccttcca caaaaaaata acaacacaca atattagcaa
      961 agaattaatt aagattaacc ttacatttat aatattatcc ctaaagaata aatcagagga
     1021 atatattcgg tgttaaacag tcagtcaaag tatagcccat tgttgattaa acctcataag
     1081 caaaattggc accagatctc ctgtacaggt tgaatggccg aaaaaagata ggcag
//
LOCUS       DADMIB010000369         1132 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.380, whole genome shotgun sequence.
ACCESSION   DADMIB010000369 DADMIB010000000
VERSION     DADMIB010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1132)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1132)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.380"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..823)
                     /locus_tag="JNZ89_004576"
     CDS             complement(<1..823)
                     /locus_tag="JNZ89_004576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY8938188.1"
                     /translation="MLPTNNNHRLISNSFSTYSIDTSRAYENYLTHWTEWKNNRIQEE
                     QRDIAFQRLVSCLQNQETNLDLSELGLTTLPEIPPGIKSINISKNNLSLISPLPASLT
                     QLNVSYNRLIELPALPQGLKLLNASHNQLITLPTLPISLKELHVSNNQLCSLPVLPEL
                     LETLDVSCNGLAVLPPLPFSLQEISAIGNLLSELPPLPHNIHSIWAIDNMLTDIPYLP
                     ENLRNGYFDINQISHIPESILNLRNECSIDISDNPLSSHALQSLQRLTSSPDYHGP"
BASE COUNT          320 a          163 c          274 g          375 t
ORIGIN      
        1 gcgggccgtg gtagtccggc gaagaggtta atctttgcag ggattgcaga gcatgggatg
       61 acaatgggtt atcactaata tctattgaac attcattcct cagattaaga atgctttccg
      121 ggatatgact tatctgattt atgtcaaaat aaccgttcct taaattttcc ggcaggtatg
      181 gaatatcggt taacatattg tcgattgccc atatggagtg aatgttgtga ggtagagggg
      241 ggagttcact aagaagattc cctattgcgc taatctcttg taaagaaaat ggtaaaggtg
      301 gtaaaactgc cagcccatta catgatacat ctaatgtttc cagtagttct ggtaaaacag
      361 gaagagaaca taattgatta tttgagacat gaagctcctt caaagatatg gggagtgtgg
      421 gtagtgtgat tagttgattg tgggacgcat tcaataattt aagtccttga ggcaaagcag
      481 gcagttcaat aagtctgtta tagctgacat taagctgtgt aagggacgca ggcaatgggg
      541 agattaagct taaattattt ttacttatat taattgattt aattcccggg gggatttcag
      601 gtaatgttgt caggcctaat tcagacaagt ctaggttcgt ctcttggttt tgtagacatg
      661 atactagtcg ctgaaaagcg atgtctcgtt gttcttcttg tatgcggtta tttttccatt
      721 cagtccaatg ggttagataa ttttcatatg cgcggctagt gtcgattgaa taagtggaga
      781 acgaatttga aattaatctg tgattgttat ttgtcgggag cataaatatc agggcgtatt
      841 ctttatgttg agaggtgttg gattcttttt tatctgcttt gcaatgttat tggttccctt
      901 cagcagtaga caggaacttc tggaggaggc ggatatatag tttgtgtaag catattaact
      961 ccatatgtta tatattgaag aacttctgct ttacactatc ctaaactgga tcggtttaat
     1021 gtaaaaaaac gatacttttt gggggagggg gcaatttttc cttaaggtat gaaaaaagga
     1081 gctgaagcta tataatagct attaatgcca ctggtatcag tgaatcatgt at
//
LOCUS       DADMIB010000370         1111 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.382, whole genome shotgun sequence.
ACCESSION   DADMIB010000370 DADMIB010000000
VERSION     DADMIB010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1111)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1111)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.382"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..561
                     /gene="ospC4"
                     /locus_tag="JNZ89_004577"
     CDS             <1..561
                     /gene="ospC4"
                     /locus_tag="JNZ89_004577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC4"
                     /protein_id="HAY8938189.1"
                     /translation="QGFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLSTDNFKKIK
                     LRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNKKADIALYLLSKFNFTKQDV
                     AEMEKMNNNRYCNLYDVEYLLSKDGANYKVLEYFINNGLVDVNKKFQKANSGDTMLDN
                     AMKSKNPKMIDFLLKNGAILGKRFEI"
     gene            899..>1111
                     /locus_tag="JNZ89_004578"
     CDS             899..>1111
                     /locus_tag="JNZ89_004578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938190.1"
                     /translation="MSRKTQRYSTEFKAEAVKTVPENQLSISEGASRLSVPEGTLGQW
                     VTAARKGLNTPGSRTVAELESEVMQLR"
BASE COUNT          376 a          199 c          232 g          304 t
ORIGIN      
        1 caaggattca gagagttttg ttataacaaa aatattgatc ctgttagtct ggatagaatt
       61 ataaactttg tgtttcagct tgagtatcat ataccaagaa tgctaagtac agataacttc
      121 aaaaaaataa aactcagaga catatctttg gaggatgcga ttaaagcatc taattatgaa
      181 gagattaaca ataaagtgac tgataaaaaa atggctcatc aggcccttgc ttattcttta
      241 ggcaataaaa aagctgatat agcactttat ttactatcta aatttaattt tacaaaacaa
      301 gatgtcgcag agatggagaa aatgaacaac aatagatatt gtaatctgta tgatgttgaa
      361 tacttactta gtaaagatgg tgccaactat aaagtgctag aatattttat caataatgga
      421 ttggttgatg taaacaaaaa atttcaaaaa gcaaatagtg gggacactat gcttgacaat
      481 gcaatgaaaa gcaaaaatcc aaaaatgatt gattttttat taaaaaatgg agcaatatta
      541 ggcaaacgat ttgagatatg acctaaaagc tcggccaaat aataatgtcg tcgattatcg
      601 aagtcatcat gagtgattct gtccccacag tgcagcatca gcatgacagt gaattgtctg
      661 gcgtggtcca tttaatgaga tggagatggt ccctctttcc taaatagctg tgccgaatac
      721 cgctacactt ttgccagccc atgtttgcct ccggggaatg ggctgacggt tccttcaaaa
      781 tccattgcac gcagttatgt cggagcggga acttgactcc tgtctttacg ggagtgaggt
      841 agcctgagtt taacggacac tccttcctga aatagaatgg catcagaagg agccaataat
      901 gagcagaaaa acccaacgtt actctacgga gtttaaagcc gaagccgtca aaacggttcc
      961 tgaaaatcag ctttcgatca gtgaaggcgc ttcccgatta tctgttcctg aaggcacttt
     1021 aggacaatgg gttaccgctg caagaaaagg gctcaataca ccaggctccc gcacagtggc
     1081 tgagctggaa tctgaagtta tgcaactgcg t
//
LOCUS       DADMIB010000371         1091 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.383, whole genome shotgun sequence.
ACCESSION   DADMIB010000371 DADMIB010000000
VERSION     DADMIB010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1091
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.383"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>1091
                     /locus_tag="JNZ89_004579"
     CDS             <1..>1091
                     /locus_tag="JNZ89_004579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY8938191.1"
                     /translation="YATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGR
                     LTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVA
                     KRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRTRIQTVYQPGSFTPLIRVE
                     TATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW
                     LASCGLTVAQMKNQMDPVYTPARKIHLYHCDHRGLPLVLISTEGATEWCAEYDEWGNL
                     LNEENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY
                     PLSPVNSMDPLGLYEFKSKNIDDIGIFAL"
BASE COUNT          261 a          302 c          336 g          192 t
ORIGIN      
        1 gtatgccaca gacccggcag gtaaccgcct gcccgacccg gagctgcacc cggacagcac
       61 cctcagcatg tggccggata accgtatcgc ccgtgacgcg cactatcttt accggtatga
      121 ccgtcacggc aggctgacag agaaaaccga cctcatcccg gaagggggta tccgcacgga
      181 tgatgagcgc acccactggt accattacga cagtcagcac cggctggtgc actacacgcg
      241 gacacaatat gcagagccgc tggtcgaaag tcgctatctt tacgacccgc tgggccgcag
      301 ggtggcaaaa cgggtatggc ggcgtgaacg ggacctgacg ggctggatgt cgctgtcacg
      361 gaaaccggaa gtgacctggt acggctggga cggcgaccgg ctgaccacaa tacagaacga
      421 cagaacccgc atccagacgg tttatcagcc gggaagcttc acgccactca tcagagttga
      481 aaccgccacc ggtgagctgg cgaaaacgca gcgccgcagc ctggcggatg cccttcagca
      541 gtccggcggc gaagacggtg gcagtgtggt gttcccgccg gtgctggtgc agatgctcga
      601 ccggctggaa agtgaaatcc tggctgaccg ggtgagtgag gaaagccgcc gctggctggc
      661 atcgtgcggc ctgaccgtgg cgcagatgaa aaaccagatg gacccggtgt acacgccggc
      721 gcgaaaaatt cacctgtacc actgcgacca tcgcggcctg ccgctggtgc ttatcagcac
      781 ggaaggggca acagaatggt gcgcagaata cgatgagtgg ggcaacctgc tgaatgaaga
      841 gaacccgcat catctgcagc agctcattcg cctgccgggg cagcagtatg atgaggagtc
      901 cggcctgtat tacaaccgcc accgctatta tgacccgctg caggggcgat atatcactca
      961 ggatccgatt gggctgaagg ggggatggaa tttttatcag tatccgctga gcccggtgaa
     1021 tagcatggat ccattaggat tatatgaatt taaatcaaaa aatatagatg atattggaat
     1081 atttgcattg g
//
LOCUS       DADMIB010000372         1090 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.384, whole genome shotgun sequence.
ACCESSION   DADMIB010000372 DADMIB010000000
VERSION     DADMIB010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.384"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(12..323)
                     /locus_tag="JNZ89_004580"
     CDS             complement(12..323)
                     /locus_tag="JNZ89_004580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HAY8938192.1"
                     /translation="MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGG
                     VLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
                     Y"
     gene            486..582
                     /gene="ffs"
                     /locus_tag="JNZ89_004581"
     ncRNA           486..582
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="JNZ89_004581"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            702..1055
                     /locus_tag="JNZ89_004582"
     CDS             702..1055
                     /locus_tag="JNZ89_004582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HAY8938193.1"
                     /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS
                     DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD
                     GKRMIYGGFESIIDE"
BASE COUNT          245 a          275 c          315 g          255 t
ORIGIN      
        1 cccggagagg gttagtagtt ccagcgataa cgctgcaagt cgatttgccc gcttcccgat
       61 accatcacac cttctgccag taatgcctgt cgctgacgct gtaaatccgg tccggttagc
      121 gaaattgtgc cgtggcgatt aaccacccgg tgccagggta aggtgctgcc ttcagggaga
      181 cgctttaaca caccgcccac ctggcgcgcg gcgcggggcg atcccgccag tttcgccaca
      241 tcaccgtaag tggtgacata gccttcggga atagcggcga cgatttgcca gacgcgttgg
      301 ggaaatgaat cttctttttc catcttttct tcctgaggta atttttcagc ataatctgga
      361 aaaacgcccg agtgaagtcg cattgcgcaa gaaaccagca tctggcacgc gatgggttgc
      421 aattagccgg ggcagcagtg ataatgtgcc tgcgcgttgg ttctcaacgc tctcaatggg
      481 ggctctgttg gttctcccgc aacgctactc tgtttaccag gtcaggtccg gaaggaagca
      541 gccaaggcag atgacgcgtg tgccgggatg tagctggcag ggcccccacc catttctgcc
      601 tcccaccgtt tcgtcaaaaa aacccaacat ggctaaactt taaccacaac tgacgtcgca
      661 agaattgtct ggctgcgcag tacgcttcgg aggtatgtct gatgaagtat gttgatggtt
      721 ttgtggttgc cgttcctgcc gataaaaagg atgcctatcg ggaaatggcc gctaaggctg
      781 cgccattgtt taaagagttt ggcgcgcttc gtattgtcga atgctgggcc agcgatgtac
      841 cggatggcaa agtgaccgat tttcgtatgg cggtgaaagc ggaagagaat gaagaggttg
      901 tctttagctg gattgaatac ccttcaaaag aggtccgcga cgctgctaat caaaagatga
      961 tgtcggaccc acggatgaaa gagttcggcg agtccatgcc gtttgacggc aagcgaatga
     1021 tctatggcgg attcgagtca atcatcgacg aataggtagc gtgacgggct gtgcggcgtg
     1081 ccgtcagccc
//
LOCUS       DADMIB010000373         1084 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.385, whole genome shotgun sequence.
ACCESSION   DADMIB010000373 DADMIB010000000
VERSION     DADMIB010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1084
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.385"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..447
                     /locus_tag="JNZ89_004583"
     CDS             <1..447
                     /locus_tag="JNZ89_004583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014837283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938194.1"
                     /translation="LPISAADKRRFYYYFQEKNTPNIERFFVFDSSEYRYALNMREVV
                     FHQFLSDGLRPIVDEDDYFNVHITLVNGGPVIPLSVEPDAPQNEETDDIGQLNAFFDA
                     LDCEPETTDRFMITDEDGEDAFIRIGSIAMVRVALDVLEPVEDDDE"
BASE COUNT          278 a          212 c          260 g          334 t
ORIGIN      
        1 ttgcccattt cagcagcgga taagcggagg ttttattatt attttcagga aaaaaacacc
       61 ccaaacatag aacgcttctt cgtttttgat tcttccgagt atcgttatgc gttaaatatg
      121 cgtgaagtgg tatttcatca gttcctttct gatggtctgc ggccaatcgt tgacgaagac
      181 gattatttta atgtccatat cacgctggta aacggcggac cagtgattcc actgagtgtt
      241 gagccagatg cgccgcaaaa cgaagagacg gatgatatcg gccagttgaa tgcatttttt
      301 gacgcgctgg attgcgagcc tgaaaccacg gatcgtttta tgataaccga cgaagatgga
      361 gaagatgctt tcattcgtat tggttctatc gctatggtgc gagttgcgct tgatgtgctg
      421 gaaccagtgg aagacgatga tgagtagtat tgaatggatt gatttcttaa gaaatggtac
      481 tgagtataca tgtgagtata caaagtaact tcgtattttt aaaaatccat tgatttcata
      541 ttgttgagtc tggaatcgcg gtgcggcctt cgcaccacac cgtatgcaaa tcgagtcgct
      601 caagagcggc tttttttgtg tctgaaatca cccatatccg tgcagtatat aggcctgcca
      661 gaaaagcagt tcagtattct tcattttgta gtcgatggtc ccaagtttgc tctggctgga
      721 agctgcatcg tccacattac gtgggcaggg tggtttcgct atgctacttg aacgttttga
      781 ccatgtggct caggtagcta ataccaaaag acgtcatttt gtctccacgc ccaccttggt
      841 gaacattcaa taaatagttt cggtcgagag cagttatgta gggctagcag acgagatgcg
      901 cagacatctt gttgaagaca attttactga ccacctgaga acgctattct accgaataat
      961 atttattatc ttggcgaata atgatgatta cctgtgtaac tatggtttta tgctgatggg
     1021 accggcagta caatttctgt agtgtactcg caatttcagg tctctggcgt ttattctggt
     1081 gcaa
//
LOCUS       DADMIB010000374         1081 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.387, whole genome shotgun sequence.
ACCESSION   DADMIB010000374 DADMIB010000000
VERSION     DADMIB010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.387"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..152)
                     /locus_tag="JNZ89_004584"
     CDS             complement(<1..152)
                     /locus_tag="JNZ89_004584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938195.1"
                     /translation="MILRHRTGPAFQAIKDSLAVGLNALTLTDITKNATYGVEIESLV
                     LEINAPA"
     gene            complement(149..352)
                     /locus_tag="JNZ89_004585"
     CDS             complement(149..352)
                     /locus_tag="JNZ89_004585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY8938196.1"
                     /translation="MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAIT
                     PYTLMQAIAAEGDVVVSGATEPE"
     gene            598..933
                     /gene="iraM"
                     /locus_tag="JNZ89_004586"
     CDS             598..933
                     /gene="iraM"
                     /locus_tag="JNZ89_004586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HAY8938197.1"
                     /translation="MKWIVIDTVIQPSCGISFSVIWSKIKLIIWYQSDAFLPPESIFT
                     LTHTGIMLNNKVLPVTIYNVVPFNKTFWNLIKNSQECPTNTDNVLNECFNNRCTLQIC
                     PYGLKQQSP"
BASE COUNT          350 a          259 c          187 g          285 t
ORIGIN      
        1 gccggtgcat ttatctccag caccagactt tctatctcaa cgccatacgt tgcatttttg
       61 gtaatatccg tcagcgtcag tgcatttagt cccactgcca gactgtcttt tatggcctgg
      121 aatgccgggc cagtacgatg acgtagtatc actccggctc agttgcacca ctgaccacca
      181 catcaccttc tgctgcaatc gcctgcatca gggtataagg ggttatggcc accggactac
      241 caaacggctg ccagccctct ttcagtttat gtgtcagctt ttccgcaaga tctgacggcg
      301 gcgccgccct gacaacatca tagtgtttaa atgccatggt tctttccacc atctgaaaaa
      361 taattcttta aaatacctga catgtaatac agaaaaaaca caaaaccata ccttaaataa
      421 aaacctgatt atcaagcaga tatgcatgga taaactacaa gacgagatat aaaccaccct
      481 gcatttaaat aaacaataaa caacatcaga aaaataattc tgctctatgg tttacattca
      541 aaaatatcat ttatactttt cagaacatca ccagcaaggc ataaacaagg aaactaaatg
      601 aagtggattg tgattgatac agttatccag ccatcatgcg gaatatcttt ttcagtcata
      661 tggagtaaaa taaaattaat aatctggtat caatcggatg ctttcttacc tcctgaaagt
      721 atatttacac tgactcacac aggcatcatg ctcaataaca aagtgctacc tgtaaccatt
      781 tacaacgtag taccattcaa taaaacattc tggaatttaa tcaaaaacag ccaggaatgc
      841 cctacaaata cagataacgt attgaatgaa tgctttaata accgttgcac tctgcaaata
      901 tgtccttatg gactaaaaca acaaagtcca taaggagttt actcacatct gacaaaatca
      961 atataaacag cccctccgga gaggggctgg agagtggcgc tatgtgccat tgcatggtgc
     1021 cgggtgcctc ccggtgaatt cagtaccagc acctgaatcc gcgattatcc catataccta
     1081 c
//
LOCUS       DADMIB010000375         1070 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.388, whole genome shotgun sequence.
ACCESSION   DADMIB010000375 DADMIB010000000
VERSION     DADMIB010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1070
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.388"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(46..122)
                     /locus_tag="JNZ89_004587"
     tRNA            complement(46..122)
                     /locus_tag="JNZ89_004587"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(86..88),aa:Arg,seq:tct)
     gene            complement(136..212)
                     /locus_tag="JNZ89_004588"
     tRNA            complement(136..212)
                     /locus_tag="JNZ89_004588"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(176..178),aa:Arg,seq:tcg)
     gene            complement(220..295)
                     /locus_tag="JNZ89_004589"
     tRNA            complement(220..295)
                     /locus_tag="JNZ89_004589"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(260..262),aa:Ile,seq:cat)
     gene            complement(345..693)
                     /locus_tag="JNZ89_004590"
                     /pseudo
     CDS             complement(345..693)
                     /locus_tag="JNZ89_004590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000382062.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
BASE COUNT          239 a          308 c          263 g          260 t
ORIGIN      
        1 acatttaaaa aaaagcccgc aaaagcgagc cagggaaaat aagtgtggcg cgttgtactg
       61 gattcgaacc agtgaccgat tgcttagaag gcaattgctc tgtccggctg agctaacaac
      121 gcaggataca gataatggac cgccttcggg gacccgaact ccgcgcaacc agcttcgaag
      181 gctggcgctc tttcctgatg agctaatggc ggtatgtgat ggtggccctt gctggatttg
      241 aaccagcgac ctggcgatta tgagtcgctc gctctcacca ctgagctaaa gggccgggag
      301 cagaataata atggtgcgta attaattctg caatctcatc cgtttcaaac gattaaatcc
      361 tgaacttccc tgactgtctg ctcaaaacgt ccggtctcca gttcaacgcc aatcgcacga
      421 cgcccgagcg ccagtgcagc ttttaccgtt gaacctgagc ccataaaaaa aatctgcaac
      481 caggtctccc ggacgactgc ttgcgctgat tatctgctgc agcatttctg ccggtttttc
      541 gcacggatgt ttcccgggat agaactgcac cggtttatgt gtccacacat ccgtgtacgg
      601 cacctgcgcc gtcacaccaa aataccgccg cagatgctta tattcactct gcagctccac
      661 atactgccgg ttcagtgacg tatacgtatc caccagctgg tggtggggct tttccagttc
      721 accgcgctga tgtttctctt ctgccacccg ggcaaacagc gactgtaatt tcagataatc
      781 gctttcgttc ggtagctgcc actgactggc actgaaccag tgcgacacca tgtttttctt
      841 tcctgtggca tctgcaatct gttttgccgt tatccccagg gccgcgcgcg catcacgaaa
      901 gtaagaaatc agcggggcca tcacatgctg tttcagtgca ctgcccttcg ccgcataccc
      961 ggcatctttc ggacgatacg gcccctgata atgttccgcg aacagaatgc gctctgtggc
     1021 ggggaaatac gcccgcaggc tttccttgtt gcatccgttc cagcgtccgg
//
LOCUS       DADMIB010000376         1041 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.389, whole genome shotgun sequence.
ACCESSION   DADMIB010000376 DADMIB010000000
VERSION     DADMIB010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1041)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1041)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.389"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            102..620
                     /locus_tag="JNZ89_004591"
                     /pseudo
     CDS             102..620
                     /locus_tag="JNZ89_004591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          302 a          242 c          222 g          275 t
ORIGIN      
        1 ctctgaccac aatctgccgg ttacgccgaa tctgctgaat cagaacttta cgcccacagc
       61 acctaatcag gtctgggtcg cagattcagt tgtccaggcc ttccgaaatc aaccgactga
      121 aggcgctggt cgcgaaactg cagcgtatgc agttcggtaa aagctcagaa aaacttcgcg
      181 caaaaaccga acggcggata caggaagcac aggagcgaat cagcgcactt caggaggaaa
      241 tggcggaaac actgggtgag caatatgacc cggtactgcc atcttccctg cgccagtctt
      301 cagcccgtaa accgttacca gcctcacttc cccgtgcccc ccgggtcatc cggccggaag
      361 aggaatgctg tccggcctgt ggtggtgaac tcagtccact gggatgtgat gtgtcagagc
      421 agctggagct tatcagcagc gcctttaagg ttatcgaaaa acaacgccct aaactggcct
      481 gtcgccggtg cgaccatatc gtgcaggcac cggtgccttc aaaacccatt gcacgcagtt
      541 atgccggagc ggggcttctg gcccatgttg ttaccggaaa gtatgcagac catctgccat
      601 tataccgcca aagtgatcta ctattccaca cagctattta gctctctttt tgttgagctc
      661 ccatgattct ttcatttatt gttactaatt attttatgtt atcatgatgt tagaacacgc
      721 tctgctctgt gtctctattt tatctatcat attctgagga ttaactacat aacaaggcgc
      781 aagatatata tccaaaaaca aataataccg ttgcaataat tcctttcagt aaaggaggtg
      841 tgattaattt caggggattt cagagtgaaa attgtacaac atattgaaat atgttcattt
      901 cgttataata cacacaagaa aatattaagt tagataatat attctaaata accatagata
      961 aaaatgcaca taatggggaa tattttatga aaatacctga agcagtaaat catattaatg
     1021 ttcagaataa tattgatctt g
//
LOCUS       DADMIB010000377         1040 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.390, whole genome shotgun sequence.
ACCESSION   DADMIB010000377 DADMIB010000000
VERSION     DADMIB010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.390"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            67..666
                     /locus_tag="JNZ89_004592"
     CDS             67..666
                     /locus_tag="JNZ89_004592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HAY8938198.1"
                     /translation="MRKVCAAILSAAICLAVSGAPAWASEHQSTLSAGYLQPHTDMPG
                     SDDLKGINVKYRYEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAW
                     GAGVQFNPTESVAIDLAYEGSGSGDWRTDGFIVGVGYKF"
     gene            730..>1040
                     /locus_tag="JNZ89_004593"
     CDS             730..>1040
                     /locus_tag="JNZ89_004593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004981847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8938199.1"
                     /translation="MAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTD
                     NNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPTDAPGTLNAFLNAPKDGDLRPEV
                     M"
BASE COUNT          230 a          238 c          324 g          248 t
ORIGIN      
        1 ttttataacc cagattcggg caccagaaat ggtgcctttt ttattgcaga aaagcgagag
       61 gtaattatgc gtaaagtttg tgcagccatt ttgtccgcag ccatctgtct ggctgtatcc
      121 ggtgcgcctg catgggcgtc tgaacatcag tccacgctga gcgccgggta tcttcagccc
      181 catactgata tgccaggcag cgatgacctg aagggcatta acgtgaaata ccgttatgag
      241 tttacggaca cgttggggct ggtgacgtca ttcagctatg ccaacgctga agatgagcaa
      301 aaaacgcatt acagcgatac ccgctggcat gaggattccg tgcgtaaccg ctggttcagc
      361 gtgatggcgg ggccgtctgt gcgcgtgaat gaatggttca gcgcgtatgc gatggcgggc
      421 gtggcttaca gccgtgtgtc gaccttctcc ggggattatc tccgcgtaac tgacaacaag
      481 gggaaaacgc acgatgtgct gaccgggagt gatgacaacc gccacagcaa cacgtctctg
      541 gcgtgggggg ctggcgtgca gtttaacccg accgaatccg tggccattga ccttgcttat
      601 gaaggttccg gcagtggcga ctggcgcact gacggtttca tcgtgggtgt cggttataag
      661 ttctgattag ccaggtaaca cagtgttatg acagcccgct ggttcaggcg ggctttttgt
      721 ggggtgaata tggcagtaaa gatttcaggt gtactgaaag atggggcggg taaacctgtc
      781 gtaaattgtg cgattgaact gcgggccaga agaaccagtc cgaccgttgt ggcacacgtt
      841 gttgccactt gcgtgacgga caataacggt gcttatgtga ttgaggctga gccggggtat
      901 tacgaggttg cgcttcactg taacggctgg cagccaaccc gtgtcgggga tattgatgtg
      961 gcaccgactg atgcaccggg gacactgaac gcgtttctga atgcaccaaa ggatggtgat
     1021 ttacgtccgg aggtgatgaa
//
LOCUS       DADMIB010000378         1037 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.391, whole genome shotgun sequence.
ACCESSION   DADMIB010000378 DADMIB010000000
VERSION     DADMIB010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1037
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.391"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(137..952)
                     /locus_tag="JNZ89_004594"
     CDS             complement(137..952)
                     /locus_tag="JNZ89_004594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /protein_id="HAY8938200.1"
                     /translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLY
                     GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIP
                     GKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGL
                     VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG
                     RVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
BASE COUNT          307 a          240 c          212 g          278 t
ORIGIN      
        1 atttatgagt aaaggattat gtccacgata agcacctggg tcgattcctg ggaggcggcc
       61 atgagggtag ggaagcgccg tcccgtcaag tcagcgtaat gctctgccag tgttacaacc
      121 aattaaccaa ttctgattag aaaaactcat cgagcatcaa atgaaactgc aatttattca
      181 tatcaggatt atcaatacca tatttttgaa aaagccgttt ctgtaatgaa ggagaaaact
      241 caccgaggca gttccatagg atggcaagat cctggtatcg gtctgcgatt ccgactcgtc
      301 caacatcaat acaacctatt aatttcccct cgtcaaaaat aaggttatca agtgagaaat
      361 caccatgagt gacgactgaa tccggtgaga atggcaaaag cttatgcatt tctttccaga
      421 cttgttcaac aggccagcca ttacgctcgt catcaaaatc actcgcatca accaaaccgt
      481 tattcattcg tgattgcgcc tgagcgagac gaaatacgcg atcgctgtta aaaggacaat
      541 tacaaacagg aatcgaatgc aaccggcgca ggaacactgc cagcgcatca acaatatttt
      601 cacctgaatc aggatattct tctaatacct ggaatgctgt tttcccgggg atcgcagtgg
      661 tgagtaacca tgcatcatca ggagtacgga taaaatgctt gatggtcgga agaggcataa
      721 attccgtcag ccagtttagt ctgaccatct catctgtaac atcattggca acgctacctt
      781 tgccatgttt cagaaacaac tctggcgcat cgggcttccc atacaatcga tagattgtcg
      841 cacctgattg cccgacatta tcgcgagccc atttataccc atataaatca gcatccatgt
      901 tggaatttaa tcgcggcctc gagcaagacg tttcccgttg aatatggctc ataacacccc
      961 ttgtattact gtttatgtaa gcagacagtt ttattgttca tgatgatata tttttatctt
     1021 gtgcaatgta acatcag
//
LOCUS       DADMIB010000379         1029 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.392, whole genome shotgun sequence.
ACCESSION   DADMIB010000379 DADMIB010000000
VERSION     DADMIB010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1029)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1029)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.392"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            66..1029
                     /locus_tag="JNZ89_004595"
                     /pseudo
     CDS             66..1029
                     /locus_tag="JNZ89_004595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627495.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS21 family transposase"
BASE COUNT          247 a          279 c          269 g          234 t
ORIGIN      
        1 gatccacacc caacgcctga aatcagatcc agggggtaat ctgctctcct gattcaggag
       61 agcttatggt cacttttgag acagttatgg aaattaaaat cctgcacaag cagggaatga
      121 gtagccgggc gattgccaga gaactggggc tctcccgcaa taccgttaaa cgttatttgc
      181 aggcaaaatc tgagccgcca aaatatacgc cgcgacctgc tgttgcttca ctcctggatg
      241 aataccggga ttatattcgt caacgcatcg ccgatgctca tccttacaaa atcccggcaa
      301 cggtaatcgc tcgcgagatc agagaccagg gatatcgtgg cggaatgacc attctcaggg
      361 cattcattcg ttctctctcg gttcctcagg agcaggagcc tgccgttcgg ttcgaaactg
      421 aacccggacg acagatgcag gttgactggg gcactatgcg taatggtcgc tcaccgcttc
      481 acgtgttcgt tgctgttccc ggatacagcc gaatgttgta catcgaattc actgacaata
      541 tgcgttatga cacgctggag acctgccatc gtaatgcgtt ccgcttcttt ggtggtgtgc
      601 cgcgcgaagt gttgtatgac aatatgaaaa ctgtggttct gcaacgtgac gcatatcaga
      661 ccggtcagca ccggttccat ccttcgctgt ggcagttcgg caaggagatg ggcttctctc
      721 cccgactgtg tcgccccttc agggcacaga ctaaaggtaa ggtggaacgg atggaacagt
      781 ttttacatcc cactaatgac tcgcctgcgc ccgatgggga gcactgtcga tgttgaaaca
      841 gccaaccgcc acggtctgcg ctggctgcac gatgtcgcta accaacgaaa gcatgaaaca
      901 atccaggccc gtccctgtga tcgctggctc gaagagcagc agtccatgct ggcactgcct
      961 ccggagaaaa aagagtatga cgtgcatcct ggtgaaaatc tggtgagctt cgacaacccc
     1021 cccagcatc
//
LOCUS       DADMIB010000380         1026 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.393, whole genome shotgun sequence.
ACCESSION   DADMIB010000380 DADMIB010000000
VERSION     DADMIB010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.393"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..442
                     /locus_tag="JNZ89_004596"
     CDS             <1..442
                     /locus_tag="JNZ89_004596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001193639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HAY8938201.1"
                     /translation="GVYTEMKEDDVGLYVRGRLLIDDDPLAKRAHAHMKAGSLTGLSI
                     GYVLKDWEYDRTKEAFLLKEIDLWEVSLVTFPSNDEARISDVKNALARGEIPEQKKIE
                     RVLRDVGLSRTQAKAFMAGGYGALSLRDAEDVSSALNALKNLNF"
     gene            457..>1026
                     /locus_tag="JNZ89_004597"
     CDS             457..>1026
                     /locus_tag="JNZ89_004597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HAY8938202.1"
                     /translation="MAVDIKDVEQVAQELQQKFDDFKAKNDKRVDAIEQEKGKLAGQV
                     ETLNGKLSELENLKSDLEKELLELKRPAGGAQNKLATEHKEAFVGFLRKGRGDGLRDL
                     ERKALQVGTDEDGGYAVPEALDRNILTLLKDEVVMRQEASVITVGGSDYKKLVNLGGT
                     ASGWVGETDARSQTATSKLGLIEPFMGEIY"
BASE COUNT          275 a          248 c          311 g          192 t
ORIGIN      
        1 cggtgtttac accgaaatga aggaagacga tgtcgggctt tacgtcaggg gacggttgct
       61 tattgatgat gatcccctcg caaaacgcgc acatgcacac atgaaggccg gttcgttaac
      121 cggcctttct attgggtacg tcctgaaaga ctgggaatac gaccggacga aagaagcctt
      181 tctgctgaaa gaaatcgacc tctgggaagt cagtctggtg acgttcccgt ctaacgacga
      241 ggcgcggatc agcgacgtca agaacgcgct ggcccgcggg gaaatccccg aacagaaaaa
      301 aatcgaaaga gtcctgcgtg atgtcggact ctcccgtacc caggccaaag cattcatggc
      361 cgggggctat ggcgcactgt ccctgcgcga cgctgaggat gtgagctctg cactgaatgc
      421 actgaaaaat ctgaacttct aatcaggaga aatacgatgg cggtagatat taaagatgtc
      481 gaacaggtcg cgcaggagct gcagcagaag tttgacgact tcaaagcaaa gaacgacaag
      541 cgcgtggatg cgattgagca ggaaaaaggc aagcttgccg ggcaggtgga aaccctgaac
      601 gggaaactca gcgagctgga aaacctcaaa agcgatcttg aaaaagagct gcttgagctg
      661 aaacgtccgg caggtggtgc gcaaaataaa ctggccaccg agcataaaga agcgtttgtg
      721 ggcttcctgc gtaaaggccg tggagatggt ctgcgcgatc tggagcgcaa ggcattacag
      781 gtgggcaccg atgaagacgg cggctatgcc gtgccggaag cactggatcg caacattctc
      841 accctgctga aagatgaagt ggtgatgcgc caggaagcct cggtgatcac cgttggtggt
      901 tccgactaca aaaaactggt gaatctgggc ggcacggctt ccggatgggt tggcgagact
      961 gacgcgcgct cccagactgc cacctcaaaa ctgggcctga ttgaaccttt catgggggaa
     1021 atctac
//
LOCUS       DADMIB010000381         1018 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.394, whole genome shotgun sequence.
ACCESSION   DADMIB010000381 DADMIB010000000
VERSION     DADMIB010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.394"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..767)
                     /gene="ipaH3"
                     /locus_tag="JNZ89_004598"
     CDS             complement(<1..767)
                     /gene="ipaH3"
                     /locus_tag="JNZ89_004598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase IpaH3"
                     /protein_id="HAY8938203.1"
                     /translation="MSIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGE
                     NRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLPPQITVLEITQNALISLPELPASL
                     EYLDACDNHLSTLPELPASLKHLDVDNNQLTMLPELPALLEYINADNNQLTMLPELPT
                     SLEVLSVRNNQLTFLPELPESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCRENR
                     ITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA"
BASE COUNT          289 a          163 c          249 g          317 t
ORIGIN      
        1 tgggcggttt gttgcgacag agactccctg atccgtgagg acagaggatt gtcttcgagg
       61 atgatagtgc aggtcggatc aaggctaagt atattttccg gaatgtgtgt gatgcgattc
      121 tcgcggcacc ggaaaaatat ctcggtttcc tctgagtgat gatttcttac aggtacggct
      181 ggtaggcttt ccagaagatt agtacttaca tcgagcgctt ccagtgattc aggtaactca
      241 gggagaaatg tcagctggtt atttcttact gagagcactt ccagcgatgt aggtaattca
      301 ggaagcatgg ttagctgatt gttatctgca ttaatatatt ccagcaatgc aggcaattca
      361 ggaagcatgg ttagttggtt gttatctaca tcaagatgtt tcagagatgc gggtaattca
      421 ggaagtgttg acaggtgatt gtcacaggcg tcaaggtatt ccagcgatgc tggcaattct
      481 ggtaatgata ttagggcatt ctgagtaatt tccagaacag tgatttgagg tggtaagttg
      541 tcaggtagcg aggacagatt taaacgattc agttgaagct cactgaactg attgatgaga
      601 cattctttaa gtagggagac cgcttcattc cgattttcac cggggagcgc ttgtttttcc
      661 catttatccc atgctgaaaa gtaatcagca tatgtaccgg aaatagtgtt ataaaaagaa
      721 ttttgggaca atgaaaagtt attatttatc ggtaacatga tggacattca gttaaagccg
      781 atggacaaat ggctttgtta aaagaaataa gtaggagttt ttatgaagtt cattccatga
      841 aatgaacttc agcacttttt tattataaaa ggacaaacaa aattggctgt aaaaaaacga
      901 tactgtttca gttaactgtg aatagcttgc ttgcaccgta ttgttcttgt ttttcggtta
      961 gttaaacatc gtacttcata tttgaacgtt ctgccggaat gcattatcaa tagaggta
//
LOCUS       DADMIB010000382         1009 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.395, whole genome shotgun sequence.
ACCESSION   DADMIB010000382 DADMIB010000000
VERSION     DADMIB010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.395"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            201..395
                     /gene="bfd"
                     /locus_tag="JNZ89_004599"
     CDS             201..395
                     /gene="bfd"
                     /locus_tag="JNZ89_004599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HAY8938204.1"
                     /translation="MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIR
                     AAREVMQDELMQMPEFKEIA"
     gene            468..944
                     /gene="bfr"
                     /locus_tag="JNZ89_004600"
     CDS             468..944
                     /gene="bfr"
                     /locus_tag="JNZ89_004600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HAY8938205.1"
                     /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVE
                     YHESIDEMKHADKYIERILFLEGTPNLQDLGKLGIGEDVEEMLQSDLRLELEGAKDLR
                     EAIAYADSVHDYVSRDMMIEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD"
     gene            complement(941..>1009)
                     /locus_tag="JNZ89_004601"
     CDS             complement(941..>1009)
                     /locus_tag="JNZ89_004601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY8938206.1"
                     /translation="PFGPFLAAAGFVIGWDSLLIGR"
BASE COUNT          301 a          205 c          231 g          272 t
ORIGIN      
        1 gctaaagttc tgggttaatt acacgttaat tagttttgaa ttgaaaaggg cgcttcggcg
       61 ccctttttgc tgcccgtaat ttgagctcga aatatttagt cgtaattttg ctcgctgaac
      121 tatggcgcaa ataaaactgt gctattgtaa tcataatcat tctcatttac actttgcgca
      181 gaatttgaac gggagcaatc atgtacgttt gtttgtgtaa tggtgtaagt gacaaaaaaa
      241 ttcgccaggc agtccgtcag tttcatccgc aatctttcca acaattgcgt aagtttattc
      301 ctgtgggaaa tcaatgcggt aagtgcattc gcgccgcgcg cgaagtgatg caggacgagt
      361 tgatgcagat gccagaattt aaagagattg cctgaagacc acgcttattt tttgacatcc
      421 cgctagcccc atctacgctc taatagtgga agcggaggga ctataaaatg aaaggtgatg
      481 ttaaaatcat aaattatctc aataaactat tgggaaatga gcttgtcgca atcaatcagt
      541 attttctcca tgcccggatg tttaaaaact ggggcctgat gcgtctcaat gacgtcgaat
      601 accatgaatc catcgatgag atgaaacacg ctgataaata tatcgagcgt attttgtttt
      661 tagaaggaac ccccaactta caggatttag gcaaactggg gattggtgaa gatgtcgagg
      721 agatgctgca atccgacctg cgattagaac tggaaggcgc gaaggatctg cgtgaggcta
      781 tcgcatatgc cgacagcgtt catgactatg ttagccgcga tatgatgatc gagatccttg
      841 ctgatgaaga aggtcatatc gactggctcg aaactgaact ggatctcatc ggtaaaattg
      901 gcctacaaaa ttacctgcaa tcacaaatta aagttaaaga ttaacggcct atcagcaaac
      961 tatcccagcc tataacgaaa cccgcagccg ccagaaatgg cccaaaagg
//
LOCUS       DADMIB010000383         1004 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.396, whole genome shotgun sequence.
ACCESSION   DADMIB010000383 DADMIB010000000
VERSION     DADMIB010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.396"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..349
                     /locus_tag="JNZ89_004602"
     CDS             <1..349
                     /locus_tag="JNZ89_004602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000874238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938207.1"
                     /translation="EGGEGHLSSFFVQTDKASINVAYHHTVNQQKELGTFGAFDHDWH
                     TLAFKFKGSNSINVTPVLDGVDGQAFDLVKWANTANGLNRFVITDITGSAETYPVLID
                     TVEVKANKAGAAA"
     gene            489..671
                     /locus_tag="JNZ89_004603"
     CDS             489..671
                     /locus_tag="JNZ89_004603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1378 family protein"
                     /protein_id="HAY8938208.1"
                     /translation="MTFIHQVMLYFCTAVCVLYLLSGGYRAVRDFWCRQIDKRAAEKI
                     SASQSAGSKPEEPVTP"
     gene            595..942
                     /locus_tag="JNZ89_004604"
     CDS             595..942
                     /locus_tag="JNZ89_004604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001427342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF826 domain-containing protein"
                     /protein_id="HAY8938209.1"
                     /translation="MIKGPLRKSAPVSQPEANPKNPLLLNNPFQRENPMSEITSLVTA
                     EAVKEVLRSEEVRSALKQKLRQNLESRLDAEVDAILDELLGVAAVPEPEGIAGDGSAS
                     DGGEPTPDSDMMM"
BASE COUNT          275 a          207 c          272 g          250 t
ORIGIN      
        1 tgagggtggt gaaggccatc tgagttcttt ctttgtccag acagataaag ccagtattaa
       61 tgttgcatac catcatacag ttaatcaaca aaaagaactt ggcacgtttg gcgcattcga
      121 ccatgactgg catacgcttg catttaaatt taagggcagt aacagcatta atgttactcc
      181 ggtgcttgat ggtgtggatg gacaggcgtt tgacctggtg aaatgggcca atactgctaa
      241 tggactcaac aggtttgtca ttacggatat tacaggtagt gcagaaacct accctgtact
      301 tattgatacg gtggaagtta aagcaaacaa agctggagca gccgcataat tgctaaaaaa
      361 agccgccagc ggcaggaatg gaagctggcg gaggtaatcc caatggagaa tgtaaagaaa
      421 agatgctttc gtacattggt tttttaaatg aaaacaattc tcattgtcaa ccataacggt
      481 aagaaattat gacatttatt catcaggtga tgctgtactt ctgtacggcg gtctgtgtgc
      541 tgtatcttct ttcgggtggg tacagggctg tgcgcgattt ctggtgcagg cagattgata
      601 aaagggccgc tgagaaaatc agcgccagtc agtcagccgg aagcaaaccc gaagaacccg
      661 ttactcctta acaacccctt tcagcgagaa aatcccatgt cagaaatcac atccctggtc
      721 actgcagagg cagtgaagga agtcctgcgc tctgaagaag tccggagcgc actgaaacag
      781 aaacttcgcc agaatcttga gtcgcgtctt gatgcagaag tggatgccat tctggatgag
      841 ctgctgggcg tagcagcggt tcctgagccg gaaggtatcg cgggtgacgg gagtgcttca
      901 gatggcggtg aacctacacc tgacagcgac atgatgatgt aagcatgcgc aagggaccat
      961 cggtgtgtgc cggtggtctt tatattgttg tgagcttccg gatt
//
LOCUS       DADMIB010000384         1001 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.397, whole genome shotgun sequence.
ACCESSION   DADMIB010000384 DADMIB010000000
VERSION     DADMIB010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1001
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.397"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..405)
                     /locus_tag="JNZ89_004605"
     CDS             complement(<1..405)
                     /locus_tag="JNZ89_004605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY8938210.1"
                     /translation="MKRLQAFKFQLRPGGQQEREMRRFAGACRFVFNRALARQNENHE
                     VGNKYIPYGKMASWLVEWKNATETQWLKDAPSQPLQQSLKDLERAYKNFFQNRAAFPR
                     FKKRGQNDVFRYPQGVKLDQENSRIFLPKLGWM"
     gene            413..781
                     /gene="tnpA"
                     /locus_tag="JNZ89_004606"
     CDS             413..781
                     /gene="tnpA"
                     /locus_tag="JNZ89_004606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HAY8938211.1"
                     /translation="MILWSVKKETDIRRGRHCVFLMHVHLVFVTKYRRQIFDHDATEK
                     LRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAISSLVNSLKGVLWSPGYFASS
                     CGGAPISVIRQYIEQQQTPG"
BASE COUNT          266 a          249 c          216 g          270 t
ORIGIN      
        1 catccagccc agtttcggca gaaaaatacg gctgttttcc tgatcgagct taacgccctg
       61 cgggtagcgg aatacatcat tctgtccccg ctttttgaat cggggaaaag cagcccgatt
      121 ctggaagaag tttttgtaag cccgctcaag gtctttcagt gactgttgca atggctgtga
      181 cggggcatct ttaagccatt gcgtttcagt ggcatttttc cactcaacca gccaggaagc
      241 cattttcccg taagggatgt atttattacc gacctcatga ttctcattct gacgtgccag
      301 agcacgattg aaaacgaaac gacatgcgcc tgcgaagcgc ctcatttcac gctcctgttg
      361 accaccgggt cttaactgga atttaaatgc ttgtagtcgt ttcacaggcc aaatgatact
      421 ttggtctgtg aaaaaagaaa ccgatatccg gcgtggaagg cattgtgttt tcctgatgca
      481 tgttcacctg gtctttgtca ccaaataccg acgtcagatt tttgaccatg acgcgacaga
      541 aaaactacgc acttactttt caaatgtatg tgctgatttt gaagctgaac tggttgaaat
      601 ggatggcgaa ccagatcacg tccatttgtt aattaactat cctcccaaac tggcaatatc
      661 cagtctggta aacagcctca aaggcgtttt gtggagtcct ggctattttg ccagtagctg
      721 cggaggtgcg ccaatatccg tcatccgcca atacattgaa caacagcaaa cacctggtta
      781 ggtggaaaac cacgccttat atccctgccc tgaaggacgg ggttttacgg cgcaccggat
      841 aagcctggag attatctaca ccagcatgga catcattgta ctatgccccg tacatgcccc
      901 atcacatcct caacatcaaa gtattagagc cttgcaaacc attatgcgtc tcagtttgtc
      961 tcatctatct tacgcaaaaa aaaatagaac taatatcaag c
//
LOCUS       DADMIB010000385          999 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.398, whole genome shotgun sequence.
ACCESSION   DADMIB010000385 DADMIB010000000
VERSION     DADMIB010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.398"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(102..932)
                     /locus_tag="JNZ89_004607"
     CDS             complement(102..932)
                     /locus_tag="JNZ89_004607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-1"
                     /protein_id="HAY8938212.1"
                     /translation="MKNTIHINFAIFLIIANIIYSSASASTDISTVASPLFEGTEGCF
                     LLYDASTNAEIAQFNKAKCATQMAPDSTFKIALSLMAFDAEIIDQKTIFKWDKTPKGM
                     EIWNSNHTPKTWMQFSVVWVSQEITQKIGLNKIKNYLKDFDYGNQDFSGDKERNNGLT
                     EAWLESSLKISPEEQIQFLRKIINHNLPVKNSAIENTIENMYLQDLDNSTKLYGKTGA
                     GFTANRTLQNGWFEGFIISKSGHKYVFVSALTGNLGSNLTSSIKAKKNAITILNTLNL
                     "
BASE COUNT          258 a          168 c          199 g          374 t
ORIGIN      
        1 tttgaaataa ggggcgccga gcgccagcga ggggagccaa aagcttgctt ttggccgtcc
       61 cgacttgatt gaagggttgg gcgattttgc cattagattt tttataaatt tagtgtgttt
      121 agaatggtga tcgcattttt cttggctttt atgcttgatg ttaaattcga ccccaagttt
      181 cctgtaagtg cggacacaaa aacatattta tgtcctgatt tgcttataat aaacccttca
      241 aaccatccgt tttgtaaggt tctatttgct gtgaatcctg caccagtttt cccatacagt
      301 tttgtactat tatccagatc ttgtagatac atgttctcta tggtgttttc tatggctgag
      361 tttttaactg ggagattgtg attaataatt ttacgcagga attgaatttg ttcttctggt
      421 gaaattttta agctactttc gagccatgct tctgttaatc cgttgtttct ttctttatct
      481 ccagagaagt cttgatttcc ataatcaaaa tctttgagat aattcttgat tttatttaat
      541 ccaatttttt gggttatttc ttgcgaaacc caaacaacag aaaattgcat ccacgtcttt
      601 ggtgtatgat tgctgttcca gatctccatt cctttggggg ttttatccca tttgaatatg
      661 gttttctgat ctattatttc cgcatcaaat gccataagtg ataatgcgat cttgaaagtt
      721 gaatctggtg ccatttgcgt tgcacacttt gctttattga attgagcaat ttcagcgttt
      781 gtggatgcat cgtaaagtaa aaaacaacct tcagttcctt caaataatgg agatgcaaca
      841 gtagagatat ctgttgatgc actggcgctg ctgtagataa tatttgcaat tattaaaaaa
      901 atagcgaagt tgatatgtat tgtgtttttc ataataagta ttggtttggt aaagggctta
      961 attttaacgg ctaacaatta atgaggctcc gggttcgcc
//
LOCUS       DADMIB010000386          987 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.399, whole genome shotgun sequence.
ACCESSION   DADMIB010000386 DADMIB010000000
VERSION     DADMIB010000386.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.399"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>987
                     /locus_tag="JNZ89_004608"
     CDS             <1..>987
                     /locus_tag="JNZ89_004608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938213.1"
                     /translation="AAVQTLREMNADNLRKVPADAPTAFIKPRWKPLVITPEGLDRKF
                     YEICALSELKNALRSGDIWVKGSRQFRDFDDYLLPAEKFAALKREQALPLAINPNSDQ
                     YLEERLQLLDEQLATVTRLAKDNELPDAILTESGLKITPLDAAVPDRAQALIDQTSQL
                     LPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLSAILGDAINLGLTKMAESS
                     PGLTYAKLSWLQAWHIRDETYSAALAELVNHQYRHAFAAHWGDGTTSSSDGQRFRAGG
                     RGESTGHVNPKYGSEPGRLFYTHISDQYAPFSTRVVNVGVRDSTYVLDGLLY"
BASE COUNT          193 a          344 c          298 g          152 t
ORIGIN      
        1 ggcagccgtg cagaccctgc gtgagatgaa cgccgacaac ctgcgcaagg tgccggccga
       61 tgcacccacg gccttcatca agccgcgctg gaagccgctg gtgatcaccc cggaaggcct
      121 cgaccggaaa ttctacgaaa tctgcgccct gtccgagctg aagaacgccc tgcgctccgg
      181 cgacatctgg gtcaagggct cgcggcagtt ccgcgacttc gacgactacc tgctgccggc
      241 cgagaagttc gccgcactca agcgcgagca ggccctgccc ctggcgatca acccgaacag
      301 cgaccagtac ctggaagagc gtttgcagct gctggacgag cagttggcca ccgtcacccg
      361 cctggccaag gacaacgagc tgcccgatgc catcctcacc gagtcagggc tgaaaatcac
      421 cccgctggat gcggcggtgc cggatcgggc gcaggcgctg atcgaccaaa ccagccagtt
      481 actgccgcgc atcaagatca ccgaactgct gatggacgtg gacgactgga cgggcttcag
      541 ccgccacttc acccacttga aggacggggc cgaggccaaa gacaggacgt tgctgctgtc
      601 cgcaatcctc ggtgatgcga tcaacctcgg gctgaccaag atggccgagt cgagccccgg
      661 cctgacctac gccaagctgt cctggctgca agcctggcac atccgcgacg aaacctattc
      721 ggcggccttg gccgagctgg tcaaccacca gtatcgccac gcctttgccg cccactgggg
      781 cgacggcacg acctcatcct ccgatggcca gcgcttccgc gcgggtggcc ggggcgagag
      841 caccgggcac gtcaacccga agtacggtag cgagccggga cggctgttct atacccatat
      901 ctccgaccag tacgcgccgt tcagcacccg cgtggtgaat gtcggcgtcc gcgattccac
      961 ctatgtgctc gacggcctgc tgtacca
//
LOCUS       DADMIB010000387          944 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.400, whole genome shotgun sequence.
ACCESSION   DADMIB010000387 DADMIB010000000
VERSION     DADMIB010000387.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..944
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.400"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            98..736
                     /gene="ytfB"
                     /locus_tag="JNZ89_004609"
     CDS             98..736
                     /gene="ytfB"
                     /locus_tag="JNZ89_004609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YtfB"
                     /protein_id="HAY8938214.1"
                     /translation="MPGRFELKPTLEKVWHAPDNFRFMDPLPPMHRRGIIIAAIVLVV
                     GFLLPSDDTPNAPVVTREAQLDIQSQSQPPTEEQLRAQLVTPQNDPDQVAPVAPEPIQ
                     EGQPEEQPQTTQTQPFQPDSGIDNQWRSYRVEPGKTMAQLFRDHGLPATDVYAMAQVE
                     GAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFIRAR"
     gene            complement(720..>944)
                     /locus_tag="JNZ89_004610"
     CDS             complement(720..>944)
                     /locus_tag="JNZ89_004610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709992.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938215.1"
                     /translation="EGKKHNIFKPDIDPLQVNINIAALGGYYLINQHTLGLVYHISMV
                     SPQALEARRKVIKETILSWLLVDPSSTAHE"
BASE COUNT          252 a          240 c          250 g          202 t
ORIGIN      
        1 gtatgaatat aataaaggcg ggtttaccac ggacatcata gcgttagctt attcataggc
       61 tatgattgag gaacaagacg cggagcagga ggaaaccatg cccgggcgct ttgaactaaa
      121 accaaccctg gagaaagtct ggcacgcgcc ggacaatttt cgcttcatgg acccgctgcc
      181 gccgatgcat cgtcggggga tcattattgc cgccattgta ttggtggtcg gatttctgct
      241 tccatctgat gatacgccca acgcgccggt ggtgacgcgt gaagcgcagt tagatattca
      301 gtcgcaatca caaccgccga cagaagaaca gctgcgggcg caattagtca caccacaaaa
      361 tgatcctgat caggtggctc cggtcgctcc agaacctata caggaaggcc agccagaaga
      421 gcagccgcaa actacccaaa cgcaaccatt ccagccagat agcggaattg ataatcaatg
      481 gcgctcttac cgtgtcgaac ccggtaaaac gatggcgcag ctgttccgcg accacggact
      541 gcccgctacc gatgtctatg caatggcgca ggtagaaggc gcgggtaagc cgctgagtaa
      601 tttgcaaaac gggcagatgg tgaaaatccg ccagaacgcc agcggcgtgg tgacgggctt
      661 aaccattgat acggggaata atcaacaggt cctgttcacc cgccagccgg atggcagttt
      721 tattcgtgcg cggtagatga agggtcaacc aaaagccagc taaggattgt ctctttgatg
      781 accttacgtc tggcttccag tgcctggggg gaaaccatac tgatatgata aaccaggcca
      841 agcgtatgct ggttgatcaa ataatatccg ccaagcgcag caatattaat attcacctgc
      901 aatgggtcga tatctggctt aaaaatattg tgtttcttcc cttc
//
LOCUS       DADMIB010000388          942 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.401, whole genome shotgun sequence.
ACCESSION   DADMIB010000388 DADMIB010000000
VERSION     DADMIB010000388.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.401"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            6..566
                     /locus_tag="JNZ89_004611"
                     /pseudo
     CDS             6..566
                     /locus_tag="JNZ89_004611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001367725.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(612..688)
                     /locus_tag="JNZ89_004612"
     tRNA            complement(612..688)
                     /locus_tag="JNZ89_004612"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(652..654),aa:Arg,seq:tct)
BASE COUNT          261 a          227 c          216 g          238 t
ORIGIN      
        1 atctgttgtt tttaaataag aacttaacct gtgtaaagcc ctagtcgcgg ctggcaaccc
       61 cggttatcgc ttgtcatagc cgtacaccgg aagtgttccg gctagccgcc aaccacagca
      121 agcagcaacc cagcaaaccc tgcgaagcgg agttgacgcg cgcattactt tttaccgtat
      181 tgtctaactt tcttgagcaa tcgcggttta ttgccctact gatgtatatc ttacgcagca
      241 gcgtccgcga cagcgtctgc cgcattattc aaagcgatat tcagcattac tggaatctgc
      301 gaattgtcgc cagttcgcta tgtttaagcc ccagcctgct caaaaagaaa ttaaaaaacg
      361 aaaataccag ctatagccag attgtcacag agtgtcgtat gcgttacgcc gtacagatgt
      421 tattgatgga taacaaaaat atcactcagg tggcgcaatt atgtggctat agcagcacgt
      481 cgtactttat ctctgttttt aaggcgtttt acggcctgac accgttgaat tatctcgcca
      541 aacagcgaca aaaagtgatg tggtgaaggg caaagcggaa acggataaga cgggcataaa
      601 tgaagaagaa atggcgcgcc ctgcaggatt cgaacctgcg gcccacgact tagaaggtcg
      661 ttgctctatc caactgagct aagggcgcgt tgataccgca atgcggtgta atcgcgtgaa
      721 ttatacggtc aacccttgct gagtcaatgg cttttgatct ggttgctgaa caagtgaacg
      781 accgcgtctg attttctgat ttatttcgct atagcggcaa acaaacgcac accgctgcgc
      841 gtctgaatca agaaaacccg tattttcatg tatcaaagta caatttaccg ccctaacgga
      901 aaattgtccg ctcctatgag actggtaact atgaaaccaa cg
//
LOCUS       DADMIB010000389          940 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.402, whole genome shotgun sequence.
ACCESSION   DADMIB010000389 DADMIB010000000
VERSION     DADMIB010000389.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..940
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.402"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(416..718)
                     /gene="hicB"
                     /locus_tag="JNZ89_004613"
                     /pseudo
     CDS             complement(416..718)
                     /gene="hicB"
                     /locus_tag="JNZ89_004613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415955.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HicB"
     gene            complement(764..918)
                     /locus_tag="JNZ89_004614"
                     /pseudo
     CDS             complement(764..918)
                     /locus_tag="JNZ89_004614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415954.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="mRNA interferase"
BASE COUNT          279 a          204 c          191 g          266 t
ORIGIN      
        1 ggaaatggaa gccacgcaag caccttaaaa tcaccatcat acactaaatc agtaagttgg
       61 cagcattacc acatgcgtct tgaagttatt gaaccaaaat atgattctga atataaacac
      121 actcaatttg catgtgacat ggtagacgca gagtaagagg tgaaatgatg caattcaata
      181 gcatgaagat tactcaaaaa tggtgggatg cgatgaaagc taaccaccaa aacgatatta
      241 attaagtaac attttagata tacagcaccc agctaacagc tcacctttta tggatttcat
      301 tataacccct ttgatctgga aactatgtta attagttgat ttctaagcct tgtccttgtg
      361 atggggcttt ttattgcaaa atttttagtt attttgggtt gactacattc gggttgccaa
      421 ttcgcctggc taactcttgc tgagtgattt ctgactgtaa aaaagcattt aacagcaata
      481 ctttagaggc gacgctcaaa ggtacttcaa taaagtgatc atgactattt aatggcgaag
      541 gtaacgggat aagctcgtta tcttcaaaat aaaaatcaaa tgcggtcagt aaagcatctt
      601 ttgccgcttc catcgcttca gcgacagttt cgccctgcgt caacgcttca gggatatcca
      661 caaaagaaac catataaccg ccttccggcg cgggtgtaag agtgacggga taacgcataa
      721 tttcgactgt ctctcgcatg tcattaacct ttttaattgg cgattaactc aaaccgagtt
      781 gtttcaggat tgctttacgc aggagtgacg cggcatgaca ctgcgcctcc catgaaacct
      841 gagtttcaaa tggttgcggc cattcgctac atcgacgccc tgagattcga gccaacgtct
      901 gaactcgctt tgtttcacat cgcctccctg ccgctgagta
//
LOCUS       DADMIB010000390          930 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.403, whole genome shotgun sequence.
ACCESSION   DADMIB010000390 DADMIB010000000
VERSION     DADMIB010000390.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.403"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..897
                     /gene="lpxM"
                     /locus_tag="JNZ89_004615"
                     /gene_synonym="msbB"
     CDS             <1..897
                     /gene="lpxM"
                     /locus_tag="JNZ89_004615"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY8938216.1"
                     /translation="LSPVYWSTWFLLGMIAGISMFPPSFRDPVLAKIGRWAGRLSKKA
                     RRRATINLSLCFPEKSDTEREIIVYKMFVTALQSIVMMAELAIRGPEKFQKRVFWKGL
                     EILEEIRHNNRNVIFLVPHGWSVDIPAMLLAAQGKKMAAMFHQQRNPVIDYVWNSVRR
                     KFGGRLHAREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFADFFATYKATLPIIGRL
                     MNISQAMIIPLFPVYDEKKHLLTIEIRPPMDACIASADNKTIARQMNKTVEILVGPHP
                     EQYVWVLKLLKTRKSNEADPYP"
BASE COUNT          274 a          185 c          217 g          254 t
ORIGIN      
        1 ctttcccctg tttactggtc tacatggttc cttttgggaa tgattgcagg tatttcaatg
       61 tttccccctt cattcagaga tcctgtcttg gcaaaaatag ggcgttgggc gggcagattg
      121 agcaaaaaag ctcgtcgcag ggcgacgatt aatttatcgc tttgtttccc agaaaagagt
      181 gatacagaac gggaaataat tgtctacaaa atgtttgtca cagcattgca atccatagtg
      241 atgatggcag aactggcaat tcgtggtccg gaaaagttcc agaaacgagt gttctggaaa
      301 ggcctcgaaa ttcttgagga aattcgacac aataatagaa atgtgatttt tctggttccc
      361 catggctgga gcgtggatat tcctgcaatg ttgctggcag ctcagggaaa aaaaatggcc
      421 gccatgtttc atcagcaacg aaatccagtg attgattatg tctggaattc agtacggcgt
      481 aaattcgggg ggcgcttaca tgcccgggag gatgggataa aaccatttat tcagtcagta
      541 cgccagggat actggggata ttacctccca gatcaggatc atggtcctga atacagtgaa
      601 tttgctgatt tttttgcgac ctataaagcg acattaccaa tcattggacg tctgatgaac
      661 atcagtcagg ctatgattat accacttttc ccggtttatg atgaaaaaaa acatctactg
      721 actattgaaa ttcggccacc aatggatgct tgcattgcca gcgcggacaa taaaacgatt
      781 gcccgacaaa tgaacaaaac agtggaaatt ttggtggggc cacatccgga acagtatgtc
      841 tgggttttaa aattgttaaa aacacgcaaa tcaaacgaag cggacccgta cccttgaaat
      901 tataaagtac aagtatttcc actagttgtt
//
LOCUS       DADMIB010000391          921 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.404, whole genome shotgun sequence.
ACCESSION   DADMIB010000391 DADMIB010000000
VERSION     DADMIB010000391.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.404"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>921)
                     /locus_tag="JNZ89_004616"
     CDS             complement(<1..>921)
                     /locus_tag="JNZ89_004616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HAY8938217.1"
                     /translation="RFSYGITGGNVFFSCLVFVFFYFAILMTVSADMPLVGCVLTLSL
                     LVLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFIST
                     KMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDT
                     AYCIKYAILAFLALLPFLAVAGYIIFEQILNAYDSSVYANDDIENLQQFMEMQRKMII
                     AQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISG
                     ITGGLAYPLLKIWMIDWQAKNTYLLGDLDDL"
BASE COUNT          354 a          207 c          141 g          219 t
ORIGIN      
        1 aaggtcatcc aaatcgccca gcaaatacgt attttttgcc tgccagtcaa tcatccatat
       61 tttcagcagt ggataagcca gaccgcccgt aatcccggat atcactacca acgcacacat
      121 gcgataaagc ataccgtggt acgttaaagt tgagcgaaaa cgaatacgcc catcattcag
      181 tgacaggtta ctcataaaat gatttcgcaa cgacaccgtt aaataactgg tgctaacagc
      241 aatcccaaaa taatagatta actgcgcgat tatcatttta cgttgcattt ccataaattg
      301 ctgtaaattc tcaatatcat catttgcata cacagaacta tcatacgcat ttaatatttg
      361 ttcgaagata atataaccag caacagcgag aaaaggtaat aaagctaaaa atgcgaggat
      421 ggcatatttt atacaatacg cagtatctaa tttcaccttg aaacgatgta taccgaaact
      481 ggtattgctc cagagaaaac tcattaccag gctatataaa gtaccattaa aaataccaat
      541 ggaaacaata ccaactattg ccatcagaac cacagatata ataacactac ttgaactatt
      601 ggcatgtagc atctttgtcg agataaagaa aacagtcccc atcccaatgg ccattaaaat
      661 cggcaagaaa aaggttaccc accagaaccc tttcatagag caattaaaac taaatcttac
      721 gccgttgaga ctagtcatca aggcctgata acgcagtcct tttgctgcca taaatataag
      781 caaaaccaac agtgacaaag tcaaaacaca gccaacaagc ggcatatctg ctgacactgt
      841 cattaagatt gcgaaataga aaaaaacaaa aacaagacaa ctaaaaaaaa cattcccacc
      901 agtaattcca taagaaaatc g
//
LOCUS       DADMIB010000392          914 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.405, whole genome shotgun sequence.
ACCESSION   DADMIB010000392 DADMIB010000000
VERSION     DADMIB010000392.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.405"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>914
                     /gene="tuf"
                     /locus_tag="JNZ89_004617"
     CDS             <1..>914
                     /gene="tuf"
                     /locus_tag="JNZ89_004617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY8938218.1"
                     /translation="AHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHIL
                     LGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKAL
                     EGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGII
                     KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAK
                     PGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMP
                     GDNIKMVVTLIHPIAMDDGLRFAIREGGR"
BASE COUNT          212 a          230 c          264 g          208 t
ORIGIN      
        1 gcacacgtag actgcccggg gcacgccgac tatgttaaaa acatgatcac cggtgctgct
       61 cagatggacg gcgcgatcct ggtagttgct gcgactgacg gcccgatgcc gcagactcgt
      121 gagcacatcc tgctgggtcg tcaggtaggc gttccgtaca tcatcgtgtt cctgaacaaa
      181 tgcgacatgg ttgatgacga agagctgctg gaactggttg aaatggaagt tcgtgaactt
      241 ctgtctcagt acgacttccc gggcgacgac actccgatcg ttcgtggttc tgctctgaaa
      301 gcgctggaag gcgacgcaga gtgggaagcg aaaatcctgg aactggctgg cttcctggat
      361 tcttacattc cggaaccaga gcgtgcgatt gacaagccgt tcctgctgcc gatcgaagac
      421 gtattctcca tctccggtcg tggtaccgtt gttaccggtc gtgtagaacg cggtatcatc
      481 aaagttggtg aagaagttga aatcgttggt atcaaagaga ctcagaagtc tacctgtact
      541 ggcgttgaaa tgttccgcaa actgctggac gaaggccgtg ctggtgagaa cgtaggtgtt
      601 ctgctgcgtg gtatcaaacg tgaagaaatc gaacgtggtc aggtactggc taagccgggc
      661 accatcaagc cgcacaccaa gttcgaatct gaagtgtaca ttctgtccaa agatgaaggc
      721 ggccgtcata ctccgttctt caaaggctac cgtccgcagt tctacttccg tactactgac
      781 gtgactggta ccatcgaact gccggaaggc gtagagatgg taatgccggg cgacaacatc
      841 aaaatggttg ttaccctgat ccacccgatc gcgatggacg acggtctgcg tttcgcaatc
      901 cgtgaaggcg gccg
//
LOCUS       DADMIB010000393          908 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.406, whole genome shotgun sequence.
ACCESSION   DADMIB010000393 DADMIB010000000
VERSION     DADMIB010000393.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.406"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>908)
                     /locus_tag="JNZ89_004618"
     CDS             complement(<1..>908)
                     /locus_tag="JNZ89_004618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8938219.1"
                     /translation="AFLTGIAGALQTPTLSIFLADELKARPIMVGFFFTGSAIMGILV
                     SQFLARHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFASTANPQ
                     MFALAREHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAIAF
                     VVCGLIVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINM
                     PLFIIDELHLTDKLAGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYA
                     SVLMATTPAVELELQILNAIFLGILC"
BASE COUNT          280 a          213 c          213 g          202 t
ORIGIN      
        1 cacagagaat accaaggaag atggcattta gaatttgcaa ttccagctca accgccggag
       61 tcgtcgccat gagtacgctg gcgtaaaaac acataccact cacgatagca atgagcatta
      121 atagtcgctt gccaatacgt ttcatgtaat agcctgcgat taacatcatc ggaatttcca
      181 gaccggcagc gataccaatc atttctccag ccagtttatc ggttagatgc agttcatcaa
      241 taataaatag cggcatattt atcatgtaga gattattcgc cgcccacatc attgaacaga
      301 ccacaaaaag tagccgcgta tcccgcttcc tatgggtgga gggtaaaatt tctacgggtt
      361 gggtaacgac aggaatattt ctttgtattg atggcaaaaa caaccagact atcagcccgc
      421 aaacaacaaa tgcgatggca gcggtgagat acatcacttt aaaactaaac cccattgcca
      481 gttcataagc gagcggtggc ccgataaccc aggcaagcga gatctgagca cgtaaaaatg
      541 tactgaacat gaccgtctca cggcctgttc tgtcggcgtg ttcacgggcg agggcgaaca
      601 tttgcgggtt tgcggtagaa gcaaaactac tcagaagtac gcccgtagag aggagaatga
      661 agtagttgcg attccacgca aaaagcgtgc aggccagcac tccaaataag caacatagca
      721 gaatcagtaa tttacggtcg ccttgtttat cggagtgcct tgccagaaat tgactgacca
      781 gaattcccat aatagcgcta ccggtgaaga aaaaacctac cattatagga cgggctttca
      841 gttcatctgc gaggaatata cttagggtag gagtctgaag agcgcccgca atacccgtca
      901 gaaaggcg
//
LOCUS       DADMIB010000394          898 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.407, whole genome shotgun sequence.
ACCESSION   DADMIB010000394 DADMIB010000000
VERSION     DADMIB010000394.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.407"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..258
                     /locus_tag="JNZ89_004619"
     CDS             <1..258
                     /locus_tag="JNZ89_004619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938220.1"
                     /translation="RALRNELKNNGIKAVIPRKSNEKMASDGRAQLDRDAYCNRNVVE
                     RCFGRLKEYRRIATRYDKTARNYLAMVKLGCIRLFYQRLRN"
     gene            373..>898
                     /locus_tag="JNZ89_004620"
     CDS             373..>898
                     /locus_tag="JNZ89_004620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630-like element IS630 family transposase"
                     /protein_id="HAY8938221.1"
                     /translation="MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVS
                     DVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLRELVKHSPGD
                     FGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEK
                     MAAIHKALDECSAEH"
BASE COUNT          241 a          230 c          239 g          188 t
ORIGIN      
        1 cgcgcattgc gcaacgagct gaaaaataac ggtataaagg cagtaatccc ccgaaagtca
       61 aatgagaaaa tggcatcgga tggacgtgca cagcttgatc gtgatgcgta ctgcaatcgt
      121 aatgtcgttg aacggtgctt tgggcggctg aaagaatatc gccgcatcgc cacgcgttac
      181 gacaaaacgg cgagaaatta cctggcgatg gtgaaactgg gctgcatccg actcttttat
      241 caacgcttac gtaattaagg gacacagcct aaatagctgc gcggaatagt agatcccttt
      301 gagggaactt agcccggatt gtgcgatctg atcaatcgcc aaatcaaaac aaatcaccaa
      361 ccggactgag caatgccgat catagcacca atttcccgtg acgaacgacg cctgatgcag
      421 aaagccatcc ataaaacaca cgataaaaat tatgcccgca gactgactgc catgctgatg
      481 ctgcaccggg gcgaccgtgt cagcgacgtt gccagaacgc tctgctgcgc ccgttcctct
      541 gttggacgct ggattaactg gttcacgcag tcgggtgttg agggactgaa atcattacct
      601 gccgggcgtg cccgtcgctg gccgtttgag catatctgca cactgttacg tgagctggta
      661 aaacattctc ccggcgactt tggctaccag cgttcacgct ggagtacaga actgctggca
      721 ataaaaatca atgagataac cggttgccag ttaaatgccg gaaccgttcg ccgctggttg
      781 ccgtctgcgg ggattgtgtg gcgaagggct gcgccaactc tgcgtatccg tgacccgcat
      841 aaagatgaaa agatggcagc aatccataaa gcactggacg aatgcagcgc agagcatc
//
LOCUS       DADMIB010000395          866 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.408, whole genome shotgun sequence.
ACCESSION   DADMIB010000395 DADMIB010000000
VERSION     DADMIB010000395.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..866
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.408"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..842
                     /locus_tag="JNZ89_004621"
     CDS             <1..842
                     /locus_tag="JNZ89_004621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY8938222.1"
                     /translation="LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC
                     IGVEILLRWNNPRQGRISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHV
                     GINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVK
                     LAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIEL
                     VAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIM
                     PLR"
BASE COUNT          200 a          220 c          222 g          224 t
ORIGIN      
        1 tactggtggg ctacatcgcc tggctggcga ccgcttaccg gatgagcttt tcccgcgaaa
       61 tcaatctggg cctggcgcaa catgagttcg aattgttctg tcagcctttg cttaatgcgc
      121 gcagccagca atgtattggt gtagagattt tgctgcgctg gaacaatccg cgtcagggcc
      181 ggatttcacc ggatgtgttt attcctatcg cggaagaaca tcatttaatt gtgccactga
      241 cccgctatgt gatggcagaa accattcgtc agcgccatgt tttcccgatg agtagtcagt
      301 ttcatgttgg cattaacgtc gcacccagcc attttcgccg tggtgtgctg ataaaagatc
      361 tcaatcagta ctggtttagc gctcacccga ttcagcaact gatcctcgaa atcaccgaac
      421 gcgatgcctt actggatgtt gattatcgga ttgcccgcga gctacatcgt aaaaacgtca
      481 aactggcgat tgatgacttc ggcaccggca acagttcatt ttcctggctt gaaacattac
      541 gtcctgacgt gctgaaaatt gataagtcat ttaccgcagc tataggttct gacgcggtta
      601 actcgacggt gaccgatatc atcatcgcgc tggggcaaag actgaatatt gaactggtgg
      661 cggagggcgt ggaaacgcaa gaacaggcga agtatttgcg ccgtcatggc gtgcatattt
      721 tgcaagggta tttgtacgca cagccgatgc cgctacgcga ttttcccaaa tggctggcgg
      781 gcagccaacc gccgcccgcc cggcataatg gacatatcac gcccattatg ccgttacgtt
      841 aacgctgata tgactttccg tgtcaa
//
LOCUS       DADMIB010000396          864 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.409, whole genome shotgun sequence.
ACCESSION   DADMIB010000396 DADMIB010000000
VERSION     DADMIB010000396.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.409"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..853
                     /locus_tag="JNZ89_004622"
     rRNA            <1..853
                     /locus_tag="JNZ89_004622"
                     /product="16S ribosomal RNA"
BASE COUNT          215 a          206 c          266 g          177 t
ORIGIN      
        1 agagatctgg aggaataccg gtggcgaagg cggccccctg gacgaagact gacgctcagg
       61 tgcgaaagcg tggggagcaa acaggattag ataccctggt agtccacgcc gtaaacgatg
      121 tcgacttgga ggttgtgccc ttgaggcgtg gcttccggag ctaacgcgtt aagtcgaccg
      181 cctggggagt acggccgcaa ggttaaaact caaatgaatt gacgggggcc cgcacaagcg
      241 gtggagcatg tggtttaatt cgatgcaacg cgaagaacct tacctggtct tgacatccac
      301 ggaagttttc agagatgaga atgtgccttc gggaaccgtg agacaggtgc tgcatggctg
      361 tcgtcagctc gtgttgtgaa atgttgggtt aagtcccgca acgagcgcaa cccttatcct
      421 ttgttgccag cggtccggcc gggaactcaa aggagactgc cagtgataaa ctggaggaag
      481 gtggggacga cgtcaagtca tcatggccct tacgaccagg gctacacacg tgctacaatg
      541 gcgcatacaa agagaagcga cctcgcgaga gcaagcggac ctcataaagt gcgtcgtagt
      601 ccggattgga gtctgcaact cgactccatg aagtcggaat cgctagtaat cgtggatcag
      661 aatgccacgg tgaatacgtt cccgggcctt gtacacaccg cccgtcacac catgggagtg
      721 ggttgcaaaa gaagtaggta gcttaacctt cgggagggcg cttaccactt tgtgattcat
      781 gactggggtg aagtcgtaac aaggtaaccg taggggaacc tgcggttgga tcacctcctt
      841 accttaaaga agcgtacttt gcag
//
LOCUS       DADMIB010000397          859 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.411, whole genome shotgun sequence.
ACCESSION   DADMIB010000397 DADMIB010000000
VERSION     DADMIB010000397.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.411"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(48..>859)
                     /locus_tag="JNZ89_004623"
     CDS             complement(48..>859)
                     /locus_tag="JNZ89_004623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938223.1"
                     /translation="MSLSRDDVDVYSRDFSRTSQMNTNSVDVRYRNIPLWDDATLSLM
                     AKYSAPNKTDQQQDNENDNSYFEMKDSWMLTSVLRQNLQRDTFNEFTLQVANNSYASS
                     FASFSDASNTMAHGRYYYGDHTNGIAWRLISQGEMYLTDNIIMANALVYSHGEDVYSY
                     ESGAHSDFDSIRTVIRPAWIWNTWNQTGLELGWFKQQNKTQQGVTLNESAYKTTLWHA
                     LKVGESILGSRPEIRFYGTYINILDNELSNFKFNENSKDEFMAGIQAEVWW"
BASE COUNT          256 a          194 c          152 g          257 t
ORIGIN      
        1 aaaccttttt taaatcctga catacacaac tccttaacta aaatagatta ccaccagact
       61 tccgcctgga tgccggccat aaactcgtct ttgctgttct cattaaactt aaaattcgat
      121 aattcgttat ccagaatatt gatatacgtt ccatagaagc gaatttctgg tcgtgaacct
      181 aaaatgcttt cacccacttt caatgcatgc cagagtgtcg ttttataagc cgattcattt
      241 agtgttacac cctgctgagt tttgttctgt tgcttaaacc agcctaattc aagccccgtc
      301 tgattccatg tattccagat ccaggccggt cttattacag tgcgaatact gtcaaaatca
      361 ctatgagcac cactttcata actataaaca tcttcgccgt gagaatagac aagcgcgtta
      421 gccataataa tattgtcagt aagatacatc tcgccctgag agattaaacg ccaggcgatc
      481 ccattggtat gatcaccata gtaatagcga ccatgcgcca tcgtattact ggcatctgag
      541 aaactggcaa aactgctggc ataggaatta ttggcaacct gtaacgtaaa ttcattaaac
      601 gtatcgcgtt gcaggttttg ccgtaaaaca gaagtcagca tccagctatc tttcatttca
      661 aaataactgt tgtcattttc gttatcttgt tgttgatccg ttttattagg tgcggaatat
      721 ttagccatta atgataatgt cgcatcatcc cataacggga tattgcgata acgaacatcc
      781 acagaattgg tattcatctg gctggtacgc gaaaaatcac gagagtaaac atcgacatca
      841 tcacggctta aggacatat
//
LOCUS       DADMIB010000398          822 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.413, whole genome shotgun sequence.
ACCESSION   DADMIB010000398 DADMIB010000000
VERSION     DADMIB010000398.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..822
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.413"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            6..797
                     /gene="fdrA"
                     /locus_tag="JNZ89_004624"
                     /pseudo
     CDS             6..797
                     /gene="fdrA"
                     /locus_tag="JNZ89_004624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308607.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
BASE COUNT          197 a          192 c          251 g          182 t
ORIGIN      
        1 ttgttatgat ccacgccttt attaaaaaag ggtgttttca ggattcggtc agtttaatga
       61 ttatttcacg aaaactcagc gaatcagaaa atgttgatga tgtttccgta atgatgggta
      121 cgcccgccaa taaagcgtta ttagatacca caggtttctg gcatgacgat tttaataacg
      181 ccacgccgaa cgatatttgc gtggcaattc gtagcgaagc ggcggatgcg gggatcgcgc
      241 aggcgattat gcagcagctt gaagaggcgc taaaacaact ggcgcagggg gcaggcagca
      301 gccagtcctt gacgcaggtg cgtcgctggg acagtgcctg tcagaaatta tccgatgcca
      361 atctggcgct gatttcagtg gctggcgagt atgcggcgga gctggcgaat caggcgctgg
      421 agcgcaacct caacgtgatg atgttctccg ataacgtcac gctggaagat gaaatccaac
      481 ttaaaacccg cgcgcgagaa aaaggcttgc tggtgatggg gccggactgc ggtacgtcga
      541 tgattgccgg cacgccgctg gcttttgcta acgtgatgcc ggaaggcaac attggcgtca
      601 ttggcgcttc cggtaccggg attcaggaac tgtgttcgca gattgcgcag gcaggggagg
      661 gaattactca cgcgattggt cttggcgagc gcgacctcag ccgtgaagta ggcggcatca
      721 gtgcgctgac ggcgctggaa atgctcagtg cagacgagaa aagcgaagtg ctggcatttg
      781 tttcaaagcc acctgcctag actggccccc tgaatctcca ga
//
LOCUS       DADMIB010000399          816 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.414, whole genome shotgun sequence.
ACCESSION   DADMIB010000399 DADMIB010000000
VERSION     DADMIB010000399.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.414"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            122..816
                     /locus_tag="JNZ89_004625"
                     /pseudo
     CDS             122..816
                     /locus_tag="JNZ89_004625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416847.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          311 a          146 c          134 g          225 t
ORIGIN      
        1 ggctattgtg cgctcataca ctcaaattaa agataggttc taaataaatg agcgtttttt
       61 gatagtctat ttcattaggt aatatatatt tgtaacaaat caatcaaaat ggaataaaat
      121 catgctacca tctatttcaa tcaacaatac cagcgcaact tacccagaat ccattaatga
      181 aaataacaat gatgaagtta atggattagt acaagagctc aaaaaccttt ttaatggtaa
      241 ggaataagca cctgtattaa acatctactt gagcttataa aaaacgccat acgagtaaac
      301 gacgatcctt atagatttaa tattaataat tcctcagtta cttatattga tattggctcc
      361 aatgatacag accatattac tattggtatc gacaaccaag aaccaataga attacctgcg
      421 aactataaag acaaagaact cgtccgtact atcattaatg acaacatagt tgagaagact
      481 catgatatca ataacaagga aatgatcttc agcgcattaa aagaaatata tgatggagct
      541 cctagtttta tcttcgataa gatatcacac aaactcagac atacggtaac ggaatttgat
      601 gagagcggga aaagcgaacc aacggactta tttacctggt acggtaaaga taaaaaaggc
      661 gactctctcg ctattgtaat taaaaataaa aacggaaatg attacttatc cctcggttac
      721 tacgatcagg acgactacca cattcaaaga ggaattcgta ttaatggtga tagtctcacc
      781 caatattgta gtgaaaacgc caggagtgct tcagcg
//
LOCUS       DADMIB010000400          811 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.415, whole genome shotgun sequence.
ACCESSION   DADMIB010000400 DADMIB010000000
VERSION     DADMIB010000400.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..811
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.415"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..346
                     /locus_tag="JNZ89_004626"
     CDS             <1..346
                     /locus_tag="JNZ89_004626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938224.1"
                     /translation="VMCLTKPAFSYYIAAYLKLFIENYYEADALVDTILNMLTPPVRN
                     GIPSTTWIAKNLDCFSRNKRVAISFTFQYLCNEYNDPNTEKALNIYWGQYLNESLLIK
                     NVQNSKNKCKSQ"
     gene            complement(407..592)
                     /locus_tag="JNZ89_004627"
     CDS             complement(407..592)
                     /locus_tag="JNZ89_004627"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938225.1"
                     /translation="MIMVAVAAAVTDALLVFFRQLAPFVVLPALGIFIIHGTVRQAVG
                     FIVMPERDQALMSLTVI"
     gene            591..794
                     /locus_tag="JNZ89_004628"
     CDS             591..794
                     /locus_tag="JNZ89_004628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000977355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HAY8938226.1"
                     /translation="MMKNQMEPEYTPLRKIHLYHCDHRGLPLALIRSDGRTGWRVEYD
                     EWGNLLSEDNPHRERSSEVHFLY"
BASE COUNT          251 a          169 c          188 g          203 t
ORIGIN      
        1 tgtcatgtgt ctcactaaac cagcattctc atattatatt gcagcctatt taaaactttt
       61 tattgaaaat tattacgaag ctgatgcttt agtggatact attttaaata tgctcactcc
      121 tcctgttagg aatggtatcc ccagcactac atggatagca aaaaatcttg attgctttag
      181 tcgtaataaa agggtggcta tttcttttac attccaatat ttatgtaatg aatataatga
      241 tccaaatact gaaaaggcgt taaatatata ttggggacag tatctgaatg aatcattgct
      301 tattaaaaat gtacagaact ctaaaaataa atgtaaatca cagtaagaca gaaccaagca
      361 gaaatcgtgg gcgtggttcg caccctgacg gagggtgtag cgtgtactag atcacagtga
      421 gcgacatcaa agcttggtca cgttctggca ttacgatgaa gccgaccgcc tgacgcaccg
      481 taccgtgaat gatgaagatg ccgagtgctg gcagtacaac gaacggggct agctgacgga
      541 aaaagacgag cagcgcatcc gtgacggcgg cagccacagc caccattatc atgatgaaaa
      601 accagatgga gccggaatac acgccgctgc gtaaaattca cctgtaccac tgcgaccacc
      661 ggggactgcc gctggcgctg atacgcagtg acggccgaac cggatggcgt gtagagtatg
      721 acgaatgggg caacctgctg agtgaggata acccgcacag ggaaagatca tcagaagttc
      781 actttttgta ctaaataatt cgcattttat g
//
LOCUS       DADMIB010000401          809 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.416, whole genome shotgun sequence.
ACCESSION   DADMIB010000401 DADMIB010000000
VERSION     DADMIB010000401.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..809
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.416"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            23..809
                     /locus_tag="JNZ89_004629"
                     /pseudo
     CDS             23..809
                     /locus_tag="JNZ89_004629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
BASE COUNT          233 a          191 c          200 g          185 t
ORIGIN      
        1 cgcaggacga agtgggcgtc gtgtgcgtaa acaattcgcc accaaaggcg aagcactggc
       61 ttttgagcgc cacacgatgg aagaaaccga agcaaagccc tggctgggtg aatcagtgga
      121 tcgtcgaaca ctgaaagacg tggttgagct atggttcaaa ctacatggta aatctctgac
      181 agctgggcag catgtctatg acaaattgct gttgatggtt gacgctctgg gcaatcctct
      241 tgcaaccgat ctcacctcta aaatgtttgc ccactatcga gataaacgcc tgacaggcgg
      301 gatctacttc agcgagaaat ggaagaaagg agcaagcccg gtcaccatta acctggagca
      361 aagctatcta agtagtgttt ttagcgaact atcccgtctg ggcgaatggt cgtatccgaa
      421 cccactggag aacatgcgaa aattcaccat cgcagaaaaa gagatggcat ggcttaccca
      481 tgagcagatt gttgaattgc tggctgattg caaacgtcag gacccaattc tggcactggt
      541 agttaagata tgcttaagca caggcgcacg ctagcgtgaa gccgtaaatc ttacccgctc
      601 acaggtgacc aaataccgaa ttacctttgt cagaacgaag gggaagaaaa acagaagcat
      661 ccctatcagt aaagagcttt acgaagagat catggcgctt gatgggttca atttcttcac
      721 agactgctat tttcaatttt tatccgtgat ggaaaaaacg tctatcgtgc tccctcgcgg
      781 tcaactcaca cacgttctgc gccatacgt
//
LOCUS       DADMIB010000402          805 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.417, whole genome shotgun sequence.
ACCESSION   DADMIB010000402 DADMIB010000000
VERSION     DADMIB010000402.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.417"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(71..805)
                     /gene="ecpD"
                     /locus_tag="JNZ89_004630"
                     /pseudo
     CDS             complement(71..805)
                     /gene="ecpD"
                     /locus_tag="JNZ89_004630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414824.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial adhesin EcpD"
BASE COUNT          187 a          206 c          210 g          202 t
ORIGIN      
        1 ccccccaaac gaatcggaaa atcgatactg gaaaaactct aactcggtgg ccagtttttg
       61 ttgaccactt catcccgagg ttcaccatct gcttaaagaa gttgctcgag aagaaaacat
      121 agatcgagtc tgcgctcttc atctcgttga aggtgtagta ataggcggta ttgctcaccg
      181 gtttccatga actgccattc agactgaact gcatatcgta cgccccgacg gccgaggcta
      241 acgacgagtt ggcgatcgcc gggaatatat ggattgaggt gttgctgagt ccgtttgttt
      301 gcagggtata gttgaccatc ttacaactta atcctgaaag gctgccgatg gtctgtgtcc
      361 ggcagtcggc gttcccttcg cccagggtcg gcaccccgtc gctgttgata aatacctccg
      421 ccagcgagtg ggtatttatt aaccgaagat ttgctgcttt cgtatgggtg acattgcgaa
      481 cataccagtt gccggaggcc tgatccttac aacgcgcgcc gctgctggcg tcatagttca
      541 cagaggtctg acaggcattg atggtcattg taaagctgct gccgacgggc atttgttgca
      601 tatactggta aaacgcgtct gacaacatgc cgtgcatcca cttcgcgccg ccgctggtca
      661 ccgtcgcgcc ataaaatcca ctggcgtcgg tggtttgcgg caggataaga ctggtggtca
      721 tattacaccc tgcgtaccag ttgatgcagc gtaagccagt taaaggagat gaaaccggcg
      781 aattttccag ccacatatca aactt
//
LOCUS       DADMIB010000403          786 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.418, whole genome shotgun sequence.
ACCESSION   DADMIB010000403 DADMIB010000000
VERSION     DADMIB010000403.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 786)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.418"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..186)
                     /locus_tag="JNZ89_004631"
     CDS             complement(<1..186)
                     /locus_tag="JNZ89_004631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY8938227.1"
                     /translation="MKSMDKISTGIAYGTSAGSAGYWFLQWLDQVSPSQWAAIGVLGS
                     LLLGLLTYLTNLYFKIRE"
     gene            complement(479..553)
                     /locus_tag="JNZ89_004632"
     tRNA            complement(479..553)
                     /locus_tag="JNZ89_004632"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(518..520),aa:Gly,seq:tcc)
     gene            complement(557..632)
                     /locus_tag="JNZ89_004633"
     tRNA            complement(557..632)
                     /locus_tag="JNZ89_004633"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(597..599),aa:Thr,seq:tgt)
     gene            complement(635..711)
                     /locus_tag="JNZ89_004634"
     tRNA            complement(635..711)
                     /locus_tag="JNZ89_004634"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(675..677),aa:Arg,seq:tct)
BASE COUNT          227 a          199 c          189 g          171 t
ORIGIN      
        1 ttctcttatt ttgaaataca gattcgtcag ataagtcaga agccccagaa gcagacttcc
       61 cagcacacca atcgcagccc actgtgatgg actgacctga tccaaccact gcaaaaacca
      121 gtagccggca ctgccggcgg aggtgccgta ggcaatgccc gttgaaattt tgtccatgga
      181 tttcatagcc tcacctccgc aaataacgga tggcgtagtt ttacactgag aaatgaaagg
      241 gatttgaaaa gaaaaaaacg caaaagcggg cgaaacgata tatacagtaa ggaaagcact
      301 ctatccaaca aaccacccac agttaatcgg aataaaagca gagtgcttat gaatgatcgc
      361 acgcccgaag gttagtattt ctgcacagca attttgcaaa aaaaggcgat cattcataac
      421 ttaaacgtct ttcagtcact ccgggatttc ccatcatcgc agactgaaag actctgactg
      481 gagcgggcag cgggaatcga acccgcatca tcagcttgga aggctgaggt aatagccatt
      541 atacgatgcc cgcatatggt gccgactacc ggaatcgaac tggtgaccta ctgattacaa
      601 gtcagttgct ctgcctgctg agctaagtcg gcgctggccc accaccgagg actcgaacct
      661 cgcaccgtca acttagaagg ttgatgctct atccggatga gctagtggtg gttggtggcc
      721 cttgctggac ttgaaccagc gacctggcga ttatgagtcg ctcgctctga ccaactgagc
      781 taaagg
//
LOCUS       DADMIB010000404          778 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.419, whole genome shotgun sequence.
ACCESSION   DADMIB010000404 DADMIB010000000
VERSION     DADMIB010000404.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.419"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(32..736)
                     /locus_tag="JNZ89_004635"
     CDS             complement(32..736)
                     /locus_tag="JNZ89_004635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HAY8938228.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
BASE COUNT          178 a          208 c          200 g          192 t
ORIGIN      
        1 atgaggcagc cttttgtctt attcaaaggc cttacatttc aaaaactctg cttaccaggc
       61 gcatttcgcc caggggatca ccataataaa atgctgaggc ctggcctttg cgtagtgcac
      121 gcatcacctc aatacctttg atggtggcgt aagccgtctt catggattta aatcccagcg
      181 tggcgccgat tatccgtttc agtttgccat gatcgcattc aatcacgttg ttccggtact
      241 taatctgtcg gtgttcaacg tcagacgggc accggccttc gcgtttgagc agagcaagcg
      301 cgcgaccata ggcgggcgct ttatccgtgt tgatgaatcg cgggatctgc cacttcttca
      361 cgttgttgag gattttaccc agaaaccggt atgcagcttt gctgttacga cgggaggaga
      421 gataaaaatc gacagtgcgg ccccggctgt cgacggcccg gtacagatac gcccagcggc
      481 cattgacctt cacgtaggtt tcatccatgt gccacgggca aagatcggaa gggttacgcc
      541 agtaccagcg cagccgtttt tccatttcag gcgcataacg ctgaacccag cggtaaatcg
      601 tggagtgatc gacattcact ccgcgttcag ccagcatctc ctgcagctca cggtaactga
      661 tgccgtattt gcagtaccag cgtacggccc acagaatgat gtcacgctga aaatgccggc
      721 ctttgaatgg gttcatgtgc agctccatca gcaaaagggg atgataagtt tatcacca
//
LOCUS       DADMIB010000405          777 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.420, whole genome shotgun sequence.
ACCESSION   DADMIB010000405 DADMIB010000000
VERSION     DADMIB010000405.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.420"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..777
                     /locus_tag="JNZ89_004636"
                     /pseudo
     CDS             1..777
                     /locus_tag="JNZ89_004636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          172 a          190 c          240 g          175 t
ORIGIN      
        1 atgactcaca gtgggcggca atttgttcca ttgccccaaa gattggctgt acaccggaga
       61 ctctgcgtgt ctgggtacgc cagcatgagc gggataccgg aggcggtgat ggcgggctca
      121 ccaccgctga acgtcagcgt ctgaaagagc tggaacgtga aaatcgtgaa ctgcgccgca
      181 gtaacgatat ccttcgccag gcttccgctt attttgcgaa ggcggagttc gaccgcctct
      241 ggaaaaagtg atgccactgc tggataagct gcgtaagctg tacggggtcg gaccggtatg
      301 cagtgaacta catattgccc cgtcaacgta ttaccactgt cagcaacagc gacatcatcc
      361 tgataaacgc agtgcccgtg cgcagcgcga tgactggctg aagaaagaga tactgcgcgt
      421 atacgatggg aatcatcagg tatacggtgt gcgtaaagtc tggcgtcagt tgttacggga
      481 aggtatcaga gtggccagat gcactgtggc acgtctcatg gcggttatgg gacttgccgg
      541 tgttctccgg ggtaaaaagg tccgtacgac catcagccgg aaagccgttg ccgcaggcga
      601 ccgcgtaaac cgtcagttcg tggcagaacg acctgaccag ctgtgggtgg ctgattttac
      661 ttacgtcagc acatggcagg gcttcgtcta tgtggcgttc attattgatg tgtttgccgg
      721 atacatcgtg gggtggcggg tctcatcgtc catggaaacg acattcgtgc tggatgc
//
LOCUS       DADMIB010000406          742 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.421, whole genome shotgun sequence.
ACCESSION   DADMIB010000406 DADMIB010000000
VERSION     DADMIB010000406.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..742
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.421"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..465)
                     /gene="virK"
                     /locus_tag="JNZ89_004637"
     CDS             complement(<1..465)
                     /gene="virK"
                     /locus_tag="JNZ89_004637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HAY8938229.1"
                     /translation="MFSISNLSFIGFLKRIIFSSDSLPGKWEHRKFRFMYILRCSINP
                     VVSIRYYYELRSLPCIEDILAIHPTLPARIHRPYLHKGGRAWTRGQYILEHYRFVQNL
                     PEKYSKFLFPQKSVSLVQFIGKDGENFDIQCSPSGFDREGELMLSLFYNKTVI"
     gene            complement(470..>742)
                     /locus_tag="JNZ89_004638"
     CDS             complement(470..>742)
                     /locus_tag="JNZ89_004638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HAY8938230.1"
                     /translation="SFGMVLAEASAFSVPVVATQIGGIPEVIQNNQTGTLLPASNKHA
                     WMCALNDFFNDPGRFYQMARLAKQDIEERFDINKTALKILTLAKQK"
BASE COUNT          234 a          162 c          137 g          209 t
ORIGIN      
        1 aataactgtt ttattgtaaa acaatgacaa catcaactct ccttcccggt caaaaccact
       61 gggagaacac tggatatcaa aattctctcc atctttcccg atgaattgga ctaatgatac
      121 cgatttttgt ggaaacaaaa atttagaata tttttctggc aaattttgca caaagcgata
      181 atgctcaaga atatattgtc cacgggtcca ggcgcgcccc cctttatgca aataagggcg
      241 atgaattctt gctggcaacg tggggtgtat tgccagaata tcctcaatgc acggcaagga
      301 acgcagttca taataatatc gaatactgac aaccggattt atagaacatc gcaaaatgta
      361 catgaaccga aattttctgt gttcccactt ccccggtagt gaatctgagg aaaaaataat
      421 ccttttaagg aaaccgataa atgataagtt acttatagaa aacatattgt tacttttgct
      481 tcgctaatgt gagtattttt aacgcagttt tattaatatc aaaccgctct tctatatcct
      541 gttttgccag gcgagccatc tgataaaaac gcccagggtc attaaaaaaa tcattcaggg
      601 cgcacatcca tgcgtgctta ttacttgctg gtaacaatgt cccggtctgg ttgttctgaa
      661 taacctcagg gattccacca atctgagtgg ccactacagg cacagaaaat gccgatgctt
      721 ctgccagcac cataccaaaa ga
//
LOCUS       DADMIB010000407          732 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.422, whole genome shotgun sequence.
ACCESSION   DADMIB010000407 DADMIB010000000
VERSION     DADMIB010000407.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.422"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>732
                     /locus_tag="JNZ89_004639"
     CDS             <1..>732
                     /locus_tag="JNZ89_004639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MolR family transcriptional regulator"
                     /protein_id="HAY8938231.1"
                     /translation="RGDYSALISEFKTFWHSYQREWQLYMLAALPIEKTAQAWNVLSK
                     EPHVGVEFVMTHLQLAGLQGFIHSFSRYPQEALPVAQYFAAIELAPLIARAFNKLKTL
                     RENARTWLLKYPEHAITGLLASALDKAGEAQDNARAALRMLTENGHQPLLQEIARRYN
                     QPEVTDAVNALLALDPLDNHPTKIPTLPAFYQPSLWTRPVLKANAQSLPDSALLHLGE
                     MLRFPQEEALYPGLLQVKDACTADSL"
BASE COUNT          181 a          222 c          166 g          163 t
ORIGIN      
        1 gaggggagat tattctgcgc tgatcagcga atttaaaacc ttctggcact cctatcaacg
       61 ggaatggcag ctttacatgt tagccgccct gcctatcgaa aaaacagcgc aggcgtggaa
      121 tgtcctcagt aaagagccac acgtcggtgt cgagtttgtc atgacgcacc tgcaactcgc
      181 tgggttacag ggttttattc actccttttc acgctatcca caagaagctc tacctgtagc
      241 acaatatttt gcggctatcg aattagcgcc actgattgcc cgtgccttca acaaactcaa
      301 aacgctacgc gaaaacgccc gcacctggct gttgaaatac ccggaacatg ccattaccgg
      361 cctgctggct tcggcgctcg acaaagccgg tgaagcacag gataacgccc gcgctgcctt
      421 gcgtatgctt accgaaaatg gtcatcagcc attactgcaa gaaatcgccc ggcgttataa
      481 ccagccggaa gtaaccgacg cggtgaacgc tctgcttgcg ctcgatccct tagataatca
      541 cccaacaaaa atccccactc ttccggcctt ttatcagcca tcgctctgga cgcgcccggt
      601 attaaaagca aacgcccaat cactgccaga tagtgccctc ctccacctcg gcgaaatgct
      661 ccgcttccct caggaagagg ctctgtatcc gggattattg caggtgaaag atgcctgtac
      721 cgccgactca ct
//
LOCUS       DADMIB010000408          726 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.423, whole genome shotgun sequence.
ACCESSION   DADMIB010000408 DADMIB010000000
VERSION     DADMIB010000408.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.423"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            35..726
                     /locus_tag="JNZ89_004640"
                     /pseudo
     CDS             35..726
                     /locus_tag="JNZ89_004640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          170 a          181 c          200 g          175 t
ORIGIN      
        1 atttagtgta tgatggtgat tttaaggtgc ttgcgtggct tccatttcca tcagatgtcc
       61 ttcctgctcc gctactgaag gcgtggtgcg taacggcaaa agcactgccg gacatcagcg
      121 ctatctctgc tctcattgcc gtaaaacatg gcaactacag ttcacttaca ccgcctctca
      181 gcccggtacg caccagaaaa tcattgatat ggccatgaat ggcgtcggat gtcgcgccag
      241 tgcacgcatt atgggcgttg gcctcaacac ggttttacgt cacttaaaaa actcaggccg
      301 cagtcggtaa cctcgcgcat acaaccgggc agtgatgtga ttgtctgcgc tgaaatggac
      361 gaacagtggg gctacgtcgg tgctaaatca cgtcagcgct ggctgtttta cgcgtatgac
      421 aggatacgga ggacggttgt ggcgcacgtc ttcggtgaac gcactctggc cacactggag
      481 cgtcttctga gcctgctgtc ggcctttgag gtcgtggtat ggatgacgga tggctggccg
      541 ctgtatgaat cacgcctgaa gggaaagctg cacgttatca gcaagcgtta cactcagcgc
      601 attgagcgac ataatctgaa tctgagacaa catctggcaa ggctgggacg gaagtcactg
      661 tcgttctcaa aatcggtgga gctgcatgac aaggtcatcg ggcattatct gaacataaaa
      721 cactat
//
LOCUS       DADMIB010000409          724 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.424, whole genome shotgun sequence.
ACCESSION   DADMIB010000409 DADMIB010000000
VERSION     DADMIB010000409.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..724
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.424"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..587
                     /locus_tag="JNZ89_004641"
     CDS             <1..587
                     /locus_tag="JNZ89_004641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707232.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8938232.1"
                     /translation="NQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALKQ
                     AMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNNA
                     VIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKSV
                     AALITDIIDKPEKHIGENIGINQPVTDGDKPLFM"
BASE COUNT          237 a          142 c          148 g          197 t
ORIGIN      
        1 ttaatcaact ggcagataaa caaaccatta aacaaacttt atttgcccgt cagccagcaa
       61 aaatccacaa accctatcca actaatagca agattattat gggagatgta ctgaatcatg
      121 cagcactgaa gcaggccatg cagggacagg acgttgtgta tgccaacctt acgggggaag
      181 atttagatat tcaggcaaat tcagtgatcg ctgcgatgaa agcctgtgat gttaaacgtc
      241 tgatctttgt tctttccctc ggtatttatg atgaagttcc aggaaaattt ggcgaatgga
      301 ataatgcagt tattggtgag cccctaaaac cattccgcag ggctgcggat gcaattgagg
      361 cttctggact ggaatataca attcttcgcc ctgcctggct gactgatgaa gatattattg
      421 attatgagct tacctcacgc aatgaaccat tcaaaggtac gatcgtatca cgtaagagtg
      481 tcgcagcatt aatcacagat atcatcgata aacctgagaa acacattggt gagaatatag
      541 gtatcaatca acccgtgact gatggtgaca agccattatt catgtaaatc aattacatag
      601 ttaccatcgt aatgtactat gtgcagtacg atttattaaa cttattaagg tgaactgatc
      661 aatccgatgc gattaacatg tgtagaacca gtaagaataa aatacgccat gtatataaca
      721 ttac
//
LOCUS       DADMIB010000410          714 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.425, whole genome shotgun sequence.
ACCESSION   DADMIB010000410 DADMIB010000000
VERSION     DADMIB010000410.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.425"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(149..703)
                     /locus_tag="JNZ89_004642"
     CDS             complement(149..703)
                     /locus_tag="JNZ89_004642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1133 family protein"
                     /protein_id="HAY8938233.1"
                     /translation="MIYPTNTGKSGEHLRLTTLESVWIQGKLRMWGRWSYIGGGKTGN
                     MFNQLLASKKLTKTAINEALRRMKKAGLNKSELEAFLRDMINGKQKSWLAHCTDAEAL
                     CIDRVISEVLAEHPGLISVLRQRYEGRGMTKRKMAELLNDAHPKWSLRTCERRIEHWL
                     KVAEFILYKPMVMAFGIEKKVIAF"
BASE COUNT          175 a          204 c          128 g          207 t
ORIGIN      
        1 catctgacca ccagcacgtt taacgtcctg tgccgttttt caggtataaa aaaacccgca
       61 taaagcgggc tctttcaaat gtccatgtct gctattcgcc tcgcggtaca gctttgcgaa
      121 gcgtacaaga attgaagcag tttttacgtc aaaaagcaat aacttttttc tctataccaa
      181 aagccataac cattggtttg tacaaaataa attctgccac ctttagccaa tgctcaatgc
      241 gtctttcaca ggttcttaaa ctccatttcg ggtgtgcatc attcagcagt tcagccattt
      301 tgcgtttggt catcccccgc ccctcatacc gttgccgaag gacgctaatc aatcctggat
      361 gctctgccag cacctcactt atgacccgat caatacataa cgcctctgca tcagtacaat
      421 gcgccagcca gctcttttgc ttaccgttaa tcatatcccg caaaaaagcc tcaagttcag
      481 acttgttcag acctgctttt ttcatcctcc ggagcgcctc gttaattgcc gtttttgtca
      541 gctttttaga ggccaacaac tggttgaaca tattccccgt cttaccgccg ccaatatacg
      601 accagcgccc ccacatgcgc agttttccct gaatccagac actttccagc gtggtgagac
      661 gaaggtgttc cccgcttttg cctgtatttg ttgggtaaat cataaataac cttc
//
LOCUS       DADMIB010000411          672 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.426, whole genome shotgun sequence.
ACCESSION   DADMIB010000411 DADMIB010000000
VERSION     DADMIB010000411.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.426"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            193..462
                     /locus_tag="JNZ89_004643"
     CDS             193..462
                     /locus_tag="JNZ89_004643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938234.1"
                     /translation="MAQVNMSVRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQ
                     HNSWFRDQVAAGRQQLECGDVLPHDMVESSAAAWRDEMSRKIADK"
     gene            459..586
                     /locus_tag="JNZ89_004644"
                     /pseudo
     CDS             459..586
                     /locus_tag="JNZ89_004644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001553778.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
BASE COUNT          167 a          154 c          197 g          154 t
ORIGIN      
        1 ctgtcagcgc cagtgatagg acaggtgaaa cctgtcaata cgtaccggct tacgccgggc
       61 ttcggcggtt ttactcctct gccatatgca acaacggagt gccgccttac atgccgctgg
      121 cgcggcatat cctggtgacg atatctgaac agttatatac tgtgtatata cgtggtaatg
      181 acgaggtggc aaatggcaca ggttaatatg agtgtaagaa tcgacgcaga actgaaggat
      241 gcttttatgg ccgctgcaaa aagcatggac cgtaatggct ctcagttaat ccgggatttt
      301 atgcgccaga ccgttgaacg gcagcacaat tcttggttcc gtgaccaggt tgcggcaggc
      361 cgtcagcaac tcgaatgcgg tgatgtgctt ccccatgaca tggtcgaatc ctctgctgct
      421 gcatggcggg atgaaatgag caggaagatt gctgataaat gatggagatg ttctggacca
      481 tgctggccat ccaggacagg aagcgcattc gtagtacatt gcggagcaga acctgatggc
      541 cgccattgaa ccggacgaac ggattggtta ttcagccagc agcctggcag ggcagccgta
      601 taaaggccgc aacggtcgtg tggaaggaac atctggacca cacaaggtag cgtgtaacgt
      661 tattttgtgt ga
//
LOCUS       DADMIB010000412          656 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.428, whole genome shotgun sequence.
ACCESSION   DADMIB010000412 DADMIB010000000
VERSION     DADMIB010000412.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.428"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            215..574
                     /locus_tag="JNZ89_004645"
     CDS             215..574
                     /locus_tag="JNZ89_004645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001331208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1889 family protein"
                     /protein_id="HAY8938235.1"
                     /translation="MQIKVIYSLIDNMVNFKDKNMPAVIDKALDFIGAMDVSAPTPSS
                     MNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMEFGERTVIK
                     NPEYFSTYMQEELKALV"
BASE COUNT          211 a          127 c          131 g          187 t
ORIGIN      
        1 aactatataa ataaacataa ccatgccgtt gtgttcgccc ttcgattagc acctctggtt
       61 ttctttctta gctgaacaat ctggttatag cgtgcggact gaccgttaat tttctccatc
      121 ttactggata acacaccatg agctgctacc tttaaaacac ctgaatgtca acaggttaac
      181 tcgtgccata tcgttataat ccctttgata ttagatgcaa attaaggtca tatatagcct
      241 tatcgataac atggttaatt ttaaggataa gaatatgcct gctgtaatag ataaagccct
      301 ggatttcatt ggtgccatgg atgtatcagc gccaacacca agttcgatga atgaaagcac
      361 agcgaaggga atctttaaat atttaaaaga actgggagta cccgcgagtg ccgctgatat
      421 tacggcgcga gctgaccagg aaggctggaa ccctgggttc acggaaaaaa tggttggatg
      481 ggcaaaaaaa atggagtttg gtgaacgcac tgtaattaaa aatcctgaat acttttcaac
      541 atatatgcag gaagaactaa aagcactggt ctgagtttaa tttatatcag cataaatggg
      601 tcaggacgct tttaatcaca tataaaaagc gtcctttttc tcacaatcaa ataatc
//
LOCUS       DADMIB010000413          656 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.429, whole genome shotgun sequence.
ACCESSION   DADMIB010000413 DADMIB010000000
VERSION     DADMIB010000413.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.429"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(64..594)
                     /locus_tag="JNZ89_004646"
     CDS             complement(64..594)
                     /locus_tag="JNZ89_004646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY8938236.1"
                     /translation="MSITGVNIGRLFREGFSNYDPIGALNAMASQRTKEARGGELQIN
                     ELLPASLDAAKAHGLTERDVYEATDYYKTPRGQQPGGATKMLFSHAQKTLAWDAFAFT
                     EVLLTQPVMVVVGEKVGAFGAYRDGLEVYGRAMVSQDRQLVSLPDFSHYELYDKPEAV
                     QEALEKVIPFFNPHLG"
BASE COUNT          166 a          177 c          137 g          176 t
ORIGIN      
        1 ggcgggctat ctgaccgcca gcaccaagaa tcagtacatt tttcataata tttctcatga
       61 aacttatccc agatgggggt tgaaaaaagg aataactttt tccagcgcct cctgaactgc
      121 ttccggtttg tcatacagtt cataatgtga gaaatcgggt aatgaaacta actgacgatc
      181 ctgcgaaacc atcgcccggc catagacttc cagtccatca cgataagcac cgaaggcacc
      241 gactttttca ccaacgacta ccatcaccgg ctgagtcagt aacacttcag taaatgcgaa
      301 ggcatcccag gccagcgttt tctgtgcatg tgagaacaac atttttgtcg cacctcccgg
      361 ttgttgcccg cgtggtgttt tatagtagtc agttgcttca taaacatcgc gttcggtcag
      421 tccatgggct tttgctgcat ccaggctggc gggaagtaat tcgttgatct gtaattctcc
      481 accacgagcc tctttggttc gttgcgacgc cattgcattc aatgcgccaa tcggatcgta
      541 attgctgaaa ccttcccgaa aaagacgccc gatattaaca cccgtaatac tcactactgc
      601 tttaattcgt ttttctgtca gcgcggcatt aatggcatag tcaccacccc cacaca
//
LOCUS       DADMIB010000414          655 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.430, whole genome shotgun sequence.
ACCESSION   DADMIB010000414 DADMIB010000000
VERSION     DADMIB010000414.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..655
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.430"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            17..>655
                     /locus_tag="JNZ89_004647"
     CDS             17..>655
                     /locus_tag="JNZ89_004647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2776 domain-containing protein"
                     /protein_id="HAY8938237.1"
                     /translation="MNIYIGWLFKLIPLIMGLICIALGGFVLESSGQSEYFVAGHVLI
                     SLAAICLALFTTAFIIISQLTRGVNTFYNILFPIIGYAGSIITMIWGWALLAGNDVMA
                     DEFVAGYVIFGIGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPVQAYSSLIGNCLI
                     AVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLGLTAICACLIGLVATIVHQ"
BASE COUNT          137 a          146 c          161 g          211 t
ORIGIN      
        1 acctgaggag tttaaagtga acatatatat cgggtggctt ttcaaattaa tccctttgat
       61 tatgggctta atttgtatcg cgttaggtgg ctttgtgctg gaaagttcag ggcaaagcga
      121 gtatttcgtc gcgggtcatg tgctgatttc tctggcagcc atatgcctgg cattattcac
      181 taccgcattt attatcattt cgcagctcac gcgcggcgtt aatacgtttt acaatatatt
      241 gttccccatt attggctatg cagggtcaat tatcaccatg atatggggtt gggcactgtt
      301 agcaggcaat gatgtgatgg cagacgagtt tgtcgccggc tatgttattt tcggcattgg
      361 tatgattgcc gcatgtgtat cgacggtggc agcgtcgtcc ggtcactttc tgctcattcc
      421 caaaaatgca gcggggagca agagcgacgg aacaccggta caggcttatt cttcattaat
      481 cggtaactgc ctcattgccg ttcccgtttt actcaccctg ctcggtttca tttggtctat
      541 tacgctgtta cgtagtgctg acataactcc gcattatgtc gcgggtcacg tattgcttgg
      601 gttaaccgca atctgtgcct gtctaattgg ccttgttgcc acaattgtcc atcaa
//
LOCUS       DADMIB010000415          630 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.431, whole genome shotgun sequence.
ACCESSION   DADMIB010000415 DADMIB010000000
VERSION     DADMIB010000415.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.431"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>630
                     /gene="aadA"
                     /locus_tag="JNZ89_004648"
     CDS             <1..>630
                     /gene="aadA"
                     /locus_tag="JNZ89_004648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001424636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AadA family aminoglycoside
                     3''-O-nucleotidyltransferase"
                     /protein_id="HAY8938238.1"
                     /translation="QLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVT
                     VRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQ
                     RNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLT
                     LWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQY"
BASE COUNT          147 a          160 c          178 g          145 t
ORIGIN      
        1 tcaactatca gaggtagttg gcgtcatcga gcgccatctc gaaccgacgt tgctggccgt
       61 acatttgtac ggctccgcag tggatggcgg cctgaagcca cacagtgata ttgatttgct
      121 ggttacggtg accgtaaggc ttgatgaaac aacgcggcga gctttgatca acgacctttt
      181 ggaaacttcg gcttcccctg gagagagcga gattctccgc gctgtagaag tcaccattgt
      241 tgtgcacgac gacatcattc cgtggcgtta tccagctaag cgcgaactgc aatttggaga
      301 atggcagcgc aatgacattc ttgcaggtat cttcgagcca gccacgatcg acattgatct
      361 ggctatcttg ctgacaaaag caagagaaca tagcgttgcc ttggtaggtc cagcggcgga
      421 ggaactcttt gatccggttc ctgaacagga tctatttgag gcgctaaatg aaaccttaac
      481 gctatggaac tcgccgcccg actgggctgg cgatgagcga aatgtagtgc ttacgttgtc
      541 ccgcatttgg tacagcgcag taaccggcaa aatcgcgccg aaggatgtcg ctgccgactg
      601 ggcaatggag cgcctgccgg cccagtatca
//
LOCUS       DADMIB010000416          624 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.432, whole genome shotgun sequence.
ACCESSION   DADMIB010000416 DADMIB010000000
VERSION     DADMIB010000416.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.432"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..236
                     /gene="rclC"
                     /locus_tag="JNZ89_004649"
     CDS             <1..236
                     /gene="rclC"
                     /locus_tag="JNZ89_004649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="reactive chlorine species resistance protein
                     RclC"
                     /protein_id="HAY8938239.1"
                     /translation="AFTTPLVTLSFLITTPEAWVSALGDAHYGFPYLSGAGRLVLKDT
                     LMLAGAVMIMADSAREILKQRSNESSSTLKTEY"
     gene            complement(396..>624)
                     /locus_tag="JNZ89_004650"
     CDS             complement(396..>624)
                     /locus_tag="JNZ89_004650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308365.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HAY8938240.1"
                     /translation="ISQVILRWNIQRGVVVIPKSTHQQRIEENFAIWDFSLTEKEMAQ
                     ISSLDLGYVGESVKHFNPEFVRGCLAVKIHD"
BASE COUNT          180 a          140 c          121 g          183 t
ORIGIN      
        1 tggcatttac cacgccgctg gtaacactct catttttaat caccaccccg gaggcatggg
       61 tatccgcatt gggtgacgct cattatggtt tcccttattt atccggtgct ggtcgcttgg
      121 tattgaaaga tactctgatg ctggcaggtg ctgtcatgat aatggcagat tcggcgcggg
      181 aaattcttaa acaacgcagt aatgaatcca gttcaacgtt aaaaactgaa tattgataat
      241 ccgaacactg tctgttgttc actttttcag gcgtcaggcc ccctttctga tgatgaagac
      301 tgacgccata ttaccggaga tatgacagag tgaagatcaa tatcactccc ctgttaaaag
      361 attcttgtcg tctcaggtaa aatatatgat taatatcaat catgtatttt tacagcaaga
      421 caaccacgaa caaattcagg attaaaatgt tttaccgact ccccaacata acccaaatca
      481 agcgaactaa tttgtgccat ttctttctct gtcagtgaga aatcccagat agcaaaattt
      541 tcttcgatac gctgttgatg tgtcgatttc ggaataacga ccactccccg ttgaatattc
      601 caacgcagaa tgacttgaga aatc
//
LOCUS       DADMIB010000417          600 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.433, whole genome shotgun sequence.
ACCESSION   DADMIB010000417 DADMIB010000000
VERSION     DADMIB010000417.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.433"
                     /strain="H113140272"
                     /db_xref="taxon:621"
BASE COUNT          222 a           87 c          102 g          189 t
ORIGIN      
        1 tgtgtgtagt aataaatcag ccctaaatgg gtaaaatata aaactaatgg attacatctg
       61 atttcaatct agccattaca aaacttaaat caagtgttaa atatgtaact aaatgtaact
      121 tgttatatta aaatattaac cttaaggttt tattaagttt agaaatgata gaaaagttgt
      181 acatttggtt tttattgcac aattttaaaa aatcatacaa atggtgataa cttactaata
      241 atacatataa aaaatatttc ggtgtagtcc tttcgtcatg taaaacgttc ttgttttttc
      301 tccgcacctc cgtggacaaa tttttactcc aaaaagacga ggtttgtcac ggcttgtgcg
      361 caagacatat cgcagcaatc agcgacgggc aagaaaaatg actgtctggt gatttttgat
      421 agcggaaaac ggagatttaa aagaaaacaa aatatttttt gcgtagataa cagcgtattt
      481 acgtgggttt taatactttg gtatgaacaa aaaaagaaaa atacaacgcg cgggtgagtt
      541 attaaaaata tttccgcaga catactttcc atcataacgc agcgttaaca aaatacaggt
//
LOCUS       DADMIB010000418          590 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.434, whole genome shotgun sequence.
ACCESSION   DADMIB010000418 DADMIB010000000
VERSION     DADMIB010000418.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.434"
                     /strain="H113140272"
                     /db_xref="taxon:621"
BASE COUNT          190 a           94 c          105 g          201 t
ORIGIN      
        1 atatttgtat ggtgcaatca tgatgagctt ctcagagaat aattctctat taccgggcaa
       61 aatcaggaac acaggaatta atatatattt aacatccccc ttacaaaggt gagtttatat
      121 cgagttattc cctaagttgt cgttacttat tccaattcgt tactataaat atggcaaaaa
      181 tattacaaca aacagcggtt aaaaaatttg gtgaagattt tctgtaataa tcctaattag
      241 ttatgggaat ttcgcttgat gtatctgcat aacaaaaaca atatgcgcca tttttgcatt
      301 actaataaga aaaagcaaaa aacatcgata ttcatttttg gtcaatgggt tttctggcct
      361 atcgttgtta ttgtgctact ggttatcatt ttcatcttgc cagcatattg gagcgtgatc
      421 aattttgatc agctgtgaag gtggctgatg tgtagtgata caaaaactta cgttatatca
      481 ctgctaatga gatatccgtc atctgaacac ttatgtcttt aattattctc gtggttcact
      541 ataggcaata agcacaaaag tgtaggatgt tacaagaatg attaggactc
//
LOCUS       DADMIB010000419          587 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.435, whole genome shotgun sequence.
ACCESSION   DADMIB010000419 DADMIB010000000
VERSION     DADMIB010000419.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.435"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(1..362)
                     /locus_tag="JNZ89_004651"
                     /pseudo
     CDS             complement(1..362)
                     /locus_tag="JNZ89_004651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233185.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
     gene            411..>587
                     /locus_tag="JNZ89_004652"
     CDS             411..>587
                     /locus_tag="JNZ89_004652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938241.1"
                     /translation="MTKNTRFSPEVHQRAVRMVLESQGEYDSQWATICSIAPKIGCTP
                     ETLRVWVRQHERDTG"
BASE COUNT          154 a          158 c          132 g          143 t
ORIGIN      
        1 atatcaaaca gccctacacc aagtgcccag ttttcaatcc ccacacccgc ggcgacatcc
       61 gtggttaagg ttttccagtc cagcatctgg atctcatatt gcgggagttt atgtttgccg
      121 acccagaagt ctgcctctgg tgcgaagggt aaaaaacctc gcgttgtcag gtaaatatcg
      181 ctgaactgca tgatattttc attggcactg tcaccaaacc aggcatcgtt atactgctca
      241 cccacgttgc catcataggt aacgaccgca tttgccgttt taccgtcctg attataaaca
      301 cgctgattta aggtcaggtc aaaccaaccg ctcatctcat taccaaaacg tcccagtgaa
      361 ccgccccggg tttcctggag actaaacttc ctgagaaaga ggtaaacagg atgactaaaa
      421 atactcgttt ttcccccgaa gtccatcaac gggcagtccg tatggttctg gaaagtcagg
      481 gcgaatatga ctcacaatgg gcgacaattt gttccattgc accaaagatt ggctgtacac
      541 cggagactct gcgtgtctgg gtacgccagc atgagcggga taccgga
//
LOCUS       DADMIB010000420          581 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.436, whole genome shotgun sequence.
ACCESSION   DADMIB010000420 DADMIB010000000
VERSION     DADMIB010000420.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.436"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..289
                     /locus_tag="JNZ89_004653"
     CDS             <1..289
                     /locus_tag="JNZ89_004653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938242.1"
                     /translation="FIPFVLVQPILAAITLAAYYMGIIPPVTNIAPWTMPTGLGAFFN
                     TNGSVAALLVALFNLGIATLIYLPFVVVANKAQNAIDKEESEEDIANALKF"
     gene            340..>581
                     /gene="chbA"
                     /locus_tag="JNZ89_004654"
     CDS             340..>581
                     /gene="chbA"
                     /locus_tag="JNZ89_004654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIA"
                     /protein_id="HAY8938243.1"
                     /translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQ
                     GDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGK"
BASE COUNT          159 a          133 c          160 g          129 t
ORIGIN      
        1 gtttatcccg tttgtactgg tacaaccgat tctggcggca atcaccctcg cagcgtacta
       61 catgggcatt attcctccgg tgaccaatat tgcaccgtgg accatgccaa ccggtctggg
      121 agccttcttt aacaccaacg gtagcgtcgc tgcattgctg gtcgcactct tcaaccttgg
      181 tatcgcaacg ttaatttatc tgccctttgt tgtggtggct aacaaagcgc aaaacgcgat
      241 tgataaagaa gagagcgaag aagatatcgc taacgccctg aaattttaat cgatgccggt
      301 acggttaatc gtgccggtaa gaagagagag gaacgatgta tgatggatct cgataacatt
      361 cccgatacgc aaacagaagc tgaagagctg gaagaagtgg tgatggggct tatcatcaac
      421 tccggacaag cgcgcagcct ggcgtatgcg gcactgaaac aggcgaagca gggcgatttt
      481 gccgcagcaa aagccatgat ggatcagtca cggatggcat tgaatgaagc gcatctggta
      541 cagacgaaac tgattgaagg cgatgcgggc gaaggtaaga t
//
LOCUS       DADMIB010000421          574 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.437, whole genome shotgun sequence.
ACCESSION   DADMIB010000421 DADMIB010000000
VERSION     DADMIB010000421.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.437"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            325..>574
                     /locus_tag="JNZ89_004655"
     CDS             325..>574
                     /locus_tag="JNZ89_004655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938244.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKTNPNKATKALQKNILRVTNSSS
                     SGISEKHLDHCANTVKNFLRKSIAAQSYSKMFSQGTSFK"
BASE COUNT          220 a           95 c          104 g          155 t
ORIGIN      
        1 gactctatca tcgccaatca tcagacattg aaatagacga cactgagatg acgcttacaa
       61 ttcttttggt ttctgtaata agtaatctga catcccccgt gcccagaaga ggagagggat
      121 atcaagccca agggttaata attgatacta cggttaaaat tgccttcagt aaaggaaacg
      181 tgattaaatt caggggattt cagagtgaaa accatacaac atattaaaat ctgttcattt
      241 agctataata catacaagaa agtgtccagt tagataatgt tatctaaata accacagata
      301 aaaacgcaca taattggggg ggggatgaaa atacctgaag cagtaaatca tattaatgtt
      361 cagaataata ttgatcttgt tgatggaaaa acgaatccga ataaagcaac aaaagcatta
      421 caaaaaaata tattgcgcgt aacaaactca tcttcttctg gcataagtga aaaacattta
      481 gatcactgtg ctaatactgt gaaaaacttt ttaaggaagt ctatagcagc gcaaagttat
      541 agcaaaatgt tttctcaagg gaccagtttc aaat
//
LOCUS       DADMIB010000422          573 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.438, whole genome shotgun sequence.
ACCESSION   DADMIB010000422 DADMIB010000000
VERSION     DADMIB010000422.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..573
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.438"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>573
                     /locus_tag="JNZ89_004656"
     CDS             <1..>573
                     /locus_tag="JNZ89_004656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MolR family transcriptional regulator"
                     /protein_id="HAY8938245.1"
                     /translation="RHINHPFALTLLIRVAGQTKRCHDRMTKAIAAFPHAAMAALTEL
                     LGQKEENSWRIMLMTMLISQPALAEQVLPWLSTPAVAVLKSYQQQLTQPSNHACADLL
                     PAVLVSPPWLSKKKKSVMPVLDLTPLPLESCCTLTETAEKEIHTRHRWHAHQIDIGQK
                     EDIQNYLARLGFNRWNNGQYMKASDAVVEL"
BASE COUNT          165 a          149 c          129 g          130 t
ORIGIN      
        1 tgcgtcatat caatcatccg ttcgcattga cactgcttat acgtgtagcc gggcaaacta
       61 aacgctgtca cgatcggatg acgaaagcca ttgctgcgtt cccacatgca gcaatggcgg
      121 cactgacgga acttcttggg caaaaagaag agaacagttg gcgcattatg ctaatgacaa
      181 tgcttatctc acaaccagca ctggcagaac aggtccttcc ctggctctcg acacccgcag
      241 ttgccgtact gaaatcatac cagcaacaac tgacacagcc ctcaaaccat gcctgcgccg
      301 atctactgcc tgccgtatta gtctcaccgc cctggctttc gaaaaagaaa aaatctgtaa
      361 tgccggtatt ggatttaacg ccattaccgt tggagtcatg ctgtacattg actgagacgg
      421 cagaaaaaga gattcataca aggcatcgct ggcacgcaca tcaaatagac atcggccaaa
      481 aagaggatat tcagaactac ctggcacgtc tgggtttcaa tcgctggaat aatggccagt
      541 atatgaaagc gtctgatgct gttgtagaac tct
//
LOCUS       DADMIB010000423          559 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.439, whole genome shotgun sequence.
ACCESSION   DADMIB010000423 DADMIB010000000
VERSION     DADMIB010000423.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.439"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..279
                     /locus_tag="JNZ89_004657"
     CDS             <1..279
                     /locus_tag="JNZ89_004657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY8938246.1"
                     /translation="SLNVYCRNGQVEIDNNIGENALRSVAVGRKNYLFFGSDNGGESA
                     AIIYSLLVTCKLNGVEPEDWLREVIVKLNDWPSNRVHELLPWNFSAVK"
BASE COUNT          138 a          122 c          150 g          149 t
ORIGIN      
        1 agcctgaacg tgtactgtcg taatggccag gtggaaatcg acaacaacat cggtgaaaac
       61 gcgctgcgat cggtggcggt tggaagaaaa aattatctct tcttcggttc tgacaacggt
      121 ggagaaagcg cggcgattat ctacagtctg ctggtcacct gcaaactgaa cggagtggag
      181 ccggaggact ggttgcgcga agtgatcgtg aagctcaatg actggccgtc gaaccgagtg
      241 catgaactgc tgccctggaa cttctcagct gtaaaataat ccttccgcta cgtacttctc
      301 tgggcgctta ccactcaacg gcatcgtcaa aattatcaaa gcgcagaaca tagatttatc
      361 atgtgtttta tggatggctt tctccatcag gcatcgttcg tcacgggaaa ttggtgctat
      421 gatcggcatt gatcagtccg gttggtgatt tgttttgatt tggcgattga tcagatcgca
      481 caatccgggc tgagttccct ctaagtgatc taggttgtgt cccttaatta cgtaagcgtt
      541 gataaaagag tcggatgca
//
LOCUS       DADMIB010000424          558 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.440, whole genome shotgun sequence.
ACCESSION   DADMIB010000424 DADMIB010000000
VERSION     DADMIB010000424.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..558
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.440"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            2..>558
                     /gene="fimZ"
                     /locus_tag="JNZ89_004658"
     CDS             2..>558
                     /gene="fimZ"
                     /locus_tag="JNZ89_004658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001719888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis transcriptional regulator
                     FimZ"
                     /protein_id="HAY8938247.1"
                     /translation="MIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP
                     VDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKC
                     NDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGL
                     SNKEIADKLLLSNKTVSAHKSNIYG"
BASE COUNT          180 a          102 c          106 g          170 t
ORIGIN      
        1 ggtgatcatt atggatactc atcctatcat cagaatgtct attgaagttc tgttgcaaaa
       61 aaacagtgaa ttgcagattg tcctgaaaac ggatgattac cgcataacca tcgattatct
      121 ccgaacccgt cctgttgatt taatcattat ggatatagac ttgcccggaa cagacggttt
      181 taccttcctg aaaaggatca aacaaatcca gagcacagtg aaagtgttat ttttatcatc
      241 gaaatcagaa tgcttttatg ctggcagagc gatacaagct ggtgctaacg gttttgtcag
      301 taaatgcaat gatcagaatg atatttttca tgccgttcag atgatcctct ccggatacac
      361 gttttttccc agcgaaacgc ttaactatat aaaaagcaat aaatgtagta cgaatagttc
      421 aacggtcact gtgctatcta atcgtgaagt gaccatatta cgttatctgg ttagcggatt
      481 atctaataaa gaaattgccg ataagttatt gcttagcaat aaaacagtta gtgcgcataa
      541 atctaatatt tatggcaa
//
LOCUS       DADMIB010000425          554 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.441, whole genome shotgun sequence.
ACCESSION   DADMIB010000425 DADMIB010000000
VERSION     DADMIB010000425.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.441"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..464
                     /gene="virK"
                     /locus_tag="JNZ89_004659"
     CDS             <1..464
                     /gene="virK"
                     /locus_tag="JNZ89_004659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HAY8938248.1"
                     /translation="LTQNGHIAFIGGLQGAPKNTGPDVIRCATRACYGIFPKRIIFEA
                     FCALMKACNISECLAVSEHSHVFRQLRYWYQKRKTFVAVYSDFWESVAGKTCGDWYRL
                     PTQVIRKPLSDIASKKRSEYRKRYALLDYIHETTIRSLDAYPVHSEHQDLN"
BASE COUNT          166 a          103 c          122 g          163 t
ORIGIN      
        1 ttctgactca aaatggacac attgctttta ttggcggatt acagggagcc cctaaaaata
       61 ccggacctga tgttattcgg tgcgcaaccc gggcctgtta tgggattttc ccaaaacgga
      121 ttatttttga agcattttgt gcgttgatga aagcttgcaa tatctctgag tgtctggcag
      181 tcagtgagca cagtcatgtt ttccggcaat tgagatactg gtatcagaaa cgcaaaacct
      241 ttgttgcggt ctatagtgat ttctgggagt ctgtagcagg aaaaacctgt ggtgactggt
      301 acagattacc aacccaggtg attcgaaagc cgctaagcga tatagccagt aaaaaacgct
      361 ctgagtaccg aaaacgatac gctttgctgg attatatcca tgaaactact atccgctctt
      421 tggatgcata tcctgtacac tcagaacatc aggatttaaa ttaaggtttg atgtattctc
      481 tgaataaaac agtaatgata attttggtag aggcattcgc actaaataat gaaaaaatat
      541 aaatctgagt ttat
//
LOCUS       DADMIB010000426          546 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.442, whole genome shotgun sequence.
ACCESSION   DADMIB010000426 DADMIB010000000
VERSION     DADMIB010000426.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.442"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>546)
                     /locus_tag="JNZ89_004660"
     CDS             complement(<1..>546)
                     /locus_tag="JNZ89_004660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HAY8938249.1"
                     /translation="HRQSFFLVPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLPD
                     NHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS
                     YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLF
                     IALGENNQRPTAQDLDKLQGK"
BASE COUNT          143 a          148 c          144 g          111 t
ORIGIN      
        1 gtttgccctg taatttatcc agatcctgcg ccgtcgggcg ctgattgttt tcgcccagag
       61 caataaaaag ataaccttta ccgtcgaata ccagccgccc gccaaaatgg ttgccggtag
      121 acagttttgg catctggcgg aagacggtgc ggaagtcggt cacttttgag agatcatcac
      181 ttaagcggcc ataacccaca gcagttccgg ctttgccatc atcgccaact tcggaataac
      241 ttaaccagat gcggcgagac tgagcaaaat caggcgctaa aaccacgtcc agcaggccgc
      301 cctgcccgtg cgcccaaacg tccggaactc cggaaagcgg cgcagataat ccttttcctg
      361 cttgccagtg acgcaactcg ccgccgcgca gagtgattaa cataccgtga ttatcgggta
      421 aaaaggccag tgcccaggga tggtcgagtt tgtcttgcag tacttcgaca tttaccgttg
      481 caggagccgc ccagagagcg gaagaaagac aaataagggg cacaaggaaa aaggattgtc
      541 gatgca
//
LOCUS       DADMIB010000427          544 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.443, whole genome shotgun sequence.
ACCESSION   DADMIB010000427 DADMIB010000000
VERSION     DADMIB010000427.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..544
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.443"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(50..>544)
                     /locus_tag="JNZ89_004661"
     CDS             complement(50..>544)
                     /locus_tag="JNZ89_004661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000824385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY8938250.1"
                     /translation="SVDYNIEGFGFVGAYSKSDRTNEQAGDGYGDNAEVWSLAAKYDA
                     NNIYAAMMYGETRNMTVLANDHFANKTQNFEAVVQYQFDFGLRPSLGYVYSKGKDLYA
                     RDGHKGVDADRVNYIEVGTWYYFNKNMNVYTAYKFNLLDKDDAAITDAATDDQFAVGI
                     IYQF"
BASE COUNT          150 a          119 c          111 g          164 t
ORIGIN      
        1 tcaggctagt gttatgtttt acagtaacac gccgcggcgc gttggctgat tagaactggt
       61 agatgatacc aactgcaaac tggtcatcag ttgcggcatc ggtaatcgct gcatcgtctt
      121 tatccagcag gttaaatttg tatgctgtgt agacgttcat gttcttattg aagtagtacc
      181 aggtaccaac ttcgatataa tttacgcggt cagcatcaac acctttatgt ccatcacgag
      241 cataaagatc tttgcctttg gaatatacgt agcctaaaga cggacgtaaa ccgaagtcga
      301 actgatactg tacaacagct tcaaagtttt gggttttatt tgcaaaatga tcattagcca
      361 aaacggtcat gttgcgggtt tcaccgtaca tcattgctgc atagatatta tttgcatcat
      421 acttggctgc taatgaccac acttcagcgt tatcaccgta gccgtcacca gcttgttcat
      481 tagtacgatc agatttgcta tatgcaccta caaaaccaaa accttcgatg ttgtagtcta
      541 caga
//
LOCUS       DADMIB010000428          532 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.444, whole genome shotgun sequence.
ACCESSION   DADMIB010000428 DADMIB010000000
VERSION     DADMIB010000428.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..532
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.444"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            86..334
                     /locus_tag="JNZ89_004662"
     CDS             86..334
                     /locus_tag="JNZ89_004662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001349157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938251.1"
                     /translation="MFIYASGGNGGSAGGACANTSRLQGYVGGTLISVNASNNPAYGK
                     TAFISFAVPAGTSYQITSYPTENTSCGAGVFSVFGYQT"
BASE COUNT          135 a          118 c          126 g          153 t
ORIGIN      
        1 gacttctggt tcgctcaatg gttcttacac aaacttaggt tcacatagag gttcattctc
       61 agggcggaat tcagggggca gtacattgtt tatttatgca tctggaggta atggaggatc
      121 tgccggaggt gcatgtgcaa atacatcccg actgcaggga tatgttggtg ggacgctaat
      181 tagcgtgaat gccagcaata accctgcata tggaaaaaca gcctttatca gctttgctgt
      241 acctgcaggt acttcctatc agataacatc ctatccaaca gaaaatacat catgtggtgc
      301 cggggtattt tcagtatttg gatatcaaac ttaattgagc gttacacacg acgcaataca
      361 acctgtctta tgctcgtatt tgtaccattt gcgtgaacct gctgggctct caactacctg
      421 gcagtagtgg gcatcctctg cgttgcccat tctggcaatg gcacagaagt cgaattgccc
      481 cagataacct gtggtggaaa gctgagtaac tttgagtttt ccacctattg tc
//
LOCUS       DADMIB010000429          529 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.445, whole genome shotgun sequence.
ACCESSION   DADMIB010000429 DADMIB010000000
VERSION     DADMIB010000429.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..529
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.445"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            1..529
                     /locus_tag="JNZ89_004663"
                     /pseudo
     CDS             1..529
                     /locus_tag="JNZ89_004663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417134.2"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT          169 a          108 c          142 g          110 t
ORIGIN      
        1 catatggttc ggcaaataag acgattatta aagataaagg aacaatgtca gttttaacga
       61 atgctaaagc tgatgcgacc cgaatagata acggcggggt aatggatgtt accggaaacg
      121 cgaccaatac cataatcaat ggtggtacac agaatattaa taatcatggt attgccacgg
      181 gtaccaatat caacagcgga acacaaaata tcaagagcgg cgggaaagct gacacgacaa
      241 atatttccac cgggagccgg caggttgttg agaaagatgg tacggcaact ggcagcaata
      301 ttagcgccgg aggctcgctg attgtctata ccggcggtat agcacatggg gttaaccagg
      361 agacgggcag tgctttagtt gccaacacgg gcgcagggac tgatatcgaa ggatacaaca
      421 agctctctca cttcactatt acccggaggg gaggctaatt atgttgtgct ggaaaatacc
      481 ggcgaactga cggtagtggc taaaacctcg gcgaaaaata ctaccgttg
//
LOCUS       DADMIB010000430          527 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.446, whole genome shotgun sequence.
ACCESSION   DADMIB010000430 DADMIB010000000
VERSION     DADMIB010000430.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.446"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..325
                     /gene="dsbG"
                     /locus_tag="JNZ89_004664"
     CDS             <1..325
                     /gene="dsbG"
                     /locus_tag="JNZ89_004664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415137.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HAY8938252.1"
                     /translation="SGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYKASGGK
                     LKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNI
                     IMGNK"
BASE COUNT          191 a           98 c          114 g          124 t
ORIGIN      
        1 ttctggcaaa gtgcaattaa gaacattgtt ggttggggtt atcaagccag aaagcccggc
       61 gacagcagcg gcaattcttg cctccaaaga tcccgcaaaa acctggcaac aatataaagc
      121 ctctggtggc aagcttaagc taaacgtgcc tgcaaacgta agtacagagc aaatgaaagt
      181 gttaagtgac aatgagaaac tgatggacga tctgggggca aatgtcacgc cggctatcta
      241 ttacatgagt aaggaaaata cgctacaaca ggccgtgggg ttgcccgatc agaaaacgct
      301 taatatcatt atggggaata aataaaaggt aattcatgga tggttgaact atatctctgc
      361 ttttcaacca tcctaaaaag catgaattgc tcgctctgcc ctaagtggct gtgctatttt
      421 agaaaaactt aatcctgagt taagcaaaaa aacataatca ataaaaatat atacgcagaa
      481 aaacattgat taagtgaata tatcatggaa gaaaaatata accggag
//
LOCUS       DADMIB010000431          518 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.447, whole genome shotgun sequence.
ACCESSION   DADMIB010000431 DADMIB010000000
VERSION     DADMIB010000431.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..518
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.447"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>518)
                     /locus_tag="JNZ89_004665"
     CDS             complement(<1..>518)
                     /locus_tag="JNZ89_004665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001063816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISSso6 family transposase"
                     /protein_id="HAY8938253.1"
                     /translation="DLARAWASARDDLRHARQRLKSFLLVHGVHYVGRADWGPAHRRW
                     LSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESALKEAVTEWRLYPVVEALQAMRGI
                     QFITAVGLISELGDLTRFEHPRQLMSWFGITPSEYSSGGSRHQGSITKAGNSYARKLL
                     VEAAWSYRHPAR"
BASE COUNT          118 a          148 c          125 g          127 t
ORIGIN      
        1 atgcgtgccg gatgacggta actccacgct gcctcgacca atagctttct ggcatagctg
       61 tttccggctt tggtaatgct gccctgatgt ctgcttccac ccgatgaata ttctgatggc
      121 gtgataccaa accatgacat cagttgtcgt ggatgttcaa aacgggtcag atcacccagt
      181 tcagaaatta atccaaccgc agtaataaac tgaatccctc gcatggcttg cagcgcctct
      241 actaccggat acagcctcca ttcggtaacg gcctccttca gggcggattc cagccgttca
      301 cattgtgcct gccggtcttc tattgtacga cggtgttcgt caaaagctaa ttgtcgccag
      361 ggactttcga atgagtattt gctgagccag cgtcggtgtg cagggcccca atctgctcgc
      421 ccgacataat ggaccccatg aaccagaaga aacgatttca gacgttgcct tgcatgccgt
      481 aaatcatcgc gggcagatgc ccatgcccgg gccaaatc
//
LOCUS       DADMIB010000432          513 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.448, whole genome shotgun sequence.
ACCESSION   DADMIB010000432 DADMIB010000000
VERSION     DADMIB010000432.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.448"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(58..161)
                     /locus_tag="JNZ89_004666"
                     /pseudo
     CDS             complement(58..161)
                     /locus_tag="JNZ89_004666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052648.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1472 domain-containing protein"
     gene            233..513
                     /locus_tag="JNZ89_004667"
                     /pseudo
     CDS             233..513
                     /locus_tag="JNZ89_004667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006322674.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          132 a          135 c          126 g          120 t
ORIGIN      
        1 cccgccagcc cggctaagat ggaggcacgg cacagcccgc acacgacgct gaggctacag
       61 agctgaaaac ccacaaggcc atgccccgca tggccgggta aagcggagcc ggcggcgact
      121 tcctttgtgc tctgtccggg accggcagga aaaaggcggg gataatgaga tggtcacccc
      181 caccctaaca gcagtacgct gttaaggtga atcccttaac ggagagacca tcatacagaa
      241 catcacactt attggtatcg atctcggaaa gcattccttc cacattcatt gtcaagacaa
      301 gtctggtaag gctcttctgc gtaaaaaatt tacccagtac taaactgatg cagtttctgg
      361 caacatgtcc gccctcagtt gttgtaatgg aagcctgtgc gggtgcacac tttttggctc
      421 gccgtatctc tgaattttgg acatgaaact aagctgattt ctccacagtt cgttcgcccg
      481 tttgtcaaaa gtaataagaa tgattttgtt gat
//
LOCUS       DADMIB010000433          511 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.449, whole genome shotgun sequence.
ACCESSION   DADMIB010000433 DADMIB010000000
VERSION     DADMIB010000433.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.449"
                     /strain="H113140272"
                     /db_xref="taxon:621"
BASE COUNT          144 a          117 c          113 g          137 t
ORIGIN      
        1 ggcctacgtg ccaatccggt acctggaaat catcatcagc gtcgatatgg acgaatataa
       61 aaacatttac gttatatccc aaaaacacac aggtcttagg gaggtttaaa ctgtgtatta
      121 acacctatcg tattgacggg cgtgaaatgg cagaaacaga agtcgttcct attgacatgc
      181 ctgactctaa cggcgagatg acttggcaag ccaaaaacta cacacagtat tcgtcctact
      241 ttatgaagat tacttgcttg aaatagctta ttggcaaatg gcatatacag ttattgaacc
      301 attctgatct tcggttgtat cgcacgcagc cgaccatgag ttattggctg atgggaatga
      361 cctggtaagc catatgtaac cagttcgtga ggtgcatatt ccgccgccac ctgtaacacg
      421 ttttccagtt ggacaagtag ctgttgctcc aggaaagcgc caacctgtgg cctgtgctgt
      481 agcaatttga agctcaccag atcctacctt t
//
LOCUS       DADMIB010000434          502 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.450, whole genome shotgun sequence.
ACCESSION   DADMIB010000434 DADMIB010000000
VERSION     DADMIB010000434.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.450"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>502)
                     /locus_tag="JNZ89_004668"
     CDS             complement(<1..>502)
                     /locus_tag="JNZ89_004668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708022.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8938254.1"
                     /translation="SEIAAAGEKAQQKSRDNLGLKSAATMEAQSDIYDRTKGRLAIPG
                     AFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSVAGPYDIIIPDTRFEGVLSIRWT
                     DARPETTEPRYRAKSLTFYGINGPIYHTRYCYWPISRLTGWVKINITTEDIIYRIVAS
                     SVRNRWG"
BASE COUNT          108 a          133 c          128 g          133 t
ORIGIN      
        1 ctccccatct gttgcggaca gagctcgcca cgattctgta aataatatct tctgtggtta
       61 tatttatttt cacccagcca gtcagtctgg atatgggcca gtagcagtag cgggtgtgat
      121 aaatggggcc gttaatgccg taaaaagtaa gggatttggc tctgtaccgc ggttctgttg
      181 tctcagggcg tgcatcagtc caccggatgc tgagcacccc ttcaaaccgt gtgtcgggta
      241 tgatgatgtc gtaggggcca gcaacggaat attcacctgg cagcgcattc cttacccagg
      301 ccaggaaatc actcttagtg tcaaaacgga taacatcttc aggcagaaaa gcacacccaa
      361 agccgaatgc gccgggtatc gccagacggc cttttgtccg gtcgtaaata tcgctctgtg
      421 cttccatcgt ggccgcactt ttcagcccca gattatcccg ggacttctgt tgtgcctttt
      481 cgcctgctgc tgcgatttct ga
//
LOCUS       DADMIB010000435          481 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.452, whole genome shotgun sequence.
ACCESSION   DADMIB010000435 DADMIB010000000
VERSION     DADMIB010000435.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..481
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.452"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(236..>481)
                     /gene="dgcZ"
                     /locus_tag="JNZ89_004669"
     CDS             complement(236..>481)
                     /gene="dgcZ"
                     /locus_tag="JNZ89_004669"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcZ"
                     /protein_id="HAY8938255.1"
                     /translation="AANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVSRAFPE
                     EPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVINRV"
BASE COUNT          127 a          116 c          100 g          138 t
ORIGIN      
        1 acaaatggga tgactaatga acggagataa tccctcacct aaccggcccc ttgttacagt
       61 tgtgtacaag gggcctgatt tttatgacgg cgaaaaaaaa ccgccagtaa accggcggtg
      121 aatgcttgca tggatagatt tgtgttttgc ttttacgcta acaggcattt tcctgcactg
      181 ataacgaatc gttgacacag tagcatcagt tttctcaatg aatgttaaac ggagcttaaa
      241 ctcggttaat cacattttgt tcgtcaataa acatacagcg atttcttccc gtttgcttac
      301 cctcatacat tgcccggtct gctcttccaa tgaccacatc cagaggctct tcaggaaatg
      361 cgcgactgac acctgctgtc acggtaatgt tgatatgccc ttcagaatgt gtgatggcat
      421 ggttatcgac taactggcaa attctgacac ctgcacgaca tgcttcttca tcattagccg
      481 c
//
LOCUS       DADMIB010000436          477 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.453, whole genome shotgun sequence.
ACCESSION   DADMIB010000436 DADMIB010000000
VERSION     DADMIB010000436.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 477)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 477)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..477
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.453"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>477
                     /locus_tag="JNZ89_004670"
     CDS             <1..>477
                     /locus_tag="JNZ89_004670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001375296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938256.1"
                     /translation="ETDIALPGPLPFILSRTYSSYRTKTPAPVGSLGPGWKMPADIRL
                     QLRDNTLILSDNGGRSLYFEHLFPGEDGYSRSESLWLVRGGVAKLDEGHRLAALWQAL
                     PEELRLSPHRYLATNSPQGPWWLLGWCERVPEADEVLPAPLPPYRVLTGLVDRFGRT"
BASE COUNT           84 a          150 c          160 g           83 t
ORIGIN      
        1 gaaaccgaca tcgccctgcc cggcccgctg ccgttcatcc tctcccgcac ctacagcagt
       61 taccggacaa aaacgcccgc gccggtgggg agcctcggcc ccggctggaa aatgcctgcg
      121 gatatccgct tacagctgcg cgataacaca ctgatactca gtgataacgg cggcagaagc
      181 ctgtattttg agcacctgtt tcccggtgag gacggttaca gccgcagcga gtcactgtgg
      241 ctggtgcgcg gcggcgtggc gaaactggat gaaggtcacc ggctggccgc actctggcag
      301 gcgctgccgg aagaactccg cttaagtccg catcgttatc tggcgacaaa cagtccgcag
      361 gggccgtggt ggctgctcgg ctggtgtgag cgggtgccgg aagcggatga ggtgctgcct
      421 gcgccgctgc cgccgtaccg ggtactgacc gggctggtgg accgcttcgg gcgcaca
//
LOCUS       DADMIB010000437          466 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.454, whole genome shotgun sequence.
ACCESSION   DADMIB010000437 DADMIB010000000
VERSION     DADMIB010000437.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 466)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.454"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            107..466
                     /locus_tag="JNZ89_004671"
                     /pseudo
     CDS             107..466
                     /locus_tag="JNZ89_004671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          121 a          115 c          110 g          120 t
ORIGIN      
        1 tttaacgtaa ggtgagagga tttttaagtg tatccataga ttaaaaatga caatgcctcc
       61 aattagttga attaggggtt ataatacccg cttttaaggt tctttcatgg tcacagttaa
      121 ctttcattgc ccccgttgcc agtccgttca ggtttaccgt cacgggcaga acccaaaagg
      181 acatgatcga ttccgttgcc gtgactgtca ccgggtgttt cagctcactt actgttacga
      241 ggcccgtaaa ccgggagtta aaaaccaaat cactgaaatg gcttcaacgg tgccggagtt
      301 cgcgatactg cccgtacgct gaaaatcggc atcaataccg tcatacggac attaaaaagc
      361 tcccgccccg gcggataaca tctgcgccag tcgctcacgc tgatgttgcc cttatctgtg
      421 aacttgatgg gcagtggagc ttcgttggca gcaaggcgca acaaca
//
LOCUS       DADMIB010000438          459 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.455, whole genome shotgun sequence.
ACCESSION   DADMIB010000438 DADMIB010000000
VERSION     DADMIB010000438.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..459
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.455"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            46..459
                     /locus_tag="JNZ89_004672"
                     /pseudo
     CDS             46..459
                     /locus_tag="JNZ89_004672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611947.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          128 a           97 c          115 g          119 t
ORIGIN      
        1 tactgcaccc attttgttgg acgatgaaat ggaatagccc ctaatatgtc aaagccaaaa
       61 tacccttttg aaaagcgcct tgaagtcgtg aatcactact tcactactga tgatggttac
      121 aggatcatct cggcacgttt tggtgtcccc gaacccaggt caggacatgg gttgccctct
      181 atgaaaaaca tggagaaaaa ggcttaattc ccaaacctaa aggtgttagt gctgatccag
      241 agttgcgtat taaggtcgtg aaagctgtga ttgagcagca catgtccctt aatcaggctg
      301 ctgctcactt tatgcttgct ggtagtggtt ctgtagccag gtggctgaag gtttatgaag
      361 agcgcggaga agctggttta cgcgcgctca agattggcac caaaagaaac attgcaatat
      421 cagttgatcc agaaaaagcg gcatcagcat tggagctgt
//
LOCUS       DADMIB010000439          451 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.456, whole genome shotgun sequence.
ACCESSION   DADMIB010000439 DADMIB010000000
VERSION     DADMIB010000439.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..451
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.456"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            7..>451
                     /locus_tag="JNZ89_004673"
     CDS             7..>451
                     /locus_tag="JNZ89_004673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY8938257.1"
                     /translation="MTKQYDVTWLFSKDGKNWYEELKNFASDTIKITYTGDGRVVWVG
                     KDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVS
                     ARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFSVITDKTS"
BASE COUNT          128 a          101 c          120 g          102 t
ORIGIN      
        1 tatcagctga caaaacaata tgatgtcacc tggctttttt cgaaagacgg aaaaaactgg
       61 tatgaagagc tgaagaattt cgccagcgac acaattaaaa taacttacac cggagacggt
      121 cgcgtggtgt gggtcggtaa ggatgtgact ggcattgaac cccgtaacgc cagtgttatt
      181 gaagttcctg atattaccgc caaccgccgc attaccgcgc cgggttactg gttttaccgc
      241 aatgatgaat ttgtctttga ctacagactc aaagcggaag atgagcgtga tgcccttctg
      301 gctcaggtca gtgcccggac aggggaatgg gaagaagacc tgctgctggg gctaatcagc
      361 gacgaagacc gggaaaaact gaaagcgtac cgcatttacg cgaaatcgct gcaggcgatg
      421 gatttcagtg tcatcactga taaaacctca t
//
LOCUS       DADMIB010000440          450 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.457, whole genome shotgun sequence.
ACCESSION   DADMIB010000440 DADMIB010000000
VERSION     DADMIB010000440.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.457"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            135..429
                     /locus_tag="JNZ89_004674"
                     /pseudo
     CDS             135..429
                     /locus_tag="JNZ89_004674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
BASE COUNT          110 a           98 c          144 g           98 t
ORIGIN      
        1 attcctgccg gtatcaacgc cgacggcatg tattgccctg aatgcggtac ggttcactgg
       61 ccggatggcg ttattccgcc tttctgatgc ttccccgttt tgccgatatt tttcagcagg
      121 gaaaccgatg gcttaactgg ctggagaagc agccggtgca gatgagccgc ctggaacatt
      181 atgccggtca ggatgaaatt ggcctgcgtt acaacagcca ccggacaaaa cgagaagaaa
      241 accttgtgat gagtggcgac gagtttatgg aaaggttctc ctggcatgtg gcggataagg
      301 ggttccggat ggtgatacgg ggtcctgagt ccggtgaagc ggcgattact ggaagatgtg
      361 gtgtacgcca taacggagac agtgagaaaa acggcgaggc aaatcacaag gagagggatg
      421 tatcagcagt gactgaaggt tgacccgctg
//
LOCUS       DADMIB010000441          445 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.458, whole genome shotgun sequence.
ACCESSION   DADMIB010000441 DADMIB010000000
VERSION     DADMIB010000441.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..445
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.458"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>445
                     /locus_tag="JNZ89_004675"
     CDS             <1..>445
                     /locus_tag="JNZ89_004675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938258.1"
                     /translation="FAGACRFVFNRALARQNENHEAGNKYIPYGKMASWLVEWKNATE
                     TQWLKDSPSQPLQQSLKDLERAYKNFFRKRAAFPRFKKRGQNDAFRYPQVKLDQENSR
                     IFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGKWYISIQTESEVSTP"
BASE COUNT          119 a          107 c          114 g          105 t
ORIGIN      
        1 ttcgcaggcg catgtcgttt cgttttcaat cgtgctctgg cacgtcagaa tgagaatcat
       61 gaggccggta ataaatacat cccttacggg aaaatggctt cctggctggt tgagtggaaa
      121 aatgccactg aaacgcaatg gcttaaagat tctccctcac agccattgca acagtcactg
      181 aaagaccttg agcgggctta caaaaacttc ttccggaagc gggctgcttt tccccgattc
      241 aaaaagcggg gacagaatga tgcattccgc tacccgcagg ttaagctcga tcaggaaaac
      301 agccgtattt ttctgccgaa actgggctgg atgcgctacc ggaatagccg tcaggtcacg
      361 ggtgttgtga aaaatgtcac tgtcagccag tcctgcggta agtggtacat cagtattcag
      421 acagaaagtg aagtatccac tccgg
//
LOCUS       DADMIB010000442          444 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.459, whole genome shotgun sequence.
ACCESSION   DADMIB010000442 DADMIB010000000
VERSION     DADMIB010000442.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..444
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.459"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(357..>444)
                     /locus_tag="JNZ89_004676"
     CDS             complement(357..>444)
                     /locus_tag="JNZ89_004676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008786105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HAY8938259.1"
                     /translation="RQMQARRVLQQMSDERLRDIGLRREDVE"
BASE COUNT          119 a          103 c           83 g          139 t
ORIGIN      
        1 ttcattgtat cctctggcag gtgtataatt agcgaattga tactagcaac gaagcttcgg
       61 ttatctattt gcagagaatt gtttcattat gaactgtgag cgcgataact aatttttgat
      121 acaaaaattt cattaatgtg atctaaaacg aatcgcttta ttcaccgctg atgattttgt
      181 tctattcctt tttgtgacag atcccccgga cgcatagatg atgaccccca gagagacagc
      241 tcaggtcatt atctgtatgt aaatcagaaa aatatgttgt aaacgacttt tatggttgga
      301 ttttgtagca attttgaatg cagacaggca gcatttgcca acacgccgcc catagttcac
      361 tccacatcct ccctgcgtaa cccgatatcc ctcaaccgtt catcactcat ctgctgtaac
      421 acccgtcggg cctgcatttg ccgc
//
LOCUS       DADMIB010000443          443 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.460, whole genome shotgun sequence.
ACCESSION   DADMIB010000443 DADMIB010000000
VERSION     DADMIB010000443.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..443
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.460"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            46..>443
                     /locus_tag="JNZ89_004677"
     CDS             46..>443
                     /locus_tag="JNZ89_004677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707257.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY8938260.1"
                     /translation="MSVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTG
                     NNGEYSFEAQVGKYCVYLKRDWRDEYCVGDIAVYDDSKPGTLNDFLTAPDEGDLKPDV
                     VKRFEEMVAQAQQSAGAAAGNAQQTAQDVAA"
BASE COUNT          108 a          105 c          136 g           94 t
ORIGIN      
        1 ctctccggaa ggttcttcct gatttaattt atcgcgagaa aaactatgtc tgtagtgata
       61 tcaggtgcgc tgactgatgg cgcaggcatc cccatgtccg gatgccagat tattctgaaa
      121 tcccgtgtaa acacctcaga agtggtgatg cgtaccaggg ctgatgtagt gaccggaaat
      181 aacggtgaat attcgtttga ggcacaggtc ggaaaatatt gcgtgtatct gaaacgggac
      241 tggcgcgacg agtactgtgt tggcgacatt gctgtatacg acgactcaaa gcccggcacg
      301 ctgaatgact ttctgactgc ccccgatgaa ggcgacctga agccggatgt cgtcaaacgc
      361 tttgaggaaa tggtggcgca ggcgcagcag agcgccgggg ccgcagccgg aaacgcacag
      421 cagacggcgc aggatgtggc ggc
//
LOCUS       DADMIB010000444          436 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.461, whole genome shotgun sequence.
ACCESSION   DADMIB010000444 DADMIB010000000
VERSION     DADMIB010000444.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.461"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..198)
                     /locus_tag="JNZ89_004678"
     CDS             complement(<1..198)
                     /locus_tag="JNZ89_004678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938261.1"
                     /translation="MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADIL
                     ATEHFSDWGYYKVNLIGGEQQI"
     gene            complement(287..>436)
                     /locus_tag="JNZ89_004679"
     CDS             complement(287..>436)
                     /locus_tag="JNZ89_004679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000151243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8938262.1"
                     /translation="AIMIMAYSVIGLISALKMPEVKDRDLSAQEDAAEDQPRVVRAAQ
                     PSRSL"
BASE COUNT          126 a           98 c           87 g          125 t
ORIGIN      
        1 aatttgctgt tcgccgccga ttaagttgac cttataatat ccccagtcac tgaaatgttc
       61 tgtagcaaga atatcggcat acacgccctg atgcgcacgg tgaaatgcac caaagcctaa
      121 atgaacaatt cttggggcca ggttattacg atcataaaca gggagtgtcg cttttgctga
      181 taacaaatta tttcccataa caattcctta aatttaaata tggcaagcta tatgttttgt
      241 tatatgaata aaaatcccct ctccggtaag agaagggatt gagggtttac agacttctgg
      301 aaggttgcgc agctcttaca acacgcggtt gatcttccgc agcgtcttcc tgcgcactta
      361 aatcacggtc tttcacctct ggcattttca gcgcagagat taaaccaatc actgaatatg
      421 ccatgatcat aatggc
//
LOCUS       DADMIB010000445          436 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.462, whole genome shotgun sequence.
ACCESSION   DADMIB010000445 DADMIB010000000
VERSION     DADMIB010000445.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..436
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.462"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..332)
                     /locus_tag="JNZ89_004680"
     CDS             complement(<1..332)
                     /locus_tag="JNZ89_004680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707670.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HAY8938263.1"
                     /translation="MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLTALALSLFTGL
                     LLVLVAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALY
                     LPFLFLPE"
BASE COUNT          139 a           95 c          103 g           99 t
ORIGIN      
        1 ctttccggta aaaataaaaa cggtaaatag agcgcaatat cggaaataac atcgccagtt
       61 tcattcaaaa tcgcccccag acgtgtttgc tgattgcact cacgcgccaa catgccatcc
      121 agcgcattga gcgccatacg gataaaaagc acgatgggca atagcaaaaa gaggatgggt
      181 tgtgccacca acaccaacag caatccggta aaaagagaaa gcgccagtgc cgtaagagtg
      241 atgtgattcg ctgtaacgtg gtgcttataa agccaaaaca tcgtcggcct taacagcgac
      301 tgaaagagcg gttttatctg gtagagcgtc atttatcatt ccgtgatatt cagtttgctc
      361 tatggtgcat caattgtgat ggcggagata tcacaacgcg gagcatcaac gtaaattcgg
      421 aatatatcaa gatgtg
//
LOCUS       DADMIB010000446          425 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.463, whole genome shotgun sequence.
ACCESSION   DADMIB010000446 DADMIB010000000
VERSION     DADMIB010000446.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..425
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.463"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..380)
                     /locus_tag="JNZ89_004681"
     CDS             complement(<1..380)
                     /locus_tag="JNZ89_004681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HAY8938264.1"
                     /translation="MFPDFFMHIGQALDLVSRYDSLRNPLTSLGDYLDPELISRCLAE
                     SGTVTLRKRRLPLEMMVWCIVGMALERKEPLHQIVNRLDIMLPGNRPFVAPSAVIQAR
                     QRLGSEAVRRVFTKTAQLWHNATP"
BASE COUNT          108 a          107 c          128 g           82 t
ORIGIN      
        1 tgcggcgtgg cgttatgcca gagctgcgct gttttcgtga acacgcggcg gacagcctca
       61 cttcccaggc gctggcgggc ctgaataacg gcactggggg caacgaaggg gcgattgccc
      121 ggcagcatga tgtccaggcg attcacaatc tggtgaagag gttctttacg ctcaagcgcc
      181 atgccaacaa tacaccagac catcatttcg aggggaagac ggcgcttgcg tagcgttaca
      241 gtacctgatt cggcaaggca acgagagatg agttcggggt cgaggtaatc ccccagagaa
      301 gtcagtgggt tacgcagaga atcgtaacgg gataccagat caagagcctg tccaatgtgc
      361 ataaaaaaat ccggaaacaa gtgagcgttt ccggattctt acacagccac tggatcggtc
      421 aactg
//
LOCUS       DADMIB010000447          422 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.464, whole genome shotgun sequence.
ACCESSION   DADMIB010000447 DADMIB010000000
VERSION     DADMIB010000447.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 422)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 422)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.464"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>422
                     /locus_tag="JNZ89_004682"
     CDS             <1..>422
                     /locus_tag="JNZ89_004682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HAY8938265.1"
                     /translation="GRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWA
                     VTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEP
                     KNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAA"
BASE COUNT          106 a           98 c          138 g           80 t
ORIGIN      
        1 ggcagagtgg ccgtgaaaga aagcaatcag cgatggtgct ctgacgggtt cgagttctgc
       61 tgtgataacg gagagagact gcgtgtcacg ttcgcgctgg actgctgtga tcgtgaggca
      121 ctgcactggg cggtgactac cggcggcttc aacagtgaaa cagtacagga cgtcatgctg
      181 ggagcggtgg aacgccgctt cggcaacgat cttccgtcgt ctccagtgga gtggctgacg
      241 gataatggtt catgctaccg ggctaatgaa acacgccagt tcgcccggat gttgggactt
      301 gaaccgaaga acacggcggt gcggagtccg gagagtaacg gaatagcaga gagcttcgtg
      361 aaaacgataa agcgtgacta catcagtatc atgcccaaac cagacgggtt aacggcagca
      421 aa
//
LOCUS       DADMIB010000448          402 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.465, whole genome shotgun sequence.
ACCESSION   DADMIB010000448 DADMIB010000000
VERSION     DADMIB010000448.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 402)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 402)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..402
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.465"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            17..397
                     /gene="leuE"
                     /locus_tag="JNZ89_004683"
     CDS             17..397
                     /gene="leuE"
                     /locus_tag="JNZ89_004683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000675823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine efflux protein LeuE"
                     /protein_id="HAY8938266.1"
                     /translation="MVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWA
                     GVATLIKTTPILFNIVRYLGAFYLLYLESKILYATLKGKNNEAKSDEPQYGAIFKRAL
                     ILSLTNPKAILFYVSFGNAANLLI"
BASE COUNT           95 a           77 c          100 g          130 t
ORIGIN      
        1 ggttggggcc atttttattg tgttggtgcc tgggccaaat accctgtttg tactcaaaaa
       61 tagcgtcagt agcggtatga aaggcggtta tcttgcggcc tgcggtgtat ttattggcga
      121 tgcagtattg atgtttctgg catgggctgg agtggcgaca ttaattaaga ccaccccgat
      181 attattcaac attgtacgtt atcttggtgc gttttatttg ctctatctgg agagtaaaat
      241 tctctacgcg accctgaagg gtaaaaataa cgaggccaaa tccgatgagc cccaatacgg
      301 ggccattttt aaacgcgcgt taattttgag cctgactaat ccgaaagcca ttttgttcta
      361 tgtgtcgttt ggtaatgctg ccaacttact gatttagtgt at
//
LOCUS       DADMIB010000449          389 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.466, whole genome shotgun sequence.
ACCESSION   DADMIB010000449 DADMIB010000000
VERSION     DADMIB010000449.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.466"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>389)
                     /gene="pilV"
                     /locus_tag="JNZ89_004684"
     CDS             complement(<1..>389)
                     /gene="pilV"
                     /locus_tag="JNZ89_004684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shufflon system plasmid conjugative transfer
                     pilus tip adhesin PilV"
                     /protein_id="HAY8938267.1"
                     /translation="AVNAQTGNFSGNVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSN
                     NGWLITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYTGGQVKGGTVRADGRLYTGE
                     YLQLERTAVAGASCSPNGLVGRDNTGA"
BASE COUNT           96 a          111 c           74 g          108 t
ORIGIN      
        1 attgcccctg tattatcgcg gcctacaagg ccgttaggcg aacatgatgc gccagcaacg
       61 gcagttcttt ccagttgtaa gtattcacca gtataaaggc gaccatcagc ccgaacagta
      121 ccgcctttca cctgaccgcc ggtatagatg cccttgttgt ttacacttcg aacccatgat
      181 ccatcggaca tataaaatcc gccaccgtga gtttcattga gccagccttt actgttacga
      241 gtaattaacc aaccattatt acttctgata tcaccgccag cggtgacatt tacgtcaaag
      301 tttccgctat tgccttttac ctgaccgctg aaagtgccat ttacaccatt cacattgccg
      361 ctgaaattac ctgtctgggc atttactgc
//
LOCUS       DADMIB010000450          386 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.467, whole genome shotgun sequence.
ACCESSION   DADMIB010000450 DADMIB010000000
VERSION     DADMIB010000450.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..386
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.467"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>386)
                     /locus_tag="JNZ89_004685"
     CDS             complement(<1..>386)
                     /locus_tag="JNZ89_004685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1-like element IS1B family transposase"
                     /protein_id="HAY8938268.1"
                     /translation="PGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFG
                     ERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQ
                     HLARLGRKSLSFSKSVELHDKVIGHYL"
BASE COUNT           82 a          126 c           93 g           85 t
ORIGIN      
        1 agataatgcc cgatgacttt gtcatgcagc tccaccgatt ttgagaacga cagcgacttc
       61 cgtcccagcc gtgccaggtg ctgcctcaga ttcaggttat gccgctcaat tcgctgcgta
      121 tatcgcttgc tgattacgtg cagctttccc ttcaggcggg attcatacag cggccagcca
      181 tccgtcatcc atatcaccac gtcaaagggt gacagcaggc tcataagacg ccccagcgtc
      241 gccatagtgc gttcaccgaa tacgtgcgca acaaccgtct tccggagcct gtcatacgcg
      301 taaaacagcc agcgctggcg cgatttagcc ccgacgtatc cccactgttc gtccatttcc
      361 gcgcagacga tgacgtcact gcccgg
//
LOCUS       DADMIB010000451          377 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.468, whole genome shotgun sequence.
ACCESSION   DADMIB010000451 DADMIB010000000
VERSION     DADMIB010000451.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.468"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>377
                     /locus_tag="JNZ89_004686"
     CDS             <1..>377
                     /locus_tag="JNZ89_004686"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308737.1"
                     /note="catalyzes a two-step reaction, first charging a
                     glutamine molecule by linking its carboxyl group to the
                     alpha-phosphate of ATP, followed by transfer of the
                     aminoacyl-adenylate to its tRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HAY8938269.1"
                     /translation="LCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKR
                     KLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTRQDNTIEMASLES
                     CIREDLNENAPRAMAVIDPVKLV"
BASE COUNT           82 a          107 c          102 g           86 t
ORIGIN      
        1 ctgtgtacgc ttgagttcca ggacaaccgt cgcctgtacg actgggtgct ggacaacatc
       61 accattcctg ttcacccgcg ccagtacgaa ttctcgcgcc tgaatctgga atacactgtg
      121 atgtccaagc gtaagctgaa cctgctggtg accgacaagc acgttgaagg ctgggatgac
      181 ccgcgtatgc cgaccatttc cggtctgcgt cgtcgtggtt acactgctgc ttctattcgt
      241 gagttctgca aacgcatcgg cgtgaccagg caggacaaca ccattgagat ggcgtcgctg
      301 gaatcctgca tccgtgaaga tctcaacgaa aacgccccgc gcgcaatggc ggttatcgat
      361 ccggtgaaac tggttat
//
LOCUS       DADMIB010000452          375 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.469, whole genome shotgun sequence.
ACCESSION   DADMIB010000452 DADMIB010000000
VERSION     DADMIB010000452.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 375)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.469"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            33..>375
                     /locus_tag="JNZ89_004687"
     CDS             33..>375
                     /locus_tag="JNZ89_004687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000454193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3330 domain-containing protein"
                     /protein_id="HAY8938270.1"
                     /translation="MEVVAEGVETPDCLAWLRQAGCDTVQGFLFARPMPAAAFVGFVN
                     QWRNTTMNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATE
                     TSVKPDACDSPP"
BASE COUNT           72 a          111 c          124 g           68 t
ORIGIN      
        1 acgttcagtg cagccgtctt ctgaaaacga caatggaggt ggtagccgag ggtgtggaaa
       61 cacccgactg ccttgcgtgg ttgcggcagg cgggttgcga cacggtgcag ggtttcctgt
      121 tcgccaggcc gatgccggcg gcggccttcg tcggcttcgt caaccaatgg aggaacacca
      181 ccatgaacgc caatgaaccg agcaccagtt gctgcgtgtg ctgcaaggaa atcccgctcg
      241 atgccgcctt cacgccggaa ggggccgagt acgtggagca tttctgcggg ctggagtgct
      301 atcagcgctt ccaggcgcgg gccagcactg cgaccgaaac cagcgtcaaa ccggacgctt
      361 gtgattcgcc gccgt
//
LOCUS       DADMIB010000453          370 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.470, whole genome shotgun sequence.
ACCESSION   DADMIB010000453 DADMIB010000000
VERSION     DADMIB010000453.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.470"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(189..296)
                     /locus_tag="JNZ89_004688"
     CDS             complement(189..296)
                     /locus_tag="JNZ89_004688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small toxic polypeptide LdrA/LdrC"
                     /protein_id="HAY8938271.1"
                     /translation="MTLAKFAMIFWHDLAAPILAGIITAAIVGWWHNRK"
BASE COUNT           81 a           96 c           92 g          101 t
ORIGIN      
        1 aagagtgcat tccggttttt caacagctgt tacagtcgtt tcatgagtgc tctggatgat
       61 gcttccagct cgggttgcca atatttactt gtggaagaga taaagacaaa aatggccgca
      121 ggctgttacc cctgcggccg gtttcgggcg catattgcca tcacggcagc ctgacgcccg
      181 ttttcacctt acttccggtt atgccaccag ccgacaatcg ctgcggtaat aatccccgcc
      241 aggatcggtg ctgccaggtc gtgccagaaa atcatggcaa acttcgcgag cgtcatatag
      301 ccgccttgtt gtaatgacaa cattttgcgg ctattcttga attgttgatg gttcaagatt
      361 agcccccgtt
//
LOCUS       DADMIB010000454          365 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.471, whole genome shotgun sequence.
ACCESSION   DADMIB010000454 DADMIB010000000
VERSION     DADMIB010000454.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.471"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..355)
                     /locus_tag="JNZ89_004689"
     CDS             complement(<1..355)
                     /locus_tag="JNZ89_004689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HAY8938272.1"
                     /translation="MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEEL
                     QYQPNKQARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQT
                     SHNPAEDLQKCESKIK"
BASE COUNT           89 a           82 c           90 g          104 t
ORIGIN      
        1 gcttaatttt gctttcacat ttttgtaagt cttctgccgg attgtgcgac gtctgcaata
       61 tcacgtcgaa accttcctct tcagctttgg cggtgatggc atgcaaaact tcagagaaaa
      121 acggattacc cgccgtagtt ttggtcgaac gggtagaaat caccataatg gcatcaaaac
      181 ccgaagaggt cagcgcgcgg gcctgcttgt ttggctgata ctgtaattct tcaatggccc
      241 gtaacacttt ttcgcgcgct tccggggaga tattagtttg cttattcagc acgcgtgata
      301 cggtggattt tgatacgcct gcaaccctgg caatatcata aatagtaggg gacataggtc
      361 aggaa
//
LOCUS       DADMIB010000455          364 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.472, whole genome shotgun sequence.
ACCESSION   DADMIB010000455 DADMIB010000000
VERSION     DADMIB010000455.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.472"
                     /strain="H113140272"
                     /db_xref="taxon:621"
BASE COUNT           81 a          104 c           85 g           94 t
ORIGIN      
        1 taaccggctc atttaaaccg tctggtctgt ttcctccggc tccacaaaaa taatgtccat
       61 cattttgaag tggacactat cgtatggaat accggacctg gatcactgaa gctttacgcc
      121 ttcatttcga agaacattta ccacgggttg tggccggacg tcgcctgggc gtaccaaaat
      181 caactgtctg tggtatgttc gtgcgcttcc gcaacgctgg cctttcatgg cctctgcccg
      241 caggtatgtc ggagcaggaa cttgatgccc ttctttacgg aagtgcctcc acagtacctg
      301 tcgtacttac tgaaagcacc gttatgccca aactcccggt ggtaaaaaaa cgtccccggc
      361 ggcc
//
LOCUS       DADMIB010000456          361 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.473, whole genome shotgun sequence.
ACCESSION   DADMIB010000456 DADMIB010000000
VERSION     DADMIB010000456.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.473"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>361
                     /locus_tag="JNZ89_004690"
     CDS             <1..>361
                     /locus_tag="JNZ89_004690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
                     /protein_id="HAY8938273.1"
                     /translation="KQTMQLSRLTLRSKKPELVEQELWGVLLAYNLVRYQMIKMAEHL
                     KGYWPNQLSFSESCGMVMRMLMTLQGASPGRIPELMRDLASMGQLVKLPTRRGRAFPR
                     VVKERPWKYPTAPKKSQS"
BASE COUNT          108 a           71 c          111 g           71 t
ORIGIN      
        1 aaacagacga tgcaactgag caggctgacg ctgagaagta aaaagccgga gcttgtggag
       61 caagagctgt ggggtgtctt actggcttat aatctggtga gatatcagat gattaaaatg
      121 gcggaacatc tgaaaggtta ctggccgaat caactgagtt tctcagaatc atgcggaatg
      181 gtgatgagaa tgctgatgac attgcagggc gcttcaccgg gacgtatacc ggagctgatg
      241 cgcgatcttg caagtatggg acaacttgtg aaattaccga cgagaagggg aagggccttc
      301 ccgagagtgg taaaggagag gccctggaaa taccccacag ccccgaaaaa gagccagtca
      361 g
//
LOCUS       DADMIB010000457          339 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.474, whole genome shotgun sequence.
ACCESSION   DADMIB010000457 DADMIB010000000
VERSION     DADMIB010000457.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.474"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>339
                     /locus_tag="JNZ89_004691"
     CDS             <1..>339
                     /locus_tag="JNZ89_004691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HAY8938274.1"
                     /translation="FGIHGALALTALDNGIMTLWALENIATYQQYGSVEAALAAGKTF
                     HIWAKPMLDSFIFLGGSGATLGLILAIFIASRRADYRQVAKLALPSGIFQINEPILFG
                     LPIIMNPVMF"
BASE COUNT           63 a           91 c           93 g           92 t
ORIGIN      
        1 tcttcggtat tcatggcgcg ctggcgctga ccgcactgga caacggcatt atgacgctgt
       61 gggcgctgga aaatatcgcg acctatcagc aatatggttc cgtcgaagcg gcgctggcag
      121 ccggtaagac cttccatatc tgggccaagc cgatgctgga ctcctttatt ttccttgggg
      181 gcagtggtgc gactttaggc ctgatcctgg ctatctttat cgcctctcgc cgtgctgatt
      241 atcgtcaggt ggcaaaactg gcgctgccgt ccggcatctt ccagattaac gaaccgattc
      301 tgtttggtct gccaattatc atgaacccgg tgatgttta
//
LOCUS       DADMIB010000458          331 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.475, whole genome shotgun sequence.
ACCESSION   DADMIB010000458 DADMIB010000000
VERSION     DADMIB010000458.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.475"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            178..>331
                     /locus_tag="JNZ89_004692"
     CDS             178..>331
                     /locus_tag="JNZ89_004692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000820618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY8938275.1"
                     /translation="MKRHNQRLKIISEYFGGVPVKNIGIREVYSFLEIRAAGSKFAIA
                     NQYRALL"
BASE COUNT          124 a           48 c           74 g           85 t
ORIGIN      
        1 atcggaagag acaaaagaat tgcagttaat gaggctattg cggcaaatat ggaattatta
       61 tccacgcaac atataagctt actggataga ataaaaggta atagcgtaac attattctgc
      121 gagctgatat taaatttcag aaatgaaata gagcgtagac aattaagcac aaacaccatg
      181 aaaagacaca accagaggtt gaaaatcata agtgaatact ttggtggtgt tccggttaaa
      241 aatataggca taagggaggt gtacagcttt cttgaaatca gagcagctgg gagtaaattt
      301 gctattgcta accagtacag ggcgctttta t
//
LOCUS       DADMIB010000459          329 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.476, whole genome shotgun sequence.
ACCESSION   DADMIB010000459 DADMIB010000000
VERSION     DADMIB010000459.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..329
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.476"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>329)
                     /locus_tag="JNZ89_004693"
     CDS             complement(<1..>329)
                     /locus_tag="JNZ89_004693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938276.1"
                     /translation="LLFLYINKDNIKVIYSLKINQTTPGILVSCDSNNNFACQTTMTE
                     DVIQRITTFFHTSPDVKNREIKLEWSGDKRDLPTAEAEISRVQASIIKWYASEYHNGR
                     QVLDEIQ"
BASE COUNT           85 a           66 c           59 g          119 t
ORIGIN      
        1 atttgtatct catcgagaac ttgcctgcca ttatggtatt ctgacgcata ccatttgata
       61 atagacgcct gcacgcgaga tatttccgct tcagcagttg gtaaatctct cttatctcct
      121 gaccattcca gctttatttc tctgttcttg acatctgggc tggtgtgaaa aaatgtagta
      181 attcgctgta taacatcttc agtcattgtg gtctgacagg caaaattatt attgctatca
      241 cagctaacaa gtatacctgg cgttgtctgg tttattttta ggctgtaaat cacttttata
      301 ttgtctttat tgatatacag aaacaacag
//
LOCUS       DADMIB010000460          326 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.477, whole genome shotgun sequence.
ACCESSION   DADMIB010000460 DADMIB010000000
VERSION     DADMIB010000460.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.477"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>326
                     /locus_tag="JNZ89_004694"
     CDS             <1..>326
                     /locus_tag="JNZ89_004694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY8938277.1"
                     /translation="EYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACML
                     GGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMD
                     PKRMIEA"
BASE COUNT           74 a           85 c           97 g           70 t
ORIGIN      
        1 gaatatccgc aatccgcagc catcgacctg cgttgcgtaa atatggttgc cgatctgtgg
       61 catgcgcctg cgccgaaaaa tggtcaggcc gttggcacca acaccattgg ttcttccgag
      121 gcctgtatgc tcggcgggat ggcgatgaaa tggcgttggc gcaagcgtat ggaagctgca
      181 ggcaaaccaa cggataaacc aaacctggtg tgcggtccgg tacaaatctg ctggcataaa
      241 ttcgcccgct actgggatgt ggagctgcgt gagatcccta tgcgccccgg tcagttgttt
      301 atggacccga aacgcatgat tgaagc
//
LOCUS       DADMIB010000461          320 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.478, whole genome shotgun sequence.
ACCESSION   DADMIB010000461 DADMIB010000000
VERSION     DADMIB010000461.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..320
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.478"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>320)
                     /locus_tag="JNZ89_004695"
     CDS             complement(<1..>320)
                     /locus_tag="JNZ89_004695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="RHS Repeat family protein"
                     /protein_id="HAY8938278.1"
                     /translation="DGAGRHFQLVLTTQAQRAEEARQQAISGGTEPSAFPDTLPGYTE
                     YGRDNGIRLSAVWLTHDPEYPENLPAAPLVRYGWTPRGELAAVYDRSNTQVRSFTYDD
                     KYRG"
BASE COUNT           56 a          103 c           98 g           63 t
ORIGIN      
        1 gccccggtat ttatcatcgt aagtaaagct acgcacctgt gtattgctgc ggtcatacac
       61 tgccgccagt tcgccgcgcg gcgtccagcc atagcgcacc agcggcgcgg caggtaaatt
      121 ctccgggtat tccgggtcgt gcgtcagcca cacggcagac agacggatgc cgttgtcccg
      181 gccatattcg gtgtaacccg gcagggtatc aggaaaagcg gacggttccg tcccgccgga
      241 aatggcctgc tgccgggctt cttctgcccg ctgcgcctgc gtggtcagta ccagttggaa
      301 gtgacgcccg gcaccatccg
//
LOCUS       DADMIB010000462          318 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.479, whole genome shotgun sequence.
ACCESSION   DADMIB010000462 DADMIB010000000
VERSION     DADMIB010000462.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..318
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.479"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..>318
                     /locus_tag="JNZ89_004696"
     CDS             <1..>318
                     /locus_tag="JNZ89_004696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706235.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938279.1"
                     /translation="YPALVGNDIGCGMALWQTDILARKYNADKFEKRLSDLDDVAEES
                     WLEENLPSAFAQHPWCSSLGSIGGGNHFAELQQVDQIINAELFALAGLDAQHLQLLVH
                     SGS"
BASE COUNT           80 a           76 c           83 g           79 t
ORIGIN      
        1 tttatccggc actggtcggc aatgatatcg gctgcggtat ggcgctatgg caaacagata
       61 ttctcgctcg caaatacaac gccgataagt ttgaaaagcg attatcagat ctggatgacg
      121 ttgctgaaga aagctggctg gaggaaaacc tgccgtcagc atttgcacag catccgtggt
      181 gcagctcgct tggctctatc ggtggcggca atcatttcgc tgaactgcaa caagttgatc
      241 aaatcatcaa cgctgaactg tttgcactag caggtctgga tgcacaacat ctgcaactgt
      301 tggttcatag cggctcgc
//
LOCUS       DADMIB010000463          315 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.denovo.480, whole genome shotgun sequence.
ACCESSION   DADMIB010000463 DADMIB010000000
VERSION     DADMIB010000463.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..315
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.denovo.480"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(<1..>315)
                     /locus_tag="JNZ89_004697"
     rRNA            complement(<1..>315)
                     /locus_tag="JNZ89_004697"
                     /product="23S ribosomal RNA"
BASE COUNT           70 a          106 c           72 g           67 t
ORIGIN      
        1 ttcagcactt atctcttccg catttagcta ccgggcagtg ccattggcat gacaacccga
       61 acaccagtga tgcgtccact ccggtcctct cgtactagga gcagcccccc tcagttctcc
      121 agcgcccacg gcagataggg accgaactgt ctcacgacgt tctaaaccca gctcgcgtac
      181 cactttaaat ggcgaacagc catacccttg ggacctactt cagccccagg atgtgatgag
      241 ccgacatcga ggtgccaaac accgccgtcg atatgaactc ttgggcggta tcagcctgtt
      301 atccccggag tacct
//
LOCUS       DADMIB010000464        11105 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.141, whole genome shotgun sequence.
ACCESSION   DADMIB010000464 DADMIB010000000
VERSION     DADMIB010000464.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11105
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.141"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            complement(37..603)
                     /locus_tag="JNZ89_004698"
                     /pseudo
     CDS             complement(37..603)
                     /locus_tag="JNZ89_004698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
     gene            complement(822..1799)
                     /gene="epmA"
                     /locus_tag="JNZ89_004699"
     CDS             complement(822..1799)
                     /gene="epmA"
                     /locus_tag="JNZ89_004699"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HAY8938280.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            2124..3932
                     /gene="frdA"
                     /locus_tag="JNZ89_004700"
     CDS             2124..3932
                     /gene="frdA"
                     /locus_tag="JNZ89_004700"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HAY8938281.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRMAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3925..4659
                     /locus_tag="JNZ89_004701"
     CDS             3925..4659
                     /locus_tag="JNZ89_004701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HAY8938282.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4670..5065
                     /gene="frdC"
                     /locus_tag="JNZ89_004702"
     CDS             4670..5065
                     /gene="frdC"
                     /locus_tag="JNZ89_004702"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HAY8938283.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPDAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            5076..5435
                     /gene="frdD"
                     /locus_tag="JNZ89_004703"
     CDS             5076..5435
                     /gene="frdD"
                     /locus_tag="JNZ89_004703"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HAY8938284.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5498..6631
                     /gene="blaEC"
                     /locus_tag="JNZ89_004704"
     CDS             5498..6631
                     /gene="blaEC"
                     /locus_tag="JNZ89_004704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HAY8938285.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6720..7170
                     /locus_tag="JNZ89_004705"
                     /pseudo
     CDS             6720..7170
                     /locus_tag="JNZ89_004705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7167..7484)
                     /locus_tag="JNZ89_004706"
     CDS             complement(7167..7484)
                     /locus_tag="JNZ89_004706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound-resistance protein
                     SugE"
                     /protein_id="HAY8938286.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7666..7812)
                     /gene="ecnB"
                     /locus_tag="JNZ89_004707"
     CDS             complement(7666..7812)
                     /gene="ecnB"
                     /locus_tag="JNZ89_004707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HAY8938287.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7923..8048)
                     /gene="ecnA"
                     /locus_tag="JNZ89_004708"
     CDS             complement(7923..8048)
                     /gene="ecnA"
                     /locus_tag="JNZ89_004708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HAY8938288.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(8100..8666)
                     /gene="efp"
                     /locus_tag="JNZ89_004709"
     CDS             complement(8100..8666)
                     /gene="efp"
                     /locus_tag="JNZ89_004709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HAY8938289.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8708..9757
                     /gene="epmB"
                     /locus_tag="JNZ89_004710"
     CDS             8708..9757
                     /gene="epmB"
                     /locus_tag="JNZ89_004710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HAY8938290.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            10131..11000
                     /locus_tag="JNZ89_004711"
     CDS             10131..11000
                     /locus_tag="JNZ89_004711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938291.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGSLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPSKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
BASE COUNT         2913 a         2804 c         2766 g         2622 t
ORIGIN      
        1 atcatacact aaatcagtaa gttggcagca ttacccgaaa tgcccaccat ttaataacaa
       61 aatagtaatg cttactaaca gcaatactaa attcagacac attactgcaa taccgcccac
      121 cgcagtaatg cgggcaattt tattaatccc ctttgaagca acgacggtga ccagaatcat
      181 ccatgctact gccagcagac caaccacctg cgtaggctcc agtccggcaa tacgccagtg
      241 ctgggtcatg tcgctaccat agaggaatgt tgagaacggt acccaaactt tcgcggaggt
      301 actcaccatc cagatgatat aagaggaaaa ccacataaac gtaccaatga aggcaaaacg
      361 tggtccgaca ctattattca tccaggaata gataccacct tcttctttgc gataagcagc
      421 tcccatttca gccatcatta aggcgaatgg aataaagaat aacaatgcag aaaatatata
      481 aaagggaatc gcactataac ccattaagta ataagccgat gggctattgg caaatccaaa
      541 tacggaagta aagatcatca atatgagtcc tatcagactc atctttttta tcgtgtgagg
      601 catgaaacca tccttcattt cagcgcgtgt ataacacgtg cccactgaac tgcactgcgc
      661 aacattgagc aggcagcgta aaaaccaata cagaattgat acccggatga tatcaaatat
      721 ccagtcttaa attgtggcct ttaacggaaa aatgaaaaca tatgctacag aatggcgctt
      781 atcacgccat tcttcgctgt taattcagta atttttcaga attatgcccg gtcaacgcta
      841 aaggcgatga cttcagccag tgtctccgcg cccagcgcca acatcaccag acgatcaaca
      901 cctaatgcca cgccggaaca gtcaggcata ccgactttca aggcttcaat cagattctgg
      961 tcaatggggt gctgcggcaa accgcgcgcc gcgcgcttac ggttatcttg ttcaaagcgt
     1021 tgttgctgct cacgggcatc cgttaattca tggaaaccat tcgccagctc aataccttta
     1081 taataaacct caaagcgttc agcgacccga tgatcttcgg tactgatttg cgccagtgat
     1141 gcctggctgg ctggaaagtg gtacacaaag gtcggttttt ctttgccaat atttggctct
     1201 acgccaaagg taaacagcaa ttgtagcaac gtgtcgcggt cttcttcggt atcagcaacg
     1261 ttactcaaat ccagtttcgc tgcgacttcc cgcagttgcg ttttgtcggc agagagcggg
     1321 tcaatttcca gataacgcaa gaaagcttgt tgataagaaa ggctttctgc tgccgggcag
     1381 tccagcacct gttgtaagag atcgtccacc tcgttcatca accggtacat atcatagtgc
     1441 ggtcgatacc actcaagcat agtgaactca gggttgtgat aacgccccat ctcttcatta
     1501 cggaagctgc ggcacagctg gaataccggc ccacaaccgg caaccagcag gcgtttcata
     1561 tggtattccg ggctggtcat taaccagaga ttcatcccct gcgaatgccc ggggccaacg
     1621 aaacgtgtct caaacgggac caaatgaata tcggttaccg tcgcctggct catacaaggc
     1681 gtctccacct ccagcactcc acgatcagca aagaaacgac ggatctccgc cataatcgcc
     1741 gcgcgtttta ataagttagg aatggatgcg ctcggctgcc aggatgccgt ttcgctcata
     1801 gttaaatctc cagtttttga caagggcacg aagtctactc gcaacgcgac ggcgagacaa
     1861 attttacgca ggaatcaaac agcggtgggc agtgactaaa aaaagcacga tctgatggtt
     1921 tagtaattaa attaatcatc ttcagtgata atttagccct cttgcgcact aaaaaaatcg
     1981 atctcgtcaa atttcagact tatccatcag actatactgt tgtacctata aaggagcagt
     2041 ggaatagcgt tcgcagaccg taactttcag gcacttaccc tgaagtacgg ggctgtggga
     2101 taaaaacaat ctggaggaat gtcgtgcaaa cctttcaagc cgatcttgcc attgtaggcg
     2161 ccggtggcgc gggattacgt gctgcaattg ctgccgcgca ggcaaatcca aatgcaaaaa
     2221 tcgcactaat ctcaaaagta tacccgatgc gtagccatac cgttgctgca gaagggggct
     2281 ccgccgctgt cgcgcaggat catgacagct tcgaatatca ctttcacgat acagtagcgg
     2341 gtggcgactg gttgtgtgag caggatgtcg tggattattt cgtccaccac tgcccaaccg
     2401 aaatgaccca actggaactg tgggggtgcc catggagccg tcgcccggat ggtagcgtca
     2461 acgtacgtcg cttcggcggc atgaaaatcg agcgcacctg gttcgccgcc gataagaccg
     2521 gcttccatat gctgcacacg ctgttccaga cctctctgca attcccgcag atccagcgtt
     2581 ttgacgaaca tttcgtgctg gatattctgg ttgatgatgg tcatgttcgc ggcctggtag
     2641 caatgaacat gatggaaggc acgctggtgc agatccgtgc taacgcggtc gttatggcta
     2701 ctggcggtgc gggtcgcgtt tatcgttaca acaccaacgg cggcatcgtt accggtgacg
     2761 gtatgggtat ggcgctaagc cacggcgttc cgctgcgtga catggaattc gttcagtatc
     2821 acccaaccgg tctgccaggt tccggtatcc tgatgaccga aggctgccgt ggtgaaggcg
     2881 gtattctggt caacaaaaat ggctaccgtt atctgcaaga ttacggcatg ggcccggaaa
     2941 ctccgctggg cgagccgaaa aacaaatata tggaactggg tccacgcgac aaagtttctc
     3001 aggccttctg gcacgaatgg cgtaaaggca acaccatctc cacgccgcgt ggcgatgtgg
     3061 tttatctcga cttgcgtcac ctcggcgaga aaaaactgca tgaacgtctg ccgttcatct
     3121 gcgaactggc gaaagcgtac gttggcgtcg atccggttaa agaaccgatt ccggtacgtc
     3181 cgaccgcaca ctacaccatg ggcggtatcg aaaccgatca gaactgtgaa acccgcatta
     3241 aaggtctgtt cgccgtgggt gaatgttcct ctgttggtct gcacggtgca aaccgtctgg
     3301 gctccaactc cctggcggaa ctggtggtct tcggccgtat ggccggtgaa caagcgacag
     3361 agcgtgcagc aactgccggt aatggcaacg aagaggcaat tgaagcgcag gcagctggcg
     3421 ttgaacaacg tctgaaagat ctggttaacc aggatggcgg cgaaaactgg gcgaagatcc
     3481 gcgacgaaat gggcctagca atggaagaag gttgcggtat ctaccgtacg ccggaactga
     3541 tgcagaaaac catcgacaag ctggcagagc tgcaggaacg cttcaagcgc gtgcgcatca
     3601 ccgacacctc cagcgtgttc aacaccgacc tgctctacac cattgaactg ggccacggtc
     3661 tgaacgttgc tgaatgtatg gcgcactccg caatggcacg taaagagtcc cgcggcgcac
     3721 accagcgtct ggacgaaggt tgcaccgagc gtgacgacgt caacttcctc aaacacaccc
     3781 tcgccttccg cgatgctgat ggcacgactc gcctggagta cagcgacgtg aagattacta
     3841 cgctgccgcc agctaaacgc gtttacggtg gcgaagcgga tgcagccgat aaggcggaag
     3901 cagccaataa gaaggagaag gcgaatggct gagatgaaaa acctgaaaat tgaggtggtg
     3961 cgctataacc cggaagtcga taccgcaccg catagcgcat tctatgaagt gccttatgac
     4021 gcaactacct cattactgga tgcgctgggc tacatcaaag acaacctggc accggacctg
     4081 agttaccgct ggtcctgccg tatggcgatt tgtggttcct gcggcatgat ggttaacaac
     4141 gtgccaaaac tggcatgtaa aaccttcctg cgtgattaca ccgacggtat gaaggttgaa
     4201 gcgttagcta acttcccgat tgaacgcgat ctggtggtcg atatgaccca cttcatcgaa
     4261 agtctggaag cgatcaaacc gtacatcatc ggcaactccc gcaccgcgga tcagggtact
     4321 aacatccaga ccccggcgca gatggcaaag tatcaccagt tctccggttg catcaactgt
     4381 ggtctgtgct acgccgcgtg cccgcagttt ggcctgaacc cagagttcat cggtccggct
     4441 gccattacgc tggcgcatcg ttataacgaa gatagccgcg accacggtaa gaaggagcgt
     4501 atggcgcagt tgaacagcca gaacggcgta tggagctgta ctttcgtggg ctattgctcc
     4561 gaagtctgcc cgaaacacgt cgatccggct gcggccattc agcagggcaa agtagaaagt
     4621 tcgaaagact ttcttatcgc gaccctgaaa ccacgctaag gagtgcaaca tgacgactaa
     4681 acgtaaaccg tatgtacggc caatgacgtc cacctggtgg aaaaaattgc cgttttatcg
     4741 cttttacatg ctgcgcgaag gcacggcggt tccggctgtg tggttcagca ttgaactgat
     4801 tttcgggctg tttgccctga aaaatggccc ggacgcctgg gcgggattcg tcgacttttt
     4861 acaaaacccg gttatcgtga tcattaacct gatcactctg gcggcagctc tgctgcacac
     4921 caaaacctgg tttgaactgg caccgaaagc ggccaatatc attgtaaaag acgaaaaaat
     4981 gggaccagag ccaattatca aaagtctctg ggcggtaact gtggttgcca ccatcgtaat
     5041 cctgtttgtt gccctgtact ggtaaggagc ctgagatgat taatccaaat ccaaagcgtt
     5101 ctgacgaacc ggtattctgg ggcctcttcg gggccggtgg tatgtggagc gcaattattg
     5161 cgccggtgat gatcctgctg gtgggtattc tgctgccact ggggctgttt ccgggtgatg
     5221 cgctgagcta cgagcgcgtt ctggcgttcg cgcagagctt cattggtcgc gtattcctgt
     5281 tcctgatgat cgttctgccg ctgtggtgtg gtttacaccg tatgcaccac gcgatgcacg
     5341 atctgaaaat tcacgtgcct gcgggcaaat gggttttcta cggtctggct gctatcctga
     5401 cagttgtcac gctgattggt atcgttacaa tctaacgtat cgccaatgta aatccggccc
     5461 gcctatggcg ggccgttttg tatggaaacc agaccttatg ttcaaaacga cgctctgcgc
     5521 cttattaatt accgcctctt gctccacatt tgctgcccct caacaaatca acgatattgt
     5581 gcatcgcaca attaccccgc ttatagagca acaaaagatc cccggtatgg cggtggcggt
     5641 aatttatcag ggtaaacctt attactttac ctggggctat gcggacatcg ccaaaaagca
     5701 gcccgtcaca cagcaaacgt tgtttgagtt aggttcggtc agcaaaacat ttacgggcgt
     5761 gcttggtggc gatgctattg ctcgagggga aatcaagtta agcgatcccg caacaaaata
     5821 ctggcctgaa cttaccgcta aacagtggaa tgggatcaca ctattacatc ttgcgaccta
     5881 caccgctggc ggcctgccat tgcagatgcc ggatgaagtg aaatcctcaa gcgacttgct
     5941 gcgcttctat caaaactggc agcctgcatg ggctccagga acacaacgtc tgtatgccaa
     6001 ctccagtatc ggtttgttcg gcgcactggc tgtgaagccg tctggtttga gttttgagca
     6061 ggcgatgcaa actcgtgtct tccagccact caaactcaac catacgtgga ttaatgtacc
     6121 gcccgcagaa gaaaagaatt acgcctgggg atatcgcgaa ggcaaggcag ttcatgtttc
     6181 gccaggggcg ttagatgctg aagcttatgg tgtgaagtcg accattgaag atatggcccg
     6241 ctgggtgcaa agcaatttaa ccccccttga tatcaatgag aaaacgcttc aacaagggat
     6301 acaactggca caatctcgct actggcaaac cggcgatatg tatcagggcc tgggctggga
     6361 aatgctggac tggccggtca atcctgacag catcattaac ggcagtgaca ataaaattgc
     6421 actggcagca cgcccggtaa aagcgattaa gcccccaact cctgcagtac gcgcatcatg
     6481 ggtacataaa acgggggcga ccggcggatt tggtagctat gtcgcgttta ttccagaaaa
     6541 agagctgggt atcgtgatgc tggctaacaa aaactatccc aatccagcga gagtcgccgc
     6601 cgcctgtcag attctcaacg ctctacagta aaatttcatc gggtccgaat tttcggacct
     6661 tttctgcgct tttccttgct gtcatctaca cttagaaaaa aaccagtaag gaaacattta
     6721 tgcgcctgct ccctctcgtt gccgcagcga cagctgcatt tctggtcgtt gcctgcagtt
     6781 ctcctacgcc gccgcgtggc gtgacagtgg tgaataattt cgacgctaaa cgctatctcg
     6841 gtacctggta tgagattgcc cgttttgatc accgttttga acgtggactg gaaaaagtca
     6901 ccgcaacata cagtctgcgt gatggcggcg gcctgaatgt catcaataaa ggctataacc
     6961 ctgacagaga aatgtggcag cagagtgaag ggaaagcgta ctttaccggc gcaccaacac
     7021 gcgctgcgct gaaagtgtca ttctttggtc ctttctatgg cggttataac gtcattgcac
     7081 ttgatcggga ataccgccat gcgctggttt gcggcccggg aagggtttga tgtcagtaag
     7141 tttatttggg tacagcagcc cggtagttag tgagtgctga gtttcagacc aataatcccc
     7201 aatacgatta acgccagact cgccaggcgc atcgggttag cggactcacc gagcagcaca
     7261 atgccggtga tagccgcgcc gactgcgcca atacccgtcc acacggcata agccgtccct
     7321 actggtaacg atttcatcgc ccaggcaagt agcgccatac tgacaatcat cgccgtcacg
     7381 gtaataacac tcggcgtcaa acgactaaag ccgtgggtat atttcaggcc aacggcccat
     7441 accacttcca gcagaccagc aataactaag ataatccagg acatatcagg ctccggagaa
     7501 ttggggccgt ccccggtgaa aagacgcgtt tgcaggtcgt cctgcaaagc tgatggttga
     7561 acggatattt tgccaggtgg caggggaatt tcaactatta ccttagtgac tatcgcagaa
     7621 aaaacaaacg gcacgacaca gctgtcgtac cgttattgct tattgctatt gctgcgcttt
     7681 cgttgctgcg ccagaaatcg cgttaccgcc atcagaaatg tcttcaccaa cgccacgcgt
     7741 ggtgttgcag gcagttaata ctgttgaaag caccagaaca gaaaagatcg ctgcaattgt
     7801 cttcttcacc ataacgtctt ccttttaggt aatgttattt atgtttgcct atagcaaatt
     7861 aataatagac aacatcgcca aaaatgacgg aaatctgatg atttttcgga agagaagaaa
     7921 aattagctgg cagcgcgaga gatggagttg ccgagatgtt tgatgtcttc gccgaaaccg
     7981 cgagcggtgt tacagcccgt gagcagcgta ctggcaagca aaacaagaac gataaggcgt
     8041 ttcatcatct ctgacctgaa taagtgatgg tgcagcctgc aggccgcacc acaaccgcat
     8101 tacttcacgc gagagacgta ttcaccagag cgggtatcca ctttgatgac ttcgccgatt
     8161 tgtacgaaca gcggaacctt aaccacagcg ccagtagaca gggtagccgg tttgccgcca
     8221 gtacctgcgg tatcaccttt caggcccgga tcggtatcaa cgatttccag ttcaacgaag
     8281 ttcggcggag taacggagat cggctgacca ttccacagag ttacgataca ctctgcctga
     8341 tccagcagcc atttagcgtt atcgccaatt gcttttgcat cagcagacag ctgctcgaaa
     8401 gtttcgttgt tcatgaagtg ccagaactca ccgtcgttgt acaggtaagt caggttcata
     8461 tcgacaacat cagcgccttc agcggaatca gtagatttga aggttttttc tacgcgagta
     8521 ccggtcagca gacgacgcag tttaacgcga gcaaatgcct ggcctttacc cggttttacg
     8581 aattcactcg cttcaaccgc gtaaggttcg ccgtctaaca tgattttaag accagcacga
     8641 aaatcgttgc tatagtacgt tgccataagg ccctctgaaa tttgttaatt ggtagctaag
     8701 ccacaaaatg gcgcatattg taaccctaaa taccccatcc agagaagatt ggttaacgca
     8761 acttgccgat gttgtgaccg atcctgatga acttctgcgt cttttgaata tagacgcgga
     8821 cgaaaaactg ttggccggac gcagcgccaa aaagctgttt gccctgcgtg tgccccgctc
     8881 atttatcgat cgcatggaga aaggcaatcc ggacgatcct cttttgcgtc aggtacttac
     8941 ctcgcaagat gagtttgtcg tcgcgtccgg attctccacc gacccactgg aagaacagca
     9001 cagcgtagtg cctggtttgt tgcataaata ccacaaccgg gcgcttttgc tggtcaaagg
     9061 cggctgcgcg gtaaattgcc gctattgctt ccgtcgccac ttcccctatg ccgaaaatca
     9121 gggcaacaag cgtaactggc agactgcact tgagtatgtt gctgcgcatc cggaactgga
     9181 cgagatgatt ttctccggcg gcgatccgct gatggcgaaa gatcacgagc tggactggtt
     9241 gctcacacaa ctggaagcca tcccgcatat caaacgtctg cggattcaca gccgtctgcc
     9301 gattgtgatc ccggcacgca tcacagatgc gctggttgaa cgcttttcac attctacgct
     9361 gcaaatcctg ctggtgaatc acatcaacca tgccaatgag atagatgaaa cattccgtca
     9421 ggcgatggct aagttgcgcc gggtaggcgt tactttgctg aaccagagcg ttctgttacg
     9481 tgatgtgaac gataacgcac aaacgctggc aaacctgagt aatgcgttgt tcgatgccgg
     9541 cgtgatgccg tattacctgc atgtgctcga taaagtacag ggcgcagcgc attttatggt
     9601 gagtgatgac gaagcacggc agattatgcg tgagttgctg acattggtgt cgggatatct
     9661 ggtgccgaaa ctggcgcgag aaattggcgg cgaacccagc aaaacgccgc tggatctcca
     9721 gctacgccag cagttactga ttaaacaggg aagttaaaca ttaaaattgc ctgatgcgct
     9781 acgcttatca ggcctacatc gtgcattgaa attgaatgga tttgcaatga actgtaggcc
     9841 ggataaggcg tttacgccgc atccggcaag agcaacaaac gcaagtacag caacctgtca
     9901 ttaaactgag aaatttaatc tttgcccgtt gcataacctt taattattca tatgcattgc
     9961 tgttgttact ttttatatag ctaacaccaa taattaacct ttcttttctg tttatataga
    10021 gtgagcacgg ctatttatgt tattttaaca actattacta ccaagcccat ttatctggct
    10081 tataaattaa aattaattat ttaattgaga aatggttagg gagaacctac atggccataa
    10141 gcatcaaggg tgttaatacc ggtgttattc gcaagagtaa taatttcatt gcactggcgc
    10201 tgaaaattaa agaacctcgc aataaagaat cgttgttctt tatgtctgtc atggaactgc
    10261 gcgacctgct gattgcgctg gaaagtcgtc tgcatcaaaa gcataaactg gatgctgctg
    10321 cacgccttca gtatgagcaa gctcgcgata aagtcattaa gaaaatggca gaaaacatcc
    10381 cagaaattct ggttgatgag cttaaaaatg ccgatattaa tcgtcgggtt aacacgctgg
    10441 aacttaccga taatcaaggc gaaaatctta ccttcgtatt aacgctacat gacggtagca
    10501 aatgtgagtt agtcgtcaat gagttgcaga ttgaaatgct agcgcgagca atcattcatg
    10561 caattaataa tgcggaaatg cgtgaactgg cattacgtat tacctcactg ttagatttcc
    10621 tgccgttata tgacgttgac tgccaggaaa atggcagtct ggaatatgac acctattccc
    10681 aaccggaatg gaaacataac ttgttcgacc attatctggc ggtgctttac cgctttaaag
    10741 atgaaagtgg caaagaacaa tttagcggcg cagtggtgaa aacgcgtgaa gcaacgccga
    10801 gtaaagaagt agaggcgatc actcgccgaa tgcttgattt cagcccacga ctgaaaaaac
    10861 tcgcgggtgt gccatgtcag gtctatgttc gcaccgtagc ggcgaataac gcccaaccgc
    10921 taacccagga tcaatgctta cgcgcgctgc atcacttacg tgttcaatcc accagcaaaa
    10981 ctgcaccaca ggcgaaataa tctcatcttt gctaatgcga ggctggagcc atccagcctg
    11041 aaatgactga taacgtgatc gttggtcatg ccggatgcgg cgtaaacgcc ttatccggcc
    11101 tacaa
//
LOCUS       DADMIB010000465        10233 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.155, whole genome shotgun sequence.
ACCESSION   DADMIB010000465 DADMIB010000000
VERSION     DADMIB010000465.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10233
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.155"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..651
                     /locus_tag="JNZ89_004712"
     CDS             <1..651
                     /locus_tag="JNZ89_004712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA ligase RtcB family protein"
                     /protein_id="HAY8938292.1"
                     /translation="HPIIRGTNKVTGQSILQRHIASFSHHGLPQGSDDALRYIAEHDD
                     ALAFACINRQMIALRIMQQVKATGSPVLDVAHNFVSACQIGDQQGWLHRKGATPDDNG
                     LVIIPGSRGDYSWIVQPVANEKTLHSLAHGAGRKWGRTECKWRLAAKYTVTQLSRTEL
                     GSRIICRDKQLIFEEAPQAYKSAESVVQCLVQAGLIIPVARLRPVLTLKNSGGKKG"
     gene            648..1262
                     /locus_tag="JNZ89_004713"
     CDS             648..1262
                     /locus_tag="JNZ89_004713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY8938293.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1319..2776)
                     /gene="pepD"
                     /locus_tag="JNZ89_004714"
     CDS             complement(1319..2776)
                     /gene="pepD"
                     /locus_tag="JNZ89_004714"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY8938294.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3037..3495
                     /gene="gpt"
                     /locus_tag="JNZ89_004715"
     CDS             3037..3495
                     /gene="gpt"
                     /locus_tag="JNZ89_004715"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY8938295.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3587..4831
                     /gene="frsA"
                     /locus_tag="JNZ89_004716"
     CDS             3587..4831
                     /gene="frsA"
                     /locus_tag="JNZ89_004716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HAY8938296.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIVMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            4889..5290
                     /locus_tag="JNZ89_004717"
     CDS             4889..5290
                     /locus_tag="JNZ89_004717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HAY8938297.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5329..6384)
                     /gene="phoE"
                     /locus_tag="JNZ89_004718"
     CDS             complement(5329..6384)
                     /gene="phoE"
                     /locus_tag="JNZ89_004718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HAY8938298.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGGEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAIGMTYQF"
     gene            6672..7775
                     /gene="proB"
                     /locus_tag="JNZ89_004719"
     CDS             6672..7775
                     /gene="proB"
                     /locus_tag="JNZ89_004719"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HAY8938299.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7787..9040
                     /gene="proA"
                     /locus_tag="JNZ89_004720"
     CDS             7787..9040
                     /gene="proA"
                     /locus_tag="JNZ89_004720"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HAY8938300.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9155..9230
                     /locus_tag="JNZ89_004721"
     tRNA            9155..9230
                     /locus_tag="JNZ89_004721"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9188..9190,aa:Thr,seq:cgt)
     gene            complement(9245..>10233)
                     /locus_tag="JNZ89_004722"
     CDS             complement(9245..>10233)
                     /locus_tag="JNZ89_004722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY8938301.1"
                     /translation="RKFSLQDSRGGSHKKSLDDDKSRIGFWLQHFAGMQLRDITESKI
                     YSAMQKMTNRRHEENWKLRAEACRKKGKPVPEYTPKPASVATKATHLSFIKALLRAAE
                     REWKMLDKAPIIKVPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSNI
                     INLEWQQIDMQRRVAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKESC
                     TKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVLQ
                     EMGGWESIEMVRRYAHLAPNHLTEHARQIDSILNPSVPNLSQSRNKERTNDV"
BASE COUNT         2455 a         2520 c         2665 g         2593 t
ORIGIN      
        1 caccccatta taaggggtac gaataaagta acggggcagt ctattttaca gcggcatatt
       61 gcctcgttct cgcatcatgg tttgcctcaa ggcagtgacg acgcgctacg gtatattgcg
      121 gaacatgacg atgcgctggc gtttgcgtgt attaatcgcc agatgatcgc tttgcgcata
      181 atgcaacaag ttaaggccac gggaagtccg gttctggatg tggcgcataa ctttgttagc
      241 gcgtgtcaaa tcggcgatca acagggctgg ttgcatcgta aaggtgccac gccggatgac
      301 aacggtctgg tgattattcc cggttcacgt ggtgattact cctggattgt acagcctgtt
      361 gcgaacgaaa aaacgctcca ctcgctggcg catggggcag ggcgtaaatg ggggcgcacc
      421 gagtgtaaat ggcgtctggc agcgaaatac acggtgacgc aactctcgcg gactgaactt
      481 ggcagtcgga taatttgtcg cgataaacaa ctcatctttg aagaagcgcc acaagcctat
      541 aaatcggctg aaagcgtggt gcaatgtctg gtgcaggccg gtttaattat tcctgtcgcg
      601 cggctgcgtc cggtgctaac gctcaaaaac agtggaggga aaaaaggatg atcttgctac
      661 aactctcctc agcgcagggg ccggaagaat gttgtctcgc agtgaaaaag gcgctggaca
      721 ggctaattaa agaagctgcc cgacaagacg tcgcggtaac ggtgttggaa acagaaacgg
      781 gccgctactc tgacacgctg cgttcagctc tggtttctct ggatggcgat aacgcatggg
      841 cattaagcga aagctggtgt ggcactattc agtggatttg tccgagtccg tatcggcctc
      901 atcatgggcg caaaaactgg tttctgggca ttgggcgttt taccgctgat gagcaggagc
      961 aatccgatgc gatccggtat gagacgctgc gttcgtcggg gccgggcggt caacatgtca
     1021 ataaaaccga ctcggcggta cgcgccacgc atttggcatc cggtattagc gtgaaggttc
     1081 agtcagagcg tagtcagcat gctaacaagc ggctggcacg attgctgatt gcctggaagc
     1141 tggagcagca gcaacaggaa aatagcgcgg tgctgaaatc gcagcggcga atgttccatc
     1201 accagattga acgtggcaac ccgagacgga catttacagg gatggctttt atcgaaggat
     1261 aatgaaggat gaaactgccg gaaggcgatt aaacgccatc cggcagcaaa tcaaataatt
     1321 acttcgccgg aatttctttc agcagttcag tcagcagtgt ccagtaatga cctacgcttt
     1381 cgatgtgaac ttgctcatcc ggagagtgtg gaccggtgat agttggcccg atagaaacca
     1441 tgtccatttc cggatacggt tttttgaaca gaccacattc caggcccgcg tggataatct
     1501 ggatgttcgg cgtcttgttg aacaggcgct gataggtttc acgtaccaga tgcatcaccg
     1561 gagaattagc gtccggctgc cagccaggat atgcgccttt cgcttcggtt ttcgcgccag
     1621 ccagtttacc cagcgaatcc agcatgctca ccacgtagtc tttaccgctg tcgatcagtg
     1681 aacggatcag gcagtgaatt tctacgttat tgtcagtcat ggtcaccaca ccgacgttca
     1741 gggaggtttc aaccacacct ttggctacat cggagttgcg gatcacaccg ttcggggtgg
     1801 cgttcagcag acgaataaag gtatcgcgag atttcgcaat cagggcagct ttatcgttcg
     1861 ctacagagtc cagcaacaag gccagatttt tctctttctc tgccagctcg tttttcagga
     1921 tctcctgata ggtattcacc agagatttca gtgcgtcgac tttatcagct gcgacagcaa
     1981 tggtcgcaaa ggcttcacgc gggatggcgt tacgcagtgt gccgccgttg aaatcgataa
     2041 ggcgcaggtc cagttcttct gcatgacccg ccaggaagcg caccagcagt ttgttggcat
     2101 tacccaggcc aacgtggatt tcaccgccgg agtgaccgcc tttcagacct tttaaggtta
     2161 acttgaaggt ttcaaaacca gctggaaccg cttcacgatc taaatgcagg ttggaggtga
     2221 agtcgatacc ccccgcacaa cccatgtaga tttcaccttc ttcttcggag tcggtgttaa
     2281 tcagaatatc agcctgcaac cagttgctct gtaagccaaa agcaccgtcc ataccggctt
     2341 cttcggtcat ggtcagcagc acttccagcg gaccgtgaac cacgttttcg tcagccagaa
     2401 ccgccagtgc agaggccata ccaatgccgt tatccgcacc cagcgtggtg ccgcgcgctt
     2461 taacccattc gccatcaata taaggctgga taggatcttt cgtgaagtca tgcacggtgt
     2521 cgttattttt ctgcggcacc atatcgaggt gggcctgtaa gacgaccggt ttacgatttt
     2581 ccatacctgc ggtagcaggt ttacgaatca ggatattacc tacctgatcg cgttcgacat
     2641 ggaaaccttt ctcttttgcc caaccaacaa tgtattcagc gagttgctct tcatgatagg
     2701 acgggtgcgg aatagaacag attttggcaa aaatatccca cagcggctgt ggagataatt
     2761 gagacagttc agacacgtta agtctccttg tcgatcaccc gcaaaacagt attgcaggtc
     2821 acagggttag cagaaaatgt tgtcaacaca agacaggctt gcgagatatg tttgagaata
     2881 ccactttatc ccgcgtcagg gagaggcagt gcgtaaaaag acgcggactc atgtgaaata
     2941 ctggttttta gtgcgccaga tctctataat ctcgcgcaac ctattttccc ctcgaacact
     3001 ttttaagccg tagataaaca ggctgggaca cttcacatga gcgaaaaata catcgtcacc
     3061 tgggacatgt tgcagatcca tgcacgtaaa ctcgcaagcc gactgatgcc ttctgaacaa
     3121 tggaaaggca ttattgccgt aagccgtggc ggtctggtac cgggtgcgtt actggcgcgt
     3181 gaactgggta ttcgtcatgt cgataccgtt tgtatttcca gctacgatca cgacaaccag
     3241 cgagagctta aagtgctgaa acgcgcagaa ggcgatggcg aaggcttcat agttattgat
     3301 gacctggtgg ataccggtgg tactgctgtt gcgattcgtg aaatgtatcc aaaagcgcac
     3361 tttgtcacca tcttcgcaaa accggctggt cgtccgctgg ttgatgacta tgttgttgat
     3421 attccgcaag atacctggat cgaacagccg tgggatatgg gcgtcgtatt cgtcccgcca
     3481 atctccggtc gctaatcttt tcaacgcctg gcactgccgg gcgttgttct ttttaacttc
     3541 aggcaggtta caatagtttc cagtaagtat tctggaggct gcatccatga cacaggcaaa
     3601 cctgagcgaa accctgttca aaccccgctt taaacatcct gaaacctcga cgctagtccg
     3661 ccgctttaat cacggcgcac aaccgcctgt gcagtcggct cttgatggta aaaccatccc
     3721 tcactggtat cgcatgatta accgtctgat gtggatctgg cgcggtattg acccacgtga
     3781 aatcctcgac gtccaggcac gtattgtgat gagcgatgct gaacgtaccg acgatgattt
     3841 atacgatact gtgattggct accgtggtgg caactggatt tatgagtggg ccacccaggc
     3901 gatggtgtgg caacaaaaag cctgtgcgga agaagatccg caactcagtg gtcgacactg
     3961 gctgcatgcg gctacgttgt acaacattgc cgcctatcct catctgaaag gagatgacct
     4021 ggccgagcaa gcgcaggctt tatcaaaccg cgcctatgaa gaggccgccc agcgtctgcc
     4081 gggcacgatg cggcagatgg agtttaccgt acccggcggt gcgcccatca ccggcttttt
     4141 gcatatgccg aaaggcgatg gcccgttccc gacagtatta atgtgtggtg gtctggatgc
     4201 gatgcagacg gactattaca gcctgtatga acgttatttt gcgccgcgcg gcattgtgat
     4261 gctgactatt gatatgccgt cggtgggctt ttcttcaaaa tggaagctca cccaggactc
     4321 cagcctgttg catcagcacg tcttaaaggc gctgcctaac gtaccgtggg tggatcacac
     4381 tcgcgtcgcg gcctttggtt tccgtttcgg cgctaacgtt gccgtgcgtc tggcatatct
     4441 tgaatcgccg cgtctgaaag cggttgcctg tcttggtccg gtagttcata ccctgttgag
     4501 tgattttaag tgccagcaac aggtgccgga aatgtatctt gacgttctgg cgagtcgttt
     4561 ggggatgcat gatgcttccg acgaagcgtt acgcgtggag ctgaatcgct attcattaaa
     4621 agtgcaagga ttgctgggac gtcgctgccc aacgccaatg ttatcaggct actggaagaa
     4681 cgatccgttc agcccggaag aggactcacg cttaatcacc tcatcatctg ctgacggtaa
     4741 attattagag atcccattta acccggtgta tcggaatttt gacaaaggtc ttcaggaaat
     4801 caccggctgg atcgaaaaac gcttgtgtta aaaatttgct aaattttgcc aatttggtaa
     4861 aacagttgca tcacaacagg agatagcaat gacgttaccg agtggacacc cgaagagcag
     4921 attgatcaaa aaatttaccg cactaggccc gtatattcgt gaaggtaagt gcgaagataa
     4981 tcgattcttt ttcgattgtc tggctgtatg cgtcaacgtg aaaccggcac cggaagtgcg
     5041 tgaattctgg ggctggtgga tggagctgga agcgcaggaa tcccgtttta cctacagcta
     5101 ccagtttggt ctgttcgata aagcaggcga ctggaagagt gttccggtaa aagatactga
     5161 agtggttgaa cgactggagc acaccctgcg tgagtttcac gagaagctgc gtgaactgct
     5221 gacgacgctg aatctgaagc tggaaccggc ggatgatttt cgtgacgagc cggtgaagtt
     5281 aacggcgtga gtgaaatgtg ccggatgcat cacatccggc aatatctatt aaaactgata
     5341 cgtcatccca atcgcgacaa tatcatcatt attaatattc aatttgttat cgctatccag
     5401 ttggttgatt ttataatcaa caaatgctga catatttttg ttgaaataat acgtagcacc
     5461 gacgtcgata taattaacca gatcttcacc accgatgccc tcaatatctt tccctttcga
     5521 taagacataa cccagcgatg gacgcagacc aaagtcaaac tggtattgag cgaccgcttc
     5581 aaagttctgt gtcttattgg caaagccgcc agttattggc gtcattttgc gagtttcaga
     5641 atagaaagtt gccagataaa tattattggc atcgtatttc agacctgttg cccatgcttc
     5701 tgcacgcttg cctgtgccac ggctttgcag gttctgctcg ttggtgcgat ctgagttggt
     5761 ataggcccca ctaatggcga aatcgctgcc gccaaagtca tatgtcaatg acgtgccgaa
     5821 gccatcgccg ttttgctttt taacgtcgcg gttttcgttt ttcccttgat attgcagggt
     5881 taagttcagg ccatcgataa cgccgaagaa gtcggtgttc cgatacgtcg ccagaccgct
     5941 ggcgcgtttg gtcataaagt tgtcggtctg cgccgaggag tcgccaccaa attccggaaa
     6001 catatcggtc caggcttcca cgtcatacaa cgcgcccagg ttacgaccat aatcgaaaga
     6061 acccaaatct ttatatttca acccggcaaa agcgagacgc gttttttgct gtgcagtatc
     6121 actctctgct ttattaccgg caaactctgc ttcccaacga ccataaccag tcagttgatc
     6181 gttaatttgt gtttcgcctt taaaaccaaa acggatataa ctctggtcgc catctttact
     6241 gtcgttatca ctcatataat gcatggcttt aactttgcca tagacatcca gtttattacc
     6301 gtctttgtta tatatttctg cggcctgtac ggatgcagat gccacaatgc ccatcaccac
     6361 taatgccaga gtgctctttt tcattttcat tcctgatttt aattaacgcg cgaatattca
     6421 gcgggagagc cccgttgaaa acaggaaagt ttttaacctg agattgttaa agatatatta
     6481 cagattaata atattcttaa aatgtggtaa tttattaaat ctgtaataaa agcgtaaaca
     6541 actgccgcta ggcttgctga tcccgcgcaa caaaacgcca tgctttgctc gcagatggtt
     6601 ggcaaccgac gacagtcctg ctaaaacgtt cgtttgatat catttttcct aaaattgaat
     6661 ggcagagaat catgagtgac agccagacgc tggtggtaaa actcggcacc agtgtgctaa
     6721 caggcggatc gcgccgtctg aaccgtgccc atatcgttga acttgttcgc cagtgcgcgc
     6781 agttacatgc cgccgggcat cggattgtta ttgtgacgtc gggcgcgatc gccgccggac
     6841 gtgagcactt gggttacccg gaactgccag cgactatcgc ctcgaaacaa ctgctggcag
     6901 cggtagggca gagtcgactg attcaactgt gggaacagct gttttcgatt tatggcattc
     6961 acgtcgggca aatgctgctg acccgtgctg atatggaaga ccgtgaacgc ttcctgaacg
     7021 cccgcgacac cctgcgtgcg ttgctcgata acaatatcgt tccggtaatc aatgagaacg
     7081 atgctgtcgc tacggcagag attaaagtcg gcgataacga taacctttct gcgctggcgg
     7141 cgattctggc gggtgccgat aaactgttgc tgctgaccga tcaaaaaggt ttgtataccg
     7201 ctgacccgcg cagcaatccg caggcagaac tgattaaaga tgtttacggc attgatgacg
     7261 cactgcgcgc gattgccggt gacagcgttt caggcctcgg aactggcggc atgagtacca
     7321 aattgcaggc cgctgacgtg gcttgccgtg cgggtatcga caccattatt gccgcgggca
     7381 gcaagccggg cgttattggt gatgtgatgg aaggcatttc cgtcggtacg ctgttccatg
     7441 cccaggcgac tccgcttgaa aaccgtaaac gctggatttt cggtgcgccg ccggcgggtg
     7501 aaatcacggt agatgaaggg gcaactgccg ccattctgga acgcggcagc tccctgttgc
     7561 cgaaaggcat taaaagcgtg actggcaatt tctcgcgtgg tgaagtcatc cgcatttgca
     7621 acctcgaagg tcgcgatatc gcccacggtg tcagtcgtta caacagcgat gcattacgcc
     7681 gtattgccgg acaccactcg caagaaattg atgcaatact gggatatgaa tacggcccgg
     7741 ttgccgttca ccgtgatgac atgattaccc gttaaggagc tggccgatgc tggaacaaat
     7801 gggcattgcc gcgaagcaag cctcgtataa attagcgcaa ctctccagcc gcgaaaaaaa
     7861 tcgcgtgctg gaaaaaatcg ccgatgaact ggaagcacaa agcgaaatca ttctcaacgc
     7921 taacgcccag gatgttgctg acgcgcgagc caatggcctt agcgaagcga tgcttgaccg
     7981 tctggcactg acgcccgcac ggctgaaagg cattgccgac gatgtacgtc aggtgtgcaa
     8041 cctcgccgat ccggtggggc aggtaatcga tggcggcgta ctggacagcg gcctgcgtct
     8101 tgagcgtcgt cgcgtaccgc tgggagttat tggcgtgatt tatgaagcgc gcccgaacgt
     8161 gacggttgat gtcgcttcgc tgtgcctgaa aaccggtaat gcggtgatcc tgcgcggtgg
     8221 caaagaaacg tgtcgcacta acgctgcaac agtggcggtg attcaggacg ccctgaaatc
     8281 ctgcggctta ccggcgggtg ccgtgcaggc gattgataat cctgaccgtg cgctggtcag
     8341 tgaaatgctg cgtatggata aatacatcga catgctgatc ccgcgtggtg gcgctggttt
     8401 gcataaactg tgccgtgaac agtcgacaat cccggtgatc acaggtggta taggcgtatg
     8461 ccatatttac gttgatgaaa gtgtagagat cgctgaagca ttaaaagtga tcgtcaacgc
     8521 gaaaactcag cgtccgagca catgtaatac ggttgaaacg ttgctggtga ataaaaacat
     8581 cgccgatagc ttcctgcccg cattaagcaa acaaatggcg gaaagcggcg tgacattaca
     8641 cgcagatgca gctgcactgg cgcagttgca ggcaggccct gcgaaggtgg ttgctgttaa
     8701 agccgaagag tatgacgatg agtttctgtc attagatttg aacgtcaaaa tcgtcagcga
     8761 tcttgacgat gccatcgccc atattcgtga acacggcaca caacactccg atgcgatcct
     8821 gacctgcgat atgcgcaacg cccagcgttt tgttaacgaa gtggattcgt ccgctgttta
     8881 cgttaacgcc tctacgcgtt ttaccgacgg cggccagttt ggtctgggtg cggaagtggc
     8941 ggtaagcaca caaaaactcc acgcgcgtgg cccaatgggg ctggaagcac tgaccactta
     9001 caagtggatc ggcattggtg attacaccat tcgtgcgtaa ataaaaccgg gtgatgcaaa
     9061 agtagccatt tgattcacaa ggccattgac gcatcgcccg gttagtttta accttgtcca
     9121 ccgtgattca cgttcgtgaa catgtccttt cagggccgat atagctcagt tggtagagca
     9181 gcgcattcgt aatgcgaagg tcgtaggttc gactcctatt atcggcacca tttaaatcaa
     9241 taagttacac atcattagta cgttccttat ttcttgactg ggacaaattt gggaccgatg
     9301 ggttcagaat cgagtctatt tgccgtgcgt gttcggtaag gtgattaggt gcgaggtgag
     9361 catatcgacg aaccatttcg atagactccc agcctcccat ttcctgtaac actgataacg
     9421 ggactccggc ttgaaccagc caacttgccc aggtgtgtct caagtcgtga aatctgaaat
     9481 catcaatacc tgctcgtctc agcgccgctt tccaggctgt gtttgcgtca taccgcatct
     9541 tcctgactgt tggcgctttc gttccgtctg gtttggtaca gctttcctta tacacaaata
     9601 cccaacggtg atgattcccg atttgttttt tcaatacgcg acatgcagta tcattcagcg
     9661 caacgccaat tgcgcggttt gatttactct cttccgggtt tatccatgcc acccggcgct
     9721 gcatgtctat ttgttgccat tcaaggttga tgatgttcga gcgtcttaag cctgttgcaa
     9781 gtgcaaattc aacaacagac tttaatggct ccggacattc atcaatcagc ctttgtgctt
     9841 catgaggctc cagccagcgg atccgtttat tctttggttg aggcacttta ataattggtg
     9901 ccttatccag cattttccat tcacgctctg cggctcttag cagggccttt ataaatgaaa
     9961 gatgcgtagc cttcgttgca acggacgctg gttttggcgt gtattctgga acaggtttcc
    10021 ctttttttct gcatgcttct gccctgagtt tccagttttc ctcatgacgc cggttcgtca
    10081 ttttctgcat tgctgaataa atttttgatt cagtaatgtc tcttagttgc attcctgcga
    10141 aatgttgaag ccagaatccg atccggcttt tgtcatcgtc cagtgatttt ttatgtgaac
    10201 cgccccggga atcctggaga ctaaacttcc tga
//
LOCUS       DADMIB010000466         5664 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.222, whole genome shotgun sequence.
ACCESSION   DADMIB010000466 DADMIB010000000
VERSION     DADMIB010000466.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5664
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.222"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            68..283
                     /locus_tag="JNZ89_004723"
     CDS             68..283
                     /locus_tag="JNZ89_004723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001384468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HAY8938302.1"
                     /translation="MSIERFQSLATEGKMLSLSWWENEYAVLQWKNHVLHAKAQQEGR
                     ESIFDFYKISIAHITREYSFKKDKDNV"
     gene            276..662
                     /locus_tag="JNZ89_004724"
     CDS             276..662
                     /locus_tag="JNZ89_004724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000460649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid-binding protein"
                     /protein_id="HAY8938303.1"
                     /translation="MFDVHVVLDNQIGQLALLGKTLGNKGIGLEGGGIFTVGDECHAH
                     FLVEQGKEAKIALEQAGLLVLAIRTPLIRKLKQEKPGELGEIARVLAENNINILVQYS
                     DHANQLILITDNDSMAASVTLPWAIK"
     gene            670..1356
                     /locus_tag="JNZ89_004725"
     CDS             670..1356
                     /locus_tag="JNZ89_004725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001284954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HAY8938304.1"
                     /translation="MANLIRKEVTFESSIAAIGAAMSDISRVKILSALMDGRAWTATE
                     LSSVANISASTASSHLSKLLDCQLITVVAQGKHRYFRLAGKDIAELMESMMGISLNHG
                     VHAKVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITLSGIQYFHEMG
                     IDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKGWLTRHLGYREVTITEKG
                     YAAFKTHFHI"
     gene            complement(1334..1957)
                     /gene="tetR(B)"
                     /locus_tag="JNZ89_004726"
     CDS             complement(1334..1957)
                     /gene="tetR(B)"
                     /locus_tag="JNZ89_004726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000088607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(B)"
                     /protein_id="HAY8938305.1"
                     /translation="MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWH
                     VKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLG
                     TRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERET
                     PTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS"
     gene            2039..3244
                     /gene="tet(B)"
                     /locus_tag="JNZ89_004727"
     CDS             2039..3244
                     /gene="tet(B)"
                     /locus_tag="JNZ89_004727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001089064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(B)"
                     /protein_id="HAY8938306.1"
                     /translation="MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFG
                     VLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRL
                     LSGITGATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSP
                     FFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYF
                     SAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKT
                     AVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQGVMSIQTKSHQQGAL
                     QGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQA
                     QGSKQETSA"
     gene            complement(3357..3950)
                     /gene="tetC"
                     /locus_tag="JNZ89_004728"
     CDS             complement(3357..3950)
                     /gene="tetC"
                     /locus_tag="JNZ89_004728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000428546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracyline resistance-associated
                     transcriptional repressor TetC"
                     /protein_id="HAY8938307.1"
                     /translation="MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKAL
                     VTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIID
                     NNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLN
                     GWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK"
     gene            4038..4448
                     /locus_tag="JNZ89_004729"
                     /pseudo
     CDS             4038..4448
                     /locus_tag="JNZ89_004729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014656611.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(4464..>5664)
                     /locus_tag="JNZ89_004730"
     CDS             complement(4464..>5664)
                     /locus_tag="JNZ89_004730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001339197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS4-like element ISVsa5 family transposase"
                     /protein_id="HAY8938308.1"
                     /translation="EHKTLSVSWSHYPELHLKRLNSLTLACHALLDCKTLTLTELGRN
                     LPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQK
                     RLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAG
                     FKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTK
                     SNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIRTPK
                     QLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGV
                     HAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTH
                     GYALGKL"
BASE COUNT         1569 a         1045 c         1229 g         1821 t
ORIGIN      
        1 tgaacataaa acactatcaa taagttggag tcattaccga ccactattaa gtcatgtagc
       61 tggttttatt tcaattgaac gttttcaaag tctagctaca gaaggaaaaa tgttatcgct
      121 atcttggtgg gaaaacgaat acgcagttct gcaatggaaa aatcatgttt tacatgcgaa
      181 agctcaacaa gaagggcgag agtcaatatt tgatttttac aaaattagta ttgctcatat
      241 tactcgcgaa tattcattta aaaaggacaa ggataatgtt tgatgttcac gttgttttag
      301 ataatcaaat aggacaatta gcattactag gaaaaacatt aggtaataaa ggtattggat
      361 tggaaggggg agggatattt acggttggtg atgaatgcca tgctcatttt cttgttgaac
      421 aaggaaagga agctaaaata gcgctagagc aagctggact gttagtactt gcgatccgga
      481 caccattaat tcgtaagtta aaacaggaaa aaccggggga acttggcgaa atagcacgag
      541 tattggcgga gaataacatt aatattttag tgcaatacag tgaccatgct aaccaactga
      601 tattaataac ggacaatgat agtatggctg catctgttac gctcccttgg gcaataaagt
      661 gaacttgcga tggctaattt aatacgaaaa gaggttacct ttgagtcctc aatagccgcg
      721 ataggggcgg ctatgtctga catttcacga gttaaaatac tcagtgcttt gatggatggg
      781 cgagcttgga cggccactga gctaagttct gtggcgaata tatcagcttc aacggcgagc
      841 agtcatttat ctaaattatt agattgccag ctaatcacag tagtagctca aggcaagcat
      901 cgttattttc ggctagcagg aaaagatatt gctgaattga tggaaagtat gatggggatc
      961 tccttaaacc atggcgtaca tgccaaagtt tccacgccag tgcatttacg aaaagcacgt
     1021 acttgctatg atcatttagc tggcgaagtt gccgttaaga tctatgattc cctttgtcaa
     1081 cagcaatgga tcactgaaaa tggttcaatg atcacattaa gtggtattca atattttcat
     1141 gaaatgggaa ttgacgttcc ttccaaacat tcacgtaaaa tctgttgtgc gtgtttagat
     1201 tggagtgaac gccgtttcca tttaggtggg tacgttggag ccgcattatt ttcgctttat
     1261 gaatctaaag ggtggttaac tcgacatctt ggttaccgtg aagttaccat cacggaaaaa
     1321 ggttatgctg cttttaagac ccactttcac atttaagttg tttttctaat ccgcatatga
     1381 tcaattcaag gccgaataag aaggctggct ctgcaccttg gtgatcaaat aattcgatag
     1441 cttgtcgtaa taatggcggc atactatcag tagtaggtgt ttccctttct tctttagcga
     1501 cttgatgctc ttgatcttcc aatacgcaac ctaaagtaaa atgccccaca gcgctgagtg
     1561 catataatgc attctctagt gaaaaacctt gttggcataa aaaggctaat tgattttcga
     1621 gagtttcata ctgtttttct gtaggccgtg tacctaaatg tacttttgct ccatcgcgat
     1681 gacttagtaa agcacatcta aaacttttag cgttattacg taaaaaatct tgccagcttt
     1741 ccccttctaa agggcaaaag tgagtatggt gcctatctaa catctcaatg gctaaggcgt
     1801 cgagcaaagc ccgcttattt tttacatgcc aatacaatgt aggctgctct acacctagct
     1861 tctgggcgag tttacgggtt gttaaacctt cgattccgac ctcattaagc agctctaatg
     1921 cgctgttaat cactttactt ttatctaatc tagacatcat taattcctaa tttttgttga
     1981 cactctatca ttgatagagt tattttacca ctccctatca gtgatagaga aaagtgaaat
     2041 gaatagttcg acaaagatcg cattggtaat tacgttactc gatgccatgg ggattggcct
     2101 tatcatgcca gtcttgccaa cgttattacg tgaatttatt gcttcggaag atatcgctaa
     2161 ccactttggc gtattgcttg cactttatgc gttaatgcag gttatctttg ctccttggct
     2221 tggaaaaatg tctgaccgat ttggtcggcg cccagtgctg ttgttgtcat taataggcgc
     2281 atcgctggat tacttattgc tggctttttc aagtgcgctt tggatgctgt atttaggccg
     2341 tttgctttca gggatcacag gagctactgg ggctgtcgcg gcatcggtca ttgccgatac
     2401 cacctcagct tctcaacgcg tgaagtggtt cggttggtta ggggcaagtt ttgggcttgg
     2461 tttaatagcg gggcctatta ttggtggttt tgcaggagag atttcaccgc atagtccctt
     2521 ttttatcgct gcgttgctaa atattgtcgc tttccttgtg gttatgtttt ggttccgtga
     2581 aaccaaaaat acacgtgata atacagatac cgaagtaggg gttgagacgc aatcgaattc
     2641 ggtatacatc actttattta aaacgatgcc cattttgttg attatttatt tttcagcgca
     2701 attgataggc caaattcccg caacggtgtg ggtgctattt accgaaaatc gttttggatg
     2761 gaatagcatg atggttggct tttcattagc gggtcttggt cttttacact cagtattcca
     2821 agcctttgtg gcaggaagaa tagccactaa atggggcgaa aaaacggcag tactgctcgg
     2881 atttattgca gatagtagtg catttgcctt tttagcgttt atatctgaag gttggttagt
     2941 tttccctgtt ttaattttat tggctggtgg tgggatcgct ttacctgcat tacagggagt
     3001 gatgtctatc caaacaaaga gtcatcagca aggtgcttta cagggattat tggtgagcct
     3061 taccaatgca accggtgtta ttggcccatt actgtttgct gttatttata atcattcact
     3121 accaatttgg gatggctgga tttggattat tggtttagcg ttttactgta ttattatcct
     3181 gctatcgatg accttcatgt taacccctca agctcagggg agtaaacagg agacaagtgc
     3241 ttagttattt cgtcaccaaa tgatgttatt ccgcgaaata taatgaccct cttgataacc
     3301 caagagggca ttttttacga taaagaagat ttagcttcaa ataaaaccta tctattttat
     3361 ttatctttca agctcaataa aaagccgcgg taaatagcaa taaattggcc ttttttatcg
     3421 gcaagctctt ttaggttttt cgcatgtatt gcgatatgca taaaccagcc attgagtaag
     3481 tttttaagca catcatcatc ataagcttta agttggttct cttggatcaa tttgctgaca
     3541 atggcgttta ccttaccagt aatgtattca aggctaattt tttcaagttc attccaacca
     3601 atgataggca tcacttcttg gatagggata aggtttttat tattatcaat aatataatca
     3661 agataatgtt caaatatact ttctaaggca gaccaaccat ttgttaaatc agtttttgtt
     3721 gtgatgtagg catcaatcat aattaattgc tgcttataac aggcactgag taattgtttt
     3781 ttatttttaa agtgatgata aaaggcacct ttggtcacca acgcttttcc cgagatctca
     3841 tctattgaaa cagcttgata gcctttttca acaaacaata ttcgtgctga gttaaccagt
     3901 gattgatagg tactcttaaa attttcttgt tgatgatttt tattttccat gatagattta
     3961 aaataacata ccgtcagtat gtttatggta tcatgatgat gtggtcgtga caatcttaag
     4021 aacatttagg ttattttatg tatattgaac agcattctcg ctatcaaaat aaagctaata
     4081 acatccaatt aagatatgat gataagcagt ttcatacaac ggttatcaaa gatgttctat
     4141 tatggattga acataattta gatcagtctt tactgcttga tgatgtggcg aataaagcgg
     4201 gttataccaa gtggtatttt cagcggctgt tcaaaaaagt aacaggggtc acactggcta
     4261 gctatattcg tgctcgtcgt ttgacgaaag cggctgttga gttgaagttg acgaaaaaaa
     4321 ctatccttga gatcgcatta caatatcaat ttgattccca acaatctttt acacgtcgat
     4381 ttaagtacat ttttaaggtt acaccaagtt attatcggcg taataaatta tgggaattgg
     4441 aggcaatgca ctgagagatc ccctcataat ttccccaaag cgtaaccatg tgtgaataaa
     4501 ttttgagcta gtagggttgc agccacgagt aagtcttccc ttgttattgt gtagccagaa
     4561 tgccgcaaaa cttccatgcc taagcgaact gttgagagta cgtttcgatt tctgactgtg
     4621 ttagcctgga agtgcttgtc ccaaccttgt ttctgagcat gaacgcccgc aagccaacat
     4681 gttagttgaa gcatcagggc gattagcagc atgatatcaa aacgctctga gctgctcgtt
     4741 cggctatggc gtaggcctag tccgtaggca ggacttttca agtctcggaa ggtttcttca
     4801 atctgcattc gcttcgaata gatattaaca agttgtttgg gtgttcgaat ttcaacaggt
     4861 aagttagttg ctagaaccca tggctccttt gccgacgctg agtagatttt aggtgacggg
     4921 tggtgacaat gagtccgtgt cgagcgctga ttttttcggc ctttagagcg agatttatac
     4981 aatagaattt ggcatgagat tggattgctt ttagtcagcc tcttatagcc taaagtcttt
     5041 gagtgactag atgacatatc atgtaagttg ctgataggtt tccagttttc cgctcctagg
     5101 tctgcatatt gtacttttcc tcttactcga cttaaccagt accaacccag cttctcaacg
     5161 gatttatacc atggcacttt aaagccagca tcactgacaa tgagcggtgt ggtgttactc
     5221 ggtagaatgc tcgcaaggtc ggctagaaat tggtcatgag ctttctttga acattgctct
     5281 gaaagcggga acgctttctc ataaagagta acagaacgac cgtgtagtgc gactgaagct
     5341 cgcaatacca taagtcgttt ttgctcacga atatcagacc agtcaacaag tacaatgggc
     5401 atcgtattgc ccgaacagat aaagctagca tgccaacggt atacagcgag tcgctctttg
     5461 tggaggtgac gattacctaa caatcggtcg attcgtttga tgttatgttt tgttctcgct
     5521 ttggttggca ggttacggcc aagttcggta agagtgagag ttttacagtc aagtaatgcg
     5581 tggcaagcca acgttaagct gttgagtcgt tttaagtgta attcggggta atgactccaa
     5641 cttactgata gtgttttatg ttca
//
LOCUS       DADMIB010000467         4509 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.246, whole genome shotgun sequence.
ACCESSION   DADMIB010000467 DADMIB010000000
VERSION     DADMIB010000467.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4509
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.246"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            60..299
                     /locus_tag="JNZ89_004731"
     CDS             60..299
                     /locus_tag="JNZ89_004731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011264039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY8938309.1"
                     /translation="MAYVQESIAPEMMGKVFSLLMTAMTLSMPIGLLVAGPVVEVIGV
                     NTWFFWSGVALIVNAVLCRILTRRYDKVTMKPQVD"
     gene            445..1308
                     /locus_tag="JNZ89_004732"
     CDS             445..1308
                     /locus_tag="JNZ89_004732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000612791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY8938310.1"
                     /translation="MIPNSENKRVWFITGASKGLGYAFTCAALKAGDKVVAVARTIDN
                     LAKLEETYQESLLPLNLDVTDREAVFSTVETAVKHFGRLDIVVNNAGIMTMGMIEELN
                     ESDARKLMDTNFFGALWVCQAVMPYLRSQRSGHIIQITSIGAIISGPMSGIYSASKFA
                     LEGMSEALAKEAEHFGVKLTMVEPGGYWTDLYTSMSYSNPLDSYGTLRDELAKQYSED
                     SVDSDPSLAAEALMKLVASNNPPLRLILGSMVYDLAMDTLKARMATWEEWEAVSRASE
                     KAIPAPERYGV"
     gene            1346..1591
                     /locus_tag="JNZ89_004733"
     CDS             1346..1591
                     /locus_tag="JNZ89_004733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001354008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrpB family protein"
                     /protein_id="HAY8938311.1"
                     /translation="MKIEIMEYNPDWTKNFEEEKIKLLHFFGSHAVAIEHIGSTAIPN
                     QRAKPVIDIFIGVSPFAELPFISAFLMQRSITTLRQI"
     gene            2060..2851
                     /gene="sul3"
                     /locus_tag="JNZ89_004734"
     CDS             2060..2851
                     /gene="sul3"
                     /locus_tag="JNZ89_004734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul3"
                     /protein_id="HAY8938312.1"
                     /translation="MSKIFGIVNITTDSFSDGGLYLDTDKAIEHALHLVEDGADVIDL
                     GAASSNPDTTEVGVVEEIKRLKPVIKALKEKGISISVDTFKPEVQSFCIEQKVDFIND
                     IQGFPYPEIYSGLAKSDCKLVLMHSVQRIGAATKVETNPEEVFTSMMEFFKERIAALV
                     EAGVKRERIILDPGMGFFLGSNPETSILVLKRFPEIQEAFNLQVMIAVSRKSFLGKIT
                     GTDVKSRLAPTLAAEMYAYKKGADYLRTHDVKSLSDALKISKALG"
     gene            complement(2854..3129)
                     /locus_tag="JNZ89_004735"
     CDS             complement(2854..3129)
                     /locus_tag="JNZ89_004735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY8938313.1"
                     /translation="MNIGLFGFTNKHYYLATKTQEKYTKPFGSDGSLSPLDYSVGIGT
                     GLELGHFQFMFGYDYPLSNSSKDPDLSQVRQHNFRASIAYSFRKLKK"
     gene            3131..3766
                     /locus_tag="JNZ89_004736"
                     /pseudo
     CDS             3131..3766
                     /locus_tag="JNZ89_004736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014455198.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
     gene            complement(4031..4363)
                     /gene="qac"
                     /locus_tag="JNZ89_004737"
     CDS             complement(4031..4363)
                     /gene="qac"
                     /locus_tag="JNZ89_004737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015059047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacL"
                     /protein_id="HAY8938314.1"
                     /translation="MKNWLFLAIAIFGEVVATSALKSSHGFTKLVPSVVVVAGYGLAF
                     YFLSLALKSIPVGIAYAVWAGLGIVLVAAIAWIFHGQKLDLWAFVGMGLIVSGVAVLN
                     LLSKVSAH"
BASE COUNT         1296 a          881 c         1090 g         1242 t
ORIGIN      
        1 gacaaaaggc tgcctcatcg ctaactttgc aacagtgccc atttatgaat gttcctgtta
       61 tggcttatgt tcaagaaagc attgcccctg aaatgatggg caaggtgttt tcccttttga
      121 tgaccgccat gactctttct atgccgatag gcttacttgt tgcaggtccg gttgttgagg
      181 ttataggtgt taatacatgg tttttctggt ctggtgttgc gttgatagta aacgctgttc
      241 tctgccgcat tctgacacga cgctatgaca aagtaacaat gaaaccgcaa gtggactgaa
      301 aaaaggaccg ggttgatgat aatttgtagt ggtgagcttc tgggagtaca aaacaaagtg
      361 ctcaaaattg tcgggctcat ggcgtttaac ggtattaatt tcgcttataa taatctttct
      421 ataatagcct aaaggagaat atctatgata cctaatagcg aaaataaaag agtatggttt
      481 attaccggag caagcaaggg gcttggctat gcttttacat gcgccgcctt gaaagccggg
      541 gataaagttg ttgcagttgc aaggactatc gataatttgg cgaagctaga agaaacatat
      601 caagagagct tactgccatt aaacctcgat gttacagata gggaggctgt tttttctacg
      661 gttgaaacag cagttaaaca tttcggtagg cttgatattg ttgttaataa tgcgggtatc
      721 atgactatgg gtatgattga agaactaaac gaatccgatg ctcggaaact aatggacaca
      781 aacttttttg gagctctttg ggtttgtcag gcagtgatgc cctatttgag gtcgcagcgt
      841 tctggacata tcatacagat tacaagcatt ggcgctatta tctcgggtcc gatgtctggt
      901 atttacagtg caagtaaatt tgcgctggaa ggaatgagtg aagccttagc aaaagaagcg
      961 gaacatttcg gagtgaaact cactatggtg gaaccaggag gatattggac agatttatac
     1021 acttcgatga gttacagcaa tccattagat tcatacggta cactgcgcga tgagctggcg
     1081 aaacagtatt ccgaagattc ggtcgatagt gatccttcct tggcagcgga agcccttatg
     1141 aaattagtag ccagcaataa tccgcctttg aggcttatcc ttggcagcat ggtatacgat
     1201 ttggcgatgg ataccttaaa agcacggatg gctacctggg aagaatggga agctgttagc
     1261 cgtgcatcag aaaaggctat tcctgcaccg gagagatatg gagtataata ccaaacatgg
     1321 tttttgaggc aaggacgaaa ctatcatgaa aattgaaatt atggaatata acccggattg
     1381 gacaaagaat tttgaagaag agaaaataaa attgctccat tttttcggtt ctcatgccgt
     1441 agccattgaa catatcggaa gcacggcgat acccaatcaa cgggcgaaac cggttataga
     1501 tatatttatt ggcgtttcgc cttttgctga actacctttt atcagcgcat ttttaatgca
     1561 aaggagtatc accacactcc gacagatatg acaggcagat atttgtttgc aaaatataca
     1621 aatgaagttt ggacccataa tcttcttgct ttggtgtagg tataataccc aaaaacgaag
     1681 tttatgcgga acaggataac acctcgaaat cggagtttat atggcttcgt gggggagtta
     1741 tgtgtttgag ctttgtcgca ttaacgcgaa tcaggggttg acggcagaaa tagactggaa
     1801 ttacacttct tggagtcggc gttgccggaa aattctgatt ggattagttg ttcggggtgc
     1861 gaaaacagtc gtagttcggg gaaaaaaccg aattttgacc caaaaccgcg aaaaactcga
     1921 aatgacagtt cctatcagtt ttcataatga attaaaacaa aaaaattagg ctgcaaagat
     1981 agggaaaatg tgtcaatttg cgtaagtgat aattagtcaa ttaagataaa tgctactttt
     2041 gtaatcaaag caaaatgata tgagcaagat ttttggaatc gtaaatataa ccaccgatag
     2101 tttttccgat ggaggacttt atttagatac agataaggca attgagcatg ctctgcattt
     2161 ggttgaagat ggagcagatg tgattgattt gggagccgct tccagtaatc ctgatacaac
     2221 tgaagtgggc gttgtggaag aaatcaaaag actcaaacct gtcattaagg ctttaaaaga
     2281 aaaaggcatt tctatttctg ttgatacatt taaacctgag gttcagagtt tttgcataga
     2341 acaaaaggtt gattttatta atgatattca aggttttcct tatcctgaga tttattcagg
     2401 cttggcaaag tcagattgca aacttgtgtt gatgcactcc gttcagcgaa ttggtgcagc
     2461 tactaaagtt gaaacgaatc cggaagaggt ttttacttcc atgatggaat tttttaaaga
     2521 aagaattgct gctttagttg aggctggtgt aaagcgtgaa cgaattattc ttgatccggg
     2581 tatgggcttc tttttaggct ctaatccaga aacatctatt cttgttttga agcgtttccc
     2641 tgaaattcaa gaagctttta atttgcaagt aatgattgca gtgtcacgga aatcattctt
     2701 aggtaaaata actggaaccg atgtgaaatc tcgtttagca ccaactcttg cagcagaaat
     2761 gtatgcatac aaaaaaggtg cagattatct ccgcacccat gatgttaagt ctttatcaga
     2821 tgccttgaaa atatccaaag ccctaggtta gttttatttt tttagctttc taaatgaata
     2881 tgctatactt gctctgaagt tgtgttggcg tacttgactt aggtctggat ctttcgaact
     2941 gttactaaga gggtaatcat agccaaacat aaactggaaa tgtcctaatt ctaaacctgt
     3001 tccaatacct acactataat caagaggact taaacttcca tcacttccaa aaggttttgt
     3061 gtacttctct tgagttttcg tagctaaata gtagtgtttg ttggtaaatc caaataatcc
     3121 aatattcaat cttgcgaccg ggaaagtcct cttgaaagta ccacaagttc gcgggatgga
     3181 gttttatccc agctgcatcg agaaaggcat gcgcagtgag cgtgctctca agctcgccat
     3241 cgccgaaatg tatgtcaaag gagtaagtac ccgcagggtc tcggatatcg tcgaaattct
     3301 ttgtggcacc gaagtcagct cgtcccaggt cagcaggctg gcaaaggagc tcgatgaaga
     3361 gattacgtct tggaaggcgc agcctgtcgg acagattcaa tacttggtac ttgatgcgac
     3421 ctatgaatcg gttcgcgtcg gttcccatgt ggtcaagcag gcgcttctag tggctattgg
     3481 cgttgattac agcgggaatc ggcatattct tgacgccgaa gtcgcgaaca gtgaggcaga
     3541 ggtaaactgg cgttcctttc tcgagggtct cgtacgacga gggatgcacg gcctgcgaat
     3601 gatcaccagt gatgaccact caggactgcg cgcggcaatc gatgctgtct tccctggaat
     3661 tctgtggcaa cgctgccagt ttcatctgca gcagaatgcc cactcctacg tcacgaaaaa
     3721 agatgagatc ccgctgatag ccgctgatat tcggaaggtg ttcaatcgga atatgtcaag
     3781 atagtttatg ccagattttt gagaggtttg catcaagcag ccttcgaaag aggacggcat
     3841 gacattgaga ccggcaaggc gtcgtagata cgcactttcc cagtacgcca ccgtaagggg
     3901 tttttctctt tggcagcaag aatggtttgg tttctttttt cctcggcgcc gtaggcgtcc
     3961 gactaacacc tgaattaagc cgcgccgcga agcggcgtcg gcttgaatga actgttagat
     4021 gccagcccga tcaatgtgcg ctgaccttgg atagcagatt tagaacggcg acgccactaa
     4081 cgataagtcc catgccaacg aacgcccaca agtctagttt ctggccatgg aagatccaag
     4141 cgatagctgc cacaagtacg atgccgaggc cagcccaaac agcataagca atgccgaccg
     4201 ggatggactt gagtgcgaga gagaggaaat agaacgcaag cccgtagcca gccacaacta
     4261 caacagaagg aactaacttg gtgaatccat ggctggactt cagtgcggaa gttgcgacga
     4321 cctcaccaaa tattgcaata gccagaaaga gccagttctt cacgtgcaat ctcctctacg
     4381 gtatgaagga taaatagtgg tggctatgag ttgccaaaaa cagtcttgcg gctgtcgatt
     4441 ttctgtgagc atacgcaacg ccaaatctgg catctaacgc ttgagttaag ccgcgccgcg
     4501 aagcggcgt
//
LOCUS       DADMIB010000468         4298 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.253, whole genome shotgun sequence.
ACCESSION   DADMIB010000468 DADMIB010000000
VERSION     DADMIB010000468.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4298
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.253"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            561..800
                     /locus_tag="JNZ89_004738"
     CDS             561..800
                     /locus_tag="JNZ89_004738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1819 family protein"
                     /protein_id="HAY8938315.1"
                     /translation="MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKEN
                     VLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC"
     gene            complement(988..1965)
                     /gene="intI2"
                     /locus_tag="JNZ89_004739"
                     /pseudo
     CDS             complement(988..1965)
                     /gene="intI2"
                     /locus_tag="JNZ89_004739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023994230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class 2 integron integrase IntI2"
     gene            2297..2770
                     /locus_tag="JNZ89_004740"
     CDS             2297..2770
                     /locus_tag="JNZ89_004740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA1"
                     /protein_id="HAY8938316.1"
                     /translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEI
                     YKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
     gene            2865..3389
                     /gene="sat2"
                     /locus_tag="JNZ89_004741"
     CDS             2865..3389
                     /gene="sat2"
                     /locus_tag="JNZ89_004741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000704156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat2"
                     /protein_id="HAY8938317.1"
                     /translation="MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSP
                     YRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAH
                     SLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNET
                     AMYWYWFSGAQDDA"
     gene            3447..4238
                     /gene="aadA1"
                     /locus_tag="JNZ89_004742"
     CDS             3447..4238
                     /gene="aadA1"
                     /locus_tag="JNZ89_004742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA1"
                     /protein_id="HAY8938318.1"
                     /translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
                     HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPA
                     QYQPVILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
BASE COUNT         1209 a          944 c         1001 g         1144 t
ORIGIN      
        1 aaagagccag tcagttgctt aactgactgg cattacaccg gtcggcagcc ctgtgggcgg
       61 acaaaatagt tgggaactgg gaggggtgga aatggagttt ttaaggatta tttagggaag
      121 agtgacaaaa tagatgggaa ctgggtgtag cgtcgtaagc taatacgaaa attaaaaatg
      181 acaaaatagt ttggaactag atttcactta tctggttaac taatctagct aacctgccgc
      241 tcagcttagt acgatcctat atccaactga tcataatcct ttcatcagta tcccaaatta
      301 aatccccctc ctagactgcc tcaccaacac tttacagtga tcccgtattt ccggacaggt
      361 gattgatttt tttcgcttgt acaggtgtta agccacagtt atcttgatgt ggacattatg
      421 cattgtaata gcccattaac atgcgctaag agcataaatt aatatacagt aacaagcatt
      481 acgaggtgct aatgtttgga aagcagcctc ttccaactac aataataagt taactatcct
      541 ccacccacaa ataattacaa atgacccctt tccgctataa ctccgatctc accagcggct
      601 cgctacaaac ccgagagtgt cgcattatta ctggcttgtt actccaagag cttgatgaag
      661 ctgcctggga taaagccatg tataaggaaa atgtgcttca gaaacgcacg caatctacgg
      721 taagacgtat ttcttcagcg cttagaaaac gcctagaaca cctaagctct gacttttggg
      781 cttttgcgtt tttatgttag gcattgtctg gcaactggag gaagtgtaat gaccatgaat
      841 ggtcactgtg attgacagta tcttgcttaa acttatctga acaatggtag aactggctca
      901 tatttatccc ctctatgatt gtttatcttt ttcaccataa aaagtatcag gggctactca
      961 gggctacata aagatattta tctactttta ctgattgata agtagcatca gtccatccgc
     1021 aggactggtg gtgccggcaa aatgctgacc caacacatgc gtatagattt gcgtggtctt
     1081 aacatcgtta tgccctaaga gttcttgcac agtgcgaata tcacgccccg cttgtaatag
     1141 atgcgtagca aacgagtgac gaaatgtatg acaagtgaca cgcttgctaa cgatgcctgc
     1201 tttttgtacg gctgccttca atgcctttcg cgcaacggag tcatgcagat gatggcggca
     1261 taatttgccg ttatacgggt ggttgcagag cgtgctggag ggaaagacaa acatccacgc
     1321 cgcttgtcga taagcagaag ggtatttgtg atctaaagca aaaggcagcg atggccctac
     1381 gccttgtaag ttgtcgtctt gctgaataag ccgcgcttgc tcaatgagtt attttattgc
     1441 tgggattagg cgcgtgggca gtaggctgtt tctgcttttc ccacccttac cgtcatgcac
     1501 agtgatgcag ccattatcaa aatcaaaatc tttaacccgc aaacgcaagc attcattaat
     1561 gcgcaaacct gcaccataca gcagcgtaaa aataacttgg ttgcgagtat ccataacctg
     1621 caaaatgcgt tgcacttcat ttgcagagat aacagagggt agccgtctag gcttgcttgc
     1681 agggatataa tcaatatcgc ccaacggctg ttgtaaaaac ctgttgtaca aaaaagctag
     1741 ggcatttaaa gcgattttct gcgtgtttat ggctacatgt ctgctgtttg ctaagctgga
     1801 taaaaacagc ctgacctctt cactgcccat ggtctgagga tgacgttttt tgtgaaacag
     1861 aataaaacgc ttaatccagt gcaggtaagt tttttcagtt ttcagcgcat aacctttttg
     1921 tcgcatatcc gtgcgtatag aatttaaaaa tggactgtta gacataaaac gctccttgtc
     1981 ttgcaactgt ctgcctatac agcctattct agctgggatt taaaaaagtg cctgtttttt
     2041 acgcctagag atgcttgttt accggtagag ttttaattta atgctaaata aattaaaatg
     2101 ttatgagttc tttgggtgag ataatgtgca tcgtgcaagc aggatagacg gcatgcacga
     2161 tttgtaataa cagagtgtct tgtattttta aagaaagtct atttaataca agtgattata
     2221 ttaattaacg gtaagcatca gcgggtgaca aaacgagcat gcttactaat aaaatgttaa
     2281 cctctgagga agaattgtga aactatcact aatggtagct atatcgaaga atggagttat
     2341 cgggaatggc cctgatattc catggagtgc caaaggtgaa cagctcctgt ttaaagctat
     2401 tacctataac caatggctgt tggttggacg caagactttt gaatcaatgg gagcattacc
     2461 caaccgaaag tatgcggtcg taacacgttc aagttttaca tctgacaatg agaacgtatt
     2521 gatctttcca tcaattaaag atgctttaac caacctaaag aaaataacgg atcatgtcat
     2581 tgtttcaggt ggtggggaga tatacaaaag cctgatcgat caagtagata cactacatat
     2641 atctacaata gacatcgagc cggaaggtga tgtttacttt cctgaaatcc ccagcaattt
     2701 taggccagtt tttacccaag acttcgcctc taacataaat tatagttacc aaatctggca
     2761 aaagggttaa caagtggcag caacggattc gcaaacctgt cacgcctttt gtaccaaaag
     2821 ccgcgccagg tttgcgatcc gctgtgccag gcgttaggcg tcatatgaag atttcggtga
     2881 tccctgagca ggtggcggaa acattggatg ctgagaacca tttcattgtt cgtgaagtgt
     2941 tcgatgtgca cctatccgac caaggctttg aactatctac cagaagtgtg agcccctacc
     3001 ggaaggatta catctcggat gatgactctg atgaagactc tgcttgctat ggcgcattca
     3061 tcgaccaaga gcttgtcggg aagattgaac tcaactcaac atggaacgat ctagcctcta
     3121 tcgaacacat tgttgtgtcg cacacgcacc gaggcaaagg agtcgcgcac agtctcatcg
     3181 aatttgcgaa aaagtgggca ctaagcagac agctccttgg catacgatta gagacacaaa
     3241 cgaacaatgt acctgcctgc aatttgtacg caaaatgtgg ctttactctc ggcggcattg
     3301 acctgttcac gtataaaact agacctcaag tctcgaacga aacagcgatg tactggtact
     3361 ggttctcggg agcacaggat gacgcctaac aattcattca agccgacacc gcttcgcggc
     3421 gcggcttaat tcaggagtta aacatcatga gggaagcggt gatcgccgaa gtatcgactc
     3481 aactatcaga ggtagttggc gtcatcgagc gccatctcga accgacgttg ctggccgtac
     3541 atttgtacgg ctccgcagtg gatggcggcc tgaagccaca cagtgatatt gatttgctgg
     3601 ttacggtgac cgtaaggctt gatgaaacaa cgcggcgagc tttgatcaac gaccttttgg
     3661 aaacttcggc ttcccctgga gagagcgaga ttctccgcgc tgtagaagtc accattgttg
     3721 tgcacgacga catcattccg tggcgttatc cagctaagcg cgaactgcaa tttggagaat
     3781 ggcagcgcaa tgacattctt gcaggtatct tcgagccagc cacgatcgac attgatctgg
     3841 ctatcttgct gacaaaagca agagaacata gcgttgcctt ggtaggtcca gcggcggagg
     3901 aactctttga tccggttcct gaacaggatc tatttgaggc gctaaatgaa accttaacgc
     3961 tatggaactc gccgcccgac tgggctggcg atgagcgaaa tgtagtgctt acgttgtccc
     4021 gcatttggta cagcgcagta accggcaaaa tcgcgccgaa ggatgtcgct gccgactggg
     4081 caatggagcg cctgccggcc cagtatcagc ccgtcatact tgaagctaga caggcttatc
     4141 ttggacaaga agaagatcgc ttggcctcgc gcgcagatca gttggaagaa tttgttcact
     4201 acgtgaaagg cgagatcacc aaggtagtcg gcaaataatg tctaacaatt cgttcaagcc
     4261 gacgccgctt cgcggcgcgg cttaactcaa gcgttaga
//
LOCUS       DADMIB010000469         4295 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.254, whole genome shotgun sequence.
ACCESSION   DADMIB010000469 DADMIB010000000
VERSION     DADMIB010000469.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4295
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.254"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            561..800
                     /locus_tag="JNZ89_004743"
     CDS             561..800
                     /locus_tag="JNZ89_004743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1819 family protein"
                     /protein_id="HAY8938319.1"
                     /translation="MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKEN
                     VLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC"
     gene            complement(988..1965)
                     /gene="intI2"
                     /locus_tag="JNZ89_004744"
                     /pseudo
     CDS             complement(988..1965)
                     /gene="intI2"
                     /locus_tag="JNZ89_004744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023994230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class 2 integron integrase IntI2"
     gene            2297..2770
                     /locus_tag="JNZ89_004745"
     CDS             2297..2770
                     /locus_tag="JNZ89_004745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA1"
                     /protein_id="HAY8938320.1"
                     /translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEI
                     YKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
     gene            2865..3389
                     /gene="sat2"
                     /locus_tag="JNZ89_004746"
     CDS             2865..3389
                     /gene="sat2"
                     /locus_tag="JNZ89_004746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000704156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat2"
                     /protein_id="HAY8938321.1"
                     /translation="MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSP
                     YRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAH
                     SLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNET
                     AMYWYWFSGAQDDA"
     gene            3447..4235
                     /gene="aadA1"
                     /locus_tag="JNZ89_004747"
     CDS             3447..4235
                     /gene="aadA1"
                     /locus_tag="JNZ89_004747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA1"
                     /protein_id="HAY8938322.1"
                     /translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
                     HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPA
                     QYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK"
BASE COUNT         1206 a          944 c         1001 g         1144 t
ORIGIN      
        1 aaagagccag tcagttgctt aactgactgg cattacaccg gtcggcagcc ctgtgggcgg
       61 acaaaatagt tgggaactgg gaggggtgga aatggagttt ttaaggatta tttagggaag
      121 agtgacaaaa tagatgggaa ctgggtgtag cgtcgtaagc taatacgaaa attaaaaatg
      181 acaaaatagt ttggaactag atttcactta tctggttaac taatctagct aacctgccgc
      241 tcagcttagt acgatcctat atccaactga tcataatcct ttcatcagta tcccaaatta
      301 aatccccctc ctagactgcc tcaccaacac tttacagtga tcccgtattt ccggacaggt
      361 gattgatttt tttcgcttgt acaggtgtta agccacagtt atcttgatgt ggacattatg
      421 cattgtaata gcccattaac atgcgctaag agcataaatt aatatacagt aacaagcatt
      481 acgaggtgct aatgtttgga aagcagcctc ttccaactac aataataagt taactatcct
      541 ccacccacaa ataattacaa atgacccctt tccgctataa ctccgatctc accagcggct
      601 cgctacaaac ccgagagtgt cgcattatta ctggcttgtt actccaagag cttgatgaag
      661 ctgcctggga taaagccatg tataaggaaa atgtgcttca gaaacgcacg caatctacgg
      721 taagacgtat ttcttcagcg cttagaaaac gcctagaaca cctaagctct gacttttggg
      781 cttttgcgtt tttatgttag gcattgtctg gcaactggag gaagtgtaat gaccatgaat
      841 ggtcactgtg attgacagta tcttgcttaa acttatctga acaatggtag aactggctca
      901 tatttatccc ctctatgatt gtttatcttt ttcaccataa aaagtatcag gggctactca
      961 gggctacata aagatattta tctactttta ctgattgata agtagcatca gtccatccgc
     1021 aggactggtg gtgccggcaa aatgctgacc caacacatgc gtatagattt gcgtggtctt
     1081 aacatcgtta tgccctaaga gttcttgcac agtgcgaata tcacgccccg cttgtaatag
     1141 atgcgtagca aacgagtgac gaaatgtatg acaagtgaca cgcttgctaa cgatgcctgc
     1201 tttttgtacg gctgccttca atgcctttcg cgcaacggag tcatgcagat gatggcggca
     1261 taatttgccg ttatacgggt ggttgcagag cgtgctggag ggaaagacaa acatccacgc
     1321 cgcttgtcga taagcagaag ggtatttgtg atctaaagca aaaggcagcg atggccctac
     1381 gccttgtaag ttgtcgtctt gctgaataag ccgcgcttgc tcaatgagtt attttattgc
     1441 tgggattagg cgcgtgggca gtaggctgtt tctgcttttc ccacccttac cgtcatgcac
     1501 agtgatgcag ccattatcaa aatcaaaatc tttaacccgc aaacgcaagc attcattaat
     1561 gcgcaaacct gcaccataca gcagcgtaaa aataacttgg ttgcgagtat ccataacctg
     1621 caaaatgcgt tgcacttcat ttgcagagat aacagagggt agccgtctag gcttgcttgc
     1681 agggatataa tcaatatcgc ccaacggctg ttgtaaaaac ctgttgtaca aaaaagctag
     1741 ggcatttaaa gcgattttct gcgtgtttat ggctacatgt ctgctgtttg ctaagctgga
     1801 taaaaacagc ctgacctctt cactgcccat ggtctgagga tgacgttttt tgtgaaacag
     1861 aataaaacgc ttaatccagt gcaggtaagt tttttcagtt ttcagcgcat aacctttttg
     1921 tcgcatatcc gtgcgtatag aatttaaaaa tggactgtta gacataaaac gctccttgtc
     1981 ttgcaactgt ctgcctatac agcctattct agctgggatt taaaaaagtg cctgtttttt
     2041 acgcctagag atgcttgttt accggtagag ttttaattta atgctaaata aattaaaatg
     2101 ttatgagttc tttgggtgag ataatgtgca tcgtgcaagc aggatagacg gcatgcacga
     2161 tttgtaataa cagagtgtct tgtattttta aagaaagtct atttaataca agtgattata
     2221 ttaattaacg gtaagcatca gcgggtgaca aaacgagcat gcttactaat aaaatgttaa
     2281 cctctgagga agaattgtga aactatcact aatggtagct atatcgaaga atggagttat
     2341 cgggaatggc cctgatattc catggagtgc caaaggtgaa cagctcctgt ttaaagctat
     2401 tacctataac caatggctgt tggttggacg caagactttt gaatcaatgg gagcattacc
     2461 caaccgaaag tatgcggtcg taacacgttc aagttttaca tctgacaatg agaacgtatt
     2521 gatctttcca tcaattaaag atgctttaac caacctaaag aaaataacgg atcatgtcat
     2581 tgtttcaggt ggtggggaga tatacaaaag cctgatcgat caagtagata cactacatat
     2641 atctacaata gacatcgagc cggaaggtga tgtttacttt cctgaaatcc ccagcaattt
     2701 taggccagtt tttacccaag acttcgcctc taacataaat tatagttacc aaatctggca
     2761 aaagggttaa caagtggcag caacggattc gcaaacctgt cacgcctttt gtaccaaaag
     2821 ccgcgccagg tttgcgatcc gctgtgccag gcgttaggcg tcatatgaag atttcggtga
     2881 tccctgagca ggtggcggaa acattggatg ctgagaacca tttcattgtt cgtgaagtgt
     2941 tcgatgtgca cctatccgac caaggctttg aactatctac cagaagtgtg agcccctacc
     3001 ggaaggatta catctcggat gatgactctg atgaagactc tgcttgctat ggcgcattca
     3061 tcgaccaaga gcttgtcggg aagattgaac tcaactcaac atggaacgat ctagcctcta
     3121 tcgaacacat tgttgtgtcg cacacgcacc gaggcaaagg agtcgcgcac agtctcatcg
     3181 aatttgcgaa aaagtgggca ctaagcagac agctccttgg catacgatta gagacacaaa
     3241 cgaacaatgt acctgcctgc aatttgtacg caaaatgtgg ctttactctc ggcggcattg
     3301 acctgttcac gtataaaact agacctcaag tctcgaacga aacagcgatg tactggtact
     3361 ggttctcggg agcacaggat gacgcctaac aattcattca agccgacacc gcttcgcggc
     3421 gcggcttaat tcaggagtta aacatcatga gggaagcggt gatcgccgaa gtatcgactc
     3481 aactatcaga ggtagttggc gtcatcgagc gccatctcga accgacgttg ctggccgtac
     3541 atttgtacgg ctccgcagtg gatggcggcc tgaagccaca cagtgatatt gatttgctgg
     3601 ttacggtgac cgtaaggctt gatgaaacaa cgcggcgagc tttgatcaac gaccttttgg
     3661 aaacttcggc ttcccctgga gagagcgaga ttctccgcgc tgtagaagtc accattgttg
     3721 tgcacgacga catcattccg tggcgttatc cagctaagcg cgaactgcaa tttggagaat
     3781 ggcagcgcaa tgacattctt gcaggtatct tcgagccagc cacgatcgac attgatctgg
     3841 ctatcttgct gacaaaagca agagaacata gcgttgcctt ggtaggtcca gcggcggagg
     3901 aactctttga tccggttcct gaacaggatc tatttgaggc gctaaatgaa accttaacgc
     3961 tatggaactc gccgcccgac tgggctggcg atgagcgaaa tgtagtgctt acgttgtccc
     4021 gcatttggta cagcgcagta accggcaaaa tcgcgccgaa ggatgtcgct gccgactggg
     4081 caatggagcg cctgccggcc cagtatcagc ccgtcatact tgaagctagg caggcttatc
     4141 ttggacaaga agatcgcttg gcctcgcgcg cagatcagtt ggaagaattt gttcactacg
     4201 tgaaaggcga gatcaccaag gtagtcggca aataatgtct aacaattcgt tcaagccgac
     4261 gccgcttcgc ggcgcggctt aactcaagcg ttaga
//
LOCUS       DADMIB010000470         4020 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.262, whole genome shotgun sequence.
ACCESSION   DADMIB010000470 DADMIB010000000
VERSION     DADMIB010000470.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4020
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.262"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..245
                     /locus_tag="JNZ89_004748"
     CDS             <1..245
                     /locus_tag="JNZ89_004748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY8938323.1"
                     /translation="RYRASGLNLVTAAIVLWNTVYLERATQGLVEAGKPVDGELLQFL
                     SPLGWEHINLTGDYVWRQSRRLEDGKFRPLRMPGKP"
     gene            303..545
                     /locus_tag="JNZ89_004749"
     CDS             303..545
                     /locus_tag="JNZ89_004749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000844627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase"
                     /protein_id="HAY8938324.1"
                     /translation="MKTAALDLARERQAHEAGARTRATAHERTPQQERQKAAREAERG
                     REAWTLGQGMKKPVAGCYGRLTRWKGGGDVVYMALL"
     gene            complement(577..1227)
                     /gene="tetR(A)"
                     /locus_tag="JNZ89_004750"
     CDS             complement(577..1227)
                     /gene="tetR(A)"
                     /locus_tag="JNZ89_004750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000164043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(A)"
                     /protein_id="HAY8938325.1"
                     /translation="MTKLQPNTVIRAALDLLNEVGVDGLTTRKLAERLGVQQPALYWH
                     FRNKRALLDALAEAMLAENHTHSVPRADDDWRSFLIGNARSFRQALLAYRDGARIHAG
                     TRPGAPQMETADAQLRFLCEAGFSAGDAVNALMTISYFTVGAVLEEQAGDSDAGERGG
                     TVEQAPLSPLLRAAIDAFDEADPDAAFEQGLAVIVDGLAKRRLVVRNVEGPRKGDD"
     gene            1333..2532
                     /gene="tet(A)"
                     /locus_tag="JNZ89_004751"
     CDS             1333..2532
                     /gene="tet(A)"
                     /locus_tag="JNZ89_004751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000804064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(A)"
                     /protein_id="HAY8938326.1"
                     /translation="MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAH
                     YGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIG
                     RIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGDFSPH
                     APFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAV
                     FFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE
                     RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG
                     QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSG
                     AGQRADR"
     gene            complement(2564..3448)
                     /locus_tag="JNZ89_004752"
     CDS             complement(2564..3448)
                     /locus_tag="JNZ89_004752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000058717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HAY8938327.1"
                     /translation="MSLRTPDLLFTAIAPAIWGSTYIVTTQYLPNFSPMTVAMLRALP
                     AGLLLVMIVRQIPTGIWWMRIFILGALNISLFWSLLFISVYRLPGGVAATVGAVQPLM
                     VVFISAALLGSPIRLMAVLGAICGTAGVALLVLTPNAALDPVGVAAGLAGAVSMAFGT
                     VLTRKWQPPVPLLTFTAWQLAAGGLLLVPVALVFDPPIPMPTGTNVLGLAWLGLIGAG
                     LTYFLWFRGISRLEPTVVSLLGFLSPGTAVLLGWLFLDQTLSALQIIGVLLVIGSIWL
                     GQRSNRTPRARIACRKSP"
     gene            complement(3586..3978)
                     /locus_tag="JNZ89_004753"
     CDS             complement(3586..3978)
                     /locus_tag="JNZ89_004753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001407380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HAY8938328.1"
                     /translation="MLFPNFSLGEEYEHAPPATNRQISPYLPSGRFRTGLPVEGLAIE
                     RGDLFYACPRASVFYGTALDADLRTRGVSTLVMAGISTTGVVLSSVAWASDADYDVRL
                     VQDCCYDPDRDAHEALLRSGFGGRVQVV"
BASE COUNT          765 a         1260 c         1253 g          742 t
ORIGIN      
        1 agcgctaccg ggccagcggc ctcaacctgg tgacggcggc tatcgtgctg tggaacacgg
       61 tgtacctgga acgcgccacc caggggttgg tcgaggccgg caagccggtg gacggcgagc
      121 tgctgcaatt cctgtcgccg ctgggctggg agcacatcaa cctaaccggc gattacgtct
      181 ggcggcagag ccgcagactg gaagacggga agtttcggcc cttacggatg cccggaaaac
      241 cttagcgtac gattttttcc gaattctgcg ggctccccta tctcatctgc gcaaggcaga
      301 acgtgaagac ggccgccctg gacctcgccc gcgagcgcca ggcgcacgag gccggcgcgc
      361 ggacccgcgc cacggcccac gagcggacgc cgcagcagga gcgccagaag gccgccagag
      421 aggccgagcg cggccgtgag gcttggacgc tagggcaggg catgaaaaag cccgtagcgg
      481 gctgctacgg gcgtctgacg cggtggaaag ggggagggga tgttgtctac atggctctgc
      541 tgtagtgagt gggttgcgct ccggcagcgg tcctgatcaa tcgtcaccct ttctcggtcc
      601 ttcaacgttc ctgacaacga gcctcctttt cgccaatcca tcgacaatca ccgcgagtcc
      661 ctgctcgaac gctgcgtccg gatcggcttc gtcgaaggcg tctatcgcgg cccgcaacag
      721 cggcgagagc ggagcctgtt caacggtgcc gccgcgctcg ccggcatcgc tgtcgccggc
      781 ctgctcctca agcacggccc caacagtgaa gtagctgatt gtcatcagcg cattgacggc
      841 gtccccggcc gaaaaacccg cctcgcagag gaagcgaagc tgcgcgtcgg ccgtttccat
      901 ctgcggtgcg cccggtcgcg tgccggcatg gatgcgcgcg ccatcgcggt aggcgagcag
      961 cgcctgcctg aagctgcggg cattcccgat cagaaatgag cgccagtcgt cgtcggctct
     1021 cggcaccgaa tgcgtatgat tctccgccag catggcttcg gccagtgcgt cgagcagcgc
     1081 ccgcttgttc ctgaagtgcc agtaaagcgc cggctgctga acccccaacc gttccgccag
     1141 tttgcgtgtc gtcagaccgt ctacgccgac ctcgttcaac aggtccaggg cggcacggat
     1201 cactgtattc ggctgcaact ttgtcatgct tgacacttta tcactgataa acataatatg
     1261 tccaccaact tatcagtgat aaagaatccg cgcgttcaat cggaccagcg gaggctggtc
     1321 cggaggccag acgtgaaacc caacagaccc ctgatcgtaa ttctgagcac tgtcgcgctc
     1381 gacgctgtcg gcatcggcct gattatgccg gtgctgccgg gcctcctgcg cgatctggtt
     1441 cactcgaacg acgtcaccgc ccactatggc attctgctgg cgctgtatgc gttgatgcaa
     1501 tttgcctgcg cacctgtgct gggcgcgctg tcggatcgtt tcgggcggcg gccggtcttg
     1561 ctcgtctcgc tggccggcgc tgctgtcgac tacgccatca tggcgacggc gcctttcctt
     1621 tgggttctct atatcgggcg gatcgtggcc ggcatcaccg gggcgactgg ggcggtagcc
     1681 ggcgcttata ttgccgatat cactgatggc gatgagcgcg cgcggcactt cggcttcatg
     1741 agcgcctgtt tcgggttcgg gatggtcgcg ggacctgtgc tcggtgggct gatgggcgat
     1801 ttctcccccc acgctccgtt cttcgccgcg gcagccttga acggcctcaa tttcctgacg
     1861 ggctgtttcc ttttgccgga gtcgcacaaa ggcgaacgcc ggccgttacg ccgggaggct
     1921 ctcaacccgc tcgcttcgtt ccggtgggcc cggggcatga ccgtcgtcgc cgccctgatg
     1981 gcggtcttct tcatcatgca acttgtcgga caggtgccgg ccgcgctttg ggtcattttc
     2041 ggcgaggatc gctttcactg ggacgcgacc acgatcggca tttcgcttgc cgcatttggc
     2101 attctgcatt cactcgccca ggcaatgatc accggccctg tagccgcccg gctcggcgaa
     2161 aggcgggcac tcatgctcgg aatgattgcc gacggcacag gctacatcct gcttgccttc
     2221 gcgacacggg gatggatggc gttcccgatc atggtcctgc ttgcttcggg tggcatcgga
     2281 atgccggcgc tgcaagcaat gttgtccagg caggtggatg aggaacgtca ggggcagctg
     2341 caaggctcac tggcggcgct caccagcctg acctcgatcg tcggacccct cctcttcacg
     2401 gcgatctatg cggcttctat aacaacgtgg aacgggtggg catggattgc aggcgctgcc
     2461 ctctacttgc tctgcctgcc ggcgctgcgt cgcgggcttt ggagcggcgc agggcaacga
     2521 gccgatcgct gatcgtggaa acgataggcc tatgccatgc gggtcaaggc gacttccggc
     2581 aagctatacg cgccctagga gtgcggttgg aacgttggcc cagccagata ctcccgatca
     2641 cgagcaggac gccgatgatt tgaagcgcac tcagcgtctg atccaagaac aaccatccta
     2701 gcaacacggc ggtccccggg ctgagaaagc ccagtaagga aacaactgta ggttcgagtc
     2761 gcgagatccc ccggaaccaa aggaagtagg ttaaacccgc tccgatcagg ccgagccacg
     2821 ccaggccgag aacattggtt cctgtaggca tcgggattgg cggatcaaac actaaagcta
     2881 ctggaacgag cagaagtcct ccggccgcca gttgccaggc ggtaaaggtg agcagaggca
     2941 cgggaggttg ccacttgcgg gtcagcacgg ttccgaacgc catggaaacc gcccccgcca
     3001 ggcccgctgc gacgccgaca ggatctagcg ctgcgtttgg tgtcaacacc aacagcgcca
     3061 cgcccgcagt tccgcaaata gcccccagga ccgccatcaa tcgtatcggg ctacctagca
     3121 gagcggcaga gatgaacacg accatcagcg gctgcacagc gcctaccgtc gccgcgaccc
     3181 cgcccggcag gcggtagacc gaaataaaca acaagctcca gaatagcgaa atattaagtg
     3241 cgccgaggat gaagatgcgc atccaccaga ttcccgttgg aatctgtcgg acgatcatca
     3301 cgagcaataa acccgccggc aacgcccgca gcatcgcgac cgtcatcggt gagaagttcg
     3361 gcaggtattg ggtggtgaca atgtaggtgc tgccccaaat ggcaggtgct atcgctgtga
     3421 acaataaatc gggcgtgcgt aatgacatgc gattacaaga cctccgctac ggcgatgggt
     3481 ttttgagagt tgcaggcgcc gcgatgaccg caccctgact tggactggcc ctgcctcgca
     3541 ccaatccacc tgcggctatg gccgcgatca tgcgaggccc gaaaattaca cgacctgtac
     3601 acgtccgccg aacccggaac gcaacagagc ttcgtgggca tcccgatccg ggtcgtagca
     3661 gcagtcctgg accaaacgca cgtcgtagtc cgcatcacta gcccaggcga cgcttgaaag
     3721 aacaacgccg gtggtgctta tcccggccat gacaagcgtg cttacgccgc gcgtccgaag
     3781 gtcggcgtcg agcgccgtgc cataaaagac gctggctcgc ggacatgcat agaaaaggtc
     3841 gccccgttcg atcgcaagcc cttcgacggg cagaccggtg cgaaatcgtc cgctcgggag
     3901 atacggtgag atttggcgat tcgtcgccgg cggcgcatgt tcatactctt cgccgagcga
     3961 aaagttgggg aacagcacgg gccggccgcg caaggcgtgc tggcagccgt gcagaccctg
//
LOCUS       DADMIB010000471         3218 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.285, whole genome shotgun sequence.
ACCESSION   DADMIB010000471 DADMIB010000000
VERSION     DADMIB010000471.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.285"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            75..527
                     /locus_tag="JNZ89_004754"
     CDS             75..527
                     /locus_tag="JNZ89_004754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000237816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)--rifampin ADP-ribosyltransferase Arr-2"
                     /protein_id="HAY8938329.1"
                     /translation="MVKDWIPISHDNYKQVQGPFYHGTKANLAIGDLLTTGFISHFED
                     GRILKHIYFSALMEPAVWGAELAMSLSGLEGRGYIYIVEPTGPFEDDPNLTNKKFPGN
                     PTQSYRTCEPLRIVGVVEDWEGHPVELIRGMLDSLEDLKRRGLHVIED"
     gene            848..2107
                     /locus_tag="JNZ89_004755"
     CDS             848..2107
                     /locus_tag="JNZ89_004755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001256773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol efflux MFS transporter CmlA5"
                     /protein_id="HAY8938330.1"
                     /translation="MRSKNFSWRYSLAATVLLLSPFDLLASLGMDMYLPAVPFMPNAL
                     GTTASTIQLTLTTYLVMIGAGQLLFGPLSDRLGRRPVLLGGGLAYVVASMGLALTSSA
                     EVFLGLRILQACGASACLVSTFATVRDIYAGREESNVIYGILGSMLAMVPAVGPLLGA
                     LVDMWLGWRAIFAFLGLGMIAASAAAWRFWPETRVQRVAGLQWSQLLLPVKCLNFWLY
                     TLCYAAGMGSFFVFFSIAPGLMMGRQGVSQLGFSLLFATVAIAMVFTARFMGRVIPKW
                     GSPSVLRMGMGCLIAGAVLLAITEIWASQSVLGFIAPMWLVGIGVATAVSVSPNGALR
                     GFDHVAGTVTAVYFCLGGVLLGSIGTLIISLLPRNTAWPVVVYCLTLATVVLGLSCVS
                     RVKGSRGQGEHDVVALQSAESTSNPNR"
     gene            2372..3172
                     /locus_tag="JNZ89_004756"
     CDS             2372..3172
                     /locus_tag="JNZ89_004756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032488483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-10"
                     /protein_id="HAY8938331.1"
                     /translation="MKTFAAYVIIACLSSTALAGSITENTSWNKEFSAEAVNGVFVLC
                     KSSSKSCATNDLARASKEYLPASTFKIPNAIIGLETGVIKNEHQVFKWDGKPRAMKQW
                     ERDLTLRGAIQVSAVPVFQQIAREVGEVRMQKYLKKFSYGNQNISGGIDKFWLEGQLR
                     ISAVNQVEFLESLYLNKLSASKENQLIVKEALVTEAAPEYLVHSKTGFSGVGTESNPG
                     VAWWVGWVEKETEVYFFAFNMDIDNESKLPLRKSIPTKIMESEGIIGG"
BASE COUNT          776 a          732 c          851 g          859 t
ORIGIN      
        1 acgatgttac gcagcagggc agtcgcccta aaacaaagtt atgcagccaa atcccaacaa
       61 ttaagggtct taaaatggta aaagattgga ttcccatctc tcatgataat tacaagcagg
      121 tgcaaggacc gttctatcat ggaaccaaag ccaatttggc gattggtgac ttgctaacca
      181 cagggttcat ctctcatttc gaggacggtc gtattcttaa gcacatctac ttttcagcct
      241 tgatggagcc agcagtttgg ggagctgaac ttgctatgtc actgtctggc ctcgagggtc
      301 gcggctacat atacatagtt gagccaacag gaccgttcga agacgatccg aatcttacga
      361 acaaaaaatt tcccggtaat ccaacacagt cctatagaac ctgcgaaccc ttgagaattg
      421 ttggcgttgt tgaagactgg gaggggcatc ctgttgaatt aataagggga atgttggatt
      481 cgttagagga cttaaagcgc cgtggtttac acgtcattga agactagtcc tttgcataac
      541 aaagccatca aaccggacgc cagagattcc gcgcctgttg cgcatggctt cgccatttta
      601 tgcgcaatag gcgcgccacc ctgtcgccgt ttatggcggc gttgggcgca caataaggct
      661 cctcgcagag ttgcttgaaa gttgttacga ttcaaattca atcatgagat agtcagcaga
      721 tgagcacttc caagaacgca gacaagtaag ccgcagcaac cttcattttt cggttgttgc
      781 ggcgttctca tgaatccttt tgctctacgg gagcgccgcc aaatcctttg ttcaaggaga
      841 tggtttcgtg cgctcaaaaa actttagttg gcggtactcc cttgccgcca cggtgttgtt
      901 gttatcaccg ttcgatttat tggcatcact cggcatggac atgtacttgc cagcagtgcc
      961 gtttatgcca aacgcgcttg gtacgacagc gagcacaatt cagcttacgc tgacaacgta
     1021 cttggtcatg attggtgccg gtcagctctt gtttggaccg ctatcggacc gactggggcg
     1081 ccgccccgtt ctactgggag gtggcctcgc ctacgttgtg gcgtcaatgg gcctcgctct
     1141 tacgtcatcg gctgaagtct ttctggggct tcggattctt caggcttgtg gtgcctcggc
     1201 gtgccttgtt tccacatttg caacagtacg tgacatttac gcaggtcgcg aggaaagtaa
     1261 tgtcatttac ggcatactcg gatccatgct ggccatggtc ccggcggtag gcccattgct
     1321 cggagcgctc gtcgacatgt ggcttgggtg gcgggctatc tttgcgtttc taggtttggg
     1381 catgatcgct gcatctgcag cagcgtggcg attctggcct gaaacccggg tgcaacgagt
     1441 tgcgggcttg caatggtcgc agctgctact ccccgttaag tgcctgaact tctggttgta
     1501 cacgttgtgt tacgccgctg gaatgggtag cttcttcgtc tttttctcca ttgcgcccgg
     1561 actaatgatg ggcaggcaag gtgtgtctca gcttggcttc agcctgctgt tcgccacagt
     1621 ggcaattgcc atggtgttta cggctcgttt tatggggcgt gtgataccca agtggggcag
     1681 cccaagtgtc ttgcgaatgg gaatgggatg cctgatagct ggagcagtat tgcttgccat
     1741 caccgaaata tgggcttcgc agtccgtgtt aggctttatt gctccaatgt ggctagtggg
     1801 tattggtgtc gccacagcgg tatctgtgtc gcccaatggc gctcttcgag gattcgacca
     1861 tgttgctgga acggtcacgg cagtctactt ctgcttgggc ggtgtactgc taggaagcat
     1921 cggaacgttg atcatttcgc tgttgccgcg caacacggct tggccggttg tcgtgtactg
     1981 tttgaccctt gcaacagtcg tgctcggtct gtcttgtgtt tcccgagtga agggctctcg
     2041 cggccagggg gagcatgatg tggtcgcgct acaaagtgcg gaaagtacat caaatcccaa
     2101 tcgttgagag aatgtggcaa gctatcgccc aacaaatcgc tgcagccgac ccaaaaccgc
     2161 tacgcggttt cggtcggctg agctcaggcg ttaggcctcg ccgaagcgaa agatcgctac
     2221 ttgaagtgtt gacgcctttg ttttaaagtt tcgcgtctat ctttctgatt ttgttaaaaa
     2281 atcagacttt gattaatcat gttagacgtc agaggtattt tgacttaaac gcctctgagg
     2341 tcgaattaac gttagccacc aagaaggtgc catgaaaaca tttgccgcat atgtaattat
     2401 cgcgtgtctt tcgagtacgg cattagctgg ttcaattaca gaaaatacgt cttggaacaa
     2461 agagttctct gccgaagccg tcaatggtgt cttcgtgctt tgtaaaagta gcagtaaatc
     2521 ctgcgctacc aatgacttag ctcgtgcatc aaaggaatat cttccagcat caacatttaa
     2581 gatccccaac gcaattatcg gcctagaaac tggtgtcata aagaatgagc atcaggtttt
     2641 caaatgggac ggaaagccaa gagccatgaa gcaatgggaa agagacttga ccttaagagg
     2701 ggcaatacaa gtttcagctg ttcccgtatt tcaacaaatc gccagagaag ttggcgaagt
     2761 aagaatgcag aaatacctta aaaaattttc ctatggcaac cagaatatca gtggtggcat
     2821 tgacaaattc tggttggaag gccagcttag aatttccgca gttaatcaag tggagtttct
     2881 agagtctcta tatttaaata aattgtcagc atctaaagaa aaccagctaa tagtaaaaga
     2941 ggctttggta acggaggcgg cacctgaata tctagtgcat tcaaaaactg gtttttctgg
     3001 tgtgggaact gagtcaaatc ctggtgtcgc atggtgggtt gggtgggttg agaaggagac
     3061 agaggtttac tttttcgcct ttaacatgga tatagacaac gaaagtaagt tgccgctaag
     3121 aaaatccatt cccaccaaaa tcatggaaag tgagggcatc attggtggct aaaacaaagt
     3181 taaacatcat gagggaagtg gtgatcgccg aagtatcg
//
LOCUS       DADMIB010000472         1573 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.348, whole genome shotgun sequence.
ACCESSION   DADMIB010000472 DADMIB010000000
VERSION     DADMIB010000472.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.348"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            264..923
                     /locus_tag="JNZ89_004757"
     CDS             264..923
                     /locus_tag="JNZ89_004757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011152976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type A-1 chloramphenicol O-acetyltransferase"
                     /protein_id="HAY8938332.1"
                     /translation="MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAF
                     LKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETF
                     SSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNV
                     ANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
                     A"
     gene            complement(1124..1501)
                     /locus_tag="JNZ89_004758"
     CDS             complement(1124..1501)
                     /locus_tag="JNZ89_004758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000656306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY8938333.1"
                     /translation="MKDYLCKKLFNRLSGTLVIRARCGNNITGLACCNILYPSPRYSG
                     QLHIKELYVSQCDRNKGTGKAIMRFIARLALEQECLSLSWNAEKSNPGANRFYQALGG
                     RINDHIVNYYLHGESLSKLASGI"
BASE COUNT          426 a          352 c          369 g          426 t
ORIGIN      
        1 acaccatcat acactaaatc agtaagttgg cagcatcacc cgacgcactt tgcgccgaat
       61 aaatacctgt gacggaagat cacttcgcag aataaataaa tcctggtgtc cctgttgata
      121 ccgggaagcc ctgggccaac ttttggcgaa aatgagacgt tgatcggcac gtaagaggtt
      181 ccaactttca ccataatgaa ataagatcac taccgggcgt attttttgag ttatcgagat
      241 tttcaggagc taaggaagct aaaatggaga aaaaaatcac tggatatacc accgttgata
      301 tatcccaatg gcatcgtaaa gaacattttg aggcatttca gtcagttgct caatgtacct
      361 ataaccagac cgttcagctg gatattacgg cctttttaaa gaccgtaaag aaaaataagc
      421 acaagtttta tccggccttt attcacattc ttgcccgcct gatgaatgct catccggaat
      481 tccgtatggc aatgaaagac ggtgagctgg tgatatggga tagtgttcac ccttgttaca
      541 ccgttttcca tgagcaaact gaaacgtttt catcgctctg gagtgaatac cacgacgatt
      601 tccggcagtt tctacacata tattcgcaag atgtggcgtg ttacggtgaa aacctggcct
      661 atttccctaa agggtttatt gagaatatgt ttttcgtctc agccaatccc tgggtgagtt
      721 tcaccagttt tgatttaaac gtggccaata tggacaactt cttcgccccc gttttcacca
      781 tgggcaaata ttatacgcaa ggcgacaagg tgctgatgcc gctggcgatt caggttcatc
      841 atgccgtttg tgatggcttc catgtcggca gaatgcttaa tgaattacaa cagtactgcg
      901 atgagtggca gggcggggcg taattttttt aaggcagtta ttggtgccct taaacgcctg
      961 gttgctacgc ctgaataagt gataataagc ggatgaatgg cagaaattcg aaagcaaatt
     1021 cgacccggtc gtcggttcag ggcagggtcg ttaaatagcc gcttatgtct attgctggtt
     1081 taccggttta ttgactaccg gaagcagtgt gaccgtgtgc ttctcaaatg cctgaggcca
     1141 gtttgctcag gctctccccg tggaggtaat aattgacgat atgatcattt attctgcctc
     1201 ccagagcctg ataaaaacgg ttagcgccgg ggttggattt ttcagcgttc cagctaaggc
     1261 taaggcattc ctgttcaagc gcaagccggg ctataaagcg cattatcgct ttacccgtgc
     1321 ccttatttcg atcgcactga gaaacataca gctctttaat atgcagctga ccgctgtatc
     1381 ggggcgaggg ataaagaata ttgcaacatg ccaggccagt aatgttattg ccgcagcgcg
     1441 ctctgatcac cagggtaccg gaaagccggt tgaataactt tttacagaga taatccttca
     1501 tcaacgcttc ctgaatgata ccttcgccat aataggggtc gtctcagaaa acggaaaata
     1561 aagcacgcta agc
//
LOCUS       DADMIB010000473         1528 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.350, whole genome shotgun sequence.
ACCESSION   DADMIB010000473 DADMIB010000000
VERSION     DADMIB010000473.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.350"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            <1..298
                     /locus_tag="JNZ89_004759"
     CDS             <1..298
                     /locus_tag="JNZ89_004759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY8938334.1"
                     /translation="TKGCLIANFATVPGDMGQMVVTILSAVAQAERRRILERTNEGRQ
                     EAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS"
     gene            481..1341
                     /locus_tag="JNZ89_004760"
     CDS             481..1341
                     /locus_tag="JNZ89_004760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032489893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A broad-spectrum beta-lactamase TEM-57"
                     /protein_id="HAY8938335.1"
                     /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGY
                     IELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLDRRIHYSQNDLVE
                     YSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRL
                     DRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPL
                     LRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIA
                     EIGASLIKHW"
BASE COUNT          410 a          344 c          377 g          397 t
ORIGIN      
        1 gacaaaaggc tgcctcatcg ctaactttgc aacagtgccc ggtgatatgg ggcaaatggt
       61 ggtcaccatc ctgtcggctg tggcacaggc tgaacgccgg aggatcctag aacgcacgaa
      121 tgagggccga caggaagcaa agctgaaagg aatcaaattt ggccgcaggc gtaccgtgga
      181 caggaacgtc gtgctgacgc ttcatcagaa gggcactggt gcaacggaaa ttgctcatca
      241 gctcagtatt gcccgctcca cggtttataa aattcttgaa gacgaaaggg cctcgtgata
      301 cgcctatttt tataggttaa tgtcatgata ataatggttt cttagacgtc aggtggcact
      361 tttcggggaa atgtgcgcgg aacccctatt tgtttatttt tctaaataca ttcaaatatg
      421 tatccgctca tgagacaata accctggtaa atgcttcaat aatattgaaa aaggaagagt
      481 atgagtattc aacattttcg tgtcgccctt attccctttt ttgcggcatt ttgccttcct
      541 gtttttgctc acccagaaac gctggtgaaa gtaaaagatg ctgaagatca gttgggtgca
      601 cgagtgggtt acatcgaact ggatctcaac agcggtaaga tccttgagag ttttcgcccc
      661 gaagaacgtt ttccaatgat gagcactttt aaagttctgc tatgtggtgc ggtattatcc
      721 cgtgttgacg ccgggcaaga gcaactcgat cgccgcatac actattctca gaatgacttg
      781 gttgagtact caccagtcac agaaaagcat cttacggatg gcatgacagt aagagaatta
      841 tgcagtgctg ccataaccat gagtgataac actgctgcca acttacttct gacaacgatc
      901 ggaggaccga aggagctaac cgcttttttg cacaacatgg gggatcatgt aactcgcctt
      961 gatcgttggg aaccggagct gaatgaagcc ataccaaacg acgagcgtga caccacgatg
     1021 cctgcagcaa tggcaacaac gttgcgcaaa ctattaactg gcgaactact tactctagct
     1081 tcccggcaac aattaataga ctggatggag gcggataaag ttgcaggacc acttctgcgc
     1141 tcggcccttc cggctggctg gtttattgct gataaatctg gagccggtga gcgtgggtct
     1201 cgcggtatca ttgcagcact ggggccagat ggtaagccct cccgtatcgt agttatctac
     1261 acgacgggga gtcaggcaac tatggatgaa cgaaatagac agatcgctga gataggtgcc
     1321 tcactgatta agcattggta actgtcagac caagtttact catatatact ttagattgat
     1381 ttaaaacttc atttttaatt taaaaggatc taggtgaaga tcctttttga taatctcatg
     1441 accaaaatcc cttaacgtga gttttcgttc cactgagcgt cagaccccgt gtagtgctcc
     1501 tcgatccgca ggtcggactc gtggtaca
//
LOCUS       DADMIB010000474         1119 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.381, whole genome shotgun sequence.
ACCESSION   DADMIB010000474 DADMIB010000000
VERSION     DADMIB010000474.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.381"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            127..942
                     /locus_tag="JNZ89_004761"
     CDS             127..942
                     /locus_tag="JNZ89_004761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /protein_id="HAY8938336.1"
                     /translation="MSHIQRETSCSRPRLNSNMDADLYGYKWARDNVGQSGATIYRLY
                     GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTEFMPLPTIKHFIRTPDDAWLLTTAIP
                     GKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGL
                     VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG
                     RVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
BASE COUNT          298 a          231 c          258 g          332 t
ORIGIN      
        1 atgataagtt tatcaccacc gactatttgc aacagtgccc tctgatgtta cattgcacaa
       61 gataaaaata tatcatcatg aacaataaaa ctgtctgctt acataaacag taatacaagg
      121 ggtgttatga gccatattca acgggaaacg tcttgctcga ggccgcgatt aaattccaac
      181 atggatgctg atttatatgg gtataaatgg gctcgcgata atgtcgggca atcaggtgcg
      241 acaatctatc gattgtatgg gaagcccgat gcgccagagt tgtttctgaa acatggcaaa
      301 ggtagcgttg ccaatgatgt tacagatgag atggtcagac taaactggct gacggaattt
      361 atgcctcttc cgaccatcaa gcattttatc cgtactcctg atgatgcatg gttactcacc
      421 actgcgatcc ccgggaaaac agcattccag gtattagaag aatatcctga ttcaggtgaa
      481 aatattgttg atgcgctggc agtgttcctg cgccggttgc attcgattcc tgtttgtaat
      541 tgtcctttta acagcgatcg cgtatttcgt ctcgctcagg cgcaatcacg aatgaataac
      601 ggtttggttg atgcgagtga ttttgatgac gagcgtaatg gctggcctgt tgaacaagtc
      661 tggaaagaaa tgcataagct tttgccattc tcaccggatt cagtcgtcac tcatggtgat
      721 ttctcacttg ataaccttat ttttgacgag gggaaattaa taggttgtat tgatgttgga
      781 cgagtcggaa tcgcagaccg ataccaggat cttgccatcc tatggaactg cctcggtgag
      841 ttttctcctt cattacagaa acggcttttt caaaaatatg gtattgataa tcctgatatg
      901 aataaattgc agtttcattt gatgctcgat gagtttttct aatcagaatt ggttaattgg
      961 ttgtaacact ggcagagcat tacgctgact tgacgggacg gcgcttccct accctcatgg
     1021 ccgcctccca ggaatcgacc caggtgctta tcgtggacat aatcctttac tcataaattg
     1081 gcactgttgc aaagttagcg atgaggcagc cttttgtct
//
LOCUS       DADMIB010000475         1081 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.386, whole genome shotgun sequence.
ACCESSION   DADMIB010000475 DADMIB010000000
VERSION     DADMIB010000475.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1081
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.386"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            109..939
                     /locus_tag="JNZ89_004762"
     CDS             109..939
                     /locus_tag="JNZ89_004762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032491311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-1"
                     /protein_id="HAY8938337.1"
                     /translation="MKNTIHINFAIFLIIANIIYSSASASTDISTVASPLFEGTEGCF
                     LLYDASTNAEIAQFNKAKCATQMAPDSTFKIALSLMAFDAEIIDQKTIFKWDKTPKGM
                     EIWNSNHTPKTWMQFSVVWVSQEITQKIGLNKIKNYLKDFDYGNQDFSGDKERNNGLT
                     EAWLESSLKISPEEQIQFLRKIINHNLPVKNSAIENTIENMYLQDLDNSTKLYGKTGA
                     GFTANRTLQNGWFEGFIISKSGHKYVFVSALTGNLGSNLTSSIKAKKNAITILNTLNL
                     "
BASE COUNT          399 a          216 c          192 g          274 t
ORIGIN      
        1 acgatgttac gcagcagggc agtcgcccta aaacaaagtt gggcgaaccc ggagcctcat
       61 taattgttag ccgttaaaat taagcccttt accaaaccaa tacttattat gaaaaacaca
      121 atacatatca acttcgctat ttttttaata attgcaaata ttatctacag cagcgccagt
      181 gcatcaacag atatctctac tgttgcatct ccattatttg aaggaactga aggttgtttt
      241 ttactttacg atgcatccac aaacgctgaa attgctcaat tcaataaagc aaagtgtgca
      301 acgcaaatgg caccagattc aactttcaag atcgcattat cacttatggc atttgatgcg
      361 gaaataatag atcagaaaac catattcaaa tgggataaaa cccccaaagg aatggagatc
      421 tggaacagca atcatacacc aaagacgtgg atgcaatttt ctgttgtttg ggtttcgcaa
      481 gaaataaccc aaaaaattgg attaaataaa atcaagaatt atctcaaaga ttttgattat
      541 ggaaatcaag acttctctgg agataaagaa agaaacaacg gattaacaga agcatggctc
      601 gaaagtagct taaaaatttc accagaagaa caaattcaat tcctgcgtaa aattattaat
      661 cacaatctcc cagttaaaaa ctcagccata gaaaacacca tagagaacat gtatctacaa
      721 gatctggata atagtacaaa actgtatggg aaaactggtg caggattcac agcaaataga
      781 accttacaaa acggatggtt tgaagggttt attataagca aatcaggaca taaatatgtt
      841 tttgtgtccg cacttacagg aaacttgggg tcgaatttaa catcaagcat aaaagccaag
      901 aaaaatgcga tcaccattct aaacacacta aatttataaa aaatctaatg gcaaaatcgc
      961 ccaacccttc aatcaagtcg ggacggccaa aagcaagctt ttggctcccc tcgctggcgc
     1021 tcggcgcccc ttatttcaaa cgttaaacat catgagggaa gtggtgatcg ccgaagtatc
     1081 g
//
LOCUS       DADMIB010000476          862 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.410, whole genome shotgun sequence.
ACCESSION   DADMIB010000476 DADMIB010000000
VERSION     DADMIB010000476.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.410"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            11..802
                     /gene="aadA1"
                     /locus_tag="JNZ89_004763"
     CDS             11..802
                     /gene="aadA1"
                     /locus_tag="JNZ89_004763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA1"
                     /protein_id="HAY8938338.1"
                     /translation="MREVVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
                     HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPA
                     QYQPVILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
BASE COUNT          212 a          213 c          241 g          196 t
ORIGIN      
        1 gttaaacatc atgagggaag tggtgatcgc cgaagtatcg actcaactat cagaggtagt
       61 tggcgtcatc gagcgccatc tcgaaccgac gttgctggcc gtacatttgt acggctccgc
      121 agtggatggc ggcctgaagc cacacagtga tattgatttg ctggttacgg tgaccgtaag
      181 gcttgatgaa acaacgcggc gagctttgat caacgacctt ttggaaactt cggcttcccc
      241 tggagagagc gagattctcc gcgctgtaga agtcaccatt gttgtgcacg acgacatcat
      301 tccgtggcgt tatccagcta agcgcgaact gcaatttgga gaatggcagc gcaatgacat
      361 tcttgcaggt atcttcgagc cagccacgat cgacattgat ctggctatct tgctgacaaa
      421 agcaagagaa catagcgttg ccttggtagg tccagcggcg gaggaactct ttgatccggt
      481 tcctgaacag gatctatttg aggcgctaaa tgaaacctta acgctatgga actcgccgcc
      541 cgactgggct ggcgatgagc gaaatgtagt gcttacgttg tcccgcattt ggtacagcgc
      601 agtaaccggc aaaatcgcgc cgaaggatgt cgctgccgac tgggcaatgg agcgcctgcc
      661 ggcccagtat cagcccgtca tacttgaagc tagacaggct tatcttggac aagaagaaga
      721 tcgcttggcc tcgcgcgcag atcagttgga agaatttgtt cactacgtga aaggcgagat
      781 caccaaggta gtcggcaaat aatgtctaac aattcgttca agccgacgcc gcttcgcggc
      841 gcggcttaac tcaagcgtta ga
//
LOCUS       DADMIB010000477          859 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H113140272
            SAMEA1570843-rid11410603.guided.412, whole genome shotgun sequence.
ACCESSION   DADMIB010000477 DADMIB010000000
VERSION     DADMIB010000477.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570843
            Sequence Read Archive: ERR182114
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941104.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941104.1
            Genome Coverage       :: 59x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 04:49:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,764
            CDSs (total)                      :: 4,680
            Genes (coding)                    :: 4,342
            CDSs (with protein)               :: 4,342
            Genes (RNA)                       :: 84
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (5S)
            partial rRNAs                     :: 1, 2 (16S, 23S)
            tRNAs                             :: 74
            ncRNAs                            :: 6
            Pseudo Genes (total)              :: 338
            CDSs (without protein)            :: 338
            Pseudo Genes (ambiguous residues) :: 0 of 338
            Pseudo Genes (frameshifted)       :: 186 of 338
            Pseudo Genes (incomplete)         :: 89 of 338
            Pseudo Genes (internal stop)      :: 104 of 338
            Pseudo Genes (multiple problems)  :: 38 of 338
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570843-rid11410603.guided.412"
                     /strain="H113140272"
                     /db_xref="taxon:621"
     gene            11..799
                     /gene="aadA1"
                     /locus_tag="JNZ89_004764"
     CDS             11..799
                     /gene="aadA1"
                     /locus_tag="JNZ89_004764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA1"
                     /protein_id="HAY8938339.1"
                     /translation="MREVVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
                     HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPA
                     QYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK"
BASE COUNT          209 a          213 c          241 g          196 t
ORIGIN      
        1 gttaaacatc atgagggaag tggtgatcgc cgaagtatcg actcaactat cagaggtagt
       61 tggcgtcatc gagcgccatc tcgaaccgac gttgctggcc gtacatttgt acggctccgc
      121 agtggatggc ggcctgaagc cacacagtga tattgatttg ctggttacgg tgaccgtaag
      181 gcttgatgaa acaacgcggc gagctttgat caacgacctt ttggaaactt cggcttcccc
      241 tggagagagc gagattctcc gcgctgtaga agtcaccatt gttgtgcacg acgacatcat
      301 tccgtggcgt tatccagcta agcgcgaact gcaatttgga gaatggcagc gcaatgacat
      361 tcttgcaggt atcttcgagc cagccacgat cgacattgat ctggctatct tgctgacaaa
      421 agcaagagaa catagcgttg ccttggtagg tccagcggcg gaggaactct ttgatccggt
      481 tcctgaacag gatctatttg aggcgctaaa tgaaacctta acgctatgga actcgccgcc
      541 cgactgggct ggcgatgagc gaaatgtagt gcttacgttg tcccgcattt ggtacagcgc
      601 agtaaccggc aaaatcgcgc cgaaggatgt cgctgccgac tgggcaatgg agcgcctgcc
      661 ggcccagtat cagcccgtca tacttgaagc taggcaggct tatcttggac aagaagatcg
      721 cttggcctcg cgcgcagatc agttggaaga atttgttcac tacgtgaaag gcgagatcac
      781 caaggtagtc ggcaaataat gtctaacaat tcgttcaagc cgacgccgct tcgcggcgcg
      841 gcttaactca agcgttaga
//
